LOCUS       DADKRT010000001        82847 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.001, whole genome shotgun sequence.
ACCESSION   DADKRT010000001 DADKRT010000000
VERSION     DADKRT010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 82847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 82847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..82847
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.001"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1625
                     /locus_tag="JQ356_000001"
     CDS             <1..1625
                     /locus_tag="JQ356_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY4620217.1"
                     /translation="NNGSQVNVTDSSLVSDTIGLTNGSSLNIGANGVVATDHLTVDSY
                     STVNLTESTGWNNYSNLYTNTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHN
                     GNVISGVFDINSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNG
                     TELDNSSVDNVVAATGNYKVRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKAD
                     LGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGL
                     ADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGD
                     MNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNS
                     DAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELG
                     VDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSF
                     TKNFSAYTDANYLGGGDVDQDWSANVGVKYTW"
     gene            1713..2336
                     /gene="iprA"
                     /locus_tag="JQ356_000002"
     CDS             1713..2336
                     /gene="iprA"
                     /locus_tag="JQ356_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide resistance inhibitor IprA"
                     /protein_id="HAY4620218.1"
                     /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDT
                     FFILEGVISLRREENVLIGITQASYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT
                     ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI
                     GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY"
     gene            complement(2337..3494)
                     /locus_tag="JQ356_000003"
     CDS             complement(2337..3494)
                     /locus_tag="JQ356_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-12 family class D beta-lactamase AmpH"
                     /protein_id="HAY4620219.1"
                     /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
                     GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK
                     DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
                     SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF
                     ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
     gene            3846..5066
                     /gene="sbmA"
                     /locus_tag="JQ356_000004"
     CDS             3846..5066
                     /gene="sbmA"
                     /locus_tag="JQ356_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HAY4620220.1"
                     /translation="MFKSFFPKPGAFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ
                     IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
                     HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLVA
                     FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
                     AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
                     LDGDKIQEVTHTLS"
     gene            5079..6173
                     /gene="yaiW"
                     /locus_tag="JQ356_000005"
     CDS             5079..6173
                     /gene="yaiW"
                     /locus_tag="JQ356_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HAY4620221.1"
                     /translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
                     KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA
                     WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
                     GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
                     NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
                     LATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
                     QLESPKITRNLTTAWFAKRVDERRARCMKQ"
     gene            complement(6232..6540)
                     /locus_tag="JQ356_000006"
     CDS             complement(6232..6540)
                     /locus_tag="JQ356_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2755 family protein"
                     /protein_id="HAY4620222.1"
                     /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
                     LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ
                     "
     gene            6800..7012
                     /locus_tag="JQ356_000007"
     CDS             6800..7012
                     /locus_tag="JQ356_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414914.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 family protein"
                     /protein_id="HAY4620223.1"
                     /translation="MNLPVKIRRDWHYYAFAIGLIFILNGAVGLLGFEAKGWQTYAVG
                     LVTWVISFWLAGLIIRRRDEETENAQ"
     gene            complement(7036..8130)
                     /gene="ddlA"
                     /locus_tag="JQ356_000008"
     CDS             complement(7036..8130)
                     /gene="ddlA"
                     /locus_tag="JQ356_000008"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY4620224.1"
                     /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
                     KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPSKHEHQLIDAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
                     LTRANRHNISFAEVESKLRLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
                     IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
                     EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLITRLIELALERHAADNALKTTM"
     gene            8208..8365
                     /locus_tag="JQ356_000009"
                     /pseudo
     CDS             8208..8365
                     /locus_tag="JQ356_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8592..8852
                     /gene="iraP"
                     /locus_tag="JQ356_000010"
     CDS             8592..8852
                     /gene="iraP"
                     /locus_tag="JQ356_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HAY4620225.1"
                     /translation="MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
                     QQRLIEQVEGALYEVKPDASIPDDDTELLRNYVKKLLKHPRQ"
     gene            8953..10368
                     /gene="phoA"
                     /locus_tag="JQ356_000011"
     CDS             8953..10368
                     /gene="phoA"
                     /locus_tag="JQ356_000011"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HAY4620226.1"
                     /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA
                     RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL
                     TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA
                     AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL
                     NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNAVTEANQQKP
                     LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK
                     NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKDGNTLVIVTADH
                     AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN
                     VVGLTDQTDLFYTMKAALGLK"
     gene            10487..10807
                     /gene="psiF"
                     /locus_tag="JQ356_000012"
     CDS             10487..10807
                     /gene="psiF"
                     /locus_tag="JQ356_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
                     /protein_id="HAY4620227.1"
                     /translation="MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA
                     LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL
                     KKAA"
     gene            10909..12024
                     /gene="adrA"
                     /locus_tag="JQ356_000013"
                     /gene_synonym="dgcC"
     CDS             10909..12024
                     /gene="adrA"
                     /locus_tag="JQ356_000013"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HAY4620228.1"
                     /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
                     RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL
                     KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL
                     TGITVSFNSAPLEWWLSLPIIVVYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV
                     YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ
                     ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVREGLNTLRLPNTPQVTLRISVG
                     VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
     gene            complement(12041..12850)
                     /gene="proC"
                     /locus_tag="JQ356_000014"
     CDS             complement(12041..12850)
                     /gene="proC"
                     /locus_tag="JQ356_000014"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HAY4620229.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPNKVAA
                     LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL
                     DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
                     GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
     gene            12970..13428
                     /locus_tag="JQ356_000015"
     CDS             12970..13428
                     /locus_tag="JQ356_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HAY4620230.1"
                     /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
                     IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI
                     RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG"
     gene            13611..14135
                     /gene="aroL"
                     /locus_tag="JQ356_000016"
     CDS             13611..14135
                     /gene="aroL"
                     /locus_tag="JQ356_000016"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HAY4620231.1"
                     /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
                     VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA
                     PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
                     ISEIRSALAQTINC"
     gene            14185..14376
                     /gene="yaiA"
                     /locus_tag="JQ356_000017"
     CDS             14185..14376
                     /gene="yaiA"
                     /locus_tag="JQ356_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HAY4620232.1"
                     /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
                     PTAQEAMDAKKRYEDPDKE"
     gene            14634..15311
                     /locus_tag="JQ356_000018"
     CDS             14634..15311
                     /locus_tag="JQ356_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
                     /protein_id="HAY4620233.1"
                     /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
                     VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
                     SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
                     GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
                     LAAELLV"
     gene            15383..15667
                     /gene="ppnP"
                     /locus_tag="JQ356_000019"
     CDS             15383..15667
                     /gene="ppnP"
                     /locus_tag="JQ356_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HAY4620234.1"
                     /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
                     MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            15815..16156
                     /locus_tag="JQ356_000020"
                     /pseudo
     CDS             15815..16156
                     /locus_tag="JQ356_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308469.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing protein"
     gene            16153..16236
                     /locus_tag="JQ356_000021"
     CDS             16153..16236
                     /locus_tag="JQ356_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620235.1"
                     /translation="MTQRPWSKLQHKTHNIAALKIIVRRSE"
     gene            complement(16314..17225)
                     /gene="rdgC"
                     /locus_tag="JQ356_000022"
     CDS             complement(16314..17225)
                     /gene="rdgC"
                     /locus_tag="JQ356_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HAY4620236.1"
                     /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
                     WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
                     ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQNLIEGLGGEAQR"
     gene            17350..18259
                     /gene="mak"
                     /locus_tag="JQ356_000023"
                     /pseudo
     CDS             17350..18259
                     /gene="mak"
                     /locus_tag="JQ356_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414928.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
     gene            complement(18358..19590)
                     /gene="araJ"
                     /locus_tag="JQ356_000024"
     CDS             complement(18358..19590)
                     /gene="araJ"
                     /locus_tag="JQ356_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
                     /protein_id="HAY4620237.1"
                     /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI
                     SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
                     FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF
                     LLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGNAGVFAW
                     FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV
                     LALLMFFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
                     LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAGE
                     TTGVGYSLGVHYLLPDAA"
     gene            complement(19716..22859)
                     /gene="sbcC"
                     /locus_tag="JQ356_000025"
     CDS             complement(19716..22859)
                     /gene="sbcC"
                     /locus_tag="JQ356_000025"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HAY4620238.1"
                     /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
                     NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQV
                     QSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKA
                     QPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHA
                     AKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
                     EQKLNALAAITLTLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
                     NGSLEQTQRNVALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
                     CGSTSHPAVKAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
                     AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHKRQLRLLSQRHELQGQ
                     IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
                     ELTTLQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
                     VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT
                     LVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
                     DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
                     TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH
                     KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK
                     KINGLGYSKLESTFAVK"
     gene            complement(22856..24058)
                     /gene="sbcD"
                     /locus_tag="JQ356_000026"
     CDS             complement(22856..24058)
                     /gene="sbcD"
                     /locus_tag="JQ356_000026"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HAY4620239.1"
                     /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
                     VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
                     TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIISSQAGLNGIEKQQHLLAAITDY
                     YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI
                     ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
                     QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALAESLPVE
                     VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH
                     TLAGEHEA"
     gene            24248..24937
                     /gene="phoB"
                     /locus_tag="JQ356_000027"
     CDS             24248..24937
                     /gene="phoB"
                     /locus_tag="JQ356_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HAY4620240.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE
                     PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
                     RGTGYRFSTRF"
     gene            24995..26290
                     /gene="phoR"
                     /locus_tag="JQ356_000028"
     CDS             24995..26290
                     /gene="phoR"
                     /locus_tag="JQ356_000028"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HAY4620241.1"
                     /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
                     FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTQLLNE
                     KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
                     EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
     gene            26697..28016
                     /gene="brnQ"
                     /locus_tag="JQ356_000029"
     CDS             26697..28016
                     /gene="brnQ"
                     /locus_tag="JQ356_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter carrier
                     protein BrnQ"
                     /protein_id="HAY4620242.1"
                     /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
                     TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG
                     GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS
                     QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
                     SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAVGRQVTSSAH"
     gene            28092..29465
                     /gene="proY"
                     /locus_tag="JQ356_000030"
     CDS             28092..29465
                     /gene="proY"
                     /locus_tag="JQ356_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HAY4620243.1"
                     /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
                     IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
                     VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
                     RQLAENQ"
     gene            29621..31343
                     /gene="malZ"
                     /locus_tag="JQ356_000031"
                     /pseudo
     CDS             29621..31343
                     /gene="malZ"
                     /locus_tag="JQ356_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706291.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
     gene            complement(31348..31929)
                     /gene="acpH"
                     /locus_tag="JQ356_000032"
     CDS             complement(31348..31929)
                     /gene="acpH"
                     /locus_tag="JQ356_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HAY4620244.1"
                     /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM
                     HRRIDVLTDNLPEVREAREWFRRETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFI
                     CYARKQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR
                     DSWYDLNAHYTALGTRFWQFYPRMMAQASHKAL"
     gene            32022..33092
                     /gene="queA"
                     /locus_tag="JQ356_000033"
     CDS             32022..33092
                     /gene="queA"
                     /locus_tag="JQ356_000033"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HAY4620245.1"
                     /translation="MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTSVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGAELLLGDDESINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
                     TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
                     FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
                     FSYGDAMFITYNPQAINERVGE"
     gene            33148..34275
                     /gene="tgt"
                     /locus_tag="JQ356_000034"
     CDS             33148..34275
                     /gene="tgt"
                     /locus_tag="JQ356_000034"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HAY4620246.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
     gene            34298..34630
                     /gene="yajC"
                     /locus_tag="JQ356_000035"
     CDS             34298..34630
                     /gene="yajC"
                     /locus_tag="JQ356_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HAY4620247.1"
                     /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            34658..36505
                     /gene="secD"
                     /locus_tag="JQ356_000036"
     CDS             34658..36505
                     /gene="secD"
                     /locus_tag="JQ356_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HAY4620248.1"
                     /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
                     ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
                     LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
     gene            36516..37487
                     /gene="secF"
                     /locus_tag="JQ356_000037"
     CDS             36516..37487
                     /gene="secF"
                     /locus_tag="JQ356_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HAY4620249.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
                     GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGEDLTQTGAMALMAALLSILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            37616..37963
                     /locus_tag="JQ356_000038"
     CDS             37616..37963
                     /locus_tag="JQ356_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HAY4620250.1"
                     /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
                     PFADLKAMMNKKK"
     gene            complement(38140..39024)
                     /locus_tag="JQ356_000039"
     CDS             complement(38140..39024)
                     /locus_tag="JQ356_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HAY4620251.1"
                     /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
                     YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
                     EPRFSIDKLTNTDLNFGPFKEWYFANNYIYDMGRNKNGRQSTWYMGLGTDIDTDLPMS
                     LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
                     DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN
                     FNVRSTGWGGYLVVGYNF"
     gene            complement(39323..39862)
                     /locus_tag="JQ356_000040"
     CDS             complement(39323..39862)
                     /locus_tag="JQ356_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HAY4620252.1"
                     /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN
                     QETVKITQQNRLNAKSSSGGYLLPGAKTPARLESQIGTLRMSLVNITPDTDGTTLTLR
                     IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG
                     ISVDQLGFVRIHDIQPVMQ"
     gene            40013..40462
                     /gene="nrdR"
                     /locus_tag="JQ356_000041"
     CDS             40013..40462
                     /gene="nrdR"
                     /locus_tag="JQ356_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HAY4620253.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
     gene            40466..41569
                     /gene="ribD"
                     /locus_tag="JQ356_000042"
     CDS             40466..41569
                     /gene="ribD"
                     /locus_tag="JQ356_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HAY4620254.1"
                     /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
                     RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD
                     PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
                     TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL
                     YPQQNLRQPVRIVIDSQNRVTPEHHIVQQPGETWFARTQEDSREWPETVRTLLIPEHK
                     GHLDLVVLMMQLGKQQINSIWGEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC
                     TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
     gene            41658..42128
                     /gene="ribE"
                     /locus_tag="JQ356_000043"
     CDS             41658..42128
                     /gene="ribE"
                     /locus_tag="JQ356_000043"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HAY4620255.1"
                     /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
                     KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
                     HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            42148..42567
                     /gene="nusB"
                     /locus_tag="JQ356_000044"
     CDS             42148..42567
                     /gene="nusB"
                     /locus_tag="JQ356_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HAY4620256.1"
                     /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
                     AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            42645..43622
                     /gene="thiL"
                     /locus_tag="JQ356_000045"
     CDS             42645..43622
                     /gene="thiL"
                     /locus_tag="JQ356_000045"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HAY4620257.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
                     FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
                     PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
                     SDLGHIVKASDCGVRIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR
                     GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP"
     gene            43600..44118
                     /gene="pgpA"
                     /locus_tag="JQ356_000046"
     CDS             43600..44118
                     /gene="pgpA"
                     /locus_tag="JQ356_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HAY4620258.1"
                     /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGILS"
     gene            complement(44172..45146)
                     /gene="yajO"
                     /locus_tag="JQ356_000047"
     CDS             complement(44172..45146)
                     /gene="yajO"
                     /locus_tag="JQ356_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxyxylulose-5-phosphate synthase YajO"
                     /protein_id="HAY4620259.1"
                     /translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR
                     LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
                     PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK"
     gene            complement(45201..47063)
                     /gene="dxs"
                     /locus_tag="JQ356_000048"
     CDS             complement(45201..47063)
                     /gene="dxs"
                     /locus_tag="JQ356_000048"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HAY4620260.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
                     FEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
                     KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
                     STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
                     PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI
                     LNFGTLMPEAAKVAESLNATLVDMRFVKPLDETLILEMAASHEALVTVEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
     gene            complement(47088..47987)
                     /gene="ispA"
                     /locus_tag="JQ356_000049"
     CDS             complement(47088..47987)
                     /gene="ispA"
                     /locus_tag="JQ356_000049"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HAY4620261.1"
                     /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
                     KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     VKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQAL
                     DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ
                     LAEQSPDTSALEALADYIIQRNK"
     gene            complement(47987..48229)
                     /gene="xseB"
                     /locus_tag="JQ356_000050"
     CDS             complement(47987..48229)
                     /gene="xseB"
                     /locus_tag="JQ356_000050"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015571292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HAY4620262.1"
                     /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
     gene            48435..49883
                     /gene="thiI"
                     /locus_tag="JQ356_000051"
     CDS             48435..49883
                     /gene="thiI"
                     /locus_tag="JQ356_000051"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HAY4620263.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL
                     EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIALQTE
                     QEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNR
                     TWLLWCERGVMSRLQALYLREQGFNNVKVYRP"
     gene            complement(49937..50527)
                     /gene="yajL"
                     /locus_tag="JQ356_000052"
     CDS             complement(49937..50527)
                     /gene="yajL"
                     /locus_tag="JQ356_000052"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HAY4620264.1"
                     /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA
                     ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV
                     AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLQVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(50490..51401)
                     /gene="panE"
                     /locus_tag="JQ356_000053"
     CDS             complement(50490..51401)
                     /gene="panE"
                     /locus_tag="JQ356_000053"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HAY4620265.1"
                     /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSANLVET
                     DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT
                     IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
                     PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
                     GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
                     ENTRLFEMVKRKESEYERIGTGLPRPW"
     gene            51569..52060
                     /gene="yajQ"
                     /locus_tag="JQ356_000054"
     CDS             51569..52060
                     /gene="yajQ"
                     /locus_tag="JQ356_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414960.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide binding protein YajQ"
                     /protein_id="HAY4620266.1"
                     /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA
                     SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
                     ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
                     FRD"
     gene            complement(52188..53552)
                     /locus_tag="JQ356_000055"
     CDS             complement(52188..53552)
                     /locus_tag="JQ356_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4620267.1"
                     /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH
                     KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK
                     MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPA
                     YVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFDVEQA
                     IRQA"
     gene            complement(53701..54591)
                     /gene="cyoE"
                     /locus_tag="JQ356_000056"
     CDS             complement(53701..54591)
                     /gene="cyoE"
                     /locus_tag="JQ356_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HAY4620268.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
                     ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS
                     VMMSVDFMVPDSHTLLAAVW"
     gene            complement(54603..54932)
                     /locus_tag="JQ356_000057"
     CDS             complement(54603..54932)
                     /locus_tag="JQ356_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HAY4620269.1"
                     /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
                     VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIITILVVGSIWIMWNL
                     NYNMMMH"
     gene            complement(54932..55546)
                     /locus_tag="JQ356_000058"
     CDS             complement(54932..55546)
                     /locus_tag="JQ356_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HAY4620270.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
                     ALTCLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
     gene            complement(55536..57527)
                     /gene="cyoB"
                     /locus_tag="JQ356_000059"
     CDS             complement(55536..57527)
                     /gene="cyoB"
                     /locus_tag="JQ356_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HAY4620271.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
                     GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG
                     ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWANSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT
                     WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN"
     gene            complement(57549..58496)
                     /gene="cyoA"
                     /locus_tag="JQ356_000060"
     CDS             complement(57549..58496)
                     /gene="cyoA"
                     /locus_tag="JQ356_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HAY4620272.1"
                     /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATPDRAEFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD
                     VINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH"
     gene            complement(58957..60432)
                     /gene="ampG"
                     /locus_tag="JQ356_000061"
     CDS             complement(58957..60432)
                     /gene="ampG"
                     /locus_tag="JQ356_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HAY4620273.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
                     SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
                     VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
                     LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
     gene            complement(60476..61054)
                     /locus_tag="JQ356_000062"
     CDS             complement(60476..61054)
                     /locus_tag="JQ356_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY4620274.1"
                     /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT
                     VSINGADQRTDQALAKVTRDNQIVTLAASRDLRFLLQEVLEKQMTARGYMVGPNGPVN
                     LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKITKNYRASYNVEGAFQASNK
                     NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR"
     gene            61359..61676
                     /gene="bolA"
                     /locus_tag="JQ356_000063"
     CDS             61359..61676
                     /gene="bolA"
                     /locus_tag="JQ356_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HAY4620275.1"
                     /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG
                     SIA"
     gene            62020..63318
                     /gene="tig"
                     /locus_tag="JQ356_000064"
     CDS             62020..63318
                     /gene="tig"
                     /locus_tag="JQ356_000064"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HAY4620276.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
                     FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDSAVEA
                     EDRVTIDFTGSVDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
                     ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
     gene            63563..64186
                     /gene="clpP"
                     /locus_tag="JQ356_000065"
     CDS             63563..64186
                     /gene="clpP"
                     /locus_tag="JQ356_000065"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HAY4620277.1"
                     /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            64312..65586
                     /gene="clpX"
                     /locus_tag="JQ356_000066"
     CDS             64312..65586
                     /gene="clpX"
                     /locus_tag="JQ356_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HAY4620278.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
                     KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
     gene            65774..68128
                     /gene="lon"
                     /locus_tag="JQ356_000067"
     CDS             65774..68128
                     /gene="lon"
                     /locus_tag="JQ356_000067"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HAY4620279.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADNENCVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            68337..68609
                     /gene="hupB"
                     /locus_tag="JQ356_000068"
     CDS             68337..68609
                     /gene="hupB"
                     /locus_tag="JQ356_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HAY4620280.1"
                     /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            68801..70672
                     /gene="ppiD"
                     /locus_tag="JQ356_000069"
     CDS             68801..70672
                     /gene="ppiD"
                     /locus_tag="JQ356_000069"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY4620281.1"
                     /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
                     VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
                     QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
                     EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
                     KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
                     KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
                     DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG
                     INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
                     DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN
                     VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            70823..71194
                     /locus_tag="JQ356_000070"
     CDS             70823..71194
                     /locus_tag="JQ356_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620282.1"
                     /translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA
                     QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED
                     LKQVPGMGNSLVERNLAVLTL"
     gene            71288..71686
                     /locus_tag="JQ356_000071"
     CDS             71288..71686
                     /locus_tag="JQ356_000071"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HAY4620283.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM
                     TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA
                     LITFVCIDLKTQKALALEGELREKLEQMVK"
     gene            complement(71738..72433)
                     /gene="queC"
                     /locus_tag="JQ356_000072"
     CDS             complement(71738..72433)
                     /gene="queC"
                     /locus_tag="JQ356_000072"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HAY4620284.1"
                     /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID
                     VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
                     MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKP
                     TVMAAMKQKTGLR"
     gene            complement(72498..74187)
                     /locus_tag="JQ356_000073"
                     /pseudo
     CDS             complement(72498..74187)
                     /locus_tag="JQ356_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308526.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
     gene            74287..75042
                     /gene="cof"
                     /locus_tag="JQ356_000074"
     CDS             74287..75042
                     /gene="cof"
                     /locus_tag="JQ356_000074"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HAY4620285.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR
                     HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM
                     HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI
                     QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE
                     MLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRN"
     gene            75258..75716
                     /locus_tag="JQ356_000075"
     CDS             75258..75716
                     /locus_tag="JQ356_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HAY4620286.1"
                     /translation="MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLED
                     DGILIGKVALLDPEKIGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGE
                     YDYLMRVQVADMKRYDEFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE"
     gene            75746..77518
                     /locus_tag="JQ356_000076"
     CDS             75746..77518
                     /locus_tag="JQ356_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HAY4620287.1"
                     /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD
                     GVTEQHFTTGQILMWIATMVLIAVVVYFLRYVWRVLLFGASYQLAVELREDYYRQLSR
                     QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL
                     TLFALLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
                     QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ
                     LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE
                     LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD
                     IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS
                     VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE
                     HQILHNLRQWGQGRTVIISAHRLSALTEASENIVMQHGHIAQRGNHDELAQQSGWYRD
                     MYRYQQLEAALDDAPEIREEAVDA"
     gene            77511..79292
                     /locus_tag="JQ356_000077"
     CDS             77511..79292
                     /locus_tag="JQ356_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HAY4620288.1"
                     /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL
                     LISYFIDNMVAKNNLPLKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT
                     DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM
                     FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
                     QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS
                     GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDR
                     PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP
                     LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL
                     ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID
                     SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG
                     RYWQMYQLQLAGEELAASVREEESLSA"
     gene            79473..79811
                     /gene="glnK"
                     /locus_tag="JQ356_000078"
     CDS             79473..79811
                     /gene="glnK"
                     /locus_tag="JQ356_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HAY4620289.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
                     RTGEADEAAL"
     gene            79841..81127
                     /gene="amtB"
                     /locus_tag="JQ356_000079"
     CDS             79841..81127
                     /gene="amtB"
                     /locus_tag="JQ356_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter AmtB"
                     /protein_id="HAY4620290.1"
                     /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
                     MTIPGIALFYGGLIRGKNVLSMLMQVTVTFALVCILWVVYGYSLAFGEGNNFFGNVNW
                     LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL
                     SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
                     KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC
                     DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA
                     FIGYKLADLTVGLRVPEEQELEGLDVNSHGENAYNA"
     gene            complement(81176..82036)
                     /gene="tesB"
                     /locus_tag="JQ356_000080"
     CDS             complement(81176..82036)
                     /gene="tesB"
                     /locus_tag="JQ356_000080"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HAY4620291.1"
                     /translation="MSQALKNLLALLNLEKIEAGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
                     RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
                     VQEGVMRNHN"
     gene            82254..82826
                     /locus_tag="JQ356_000081"
     CDS             82254..82826
                     /locus_tag="JQ356_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY4620292.1"
                     /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA
                     IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV
                     LPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINKGGTKADLTLVPVQQTAVPV
                     QASGGATTTVPSTSPTQVNPSSAVPAPTQY"
BASE COUNT        20081 a        20530 c        22167 g        20069 t
ORIGIN      
        1 taaataatgg ctctcaggta aatgttactg attcctctct ggtatcagat accattggtt
       61 taaccaacgg ttcttcactg aatattggtg caaatggcgt ggttgctaca gaccacctga
      121 ctgttgatag ctacagtacc gttaatttaa ccgaatctac cggttggaat aattattcta
      181 atctgtatac caatactatc actgtgacta acggtggtgt gctggatgtg aatgttgatc
      241 agttcgatac tgaagctttc cgtactgata aactggaact gaccagcggc aacattgctg
      301 accataatgg caacgtaatt tctggtgtgt tcgacatcaa cagcagcgat tacgttctga
      361 acgctgatct ggtgaacgac cgtacgtggg atacttccaa gtctaactac ggttacggta
      421 ttgttgctat gaactctgat ggtcacctga ctatcaatgg taacggcgac gtagacaacg
      481 gtactgaact ggataacagc tctgttgata acgttgttgc tgcaaccggt aactacaaag
      541 ttcgtatcga caacgcaact ggcgctggca ctatcgctga ttacaaagat aaagaactta
      601 ttcgggtaaa cgacgctaac accaacgcga ccttctctgc tgctaacaaa gctgacctgg
      661 gtgcatacac ctatcaggct gaacagcgcg gtaacaccgt tgttctgcaa cagatggagc
      721 tgaccgacta cgctaacatg gcgctgagca tcccgtctgc gaacaccaat atctggaacc
      781 tggaacaaga caccgttggt actcgtctga ccaactctcg tcatggcctg gctgataacg
      841 gcggcgcatg ggtaagctac ttcggtggta acttcaacgg cgacaacggc accatcaact
      901 atgatcagga tgttaacggc atcatggtcg gtgttgatac caaaattgac ggtaacaacg
      961 ctaagtggat cgtcggtgcg gctgcaggct tcgctaaagg tgacatgaat gaccgttctg
     1021 gtcaggtgga tcaagacagc cagactgcct acatctactc ttctgctcac ttcgcgaaca
     1081 acgtctttgt tgatggtagc ttgagctact ctcacttcaa caacgacctg tctgcaacca
     1141 tgagcaacgg tacttacgtt gacggtagca ccaactctga cgcgtggggc ttcggtttga
     1201 aagccggtta cgacttcaaa ctgggtgatg ctggttacga gactccttac ggcagcgttt
     1261 ctggtctgtt ccagtctggt gatgactacc agctgagcaa cgacatgaaa gttgacggtc
     1321 agtcttacga cagcatgcgt tatgaactgg gtgtagatgc aggttatacc ttcacctaca
     1381 gcgaagatca ggctctgact ccgtacttca aactggctta cgtctacgac gactcaaaca
     1441 acgataacga tgtgaacggt gattccatcg ataacggtac tgaagggtct gcggtacgtg
     1501 ttggtctggg tactcagttc agcttcacca agaacttcag cgcctatacc gatgctaact
     1561 acctcggtgg tggtgacgta gatcaagact ggtccgcgaa cgtgggtgtt aaatatactt
     1621 ggtaatattc ttcactccga agaaattctg gtaatttaat ctaaataatg cccgtcaagg
     1681 atttgacggg cattactgca aaggacgcgc aaatgttatc tgtagttaaa cctcttcagg
     1741 aatttggtaa gctcgataaa tgtttgtcca gatacggtac gcgcttcgag tttaataatg
     1801 aaaagcaagt tatattttcc agtgatgtca atagcgaaga tactttcttt attttagagg
     1861 gcgttatctc tctgcgtaga gaagaaaacg tacttatcgg tattacccag gcttcttata
     1921 ttatggggct ggctgatggt ttaatgaaaa acgatatacc atacaaatta atatcagaag
     1981 gaaattgtac gggatatcat ctaccagcca aacaaaccat tacgcttatt gaacaaaatc
     2041 aactctggcg agacgctttt tactggttag cctggcaaaa tagaattctg gaattacgcg
     2101 acgtgcagct cattgggcat aattcctacg aacaaatccg cgcaacatta ttatcaatga
     2161 ttgactggaa tgaagaattg cgatcacgta ttggtgtgat gaattatatc catcaacgta
     2221 cacgcatatc gcgttctgtc gtcgcagaag ttctcgctgc tttgcgtaaa ggcggctata
     2281 tcgaaatgaa taaaggcaaa ctggtcgcta tcaaccgttt gccttcagag tattaatcag
     2341 gatgcaggga taaccaacgg tttattcccg cttagctcgg tcaccagatc attgatgcca
     2401 tcgctcatat ttttaaagcg cgtcaacggc gaacgagtga ccaccacaaa cgcgccaata
     2461 ttcttctgcg ggatcatcgc catataggta atgaaaccgc caccaccgcc tgtcttctga
     2521 ataatccccg gacgaccctc tttcggggcc atatataccc agcctaaacc aagcgcatcc
     2581 gctttgccgg ggacatccat gccaatcact ttggtaaact gcgcgcgctg ataaatcaac
     2641 gtctgcatgc gatctgcctg gttactgcgc tgataaaaat cagatgataa atactgctgc
     2701 atccagcgca tcatatcgcc aggcgtggaa tagacgccgc cgctgccaat tgccgccagc
     2761 gtgttattgc acggactggc accgcgctca gcaaccatta aacggcggca ctgatccggt
     2821 gagggggtgt aggtggtgtc tttcatcccc aatggacggg taatctgctc ttcaaacaac
     2881 tgggtataag gcttgccgga cgcattcgcc agtgcatctg ccagcaggtc gaacgcaagg
     2941 ttagagtacg ccgcctgact gcctggcgcg gctttcagct tcgccgtaga aaggtatttc
     3001 cagcgttgct cgcgcgttgg ccagacaaac accggacgat gtgccgcgcc accgggctgt
     3061 tcacggggca gggcgctggt atgggttgcc agattcacta gggtaatggg cgtcccattg
     3121 taggttggca cgcgtgcgcc tggcggagca tatttactta gcggatcgtt taacttcacg
     3181 gtcccctggt cgagcaattt caccagcatt tcactggtca ttagcttggt gagggaagca
     3241 atacgcacga ccgaatccag ctgcgggcga acgttattac caggtcgcgt ttcgccataa
     3301 ctgcgaaaga cgcgctggtt accgtcgata acaaccagcg ccatccccgt ggcaccgctg
     3361 ccgtaaaaaa tatgatcggc ataacgatcg acaatatcag aggcaaactc cggttcagtg
     3421 atcggctgcg ccgcatggac ggaggtcaat gacgccgcac acagcacggc agaaaaaagc
     3481 agactacgtt tcaacggtgg tgtccataga ttgaatgaag gtaactgagc gtatttatac
     3541 tactcattga tggattgcaa agggcgaatt agtgcaataa tagtgttaaa aacgtaacgg
     3601 cgcgtaaaca cgatcttttt cctgctcacc aatgcctgca tttgtgatcc tgcgcgtgtt
     3661 aatccgctta tgtaaacaat ctttggtttg tgaaatccgt cgaaacaatt cttatggtca
     3721 ggctggcgaa ctaagcgcct tgctatgggt cacaatgggc ggtttcattt ggctgacgct
     3781 ttgtagtggt catgcggtta atacacagca gttgttaaaa cgataagaag ttagcaggag
     3841 tgcatatgtt taagtctttt ttcccaaagc cgggagcgtt ttttctctcg gcctttgttt
     3901 gggcattgat tgccgttatc ttctggcaag ccggtggggg agactgggtg gcgcgtatca
     3961 ccggcgcttc cgggcagatc ccgattagcg ccgcgcgttt ctggtcgttg gatttcctga
     4021 ttttttacgc ttactacatt gtttgcgtag gactttttgc atttttctgg tttatctaca
     4081 gcccgcaccg ttggcaatac tggtcaatac tcggtactgc actgatcatc ttcgtcacct
     4141 ggtttttggt ggaagtcgga gtcgccgtca acgcctggta tgcaccgttc tatgatctga
     4201 ttcaaaccgc gctaagttcg ccgcataaag tcactatcga acaattttac cgcgaagtgg
     4261 gcgtctttct ggggattgcg ctgatcgcgg tggtgatcag tgtactgaac aacttctttg
     4321 tcagtcacta tgtgttccgc tggcgtacgg cgatgaacga atattacatg gcgaactggc
     4381 aacaactgcg tcatatcgaa ggtgccgcac agcgtgtgca ggaagacacc atgcgttttg
     4441 cttcaacgct ggagaatatg ggcgtcagtt ttatcaacgc catcatgacg ttggtcgcct
     4501 tcctgccggt gctggtaacg ctctccgcgc atgtgccgga gctgccgatt atcgggcaca
     4561 ttccgtatgg tctggtgatt gccgctatcg tctggtcgct gatggggacc ggattgctgg
     4621 cagtggtagg gatcaaactg ccggggctgg agtttaaaaa ccagcgagta gaggccgcct
     4681 accgtaaaga gctggtttat ggtgaagacg atgccacgcg cgcgacgccg cctacggtac
     4741 gcgagctgtt tagcgccgta cggaaaaact attttcgcct ctattttcac tatatgtatt
     4801 tcaacatcgc ccgcattctc tatttgcagg tcgataacgt tttcggtttg ttcttgctgt
     4861 ttccgtcaat tgttgccggt acgattacgc tcggcctgat gacgcagatt accaacgttt
     4921 ttggtcaggt tcgcggtgct ttccagtacc tgattaactc atggaccaca ctggttgagt
     4981 tgatgtctat ctacaaacgt ctgcgcagct ttgaacatga gctggatggt gacaaaattc
     5041 aggaagtaac ccataccttg agctaaaaag gagaagtaat gtcgcgcgtc aatcatctat
     5101 cttcgctgtc attgttggcg gttctggttt tagcggggtg tagtagtcag gctccgcaac
     5161 cgttgaaaaa gggcgaaaaa gcgatagatg tagcgagcgt cgtgcggcag aagatgcctg
     5221 cgagcgtgaa agaccgcgat gcctgggcga aagatctcgc caccaccttt gaaagtcagg
     5281 ggctggcacc gacgctggaa aacgtctgct cggtgctggc ggtggcgcag caggagtcaa
     5341 attatcaggc agatccggcc gttccgggct taagcaagat cgcctggcaa gagattgacc
     5401 gtcgtgctga acggatgcac attcctgctt ttctggttca taccgcgcta aaaatcaaat
     5461 cgccaaacgg caaaagttat agcgaacggt tagattcggt gcgtacagaa aagcaattga
     5521 gcgcgatttt tgacgatctg atcagcatgg taccaatggg gcagacgctg tttggttcgc
     5581 ttaatccggt gcgcaccggt gggccgatgc aggtcagcat tgcttttgcc gaacagcata
     5641 ccaaagggta tccgtggaaa atggacggta cagttcgtca ggaagtcttc agtcgccgcg
     5701 gcgggttgtg gtttggtact taccatttac tgaattatcc cgccagctat agcgcaccga
     5761 tataccgctt tgctgatttt aacgctggct ggtacgccag ccgtaatgcc gcgtttcaga
     5821 acgcggtcag taaggccagc ggcgtgaagc tggcactgga cggtgattta attcgttacg
     5881 acagtaaaga acccgggaaa accgaactgg caacgcgcaa actggcggga aaactgggga
     5941 tgagcgacag cgaaattcgc cgtcagttag agaaaggtga cagcttctct tttgaggaga
     6001 cggcgctgta caagaaagtt tatcaacttg ccgaagcgaa aacgggtaaa tcactacccc
     6061 gcgaaatgtt gcctggcatt caactggaaa gcccgaaaat cacccgcaac ctgactacgg
     6121 cctggtttgc gaagcgcgta gacgaacggc gggcgcgttg tatgaaacag tgatcaaaca
     6181 ggaatgtcat gccagataag gcgttttagg ccgtatctgg caacgtaaat cttactggcg
     6241 gcgatgtcgc cagtgcagcc atagcgccac cactgcaaaa atgaggcagc ctactaaaaa
     6301 cgggatcagc ccgaaaatgg tgccgacacc taaaccaatt tccacccgtg ggcgacctgt
     6361 ttcctggacc tgcattaaac gctcatagac gccgggcgca tgcactaaca ggttcagcaa
     6421 ttgcgcccca gcccaaaagc aaaacagcac aaacaacgca taggcaatgt tgccaggcgt
     6481 tgaagaggca ttgcgatatt ttccgctaaa cagcgatttt gacagggtga aatcagccat
     6541 aaaaacctcc ggaagtcatc tgcttctctt ctggtgtgat accagcggct tatggcaagt
     6601 ctgacaggtc atttagattg tcaatatcag aatcatggta aattgatgtt gggaatattc
     6661 ccgaagcgtg aatcttcgtt gtgagtcaca aaatggcaac cttaagttaa atttattaac
     6721 aattacgaaa atgttgtcta caccacagac ggttgttaca gaatatgcaa ggatgttgtt
     6781 tttcgttaac ggagctgcca tgaatctgcc tgtaaaaatc cgccgtgact ggcactacta
     6841 tgcgttcgcc attggcctta tattcattct taatggcgcg gtggggttac tgggatttga
     6901 agcaaaaggt tggcagacct atgccgtcgg tctggtgacg tgggtgatta gtttctggct
     6961 ggcggggttg attattcgtc gtcgcgatga agaaactgaa aacgcccaat aagaatatta
     7021 tcgggcgtta aaatattaca ttgtggtttt caatgcgtta tccgcagcgt gacgctccag
     7081 cgccagctca atcaaacgtg tgatcagatc ggtgtaaccc agaccgctgg cttgccacag
     7141 cttcggatac atactgatgt tggtgaagcc aggcagtgtg ttgatctcgt tgatcaccac
     7201 ttcgttctct ggggttaaaa acacgtctac acgcgccatg cctgcgcatc ccaacgtttg
     7261 ataagcctga acggcaatcg cccggatctt atcgttgatt tctggcgcaa tggctgccgg
     7321 aactaccact ttcgcgccat cttcgtcaat gtacttggtg tcgtaggcat agaagtcgct
     7381 ggtgagtacg atctcgccac aggtgctggc ttgcgggttg tcgttgccca gaactgcgca
     7441 ttcgatctca cgacctttga tcccttgctc aacgatcact ttatgatcga attcgaacgc
     7501 cagatcgacg gcaattgcgt actgttcttc actggttact ttgctgacac caacagaaga
     7561 gccctgatta gccggtttta caaacagtgg taacctcagt ttagactcca cttcggcaaa
     7621 actaatgttg tgacgattgg cgcgcgtcag ggtaataaat ggcgcaatgt tcagcccggc
     7681 atcgcgcagc agacgtttgg taacatcttt atccatacag gctgctgaag ccagaacatc
     7741 agaacctaca aacggtaaat tggcgacccg cagcattccc tgcaaggaac catcttcgcc
     7801 cagcgtaccg tggacaatcg ggaaaatgac atccaccgtc ggtaacggct gaccgttttg
     7861 cgcgtcgata agctgatgct catgtttact tggcacctgc gcaaggctag tcgccgaagg
     7921 gcgcaacgca atatgggcag gatcgtctgc atttagcaga taattgctgg catcgctgac
     7981 gtgccattgc ccttgtttat caatgcccag cagcacaacg tcgaagcgac ttttatcaat
     8041 ggcatcgaca atgttttttg ccgattgcag agacacttca tgttccgctg atttaccacc
     8101 aaaaacgatt cctacccgca gtttttccat cttaaaaacc tatcccgtct aacacaaagt
     8161 gcatacatta ccacgacaaa acgggggatt cgcggccttc tgacagaatg ttgcaatctt
     8221 ctgctgacaa agcgtgcaac gtaatggtga agaaagtgcg ttattacaaa gatatgcgcg
     8281 agatcacaaa aatgatgaac gggaagctaa tttattcctg gcttaaatgg ccatgcggtg
     8341 agttttttct cttagttgta agtaaacgca gagaatatat ttcataactt ttgtttataa
     8401 taaaggttga taattaaagg cctgttcttt gtgtggttaa ttatttaaat atgagaaacg
     8461 tttcgctggt aatcaaacaa agaacatttg cgcaaagtat ttcctttgtc ataaaaataa
     8521 tacttccaga cactatgaag ttgtgaaaca taatgttaac ttctccatac gttggataag
     8581 gaaatacaga catgaaaaat ctcattgctg agttgttatt aaagcttgcc caaaaagaag
     8641 aagagtcgaa agaactgtgc gcgcaggtag aagctttgga gattatcgtc actgcaatgc
     8701 ttcgcaatat ggcacaaaat gaccaacagc gcttgattga acaggtggag ggggctcttt
     8761 acgaggtaaa gcctgatgcc agcattcctg acgacgatac ggagctgctg cgcaattatg
     8821 taaagaagtt attgaagcat cctcgtcagt aaaaagttaa tcttttcaac agctgtcata
     8881 aagttgtcac ggccgagact tatagtcgct ttgtttttat tttttaatgt atttgtacat
     8941 ggagaaaata aagtgaaaca aagcactatt gcactggcac tcttaccgtt actgtttacc
     9001 cctgtgacaa aagcccggac accagaaatg cctgttctgg aaaaccgggc tgctcagggc
     9061 gatattactg cacccggcgg tgctcgccgt ttaacgggtg atcagactgc cgctctgcgt
     9121 gattctctta gcgataaacc tgcaaaaaat attattttgc tgattggcga tgggatgggg
     9181 gattcggaaa ttacagccgc acgtaattat gccgaaggtg cgggcggctt ttttaaaggt
     9241 atcgatgcct taccgcttac cgggcaatac actcactatg cgctgaataa aaaaaccggc
     9301 aaaccggact acgtcaccga ttcggctgca tcagcaaccg cctggtcaac cggtgtcaaa
     9361 acctataacg gcgcgctggg cgtcgatatt cacgaaaaag atcacccaac gattctggaa
     9421 atggcaaaag ccgcaggtct ggcgaccggt aacgtttcta ccgcagagtt gcaggatgcc
     9481 acgcccgctg cgctggtggc acatgtgact tcgcgcaaat gctacggtcc gagcgcgacc
     9541 agtgaaaaat gtccgggtaa cgctctggaa aaaggcggaa aaggatcgat taccgaacag
     9601 ctgcttaatg ctcgtgccga cgttacgctt ggcggtggcg caaaaacctt tgctgaaacg
     9661 gcaaccgccg gtgaatggca gggaaaaacg ctgcgtgaac aggcacaggc gcgtggttat
     9721 cagttggtca gcgatgccgc ctcgctaaat gcggtgacgg aagcgaatca gcaaaaacct
     9781 ctgcttggac tgtttgctga cggcaatatg ccagtgcgct ggctaggacc gaaagcaacg
     9841 taccacggca atatcgataa gcccgcagtc acctgtacgc ctaatccgca acgtaatgac
     9901 agtgtaccaa ccctggcgca gatgaccgac aaagccattg aattgttgag taaaaatgag
     9961 aaaggatttt tcctgcaagt tgaaggtgcg tcaatcgata aacaggatca cgctgcgaat
    10021 ccttgtgggc aaattggcga gacggtcgat ctcgatgaag ccgtacaacg ggcgctggaa
    10081 ttcgctaaaa aggatggcaa cacgctggtc atagtcaccg ctgatcacgc ccacgccagc
    10141 cagattgtcg cgccggatac caaagctccg ggcctcaccc aggcgctaaa taccaaagat
    10201 ggcgcagtga tggtgatgag ctacgggaac tccgaagagg attcacaaga acataccggc
    10261 agtcagttgc gtattgcggc gtatggcccg catgccgcca atgtcgttgg actgaccgac
    10321 cagaccgatc tcttctacac catgaaagcc gccctggggc tgaaataaaa ccgcgcccgg
    10381 cagtgaattt tcgctgccgg gtggtttttt tgctgttagc aaccagactt aatggcaaat
    10441 ctcgggcgca tacgctcatg gttaaaacat gaagagggat ggtgctatga aaattacatt
    10501 actggttacc ttgcttttcg gtctggtttt tttaaccaca gtcggcgctg ccgagagaac
    10561 gttaacccca caacaacagc gtatgacctc ctgtaatcag caggcgacgg cgcaggcgtt
    10621 gaaaggggat gctcgtaaga cctacatgag tgattgcctg aagaacagca agtctgcgcc
    10681 tggtgaaaaa agtttgacgc cacagcagca aaagatgcgc gaatgtaata atcaagcaac
    10741 gcaacaatct ctgaaaggtg atgatcgtaa taagtttatg agtgcctgcc tcaagaaagc
    10801 cgcctgatac ctgatagtgc taacgggtga gctacgaaag tggctcaccc gaaatttcat
    10861 acttctgcct ttagccccgt ctctataatt tgggaaaatt gtttctgaat gttcccaaaa
    10921 ataatgaatg atgaaaactt tttcaaaaaa gcggcggcgc atggggagga acctccttta
    10981 actcctcaaa acgaacatca gcggtccggg ctgcgcttcg cccgtcgcgt cagactaccc
    11041 cgtgcggttg gcctggctgg catgttctta ccgattgctt caacgctggt ttcgcacccg
    11101 ccgccgggct ggtggtggct agtgttggtc ggctgggcgt tcgtctggcc gcatttagcc
    11161 tggcagatag cgagcagggc cgtcgatccg cttagccggg aaatttacaa cttaaaaacc
    11221 gatgcagtat tagcgggaat gtgggtaggc gtaatgggcg taaacgtgct gccttccacc
    11281 gctatgttga tgattatgtg tctgaatttg atgggggcag gcggcccccg tctgtttgtc
    11341 gcgggtctgg tgttgatggt ggtttcctgc cttgtcaccc tcgagcttac gggcattacc
    11401 gtgtcgttca atagtgcgcc gctggaatgg tggctctccc ttcccattat tgtcgtttat
    11461 cctctgctgt ttggctgggt cagctaccag acggcaacca aactggcgga acataaacgc
    11521 aggttgcagg tcatgagtac ccgcgacggc atgacgggcg tgtataaccg acgtcattgg
    11581 gaaactatgt tacgcaatga atttgataac tgtcggcggc ataatcgcga tgcaacgtta
    11641 ctgattatcg atatcgacca tttcaagagc atcaacgata cctggggtca tgatgtgggc
    11701 gatgaagcga ttgtggcgct tacccgacag ttacaaatta ccctgcgcgg tagcgatgtg
    11761 attggtcggt ttggcggcga tgagtttgca gtaatcatgt ccggtacgcc agctgagagc
    11821 gccattaccg ccatgttacg ggtgcgtgaa gggctaaaca cgttacgctt gccgaatacg
    11881 ccacaggtaa ctttacggat tagtgtgggg gttgcgccgc tgaacccaca aatgagtcac
    11941 tatcgtgagt ggttgaaatc ggcagatttg gcgctttaca aagcaaagaa agccggacgt
    12001 aaccgcaccg aagtggcggc ctgacgtcag gcgaaagtca tcaggatttg ctgagttttt
    12061 ctgatttttc catacacttc gtcatcgctt cgatcactgc ggcacggaag cctttctctt
    12121 ccagtacgcg taccgcttca atggtggtgc ctcccggtga gcagaccata tctttcagtg
    12181 cccccggatg ttctcccgtt tccagcacca tttttgcgga acccattacc gcctgagcgg
    12241 caaatttata cgcctgggcg cgtggcatcc cgcccagcac ggcggcgtcg gccatcgctt
    12301 cgataaacat aaatacgtag gctggcgaag aaccgctcac accgactacc gggtggatca
    12361 tcggctcagc aattacttcc gcttcgccaa agcagcggaa aatattcagc acatcagcgg
    12421 tatcttctgg ggttaccagc gcgtttggcg ttacggaggt catcccggca ttaaccagcg
    12481 cgggagtgtt cggcatggcg cggataattt tccggtcatg gcccagcgcg cgggcaagct
    12541 ggtcgagcgt gacacctgca gcaatagaaa cgaccagaga gtctttattc aggctggagg
    12601 tgatttcgct aagcacttta atcatgatgc caggtttaac ggcagcaaaa atgatgtcgg
    12661 cgatttgcgc cacttcttgc gccgattctg cggcgttgat gccgaactgg tcatgcaggg
    12721 cggcgacttt attcggggag ggggtgtata cccagatttg ccctggaagc acctgaccgc
    12781 tggcaatcag accgccgaga atggcttttc ccatattgcc gcagccaata aaaccgattt
    12841 tcttttccat tgcctcactc ctgccgtgaa attcattgtt ttgataatcg ctggcagaag
    12901 cataaacaga actatgccgg aaggcaaaag cgcgacacaa tagaggatta cccaacaaag
    12961 gatgacttta tgacaatttg ggtggatgct gacgcgtgtc ccaatgtaat taaagagatt
    13021 ttgtatcgcg cggcggaacg tatgcagatg ccgctggtac tggtagcaaa ccagagttta
    13081 cgcgtgccgc catcgcgatt tattcgtacg ctgcgcgtcg cggcaggttt cgacgttgcc
    13141 gataacgaaa ttgtccggca gtgtgaagcg ggcgatttgg tgatcaccgc agatatacct
    13201 ttggctgctg aagccatcga gaaaggcgca gcggcgctta atccgcgcgg cgaacgttac
    13261 acgccagcga ccattcgtga gcgcctgacg atgcgcgatt ttatggatac cttacgtgcc
    13321 agtgggatcc agaccggcgg accagatagc ctttcacaac gtgaccgcca ggcctttgcc
    13381 gcggagctgg agaagtggtg gctggaagtg caacgtagtc gtggctaaat gtaatttatt
    13441 atttacactt cattcttgaa tatttattgg tatagtaagg gatgtattga gattttcact
    13501 ttaagtggaa ttttttcttt acaatcgaaa ttgtactagt ttgatggaat gatcgctatt
    13561 ctcatgacac cggctttcgc cgcattgcga cctattgggg aaaacccacg atgacacaac
    13621 ctctttttct gatcgggcct cggggctgtg gtaaaacaac ggtcggaatg gcccttgccg
    13681 attcgcttaa ccgtcggttt gtcgataccg atcagtggtt gcaatcacag ctcaatatga
    13741 cggtcgcgga gatcgtcgaa agggaagagt gggcgggatt tcgcgccaga gaaacggcgg
    13801 cgctggaagc ggtaactgcg ccatccaccg ttatcgctac aggcggcggc attattctga
    13861 cggaatttaa tcgtcacttc atgcaaaata acgggatcgt ggtttatttg tgtgcgccag
    13921 tatcagtcct ggttaaccga ctgcaagctg caccggaaga agatttacgg ccaaccttaa
    13981 cgggaaaacc gctgagcgaa gaagttcagg aagtgctgga agaacgcgat gcgctatatc
    14041 gcgaagttgc gcatattatc atcgacgcaa caaacgaacc cagccaggtg atttctgaaa
    14101 ttcgtagcgc cctggcacag acgatcaatt gttgatttta gagcgcctat acttaacgtt
    14161 cattccgtga aataaggaag aacgatgcca acgaaaccgc cttatcctcg tgaagcatat
    14221 atagtgacga ttgaaaaagg aaagccagga cagacggtaa cctggtacca actcagagcc
    14281 gatcatccta aaccagactc gttgatcagt gaacatccga ccgctcagga agcgatggat
    14341 gcgaaaaaac gctatgagga ccctgacaaa gagtgaccgc atcagactgc tcggaaggga
    14401 ttctgagtgc cactacaagg gatctgcgtc acatttttca taattcatgt ttttctaata
    14461 attagaatat taaacaataa caatccatta ctggaatcat ttggaatctt tacattatgc
    14521 cgtgcacgtc tgctgctacg ctttttgtca tttgtagcac aagtaagtgt cagcagtggt
    14581 gcttcacact tgcccggtaa ttaacgacga aagaaaagta aggtggatga acaatgagtg
    14641 cgtcgttggc gatcctgacc atcggcattg tacctatgca ggaggttttg ccgctcctga
    14701 cggaatacat tgacgaagat aatatttccc atcatagcct gctggggaag ttaagtcgtg
    14761 aagaagtgat ggcggagtac gcgccagaag caggcgaaga caccattctc acattattaa
    14821 atgacaacca gctggcccat gtttcgcgtc gtaaagtgga gcgagacctg caaggtgtgg
    14881 ttgaagtgct cgataatcag ggttatgacg tcattttatt aatgagtaca gcaaacatta
    14941 gtagtatgac tgcgcgtaat acgatctttc ttgagccgtc gcgaatattg cctccactgg
    15001 tttcctctat tgttgaagat catcaggtgg gggttatcgt tccggttgag gagatgctgc
    15061 ccgttcaggc gcaaaaatgg caaattttgc agaaatcgcc ggtattttca ttgggtaacc
    15121 ccattcatga ttcagaacaa aaaatcattg atgcagggaa agaattactg gcaaaagggg
    15181 ctgatgtcat catgctggat tgtttaggat ttcaccaacg tcatcgcgat ttactgcaaa
    15241 aacagctcga tgttcctgtc ttgctgtcta acgtattgat tgcacggctg gctgcggaat
    15301 tactggtgta attttgcgtg acagccagcg cctctggccc ctatagtgaa gtagatgttc
    15361 aactaccaga cagggccagt ttatgcttca aagtaatgag tacttttccg gcaaagtgaa
    15421 atcaatcggc ttttccagca gcagcactgg tcgcgccagc gtgggtgtta tggttgaagg
    15481 cgaatacacc ttcagcaccg ctgagccgga agagatgacg gtaatcagtg gcgcgctgaa
    15541 tgtgttactg cctgatgcga ccgactggca ggtgtatgaa gccggttcgg tgtttaatgt
    15601 tcccggtcac agtgagtttc atctgcaagt tgccgaaccc acctcttatc tgtgccgcta
    15661 tctgtaattc ctcgccttcc ccttgaacgg gagggcattt ttctgaaata tcctctcttt
    15721 aacccataat aatatttcct ttgctgcgat tttttcaatt tccgatatat tcataattca
    15781 tcaaggttga tataaatatc agtgaagatc tccagatatt gttgcggaac tggctacgat
    15841 aaaagataaa tcagatgatg aatggtggcg tgcattgctg caaagtcgca atgatcattt
    15901 gcgccaaacg gcattacgca acgcacatac cccggcgtcg ttgttaacga cattgaccga
    15961 gtctcggcat cggtcgctag ctatgaataa tccacagctc gctgccgatg tgaaaacgac
    16021 gtggttaaaa gaggatccat cattactctt atttgtcgaa caacccgatc tttcgctgtt
    16081 acgggattta gtgaaaaccg gggcaatgcg gaaaattcgc agtgaagcgc gtcactggct
    16141 tgaggaaaaa caatgacaca acgtccatgg agcaagttac agcataaaac gcataatatt
    16201 gctgcgctaa aaattattgt ccgccgtagc gaataattat atccctggtg tggcttcgta
    16261 cgccggataa gacgcggcag gcgtcgcatc cggcattaaa ggaaaatcag caattaacgt
    16321 tgtgcttcgc cacctaatcc ttcaatcagg ttttgaatta acgctgccag ttcaccagtc
    16381 atcaggatga aatcggcatc aaaacgctgg gcgaaatctt cacggtcgat atcttcgttt
    16441 tgatcgcgca gctcgtcgca aaacttcaga cgcttgagcg aaccatcgtc gcacatcaca
    16501 aactgaatgc gctgctgcca gtcgagcgcc agtttagtca ccacttttcc ggcttcgatg
    16561 tgattggtga tctcttcgct ggtcagatct tgtttcttcg cgcggatcac gccgccatct
    16621 tccagcaacg atttcagctc ggcttcatca agcagctgga agccctgtgc cgcgctaccg
    16681 gagcgaaccc attcggtcag cgtcagttca atcgggtttt ccatgctcaa tggtaccaca
    16741 ggtaacgacc ccaggctttt acgcagcagt gccagcgtat cttccgcttt tttggcactg
    16801 gcgcagtcca ccataatcaa accgttaacc gtgtcgatcc acatcattgt ctggctaaaa
    16861 cggctgaaag cacgcggcaa cagagagtgc agcacttcgt ctttcagcga atctttttcg
    16921 gttttcttca gcttacgcgc ctgttccgct tccagtttgg cgattttcgc ttccagcgcc
    16981 tgcttaatca ccggagacgg gaggattttt tcttctttgc gcgcgcagat aacaatttga
    17041 ccattggcaa cgtgcgttaa cgcatcgctg tgcgatccca tcggaggaac ccagcccatc
    17101 ttcgccatgt cctggctgcc gcatggggta aatgccatcg aggctagctg tttttccatc
    17161 tcttctgcac gcagcgaaat ctcgcggcta agacggtaaa ccattaaatt tttgaaccac
    17221 agcatgataa tttccacggc cttgttgtta aatttagcgg gcatgataac gaattgtcgg
    17281 cggccttgca ttgccaatcc ggttgtccgt ctctacgcta ttgatattga aaaaaataag
    17341 gagagtaccg tgcgtatagg tatcgattta ggcggcacca aaactgaagt gattgcactg
    17401 ggcgatgcag gggagcagtt gtaccgccat cgtctgccca cgccgcgtga tgattaccgg
    17461 cagactattg aaacgatcgc cacgttggtt gatatggcgg agcaggcgac ggggcagcgc
    17521 ggaacggtag gtatgggcat tcctggctca atttcgcctt acaccggtgt ggtgaagaat
    17581 gccaattcaa cctggctcaa cggtcagcca ttcgataaag acttaagcgc gaggttgcag
    17641 cgggaagtgc ggctggcaaa tgacgctaac tgtctggcgg tttcagaagc agtagatggc
    17701 gcggcagcgg gagcgcagac ggtatttgcc gtgattatcg gcacgggatg cggcgcgggc
    17761 gtggcattca atgggcgggc gcatatcagc ggcaatggca cggcaggtga gtggggacac
    17821 aatccgctac cgtggatgga cgaagacgaa ctgcgttatc gcgaggaagt cccttgttat
    17881 tgcggtaaac aaggttgtat tgaaaccttt atttcgggca cgggattcgc gatggattat
    17941 cgtcgtttga gcggacatgc gctgaaaggc agtgaaatta tccgcctggt tgaagaaagc
    18001 gatccggtag cggaactggc attgcgtcgc tacgagctgc ggctggcaaa atcgctggca
    18061 catgtcgtga atattctcga tccggatgtg attgtcctgg ggggggggga tgagcaatgt
    18121 agaccgttta tatcaaacgg ttccgcagtt gattaaacaa tttgtcttcg gcggcgaatg
    18181 tgaaacgccg gtgcgtaagg cgaagcacgg tgattccagc ggcgtacgcg gcgctgcgtg
    18241 gttatggcca caagagtaaa aaacgtaggc aattggcgca tcatgcctga tgcgacgctt
    18301 gccgcgtctt atcaggcctg caaaatgtgc cagaaccgcg tagggcggat aaggcgttca
    18361 cgccgcatcc ggcaataagt aatgaacacc gagactataa cctaccccag tggtttcgcc
    18421 agcaagcacc ggagtatccg ccgcttgctg gcgcttatag cgaccataca gcagcaacga
    18481 cgacatcgca gcaaacgaaa gcagggcggc aggcagcgcc acgtaattat atgccagccc
    18541 cagcgtcagc atcataccac cgcaatatgc gccgacggcg ctaccgaggt taaacgctat
    18601 ttgcccacct gcggcaccta ataactctcc gcctttggcg ttttgtagta acaatatttg
    18661 tagcggtgct gaaagggcaa ataatcccgc gcaacaaata aaagcaaaaa taagcgacgt
    18721 tgttttcatg ccgccgcaga aaaagaacat cagcagtgcc agtacaatta taaagtcagt
    18781 cactgctgca atgcgcagtg gtgaataacg tcctgaaatc ctgccactta gcatatttcc
    18841 cagcaccatc cctagcccaa ctaacatcat aataaaggtc atcgccgttt ccgaaaaacc
    18901 ggaaataaac atcatgtatg gctttacgta gctgaaccag gcaaacacac ctgcgttgcc
    18961 aaacatggtg gcggcgaaaa ttaaccacgg ggccgggctg cgcaaaaagt gaaattgttc
    19021 gcgcagcttt cctttcgcct cgtcgcgaat atccggcacc caaaaataga ccgatgccat
    19081 caccgcaata ttaaaaacag cgatcaataa aaaggtgtaa cgccagctaa attcctgact
    19141 taaatacgtt cccagcggaa tgcccagcaa attggcgact gtcatcccgg aaaccatccc
    19201 cgccacggcg gcggtgactt ttccgggttt gataattttt gataacacga tcgcgccgac
    19261 gccaaaaaat gcgccatgcg gaaagccgga taccagccga ccaatggcga gcatcaggta
    19321 agacgaagag agcgtgaaca tggcgttgcc aatgacgcac aacgccacca gaaacaacaa
    19381 gatatgtttg agtgagtagc ggctggaaaa gagtgcgatg attggcgcac cgaccaccac
    19441 tcccagtgca taatacgaga tcatatgccc ggcagcagga atcgaaattc ctacgttatg
    19501 cgccagctcc gtgagcacgc ccataatgcc aaattcggcc atccccaaac caaacgtgcc
    19561 cagagccaaa gataaaatga cttttttcat accaccatca caaccaccag aacggctacc
    19621 aatcaccgta gccaataaag tgatagcttg caggataacg accagcaagg ccaagagata
    19681 attcgcccct ctgtattcat tatcctgctg aatagttatt tcactgcaaa cgtactttcc
    19741 agtttgctgt agcccaggcc gttgatcttt ttcactttga tctgcaccgg aatacgctct
    19801 ttcatcgctt ctacgtggct aatcacaccg atggttttgc cactggcgtt cagggcatcc
    19861 agcgcatcaa gggcggtatc cagcgtttcg ctatccagcg tgccaaaacc ttcatcaagg
    19921 aacagcgagt caatacgtgt tttatggctg accagatccg aaagcgccag cgccagcgcc
    19981 agactaacga ggaaactttc gccgccggaa agggtacggg tatcgcgtac cgcatctgcc
    20041 tgccaggtat caacaacctc gacttccagc gcctcgctgg ctttgcgctg taacagatag
    20101 cgcccgtgca gccgggtaag ttgctgatta gcgagatgga ctaaattatc cagcgtcagc
    20161 ccctgggcaa acttgcggaa tttatcgccc tctttggaac ctattagcga attcagatat
    20221 ccccagtcct caacctgctg cgtcatttga gcaatttgct gcattaaggt ttgttgttgc
    20281 tgacggttat ctgcatcctg cttcagctgc tggcgaatct cgccttgact cgtggtgttt
    20341 tcacgcaact tttggtgagt ttgcgctaac tcttgctgaa tctgctccac cgtcacagtg
    20401 agagccaacc cgtcaggtcg gtgttgttga tgctgtgcca gcgtttctgc tgtctgagtg
    20461 accagcgttt gcgcctgacg gcgctggttt tccagattct gcttgagctg ttccagctgc
    20521 gttagtgttt gttcatccat tagcgccgca aggaacgcct gctgatcgtc aaagacgctg
    20581 gcctgtagcg cggtgtcaaa ctgcgcctgg gctttttgca gactttgcgc cgccagaaca
    20641 tcctgttgct gtaacgtctg ctgctggctg tgtaatgcga gacattgttc atgaacctgc
    20701 cgccagttat ccagcgccac agtttcttcg ctgtgcggga gatcatcact ttgcggcaac
    20761 gtttccagaa tcggcgtcag ctgctgaata cggttttgca gcgtggttaa ttcgttctgg
    20821 cgttgctgcc agctctgcgc ttcttgctga cgtgtcgcca accagctctc ttcttcatct
    20881 tcctgtggca atgtcagtgc ataacccgcc aatgccgtta agagctgctg ctggcgttgt
    20941 tcaatttgct gttgatactg gataatttgc tgattatgcg cggcaatctg cccttgtaat
    21001 tcatgtcgtt ggctgagtaa ccgcagctgg cgtttgtgct catcttgtgc atccagccac
    21061 ggttgaatat cgtcctgtgg ctgcaaggtg atattgaggc tggccgtgac ggcttgccat
    21121 tgttgagtaa gtgcttgctc atcttgtcgg aggctttgcg cttcgttttc atcgcgctga
    21181 agctgcttcg ttaatgcatc cagttgcccg cgcagcgccg caccttcttc gccgagcttt
    21241 ttaacttcgt tttccagcgc cagtaatcga gactgattaa caccaggctc cagcgcctga
    21301 tacgccttga ccgccgggtg gctggtggaa ccacaaagtg gacaaggctg acccgcctgt
    21361 aactgtgcac gctgggcttc cagcgttttg atgcgcgctt cctgctcgca aatggttttc
    21421 acatcggcaa gttgctgcgt cttttcttta taacgctggc gcatttcgtt aagtgcgaca
    21481 ttacgttgcg tctgttccag agatccattc tggatagtga ccattaactg cgccagacgt
    21541 ttttgttggg gaacaatctg cccatgcagc gcgaccaggc gctgacgcag tgggcgttgc
    21601 tcagcatgtt gcgccagggc ggtagcaact tcatcggcgg ttaacgtcaa cgtgatcgcc
    21661 gcaagcgcat taagtttttg ctcagcatgg gttaactgtt gctgccattg ccgcagatgc
    21721 tcgcgatcgc tggtttgttg ggagaactgc gcacgccaac ccgccagttc gttgttccac
    21781 tgacggaagc ggtcgtgttc ctgtaaccag gtattcaggc tttgttgctg ctgctgtaat
    21841 tctgctgact gcttcgccgc gtggtggcga atgctcgcgc gaagcgccat tgtgctctgt
    21901 aagcgagtat ttacttcttc aatctgctgg cgagtatgcg ccagcgccgc gctgtgttct
    21961 gcgatgcgtt cccagtgcgg acgaagattt cgtgccggtt gtgccagact gagcgccgcc
    22021 agttgaggtt gcgctttttc ttcttcggct aacgcctgtt gcaaggcctg ctgacggcgg
    22081 ctggcttctt gctgcaattc gtccagacgc gttaaccagt ttagtgattg ttgttcttgc
    22141 tgctgcgcgg taagtaactg tttttcttcg tcagtaagta cctgcaaact cgctgtcagc
    22201 gattgcactt gttccggcgt gagcaacgcg acgccgctgg cctgcgcttg cagcttctcc
    22261 agctctgtgc gggccgattt gtgctgctca aaaaccatcg ccgagatttg cccgtagatt
    22321 tcagtgccgg ttaactcctc gagcaattcc gcgcgttctt tgggtttggc attcaggaag
    22381 gcagcaaatt gcccctgcga aagcagcatc gaacgggtga agcgcccgta atccagcccg
    22441 gttaacgtcg ctgtcagttc cagcttatct ttcactttgt cggcgagaat tttgccgtcg
    22501 gcgcagcgcg ccagctctac gcgtggcacc tgcaaattac cgtcgggttg gttacgcgcc
    22561 cgattctggc tccagaatgc acggtacgct tcacctttca cttcaaactc cacctccgcc
    22621 agacattcgg cggtatcgcg ggtcatgaga tcattttgcg attgtgaaac gttagagaga
    22681 cgcggagttt cgtgatacag cgccagacaa atggcgtcca gcagggtggt tttccccgca
    22741 ccggttgggc cggtaatggc aaacagcccg ttgctggcga acggctcgcg ggtgaaatca
    22801 atcttccatt cgccttttaa tgagttcagg tttttcaggc gcaggctgag aattttcatg
    22861 cttcgtgttc tccggcgagg gtatgcaacg tcgtggtgaa aagatgctgc agacgttgct
    22921 gctgcgattc atccagttct tccagtgcca gacggcgatt gaacacctct tcgacgctga
    22981 gttcgctgag ggtttcacgc tgttggctgg ctaacacacg ctcgcgctgt tcacgactcc
    23041 gacgtaccag caatacttcg acaggcaatg attcggctaa tgcctggatt ttgcgctgaa
    23101 tatcatgcag atactcatca gtagtgattt cgatatccag ccagacaggt ggctcctgcg
    23161 atacatcgcg ccactgttcc agctgtgcgg taatcgacgc cagatcgcct ttcagcaccg
    23221 ccatgggttg agttaccggt acgttcaggt tttccacgct ctctaatttg ccgtttgaaa
    23281 atgtcaccag atggacatat ttactcttac cgcattcatc aaaactcagt ggaatggggg
    23341 aaccgcaata gcgaacatgt tccatgccgc caataatctg tgcgcggtga atatgcccga
    23401 gcgcgatgta gtcggctggt ggaaagtttt gtgccggaaa cgcgtccagc gtgccaatat
    23461 aaatgtcacg cacggcgtca cttttactgg cacccacggt cgttaaatgt cccgtggcga
    23521 tgatgggcag aggctgatcg ccgcgcagtt tgcaggcatc ggcatagtgt tgttggtaat
    23581 aatcggtaat cgctgccagt aaatgctgct gtttttcaat accgttaagc cccgcctggc
    23641 tggaaataat gtcacgcggg cgtaaaaacg gaatggggca cagcactgcg cctggcgtcc
    23701 cgtcgcgacg aggcaagatt tgcggcgcat gtccggcgct ggcgaccacg gttgtattga
    23761 ggaacgccat gatatcgcgc gattcattca gcgtggcgac cgagtcatgg tttcctgcca
    23821 gtaccaccag atgacagcca gtttgctgta aattgacaac aaaacggttg tataacgtgc
    23881 gggcgtaact gggcggcgag ccggtatcga aaacatcacc agcaacaata atcgcatcca
    23941 cctgatgggt ttgtgctgtc tccagcagcc agtcaagaaa agcctgatgt tcagcttcgc
    24001 ggcttttact gtagaagttc tggccgagat gccagtctga ggtgtgaagg atgcgcataa
    24061 cggttccctg gcgaaaaagc atggtcgcga ttatacccaa acagatgtgc catttgcttt
    24121 tttctgcgcc acggaaatca ataacctgaa gatatgtgcg acgagctttt cataaatctg
    24181 tcataaatct gacgcataat gacgtcgcat taatgatcgc aacctattta ttacaacagg
    24241 gcaaatcatg gcgagacgta ttctggtcgt agaagatgaa gctccaattc gcgaaatggt
    24301 ctgcttcgtg ctcgaacaaa atggctttca gccggtcgaa gcggaagatt atgacagtgc
    24361 tgtgaatcaa ctgaatgaac cctggccgga tttaattctc cttgactgga tgttacctgg
    24421 cggctccggt atccagttca tcaaacacct caagcgcgag tcgatgaccc gggatattcc
    24481 agtggtgatg ttgaccgcca gaggggaaga agaagatcgc gtgcgcggcc ttgaaaccgg
    24541 cgcggatgac tatatcacca agccgttttc gccgaaggag ctggtggcgc gaatcaaagc
    24601 ggtaatgcgc cgtatttcgc caatggcggt ggaagaggtg attgagatgc agggattaag
    24661 tctcgacccg acatctcacc gagtgatggc gggcgaagag ccgctggaga tggggccgac
    24721 agaatttaaa ctgctgcact tttttatgac gcatcctgag cgcgtgtaca gccgcgagca
    24781 gctgttaaac cacgtctggg gaactaacgt gtatgtggaa gaccgcacgg tcgatgtcca
    24841 cattcgtcgc ctgcgtaaag cactggagcc cggcgggcat gaccgcatgg tgcagaccgt
    24901 gcgcggtaca ggatatcgtt tttcaacccg cttttaacgc cttgctcatc ggacgcagag
    24961 cagggcttat gatttcttaa ctggagtatc ttacgtgctg gaacggctgt cgtggaaaag
    25021 gctggtgctg gagctgctac tttgttgcct cccggctttc atcctgggtg cattttttgg
    25081 ttacctgccc tggtttttgc tggcatcggt aacaggactg cttatctggc atttctggaa
    25141 tttattgcgc ctttcatggt ggttgtgggt ggatcgcagt atgaccccgc caccggggcg
    25201 tggtagctgg gaaccgctac tatacggctt acaccagatg cagctgcgaa ataaaaaacg
    25261 ccgccgtgaa ctgggcaatc tgattaaacg ctttcgtagc ggcgcggagt cgctgcccga
    25321 cgcggtggtg ctgaccacgg aagagggcgg tattttctgg tgtaacggtc tggcgcaaca
    25381 aattcttggt ttgcgctggc cggaagataa cgggcagaac atccttaacc tactgcgtta
    25441 cccggagttt acgcaatatc tgaaaacgcg tgatttttct cgcccgctca atctggtgct
    25501 caacaccggg cggcatctgg aaattcgcgt catgccttat acccacaaac agttgctgat
    25561 ggtggcgcgt gatgtcacgc aaatgcatca actggaaggg gcgcggcgta acttttttgc
    25621 caacgtgagc catgagttac gtacgccatt gaccgtgtta cagggttacc tggagatgat
    25681 ggatgagcag ccgctggaag gcgcggtacg cgaaaaagcg ttgcacacca tgcgcgagca
    25741 gacccagcgg atggaagggc tggtgaagca gttgctaacg ctgtcgaaaa ttgaagccgc
    25801 gccgacgcaa ttgctcaatg aaaaggttga tgtgccgatg atgctgcgcg ttgttgagcg
    25861 cgaggctcag actctgagtc agaaaaaaca gacatttacc tttgagatag ataacggcct
    25921 caaagtgtct ggcaacgaag atcagctacg cagtgcgatt tcgaacctgg tctataacgc
    25981 cgtgaatcat actccagaag gcacgcatat caccgtacgc tggcagcgag tgccgcacgg
    26041 tgccgaattt agcgttgaag ataacggacc gggcattgca ccggagcata ttccgcgcct
    26101 gaccgagcgt ttttatcgcg ttgataaagc gcgttcccgg caaaccggcg gtagcggatt
    26161 agggttagcg atcgtgaaac atgctgtgaa tcatcacgaa agtcgcctga atattgagag
    26221 tacagtagga aaaggaacac gtttcagttt tgttatcccg gaacgtttaa ttgccaaaaa
    26281 cagcgattaa tccgcctttg tcatctttta ttgccataag ccagtcgatg ctggcttatt
    26341 ttctttgcag tcaaaatacg ggcgttagat tttacaacgg ttggtgattt tttgttcgca
    26401 tgattagcca tgtctttttc acggaaatag tgttttatac tggttggtga tttcttatcg
    26461 ctatatacct ctggttttta gatccctcct tgctttaaaa cgttataagc gtttaaattg
    26521 cgcttcaggt gctgtcatac tgactgcatt aacgcggtaa atcgaaaaac tattcttcgc
    26581 cgcgccaggt tgggagtatt tcccgctaaa attgtttaaa tataccgctg tatcatcccc
    26641 agggattggc acaaaaattt aacgttacaa caccacatcc acaggcagta tgatttatga
    26701 cccatcaatt aagatcgcgc gatatcatcg ctctgggctt tatgacattt gcgttgttcg
    26761 tcggcgcagg taacattatt ttccctccaa tggtcggctt gcaggcaggc gaacacgtct
    26821 ggactgcggc attcggcttc ctcattactg ccgttggcct gccggtatta acggtagtgg
    26881 cgctggcaaa agttggcggc ggtgttgaca gcctcagcac gccaatcggt aaagtcgctg
    26941 gcgtgctgct ggcaacggtt tgttacttgg cggtggggcc gcttttcgct acgccgcgta
    27001 cagctaccgt ttcctttgaa gtggggattg cgccgctgac gggtgattcc gcgctgccgc
    27061 tgtttatcta cagcctggtc tatttcgcta tcgttattct ggtttcgctc tatccgggca
    27121 agctgctgga taccgtgggc aacttccttg cgccgctgaa aattatcgcg ctggtcatcc
    27181 tgtctgttgc cgctattgtc tggccggcgg gttctatcag cacggcgact gaggcttatc
    27241 aaaacgctgc gttttctaac ggcttcgtta acggctatct gaccatggat acgctgggcg
    27301 caatggtgtt tggtatcgtt attgttaacg cggcgcgttc tcgtggcgtt accgaagcgc
    27361 gtctgctgac ccgttatacc gtctgggctg gcctgatggc gggtgttggt ctgactctgc
    27421 tgtacctggc gctgttccgt ctgggttcag acagcgcgtc gctggtcgat cagtctgcaa
    27481 acggcgctgc tattctgcat gcttacgttc agcacacatt tggcggcggc ggtagcttcc
    27541 tgctggcggc gttaatcttc atcgcctgcc tggtaacggc agttggcctg acctgtgctt
    27601 gtgcagaatt ctttgcccag tacgtaccgc tctcttatcg tacgctggtg tttatcctcg
    27661 gcggcttctc gatggtggtg tctaacctcg gcttaagcca gctgatccag atctccgtac
    27721 cggtgctgac cgctatttat ccgccgtgta tcgcactggt tgtattaagt tttacacgct
    27781 catggtggca taattcgtcc cgcgtgattg ccccgccgat gtttatcagc ctgctttttg
    27841 gtattctcga cgggatcaaa gcatctgcat tcagcgatat cttaccgtcc tgggcgcagc
    27901 gtttaccgct ggccgaacaa ggcctggcgt ggttaatgcc aacagtggtg atggtggttc
    27961 tggccattat ctgggatcgc gcggtaggtc gtcaggtgac ctccagcgct cactaaatca
    28021 ctgaacattt gttttaacca cggggctgcg atgccccgtg gttttttatt gtgttgatgg
    28081 gttaggaatt gatggaaagt aagaacaagc taaagcgtgg gctaagtacc cgccacatac
    28141 gctttatggc actgggttca gcaattggca ccgggctgtt ttacggttcg gcagacgcca
    28201 tcaaaatggc cggtccgagc gtgttgttgg cctatattat cggtggtatc gcggcgtata
    28261 tcattatgcg tgcgctgggg gaaatgtcgg tacataaccc ggccgccagc tctttctcgc
    28321 gttatgcgca ggaaaacctc ggcccgctgg caggttacat taccggctgg acctactgct
    28381 ttgaaatcct aattgtcgcc atcgccgatg tgaccgcttt tggtatctat atgggtgtct
    28441 ggttcccgac ggtgccgcac tggatttggg tactgagcgt ggtgctgatc atttgcgccg
    28501 taaacctgat gagcgtgaag gtattcggtg agctggaatt ctggttctcg ttctttaaag
    28561 tcgccaccat catcatcatg attgtcgccg gtttcggcat catcatctgg gggattggca
    28621 acggcgggca accgaccggt attcataacc tgtggagcaa cggcggcttc ttcagtaacg
    28681 gctggcttgg catggtaatg tcgttgcaaa tggtgatgtt tgcttacggt gggatcgaaa
    28741 ttatcgggat taccgccggt gaagcgaaag atcctgagaa atcgattccg cgtgcgatta
    28801 actccgtgcc gatgcgtatt ctggtgttct acgtcggtac gctgttcgtc attatgtcta
    28861 tctacccgtg gaatcaggtt ggcactgccg gtagcccgtt cgtgctgacg ttccagcata
    28921 tgggcattac ctttgccgcc agcattctta actttgttgt gctgaccgct tcgctgtcgg
    28981 caattaacag tgacgtattt ggcgtaggcc gtatgctcca cggtatggca gagcagggca
    29041 gcgcaccgaa aattttcagc aaaacgtcgc gtcgcggtat tccgtgggtt acggtgctgg
    29101 tgatgactac cgcgctgctg tttgcggtgt atctgaacta catcatgccg gaaaacgtct
    29161 tcctggtgat cgcttcgctg gcaaccttcg ccacggtatg ggtgtggatt atgatcctgc
    29221 tgtcgcaaat cgccttccgt cgccgtttgc cgccagaaga agttaaggcg ctgaaattta
    29281 aagtgccggg tggggtagca acgaccatcg gcgggctgat tttcctgctc tttattatcg
    29341 ggttgattgg ttatcacccg gatacgcgta tctcgctgta tgtcggtttc gcgtggattg
    29401 ttgtgctgtt gattggctgg atgtttaagc gtcgccacga tcgtcagctg gctgaaaacc
    29461 agtaatcctt gcgttctgta agccggttca ggaggaaatc ctgatccggc tattccgaaa
    29521 gttatccgcc cccgtcctcc tcccccaaat atccttcaga tgatgagtga tcctgcatta
    29581 ggctatggca aggtgatcag attttcatca caggggaatt atgatgttaa atgcatggca
    29641 cctgccggtg cccccatttg ttaaacaaag caaagatcaa ctgctcatta cactgtggct
    29701 gacgggcgaa gacccaccgc agcgcattat gctgcgtaca gaacacgata acgaagaaat
    29761 gtcagtacca atgcataagc agcgcagtca gccgcagcca ggcgtcaccg cagggcttca
    29821 gccgaatgcc gccggcacga ctggagcagt ttgccgtcga tgtaccggat atcggcccac
    29881 aatgggctgc ggatcagatt ttttatcaga tcttccctga tcgttttgcg cgtagtcttc
    29941 ctcgtgaagc tgaacaggat catgtctatt accatcatgc agccggacaa gagatcatct
    30001 tgcgtgactg ggatgaaccg gtcacggcgc aggcgggcgg atcaacgttc tatggcggcg
    30061 atctggacgg gataagcgaa aaactgccgt atctgaaaaa gcttggcgtg acagcgctgt
    30121 atctcaatcc ggtgtttaaa gctcccagcg tacatcaata cgataccgag gattatcgcc
    30181 atgtcgatcc gcagtttggc ggtgatgggg cgttgctgcg tttgcgacac aatacgcagc
    30241 agctgggaat gcggctggtg ctggacggcg tgtttaacca cagtggcgat tcccatgcct
    30301 ggtttgacag gcacaatcgt ggcacggggg gagcttgtta caaccctgaa tcgccctggc
    30361 gcgactggta ctcgtttagt gatgatggca cggcgctcga ctggcttggc tatgccagct
    30421 tgccgaagct ggattatcag tcggaaagtc tggtgaatga aatttatcgc ggggaagaca
    30481 gtattgtccg ccattggctg acagcgccgt ggagtatgga cggctggcgg ctggatgtgg
    30541 tgcatatgct gggggaggcg ggtggggcgc gcaataatat gcagcacgtt gctgggatca
    30601 ccgaagcggc gaaagaaacc cagccggaag cgtatattgt cggcgaacat tttggcgatg
    30661 cacggcaatg gttacaggcc gatgtggaag atgccgccat gaactatcgt ggcttcacat
    30721 tcccgttgtg gggatttctt gccaataccg atatctctta cgatccgcag caaattgatg
    30781 cccaaacctg tatggcctgg atggataatt accgcgcagg gctttctcat caacaacaat
    30841 tacgtatgtt taatcagctc gacagccacg atactgcgcg atttaaaacg ctgctcggtc
    30901 gggatattgc gcgcctgccg ctggcggtgg tctggctgtt cacctggcct ggtgtaccgt
    30961 gcatttatta cggtgatgaa gtgggactgg atggtaaaaa cgatccgttt tgccgtaaac
    31021 cgttcccctg gcaggtggaa aagcaggata cggcgttatt cgcgctgtac cggcgaatga
    31081 ttgtgctgcg taagaaaagt caggcgctgc gtcgtggcgg ctgtcaggtg ctgtatgcgg
    31141 aagataacgt agtggtattt gtccgcgtgc tgaatcagca acgtgtactg gtggcaatca
    31201 accgtggcga ggcctgtgaa gtggtgctac ccgcgtcacc gtttctcaat gccgtgcaat
    31261 ggcaatgcaa agaagggcat gggcaactga ctgacgggat tctggctttg cctgccattt
    31321 cggctacggt atggatgaac taacgtttta taacgccttg tgtgacgcct gcgccatcat
    31381 ccgcggataa aactgccaga agcgggttcc gagggcggta taatgggcgt ttaaatcgta
    31441 ccaggagtca cgcagggcat ccagacgtgg gcgacggctt gccatgccgt ttaacacgtt
    31501 ctggatgaaa tccatatcgc gatagcgcac cagccactgc tctgaccaca agtaattgtt
    31561 tagattgata aaacgtggcg gtgagtccgg caaaatcgtc atcacttgct tgcgggcata
    31621 acagataaat tcctgtagcg gaaagtccgg cgacagctgc gaccagtggc gggaaagaaa
    31681 gtgatcccac atgacatcca gcgtaatagg cgcaacgcgg cgcgtttcac gacgaaacca
    31741 ctcccgtgct tcgcggactt ccggcagatt gtcagtcaat acgtcgatac gtcgatgcat
    31801 atgaatgcca gccacgacgt cgggcggaaa actttcttca ggatttccgc gtacgaaatc
    31861 agccagtaaa ttgccggaaa gcgagctttc cgcgagatgg gctaaatgca ggtgagctaa
    31921 aaaattcatc gattatattc tatccaaagg ggggtaaagg ttgcagggag agcgccccgg
    31981 cactagacta cccgcctctt attttagtct gagtcagtgt catgcgcgtt accgatttct
    32041 tctttgaatt gcccgaatcc ctgattgccc actaccccat gcctgaacgc agtagctgtc
    32101 gtttactgtc gctggacggg cctacgggcg cgctgacgca cggtactttc accgatttac
    32161 tcgataagct caaccccggc gatcttctgg tttttaataa tactagcgtg atcccggcgc
    32221 gcctgtttgg gcgtaaagcc agcggcggca agattgaagt gctggttgag cggatgctcg
    32281 acgacaaacg cattcttgcg catattcgcg cctcgaaagc gccaaaacct ggcgcagaac
    32341 tgctgctggg cgatgacgaa agtattaacg caacaatgac cgcgcgccac ggcgcactgt
    32401 ttgaagtcga attcaatgat gatcgttcgg tactggatat cctcaacagt atcgggcata
    32461 tgccgctgcc gccgtatatc gaccgtccgg acgaagacgc tgaccgcgaa ctttatcaaa
    32521 ccgtttatag cgaaaaaccg ggcgcggttg cagccccgac cgctggtctg cattttgacg
    32581 agcctttgct ggaaaaattg cgcgccaaag gcgtggagat ggcgtttgtg acgttgcacg
    32641 ttggtgcggg caccttccag ccggtgcgcg tcgacaccat tgaagatcac atcatgcact
    32701 cggaatacgc tgaagtaccg caggatgtgg tagacgcggt actggcggcg aaagcgcgcg
    32761 gtaaccgggt gattgcggtt ggcaccactt cagtacgttc gctggaaagc gcggctcagg
    32821 cagcgaaaaa cgatctcatt gaaccgttct tcgacgatac ccaaatcttt atctatccgg
    32881 gcttccagta caaagtggtc gatgcgctgg tgacgaactt ccacttgcca gagtcgacgc
    32941 tgattatgct ggtttcggcc tttgccggtt atcaacacac catgaacgcc tataaagcag
    33001 cggtagaaga gaaatatcgc ttttttagtt acggtgatgc gatgtttatt acgtacaatc
    33061 cgcaggcaat taatgagcgc gtcggggagt aattccgcgg cgctggttta aaacgttgga
    33121 ctgtttttct gacgtagtgg agaaaaaatg aaatttgaac tggacaccac cgacggtcgc
    33181 gcacgccgtg gccgcctggt ctttgatcgt ggcgtagtgg aaacgccttg ttttatgcct
    33241 gttggcacct acggcaccgt aaaagggatg acgccggaag aagttgaagc cactggcgcg
    33301 caaattatcc tcggcaacac cttccacctg tggctgcgcc cgggccagga aatcatgaaa
    33361 ctgcacggcg atctgcacga ttttatgcag tggaaggggc cgatcctcac cgactccggg
    33421 ggcttccagg tcttcagcct tggcgatatt cgtaaaatca ccgaacaggg cgtgcacttc
    33481 cgtaacccga tcaacggcga tccgattttc ctcgatcctg aaaaatcaat ggagattcag
    33541 tacgatcttg gttcggatat cgtcatgatc tttgatgagt gtacgccgta tcctgctgac
    33601 tgggattacg caaaacgctc catggagatg tctctgcgtt gggcgaagcg tagccgtgag
    33661 cgttttgaca gtctcggaaa caaaaatgcg ctgtttggta tcattcaggg cagcgtttac
    33721 gaagatttac gtgatatttc tgttaaaggt ctggtagata tcggttttga tggctacgct
    33781 gtcggcggtc tggctgtggg tgagccgaaa gcagatatgc accgcattct ggagcatgta
    33841 tgcccgcaaa ttccggcaga caaaccgcgt tacctgatgg gcgttggtaa accagaagac
    33901 ctggttgaag gcgtacgtcg tggtatcgat atgtttgact gcgtaatgcc aacccgcaac
    33961 gcccgaaatg gtcatttgtt cgtgaccgat ggcgtggtga aaatccgcaa tgcgaagtat
    34021 aagagcgata ctggcccact cgatcctgag tgtgattgct acacctgtcg caattattca
    34081 cgcgcttact tgcatcatct tgaccgttgc aacgaaatat taggcgcgcg actcaacacc
    34141 attcataacc ttcgttacta ccagcgtttg atggcgggtt tacgcaaggc tattgaagag
    34201 ggtaaattag agagcttcgt aactgatttt taccagcgtc aggggcgaga agtaccacct
    34261 ttgaacgttg attaatatta ataatgaggg aaatttaatg agctttttta tttctgatgc
    34321 ggtagcggca acgggtgcac cggcgcaagg tagcccgatg tctttgattt tgatgctggt
    34381 ggtattcggt ctgattttct atttcatgat cctgcgtcca cagcagaagc gcaccaaaga
    34441 acacaaaaag ctgatggact ccattgccaa aggtgatgaa gttctgacga acggtggcct
    34501 ggttggtcgc gtaaccaaag tagcggaaaa cggctacatt gctatcgcgc tgaatgacac
    34561 cactgaagta gttattaaac gtgacttcgt agctgccgtc ctgccgaaag gcaccatgaa
    34621 ggcgctgtaa ttaaaatttt tccctaaggg aattgccgtg ttaaaccgtt atcctttgtg
    34681 gaagtacgtc atgctgatcg tggtgattgt catcggtctg ctgtatgcgc ttcccaacct
    34741 gtttggtgag gatccggctg ttcagatcac tggtgcgcgc ggagtcgccg ccagtgagca
    34801 aacgctgatc caggtccaga aaacgttaca agaagaaaaa ataactgcta agtctgtggc
    34861 actggaagag ggcgctattc ttgcgcgctt cgactccact gacacccagc tgcgcgctcg
    34921 tgaagcatta atgggcgtta tgggtgacaa atacgtcgtg gcgcttaacc ttgccccggc
    34981 aacgccgcgc tggctggcag ctattcacgc tgagccgatg aagctcggcc ttgacctgcg
    35041 tggcggcgtt cacttcctga tggaagtgga tatggacacc gcgcttggca aactccagga
    35101 acaaaatatc gatagcctgc gcagcgatct gcgtgaaaag ggcatcccgt ataccaccgt
    35161 tcgtaaagaa aacaactacg gcctgagcat tactttccgc gatgctaaag ctcgtgatga
    35221 agccattgcg tatctgagca agcgccatcc ggacctggtg attagtagcc agggcagcaa
    35281 ccagctgcgt gcggtaatga gcgatgctcg tctgagtgaa gcgcgtgaat atgcggtgca
    35341 gcagaacatc aatatcctgc gtaaccgtgt aaaccaactt ggcgtagcgg agccggtggt
    35401 tcagcgtcag ggtgctgacc gtatcgttgt tgaactgcca ggtattcagg acactgcgcg
    35461 tgcgaaagag attctgggtg cgacggcaac gctggaattc cgtctggtaa acaccaacgt
    35521 tgaccaggcc gctgcggcat ccggtcgcgt accgggcgac tctgaagtga aacagacccg
    35581 cgaaggtcag ccagttgtgc tgtacaaacg cgtaattctg accggtgacc atatcaccga
    35641 ctccacttcc agccaggacg aatacaacca accgcaggtt aacatctcgc tcgatagcgc
    35701 tggtggtaac atcatgtcta acttcactaa ggacaacatc ggcaaaccga tggcaaccct
    35761 gtttgtggag tacaaagaca gcggtaagaa agatgcaaat ggtcgtgcgg ttctggtgaa
    35821 acaggaagag gtgattaaca tcgccaacat ccagtctcgt ctgggtaaca gcttccgtat
    35881 caccggcatc aacaacccga acgaagcccg tcagctgtca ctgctgctgc gtgccggtgc
    35941 gttgatcgcg ccgattcaga ttgttgaaga acgtaccatt ggcccaaccc tgggtatgca
    36001 gaacattgaa caggggctgg aggcttgcct tgccggtctg ctggtttcta ttctgttcat
    36061 gatcatcttc tataagaagt ttggtctgat tgcgaccagt gctctgattg ccaacttgat
    36121 cttaatcgtc ggcattatgt cgctgttgcc aggcgcaacg ctgagtatgc caggtatcgc
    36181 gggtatcgtc ttaacccttg cggtggcggt cgatgcgaac gtactgatca acgaacgtat
    36241 taaagaagag ttgagcaacg gacgtactgt tcaacaggca attgatgaag gttatcgtgg
    36301 cgcattcagt tctatcttcg atgcgaacat caccacgctg attaaagtca tcatcctgta
    36361 cgcagtgggt accggggcaa ttaaagggtt cgcgattact accggtatcg gtgtggcgac
    36421 gtcgatgttt accgcgattg tcggtacgcg tgccatcgta aacctgctat atggcggcaa
    36481 gcgcgtcaag aagctgtcaa tctgaggagt gcgatgtggc acaggaatat actgttgaac
    36541 aactaaacca cggccgtaaa gtctatgact ttatgcgctg ggactactgg gctttcggca
    36601 tctctggtct gctgttaatc gccgctatcg ttattatggg cgtgcgcggc tttaactggg
    36661 ggctggattt caccggtggt acggttatcg aaattacgct cgaaaaaccg gctgaaattg
    36721 acgtaatgcg tgatgcattg caaaaagccg gttttgaaga gccaatgctg caaaactttg
    36781 gtagcagcca cgacatcatg gtccgtatgc cgcctgctga aggcgaaacc ggcggtcagg
    36841 tgctgggcag ccaggttctg aaggtgatta acgaatccac caatcagaat gcagcagtga
    36901 agcgtattga gttcgtcggt ccgagcgtgg gggaagacct tacgcaaacc ggtgcgatgg
    36961 cgttgatggc ggcgctgctg tctatccttg tgtacgtagg ttttcgcttt gagtggcgac
    37021 tggcggcagg ggttgttatt gcgctggcgc acgacgttat cattacgctg ggtattttgt
    37081 cgttattcca tatcgagatt gacctgacca ttgtggcatc gttgatgtcg gttatcggtt
    37141 actcgcttaa cgacagtatc gtggtatcgg accgtattcg tgaaaacttc cgcaagatcc
    37201 gtcgcggtac gccttacgaa atctttaacg tgtccttgac ccagacgctg caccgtacct
    37261 tgatcacatc cggtactacc ttgatggtta tcctgatgct gtacctcttc ggtggtccgg
    37321 tactggaagg cttctcgctg accatgctta tcggtgtttc catcggtact gcatcttcca
    37381 tctatgtggc atctgcgttg gctctgaaac tgggtatgaa gcgcgaacac atgttgcagc
    37441 agaaagtgga aaaagaaggg gcggatcagc cgtcaattct gccgtaatca agttcccgtt
    37501 gatgttgaaa atcccggtca gaagatcggg attttttttg atgtatggag attgcgaaaa
    37561 tccccgcatc ttgggaaact gcgcgtaacc ctacatttca tccaggtaac tcttcatggc
    37621 tatcatccca aaaaactatg cgcggttaga aagcggctat cgcgaaaaag cattaaaaat
    37681 atatccgtgg gtctgcggtc gctgttcccg cgagtttgtt tattccaacc tgcgtgaact
    37741 taccgttcac cacattgatc acgaccatac caataacccg gaagatggca gtaactggga
    37801 attgctttgt ctctattgcc acgatcatga gcattcgaaa tataccgaag cggatcagta
    37861 tggtacgacc gttatcgcag gggaagatgc gcagaaagat gtcggtgaag cgaagtacaa
    37921 cccattcgct gacctgaaag cgatgatgaa caagaagaag tgattaaaac gtaaaattgc
    37981 ctgatgcgct acgcttatca ggcctacgtt atttcagcaa tatattgaat ttacgtgctt
    38041 ttgtgggccg gacaaagcgt ttacgccgca tccggcatga acaaagctca cgttgttaac
    38101 aatcagaaat gccgggaata aatcccggca ttttcataat cagaagttgt aacctactac
    38161 caggtaacca ccccagccgg tagagcgaac gttgaagttg ccgttgccga agttcagttc
    38221 tgcatcgtcg ttccactgac caccgtcgtg ccagtaacga gctacgacag agtagtgcca
    38281 gtgatcgtag ttcagagcca gaatatggct ggaagcgata gagttattag tacgggtctt
    38341 aataccgttg attgcgttac cgctgtcatc ccctaaatcg gaaccccagt cgaagttggt
    38401 gaagccgatg tagctcagct gaccgcccca cagatcggta atcggcacaa agtatttaat
    38461 tttgaaacgg taaccgtccc actcgttttc gttcgctgcg ccatagttct gccactggta
    38521 tttcgcatag acgttcatgg acaggctcat cggcagatca gtatcgatgt cggtacccag
    38581 acccatgtac caggtgctct ggcgaccatt tttattacga cccatgtcgt aaatgtagtt
    38641 gttcgcgaag taccactctt tgaacggacc gaagttaagg tcagtattgg tcagcttgtc
    38701 gatggagaaa cgtggttcga tttccataaa cagcggagaa ccgtggttcc agataccttt
    38761 agcatcggag ttaccgccga agaataccgg cgcatccgca taaccataga agtcgaacca
    38821 gtctttttta gcgaatgctt cgtactcaag gtaggtatcg ttgcggatct gcggtccgaa
    38881 acgggtgtga tagcttccga caacgttaac gctctggtgc caccagtcgg aaagatactg
    38941 cggtttgtcg ttttcagctg cgttgacagt aaaagacgaa gagagcgcca gtaccgcacc
    39001 ggctgccagt aatgtttttt tcatatgtat gccactgttt gaaaatccct tgcgggagtg
    39061 aaaaaggcgc aaattgcgtt tctaaatatt tcgtatacag aggagcctat tataaaaatc
    39121 attgctcaca aaaatatgtt tcgtttcaca gttctatcat ttacgtaatc gattgcgttc
    39181 acgtttacac acattcgggc ggggattgta ctgactttcg cccttgttgc aaacttttac
    39241 tatcaatcca ggtgatgtaa gcagagtaac aaaatgacgg ggaaagatgt tgcgggacgc
    39301 acaaaatcgt cccgaaatac gtttactgca taacaggttg aatgtcgtgg atacgtacaa
    39361 agcctaactg atccacagaa atccccttta attgtaacgg aatatcaaca tcgctggggg
    39421 cgaggacgct ggcaggggca ttaatcaatt gattctgcac attgatttcc tgaaagttgt
    39481 ctattgttcc ctgaatttgc ccatattcaa cagttccgct gaatgcgggc aagggatcat
    39541 tcgactcacc ctgaatacgt agtgtaaggg tggtgccatc tgtatcaggc gtaatattca
    39601 ccagcgacat acgtaaagta ccgatctggc tttccagtct tgccggtgtt ttcgctccag
    39661 gcagaaggta acccccactg ctggattttg cattcagcct gttttgctga gtgattttga
    39721 ctgtttcttg attgagttgc gtcatctcct ggttcagcgt gctgacgctg tgtttcatct
    39781 gtcgcacttc actttgctgc acacaggcgc taaggctgaa caggcttccc agcaggagca
    39841 gtcgaaaaac gttagtattc ataggtcgtc cctttctcgt cgcaattagc ctaatggtag
    39901 agggtaaaag cagcgaaagc atcgatcctt tatctcaaaa gcgttgcgcc tttgttgtat
    39961 cgtcagttca gggtaaaata gatttccgtt aaccacttgg tcaggacgcc gtatgcattg
    40021 cccattctgt ttcgccgtgg acactaaggt aattgactct cgtctcgtgg gcgagggttc
    40081 atccgtacgc cgccgtcggc agtgtctggt gtgtaatgaa cgtttcacca cctttgaagt
    40141 ggcggagctg gttatgccgc gtgttgtaaa aagcaacgac gtgcgtgaac cgtttaatga
    40201 agagaaattg cgtagcggaa tgctgcgggc gctggaaaaa cgtccggtga gttccgatga
    40261 cgttgaaatg gcaatcaatc atattaaatc gcagctgcgc gccaccggtg agcgcgaagt
    40321 accgagcaag atgattggca atctggtgat ggagcaattg aaaaagctcg ataaagtcgc
    40381 ctatatccgt tttgcctctg tctaccgcag tttcgaagat atcaaagaat ttggcgaaga
    40441 gatcgcgcgc ctggaggact aagccgtgca ggacgagtat tacatggcgc gggcgctaaa
    40501 gctggcgcaa cgaggacgtt ttaccaccca ccccaaccca aatgtcgggt gcgtcattgt
    40561 caaagatggc gaaattgtcg gtgaaggtta ccatcaacga gcgggtgaac cacatgccga
    40621 agtacacgcg ttgcgtatgg cgggtgaaaa agccaaaggt gcaacggcgt atgtgacact
    40681 cgaaccttgc agccatcacg gccgtacgcc gccttgctgt gatgctttaa ttgccgcagg
    40741 tgtggcgcgc gtggttgcct cgatgcaaga tcctaacccg caggtcgctg ggcgtggact
    40801 ttaccgtctg caacaggctg gcattgacgt cagccacggc ctgatgatga gtgaagccga
    40861 gcaattgaat aaaggctttc tcaagcggat gcgcaccggc tttccttata ttcagttaaa
    40921 acttggcgca tcgcttgatg gtcgcacggc gatggcgagc ggcgaaagcc agtggatcac
    40981 ttcgccccag gcgcggcgtg atgtacaacg actgcgcgcg caaagtcatg ccattttaac
    41041 cagcagcgcc acggtgctgg cggatgatcc tgccttaacg gtgcgttggt ccgaactgga
    41101 tgaacaaact caggcgctct acccgcaaca aaatctccgc cagccggtac gtattgtgat
    41161 tgatagccaa aatcgcgtga cgccggaaca tcacattgtg cagcagcccg gcgaaacctg
    41221 gttcgcgcgt acgcaggaag attctcgtga gtggccggaa acggtgcgta ccttgctgat
    41281 tccagagcat aaaggtcatc tggatctggt tgtactgatg atgcaactgg gtaaacagca
    41341 gattaacagc atctgggggg aagcggggcc aacgctcgct ggcgcattgc tgcaggcggg
    41401 tttagtcgat gagctgattg tctatatcgc acctaaacta ttaggcagcg acgcccgtgg
    41461 attatgcacc ctgccagggc ttgagaaatt agccgacgcc ccccaattta aattcaaaga
    41521 gatacgtcat gtaggcccgg atgtttgcct gcatttagtg ggtgcatgat ctcccggctc
    41581 gaaagggaag cagcgcacga aatattatgc taaaatccgc ccccctgcgg ggccatactc
    41641 gaacccgaag gaagaaaatg aacattattg aagctaacgt tgctaccccg gacgctcgcg
    41701 tcgccatcac catcgcgcgt ttcaacaact ttatcaatga cagcctgctg gaaggtgcaa
    41761 ttgacgcact gaaacgtatc ggtcaggtaa aagatgaaaa cattaccgtt gtttgggtgc
    41821 ctggtgccta tgagctgccg ctggcggcgg gtgcactggc taaaaccggt aaatacgacg
    41881 cggtgattgc gctgggtacg gttattcgtg gtggcactgc ccattttgaa tatgtcgctg
    41941 gtggtgcaag caacggcctg gcgcatgttg cccaggacag cgaaattccg gttgcttttg
    42001 gggttctgac cactgaaagc attgaacaag cgatcgaacg tgctggcacc aaagctggca
    42061 acaaaggtgc agaagctgca ctgaccgcgc ttgaaatgat taatgtattg aaagccatca
    42121 aggcctgaaa ttagtaaggg gaaatccgtg aaacctgctg ctcgtcgccg cgctcgtgag
    42181 tgtgccgtcc aggcgctcta ctcctggcag ttgtcccaga acgacatcgc tgatgttgaa
    42241 taccagttcc tggctgaaca ggatgtaaaa gacgttgacg tcctgtactt ccgtgagctg
    42301 ctggccgggg tggcgactaa taccgcatac ctcgacggac tgatgaagcc atacctgtcc
    42361 cgtctgctgg aagaactggg acaggtagaa aaagcagtac tgcgcattgc gctgtacgaa
    42421 ctgtctaaac gtagcgatgt gccatacaaa gtggccatta acgaagcgat cgaactggcg
    42481 aaatcgttcg gcgcagaaga cagccataag ttcgtcaacg gtgtactcga taaagcagca
    42541 cctgtgattc gccctaacaa aaagtaatat ccaggccggt agattcacgg aagaccgttc
    42601 catgatcgcc ggccttttct tttttacctg ctgaggcata acgtatggca tgtggcgagt
    42661 tctccctgat tgcccgttat tttgaccgtg taagaagttc tcgtcttgat gtcgaactgg
    42721 gcatcggcga cgattgcgca cttctcaata tccccgagaa acagaccctg gcgatcagca
    42781 ctgatacgct ggtggcgggc aaccacttcc tccctgatat cgatcctgct gatctggcgt
    42841 ataaagcact ggcggtgaac ctaagcgatc tggcagcgat gggggccgat ccggcctggc
    42901 tgacgctggc attaaccttg ccggacgtag acgaagcgtg gcttgagtcc ttcagcgaca
    42961 gtttgtttga tcttctcaat tattacgata tgcaactcat tggcggcgat accacgcgtg
    43021 ggccattatc aatgacgttg ggtatccacg gctttgttcc gatgggacga gccttaacgc
    43081 gctctggggc gaaaccgggt gactggatct atgtgaccgg tacaccgggc gatagcgccg
    43141 ccgggctggc gattttgcaa aaccgtttgc aggttgccga tgctaaagat gcggactact
    43201 tgatcaaacg tcatctccgt ccatcgccgc gtattttaca ggggcaggca ctgcgcgatc
    43261 tggcaaattc agctatcgat ctctctgacg gtctgatttc cgatctcggg catatcgtga
    43321 aagccagcga ctgcggcgta cgtattgacc tggcattgct gccgttttct gatgcgcttt
    43381 ctcgccatgt tgaaccggaa caggcgctgc gctgggcgct ctctggcggt gaagattacg
    43441 agttgtgttt cacggtgccg gaactgaacc gtggagcgct ggatgtggct ctcggacacc
    43501 tgggcgtacc gtttacctgt atcgggcaaa tgaccgccga tatcgaaggg ctttgtttta
    43561 ttcgtgacgg tgaacctgtt acgttagact ggaaaggata tgaccatttt gccacgccat
    43621 aaagatgtcg cgaaaagtcg cctgaagatg agtaatccgt ggcatctact tgctgtcgga
    43681 ttcggaagtg gattaagccc gatcgttcct gggacgatgg gctcgctggc agcgattccg
    43741 ttctggtatc tgatgacctt tttgccctgg cagctctact cgctggtggt gatgctgggg
    43801 atctgtatcg gcgtctatct ttgtcatcag accgcaaaag atatgggcgt gcacgatcac
    43861 ggcagcattg tctgggacga atttattggt atgtggatca cgctcatggc gctgccgacc
    43921 aatgactggc agtgggttgc cgccgggttt gtgattttcc gtattctgga tatgtggaaa
    43981 ccgtggccga tccgctggtt tgatcgcaat gtgcatggcg gcatggggat catgatagat
    44041 gatattgtcg ccggggtgat ctccgctggc atcctgtact ttattggtca tcactggccg
    44101 ctgggcattc tgtcgtagtt gtgcaccgat gcctgatgtg acgcttgttg cgtctcatca
    44161 ggcctggact cttatttaaa tcctactacc ggatgcggtt tatacggcgt ttccagttcg
    44221 gcaatctgtt ccggcttcaa agtgatatcc accgcgttca atagctcatc aagctgttct
    44281 tcccgcgatg taccgataat cggtgcggca atgcccggtt tactcaacaa ccaagccagc
    44341 gcaacttgtg ctcgtgttgc accgagttct tcactgacgc ccgttaaccg ctctgcgatc
    44401 tgcgcgtcat tttcatcgct ttctttatag agatttttcc ccacctcatc agacaccagt
    44461 cgtgcggtag tttctcccca cggacgcgtc agtcgccccc gcgccagcgg gctccacgga
    44521 atcaccgcca cgccctcctg ataacacagt ggcagcatct cgcgctcttc ttcgcgataa
    44581 atcagattgt agtgatcctg catactgaca aactgcgccc agccgtgctg tttttggagt
    44641 tccagtgcct gagcaaactg cgaagcgtgc attgatgacg cgccgatata acgcgctttc
    44701 ccggctttta ccacgtcgtt cagggcttcc agcgtctctt cgatcggcgt gttgtaatcc
    44761 cagcgatgaa tttgcaggat atcgacataa tccatgccga gacgtcgcag gctgtcgtcg
    44821 atagagcgca aaatttgtgc acgggataat ccttccggta aatcaccaac gcgatggaac
    44881 actttggtgg caacgaccac gtcttcacga cgggcgaaat cccgcagtgc gcgaccaacg
    44941 atctcttcgc tgctaccatc ggaatagcta ttggcggtat caaagaaatt tatgccgcct
    45001 tccagtgcgc gtttaattat gggacggctg ctctcttccg gcagtgtcca tgcgtgatta
    45061 ccacgatctg gctcgccaaa ggtcatacag ccgaggcaaa gtcgggaaac gcgaaggtcg
    45121 gtttttccta aggggttgta ttgcatgctg ccactcctgc catgaataat ttcttaagca
    45181 tagcaggagt ggagtaggga ttatgccagc caggccttga ttttggcttc cataccggcg
    45241 gcatcgaggc cgagttcggc gcgcatttct tcctgcgttc cttgcggaat aaagaagtca
    45301 ggcaggccaa tgttcagcac ggggactggt ttacgatggg ccattagcac ttcgttcact
    45361 ccgctgcctg caccgcccat aatggcgttt tcttctacgg taaccagtgc ttcatgactg
    45421 gcggccattt ccagaattaa cgtttcatca agcggtttca caaaacgcat atcgaccagc
    45481 gtggcgttca gcgattcggc gactttcgcc gcttctggca tcagcgtacc aaagttaagg
    45541 atcgccagtt tctcgccacg acgcttcaca atgcctttgc caattggtag tttttccagc
    45601 ggcgtcagtt ccacgccgac cgcgttgcca cgcgggtagc gcaccgctga cgggccatcg
    45661 ttatagtgat agccggtata gagcatctgg cgacattcgt tttcatcgct cggggtcata
    45721 atgaccattt ccggtatgca gcgcaggtaa gagagatcaa aagcaccctg atgggtttga
    45781 ccgtcagcac caacaatgcc cgcgcggtcg atggcgaaca ggaccggaag cttttgaatt
    45841 gccacgtcat gcagcacctg atcataggcg cgttgcagga aagtggagta gatcgcgaca
    45901 atgggtttgt acccaccaat cgccagaccg gcggcaaagg tcactgcgtg ttgctcggca
    45961 attgccacgt cgaagtagcg atccgggaat ttacgagaaa actcgaccat gccggaacct
    46021 tcacgcatcg ccggagtaat cgccatcagc ttgttatctt tcgccgccgt ttcgcacaac
    46081 cagtcgccaa agatttttga atagctcggt aaaccgccgc tacttttcgg caaacaaccg
    46141 ctggagggat caaatttagg cacggcgtgg aaagtgattg ggtctttttc tgccggttca
    46201 taaccacgac cttttttggt catgatatgc aggaactgcg ggcctttcag gtcacgcatg
    46261 ttcttcagcg tggtgataag ccccagcaca tcgtgaccgt caaccgggcc gatgtagtta
    46321 aagcccagct cttcaaacaa cgtgccaggg actaccatgc ctttaatatg ttcttcggta
    46381 cgtttgagca gctctttaat gggtggcacg ccagagaaaa cttttttccc gccttcgcgc
    46441 agtgaagagt aaagcttacc ggaaagcagc tgcgccagat ggttgttgag cgcgccgaca
    46501 ttttcggaaa tcgacatttc gttgtcgttg aggaccacca gcatatcagg acggatatcg
    46561 cccgcgtgat tcatcgcttc aaacgccatg cctgcggtaa tcgcgccatc gccgattaca
    46621 cagacggtac ggcgattttt gccttctttc tcggcagcaa ccgcaatacc aattccggca
    46681 ctgatggagg ttgatgaatg cccgacgctt aatacgtcat attcgctttc gccgcgccac
    46741 gggaacgggt gcaggccgcc tttctgacgg atggtgccga ttttgtcgcg gcgtccggtc
    46801 aaaattttat gcggataagc ctgatgcccc acatcccaaa tcaattggtc aaacggggtg
    46861 ttgtagacat agtgcagcgc cacggtcagt tcgaccgtgc ccagcccgga ggcgaagtgc
    46921 ccgctggaac ggctcacgct gtcgagtaaa tagcggcgca gttcgtcgca gagtttcggt
    46981 aaactctctt tcggcaacag tcgtaactcc tgggtggagt cgaccagtgc cagggtcggg
    47041 tatttggcaa tatcaaaact catcaggggc ctattaatac ttattgttta tttattacgc
    47101 tggatgatgt agtccgctag cgcttccagt gccgaggtat cgggtgactg ttcagccagt
    47161 tgtttcagcg actgacgggc atcgtcgatc agatcccggg ctttcttccg ggcttgctca
    47221 agacccagaa gtgcagggta ggtactttta ccaagttgct ggtcggcacc ctggcgtttt
    47281 cccaacgttg cagtatctcc taccacatcc aggatgtcat cctgaacctg gaaggcaagg
    47341 ccgatgctct ctgcgtactt gtcgagtact ggcagagcac gacgcccttt atctccggcg
    47401 cttaatgcac caaggcgaac ggcggcgcga atcaatgcgc cggttttatg acgatgaata
    47461 cgctcaagcg cgtccagagg tacgtgtttg ccttccgcgt ctaaatctaa tgcctgacca
    47521 ccgcacattc cggcaatacc gctggcgctc gccagttcag aaatcatcga aattctgtcg
    47581 cgatccgaca cttccggcat atcagcatcg cttaaaatcg agaacgccag cgtttgtaaa
    47641 gcgtcgccag cgagaatcgc gtttgcttcg ccaaacttca catggcaggt cggcaaaccg
    47701 cgacgcagat cgtcatcatc catcgccggt aaatcatcat gaattaatga gtaagcgtgg
    47761 atacactcta cggcggcagc gggtgcgtcc agcgtgtttg tgctaacgcc aaacatatga
    47821 ccggtggcat aaaccaggaa gggtcgcaga cgcttaccac ctaataatgc accatactgc
    47881 atggtttcga ccacgggagt gttctgaaag ggcagtgggg cgataaaacg gctcagcgcc
    47941 tggttggcct gcttaacgca ggcttcgagt tgctgcggaa agtccattac tcattgtccg
    48001 gtgtaaaagg ggttagagag gcgtcttcat tgtcagacag cagaatttgt acgcgctgtt
    48061 cggcttgttg taatttggcc tgcccctgac gtgccagctg cacgccgcgt tcgaactcgt
    48121 tcagcgcctc ttccagcggc aggtcgccac tttccagacg ggttacaatc tgttccagct
    48181 cgctcagcgc cttttcaaag ctggcgggag cctcattttt cttcggcata atgaatgtct
    48241 gactctcaat attttttgcc ccgtcatggt aacggactca gggcaaatag caaataacgc
    48301 gcaatggtaa ggtgatgtgc gcagcaaagc gatgttagtg gtatacttcc gcgcctggat
    48361 gcagccgcag gtgtgggctg ctgtattttt ccctatacaa gtcgcttaag gcttgccaac
    48421 gaaccattgc cgccatgaag tttatcatta aattgttccc ggaaatcacc atcaaaagcc
    48481 aatctgtgcg cttgcgcttt ataaaaatcc ttaccgggaa cattcgtaac gttttaaagc
    48541 actatgatga gacgctcgct gtcgtccgcc actgggataa catcgaagtt cgtgcaaaag
    48601 atgaaaacca gcgtctggct attcgcgacg ccctgacccg tattccgggt atccaccata
    48661 ttctcgaagt cgaagacgtg ccgtttaccg acatgcacga tatttttgag aaagcgttgg
    48721 ttcagtatcg cgatcagctg gaaggcaaaa ccttctgcgt acgcgtgaag cgccgtggca
    48781 aacatgattt tagctcgatt gatgtggaac gttacgtcgg cggcggttta aatcagcata
    48841 ttgagtccgc gcgcgtgaag ctgaccaatc cggaagtgac tgtccatctg gaagtggaag
    48901 acgatcgtct tctgctgatt aaaggccgct acgaaggtat tggcggtttc ccgatcggca
    48961 cccaggaaga tgtgctgtcg ctcatttccg gtggtttcga ctccggtgtt tccagttata
    49021 tgttgatgcg tcgcggctgc cgcgtgcatt actgtttctt taaccttggc ggcgcggcgc
    49081 atgaaattgg cgtgcgtcag gtggcgcatt atctgtggaa ccgttttggc agctcccacc
    49141 gcgtgcgttt tgtcgctatt aatttcgaac cggtcgtcgg ggaaattctc gagaaaatcg
    49201 acgacggtca gatgggcgtt atcctcaaac gtatgatggt gcgtgccgcg tctaaagtgg
    49261 ctgaacgtta cggcgtacag gcgctggtca ccggcgaagc gctcggccag gtgtccagtc
    49321 agacgctgac caacctgcgc ctgattgata acgtctccga tacgctgatc ctgcgtccgc
    49381 tgatttctta cgacaaagag cacatcatca acctggctcg ccagattggc accgaagact
    49441 ttgctcgcac gatgccggaa tattgcggtg ttatctccaa aagcccgacg gtgaaagcgg
    49501 ttaagtcgaa gattgaagcg gaagaagaga aattcgactt cagcattctc gataaagtgg
    49561 ttgaagaagc gaataacgtt gatatccgcg aaatcgccct gcagaccgag caggaagtgg
    49621 tggaagtgga aaccgtcaat ggcttcggcc cgaacgacgt gatcctcgat atccgttcta
    49681 tcgatgaaca ggaagataag ccactgaaag tcgaagggat tgatgtagtt tctctgccgt
    49741 tctataaact gagcaccaag tttggcgatc tcgaccagaa cagaacctgg ctactgtggt
    49801 gtgagcgcgg ggtgatgagc cgtctgcagg cgctctatct gcgcgagcag ggctttaaca
    49861 atgtgaaggt atatcgcccg taatttgtgg ttgtaacgtc gcatctggtc agatgcgacg
    49921 cttaccgcat ccgacactac tcgtaataat tataaatccc tgccgccatc accagttgtg
    49981 atgccacttc atgggctttc tcgcgcccaa cctgcaggtc gataattttc agaccaaagt
    50041 cgatagctgt ccccggcccc tggctggtca gcaattttac ccgtgcatcc cagacgacgc
    50101 gcttgtcctg ccattgttca gcgggaattt tgtctttcag cgtcgggaag ccggtcatat
    50161 taccaatcgg gaagatatcg tgcggcacca gcacggtggc tggcgcggcg caaatagccg
    50221 cgacgatacg cccggaacgg tggaactgtt taacggtttc aaccagcaga gtgctatcgc
    50281 gaaaacactc tgcgccttta atgccaccag gcagtacgat cacgtcatat tcgccatcag
    50341 ccacctcgac cagcggcgca tccgccagca gcttcacgcc gcgcgagcag gtaattgcca
    50401 ggttgccatc gctggctacg ctggcagtgg tgactttgat accgccgcga accaagaggt
    50461 cgatcgtggt gacggcttca gtctcttcac taccaggggc gaggcaaacc agtgccgatg
    50521 cgctcatatt cactctcctt tctttttacc atttcaaaca ggcgggtgtt ttccggtacg
    50581 gcaatcccat gcgcgcgggc gcggcgtaag agaaaaccat tgatatagtc gatttcggtg
    50641 tggcgcagcg cgcggatatc ctgcaacatc gacgagatat tttccgctgt ggcatcaatc
    50701 acctgcatca cgtaatcacg caaatcttcc gctgaagtat gatgcccttc gcgttcgatc
    50761 actgccgcga cttcttcgca tatttgcata atttcttgcg gatgatgacg taattcaccg
    50821 ttcgggcaat tccagatggc ggtcagtgga ttaatcacgc agttgactgc cagcttgcgc
    50881 cacagctcgg cgcgaatatt gttatgccag gcaacgtcag gcaacacggt ttgtaaaata
    50941 tccgccagat aactgtaatc gccatcctgt tgccgtgccg gaccaatatg cgtgataccg
    51001 tttgccacat gaataatgac attgccgtcg cggcgggcgg catgggtggt ggtgcccatc
    51061 agtaatggct gctgaatatt ttgcaactct tcgatggtgc ccatgccgtt gtgaattaac
    51121 agtattggcg tggttacagg cagtgtggac gcgaggcttt tgacggcatc ggaaacctgc
    51181 catgctttca gcgtcaccag gagcagatcg ctggtggcga gaaaatcggg atcgttggcg
    51241 gtcagcgatt cgttaaatat cgaaccatct gtctcaacca gattcgcact acaataaggt
    51301 tgcggtacgc gcagccagcc ctgaacttca tgaccctgtt tgcaaagtgc tgtaagccat
    51361 aattgcccta aggcaccgca tcccaatacg gtaattttca ttgttcctcc tcacccgcaa
    51421 ccactccggg tgttcaataa ggctatccct taattgtgca tgctgttgcg actatgcaca
    51481 attaagggat acgtcctggt gcaggactgt cggttattta actttgcggg tattatgctt
    51541 cgcatcaaaa atgaagggag aggaaaagat gccatctttc gatattgtct ctgaagttga
    51601 tcttcaggaa gcacgtaacg cggtcgataa cgcgagccgc gaagtggagt cccgttttga
    51661 cttccgtaac gttgaagcct catttgagct gaacgacgcc agcaaaacca tcaaagtgtt
    51721 gagcgagtcc gatttccagg tcaatcagtt gctggatatt ctgcgtgcca agctgctgaa
    51781 gcgcggcatt gaaggcagtt cactggatgt accggaaaat atcgttcata gcggtaaaac
    51841 ctggtttgtg gaagcgaaac tgaagcaggg cattgagagc gcgacccaga aaaaaatcgt
    51901 caagatgatc aaagacagca aactgaaagt gcaggcgcaa attcagggcg atgagatccg
    51961 cgtgactggc aaatctcgtg atgatttgca ggctgtcatg gcgatggtgc gcggtggcga
    52021 tctgggtcag ccgttccagt tcaaaaactt ccgcgattaa tcgcgacaac ctgcgctttg
    52081 ttcatgtcag atgcggcatg aacgcctggt tcggcctaca aaggcttgta aatcaggagc
    52141 ttagtaggcc tgatgagcgt agcgcagcag gcaatttcgc ctcgctttta tgcctggcga
    52201 attgcctgtt caacatcaaa gcgattcgtc actttgctgt cgattttcac ataagctgaa
    52261 tgttcttctt ctgcaatcaa cacttctttg atgccttcag tttctagcaa acgcactttt
    52321 aacgcctcgt ttgcggcaat gttcgccggg atttcaatgc gcaaactgct gacatacgcc
    52381 ggttctttca tggtactggc gactgccagc cacactgcgg ccagcattgc gccagcgaga
    52441 aatacgccct gaccgtcaaa catgccgtca atccagccgc ccagtgaacc gccaatcgcc
    52501 acgccaagaa actggctggt ggagtaaaca cccatcgctg tacctttgta acctgctggc
    52561 gactctttac tgataagtga aggcagaagg gcttccatca aattaaacgc tacaaagaaa
    52621 agctgcacgc cgaccaccag ttgccagaac tgcgtttgcg cgttccacaa cacaatttcc
    52681 gcaaccacga tcaatccgac gcagaagaca aagacttgct tcattttgcg cttaacttca
    52741 gcgtagataa tgaaaggcac gaccgagcca aaggcgatta gcattgtcgc cagatagacc
    52801 ttccagtgtt cagccgccgg gaaccctgca tcagccagtt gtccgggcag ggcaacaaac
    52861 gtcgacatca gcaaaatatg cagacacata atgccaaagt tgagtttcag cagccgcggt
    52921 tccgccagca ctttactgaa actgcctttc accattccgg actcacgatt aagtacgtga
    52981 gtgctactgt tgggcacaac ccaaatggtc aacgcaatgc cggtcgttgc cagaatagcg
    53041 atcatccaga acagcgcgtg cagcccaagt ttgtgagtga tgatcgggcc aagcaccatc
    53101 gcaatggcaa aggtaatgcc aaagctcacg ccgataaacg ccattgcttt ggtgcggttt
    53161 tgttcgcgcg tgagatcgga aagcagcgcc ataacggcag cggcaatcgc accggagcct
    53221 tgtagcgccc ggcctagaat aattccccag atggagtcag agagcgcagc gataacgcta
    53281 ccggcggcaa acaccgccag cccaccgaca attaatggtt tgcgaccaat acggtcggaa
    53341 agcaggccaa acggaatctg aaaaacggcc tgagtcagac cataaatacc aatggcaata
    53401 ccgattaatg cttcgctggc accttgcaga gccatgccat acgtggtcag aaccggcaga
    53461 accataaaca tgcccagcat gcgcaacgag aatacggtcc ctaaacccca ggtcgcgcgc
    53521 ctctcacctg gcgtcatttt ataatcgttc attaccacct ctgttttaaa ttcgcgacta
    53581 gtgtaaagcg gcaaacgaat ggggtaaaca tgcggatttt ttagtaaata tttcgagagg
    53641 gatatgtttc taatgctaag aaaaaaggtg ccgtagcacc tttttaatag agaggttttg
    53701 ttaccacaca gcagccagca gcgtatgcga gtccggtacc ataaaatcaa cggacatcat
    53761 caccgagagg gcagtgatgg cgatgataga gaagccgaac agcttgcgcg cccagattct
    53821 gtcatcagca actttataac cgcgcagagc catacctaac caccagacgc taaccgccgc
    53881 ggcgaccacc agatatttat atccagcgta accgccaaga gagagcatca gcgtggcaac
    53941 ggcaaaggcg atgatataca gcgtgatgtg attcttcgcc accgaaatgc cttttaccac
    54001 tggcaatacc ggaatgtttg ccgcctggta atccttaaag cggaaaatgg cgatggcata
    54061 ggagtgaggc atctgccaca ggctgaagat agccagcagg atcgctgcgc cgctatcgaa
    54121 ctcgccggtt actgcacagt agccaatcac cggcggcgca gcgccggaga gcgaaccaat
    54181 caatgtgccg tagactgagt ggcgtttcat gtacaggcta tagacgccga cataaaccac
    54241 aaagcccatc acccccagcc agcaggccag cggattcgcg ccaaaccaca gcagcataaa
    54301 gccagcaata cccagcaagg tggcgtacac cagtgagaca gcaggagaga tcaggccttt
    54361 aaccagcacc cgattcttcg tcctttccat ctttctgtcg atatccctgt cgatgtagtt
    54421 gttaaacaca caacccgacg ccacaaccag tgacacccca accagcgtgt agataaacag
    54481 gggataatca atgctgccct ttgaggccag caggaatccc ccaatcaccg agatcaggtt
    54541 gccaaagatg atgcctggtt tcgttacttg caggtattgc ttaaacatca taaccgccgc
    54601 tcttagtgca tcatcatgtt gtagttgagg ttccacataa tccagatgga gcctacaacc
    54661 aggatagtga tgattagcac ggtgaagaca aacgccgtca tgttccagcc ttcatctgat
    54721 ttggtattca tgtgcaggaa gcacaccaga tgcaccagaa cctgtaccac tgccattgcc
    54781 aggattgttc ccagaattac ggccggagag gcagcccctg tcatcaccat ccagaacgga
    54841 atcaccgtca gaatgatcga caggataaag cctgtcatgt aggtttttac gctgccatgg
    54901 gacgcgccgc tgtgatcggt agaatgactc attacatcgc ccccatcaga taaacaacag
    54961 tgaacacaca gatccaaacc acatccagga agtgccagaa caggctcagg cacatgatgc
    55021 gggtacggtt agtgctggtc aggccgcgac gagcgatttg taccatcagc accgccatcc
    55081 agataagacc ggaagtgacg tgcagaccgt gcgtgccgac cagcgcaaag aacgctgaca
    55141 ggaagccgct gcgatccgga cccatgccgt taacaatcag gtgatggaat tcgtagattt
    55201 ccatcccgat aaatccggca ccaaacaaac aggtcaacgc cagccaggag ataacctggc
    55261 ttttgttgtt tttgtacatg gcgatagccg ccatgccgta ggtgatggag ctgaacaaca
    55321 gcaagaaagt ttcaaccaga acgaacggca gttcgaaaat gtccttacct gtcgggccgc
    55381 ctgcggtgcc gttcaccaga acggcatagg tagcaaacaa gattgagaac agaatgcagt
    55441 cgctcatcag gtagatccaa aatccgaaga ttttggttcc gcctgcatcg tggtgcccgt
    55501 gttcgtgcgc gtgggcagtc gcgtgcgtca aagtatcagt tgccattttt cagccctgcc
    55561 ttagtaatct catcgaaatg ctggttttcc agtttttcga tttctgccac cggcacgtag
    55621 taatccacgt cctcgtcgaa gcttttcacg atccaggtga tgatcatgcc tgcgaagcca
    55681 acaatcgcca gccaccagat atgccagatc atggcgaaac cgaagatggt ggagaaagct
    55741 gcaatgacga tacctgcacc gctgtttttc ggcatatgaa tttcttcata gtggtcaggc
    55801 tttttatacg cttcgccttt ctctttcatt tcccagaatg catcacgctc gtgaacgtgc
    55861 ggcacaacgg caaagttata gaacggaggc ggggaagagt ttgcccactc cagcgtacgg
    55921 ccaccccacg ggtcgccagt caggtcacgg ttctggtcgc ggtcgcgaat agaaacgtac
    55981 atctgaataa cgaggcagag aatacccagc gcaatcagta ctgcaccgct agctgcaatc
    56041 atcagcatgg tgtggaactg cgggtcaatc tgctggctca aacgacgggt catgcccatg
    56101 aagcccagcg catacagcgg cataaaggca acgaagaagc cgatgatcca gaaccagaac
    56161 gcgcgtttac cccaggtttc attcagtttg aaaccgaacg ctttaggcca ccagtaggtc
    56221 atccctgcga agcagccgaa gaccacgccg ccgatgataa cgttatggaa gtgcgcaatc
    56281 aggaacaggc tgttatgcag aacgaagtcc gcgcccggta ctgccagcag cacgccagtc
    56341 atcccgccca ccgagaaagt gacgataaaa ccgatggtcc acagcatcgc agaatggaac
    56401 acgatacggc cctgatacat ggtgaacagc cagttgaaga tcttcacccc ggtcgggatg
    56461 gcgataatca ttgtggtgat accaaagaag gcgtttacgt tcgcgcccgc acccatcgta
    56521 aagaagtggt gcagccaaac gatgaacgac agcacggtga tacagacggt tgcccatacc
    56581 agcgaggtat aaccaaacag acgtttacgc gagaaggttg ccgcaatttc ggagaacaca
    56641 ccgaaaacag gcaggatcag gatgtaaact tccgggtggc cccaggccca aatcaggttg
    56701 atgtacatca tcatgttgcc acccatatcg ttggtaaaga aatgggtgcc cagatagcga
    56761 tccagggtca acaacgcgac ggtaaccgtc agaattggga aggaagcaat aatcagtacg
    56821 ttcgcgcaca gtgatgccca ggtaaatact ggcatcttga acatggtcat gcccggtgcg
    56881 cgcatcttca gaatggtaac gaagaagttg ataccggtaa gcgtcgtacc tataccggat
    56941 agctggagac tccatatcca gtaatcaaca ccgactcccg gactgtactc tattcccgat
    57001 agcggtggat aggccagcca gccggtctgc gcaaattcgc ccacgccgag agaaacgtta
    57061 accagaatca caccaacaac agtaaaccag aagcttaagt tgttgaggaa cgggaacgca
    57121 acgtcacgcg cgccgatctg cagcggaacc accaggttca tcagaccgat aacgaaaggc
    57181 atcgccacga agaagatcat aatcacgccg tgcgcggtga agatctgatc gtagtggtga
    57241 ggtggcagga agcccgcttc gcccgccgag gcaagagcct gctggctacg catcataatg
    57301 gcgtcagcaa aaccacgcag caacatcaca atcgccacga tgatatacat gataccgagg
    57361 cgtttatggt cgacggaggt cagccactct ttccacaggt aggtccactt accgaagtaa
    57421 gtgatcaggc caacgagcgc cagacctccc aaaataatgc cagcgatcgt aaccatgacg
    57481 ataggttcat ggaacgggac tgcatcaagt gataattttc cgaacatctt tattcttcct
    57541 caaccccttt aatgggcgga ttccgcgtgg ctcatgtcca tgccttccat accttcgtgt
    57601 gcgctgtgct caccttctgg ctgggtcatg tccatgctct taccgtgagc cataaacttg
    57661 ttaatcacat cagcaaacaa gtctggtttc acgttggaga aatattccac ctggttgtat
    57721 tcgctaggcg cggccagttt ttcgaacgca gccatgtcag acatggtgtt cggcgactgc
    57781 ttcgcttttg cgacccactg gtcgaattcg gcgcgatccg gtgttgcaat agctttgaac
    57841 ttcatgcctg agaagcccgg gccgctgtag ctggcggaga taccgtcata agtaccgggt
    57901 tcgttggcga tcagatgcag gcgagtctgc ataccagcca tggcataaat ctggctaccc
    57961 agacgcggaa tgaagaagga gttcatcacg gagttggagg tcactttgaa gtacaccgga
    58021 gtgttcgccg ggaaagcgat ttcattcacg gtagcaatgc cctgttccgg gtagatgaag
    58081 aaccatttcc agtccatgga aaccacttcg atggtaatgg gcttctcgtc gtgtgccagc
    58141 ggcttgctag gctcaagagc gtgagtggtt ttccaggtca gtaccgcaag gaagatgatg
    58201 attaagatag gtaccgtcca gaccacagct tccactttat tggagtgtga ccagttcggg
    58261 ctgtacttag catctttatt gctcgcacga tacttccagg cgaaaccaac agccatcaag
    58321 attgcgggaa taacgacaat caacatcagg ccaaatgccg tcagtatcag tgaacgttgc
    58381 tccagaccaa tctgtccttt gggatctaac agcgcagaat tacagccact gagcaataca
    58441 gtgcctgcaa ataatgacaa ccatcccaaa cttttattgt atttcctgag tctcatttaa
    58501 cgacctcaat tccacgggat ctggtggcgt ttaaagtgtg tgggcatttt atgggaaggt
    58561 tacattactg taaacatgat taaattcctg ttacttggat ttgattgtca ggtcacatat
    58621 gttgcaaaac atatcaagtt gattttaaga agctgttgca aaagggcgtt ataacgaaag
    58681 gggagtgcag aaggagtttg gatgggcaat tggtataacc aatctggaat aaaataattg
    58741 tttaacaaat aattatcatt atggtgacaa ttgggtgggg ggaaaataaa gactcgttag
    58801 ctgaatcgtg taagaaaaaa tagaattcat aaattgcgtc aataatttcc aaacgctaag
    58861 ccgcacaaaa gaacaaatat tattaagcga tactgatgtt tatttagccg taataattac
    58921 ggcgagtgat tactacagct aaataatatt tacagattac gtcagatgcg tttttcgtag
    58981 agccagataa tccagcaaac caccaagcac gacgccagaa agggcgacta aaaccccgac
    59041 ttccagcaga gcaggcagga aagagaagtg cgtcaaatcc agcgcgtcca ttgtcaacag
    59101 cagtaaccac acggccaaca ggctgacgcc cgccgccagt gtccacatgg caaaggcata
    59161 acctgccgga tattcggtac gggagataaa gttgtcattt actcgtgtat attcaagcgt
    59221 ctggcggcaa accagcagca aaataagccc cggtacggca gcggcgacgg agaatagata
    59281 gaatgtcgac cagccgtgtg cttcaacaaa ccaacccgcc acggggccga cataaactcg
    59341 tcctacagcg gaaagcgctg agagcagggc aaattgagta gcggaaaatg acttattaca
    59401 cagcgtcatt aacagcgcga caaaggctga tgtgcccatc ccgccacaga ggttttcgaa
    59461 aaagacggct gcgcccatgc tgtagagatg cttatcagta atcgacagca gccagtaacc
    59521 agcgttagac gcaccttgta aaatgccgaa aatcagcagc gcccggaaca gcgacaggcg
    59581 ctgcatcaaa atcccaccgt acaatgcgcc cacaatggtc gccagtaagc caagcgtttt
    59641 gttaaccacg cctacttcac ccgcatcaaa cccgacgccg cgaatcaaaa acgtggttgt
    59701 caggctcatg gcgaatgcgt cgcccagctt atacagcacg ataagaagca aaataagcca
    59761 ggcattattg cgaccaaaga aatctcgcag aggtgcaaca accgcttgtt ccagcgtttt
    59821 tggcacagga atggtgtcgg tcggttctgg tgcaagcaac gtcgcgataa tacaagggat
    59881 caacagcgcc gccatcaacc agtacatgcc ctgccagccc agccatttat ctgccagcca
    59941 cagggctaag ccgccggaaa ccagcatccc taaacggtaa cccagcacgc tgattgccgc
    60001 gcccgcacca cgttcttctg ccgggagcac atcggttttc cacgcatcga agacaatatc
    60061 ctgggaggcc gagcaaaaag cgatcaccac cgccagtgcc gccatccagc ggagttgggt
    60121 gccaggttcg agaaaaccca tcgccgcaat ggcgactaat aacaggattt gcgtggcgag
    60181 cagccaaccg cgccgccgcc caaaaaatgg gggcgtgtag cggtccatca gcggtgacca
    60241 gaggaattta aaaacgtaag cctggcctac cagagagaag aaaccaatgg ttttgagatc
    60301 aatattctcg accgtcatcc aagcctgtaa ggtaccggat gtcagggcga gcggtagccc
    60361 ggaagcaaaa cccaggatca gcaatatggc tgaacgcggc tgttgaaaaa tacgtaaata
    60421 ttgactggac atgggcgtct acaggcccgg tttgcaccgg gccagagggc agaaattaac
    60481 gcgcgttctg cttgatgaat tcgtgaatgc tggtgtcctg agacatatca gcgatggtat
    60541 cggtcagcac actgttaacc gcatcggcga tatttttgtt ggaggcctgg aacgcacctt
    60601 caacgttgta gctggcacga tagtttttgg ttattttgtt gccattctgc gcggtagcga
    60661 tgatggcgat atccgctttg gtagcgatgt tgtagcgcac gttgccctgg gacacgtcag
    60721 catacagttg gctaacgatg atttgcagat taaccgggcc attcggacca accatgtaac
    60781 cacgcgcggt catctgtttt tccagcactt cttgcagcag gaaacgcaga tcgcgggagg
    60841 cggccagggt aacgatttga ttatcgcggg tgacttttgc cagcgcctga tcggtacgct
    60901 gatcggcacc attaatgctt acggtgacgc ccatcaggct tggatcctgc tgtggcagtg
    60961 taatcgtcgg ggaaacttca atagttgttg gcggttttgc gcatcctgca agcataaaca
    61021 gagcaactaa cgggaagagg atttttttga acatgttcgg gctctcagag actcttaagc
    61081 gtgtttggta aaaattcccg ccatcataac attgccaacg gcgaggggaa gtgggtaagg
    61141 catgtaaatt catcatgttg acgaaataat cacccctggt aaaagaaacg ctgatgcgag
    61201 gcctgtgttt caatctttaa atcagtaaac ttcatacgct tgacggaaaa accaggacga
    61261 aacctaaata tttgttgtta agctgcaatg gaaacggtaa aagcggctag tatttaaagg
    61321 gatggatgac atctcagcgt tgtcggagga gatatttcat gatgatacgt gagcggatag
    61381 aagaaaaatt aagggcggcg ttccaacccg tattcctcga agtagtggat gaaagctatc
    61441 gtcacaatgt cccagccggc tctgaaagcc attttaaagt tgtgctggtc agcgatcgtt
    61501 ttacgggtga acgttttctg aatcgtcatc gaatgattta cagtacttta gcggaggaac
    61561 tctctactac cgttcatgcg ctggctctgc atacttacac tattaaggag tgggaagggt
    61621 tgcaggacac cgtctttgcc tctcctccct gtcgtggagc aggaagcatc gcgtaaaaac
    61681 gcatttgcaa ctgtcggcgc tttttcagta tgttgctaaa gattttatga aaaacggcct
    61741 gcgggccgtt ttgttttgtc tggattttgc gctttttgcc cagcattcag acgaaaattg
    61801 cccgggaatt gtgaaaaaat acgcgacagc gcgcaataac cgttctcgac tcataaaagt
    61861 gatgccgcta taatgccgcg tcctatttga atgctttcgg gatgattctg gtaacaggga
    61921 atgtgattga ttataagaac atcccggttc cgcgaagcca acaacctgtg cttgcggggt
    61981 aagagttgac cgagcactgt gattttttga ggtaacaaga tgcaagtttc agttgaaacc
    62041 actcaaggcc ttggccgccg tgtaacgatt actatcgctg ctgacagcat cgagaccgct
    62101 gttaaaagcg agctggtcaa cgttgcgaaa aaagtacgta ttgacggctt ccgcaaaggc
    62161 aaagtgccaa tgaatatcgt tgctcagcgt tatggcgcgt ctgtacgcca ggacgttctg
    62221 ggtgacctga tgagccgtaa cttcattgac gccatcatta aagaaaaaat caatccggct
    62281 ggcgcaccga cttatgttcc gggcgaatac aagctgggtg aagacttcac ttactctgta
    62341 gagtttgaag tttatccgga agttgaactg cagggtctgg aagcgatcga agttgaaaaa
    62401 ccgatcgttg aagtgaccga cgctgacgtt gacggcatgc tggatactct gcgtaaacag
    62461 caggcgacct ggaaagaaaa agacagcgct gttgaagcag aagaccgcgt aaccatcgac
    62521 ttcaccggtt ctgtagacag cgaagagttc gaaggcggta aagcgtctga tttcgtactg
    62581 gcgatgggcc agggtcgtat gatcccgggc tttgaagacg gtatcaaagg ccacaaagct
    62641 ggcgaagagt tcaccatcga cgtgaccttc ccggaagaat accacgcaga aaacctgaaa
    62701 ggtaaagcag cgaaattcgc tatcaacctg aagaaagttg aagagcgtga actgccggaa
    62761 ctgactgcag aattcatcaa acgtttcggc gttgaagatg gttccgtaga aggtctgcgc
    62821 gctgaagtgc gtaaaaacat ggagcgcgag ctgaagagcg ccatccgtaa ccgcgttaag
    62881 tctcaggcga tcgaaggtct ggtaaaagct aacgacatcg acgtaccggc tgcgctgatc
    62941 gacagcgaaa tcgacgttct gcgtcgccag gctgcacagc gtttcggtgg caacgaaaaa
    63001 caagctctgg aactgccgcg cgaactgttc gaagaacagg ctaaacgccg cgtagttgtt
    63061 ggcctgctgc tgggcgaagt tatccgcacc aacgagctga aagctgacga agagcgcgtg
    63121 aaaggcctga tcgaagagat ggcttctgcg tacgaagatc cgaaagaagt tatcgagttc
    63181 tacagcaaaa acaaagaact gatggacaac atgcgcaatg ttgctctgga agaacaggct
    63241 gttgaagctg tactggcgaa agcgaaagtg actgaaaaag aaaccacttt caacgagctg
    63301 atgaaccagc aggcgtaatt tacgcagcat aacgcgctaa attcgcacaa aggcccgtca
    63361 ccgccaggtg gtgggctttt tttgtcatga attttgcatg gaaccgtgcg aaaagcctct
    63421 ttcggtgtta gcgtaacaac aaaagattgt tatgcttgaa atatggtgat gccgtaccca
    63481 taacacaggg actaactgat aatccgtcca taaggttaca atcggtacag caggtttttt
    63541 caattttatc caggagacgg aaatgtcata cagcggcgaa cgagataact ttgcacccca
    63601 tatggcgctg gtgccgatgg tcattgaaca gacctcacgc ggtgagcgct cttttgatat
    63661 ctattctcgt ctacttaagg aacgcgtcat ttttctgact ggccaggttg aagaccacat
    63721 ggctaacctg attgtggcgc agatgctgtt cctggaagcg gaaaacccag aaaaagatat
    63781 ctatctgtac attaactccc caggcggggt gatcactgcc gggatgtcta tctatgacac
    63841 catgcagttt atcaagcctg atgtcagcac catctgtatg ggccaggcgg cctcgatggg
    63901 cgctttcttg ctgaccgcag gggcaaaagg taaacgtttt tgcctgccga attcgcgcgt
    63961 gatgattcac caaccgttgg gcggctacca gggccaggcg accgatatcg aaattcatgc
    64021 ccgtgaaatt ctgaaagtta aagggcgcat gaatgaactt atggcgcttc atacgggtca
    64081 atcattagaa cagattgaac gtgataccga gcgcgatcgc ttcctttccg cccctgaagc
    64141 ggtggaatac ggtctggtcg attcgattct gacccatcgt aattgatgcc agaggcgcaa
    64201 ctgtgccgct atacttatcc agggcggcac aacgctgtaa gcggcttgcg cctgagaatg
    64261 gcatttgcgt cgtcgtgtgc ggcacaaaga acaaagaaga ggttttgacc catgacagat
    64321 aaacgcaaag atggctcagg caaattgctg tattgctctt tttgcggcaa aagccagcat
    64381 gaagtgcgca agctgattgc cggtccatcc gtgtatatct gcgacgaatg tgttgattta
    64441 tgtaacgaca tcattcgcga agagattaaa gaagttgcac cgcatcgtga acgcagtgcg
    64501 ctaccgacgc cgcatgaaat tcgcaaccac ctggacgatt acgttatcgg ccaggaacag
    64561 gcgaaaaaag tgctggcggt cgcggtatac aaccattaca aacgtctgcg caacggcgat
    64621 accagcaatg gtgtcgagtt gggcaaaagt aacattctgc tgatcggtcc gaccggttcc
    64681 ggtaaaacgc tgctggctga aacgctggcg cgcctgctgg atgttccgtt caccatggcc
    64741 gacgcgacta cactgaccga agccggttat gtgggtgaag acgttgaaaa catcattcag
    64801 aagctgttgc agaaatgcga ctacgatgtc cagaaagcac agcgtggtat tgtctacatc
    64861 gatgaaatcg acaagatttc tcgtaagtcg gacaacccgt ctattacccg tgacgtttcc
    64921 ggtgaaggcg tacagcaggc actgttgaaa ctgatcgaag gtactgttgc tgccgttcca
    64981 ccgcagggcg ggcgtaagca tccgcagcag gaatttttgc aggttgatac ctccaagatc
    65041 ctgtttattt gtggcggtgc gtttgccggt ctggataaag tgatttccca ccgtgtagaa
    65101 accggctccg gcattggttt tggcgcgacg gtaaaagcga agtccgacaa agcaagcgaa
    65161 ggcgagctgc tggcgcaggt tgaaccggaa gatctgatca agtttggtct tatccctgag
    65221 tttattggtc gtctgccggt tgtcgcaacg ttgaatgaac tgagcgaaga agctctgatt
    65281 cagatcctca aagagccgaa aaacgccctg accaagcagt atcaggcgct gtttaatctg
    65341 gaaggcgtgg atctggaatt ccgtgacgag gcgctggatg ctatcgctaa gaaagcgatg
    65401 gcgcgtaaaa ccggtgcccg tggcctgcgt tccatcgtag aagccgcact gctcgatacc
    65461 atgtacgatc tgccgtccat ggaagatgtc gaaaaagtgg ttatcgacga gtcggtaatt
    65521 gatggtcaaa gcaaaccgtt gctgatttat ggtaagccgg aagcgcaaca ggcatctggt
    65581 gaataattaa ccattcccat acaattagtt aaccaaaaag gggggatttt atctcccctt
    65641 taatttttcc tctattctcg gcgttgaatg tgggggaaac atccccatat actgacgtac
    65701 atgttaatag atggcgtgaa gcacagtcgt gtcatctgat tacctggcgg aaattaaact
    65761 aagagagagc tctatgaatc ctgagcgttc tgaacgcatt gaaatccccg tattgccgct
    65821 gcgcgatgtg gtggtttatc cgcacatggt cattccctta tttgtcgggc gggaaaaatc
    65881 tatccgttgt ctggaagcgg cgatggacca tgataaaaaa attatgctgg tcgcgcagaa
    65941 agaagcttca acggatgagc cgggtgtaaa cgatcttttc accgtcggga ccgtggcctc
    66001 tatattgcag atgctgaaac tgcctgacgg caccgtcaaa gtgctggtcg aggggttaca
    66061 gcgcgcgcgt atttctgcgc tctctgacaa tggcgaacac ttttctgcga aggcggagta
    66121 tctggagtcg ccgaccattg atgagcggga acaggaagtg ctggtgcgta ctgcaatcag
    66181 ccagttcgaa ggctacatca agctgaacaa aaaaatccca ccagaagtgc tgacgtcgct
    66241 gaatagcatc gacgatccgg cgcgtctggc ggataccatt gctgcacata tgccactgaa
    66301 actggctgac aaacagtccg ttctggagat gtccgacgtt aacgaacgtc tggaatatct
    66361 gatggcaatg atggaatcgg aaatcgatct gctgcaggtt gagaaacgca ttcgcaaccg
    66421 cgttaaaaag cagatggaga aatcccagcg tgagtactat ctgaacgagc aaatgaaagc
    66481 tattcagaaa gaactcggtg aaatggacga cgcgccggac gaaaacgaag ccctgaagcg
    66541 caaaatcgac gcggcgaaga tgccgaaaga ggcaaaagag aaagcggaag cagagttgca
    66601 gaagctgaaa atgatgtctc cgatgtcggc agaagcgacc gtagtgcgtg gttatatcga
    66661 ctggatggta caggtaccgt ggaatgcgcg cagcaaggtc aaaaaagacc tgcgtcaggc
    66721 gcaggaaatc cttgataccg accattatgg tctggagcgc gtgaaagatc gcatccttga
    66781 gtaccttgcg gttcaaagcc gtgtcaacaa aatcaaggga ccgatcctct gcctggtagg
    66841 gccgccgggg gtaggtaaaa cctctcttgg tcagtccatt gccaaagcca ccgggcgtaa
    66901 atatgtccgt atggcgctgg gcggcgtgcg tgatgaagcg gaaatccgtg gtcaccgccg
    66961 tacttacatc ggttctatgc cgggtaaact gatccagaaa atggcgaaag tgggcgtgaa
    67021 aaacccgctg ttcctgctcg atgagatcga caaaatgtct tctgacatgc gaggcgatcc
    67081 ggcctctgca ctgcttgaag tgctggatcc agagcagaac gtagcgttca gcgaccacta
    67141 cctggaagtg gattacgatc tcagcgacgt gatgtttgtc gcgacgtcga actccatgaa
    67201 cattccggca ccgctgctgg atcgtatgga agtgattcgc ctctccggtt ataccgaaga
    67261 tgaaaaactg aacatcgcca aacgtcacct gctgccgaag cagattgaac gtaatgcact
    67321 gaaaaaaggt gagctgaccg tcgacgatag cgccattatc ggcattattc gttactacac
    67381 ccgtgaggcg ggcgtgcgtg gtctggagcg tgaaatctcc aaactgtgcc gcaaagcggt
    67441 taagcagtta ctgctcgata agtcattaaa acatatcgaa attaacggcg ataacctgca
    67501 tgactacctc ggtgttcagc gtttcgacta tggtcgcgct gataacgaaa actgtgtcgg
    67561 tcaggtaacc ggtctggcgt ggacggaagt gggcggtgac ttgctgacca ttgaaaccgc
    67621 atgtgttccg ggtaaaggca aactgaccta taccggttcg ctcggcgaag tgatgcagga
    67681 gtctattcag gcggcgttaa cggtggttcg tgcgcgtgcg gaaaaactgg ggatcaaccc
    67741 tgatttttac gaaaaacgtg acatccacgt ccacgtaccg gaaggtgcga cgccgaaaga
    67801 tggtccgagt gccggtattg ctatgtgcac cgcgctggtt tcttgcctga ccggtaaccc
    67861 ggttcgtgcc gatgtggcaa tgaccggtga gatcactctg cgtggtcagg tactgccgat
    67921 cggtggtttg aaagaaaaac tcctggcagc gcatcgcggc gggattaaaa cagtgctaat
    67981 tccgttcgaa aataaacgcg atctggaaga gattcctgac aacgtaattg ccgatctgga
    68041 cattcatcct gtgaagcgca ttgaggaagt tctgactctg gcgctgcaaa atgaaccgtc
    68101 tggcatgcag gttgtgactg caaaatagtg acctcgcgca aaatgcacta ataaaaacag
    68161 ggctggcagg ctaattcggg cttgccagcc tttttttgtc tcgctaagtt agatggcgga
    68221 tcgggcttgc ccttattaag gggtgttgta aggggatggc tggcctgata taactgctgc
    68281 gcgttcgtac cttgaaggat tcaagtgcga tataaattat aaagaggaag agaagagtga
    68341 ataaatctca attgatcgac aagattgctg caggggctga tatctctaaa gctgcggctg
    68401 gccgtgcgtt agatgctatt attgcttccg taactgaatc tctgaaagaa ggggatgatg
    68461 tagcactggt aggttttggt acttttgccg ttaaagagcg tgctgcccgt actggccgca
    68521 acccgcagac cggtaaagag atcaccatcg ctgctgctaa agtaccgagc ttccgtgcag
    68581 gtaaagcact gaaagacgcg gtaaactaag cgttgtcccc ggtggggatg tgacgaagtt
    68641 caagggcgca tctactgatg tgcctttttt atttgtattc ggtgactttc tgcgtcttgt
    68701 gggctgacaa ttgcccccgt ttcttgtcac aataggcctt tgcgcgcatc gatacgttgc
    68761 gtgaggtaca cagtcatcta cagcggagtg ttgttacacc atgatggaca gcttacgcac
    68821 ggctgcaaac agtctcgtgc tcaagattat tttcggtatc attatcgtgt cgttcatatt
    68881 gaccggcgtg agtggttacc tgattggcgg aggcaataac tacgccgcaa aagtgaatga
    68941 ccaggaaatc agccgtgggc agttcgagaa cgcctttaac agcgagcgta atcgcatgca
    69001 gcaacagctg ggcgatcaat actccgagct ggcagcgaat gaaggctata tgaaaaccct
    69061 gcgtcaacag gtgctgaatc gtctgatcga cgaggcgctg ttggatcagt acgctcgtga
    69121 gctgaaactg ggtatcagtg atgagcaggt taaacaggcg attttcgcga ccccagcctt
    69181 ccaggttgac ggcaaatttg ataacagccg ctataacggt atcctcaacc agatggggat
    69241 gaccgccgat cagtacgccc aggcgctgcg taaccagctc actacccaac agctgattaa
    69301 cggtgttgcc ggtaccgatt ttatgctgaa aggtgaaacc gacgagctgg cggcactggt
    69361 cgcgcaacaa cgcgtggtgc gtgaggcgac tatcgatgtt aacgcgctgg cggcgaagca
    69421 gcctgtgacc gaacaggaga ttgccagcta ctacgaacaa aacaaaaaca atttcatgac
    69481 gccggaacaa ttccgcgtga gttacatcaa gctggatgcc gcaacgatgc agcaaccggt
    69541 tagcgatgcg gatatccaga gctactacga tcagcatcag gatcaattca cccagccgca
    69601 gcgtacccgc tacagcatca tccagaccaa aactgaagat gaagcgaaag cggtacttga
    69661 tgagctgaat aaaggcggtg attttgctgc attagccaaa gaaaaatctg ccgatattat
    69721 ctctgcccgt aacggcggcg atatgggttg gttagaagat gccactatcc ccgacgaact
    69781 gaaaaatgct ggtctgaaag aaaaaggcca actgtctggt gtcatcaaat cttcggtcgg
    69841 tttcctgatt gtacgtctgg acgacattca gccagcgaaa gtgaaatcgt tagacgaagt
    69901 acgtgacgac attgcggcga aagtgaaaca cgaaaaagcc ctcgatgcgt actatgcgct
    69961 gcagcagaaa gtgagcgatg cggcaagcaa cgacaccgag tctctggccg gtgcagagca
    70021 agctgccggc gttaaagcca ctcagacggg ttggttcagc aaagataacc tgccggaaga
    70081 gttgaacttc aagccggttg ccgacgctat ctttaacggc ggtctggtag gtgaaaacgg
    70141 cgcgccgggc atcaactctg acatcatcac cgtagacggc gaccgtgcat tcgtgctgcg
    70201 catcagcgag cacaaaccgg aagcggtgaa accgttggca gatgttcagg aacaagttaa
    70261 ggcactggtt cagcacaaca aagctgaaca acaggcgaaa gtggatgctg agaaactgct
    70321 ggttgatttg aaagccggca aaggtgcgga agctatgcag gctgccggtc tgaaatttgg
    70381 cgagccgaaa accttaagcc gttccggtcg tgacccgatt agccaggcgg cgtttgcact
    70441 gccactgcca gcgaaagaca aaccgagcta cggtatggcg accgatatgc aaggtaatgt
    70501 ggttctgctg gcgctggatg aagtgaaaca aggttcaatg ccggaagatc agaaaaaagc
    70561 gatggtgcag ggtatcaccc agaacaacgc acaaatcgtc tttgaagctc tgatgagtaa
    70621 cctgcgtaaa gaggcgaaaa tcaaaattgg cgatgcgctg gaacagcaat aatcctgaag
    70681 ccgcctcgca aaaaaatgcg ttgcagctgt aacaagaaaa ggtcgctttc gcggcctttt
    70741 ccatttctga acattgccat ttgtttactg ttttcactgc cgttaaggtg attccactgt
    70801 taacaaacaa ggagaaaaca gtatgaaaca cggaattaaa gcactgctca ttaccctgtc
    70861 cctggcctgt gccggaatgt ctcatagcgc gctggcggca gcttctgtgg cgaaaccgac
    70921 ggcggtagaa accaaagcgg aagctcctgc agcacaaagt aaagcagcag taccggcgaa
    70981 agccagtgac gaagaaggca cccgggtcag cattaataat gccagcgcgg aagagctagc
    71041 ccgcgcgatg aatggcgttg gcctgaagaa agcgcaggcg attgtcagtt atcgcgaaga
    71101 gtacggtccg tttaaaacag tggaggatct aaagcaggtg ccggggatgg gcaattcgct
    71161 ggtggaacgt aatctggcgg tattaaccct gtaattaatt tgcatagtgg caattttttg
    71221 ccagactgaa gaggtcatac cagttatgac ctctgtactt ataacaacaa cgtaaggtta
    71281 ttgcgctatg caaacacaaa taaaagttcg tggatatcat ctcgacgttt accagcacgt
    71341 caacaacgcc cgctaccttg aatttctcga agaagcccgc tgggatgggt tggaaaatag
    71401 cgacagtttt cagtggatga cggcccataa catcgccttc gtcgtggtca atatcaatat
    71461 taactatcgt cgcccagcgg tattaagtga cctgttaact attaccagtc agttgcagca
    71521 attaaacggt aaaagcggca tcttaagcca ggtcattaca ctggagccgg aagggcaggt
    71581 ggtagcggat gcgcttatta cgtttgtttg tattgatctt aaaacgcaga aagcattagc
    71641 tctggaaggg gaattgcgcg aaaagctgga gcagatggtt aagtaaacgt tttgtggtgc
    71701 cggatgctca agccgcatcc ggcgacaccc ggaataatta cctcaacccg gttttctgct
    71761 tcatcgctgc catcaccgtc ggtttatcgg ccagataatg attcaaaccg ttggcgcgta
    71821 aattacatgc cgcacaatga ccgcaaccgt cgcctttaat gccgttatag caggtcaacg
    71881 tttcgttacg gactaaatcc agtttgccgt aataatctgc cagcgcccag gtttccgctt
    71941 tatcaatcca catcagcggc gtttcaaaac gaatatcttt cgccatgccc aaactgacgg
    72001 catggtttag tgctttcaca aactcatcgc ggcaatccgg gtagccggag aaatccgttt
    72061 cacagacgcc ggtaattacg gcttctgctt ttacctgata cgcatatatt gccgccagcg
    72121 tcaggaacaa aatattacgc cctgggacaa acgtattcgg gatgccatcg gcttcaggtt
    72181 cataatcagg caccggaatg ctgtcacgtg tcaggctgct gaccgccagc tcgttgagca
    72241 gcgttacatc aagaacctta tgcgcgcgtg ctcccagttt cagcgccagt tcgcgtgcca
    72301 cgtcgatttc tgcgcgatgt cgctgaccgt aatcgaacgt cacgcaatgg acttcatcat
    72361 attgttgtaa tgcctgcacc agacaggtgg tggaatcctg gcctccactg aacacaacga
    72421 cagcacgttt catagataat cctgcttgaa caataaaagc gttatggtaa cgcctgcgat
    72481 taacccggac cagctattca ttgcgacggc gcgggaagcc aggcttcggt aaattcaaac
    72541 cagccgcgcg gtgtcagtcg cacaccgttc acgccgggag gggcactaat gcgatagtga
    72601 tagttgaaca gcggcgtcag cgtcgcgtct gccattaact ggctaaaaac cgctttcagg
    72661 gcattaaatc ggttttcctc atcaggcatt acttgcaccg cgtccagcgt cgattgcaga
    72721 tgtgcatatg ctggagcgtc gaaaacatgt ggccatagtg gatcgcaacg tagccattgc
    72781 tccagagtat attccggtgc ttcgccaatt aatctgtcgc ccatcatgag gtctgcgtgt
    72841 gccagtaggg tcgtgtcgtc ccagtttttt gcgttatgaa aaataattgt gagttcacag
    72901 ccttccgctg ccagtgtcgc ctgtaggcgt tctgccatgg tatgaagttc tatcggtagg
    72961 tgataaacca gcgtcaaggt tttcggtagt ttgacttcat ccggtacttg ccagtgcgga
    73021 atagtccagc ctggcagtaa tgcatgactg gcggtgatca ggttttctcc gacttctaac
    73081 gtttgtaata aaccggattg atgaataatg gagatcactt ttcgcgcctg ccagagggag
    73141 agtcggggac ttttgcgcaa caaaacctaa actgatgcca ctactgacct ggctgacccg
    73201 ttgcagctcc tccggtttgc cgatggtgat ttgcacggga tgccgacaac tggttcccaa
    73261 atctttttcg aaaagcggcg gagttatcca gtactcaacc gctttaagca gcggatgacg
    73321 caaatggtaa taatcatggc tctccaggcg caccagctcc gctgtgaatt gtgttaagcg
    73381 aaaaggacca gtgccgatca gtgggaattg cggatgcgcc agatggctgc aatagctcgc
    73441 cagccggtgc gcaagccagt aatcggggcg atgtaaaaag aaggtcagac actgcggatg
    73501 ggtgacttca atacgcttca cgctaataaa taattgatcc agtgctggca gttgtaacag
    73561 catcaataat cgctggtgta agtgtgaggc ttttactgca tcgccgttat gccagtgtag
    73621 ggttgaacga agataaaagt cccagcgtaa cccgtcagta gaggtttccc agtgatgcgc
    73681 taaatcgcca atcgggcgct gagtattatt atcgaagcgg gtcaggccgg aaaatatctg
    73741 cccggcgaga tgctgctcgg cacggccggg caaaaagcct ggttgtagcg gttcgagcgg
    73801 gcgatagtag ggaatacgca acgtgggtgt atcgttttgc cattgtccgc ccataaacgg
    73861 ctgtaacaga gtgcgtagct cacctagggc cagttgcgcc agctccagca catcttgctg
    73921 ctttccggtt tccagtgcct gttccatcat cgcattgcgt agcgattccg gcgtgaccag
    73981 aaagcgtaat tgtccgcgct ttccgcgtcc tgactgcgcc tgccactcca gccatcccgc
    74041 ctcctgtgcc tgacgcaaca gcgtacgaac atggcgttcg ctgcaaaaac agcgttcggc
    74101 cagttcgctg acggtgacgg tttgcggctt tccggctgaa ggttgccaca gacgttgata
    74161 ctggttaaga cggttgagca atcgcatata aacccggaac aatattattt aactattcac
    74221 tattacttcc gtatatatca ggtgatactc aatctccatt aaccgtgtca cagagtggag
    74281 aaagaaatgg ctcgtctggc agcatttgat atggatggca ctttattgat gcctgaccat
    74341 catttaggtg agaaaaccct ctctactttg gcgcgactgc gtgaacgcga cattaccctc
    74401 acttttgcca cggggcgtca tgcgctggag atgcagcata ttctcggggc gctatcgctg
    74461 gatgcatatt tgattaccgg caacggaacg cgcgtgcatt ctctggaagg tgaactttta
    74521 catcgtgatg atttacctgc ggatgtcgcg gagctggtgc tgtatcagca atgggatacc
    74581 cgagccagca tgcatatctt caatgacgac ggttggttta ccgggaaaga gatccctgcg
    74641 ttgttgcagg catttgtcta tagcggtttt cgttatcaga taatcgatgt caaaaaaatg
    74701 ccactcggca gcgtcaccaa gatctgcttc tgtggcgatc acgacgatct tacacgcttg
    74761 cagatccagc tatacgaagc attaggcgag cgtgcacatt tgtgtttttc cgccacggat
    74821 tgcctcgaag tgctgccggt gggctgcaat aaaggcgctg cattgacggt gctgacccaa
    74881 catctaggtt tatcgttgcg cgattgcatg gcctttggtg atgcgatgaa cgatcgcgaa
    74941 atgttaggca gcgtcggtag cgggtttatt atgggcaatg cgatgccgca actgcgcgcg
    75001 gagctcccgc atttaccggt gattggacat tgccgaaatt aggctgtctc tcactatttg
    75061 acgcactgac tggactatcc acatctacct tattcccccg aataatgaga tcccttccag
    75121 caccgggcaa ttgcccggtt ttttttgcgt tgaatttgtc attttgtgcc gtggtgttta
    75181 aaccgcacag aataaattgt cgtgatttca cctttaaaat agaattaaaa gagaaaaaaa
    75241 ttctctgtgg aagggctatg ttagataaaa ttgaccgtaa gctgctggcc ttactgcagc
    75301 aggattgcac cctctctttg caggcactgg ctgaagccgt taatctgaca accacccctt
    75361 gctggaagcg cctgaaacgg ctggaggacg acggtatcct tatcggcaaa gtcgccctgc
    75421 tggatccgga aaaaataggc ctcggcctga ccgcctttgt gctgataaaa acgcaacatc
    75481 acagtagcga atggtattgc cgctttgtca cggtggttac cgaaatgcca gaagtgctgg
    75541 ggttctggcg catggctggt gaatacgatt atctgatgcg cgtccaggtt gccgacatga
    75601 aacgctacga cgagttttat aagcgtctgg taaacagcgt gccggggctg tcggacgtca
    75661 cttccagctt cgcgatggaa cagattaaat acaccacttc tttacccatc gaataaatat
    75721 ccagaatcag gtcaggacac aacgcgtgcg attatttgct caattaagct ggtatttccg
    75781 tcgggaatgg cgtcgctatc tcggggctgt cgccttgctt gtcattatcg cgatgctgca
    75841 actggttccg ccaaaagtgg ttggtattgt tgtcgatggc gtgacagaac aacactttac
    75901 taccgggcag atcctgatgt ggatcgccac catggtgctg attgccgttg tggtttattt
    75961 cctgcgttac gtctggcggg tattgctgtt tggtgcgtct tatcaactgg ctgttgaact
    76021 gcgtgaagat tattaccgtc agctaagccg gcagcatcct gagttttacc tgcgtcatcg
    76081 cacgggtgac ctcatggctc gtgcgaccaa tgacgtcgat cgcgtcgtgt ttgcagccgg
    76141 agaaggggtg ctgacgctgg tggattcact ggtgatgggc tgcgctgtgt tgattatgat
    76201 gtctacgcaa attagctggc agttgacctt atttgccctg ttgccgatgc cagtgatggc
    76261 gatcatgatc aagcgcaacg gcgatgcctt gcatgaacgc tttaagctgg cacaggcggc
    76321 gttttctagt cttaatgacc gcacccagga aagcctcacc agtatccgca tgatcaaagc
    76381 ctttggtctg gaagatcgcc agtcggcgtt atttgccgcg gatgccgaag ataccggcaa
    76441 aaaaaacatg cgggtggcgc gtattgatgc tcgtttcgac ccgaccatct atatcgcgat
    76501 tggtatggcg aatttgctgg cgattggcgg cggtagttgg atggtggtgc agggcagttt
    76561 aacgctgggc cagctcacca gttttatgat gtatttaggt ctgatgattt ggccaatgct
    76621 ggcgctggca tggatgttta acattgtgga acgtggtagt gctgcataca gccgtattcg
    76681 cgcgatgctg gcggaagcgc cggtggtgaa cgatggtagc gaacccgtgc cggaagggcg
    76741 tggcgaactg gatgtaaata ttcaccagtt cacgtatccg cagactgacc atcctgcgct
    76801 ggaaaacgtc aatttcgccc tgaaacccgg tcagatgctg ggtatctgcg ggccgactgg
    76861 ttccggcaaa agtaccctgt tgtcgctcat tcagcgtcat ttcgacgtca gcgaggggga
    76921 tattcgcttt catgatattc ctctgacgaa gttacaactc gatagctggc gtagccgcct
    76981 ggcggtagtt agccagacac cgttcctttt ttccgacacc gtagcgaaca acatcgcgtt
    77041 gggttgcccg aatgccaccc agcaagagat tgagcatgtc gcgcggttag ccagcgtaca
    77101 tgacgatatt ttgcgtctac cgcaaggtta cgatacagaa gtgggcgagc gcggcgtgat
    77161 gctttccggt gggcaaaaac agcgtatctc cattgctcga gcgttattag tcaacgcgga
    77221 aatcctcatc cttgatgatg cgctttcggc ggtggacgga cgcacagagc accagatcct
    77281 gcataacctg cgtcagtggg gacagggaag aacggtaatc atcagtgccc atcgcctttc
    77341 ggcactgacg gaagccagtg aaaatattgt gatgcagcac ggacatatcg cccagcgtgg
    77401 caatcatgat gagctggcgc aacaaagcgg ctggtatcgc gatatgtatc gctatcaaca
    77461 actggaggcg gcgctcgacg acgctccgga aattcgcgag gaggccgtcg atgcgtagtt
    77521 ttagccaact gtggccgact ctcaagcgtc tgttagcgta cggttcgccg tggcgtaaac
    77581 cgctggggat tgcggtcctg atgatgtggg ttgcggcagc ggcagaagtc agtgggccgc
    77641 tgcttatcag ctattttatc gacaatatgg tagcgaaaaa taacctgccg ttgaaaatgg
    77701 ttgcagggct ggctgcggcg tatgttgggc tacaactgtt tgccgccggg ctacattacg
    77761 cgcagtcgct gctgtttaat cgggcggcag taggcgtagt gcaacagttg cgtaccgacg
    77821 tgatggatgc cgcattgcgc cagccattaa gcgagtttga tacccaaccc gtcgggcagg
    77881 tgatttcccg cgtcactaat gacactgaag tgatccgcga tctctacgtt accgtagtgg
    77941 caactgtcct gcgtagcgcc gcactggtgg gcgcgatgct ggtggcgatg ttcagcctcg
    78001 actggcgaat ggcgctggtg gcgataatga ttttcccggt ggtgctggtg gtaatggtga
    78061 tataccagcg ttacagcacg ccgattgtcc gtcgtgtgcg cgcctatctg gcggatatca
    78121 acgacggctt taacgaaatc atcaatggca tgagcgttat ccagcagttc cgtcagcagg
    78181 cgcgatttgg cgaacgtatg ggggaggcca gtcgttcaca ctatatggcc aggatgcaaa
    78241 ccctgcgcct cgacggtttt ctgctgcgtc cgctgctgag tctgttttca tcgctcattc
    78301 tttgtggctt gttgatgctg tttggcttct ccgctagcgg caccattgaa gtaggcgtgc
    78361 tgtatgcgtt tatcagctat cttgggcgac ttaacgaacc cttaatcgaa ctgaccacgc
    78421 aacaggcgat gctgcaacag gctgttgttg ctggtgagcg cgtgtttgaa ctgatggacg
    78481 gaccgcgcca gcaatatggc aatgatgatc gcccgttaca gagtggcacc atcgaagtcg
    78541 ataacgtgtc atttgcttat cgcgatgaca atctggtgct aaagaacatt aatctctctg
    78601 tgccttcgcg taactttgtg gcactggtcg ggcataccgg cagtggcaaa agcaccctcg
    78661 ccagtttatt gatgggctat tacccgctaa cggaaggtga gattcgcctt gatggtcgtc
    78721 cattaagttc gctaagtcac agcgcgctgc gccagggcgt ggcaatggtg cagcaagatc
    78781 cggtggtgct ggcggatacc ttcctcgcca acgtgacgct ggggcgtgat atctccgaag
    78841 aacgcgtctg gcaggcgctg gaaaccgtgc aactggcgga gctggcgcgc agcatgagtg
    78901 atggtattta tacgccgctg ggcgagcagg ggaataatct ctccgtcggg caaaagcaac
    78961 tgctggcact ggcacgcgtg ttggtggaga cgccgcaaat cctgatcctt gatgaggcaa
    79021 ccgccagcat tgactccggt actgaacagg cgattcaaca tgctctggcg gctgtgcgtg
    79081 aacataccac gctggtggtg attgctcacc gcttatcgac cattgttgat gccgacacca
    79141 ttctggtgct tcatcgtggg caagccgtgg agcagggcac tcaccagcaa ctgctggcgg
    79201 cccagggacg ctactggcag atgtatcaac tgcaacttgc gggcgaagag ctggcagcca
    79261 gcgtgcgtga agaagaatca ttgagcgcct gaatagcgca atatttcatc gttggtgcaa
    79321 aaatgtaacg cactgtgcac tgtcatagtg cgttttcatt ttcaatcttc ttaacttcct
    79381 gctctctttc tcgtttttca tttctggcac accgcttgca ataccttctt cgtgtagcag
    79441 aaccattacc gaattctgac tggaggggat ctatgaagct ggtgaccgtg ataatcaaac
    79501 cattcaagct ggaagacgtt cgtgaagcgt tatcttccat tggtattcag ggcctgaccg
    79561 tcaccgaagt gaaaggtttc gggcgtcaga aagggcatgc cgagctgtac cggggggcgg
    79621 aatacagcgt caacttcctg ccaaaagtaa aaattgatgt ggcaattgct gatgaccaac
    79681 tcgatgaagt gatcgatatc gtcagtaagg cggcttacac cggaaaaatt ggcgacggca
    79741 aaatcttcgt cgctgaattg caacgcgtca ttcgtattcg taccggcgaa gccgacgaag
    79801 cggcgctgta atctctggca cacagcaaca ggaacgaaaa atgaagatag cgacgataaa
    79861 aactgggctt gcttcactgg cgatgctgcc gggactggta atggctgcac ctgcggtggc
    79921 cgataaagcc gacaatgcgt ttatgatgat ttgtactgcg ctggtgctgt ttatgactat
    79981 tccggggatt gccctgtttt acggtgggtt gattcgcggc aaaaacgtgc tgtcgatgct
    80041 gatgcaggtg acggtgacgt ttgcactggt ctgtattctc tgggtggttt acggttactc
    80101 gctggcgttt ggtgagggta acaacttctt cggcaacgtt aactggttga tgctgaaaaa
    80161 catcgaactg acggcggtga tgggcagcat ttatcagtat atccacgtag cgtttcaggg
    80221 atcgtttgcc tgcattaccg taggcttgat agttggggcg ctggcggaac gaatccgctt
    80281 ctcagctgtg ttgattttcg tggtggtatg gctgacgctc tcttacattc cgattgcgca
    80341 tatggtgtgg ggcggcggtt tgctggcttc tcacggtgca ctggatttcg cgggtggcac
    80401 agtggtgcac attaacgccg caatcgccgg tctggtgggc gcgtatctga taggcaaacg
    80461 cgtgggcttc ggtaaagagg cgtttaaacc gcacaacctg ccgatggtct tcaccgggac
    80521 tgccattctc tatatcggtt ggtttggctt taacgccggg tcagcgggca cggcgaatga
    80581 aatcgcggca ctggcatttg tgaatactgt ggtcgcaacg gcggcggcaa ttcttggctg
    80641 gatcttcggt gaatgggcgc tgcgtggtaa gccttcactg ctgggggcgt gttctggcgc
    80701 gattgccggt ctggtcggcg tgacgccagc gtgcggctac attggggttg gcggcgcgtt
    80761 gattatcggc gtggtagctg gtctggcggg cttgtggggc gttaccatgc tcaaacgctt
    80821 gctgcgggtg gatgatccct gcgatgtctt cggtgtgcac ggcgtttgtg gcattgtcgg
    80881 ctgtatcatg accgggattt ttgccgccag ctcgctgggc ggcgtgggct tcgctgaagg
    80941 tgtgacgatg ggtcatcagt tgctggtaca gctggaaagc atcgccatta cgatcgtctg
    81001 gtccggtgtg gtggcattta ttggctacaa attggcggat ctgacggttg gtctgcgtgt
    81061 accggaagag caggagctag aagggctgga tgtcaacagt cacggcgaga atgcctataa
    81121 cgcgtaacaa gcactgcaaa aaacagccgg acggttttca cctccggcta tttttttaat
    81181 tgtgattacg catcacccct tcctgaacgg tcgaggcaac cagtacgccg tcctgggtat
    81241 aaaactcacc gcgcacaaag ccacgtgcgc tggacgccga ggtgctctcc acgctataca
    81301 gcagccattc attcaaatta aacgggcgat ggaaccacat ggaatggtca atggtggcaa
    81361 tctgaatccc cggttcgaga aaaccgatgc cgtgcggctg tagagctacc ggcaggaagt
    81421 taagatcaga agcgtaaccg agcagatact gatgaacgcg caggtcatcc ggcacgctac
    81481 catttgcgcg gatccacacc tgacgatgtg gttctgcgac gtgacctttc agtgggttat
    81541 gaaactccac cggacggact tccagcggac gatcgcagat gaatttatct ttaagcactg
    81601 gcggcagcag gtgcgccagc gattgggcga tttgcgtttc cgaaggcagg ccatcaggcg
    81661 ctggcgcgga cggcattgtt ttttgatgtt cgaaacccgc ttctggtgcc tggaaagagg
    81721 ccgtcatata aaaaatcggt ttgccgtttt gaatagcagc aacccggcgg gcgctgaagc
    81781 tgttaccatc acgcagcgtt tcgacatcat aaataatcgg tttcttacta tcgcctgggc
    81841 gaagaaagta gctgtgaaac gaatgtacca gccgctcttc cgggacggtc tcttttgcag
    81901 catacaaggc ctgacccacg acctggccgc caaacacctg gcgtaaacct aaatcttcac
    81961 tctggccgcg aaagagtcct gcctcaattt tttccagatt taacaatgcc agtaaatttt
    82021 ttagcgcctg actcatataa ctctccagta acaaagctgc cgcagcaagc caaagtgagt
    82081 tgagtataac gcaaatttgc cactggtccg atgggtgcaa taatctgaat tacgggctaa
    82141 ttacaggcag aaatgcgtga tgtgtgccac acttattgac gttactattt tgttaaccac
    82201 tcttccggcg aggaaagtta gcccgctggt gcattgataa taaggagaaa tgaatgaaac
    82261 tcgtgcacat ggccagtggt ttagcggttg cgattgcgtt ggcggcttgc gcagataaaa
    82321 gcgcggatat tcagacgcca gccccggctg caaatacgtc tatttcagca acacaacaac
    82381 ctgctatcca gcaaccgaat gtctccggta ccgtctggat ccggcagaaa gtcgcactgc
    82441 cgcctgatgc tgtgctgacc gtgacacttt ctgacgcgtc gttagccgat gcaccgtcaa
    82501 aagtgctggc gcagaaagcg gtgcgtaccg aaggtaaaca gtcaccattc agctttgttc
    82561 tgccatttaa cccggcagat gttcagccga acgcgcgtat tctgttgagt gcggcgatta
    82621 ccgtgaatga caaactggta tttattaccg ataccgttca gccggtgatc aacaagggcg
    82681 gaactaaagc cgacctgaca ttggtgccgg tgcagcaaac cgccgtgccg gttcaggcca
    82741 gcggtggtgc aacgactacc gtaccttcga cttcaccaac tcaggtgaat ccgtcttcgg
    82801 cagttccagc tcctacgcaa tattaagcga cgttaaccct ctccgcc
//
LOCUS       DADKRT010000002        66892 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.002, whole genome shotgun sequence.
ACCESSION   DADKRT010000002 DADKRT010000000
VERSION     DADKRT010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 66892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66892
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.002"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..1556
                     /gene="cas3"
                     /locus_tag="JQ356_000082"
                     /pseudo
     CDS             1..1556
                     /gene="cas3"
                     /locus_tag="JQ356_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142534.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="CRISPR-associated helicase Cas3'"
     gene            1654..3216
                     /gene="casA"
                     /locus_tag="JQ356_000083"
     CDS             1654..3216
                     /gene="casA"
                     /locus_tag="JQ356_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse1/CasA"
                     /protein_id="HAY4620293.1"
                     /translation="MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADL
                     QGAAWQFLLGLLQTSFAPKDQRSWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFM
                     QDFDELKVKATFIASLLPDAPGKQTKERNTDHFIKRDTTQHLCLHCVPLALFSIQLNA
                     PIGGRGYYPGLRGGGPLTTLIELLEYQGNQQTPLWRKLWLNVMPQDEADLPLPKTFDD
                     LVFPWLAPTRTSELDGAVVTDEQVNKLQAYWGMPRRIRIDFKTTSIGNCDICGRQSDA
                     LLGLMSLKNYGVQYVMWRHPLTPYRLPLKEGGDFYSVKPQPGGLIWRDWLGLIEVGNS
                     KNNTELPAQVVKLLNASNLKQTRVGLWGFGFDFEDMKVRCWYEHHFPLLLNKKEDLIP
                     KLRLAAQAASHILSLLHRALKEAWFSEKKTTKLDFGFVDIDFWNKTQHRFLRLVRKIE
                     EGQDPDELLSKWQKEMWLFARQDFDDRVFTNPYEPVDLERVMTARKKYFTTSAEKQNA
                     NAAREKKQEAAE"
     gene            3213..3802
                     /gene="casB"
                     /locus_tag="JQ356_000084"
                     /pseudo
     CDS             3213..3802
                     /gene="casB"
                     /locus_tag="JQ356_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311640.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse2/CasB"
     gene            3817..4895
                     /gene="cas7e"
                     /locus_tag="JQ356_000085"
                     /pseudo
     CDS             3817..4895
                     /gene="cas7e"
                     /locus_tag="JQ356_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311639.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas7/Cse4/CasC"
     gene            4906..5652
                     /gene="cas5e"
                     /locus_tag="JQ356_000086"
     CDS             4906..5652
                     /gene="cas5e"
                     /locus_tag="JQ356_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HAY4620294.1"
                     /translation="MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGV
                     GIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPE
                     LLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
                     APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDV
                     PLNRQQWLFGERTVNQGPWLSKEEPCTSQE"
     gene            5634..6284
                     /gene="cas6e"
                     /locus_tag="JQ356_000087"
     CDS             5634..6284
                     /gene="cas6e"
                     /locus_tag="JQ356_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HAY4620295.1"
                     /translation="MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPSGKERQ
                     FLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKA
                     GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDISVDAYRQQQ
                     LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
     gene            6281..7201
                     /gene="cas1e"
                     /locus_tag="JQ356_000088"
     CDS             6281..7201
                     /gene="cas1e"
                     /locus_tag="JQ356_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
                     /protein_id="HAY4620296.1"
                     /translation="MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHI
                     PVGSVACIMLEPGTRVSHAAVHLAATVGTLQVWVGEAGVRVYSSGQPGGARADKLLYQ
                     AKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
                     NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYD
                     IADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGE
                     IEPPQPAPDMLPPAIPEPETLGDSGHRGRG"
     gene            7201..7494
                     /gene="cas2"
                     /locus_tag="JQ356_000089"
     CDS             7201..7494
                     /gene="cas2"
                     /locus_tag="JQ356_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HAY4620297.1"
                     /translation="MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
                     QQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
     gene            complement(7701..8738)
                     /gene="iap"
                     /locus_tag="JQ356_000090"
     CDS             complement(7701..8738)
                     /gene="iap"
                     /locus_tag="JQ356_000090"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase isozyme conversion
                     aminopeptidase"
                     /protein_id="HAY4620298.1"
                     /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
                     PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA
                     AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
                     TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
                     KTTEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
                     EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
                     LPLVKELAKAS"
     gene            8990..9898
                     /gene="cysD"
                     /locus_tag="JQ356_000091"
     CDS             8990..9898
                     /gene="cysD"
                     /locus_tag="JQ356_000091"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HAY4620299.1"
                     /translation="MAQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
                     FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
                     TSERQGRVIDRDQAGSMELKKRQGYF"
     gene            9900..11327
                     /gene="cysN"
                     /locus_tag="JQ356_000092"
     CDS             9900..11327
                     /gene="cysN"
                     /locus_tag="JQ356_000092"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HAY4620300.1"
                     /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYSEETFTHIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
                     SMSWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
                     RVKALPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
                     PSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYPVDINNLTQREVENLPLNG
                     IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSA
                     FELELNALVRRHFPHWGARDLLGDK"
     gene            11327..11932
                     /gene="cysC"
                     /locus_tag="JQ356_000093"
     CDS             11327..11932
                     /gene="cysC"
                     /locus_tag="JQ356_000093"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HAY4620301.1"
                     /translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
                     AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
                     VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
                     GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
     gene            11982..12305
                     /locus_tag="JQ356_000094"
     CDS             11982..12305
                     /locus_tag="JQ356_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HAY4620302.1"
                     /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
                     IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
                     MWLLG"
     gene            12499..12810
                     /gene="ftsB"
                     /locus_tag="JQ356_000095"
     CDS             12499..12810
                     /gene="ftsB"
                     /locus_tag="JQ356_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HAY4620303.1"
                     /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
                     KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
                     R"
     gene            12829..13539
                     /gene="ispD"
                     /locus_tag="JQ356_000096"
     CDS             12829..13539
                     /gene="ispD"
                     /locus_tag="JQ356_000096"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HAY4620304.1"
                     /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
                     LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV
                     LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQENT"
     gene            13539..14018
                     /gene="ispF"
                     /locus_tag="JQ356_000097"
     CDS             13539..14018
                     /gene="ispF"
                     /locus_tag="JQ356_000097"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HAY4620305.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
     gene            14015..15064
                     /gene="truD"
                     /locus_tag="JQ356_000098"
     CDS             14015..15064
                     /gene="truD"
                     /locus_tag="JQ356_000098"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HAY4620306.1"
                     /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
                     LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
                     AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
                     GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
                     VVDGDALQLAGRGSWFVATTEELAELQHRVNDKELMITAALPGSGEWGTQRKALAFEQ
                     AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
                     RELINTTGDYAHIAE"
     gene            15045..15806
                     /gene="surE"
                     /locus_tag="JQ356_000099"
     CDS             15045..15806
                     /gene="surE"
                     /locus_tag="JQ356_000099"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HAY4620307.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
                     PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
                     EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
     gene            15800..16426
                     /gene="pcm"
                     /locus_tag="JQ356_000100"
     CDS             15800..16426
                     /gene="pcm"
                     /locus_tag="JQ356_000100"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HAY4620308.1"
                     /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
                     WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
                     VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
                     QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            16566..17657
                     /gene="nlpD"
                     /locus_tag="JQ356_000101"
     CDS             16566..17657
                     /gene="nlpD"
                     /locus_tag="JQ356_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HAY4620309.1"
                     /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
                     ANTNSGMLITPPPKMGTTSTAQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSY
                     SGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGG
                     NAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPAATTVTA
                     PVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAI
                     IATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMG
                     STGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            17720..18712
                     /gene="rpoS"
                     /locus_tag="JQ356_000102"
     CDS             17720..18712
                     /gene="rpoS"
                     /locus_tag="JQ356_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HAY4620310.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(18806..20170)
                     /locus_tag="JQ356_000103"
     CDS             complement(18806..20170)
                     /locus_tag="JQ356_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family transporter"
                     /protein_id="HAY4620311.1"
                     /translation="MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
                     IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
                     AALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
                     HPGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLA
                     PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGS
                     PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES
                     GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
                     VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
                     WAVI"
     gene            complement(20259..21034)
                     /locus_tag="JQ356_000104"
                     /pseudo
     CDS             complement(20259..21034)
                     /locus_tag="JQ356_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417219.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
     gene            complement(21039..21677)
                     /locus_tag="JQ356_000105"
     CDS             complement(21039..21677)
                     /locus_tag="JQ356_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HAY4620312.1"
                     /translation="MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNL
                     LATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHST
                     WSTVLSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAF
                     LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS"
     gene            complement(21674..22936)
                     /locus_tag="JQ356_000106"
     CDS             complement(21674..22936)
                     /locus_tag="JQ356_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HAY4620313.1"
                     /translation="MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAID
                     ALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDAL
                     MDALDTPFTVFSPALSVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEA
                     QSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPL
                     VTGGSGLAIGLARQWAQENGNQAREAGHPLAGRGVVLSGSCSQMTNRQVAHYRQIAPA
                     REVDVARCLSTETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKAS
                     QAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPGVPWVNAL
                     DKPVSLALKSGNFGDEAFFSRAQREFLS"
     gene            complement(22933..23841)
                     /locus_tag="JQ356_000107"
     CDS             complement(22933..23841)
                     /locus_tag="JQ356_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY4620314.1"
                     /translation="MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACAT
                     LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
                     IASADAQEIATALAGFDLEMLDAPVSGDAVKAANGEMTVMASGSDIAFERLAPVLEAV
                     AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
                     NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
                     NAGYGKEDDSAVIKIFSGITLPGAKS"
     gene            24007..24804
                     /locus_tag="JQ356_000108"
     CDS             24007..24804
                     /locus_tag="JQ356_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY4620315.1"
                     /translation="MSAGQRKEQKLIPVERRQIILEMVAEKGIVSIAELTDRMNVSHM
                     TIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQP
                     GSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENR
                     SCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDA
                     TKYGQVATWLALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
     gene            complement(24855..25511)
                     /gene="pphB"
                     /locus_tag="JQ356_000109"
     CDS             complement(24855..25511)
                     /gene="pphB"
                     /locus_tag="JQ356_000109"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HAY4620316.1"
                     /translation="MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETD
                     LLISVGDNIDRGPESLDVLRLLNQPWFISVKGNHEAMELDAFATGDGNMWLASGGDWF
                     FDLNDSEQQEAIDLLLKFHHLPHIIEITNDIIKYVIAHADYPGDEYLFGKEIAESELL
                     WPVYRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIR
                     "
     gene            complement(25617..28178)
                     /gene="mutS"
                     /locus_tag="JQ356_000110"
     CDS             complement(25617..28178)
                     /gene="mutS"
                     /locus_tag="JQ356_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HAY4620317.1"
                     /translation="MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDA
                     KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
                     KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
                     ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
                     TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
                     LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
                     TAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
                     LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
                     EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
                     YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
                     YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
                     RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
                     NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
                     DVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
                     ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
     gene            28254..28388
                     /locus_tag="JQ356_000111"
     CDS             28254..28388
                     /locus_tag="JQ356_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620318.1"
                     /translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIASVE
                     "
     gene            28465..28818
                     /locus_tag="JQ356_000112"
     CDS             28465..28818
                     /locus_tag="JQ356_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HAY4620319.1"
                     /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
                     VPELPEKYRPKKPRE"
     gene            complement(28855..30933)
                     /gene="flhA"
                     /locus_tag="JQ356_000113"
                     /pseudo
     CDS             complement(28855..30933)
                     /gene="flhA"
                     /locus_tag="JQ356_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311614.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
     gene            complement(31007..32017)
                     /gene="hypE"
                     /locus_tag="JQ356_000114"
     CDS             complement(31007..32017)
                     /gene="hypE"
                     /locus_tag="JQ356_000114"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation carbamoyl dehydratase
                     HypE"
                     /protein_id="HAY4620320.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
                     QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPCYLSCGFILEE
                     GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWG
                     AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
                     LRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLV
                     IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            complement(32014..33135)
                     /gene="hypD"
                     /locus_tag="JQ356_000115"
     CDS             complement(32014..33135)
                     /gene="hypD"
                     /locus_tag="JQ356_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HAY4620321.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
                     AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
                     QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA"
     gene            complement(33135..33407)
                     /gene="hypC"
                     /locus_tag="JQ356_000116"
     CDS             complement(33135..33407)
                     /gene="hypC"
                     /locus_tag="JQ356_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HAY4620322.1"
                     /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
                     GQWVLVHVGFAMSVITEAEARDTLDALQNMFDVEPDVGALLYGEEK"
     gene            complement(33398..34270)
                     /gene="hypB"
                     /locus_tag="JQ356_000117"
     CDS             complement(33398..34270)
                     /gene="hypB"
                     /locus_tag="JQ356_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HAY4620323.1"
                     /translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK
                     APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
                     MDQWLNWLETQRCA"
     gene            complement(34274..34624)
                     /gene="hypA"
                     /locus_tag="JQ356_000118"
     CDS             complement(34274..34624)
                     /gene="hypA"
                     /locus_tag="JQ356_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY4620324.1"
                     /translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
                     AFCFDLVCRGSVAEGCKLHLEEQEVECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
                     DDGLQIRRIEIDQE"
     gene            34836..35297
                     /gene="hycA"
                     /locus_tag="JQ356_000119"
     CDS             34836..35297
                     /gene="hycA"
                     /locus_tag="JQ356_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase regulator HycA"
                     /protein_id="HAY4620325.1"
                     /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
                     AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKEGEDKQRIAQAQLSIDGM
                     IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA"
     gene            35422..36033
                     /locus_tag="JQ356_000120"
     CDS             35422..36033
                     /locus_tag="JQ356_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY4620326.1"
                     /translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEK
                     ESAPQLCHHCEDAPCAVVCPVNVITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
                     RPLDIPANANTPKAPPAPPAPARISTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
                     TKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK"
     gene            36030..37856
                     /gene="hycC"
                     /locus_tag="JQ356_000121"
     CDS             36030..37856
                     /gene="hycC"
                     /locus_tag="JQ356_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HAY4620327.1"
                     /translation="MSAISLINSGVVWFVAAAVLAFLFSFQKTLSGWIAGIGGAVGSL
                     YTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHA
                     QVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEVMALCAVFLTSNSKEGKLWFALGRL
                     GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV
                     PQAHANASAPAAALFSTVVMKIGLLGILILSLLGGNAPLWWGIVLLVLGMITAFVGGL
                     YALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSL
                     FKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEW
                     VIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAEN
                     ATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLI
                     ACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKL
                     RKWLNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA"
     gene            37859..38782
                     /gene="hycD"
                     /locus_tag="JQ356_000122"
     CDS             37859..38782
                     /gene="hycD"
                     /locus_tag="JQ356_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycD"
                     /protein_id="HAY4620328.1"
                     /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
                     LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
                     TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
                     VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN
                     SMARLRLDITSRITWAGFGFAFLAFVSLLAA"
     gene            38800..40509
                     /locus_tag="JQ356_000123"
     CDS             38800..40509
                     /locus_tag="JQ356_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase large subunit"
                     /protein_id="HAY4620329.1"
                     /translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKEQLTVTVKVNYLPE
                     VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
                     SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
                     PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
                     GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
                     EVERLHSHLLNLGLACHFTSFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
                     RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
                     MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
                     NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
                     LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
                     PLK"
     gene            40519..41061
                     /gene="hycF"
                     /locus_tag="JQ356_000124"
     CDS             40519..41061
                     /gene="hycF"
                     /locus_tag="JQ356_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HAY4620330.1"
                     /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
                     ACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
                     QKCLVPSDRIELTRHMKEAI"
     gene            41061..41828
                     /gene="hycG"
                     /locus_tag="JQ356_000125"
     CDS             41061..41828
                     /gene="hycG"
                     /locus_tag="JQ356_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycG"
                     /protein_id="HAY4620331.1"
                     /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD
                     CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
                     APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
                     GLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQ
                     LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEVRIR"
     gene            41825..42235
                     /locus_tag="JQ356_000126"
     CDS             41825..42235
                     /locus_tag="JQ356_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HycH family protein"
                     /protein_id="HAY4620332.1"
                     /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
                     QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
     gene            42228..42698
                     /gene="hycI"
                     /locus_tag="JQ356_000127"
     CDS             42228..42698
                     /gene="hycI"
                     /locus_tag="JQ356_000127"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HAY4620333.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
                     NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
                     EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE"
     gene            complement(42857..44281)
                     /locus_tag="JQ356_000128"
     CDS             complement(42857..44281)
                     /locus_tag="JQ356_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY4620334.1"
                     /translation="MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMA
                     VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD
                     EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
                     ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEDGENQDQVKYQAAHHQLVASA
                     LAAKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPA
                     YSARVFREKGVTIDKALGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL
                     RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYR
                     ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGT
                     LTRTRKKSFWWYKKVIASNGEDLE"
     gene            complement(44290..45747)
                     /gene="ascF"
                     /locus_tag="JQ356_000129"
     CDS             complement(44290..45747)
                     /gene="ascF"
                     /locus_tag="JQ356_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose/arbutin/salicin transporter
                     subunit IIBC"
                     /protein_id="HAY4620335.1"
                     /translation="MAKNYAALARSEIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
                     PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTPRRI
                     GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
                     LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
                     YTVIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
                     AISALVYSIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
                     IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
                     LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL
                     TLLLGFEDIPVEEAAAQARKHQSVQPTVAKEVSLN"
     gene            46007..47017
                     /locus_tag="JQ356_000130"
     CDS             46007..47017
                     /locus_tag="JQ356_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY4620336.1"
                     /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
                     YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
                     AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW
                     CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA
                     NGKWTPASGAEGVETLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD
                     DIAIAPYIVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIHRDSLIAL
                     SR"
     gene            47166..47693
                     /gene="hydN"
                     /locus_tag="JQ356_000131"
     CDS             47166..47693
                     /gene="hydN"
                     /locus_tag="JQ356_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HAY4620337.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRTALMF"
     gene            47846..50098
                     /gene="hypF"
                     /locus_tag="JQ356_000132"
     CDS             47846..50098
                     /gene="hypF"
                     /locus_tag="JQ356_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HAY4620338.1"
                     /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
                     GVEVRLREDPETFLVQLHQHCPPLARIDSVEREPYIWSQLPTEFTIRQSAGGAMNTQI
                     VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
                     KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
                     LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
                     EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP
                     PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPKYVV
                     HDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE
                     NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPE
                     TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
                     LAASCHGVTHPVTMPLVDNQLDLAAFWQQWLNWQAQVNQRAWAFHDALAQGFAALMRE
                     QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
                     RWLAGEVQNG"
     gene            complement(50226..51359)
                     /gene="norW"
                     /locus_tag="JQ356_000133"
                     /pseudo
     CDS             complement(50226..51359)
                     /gene="norW"
                     /locus_tag="JQ356_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417191.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
     gene            complement(51356..52795)
                     /gene="norV"
                     /locus_tag="JQ356_000134"
     CDS             complement(51356..52795)
                     /gene="norV"
                     /locus_tag="JQ356_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic nitric oxide reductase
                     flavorubredoxin"
                     /protein_id="HAY4620339.1"
                     /translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
                     FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALELCREHGREI
                     ARQWALAPLPQSTVNKVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT
                     PWSEVPDNFLCPECSLGKDVFEELASEAK"
     gene            52982..54496
                     /gene="norR"
                     /locus_tag="JQ356_000135"
     CDS             52982..54496
                     /gene="norR"
                     /locus_tag="JQ356_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311592.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HAY4620340.1"
                     /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
                     RYDSRQFIPLAIDGLAKGVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
                     LLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
                     TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREE
                     VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGAR
                     NLLQHYRFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVP
                     VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGMKD"
     gene            complement(54493..55458)
                     /gene="gutQ"
                     /locus_tag="JQ356_000136"
     CDS             complement(54493..55458)
                     /gene="gutQ"
                     /locus_tag="JQ356_000136"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
                     /protein_id="HAY4620341.1"
                     /translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK
                     VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
                     KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
                     LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV
                     MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTL
                     QAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
     gene            complement(55451..56224)
                     /gene="srlR"
                     /locus_tag="JQ356_000137"
                     /gene_synonym="gutR"
     CDS             complement(55451..56224)
                     /gene="srlR"
                     /locus_tag="JQ356_000137"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HAY4620342.1"
                     /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
                     VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
                     FEHFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
                     VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
     gene            complement(56291..56649)
                     /gene="gutM"
                     /locus_tag="JQ356_000138"
                     /pseudo
     CDS             complement(56291..56649)
                     /gene="gutM"
                     /locus_tag="JQ356_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417186.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
     gene            complement(56754..57533)
                     /gene="srlD"
                     /locus_tag="JQ356_000139"
     CDS             complement(56754..57533)
                     /gene="srlD"
                     /locus_tag="JQ356_000139"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HAY4620343.1"
                     /translation="MNQVAVVIGGGQTLGAFLCHGLVAEGYRVAVVDIQSDKAANVAQ
                     EINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            complement(57537..57908)
                     /gene="srlB"
                     /locus_tag="JQ356_000140"
                     /gene_synonym="gutB"
     CDS             complement(57537..57908)
                     /gene="srlB"
                     /locus_tag="JQ356_000140"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HAY4620344.1"
                     /translation="MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
                     HGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
                     AGPVPDDIAPGSVLKFESVKE"
     gene            complement(57919..58878)
                     /gene="srlE"
                     /locus_tag="JQ356_000141"
                     /gene_synonym="gutE"
     CDS             complement(57919..58878)
                     /gene="srlE"
                     /locus_tag="JQ356_000141"
                     /gene_synonym="gutE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HAY4620345.1"
                     /translation="MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQ
                     LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
                     VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
                     LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
                     GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
     gene            complement(58875..59438)
                     /gene="srlA"
                     /locus_tag="JQ356_000142"
                     /gene_synonym="gutA"
     CDS             complement(58875..59438)
                     /gene="srlA"
                     /locus_tag="JQ356_000142"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HAY4620346.1"
                     /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
                     INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSQGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLALSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLAGATS"
     gene            59694..60779
                     /gene="mltB"
                     /locus_tag="JQ356_000143"
     CDS             59694..60779
                     /gene="mltB"
                     /locus_tag="JQ356_000143"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HAY4620347.1"
                     /translation="MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
                     SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
                     VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
                     GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
                     GQAPGLPNGFKTRYSISQLATAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
                     ITRYNHSTHYAMAVWQLGQAVALARVQ"
     gene            60924..61421
                     /gene="pncC"
                     /locus_tag="JQ356_000144"
     CDS             60924..61421
                     /gene="pncC"
                     /locus_tag="JQ356_000144"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HAY4620348.1"
                     /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
                     SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMVIGALKAARADYAVSI
                     SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
                     FLQNT"
     gene            61501..62562
                     /gene="recA"
                     /locus_tag="JQ356_000145"
     CDS             61501..62562
                     /gene="recA"
                     /locus_tag="JQ356_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HAY4620349.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
                     TPDFSVDDSEGVAETNEDF"
     gene            62805..63305
                     /gene="recX"
                     /locus_tag="JQ356_000146"
     CDS             62805..63305
                     /gene="recX"
                     /locus_tag="JQ356_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HAY4620350.1"
                     /translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN
                     GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
                     REATEKAMRECDIDWCALARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
                     WRNFAD"
     gene            63433..66063
                     /gene="alaS"
                     /locus_tag="JQ356_000147"
     CDS             63433..66063
                     /gene="alaS"
                     /locus_tag="JQ356_000147"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HAY4620351.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
                     SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKDANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
                     PIETNIMDLEVAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
                     QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
                     STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVKGWVSAKLQ"
     gene            66298..66483
                     /gene="csrA"
                     /locus_tag="JQ356_000148"
     CDS             66298..66483
                     /gene="csrA"
                     /locus_tag="JQ356_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HAY4620352.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            66799..66891
                     /locus_tag="JQ356_000149"
     tRNA            66799..66891
                     /locus_tag="JQ356_000149"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:66833..66835,aa:Ser,seq:gct)
BASE COUNT        15646 a        17109 c        18323 g        15814 t
ORIGIN      
        1 ttaatgaatc actctggtcc ggtgatttaa tcgggtcaga agaaccggat gaacaagctt
       61 tcagccaggg ttgtgcggcc tagtttgccg acagtaacaa gaaggcgttg ctggctgaaa
      121 ttggcgtcgg caccctggat caggcgatga tggcagtgat gccgtttaaa cataataatc
      181 tgcggcttct ggggctgagt aacaaaatcc tgctggctga tgagatccac gcctgtgacg
      241 cttatatgtc gtgcattctt gaagggctga tcgagcggca ggcgcgtggc ggaaacagcg
      301 ttattttgct ttctgctacg ttatctcaac agcagcgcga caaactcgtc gccgcctttg
      361 cgcgtggtgc agagggccag caagaagccc cactcctggg aaaagatgat tacccctggc
      421 tgacgcatgt cacgaaaacc gatgtacatt cgcaccgggt agcgacgcgc aaagaagttg
      481 aacgtagcgt gagcgtgggt tggctccata gtgaacaaga gtgtattgcg cgtatcgaat
      541 cggcggtaag tcaggggaaa tgcatcgcct ggattcggaa ttctgttgat gacgctattc
      601 aggtgtatcg tcagctgctt gcccgcggcg tcattcctgc ttccagcctt tcactttttc
      661 atagccgctt tgcttttagc gatcgccagc gaattgaaac ggaaacgctg gcacgctttg
      721 gtaaatattg tagtttacag agagcgtctc aagtcattgt ttgtacacaa gtaattgaac
      781 aaagcgtgga tattgacctg gacgaaatga tctccgacct ggcccccatt gatttgctaa
      841 tccagcgagc ggggcgatta cagcggcata tccgcgatat taatggtcag ttaaagcgtg
      901 acggaaaaga cgagcgttcc ccccctgaat tgctgattct ggcccccgtc tgggatgacg
      961 ctcctggtga cgaatggttc ggcagtgcca tgcgtaacag tgcatatgtc tatcccgatc
     1021 atgggcgaat ctggctgacg cagcgtgtgc tgcgtgagca aggcgctatt cagatgccgc
     1081 acgcagcccg gcttcttatt gaatcagttt acggtgagga cgtggtaatg ccggaaggat
     1141 ttgcccgcag cgagcaggag caagtgggca aatattactg tgatcgcgca agggctaaaa
     1201 agtatgtgct gaacttcagg ctcggctatg ccgccaatat caacgattac cttccggaaa
     1261 aactgtcgac acgtctggct gaagagtctg tttccctgtg gctggctacc tgtattgacg
     1321 gtgtggtgaa gccttatgcc accggtgctc acgcatggga aatgagcgtt gtcagagtgc
     1381 gccgaagctg gtggaaaaaa catcgggatg agttttcttt actggaaggg gatgcgttca
     1441 ggcagtggtg cgttgaacag cggcaagatc cggaaatggc aaacgtgatt ttagtcaccg
     1501 atgacgaaag ttgcgggtat tcggccaggg agggattgat tggcaaggtt ggttgagatg
     1561 tctgcgacaa gactctctga atagttgata tacagaaaag gatggaagga tggacaaccg
     1621 acctgggatg gtctttttta cgagaggatg cgtatgaact cgttttcact tctgacaacc
     1681 ccgtggttgc ccgttcgttt taaagacgga acgacaggca aactggcacc agtcgatctg
     1741 gctgatgaaa atgttgtcga tatcgctgcg ccgcgggcag atctccaggg ggcggcctgg
     1801 cagtttttgc tggggctact acaaaccagc ttcgcgccaa aagatcaacg tagttgggat
     1861 gatatctggg aagacggact ggaagctgaa aagctaaggg aagcattgct gtctttagaa
     1921 catgcttttc agtttgggcc agattcccct tcatttatgc aggattttga tgaattaaaa
     1981 gttaaggcaa cttttattgc ttcgcttctt cctgacgcac caggaaaaca aacaaaagaa
     2041 cgaaatacag accattttat taagcgagac acaactcagc atctgtgcct gcattgtgtg
     2101 cctttagcgc ttttttcaat ccagttgaat gcacctatag gtggacgcgg ttactatcct
     2161 gggctacgtg gcggagggcc tctgacgaca cttatagaat tgctggagta tcagggcaat
     2221 caacaaaccc ctttgtggcg aaagctgtgg ctaaacgtaa tgccgcaaga tgaagccgat
     2281 ttacctttac caaaaacctt tgatgacctg gtctttcctt ggcttgcacc gacgcgtacc
     2341 agcgaactgg acggtgctgt ggtaacggat gaacaagtca ataaacttca ggcctactgg
     2401 ggaatgccac gacgtatacg tattgatttt aagacaacct caataggtaa ctgcgacatt
     2461 tgcggtaggc agagcgatgc tcttttgggc ttgatgtcac tcaaaaacta tggtgttcaa
     2521 tacgtcatgt ggcgccatcc tctaacacct taccgtctgc cgcttaaaga gggtggagat
     2581 ttttactcag ttaaaccaca acctggtggt ttaatctggc gcgactggtt aggcctcata
     2641 gaggtaggta actcaaaaaa caatactgaa ctccccgcac aggtcgtgaa acttttgaat
     2701 gccagcaatc taaagcagac aagggtgggc ttatggggat ttggttttga ttttgaagat
     2761 atgaaggttc gttgttggta tgaacaccat ttcccgctgt tgttaaacaa aaaagaagac
     2821 ctaataccta agttgcgtct ggcagcgcaa gcggcatcac acattctaag cttgttacac
     2881 cgagcgttga aagaagcatg gttctctgag aagaaaacca caaagcttga tttcggtttt
     2941 gtggatattg acttctggaa caaaactcag catcgattcc tgagattagt gcgcaaaatt
     3001 gaagaaggtc aggatccgga cgaattactc agtaaatggc aaaaggaaat gtggttattc
     3061 gcgcgtcagg attttgacga tcgtgtcttt accaatccat atgagcccgt tgatttggaa
     3121 cgcgtcatga ccgcacgcaa gaaatatttt acaacatcag cggagaagca aaatgctaac
     3181 gccgccaggg agaaaaagca ggaggctgct gaatgagtat tgtaaaagat gagcataaag
     3241 ttgcgctgcg taaatggcat gaagagttgc aggataaacg cggcgagcgt gccagtctgc
     3301 ggcgtagtac gacggttaat gatgtttgtc tgacggatgg atttcgcctg tttcttaaga
     3361 acagacaaat aaagtggcag gatgaacccg agtggcgtat caccgcacta gcgctgatag
     3421 cagcagttag cgccaatgtt aaagctattg acgaacggca gccttttgcc gcgcaactgg
     3481 cggcggtaat gaaaaagggg cggtttactc gtttgttggc agtaaaaacg ccggatgatt
     3541 tattgcggca gttacgccgt gcggtcaaat tattaaacgg ttccgtcaat cttgactctc
     3601 tggaagaggg ggtcttccgc tggtgccagg agagcgatga cctgctcaat catcaccgcc
     3661 gccagcagcg accaacagaa tttatccgta tccgctgggc gctgggcgct gggcgctggg
     3721 cgctgggcgc tgggcgctgg gcgctgggcg ctgggcgctg gaatattacc aggctggcga
     3781 cgccgataac gaacaaaatt aataaaggac tatctcatga caacatttat tcagcttcat
     3841 ttgttaaccg cttaccctgc tgccaatctt aaccgtgatg attccggctc tccgaaaact
     3901 gtgattctgg gtggagcaac gcgtctgcgc gtttcctcgc aaagtctgaa gcgtgcttgg
     3961 cgcacttctg aactttttga acaggcgctg gcgggccata ttggtgttcg tagcgggcgt
     4021 attgcgcgtg aggcggcaac tatcctgatt gagaaaggaa tcgaagataa aaaagccatc
     4081 gaatgggcag tagagatagc cgattatctt gggaaagcca aaaaagacaa aaaacaaaaa
     4141 aacgacaaaa aaccaaaaga tccgctcact agcgccgaaa ctgaacagct cgtccatatc
     4201 agcccggcag aatttgacgc cgtaaaagcg ctggcccatc aactggcaga agaaaagcgc
     4261 gcgccaaaag agaaagatct cgctttgtta cgtaaagacc gtatggcggt agatatcgct
     4321 atgtttggtc gtatgctggc gaaaaaaccc gggtttaatg tagaagccgc ctgccaggtc
     4381 gcgcatgcgt ttggtgtcag tgaaacgatt gtcgaaaatg attttttcac cgccgtagat
     4441 gatttacgcc aggcttctga agatgccggt gccggtcatg tagatgaaac cggattcggt
     4501 tctgcgctgt tctacaccta tatcttatct gcattgataa agatctgctg gtagaaaacc
     4561 tcggcggtga cgaagcgtta gctaatcaga ccatacgcgc ctttacggaa gccgcgctta
     4621 aagtctcccc aaccggtaaa caaaacagct ttgccagccg ggcttatgcc tcctgggcgc
     4681 tggcagaaaa aggcaccgat caaccgcgtt ctctggcggc agctttctat gaacccatta
     4741 atggcacccg tcagttagag gtggcggtgc agcgtattac aactcttcgc gaaaatatga
     4801 atacggtcta cgaacagaag accgattacg caagttttga cgtgatgaac aaacagggaa
     4861 gcatgaagga cgtgctggac tttatctgcg cgtaaggggc ggcttatgag ccaatatctg
     4921 atttttcagc ttcatgggcc gatggcatcc tggggcgtcg atgcccccgg cgaagtgcgt
     4981 catacccatg aactgccttc gctctcagca ttgctggggc tgctggctgc cggggtaggg
     5041 atccggcgtg atgataccga acgcttaaac gcgtttaatc gccactattc actggtggtt
     5101 tgcgccagcc gtaacccgcg ctgggcacgg gattatcaca cggtccagat gccaaaagag
     5161 gtgcgtaaag cacgttattt cagccgtcgc gaagagttga gcgaccctga gcttttgagc
     5221 gcgattatct cccggcgcga ctactacacc gatgcctggt ggatggtggc ggtggcaaca
     5281 acagccgatg cgccttacag cctcgaacag ttgcaggacg gtttacgcca tccagttttt
     5341 ccgctttatc tggggcgaaa aagtcatccg ctggcattac ctcttgcgcc gttactgctc
     5401 gaaggcaacg cgtgtgatgc cttatgtaat gcataccaac agtatcagga tcatttccat
     5461 aaactgaaag tttcactccc gaaacttcag gatgaatgct ggtgggaagg gaaacacgac
     5521 ggcctggtcg cgagcaaaat attacgccgc cgggatgttc ctttaaatcg tcagcagtgg
     5581 ctgtttgggg aacgcaccgt caatcagggg ccgtggctca gcaaggagga accatgtacc
     5641 tctcaagaat aaccttacat accggccagc tttcgcctgc gcagttgctg catctggtgg
     5701 atcgcggtga atatgtgatg catcagtggc tgtgggatct cttccctagc ggcaaagaaa
     5761 ggcaatttct ttatcgtcgg gaagaactcc agggcgcgtt tcgctttttt gtactgtcgc
     5821 aggaacgccc ggcggaaagt gatacgttca ccatagaatg ccggtcattt gcgcccgagc
     5881 tgtgtaccgg acaacaactt tgtttcaacc tgcgggcgaa tccaacaatc tgtaaagcgg
     5941 gcaagcgcca cgatctgctg atggaggcga aacggcaggt gagggggcag gcggaaggaa
     6001 gtgatgtctg gttgcatcaa caacaggcgg cgctggactg gctggcagcg cagggggaga
     6061 gaagtggttt tacactgctg gatatctcgg ttgatgccta ccgacaacag caactgcggc
     6121 gggaaaactc ccggcaactg atccagttca gtagcgtgga ttatacgggg atgcttacgg
     6181 tcaccgatcc cgggttattt ctgcaacgtc tcagtcaggg gtatggcaaa agccgcgcgt
     6241 tcggctgtgg tctgatgctg atcaaacccg gagcagaggc gtgacgtttg taccgctgag
     6301 cccgatcccg ttaaaagatc gcacctctat gatcttcctc cagtacgggc aaatcgacgt
     6361 actggacggc gctttcgtgc tgatcgataa aaccgggatc cgcacgcaca ttccggtggg
     6421 atcggtcgcc tgcattatgc tcgaaccggg aacgagagtt tcccacgcgg cggtgcatct
     6481 ggccgccacg gtggggacgc tacaggtctg ggtcggtgaa gcgggtgttc gcgtctactc
     6541 ttccggacaa cccggtgggg cgcgtgctga taagttactc taccaggcaa agctggcttt
     6601 aacggaagat ctacgtctga aggtggtgcg caaaatgtat gaattacgtt ttcgtgagcc
     6661 accgccagct cgccgttcag tggagcagct acgtggaatt gagggatctc gcgttcgcca
     6721 gacgtatgca ttactggcga aacaatatgg tgtgaaatgg aatggtcgca aatacgatcc
     6781 taaagactgg gaaaaaggcg atgttgtgaa tcgctgcatc agtgctgcta catcatgtct
     6841 gtacggtata tctgaagcgg cagtattagc cgcgggatat gcgcccgcta ttgggtttat
     6901 ccatagtggc aaaccgcttt catttgttta tgacatagcc gatatcatta aatttgattc
     6961 ggttgtacca aaggcatttg aaatagcggc gaggcaaccc gcagaacctg ataaagaagt
     7021 cagattagcc tgtcgtgata ttttccgtag cactaagtta acgggcaaat taataccgtt
     7081 aattgaggaa gtccttgccg caggtgaaat tgaaccgcca caacctgcgc cggatatgtt
     7141 accgccagcc atccccgaac ctgaaacgtt gggcgatagc ggtcatcgag gacgcggctg
     7201 atgagcatgg tcgtggttgt tacagaaaat gtcccgccac gcttacgtgg acggctcgca
     7261 atctggctac tggaagtgcg tgccggtgtg tatgttggtg atacatcaaa acgtattcgg
     7321 gagatgatct ggcagcaaat tacccaactg gctggttgcg gaaatgtggt gatggcctgg
     7381 gcgaccaata ccgagtcggg ttttgaattt cagacctggg gagaaaacag acgtattccg
     7441 gtggatttgg atgggttacg tttggtttct tttcttcctg ttgataatca ataagttatc
     7501 cgttctttaa aaataaggaa atgttttaat ttagttggta gattgttgat gcggaataaa
     7561 tttgtttaaa aacagttatg tatgcttagt gtgttccccg cgccagcggg gataaaccgg
     7621 gcgcactgga tgcgataatg gatatcactt agaattcccc gcccctgcgg tagaactccc
     7681 agctcccatt ttcaaaccca tcaagacgcc ttcgccagct ccttcaccaa cggtagcatt
     7741 atccgcataa cgtcacggca gcgacgttct attcttccag gaagtgcctt atcaatatgc
     7801 tgttgattat ccagtcttac gtcatgccag ctatttcccg cagggaatgc ggctgttttt
     7861 gcgcgttgct gataaccatc cttattccca agattccagt tagtcgcttc caccgaaagt
     7921 acagcaatgc ccgctttgtc gaatatttct gcgtcattac aacacccagt gcctttcgga
     7981 taatttttat tcaaccccgg attggtcgtt gcggctattc cgtgactgcg cgcaattgcc
     8041 agcgccctgt cgcgcgttaa tttccttact gcttcagtgg tttttacacc gctgttgaaa
     8101 tacaatttat cgccaacaat taagttatcg agattaatca ccagcagcgt atttttcttt
     8161 tcggtgtcac tcatccgctt gagtaaattc tcagcgccta atttcccttc ctcttcgccg
     8221 ctggtcgcca caaatcgaat accatactcg gtaggcgtat ttttcaggcg ttctgccaat
     8281 tccagcatga cacctaaacc tgcggcgtta tcatccattc cttgtaacgt cagcccgccg
     8341 agattggcat cggcgtcagc atcgctcagc ggggcgtaag tatccagatg cgccataatg
     8401 atgatctgct gcggcgcttt tccttcatga gcggcaatca ccgtacttcc cgtcacgtta
     8461 tgccagctct tacgattatc gcgggcggta taaatatacc gactattaaa tgtccgaata
     8521 tcactgcgat aacccatttg ctgaaactgt tggcgaatat aatcggcaga taacatttct
     8581 gcaggagttc cggtcatgcg tcccggaaag aaagtagcaa tatgtcgtgc ctgagtatta
     8641 gcaaaatcgc caggtttagg tgacgaggcg tgtacgggga gaataaagca tacgccgagc
     8701 gccagggcag cggtacggtg gcgcaatgcg gaaaacatag tgagtcctta aataccatgc
     8761 aaattttttt accgccatag tatgaaactg ccgctgcgct aaaacaattt caaatcttcc
     8821 taaacgcccg aaatccggtg ccttaagcac tttttgatat tagctttgcc aaatcgttat
     8881 tccgttaagg aactactcat tctaattggt aatttcattc gttctcttac gctccctata
     8941 gtcgaaacat ctgatggcaa gaaaatagcg gtattgcaaa ggaacggtta tggctcaaaa
     9001 acgacttact cacctgcggc aactggaggc ggaaagcatc cacattattc gcgaggtggc
     9061 ggcagaattc tcaaatccgg tgatgctcta ctctatcggt aaagattcca gcgtcatgct
     9121 gcatctggcg cgcaaggcgt tttatccagg tacgctgcct ttcccgttgc tgcatgtcga
     9181 taccggctgg aaattccgcg agatgtatga gttccgcgat cgtactgcta aagcctacgg
     9241 ctgcgagctg ctggtgcata aaaacccgga aggcgtggcg atggggatta atccattcgt
     9301 acacggcagc gcgaaacata ccgatattat gaaaactgaa ggcctgaaac aggcgctgaa
     9361 caaatacggt tttgatgccg ccttcggtgg tgcgcgccgt gatgaagaga aatcccgcgc
     9421 taaagagcga atctactctt tccgtgaccg cttccatcgc tgggatccga aaaatcagcg
     9481 cccggagctg tggcacaact acaacgggca aattaacaaa ggtgaaagca tccgcgtctt
     9541 cccgctctct aactggaccg agcaggatat ctggcaatac atctggctgg aaaatatcga
     9601 cattgtgcca ctgtatctcg ctgcggaacg tccggttctg gaacgcgacg gtatgttgat
     9661 gatgattgat gacaaccgta tcgacctgca accgggcgaa gtgattaaaa aacggatggt
     9721 gcgtttccgt acgctgggct gctggccgct gaccggtgcg gtggagtcaa atgcacaaac
     9781 actgccggag atcatcgaag agatgctggt ttctaccacc agtgaacgtc agggccgcgt
     9841 gattgaccgc gaccaggcgg ggtctatgga gctgaaaaaa cgtcaggggt atttttaaga
     9901 tgaacaccgc acttgcacaa caaatcgcca atgaaggcgg cgtcgaagcc tggatgattg
     9961 cgcaacaaca taaaagcctg ctgcgttttc tgacctgtgg tagcgtcgat gacggcaaaa
    10021 gtaccctgat tggtcgcctg ctgcacgata cccgccaaat ctacgaagat cagctctcat
    10081 cgctgcataa cgacagtaag cgtcacggca cccagggcga aaagctggat ctggcactgc
    10141 tggtggacgg cctgcaagct gagcgcgaac agggcatcac cattgacgtg gcttaccgtt
    10201 atttctctac cgagaagcgt aaatttatta tcgccgacac cccagggcac gagcagtaca
    10261 ctcgcaatat ggcaactggc gcatcgacat gtgaactggc gatcttactg atcgatgccc
    10321 gtaaaggcgt gctcgatcaa acccgtcgtc acagttttat ctccacactg ttggggatca
    10381 aacatctggt cgtggcgatc aacaaaatgg atctggtgga ttacagtgaa gagacgttca
    10441 cccatattcg tgaagattat ttgacctttg ccgggcagct gccgggtaat ctggatatcc
    10501 gctttgtgcc gctctctgca ctggaaggcg acaacgtggc atcgcaaagt gaaagtatgt
    10561 cgtggtacag cggtccgaca ctgctcgaag tgctggaaac cgtggagatc cagcgagtgg
    10621 tggatgccca gccaatgcgc ttcccggtgc agtacgttaa tcgcccgaat ctcgattttc
    10681 gtggctacgc cggaacgctg gcatccggtc gcgtggaagt cgggcaacgt gtcaaagcgc
    10741 tgccctctgg tgtggaatca aacgtcgcgc ggatcgtgac ttttgatggt gatcgcgaag
    10801 aagcctttgc cggagaagcg atcaccctgg tgctgacgga tgagatcgac atcagccgtg
    10861 gcgatctgct gctggcggca gacgaagcgt taccggcggt gccgagcgcg tcggtggatg
    10921 tggtatggat ggcggaacag ccgctttccc cgggccagag ttacgacatc aaaattgccg
    10981 gtaagaagac gcgcgcgcgt gttgatggca ttcgctatcc ggttgatatt aataacctta
    11041 cccagcgtga agttgaaaac ctgccactga atgggatcgg cctcgtggat ctcacttttg
    11101 acgagccgct ggtgttagat cgttatcaac aaaatccggt gacgggtggg ctgattttta
    11161 tcgatcgcct gagcaacgtg actgttggtg ccggtatggt gcatgagccg aaaaacgagg
    11221 ccgccgttgc gtcatctgaa ttcagtgcat tcgaactgga attgaatgcc ctggttcgtc
    11281 gccactttcc gcactggggc gcgcgcgatt tgctggggga taaataatgg cgctgcatga
    11341 cgaaaacgtc gtctggcata gccatccggt cactgtgcaa caacgcgagc tacaccacgg
    11401 tcatcgtggt gtagtgctgt ggtttaccgg cctctctggg tccggtaaat caacggtcgc
    11461 cggggcgctg gaggaggcgt tacataaact cggcgtcagt acgtatctgc tggatggcga
    11521 caatgttcgc cacggattat gcagcgatct cggttttagc gatgccgatc gtaaagagaa
    11581 tatccgtcgc gtcggtgaag tggcgaattt gatggttgaa gccggactgg tggtgctgac
    11641 cgcatttatc tcgccacacc gcgccgaacg ccagatggtt cgcgaacgcg taggagaagg
    11701 gcgctttatc gaagtgtttg tcgatacgcc gctggcgatt tgcgaagccc gcgatcccaa
    11761 aggcttatat aagaaagcgc gtgccggtga actgcgcaac tttacgggaa tagattccgt
    11821 ttacgaagcg cctgaatcgg cagaaattca tctcaatggt gaacaattag taacaaattt
    11881 ggtacagcaa ttattagatc tgttgagaca gaacgatatt atcagatcct gagacaccac
    11941 cgggtttcca tgcccggttc gtcaaagtaa caggatcaaa tatgcgtaat agccataaca
    12001 ttacactaac aaataacgac agccttactg aggatgaaga aaccacatgg tcactgcctg
    12061 gtgccgtggt cggttttatc tcctggttat ttgcgctggc gatgccgatg ttgatttatg
    12121 gctctaacac gctgttcttc tttatctaca cctggccttt ctttctggca ctgatgcctg
    12181 tcgcggtagt ggtggggatt gcgctgcatt cattgatgga cggaaagcta cgctacagta
    12241 ttgttttcac cctggtgaca gtaggcatta tgtttggcgc actgtttatg tggctactgg
    12301 gctaatttgt actttcttgt ctcctctgtt cataattcaa accgtaacta ataatgagat
    12361 tatgttctgc acgccctagg tatacgtaac aatggacaaa tgtggtacat ttgcccgcgt
    12421 tgtcgcggta tccccaacag aggatgtaga gtcgtcttcg gatgcatggg atgatgatgc
    12481 cgtttttcag ggggcaggat gggtaaacta acgctgctgt tgctggctat tctggtctgg
    12541 ctacagtatt cgctgtggtt cggtaagaac ggtatacatg actatacccg cgtcaatgat
    12601 gatgtggcgg cacagcaagc tacaaacgcg aaacttaaag cgcgaaacga tcaacttttt
    12661 gccgaaattg acgatctcaa tggcggccag gaggcgctcg aagagcgtgc gcgtaatgaa
    12721 ctcagcatga ccaggccggg cgaaactttt tatcgtctgg tgcctgacgc gtcgaagcgc
    12781 gcacagtctg cggggcaaaa caatcgataa atcagcccgg gaattaacat ggcaaccact
    12841 catttggatg tttgcgccgt ggttccggcg gccggatttg gccgtcgaat gcaaacggaa
    12901 tgtcctaagc aatatctctc aatcggtaat caaaccattc ttgaacactc ggtgcatgcg
    12961 ctgctggcgc atccccgggt gaaacgtgtc gtcattgcca taagtcctgg cgatagccgt
    13021 tttgcacaac ttcctctggc gaatcatccg caaatcaccg ttgtagatgg cggtgatgag
    13081 cgtgccgatt ccgtgctggc aggtttgaaa gccgctggcg acgcgcagtg ggtattggtg
    13141 catgacgccg ctcgtccttg tctgcatcag gatgacctcg cgcgattgtt ggcgttgagc
    13201 gaaaccagcc gcacgggagg gatcctagcc gcaccagtgc gcgatacgat gaaacgtgcc
    13261 gaaccgggca aaaatgccat tgctcatacc gttgatcgca acggcttatg gcacgcgctg
    13321 acgccgcaat ttttccctcg tgagctgtta catgactgtc tgacgcgcgc tctaaatgaa
    13381 ggcgcgacta ttaccgacga agcctcggcg ctggaatatt gcggattcca tcctcagttg
    13441 gtcgaaggcc gtgcggataa cattaaagtc acgcgcccgg aagatttggc actggccgag
    13501 ttttacctca cccgaaccat ccatcaggag aatacataat gcgaattgga cacggttttg
    13561 acgtacatgc ctttggcggt gaaggcccaa ttatcattgg tggcgtacgc attccttacg
    13621 aaaaaggatt gctggcgcat tctgatggcg acgtggcgct ccatgcgttg accgatgcat
    13681 tgcttggcgc ggcggcgctg ggggatatcg gcaagctgtt cccggatacc gatccggcat
    13741 ttaaaggtgc cgacagccgc gagctgctac gcgaagcctg gcgtcgtatt caggcgaagg
    13801 gttataccct gggcaacgtc gatgtcacta tcatcgctca ggcaccgaag atgttgccgc
    13861 acattccaca aatgcgcgtg tttattgccg aagatctcgg ctgccatatg gatgatgtta
    13921 acgtgaaagc cactactacg gaaaaacttg gatttaccgg acgtggggaa gggattgcct
    13981 gtgaagcggt ggcgctactc attaaggcaa caaaatgatt gagtttgata atctcactta
    14041 cctccacggt aaaccgcaag gcaccgggct gctgaaagcc aatccggaag actttgtggt
    14101 ggtggaagat ttgggctttg agcctgatgg tgaaggtgag catattctgg ttagaatcct
    14161 caaaaacggc tgcaataccc gttttgtggc ggatgcactg gcgaaattcc tgaaaattca
    14221 tgcccgtgaa gtcagcttcg ctgggcaaaa agacaaacat gctgttacgg aacagtggtt
    14281 atgcgctcgc gtgccaggca aggaaatgcc cgatctgagc gcctttcaac tggaaggctg
    14341 ccaggtgctg gagtatgcgc ggcacaagcg caagctgcgt ttaggcgcgc tgaaaggtaa
    14401 cgcctttacc ctggttctac gcgaagtgag caatcgcgat gacgttgaac aacgtctgat
    14461 cgatatttgc gtaaaaggtg taccgaacta cttcggtgcc caacgttttg ggattggcgg
    14521 tagcaacttg cagggcgcgc tgcgctgggc gcaaaccaat actccggtgc gcgatcgcaa
    14581 taaacggagt ttttggttgt cggcagcccg cagtgcgttg tttaatcaga ttgttgctga
    14641 gcgcctcaaa aaagcagacg ttaatcaagt tgttgacggc gatgcgctac aattagccgg
    14701 acgtggtagc tggtttgtag caaccaccga agaactggcg gaattacagc atcgcgtcaa
    14761 cgataaagag ctgatgataa ccgccgcatt gccgggcagt ggcgaatggg gaactcagcg
    14821 taaagcgctg gcattcgaac aagcagctgt cgccgcagaa actgaattac aagctttact
    14881 ggtgcgcgaa aaagttgaag ccgcgcgcag agcgatgctg ctgtatccgc aacaattaag
    14941 ctggaattgg tgggatgacg tcaccgtaga gatccgtttc tggcttccgg cgggtagttt
    15001 tgcaaccagc gttgtcaggg aacttatcaa cacaacaggt gattatgcgc atattgctga
    15061 gtaatgatga cggggtacat gcacccggta tacaaacgct ggcgaaagcc ttgcgtgagt
    15121 ttgctgacgt tcaggtggtc gcccccgatc gtaaccgcag cggcgcttca aattctctga
    15181 cactggaatc ctccctgcgc acgtttacct ttgaaaatgg tgatattgct gtgcaaatgg
    15241 gaaccccgac cgattgcgtc tatcttggcg tgaatgctct gatgcgtccg cgcccggaca
    15301 ttgttgtgtc cggcattaac gccgggccga atctggggga tgacgttatt tattccggta
    15361 cggtagccgc cgcgatggaa ggccgtcatt taggttttcc ggcgctggcc gtctcgcttg
    15421 acgggcataa acattacgac actgccgcgg cggtaacctg ttcaattttg cgcgcactgt
    15481 gtaaagagcc gctgcgcacc ggacgtattc ttaatattaa cgttccggat ttacccttgg
    15541 atcaaatcaa aggtattcgc gtgacgcgct gcggtacacg acatccggca gatcaggtga
    15601 tcccgcagca agatccgcgc ggcaatacgc tgtactggat tggcccgccg ggcggtaaat
    15661 gtgatgccgg tccggggacc gattttgctg cggtagatga gggctatgtc tccatcacgc
    15721 cgctgcatgt ggatttaact gcgcatagcg cgcaagatgt ggtttcagac tggttaaaca
    15781 gcgtgggagt tggcacgcaa tggtaagcag acgcgtacaa gcacttctgg atcaattacg
    15841 tgcgcaaggt attcaggatg agcaggtgct gaatgcactt gctgccgtgc cgcgtgaaaa
    15901 attcgttgat gaagcgtttg aacaaaaagc ctgggacaat atcgccttgc cgataggtca
    15961 ggggcagaca atttcgcagc cgtatatggt ggcgcgaatg accgaattac tcgagctgac
    16021 gccgcagtcg cgggtgctgg aaattggcac cggttcggga tatcaaacgg caatcctggc
    16081 gcatcttgtc cagcatgttt gctcggtcga acggattaaa ggtttgcagt ggcaggcgcg
    16141 tcgccgcctg aaaaatcttg atttacataa tgtttcaacc cgtcatggcg atggatggca
    16201 aggttggcag gcacgcgcgc cgtttgacgc tatcattgtt acggcggcac cgccggaaat
    16261 tccaactgcg ctaatgacgc agctggacga aggcgggatt ctcgtcttac ccgtagggga
    16321 ggagcaccag tatttgaaac gggtgcgtcg tcggggaggc gaatttatta tcgataccgt
    16381 ggaggccgtg cgctttgtcc ctttagtgaa gggggagctg gcttaaaacg tgaggaaata
    16441 cctggatttt tcctggttat tttgccgcag gtcagcgtat cgtgaacatc ttttccagtg
    16501 ttcagtaggg tgccttgcac ggtaattatg tcactggtta ttaaccaatt tttcctgggg
    16561 gataaatgag cgcgggaagc ccaaaattca ccgttcgccg cattgcggct ttgtcactgg
    16621 tttcgctatg gctggcaggc tgttctgaca cttcaaatcc accggcaccg gtcagctccg
    16681 ttaatggcaa tgcgcctgca aataccaatt ctggtatgtt gattacgccg ccgccgaaaa
    16741 tggggacgac gtctacagcc cagcaaccgc aaatccagcc agtgcagcca gtagctcagc
    16801 agccggtaca gatggaaaac ggacgcatcg tctataaccg tcagtatggg aacattccga
    16861 aaggcagtta tagcggcagt acctataccg tgaaaaaagg cgacacactt ttctatatcg
    16921 cctggattac tggcaacgat ttccgtgacc ttgctcagcg caacaatatt caggcaccat
    16981 acgcgctgaa cgttggtcag accttgcagg tgggtaatgc ttccggtacg ccaatcactg
    17041 gcggaaatgc cattacccag gccgacgcag cagagcaagg agttgtgatc aagcctgcac
    17101 aaaattccac cgttgctgtt gcgtcgcaac cgacaattac gtattctgaa tcttcgggtg
    17161 aacagagtgc taacaaaatg ttgccgaaca acaagccagc tgcgaccacg gtcacagcgc
    17221 ctgtaacggt accaacagca agcacaaccg agccaactgt cagcagtaca tcaaccagta
    17281 cgcctatctc cacctggcgc tggccgactg agggcaaagt gatcgaaacc tttggcgctt
    17341 ctgagggggg caacaagggg attgatatcg caggcagcaa aggacaggca attatcgcga
    17401 ccgcagatgg ccgcgttgtt tatgccggta acgcgctgcg cggctacggt aatctgatta
    17461 tcatcaaaca taatgatgat tacctgagtg cctacgccca taacgacaca atgctggtcc
    17521 gggaacaaca agaagtgaag gcggggcaaa aaatagcaac catgggtagc accggaacca
    17581 gttcaacacg cttgcatttt gaaattcgtt acaaggggaa atccgtaaac ccgctgcgtt
    17641 atttgccgca gcgataaatc ggcggaacca ggcttttgct tgaatgttcc gtcaagggat
    17701 cacgggtagg agccacctta tgagtcagaa tacgctgaaa gttcatgatt taaatgaaga
    17761 tgcggaattt gatgagaacg gagttgaggt ttttgacgaa aaggccttag tagaagagga
    17821 acccagtgat aacgatttgg ccgaagagga actgttatcg cagggagcca cacagcgagt
    17881 gttggacgcg actcagcttt accttggtga gattggttat tcaccactgt taacggccga
    17941 agaagaagtt tattttgcgc gtcgcgcact gcgtggagat gtcgcctctc gccgccggat
    18001 gatcgagagt aacttgcgtc tggtggtaaa aattgcccgc cgttatggca atcgtggtct
    18061 ggcgttgctg gaccttatcg aagagggcaa cctggggctg atccgcgcgg tagagaagtt
    18121 tgacccggaa cgtggtttcc gcttctcaac atacgcaacc tggtggattc gccagacgat
    18181 tgaacgggcg attatgaacc aaacccgtac tattcgtttg ccgattcaca tcgtaaagga
    18241 gctgaacgtt tacctgcgaa ccgcacgtga gttgtcccat aagctggacc atgaaccaag
    18301 tgcggaagag atcgcagagc aactggataa gccagttgat gacgtcagcc gtatgcttcg
    18361 tcttaacgag cgcattacct cggtagacac cccgctgggt ggtgattccg aaaaagcgtt
    18421 gctggacatc ctggccgatg aaaaagagaa cggtccggaa gataccacgc aagatgacga
    18481 tatgaagcag agcatcgtca aatggctgtt cgagctgaac gccaaacagc gtgaagtgct
    18541 ggcacgtcga ttcggtttgc tggggtacga agcggcaaca ctggaagatg taggtcgtga
    18601 aattggcctc acccgtgaac gtgttcgcca gattcaggtt gaaggcctgc gccgtttgcg
    18661 tgaaatcctg caaacgcagg ggctgaatat cgaagcgctg ttccgcgagt aagtaagcat
    18721 ctgtcagaaa ggccagtctc aagcgaggct ggccttttct gtgcacaata aaaggtccga
    18781 tgcccatcgg acctttttat taaggtcaaa ttaccgccca tacgcaccag gtaattaaga
    18841 atccggtaaa accgagaatg gtcgttaaca ctgtccaggt tttcagaccg tctgctaccg
    18901 acaaccccag atatttggtc acaatccaga accctgagtc attaatatgt gacgcgccaa
    18961 gcccaccaaa gcaggctgcc agcgtcacca atacgcactg aatcggattc aatcccatca
    19021 ccgcttctga gagtaacccg ccggttgtca ggattgctac ggttgctgac ccctgcgatg
    19081 cacgcagagc cagtgaaata ataaatgcgg ctggtaacag aggcaggtca atcatttgta
    19141 gcatattggc aagggctttg ccgacgcccg attccaccag cactttgcca aatacccctc
    19201 cagcaccagt aaccaaaatc actaccgccg cagtgggaag ggctgagccc ataatgtcgc
    19261 tggtgtgttg taagctccag ccgcgacgta aagccaataa ccagaatgcc agcaccagcg
    19321 caatcattag agctaccatt ggtgagccga tcagctgtag cgtaccaagc aggggatgcg
    19381 aaggcggcat cagtgttgcg gaaaccgtac ccgtcatgat aatcgcgata ggaataacaa
    19441 ttagcgaggt gaccagcgcg acgcccggtg gatttatttt atcgcttaat tttgtcgcgc
    19501 cttcctcact ggccggagcc agttgcatct gttccagtac ttctactgac atcgcatatt
    19561 ggcgcttatt gattattttc gctgcaaagt agccaacaat ccctacggga atagaaatcg
    19621 caataccgat gatggttagc cagccgatgt ctgcgtggag taaccccgct gtggcgacag
    19681 ggcctggatg cggcggtact gccacatgaa cagttagcat gattccagcg acaggcaggc
    19741 caaatttgag tggcgatatt ttggcaacct tggcaaaacc gtaaatgatt ggcgcaagaa
    19801 taataaagct gacatcaaag aagacgggaa taccgaggaa gaacgctgcc agagtcagcg
    19861 cagcgatagt tcgtttgtca cctaacttgc gactgaaata attagccagt gactctgcac
    19921 caccagagtg ttcgatcata cgccccagca tagcgcccag accaataata atagtgacgg
    19981 aaccaagcac accgcccatc ccggcgatca tcactttacc cacttcgccc gccggtatac
    20041 ccgccgcaag tgcgactaac aggctgacga ggagcagagc aacgaatggt tgtacctttg
    20101 ccttgatgac cagcagcaac agcatgatta cgccagctaa cgcaatgcat aacaatgtaa
    20161 ttgtggacat gggaaaccct gtctgaaagt tatagttaac ctaccccatc cgtagatggg
    20221 gggatgtatg ggtacgttgt aattagggat ttaacgaatt agcgccaggc gtcaaaccag
    20281 ccaagccctt cttcggtgag gccacgaggt ttatattcac aaccgatcca gccctgatat
    20341 cccacctcat cgaacaggcg gaacagccac ggatagttga tttctccatc gtccggtcat
    20401 gtcgatcagg tagtccggca atttgtacgt gcgcatattt cccagcgtag tcgcggatta
    20461 aatgcgtcag gttgccatct actttttgcg catgaaaagt atctagttga ataaacacgt
    20521 tatctcgcgc aacctcttca acaatagcca gtgcctgata ctggctggag aagagataat
    20581 gaggcttaac gtcggggctg agtgcttcaa ctaatattcg cttgccgtgt ggcgcaaagc
    20641 ggtcggcagc gtagcggaga ttatcgataa atactgcccg gtaccgttca gcatcttcgc
    20701 cagcgggcac gacgcctgcc atcacatgga cttgttcaca attgagcgcc aatgcatatt
    20761 ccagtgccag gtcgatgtct gcgtgtgctt cgtgctcacg tccgggaagg gcggataatc
    20821 cccattcccc cgcattaata tctccgggag cggtattgaa cagcgccagt gtcagatggt
    20881 tttgctccag ttgcttttgg atttgcaggg tggagtagtc atagggaaac agaaattcca
    20941 cagcatcgaa cccggctttt cgcgctgcgg cgaagcgttc aataaaaggc acttcggtga
    21001 acatcatgga taaattagct gcaaaacgag gcattgcatt aactccttaa ttccgcaatt
    21061 tcacctgcgg tcagataacg gatcgggcgg tcaccgagaa taaaaatcag ctttgccgtt
    21121 tcctccagct cttccatatt gttggcggct tcttgcaggc tttcaccgca aaccactggg
    21181 ccatgatttg ccagtaaaaa agcctgattg tctgctgcca gttccgccag atcctgtgcg
    21241 atgcgtttat cgcccggtcg gtaatagggc accagcggga catttcccat ccgcatcacc
    21301 acgtatggtg tgaacggacg aataacgttg ctgctgtcca gcccttgcag gcaggaaagc
    21361 accgtcgacc atgtgctgtg caaatgcacc accgctttac agcgcggatt gttgcgatac
    21421 agcgccagat gaaagagcac ctctttcgag ggtttgtcac cacttaacca ttcgccatcc
    21481 gcggcgactt tggaaagccg ctgcggatcg agattgccca ggcatgaacc tgtcggtgtc
    21541 gccagtaaat tcccgtcagg taaaagcagc gacagattgc cagccgaacc ggttgcatag
    21601 ccgcgctgaa agaatgaact ggcaatccgc gtcatctcct ctcgcaaaga ctgctctact
    21661 tttgcgaaat cgctcatgat aaaaactctc tttgggctcg tgaaaaaaag gcttcatcac
    21721 cgaagttgcc agatttaagg gcgagtgaga caggcttatc cagtgcgttt acccacggca
    21781 cgccggggga aatggttggg ccaatatgaa acccttttat gcccaggctc tgtgtgacta
    21841 cgccggaggt ctcaccgcct gcgacaataa agcgtgtcac gccttccgct gctaaccgcg
    21901 ccgctagttg agaaaacaga gtttctactg cctgactggc tttttgtgca ccgtattgct
    21961 gttgaattgc tgccaatgcg tcagtgctgg cggtggcaaa aaccagtgga gcaagtacac
    22021 tttcctggcc cagaacccac tctgccagtt cgtgtgcata agcggccaga gtttcggttg
    22081 agaggcagcg tgccacatca acttcacggg ctggtgcaat ttgacggtaa tgtgccacct
    22141 ggcggttggt catttgagag catgaaccgg agagcactac gccgcgccca gcgagcggat
    22201 gccctgcttc gcgagcctgg ttaccgtttt cttgcgccca ctgccgggcc aggccaatcg
    22261 ccagaccaga accgcccgtt accagtgggg catcgcgcaa ggcttctccc tgaatttcca
    22321 gatggtgttc ggtcagcgca tcaagcaccg cgtagcggta gccctcttgc tgtaagcgag
    22381 ccagctcttg acgaacggca tccacacctt gttcgaaaac atgtgccgaa acgacgccgc
    22441 agcgccctgt ggattgcgct tcaaccagac ggggaagata gctgtcggtc atgggattta
    22501 ccgggtgatg gcgcatcccg gattcggcca gcagttgatt cattacgaac aaatacccct
    22561 gataaaccgt acgtccgttg accgacaggg ccggagagaa gaccgtaaac ggcgtgtcga
    22621 gagcatccat taatgcatcg gtaaccgggc cgatattacc tttcgccgta ctgtcgaaag
    22681 tagagcagta tttgaaatag atctgtttgc aaccttgctg ttgcaaccag ctcagagccg
    22741 ccagcgattg ctgtgtggct tcaaccaccg gacaggagcg cgttttcagg ctgatcacca
    22801 gtgcgtcgat tgcttccggc attttacctg ttggaacacc gttaatttgt accgttggta
    22861 gaccgttttc caccagaaaa ctggcgatat ccgtcgcgcc ggtaaaatca tcggcgataa
    22921 cgccaatctt gatcatgatt tcgctcccgg tagagtgatg ccagagaaaa tcttgataac
    22981 tgcgctatcg tcttctttcc cgtaacctgc gttactggcg ctggtgaaca tattcaatgc
    23041 tgttgaggcc aatggcagcg ggaagtgcag ggctttggct gtatcggcaa ccagaccaag
    23101 atccttaaca aaaatatcga cggctgaatg cggggtgtaa tcgccatcca ccacatgacg
    23161 catccggttt tcgaacatcc aggaatttcc ggcggcattg gtcacgacgt catacatcac
    23221 atccagcggg atccccgcac gggctgcaag tgccatcgct tcggctccgg cagcaatatg
    23281 tacgcccgct aacaactggt gaataatttt tacggtcgaa cctagtcccg gttctgcacc
    23341 tatgcgataa acttttccgg caacggcttc cagcacgggt gccagtcgtt caaaggcaat
    23401 atcgctaccg gaggccatga cagtcatttc accgttagcg gcttttactg catcaccaga
    23461 aactggcgca tccagcattt ccagatcgaa tccagccaga gcggtagcaa tttcttgcgc
    23521 atcagcacta gcgatagtgg aagaaaccat tactgccgta ccgggtttca gatgttgtgc
    23581 aacgcctgtt tcaccaaaca gcacctgttt aacctgggcc gcattgacca ccagcaccag
    23641 cagagcgtcc agtttttcgg caaacgtcgc ggcgttatca gaaaccccgc aagcacctgc
    23701 ctctttcaac gtagcgcagg cattgctgtt caggtctgcg ccccaggtag aaagacctgc
    23761 gcggacacat gacagtgctg ctcccattcc cattgaccct aagccaacga taccgacatg
    23821 aaactcagat cccgttttca tctgctctcc ttgttaattt aagtgatatt ttgtttgata
    23881 ttgtgaatat aagcgctgga agataacgat atggtgagcc tattcacata aattaacatt
    23941 gtgtgttatt ttatgtgaac taagcgttag ttgcgccgcg cacgtttcgc aggcaaatag
    24001 cgtagaatgt cagcaggaca aaggaaggag caaaagttga tacccgtaga gcgtcgccaa
    24061 atcatccttg agatggtagc tgaaaaaggc attgtcagta ttgctgaact aacggacaga
    24121 atgaatgtat cacatatgac cattcgtcgg gatttacaaa aactggagca gcagggagcc
    24181 gttgtgctgg tgtccggagg cgtccagtct ccgggacgcg tggcgcatga accttctcat
    24241 caggtaaaaa ctgcgctagc aatgacgcaa aaagcggcta ttggcaagct ggcggcaagt
    24301 cttgttcagc cgggaagttg tatctatctg gatgcgggaa cgaccacgtt agcgatagca
    24361 cagcatctga ttcacatgga gtcactgact gtggtcacaa acgatttcgt tattgcgaac
    24421 tacttgctcg acaacagtaa ttgcacaatt attcacactg gcggtgcagt gtgtcgggaa
    24481 aaccgttcct gtgtcgggga agccgctgcg accatgctgc gcagcctgat gattgatcag
    24541 gcttttattt ctgcatcgtc atggagtgtg cgggggattt ctacgccagc ggaagataaa
    24601 gtcacggtga aacgggcgat tgctagtgcc agccgccagc gagttttggt ctgtgatgcg
    24661 acgaaatatg gtcaggtggc gacatggctg gcgttaccat taagcgagtt tgatcagatt
    24721 attacagacg acggtttgcc ggagagtgcc agtcgcgcgc tggcgaagca ggatctctct
    24781 ttgctggtag cgaaaaatga ataatggcct gcaataacat ctggttactc atgcttcaca
    24841 gaagaagcat gagactacct tattttataa aatgacagcc gcccactttt cggcgatccg
    24901 gtatcaatat aaatctggtt agcgaacgtc tgaatgttat caaacatcat atgtccaaat
    24961 ataaaataat cagcgccgtt tatttgttgt aactcgccat taagcgattt ctgcacacga
    25021 taaacaggcc agagtaattc gctctccgct atttctttgc caaagagata ttcatcaccc
    25081 ggataatctg catgtgcgat gacatatttt attatgtcgt tagtgatttc aataatatgt
    25141 ggaaggtgat ggaatttcag caacagatct attgcctctt gttgctctga atcatttaaa
    25201 tcgaaaaacc agtcaccacc gctggcaagc cacatattgc catcgccggt cgcgaacgca
    25261 tccagctcca ttgcttcgtg gttgccttta acggagataa accagggctg gtttagcagg
    25321 cgcaggacgt caagactctc cggcccacga tcaatattat cgccgacaga aataagtaag
    25381 tcggtttcag ggcaaaaaga gagttgatgt aagcgggatt gtaataattg atattcacca
    25441 tgaatatcac caacgaccca tatatggcga tagtgatggg cattaatttt ttgatagcgt
    25501 gtagatggca tggttttacc ctgtaaaata agctttccta ttatacaggg ggtttttatt
    25561 ttattcgtca gttgtcgtta atattcccga tagcaaaaga ctatcgggaa ttgttattac
    25621 accaggctct tcaagcgata aatccattcc agcgcctgac gcggagtcag tgaatccggg
    25681 tccaggtttt ccagagcttc gaccgctggc gaggtttctt ccggtactga cagcaaagac
    25741 atttgcgtac catccacttg cgtagcggcg gcgttcggcg aaatgctttc cagctcacgc
    25801 agtttttgcc gtgcgcgctt aatcacctct tttggcacgc ctgccagagc tgcaaccgcc
    25861 aggccgtagc ttttgctcgc cgcgccatcc tgcacgctat gcataaaggc aatggtgtct
    25921 ccgtgctcca gcgcatcgag atgcacgttg gcgacgtctt ccattttctc cggtagctgg
    25981 gtcagctcga aatagtgggt ggcaaacagc gtcaatgcct taatcttatt cgccagattt
    26041 tctgcgcacg cccacgccag cgacagacca tcgtaggtgg acgttccacg cccgatctca
    26101 tccattaaca ccagactgta ttcggtggcg ttatgtaaaa tattggcggt ttcagtcatc
    26161 tccaccataa aggttgagcg cccggaagcc aggtcatctg ccgcgcctac gcgggtaaag
    26221 atgcgatcga taggtccaat ctcgactttt tgtgccggta catagctgcc aatgtaggcc
    26281 atcagcgcaa tcagtgcggt ctggcgcata taggtacttt taccgcccat gttcgggccg
    26341 gtaataatca acatacggcg ctgcggcgac agattcagcg ggttagcgat aaatggctca
    26401 ttcagtactt gttcaactac cggatggcga ccttcggtaa tgcgaatgcc cggtttatca
    26461 atgaaggtcg ggcaggtgta gttcagggta taggcccgtt ccgccaggtt aaccagcacg
    26521 tcgagttccg ccagcgcgct cgcgctctgt tgcaacgctt ccagatgcgg caacagcagg
    26581 tcgaacagct cttcataaag ctgtttttcc agtgccagtg ctttgccttt tgaggtgaga
    26641 actttatctt cgtactcttt tagctctgga atgatgtagc gctcggcgtt tttcagcgtc
    26701 tggcgacgca tgtagttgat gggtgccaga tggctttgcc cacggctgat ttgaatgtag
    26761 tagccgtgca ccgcattaaa gccaactttc agcgtgtcca ggccggtacg ttcacgctcg
    26821 cggacttcca gacgctccag ataatcggtc gcgccgtcag ccagcgcgcg ccactcatcc
    26881 agctcttcgt tatagcccga tgcgataaca ccaccgtcgc gtaccagcac cggcggtgtg
    26941 tcgatgattg ctcgctccag cagatcgcgc agctcggcaa actcgcccat cttctcacgt
    27001 agcgcctgta ccggtgcact atcgacagtt tctaactgtg cacgcagctc cggcagttgc
    27061 tggaaagcgt ggcgcatacg ggccagatcg cgtgggcgag cagttcgtaa agccagacgt
    27121 gccagaatac gttcaaggtc gccgacctga cgcagtaccg gctgtagccc ggcggtgaaa
    27181 tcctgcaatg cgccaatagt ttgctggcgc tcaagcaaca cgcgggtatc gcgcactggc
    27241 atatgcagcc agcgtttcag catacgacta cccatcggcg tgacggtgca gtcgagcaca
    27301 gaagccagcg tattttccgc accgcccgcc aggttctgag taatttccag gttacgacgt
    27361 gtcgcggcat ccataatgat gctgtcctgc tcacgttcca tggtgataga acgaatatgc
    27421 ggcagggtcg tgcgttgggt atctttcgca tactgcaaca gacaaccggc agcacaaagt
    27481 ccgcgcggcg cgttctcgac gccaaaaccg accagatcgc gggtgccaaa ttgcagattc
    27541 aactgctggc gcgcggtgtc gatttcaaac tcccacagcg ggcgacggcg caggccgcga
    27601 cggccttcaa tcagcgacat ctcggcgaaa tcttctgcat acagcagttc cgccggatta
    27661 gtgcgttgca gctctgccgc catcgtttcg cggtcggccg gttcgctcag gcgaaaacgc
    27721 ccggagctga tatccagcgt cgcgtagccg aaacctttgc tgtcctgcca gatagccgcc
    27781 agcaggttgt cctgacgctc ctgtaacagg gcttcatcgc tgatggtgcc tggcgtaacg
    27841 atacgcacaa ctttgcgctc aaccggacct ttgctggtcg ccggatcgcc aatttgttcg
    27901 cagatggcaa cggactctcc ctgattcacc agtttggcga gatagttttc caccgcatgg
    27961 tagggaatcc ccgccatcgg gatcggctct cccgccgaag caccgcgttt ggtcagtgaa
    28021 atatccagca gttgcgacgc gcgttttgcg tcgtcataaa acagttcata aaaatcaccc
    28081 atccggtaaa acagcaggat ctcgggatgc tgggctttca gcctgagata ctgctgcatc
    28141 atgggcgtat gggcgtcgaa attttctatt gcactcatgg ggttatgtcc ggttccctga
    28201 tattaaatgg ggtgtgatgg tttttatttt cgttgtaatc acataaggcg cacatgatac
    28261 cggagttaat catttcaggg gaagaagcga acggcgagtt cttgatgctg gttccgggaa
    28321 agatgctgtt ttgcagcttt tgcgtgatgc ttatgaagca agtacgcaaa attgcgtcgg
    28381 ttgaataaac ctcctccttc agagccatag tcccctttca aattaagttg taatataaat
    28441 acaccttaag agtatggagg cagcatgtcc ggcaagcgta tctctcgtga aaaactgacg
    28501 attaaaaaaa tgatcgatct ttatcaagcg aaatgcccgc aggcgtcagc ggagccggag
    28561 cattacgagg cgttgtttgt ttacgcgcaa aagcggctgg ataaatgtgt gttcggcgaa
    28621 gagaaaccag cctgtaagca gtgtccggtg cactgttacc agcctgcaaa gcgtgaagag
    28681 atgaaacaga ttatgcgttg ggccgggccg agaatgctgt ggcgtcatcc gatcttaacc
    28741 gtgcgtcatc tcatcgatga caagcgtccg gtgccagaac tgccggaaaa atatcgtccg
    28801 aaaaaacctc gtgaatagta tgccggacag gcagatctgt ccggcaattt gcagttaaat
    28861 caatgccgat ttatcaattc ccagccgctt catccgtgac agcagggtcg tgcgtttcag
    28921 ccccagacgt tgcgcagcgc ctttaggccc ggcaaccacg ccgttggttt ctttcagcac
    28981 gcgaacaatc aactgatatt catcttcgcc ctcctgagcg acaaccgttg cggcaggcgg
    29041 cgtttcaggc tccggtaaag caatatctgg caatgacagc tgcagcacgt tgccgcgtgt
    29101 tagcaatact gcgcgctcaa tgacgttttc cagttcgcgt acgttacccg gccactccat
    29161 gttgctcaag gtgcgcagcg tctcggctgg aatgctgtcg atattgcgcc ccagacgacg
    29221 ggcaattttg aaggtaaagg ctttcgccag cagcggaata tcttccggac gctcgcgtag
    29281 tggcggcagg tgaatcggga atacgttcag gcggtaatag agatcgctac ggaactctcg
    29341 gtcggcgacc atttttttca gatcgcggtt agtcgcggca attaaacgta cgtccgtctg
    29401 aatgattttg ttgctgccga gacgttcaaa ctcctgttcc tgcaatacac gcagcaactt
    29461 cggctgtaac tccagtggca tatcgcccac ttcgtcgagg aacagggagc ttttatccgc
    29521 cagttcaaaa cgaccaatgc gctgggcgct ggcaccggta aaagccccac gctcatgacc
    29581 aaacagatcg ctttccagca atccggcagg catcgccgcg cagttcattt tgaccatgcg
    29641 gcgattatta cgcccactga gattatggat cgcgcgggca atcagctctt tacccgtgcc
    29701 agtttcaccg aggatcagca cggtactgtc actttgcgcc accatttcaa cttgtttaag
    29761 cacgctgtac atggcttcgc tgcggccaat aatctcgcca aattcactat caacattgtt
    29821 gagctgctcg gtcagggcga ggttttcatc aaccagccgt tctttcagac gatggatttc
    29881 ctgataggcg agggcgttat cgacagcgat tgccacacgt tcggcaatct ggcgcagcaa
    29941 attcagattg gtagtggtaa acactttctc ttcgcattgc gccagtttca gcacgcccag
    30001 catggtgtcg ccagacatca gcggtaacag gcacaaggtt tgaatctggt tgccccaggt
    30061 gtcgaacaac atgcgttcat agggggctaa atcgtcccgc tcgtggagat tgatcagcag
    30121 catctcttta cttttgaaca cgcgttcggt gagggttccg gcttcatcga cttcgctctg
    30181 ttcgtgggcg ggatgttgtt tatcaagata gtgagtggag tagatgttga gtttgttttt
    30241 acggtggctg cgtaagacga tactgatatc gtcaatgtcg aaatagtaat ggatttcttt
    30301 ggcgacttcg ctgaccagtt cgtccatatc caggcgggaa agcaccgcgt tggtaatggc
    30361 aaccaggatg cggaagttat cgcgctcccg gcataacaac tcatagtcga cattgttgac
    30421 gacgcggctc tggatttgtt cggtgacgac agaaacgatc tgcgtaaatg tttgcagacg
    30481 attgaactct ttttcgctcc agggacgatc gtcataacga ataaattcac agccaccaaa
    30541 aatatgccct tccgccgcca gtggcatcag gcaatagtga ccaaattagg ggtatagccc
    30601 accagcgacc agctgcggcc aggtttcaca aaattcttcg taactgcaat gcagcgtatc
    30661 agggcgcgac aaaatgcggc gtaccggacc gtgtgccaga acagtttcgt cttcatattt
    30721 aatgggggtg tctttttcac gcgatgcgta ataagacgca cgttgagtct gcgcttgcca
    30781 caacacaata gccgcgttgt cggcgagcgc agaacgcttt accagttgcg aaagagcctc
    30841 acacagcgag gccagatcgg gctgctgcaa tagtgtccga gtgatgtcga acaacccttg
    30901 ctgtccgaga tcactcatcg gtgtatatga cattttgttc ttccaggaaa gcaccgcaaa
    30961 gcggtgcaaa aggtcattga ctaactatag gagatttaga attttattag catatacgcg
    31021 gaagcggttc ggcgtgtggt aaatcgaggg ttcgtttcac accatacaga ccggcaagac
    31081 gaacaccttt acgttccacc acttcaccaa ttagcgccgc gtctttcccc agtggatggg
    31141 aatgtaacgc tgccagcact tgctctgctg cgttgcgttc aacagctatt actagtttgc
    31201 cttcgttggc aaagttaagg gcgtccagtc ccagcagttc gcaaacgccg cgcacagcag
    31261 gtttaaccgg cagtgctgat tcagaaattt caataccaca accgcaggct gccgcgaact
    31321 catgaaccac cgcgtttaca ccaccacggg tggcatcacg cagcgctttc acgccgggaa
    31381 tgtcacgcag cgtctgaata agcggcgtca gcaccgcgca gtcgctgacc agttcaccat
    31441 ccagccccag ttgttcacgc aggttaagga tagtcgcccc gtggtcgccg agtgtaccgc
    31501 taaccagcaa tacatcgcct gcggttagcg tctgtgcgcc ccagtgaata ttcgccggaa
    31561 ttgcgcccat gccagcggtg ttgataaaca gtttatctgc cgcgccgcgc tgcaccactt
    31621 tagtatcgcc agtaacgatg gcaatgcctg ccgtgcgggc ggtttctgcc atgctggtca
    31681 ctacggcttt cagtgtctcc atcggcaatc cttcttcgag gataaagcca caggagagat
    31741 agcacggaat agcgccactg accgcaacgt cattcgcggt gccgcaaatc gccagcttgc
    31801 cgatattacc gccaggaaag aacagcgggt caatgacgta actgtcggtg gagaacgcca
    31861 gacgatcgcc ttctgctacc agctgcgcca gatcaagacg tgcctggtct tcctgctctg
    31921 ccagccacgg gttggcaaag gcttccataa acaggctgtt gattaattgc tgcatcgcct
    31981 ggccaccgct gccgtgggcg agttggatat tattcacgct tcactctcct gctgacgata
    32041 ctgataccac gcggcgcacg ctccttcgga ggagaccatc agtgcaccaa atgcggtttg
    32101 aggattacag gtgttaccaa acagcgggca ttgatgcggc ttacatttgc ccgttaatac
    32161 ctcaccacaa cgcgcgcgcg ggtcatcgca gacctgctgc ggtgccgggc ggaaatgtgc
    32221 ttcggcatcg aatcgttgat aatccggcgt caggtgcacg ccagaagatt caatcacgcc
    32281 taagccgcgc cattcgctgt cgccgttgac acagaacaca tcggcaatcg cctgttgcgc
    32341 cagcaggtta ccggcatccg gtaccacccg acgatactga ttctctacct tgctgtgggc
    32401 cgctattttc tgctccacca gcatcaccac gccttgcagt agatcaaggg gttcgaaacc
    32461 agcgaccacc agcggacgat gaaaatcgct ggcgataaaa ttataggcat cagtgccgat
    32521 aaccatacta acgtggcccg gcgcgaggaa cgcgtcgata ccgttatccg gctgttccag
    32581 caaactgcgc agcgtcggga taagcgtaat gtgctggcag aagaagtaaa aattctgcac
    32641 atcacgcgct ttcgcctgtt gcagagtgat ggcggtggtc ggcatggtgg tttcaaaacc
    32701 taagccgaag aacaccactt tgcgggttgg attctcctgc gccagtttca acgcatccat
    32761 cggcgagtaa acgatgcgca catcggcacc gcgtgctttt gcctgcaaca gcgatccctg
    32821 tttccctggt acgcgcatgg catcgccaaa ggtacagaag atgacttccg gatggctggc
    32881 aatctccacg caggtgtcga ttctacccat cggcagtacg cacaccgggc aacccggacc
    32941 gtggataaac tcaacgtttt caggcagtaa ctggtcgagg ccgaatttaa aaatagcgtg
    33001 ggtatgacca ccgcacactt ccataatccg cagagggcgt tcggcggtgt aagagagatg
    33061 tgaagcacgt tcgcgcagat gctcaattaa ctgcatcacc tgttccggcg cgcgatattc
    33121 atcaacaaaa cgcattattt ttcctcgcca tacaacagcg cgccgacatc cggctcaacg
    33181 tcaaacatgt tttgtaaggc gtcgagagtg tcgcgtgctt cggcttcagt aattacgctc
    33241 atggcaaagc caacgtgtac cagtacccac tggcccacgc gcggctgacc gttttcatcg
    33301 cagctgccga ctaacgttaa atcgacatcg cgctgaatgc cgcagacgtc gacttttgcc
    33361 tggttgccgt caatggtgcg gatctggccg ggaacgccta tgcacatcgc tgtgtctcca
    33421 gccagttcag ccactggtcc atcccttcac cgctggtggc ggaaataagg atgatttcaa
    33481 tttctggatt gacttcgcgg gcgcaggcga tgcacttctc aacgtcaaag ttgagatacg
    33541 gcaacaggtc aactttgttg agcagcatca gcgaggcggc ggcaaacata tgcggatatt
    33601 tcagcggttt gtcttcacct tcggtaacgg aaagcaccgc cactttgtgt ttttcaccga
    33661 gatcgaagct ggccgggcat acgaggttgc caacgttttc gataaacaga ataccgttat
    33721 cgtccagtgg cagacgcggt gcggcgtcgg caatcatctg tgcgtcaaga tggcagcctt
    33781 tacctgtgtt cacctgaatc gctggtgtgc cggtagcgcg aatgcgtgcg gcatcgttca
    33841 cggtttgctg gtcaccttca ataaccgcgc acggaacgct gtctttcagg cgcattaggg
    33901 tttccgtcag cagggtggtt ttaccggaac ctgggctgga aaccaggttg agcaccagtt
    33961 gcttgcgggc agcaaagcgc gcgcggttgc gttcagccag acggttgttt ttgtccagca
    34021 cgtcaatttc gacttccagc atccgacgct ggctcatgcc cggtgcgtga gtgcccgctt
    34081 cgccatgacc gtaatgcagg tcgccttctt cagtctggct gggggtaaat tcaggcgctt
    34141 taatgccggt gattttcatc ttcgggcgtg ccgccggggc aaatggcgcg ctacgaaacg
    34201 cggaatgagg gttatgttca tcaccctcga tatacaggtt gccttcaccg caaccgcatg
    34261 ttgtacacat cgctcactcc tggtctattt ctatccgccg aatctgtaaa ccgtcgtctg
    34321 ccacaatctg tagcatgtca ccatgacact gtggacagcg gcggacgcgc tgggtcaata
    34381 gcgtcacata ctgttggcat gtttcacacc agcattcgac ctcttgttct tcgaggtgca
    34441 gtttacaacc ttccgccacg ctgccgcggc aaaccagatc aaaacaaaag gcaagagagc
    34501 tggtttcgac acaagaaaat gcgccaattt tgagccagac cccagttacg cgttttgcgc
    34561 cgtgttttgc ggcctgctgt tcgatcaatt ccagtgcccg ttggcagagg gttatttcgt
    34621 gcatatcgcc tcccattaac tattgccagc tacaagcaat aattgtgcca gtgttgatta
    34681 tccctgcggt gaataatgtc gatgatgtcg aaatgacacg tcgacacggc gacgaaattc
    34741 atctttagct taaaaatcgt tttaataaca ataaattaaa aattggcaca gaaaatgctt
    34801 aaagctggca tctctgttaa acgggtaacc tgacaatgac tatttgggaa ataagcgaga
    34861 aagccgatta catcgcacag cggcatcgtc gcctacagga ccagtggcac atctactgca
    34921 attcgctggt tcaggggatc acgttatcga aagcgcgcct gcatcacgcc atgagctgcg
    34981 cgccggacaa agaactctgt ttcgtccttt ttgaacattt tcgtatttac gtcaccctgg
    35041 cggatggctt taacagccac accatcgagt attacgtcga aacaaaagag ggcgaagaca
    35101 aacagcggat tgcgcaggcg caactgagca ttgacggcat gattgatggc aaggtcaaca
    35161 tccgcgatcg cgaacaggtt ctggaacact atctcgaaaa aatcgctggc gtttacgaca
    35221 gcttatacac cgccattgaa aacaatgtgc cggtgaattt aagccaactg gtaaagggac
    35281 aaagcccggc agcatgagct gaggctttgc ccgttttgca ggcgttacgc ctgtttgggg
    35341 atgggcgtgt cgatgagtgt cgaaaatgac atttcatcgg catgttttcg tcaaaaatga
    35401 caatcacctg aggaatgcct ggtgaatcgt tttgtaattg ctgactccac gctctgtatc
    35461 ggctgccaca cttgtgaggc agcctgttca gagacgcatc gccagcacgg cctgcaatca
    35521 atgccgcgcc tgagagtgat gctgaatgaa aaagaatctg cgccgcagct ctgtcaccac
    35581 tgtgaagatg caccctgcgc ggtggtctgc ccggttaacg tcatcacccg cgttgatggg
    35641 gccgtgcagt tgaatgaaag cctgtgcgta agctgcaagc tgtgcggcat cgcctgcccg
    35701 tttggcgcaa ttgaattttc cggcagccgt ccgctggata ttcctgcaaa tgccaatacc
    35761 ccgaaagcgc caccggcacc gcctgctccg gcgcgtatca gtacgctgct tgactgggtg
    35821 ccgggtattc gcgcgatcgc cgtcaaatgt gacctttgta gctttgatga acaaggtccg
    35881 gcctgcgtgc ggatgtgccc gaccaaagcc ctgcatctgg tggataacac cgatatcgcc
    35941 cgcgtcagca aacgtaagcg tgagctgact tttaatacgg actttggcga tctcaccttg
    36001 tttcagcagg ctcaaagtgg agaggctaaa tgagcgcaat ttccctgatc aatagcggcg
    36061 tggtgtggtt tgtcgccgcc gctgttctgg catttctctt ttcttttcaa aagacgctaa
    36121 gtggctggat agccggaatt ggcggcgcgg ttggtagcct gtatacggca gccgcgggct
    36181 tcactgtgct gactggcgcg gttggcgtga gcggtgcgct gtcgctggta agctacgatg
    36241 tgcaaatctc cccgcttaac gcgatttggc tgattacgct cggtctgtgc ggtctgtttg
    36301 tcagcctcta caacattgac tggcatcgcc acgcgcaggt gaagtgcaac ggcttgcaga
    36361 tcaatatgtt gatggctgct gccgtctgcg ccgtcatcgc cagcaacctc ggcatgttcg
    36421 tggtaatggc cgaagtcatg gccttgtgtg cggtgttcct caccagcaac agcaaagagg
    36481 gcaaactgtg gtttgcgctg gggcgtcttg gcactctgct gctggcgatt gcttgctggc
    36541 tgctgtggca gcgttatggc acgctggatc tgcgcctgct ggatatgcgt atgcaacagc
    36601 tgccgctcgg ttccgatatc tggctgctcg gtgtgattgg ctttggcctg ctcgccggga
    36661 ttattccgct gcacggctgg gtgccgcagg cacatgctaa cgcctctgcg ccagctgccg
    36721 cgttgttttc tacggtagtc atgaaaattg gcctgctggg cattttaatc ctgtcactgc
    36781 tgggcggtaa tgcaccgctg tggtggggga tcgtgctgct ggtgctcggc atgatcaccg
    36841 cgtttgtcgg tggtctgtat gcgctgatgg agcacaacat ccagcgcctg ctggcttacc
    36901 acaccctgga aaatatcggc attatcctgc tggggctggg cgctggcgta acgggtatcg
    36961 cgctcgaaca accggcgctg attgctcttg gcctggtcgg tggtctgtac catctgctta
    37021 accatagcct gttcaaaagc gtactgttcc tcggggcggg gagcgtctgg ttccgtaccg
    37081 gtcatcgcga tatcgaaaaa ctcggtggta ttggcaagaa aatgccggtt atctccatcg
    37141 ccatgttagt cgggttgatg gcaatggctg cgctgccgcc gctgaacggg tttgccgggg
    37201 aatgggttat ctatcaatcc tttttcaaac tgagcaatag tggcgcgttt gttgcccgtc
    37261 tgctggggcc gctgctcgct gtgggtctgg caattaccgg tgcgctggcg gtgatgtgta
    37321 tggcgaaagt ctatggcgtc acgttcctcg gcgcgccgcg taccaaagaa gccgaaaacg
    37381 ccacctgtgc gccgctcctg atgagcgtaa gcgtagtggc actggcgatt tgctgcgtaa
    37441 ttggcggtgt tgctgcgccg tggctgctgc cgatgctctc tgctgccgta cctctgcctc
    37501 tggagcctgc taacaccacc gtttctcaac caatgatcac attgctgctg attgcctgcc
    37561 cgctgctgcc attcatcatt atggcgattt gcaaaggcga ccgcctgccg tcacgttccc
    37621 gcggtgcggc ctgggtgtgc ggctacgacc atgaaaaatc aatggtgatt accgctcacg
    37681 gttttgccat gccggttaaa caggcgtttg cgccagtgct gaaactgcgc aaatggctga
    37741 atccggtgtc gctggtgccg ggctggcagt gcgaaggtag tgcgttgctg ttccgccgga
    37801 tggcgctggt tgaactggcg gtactggtgg tgattattgt ttcacgagga gcctgagaat
    37861 gagtgtttta tatccgttaa ttcaggcgct ggtgttattt gccgttgcgc cgctgctctc
    37921 cggtattacc cgcgtggcgc gcgcccgtct gcataaccgt cgcgggccgg gcgtgttgca
    37981 ggagtatcgc gacattatca aactgctggg ccgccagagc gttggcccgg atgcctctgg
    38041 ctgggtgttc cgcctgacgc cgtatgtgat ggtgggcgtc atgctgacta tcgctactgc
    38101 gctgccggtg gtgaccgtcg gttctccgct gccgcaactg ggcgatttga tcaccttact
    38161 gtatctcttc gccatcgcgc gtttcttctt tgccatttcc ggtctggata ccggtagccc
    38221 gtttaccgct atcggtgcga gccgtgaagc gatgcttggc gtgctggtcg aaccgatgtt
    38281 gctgcttggt ctgtgggttg ccgcacaggt tgccggttcc accaacatca gcaacattac
    38341 cgacaccgtt tatcactggc cgctgagcca aagcatcccg ctggtgctgg cgctctgcgc
    38401 ctgtgcgttc gccactttta tcgaaatggg caaactgccg ttcgacctgg cggaagccga
    38461 gcaggagttg caggaaggtc cgctctctga gtatagcggc agcggctttg gcgtcatgaa
    38521 atggggtatc agcctgaaac agctggtggt gttgcagatg ttcgtcgggg tgtttattcc
    38581 gtggggacaa atggaaacct tcaccgccgg tggactgctg ctggcgctgg tgattgcgat
    38641 cgtaaaactg gtggtcggcg tcctggttat cgcgctgttc gaaaacagca tggcccgtct
    38701 gcgtcttgat attacttcgc gcattacctg ggctgggttt ggctttgcat ttttagcgtt
    38761 cgtctccttg ctggcggcgt gattaaagag agtttgagca tgtctgaaga aaaattaggt
    38821 caacattatc tcgccgcgct gaatgaggca tttccgggcg tcgtgctgga ccacgcctgg
    38881 cagaccaaag agcagctgac tgtcaccgta aaggtgaact atctgccgga agtggtggag
    38941 tttctctact acaagcaggg gggctggctg tcggtgcttt ttggtaacga cgaacgcaaa
    39001 ctgaatggtc attacgccgt ttattacgtg ctgtcgatgg agaaggggac taagtgctgg
    39061 gtaacggttc gcgtcgaagt tgatgccaac aaaccggagt atccgtccgt gacgccgcgc
    39121 gttccggcgg cggtgtgggg cgagcgcgaa gtgcgcgata tgtacggttt gattccggtt
    39181 ggtctgccgg atgaacgccg tctggtgctg ccggatgact ggccggatga actttatccg
    39241 ctgcgtaaag acagcatgga ttatcgtcag cgtccggcac cgaccaccga tgctgaaacc
    39301 tacgagttca tcaacgaact gggcgacaag aaaaacaacg tcgtgccgat tggtccgctg
    39361 cacgtcactt ctgacgaacc gggccacttc cgtctgttcg tcgatggcga aaacattatc
    39421 gacgcagact accgcttgtt ctatgtccat cgcggtatgg aaaaactggc ggaaacccgc
    39481 atgggttata acgaagtgac cttcctctct gaccgtgtgt gcgggatctg cggcttcgcc
    39541 cacagcaccg cctacaccac gtcggtggaa aacgcgatgg gtattcaggt gccagaacgt
    39601 gcgcagatga tccgcgccat tctgctggag gtggaacgcc tgcactcgca tctgctcaac
    39661 ctcggcctcg cctgccactt taccagcttc gactccggct ttatgcaatt cttccgcgtg
    39721 cgtgaaacct ccatgaaaat ggccgagatc ctcaccggtg cgcgtaaaac ctacggcctg
    39781 aacctgatcg gcgggattcg tcgcgatctg ttgaaagatg acatgatcca gacccgccag
    39841 ctggcgcaac agatgcgtcg tgaagtgcag gagctggtgg atgtgctgct gagcacaccg
    39901 aacatggaac agcgcaccgt cggcattggt cgtctggacc cggaaattgc ccgcgatttc
    39961 agtaacgttg gcccgatggt ccgcgccagc ggacacgctc gcgatacccg cgctgatcac
    40021 ccgtttgttg gttatggcct gctgccaatg gaagtccaca gcgagcaggg ctgcgacgtt
    40081 atttcgcgtc tgaaagtgcg tatcaacgaa gtctataccg cgctgaacat gatcgactac
    40141 ggtctggata acctgccggg tggcccgctg atggtggaag gctttaccta cattccgcac
    40201 cgtttcgcgc tgggctttgc cgaagcgccg cgcggtgatg atatccactg gagcatgact
    40261 ggcgacaacc agaagctgta ccgctggcgc tgccgtgccg cgacctacgc gaactggccg
    40321 accctgcgct acatgctgcg tggcaacact gtttccgatg cgccgctgat tatcggtagc
    40381 ctggaccctt gctactcctg taccgaccgc atgactgtgg tcgatgtacg taagaagaag
    40441 agcaaagtgg tgccgtacaa agaactcgag cgctacagca ttgagcgtaa aaactcgccg
    40501 ctgaaataag gaatcgccat gtttaccttt atcaaaaaag ttatcaaaac cggtacggcg
    40561 acctcgtctt atccgctgga gccgattgcg gttgataaaa acttccgtgg taagccagag
    40621 cagaacccgc agcagtgcat cggctgcgcg gcctgcgtca atgcctgccc gtcaaacgcc
    40681 ttaacggttg aaactgacct cgccacagga gagctggcct gggagtttaa tctcgggcgc
    40741 tgcatcttct gtggacgctg cgaagaagtt tgcccgacgg cggcgattaa gctgtcgcaa
    40801 gagtacgaac tggcggtgtg gaagaaagaa gacttcctgc aacagtctcg cttcgcgctg
    40861 tgcaactgtc gcgtctgcaa tcgtcctttc gccgtccaga aagagatcga ctacgccatt
    40921 gcgctgctta agcacaacgg cgacagccgc gcggaaaacc accgcgaaag ctttgagact
    40981 tgcccggaat gtaagcgcca gaaatgcctg gtgccgtccg accgtattga actgactcgc
    41041 catatgaaag aggccatctg atgagcaatt tattaggccc ccgtgacgcc aacggcattc
    41101 cggtcccgat gacggtggat gaatccatcg ccagcatgaa ggcgtcgtta ctgaaaaaaa
    41161 tcaaacgttc tgcctatgtt taccgcgtgg actgcggcgg ctgcaacggc tgcgaaatcg
    41221 aaattttcgc cactttatcg ccgctgtttg atgcagaacg cttcggcatt aaagtcgttc
    41281 cttcaccgcg tcatgcggat attttactgt ttaccggcgc ggtcacccgt gcaatgcgat
    41341 cccctgcgct gcgtgcgtgg cagtccgcgc cggacccgaa aatttgtatc tcctacggtg
    41401 cctgcggtaa cagcggcggg atcttccacg atctctactg cgtgtggggc ggtacggata
    41461 aaattgtccc tgtggatgtt tatatccctg gctgcccgcc aacgcctgcc gccacgctgt
    41521 acggctttgc aatggcgctc ggcctgctgg agcagaaaat tcacgcccgt gggccgggtg
    41581 aactggatga acaaccggcg gagatcctgc atggcgatat ggtgcagccg ctgcgcgtga
    41641 aagtggatcg cgaagcacgc cgcctggcgg gttatcgtta cggtcgtcag attgccgatg
    41701 acttcctgac acagttaggg cagggcgaag aacaggttgc acgctggctg gaagcggaaa
    41761 acgatccgcg tctgaacgag attgtcagcc atctgaatca tgttgtagaa gaggtgcgta
    41821 tccgatgagt gaaaaggtgg tgttcagtca actgagccgt aaatttattg atgagaacga
    41881 tgccacgccc gccgaggcgc agcaggtggt ctattacagc ctggcgattg gtcaccacct
    41941 tggggttatc gattgcctgg aagcggcgct cacctgcccg tgggatgaat atctggcatg
    42001 gattgccact ctggaggcgg gcagtgaagc ccgccgcaaa atggaaggcg taccgaagta
    42061 cggtgagatc gtcatcgaca ttaaccatgt gccgatgctg gccaacgcat tcgataaagc
    42121 ccgggcagcg caaacttcgc agcagcagga atggagtaca atgctgttaa gtatgctgca
    42181 tgatattcat caggaaaacg ccatctattt gatggtgagg agattgcgtg actgacgttt
    42241 tactctgtgt tggcaatagc atgatgggcg atgatggcgc aggtccgctg ctggcggaaa
    42301 agtgcgccgc cgcgccgaaa ggtaactggg tggtgattga cggcggtagt gcaccggaaa
    42361 acgacatcgt cgccatccgt gaactgcgcc ctacgcggtt actgattgtc gacgccacgg
    42421 atatggggct aaaccccggc gagatccgca tcatcgaccc ggatgatatc gccgagatgt
    42481 ttatgatgac tacccataac atgcctctga actatcttat cgaccagttg aaagaagata
    42541 ttggcgaagt gattttcctc ggcatacagc cggatatcgt cggcttttac tacccgatga
    42601 cccagccgat taaagatgcg gtagaaaccg tttatcaacg actggaaggc tgggaaggga
    42661 atggcggctt cgcgcagtta gcggtggaag aagagtagtt tttcattaag aaatcaggac
    42721 agggatgttc ttgatggggt gaaccagctc tgatgccaaa tgctaaattg cccgatgcgc
    42781 tgcgcttatc gggccttcct ggttcgtgcg acatgtaggc cggataaggc gttcacgccg
    42841 catccggcac tgttacttac tctaaatctt ccccattact ggcaatcact tttttatacc
    42901 accagaacga tttcttacgt gtgcgcgtca gcgtgccgtt gcctgcgtcg tcacggtcta
    42961 cgtagacaaa accgtagcgt ttgctcattt cacccgtaga ggcggaaact aaatcaatac
    43021 agccccatgt ggtgtagccc atcagcggaa tgccatctgc aatcgcttcg cccattgcgc
    43081 ggatatgttc gcgtaaatag ctgatgcgat agtcatcgtt aatctcgcca ttggcagcaa
    43141 gttcatcttt tgcgccgagg ccgttttcca ccagaaacag cggcttctga taacgatcgt
    43201 acatcatatt catggtgata cgcagaccga gtggatcaat tccccagccc cagtcgctca
    43261 cttgcagata cgggttacgc agcgatttca ccacgttcgc cgcactgctg ttgttggcgt
    43321 tcatctccgc cgaggcgcag cgcgaggcgt aatagctgaa agagacaaaa tcgacggtgt
    43381 ttttcaggat ctcatcatcg cccagcgctt tatctatggt tacccctttt tcgcgaaata
    43441 cgcgggcaga gtaagccgga tacgcgccgc gcgcctgcac atcgataaaa aacaggtttt
    43501 cccgatcttt ctccagcgcc gcccagacat cttccggttt gcagctgtaa gggtagaagt
    43561 tgccgcccgc cagcatacag cccacctgat tttgcgggtt aacctcatgg gcgattttgg
    43621 cggctagcgc actggcaacc agctggtgat gcgcggcctg atatttcacc tgatcctgat
    43681 tttcaccgtc ttcaaacacc agacccgcgc cggagaacgg gctatgcaac ataatgttga
    43741 tttcattgaa ggttagccag tatttcacca gaccatcaaa tgcttcaaag caggttctgg
    43801 cgtagcggct gaaaaactcc accagcttgc ggttacgcca ggagccatat tcggtgacca
    43861 gatgcatcgg cacatcgaag tggcacaacg tgaccagcgg ttcgataccg tactttttac
    43921 actcttcaaa gacagaacga taaaaagcaa tgccctgctg attgggcgtg atttcatcgc
    43981 cctgcggaaa gagacggctc caggcaattg aggtacggaa aaccttgaat cccatctctg
    44041 ccatcagggc gatatcttct ttataacgat gataaaaatc cgtcgcctca tggctgggat
    44101 aaaactcgtc atcgcgcaac tgaaaacgtt tttccagccc cagtttcacc gccattcgat
    44161 gctcgccgtg tgggatcata tcgacggtgg tcagcccttt tccgccttca cggaacgcac
    44221 cttcagactg gttggcggca agcgcgccgc cccataaaaa accttctgga aatactgaca
    44281 ttttcatcct caattaagac ttacttcttt ggcgacggtc ggttgtacgc tctgatgctt
    44341 tcgcgcctgg gcagccgctt cctcaacagg aatatcctca aagccgagca acagtgtgag
    44401 gataaacgac agcaccaccg ccagcgccat gaccgcgaac acccagacga tgctcattgg
    44461 attcgccgga tcgaagaatt gcacgctggt aaatagcccc ggcgctgcca ttgagtggct
    44521 ggcaagcccc gccataccgg caaccgcgcc gcaaataaaa ccgctgataa gactggcgat
    44581 aagcggacgt ttcaggcgga tcgccacgcc gtataacgcc ggttcggaaa tccccgccat
    44641 aatggctgat gccgccgcag ccagcgccgt ctggcgcagt tccgggtttt tcgttttcca
    44701 cgccaccgcc agtgatgaac cgcccagcga caggttagcg ccgatctctg acggcatgac
    44761 catcccttct ttgccggttt cggcaatggt ctgaatgatg gttggcgtaa agacgcggtg
    44821 catcccggtc attaccagca gaggccacag cgcgcccata atggcgactg aaagccagcc
    44881 cagataacca tgaatgctgt aaaccagcgc cgaaatggcg ctaccgatcc agataccaat
    44941 cgggccaatc agcaggattg ccagcggtgc ggcaatcaac acaatcagca ttggcttgag
    45001 gaagtttttg gtcaccgccg gtgtaatgcg atccacccag cgttcgatat atgacaggca
    45061 ccaggtcatc accagcgccg ggatcactgt gtaggtgtat ttcaccgcgg tgaccggaat
    45121 cagggcaaat tcgacatgtt caccctgggc cgctttcgcc atcagttcaa taaaactcgg
    45181 atgtaccagc acacccgcga tggcaatcgc cagcgacata ttggttttaa atttgatggc
    45241 ggcagatgcc gcgaccatca gcggcaggaa gaagaaagca ccgtcaccaa tcacattcag
    45301 aatggttaag gtcggcgatc cttttgtcag cacgccgctc atctcgagga tcatcgccag
    45361 cagtttgacc atcgatccgc cgataatcgc cgggatcagc ggtgacatgg tgccgatcag
    45421 cgcatcgagg atccccgcac caatgcgacg cggcgtgagt ttgggtttac ccacgggctg
    45481 tgcgggctgc atatctcccg gcagcaggct gacgacttcc tgaaaggctt gtgaaacggt
    45541 attgccgata atcacctgac actggttgtc actacgtacc acgccgagca cgccggggat
    45601 ggtttttaac gtcgggctgt cgataagctg gtcatctttg ataacaaagc gcaaacgcgt
    45661 catacagtgc gtgaccgccg agatgttatc aacgccgccc agtgccgcta tctccgagcg
    45721 tgccagcgcc gcataatttt tggccatcgg attttatcct gttatcagta gggtagatgt
    45781 agttgttatc agtcgacgta acggaaaaat gccgatgctg aaacggaatt aggaaaccgg
    45841 tttcacaaaa tcatgaatag ttgtcactaa ataagcaaga gagttaatta ttcatttttt
    45901 atatttgtga aaccggtcac ctgaatattt ttcccgccga ttgcgcaagg acaatcggca
    45961 aacggtgcag tacactgcgt tgattgcgtg taaagggatg aaaatgatga cgacgatgct
    46021 ggaagtggcg aagcgcgccg gggtttcaaa agcgaccgtt tcccgcgtgc tttcaggtaa
    46081 tggctacgtc agccaggaga ctaaagatcg cgtgtttcag gcggtagaag agagcggtta
    46141 ccgcccaaac ttgctggcgc gcaatctgtc ggcgaagagt actcagacgc tggggctggt
    46201 agtgaccaac acgctttacc acggcattta ttttagtgaa ttactctttc atgccgcgcg
    46261 aatggcggaa gagaaagggc ggcagttgct attggcagat ggtaaacaca gcgccgaaga
    46321 agagcgccag gcgattcagt atctgctgga tttgcgctgc gacgccatta tgatttaccc
    46381 gcgtttttta agcgtggatg agatcgatga catcattgac gcgcacagtc agccgataat
    46441 ggtgcttaat cgccgcctgc gcaaaaacag cagccatagc gtctggtgcg atcataaaca
    46501 gaccagcttt aatgccgtgg cagagttgat aaacgccgga catcaggaga ttgctttcct
    46561 taccggctcg atggattccc ccaccagcat tgaacgtctt gctgggtata aagacgcgct
    46621 ggcgcagcat ggtattgcgc tcaatgaaaa acttatcgct aacggtaaat ggacgcccgc
    46681 cagcggggcc gaaggggtag aaacgttgct cgaacgtggg gctaaattta gcgcgttagt
    46741 tgccagtaac gacgatatgg cgataggtgc gatgaaagcg ttgcacgagc gcggcgtagc
    46801 ggtgccagag caggtgtcag ttatcggatt cgatgatatc gcaattgccc cctatatcgt
    46861 tccggcgctc tccagcgtaa aaattccggt gactgagatg attcaggaaa ttattggacg
    46921 gctgattttt atgctcgatg gcggggattt ctcaccgccg aaaaccttca gcggaaaact
    46981 gatccaccgc gactcactca ttgctctttc gcgataaaca ttgtcatcac atgtcatcgt
    47041 cactagtgtc gatgacatct tttttcctgc attacagaaa ttaatttcct taaataacag
    47101 tgaattaaaa actggcatga tttgtgaatg tatcggcgca ttaactgtca ttgctggaga
    47161 atttgatgaa ccgtttcatc attgctgacg cgagtaaatg tattggttgc cgtacctgtg
    47221 aagtggcgtg cgtggtttct catcaggaaa atcaggactg tgcatcgctg accccggaaa
    47281 catttttacc gcgtatccat gtcattaaag gtgtgaacat ttccacggcg acagtttgcc
    47341 gtcagtgtga agatgcaccg tgcgctaacg tctgcccgaa tggtgctatc agccgtgata
    47401 aagggtttgt tcatgtgatg caggaacgtt gcattggttg caaaacctgc gttgtggctt
    47461 gcccgtatgg cgcgatggaa gtggtggtac gtccggtgat tcgcaacagc ggcgcggggc
    47521 tgaatgtacg ggctgacaaa gccgaagcca ataaatgtga cctgtgcaac catcgtgaag
    47581 acggcccggc gtgtatggcg gcttgcccga ctcatgcgct gatttgtgtc gatcgtaata
    47641 aacttgaaca actgagtgca gaaaaacgcc gccgtacggc gctgatgttc taaaaatctt
    47701 acagaactgt tctggcatca aaggaattcc cggaaatatt cgtagaatac ggagcgggcg
    47761 gtatcgccga cctgtgactg ccggatgcga cgctgtcgtg tccggctggg cgggttacgc
    47821 aattcatgat ggcgggaata actcaatggc aaaaaacaca tcttgcggtg tccaactgcg
    47881 tattcgtggc aaagtgcagg gcgtcggttt tcgtccgttt gtctggcagc tggcacagca
    47941 attaaatctt cacggcgatg tctgtaatga cggcgatggc gtagaagtcc ggctgcggga
    48001 agacccggaa acgtttcttg ttcaattgca tcagcactgc ccgccgctgg cgcgtattga
    48061 tagcgtcgag cgtgagccgt acatctggtc acaactgccc actgagttca ccatccgcca
    48121 gagcgcggga ggtgccatga atacgcaaat tgtcccggat gccgctactt gccctgcttg
    48181 ccttgccgaa atgaataccc caggcgaacg gcgttatcgt tatccgttta tcaactgtac
    48241 ccactgcggc ccgcgtttca ccattattcg cgccatgcct tacgaccgcc cgtttaccgt
    48301 gatggcggcg tttccgttgt gtccggcttg tgacaaagag taccgcgacc cgctcgatcg
    48361 tcgcttccac gcccagccgg tggcctgccc ggagtgtggc ccgcatcttg aatgggtaag
    48421 tcatggtgaa catgcagaac aagaggcggc attacaggcg gctatcgcac agttaaaaat
    48481 gggcaacatt gtcgccatca aagggattgg cggatttcat cttgcctgcg atgcacgtaa
    48541 cagtaacgcg gtggcgacac ttcgggcgcg caaacatcgc ccggcgaaac cgctggcggt
    48601 catgttgcca gtggctgacg gtttaccaga cgctgcgcgc cagttgctta ccacgcccgc
    48661 cgcgccgatt gtgctggtgg ataaaaaata cgttcctgag ctttgtgatg atatcgcccc
    48721 tgaccttaac gaagtcgggg taatgttgcc tgcgaacccg ctccagcatt tgctgttaca
    48781 ggaactgcaa tgcccgctgg tgatgacctc cggcaacctg agcggtaaac caccagctat
    48841 cagcaacgaa caggcgctgg cggatttgca gggcattgcc gacggattct tgatacataa
    48901 ccgcgacatc gtgcagcgga tggatgattc ggtggtgcgc gaaagcggcg aaatgctgcg
    48961 ccgttcgcgg gggtatgtgc cggatgcgct ggctttgcct ccgggcttta aaaatgttcc
    49021 gcctgtgctg tgtctcggag cggatctgaa aaataccttc tgcctggtgc gcggtgaaca
    49081 agcggtgttg agtcagcatc tgggcgattt aagtgacgat ggcatccaga tgcagtggcg
    49141 cgaagcgtta cgcctgatgc aaaacatcta cgattttacc ccgaaatacg ttgtgcatga
    49201 cgcgcatccg ggctatgtct ccagccagtg ggcgcgtgaa atgaatctgc cgacgcaaac
    49261 ggtactgcat catcatgccc atgcagcggc gtgtctggca gagcatcagt ggccgctgga
    49321 tggcggtgat gtcattgctt tgacgctcga cggtatcggt atgggggaga acggcgcttt
    49381 gtggggcggc gagtgcctgc gggtgaacta tcgcgaatgt gagcacctgg gcggcttgcc
    49441 tgcagtggcg cttccgggtg gcgatttggc agcgaagcag ccgtggcgaa acctgctggc
    49501 gcagtgcctg cgctttgtgc cggagtggca gaattaccct gaaacagcaa gtgtgcaaca
    49561 gcaaaactgg agcgtgctgg cgcgggccat tgagcgtgga attaacgcgc cgctggcgtc
    49621 atcgtgtggg cggttgttcg atgcagtggc ggcggcactg ggctgtgcgc cagccacgtt
    49681 aagttatgaa ggtgaagcgg cttgtgctct ggaggcgctc gcagcctcat gccacggagt
    49741 gacgcatccg gtgacgatgc cgctggtgga caatcaactg gatctcgccg ctttctggca
    49801 gcagtggctg aactggcagg cacaggttaa tcaacgcgcg tgggcgtttc atgatgcgct
    49861 ggcgcagggt tttgccgcgt tgatgcgtga gcaggccacg atgcgtggta tcactacgct
    49921 ggtatttagc ggcggggtta ttcataaccg tttgctgcgt gcacgtctgg cgcattatct
    49981 cgctgatttc acattgctct ttccacagag tttaccggcg ggtgatggcg gtttgtctct
    50041 ggggcagggg gttattgctg cggcgcgttg gttagcgggt gaagtccaga acggataaaa
    50101 cgtgttgcat ttggacacca ttgccggatg cggcgtaaac gccttatccg gcctacacat
    50161 gcgtccccgt aggtcggata agacgcgcta gcgtcgcatc cgacatttta ggcacagtag
    50221 cccacctaca tcggcaatgt tttcaacaat ccaaatgcct ctttcatccg atcctcactg
    50281 accacaaagg cgcgaagctg gtcagcatcg tcaacaccgc gagccaccat tccctagcgt
    50341 tcggtattaa tttgccagcg taaatcctga cgctgggttt cgcctgccag atgcagcggt
    50401 aattccggcg ttttgatttt caccagcatc gtcggtagtt tcagcggcgt gttattgccg
    50461 agaagatttt ttgccagcac catcgcgcta agttgaatcg gctgcaggaa tggcagtacc
    50521 tgaccgttga tttccgcgta atcgcccagc gcataaatat cgtcattact ggtttgcaga
    50581 taactatcga cgcaaacgcc gcgattaatc gtcagcccgg cgcgtcgtgc cagggctgtt
    50641 tccgggcgca gtccggtggc ggcaattacc gcatccactt cgatactacg ctggtggtcc
    50701 agcgttgcca gaatgccaga atccgttttt tccagcccct gtaactgaga tttcaacagc
    50761 agatgaacgc ccatctccgt caaccgatgc tgcaagcggc tgcttacttc cggtggcatt
    50821 aacgacgcca gaatactggc agcgttgtcg attagcgtga ccgctttgcc tgcacgacaa
    50881 aaatccatcg ccagttcgct accaatcaaa ccaccgccaa caatcaacac gcgtcgggca
    50941 tcccgcagtt gcgtttcaca ggcgcgatac tcttgctgac tatttaacgt cagcattaac
    51001 tcacgcccag gcacaggcgg gacaaaggca ctggcaccgg ttgccagtac tagcttgtcg
    51061 tattgccact gattattctg gcttttcacc acacgggctt cggcatcgat atccgtcacc
    51121 caggtttgtg gaaacaggtg cagattaaac tgctcggcaa attcacccgc cgtctggcgg
    51181 gtaaggtcat cggcacgttg cccctgactg ataacatggc tgaggtcagg tttgttgtac
    51241 tcatccatgc tgtcggcggc aatcagggtt aatggaatag tggcgtcctg tttgcgaata
    51301 tttttcacca gttggcgggc ggcgaagccc gaaccgatga tcacaatgcc gttactcatt
    51361 ttgcctccga tgccagttct tcaaagacgt ctttgccgag ggagcattcc gggcagagga
    51421 agttatccgg gacttcactc cacggcgttc ctggcgcaac gtcctgcatt ggctcgcctt
    51481 ttgccggatc gtaaatccac tggcagacgc tgcactgcat ccgtgggccg aggtcagccg
    51541 tcgtggtggc agaggtttct tctttgacta ccttattcac cgtgctctgc ggcagcggcg
    51601 cgagcgccca ctgacgggcg atttcgcgac cgtgttcacg gcataactcc agagcgtcct
    51661 ggtctggtcg ccatttcgct ttcaggctaa gcgacatttc gaaacccgca tcctgcaggc
    51721 gcgtggaaag acgatccacc gcaccgccgc tccagccgtg agagccgaaa gcactggcgc
    51781 gtttgttacg gaagcgtaaa ccagtcatct cctccaccag cccggcgatt ttcggcatca
    51841 tcacgttatt catcgtcgaa gtgccgacca gcacgccttt tgagcggaag acattggtca
    51901 ggatttcgtt tttatcgctt cgggcgacgt tgaaaatttt caccgccacg cgtgggtcgg
    51961 tttccgcaat cccctgggcg atagcgtcag ccatcatgcg ggtgttattc gacatggtgt
    52021 cgtagaaaat ggtgattctg tcttcctgat aatcagccgc ccatttcagg tacagctcga
    52081 caatttgcgt cgggttatcg cgccatacca cgccgtgaga ggtcgctatc atatcgactg
    52141 gtaagttaaa gcccaggatc tcggtaattt tcggtgttac caggcggctg aacggcgtca
    52201 ggatattggc gtagtaacgc tggcactgct cgaaaagctc cgtctgatcc acttcatcgt
    52261 tgaacagatg ctcgtcgcag tagtgctgac cgaaagcatc gttactgaac agcaccgcgt
    52321 cgcctgtcag gtaagtcatc atgctgtccg gccagtgcag cattggcgtt tcgacaaaaa
    52381 tgagctgttt gccgttgccg atatccagcg tgtcaccagt tttcaccaca ttaaaattcc
    52441 actccggatg atggtgatga ccatttatcg agtcgatagc gttggcagta cagtaaatcg
    52501 gcgtatcggg aatttgcgcc atcagttcgg tcagcgcccc agcgtggtcc tcttctgcat
    52561 ggttaatcac gatgtaatcg atatccgcca gatcgatttc attacgcagg ttctgcacaa
    52621 attcgcggct gaatttatgg tcgacggtgt cgatcagcac gtttttttct tcgcggatga
    52681 ggtagctgtt gtaactgctg ccgcgcagcg ttttatattc cgtaccgtga aaatcacgca
    52741 cttcccagtc acgttgacca acccaatgaa tgttattttt caccacaata gacatagcaa
    52801 cctcaattta ttcagcgtgt tctaaaaaga tgtcttgcta attgcagatt acgtgccagt
    52861 tttttatctg attgttttta ctctataaat aaaattatgc tcattaatga gtagtcaaaa
    52921 tgactatcaa tcaaatggtc gatatgacaa tatctatagt caaattgaca gtgaggcaaa
    52981 gatgagtttt tccgttgatg tgctggcgaa tatcgccatc gaattgcagc gtgggattgg
    53041 tcatcaggat cgttttcagc gcctgatcac cacgctacgt caggtgctgg agtgcgatgc
    53101 gtctgcgttg ctacgttacg attcgcggca gtttattccg cttgccatcg acggtctggc
    53161 aaagggtgta ctcggtagac gctttgcgct ggaagggcat ccacggctgg aagcgattgc
    53221 ccgcgccggg gatgtggtgc gctttcccgc agacagcgaa ttgcccgatc cctatgacgg
    53281 tttgattcct gggcaggaga gtctgaaggt tcacgcctgc gttggtctgc cattgtttgc
    53341 cgggcaaaac ctgatcggcg cactgacgct cgacgggatg cagcccgatc agttcgatgt
    53401 tttcagcgac gaagagctac ggctgattgc tgcgctggcg gcgggagcgt taagcaatgc
    53461 gttgctgatt gaacaactgg aaagccagaa tatgatgcca ggcgatgcca cgccgtttga
    53521 agcggtgaaa cagacgcaga tgattggctt gtcccctggc atgacgcaac tgaaaaaaga
    53581 gattgagatt gtggcggcgt ccgatctcaa cgtcctgatc agcggtgaga cgggaaccgg
    53641 taaggagctg gtggcgaaag cgattcatga agcctcgcca cgggcggtga atccgctggt
    53701 ctatctcaac tgtgctgcac tgccggaaag tgtggcggaa agtgagttgt tcgggcatgt
    53761 gaaaggagcg tttactggcg ctatcagtaa ccgcagcggg aagtttgaaa tggcggataa
    53821 cggcactctg tttctggatg agatcggcga gttgtcgttg gcattgcagg ccaagctgct
    53881 gagggtgttg cagtatggcg atattcagcg cgttggcgat gaccgtagtt tgcgggtcga
    53941 tgtgcgcgtg ctggcggcga ctaaccgcga cttacgcgaa gaggtgctgg cagggcgatt
    54001 tcgcgctgac ttgtttcatc gcctgagcgt gtttccactt tcggtgccgc cgctgcgtga
    54061 gcggggcgat gatgtcattc tgctggcggg gtatttctgc gaacagtgtc gtttgcggct
    54121 ggggctctcc cgcgtggtat taagtgccgg agcgcgaaat ttactgcaac actatcgttt
    54181 tccggggaac gtgcgcgaac tggaacatgc tattcatcgg gcggtagtgc tggcgagagc
    54241 cacccgcaac ggcgatgaag tgattcttga ggcgcaacat tttgcttttc ctgaggtgac
    54301 gttgccgccg ccagaagcgg cggcggtgcc cgttgttaag caaaacctgc gtgaagcgac
    54361 agaagcgttc cagcgtgaaa ctattcgcca ggcactggca caaaatcatc ataactgggc
    54421 tgcctgcgcg cggatgctgg aaaccgacgt cgccaacctg catcggctgg cgaaacgtct
    54481 gggaatgaag gattaaataa tcccggcctg atagaaatcc tgcaggttaa ttgcgccggt
    54541 gagtttgccg ttttcatcca ccaccggtgc ggcagtgatt ttgcgcttca tcaggatctc
    54601 tttggcgtcg atggcgcgac tttgcgcctg taacgtggtg ccgcctgtcg tcatcgcttc
    54661 attaactggc gtggtgagtg cgccgccgcc taccagccag cgacgtaaat cgccgtcggt
    54721 aaagacgcct tgtacctgtt gttgagcgtc acataccgcc accagcccca gaccggtgcg
    54781 gctgagttcc agcatcgcat ccatcacgct ggcggttaac gccacctgtg ggatggcatc
    54841 gtcacggcgc atcagatgat gcactttatt cagcaagcga gcgcccagtg ccccggctgg
    54901 gtgggagcgg gcaaaatctt cttcattaaa tccgcgcgcc tgcatgaccg ccatcgccag
    54961 cgcgtcaccc atcatcaggg tattgacggt gctggaggtc ggcgcaaggt gcatcgggca
    55021 ggcttcgcgt tctacggaga tatccagcac cgcttttgcc gccaggccca gcggtgacgt
    55081 cggtttgccg gtcatcgcca gcagcgcgat agatttatct tccagacgcg gaataatcag
    55141 atccagttcc ttcgcgccac cggagtaaga gataaacagc atcacatcgc ggctttcaat
    55201 catccccaga tcgccgtgca gtgcttctgc cggatggaca aaaaaagccg gtgtgccggt
    55261 actggcaagt gttgcggcga ttttcttacc aatgtggccc gatttgccaa ttcccgaaac
    55321 caccactttg ccttcgcagt gcaggatgat attggcggcg cgaacaaaat catcgcccag
    55381 acgttccggt aaacggcttg cttcctgcaa ctccagcatt aacgtctgac gtcccgcgtt
    55441 cagtagtgct tcactcattg ctctctccgg ttatgatcac atcgatccct ttctcttcca
    55501 gcgcctgacg aaacgccgga tcgatacctg cgtcggtaat cagcttatcg acgctttcaa
    55561 gactgcaaac tacgttgggg cttttacggc caaactttga tgagtccgcc atcaaaatca
    55621 cttcgcgcgc ggcattgcac attgccttac tgacggtata aacctcgttg aaggtggtta
    55681 cgcccgcatt gagatcgatg ccgtcggtgc ccataaacaa tttatcgaaa ctgaaatgtt
    55741 cgaaggcatt ctctgccagc tgtccgtgaa atgaggccga ttttttacga aacgttccgc
    55801 ctggcatcag gatagtttgt tcgttatcca gttcggatag cgcattgacg atatgcaggc
    55861 tgttggtcat caccgtgatg ttattaaagc gcgagagcag gggaaccatc tgcaaaacgg
    55921 tactgccagc atcaagaatg atcgaatcgc catcatggat aaaactaacg gcagcttctg
    55981 caatcagctc tttcttgtgg gtgttgatga gtgttttatg atcgataggc ggatcggatt
    56041 cctctttatt caacaccact ccgccataag tacgaatgac ggttccggca tgttccagaa
    56101 tgaccagatc tttgcgaatg gttgtgcctg tggtgtcaaa gtattgcgcc aattcttcaa
    56161 ccgagcattt accctgcttt tgcagatact ccagaatggc ggcctgacgc tgacgaggtt
    56221 tcatgggcgt gattacctga tttaggtttc aaaatgataa cttcgcaagc aagtaacatt
    56281 cacaacgaaa ttatccacgt ttcagtttaa gcgccaatga tagagcattc tgtgatagtg
    56341 gatcatgggg aaagatcaca tcgggctgta aatcacccgc atgcataccg gtaattgcgg
    56401 gaattttttg cggtcgggcg aagacggtca gtcctttcat aaacaaggtg tcgacgatgc
    56461 gctgctgatc gtccagccga tggcgaccac gacccgcggt ttaaagcgcc cgctggaacg
    56521 acccacgcca acccgccctt gctggcatag tgtgtcgaag gcacggttaa aacgagaaat
    56581 ttgccagccg cctaaggcca gttgcgcaca ccaggcgata acggcgacgg tgatgagtgc
    56641 ggataccata acttttcctt aatgtagtgg cggaagtcct gtatgcctga tgagcgtagc
    56701 gcatcaggca ttctatagtc tcacggagat ccttaatgga tctccgctgt tgatcagaac
    56761 atcacctgac cgccggtgac attgatcgac tgtccggtgc agtacgacgc cttaggactg
    56821 gcgtagaaca gcagcatatt cagcacatct tgataatcgc agccgcgttt gagcggtact
    56881 ttgtcaatgt aatactgctc gacttgatcc ggtttgatac ccagcttggt cgcgtattgt
    56941 ggcaacagtg actggaacat cggcgatttc agcaggttac cgagcatcag tgaatgcacc
    57001 gtaatgccgt actccgccag atccagcgcc agtgattgag tcagcccgac gccaccaaat
    57061 ttcgctgcgc tgtagccaga gttgtgtttg ctgcccactt tgccggattt cgagttgatc
    57121 tgaataatgc gaccctgaat cccgtcgcgg atcatcaaac gcgaaaattc acgggcacac
    57181 aggaaataac ccaccagatt cacttgtagc gaacggtcaa aatcgccgag ctggaagtcg
    57241 ctgataaagg ctgcttttgc tattccggcg ctatagacca gcaaatccac gcgaccaaag
    57301 atttcatcta ccccacgaga gagcgccaga acgctttgct cgctagtggc gtcagcacca
    57361 aaaccgtacg ccatactttc accatattcg gcgttaattt cttgtgccac atttgcggct
    57421 ttgtcgctct gaatatcgac aaccgcgacg cgatacccct cggcaaccag accgtggcac
    57481 aggaacgcgc ctaaggtttg cccaccaccg atgacaacgg caacctgatt cattttttac
    57541 tccttaacag attcaaactt caaaaccgat cccggcgcga tatcgtcggg tacagggcct
    57601 gccacatgga cagtgcccgg aaattccgct tcgtttaaac catcgaagcg cagggtgaca
    57661 tgacccagtt cgcgaaggtt gtcttccgcc acgctgccaa cagcggtcac cggatagcga
    57721 tgctgcccga gcgtaaattg caaaccggga tggagtgcac ctttcaactc gccgtggcaa
    57781 tgaatgaagc aatactcttc gaggtccgct ggcgcgcctt cacgaaaggt gatgagcatc
    57841 tggtcgctga gggcgtcagt ggcactcgcg ccgatacggg tgatggtggt cttataaata
    57901 acggtcatgt ttcagcctct attgatagat aaaaccggag acaaaccagg cgatcagtac
    57961 agtcggtgcg ccggttaaaa agcggctcac cagtacagaa gggacaccga cgcgaaccgt
    58021 gtcctgacgg gcttccgcca gcgacaaacc gaccgggatg aagtcgcagg ccgcctgcgc
    58081 gttgatggca aacagtgccg gtaaagccag atgcggcgga atattgccga gaccaatctg
    58141 cacgccaatc aatacgccga taacctgtgc gataactgcg cctgggccga ggaaaggtga
    58201 aagcagtggg aaggagcaga tgagcgccag catgaccaga cccagtggat ggctcgccag
    58261 cggagcaaga ccgtgggcaa tccagtcacc aaggccagaa gccataatga tgccaatgag
    58321 cgccgagacg aatgccataa acggcagaat ggtttttaat acagtgtcga tggtgtcacg
    58381 accagattga aacagcaccg caacggcgga ccccatgccc attcccacct tcgccagtaa
    58441 accatcgctt tgttcggtga ttttcttact ggtgtcatag tcacggccca cggaagaggg
    58501 ttgtggtgtc gcatcaccca ctacagtgat gttttcttct tttacgccag agacataaat
    58561 atcttccaca atgtactgcg ccagcggacc ggacttgccc gtcgagtgga tattaatggt
    58621 gggaatacgt cgtttcggat agatgccgca gcgtaatgtg ccgccacagt cgattaccgc
    58681 gacaccaatt tccgcctccg cgggttcacc ttctttaaat ccgtcaatag cctgccagcc
    58741 agtaagttgt gccagtttgt caacaatcgc aggccgggta ccggcggtga tatagacgat
    58801 ttttttgccc ggcgtggctt ccagctcaag cgggccgccc cagccacccg ttcctttttc
    58861 gatccgaata cgcgtcatga tgttgctcct gccaggtgaa ctttttgttc aagttgaatg
    58921 cccatctttt tctcaaaaat ggcggtggtc agatcggtca cccagccgcg aaagaagttg
    58981 gtgaccagac caaccagcag atagctcaac gccagtgggc caagtggcag gttcagcgtt
    59041 gtcagaccgc tggcaatgcc aagataaaca aacagttcgc cagggttgat atggggaaag
    59101 aggccattca ttgagtggca gctataagag gccgccgcgt agtagctggg tttgtacttt
    59161 tccggcataa agcgaccctg gcttaaggtc atcggattgc aaaagacaaa cgtgccaatg
    59221 cacggtagca gcaggtaacg ggaaacaggg ttaccggcgc aacgttgagc aaaacgttca
    59281 atacgatgct gaccgataaa attaatcagt gcgttcatga taaccagcag gctaatcaac
    59341 agcggaagaa tgccggtcac catcccggta aacacctctc cgcccttttg gaacagcccg
    59401 ataaaccact ctgcaccatg agtaatggtt tctatcattg ttctctcctt caggatttat
    59461 tgttttatta ccaaacggca acctaatcta atcagattga aagatttaaa agtgttattt
    59521 taatctaaaa atgaaagata aatattttaa tttggaagtt tgagtaaaag gatagcgagg
    59581 ggaatgagtt gagttatgta aagtccgtat cgggcagtga ctaccgcttc cttgtgcggg
    59641 gcgtgatgct ttaccatact tgcccctggt tgaatctgtt aaatggaccc ctcatgttca
    59701 agcgtcgtta tgtaacattg cttccccttt ttgtgttgct tgccgcctgt agcagcaagc
    59761 caaaacctac tgagactgaa acgaccaccg gaacgccgtc tggcggcttc ctgcttgagc
    59821 cgcagcacaa tgtgatgcag atgggcggcg atttcgctaa taacccgaat gcccagcagt
    59881 tcatcgacaa aatggtgaac aaacacggtt tcgatcgtca gcagttgcag gaaattctct
    59941 cccaggcgaa gcgtctggat tcggtactgc ggctgatgga taaccaggca ccaaccacat
    60001 cggtgaaacc gccatcaggt ccgaacggcg catggctgcg ttatcgcaaa aaatttatta
    60061 cgccggacaa cgtgcagaac ggtgtggttt tctggaatca gtatgaagat gcgttgaatc
    60121 gcgcgtggca ggtgtatggc gtaccgccgg aaattatcgt cgggattatc ggcgttgaaa
    60181 cccgctgggg gcgcgtgatg gggaaaactc gcatcctcga tgcgctggca acgctgtcat
    60241 ttaactaccc acgccgcgcg gagtatttct ctggcgagct ggaaaccttc ctgctgatgg
    60301 cgcgcgacga gcaggacgat ccgctcaatc tgaaaggttc ctttgccggg gcgatgggct
    60361 acggacagtt tatgccgtcg tcttacaaac aatatgcggt agatttcagc ggcgacgggc
    60421 atatcaacct gtgggatccg gttgatgcga tcggtagcgt ggcgaactat ttcaaagcgc
    60481 acggctgggt gaaaggcgat caggtcgcgg taatggcaaa cggtcaggct ccaggcttgc
    60541 caaatggctt caaaaccagg tacagcattt cgcagcttgc cacggcaggt ttaacgccac
    60601 agcagccgct gggcaaccat caacaagcca gcctgctgcg tctggatgtc ggtaccggtt
    60661 accagtactg gtacggtctg ccgaacttct acaccattac ccgttataac cacagcaccc
    60721 attacgcaat ggcggtctgg cagttaggac aagccgtggc gctggcgcgc gtgcagtaac
    60781 tatttgcaag aggggggcgt gagcttccct ctggctaatc agcttttttc tgaatcctcc
    60841 tcgtaaaatt gcaacgccaa caccatcttc ctgacgaaag tgctatcttg tccggcataa
    60901 atttttgact gacagaggtt gtgatgactg acagtgaact gatgcagtta agtgaacagg
    60961 ttgggcaggc gctgaaagcc cgtggcgcaa ccgtaacaac tgccgagtct tgtaccggtg
    61021 gttgggtagc gaaagtgatt accgatattg ccggtagctc cgcctggttt gaacgcggat
    61081 ttgtcaccta cagtaacgaa gccaaagcgc agatgatcgg cgtacgcgaa gagacgctgg
    61141 cgcagcatgg cgcggtgagt gaacccgtcg tggtggaaat ggtgataggc gcactgaaag
    61201 cggctcgtgc tgattatgcc gtgtctatta gtggtatcgc cgggccggat ggcggcagtg
    61261 aagagaagcc tgtcggcacc gtctggtttg cttttgccac tgcccgcggt gaaggcatta
    61321 cccggcggga atgcttcagc ggcgaccgtg atgcggtgcg tcgtcaggct actgcgtatg
    61381 cattgcagac cttgtggcaa caatttctac aaaacacttg atactgtatg agcatacagt
    61441 ataattgctt caacagaaca tattgactat ccggtattac ccggcatgac aggagtaaaa
    61501 atggctatcg acgaaaacaa acagaaagcg ttggcggcag cactgggcca gattgagaaa
    61561 caatttggta aaggctccat catgcgcctg ggtgaagacc gttccatgga tgtggaaacc
    61621 atctctaccg gttcgctttc actggatatc gcgcttgggg caggtggtct gccgatgggc
    61681 cgtatcgtcg aaatctacgg accggaatct tccggtaaaa ccacgctgac gctgcaggtg
    61741 atcgccgcag cgcagcgtga aggtaaaacc tgtgcgttta tcgatgctga acacgcgctg
    61801 gacccaatct acgcacgtaa actgggcgtc gatatcgaca acctgctgtg ctcccagccg
    61861 gacaccggcg agcaggcact ggaaatctgt gacgccctgg cgcgttctgg tgcagtagac
    61921 gttatcgtcg ttgactccgt ggcggcactg acgccgaaag cggaaatcga aggcgaaatc
    61981 ggcgactctc acatgggcct tgcggcacgt atgatgagcc aggcgatgcg taagctggcg
    62041 ggtaacctga agcagtccaa cacgctgctg atcttcatca accagatccg tatgaaaatt
    62101 ggtgtgatgt tcggtaaccc ggaaaccact accggtggta acgcgctgaa attctacgcc
    62161 tctgttcgtc tcgacatccg tcgtatcggc gcggtgaaag agggcgaaaa cgtggtgggt
    62221 agcgaaaccc gcgtgaaagt ggtgaagaac aaaatcgctg caccgtttaa acaggctgaa
    62281 tttcagatcc tctacggcga aggtatcaac ttctacggcg aactggttga cctgggcgta
    62341 aaagagaagc tgatcgagaa agcaggcgcg tggtacagct acaaaggtga gaagatcggt
    62401 cagggtaaag cgaatgcaac tgcctggctg aaagataacc cggaaaccgc gaaagagatc
    62461 gagaagaaag tacgtgagtt gctgctgagc aacccgaact caacgccgga tttctctgta
    62521 gatgacagcg aaggcgtagc agaaactaac gaagattttt aatcgttcgt tattgatgat
    62581 aatagataat gtgtgcacgg acggtcccct cgcccctttg gggagagggt tagggtgagg
    62641 ggaacaggcc agcactggcg tgaaaaatta ctctcacctc gatcctctaa cgaattgggc
    62701 ctgcgggaac attctgcaca ctcattgact attaaatctg tttatcagca aaacctgggt
    62761 cgcatctgcg gcccttttgc ttttttaagt tgtaaggata tgccatgaca gaatcaacgt
    62821 cccgtcgccc ggcatatgct cgcctgttgg atcgtgcggt acgcattctg gcggtgcgcg
    62881 atcacagtga gcaagaactg cgacgtaaac tcgcggcacc gattatgggc aaaaatggcc
    62941 cagaagagat tgatgctacg gcagaagatt acgagcgcgt tattgcatgg tgccatgaac
    63001 atggctatct cgatgacagc cgatttgttg cgcgctttat cgccagccgt agccgcaaag
    63061 gttatggacc tgcacgtatt cgtcaggaac tgaatcagaa aggtatttcc cgcgaagcga
    63121 cagaaaaagc gatgcgtgaa tgtgacatcg actggtgcgc actggcgcgc gatcaggcga
    63181 cgcgaaaata tgatgaacct ttgccaactg tcttttcaga aaaagttaag atccagcgtt
    63241 ttctgctcta tcgtggctat ctgatggaag atatccagga tatttggcga aattttgccg
    63301 actgaacgca tacggtattt tacttcccag tcaagaaaac ttatcttatt cccacttttc
    63361 agttaccagc ccggcggtta agacacgctg gagctggtgg cgatatttcg ttagcttgat
    63421 ttcaggataa ttatgagcaa gagcaccgct gagatccgtc aggcgtttct cgactttttc
    63481 catagtaagg gacatcaggt agttgccagc agctccctgg taccccataa cgacccaact
    63541 ttgttgttta ccaacgccgg gatgaatcag ttcaaggatg tgttccttgg gctcgacaag
    63601 cgtaattatt cccgcgctac cacttcccaa cgctgcgtgc gtgcgggtgg taaacacaac
    63661 gacctggaaa acgtcggtta caccgcgcgt caccatacct tcttcgaaat gctgggcaac
    63721 ttcagcttcg gcgactattt caaacacgat gccattcagt ttgcatggga actgctgacc
    63781 agcgaaaaat ggtttgccct gccgaaagag cgtctgtggg ttaccgtcta tgaaagcgac
    63841 gacgaagcct acgaaatctg ggaaaaagaa gtcgggatcc cgcgcgaacg tattattcgc
    63901 atcggcgata acaaaggtgc gccatacgca tctgacaact tctggcagat gggtgacact
    63961 ggtccgtgcg gcccgtgcac cgaaatcttc tacgatcacg gcgaccacat ttggggtggc
    64021 cctccgggaa gtccggaaga agacggcgac cgctacattg agatctggaa catcgtcttc
    64081 atgcagttca accgccaggc agatggcacg atggaaccgc tgccgaagcc gtctgtagat
    64141 accggtatgg gtctggagcg tattgctgcg gtgctgcaac acgttaactc taactatgac
    64201 atcgacctgt tccgcacgtt gatccaggcg gtagcgaaag tcactggcgc gaccgatctg
    64261 agcaataaat cgctgcgcgt aatcgctgac cacattcgtt cttgtgcgtt cctgatcgcg
    64321 gatggcgtaa tgccgtccaa tgaaaaccgt ggttatgtac tgcgtcgtat cattcgtcgc
    64381 gcagtgcgtc acggcaatat gctcggcgcg aaagaaacct tcttctacaa actggttggt
    64441 ccgctgatcg acgttatggg ctctgcgggt gaagacctga aacgccagca ggcgcaggtt
    64501 gagcaggtgc tgaagactga agaagagcag tttgcccgta ctctggagcg cggtctggcg
    64561 ttgctggatg aagagctggc aaaactttct ggtgatacgc tggatggtga aacggctttc
    64621 cgtctgtacg acacctatgg cttcccggtt gacctgacgg ctgatgtttg tcgtgagcgc
    64681 aacatcaaag ttgacgaagc tggttttgaa gcagcaatgg aagagcagcg tcgtcgcgcg
    64741 cgcgaagcca gcggctttgg tgccgattac aacgcaatga tccgtgttga tagtgcatct
    64801 gaatttaaag gctatgacca tctggaactg aacggcaaag tgaccgcgct gtttgttgat
    64861 ggtaaagcgg ttgatgccat caatgcaggc caggaagctg tggtcgtgct agatcaaaca
    64921 ccattctatg cggaatccgg cggtcaggtt ggtgataaag gcgaactgaa agacgctaac
    64981 ttctccttcg cggtggaaga tacgcagaaa tacggccagg cgattggtca catcggtaaa
    65041 cttgctgcgg gttctctgaa agtgggcgac gctgtgcagg ctgatgttga tgaggctcgt
    65101 cgcgcccgta ttcgtctgaa tcactccgca acgcacctga tgcacgctgc gctgcgccag
    65161 gttctgggga ctcatgtatc gcagaaaggt tcactggtta acgacaaggt gctgcgcttc
    65221 gacttctcac acaacgaagc gatgaaaccg gaagagattc gtgcggtcga agacctggtg
    65281 aacgcacaga ttcgtcgcaa tttgccgatc gaaaccaaca tcatggatct cgaagtggcg
    65341 aaagcgaaag gtgcgatggc gctgttcggc gagaagtatg atgagcgtgt acgcgtgctg
    65401 agcatgggcg atttctccac cgagctgtgt ggcggtactc acgccagccg cactggtgat
    65461 attggtctgt tccgcatcat ctctgaatcg ggtactgctg caggcgttcg tcgtatcgaa
    65521 gcggtaaccg gagaaggcgc tatcaccacc gttcatgcag acagcgatcg cttaagcgaa
    65581 gtcgcgcatc tgctgaaagg cgatagcaat aatctggcgg ataaagtgcg ctcagtactg
    65641 gaacgtacgc gtcagttaga aaaagaacta caacagctta aagaacaagc tgccgcacag
    65701 gagagcgcaa atctttccag taaggcaatt gatgttaatg gtgttaagct gttggttagc
    65761 gagcttagcg gtgttgagcc gaaaatgttg cgtaccatgg ttgacgattt aaaaaatcag
    65821 ctggggtcga caattatcgt gctggcaacg gtagccgaag gtaaggtttc tctgattgca
    65881 ggcgtatcta aggacgtcac agatcgtgtg aaagcagggg aactgattgg tatggtcgct
    65941 cagcaggtgg gcggcaaggg tggtggacgt cctgacatgg cgcaagccgg tggtacggat
    66001 gctgcggcct tacctgcagc gttagccagt gtgaaaggct gggtcagcgc gaaattgcaa
    66061 taatataagc gtcaggcaat gccgtggact cgcttcacgg cattcgcatt aacgctatcg
    66121 acaacgataa agtcaggttg aagttgtgta tatcggctaa acttaggttt aacagaatgt
    66181 aatgccatga ctgcttacat gtaatgtgtt tgtcattgct tactttttgg cgttatatga
    66241 tggataatgc cgggatacag agagacccga ctcttttaat ctttcaagga gcaaagaatg
    66301 ctgattctga ctcgtcgagt tggtgagacc ctcatgattg gggatgaggt caccgtgaca
    66361 gttttagggg tgaagggcaa ccaggtacgt attggcgtaa atgccccgaa ggaagtttct
    66421 gttcaccgtg aagagatcta ccagcgtatc caggctgaaa aatcccagca gtccagttac
    66481 taatctttcc gcgtctcatc tttatcggtg agacgcaccc tcaaaatttc tccttcactc
    66541 tatagtcttt tcgctttact cccgttcatt caacttaagt ctccattttt ttgcattact
    66601 gctatctgcc agacctccgt ttttctgtag ataaaacact ctttttgacg tttttacaga
    66661 ctaattgagc gtgaagtgtg caaacgataa aagtgtggga aaaattgttt gacttataag
    66721 tctcagaaag taatatgtgc gccacgcagc gacgatgagc gataaacaag ttcttcgaag
    66781 cactcgtaag aggcgtgtgg tgaggtggcc gagaggctga aggcgctccc ctgctaaggg
    66841 agtatgcggt caaaagctgc atccggggtt cgaatccccg cctcaccgcc at
//
LOCUS       DADKRT010000003        63705 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.003, whole genome shotgun sequence.
ACCESSION   DADKRT010000003 DADKRT010000000
VERSION     DADKRT010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 63705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63705
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.003"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            347..1690
                     /gene="argG"
                     /locus_tag="JQ356_000150"
     CDS             347..1690
                     /gene="argG"
                     /locus_tag="JQ356_000150"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HAY4620353.1"
                     /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSNDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
                     RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
                     DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGVPQVENMENKGQ"
     gene            complement(1698..3323)
                     /locus_tag="JQ356_000151"
     CDS             complement(1698..3323)
                     /locus_tag="JQ356_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY4620354.1"
                     /translation="MTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFF
                     VLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDP
                     DEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ
                     FAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVR
                     DTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVP
                     LSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETV
                     YVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDAC
                     YDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHV
                     PMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDS
                     RVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG"
     gene            complement(3782..3868)
                     /locus_tag="JQ356_000152"
     tRNA            complement(3782..3868)
                     /locus_tag="JQ356_000152"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3832..3834),aa:Leu,seq:gag)
     gene            complement(3883..4215)
                     /gene="secG"
                     /locus_tag="JQ356_000153"
     CDS             complement(3883..4215)
                     /gene="secG"
                     /locus_tag="JQ356_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HAY4620355.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA
                     KPTSDIPN"
     gene            complement(4443..5780)
                     /gene="glmM"
                     /locus_tag="JQ356_000154"
     CDS             complement(4443..5780)
                     /gene="glmM"
                     /locus_tag="JQ356_000154"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003905541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HAY4620356.1"
                     /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
                     IIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
                     HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
                     FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
                     ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL
                     RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
                     KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
                     AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV"
     gene            complement(5773..6621)
                     /gene="folP"
                     /locus_tag="JQ356_000155"
     CDS             complement(5773..6621)
                     /gene="folP"
                     /locus_tag="JQ356_000155"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HAY4620357.1"
                     /translation="MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHA
                     NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWLSVDTSKPEV
                     IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE
                     VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM
                     SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK
                     ENKRYE"
     gene            complement(6711..8645)
                     /gene="ftsH"
                     /locus_tag="JQ356_000156"
     CDS             complement(6711..8645)
                     /gene="ftsH"
                     /locus_tag="JQ356_000156"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HAY4620358.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
                     QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMIEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP
                     VDEPRTPNPGNTMSEQLGDK"
     gene            complement(8745..9374)
                     /gene="rlmE"
                     /locus_tag="JQ356_000157"
     CDS             complement(8745..9374)
                     /gene="rlmE"
                     /locus_tag="JQ356_000157"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HAY4620359.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
     gene            9500..9793
                     /gene="yhbY"
                     /locus_tag="JQ356_000158"
     CDS             9500..9793
                     /gene="yhbY"
                     /locus_tag="JQ356_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HAY4620360.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
                     ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(9950..10426)
                     /gene="greA"
                     /locus_tag="JQ356_000159"
     CDS             complement(9950..10426)
                     /gene="greA"
                     /locus_tag="JQ356_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HAY4620361.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
     gene            10674..12107
                     /gene="dacB"
                     /locus_tag="JQ356_000160"
     CDS             10674..12107
                     /gene="dacB"
                     /locus_tag="JQ356_000160"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HAY4620362.1"
                     /translation="MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVG
                     ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
                     ARFGADPTLKRQDIRNMIATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
                     SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
                     LDVIPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
                     QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
                     AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     EPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(12147..13319)
                     /gene="cgtA"
                     /locus_tag="JQ356_000161"
     CDS             complement(12147..13319)
                     /gene="cgtA"
                     /locus_tag="JQ356_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HAY4620363.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
                     PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE
                     NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
     gene            complement(13335..14300)
                     /locus_tag="JQ356_000162"
     CDS             complement(13335..14300)
                     /locus_tag="JQ356_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY4620364.1"
                     /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
                     MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG
                     VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE"
     gene            complement(14427..14684)
                     /gene="rpmA"
                     /locus_tag="JQ356_000163"
     CDS             complement(14427..14684)
                     /gene="rpmA"
                     /locus_tag="JQ356_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HAY4620365.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
     gene            complement(14705..15016)
                     /gene="rplU"
                     /locus_tag="JQ356_000164"
     CDS             complement(14705..15016)
                     /gene="rplU"
                     /locus_tag="JQ356_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HAY4620366.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            15275..16246
                     /gene="ispB"
                     /locus_tag="JQ356_000165"
     CDS             15275..16246
                     /gene="ispB"
                     /locus_tag="JQ356_000165"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HAY4620367.1"
                     /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
                     KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
                     DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
                     ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR"
     gene            16474..16752
                     /gene="sfsB"
                     /locus_tag="JQ356_000166"
     CDS             16474..16752
                     /gene="sfsB"
                     /locus_tag="JQ356_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HAY4620368.1"
                     /translation="MESNFIDWHPPDIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
                     PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK"
     gene            complement(16800..18059)
                     /gene="murA"
                     /locus_tag="JQ356_000167"
     CDS             complement(16800..18059)
                     /gene="murA"
                     /locus_tag="JQ356_000167"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HAY4620369.1"
                     /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
                     YHIDRGYERIEDKLRALGANIKRVKGE"
     gene            complement(18114..18368)
                     /gene="ibaG"
                     /locus_tag="JQ356_000168"
     CDS             complement(18114..18368)
                     /gene="ibaG"
                     /locus_tag="JQ356_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015585657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HAY4620370.1"
                     /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(18528..18821)
                     /gene="mlaB"
                     /locus_tag="JQ356_000169"
     CDS             complement(18528..18821)
                     /gene="mlaB"
                     /locus_tag="JQ356_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HAY4620371.1"
                     /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL
                     SRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR"
     gene            complement(18821..19456)
                     /gene="mlaC"
                     /locus_tag="JQ356_000170"
     CDS             complement(18821..19456)
                     /gene="mlaC"
                     /locus_tag="JQ356_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HAY4620372.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
                     EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
                     WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
     gene            complement(19475..20026)
                     /gene="mlaD"
                     /locus_tag="JQ356_000171"
     CDS             complement(19475..20026)
                     /gene="mlaD"
                     /locus_tag="JQ356_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HAY4620373.1"
                     /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA
                     TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
                     NSGDAPAAAPGNNETTEPVGTTK"
     gene            complement(20031..20813)
                     /gene="mlaE"
                     /locus_tag="JQ356_000172"
     CDS             complement(20031..20813)
                     /gene="mlaE"
                     /locus_tag="JQ356_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HAY4620374.1"
                     /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
                     VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
                     IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
                     FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
     gene            complement(20821..21630)
                     /gene="mlaF"
                     /locus_tag="JQ356_000173"
     CDS             complement(20821..21630)
                     /gene="mlaF"
                     /locus_tag="JQ356_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HAY4620375.1"
                     /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
                     LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
                     ADKKIVAHGCAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
     gene            21840..22817
                     /locus_tag="JQ356_000174"
     CDS             21840..22817
                     /locus_tag="JQ356_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HAY4620376.1"
                     /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEIIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
                     RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR
                     EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI
                     GTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY
                     SVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE"
     gene            22831..23817
                     /gene="kdsD"
                     /locus_tag="JQ356_000175"
     CDS             22831..23817
                     /gene="kdsD"
                     /locus_tag="JQ356_000175"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HAY4620377.1"
                     /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
                     MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
                     VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV
                     MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
     gene            23838..24404
                     /gene="kdsC"
                     /locus_tag="JQ356_000176"
     CDS             23838..24404
                     /gene="kdsC"
                     /locus_tag="JQ356_000176"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HAY4620378.1"
                     /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
                     LIAFSELLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
                     GGRGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            24401..24976
                     /gene="lptC"
                     /locus_tag="JQ356_000177"
     CDS             24401..24976
                     /gene="lptC"
                     /locus_tag="JQ356_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HAY4620379.1"
                     /translation="MSKARRWVTIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
                     EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
                     LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
                     LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            24945..25502
                     /gene="lptA"
                     /locus_tag="JQ356_000178"
     CDS             24945..25502
                     /gene="lptA"
                     /locus_tag="JQ356_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HAY4620380.1"
                     /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
                     LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
                     KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
                     TTVLVPSQLQDKNNKGQTPAQKKGN"
     gene            25509..26234
                     /gene="lptB"
                     /locus_tag="JQ356_000179"
     CDS             25509..26234
                     /gene="lptB"
                     /locus_tag="JQ356_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004091254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HAY4620381.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
                     LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            26282..27715
                     /gene="rpoN"
                     /locus_tag="JQ356_000180"
     CDS             26282..27715
                     /gene="rpoN"
                     /locus_tag="JQ356_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HAY4620382.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
                     PLLEQIDTHEEIDTSETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG
                     DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLED
                     ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
                     IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            27738..28025
                     /gene="hpf"
                     /locus_tag="JQ356_000181"
     CDS             27738..28025
                     /gene="hpf"
                     /locus_tag="JQ356_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HAY4620383.1"
                     /translation="MQLNITGNNVEITEALREFVRAKFAKLEQYFDRINQVYVVLKVE
                     KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
     gene            28143..28634
                     /gene="ptsN"
                     /locus_tag="JQ356_000182"
     CDS             28143..28634
                     /gene="ptsN"
                     /locus_tag="JQ356_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HAY4620384.1"
                     /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
                     DEA"
     gene            28680..29534
                     /gene="rapZ"
                     /locus_tag="JQ356_000183"
     CDS             28680..29534
                     /gene="rapZ"
                     /locus_tag="JQ356_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HAY4620385.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
                     ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKP"
     gene            29531..29803
                     /gene="npr"
                     /locus_tag="JQ356_000184"
     CDS             29531..29803
                     /gene="npr"
                     /locus_tag="JQ356_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HAY4620386.1"
                     /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
     gene            30017..30649
                     /gene="yrbL"
                     /locus_tag="JQ356_000185"
     CDS             30017..30649
                     /gene="yrbL"
                     /locus_tag="JQ356_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HAY4620387.1"
                     /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR
                     RELKYYAYLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR
                     YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHHISESEVIPVVCDNIGESTLI
                     PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
     gene            complement(30646..31374)
                     /gene="mtgA"
                     /locus_tag="JQ356_000186"
     CDS             complement(30646..31374)
                     /gene="mtgA"
                     /locus_tag="JQ356_000186"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HAY4620388.1"
                     /translation="MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAV
                     MVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHRGFDVASIEKA
                     LAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
                     YLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRS
                     RQAWILRQMYQLGGEPFMQQHQLD"
     gene            complement(31371..32024)
                     /gene="elbB"
                     /locus_tag="JQ356_000187"
     CDS             complement(31371..32024)
                     /gene="elbB"
                     /locus_tag="JQ356_000187"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709007.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HAY4620389.1"
                     /translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ
                     QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS
                     NFATLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA
                     EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE"
     gene            complement(32254..34590)
                     /gene="arcB"
                     /locus_tag="JQ356_000188"
     CDS             complement(32254..34590)
                     /gene="arcB"
                     /locus_tag="JQ356_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HAY4620390.1"
                     /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
                     AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
                     PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
                     VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
                     TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
     gene            complement(34686..35615)
                     /locus_tag="JQ356_000189"
     CDS             complement(34686..35615)
                     /locus_tag="JQ356_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312117.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HAY4620391.1"
                     /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
                     HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI
                     VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE"
     gene            36290..40750
                     /gene="gltB"
                     /locus_tag="JQ356_000190"
     CDS             36290..40750
                     /gene="gltB"
                     /locus_tag="JQ356_000190"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HAY4620392.1"
                     /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIV
                     EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET
                     GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD
                     DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP
                     VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE
                     TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTEN
                     NPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH
                     EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL
                     GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLNVDDLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            40763..42181
                     /locus_tag="JQ356_000191"
     CDS             40763..42181
                     /locus_tag="JQ356_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY4620393.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEQFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENKDADGVYAALPFLIANTKQLMGFGE
                     TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA
                     DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNWLEV"
     gene            42365..42844
                     /locus_tag="JQ356_000192"
     CDS             42365..42844
                     /locus_tag="JQ356_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HAY4620394.1"
                     /translation="MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWE
                     IGRRIVEFEQGGEARAAYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEI
                     RQTVSGELTPLGIPQTPSAEFPSAKIWQTLSAKLRGCLIFPQLLYCISYFRFVYSCK"
     gene            42861..43166
                     /locus_tag="JQ356_000193"
     CDS             42861..43166
                     /locus_tag="JQ356_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4620395.1"
                     /translation="MIYIEQLELIHKSGDVLYPVKITRKSSGKTAFHLVPFGLNKTHD
                     LLEVEDASEAIRLVIDERHSIRCSTLTATITNKKGKRIKRTGIYSIKGVNIKEYNVR"
     gene            complement(43242..43706)
                     /locus_tag="JQ356_000194"
     CDS             complement(43242..43706)
                     /locus_tag="JQ356_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY4620396.1"
                     /translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
                     LCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA"
     gene            complement(43703..44578)
                     /locus_tag="JQ356_000195"
     CDS             complement(43703..44578)
                     /locus_tag="JQ356_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312122.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HAY4620397.1"
                     /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPQALRDA
                     LAALVAPLQAHAQQVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLSNLPTIA
                     INDAQAAAWAEYQALEGDITDMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLAD
                     PHGPVCGCGRTGCVEAIASGRGIAAAAQGELMGADARTIFTRAGQGDEQAQQLIHRSA
                     HVLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHD
                     AGLLGAALLAQGEKL"
     gene            complement(44575..45264)
                     /locus_tag="JQ356_000196"
     CDS             complement(44575..45264)
                     /locus_tag="JQ356_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HAY4620398.1"
                     /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
                     AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
                     AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
                     ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ
                     WYNTAMKKAVL"
     gene            complement(45312..46802)
                     /gene="nanT"
                     /locus_tag="JQ356_000197"
     CDS             complement(45312..46802)
                     /gene="nanT"
                     /locus_tag="JQ356_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312124.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HAY4620399.1"
                     /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC
                     GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPT
                     GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVSGFL
                     GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS"
     gene            complement(46911..47804)
                     /gene="nanA"
                     /locus_tag="JQ356_000198"
     CDS             complement(46911..47804)
                     /gene="nanA"
                     /locus_tag="JQ356_000198"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HAY4620400.1"
                     /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
                     GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
                     VDEKYLPELKALAQQLMQERG"
     gene            complement(47926..48717)
                     /gene="nanR"
                     /locus_tag="JQ356_000199"
     CDS             complement(47926..48717)
                     /gene="nanR"
                     /locus_tag="JQ356_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417693.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HAY4620401.1"
                     /translation="MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMI
                     RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ
                     SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS
                     YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
     gene            49097..50463
                     /gene="dcuC"
                     /locus_tag="JQ356_000200"
                     /pseudo
     CDS             49097..50463
                     /gene="dcuC"
                     /locus_tag="JQ356_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417694.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
     gene            complement(50506..51003)
                     /gene="sspB"
                     /locus_tag="JQ356_000201"
     CDS             complement(50506..51003)
                     /gene="sspB"
                     /locus_tag="JQ356_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HAY4620402.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME
                     YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA
                     LRVVK"
     gene            complement(51009..51647)
                     /gene="sspA"
                     /locus_tag="JQ356_000202"
     CDS             complement(51009..51647)
                     /gene="sspA"
                     /locus_tag="JQ356_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HAY4620403.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
     gene            complement(52042..52434)
                     /gene="rpsI"
                     /locus_tag="JQ356_000203"
     CDS             complement(52042..52434)
                     /gene="rpsI"
                     /locus_tag="JQ356_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HAY4620404.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            complement(52450..52878)
                     /gene="rplM"
                     /locus_tag="JQ356_000204"
     CDS             complement(52450..52878)
                     /gene="rplM"
                     /locus_tag="JQ356_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HAY4620405.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKCTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            complement(53096..54223)
                     /locus_tag="JQ356_000205"
     CDS             complement(53096..54223)
                     /locus_tag="JQ356_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HAY4620406.1"
                     /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSRP
                     PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
                     LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
                     KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
                     TQAHLWLSPLHDETRAQMDKLWLALAGAKRENSPTLEINHRPLATMGAENQTLAVSFT
                     TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
                     AEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG"
     gene            54417..54815
                     /locus_tag="JQ356_000206"
     CDS             54417..54815
                     /locus_tag="JQ356_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HAY4620407.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRTGAKRD"
     gene            54969..56336
                     /gene="degQ"
                     /locus_tag="JQ356_000207"
     CDS             54969..56336
                     /gene="degQ"
                     /locus_tag="JQ356_000207"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HAY4620408.1"
                     /translation="MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAP
                     MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM
                     SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT
                     TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDCGKGI
                     KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESI
                     YLLMR"
     gene            56426..57493
                     /gene="degS"
                     /locus_tag="JQ356_000208"
     CDS             56426..57493
                     /gene="degS"
                     /locus_tag="JQ356_000208"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HAY4620409.1"
                     /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
                     ASYNLAVRRAAPAVVNVYNRGVNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGI
                     DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
                     VMRDDKQLTLQVTIQEYPATN"
     gene            complement(57556..58494)
                     /gene="mdh"
                     /locus_tag="JQ356_000209"
     CDS             complement(57556..58494)
                     /gene="mdh"
                     /locus_tag="JQ356_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HAY4620410.1"
                     /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK"
     gene            58929..59399
                     /gene="argR"
                     /locus_tag="JQ356_000210"
     CDS             58929..59399
                     /gene="argR"
                     /locus_tag="JQ356_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HAY4620411.1"
                     /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
     gene            59764..60027
                     /gene="yhcN"
                     /locus_tag="JQ356_000211"
     CDS             59764..60027
                     /gene="yhcN"
                     /locus_tag="JQ356_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417705.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HAY4620412.1"
                     /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG
                     VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK"
     gene            complement(60082..60354)
                     /locus_tag="JQ356_000212"
     CDS             complement(60082..60354)
                     /locus_tag="JQ356_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620413.1"
                     /translation="MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN
                     DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH"
     gene            complement(60446..62413)
                     /gene="aaeB"
                     /locus_tag="JQ356_000213"
     CDS             complement(60446..62413)
                     /gene="aaeB"
                     /locus_tag="JQ356_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HAY4620414.1"
                     /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
                     IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
                     AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
                     IIADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQ
                     GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT
                     PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
                     EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
                     LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
                     VQQRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
                     DRTERVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
                     IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
                     LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
     gene            complement(62419..63351)
                     /gene="aaeA"
                     /locus_tag="JQ356_000214"
                     /pseudo
     CDS             complement(62419..63351)
                     /gene="aaeA"
                     /locus_tag="JQ356_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417708.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
     gene            complement(63359..63562)
                     /locus_tag="JQ356_000215"
     CDS             complement(63359..63562)
                     /locus_tag="JQ356_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HAY4620415.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
BASE COUNT        15918 a        16895 c        15735 g        15157 t
ORIGIN      
        1 ctgaaactcg gcaaattcta ctcgttttgg gtaaaagatg caaatactgc tgggatttgg
       61 tgtaccgaga cgggacgtaa aatctgcagg cattatagtg atccatgcca cattttgtca
      121 acgtttattg ctaatcacgt gaatgaatat ccagttcact ttcatttgtt gaatactttt
      181 gccttctcct gctctccctt aagcacatta ttttacaaaa aacacactaa actcttcctg
      241 tctccgataa aagatgatta aatgaaaact catttatttt gcataaaaat tcagtgagag
      301 cggaaatcca ggctcatcat cagttaatta agcagggtgt tattttatga cgacgattct
      361 caagcatctc ccggtaggtc aacgtattgg tatcgctttt tctggcggtc tggacaccag
      421 tgccgcactg ctgtggatgc gacaaaaggg agcggttcct tatgcatata ctgcaaacct
      481 aggccagcca gacgaagagg attatgatgc gatccctcgt cgtgccatgg aatacggcgc
      541 ggagaacgca cgtctgatcg actgccgcaa acaactggtg gccgaaggta ttgccgctat
      601 tcagtgtggc gcatttcata acaccaccgg cggcctgacc tatttcaaca cgacgccgct
      661 gggccgcgcc gtgactggta ccatgctggt tgctgcgatg aaagaagatg gcgtgaatat
      721 ctggggtgac ggtagcacct ataaaggaaa cgatatcgaa cgtttctatc gttatggtct
      781 gctgaccaat gctgaactgc agatttacaa accgtggctt gatactgact ttattgatga
      841 actgggcggc cgtcatgaga tgtctgaatt tatgattgcc tgcggtttcg actacaaaat
      901 gtctgtcgaa aaagcctact ccacagactc caacatgctt ggtgcaacgc atgaagcgaa
      961 ggatctggaa tacctcaact ccagcgtcaa aatcgtcaac ccgattatgg gcgtgaaatt
     1021 ctgggatgag agcgtgaaga tcccggcaga agaagtcaca gtacgctttg agcaaggtca
     1081 tccggtggcg ctgaacggta aaacctttag caacgacgta gaaatgatgc tggaagctaa
     1141 ccgcatcggc ggtcgtcacg gcctgggcat gagcgaccag attgagaacc gtatcatcga
     1201 agcgaaaagc cgtggtattt acgaagctcc ggggatggca ctgctgcaca ttgcgtatga
     1261 acgtctgttg accggtattc acaacgaaga caccattgag cagtatcacg cgcatggtcg
     1321 tcagttgggc cgtctactgt accaggggcg ttggtttgac tcccaggcgc tgatgctgcg
     1381 tgactctctg caacgctggg ttgccagcca gatcactggt gaagttaccc tggagctgcg
     1441 ccgtgggaac gattattcaa tcctgaatac cgtctcagag aacctgacct acaagccaga
     1501 gcgtctgacg atggaaaaag gcgactcggt gttctcgcca gatgatcgta ttggtcaatt
     1561 gaccatgcgt aatctggata tcactgatac ccgagagaaa ctttttggtt atgccaaaac
     1621 tggcctgctc tcctcctctg ccacttcagg cgtgccgcag gtggagaata tggaaaacaa
     1681 aggccagtaa ttcgacatca accctgccct tcaggggggg ggttaccttg cttatcctct
     1741 gtaaactcct ttctgaacat cacataatcg aaaacatcat ggtttgcatc cacaacccgt
     1801 gagtctcctt tatagtgtgc aatcacttcc tcaagcgttt gcggctgttc cggctttgtt
     1861 acccccatcc acgcattaat aaggtaatta ttgtaagctg tcgaaaagat gttgttttcc
     1921 gttgtgcgat ccacgccatc cccaagaacg gggctatacc agataaacat cgggacatga
     1981 tatgcctgct ggctagcctc cctgcctcca tgaaaataga cgttcttctt cgtagggtca
     2041 cgttccaggc cgtggtcggc aaaatacatg accgaggcgc ggcgatcttt taataattca
     2101 aaaacctgac ctagcaaact atctgtgtaa tgaatggagt tgtcatagca ggcatcctga
     2161 tcgtcctgcg gttgaaacac ggcgctggat tgcggatagg cgctacaagc cggttcatgg
     2221 cttccattta aatgaagaac aatcagtttc ttttgctgcg tattttgctg taatgcttgc
     2281 gataaatgcg gcaacaacaa ttcatcaaat cctctgacat aaactgtttc catggcgcgc
     2341 atggcgatac tggtaactgc agtaccattc tgccgaaaag cggattgcga gcttagccag
     2401 aaagtctgaa atcctgcttg attagccata ttaataatgt tgtcggggta attatgaatg
     2461 tcatgactca aaacagaatc agcagttaaa gaaaggggaa ccgacagcgc agtgtaaggt
     2521 gcgccgctta ttgcttgatt aaacagtttg atctgttttc tttgtgcttc aacttgcggt
     2581 gtcgtagagc gtgtatatcc atacaaagac atattgtcga cacgtacaga ctcccccaca
     2641 atcaacacgt aggtatcaat acctgtatcc ctgactgata attgaaaata cggcaccgtg
     2701 tttgcaattg agagtaatct ttgatgctct ttcgctgcta aagcaaaata gttgagattg
     2761 aaaaacggcg tataggtagc aaatcgcgac gctagtatat atggactgaa cgttttttta
     2821 ttttttgcat ctttataagc aaattgacaa gcggaaaata aactgcccga aatgacaatc
     2881 agcaataata ttcctgtcac tttttttgtc ggcaaggaaa catcatattt tattattact
     2941 gcccaaaaaa gaagggataa aaaagcaaag gcacatagat aagggatata catccccagc
     3001 attttgacaa cttcatccgg atcactctgg agcacactaa tcgcaaatcc atcattgaaa
     3061 gttgtaccaa aggtacacca tgaatagagg ctaatactca tgtctgccgc agtcagtaac
     3121 acaaatggtg cggcaacaag cagacgaagc ggaagggatg atatacgttt tacaaccagg
     3181 atggtcagga cgaagaacag caatcgctga accatatgcg cgccggaaga ggcgactaag
     3241 ttcgtaatac caaaaacaat aacacaaaga tacaacaacc aatgagattt aaaacttcta
     3301 gcaaatttgt tgaatactgt catccagaaa tccaagttca caaccaatat aaacaattat
     3361 caacaatgtt caattttata tcagacatgt ttttcaactc tgatccatat cagaccgaaa
     3421 cactgttagt tttttctttt taaatgatgc ggccattgcg ttctcagtaa ttaaataaca
     3481 ttatcaatgc gtctctaaac attacgcaga acgtagccat cagtagttat actgacagga
     3541 gcaggatggt ttatcgagaa gtaaacatat ccgtattcgt accggaactg gagttgacac
     3601 aataaagtgc caattatgtc agcagaaggg aaaagtttat aactaaggcg taccggcacc
     3661 atcgtttcaa ggtaccagct acgagtaaag caactggacg agatacagat acctgacaac
     3721 cattcctcag accaggacca aaacgaaaaa agacgctttt cagcgtctct tttctggagt
     3781 ttggtaccga ggacgggact tgaacccgta agccctattg ggcactacca cctcaaggta
     3841 gcgtgtctac caattccacc acctcggcac ggatactact ttttagttcg ggatatcgct
     3901 ggtcggctta gccggagcag ctggttgagt ttgttcggtt ttcgccggtg cactcagatt
     3961 ttcccattcg ctacctttat tggttttgtt gctgttgatg ttacccagca ccagactgat
     4021 gatgaagaat aacgttgcca gcagcgccgt catgcgggtc atgaagttac cagaaccact
     4081 tgaaccaaac agcgtagcgg aagcgcctgc tccgaaggag gctcccatat cagcgccttt
     4141 accttgctgc agcatgatca gaccaacaag gccaattgcc acaataagga aaactaccaa
     4201 aagagcttcg tacataatca acctgttcct tgcggagttg ccgcgtacca atgcttcaac
     4261 caataaagcg ggagttttta atctttccca ctgaagcggg tgtgaatact aaccaaagcg
     4321 aatgaccttc gcaagggcaa ttttatcgca ttgtatcaac tgcggaaaaa aacagcaaaa
     4381 ccgatgtatt cgctgagaaa aaaggcgaca atcgccgcct ttttagccag tcatttatcg
     4441 ttttaaacgg cttttactgc atcggcgatg cggtgtgcaa attcagtcac ctgcgcttcg
     4501 tcttcgcctt ccaccatcac gcgaattaac ggttcggtgc cggatttacg cagcaacacg
     4561 cgtccacggt tgcccagcgc agcttcaacc tctgcggtca cggctttaac tgactcatgc
     4621 tcaagcggat cgccgctacc tgcggtgtaa cgcacgttaa ccagaatctg cgggaacatt
     4681 ttcatgccgc tgcaaaggtc gtgcaggctc atatggttac gtgccatcgc cgccagcacc
     4741 tgcaagccag caacgatgcc gtcaccggta gtggttttat ccagcaggat cacatgaccg
     4801 gaattctctg caccgatacg ccagcctttc tcctgcattt tttccagtac gtagcggtca
     4861 cccactttcg cgcgcgcaaa tggaatacct aactgtttca gcgccagctc aagccccatg
     4921 ttactcatca atgtacccac agcaccacca cgcagctggc cctgacgaag accttcacgc
     4981 gcgatgatat acatgatctg atcaccatcg actttattgc cttcatggtc aaccataatc
     5041 acgcgatcgc cgtcgccgtc gaaggcaata ccgagatccg ctttttcagc cagcacacga
     5101 gcctggagcg cgcgaacgtc ggtagccccc acttcggcat tgatgtttac accgttcggc
     5161 tcacaaccga tagcgataac gttcgccccc agttcacgca gcacgttcgg cgcgatgtga
     5221 taagtcgcac cgtttgcgca atccaccaca atcttcagtt cgctgaggct aagttcgttc
     5281 gggaacgtgg ctttgcaaaa ctcgatatag cgacccgcag catcaacgat acggctggct
     5341 ttacccagtt ctgccgaatc aacacagctg atctcttttt ccatttccgc ttcgatggcc
     5401 tcttctaccg catccggtag tttggtgccg tcgatagaga aaaatttaat gccattatcg
     5461 tagaacgggt tatgcgatgc agatatcaca attccggcct ctgcgcggaa ggtacgcgtc
     5521 agataagcca cggccggtgt tggcatcggg ccagtgaaga gtgcggaaag gcccgctgcc
     5581 gccagacccg cttccagtgc tgactccagc atatagccag aaatacgcgt gtctttacca
     5641 ataatgatct tacgggagcc gtggcgcgcc agcactttac ccgcggccca acccagctta
     5701 agcacaaaat caggtgtgat cggcgcatcc cctacacgac cacgaatccc atcggtaccg
     5761 aaatatttac gattactcat agcgtttgtt ttcctttgca gacagagtgg cttccaccac
     5821 ccgcatcgct tctacggttt ctttgacgtc atgaacacga ataatgtgcg cgccttgcat
     5881 tgcggcaatg accgcacagg ccagactacc gctcaggcgc tcggacggcc ccacgttcag
     5941 cagctgccca atcatcgatt ttcgtgacat acctaccaac agcggcaggt tgaaatggtg
     6001 aaattcagcc aggcgcgcca gtaatgaata gttatgggag agatttttac cgaaaccgaa
     6061 tccggggtcg agcaacaatt tctcttttgc gatacccgcc tgctcgcaac gtgctatttg
     6121 ctcaataaag tagcgattca cttctgcaaa gacatcgtca tacttcggag cttcctgcat
     6181 ggtttttgga tttccctgca tatgcatcag acaaaccggt aaaccggttt ctgccgccgc
     6241 ctccagagcg ccaggttcgg aaagggagcg gatatcgtta ataatgtgag cgccaacttt
     6301 cgctgactca cggatgactt ctggtttgga tgtatctacc gagagccaga cttcgaagcg
     6361 ttgagcaatt gcctcaacca caggaataac acgttgcaac tcttcttcaa cgctaacttc
     6421 cgccgcccct gggcgcgtgg actcgccacc aacgtcaatg atcgtcgcgc cagcgttgat
     6481 catcagattc gcatgtttca ccgcatctat cagcgagtta tgcgtgccac catccgaaaa
     6541 ggaatcaggc gtgacgttga ggatccccat tacgtgagga tggctaaggt ccagtgaagt
     6601 gccctgggca aagagtttca tggtgttatc cctggtatga attgataaga aaaaaccccg
     6661 gagcacgccc cggggttttc ggtacaaata cagtcatctg atgcgggaac ttacttgtcg
     6721 cctaactgct ctgacatggt gttacccggg ttcggcgtac gcggttcatc aaccggacga
     6781 ggagcctttg gactaccatt gtcgccagaa ttgttagaag cgcctggttc ttcccagccc
     6841 gctggcggac gtacatcgcg acgtgccatc aggtcatcaa tctgcggtgc gtcgatagtc
     6901 tcatatttca tgagagcatc tttcatcgca tgcagaatat ccatattgtc ggtcagaagc
     6961 tgacgcgcac gattatagtt acgctcaatc agtgctttca cttcctggtc gatgatacgt
     7021 gcagtttcat cggacatatg tttcgctttc gctacgctac ggccgaggaa cacttcacct
     7081 tcttcttccg cgtacagcag tggacccaat ttctcagaga agccccactg agtcaccata
     7141 ttacgcgcca ggttggtcgc aactttaata tcgttggacg caccggtaga aacatgttcc
     7201 ggcccgtaga tgatctcttc tgccagacga ccaccgtaca gcgtagaaat ctggctttcc
     7261 agtttctgac ggctggcgct gattgcgtcg ccctcaggca agaagaaagt cacacccagc
     7321 gcacgaccgc gtgggataat cgtcactttg tgcaccggat cgtgttccgg caccaagcga
     7381 ccgataatcg catgacccgc ttcgtggtaa gccgtcgatt ctttctgcgc ttccgtcatc
     7441 accatggagc gacgttccgc acccatcatg attttatctt tcgctttttc gaactcaatc
     7501 atcgacacaa cgcgtttgtt gccacgagca gcgaacagtg ccgcttcgtt taccaggttc
     7561 gccaggtcag caccggagaa accaggagta ccacgggcaa tgattgccgc gtcgatatcg
     7621 ggtgccaatg gtacgcgacg catgtgaact ttcaggatct gctcacgacc gcgaacatct
     7681 ggcaagccaa ccacaacctg acggtcgaaa cggccaggac gcagcagggc tgggtcaaga
     7741 acgtccggac ggttagtcgc ggcgataacg atgatacctt cgttaccttc gaagccatcc
     7801 atctcaacca gcatctggtt cagagtctgt tcacgttcat cgtgaccacc gcccagacca
     7861 gcgccacgct ggcggcctac ggcgtcgatt tcatcgataa agatgatgca cggtgccgct
     7921 ttcttcgcct gttcgaacat gtcacgaaca cgggatgcac ccacaccgac gaacatttct
     7981 acgaagtcag aaccggagat agtaaagaac ggaactttcg cttcgcctgc aatcgctttc
     8041 gccagcaacg ttttaccggt acccggagga ccgaccatca ggacgccttt cgggatctta
     8101 ccgccgagtt tctggaagcg gctcggctcg cgcagatact ctaccagttc agcaacttct
     8161 tcttttgctt cgtcgcagcc cgcaacgtca gcaaaggtcg ttttgatctg atcttccgtc
     8221 agcatgcgcg ctttgctctt accaaacgac atggcacctt tgccaccgcc gccctgcatt
     8281 tgacgcatga agaagatcca gacaccaatc agcaacagca tcgggaacca agagatgaag
     8341 atagaagcca gcaggcttgg ttcttcaggc ggttcaccga caaccttgac gttcttggtc
     8401 aacaggttat ccagtaattt cggatcctga accggaatgt aagtggtata acggttacta
     8461 tctttcttgg taacgttgat ttcacgtccg ttgatacgcg cttcacgaac ctggtcgtta
     8521 ttgacctctt gtaggaaggt agagtaatcc accttacggc cattagactc gctgggccca
     8581 aagctctgga atactgacat cagcacaacg gcaatgacca gccagagtat taggtttttc
     8641 gccatgtcac tcaagggatt aacctcttat tacaactgtg ttaaaaacag cgtcaggata
     8701 ctctatatcc agcatctttc aaactttcgt ctgaaatctc ccggttaggg tttacgcccg
     8761 gtcgctacaa tatacacttc ccgcgaacgt gcacgagaag agtccggctt acgaactttg
     8821 accttcgtaa acagggagcg aatttccctt agatactcat cgaaaccttc gccctggaac
     8881 accttcacta caaaactgcc acctggcgct aatacatcac gacacatttc taacgccagt
     8941 tccaccagat acatggcacg ggggatatcc accgccggtg ttccgctcat gtttggtgcc
     9001 atatcggaca tgacaacctg gactttgctg tcgccaacgc gctccagcag tgctttcatc
     9061 accagttcat cacgaaaatc gccctgaaga aagtccacac caacgatagg atccataggt
     9121 aaaagatcgc aagcgatgat gcggcctttg ccgccaattt gggtgaccac atattgtgac
     9181 caaccacccg gagcagcacc aaggtcgaca accgtcattc ccggtttaaa gagtttgtca
     9241 ctttgctgta tttcatcaag tttaaaccag gcacgggaac gtaacccctt tttctgtgcc
     9301 tgttgaacat atttatcgct aaagtgttcc tgaagccagc ggctggagct ggcagaacgc
     9361 ttcttacctg tcatttaact ttcccatggg gataactcat cgtaaccaat tgcgtaaatt
     9421 tttacgcgcc tatttggtga tatatgggag atggcggtag aatgacccgt tttcaatccc
     9481 aacgtaagca aaaaatacga tgaatctgag tactaaacaa aaacagcacc tgaaaggtct
     9541 ggcacatccg ctcaagccag ttgttctgct tggcagtaat ggtttgaccg aaggggtgct
     9601 ggccgagatt gaacaagcgt tagagcacca tgaactcatc aaggtgaaaa tcgccaccga
     9661 agatcgcgaa acaaaaacct tgatcgtgga agctatcgtg cgcgaaaccg gcgcctgtaa
     9721 tgtacaggtc atcggtaaaa cgctggtgct ttatcgccca actaaagaac gtaaaatctc
     9781 gctgccacgc taagattatc ctaaagttac acacatttgc tgtgtaaaac gaggggtttt
     9841 ccgcaggcag gagagcaaaa tgccacgctc tgttcgttga taaaaggccg catagcggcc
     9901 tttttccttt ctttacaata catcaacatc ttgatgtatt gggtaattct tacaggtatt
     9961 ccaccttaat tacttcaaat tctacttcgc cgcccggcgt tttgatgacc acaacatcat
    10021 cttcttcttt gccgatcagg ccacgagcaa taggcgagtt tacagaaatc aggttttgtt
    10081 taaagtcagc ttcgtcatcg ccaacgatgc gataagtctg ttcttcgtca gaatccagat
    10141 tcagcaccgt tacggtagca ccaaaaataa cgcgcccatt gttgggcatt ttggtgacat
    10201 caatcacctg cgcgttcgac agcttggctt cgatgtcttt aatacggcct tcgcagaaac
    10261 cctgctgttc acgagctgcg tggtattcgg cgttttcttt caggtcgcca tgctcacgcg
    10321 cttccgcgat agcagcaatg atttcaggac ggcgcacaga tttcagaaaa tccagctctt
    10381 cgcgtaattt ttcagcgccg cgtaaggtca tcggaatagc ttgcatttgt tatacctctt
    10441 gaatattcct gatggggcaa gtcttcaccc accccggctg ttcggcctgc ccggcataac
    10501 tcctcaccgg gaccagaagc aaaaaaatac cgacccgggt acaagtccca ggtcagctac
    10561 aattcacatt ttgatagtca ttttaccctg aagttcccga agggtcatcg tttactttat
    10621 agggcgttgc gccgtagtat gacggctcga ttccaggttg ttagcgcgag attatgcgat
    10681 tttccagatt tatcatcgga ttgaccagct gtatagcgtt cagtgttcag gccgcgaatg
    10741 ttgatgagta cgttactcaa ctccccgctg gtgccaacct tgccctgatg gtgcaaaaag
    10801 tcggcgcgtc ggcccccgct attgattacc acagtcagca gatggcgctg cccgccagta
    10861 cgcagaaagt gattactgcg ctggcggcgt tgattcaact cggccccgat tttcgtttca
    10921 ccacgacgct tgaaaccaaa ggcaatgtgg aaaacggcgt acttaagggt gacttagtgg
    10981 cgcgatttgg tgccgatccg acgttaaaac gtcaggatat tcgcaatatg atcgcgactt
    11041 tgaaaaaatc tggcgtcaac caaatcgatg gcaatgtgtt gatagatacc tccattttcg
    11101 ccagccacga taaagccccc ggctggccat ggaatgacat gacacaatgc tttagcgctc
    11161 cgcctgccgc tgccatagtt gaccgcaact gtttctccgt ctcgctctac agtgccccaa
    11221 aacctggtga tatggctttt atacgcgtgg catcttatta ccccgttacg atgttcagcc
    11281 aggtacgcac cctcccccga ggttctgccg aagcgcaata ctgcgaactg gatgtcatac
    11341 caggcgacct gaaccgcttt acgctgacgg gatgcctgcc acaacgttct gagccgctcc
    11401 cgttggcttt tgccgtgcag gatggagcca gctatgccgg ggcaattctg aaagatgagt
    11461 taaaacaggc aggtatcacc tggagcggaa cactgctgcg ccagactcag gttaacgaac
    11521 ctggaacggt agttgccagt aaacagtcgg ccccgttgca cgatctgctt aagattatgc
    11581 tgaaaaagtc ggacaacatg atcgccgata cggttttccg catgataggc catgcgcgct
    11641 tcaatgtgcc tggaacatgg cgggccgggt cggacgccgt gcgtcagatc ctgcgccagc
    11701 aagccggtgt cgatattgga aacaccatta ttgccgatgg ttcagggctt tcgcggcata
    11761 acctgattgc ccccgccacc atgatgcagg tgttgcaata cattgcccaa cacgacaatg
    11821 aacttaactt tatctccatg ctgccgctgg cgggctatga tggctctttg cagtaccgtg
    11881 caggtctgca tcaggcgggc gtggatggaa aagtctcagc gaaaaccggt tcgttgcagg
    11941 gggtatataa cctggcggga ttcattacca cagcgagcgg gcaacgaatg gcgtttgtac
    12001 aatatctttc tggctatgca gtagaaccgg cggatcagcg taatcgccgt attccgttag
    12061 tgcgttttga aagccgtttg tataaagata tttatcagaa caattagtca aaaagaaacc
    12121 ccggcacatg gccggggttt tgctgattaa cgcttgtaaa tgaactcaac gccttcttcg
    12181 tcgtcttcgt cccagtcatc atcccagtcc tcatcatcct cttcagcaat ctcttcaagc
    12241 tgctggcgat gataatcatc ccacatgaat tcgactttct ctggctgttt cgcttcttca
    12301 gcctgcacga ccgggttttc aatgataaag gtcatcacat cccagcagag atctttcacg
    12361 cccagtccac tcgccgcaga gatcagataa tatttatctt cccagcccag cgcttcagca
    12421 atcgctttcg ctttctcttc agcttctgcc ttatccagca gatcgatctt attgaacact
    12481 aaccaacgcg gtttcgccgc cagatcctgg ctgtattttt ccagctcgct gataataata
    12541 cgcgcgtttt caaccggatc ggtgccgtca atcggatcga tatcgatgag gtgcaacagg
    12601 acgcggcaac gttccaggtg cttcaggaag cggataccca gacctgcgcc ttccgcagcg
    12661 ccttcaatca gtcctggaat atcggcaaca acgaagctct tttcgttgtc cattcgtacc
    12721 acacccagac ttggcaccag agtggtaaac ggataatccg ccactttcgg tttagccgcc
    12781 gataccgcgc gaataaaggt cgatttaccc gcgtttggca tccccaacat accgacgtca
    12841 gccagcagca tcagctccag cagcagctca cgcttatcac ccggcgtacc gttggttttc
    12901 tgccgtggtg tacggttaac ggacgatttg aaacgggtat tgcccagacc gtgccagccg
    12961 cccttagcaa ccagcagacg ctgaccgtgt ttagtcatat cgcccatggt ttcaccagta
    13021 ccctggtcga ttacacgcgt acctaccggc actttaatcg tcacgtcttt accgcgctta
    13081 ccggtacaat cgcggcttgc gccgttctga ccgcgctctg cacggaaaga tttttcaaaa
    13141 cgataatcga taagcgtgtt caggttttcg tcggcttcca tccatacgtc accaccatca
    13201 ccaccgtcgc cgccatccgg gccgcctttc ggaatatact tttcgcggcg gaagctcacg
    13261 caaccattac cgccatcacc tgcaacgacc agaatcgatg cttcatcaac aaacttcatt
    13321 ttattctccg taaatcattc gcctgcgcgg ggttgcgata ccaccgttgt atgcttacgt
    13381 aatccgcccc aaatacgatg accaatggcg gaatacatcg cgcccgcaac cacgacaaac
    13441 gcaccgagat aacctaaaag gtttaacatc ggtctggcga agaaatcggg ccaggccagt
    13501 gataaaagat ctgaaaaaaa cagcgtaaac agtggggtga gcgtgatgat cgcgctcacc
    13561 tgcgctgcct gccagcgagc catcgcttcc gccagggcgc catatcctac caatgtattc
    13621 agtccgcaaa aaattaaaca tgcgagctgc cagtggctaa gctgcgctat cactcctggc
    13681 tttgccagag ggaagagcgc aattgtacat aaagtgtaca gcaaaaacag gatctgcggt
    13741 gaggccagcc gacgcaataa aaccttttgc gccacgccat aactcaccca aaccgtcgcc
    13801 gcaccgaccc caaagatgac tccccaggtg taatcagtga gctttgtaaa tatctcgacc
    13861 agactggtgt taaaaaacat caccaggccg ctcaggagca tcaatgcccc tacaacctga
    13921 gtgctgcgca ttttctcttt caggataaat acgctggcaa ccatcatgcc aactggcgag
    13981 agttgcccaa tcacctgcga agcggtcgga ctcaggtatt gcaaggatga gctgaacagg
    14041 atgaagttcc caaacagccc ggcggtcgcc actgccaaca aaatcaacca gcgtggctta
    14101 cgaaacacgc gtaatggcgg caacctcttc ttcaccgcaa gaatggcacc caggccaata
    14161 ctcgccatca agaaacggta aaacacgatt gtcggaggtt ccatcacctc cagcacctgc
    14221 ttcattgcga ttggcaacgc cccccagcaa attgctgtgg tgagcgccaa aagaatgcca
    14281 atgcctgcct gctgcttcat accgtattcc ctgcaaagcg catttgcgga ttaacgtcgc
    14341 accatgctca tttttaccgg ttatcgaatg taaaaagccc cgcaacgtgt tgcggggctt
    14401 tcatccgtta ccgggacgcg aaaaacttat tcagcttcga tgctgataaa tttacggttt
    14461 ttcgggcctt taacttcgaa tttcacttta ccgtctgctt tagcaaacag agtgtggtca
    14521 cgaccgcaac ctacgttagc gccagcgtgg aatttggtac cacgttgacg aacgatgatg
    14581 ctacccgcca gaacggattc gccaccgaaa cgcttaacgc ccaggcgttt agcttctgaa
    14641 tcgcgaccgt tacgtgtgga gccgccagcc tttttatgtg ccatttgaaa tctctcctca
    14701 ggtcttaggc gctgatgcca gtaattttca catcagtgaa ccactgacga tggccctgct
    14761 gcttacgata gtgtttacga cgacgaaact taacgatttt aactttctcg ccacgaccgt
    14821 gagcaacaac ttcagctttg attacgccgc catcaacgaa aggaacgccg attttgactt
    14881 cttcaccgtt tgcgatcatc agcacttcag cgaactcaac agtttcgcca gttgcgatgt
    14941 ccagcttttc caggcgaacg gtctgacctt cgcttactcg gtgttgttta ccaccacttt
    15001 ggaaaaccgc gtacatataa aactccgctt ccgcgcacac cttttcaatg attcagagtg
    15061 cgctataaat attcacaata gggcgcgaat attacgcaaa acgcacgcct ttgacaagtg
    15121 ctacagtcaa tacacgaaga aaaaaaacac aacttgtacg gtaacgttta tctgtgccat
    15181 tttttcagta caatcaccct atattcctaa ccataaaccc taagttgcct ttgttcacag
    15241 taaggtaatc ggggcgaaaa gcccggcttt tgcgatgaat ttagaaaaaa tcaatgagtt
    15301 aaccgcgcaa gatatggcgg gtgttaatgc ggcaatcctt gagcagctta attccgacgt
    15361 ccaactgatc aatcagttag gctattacat cgtcagcggc ggcggtaaac gtattcgtcc
    15421 gatgattgct gtactggctg cacgagctgt tggctatgag ggaaatgcgc atgtcaccat
    15481 tgctgccctg atcgagttta tccacacggc gactctgcta cacgacgacg ttgtggatga
    15541 atcagatatg cgcaggggta aagctaccgc caacgctgca tttggcaatg ccgccagcgt
    15601 gctggtaggc gattttattt atacccgcgc gttccagatg atgaccagcc tcggttcact
    15661 caaagtgctg gaagtcatgt cagaagctgt aaacgtcatc gcagaaggtg aagttctgca
    15721 actgatgaac gttaacgatc cggacatcac tgaagaaaac tacatgcgcg ttatctatag
    15781 caaaaccgcg cgtctgtttg aggctgccgc gcagtgttcc gggattctgg ctggctgtac
    15841 gccggaggag gagaaaggcc tgcaggatta tgggcgctat ctcggcactg ctttccagtt
    15901 gatcgacgat ttactcgatt acaatgccga tggcgaacag ttaggtaaaa acgtcggcga
    15961 cgatctgaac gaaggtaaac cgacgctgcc gctgctgcat gcgatgcatc atggcacacc
    16021 agaacaggca cagatgatcc gtaccgccat cgaacagggt aacggtcgcc atcttctgga
    16081 accggttctg gaagcaatga acgcttgtgg atctcttgaa tggacgcgtc agcgcgccga
    16141 ggaagaagca gacaaagcca tcgcagcgtt acaggtgctc ccggacaccc cttggcgaga
    16201 agcactcatc ggcctcgcgc acatcgctgt tcaacgcgat cgttaatccc ctcccttcat
    16261 cccgcgcagt gcgcgggatg attccagtaa attccataaa aacactaatt cagcgctata
    16321 acacctgaaa aaaagggcga tgaatcttta tatattctga atattcacac tctttacagg
    16381 aactttttag agcaataggc catcaggagt atagtgatgc ccgacagaag aagtgttctg
    16441 aatgaaagcg actaacttaa ggagtgagga aagatggaaa gtaatttcat tgactggcat
    16501 ccccctgaca tcattgcagg tttgcgcaag aaaggaacgt caatggcggc ggaatctcgc
    16561 agaaatggtt tgagttcctc aacgctggca aacgcattat cgcgcccatg gccgaaagga
    16621 gagatgatta ttgcgaaagc cctgggaact gacccctggg ttatctggcc atcacgctac
    16681 catgatccgc agacccatga gtttatcgac agaacgcagt tgatgcgtag ctacactaaa
    16741 ccgaaaaaat gagtggtctg gcggtagccc cgcgaacggg gctgccagct ctcagacgat
    16801 tactcgcctt tcacacgctt aatatttgca cctaaagcgc gcagtttgtc ttcaatgcgt
    16861 tcgtagccac gatcgatgtg ataaatacga tcaaccaccg tcgtcccttc cgcaatacag
    16921 ccagccagca ccaggcttgc tgatgcacgc agatcggttg ccataacctg tgcaccagaa
    16981 agtttttcaa caccatgaca aataacggta ttgctttcga tttcggcatg cgcgcccata
    17041 cggctaagct ccggcacatg cataaagcgg ttttcaaaga ccgtttcggt gatgaatccg
    17101 gtcccttctg ccaccaggtt caacagcgtg aactgggcct gcatatcggt cgggaatgcc
    17161 ggatgcggcg cggtacgtac gttaacagcc ttcggacgtt tgccatgcat atccaggcta
    17221 atccagtctt cgccgacttc gatgtccgct ccagcgtcac gcagtttcgc cagcacggcg
    17281 tcgagagtat ctggctgcgc gttacggcag ataattttgc cgcgagaaat cgccgccgcc
    17341 accaggaaag taccggtttc gatacgatcc ggtagcacgc gatagacacc gccgcctaaa
    17401 cgttccacac cttcgatgac gatacgatcg gtgccctgac cgctaatttt cgcacccagc
    17461 gtaatcagga agttcgcggt atcgacgatt tccggttcac gcgctgcgtt ttcaataatc
    17521 gtggtacctt ccgccagggt tgcagcacac atgatggtca ccgttgcgcc aacgctgact
    17581 ttatccatca cgatatgtgc gcctttcaga cgaccatcga cggaagcttt aacgtaacct
    17641 tcttccagtt tgatggtcgc gcctaattgt tcgaggccag aaatgtgtag atcaaccgga
    17701 cgcgcaccga tcgtacaacc gccaggcagt gaaacttgcc cctgaccaaa gcgcgctacc
    17761 agcggcccca gtgcccagat agaagcacgc atggttttaa ccagatcgta aggtgcgcag
    17821 aatacattaa cgtcgcgggc atcaatatgc acagaaccat tacgttctac tttcgcaccc
    17881 agctgactta gcagcttcat tgatgtatcg acgtctttca gtttcgggac gttctggatc
    17941 tctaccggtt cttccgccag tagagcggca aaaaggatag gcagagcagc atttttagcg
    18001 ccggaaattg tgacttcgcc ctggagcttc gttggcccct gaacacgaaa tttatccatt
    18061 tagtttgttc tcagttaaca attcatatcc gctaccggcg aatcgcccat agctcaaaag
    18121 ccgttcagtt tgcgatcgcg cgcccactcc gcaggggtat acgctttgat cgacacagca
    18181 tgaatgcggt tatccgcaat atattccatc agcgggccat agaccgtctg ctgtttttta
    18241 acccgactca tgccgtcaaa caactcaccc acggcaataa cctgaaagtg gctgccatcg
    18301 ccggaaacgt ggacttcctg gagggagaga gcgttcatca acacgctctg aatttcatta
    18361 ttttccatgg gatcttcaat catcagttaa taaaccagcg aaacatctta gagcaaagtt
    18421 gcgctggcat aaataagcaa aaagcctcgc tgataaatca gacaaggctc gacttgcagg
    18481 caggtttgcc ggacaggcgg ttaacgccat atccggcctg aaaaaattta acgaggcaga
    18541 acatcagcag gcaaattata caatttcgcc agggtataca ctttgtcgtt taccccctga
    18601 agcgtcacat tgttgccctg ctttttcgcc agatcgataa gatggagcag cagtgccagt
    18661 ccccccgtat ccacgcggga cacacggcta agatcgatgc aggtaatccc cttcaccgct
    18721 tcctcacgca tttcccaaag cggtagcaaa acgtcctgat ccagctctcc ggataacgcc
    18781 agcgtgtcac ccgtctgcat ccagctcagt gactcgctca ttattttttc tcttccagag
    18841 tgattttctg ttgagaaatc gatttcagtt gcgcagtcag gccgtcgata cctttggtac
    18901 gcagcagcgt tccccactcg ttttgtttgg tggtgatcat actgacgcct tcagcaatca
    18961 tgtcgtaagc ctgccagttg cccgtctggg agtttttacg ccactggaag tccagacgca
    19021 ccggcgggcg gccattcgga tcaataatgg taacgcgaat cggcacaatg gttttatcgc
    19081 ccagcggctg ttctggcgca atctgatagg tttgaccatg atacatcgcc agcgcctgac
    19141 cgtaagcctg cttcaggtac tcacggaaag cggcaaagta ggcttcacgt tgagcagggg
    19201 tcgcactctt gtaatactgg cccagcacca gcgcaccggc gtatttcacc tgtacgtatg
    19261 gcagcagttc ctgatcaaca atggtacgca gataatccgg gttggcccga atttgcggtt
    19321 gctcattctt caggcgatcg aacgttttct gcgccgcctc gtccatcagc ttataaggat
    19381 tggtctggtc tgccgcggtt gccgcactca gcggtgcaat caccagcaaa gcgaccatca
    19441 ttaaacgttt aaacatgcgt cggttctcct gaaattattt cgttgtaccc acaggttcag
    19501 tggtttcatt attacctggc gcagcagctg gcgcatcgcc actattctta ttgtcatcgc
    19561 ctttactacc gtaaaggaac tgaccaatga gatcttccag caccatcgca gacttagtgt
    19621 cctgaattgt atcgccatcc ttcaggatag cagtccccag ttccgggtct tcaaaaccga
    19681 cgtttaatgc cagatattgt tcccccagta ggccggaagt acgaatgctc agcgaactgg
    19741 tatctggaat gtggttataa cgttgttcaa tttccagcgt tacgcgtggc agataggttt
    19801 tcgggtccag cgtaatatcc gccacccggc ccacaacaac gccaccaata ctgaccggag
    19861 agcgcgcttt caggccgcca atgttatcga acgtcgcata aagcgtgtag gtcggttcag
    19921 tacgtatgga cgtcacgttc gccgccttca ggcaaacaaa cagagccgcc agcagtgctg
    19981 ctaataaaaa gatacccacc caaatttcat tttttttcgt ttgcatgtac tcaattccca
    20041 aacatcaatg cggtcagcac aaaatccagc cccagaacag ccagagacga gtggacaacg
    20101 gtgcgagtgg ttgcccggct aatcccggca gacgtcggga tggcgtcgta gccgttaaac
    20161 aacgaaatcc acgtcaccgt gatggcgaac accacgctct taatcagaca gttgaccaga
    20221 tccatacgcc agtcgacggc attttgcatt gccgaccaga agaacccgct atcaatgcct
    20281 ttccaactga cgccgaccag agatccgccc cagatcccca cggcgacgaa aataaccgtc
    20341 aacagtggta atgaaataac cccagcccag aaacggggag aaataacccg acgcagcgga
    20401 tccaccgcca tcatctccat actggagagt tgctctgtag cgcgcatcag gccgatttct
    20461 gcggttagcg ccgaaccagc acgcccggca aacaacaacg cggcaaccac cggccccagt
    20521 tcacgcagta gcgataacgc caccagcata cccagactgg tttccgcact ataagtggtc
    20581 agaaccagat aaccttgcag ccccaacacc attccgatga acacgccaga aaccacaata
    20641 atcagcatcg acaggacgcc gacattatag agctggcgca ccagcagcgg cgcatgtttg
    20701 cgaaattccg gtttgccgac cagcgcattg aataacatta acccggcccg cccgaacgtt
    20761 ctcagggttt taatcccttt atgtccgagc gacgccagcg catttaacag catgagtggc
    20821 ttaactccct ggtaaaagat cagcgtgata atcgccggca ggatagcgga acggaacagg
    20881 cccgtcagct atcccgtcca gaaactgacg tacgcgcgga tcaggattcg cctgcaacgc
    20941 ctgggcacag ccatgagcga caattttttt gtccgccagg atccaggcgt gatccgcaat
    21001 acttaacact tccggcacat cgtgagaaac caccacacaa gtcacgccca gcgcgctgtt
    21061 cagctcagaa atcagcttca ccagtacgcc catggtgatg ggatcttgcc caacaaaagg
    21121 ttcatcaaac atgatgagat ccggctccag cgcaatcgca cgcgccagcg ctgcacgccg
    21181 cgccatccca ccggaaagtt cagaaggcat tagtttagcc gctccacgca gccccacggc
    21241 ctccagcttc atcatcaccg tactatgcaa caatggcgcg ggaagttggg tatgttcgcg
    21301 cagtggatag gcgacgttgt caaatacgtt catatcagtg aacaacgccc cggactgaaa
    21361 taacatgctc atccgtttgc gcactgtata caggcgcgaa cgagacatcg ccggaatatt
    21421 ctcaccatcg aaaaggatct caccatgatc tggtgcgatt tgcccgccaa tcagacggag
    21481 tagcgtcgtt ttaccgatgc ccgatggccc catgatcgcc gtgatcttcc ctcgcggcac
    21541 ggtcagggaa atattatcga agatgcagcg attgccacgc gtaaaactga catcgcgcat
    21601 atcgactaaa ttcgccacag actgctccat aattcaccct tcgtcttgcg ttgattttct
    21661 aagcatggcg ctcaatttaa ccttgaaccc aacatattta cagaatatta cccgctgtgg
    21721 ttagcgaaag ctggcatttg ttttactttt tagccgcata aagtcaaaat taagaatccg
    21781 ttacggcttt ctgaaaatct tcagcggacc ggcgagtata cctgaagaaa ggacgttaga
    21841 tgcttttagc tacggcactg ttaattgttg gtttactttt ggtcgtttac agtgccgacc
    21901 gcctggtttt tgccgcgtct attctttgcc gaacctttgg catcccgccg ctgatcatcg
    21961 gcatgacggt ggtcagtatt ggtacatcgt taccagaaat catcgtctcg cttgccgcgt
    22021 ctctgcacga acaacgcgat ttagccgttg gtacagccct cggctcaaac attatcaata
    22081 ttttgctgat cctcggtctg gctgcgctgg ttcgtccttt taccgtccat tccgatgttc
    22141 tgcgtcgtga attaccctta atgttgttgg tcagcgtagt ggccggttcc gtactctatg
    22201 acggacaact tagtcgcagc gatggtatct ttctcctctt tctggctgtg ctatggctgc
    22261 tgttcattgt taaacttgca cgtcaggctg aacgtcaggg gactgacagc ctgaccagag
    22321 agcagcttgc agagctgccg cgtgacggcg gattgcccgt cgcgttttta tggctcggca
    22381 ttgcgcttat catcatgcca gtggccacgc ggatggtggt tgataacgcc acggtgctgg
    22441 cgaattactt tgccatcagc gagttgacga tgggtctgac ggcaattgct atcggaacca
    22501 gcctgccgga actggcaacc gcaatagcgg gggttcgcaa aggtgaaaac gacattgctg
    22561 tcggaaatat cattggcgca aacattttta atattgtcat cgtgttgggt ttacccgcgc
    22621 tgataacacc aggagagatt gatccattgg cgtacagtcg tgactacagc gtgatgttgc
    22681 tggtgagcat tatttttgcg ttgctgtgct ggcggcgctc cccgcaaccg ggccgtggtg
    22741 taggggtatt attaactggc ggatttatcg tatggctggc gatgttgtac tggttatcgc
    22801 caatactcgt tgaataactg gaaacgcatt atgtcgcacg tagagttaca accgggtttt
    22861 gactttcagc aagcaggtaa agaagtcctg gcgattgaac gtgaatgcct ggcggagctt
    22921 gatcaataca tcaatcagaa tttcacgctt gcctgtgaaa agatgttctg gtgtaaaggg
    22981 aaagttgtcg tcatggggat ggggaaatcg gggcacatcg ggcgcaaaat ggccgcaacg
    23041 tttgccagca ccggtacacc ttcatttttc gtccatcctg gtgaagccgc gcatggtgat
    23101 ttaggcatgg tcaccccaca ggatgtggtg attgctatct ctaactcagg tgaatccagc
    23161 gaaatcacgg ccttaattcc agtgcttaag cgtcttcacg taccgttaat ctgcatcacc
    23221 ggtcgcccgg agagcagcat ggcgcgcgcc gcagatgtgc atctgtgtgt taaagtagcg
    23281 aaagaagcct gtccgttagg gctggcaccg accagcagca ccaccgccac gctggttatg
    23341 ggcgatgccc tcgctgtcgc gctgttaaaa gcacgcggct ttactgctga agattttgcg
    23401 ctctcacacc caggcggcgc actgggtcgt aaacttctgc tgcgcgtaaa cgatattatg
    23461 catacgggcg atgagatccc gcatgttaag aaaacggcca gtctgcgtga cgcattgctg
    23521 gaagttaccc gcaaaaatct tggtatgact gtcatttgcg atgacaatat gatgattgaa
    23581 ggcatcttta ccgacggtga tttacgccgt gtcttcgata tgggagtgga tgttcgtcag
    23641 ttaagtattg ccgatgtgat gacgccgggg ggaatacgcg tgcgccctgg cattctggcc
    23701 gttgaggcac tgaacttaat gcagtcccgc catatcacct ccgtgatggt tgccgatggc
    23761 gaccatttac tcggtgtgtt acatatgcat gatttactgc gtgcaggcgt agtgtaaaga
    23821 ttcaaggata aacaacaatg agcaaagcag gtgcgtcgct tgcgacctgt tacggccctg
    23881 tcagcgccga cgttatagca aaagcagaga acattcgtct gctgatcctc gacgttgatg
    23941 gcgtactgtc agatggcctg atttatatgg gcaataacgg cgaagagctg aaagcgttca
    24001 atgttcgtga cggttatggc attcgttgtg cgctcacctc tgatattgaa gtcgctatca
    24061 ttaccgggcg aaaggctaaa ctggtagaag atcgttgtgc cacattgggg atcactcact
    24121 tgtatcaggg gcagtcaaac aaactgatcg cctttagcga actgctggaa aaactggcga
    24181 ttgccccgga aaatgtggct tatgtcggcg atgatctcat cgactggccg gtaatggaaa
    24241 aagtgggttt aagcgtcgcc gtggccgatg ctcatccact gttgatcccg cgcgccgatt
    24301 atgtgacgcg cattgctggc ggtcgtggcg cagtgcgaga agtttgcgac ttattactcc
    24361 tggcgcaggg caaactggat gaagccaaag ggcaatcgat atgagtaaag ccagacgttg
    24421 ggttaccatt gtgctatcac tggcggttct ggtgatgatc ggcattaata tggccgaaaa
    24481 agacgatacc gcccaggtgg tcgtcaacaa caatgatccc acctataaaa gcgagcatac
    24541 ggacacgctc gtctataacc cagaaggggc actaagctat cgattgattg ctcaacacgt
    24601 tgaatattat tccgatcagg ccgtttcgtg gtttacgcag ccggtactta ccacgtttga
    24661 taaggataaa atcccgacat ggtccgtaaa agcagataaa gccaagctga ccaatgaccg
    24721 gatgctctat ttatatggac acgttgaagt caacgcactt gtgccggact ctcaacttcg
    24781 cagaatcacg acggataacg cgcagatcaa tctggtgacg caggatgtta cctctgaaga
    24841 cctcgtcacg ttatacggaa caacatttaa ctccagcggt ctgaaaatgc gcggcaactt
    24901 acgcagcaag aacgccgagc tgattgaaaa ggttagaaca tcctatgaaa ttcaaaacaa
    24961 acaaactcag ccttaatctt gtgcttgcca gctcacttct ggccgccagc attccggcat
    25021 ttgccgtaac cggagacact gatcagccga tccacattga atcggaccag caatctcttg
    25081 atatgcaagg caacgtggtt acctttaccg gtaatgtcat cgtcacccag ggcaccatca
    25141 aaattaatgc cgacaaagtg gtcgttaccc gtccgggcgg cgaacaaggt aaagaagtga
    25201 ttgacggcta cggtaaaccg gcaacgttct accagatgca ggacaacggt aaacccgttg
    25261 aaggtcatgc ttcccagatg cactacgaac tggcaaaaga ttttgtcgtt ctgacgggta
    25321 atgcttatct gcagcaggtc gatagcaaca ttaagggcga taagatcact tacctggtga
    25381 aagagcagaa aatgcaggct ttcagcgaca aaggcaagcg cgtaacaacc gttctggtgc
    25441 cgtcgcagct gcaggacaaa aacaacaaag gccagacccc ggcacagaag aagggtaatt
    25501 aattcgttat ggcaacatta actgcaaaga accttgcaaa agcctataaa ggccgtcgcg
    25561 tggtagaaga cgtcagcctg accgtcaact ccggggaaat tgtcggtctg ctggggccaa
    25621 acggtgccgg taagaccacc actttctata tggttgttgg cattgtgccg cgcgatgcgg
    25681 gcaacatcat tattgatgat gacgatatca gtctgctgcc tctgcatgca cgcgcgcgcc
    25741 gcggtatcgg ctatctgcca caggaagcct ccattttccg tcgcctcagc gtttacgata
    25801 acctgatggc ggtactgcaa attcgtgacg acttgtctgc tgaacaacgt gaagaccgcg
    25861 cgaacgagct gatggaagag tttcacattg agcacctgcg tgacagcatg gggcagtcac
    25921 tctccggggg tgaacgtcgc cgtgtagaaa ttgcccgcgc actggctgcg aatccgaaat
    25981 ttattctact cgacgaaccg tttgccgggg ttgacccgat ctcggttatc gacattaaac
    26041 gcatcattga acacctgcgc gacagcggcc tgggcgtact gatcactgac cacaacgtgc
    26101 gtgaaacact ggcggtttgt gaacgcgctt atatcgtcag tcaggggcat ttgattgccc
    26161 acggcacgcc tacagaaatc ttacaagacg aacacgttaa gcgtgtatac cttggggaag
    26221 acttcagact ctgatagggt agaagtttgc gacgttttag caggagagta cgattctgaa
    26281 catgaagcaa ggtttgcaac tcaggcttag ccaacaactg gcgatgacgc cacagcttca
    26341 acaggcgatt cgtctgttgc agttgtcgac gctggaactt cagcaggagc tacagcaggc
    26401 gctggagagt aatccgctgc ttgagcaaat cgacactcat gaagaaatcg acaccagcga
    26461 aacgcaagac agtgaaacgc tggacaccgc cgacgcgctc gaacaaaaag agatgccgga
    26521 agagctgccg ctcgatgcca gttgggacac catttacacc gctggtacac catccggcac
    26581 cagcggtgac tacattgacg atgagctgcc ggtctatcag ggcgaaacga cgcagacctt
    26641 gcaggattac ctgatgtggc aggtcgagct gacaccgttt tccgacactg accgcgctat
    26701 tgctacctct atcgtcgatg ccgttgatga caccggttat ctgactgtcc cgctggaaga
    26761 tattctcgaa agtatgggcg atgaagagat cgacatcgac gaggttgaag ccgtccttaa
    26821 gcggatccaa cggtttgatc cggtcggtgt agcggcaaaa gatctgcgtg actgcctgct
    26881 aatccaactc tcccaattcg ataaaaccac gccgtggctg gaagaggcca gactgatcat
    26941 tagcgatcat ctcgatctgt tagccaatca cgacttccgc actttaatgc gcgtcacgcg
    27001 tctgaaagaa gatgtgctga aagaagccgt caatctgatc cagtcgctcg atccgcgccc
    27061 cgggcagtcg atccagactg gcgaacctga gtatgtcatt ccagatgtgc tggtgcgtaa
    27121 gcataacggt cactggacgg tagaactcaa cagtgacagc attccgcgtc tgcaaatcaa
    27181 ccagcactac gcctcgatgt gcaataacgc gcgcaacgat ggtgacagcc agtttatccg
    27241 cagcaatctg caggatgcca aatggttgat caagagtctg gaaagccgta acgatacgct
    27301 actgcgcgtg agtcgctgta tcgttgaaca gcagcaagcc ttctttgagc aaggtgaaga
    27361 atatatgaaa ccgatggtac tggccgatat cgcccaggct gtcgaaatgc atgaatcgac
    27421 gatatctcgc gtgaccacgc aaaaatacct gcatagtcca cgaggcattt ttgaactgaa
    27481 gtatttcttt tccagtcacg tcaataccga gggcggcggc gaagcttcct ccacggcgat
    27541 tcgtgcgctg gtgaagaaat taatcgcggc ggaaaaccca gcgaaaccgt tgagcgacag
    27601 caagttaacc tctttgctgt cggaacaagg tatcatggtg gcacgccgca ctgttgcgaa
    27661 gtaccgagag tctttatcca ttccgccgtc aaaccagcgt aaacagctcg tttgacccaa
    27721 ccgataagga agacactatg cagctcaaca ttaccggaaa taacgtcgag atcaccgagg
    27781 cactgcgcga atttgttaga gccaaatttg ccaaacttga gcaatatttt gaccgaatca
    27841 accaggtcta tgttgttctg aaagtggaga aagtcaccca cacctcagat gcaacactgc
    27901 atgtaaacgg tggtgaaatt catgccagcg cggaaggtca ggacatgtac gctgccattg
    27961 atggcttaat tgataagctg gcacgccagt tgaccaaaca taaagataaa ctgaaacaac
    28021 actaattgtc cgggcaatta gcatgtgcat ggcggcctgt tgtgcggcac aacgggccat
    28081 ttgtacggtt aatgctccga gcctgttcca ctgtttgagt gggcaggttc ttaggtgaaa
    28141 ttatgacaaa taatgataca actctacagc ttagcagtgt tcttaacagg gaatgtacgc
    28201 gaagccgcgt tcactgtcag agcaaaaaac gcgccctgga aatcatcagc gagctggcgg
    28261 cgaaacaact tagcctgccg cctcaggtgg tttttgaagc tatcctgacg cgggaaaaaa
    28321 tgggcagtac cggtatcggc aatggtattg ccattccgca tggcaaactg gaagaagata
    28381 ctctgcgcgc cgttggcgtt ttcgttcagc tcgaaacgcc tatagctttc gatgccatcg
    28441 acaaccaacc ggtggactta ctttttgccc tgctggtgcc ggcagaccaa actaaaacgc
    28501 acctgcatac tctgtcgctg gtggcgaaac gtctggcgga caaaaccatc tgccgccgtt
    28561 tacgcgcagc ccagagcgat gaagagctgt atcaaatcat tacggatacc gaaggtactc
    28621 cggatgaagc gtagttattc ggtaatgtct cttttagacg ttgtgaggag aaacagtaca
    28681 tggtactgat gatcgtcagc ggacgttcag gttcaggtaa atctgtcgcc ctgcgtgcgc
    28741 tggaagatat gggtttttac tgcgtggata accttcccgt agtgttgtta cccgatctgg
    28801 ctcgaaccct ggccgatcgc gagatttctg ccgccgtcag cattgatgtt cgtaatatgc
    28861 cggagtcacc agaaatattc gaacaggcga tgagtaacct gcctgacgct ttctcaccgc
    28921 aactcctgtt cctggatgcc gaccgtaata ccttaattcg tcgttacagt gacacgcgcc
    28981 gactgcatcc gctttccagc aaaaacctgt cgctggaaag tgctatcgac aaagaaagcg
    29041 atttgctgga gcctctgcgt tcgcgagcgg atctgattgt cgatacctca gaaatgtccg
    29101 ttcacgagct ggctgaaatg ctgcgtaccc gtctgctggg taaacgtgaa cgcgaactga
    29161 ccatggtctt tgagtctttc ggcttcaaac acggtatccc tatcgatgca gattacgtct
    29221 ttgacgtgcg cttcttgccg aacccgcact gggatccgaa actgcgtcca atgacaggtc
    29281 ttgataaacc tgtcgccgcg ttcctcgacc gccacacaga agtacacaat tttatctacc
    29341 agacgcgaag ctatcttgag ctatggttac ctatgctgga aaccaacaac cgtagctact
    29401 tgacggtcgc cattggttgt accggcggga agcaccgttc ggtgtatatt gcagagcaac
    29461 tggcagacta cttccgctcg cgcggtaaaa acgtccagtc acgccatcgt acgctggaaa
    29521 aacgtaaacc atgaccgtca agcaaactgt tgaaatcaca aacaagctgg gcatgcatgc
    29581 ccggcctgca atgaagctgt ttgaattaat gcagggtttt gacgctgaag tgctgttacg
    29641 taatgacgaa ggcaccgagg ccgaagccaa cagcgttatt gcgctgctga tgttggattc
    29701 tgccaaagga cggcagattg aagttgaagc gaccggccca caggaagagg aagcactggc
    29761 cgccgttatc gccctcttta actctggttt tgatgaagat taatcttcat cactttgaca
    29821 tacaactccc ttcaaactcc ccccgacaat aagaaaatca cgtactgaaa tcgttctcaa
    29881 tcaacgtcat ttgtacattt tgtgcgcttt tcactttcag aagaacctta agaaaacctt
    29941 aagaggcatt gtttaggttt tgtttaagtt aatcgaccat actggagatc gtcagaaaat
    30001 atttccagga gatggcatga ttcgcttatc tgaacaaagt cccctgggca ccggaagaca
    30061 tcggaaatgt tatgcgcatc cggaagatgc ccaacgctgt atcaagattg tctaccatcg
    30121 tggcgatggt ggcgataaag agatccgccg tgagttaaag tactacgcgt atcttggtcg
    30181 ccggttaaaa gactggagtg gaataccgcg ctatcacggt accgttgaga cggattgcgg
    30241 aaccggttat gtctacgatg tgattgcaga ttttgacggc aaaccctcca ttacgctgac
    30301 cgaatttgct gaacaatgcc gttacgaaga agacattgca caactgcgcc agctactgaa
    30361 acagctgaag cgttatttgc aggataaccg tatcgtgacg atgtcgctga agccgcagaa
    30421 tatcctctgt caccacatca gtgagtcaga ggttatcccg gtcgtctgcg acaacattgg
    30481 tgaaagcaca ttgattccac tggcgacctg gtcgaagtgg tgttgtctgc gtaagcaaga
    30541 gcggttatgg aaacgattta tcgcccaacc ggcgctggct attgccctgc agaaagatct
    30601 gcaacctcgt gagagcaaaa cgctggccct cacttcgcgc gaagcttaat ccagctggtg
    30661 ttgttgcata aacggctcac cgcctaactg atacatctgc cgtaaaatcc acgcctgacg
    30721 gctacgcacg tagcccgatg gcgaggagac tttgaaacga agtggattag gtaatacagc
    30781 tgccagtaat gcagcttccg accgggtaag tttgctcgcg ggtttgtgga aataacgttg
    30841 tgccgcagct tcgacgccaa acacaccgtc gccaaattcg gcgatattca ggtaaaccgt
    30901 caggatacgc tttttgctcc agactgtttc tatccccagc gttaatccag cttccagccc
    30961 ttttcgtacc cagctacgcc catcccataa aaagagattt ttggccgtct gctgagaaat
    31021 cgttgaagca ccgcgaatac ggttttcatt gcgctcgttg tgcgccaggg ctttctcaat
    31081 ggaagcgaca tcaaagcccc ggtgctcagg aaatttctga tcttctgcgg caatcaccgc
    31141 cagtcccatc cacggcgaga tttgatccat actgacccag tcagaatgtg ccacgtaacg
    31201 aaaattgcca tgcagccagg cgctgacctg tcgctcgacc attaccgctg agaagggaac
    31261 aggcgcaaca ctaaacaacg cgatgccccc gccccagaaa acggcgagga caaccattaa
    31321 ccgcaaaaga aaacggcgaa cgaaactaaa caccgttaag cggcttttac tcattcagcc
    31381 agaaccagca cgcgggaaac cagcttatca atgccgctcg ccgcttctgc aatgttctgc
    31441 gccagcatat atgctggggt ggtgacaatc ttattgtctt catcaaccac gatatcatcg
    31501 acaggacagg gcacatgctc cgcgcccatc tcttccagca cttctgcggt atcgatatca
    31561 gtaccgatgg tcaaacgcag cgggaaatcg aaaattttcg gcagcatcgc cggggcaata
    31621 cacataaaac caagcggttt tccggcctga tgcatcgctt gtgccagcgc ctttaattca
    31681 cggtcaacgg tgcattcgct accaagagtg gcaaaattgc ttaaattctt cgccgcgcca
    31741 aacccccccg gcacaatcaa cgcatccagt tcagcggcat cggcctgggc cagaggacgg
    31801 atttcaccgc gcgttattcg tgccgcttca atcagcacgt tgcgcgtttc cgtcatcgct
    31861 tcgccagtta aatggttgat aacatcaacc tgctgcttat ccggtgcaaa gcagaccgcc
    31921 tgcgcaccgc tgcgtgaaat agctaacaac gtcaacaccg cttcatgaat ttcagaaccg
    31981 tcatagacgc cgcatccgct cagaattacg ccaattttct tcattgtgat catcctttcg
    32041 caattgactg aaacacatta atttttttaa taaaaatggt acgcatcaca catttaactg
    32101 attcatgtaa caaatcattt aagttttgct atcttaactg cgtgcggcct gaaaaacagt
    32161 gctgtgccct tgtaactcat cataataatt tacggcgcag ccaagatttc cctggtgttg
    32221 gcgcagtatt cgcgcacccc ggtctagccg gggtcatttt ttagtggctt ttgccaccca
    32281 cgctttcagc acttctacgt cgtgacgcca ctcttctttc atctcttcaa tccattcacc
    32341 gacgttatct tcccaggcag gaaggtcagg agactgaatt tgctgaccca gctgttgcag
    32401 atggcgtaac cccactgacc ccgccgcacc tttaatttta tgtccttcct caacaatgcc
    32461 ttttttatcc tgcgccgtca gattcgactc cagcacgctg acatagcccg gcatcatctt
    32521 ctcaaacacc gctaacccgt cggtgatcag cttcggtcct acaagttcga gatactgttc
    32581 cagcatggga atatcgagca atgcttctga tttactgttc tcttctgtcg tcaccgtact
    32641 ctcctcatca tcctgggtat cccagaattt cttgatcatc gcggttagcg ccggaaccga
    32701 aagcggctta ctcagcacat catccattcc agcattgagg tactcttgtt tgtctttcag
    32761 cacgttagcg gttaaggcca ccagcggcgg taaatcctcg cgcggataac gcttcgtcag
    32821 ttcacgagag atatccagcc cggtcatatc tggcaactga atatccagca acaccaggtc
    32881 gtattcgccc ggtttaaaca tctccagcgc cgccttgccg gtcatggcga catcaacgct
    32941 gttacctaat ttttccagca cagaacgcgc aacaatcacg ttcagttcaa tgtcttccac
    33001 cagcagcaca ttcagcgccg gtaaaggcat atcgtcttca tcaaacgcat catcgacctc
    33061 ttctgctacc gacggtgcgt ggatcgtcaa cgtaaaggtt gaacctttgc cctgttcgct
    33121 ggtaaccgta atatcgccgc ccatattttt cgccagacga cgagaaacgg ccagaccaat
    33181 accggtgccg gtggcaggtt taccgccatg actgtctttc acctggtaat acatggcgaa
    33241 aattttatcc agctcatcct gcggaatgcc gataccagag tcttccactt caaaatgcag
    33301 catatcgcct tcatcgtagc gcacgcgcac ggtaacctgg ccttgctggg tgaatttgac
    33361 ggcgttactg atgaggttcc acaggatctg ccgtaaacgc gtcccgtcgg taatgacctg
    33421 atgcggtaat ggcagcgtcg gctccaggtt aaagcgcaat cctttttgtt gcgcctgcaa
    33481 tgcggagaga ttttccagat cggcaaggaa gctggtgaaa tcaaccggtt gattatcaag
    33541 ctggaccttg cgccgttcca tcttatccat gtcgataata tcgttaaaga tattccccag
    33601 cgtgacggcc gaaacatgga tggtcttgag atatttttcc tgctcggcgg tgagttcggt
    33661 atccagcaga atgcggctca gaccgacgat accgttcagc ggtgtacgca attcgtgact
    33721 gatggtggag ataaacgtcg ttttgtcgcg gctggcccgt tcaagcgcat cctgataccg
    33781 cttacgctcg gtaatgtcgc gaccaaagcc catcaaaccg tgacgtttac ccacgcggtc
    33841 gtagtacggc actttacgga tttcaaagca ggctttgcgc ccgtccgggt aatccagcca
    33901 ctgttcatag gtcagtgaca cattatgacg gaacactttt tcatcggttt caatgacttt
    33961 tgcggcggct tccggtgagt aaacatcagc aggtttcagg tgaaccagtt gtttttcgct
    34021 ttttccggtc agcagctcca tcgcgcggtt acagccggaa aactctttat cttcgttacg
    34081 ataaaaaacc aggtcgggtg aagcatcaag gaaggaacgt aagaatgagg attgctgctc
    34141 gagctgaatt tgtgtctctt cgcgctcttt gatttcaatt ttcagttggc cgaaggtttc
    34201 ctgcagttct gcttccgctt tttcacgaac ggcaatttcc tgatttagct gggcaatatt
    34261 atcttttaac tgaacgttga ggctcaaatc gcgctcgcgc atctcctcca gtttttgcac
    34321 cagccgtgac agacgttgtc gtgactcctc cagttgctcg acgaccaccg atagaaagta
    34381 gaccgcccac ggcgtaatca gcaaaccaaa gaagatagaa cgaataacat caatgctttc
    34441 gacctgacca tgcagcacca tggttaccgc catttgtacc acaatggcaa gaacgacgag
    34501 ggccagcgcc agcaacattg agaagcgcac cagacctaac ttcatcatca ggtcaacata
    34561 atactgcgcc agcagacgaa tttgcttcat tagggaattc cttcacgaca acctgcccca
    34621 ataataccca attctgacag ttacgttata aattgtgtga gaaatgcgga attcccctca
    34681 acgacctact ccgttggagg tagccacgga cgtcccagcg ccgatccctg tacgccatgt
    34741 tcattcagat agcgatccag ctcgaccatt cccgtccatc gattttcgca ccacagcgga
    34801 gcaagcagcg tcgggcgacg ggcgctggcg gaaatgcggt ggtagatcac ttccggtggc
    34861 gtatggcgaa tcatttctcc ggcagtgagc gtgtaatcct ccagttcaat accgttcaaa
    34921 cgccccgctt cccaggcttt cgccataatg ctgcctttca caatatgcag cggatgcagc
    34981 tttatgccgt ccacgccggt ttcaaccact cgctccagcg tttgcaaaca ttcagcctgc
    35041 ccttcaccag gcaggccgac aattaagtgg gaacacacct tcagcccgcg ctgacgtgcc
    35101 agctgggttg tacgctgata acaggcaaaa tcatggccgc ggttgatgcg atgcagtgtt
    35161 ttgtcgtggg cggtttgtag ccccagctcc agccacactt cgtaaccctg gtccttatat
    35221 tcgcaaagca gatccagcac cgcatccggc acgcagtccg ggcgggtacc aacacacaaa
    35281 ccgacaatat tggcctggct caccgcctgc tgatacatag aacgcagcac ctgaacttcc
    35341 gcaaaggtgc tagtatacgc ctgaaagtag gccagatagc gtttagcgcg gttaactaaa
    35401 ttcgcctggt gcgccagttg ctcggcaatg gaacgatgct gctgcgcttc atcggcaaac
    35461 gaggcaacat tacagaatgt gcagccacca cgcccgatgg taccgtcacg gttagggcag
    35521 ctaaaaccgc cgtgcagcgt cagcttatgc accttttgcc cataacgacg ggtgagatca
    35581 ccaccaaaca tattgactaa tttctgtaac tgcataatct gatagaccgc gccttgaaaa
    35641 gaggccaaag cctgccattt ttagctcaat tcggcgatga cctggatcaa tcgtcccggc
    35701 ctgcttttat caactgcata atcaatcaaa attaccgaaa tttcatgcat aatcacataa
    35761 atcacttttg cttatcttgt gtcagatttt tttatctcct tatggatttt aggcaaaaac
    35821 agtagcatga aacgtcatta ccaattaagg cagtataaaa tgctggtttt ctcgtcagtt
    35881 caaggtagga taagggttaa cacgccttta tgacagtcag gaattgactg tttctctaac
    35941 gacttccctt ttagccttaa agataaaatt cattttaatt tcagttgctt aataaagaat
    36001 tttgcgctaa agcacatttc tgtaccaata agcttgccat ttgacctgta tcagctttcc
    36061 cgataagttg gaaatccgct ggaagctttc tggatgagca gcctgctcat catatttatg
    36121 cagtaattga gatcccctct tcaccgtatt aaccgatgcg aaaaggacaa caagggggcg
    36181 aatacgaggc gcgcgtatga cacgcaaccc ccgtcgccac gctctttctg tgcccgtgcg
    36241 cagcggttcg gaagtggggt tcccgcagag cctgggggag gttcacgata tgttgtacga
    36301 taaatccctt gagagggata actgtggttt cggcctgatc gcccacatag aaggcgaacc
    36361 tagccacaag gtagtgcgta ctgcaataca cgcactggcc cgcatgcagc accgtggcgc
    36421 gattctcgcc gatggtaaaa ccggtgacgg ttgcggcttg ctgttacaaa aaccggatcg
    36481 cttttttcgc atcgttgcgc aggagcgcgg ctggcgttta gcaaaaaact acgctgtcgg
    36541 gatgctcttc ctgaataaag atcctgaact cgcggctgcc gcacgccgca tcgttgaaga
    36601 agagctgcaa cgcgaaacct tgtcgattgt gggctggcgt gatgtcccca ctaacgaagg
    36661 cgtgctgggt gaaatcgccc tctcctctct gccccgcatt gagcaaattt tcgttaacgc
    36721 tccggcaggc tggcgtccgc gggatatgga gcgccgtctg tttatcgccc gccgccgcat
    36781 tgaaaagcgt ctcgaagccg acaaagactt ctacgtctgt agcctgtcga atctggtgaa
    36841 catctataaa ggtctgtgta tgccggcgga tctgccgcgc ttttatctgg atcttgcgga
    36901 cctgcgtctg gaatcggcca tctgcctgtt ccaccagcgc ttctccacta acaccgtacc
    36961 gcgctggccg ctggcgcagc cgttccgcta cctggcgcat aacggtgaaa tcaacaccat
    37021 caccggtaac cgccaatggg cgcgtgcgcg tacctataaa ttccagacgc cgcttatccc
    37081 tgatctgcac gacgccgcac cgttcgtcaa cgaaaccggc tctgactcca gttcgatgga
    37141 taacatgctg gaactgctgc tggcaggcgg gatggatatc atccgcgcca tgcgtctgtt
    37201 agtgccaccc gcctggcaga acaacccgga tatggacccg gaactgcgtg ccttctttga
    37261 ctttaactcc atgcatatgg agccgtggga tggcccggcg ggcatcgtga tgtccgacgg
    37321 tcgttttgcc gcctgtaacc tcgaccgtaa cggtctgcgt ccggcgcgct acgtcatcac
    37381 caaagataag ctcatcacct gcgcctctga agtcggtatc tgggattacc agcctgacga
    37441 agtggtcgaa aaaggccgcg tcgggccagg cgaactgatg gttatcgaca cccgcagtgg
    37501 gcgtattctg cactcggcag aaaccgatga cgatctgaaa agccgccatc catataaaga
    37561 gtggatggag aaaaacgtcc gcagactggt accgtttgaa gatctgcccg atgaagaagt
    37621 gggtagccgc gaattggacg acgacacgct tgccagctac cagaaacagt ttaactacag
    37681 tgcggaagag ctggactccg taattcgcgt actgggcgaa aacggtcagg aagcggtcgg
    37741 ttcgatgggc gatgataccc cattcgccgt gctctccagt cagccgcgca ttatttacga
    37801 ctacttccgc cagcagtttg cccaggtgac taacccgcca atcgacccgc tgcgtgaagc
    37861 gcatgttatg tcgctcgcca ccagtatcgg tcgtgaaatg aacgtctttt gcgaagcaga
    37921 gggccaggcg caccgtttaa gctttaaatc gccgattctg ctctactccg atttcaaaca
    37981 gctcacgacg atgaaagagg agcactaccg cgcagatacg ctggatatca cctttgacgt
    38041 cactaaaacc acgctcgaag cgacagtcaa agagctgtgc gacaaagccg aaaaaatggt
    38101 acgtagcggc accgtgctgc tggtgctctc cgaccggaat atcgctaaag atcgcctgcc
    38161 ggttccagcc ccgatggcgg ttggcgcgat ccagacccgt ctggtcgatc aaagcctgcg
    38221 ttgcgatgcc aacatcatcg tcgaaaccgc cagcgcccgc gatccgcacc acttcgccgt
    38281 gttgctgggc ttcggcgcga cggctattta tccatacctt gcctatgaaa cgctgggccg
    38341 cctggtagac acccatgcga ttgccaaaga ttatcgtacc gtgatgctca actaccgtaa
    38401 cggcatcaac aaaggcttgt acaaaatcat gtccaaaatg ggcatctcca ccatcgcctc
    38461 ttaccgctgc tcgaaactgt ttgaagcggt cggtctgcac gatgatgtag tgggcctgtg
    38521 cttccagggg gcggtcagcc gcattggtgg ggcgagcttt gaagacttcc agcaggatct
    38581 gctgaacctg tcgaaacgtg cctggctggc gcgtaagccc atcagccagg gcggcctgct
    38641 gaaatacgtc cacggcggcg aataccacgc ttacaacccg gacgtggtgc gcacgctgca
    38701 acaggcggta caaagcggcg agtacagcga ctatcaggaa tacgcgaagc tggttaatga
    38761 gcgtccggca accacgctgc gcgatctgct ggcaattacg ccgggtgaaa acgcggtcaa
    38821 cattgctgat gttgaaccgg caagcgaact gtttaaacgc tttgataccg ccgcgatgtc
    38881 tatcggcgcg ttaagcccgg aagcccacga ggcgctggcg gaagcgatga atagcatcgg
    38941 cggtaactcg aactccggtg aaggcggcga agacccggcg cgctatggca ctaacaaagt
    39001 gtcgcgcatc aagcaggtgg cttctggtcg cttcggcgtt actccggcgt atctggtcaa
    39061 tgccgacgtc attcagatta aagtcgccca gggcgcgaag ccgggcgaag gcggtcagtt
    39121 gccgggcgac aaagtcactc cttacatcgc caaactgcgc tattcggtgc ccggagtgac
    39181 gctgatctcc ccgccgccgc accacgatat ctactctatc gaggacttag cgcagctcat
    39241 tttcgacctc aagcaggtta acccgaaagc gatgatctcc gtgaagctgg tttccgaacc
    39301 gggcgtaggc accatcgcga ctggcgtggc aaaagcttat gccgatttaa tcaccatcgc
    39361 aggctatgac ggtggcaccg gcgcaagccc gctgtcgtca gtgaaatacg caggttgccc
    39421 gtgggagctg gggcttgttg aaacccagca ggcgctggtt gccaatggtc tgcgtcataa
    39481 gatccgtttg caggtcgatg gcggcctgaa aaccggtgtt gatatcatca aagcggcgat
    39541 tctcggcgca gaaagcttcg gcttcggcac tggcccaatg gtcgcgctcg gctgtaaata
    39601 tctgcgtatt tgccacctga acaactgcgc aacgggtgtg gcaactcagg atgacaaact
    39661 gcgtaagaat cactatcacg gcctgccgtt caaggtgacg aattactttg agtttatcgc
    39721 ccgtgaaacc cgcgagctga tggcacagct gggggtaacg cggctggtgg atctgattgg
    39781 tcgcaccgac ctgctgaaag agctggacgg tttcaccgcc aaacagcaga aactggcgct
    39841 gtcgaagctg ctggagaccg ccgaaccgca tccaggtaag gcactctact gcaccgaaaa
    39901 caacccgccg tttgataacg gcctgctgaa cgcgcagttg ctgcaacagg cgaaaccgtt
    39961 tgtcgatgaa cgccagagca aaaccttctg gttcgatatc cgcaataccg atcgctccgt
    40021 gggcgcgtcg ctttcaggct atatcgccca gacgcacggc gatcaggggc tggcagccga
    40081 tcctatcaaa gcgtacttca acggcaccgc aggccagagt ttcggtgtat ggaacgcggg
    40141 cggcgtggaa ctgtacctga ccggggatgc caacgactat gtcggtaaag gcatggcggg
    40201 cggcttaatc gccattcgtc ctccggttgg ttccgccttc cgcagccatg aagcaagtat
    40261 tatcggcaac acctgcctgt atggcgcgac cggtggtcgt ctgtatgccg caggccgcgc
    40321 gggtgaacgt ttcggcgtgc ggaactccgg tgctatcacc gtggtagaag gcattggcga
    40381 caacggctgt gaatatatga cgggcggtat tgtctgtatt ctgggtaaaa ccggcgttaa
    40441 cttcggtgcg ggcatgaccg gcggcttcgc ttacgttctc gatgaaagcg gtgatttccg
    40501 caaacgcgtt aacccggaac tggtcgaggt cttaaacgtt gacgatctgg cgatccatga
    40561 agagcatctg cgcggtctta tcaccgagca tgttcagcat actggctctc agcgcggtga
    40621 agagattctg gcgaactggt caaccttcgc cactaaattt gcgctggtta aaccgaagtc
    40681 cagtgatgta aaagcactgc tgggtcaccg tagtcgtagc gcagcagagt tgcgcgtgca
    40741 ggcgcagtaa ggggtagcaa caatgagtca gaatgtttat caatttatcg acctgcagcg
    40801 cgttgatccg cctaagaaac cgctgaagat ccgcaaaatt gagtttgttg aaatttacga
    40861 gcagttttcc gaaggccagg ccaaagcgca ggctgaccgc tgcctgtcgt gcggcaaccc
    40921 atactgcgag tggaaatgtc cggtacacaa ctacatcccg aactggctga agctcgccaa
    40981 cgaggggcgt atttttgaag cggcggaact gtcgcaccag accaacaccc tgccggaagt
    41041 ttgcggacga gtctgcccgc aagaccgtct gtgcgaaggt tcctgcactc tgaacgatga
    41101 gtttggcgcg gtgaccatcg gcaacattga gcgttatatc aatgataaag cgttcgaaat
    41161 gggctggcgt ccggatatgt ccggcgtgaa gcaaaccggt aaaaaagtgg cgattatcgg
    41221 cgcaggcccg gcaggtctgg cgtgtgcgga tgtcctgacg cgtaacggcg taaaagccgt
    41281 tgtcttcgac cgtcatccag aaattggcgg gctgctgacc ttcggtattc cggccttcaa
    41341 gctggaaaaa gaggtaatga cgcgtcgccg tgaaatcttc accggcatgg gtattgaatt
    41401 caaactcaat accgaagtgg gccgcgacgt gcagctggac gatctgctga gtgattacga
    41461 tgccgtcttc cttggcgtcg ggacttatca gtcaatgcgc ggcgggctgg aaaacaaaga
    41521 cgccgatggc gtgtacgcag cgctgccgtt ccttatcgcc aacaccaaac agttaatggg
    41581 ctttggtgaa acccgcgacg aaccgttcgt cagcatggaa ggcaaacgcg tggtggtcct
    41641 tggcggtggc gacactgcga tggactgcgt gcgtacgtcc gtgcgccagg gagcgaagca
    41701 cgttacctgt gcctatcgtc gtgatgaaga gaacatgccg ggttcccgcc gcgaagtgaa
    41761 aaacgcgcgg gaagaaggcg tagagttcaa attcaacgtc cagccactgg ggattgaagt
    41821 gaacggtaac ggcaaagtca gcggcgtaaa aatggtacgt accgaaatgg gcgaaccgga
    41881 tgccaaaggc cgtcgccgcg cggagatcgt tgcaggttcc gaacatatcg ttccggcaga
    41941 tgcagtgatc atggcgtttg gtttccgtcc acacaacatg gaatggctgg caaaacacag
    42001 cgtcgagctg gattcacaag gccgcatcat cgccccggaa ggcagcgaca acgccttcca
    42061 gaccagcaac ccgaaaatct ttgctggcgg cgatatcgtc cgtggttccg atctggtggt
    42121 aaccgctatt gccgaaggtc gtaaggcggc agacggtatt atgaactggc tggaagttta
    42181 agctctgtcc cagcgccgcc tcctcagaaa agagtcggcg ctgaaattct cctttctttc
    42241 tggaaagcgc ctcgcataat ctgaagaaaa ccaatgtaat acgctcatct ggattgttac
    42301 cggtagatgc ccggcgtata gctgattcca ttattcaacg cagcgccata taaagggaca
    42361 gataatggaa tcgctctcag agagaacctc aacaggctac cagcaaatcc acgacggtat
    42421 tattcacctg gtcgatagcg cccggacgga aacggtacgt agcgttaacg cgctgatgac
    42481 cgcgacatac tgggaaattg gccgacgaat tgtcgaattt gaacaaggtg gcgaggcaag
    42541 ggctgcgtat ggtgcgcagc taatcaagcg actatcaaag gatttaagtc taaggtataa
    42601 gcgtgggttc tctgcaaaaa acttacgcca aatgaggctt ttttacctct tttttcaaca
    42661 tgttgaaatt cgccagacag tgtctggcga attaacacca ttgggaattc cgcagacacc
    42721 atctgcagaa ttcccatcgg caaagatttg gcagacgctg tctgccaaat tgagaggctg
    42781 tttgatattt ccacagcttt tgtattgcat ctcctatttt cggtttgtat attcatgcaa
    42841 ataaacgaag gaaagttgcc atgatttaca ttgaacagct tgaattaatc cataaaagtg
    42901 gtgatgtgtt gtatccagta aaaataacca gaaaatcatc aggaaaaact gccttccatc
    42961 ttgttccatt cggcttaaat aagactcacg accttctaga ggtggaagat gcttcagaag
    43021 caattcggct ggtgattgat gaacgtcatt ccattcgctg cagtacactt acagcaacta
    43081 ttacgaataa aaagggcaag cgaattaagc ggacaggtat atacagtatc aagggtgtta
    43141 acataaaaga atacaacgtc aggtaatggc acagagcggt ccgtcagttc aggtttggct
    43201 ctgtgccaaa gatgggtcag gtcacacctg atctaataaa tttaagccat taaatcagcc
    43261 ttaaccttca ccaccacctt tttaatctca cccggctcgc cgacaacgca tcctggttta
    43321 tgcggttcac ttggcataaa cacggcgaac attcccggtt ttaagatgat ggcttgctcg
    43381 ttatcaatgg tgctgcaaag ctgataatca tcctcatggt ggaactcttc acactggcgc
    43441 gcagtgcctg ccatgccaaa cagaatccgt tcctcaccgt ttaataacag ctggatatca
    43501 atgtattgct cgtgcaattc cgcttttttc tcgacgggcg attgagtgtt aaacgtcatg
    43561 acattcataa agatattgtc gccctgtaat tcgtaacgac caggcgcttt ttcttgcggt
    43621 ctggcagcta atgccagcgt taacgcgtcc tgtaacgcag gatgtaaccc agcagacggt
    43681 aatgactgta cttcacccat catcataatt tttctccctg ggccaacagc gcagccccaa
    43741 gtaaacctgc atcgtggcgg tagtgcgccg ccagtaaatc aacatgaaat gccgctggct
    43801 cctgcgccag atacgtttcc accaacgcca gatacccttc tgccagacca acgctgccac
    43861 cgaccaccac gcactggcaa tcagttgtgg ctttaatatc agcgatcagc cttgccagca
    43921 catgtgcgga gcggtgaatc agttgctgcg cctgctcgtc gccctgcccg gcgcgtgtga
    43981 aaatagttct cgcatccgcg cccatgagtt caccttgcgc tgccgctgca ataccgcgac
    44041 cagaagcaat cgcttccacg caacctgtgc gtccacagcc gcagactggg ccgtgtggat
    44101 cggcaagcgt atgcccgatg tgccccgcca gaccgccagg gccggtaagc agtttaccgc
    44161 cgctcactac accgccgccg acgccagtgg aaacggtgat aaacaccata tcggttatat
    44221 cgccttccag cgcctgatac tctgcccatg ctgcggcctg cgcgtcgtta atggcaatgg
    44281 tcggcaaatt ggaaagttgt tccagcgttt tgactaacgg aaagtgtagc aatccaccaa
    44341 gattatgcgg attcagcgcc agcaagctgc cgtcgcgaat aattccggtt gaagcgatgg
    44401 caacctgctg cgcatgagct tgcaacgggg cgactaacgc ggctaaggca tcacgcaacg
    44461 cctgcggagt ctggctggct ggtgtcggaa gttctcggcg atcgcggatc tgcccgtcag
    44521 cgccaatcag cgcggcggca agtttagtac cgccgatatc aatcgccaac gtggtcatag
    44581 caccgccttt ttcatcgctg tgttgtacca ctgacaaatg tgttcaagac gcgtaatggc
    44641 agaaccgacc gtcaccgccc acgcgccgtg gcgcatcgca tctgccgcct gagcaggcgt
    44701 gttgtaacgc ccttcggcaa tcacccgaca tccggcgtcg ctcaacgttt tcaccagcgc
    44761 cagatccggc tcttctggcg tttcaggcgt ggtatagcca gaaagcgtag tgccaataat
    44821 ttcggctccc agcttttggc atgccaggcc gtcttccggc gttgagcagt cggtcatcgc
    44881 cagtaaaccg tgatggtgaa tacgtgccag cagcgtttca acaggcaccg gacgcgggcg
    44941 gtcggtgccg tcaatggcga taatgtccgc gcccgcctgc gccagcgcat caacatcttc
    45001 aatataggcc gtgatgcgta ccggagaatc ctccagatcg cgtttcacaa ttccaataat
    45061 cggcacgctc accaccgcac gcgtggcttg cagatttgcc acaccttcaa tgcgaatggc
    45121 aaccgcgccc gcctgttctg ccgctaatgc catggcagcg acgatttcgg gtttatcgag
    45181 cgggctgtcc ggaaccggct ggcaggagac aatcaggcca ccgttagcag cgattttttg
    45241 atccagttgt gcaagtaacg acatacatct tcccttagcg aaaggcccgg tacagagacc
    45301 gggcaacagg attaactttt ggttttgact aaatcgtttt tggcgctgcc aaatggcacg
    45361 gcaccgctaa atggtttgcc gtcgatagcg tcatgagtac gcaatgcttc cgggcgcagc
    45421 caacgctgaa cgcgggaagg catatccaga ccaatcagca ggatcaccac aaatgtcaga
    45481 ctgaacgata gcgatgccag cgcagtaccc agatccagac gttgagcgat caacgcgccg
    45541 atgattgggg ccagtgcgcc gcccaatgcg ccaacgttgt aggtaaagcc caggcccgct
    45601 gcacgctggt cggtatcgaa ataaccgcca atcagtttcg gtaagatccc ggcgatccct
    45661 tgtccaagca tttgctggaa gaacagtaac agaccgagca cccagacgtt tgcgccacca
    45721 atcgcaaata ccggaataat caacagctgc gaggccaaca ggctacaaac gtaggctttg
    45781 cgggttccca gccagtcacc gaggaagccg ctgacacagc accccaccgc agccccaaag
    45841 ccgctaaaga acagcacatt ggcgacagta tgcgggttat aagccagatc ggttttcaga
    45901 tacgttggca gcagcgcctg aatcggccat gagtagagga aagcaaacaa cacgaccacc
    45961 atcagcatta cgcccgttgg ccagcgttta cccgtacttt gcaccataaa gctgataaag
    46021 attgcggcgc ataacagccc aagaacagcg acgatcgcgg cattttgcag gttaccggcg
    46081 aagcaaaacc acagcgcagt agccgccgcc agtgtcatta cgatattggc aatgcgatgt
    46141 tcaccacggt agagaatatc taccatcgtg cgtactggtg ctttacctgc atgcttctct
    46201 ttccagtctt ccgcttccgg gatgttttta cgcagccaga gagcaaagat gataggcaaa
    46261 atgccgataa agaacagcgc acgccagccc cagaccggaa ccaccaggct atagacctga
    46321 gcggcaacga cggcccccac agagaagcct gaaatcagaa aaccactggc tttgttacgc
    46381 agatgttttg gccagctttc aatgacatag gtggcgctgg aaccgtattc acccgccatc
    46441 cccatgccga tgaccagacg cgcgataaac atggtgatgt agcctggcgc aaagccgcag
    46501 gccagcgtcc cggccgagaa gagaacgatg ctggtgacca ttgccagacg acgcccgtag
    46561 cggtcaccca tagcgccgag catcaggccg ccgaaccagc gagagataaa ggctgcggag
    46621 atcagacttg ccgcctgcac cgtcgtcagc ccgaattcac cctgtacttc ggtgagtacc
    46681 agggcgatta aaacgaaatc aaaaccgtca agcagatatc ccaaccaggc agcggaaaat
    46741 gcgcgccatt gtgcacggtt gagatggcga taccacggga tattctgggt tgtagtactc
    46801 attgtgagtc tcccgcggtg ggcgatgccc acacgctttg gtataaaaat tgtagggtac
    46861 agatgcgttt atttcccctc acccggtagg ggcgagcgag gggaaacaac tcacccgcgc
    46921 tcttgcatca actgctgggc cagcgccttc agttctggca gatatttttc atctaccggt
    46981 ccaaacggtt tgcggcacag cggcacagaa acgacatcca tataatggag gacagttttc
    47041 aggccgcgga atacgcccgt tttgatcagt aaatcaatga ctttattgca ttcagtttgc
    47101 agtttctgcg cggtctggat atcgccttct ttcagcgcct taacgatccc ctgatagcgc
    47161 cagcccatga tgttgtaggt actaccgata ccaccatcag cgcccgccag cagaccagag
    47221 gcgaagattt cgtcgtaacc gttatagagc acaagatcag gatgttcacg acggatctgc
    47281 tccatctgat agagatcgcc agaggtctgt ttcagcgcac ctacgccagg caatgtaaca
    47341 agtgtgttga tctgatccag ggtcagtttt accccactca gggctggaat gttgtacacc
    47401 accatcggca aaccatccgc cgaatcaata attgcccgat agtgatcgca gtgttcttca
    47461 aagctgaaag gatagtagaa cggcgtgacg gcggagacgg catcgaagcc ataacgttta
    47521 gccgatgccg caagttgttg gctttcggcg gtgctgacgc aaccgacgtg ggcgatgagt
    47581 ttaatcttac ctttcgcctc ttcggcgacg atttccagta cctgttcacg ctcggaaagg
    47641 ctttgtacaa aggcctcgcc ggtcgaacca cccacgtata aaccgtcgat gccctgctga
    47701 atattgaact gaaccaggcg acgcagactc gctttatcca gtgcttgttg ttggtcaaaa
    47761 ggagtcagga gtgcagccat tacgccacgt aaattcgttg ccataaatac ctctgaagtg
    47821 atgcttgtct gataaacgat atacctttat acctgttata ccagatcgat taagcaacac
    47881 cccatacaga aagcttataa tgcgatctgc ttcactaaag tggcattatt tctttttgtt
    47941 ggtggtctga ccgaaagcgt gccaggtagc agagacgctg ttgagatgcg attgcaacgc
    48001 acgatcggct tcgtcaggat catgacggcg gatcgcatca acgatcgcaa tatgctgttg
    48061 ataactaacg ttgttatgtt cgtgcagtgc ctgatcggta accgttgggc gtgcggcaat
    48121 aagccagtcg agcagggcaa cgtggatcgc catgaagatt gggttaccgg ggatctccgc
    48181 cagcacgcgg tggaaatcaa cgtctgaacg aatgaatgcc gcgttgttat ccagcgactg
    48241 actgttgatt tccagtgctt ttgccagcaa atcgatttgc tcatcggtgg catgttcagc
    48301 cgcatagcgc accagactgg attcaaagaa cagacgtaat tgttcgaaat gggcaatccc
    48361 accgggatga gaaaggaaat ctttcgccat gccggaaagc tcaccgatga tagtgtccgc
    48421 agaaggacgc gagacgcgag cgcgttcgcc gttgtttatt tgcaccagac ctttgcgttt
    48481 taacgctgcc agcgcttcac gcaccgaagg acgcccgacg ttaaagaacg ccatcagttc
    48541 gcgttcagac ggtaattgtt caccttcgcc aaattcacga cggcggatca tctgttccag
    48601 ctcttcttcc accatttcgg agagtttttt acgcgccagc gggcggctac gcaagttgcg
    48661 accaattgca ggtgaagaat cttcggtttg cgaatcaaat gcgttcataa ggcccattct
    48721 gtaaggtcag tgtgattaac atcatcagtg acatcctatc acaggattga gagtagggga
    48781 aaatggcagg tttttctctt tgtgcctcat cattaccata attaacggaa taattaacta
    48841 ttgcgaaaaa ttaatgtaac gcagataaaa acatcccgtt tgaattattt ataagactat
    48901 tcacgagcat tatgaatatt atgaatgcgt tcttgcaaaa taatcataag cgcatatttt
    48961 ttaatgaaaa attacctcac ctacaattaa aaacacgaca tccgcaccat aaatagactt
    49021 gcaaaaaata taacatcatt gttttcaatc tgccgtttat gggattgacc gttttctttt
    49081 gacacggagt tcaacaatgt tcggcataat tatatctgtc atcgtattaa ttacgatggg
    49141 ctatttgatc ctgaaaaact acaaacctca ggtggtgctg gctgccgcag gtatcttcct
    49201 gatgatgtgc ggtgtctggt tagggttcgg tggtgtactc gagcccgcca aaagcagcgg
    49261 ctacttgatc gtcgatattt ataatgaaat cctgcgcatg ctgtccaacc gcattgccgg
    49321 attggggcta tcgattatgg cggtgggcgg tatgcccgct acatggagcg cataggggcc
    49381 agtcgcgcga tggtgagctt gttaagccgc ccgttaaaac tcattcgctc accgtatatt
    49441 attctgtcgg caacttacgt catcggtcaa atcatggcgc agtttattac cagcgcctcc
    49501 ggtctgggta tgttgctgat ggtcacctta tttccgacac tggtgagtct gggagtaagt
    49561 cgtctctctg cggtggcggt tatcgcaacc acaatgtcca ttgagtgggg aattctggaa
    49621 acgaactcca tttttgcagc ccaggtcgcg ggaatgaaaa ttgccactta cttcttccac
    49681 taccagcttc cggtcgcctc ttgcgtcatt atctcggtgg cgatctccca ctttttcgtg
    49741 caacgcgctt ttgacaaaaa agataaaaat atcaatcacg aacaagcaga gcaaaaagct
    49801 ctcgataatg tcccgccgct ctattacgcc attttacctg tgatgccgtt aatcctgatg
    49861 ctcggctcgc tgttcctcgc ccacgtcggg ctgatgcagt cagaactgca tctggtggtg
    49921 gtgatgttac tgagtttgac ggtgacgatg tttgttgagt tcttccgcaa gcataacttg
    49981 cgcgaaacaa tggacgatgt gcaggcgttt tttgacggca tgggtacgca gtttgccaac
    50041 gtggtaacgc tggtggtcgc gggtgaaata tttgcgaaag gcttaacgac gattggcact
    50101 gtcgatgcgg ttatcagggg tgcggagcat tctggtctgg gcggtattgg cgtgatgatt
    50161 attatggcgc tggtcattgc catttgtgcc attgtgatgg gctctggcaa tgcgccgttt
    50221 atgtcatttg ccagtcttat tccgaatatc gcagccggac tacatgtacc agcggttgta
    50281 atgattatgc cgatgcattt tgccacgacg ctagcgcgcg cggtttcgcc gattactgcg
    50341 gtggtggtcg ttacgtcagg aattgcaggc gtttcgcctt ttgcggtggt gaagcgaaca
    50401 gcgatcccca tggcagtcgg tttcgtggtg aatatgattg ccacaatcac gctattttat
    50461 taagccatta aaagacaaaa caggccacca gggcctgttt ttgtattact tcacaacgcg
    50521 taatgccggt cgaccaccgc gtggtggctg cggaggttca tcgtcaggat gagtgtcatc
    50581 atcgtgatct ggcttgtcgc catcaataac cgacataacg gtttcgttgt ctgccgatgc
    50641 ctcttcatca ttcatgatgc tggtatcttc atcgtaggca gcttcaggct caaacattgt
    50701 gcctgcgcca ttttcacggg cgtagatagc cagcacggca gccagcggca cagaaacctg
    50761 acgcggaatg ccgccaaagc gcgcgttaaa gcgcacctca tcattcgcca gttccagatt
    50821 gccgacagca cgcggcgcaa tgttgagtac gatttgcccg tcacgcgcat attccatagg
    50881 aacctgcacg ccagggagcg tcacatccac cactaggtgc ggcgtgagct ggttatccag
    50941 caaccactca tagaatgcac gcagcagata gggacgacgt ggtgttagct gtgacaaatc
    51001 catacagatt aactccggcc cagacgcatt tcacgttctg cttcagttaa agaagcaagg
    51061 aaagagtcac gctcaaagac gcgggtcata tagcctttca gctctttcgc acccgggccg
    51121 ctgaactcga tgcccagttg cggcagacgc cacagcagcg gagcaagata gcaatcgacc
    51181 aggctgaact catcgctcag gaagtacggc ttctgaccga agaccggcgc aatcgccagc
    51241 agttcttcgc gcagttgctt acgtgcggca tctgcttcag aagctgaacc gttgatgatg
    51301 gtgttcatca gcgtgtacca gtctttttcg atgcgatgca tgtacagacg gctttcaccg
    51361 cgagctaccg ggtaaacagg catcagtggc ggatgcggga aacgctcatc cagatattcc
    51421 ataatgatgc gagattccca cagggtcagc tcacgatcca ccagggtcgg aacgctctga
    51481 ttcgggttga ggtcaatcag atcctgaggc ggattgtcct tttccacgtg ttcgatctcg
    51541 aaacttacac ctttctcagc cagcacaatg cggacctgat ggctatagat gtcagtagga
    51601 ccggaaaaca gcgtcattac cgaacgtttg ttggcagcga cagccatgaa aacctccagg
    51661 tatagtcaga atttttactg ctaccagcca ccaggtggcc agtcagaagt tgtgttaccc
    51721 agtaaggaac gactctcttt gttcgaaaat caaacaaaaa atgagcaata cccgacattt
    51781 gggcagaaaa ttggatgata gtttaccaga ttttgcgacc tttgtggtga gtcgatgccg
    51841 gaaatgggga aaaagagatg cgctttagtc tgaaatagtt gacttagtcc cttattggcg
    51901 atgtggtttt tgttttacct gtctgtcagg tggcagcaaa aagcaacttt ccagttttta
    51961 cgctgattca gattttagct ataaaaaaac ccgccgaagc gggttttttc gaaaattgtt
    52021 ttctgccgga gcagaagcca attaacgttt ggagaactgc ggacgacgac gtgctttacg
    52081 cagaccgact ttcttacgtt caacctgacg agcgtcacga gtaacgaagc cagctttacg
    52141 cagttcagaa cgcagggact cgtcgtattc catcagagcg cgggtgatac cgtgacggat
    52201 cgcaccagcc tgaccagaga taccaccacc tttaacggtg atgtacaggt ccagtttctc
    52261 aaccatgtcg accagttcca gcggctgacg aactaccatg cgggcagttt cacgaccgaa
    52321 gtactgttcc agagaacgtt ggttgattac gattttaccg ttgcccggtt tgatgaaaac
    52381 gcgagctgcg gaacttttgc ggcgaccagt gccgtagtat tgattttcag ccattgccta
    52441 taatcccgat tagatgtcaa gaacttgcgg ttgctgtgcc gcgtggttgt gctcgttacc
    52501 cgcgtaaact ttcagtttac ggaacatagc acgacccagc gggccttttg gcaacatgcc
    52561 tttaaccgcg atttcaatca cacgctcagg acggcgagca atcatctctt caaaggtcgc
    52621 ttgtttgata ccaccgatgt ggccggtgtg gtgatagtac actttgtcag tacacttgtt
    52681 gccggttaca gcaactttgt cagcgttcag aacgatgatg taatcaccgg tatctacgtg
    52741 cggagtgtat tccgctttgt gcttaccgcg caggcgacga gccagttcag tagccagacg
    52801 gcccagagtt ttaccggtcg cgtcaacaac ataccagtcg cgttttacgg tttctggttt
    52861 agctgtaaaa gttttcatta aaagcttacc caataaatag ttacacgttg gtgaacaccc
    52921 aaacgtcttc aattgttgag gttcacacga caaagtccgg caaacctacc ccttcgaata
    52981 gcctatgcca gcacacaaaa agttttggga aaaaactttc ttgtaacgtg gggtcgcagg
    53041 attatagaga agtcggggtc aaagatcgac ccctttttgt gatttgtgac aggttttaac
    53101 ccgccaaatg ctcgcgcttc agatactctt cgctttgcat ctcttgcaga cgtgacaggc
    53161 aacgctggaa ctcaaacttc agccgatcgc cctgataaat ttcatacagc ggcacttctg
    53221 cactcaccac taatttgaca tggcgctcgt aaaactcatc caccagcgca ataaagcgcc
    53281 gcgcttcgct ctccatcaac cgcgtcataa ctggtacatc aaacaacatg accgtatgaa
    53341 agaggcgtga gagcgcaata tagtcatgct ggctgcgggc atcgacacac aaggtggtaa
    53401 aagagacagc aagcgtctga ttctcagcgc ccattgtcgc cagcggtcga tggttgattt
    53461 ctaacgtcgg tgaattttcg cgtttcgctc ccgccagcgc caaccatagt ttatccattt
    53521 gtgcccgggt ttcatcgtgg agtggcgaaa gccacagatg cgcctgagtg agtgtacgca
    53581 gtcgataatc aacaccagcg tccacgttca ttacatcaca atgctgttta atggcatcga
    53641 ttgcaggcag aaaacgcgca cgttgcaagc catttcgata aagttcgtcc ggcggaatat
    53701 ttgacgttgc taccagggta ataccgcggg cgaacagggc tttcatcaga ccgccaagta
    53761 gcatggcgtc ggtaatatca gaaacaaaaa attcgtcaaa acagagcacg tcagtttcgg
    53821 ctttaaagcg atcggcaata atttccagcg gatcggtctg cccctgtaag gcagttagct
    53881 cttcgtgcac ccgcagcata aaacggtgaa agtgcaggcg ctgtttccgc tctcccggca
    53941 ggctttgata gaaaaggtcc atcagccagg ttttcccgcg tcctacaccg ccccacatat
    54001 ataagccacg cactggcgta tgctttgtgt cttcgcgttt accccacagc ttaccgaccc
    54061 gcgccattag cccactcgtc ctgggggctg gtggcctgct attgatgagt tcttgataaa
    54121 taatttccag gcggctgacg gcctcttttt gaacgtcgtc gggttgatgg ctgccttcat
    54181 tgagcgcctt caggtattgc gatgttgggg taacgctttg catgatctta ttattattcc
    54241 ttgaataatc ggtgcgccgt tgttcacggt tgacgaaaaa aaggccgttc tacactacgc
    54301 gatatgcagt cgggattcca cttctgtgga attaacggtt atagtggcat aatcagccgt
    54361 aggcatggag cctgaagcca acaccctacg gaaacaaaag acaacgggag atgttcatga
    54421 cctgggaata tgcgctaatt gggttagtcg tcggcatcat tattggtgct gtggccatgc
    54481 gttttggtaa tcgtaaacta cgccagcaac aggcgttgca gtacgaactg gaaaagaata
    54541 aagctgaact ggacgagtat cgcgaagagc tggttagcca ctttgcccgc agcgcggaat
    54601 tactggatac catggcgcac gactatcgcc agctgtatca gcacatggcg aaaagctcca
    54661 gcagcctgct gccggaactg tctgctgaag caaacccgtt ccgtaatcgt ctggcagagt
    54721 ctgaagccag caacgatcag gcaccggtgc agatgcctcg cgactattct gaaggtgcat
    54781 ccggcctgct gcgtactggc gcgaagcgcg actaatttat ttttcgggcg cagccattgc
    54841 gccctcctct tctctccctc cccgactatc atttaatctg gtgtctcatt gttagccgtc
    54901 tgaaaattca ataacatcaa actgttttga atctcttttc ttatcattca ggtacgagag
    54961 caggaataat gaaaaaacaa acccagctgt tgagtgcatt agcgttaagt gtcgggttaa
    55021 ctctctcggc gtcatttcag gccgtcgcgt cgattccagg ccaggttgcc gatcaggccc
    55081 ctctccccag tctggctcca atgctggaaa aagtgcttcc ggcagtggtg agcgtacggg
    55141 tggaaggaac ggccagtcag ggacagaaaa tcccggaaga attcaaaaag ttttttggtg
    55201 atgatttacc ggatcaacct gcacaaccct tcgaaggttt aggttccggt gtcatcatca
    55261 acgccagtaa aggctatgtg ctgaccaaca accatgtgat taatcaggca cagaaaatca
    55321 gtattcagct caatgatggg cgcgagtttg atgcaaaact gattggtagc gatgaccaga
    55381 gcgatatcgc cctgttacaa attcaaaacc cgagcaaatt aacgcaaatc gctattgccg
    55441 actccgataa attgcgcgtc ggtgattttg ccgtagcggt cggtaaccca tttggccttg
    55501 ggcaaaccgc cacctctggc attgtttccg cattaggccg cagcgggttg aatcttgaag
    55561 gtctggaaaa ctttatccag acagatgctt ccattaaccg cggtaactcc ggcggtgcac
    55621 tattaaacct taacggtgag ttaattggca tcaacactgc aatccttgcg cctggcggcg
    55681 ggagcgtcgg gattggattt gccatcccca gtaatatggc gcgaacactg gcgcagcagc
    55741 ttatcgactt tggtgaaatc aaacgcggtt tgttaggcat caaaggcacc gagatgagtg
    55801 ccgatatcgc caaagccttc aaccttgacg tgcagcgtgg cgcgtttgtc agcgaagtgt
    55861 tgccaggttc tggctcggca aaagcgggcg tcaaagcggg cgatattatt accagcctca
    55921 acggcaaacc gctgaatagc tttgctgagt tgcgctctcg tatcgcgact acagagccgg
    55981 gcacgaaagt gaagcttggc ctgctgcgta acggcaaacc actggaagta gaagtgacgc
    56041 ttgataccag cacctcttcg tcggccagcg ctgaaatgat cacgccagcg ctggaaggtg
    56101 caacgttgag cgatggtcag ctaaaagatt gcggcaaagg tattaagatc gatgaagttg
    56161 tcaaaggaag cccagctgct caggcaggct tgcaaaaaga cgatgtgatc attggcgtca
    56221 accgcgatcg ggtgaactcg attgctgaaa tgcgtaaagt gctggcggca aaaccggcca
    56281 tcatcgccct gcaaattgta cgcggcaatg aaagcatcta tctgctgatg cgttaatgtc
    56341 gtaaaccggg catcaggctt acgtgtgatg tccggttaac tcgtggtatg ctgctgccgt
    56401 tccctttttt aatgacgcct ccatcatgtt tgtgaagctc ttacgttccg ttgcgattgg
    56461 attaattgtc ggcgctattc tgctggttgc catgccttcg ctgcgcagcc ttaacccgct
    56521 ttccactccg caatttgaca gtaccgatga gacgcctgcc agctataatc tggcggttcg
    56581 ccgcgccgcg ccagcggtgg ttaacgttta caaccgtggt gtgaacacca actctcacaa
    56641 ccagcttgag atccgcaccc tgggatccgg tgtaatcatg gatcaacgcg gttatatcat
    56701 caccaataaa cacgtcatca acgacgccga tcagatcatc gtcgccttac aggatggacg
    56761 tgtatttgaa gcattgctgg tgggatctga ctctctaacc gatctggcgg tacttaaaat
    56821 taatgccact ggcggtttac ctaccattcc aattaatgca cgtcgcgtac cgcacattgg
    56881 cgacgtagta ctggcgatcg gtaacccgta caacctcggg cagaccatta cccaagggat
    56941 tattagtgcc acggggcgaa tcggtctgaa ccctaccggg cggcaaaact tcctacaaac
    57001 cgatgcttcc attaaccacg gtaactctgg cggcgcgctg gtgaactcgc tgggagaact
    57061 gatgggcatt aacacgctgt cgtttgataa gagtaacgat ggcgaaacgc cggaaggtat
    57121 cggctttgcg attcctttcc agttagcaac caaaattatg gataagctga tccgcgatgg
    57181 gcgcgtgatc cgcggctaca ttggcattgg tggacgtgag atcgcaccac tgcacgcgca
    57241 gagcggtggt atagatcaac tgcaagggat cgtggttaat gaagtgtcac ctgacggccc
    57301 ggcggcgaat gcgggtattc aggtcaacga tctgattatt tcggtggata acaaaccggc
    57361 catctctgct ctggagacga tggatcaggt ggcagaaatt cgccctggtt cggtgatccc
    57421 ggttgtagtg atgcgtgatg ataagcagtt aacgctgcag gtcaccattc aggaatatcc
    57481 ggcaaccaat taagtcgagt gctcaaaaca aaaaaccgga gtctgtgctc cggtttttta
    57541 ttattcgcta atcaattact tattaacgaa ctcttcgccc agggcgatat ctttcttgag
    57601 cgtatccagc ataccttcca gcgcgttctg ttcaaatgcg ctcagggtac cgatagattt
    57661 acgctcttcc acgccgtttt tacccagcag cagcggttga gagaagaaac gggcgtactg
    57721 accgtcgcct tcaacgtagg cacattcgac aacgccttgt tcgccctgca gtgcacgaac
    57781 cagagacaga ccaaaacgtg cagctgcctg gcccatagac agggttgcag acccgccacc
    57841 ggctttcgct tcaaccacct cagtacccgc gttctggata cgtttggtca gatcagccac
    57901 ttcctgctcg gtaaaactaa cgccaggaac ctgtgacagc agcggcagaa tggtaacacc
    57961 agagtgaccg ccaataaccg gcacttcaac ttcgcctggc tgtttgcctt tcagttccgc
    58021 aacaaaggtg ttggaacgaa tgatatccag cgtggtaacg ccgaacagtt tgtttttgtc
    58081 ataaacaccg gcttttttca gcacttcagc agcaattgca actgtggtgt taaccgggtt
    58141 agtgataata ccaatgcacg ctttcgggca ggttttcgca acttgctgta ccaggttttt
    58201 cacgatgccg gcgttaacgt taaacaggtc ggaacgatcc atacccggtt tacgcgctac
    58261 acctgcagag ataagaacga catctgcgcc ttccagcgcc ggagtcgcat cttcaccaga
    58321 aaaacctttg attttcacag cagtagggat atggctcaga tcgacagcca caccgggagt
    58381 cactggagcg atatcataca gagagagttc tgaacctgaa ggcagttggg tttttaacag
    58441 tagtgcaagc gcctggccaa taccgccagc agcgccgagg actgcgactt tcatcctaaa
    58501 ctccttatta tattgataaa ctaagatatg ttgctccgct gccgcgacct taatccacaa
    58561 aattgccgtt tacaatgacc acatatcaag aatgtgtagt cacgcaagtt tagcgtttat
    58621 gcatttaatt gccgtaatca ggaacctaac ttacgtaatt aacagtcgct tatgcattag
    58681 cgcaacattc caacaggtgg tgacaatata ccctaccgtt cagccaaaac aacatcaatt
    58741 tgataacaat taatttactt ttaagcagaa tttgcatgcc gtgacgcagg catgtttctc
    58801 aataacgaaa tttgataaaa tcccgctctt tcataacatt atttcagcct tcttcagggt
    58861 tgactgtttg cataaaaatt catctgtatg cacaataatg ttgtatcaac caccatatcg
    58921 ggtgacttat gcgaagctcg gctaagcaag aagaactagt taaagcattt aaagcattac
    58981 ttaaagaaga gaaatttagc tcccagggcg aaatcgtcgc cgcgttgcag gagcaaggct
    59041 ttgacaatat taatcagtct aaagtctcgc ggatgttgac caagtttggt gctgtacgta
    59101 cacgcaatgc caaaatggaa atggtttact gcctgccagc tgaactgggt gtaccaacca
    59161 cctccagtcc attgaagaat ctggtgctgg atatcgacta caacgatgca gttgtcgtga
    59221 ttcataccag ccctggcgcg gcgcagttaa ttgctcgcct gctggactca ctgggcaaag
    59281 cagaaggtat tctgggcacc atcgctggcg atgacaccat ctttaccacc cctgctaacg
    59341 gtttcaccgt caaagacctg tacgaagcga ttttagagct gttcgaccag gagctttaat
    59401 ctctgccccg tcgcttctgg cggcggggaa aatgttgctt atccctctca accccctgct
    59461 ttcccctgcg attaatttaa cgaatagtgc gttttactgc gacatgtcat tcacataatg
    59521 aatacatacg gtaaaaaaag cacattatgc aaaattcatt atctaattga aaatactaga
    59581 attaaaaata aatgaccgtg tttttaattc ttttttgtta ttaaaattca catttttaac
    59641 acttagtatc aactgaaaca gttagcgtgg tattaattag ttcaataatt agtgtatgct
    59701 tgattttgtg atatgggtca caaaacaaag gcccagctaa aagattatgt cgaggtaaaa
    59761 atcatgaaaa tcaaaaccac tgtagctgca ttaagcgtac tttctgttct ctctttcggt
    59821 gcattcgctg ccgactccat tgatgctgca caagcacaaa atcgtgaagc aatcgggacc
    59881 gtatccgtaa gtggtgtggc gtcttcgcca atggatatgc gtgaaatgct gaacaaaaaa
    59941 gcggaagaga aaggcgcaac ggcctaccag attactgaag ctcgtagcgg tgacacctgg
    60001 cacgctacgg ctgaactgta caaataaacc ctcatcgtct tgtccgacga tattgccccc
    60061 ggttcggggg ctttttttgc gctaatgacg aacattaaaa cgcaaatgcc cttccagctc
    60121 ttcctctgcc tcatcaaaca gcaatattaa cgcgccaaaa cggcgacgcg ttttctctcc
    60181 cagatgaaca aattcaatct caagtggtag cggcaggaca tcgttcatta acacatccca
    60241 tagtgagtcg agatcgcgta ccttatcttt cgccagacca aaggtttggc taaagtcacg
    60301 ataaaaatcc tcctgactct caatctcatc aaaatcaaag gtataaatat tcatctattg
    60361 ccaccgtcac gtttcgcggc gagttctgcc gtgcatcgct aagtatagcc atgaaaaaac
    60421 cgacactttt ggcgtcggtt ttgacctaac tatcggtcaa cgcatgttga tacttatgga
    60481 gcatacccgc cagccgatga accggttccg tcacctgcgg tggcgcttgc cagatgcgta
    60541 gcttttcctg gtagatttca agttcttcca gcaactggcc aaagtaccga cgacgtttat
    60601 catcgctacg ggcagatatc acatggtctg ctgtgcggcg catttgtcgg tgaaacgccg
    60661 ataaatcctc gttaaccggg atcggcgcat cacgcaggcg ctggtgcgcg ataatcatcg
    60721 tcagcgccag gcgaaatttc ggcaaatccc ctgggaactt attcatcagc aaaaacagct
    60781 gctgataaag tgccgggagg tggttctctt tacgacgtgc cacattggta gtcatcgcgg
    60841 aaacagcggc agaaacaaac tgattaagca gtacacgttc ggtcctgtcg cgcgatttat
    60901 cccgcacaag caaaataacg gtgaacgcga gcacacagcc gacgatttgc cctaatgcgc
    60961 tgtcgagaaa ctgactgaaa tggaaagtca tcgggttatc cagcacgata atatttatgg
    61021 tgctggccag cgcccccatc gagcccagtc gccgttgctg tacttctata ccgaggaaaa
    61081 atcccagcac tgccaggcta atacacagca gcaacatgct ctgttgggta ttagggataa
    61141 tcaccaaaaa gtagagcagc cctaacggca gcgcggccag cgtcccgtag ataaagtcga
    61201 tcgccaccat gcgtggattc ggcaaacgca ttgccagtga cgtcactacc gcaatcatca
    61261 ccattgcacc actgccggaa gtccagcccg tccacagcca gaaaagcgtg cccagaatgc
    61321 aggaaagtgt ggttcgccag aagttaacca tcgcatgatg acgttcggct gactctactt
    61381 tgacttccgg ttcgccttgc aggatctctt cttcggtggc gttgattttt gtgttactga
    61441 taacgccgcg cttgagaagc tgataacgcg ttgccgccgc gacccagcta taaatggtga
    61501 caggcgtttc ccgttccccg gtccaggcga taactctccg caggcgtttg agctgcttgt
    61561 ggacgtcctg cgcggtttct accggcgtgt caaaaaattc gcggaaagta tcagtgatca
    61621 attccgggcg cgtattctga ataagataag tttcgcagga ttgggtaatc agcgtcagcg
    61681 atagcgtatt gatcgctttt aaacgtcgat tggcccgcgc ccagcgggaa gattccatat
    61741 tcaggttgct gcgcatgcct tgtagcgccg tggtgcgtcg caccaggtcg ccccaggctt
    61801 tatcgacaac ttcaccatcg ccatgcttga tacagagttg cattaattga tattgcgcga
    61861 ccagcaaact ttccagctct cgatccactt cttgtttgat cgatcgcgga gaaaagagca
    61921 aatccgctat aatcgcacac acaataccga taacgatctc gctacaacgt tcgacggcaa
    61981 actgcggcgt aagcaatggt tccggctgaa tggtgatcac aatgatcagc gcggtataac
    62041 cggccagccc ccacgcgtac gagttttcta ttcgtaccag cgaggatatc caggtacaaa
    62101 aaccggccca gatacagcac accagaatca tcaataatgg tgcgcggatc atcgcaatga
    62161 tgatcaccag tccggcaata cagccaataa atgtgccgat gatgcgcaaa aagccacgat
    62221 aacgaatagc gccagaatac ggttcacctc ccgcagcaaa ggccggaccg gcggcaacaa
    62281 tcgccgctgt cagtaccgcc cagcgtggcg tttccagctg gaagtgaaag ccaacaaaca
    62341 gcgccagtac aatggcggtc gccagtttta ccgcaaagcg aatatgttgg ttagcaatgg
    62401 agaaaatacc catcgtgatt aaccaaactc acgcaggcga tgggccattt tacggaagaa
    62461 cgaatcctgg ctttcgtcgc gatcttgttt gccagtgacc accactgtag cagtggtgcc
    62521 cgcaggccag atgttctctt gctggttgtc gagacgaata cgaaccggaa cacgttgcgc
    62581 aagacgcacc cattcaaggt tagagtctat agtcgccatc cctttgtcgt cacgcgtgct
    62641 gctggcgttg gtgacccctg cggcaacact atcaacagtc cctttcagca ctttgttact
    62701 gccaagcggc gtgatctctg cacgataccc cggacgcacc ccttccagct tagtttcttc
    62761 catataggcc agtacataga aggagttctg tttcaccagc gcaaccgccg ttgatcctcg
    62821 agtaataaac tcaccggtat agacgttgag gttggtcacc cagccatctg ctggcgcgcg
    62881 gatcaccgtg cgttcaagat ccagttttgc cagatcgcgg gtcgcctgcg ctttcgctaa
    62941 ctgatgcaga accgtttgta gtacgttgtt agcctagtcg atctcttcgc gagacatcgc
    63001 ctgcacaccg agacggttac gacgtccggc ctcctggcgt ttctcctgtg ccagtacctg
    63061 ataataagca acatcggctt gcgcttcctc aagcgccttt tgatagcgcg gctggtcgat
    63121 ggtgaacagt atctgtcctt ttttcaccag ctggttatca tgaacattca cctgggtaat
    63181 gagtccagaa acgtccggcg cgatcgcaat gacgtcagcg ctaaagcgcg cgtcacgcgt
    63241 ccagggggat tcggtgtaat agacccaggc attaaaaatt gcgatgaagg ccagaatgac
    63301 taatacgacc gtgatggccg tacgggagaa ttttcttatt agtgttttca cttcaacctc
    63361 aaacgaacag tcgcgatatc aaataaaaca agcagcaata gagcgcggtg ttgaacaacg
    63421 ccggatgcca gacaaagtcg tagatacctg ttggcacaag tacccggcgc accagccaga
    63481 aaatcgccag tgataaaagc aattcaaaaa atatcggtgg gaaggacagc ccaaacacca
    63541 cgataacggg aaacagactc atgttgacct tggttgtata gagagagcag gcgttattat
    63601 tttcagcatc tgtcgccgca gagaagggca tggaaagccg ggcgagagca acattgctgt
    63661 agattgatat ttaatatatt agcgtaactg ttatgctgtt atcta
//
LOCUS       DADKRT010000004        58656 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.004, whole genome shotgun sequence.
ACCESSION   DADKRT010000004 DADKRT010000000
VERSION     DADKRT010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 58656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 58656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..58656
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.004"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            88..2610
                     /gene="mrcB"
                     /locus_tag="JQ356_000216"
     CDS             88..2610
                     /gene="mrcB"
                     /locus_tag="JQ356_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HAY4620416.1"
                     /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
                     PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL
                     PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
                     FPDSKEGQVRAHLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
                     SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
                     FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
                     FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
                     MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
                     EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
                     GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGLVWSPQNDDRRYSESGRVMLV
                     DALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
                     FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
                     GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWAGRDNNQPTKLYGASGAM
                     SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQSE
                     MQQQPSGNPFDQSSQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
     gene            2830..5019
                     /gene="fhuA"
                     /locus_tag="JQ356_000217"
     CDS             2830..5019
                     /gene="fhuA"
                     /locus_tag="JQ356_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
                     /protein_id="HAY4620417.1"
                     /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
                     TAAPAPQESAWGPAATIAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEA
                     LGYTPGVTVSSRGASNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE
                     RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALD
                     DNGEFSYRLTGLARSTNEQQKNSESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGY
                     YGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLR
                     FSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLT
                     GVDFMRMRNDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEW
                     NKWVFTLGGRYDWSKQATTVRENSYTPTEGYIERNDHQFTWRGGANYLFDNGISPYFS
                     YSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTKTNNLTA
                     DPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQV
                     PEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLA
                     RFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQVVATATFRF"
     gene            5070..5867
                     /gene="fhuC"
                     /locus_tag="JQ356_000218"
     CDS             5070..5867
                     /gene="fhuC"
                     /locus_tag="JQ356_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HAY4620418.1"
                     /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
                     HNGSSKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV
                     RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAEIMRGDTLEMIYGIPMGILPHPAGAAPVSFVY"
     gene            5867..6757
                     /gene="fhuD"
                     /locus_tag="JQ356_000219"
     CDS             5867..6757
                     /gene="fhuD"
                     /locus_tag="JQ356_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HAY4620419.1"
                     /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL
                     PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
                     SAGYGPSAEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED
                     FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
                     STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG
                     ATLSAMHFVRVLDNAIGGKA"
     gene            6754..8736
                     /gene="fhuB"
                     /locus_tag="JQ356_000220"
     CDS             6754..8736
                     /gene="fhuB"
                     /locus_tag="JQ356_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HAY4620420.1"
                     /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
                     DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
                     ITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI
                     NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
                     DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR
                     LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
                     KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWP
                     RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
                     LPAGSIGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
                     LTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGMALTPTR
                     IALLLLAACLTATSTMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
                     DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR"
     gene            complement(8771..10051)
                     /gene="hemL"
                     /locus_tag="JQ356_000221"
     CDS             complement(8771..10051)
                     /gene="hemL"
                     /locus_tag="JQ356_000221"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HAY4620421.1"
                     /translation="MSKSENLYSAARELLPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPQPE
                     FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF
                     GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG
                     LLEAAEEAGTPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
                     LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
     gene            10276..11697
                     /gene="clcA"
                     /locus_tag="JQ356_000222"
     CDS             10276..11697
                     /gene="clcA"
                     /locus_tag="JQ356_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HAY4620422.1"
                     /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
                     LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
                     EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
                     MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
                     FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM
                     QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
                     FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVVVELFPQYHLEAGTFAIA
                     GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSEILA
                     RTLAKQEAEQLARSKAASASENT"
     gene            11721..11786
                     /locus_tag="JQ356_000223"
     CDS             11721..11786
                     /locus_tag="JQ356_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620423.1"
                     /translation="MAIIIGLEFAQLPMSFGAKYE"
     gene            11779..12123
                     /gene="erpA"
                     /locus_tag="JQ356_000224"
     CDS             11779..12123
                     /gene="erpA"
                     /locus_tag="JQ356_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HAY4620424.1"
                     /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(12170..12793)
                     /locus_tag="JQ356_000225"
     CDS             complement(12170..12793)
                     /locus_tag="JQ356_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HAY4620425.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
     gene            complement(12836..13630)
                     /gene="btuF"
                     /locus_tag="JQ356_000226"
     CDS             complement(12836..13630)
                     /gene="btuF"
                     /locus_tag="JQ356_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005024031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
                     /protein_id="HAY4620426.1"
                     /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP
                     VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASPGI
                     KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL
                     QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP
                     DQIPKIKQYWGEQLKIPVIPLTSDWFDVQAHVLSSLHNSSVMRFHR"
     gene            complement(13623..14321)
                     /gene="mtnN"
                     /locus_tag="JQ356_000227"
     CDS             complement(13623..14321)
                     /gene="mtnN"
                     /locus_tag="JQ356_000227"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HAY4620427.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFEADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     SLMVESLVQKLAHG"
     gene            14405..15922
                     /gene="dgt"
                     /locus_tag="JQ356_000228"
     CDS             14405..15922
                     /gene="dgt"
                     /locus_tag="JQ356_000228"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HAY4620428.1"
                     /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRMKELKLLEAYGLDEL
                     TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL
                     RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS
                     HPDVEQLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR
                     HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            16052..17476
                     /gene="degP"
                     /locus_tag="JQ356_000229"
     CDS             16052..17476
                     /gene="degP"
                     /locus_tag="JQ356_000229"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HAY4620429.1"
                     /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
                     LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
                     GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
                     DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
                     ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
                     TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
                     VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
                     IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
                     LDSKPSVLALNIQRGDSTIYLLMQ"
     gene            17654..18784
                     /locus_tag="JQ356_000230"
     CDS             17654..18784
                     /locus_tag="JQ356_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdaR family transcriptional regulator"
                     /protein_id="HAY4620430.1"
                     /translation="MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALL
                     VLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMT
                     AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV
                     EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH
                     RKRVEQLITRMKEYGRLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF
                     YQDLMLPVLLDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKA
                     LFIYRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER"
     gene            complement(18873..19259)
                     /locus_tag="JQ356_000231"
     CDS             complement(18873..19259)
                     /locus_tag="JQ356_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HAY4620431.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
                     SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
                     DLRHLESVVTNKISEIEADLEKLTRK"
     gene            complement(19421..20233)
                     /gene="yaeI"
                     /locus_tag="JQ356_000232"
     CDS             complement(19421..20233)
                     /gene="yaeI"
                     /locus_tag="JQ356_000232"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414706.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase YaeI"
                     /protein_id="HAY4620432.1"
                     /translation="MISRRRLLQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKD
                     NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFS
                     DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFE
                     LVGTGDLWAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVP
                     LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV"
     gene            complement(20288..21112)
                     /gene="dapD"
                     /locus_tag="JQ356_000233"
     CDS             complement(20288..21112)
                     /gene="dapD"
                     /locus_tag="JQ356_000233"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HAY4620433.1"
                     /translation="MQQLQNIIETAFERRAEITPTNADTVTREAVNQVIALLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
                     TGEIHYGHVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
     gene            complement(21143..23815)
                     /gene="glnD"
                     /locus_tag="JQ356_000234"
     CDS             complement(21143..23815)
                     /gene="glnD"
                     /locus_tag="JQ356_000234"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HAY4620434.1"
                     /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ
                     RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
                     NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
                     YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
                     IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
                     HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
                     TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
     gene            complement(23877..24671)
                     /gene="map"
                     /locus_tag="JQ356_000235"
     CDS             complement(23877..24671)
                     /gene="map"
                     /locus_tag="JQ356_000235"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HAY4620435.1"
                     /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
                     CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
                     DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
     gene            25039..25764
                     /gene="rpsB"
                     /locus_tag="JQ356_000236"
     CDS             25039..25764
                     /gene="rpsB"
                     /locus_tag="JQ356_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HAY4620436.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            26022..26873
                     /gene="tsf"
                     /locus_tag="JQ356_000237"
     CDS             26022..26873
                     /gene="tsf"
                     /locus_tag="JQ356_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HAY4620437.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            27020..27745
                     /gene="pyrH"
                     /locus_tag="JQ356_000238"
     CDS             27020..27745
                     /gene="pyrH"
                     /locus_tag="JQ356_000238"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HAY4620438.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            28037..28594
                     /gene="frr"
                     /locus_tag="JQ356_000239"
     CDS             28037..28594
                     /gene="frr"
                     /locus_tag="JQ356_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HAY4620439.1"
                     /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
                     QKLTDAAIKKIEAALADKEAELMQF"
     gene            28686..29882
                     /gene="ispC"
                     /locus_tag="JQ356_000240"
     CDS             28686..29882
                     /gene="ispC"
                     /locus_tag="JQ356_000240"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HAY4620440.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
                     QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
                     PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE
                     VMRLAS"
     gene            30070..30828
                     /gene="ispU"
                     /locus_tag="JQ356_000241"
                     /gene_synonym="uppS"
     CDS             30070..30828
                     /gene="ispU"
                     /locus_tag="JQ356_000241"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HAY4620441.1"
                     /translation="MLSATQLLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK
                     VQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFIDV
                     LWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
     gene            30841..31698
                     /gene="cdsA"
                     /locus_tag="JQ356_000242"
     CDS             30841..31698
                     /gene="cdsA"
                     /locus_tag="JQ356_000242"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414717.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HAY4620442.1"
                     /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG
                     QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVSLLL
                     VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV
                     TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            31710..33062
                     /gene="rseP"
                     /locus_tag="JQ356_000243"
     CDS             31710..33062
                     /gene="rseP"
                     /locus_tag="JQ356_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HAY4620443.1"
                     /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA
                     AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP
                     DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR
                     GLQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
                     ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
                     WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
                     INLFPLPVLDGAHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            33092..35524
                     /gene="bamA"
                     /locus_tag="JQ356_000244"
     CDS             33092..35524
                     /gene="bamA"
                     /locus_tag="JQ356_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HAY4620444.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
                     KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
                     LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
                     YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
                     TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
                     HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
                     DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
                     MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
                     AEQFQFNIGKTW"
     gene            35646..36131
                     /gene="skp"
                     /locus_tag="JQ356_000245"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             35646..36131
                     /gene="skp"
                     /locus_tag="JQ356_000245"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HAY4620445.1"
                     /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
                     TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
                     QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
                     K"
     gene            36135..37160
                     /gene="lpxD"
                     /locus_tag="JQ356_000246"
     CDS             36135..37160
                     /gene="lpxD"
                     /locus_tag="JQ356_000246"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HAY4620446.1"
                     /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
                     SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
                     YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
                     ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
                     RKVNQQD"
     gene            37265..37720
                     /gene="fabZ"
                     /locus_tag="JQ356_000247"
     CDS             37265..37720
                     /gene="fabZ"
                     /locus_tag="JQ356_000247"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HAY4620447.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            37724..38512
                     /gene="lpxA"
                     /locus_tag="JQ356_000248"
     CDS             37724..38512
                     /gene="lpxA"
                     /locus_tag="JQ356_000248"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HAY4620448.1"
                     /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVGIGEGTVL
                     KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
                     YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFSRSTRGLIR"
     gene            38512..39660
                     /gene="lpxB"
                     /locus_tag="JQ356_000249"
     CDS             38512..39660
                     /gene="lpxB"
                     /locus_tag="JQ356_000249"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HAY4620449.1"
                     /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
                     CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQTYPDLEIVVPLVNAKRREQFERIKAEVARDFSVHLLDGMGREAMVASDAALLASG
                     TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
                     QKLAAALLPLLANGKISHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
     gene            39657..40253
                     /gene="rnhB"
                     /locus_tag="JQ356_000250"
     CDS             39657..40253
                     /gene="rnhB"
                     /locus_tag="JQ356_000250"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HAY4620450.1"
                     /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
                     DSKKLSEKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS"
     gene            40290..43772
                     /gene="dnaE"
                     /locus_tag="JQ356_000251"
     CDS             40290..43772
                     /gene="dnaE"
                     /locus_tag="JQ356_000251"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HAY4620451.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS
                     KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
                     HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERVKRRPEYDERLETELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGVNAEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK
                     AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
                     IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
                     FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYASGLAISL
                     TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
                     RGLIGSEQVELEFD"
     gene            43785..44744
                     /gene="accA"
                     /locus_tag="JQ356_000252"
     CDS             43785..44744
                     /gene="accA"
                     /locus_tag="JQ356_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HAY4620452.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
                     MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
                     RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
     gene            44843..46952
                     /gene="ldcC"
                     /locus_tag="JQ356_000253"
                     /pseudo
     CDS             44843..46952
                     /gene="ldcC"
                     /locus_tag="JQ356_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414728.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
     gene            47009..47398
                     /locus_tag="JQ356_000254"
     CDS             47009..47398
                     /locus_tag="JQ356_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY4620453.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW
                     KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEA
                     IRVDPYTQKSFTFFNDPDGLPLELYEQ"
     gene            47463..48761
                     /gene="tilS"
                     /locus_tag="JQ356_000255"
     CDS             47463..48761
                     /gene="tilS"
                     /locus_tag="JQ356_000255"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HAY4620454.1"
                     /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
                     RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
                     RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR
                     GELAQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE
                     QESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV
                     RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSETIVPWQTWLQPLELPA
                     GLGSVQLTAGGDIRPPRADEAVSVRFKSAGLLHIVGRNGGRKLKKIWQELGVPPWLRD
                     TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
     gene            complement(48810..49070)
                     /gene="rof"
                     /locus_tag="JQ356_000256"
     CDS             complement(48810..49070)
                     /gene="rof"
                     /locus_tag="JQ356_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HAY4620455.1"
                     /translation="MLMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
                     LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES"
     gene            complement(49057..49257)
                     /locus_tag="JQ356_000257"
     CDS             complement(49057..49257)
                     /locus_tag="JQ356_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HAY4620456.1"
                     /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS
                     EAVREKAAYAAANLLVSDYVNE"
     gene            49423..49968
                     /locus_tag="JQ356_000258"
     CDS             49423..49968
                     /locus_tag="JQ356_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HAY4620457.1"
                     /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL
                     LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV
                     ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV
                     IWLSDDKNNLEVNLTAWQQPL"
     gene            49965..50387
                     /gene="arfB"
                     /locus_tag="JQ356_000259"
     CDS             49965..50387
                     /gene="arfB"
                     /locus_tag="JQ356_000259"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY4620458.1"
                     /translation="MIVISRHVAIPDGELEITVIRAQGAGGQHVNKTSTAIHLRFDIR
                     ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQ
                     KARRPTRPTRASKERRLASKAQKSSAKAMRGKVRSGRE"
     gene            50401..51111
                     /gene="nlpE"
                     /locus_tag="JQ356_000260"
                     /gene_synonym="cutF"
     CDS             50401..51111
                     /gene="nlpE"
                     /locus_tag="JQ356_000260"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308221.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HAY4620459.1"
                     /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
                     SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
                     TFTDCATGKRFMVANNAELERGYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
                     PDTAGKFYPNKDCSSLGQ"
     gene            complement(51311..52131)
                     /locus_tag="JQ356_000261"
                     /pseudo
     CDS             complement(51311..52131)
                     /locus_tag="JQ356_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414735.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YaeF family permuted papain-like enzyme"
     gene            complement(52184..53902)
                     /gene="proS"
                     /locus_tag="JQ356_000262"
     CDS             complement(52184..53902)
                     /gene="proS"
                     /locus_tag="JQ356_000262"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HAY4620460.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
                     DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
                     PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
                     VKQIKG"
     gene            complement(54013..54720)
                     /gene="tsaA"
                     /locus_tag="JQ356_000263"
     CDS             complement(54013..54720)
                     /gene="tsaA"
                     /locus_tag="JQ356_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HAY4620461.1"
                     /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ
                     ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
                     MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNV
                     RWRVTDAGFEVFALEPR"
     gene            complement(54717..55121)
                     /gene="rcsF"
                     /locus_tag="JQ356_000264"
     CDS             complement(54717..55121)
                     /gene="rcsF"
                     /locus_tag="JQ356_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HAY4620462.1"
                     /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
                     RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN
                     AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
     gene            complement(55239..56054)
                     /gene="metQ"
                     /locus_tag="JQ356_000265"
     CDS             complement(55239..56054)
                     /gene="metQ"
                     /locus_tag="JQ356_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HAY4620463.1"
                     /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
                     LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(56094..56747)
                     /gene="metI"
                     /locus_tag="JQ356_000266"
     CDS             complement(56094..56747)
                     /gene="metI"
                     /locus_tag="JQ356_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HAY4620464.1"
                     /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
                     FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK"
     gene            complement(56740..57771)
                     /gene="metN"
                     /locus_tag="JQ356_000267"
     CDS             complement(56740..57771)
                     /gene="metN"
                     /locus_tag="JQ356_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HAY4620465.1"
                     /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
                     VKVEVLGYV"
     gene            57959..58531
                     /gene="gmhB"
                     /locus_tag="JQ356_000268"
     CDS             57959..58531
                     /gene="gmhB"
                     /locus_tag="JQ356_000268"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HAY4620466.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
                     MGFVLVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
                     FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKP
                     ITPEAENAADWVLNSLADLPQAIKKQQKPA"
BASE COUNT        13984 a        14455 c        16069 g        14148 t
ORIGIN      
        1 cacaaatttt gagagatatc ttcttctgtc ttgtaacaga agaacagaaa atcgggcttt
       61 tgcgcctgaa tattgcggag aaaaagcatg gccgggaatg accgcgagcc aattggacgc
      121 aaagggaaac cgacgcgtcc ggtcaaacaa aaggtaagcc gtcgtcgtta cgaagatgac
      181 gatgattacg acgattatga tgactatgag gatgaagaac cgatgccgcg caaaggtaag
      241 ggcaaaggca aagggcgtaa gcctcgtggc aaacgcggct ggctatggct actgctaaaa
      301 ctggctatcg tttttgccgt gctgatcgcc atttacggcg tttatctcga tcaaaaaatt
      361 cgtagccgta ttgatggcaa ggtctggcaa ctgcctgcgg cagtttatgg ccgaatggtc
      421 aatcttgagc cagatatgac catcagcaag aacgagatgg tgaagctgct ggaggcgact
      481 cagtatcgtc aggtgtcgaa aatgacccgt cctggcgaat ttaccgtgca ggccaacagc
      541 attgagatga tccgccgtcc gtttgatttc ccggacagta aagaagggca ggtgcgtgcg
      601 catctgacct ttgatggtga tcatctggcg accatcgtca atatggagaa caaccgtcag
      661 ttcggctttt tccgtcttga tccgcgtctg atcaccatga tctcctcgcc aaacggtgag
      721 caacgtctgt ttgtgccgcg cagtggtttc cctgatttgc tggtggatac tttgctggcg
      781 acagaagacc gccatttcta cgagcatgat gggatcagcc tctactcaat tgggcgtgcg
      841 gtgctggcaa acctgaccgc aggtcgcacg gtgcagggtg cgagtacgct gacgcaacag
      901 ctggtgaaaa acctgttcct ctccagcgag cgctcttact ggcgtaaagc gaacgaagcc
      961 tacatggcgc tgatcatgga cgcgcgttac agcaaagacc gtattcttga gctgtatatg
     1021 aacgaggtgt atctcggtca gagcggcgac aacgaaatcc gcggcttccc gctggcaagc
     1081 ttgtattact ttggtcgccc ggtagaagag ctaagcctcg accagcaggc gctgttagtc
     1141 ggtatggtga aaggggcgtc catctacaac ccgtggcgta acccgaaact ggcgctggag
     1201 cgacgtaatc tggtgctgcg tctgctgcaa cagcaacaga ttattgatca agaactctat
     1261 gacatgttga gtgcccgtcc gctgggggtt cagccgcgcg gtggggtgat ctctcctcag
     1321 ccagccttta tgcaactggt gcgtcaggag ctgcaggcaa aactgggcga taaggtaaaa
     1381 gatctctccg gcgtgaagat cttcactacc tttgactcgg tggcccagga cgcggcagaa
     1441 aaagccgccg tggaaggcat tccggcactg aagaaacagc gtaagttgag cgatcttgaa
     1501 actgcgattg tggtcgtcga ccgctttagt ggtgaagttc gtgcgatggt gggaggttct
     1561 gagccgcagt ttgcgggcta caaccgtgcg atgcaggcgc gtcgttcgat tggttccctt
     1621 gcaaaaccag cgacttatct gacggcttta agccagccga aaatctatcg cctgaacacg
     1681 tggattgccg atgcgccaat cgcgctgcgt cagccgaatg gcctggtctg gtcaccgcag
     1741 aacgatgacc gtcgttatag cgaaagcggc agagtgatgc tggtggatgc gttgacccgt
     1801 tcgatgaacg tgccgacggt aaatctgggg atggcgctgg ggctgcctgc agttacggat
     1861 acctggatca aactgggcgt accgaaagat cagctgcatc cggttccggc gatgctgctg
     1921 ggggcgttga acttaacgcc aatcgaagtg gcgcaggcgt tccagaccat cgccagcggt
     1981 ggtaaccgtg caccgctttc tgcactgcgt tcggtaatcg cggaagatgg caaggtgctg
     2041 tatcagagct tcccgcaggc agaacgcgct gttccggcgc aggcggcgta tctgacacta
     2101 tggaccatgc agcaggtggt acaacgtggt acgggtcgtc agcttggggc gaaatacccg
     2161 aacctgcatc tggcagggaa aacagggact accaacaata acgtagatac ttggtttgca
     2221 ggcattgacg gcagcacggt gaccatcacc tgggcaggcc gtgataacaa ccagccgacc
     2281 aaactgtatg gagccagcgg ggcaatgtcg atttatcagc gttatctggc taaccagacg
     2341 ccaacgccgc tgaatcttgt tccgccagaa gatattgcag atatgggcgt ggactacgac
     2401 ggcaactttg tttgcagcgg tggcatgcgt gtcttgccgg tctggaccag cgatccgcaa
     2461 tcgctgtgcc agcagagcga gatgcagcag cagccgtcag gcaatccgtt tgatcagtct
     2521 tctcagccgc aacagcaacc tgctcagcaa gagcagaaag acagcgacgg tgtagccggt
     2581 tggatcaagg atatgtttgg tagtaattaa catctaagcg tgaaataccg gatggcgagt
     2641 tgccatccgg taaaataaca tcccatctaa gatattaacc ctttcttttc atctggttgt
     2701 ttattaaccc ttcaggaacg ctcagattgc gtaccgcttg cgaacccgcc agcgtttcga
     2761 atattatctt atctttataa taatcattct cgtttacgtt atcattcact ttacatcaga
     2821 gatataccaa tggcgcgttc caaaactgct cagccaaaac actcactgcg taaaatcgca
     2881 gttgtagtag ccacagcggt tagcggcatg tctgtttatg cacaggcagc ggttgaaccg
     2941 aaagaagaca ctatcaccgt taccgctgca cctgcgccgc aagaaagcgc atgggggcct
     3001 gctgcaacta ttgcggcgaa gcactctgct actgcgacta aaacggatac accaattgaa
     3061 aaaacgccgc agtctatttc ggttgtgaca aatgaagaga tgcagatgca tcaatttcag
     3121 tctgtaaaag aagcattagg ttatacacct ggcgttacgg ttagcagtcg tggtgcttct
     3181 aatacatatg attttgttat cattcgtggt ttctcatctg ttggtctgaa tcaaaataat
     3241 taccttgatg gactaaaact tcagggcaac ttttataacg atgctgtgat tgatccttac
     3301 atgctcgaga gggttgaact gatgcgtggg ccgacgtctg ttctctatgg aaaaagtaat
     3361 cctggtggga ttatttctat ggtgagtaag cgtccgacca ctgaacccct gaaagaaatt
     3421 cagtttaaaa tggggacgga taatctgttt cagaccggat tcgatttcag tgatgcactg
     3481 gatgataacg gtgagttctc ttaccgtttg acgggcctcg ctcgctcaac aaacgaacag
     3541 cagaaaaact ctgaatctca gcgttatacc attgctccat cattctcatg gcgtccagac
     3601 gacaaaacca attttacttt cctgtcctat ttccagaatg aaccagaaac gggttattac
     3661 ggttggttgc cgaaagaggg gaccgttgag ccattgccta atggtaagcg tctaccgact
     3721 gacttcaatg aaggtgcatc gaataataca tactcccgta accagaaaat ggtgggatat
     3781 agttttgaac atggttttaa tgacaccttc accgtgcgtc agaatctgcg tttcagtgaa
     3841 atgaaaacct cacagaaaag tgtttatggc acagggattg ctggtgatgg tcatacccta
     3901 aaccgcggga cagtggtgga taatgagcgt ctacaaaact ttagcgttga tacccaactt
     3961 gaaagtaagt ttgctacagg tgacgtcgag catactttgc tgacaggggt agacttcatg
     4021 cggatgcgta atgatatcaa tgccagcttt ggatccgcac catccatcga tctttataac
     4081 aaatatcacc ctgaatactt tgcatttggt agcgcagagc cataccagat gaatgaaagc
     4141 aaacaaacag gtatttatgt tcaggatcag gcggaatgga ataaatgggt attcactctg
     4201 gggggacgct acgattggtc taagcaagcg accactgttc gtgaaaactc ttatacgccg
     4261 actgaaggtt atattgagcg caatgatcat cagttcacct ggcgcggtgg tgcaaattac
     4321 ttattcgata atggtatttc accttacttt agctatagcc agtcctttga accgagtgct
     4381 ttcgatctgt ggagcaaccc acgcatttcc tataagccat cgaaaggtga acagtatgaa
     4441 gctggcgtaa aatatgttcc gaatgatatg ccggtcgttg ttacgggcgc agtctatcaa
     4501 ttgacgaaaa caaataacct gacagcagac ccaacaaacc cattagcgca agtcccagca
     4561 ggtgagattc gcgctcgtgg tgtggaactt gaagcaaaag cggcgttaaa tgccaatatt
     4621 aacttgacgg cttcttatac ctacaccgat gcggaataca ccaaagacac caatctcaaa
     4681 ggtaaaactc cagaacaagt accggagcat atggcatctc tctgggggga ttataccttc
     4741 aatgaagggc cgctttctgg tttaacattg ggaacaggtg gtcgttttat tggttccagc
     4801 tatggtgatc cggcaaacac ttttaaagtg ggtagcgcag ctgtaatgga tgctgttgta
     4861 aaatatgatc tggcacgctt tggtatggcg ggatccagcc ttgctgtgaa cgtcaacaat
     4921 ttgctcgatc gtgagtatgt tgccagttgc ttccagactt atggctgctt ctggggcgca
     4981 gaacgtcagg tcgttgcaac cgcaaccttc cgtttctaat ttctcttttg gggcacggat
     5041 ttccgtgccc atttcacaag ttggctgtta tgcaggaata cacgaatcat tccgatacca
     5101 cttttgcact gcgtaatatc tcctttcgtg tgcccgggcg cacgcttttg catccgctgt
     5161 cgttaacctt tcctgccggg aaagtgaccg gtctgattgg tcacaacggt tctagtaaat
     5221 ccactctgct caaaatgctt ggccgtcatc agcctccgtc agaaggggag attcttcttg
     5281 atgcccagcc gctggaaagc tggagcagca aagcgtttgc ccgcaaagtg gcttatttgc
     5341 cgcagcagct tcctccggca gaagggatga ccgtgcgtga actggtggcg attggtcgtt
     5401 acccgtggca tggcgcgctg gggcgctttg gggcggcaga tcgcgaaaaa gtcgaggaag
     5461 ctatctcgct ggttggctta aaaccgctgg cgcatcggct ggttgatagt ctctctggcg
     5521 gcgaacgtca gcgggcgtgg atcgccatgc tggtggcgca ggatagccgt tgtctgttgc
     5581 tcgacgaacc gacctcggcg ctggatatcg cccaccaggt tgatgtgctg gcgctggtgc
     5641 accgtttaag tcaggagcgt ggcctgacgg tcattgccgt gttgcacgat atcaatatgg
     5701 cggcacgcta ctgtgattat ctggtcgccc tgcgcggtgg tgaaatgatt gctcagggaa
     5761 cgcctgcgga aattatgcgc ggcgataccc tcgaaatgat ttatggcatc ccgatgggta
     5821 ttttgccgca tccggcgggt gctgcacctg tgagttttgt ttattgatga gcggcttacc
     5881 tcttatttcg cgccgtcgac tgttaacggc gatggcgctt tctccgttgt tatggcagat
     5941 gaataccgcc cacgcggcgg ctattgatcc caatcgtatt gtggcgctgg agtggttgcc
     6001 ggtggaatta ctgctggcgc tcggcatcgt gccttacggc gtagcggata ccatcaacta
     6061 tcgcctgtgg gtcagcgaac caccattgcc ggactcagtg atcgacgtcg gtttgcgcac
     6121 agaacctaac cttgaactgc tgaccgaaat gaaaccgtcg tttatggtct ggtcggcagg
     6181 atatggccct tcagcagaaa tgctggcacg tattgcgccg gggcgtggat ttaacttcag
     6241 cgacggcaaa cagccgctgg cgatggcgcg taaatcactg acggaaatgg cagatttact
     6301 taacctgcaa agcgcagcag aaacgcattt agcgcaatat gaagacttta tccgcagcat
     6361 gaaaccccgc tttgtgaagc gtggtgcacg cccgttattg ctgacgacgc ttatcgatcc
     6421 gcgccatatg ttggtcttcg gtccaaacag cttgttccag gaaattcttg atgagtacgg
     6481 catcccaaat gcctggcaag gggaaaccaa cttctggggc agtaccgccg tcagtatcga
     6541 tcgtctggca gcgtataaag acgttgatgt gctctgtttt gatcacgaca acagcaaaga
     6601 catggatgcg ctaatggcaa ccccgctgtg gcaggccatg ccgtttgtcc gcgccggacg
     6661 ctttcagcgc gtacccgcag tctggtttta tggtgcgacg ctctcggcaa tgcactttgt
     6721 gcgcgttctg gataacgcca tcggaggtaa agcgtgagta aacgaattgc gcttttcccg
     6781 gcgttattgc tggcgctgct ggtgattgtc gctacggcgc tgacctggat gaacttttcg
     6841 caggcgctgc cgcgtagcca gtgggcgcag gccgcctggt cgccggatat tgacgtcatc
     6901 gagcagatga tttttcacta cagcttgctg ccgcgtctgg cgatttcgct gctggtgggc
     6961 gcaggcctgg ggctggtggg cgtgctgttt cagcaagtgc tgcgtaatcc gctggcggaa
     7021 ccgacgacac ttggcgttgc tacaggcgcg caactgggga ttaccgtcac tacgctctgg
     7081 gcgatcccag gggcgatggc gagtcagttt gctgcgctgg cgggcgcttg cgttgttggc
     7141 ttaatcgtct ttggcgtcgc gtgggggaaa cggctttcgc cggtaacgct gatcctcgcg
     7201 gggctggtag tgagccttta ttgtggggca atcaatcagt tactggttat cttccaccat
     7261 gaccaactgc aaagcatgtt cctgtggagc accggaacgc tgacgcaaac cgactggggc
     7321 ggtgttgagc gtttatggcc gcagttgctg ggcggtgtga tgctgacgtt gctgctactt
     7381 cgcccgttaa ccctgatggg gcttgatgat ggcgtggcgc gcaatctcgg gctggccttg
     7441 tcgctcgcgc gtctggcggc gctgtcgctg gcgattgtca tcagtgcgct gctggtgaac
     7501 gcggtgggga ttatcggctt tatcgggttg tttgcgccgt tgctggcaaa aatgctgggg
     7561 gcgcggcgtc tgctgccgcg actgatgctg gcgtcgttga ttggtgcgct gatcctctgg
     7621 ctttccgatc aaatcatcct ctggctgact cgcgtgtgga tggaagtgtc caccggttcg
     7681 gtcactgcgt tgatcggtgc gccgctgcta ctgtggctgt tgccgcgttt acgcagcatt
     7741 agcgcgccgg atatgaaggt caacgatcgt gtcgcggctg aacgccaaca tgtgctggcg
     7801 tttgccctcg cgggcggcgt gctgctgttg atggctgtgg tggtggcgct gtcgtttggt
     7861 cgtgatgcgc acggctggat gtgggcgagc ggggcgttgc tcgatgattt aatgccctgg
     7921 cgctggccgc gaattatggc ggcgctattt gcgggcgtca tgctggcggt ggcgggctgt
     7981 attattcagc gactgaccgg caacccgatg gcaagcccgg aagtgctggg gattagctcc
     8041 ggcgcagcgt ttggcgtggt actgatgctg tttctggtac cgggtaatgc ttttggctgg
     8101 ctgttacccg cgggaagtat cggtgccgcg gtgacgctgt tgattattat gatcgccgcc
     8161 gggcgcggtg gattttcccc acaccgcatg ttactggcgg ggatggcgtt aagtaccgca
     8221 ttcaccatgc ttttaatgat gttgcaggcg agtggtgacc cgcgaatggc gcaagtgctc
     8281 acctggatct ctggttcgac ctacaacgcc accgatgcgc aggtctggcg taccggaatt
     8341 gtgatggtga ttttgctggc gattaccccg ctgtaccgcc gctggctgac cattttacct
     8401 ctgggcggtg ataccgcacg agctgtggga atggcgctga cgccgacgcg aattgcgctg
     8461 ctgctgttag cggcttgcct gacggcgacc tcgacgatga ctattggacc gttgagtttt
     8521 gttggtttaa tggcaccgca tattgcgcgg atgatgggtt ttcgacggac gatgccacac
     8581 atcgtaattt cggcgctggt gggtggttta ctgctggtat tcgctgactg gtgtgggcgg
     8641 atggtgctgt ttccattcca gatcccggcg gggctgctgt cgacctttat cggcgcgcca
     8701 tattttatct atttgttgag aaagcagagc cgttaattga gtgcctcgcc cggtgggcga
     8761 ggcaaaatta tcacaacttc gcaaataccc gacgtgcagc atcgatggtg ttattgatat
     8821 cttccatgct gtgcgccaca gacataaagc ccgcttcaaa cgctgacggt gccaggtaaa
     8881 caccttcgtc cagcatcata tggaagaaac gcttaaagcg ttccacgtca caggccatca
     8941 catcctgata gcacgtcacg gactcggcgt cggtaaagaa aataccgaac atgccgccaa
     9001 cgtggttaac gaccagcgga gttccggctt cttctgccgc ttccagcaga ccttctgcca
     9061 gacgtgttgt cagctcatcc agcgtttcgt gaacgcccgg ctgcgcgact tcattcagac
     9121 aggcgaaacc cgctgccatc gcaatcgggt taccggaaag cgtacccgcc tgatagaccg
     9181 gacccgtcgg ggccagcgca tccattacat cacgacgacc accgaatgcg cctaccggca
     9241 ttccaccgcc gatgattttg ccgaggcagg ttaaatctgg cactacgccg taataatcct
     9301 gtgcgccagc cagtgccacg cggaagccgg tcatcacttc atcgatgatc agcaacgcgc
     9361 caaattcgtc gcacagcgca cgcagacctg gcaggaactc tggctgcggc ggaacacagt
     9421 tcatattgcc tgccaccggc tcgacgataa tacaggcaat ctcttgcggg tattgctcaa
     9481 acgcggcgcg tacagaagcc agatcgttat aagtacaggt taaggtatgt ttggcgaaat
     9541 ctgccggaac acccggcgag tttggctggc ctaacgtgag tgcgccagaa ccggctttca
     9601 ccagcaggca gtcagcgtga ccgtggtaac aaccttcaaa tttaatgatt ttgtcgcgac
     9661 cggtaaaacc acgggccagg cggatggcgc tcatggtcgc ttcagtgccg gagttcacca
     9721 tgcgcaccat atccatggtc gggaccagtt cggtcaccag ttgcgccatt ttcacttcca
     9781 tttcggtcgg tgcaccaaag cttaaaccac gctcggcggc ttcaatcacg gcattgcgga
     9841 tagccggatg gttatggccc agcaccatcg gcccccagga accgacataa tcgatatagg
     9901 ctttgccatc aacatcgtac agataagcgc cgtccgcttt ttcgataaac agtggagtgc
     9961 cgcccacgcc agtaaaggcg cgaacagggg agttcacacc gccagggagc agctcgcgcg
    10021 ctgcgctgta aagattttca gacttactca tggagggttc ctgattcgta gaaaaagtga
    10081 atggctgcta ttctatgtta ttcataacaa gttaaatact cgtcaaacat caggctgctt
    10141 gtactggtgc aatcctgatt tcttagagta taaaagtttt gtgcatttga aacattacgc
    10201 tttgcaaagg attttcatgg aacgtgcgag taaaatgccg tcatcttatt tgtatgacca
    10261 ataagtgatc attggatgaa aactgatact ccctctttag aaacaccgca ggccgcgcgc
    10321 ctgcgacgca gacaactgat tcgccaactt cttgagcgcg ataaaacccc gttagccatt
    10381 ttgtttatgg cggcagtcgt cggcacgctt gtcgggctgg cagcggttgc ttttgacaaa
    10441 ggtgtcgcct ggttgcagaa ccaacgtatg ggggcgctgg tacatactgc tgataattat
    10501 ccgcttctgt taaccgtcgc ttttctctgt tcggcggtgc tggcgatgtt cggctacttt
    10561 ttggtgcgca aatacgcgcc ggaagcaggt ggttcgggga tcccggaaat tgaaggggcg
    10621 ctggaagatc aacgtcccgt tcgctggtgg cgtgtgttgc cggtgaaatt ctttggcggg
    10681 ctggggacac tcggcggagg catggtgctg gggcgcgaag ggccaaccgt gcagatcggc
    10741 ggcaatatcg gtcgcatggt actcgatatt ttccgcctga aaggtgatga agctcgccat
    10801 acgctgctgg caaccggtgc tgctgcgggg ctggctgcgg cctttaacgc gccgctggcg
    10861 ggtattttgt ttattatcga agagatgcgt ccgcagtttc gctatacgtt aatttcgatt
    10921 aaagcggtat ttattggcgt cattatgtcg accattatgt accggatttt taatcatgaa
    10981 gttgcgttga ttgacgtcgg taaactttct gatgcgccgc ttaatacgct gtggctttat
    11041 ctgatcctcg gtattatttt tggcattttc ggccctattt ttaataaatg ggtgctgggg
    11101 atgcaggatt tgctgcaccg tgtgcacggc ggcaatatta ccaaatgggt gctaatgggc
    11161 ggtgcgattg gcggtctgtg tggattgctg gggtttgtgg caccagcaac gtcgggcggc
    11221 ggttttaacc tgattcctat cgctaccgca gggaatttca gcatgggaat gctggtgttt
    11281 atcttcgtcg cgcgggtcat taccacctta ctgtgcttct cttccggcgc gccgggcggt
    11341 atttttgccc cgatgctggc gctgggtact gtgctgggaa ccgctttcgg aatggttgtc
    11401 gttgagctgt ttccgcaata tcaccttgag gcggggactt ttgctattgc cggaatgggg
    11461 gcgttactgg cggcatctat tcgcgcgccg ttaacgggga tcattttggt tctggagatg
    11521 accgataact accagctcat tttgccaatg attattaccg gtcttggcgc aacactatta
    11581 gcgcaattta ccggcgggaa accgctatat tcggagattc ttgcgcgcac gctggcaaaa
    11641 caggaagctg agcaactggc gcgaagcaag gccgcatcag ccagcgagaa tacttgaacg
    11701 aaataccagg gtattagata atggcgatta ttattgggtt agaatttgcc caattgccga
    11761 tgtcgtttgg agcaaaatat gagtgatgac gtagcactgc cgctggagtt taccgacgca
    11821 gcagccaaca aagttaaaag cctgatcgct gacgaagata acccgaatct gaaattacgc
    11881 gtgtatatca ccggtggcgg ttgcagcggc ttccagtatg gtttcacctt tgatgatcag
    11941 gtgaacgaag gcgatatgac catcgaaaaa cagggcgttg gcctggtggt tgatccgatg
    12001 agcctgcaat atctggtcgg tggttccgtt gactataccg aaggactgga aggttctcgt
    12061 ttcatcgtga ccaacccgaa cgcgaaaagc acctgcggtt gcggttcttc ctttagcatc
    12121 taatctgttg ttcatgtgcc ggataaacta tccggcacat cttctctctt caacgcccat
    12181 tctcatccag cgcaaacgtc ggtagcttaa gatgccaacg aatagccgcc agccgaatca
    12241 atagcgtcac gaccatgccc atcatactgg ctgtttccag tggtacggaa aatgtgtaat
    12301 aagccgtagc gtggacaata ccgccgataa tacaggcagt tgcgtagatt tctgtacgta
    12361 aaatcatggg gatttcgcgg gccagtacat cacgaatgat cccgccgcca acgccagtaa
    12421 tgacgcccat acaaaccgcg attaacggac cggcttccgc attaaaggct ttattcacgc
    12481 caatgccgac aaacaccgcc agaccaacgg cgtccagcac cggcaacatc cattttggta
    12541 agcgtcttgg ctggcgcacc agcacgatgg tcagcatgct ggttaccatt gcaacgacca
    12601 gatcggtggg atctttcacc caaaataccg ggccgtgatc cagcgccatg tcgcgaattg
    12661 tcccgccgcc tacagcggta accacgccca gtaccagaac accaaaaggg tccatacgca
    12721 attttccggc taacaaaacg ccggagatgg caaataccgc tgtgccgact atatccagcc
    12781 aatagacgag cattgttcaa tccccactga gcacctaaaa aggtcaggcg ctaatctacc
    12841 tgtgaaagcg cattacagag ctgttgtgca gcgaggataa tacgtgggct tgcacgtcaa
    12901 accagtcact cgtgagagga ataacgggaa ttttgagctg ttcaccccag tattgtttga
    12961 ttttaggaat ttggtccggt ccgcctgtaa tgacaatcgc ctgtggcgag cgtgctaaca
    13021 cctgttcgcg gctaacttgc ggccaaggaa cccggctgtc tttaaagatg ttttctccgc
    13081 cacaaacttc gagtacctgg ttttgaatcg actcttttcc actggtaaat ggcggattaa
    13141 tgccgaattg cagaaaaaca cgttttttag gtttatcagc atattgcgct ttcaattgcg
    13201 cgtactgatc cagcagggat tgcgcggctt gttcggcctt atccggttgc ggactccagg
    13261 gggccagttg acgtaacgca ttggcaattt gttcaatgct tgtcgcatcg acccacatca
    13321 cttttattcc cggcgaagcc agctggtcaa cctgccgctc ggcattacct ccacgccagg
    13381 caatcaccag atcgggtttc agcgcgacaa tgcgttccag attcatcccc tgccaggtgg
    13441 aaacctgctc aatcttttgc gcttgtggag gatagtcgga atagctgctg accccaaccg
    13501 gcgtgatccc ggcggcaaag gcaagttcag tgttggcggg agaaagcgtg atgacgcgcg
    13561 gtgccgcgtt gagccacagt ggcgcgagaa aagacagggc gaccagcgcc ctgaacagtg
    13621 acttagccat gtgccagttt ctgcaccagt gactcaacca tcaggctgga ctgtttagcg
    13681 gcaacagcca ggaactcatc gaagctaaga tgagactgtt gatcggccac gtcggagatg
    13741 gcgcgtacga caacaaacgg gacgttgaaa ttgtggcaga catgggcgat tgccgtcgct
    13801 tccatctcta cagcaatggc ctgtgggaag ttgtggcgga ttttcgccag accaacagaa
    13861 ccgttgatga aagcgtcgcc gctaacaatc aggccacgta cagcgttaag attcagttcg
    13921 gcaatgcagg cctcagcggc agcgatcagt ttatcgtcag cttcaaagcc tgccggacag
    13981 cctggtaact gaccgtattc ataaccaaat gccgtgacat ccgcgtcgtg ataacgtgct
    14041 tcgtccgaga caacgatatc gcccactttc aacgttggtg ccaggccacc ggcagaaccg
    14101 gtgttaataa tcacatctgg cttgcagtgt tccaacagca aagtggcacc cagcgccgca
    14161 gcgactttac cgatgcccga tttcagaagc gcaacctcgg ttccattcag ttggccggta
    14221 tagatttcgc aaccgccgag actgatagtt tgacgatttt cgattttgtc acgcagcagc
    14281 gtaacttctt cttccattgc accaatgatg ccgattttca tagatttact cgcgataagc
    14341 ccgatttgaa ggcatagttt accatgcgct tacggggaag cgtatttctc acgcgggaga
    14401 ggacatggca cagattgatt tccgaaaaaa aataaactgg catcgtcgtt accgttcacc
    14461 gcagggcgtt aaaaccgaac atgagatcct gcggatcttc gagagcgatc gcgggcgtat
    14521 catcaactct ccggcaattc gtcgtctgca acaaaagacc caggtttttc cactggagcg
    14581 caatgccgcc gtgcgcacgc gtcttaccca ctcgatggaa gtccagcagg tggggcgcta
    14641 catcgccaaa gaaattctaa gccgtatgaa agagcttaaa ttactggaag catacggcct
    14701 ggatgaactg accggcccct ttgaaagcat tgttgagatg tcatgcctga tgcacgatat
    14761 cggcaatccg ccgtttggtc attttggcga agcggcgata aatgattggt ttcgccagcg
    14821 tttgcacccg gaagatgccg aaagccagcc tctgactgac gatcgctgca gcgtggcggc
    14881 actacgttta cgggacgggg aagaaccgct taacgagctg cggcgcaaga ttcgtcagga
    14941 cttatgtcat tttgagggga atgcacaagg cattcgtctg gtgcatacat tgatgaggat
    15001 gaatctcacc tgggcacagg ttggcggtat tttaaaatat acccgtccgg cgtggtggcg
    15061 tggcgaaacg cctgagacac atcactattt aatgaaaaag ccgggttatt atctttctga
    15121 agaagcctat attgcccggt tgcgtaaaga acttaatttg gcgctttaca gtcgttttcc
    15181 attaacgtgg attatggaag cagccgacga catctcctat tgtgtggcag accttgaaga
    15241 tgcggtagag aaaagaatat ttaccgttga gcagctttat catcatttgc acgaagcgtg
    15301 gggccagcat gagaaaggtt cgctcttttc gctggtggtt gaaaatgcct gggaaaaatc
    15361 acgctcaaat agtttaagcc gcagtacgga agatcagttt tttatgtatt tacgggtaaa
    15421 caccctaaat aaactggtac cctatgcggc acaacgattt attgataatc tgcctgcgat
    15481 tttcgccgga acgtttaatc atgcattatt ggaagatgcc agcgaatgca gcgatcttct
    15541 taagctatat aaaaatgtcg ctgtaaaaca tgtgtttagc catccagatg tcgagcagct
    15601 tgaattgcag ggctatcggg tcattagcgg attattagag atttatcgtc ctttattaag
    15661 cctgtcgtta tccgacttta ctgaactggt agaaaaagaa cgggtgaaac gtttccctat
    15721 tgaatcgcgc ttattccaca aactctcgac gcgccatcgg ctggcctatg tcgaggctgt
    15781 cagtaaatta ccgtcagatt ctcctgagtt tccgctatgg gaatattatt accgttgccg
    15841 cctgctgcag gattatatca gcggtatgac cgacctctat gcgtgggatg aataccgacg
    15901 tctgatggcc gtagaacaat aaccaggctt ttgtaaagac gaacaataaa tttttacctt
    15961 ttgcagaaac tttagttcgg aacttcgcgc tataaaacga atctgaagaa cacagcaatt
    16021 ttgcgttatc tgttaatcga gactgaaata catgaaaaaa accacattag cactgagtgc
    16081 actggctctg agtttaggtt tggcgttatc tccgctctct gcaacggcgg ctgagacttc
    16141 ttcagcaacg acagcccagc agatgccaag ccttgcaccg atgctcgaaa aggtgatgcc
    16201 ttcagtggtc agcattaacg tagaaggtag cacaaccgtt aatacgccgc gtatgccgcg
    16261 taatttccag cagttcttcg gtgatgattc tccgttctgc caggaaggtt ctccgttcca
    16321 gagctctccg ttctgccagg gtggccaggg cggtaatggt ggcggccagc aacagaaatt
    16381 catggcgctg ggttccggcg tcatcattga tgccgataaa ggctatgtcg tcaccaacaa
    16441 ccacgttgtt gataacgcga cggtgattaa agtccagctg agcgatggcc gtaagttcga
    16501 cgcgaagatg gtcggcaaag atccgcgctc tgatatcgcg ctgatccaaa tccagaaccc
    16561 gaaaaacctg accgcaatta agatggcgga ttctgatgca ctgcgcgtgg gtgattacac
    16621 cgtagcgatt ggtaacccgt ttggtctggg cgagacggta acttccggga ttgtctctgc
    16681 gctggggcgt agcggcctga atgctgaaaa ctacgaaaac ttcatccaga ccgatgcagc
    16741 gatcaaccgt ggtaactccg gtggtgcgct ggttaacctg aacggcgaac tgatcggtat
    16801 caacaccgcg atcctcgcac cggacggcgg caacatcggt atcggttttg caatcccgag
    16861 caacatggtg aaaaacctga cctcgcagat ggtggaatac ggccaggtga aacgcggtga
    16921 gctgggtatt atggggactg agctgaactc cgaactggcg aaagcgatga aagttgacgc
    16981 ccagcgcggt gctttcgtaa gccaggttct gcctaattcc tccgctgcaa aagcgggcat
    17041 taaagcgggt gatgtgatca cctcactgaa cggtaagccg atcagcagct ttgccgcact
    17101 gcgtgctcag gtgggtacta tgccggtggg cagcaaactg accctgggct tactgcgcga
    17161 cggtaagcag gttaacgtga acctggaact gcagcagagc agccagaatc aggttgattc
    17221 cagctccatc ttcaacggca ttgaaggcgc tgagatgagc aacaaaggca aagatcaggg
    17281 cgtggtagtg aacaacgtga aaacgggcac tccggctgcg cagatcggcc tgaagaaagg
    17341 tgatgtgatt attggcgcga accagcaggc agtgaaaaac atcgctgaac tgcgtaaagt
    17401 tctcgacagc aaaccgtctg tgctggcact gaacattcag cgcggcgaca gcaccatcta
    17461 cctgttaatg cagtaatctc actcaacccc ttcctgaaaa cgggaagggg ttctccttac
    17521 aatctgtgaa cttcaccaca actccataca tcttcatcat cctttaggca tttgcacaat
    17581 gccgtacgtt acgtacttcc ttatgctaag ccgtgcataa cggaggactt atggctggca
    17641 tcttgatacc aaaatggcgc aggatatcgt ggcacgtacc atgcgcatca tcgataccaa
    17701 tatcaacgta atggatgccc gtgggcgaat tatcggcagc ggcgatcgtg agcgtattgg
    17761 tgaattgcac gaaggtgcat tgctggtact ttcacaggga cgagtcgtcg atatcgatga
    17821 cgcggtggca cgtcatctgc acggtgtgcg gcaagggatt aatctaccgt tacggctgga
    17881 aggtgaaatt gtcggcgtaa ttggcctgac aggtgaacca gagaatctgc gtaaatatgg
    17941 cgaactggtc tgcatgacgg ctgaaatgat gctggaacag tcgcggttga tgcacttgtt
    18001 ggcgcaggat agccgtttgc gggaggaact ggtgatgaac ctgattcagg cagaggagaa
    18061 tactcccgca cttactgaat gggcgcaacg gctggggatc gatctcaatc aaccgcgagt
    18121 ggtggctatt gttgaggtcg acagcggtca gcttggtgtg gacagcgcaa tggcggagtt
    18181 acaacaactg caaaacgcgc tgactacgcc cgagcgtaat aatctggtgg cgattgtctc
    18241 gctaaccgaa atggtggtgt tgaaaccggc gttgaactct tttgggcgct gggatgcaga
    18301 agatcatcgt aagcgagttg aacaactgat tacccgcatg aaagagtacg gccggctgcg
    18361 ttttcgcgtt tcactgggca actattttac cggtcctggc agtattgccc gatcctatcg
    18421 tacggcgaaa acgacgatgg tggtgggtaa acagcggatg ccagaaagtc gctgctattt
    18481 ttatcaggat ctgatgttac ctgtgttact cgacagtttg cgtggcgact ggcaggccaa
    18541 cgaactggcg cgaccgctgg cgcggctgaa agcgatggac aataacggct tgctgcgacg
    18601 aacgctggcg gcgtggtttc gtcacaatgt gcaaccgctg gcaacgtcaa aggcgttgtt
    18661 tatttatcgt aataccctgg agtatcggct taatcgtata tcggaactga ccgggcttga
    18721 tttgggcaat tttgatgaca ggttgctgct gtatgtggcg ttacaactgg atgaagagcg
    18781 gtaggttatg cgttaaggtt gaggcggcgc tgtctcattc ccctcagccc gaaggggaga
    18841 ggggaatgcc cgaattaacc gtcaattcgg gattatttac gcgttagttt ttccagatcg
    18901 gcttcaatct cgctgatctt attggttacg actgactcca ggtgacgtaa gtcgtcgagg
    18961 atcttacgct taagatcaac ttcgctgcgg tcacgctggc agatttgatc aagctcatca
    19021 atgatatacc gtagattcgg gctgatttcc tggacttctt tataaccctg acccacacca
    19081 tcagcgacga ccgttttacg ctgacgcgga tatttaaact taacgctctt ggcgaaaaac
    19141 tcgcctttgt ctttctggaa atagattttc agaatatcgt tgttggcttc ctgccggagg
    19201 ctgtaacgat caatttcttc aggattggta atacccagac ttttcagatt gtcgtacata
    19261 gcgttacctc aaaatgagtc agtaaattgt gcttatttta gcatttggcc tagcccgccc
    19321 ggctcgactg tgatcgcaga aagccttttt cttccagact tctatcatgg cgtaaaaatc
    19381 aaaaaattac ctgctttatt gtggtgataa aattcacgtt ctacaccagt tccagcatcg
    19441 ttacttccgg gcggcagttc agacgcaaac catacaaact gcccacgcca cgggttgtgt
    19501 agatgtgtcg ttcgccaaag gcatttaatc cggcgacgta acgtttatct tcgacagggg
    19561 caaaaggttc accaaccaac ggtacgcgca gttgcccgcc gtgagtatgg ccgcacagca
    19621 tcagatccca gggttcatca cgcatgactt ctttgctgtc gggattatgt gccagcatca
    19681 gtcttggcag atttgcttcg ctggcgggag gtggtttgca ttgtccggcc cataagtcac
    19741 cggtgcctac cagttcgaat tgcctgttcg gcgtggcgat caccgtagcc tggttaaaca
    19801 acaccgtgat gcccactgat ttcaacgtct cgccaattaa gtgatttttt tctgtaccaa
    19861 cagggcgatc gtggttgccg aagcaggcaa acgtcggcgc acattcggca aggggggaga
    19921 ggacatcact aaacgccgaa aaattcagcg gcatatcaaa taatacgtaa tcgccgccca
    19981 gtaatatcaa atcgggcttt tgttctatgc caagagcaat cgcgtcagaa atcaggctta
    20041 aaggaacaaa acgagagtaa tggagatcgg ccagaaaaag aattttgaat ggtgctgcgt
    20101 tgtctttaaa aaaggcgagg cggtgacgga ttaattcaaa ccagcctggc tcccagtaat
    20161 gcatataacc gaaacctgag ctcgtggcta tcgtcgcggc agtagcctgc aacaatcggc
    20221 ggcgtgaaat catcgctcat ccctgcaaaa aaaatcgggc agcgtcgtgc tgcccgtgtg
    20281 catactttta gtcgatggta cgcagcagtt cgttaatgcc gactttgccg cgagttttcg
    20341 cgtcaacttt cttaacgata accgcacagt agaggctgta tttgccatct tttgacggca
    20401 gattacctga aacaaccaca gaccccgccg gaacgtgacc gtagtggatt tcgccggttt
    20461 cacggtcgta aatacgggtg ctctgaccaa tgtatacgcc catggaaatg acggaacctt
    20521 cttcgacaat caccccttca actacttcag agcgtgcgcc aatgaagcag ttatcttcaa
    20581 tgatggttgg gttagcctgc agcggttcca gcacgccgcc gatgcccacg ccaccggaaa
    20641 ggtggacgtt tttaccaatc tgcgcacaag aaccgacggt cgcccaggta tcaaccatgg
    20701 tgccttcatc aacatatgcg ccgatgttga cgtaagacgg catcagcacg gtgttacggg
    20761 caataaacgc accctgacgt accgccgctg gtggcacaac gcggaagcct tctttctgga
    20821 aacgtgcttc gtcgtagtcg gcgaatttca ttggcacttt gtcgaagtag cggctttctg
    20881 ccccttcgat cacctgatta tcattaatac ggaaagagag cagcaccgct tttttcaacc
    20941 actgatgcgt cacccactga ccgtcaattt tttccgctac acgcagtgca ccggaatcca
    21001 gcagggcgat cacctgattt accgcttcgc gggtaacggt gtctgcgttg gttggcgtga
    21061 tctcggcacg gcgttcaaaa gcggtttcaa taatgttctg taactgctgc attgttaaac
    21121 tcttttcata tcagtaaaca catcaccctt tatcgtttgg attgagggcc tctgtcaacc
    21181 gctgatgcac ttcctgctgc aactcgttat taagcgcacg ccggtcagcg gtggcaatta
    21241 tgaataaatc ttctactcgc tcgccaatgg ttgtaattcg ggcaccatga agcgaaattc
    21301 ccagatcggc aaaaattttc ccgactctcg ccagcagtcc tggctggtcg agcgcgataa
    21361 gctcaaggaa cgatttgcgg tcggtatggg tcggcaaaaa cgttacttcg gtttcaacag
    21421 taaaatggcg taatttggcg ggttggcgac ggggctgcgg tggctgccag ctactttgcg
    21481 tcagtacttg ctccagacca aaccgaataa cctcatgacg atctgcggac agcgggctgc
    21541 catcgggttc cagcacgata aaggtatcca tcgccatacc gtcgcgagtg gtgaaaattt
    21601 gtgcgtcgtg aacacttaaa ttgcggcggt ctaattcggc acagacggcg gcaaacagat
    21661 aggggcggtc cgggctccag ataaaaatct cggtgcctcc acgcgtagcc tgcgggctaa
    21721 gcaataccag tggtttgctt aaatcatgct gtaataaatg gcgggcatgc caggccagtt
    21781 gatttgggct atggcggaca aaatagttag cacgacagcg tgaccaaatt tggtgcagcg
    21841 cctcttcgtc gatgttatcc atgcgcagta gtgccagtgc ctggagttgg tgatggcgaa
    21901 cccgttcgcg catatccggc gtgttttgca ttccgcgtcg tagctgcttt tcggtggcaa
    21961 aatagagttc gcgcaacaga ctttgcttcc agctattcca cagcgtttcg ttggtggcgc
    22021 aaatgtcagc cactgtcagg cataccagat agcgcagacg attttccgtt tgaacttctt
    22081 cggcaaactg cttgatgact tcagggtcct gaatatcgcg gcgttgtgct gtcaccgaca
    22141 tcagcaagtg ctggcgaacc agccaggcaa ccagctgtgt ttcgcgtgag ttcagcccgt
    22201 ggagttctgc aaaatgcact acatcctgag caccgagaat ggagtggtcg ccgccgcgtc
    22261 ctttggcgat atcgtgaaac agcgcggcga tgaaaatcag ctcagttgac ggcaggcgcg
    22321 gccagacgtc cacacacaac ggatggcgct ggcgcgtttc ttcactggca aaactctcca
    22381 gtttcagcat cacgcggata gtatgttcat ccaccgtgta ggcgtggaac agatcaaact
    22441 gcatctgccc gacgatatgc gaccattgcg gcatatacgc gccgagcacg ctatggcgat
    22501 gcattggcaa tagcccgcgc cgcaccgctc cggggtgacg cagaatgctc aaaaacagtt
    22561 ttcgtgcttc cggaatatta cacagcggtt gttgcagatg gcgacgggca tggcgtaact
    22621 ggcgcagcgt ggtggagtaa atgccggtga tcgcactgtt gcgcaccatg gtgtagaaca
    22681 tacgcaagat ggcttccggc tggcgcataa atagtgtttc atcacgcagg tcgattagcg
    22741 taccgcgtag ctgaaactca tcgtcgattg gacgtggttt ttcgtcggca ggaagggcga
    22801 ggatggcttc atcgaacagt tgcagcagca tctggttgag ttcactgacg cggcgtgtaa
    22861 cgcggaagta atccttcatc atccgctcga ccggttcgtt gccttcacca ctgtaattca
    22921 gacgctgagc gacgctaagt tggcgatcga ataacaggcg attatcgtaa cggctgacga
    22981 ccagatgcag ggcaaagcga atacgccaca gtatatgcag acattcgttt aattccgccc
    23041 gctccgctga ggttaagaag ccaaacccaa ccatttcatc cagcgatgtt gcgccaaaat
    23101 gacggcgggc cacccattgc agagtgtgga tatcgcgcaa gccgccaggg ctacttttga
    23161 tgtctggttc aagattgtag ctggtgccgt ggtaacgctg atggcgctgg ttctgttctt
    23221 caactttcgc cgcgtagaac ttgtcggaag gccagaatcc ttcgctaaaa atatgttttt
    23281 gcagttcgag gaagagcgca acatcgccaa ttaataagcg ggattcgatt aaattggtgg
    23341 cgacggttaa atccgataac ccttccagca tgcactcttc aagcgtgcgc acactatgac
    23401 cgacttccag ctttacatcc cagagcagcg ttaacagctc gcccactttt tgcgcctgat
    23461 cgtccgggag ctttttacgg cttaaaatca gtaaatcgat gtcagaaagt ggatgcagct
    23521 cgccacgacc gtagccaccg acggcgacca atgccaggtc ggcaatctgg ctgaatcccg
    23581 cttcaatcca taatcgttgc aggagctggt cgataaactc ggtgcgcgcc tcaatcaact
    23641 gttctgcaga gatcccattg tcaaaggcat cacccagcca acgctggaaa gtatcgatat
    23701 gggcttttat cccaccgacg gttaattcat cacggggcca gacgcatgga ttttgcggtt
    23761 gaccgggcag ggtggggaga gcggtgtttg cgtactgttc tggaagggta ttcattgtgc
    23821 gccactcata agattaaatt atcgcattaa aaaagccggc attcgccggc ttcatcttat
    23881 tcgtcgtgcg agattatcgc cgggatggtg tcatccttgc gtagcgtcag aatttcgcag
    23941 ccgttatcag tcaccacaat agtatgctca tattgtgcag acaagctgcg atctttggtt
    24001 tttaccgtcc agccatcttt catggtgcgg atctcttttt tacccgcgtt gaccattggc
    24061 tcgatggtga acgtcatccc aggtttcagt acgacgttgg tttcacggga gtcatagtgc
    24121 agcacctgcg gttcttcatg gaagccgcga ccaataccgt gtccgcaata ttcacgaacg
    24181 acggagaagc cttctgcttc gacaaacttc tgaatcgccg caccgatttc gcgcaggtta
    24241 atgcctggtt tgaccatgcg cagcgccagg tacaggcttt cttgcgtgat gcggcacaga
    24301 cgttcgccca tgatggtcgg cttaccgacg ataaacattt tcgaggtatc gccgtggaaa
    24361 ccatctttga ttacggtgac atcaatgtta acgatatcgc catctttcag cagcttcgca
    24421 tcgtccggga taccgtggca caccacttca ttaatagaga tgcaaacgga tttcggatag
    24481 ccgtgatagc cgaggcaggc agaaaccgcg tgttgttcat taacaatgta atcattacag
    24541 atgcgatcca gctcgccggt gctgacgccc ggtttaacat acggttcgat catctccagc
    24601 acttcggcag ccagtcggcc agcgacgcgc attttttcga tatcttctgg ggtcttgatt
    24661 gagatagcca ttaattctgt ccatcagcgt cggtgatacc gacaatatat atgtaagtgc
    24721 cgtcaatggt atcacacccg ggcaaattga gaatcattct gaatttcgcc aaacgtgcca
    24781 ctgaacgttt tctataatag aaaattcaac gtctgatgct gtacacagcg ccaacaatta
    24841 ttggtgtcca tgacgtattt gtggtataaa gcgcgccgga cttccgatcc atttcgtata
    24901 cacagactgg acggaagcga caatctcact ttgtgtaaca acacacacgt atcggcacat
    24961 attccggggt gccctttggg gtcggtaata tgggatacgt ggaggcataa ccccaacttt
    25021 tatatagagg ttttaatcat ggcaactgtt tccatgcgcg acatgctcaa ggctggtgtt
    25081 cacttcggtc accagacccg ttactggaac ccgaaaatga agccgttcat cttcggtgcg
    25141 cgtaacaaag ttcacatcat caaccttgag aaaactgtac cgatgttcaa cgaagctctg
    25201 gctgaactga acaagattgc ttctcgcaaa ggtaaaatcc ttttcgttgg tactaaacgc
    25261 gctgcaagcg aagcggtgaa agacgctgct ctgagctgcg accagttctt cgtgaaccat
    25321 cgctggctgg gcggtatgct gactaactgg aaaaccgttc gtcagtccat caaacgtctg
    25381 aaagacctgg aaactcagtc tcaggacggt actttcgaaa agctgaccaa gaaagaagcg
    25441 ctgatgcgca ctcgtgagct ggagaaactg gaaaacagcc tgggcggtat caaagacatg
    25501 ggcggtctgc cggacgctct gtttgtaatc gatgctgacc acgaacacat tgctatcaaa
    25561 gaagcaaaca acctgggtat tccggtattt gctatcgttg ataccaactc tgatccggac
    25621 ggtgttgact tcgttatccc gggtaacgac gacgcaatcc gtgctgtgac cctgtacctg
    25681 ggcgctgtag ctgcaaccgt acgtgaaggc cgttctcagg atctggcttc ccaggcggaa
    25741 gaaagcttcg tagaagctga gtaataaggc ttgataactc ccccaaaata gttcgagttg
    25801 cagaaaggcg gcaagctcga gaattcccgg gagcttacat cagtaagtga ccgggatgag
    25861 cgagcgaaga taacgcatct gcggcgcgaa atatgaaggg ggagagccct tatagaccag
    25921 gtagtacacg tttggttagg gggcctgcat atggccccct ttttcacttt tatatctgtg
    25981 cggtttaatg ccgggcagat cacatctccg aggattttag aatggctgaa attaccgcat
    26041 ccctggtaaa agagctgcgt gagcgtactg gcgcaggcat gatggattgc aaaaaagcac
    26101 tgactgaagc taacggcgac atcgagctgg caatcgaaaa catgcgtaag tccggtgcta
    26161 ttaaagcagc gaaaaaagca ggcaacgttg ctgctgacgg cgtgatcaaa accaaaatcg
    26221 acggcaacta cggcatcatt ctggaagtta actgccagac tgacttcgtt gcaaaagacg
    26281 ctggtttcca ggcgttcgca gacaaagttc tggacgcagc tgttgctggc aaaatcactg
    26341 acgttgaagt tctgaaagca cagttcgaag aagaacgtgt tgcgctggta gcgaaaattg
    26401 gtgaaaacat caacattcgc cgcgttgctg cgctggaagg cgacgttctg ggttcttatc
    26461 agcacggtgc gcgtatcggc gttctggttg ctgctaaagg cgctgacgaa gagctggtta
    26521 aacacatcgc tatgcacgtt gctgcaagca agccagaatt catcaaacca gaagacgtat
    26581 ccgctgaagt ggtagaaaaa gaataccagg tacagctgga tatagcgatg cagtctggta
    26641 agccgaaaga aatcgcagag aaaatggttg aaggccgcat gaagaaattc accggcgaag
    26701 tttctctgac cggtcagccg ttcgttatgg aaccaagcaa aactgttggt cagctgctga
    26761 aagagcataa cgctgaagtg actggcttca tccgcttcga agtgggtgaa ggcatcgaga
    26821 aagttgagac tgactttgca gcagaagttg ctgcgatgtc caagcagtct taattatcaa
    26881 aaaggagccg cctgagggcg gcttcttttt gtgcccatct tgtaaattca gctaaccctt
    26941 gtggggctgc gctgaaaagc gacgtacaat gtcgctagta ttaattcatt tcaatcgttg
    27001 acagtctcag gaaagaaaca tggctaccaa tgcaaaaccc gtctataaac gcattctgct
    27061 taagttgagt ggcgaagctc tgcagggcac tgaaggcttc ggtattgatg caagcatact
    27121 ggatcgtatg gctcaggaaa tcaaagaact ggttgaactg ggtattcagg ttggtgtggt
    27181 gattggtggg ggtaacctgt tccgtggcgc tggtctggcg aaagcgggta tgaaccgcgt
    27241 tgtgggcgac cacatgggga tgctggcgac cgtaatgaac ggcctggcaa tgcgtgatgc
    27301 actgcaccgc gcctatgtga acgctcgtct gatgtccgct attccattga atggcgtgtg
    27361 cgacagctac agctgggcag aagctatcag cctgttgcgc aacaaccgtg tggtgatcct
    27421 ctccgccggt acaggtaacc cgttctttac caccgactca gcagcttgcc tgcgtggtat
    27481 cgaaattgaa gccgatgtgg tgctgaaagc aaccaaagtt gacggcgtgt ttaccgctga
    27541 tccggcgaaa gatccaaccg caaccatgta cgagcaactg acttacagcg aagtgctgga
    27601 aaaagagctg aaagtcatgg acctggcggc cttcacgctg gctcgtgacc ataaattacc
    27661 gattcgtgtt ttcaatatga acaaaccggg tgcgctgcgc cgtgtggtaa tgggtgaaaa
    27721 agaagggact ttaatcacgg aataattccc gtgatggata aataagggta agattccgcg
    27781 taagtatcgc gggggcgtaa gtctggttat aaggcgttat tgttgcaggc agtttggtca
    27841 cggccagcgc gcagcaaccg gagcgtacaa aagtacgtga ggatggcgag cactgctcgg
    27901 ggccaaaatg gcaaataaaa tagcctaata atccagacga ttacccgtaa tatgtttaat
    27961 cagggctata cttagcacac ttccactgtg tgtgactgtc tggtctgact gagacaagtt
    28021 ttcaaggatt cgtaacgtga ttagcgatat cagaaaagat gctgaagtac gcatggacaa
    28081 atgcgtagaa gcgttcaaaa cccaaatcag caaaatacgc acgggtcgtg cttctcccag
    28141 cctgctggat ggcattgtcg tagaatatta cggcacgccg acgccgctgc gtcagctggc
    28201 aagcgtaacg gtagaagatt cccgtactct gaaaatcaac gtgtttgatc gttcaatgtc
    28261 tccggccgtt gaaaaagcga ttatggcgtc cgatcttggc ctgaacccga actctgcggg
    28321 tagcgacatc cgtgttccgc tgccgccgct gacggaagaa cgtcgtaaag atctgaccaa
    28381 aatcgttcgt ggtgaagcag aacaagcgcg tgttgcagta cgtaacgtgc gtcgtgacgc
    28441 gaacgacaaa gtgaaagcac tgttgaaaga taaagagatc agcgaagacg acgatcgccg
    28501 ttctcaggac gatgtacaga aactgactga tgctgcaatc aagaaaattg aagcggcgct
    28561 ggcagacaaa gaagcagaac tgatgcagtt ctgatttctt gaacgacaaa aacgccgctc
    28621 agtagatcct tgcggatcgg ctggcggcgt tttgcttttt attctgtctc aactctggat
    28681 gtttcatgaa gcaactcacc attctgggct cgaccggctc gattggttgc agcacgctgg
    28741 acgtggtgcg ccataatccc gaacacttcc gcgtagttgc gctggtggca ggcaaaaatg
    28801 tcactcgcat ggtagaacag tgcctggaat tctctccccg ctatgccgta atggacgatg
    28861 aagcgagtgc gaaacttctt aaaacgatgc tacagcaaca gggtagccgc accgaagtct
    28921 taagtgggca acaagccgct tgcgatatgg cagcgcttga ggatgttgat caggtgatgg
    28981 cagccattgt tggcgctgct gggctgttac ctacgcttgc tgcgatccgc gcgggtaaaa
    29041 ccattttgct ggccaataaa gaatcactgg ttacctgcgg acgtctgttt atggacgccg
    29101 taaagcagag caaagcgcaa ttgttaccgg tcgatagcga acataacgcc atttttcaga
    29161 gtttaccgca acctatccag cataatctgg gatacgctga ccttgagcaa aatggcgtgg
    29221 tgtccatttt acttactggg tctggtggcc ctttccgtga gacgccattg cgcgatttgg
    29281 caacaatgac gccggatcaa gcctgccgtc atccgaactg gtcgatgggg cgtaaaattt
    29341 ctgtcgattc ggctaccatg atgaacaaag gtctggaata cattgaagcg cgttggctat
    29401 ttaacgccag cgccagccag atggaagtgc tgattcaccc gcagtcagtg attcactcaa
    29461 tggtgcgcta tcaggacggc agtgttctgg cgcagctggg ggaaccggat atgcgtacgc
    29521 caattgccca caccatggca tggccgaatc gcgtgaactc tggcgtgaag ccgctcgatt
    29581 tttgcaaact aagtgcgttg acatttgccg caccggatta tgatcgttat ccatgcctga
    29641 aactggcgat ggaggcgttc gaacaaggtc aggcagcgac gacagcattg aatgccgcaa
    29701 acgaaatcac cgttgctgct tttcttgcgc aacaaatccg ctttacggat atcgctgcgt
    29761 tgaatttatc ggtactggaa aaaatggata tgcgcgaacc acaatgtgtg gacgatgtgt
    29821 tatctgttga tgcgaacgcg cgtgaagtcg ccagaaaaga ggtgatgcgt ctcgcaagct
    29881 gaggataatc cggctacaga gagtctcgct atttgttagc gtagggcttc agtgatatag
    29941 tctgcgccat ctgatcgtaa gtagttggct ttataaggtc aggtatgccg tggttttgca
    30001 cggctttttt tgtataggct tcagtattcc tgagtaccgt aaaccctgtc agggaataaa
    30061 aaacgcgtga tgttgtctgc tactcaacta cttagcgaaa aattgccagc gcatggctgc
    30121 cgtcatgttg cgatcattat ggacggcaat ggtcgctggg caaaaaagca agggaagatt
    30181 cgtgcctttg ggcataaagc cggggcaaaa tccgtccgcc gggctgtctc ttttgcggcc
    30241 aacaacggta ttgaggcgtt aacgctgtat gcctttagta gtgaaaactg gaaccgacca
    30301 gcgcaggaag tcagtgcgtt aatggaactg tttgtgtggg cgctcgatag cgaagtaaaa
    30361 agtctgcacc gacataacgt gcgtctgcgt attattggcg ataccagtcg ctttaactcg
    30421 cgtttgcaag aatgtattcg taaatctgaa gcgctaacag ccgggaatac cggtctgacg
    30481 ctgaatattg cggcgaacta cggtggacgt tgggatatag tccagggagt caggcaactg
    30541 gctgaaaagg tgcagcaagg aaacctgcaa ccagatcaga tagatgaaga gatgctaaac
    30601 cagcatgtct gtatgcatga actggcccct gtagatttag taattaggac tgggggggag
    30661 catcgcatta gtaacttttt gctttggcaa attgcctatg ccgaacttta ctttatagat
    30721 gttctctggc ccgatttcga tgaacaagac tttgaagggg cgttaaatgc ctttgctaat
    30781 cgagagcgtc gtttcggcgg caccgagccc ggtgatgaaa cagcctgatg gggggcgctt
    30841 ttgctgaagt atcgcctgat atctgctttt gtgttaatac ccgtcgtcat cgcggcgttg
    30901 tttctgttgc cgccggtggg gttcgccatt gtaacgctgg tggtctgcat gctggcagcg
    30961 tgggaatggg gacagcttag cggttttacc actcgttcgc agcgagtatg gttggcggtg
    31021 ttatgcgggt tattgttggc gctgatgctt tttctgttgc cggaatatca ccgaaatatt
    31081 catcaaccgc tggttgaaat ctcactttgg gcttcgctgg gttggtggat tgtctcgcta
    31141 ttgctggtgc tgttttaccc aggttccgca gcaatctggc gtaactctaa aacattgcgc
    31201 cttatttttg gcgtgctaac cattgttccc ttcttctggg gcatgctggc gttacgggcc
    31261 tggcactatg acgagaatca ttacagtggc gcaatatggc tgctctatgt catgatcctg
    31321 gtatggggcg ctgactccgg cgcatatatg tttggcaaat tgtttggtaa acataagctg
    31381 gcaccgaagg tttctccggg taaaacctgg caaggcttta taggtggact cgctactgca
    31441 gcggtaatct catggggtta tggcatgtgg gcgaatctcg acgtcgctcc cgtcacctta
    31501 ctcatttgct ctattgtcgc agcgttagcc tcagtgctcg gcgatctgac cgagagtatg
    31561 tttaagcgtg aagcaggaat taaggacagc ggtcatttaa ttccaggaca cggtggtatt
    31621 ttagatcgta ttgatagcct gacggctgcg gtaccggtct ttgcttgctt gttgttactg
    31681 gtattcagga cgctttaacg gaaggtaata tgctgagttt tctctgggat ttggcttcgt
    31741 tcatcgttgc actgggtgta cttatcactg tgcatgaatt tggtcatttc tgggttgccc
    31801 ggcgttgtgg tgttcgcgtt gagcgtttct caatagggtt tggtaaggcg ctctggcggc
    31861 gaactgataa gctcggcacc gaatatgtta tcgccctgat cccgctgggc ggttatgtca
    31921 aaatgctgga tgagcgcgca gaaccggtcg ttccggaact ccgccaccat gccttcaata
    31981 ataaatctgt tggccaacga gcggcgatta ttgccgcagg tccggttgca aacttcattt
    32041 ttgctatctt tgcctactgg ctggttttta ttattggtgt gcctggcgta cgtccggtgg
    32101 ttggtgaaat agcagccaat tcgatagctg cggaagcaca aattgcacca ggtacggaac
    32161 taaaagccgt agatggtatc gaaacgcctg attgggatgc cgtgcgtttg cagttggtcg
    32221 ataaaattgg cgatgaaagc accaccatta cagtagcgcc atttggcagc gaccaacggc
    32281 gggatgtaaa gctcgattta cgtcactggg cgtttgagcc tgataaagaa gatccggtat
    32341 cttcgctggg gattcgtcct cgtgggctgc aaattgaacc tgtactggaa aatgtgcagc
    32401 caaactcggc ggcaagcaag gcaggtttgc aagcaggcga caggatcgtt aaagtcgatg
    32461 gtcagccctt aacgcagtgg gtgacctttg tgatgcttgt ccgggataac ccggggaaat
    32521 ccttagcgtt agaaatcgaa aggcagggaa gtcccttgtc tttgacatta atcccggaga
    32581 gtaaaccggg taatggtaaa gcgattggtt ttgtcggtat tgagccgaaa gtcattcctt
    32641 tgccagatga gtataaagtt gtacgccagt atgggccgtt caacgccatc gtcgaagcca
    32701 cggacaaaac gtggcagctg atgaagctga cggtcagtat gctgggaaaa ttgatcaccg
    32761 gtgatgtgaa actgaacaac ctcagtgggc cgatctctat cgccaagggg gctgggatga
    32821 cagcggaact cggggtagtt tattacctgc cgtttcttgc gcttattagc gtgaacttag
    32881 ggataattaa cctgtttccg ttgcccgtac ttgacggggc gcatctgctg ttccttgcga
    32941 tcgaaaagat caagggcgga ccggtatccg agcgggttca agacttttgt tatcgcattg
    33001 gctcgattct gctggtgctg ttaatggggc ttgcactttt caatgatttc tctcggttat
    33061 gagagttagt taggaagaac gcataataac gatggcgatg aaaaagttgc tcatagcgtc
    33121 gctgctgttt agcagcgcca ccgtatacgg tgctgaaggg ttcgtagtga aagatattca
    33181 tttcgaaggc cttcagcgtg tcgccgttgg tgcggccctc ctcagtatgc cggtgcgtac
    33241 aggcgacacg gttaatgatg aagatatcag taataccatt cgcgctctgt ttgctaccgg
    33301 caactttgag gatgttcgcg tccttcgtga tggtgatacc cttctggttc aggtaaaaga
    33361 acgtccgacc attgccagca ttactttctc cggtaacaaa tcggtgaaag atgacatgct
    33421 gaagcaaaac ctcgaggctt ctggtgtgcg tgtgggcgaa tccctcgatc gcaccaccat
    33481 tgccgatatc gagaaaggtc tggaagactt ctactacagc gtcggtaaat atagcgccag
    33541 cgtaaaagct gtcgtgaccc cgctgccgcg caaccgtgtt gacctaaaac tggtgttcca
    33601 ggaaggtgtg tcagctgaaa tccagcaaat taacattgtt ggtaaccatg ctttcaccac
    33661 cgacgaactg atctctcatt tccaactgcg tgacgaagtg ccgtggtgga acgtggtagg
    33721 cgatcgtaaa taccagaaac agaaactggc gggcgacctt gaaaccctgc gcagctacta
    33781 tctggatcgc ggttatgccc gtttcaacat cgactctacc caggtcagtc tgacgccaga
    33841 taaaaaaggt atttacgtca cggtgaacat taccgaaggc gatcagtaca agctttctgg
    33901 cgttgaagtg agcggcaacc ttgccgggca ctccgctgaa attgagcagc tgactaagat
    33961 cgagccgggc gagctgtata acggcaccaa agtgaccaag atggaagatg acatcaaaaa
    34021 gcttctcggt cgctatggtt atgcctatcc gcgcgtacag tcgatgcctg aaattaacga
    34081 tgccgacaaa accgttaaat tacgcgtgaa cgttgatgcg ggtaaccgtt tctacgtgcg
    34141 taagatccgt tttgaaggta acgatacctc gaaagatgcc gtcctgcgtc gcgaaatgcg
    34201 tcagatggaa ggtgcatggc tgggaagcga tctggtcgat cagggtaagg agcgtctgaa
    34261 tcgtctgggc ttctttgaaa ctgtcgatac cgatacccaa cgtgttccgg gtagcccgga
    34321 ccaagtagat gtagtctaca aggtgaaaga acgtaacacc ggtagcttca acttcgggat
    34381 tggttacggt actgaaagtg gcgtgagctt ccaggctggc gtgcaacagg ataactggtt
    34441 aggtacaggt tatgctgttg gtatcaacgg gaccaaaaac gattaccaga cctatgctga
    34501 attgtcggta accaacccgt acttcactgt agatggtgta agcctcggtg gtcgtctctt
    34561 ctataatgac ttccaggcag atgacgccga cctgtccgac tataccaaca agagttatgg
    34621 tacagacgtg acgttgggct tcccgatcaa cgaatataac tcgctgcgtg caggtctggg
    34681 ttatgtacat aactccctgt ccaacatgca gcctcaggtt gcgatgtggc gttatctgta
    34741 ctctatgggt gaacatccga gcacctctga tcaggataac agcttcaaaa cggacgactt
    34801 cacgttcaac tatggttgga cctataacaa gcttgaccgt ggttacttcc cgacagatgg
    34861 ttcacgtgtc aacctgaccg gtaaagtgac cattcctgga tcggataacg aatactacaa
    34921 agtgacgtta gacacggcga cttatgtgcc gatcgatgac gatcacaaat gggttgttct
    34981 ggggcgtacc cgctggggtt atggtgatgg tttaggcggc aaagagatgc cgttctacga
    35041 gaacttctat gccggtggtt ccagcaccgt ccgtggcttc cagtccaata ccattggtcc
    35101 gaaagcagtt tacttcccgc atcaggccag taattatgat ccggactatg attacgaatg
    35161 tgcgactcag gacggcgcga aagacctgtg taaatcggat gatgctgtag gcggtaacgc
    35221 catggcggtt gccagcctcg agttcatcac cccgacgccg tttattagcg ataagtatgc
    35281 taactcggtt cgtacttcct tcttctggga tatgggtacc gtttgggata caaactggga
    35341 ttccagccaa tattctggat atccggacta tagtgatcca agcaatatcc gtatgtctgc
    35401 gggtatcgca ttacaatgga tgtccccatt ggggccgttg gtgttctcct acgcccagcc
    35461 gttcaaaaag tacgatggag acaaggcaga acagttccag tttaacatcg gtaaaacctg
    35521 gtaagtgttc tccacaaagg aatgtagtgg tagtgtagcg atgactttag gcgatcaata
    35581 taagatcgcc gggccacgca aagaactgca ccctccggtg caaatgggat ggtaaggagt
    35641 ttattgtgaa aaagtggtta ttagcggcag gtctcggttt agcactggca acttctgctc
    35701 aggcggctga caaaattgca atcgtcaata tgggcagcct gttccagcag gtagcgcaga
    35761 aaaccggtgt ttctaacacg ctggaaaatg agttcaaagg ccgtgccagc gaactgcagc
    35821 gtatggaaac cgatctgcag gctaaaatga aaaagctgca gtccatgaaa gcgggcagcg
    35881 atcgcactaa gctggaaaaa gacgtgatgg ctcagcgcca gacttttgct cagaaagcgc
    35941 aggcttttga gcaggatcgc gcacgtcgtt ccaacgaaga acgcggcaaa ctggttactc
    36001 gtatccagac tgctgtgaaa tccgttgcca acagccagga tatcgatctg gttgttgatg
    36061 caaacgccgt tgcttacaac agcagcgatg taaaagacat cactgccgac gtactgaaac
    36121 aggttaaata agtaatgcct tcaattcgac tggctgattt agcgcagcag ttggatgcag
    36181 aactacacgg tgatggcgat atcgtcatca ccggcgttgc gtccatgcaa tctgcacaaa
    36241 caggtcacat tacgttcatg gttaacccaa aataccgtga gcatttaggc ttgtgccagg
    36301 cgtccgcggt tgtcatgacc caggacgatc ttcctttcgc gaaaagtgcc gcgctggtag
    36361 tgaagaatcc ctacctgact tacgcgcgca tggcgcaaat tttagatacc acgccgcagc
    36421 ccgcgcagaa cattgcaccc agtgcggtga tcgacgcgac ggcgaagctg gggaacaatg
    36481 tatcgattgg cgctaacgcg gtgattgaat ccggcgttga actgggcgat aacgtgatta
    36541 tcggtgccgg ttgcttcgta ggtaaaaaca gcaaaatcgg tgcaggttcg cgtctctggg
    36601 cgaacgtaac catttaccat gagatccaga tcggtcagaa ttgcctgatc cagtccggaa
    36661 cagtggtagg cgcagacggc tttggttatg ccaacgatcg tggtaactgg gttaagatcc
    36721 cacagattgg tcgcgtaatt attggcgatc gcgtggagat cggtgcctgc actaccatcg
    36781 atcgcggcgc actggatgac actgttattg gcaatggcgt gatcattgat aaccagtgcc
    36841 agattgcaca taacgtcgtg attggcgaca atacggcggt tgccggtggc gtcattatgg
    36901 cgggcagcct gaaaattggt cgttactgca tgatcggcgg agccagcgta atcaacgggc
    36961 atatggaaat atgcgacaaa gtgacggtta cgggcatggg tatggtgatg cgtcccatca
    37021 ctgaaccagg cgtctattcc tcaggcattc cgctgcaacc caacaaagtc tggcgcaaaa
    37081 ccgctgcact ggtgatgaac attgatgaca tgagcaagcg tctgaaatcg cttgagcgca
    37141 aggttaatca acaagactaa cgttccatct tttgttcgcc aaactttacg gcctgtctca
    37201 ttcttacgat tgcggcaggc cgtgttatta ttgtcgtttc ttatattttg acaggaagag
    37261 tatcttgact actaacactc atactctgca gattgaagag attttagaac ttctgccgca
    37321 ccgtttcccg ttcttactgg tggatcgcgt gctggatttt gaagaaggtc gttttctgcg
    37381 cgcagtaaaa aatgtctctg tcaatgagcc attcttccag ggccatttcc ctggaaaacc
    37441 gattttcccg ggtgtgctga ttctggaagc aatggcacag gcaacaggta ttctggcgtt
    37501 taaaagcgta ggaaaactgg aaccgggtga gctgtactac ttcgctggta ttgacgaagc
    37561 gcgcttcaag cgcccggtcg tgcctggcga tcaaatgatc atggaagtca ctttcgaaaa
    37621 aacgcgccgc ggcctgaccc gttttaaagg ggttgctctg gtcgatggta aagtagtttg
    37681 cgaagcaacg atgatgtgtg ctcgtagccg ggaggcctga tacgtgattg ataaatccgc
    37741 ctttgtgcat ccaaccgcca ttgtggaaga gggcgcgtca attggcgcga acgcacacat
    37801 tggtcctttt tgtatcgttg gaccccatgt cggaattggt gagggtaccg tactgaaatc
    37861 tcacgttgtc gtgaatggtc atactaaaat tggccgcgat aatgagattt atcagttcgc
    37921 ctccatcggc gaagttaacc aggatctgaa atatgctggc gaaccgaccc gtgtggaaat
    37981 cggcgatcgt aaccgcattc gcgaaagcgt caccattcat cgtggcacag tccagggcgg
    38041 tggattgacg aaggtgggca gcgacaactt actgatgatc aacgcgcaca ttgcgcacga
    38101 ttgtacggta ggtaaccgct gtattctcgc caacaacgca acgctggcgg gtcacgtatc
    38161 ggttgacgac ttcgcgatca tcggcggcat gaccgcagtc catcagttct gcatcattgg
    38221 tgcgcacgtg atggttggcg gctgctccgg tgtggcgcag gacgtccctc cttatgtcat
    38281 tgcgcagggt aaccacgcaa cgccgttcgg tgtcaatatc gaagggctga agcgccgcgg
    38341 attcagccgt gaggcgatta ccgctatccg caatgcgtat aagctgattt atcgtagcgg
    38401 taaaacgctc gatgaagtga aaccggaaat tgctgaactg gcggaaacat atccggaagt
    38461 gaaagccttt accgatttct tttcacgctc aacgcgcggt ctgattcgtt aatgactgaa
    38521 cagcgtccat taacgattgc cctggtcgcc ggagaaacct ccggcgatat cctgggggcc
    38581 ggtttaatcc gcgctctgaa agaacgtgtg cccaacgccc gctttgttgg tgttgccggg
    38641 ccacgaatgc aggctgaagg ctgcgaagcc tggtacgaaa tggaagaact ggcggtgatg
    38701 ggcattgttg aagtgctcgg tcgtctgcgt cgcttactgc atattcgtgc cgatctgaca
    38761 aagcgttttg gcgaactgaa gccagatgtt tttgttggta ttgatgcgcc tgacttcaat
    38821 attactcttg aaggtaacct caaaaagcag ggtatcaaaa ccattcatta cgtcagtccg
    38881 tcagtctggg cgtggcgaca gaaacgtgtt ttcaaaatag gcagagccac cgatctggtg
    38941 ctcgcatttc tgcctttcga aaaagcgttt tatgacaaat acaacgtacc gtgccgcttt
    39001 atcggtcata ccatggctga tgccatgcca ttagatccag ataaaaatgc cgcccgtgat
    39061 gtgctgggga tccctcacga tgcccactgc ctggcgttgc taccggggag ccgtggtgca
    39121 gaagttgaaa tgcttagtgc cgatttcctg aaaacggccc agcttttgcg ccagacatat
    39181 ccggatctcg aaatcgtggt gccactggtg aatgccaaac gccgcgagca gtttgaacgc
    39241 atcaaagctg aagtcgcgcg agacttttca gttcatttgc tggatgggat gggccgtgag
    39301 gcgatggtcg ccagcgatgc ggcgctactg gcgtcgggta cggcagccct ggagtgtatg
    39361 ctggcgaaat gcccgatggt ggtgggatat cgcatgaagc cttttacctt ctggttggcg
    39421 aagcggctgg tgaaaactga ttatgtctcg ctgccaaatc tgctggcggg cagagagtta
    39481 gtcaaagagt tattgcagga agagtgtgag ccgcaaaaac tggctgcggc gctgttaccg
    39541 ctgttggcga acgggaaaat cagccacgcg atgcacgata ccttccgtga actgcatcag
    39601 cagatccgct gcaatgccga tgagcaggcg gcacaagccg ttctggagtt agcacaatga
    39661 tcgaatttgt ttatccgcac acgcagctgg ttgcgggtgt ggatgaagtc ggacgcgggc
    39721 cgttagttgg cgcggtcgtc accgctgcgg tgatccttga cccggcgcgc ccgattgccg
    39781 ggctgaatga ttccaaaaag ctgagcgaaa aacgccgtct ggcgctctgt gaagagatca
    39841 aagagaaagc gttgagctgg agtctgggcc gcgcggaacc ccacgaaatc gacgagctga
    39901 acattcttca tgcgaccatg ctggcgatgc agcgtgccgt cgctgggctg catattgcgc
    39961 cggaatatgt gttgattgat ggtaaccgct gcccgaaatt accgatgcct gcgatggctg
    40021 tggtgaaagg cgatagccgc gtaccggaaa tcagtgccgc gtctatcctg gcgaaagtga
    40081 cgcgtgacgc cgaaatggcg gcgctggata ttgttttccc gcaatatggt tttgcccaac
    40141 acaaagggta cccaaccgct tttcatctgg aaaaactggc tgaacacggc gcgaccgaac
    40201 accatcggcg cagctttggg cctgtcaaac gcgcactggg acttgcgtcc tgattcttgt
    40261 gtcgagatta agtaaaccgg aatctgaaga tgtctgaacc acgtttcgta cacctgcggg
    40321 tgcacagcga ctactcgatg atcgatggcc tggccaaaac tgcaccgttg gtaaaaaagg
    40381 cggcggcgtt gggtatgcca gcactggcga tcaccgattt caccaacctt tgtggtctgg
    40441 tgaagttcta cggagcggga catggcgcag ggattaagcc tatcgtcggg gcagatttta
    40501 acgtccagtg cgacctgctg ggtgatgagt taacccacct gacggtactg gcggcgaaca
    40561 ataccggcta tcagaatctg acgttgctga tctcaaaagc gtatcagcgc gggtacggtg
    40621 ccgctgggcc gatcatcgat cgcgactggc ttatcgaatt aaatgaaggg ttgatccttc
    40681 tttccggcgg gcgcatgggc gacgtcggac gcagtctttt gcgtggtaac agcgcgctgg
    40741 tagatgagtg tgtcgcgttt tatgaagaac acttcccgga tcgctatttt ctcgagctga
    40801 tccgcaccgg caggccggat gaagaaagct atctgcacgc ggcggtggaa ctggcggaag
    40861 cgcgcggttt gcccgtcgtg gcgactaacg atgtgcgctt tatcgacagc agcgactttg
    40921 acgcacacga aatccgcgtc gcgatccacg acggctttac cctcgacgat cctaaacgcc
    40981 cgcgtaacta ttcgccgcag caatatatgc gtagcgaaga ggagatgtgt gagctgtttg
    41041 ccgacatccc cgaagccctt gccaacaccg ttgagatcgc caaacgctgt aacgtaactg
    41101 tgcgtcttgg tgaatacttc ctgccgcagt tcccgaccgg ggacatgagc accgaagatt
    41161 atctggtcaa gcgtgcaaaa gagggcctgg aagagcgtct ggccttttta ttccctgacg
    41221 aggaagaacg tgttaagcgc cgcccggaat atgacgaacg tctggagact gaacttcagg
    41281 ttatcaacca gatgggcttc ccgggctact tcctcatcgt tatggaattt atccagtggt
    41341 cgaaagataa cggcgtaccg gtagggccag gccgtggctc cggtgcgggt tcactggtgg
    41401 cctacgcgct gaaaatcacc gacctcgatc cgctggaatt tgacctgctg ttcgaacgtt
    41461 tccttaaccc ggaacgtgtc tccatgcctg acttcgacgt tgacttctgt atggagaaac
    41521 gcgatcaggt tatcgagcac gtagcggaca tgtacggtcg tgatgcggta tcgcagatca
    41581 tcaccttcgg tacaatggcg gcgaaagcgg tgatccgcga cgtaggccgc gtgctggggc
    41641 atccgtacgg ctttgtcgat cgtatctcga aactgatccc gcccgatccg gggatgacgc
    41701 tggcgaaagc gtttgaagcc gagccgcagc tgccggaaat ctacgaagcg gatgaagaag
    41761 ttaaggcgct gatcgacatg gcgcgcaaac tggaaggggt cacccgtaac gccggtaagc
    41821 acgccggtgg ggtggttatc gcgccgacca aaattaccga ttttgcgccg ctttactgcg
    41881 atgaagaggg caaacatccg gtcacccagt ttgataaaag cgacgttgaa tacgccggac
    41941 tggtgaagtt cgacttcctt ggtttgcgta cgctcaccat catcaactgg gcgctggaga
    42001 tgatcaacaa gcggcgggcg aagaatggcg agccgccgct ggatatcgcc gcgatcccgc
    42061 tggatgacaa gaaaagcttc gacatgctgc aacgctcgga aaccacggcg gtattccagc
    42121 ttgaatcgcg cggcatgaag gatctgatca agcgtctgca acctgactgc ttcgaagata
    42181 tgatcgcact ggtggcgctg ttccgcccag gtccgttgca atcagggatg gtggataact
    42241 ttatcgaccg taaacatggt cgcgaagaaa tctcctatcc ggacgtacag tggcagcatg
    42301 aaagcctgaa accggtactg gagccaacct acggcatcat cctgtatcag gaacaggtca
    42361 tgcagattgc gcaggtgctt tctggttata ccctcggtgg cgcggatatg ctgcgtcgtg
    42421 cgatgggtaa gaaaaagccg gaagagatgg ctaagcagcg ttctgtattt gctgaaggtg
    42481 cagaaaagaa cggagtcaac gccgaactgg cgatgaaaat cttcgacctg gtggagaaat
    42541 tcgcgggtta cggatttaac aaatcgcact ctgcggccta tgctttggtg tcatatcaaa
    42601 cgttatggct gaaagcgcac tatccggcgg agtttatggc ggcggtaatg accgccgata
    42661 tggacaacac cgagaaggtg gtgggcctgg tggatgagtg ctggcggatg gggctgaaaa
    42721 tcctgccacc agatataaac tccggtcttt accatttcca cgtcaacgac gacggcgaaa
    42781 tcgtgtatgg tattggcgcc atcaaagggg taggtgaagg tccgattgag gccatcatcg
    42841 aagcccgtaa taaaggcggc tacttccgcg aactgtttga tctctgcgcc cgtaccgaca
    42901 ccaaaaagtt aaaccggcgg gtgctggaaa aactgatcat gtccggggcg tttgaccgtc
    42961 ttgggccaca ccgcgcggcg ctgatgaact cgctgggtga tgcgttaaaa gcggcagatc
    43021 aacacgcgaa agcggaagct atcggtcagg ccgatatgtt cggcgtgctg gccgaagagc
    43081 cggaacaaat tgaacaatcc tacgccagct gccaaccgtg gccggagcag gtggtgttag
    43141 atggggaacg tgaaacgtta ggtctgtacc ttacgggaca ccctatcaac cagtatttaa
    43201 aagagattga gcgttatgtc ggaggcgtaa ggctgaaaga catgcacccg acagaacgtg
    43261 gtaaagtcat cacggctgcg gggctcgttg ttgccgcgcg ggttatggtc accaagcgcg
    43321 gcaatcgtat cggtatctgc acgctggatg accgttccgg gcggctggaa gtgatgttgt
    43381 ttactgacgc cctggataaa taccagcaat tgctggaaaa agaccgcata cttatcgtca
    43441 gcggacaggt cagctttgat gacttcagcg gtgggcttaa aatgaccgct cgcgaagtga
    43501 tggatattga cgaagcccgg gaaaaatatg ctagcgggct tgctatctcg ctgacggaca
    43561 ggcaaattga tgaccagctt ttaaaccgac tccgtcagtc tctggaaccc caccgctctg
    43621 ggacaattcc agtacatctc tactatcaga gggcggatgc acgcgcgcgg ttgcgttttg
    43681 gcgcgacgtg gcgtgtctct ccgagcgatc gtttattaaa cgatctccgt ggcctcattg
    43741 gttcggagca ggtggaactg gagtttgact aatacaggaa tactatgagt ctgaatttcc
    43801 ttgattttga acagccgatt gcagagctgg aagcgaaaat cgattctctg actgcggtta
    43861 gccgtcagga tgagaaactg gatattaaca tcgatgaaga agtgcatcgt ctgcgtgaaa
    43921 aaagcgtaga actgacacgt aaaatcttcg ccgatctcgg tgcatggcag attgcgcaac
    43981 tggcacgcca tccacagcgt ccttataccc tggattacgt tcgcctggca tttgatgaat
    44041 ttgacgaact ggctggcgac cgcgcgtatg cagacgataa agctatcgtc ggtggtatcg
    44101 cccgtcttga cggtcgtccg gtgatgatca ttggtcatca aaaaggtcgt gaaaccaaag
    44161 aaaaaattcg ccgtaacttt ggtatgccag cgccagaagg ttaccgcaaa gcactgcgtc
    44221 tgatgcaaat ggctgaacgc tttaagatgc ctatcatcac ctttatcgac accccggggg
    44281 cttatcctgg cgtgggcgca gaagagcgtg gtcagtctga agccattgca cgcaacctgc
    44341 gtgaaatgtc tcgcctcggc gtaccggtag tttgtacggt tatcggtgaa ggtggttctg
    44401 gcggtgcgct ggcgattggc gtgggcgata aagtgaatat gctgcaatac agcacctatt
    44461 ccgttatctc gccggaaggt tgtgcgtcca ttctgtggaa gagcgccgac aaagcgccgc
    44521 tggcggctga agcgatgggt atcatcgctc cgcgtctgaa agagctgaaa ctgatcgact
    44581 ccatcatccc ggaaccgctg ggcggcgctc accgtaaccc ggaagcgatg gcggcatcgt
    44641 tgaaagcgca actgctggcg gatctggccg atctcgatgt gttaagcact gaagatttaa
    44701 aaaatcgtcg ttatcagcgc ctgatgagct acggttacgc gtaattcgca aaagttctga
    44761 aaaagggtca cttcggtggc ccttttttat cgccacggtt tgagcaggct atgattaagg
    44821 aaggattttc caggaggaac acatgaacat cattgccatt atgggaccgc atggcgtctt
    44881 ttataaagat gagcccatca aagaactgga gtcggcgctg gtggcgcaag gctttcagat
    44941 tatctggcca caaaacagtg ttgatttgct gaaatttatc gaacataacc ctcgaatttg
    45001 cggcgtgatt tttgactggg atgagtacag tctcgattta tgcagcgata tcaatcaact
    45061 taatgaatat ctcccgcttt atgccttcat caacacccac tcgacgatgg atgtcagcgt
    45121 gcaggatatg cggatggcgc tctggttttt tgaatatgcg ctggggcagg cggaagatat
    45181 cgccattcgt atgcgtcagt acaccaacga atatcttgat aacattacgc cgccgttcac
    45241 gaaagccttg tttacctacg ttaaagagcg gaagtacacc ttttgtacgc cggggcatat
    45301 gggcggcacc gcatatcaaa aaagcccggt tggctgcctg ttttatgatt ttttcggcgg
    45361 gaataccctc aaggctgatg tctctatttc ggtcaccgag cttggttcgt tgctcgacca
    45421 caccgggcca cacctggaag cggaagagta catcgcgcgg acttttggcg cggaacagag
    45481 ttatatcgtt accaacggaa catcgacgtc gaacaaaatt gtgggtatgt acgccgcgcc
    45541 atccggcagt acgctgttga tcgaccgcaa ttgtcataaa tcgctggcgc atctgttgat
    45601 gatgaacgat gtagtgccag tctggctgaa accgacgcgt aatgcgttgg ggattcttgg
    45661 tgggatcccg caccgtgaat ttactcgcga cagcatcgaa gagaaagtcg ctgccaccac
    45721 gcaggcacaa tggccggttc atgcggtgat taccaactcc acctatgatg gcttgctcta
    45781 caacaccgac tggatcaaac agacgctgga tgtcccgtcg atccacttcg attccgcctg
    45841 ggtgccgtac acccattttc atccgatcta ccaggggaaa agtgatcttc gaaacgcaat
    45901 cgacccacaa aatgctggcg gcgttatcgc aggcttcgct gatccacatt aaaggcgagt
    45961 atgacgaaga ggcgtttaac gaagccttta tgatgcatac caccacctcg cccagttatc
    46021 ccattgttgc ttcggttgag acggcggcgg cgacgctgcg tggtaatccg ggcaaacggc
    46081 tgattaaccg ttcggtggag cgggcgctgc attttcgcaa agaggtccag cggttgcggg
    46141 aagagtctga cggttggttt ttcgatatct ggcaaccgcc gcaggtggat gaagccgaat
    46201 gctggcccgt tgcgccaggc gaacagtggc acggctttaa cgatgcggat gccgatcata
    46261 tgtttctcga tccggttaaa gtcactattt tgataccggg gatggacgaa cagggcaata
    46321 tgagcgagga ggggatcctg gcggcgctgg tggcaaaatt cctcgacgaa cgtgggatcg
    46381 tagtagagaa aaccggccct tataacctgc tgtttctctt tagtattggt atcgataaaa
    46441 ccaaagcaat gggattattg cgtgggttga cggaatttaa acgctcttac gatctcaacc
    46501 tgcggatcaa aaatatgcta cccgatctct atgctgaaga tcccgatttc taccgcaata
    46561 tgcgtattca ggatctggcg caagggatcc ataagctgat tcgtaaacac gatcttcccg
    46621 gtttgatgtt gtgggcattc gatactttgc cggaaattat catgacgcca catcaggcat
    46681 ggcagagaca gattaaaggt gaagtagaaa ccattgcgct ggaacaactg gtcggtagag
    46741 tatcggcaaa tatgatcctg ccttatccac cgggcgtacc gctgttgatg ccaggagaaa
    46801 tgctgaccaa agagagccgc acggtactcg attttctact gatgctttgt tccgtagggc
    46861 aacattaccc cggttttgaa acggatattc acggcgcgaa acaggacgaa gacggcgttt
    46921 accgcgtacg agtcctaaaa atggcgggat aacttgccag agcggcttac gggcgagtaa
    46981 cgtgctgtta acaaataaag gagacgttat gctgggttta aaacaggttc accatattgc
    47041 gattattgcg acggattatg cggtgagcaa agctttctac tgcgatattc ttggtttcac
    47101 gctgcaaagc gaagtctatc gcgaagcgcg cgactcgtgg aaaggggatt tggcgcttaa
    47161 tgggcaatat gtgattgagc ttttctcttt tccgttcccg ccggagcgcc ccagccgacc
    47221 ggaagcttgc ggcctgcgtc atctggcttt tagcgttgat gacatcgatg cggcagtggc
    47281 gcaccttgaa agccataacg tgaagtgtga agccatccgt gtcgatccat acacgcaaaa
    47341 aagcttcacc ttctttaacg atccggacgg gctgccgttg gaactgtatg agcagtaagg
    47401 cttgtcatcg ccgcatttgc ccggtaacgt gccgggcatt gctactgtaa aatcgcacca
    47461 tcatgacact cacgctcaat agacaacttc tcacctcacg ccagattttg gtcgccttta
    47521 gcggcgggct tgactccacc gttctgctgc atcagttggt gcagtggcgg acggaaaatc
    47581 cgggcgtcac tctgcgcgct attcatgtgc atcacggttt aagtgccaat gccgatgcct
    47641 gggttacgca ttgcgaaaac gtctgccaac agtggcaggt gccgctggtg gtcgaacgcg
    47701 tacaacttgc gcaagagggg ctggggattg aggcccaggc gcggcaggcg cgttatcagg
    47761 catttgcccg taccctattg cccggcgaag tgctggtcac cgcgcaacat ctcgacgatc
    47821 aatgtgaaac ctttctgctg gcgctaaaac gcggtagcgg ccctgccggg ctttcggcta
    47881 tggcggaagt ttcggagttt gccggaacac ggcttatccg cccgttgctt gcccgcacgc
    47941 ggggggaact ggcgcagtgg gcattggcgc atggtttacg ctggattgaa gacgaaagta
    48001 atcaggacga ctcatacgat cgtaactttc tgcgcctgcg cgtagtgccg ttattgcagc
    48061 agcgttggcc gcattttgcg gaagcaacgg cccgcagcgc cgcactttgt gctgaacaag
    48121 agagtctgtt ggatgaactg ctggcggatg atttagcaca ctgccaaacg tcgcagggga
    48181 cgctgcagat tgcgccaatg ctggcgatga gtgatgcccg ccgcgcggcg attatccgtc
    48241 gctggctggc agggcagaat gcaccaatgc cttcccgcga cgcgctggtg cggatctggc
    48301 aggaagtggc gctggcgcgg gaagatgcct ccccctgttt acgcttgggc gcgtttgaaa
    48361 tccgccgcta tcagtcgcaa ctgtggtgga ttaaatccgt caccgggcaa agtgaaacca
    48421 ttgtgccgtg gcagacgtgg ctacaaccgc tggaattacc ggcggggctg ggaagcgtac
    48481 agcttactgc gggaggcgat attcgccctc cgcgtgcaga cgaagcggtc agcgtgcgtt
    48541 tcaaatcggc aggattgctg catattgtcg ggcgcaacgg cggacgtaag ctgaagaaaa
    48601 tctggcaaga gttaggcgtg ccgccgtggc tacgtgacac cacgccactg ctgttttatg
    48661 gcgaaacgct gattgcggcg gcaggggtat ttgtgacgca agaaggtgtg gctgaaggtg
    48721 agaatggcgt aagttttgtc tggcagaaaa cgcttagtta agtgaaagcc ggataagacg
    48781 catcaaacgt cgcatccggc gaaagtcaat caggactcgc tcaccaccac cgtaccgatt
    48841 tccgggtggc taaagctggt aattttatcc agacgtagct cacgggtttc gccagcggcc
    48901 tcgacgacca gatactccac atttttgcgg gagactaaat cgctggcttt tgcctgcaat
    48961 ttttcgccat ctttcagctc aagtgtcagc attaaatgat gctggcaggc gagctcaaga
    49021 ttatcgtaat catcacaatt gattggttga tacgtatcat tcattaacat aatcgctcac
    49081 cagtaagttt gccgcagcgt atgctgcttt ttccctgaca gcctcagaaa gggcgtcgtc
    49141 ggcagccatt tcattcagca ctttcaaaac gcagcccagc gcgtccggaa cgtatcctaa
    49201 gtctccgctg gcgatttccg cgtaccgctt gcgtattaac tcacaatatt tttccacatg
    49261 ccctcctgtc agcacactga cttaaccgtg gatgcaagtc taagcctacg aagataaact
    49321 ctgtttcgca aggtgactat accacactca tttctgcaat atcagcgccg caactgcacg
    49381 tattccgtta caatggcctc ctgattcgaa aggagttttc ttatggcgct taaagcgaca
    49441 atttataaag cgacggttaa tgtggccgat ctcgaccgca accagtttct cgatgcctct
    49501 ctgacgctgg cgcgccaccc ttcagaaacc caggagcgta tgatgctgcg cctgctggcg
    49561 tggctgaaat atgctgatga acgtctgcaa tttacccgtg gtttgtgtgc cgatgatgag
    49621 ccggaagcgt ggctgcgtaa cgatcacctg ggcattgatt tgtggattga gctggggctg
    49681 ccggatgagc ggcggattaa gaaagcctgc acccaggccg cagaagtggc gctgtttacc
    49741 tataatagtc gggcggcgca aatctggtgg cagcaaaatc agagcaaatg tgtgcagttt
    49801 gccaatcttt ccgtctggta tctggacgat gaacaactgg cgaaagtaag cgcctttgcc
    49861 gatcgtacca tgacgctgca ggcaacgatt caggatggcg tgatctggtt atcggacgat
    49921 aagaataatc tggaagttaa cttaaccgcc tggcaacaac ctttatgatt gtgatttccc
    49981 gacatgttgc tattcccgat ggtgagcttg agatcaccgt cattcgtgcg cagggcgcgg
    50041 gcgggcagca tgttaataag acctcaacgg ccattcatct gcgttttgac attcgggcgt
    50101 ccagcctgcc agagtattac aaagagcgtc tgctcgccgc cagccatcat ttgatcagca
    50161 gtgatggcgt gattgtcatt aaggcacagg aataccgcag tcaggaactg aaccgcgaag
    50221 ccgcgctagc ccggctggtg gcagtgatta aagatttaac aacagaacaa aaagcccgac
    50281 gacccacgcg gcccacccgt gcatcgaaag agcgcaggct ggcatcgaaa gcacaaaaat
    50341 caagcgcgaa ggcgatgcgc ggcaaagtac gcagcggtcg ggaataaaaa gaaggaatag
    50401 atggtgaaaa aagcgatagt gacagcgatg gctgtaatca gcctctttac tctgatggga
    50461 tgtaataacc gggccgaagt cgatacgctt tctccagcac aggctgccga actgaaaccg
    50521 atgccgcaaa gttggcgcgg cgtgctgccg tgtgctgatt gtgaaggaat cgaaacctct
    50581 ctgttcctcg aaaaagacgg aacatgggtg atgaatgagc gttatctcgg tgctcgtgaa
    50641 gaaccttcct ccttcgcttc ctacggtaca tgggcgcgaa ccgctgacaa gctggtatta
    50701 accgacagca aaggtgaaaa gtcatattat cgggcgaaag gcgatgcgct ggagatgctc
    50761 gatcgtgaag gcaatccgat tgaatcgcag ttcaactata cgctggaacc ggcacaatcc
    50821 agtttaccta tgacgccgat gaccctgcga ggcatgtatt tttatatggc tgatgcggcg
    50881 accttcactg attgcgcgac cggaaaacgt ttcatggtag cgaataacgc agagctggag
    50941 cgtggctacc tggctgcgcg cggtcacagt gaaaaaccgg tgttactgtc agtagaaggt
    51001 cactttacgc ttgaggctaa tccggatact ggtgcgccaa ccaaagtatt agcgcccgat
    51061 acggcgggta aattttaccc gaataaggat tgcagtagtt tggggcagta aacctgctta
    51121 aggcagaaac aaacgcaaaa caggccagaa ggatatattt caacattttg aatttgcacg
    51181 ttttttgtag gccggataag gcgtttacgc cgcatccggc aatggtgctc aacgcctgat
    51241 gcgacgctgg cgcgtcttat catgcctaca acccccctca taccttaagg cggataaggc
    51301 atttacttta tcaccgggtc aaaccaacaa agcgacccgc cttgatataa atccctggct
    51361 tcaggtgccc aacatactgt aactgcgttt ctggcttaaa cgcagagaca tcaccaatac
    51421 gcatatgcat cagatcggca gggctaatcc agcccgattg cgccagtgta agtggatgtc
    51481 cggctttggc aaatgcatca gtgacaaatt ccgaacaaaa ccacgacttt ttgtctcctt
    51541 cgcccacact gcttaactgc gctttcgcca ggccgctgac gcactgctgg cgaaaatcct
    51601 cggagaactg attcagtgag cacatctggc gagtcaccat aaagggaata aattcgacaa
    51661 tgccgcgata gttataaccg ctatctttga ttttattggc aaacgcggtg atatctgtgg
    51721 cttgttgcgg ggtaagatcc gggactcgta agacgaaaag cttatcacta tgcttcatcg
    51781 cttttttaag ggaaacaatc tggacgccag cgcctgtcgc ttctgcaacg ttattatcac
    51841 ccagaaagat tgcaacgtga ctcacagagg aagtgctgaa gacgcggatt ccaaatgagg
    51901 ttaccccaag gcttgaggag aacagcaaat cgccgggttt gagatcaggt gccgttattt
    51961 cttttattga ttgttcggtg aaagagcttt gatgctggaa tttgacagcc catgtttttg
    52021 cctcggcatc tactgctgtg gctgatgggg ctggctgata tcaacggtac aagccgaaag
    52081 taaaagaaag ctggggagaa gcaggcggca gtacgccttt ggtttatcca ttttatacaa
    52141 tccatgtaaa aaagggccct gaaattcagg accctttctg gcatcagcct ttaatctgtt
    52201 tcaccagata ttcgacgatg tcaccagtct taattaactg tttctcgccg ttgcgacgat
    52261 atttatattc gatatcgtcg ttgtcgaggt tacggtcgcc cagcacaata gtgtgcggaa
    52321 taccgatcag ttccatatca gcaaacatca cgcccggacg ctctttgcgg tcatccagca
    52381 gcacttcgat accttgtgca cgcagttcgc tgtacagttt ctcagcaagc tcttgtacgc
    52441 ggaaggattt gtgcatgttc atcggcagaa tcgccacctg gaacggcgcg atagcgtcag
    52501 gccatacgat gccgcgttcg tcgtagttct gctcaatcgc cgcagctacc acacgcgtta
    52561 ccccgatacc gtagcaaccc atcgtcagga tttggttacg gccatcttca ccctgtacgg
    52621 aggctttcag tgcttcggag tacttggtac ccagctggaa gatgtgacca acttcgatac
    52681 cacgtttgat cagcagcgta ccctggccat ccgggcttgg atcgccagcc accacgttac
    52741 ggatatctgc aacttccggg gtagcgacat cgcgatccca gttgataccg aagtagtgtt
    52801 taccatcgat gttagcacca gcagcgaaat cactcatcgc cgcaacggta cggtcaatca
    52861 ccaccggaat cggcatgttt accggaccca gtgaacccgg accggcttta accacagcac
    52921 gaatttcttc ttcggtcgcg aaagtcagcg ggcttgcaac ctgcggcagt ttttctgctt
    52981 taacttcgtt cagctcgtga tcaccgcgca ccagcagcgc aaccagcggg aagctgctgc
    53041 cttcaaccgc tttaaccagc agagtcttaa ccgttttctc aatcggcaga ttgaactgtt
    53101 caaccagttc cgcgatggtt ttcgcgttcg gcgtatcaac cagcgtcatt tcctgggtag
    53161 cagcagcgcg cggttctttc ggcgcgatag cttctgccag ttcaatgttc gctgcatagt
    53221 cagaggtgtc ggagaagacc acatcgtctt caccgctctg cgccagcacc tggaattcgt
    53281 gagaggcgct gccgccgata gaaccggtgt cggcttgcac ggcgcggaaa tccagcccca
    53341 tgcggctgaa gattttgctg taggccgcat acattgcatc gtaggtttcc tgcagggatt
    53401 cctgagaagt atggaaagag taagcatctt tcatcaggaa ttcgcgggaa cgcatgacgc
    53461 cgaaacgcgg acgcacttcg tcgcggaact tggtctggat ctgatagaag ttcagcggca
    53521 gctgtttgta agagctaagc tcgttacgaa tcaggtcagt gataacttct tcatgagttg
    53581 ggccgagtac gaacggacgc tcgccacggt caacaaaacg cagcagttcc ggaccgtact
    53641 gttcccaacg accactctct tgccacaaat cggctggctg aaccaccggc atcgacacct
    53701 cgattgcacc ggcgttgttc atctcttcac gcacgatgtt ttcgactttt ttcagaacgc
    53761 gcacgccggt cggcagccag gtatataacc cggaggccag cttgcggatc atcccggcgc
    53821 gcagcatcag ctgatggctg atcacctcgg cgtcggcagg tgtctccttg agagtggaga
    53881 gcaggtattg gctagtacgc atgttgttac ggttccagtt ggaaggtaga acaggctcaa
    53941 ggcgagcctg ggacaaaaaa agtgatttag tttaccagtg caaaagaaat gtcaaaagag
    54001 aagggcgtga atttaacgcg gttccagcgc aaagacttca aaacctgcgt cggtgacgcg
    54061 ccagcgaacg ttaaaatcat gtagccagac ggcataggtt ttgcccgttt cctcaccttt
    54121 atgataggcc gggcgcgggt cctgcgccag tacttcgcgg ataaacagcg ttaactgcgg
    54181 ataacgcttc tccagcgtca aaagctgctt ttcgacctct gcggtaaaac tcaccgccat
    54241 ctctgcagct ggcgcacttt gcgcatagct ggcactggca tcgggaagcg attcggcaaa
    54301 ggggagatac ggtttgatat ccactaccgg cgtaccatcg accagatcca gactgccgag
    54361 cttcagaatc acgctgtctt tatggcaaac aacctctttc agctctacca gcgacatacc
    54421 aattgggtta gggcggaaag tagagcgtgt tgcgaaaacc cccattctgg cgttaccgcc
    54481 gaggcgcggt ggacgcacag tcggacgcca gccgccttcc atcgtttgat gaaagacgaa
    54541 aaggatccat aaatggctga acgcttccag gccgcgaacg gcgtcggcct ggttgtaggg
    54601 agcaatgaga tgcagttcgc cgttggcgct ttttaccaga cctggctggc gcggaacggc
    54661 gaatttttct ttatagggcg agcgaataac gcctatttgc tcgaactgga aactgctcat
    54721 ttcgccgtaa tgttaagcgc agagccgata catacagcct gacgatagca gcctggcgta
    54781 ccgctggtga cttcgcagct atgcagtaat accgcattgg ctttcatttt agaggcgttg
    54841 atttgcatcc gcttacgcgc ggttggaatg ctcggcggag agtcctgatt agaggcctgg
    54901 caagagtcgc cactgacttc accgagatcg cggaacggtt tgccgactaa ttcttctgca
    54961 ttggtataaa ttcggaccgg cgtggcgcgc ggcgctttcg gttttgcagg ctccgctttc
    55021 ggctggggtg cagtgctttg aacgggttcg acaggggatc tgcttaacat ggaacagccg
    55081 cttagcatga gtgctactaa acagatcggt aaagcacgca tagtatttcc tcaatgtatg
    55141 atcaaaacgt caatattgaa tcaggagctt gtaaaaatga caagacgggc aagtgcccat
    55201 cctgaatgat attacaaatt gtggaaacag cctaaaaatt accagccttt aacagcgccg
    55261 ccgttaaaca ctttgtttgc tgcttcgtaa acttcatcag actgataagc ctggacgaat
    55321 ttcttcacgt tctcggcgtc tttgttatct tcacgcgtta cgatcaggtt tacgtacggg
    55381 gagtctttat cttcgacaaa gataccgtct ttcgctggag tcaggccaat ctggctggca
    55441 taggtggtat tgataactgc cagagcgatt tgtgcgtcgt ccagagatcg aggcagctgc
    55501 ggtgcttcca gctcaacaat tttcagattt tttgggttct caacaacatc aagtacggtc
    55561 ggcagcaggc caacgccatc tttcagtttg atcaagccca ctttttgcag cagcagcagt
    55621 gaacgaccaa ggttagttgg atcgtttggc acggcaacct gcgaaccatc ctgcagttca
    55681 tccagtgatt tgattttctt ggagtaacca gcaatcggat aaacaaaagt gttgcctact
    55741 gcgaccagtt tgtagccacg atctttcagt tgctgatcaa ggtacggttt atgctggaag
    55801 gcgttggcgt cgatatcgcc tttgctcaat gcttcgtttg gcagaacata gtcgttgaag
    55861 gttaccagct caacgtccag gccatatttg tctttcgcaa ctttctgcgc gacttctgca
    55921 acctgctgtt cggcaccaac aatcacgccg actttaatgt ggtttggatc tttttcatcc
    55981 tgaccgcagc ctaccagtgc cagtgatcca atcagggctc ccactgccgc aaaggttttg
    56041 aatttgaacg ccatacctta ttccttcttc aattatttat gttgtgttga acgttacttg
    56101 cgagtgacag cccggacgat gcggtcgcct gcgaactgaa ttaaataaac cagaatgacc
    56161 agcaatacca gtaccgtatt catcaccgtc gcgttatagc cgatgtagcc atactgatag
    56221 ccaatctgac ctaaaccacc ggcaccgaca gcaccaccca tcgcggaata accgactagg
    56281 gtaatcaggg tgatagttgc cgcattcacc agacccggca atgcttccgg taacagcact
    56341 ttacggacga tctgcatcgg cgtggcaccc attgcacggg aagcttcaat taacccggtt
    56401 gggatctcca gcagagcgtt ctcgaccata cgggcaataa acggtgctgc accaacggtt
    56461 aacggaacaa tcgctgcctg caaaccaatc gatgtaccaa caataacgcg ggtaaacgga
    56521 atcatccata ccagcaagat aatgaacggg atagaacgga aaatgttcac aatcgcagaa
    56581 acggtacgat acagcttcgc gttagcaata atttgccccg gacgcgtgac ataaagcaga
    56641 acgccaaccg gcagaccaat cacaaagcca aaaaaaccgg atacgaaggt cattgccagc
    56701 gtttcccata cgccacgaac cagcagccac atcatcggct cagacataac ccagtacctc
    56761 tacttttaca tggtgttcct gcagccaggc aatggcggct tgcgtatctt gttgtgtgcc
    56821 gtgcatttca gtcagcatga tgccgaactt aacgccaccg gcgtagtcca tctgcgcgct
    56881 aataatgttg ttgttgacgt tgaaacgacg cgcggtttca gaaagcagtg gggcatcgac
    56941 cgattgaccg gtaaactcca gacgcagcat cggcacgcag tcagtaaatg gctccgcttg
    57001 cagacgttcc tggtaatctt ccgggatatc cagatgcagg gtcgactgaa taaacttctg
    57061 cgccagcggc gttttcggat gcgagaacac ttcacttacc gtgtcctgct cgatcagttc
    57121 gccattgctg atgaccgcca cgcaatcaca aatacgcttc acaacgtcca tttcgtgggt
    57181 gatcaacaga atcgtcaaac ccagacggcg gttaatgtct ttcagcagtt cgagaataga
    57241 acgtgtcgtt gccgggtcca gcgcgctggt ggcttcatca cacagcaata ctttgggatt
    57301 gctggctaat gcacgggcaa tcgccacacg ttgtttctgc ccaccggaaa gattcgacgg
    57361 gtagctatca tgcttatcgc caagaccaac caatgacagc aattccgtca cgcgacgttt
    57421 gatctcgtct ttcggtgtgt tgtccagctc cagcggcaga gccacgttgc caaaaacagt
    57481 acgcgaagag agcaggttaa aatgctggaa aatcatacca atctggcggc gagctttggt
    57541 caactcggat tctgacagcg tggtcagttc ctggccatcg accagcacgc taccctcggt
    57601 tgggcgctcc agcaggttta cacaacgtat aagcgtactc ttacccgcgc ctgaggcacc
    57661 gataacgcca taaatttgtc cagctggcac atgcaggctg acgttgttca acgcctggat
    57721 ggtgcgggtg ccctggtgga acactttggt gatattcgaa agttttatca ttgattattt
    57781 attatcgtca ttaagttagt cgtggcatct cgaatgcctg aaacgggcaa cgccgtcaat
    57841 gaaatggatg ttaaggcatc cagacgtcta aatcaatcag gtttatgcga agagcacttt
    57901 cttgcaggtc gaaacatgcg atactagcgt cacatgcctt attaaggagc tataaaaggt
    57961 ggcaaagagc gtacccgcaa tttttcttga ccgtgatggc accattaatg tcgatcacgg
    58021 ctatgtccat gagatcgaca actttgaatt tatcgacggt gttattgacg ccatgcgcga
    58081 gctaaaaaaa atgggctttg tgctggtggt agtaaccaac cagtctggca ttgctcgcgg
    58141 taaatttacc gaagcacagt ttgaaacgct gaccgagtgg atggactggt cgctggcgga
    58201 ccgagatgtc gatctggatg gtatctatta ttgcccgcat catccgcagg gtagtgttga
    58261 agagtttcgc caggtctgcg actgccgtaa accacatccg gggatgcttt tgtcagcacg
    58321 cgattatttg catattgata tggccgcttc ttatatggtg ggcgataaat tagaagatat
    58381 gcaggcagcg gctgcggcga acgtgggaac aaaagtgctg gtgcgtacgg gtaaacctat
    58441 tacgcctgaa gcagaaaacg cggcggattg ggtgttaaat agcctggcag acctgccgca
    58501 agcgataaaa aagcagcaaa aaccggcata atgattaaaa gatgagcgat tgaaataaaa
    58561 atgcattttt ccacttgtct tcctgagacg actccctata atgcgcctcc atcgacacgg
    58621 cggatgtgaa tcacttcaca caaacagccg gttcgg
//
LOCUS       DADKRT010000005        47223 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.005, whole genome shotgun sequence.
ACCESSION   DADKRT010000005 DADKRT010000000
VERSION     DADKRT010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 47223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47223
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.005"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            27..764
                     /locus_tag="JQ356_000269"
     CDS             27..764
                     /locus_tag="JQ356_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY4620467.1"
                     /translation="MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELRAGVVVGGTRF
                     IFPADRESISILLTNTSQESWLINSKINRPTRWAGGKASTVPAPLLAAPPLILLKPGT
                     TGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG
                     DPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQ
                     AIAPFHVAWRAINDYDGLSAKKEQNLP"
     gene            875..1885
                     /gene="pyrD"
                     /locus_tag="JQ356_000270"
     CDS             875..1885
                     /gene="pyrD"
                     /locus_tag="JQ356_000270"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HAY4620468.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
                     KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
                     KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
                     APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
                     EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            2059..2601
                     /gene="zapC"
                     /locus_tag="JQ356_000271"
     CDS             2059..2601
                     /gene="zapC"
                     /locus_tag="JQ356_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HAY4620469.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF
                     SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNVLVAIRYLKPQMPKSWHFVSHG
                     EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
                     MNDRLKPQVNVDSFSLEQAV"
     gene            complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="JQ356_000272"
     CDS             complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="JQ356_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein YcbX"
                     /protein_id="HAY4620470.1"
                     /translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
                     FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
                     PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
                     RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
                     KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
                     ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
                     ILEGEVSPLKKSAMGDDGTILCCSCVPKTALKLAR"
     gene            3951..6059
                     /gene="rlmKL"
                     /locus_tag="JQ356_000273"
     CDS             3951..6059
                     /gene="rlmKL"
                     /locus_tag="JQ356_000273"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HAY4620471.1"
                     /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV
                     YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
                     LRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL
                     HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
                     LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
                     NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
                     EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYSDWVVVQEYAPPKTI
                     DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA
                     HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGALSTTT
                     VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
                     MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
                     LSQDFARNRQIHNCWLITAA"
     gene            6071..7978
                     /locus_tag="JQ356_000274"
     CDS             6071..7978
                     /locus_tag="JQ356_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY4620472.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
                     DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQL
                     VKDFSAQVLRGDKIVLIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPDKTVMDNIAEGKQEVMVNGKPRHVLSYLQDFLFHPKRAMTPVRALSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL
                     QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPYEQTQKVLADMAAAEQELEQAFER
                     WEYLEALKNGG"
     gene            8108..9361
                     /gene="pqiA"
                     /locus_tag="JQ356_000275"
     CDS             8108..9361
                     /gene="pqiA"
                     /locus_tag="JQ356_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HAY4620473.1"
                     /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF
                     FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
                     KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
                     QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM
                     VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDRQPESEHEES"
     gene            9366..11006
                     /gene="pqiB"
                     /locus_tag="JQ356_000276"
     CDS             9366..11006
                     /gene="pqiB"
                     /locus_tag="JQ356_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706874.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HAY4620474.1"
                     /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
                     VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
                     VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
                     IPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
                     PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT
                     MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            11003..11566
                     /gene="pqiC"
                     /locus_tag="JQ356_000277"
     CDS             11003..11566
                     /gene="pqiC"
                     /locus_tag="JQ356_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HAY4620475.1"
                     /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR
                     LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
                     VVASQPLGSVQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
                     YDEMVKVLAGVWSQEAASIAQEIKRLP"
     gene            11822..11989
                     /gene="rmf"
                     /locus_tag="JQ356_000278"
     CDS             11822..11989
                     /gene="rmf"
                     /locus_tag="JQ356_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HAY4620476.1"
                     /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW
                     REAMADRVVMA"
     gene            complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="JQ356_000279"
     CDS             complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="JQ356_000279"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HAY4620477.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
                     LKVGLFQDTSAF"
     gene            complement(12646..14406)
                     /locus_tag="JQ356_000280"
     CDS             complement(12646..14406)
                     /locus_tag="JQ356_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HAY4620478.1"
                     /translation="MTITKLAWRDLVPDTDSYQEIFAQPNLIDENDPLFSDTQPRLQF
                     ALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLR
                     HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
                     LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPELSEQAIYSEFEDTLQIVDAESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAA
                     RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
                     ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
                     HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
                     QEGRHRFPWPLRWLNWFIPN"
     gene            14592..15044
                     /gene="matP"
                     /locus_tag="JQ356_000281"
     CDS             14592..15044
                     /gene="matP"
                     /locus_tag="JQ356_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HAY4620479.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
                     LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKLDLQALLGKE"
     gene            complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="JQ356_000282"
     CDS             complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="JQ356_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HAY4620480.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
                     INNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA
                     KLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRL
                     EYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLK
                     SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER
                     RAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV
                     KGIKDVVTQPQA"
     gene            complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="JQ356_000283"
     CDS             complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="JQ356_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HAY4620481.1"
                     /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
                     MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES
                     MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG
                     LKIHSNLYH"
     gene            17245..17874
                     /gene="sxy"
                     /locus_tag="JQ356_000284"
     CDS             17245..17874
                     /gene="sxy"
                     /locus_tag="JQ356_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
                     /protein_id="HAY4620482.1"
                     /translation="MKSLSYKRIYKSQEYLAMLGTIEYRSLFGSYSLTVDDTVFAMVS
                     DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS
                     LDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
                     SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE"
     gene            complement(17837..19999)
                     /gene="yccS"
                     /locus_tag="JQ356_000285"
     CDS             complement(17837..19999)
                     /gene="yccS"
                     /locus_tag="JQ356_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HAY4620483.1"
                     /translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
                     IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
                     SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIG
                     HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGLLMATLN
                     QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
                     FQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTL
                     GFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESA
                     LFRHAVRMSLVLCFGYAIIQITGMHHGFWILLTSLFVCQPNYNATRHRLKLRIIGTLV
                     GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
                     FEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQ
                     GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYIS
                     ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRAD
                     SKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA"
     gene            complement(20009..20455)
                     /locus_tag="JQ356_000286"
     CDS             complement(20009..20455)
                     /locus_tag="JQ356_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HAY4620484.1"
                     /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
                     ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE"
     gene            20578..22638
                     /gene="helD"
                     /locus_tag="JQ356_000287"
     CDS             20578..22638
                     /gene="helD"
                     /locus_tag="JQ356_000287"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HAY4620485.1"
                     /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
                     LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPLPVNRLEEFDNCREAWRK
                     CQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLA
                     GAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITART
                     FHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEE
                     MQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASVPEEIRDLFSKRIK
                     LMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA
                     LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNS
                     RIGKVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERIL
                     ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAAR
                     ESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPV
                     ARKP"
     gene            complement(22670..23128)
                     /gene="mgsA"
                     /locus_tag="JQ356_000288"
     CDS             complement(22670..23128)
                     /gene="mgsA"
                     /locus_tag="JQ356_000288"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HAY4620486.1"
                     /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA
                     TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
     gene            complement(23224..23886)
                     /locus_tag="JQ356_000289"
     CDS             complement(23224..23886)
                     /locus_tag="JQ356_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HAY4620487.1"
                     /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
                     RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
                     NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
                     PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
                     SS"
     gene            24059..24472
                     /locus_tag="JQ356_000290"
     CDS             24059..24472
                     /locus_tag="JQ356_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HAY4620488.1"
                     /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI
                     PVSPKVAGKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL
                     GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
     gene            complement(24517..24834)
                     /gene="hspQ"
                     /locus_tag="JQ356_000291"
     CDS             complement(24517..24834)
                     /gene="hspQ"
                     /locus_tag="JQ356_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HAY4620489.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND
                     ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR
                     LRN"
     gene            complement(24892..26082)
                     /gene="rlmI"
                     /locus_tag="JQ356_000292"
     CDS             complement(24892..26082)
                     /gene="rlmI"
                     /locus_tag="JQ356_000292"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HAY4620490.1"
                     /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD
                     HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
                     RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALVSALQTLYPECAIYDRSDVA
                     VRKKEGMELTLGLVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY
                     VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
                     RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
                     LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
                     CRVM"
     gene            26177..26455
                     /gene="yccX"
                     /locus_tag="JQ356_000293"
     CDS             26177..26455
                     /gene="yccX"
                     /locus_tag="JQ356_000293"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HAY4620491.1"
                     /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
                     EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR"
     gene            complement(26452..26781)
                     /gene="tusE"
                     /locus_tag="JQ356_000294"
     CDS             complement(26452..26781)
                     /gene="tusE"
                     /locus_tag="JQ356_000294"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HAY4620492.1"
                     /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW
                     EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(26872..27531)
                     /gene="yccA"
                     /locus_tag="JQ356_000295"
     CDS             complement(26872..27531)
                     /gene="yccA"
                     /locus_tag="JQ356_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HAY4620493.1"
                     /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
                     GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILFETSNIVHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            complement(27738..27825)
                     /locus_tag="JQ356_000296"
     tRNA            complement(27738..27825)
                     /locus_tag="JQ356_000296"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(27789..27791),aa:Ser,seq:tga)
     gene            28252..29370
                     /gene="hyaA"
                     /locus_tag="JQ356_000297"
     CDS             28252..29370
                     /gene="hyaA"
                     /locus_tag="JQ356_000297"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 small subunit"
                     /protein_id="HAY4620494.1"
                     /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
                     ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE
                     EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
                     ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
                     RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
                     STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
                     VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA"
     gene            29367..31160
                     /gene="hyaB"
                     /locus_tag="JQ356_000298"
     CDS             29367..31160
                     /gene="hyaB"
                     /locus_tag="JQ356_000298"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
                     /protein_id="HAY4620495.1"
                     /translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT
                     NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN
                     ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP
                     GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK
                     IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI
                     PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNV
                     LPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ
                     ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG
                     RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP
                     RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI
                     LRTLHSFDPCLACSTHVLGDDGSELISVQVR"
     gene            31179..31886
                     /gene="hyaC"
                     /locus_tag="JQ356_000299"
     CDS             31179..31886
                     /gene="hyaC"
                     /locus_tag="JQ356_000299"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HAY4620496.1"
                     /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
                     SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
                     QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
                     APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDGTVISTMV
                     NGYRSHKFGKISNKECS"
     gene            31883..32470
                     /locus_tag="JQ356_000300"
     CDS             31883..32470
                     /locus_tag="JQ356_000300"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HAY4620497.1"
                     /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
                     GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLLAAEQSALAQLAAWGSVP
                     QLANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
     gene            32467..32865
                     /gene="hyaE"
                     /locus_tag="JQ356_000301"
     CDS             32467..32865
                     /gene="hyaE"
                     /locus_tag="JQ356_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HAY4620498.1"
                     /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
                     PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGN
                     YRGVLNGIHPWAELINLMRGLVEPQQERAS"
     gene            32862..33719
                     /locus_tag="JQ356_000302"
     CDS             32862..33719
                     /locus_tag="JQ356_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HAY4620499.1"
                     /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA
                     HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
                     DDSKSEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
                     IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG
                     YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC
                     QWLAEAAPT"
     gene            33853..35397
                     /gene="appC"
                     /locus_tag="JQ356_000303"
     CDS             33853..35397
                     /gene="appC"
                     /locus_tag="JQ356_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HAY4620500.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
                     KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWAFYSNYVGDIFGAPLAMEALM
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
                     IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALR
                     SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
                     QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
                     NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
                     MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
                     PTQQQG"
     gene            35409..36545
                     /gene="appB"
                     /locus_tag="JQ356_000304"
     CDS             35409..36545
                     /gene="appB"
                     /locus_tag="JQ356_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY4620501.1"
                     /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
                     ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
                     AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
                     FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLSSQLATKRAALLVMLCFLLA
                     GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
                     LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL
                     TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY"
     gene            36558..36650
                     /gene="cbdX"
                     /locus_tag="JQ356_000305"
     CDS             36558..36650
                     /gene="cbdX"
                     /locus_tag="JQ356_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HAY4620502.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS"
     gene            36730..38028
                     /locus_tag="JQ356_000306"
     CDS             36730..38028
                     /locus_tag="JQ356_000306"
                     /EC_number="3.1.3.2"
                     /EC_number="3.1.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AppA family phytase/histidine-type acid
                     phosphatase"
                     /protein_id="HAY4620503.1"
                     /translation="MKAILIPFLSLLIPLTSQSAFAQSEPELKLESVVIVSRHGVRAP
                     TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYFGHYQRQRLVADGLLAKKGCPQP
                     GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNV
                     NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS
                     ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
                     YLLQRTPEVARSRATPLLDLIMAALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
                     ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
                     PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
     gene            complement(38143..40323)
                     /gene="etk"
                     /locus_tag="JQ356_000307"
     CDS             complement(38143..40323)
                     /gene="etk"
                     /locus_tag="JQ356_000307"
                     /EC_number="2.7.10.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HAY4620504.1"
                     /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI
                     AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK
                     TIAELNLHDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN
                     GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF
                     TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL
                     PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY
                     KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR
                     QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR
                     RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA
                     DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI
                     DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL
                     LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS
                     LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE"
     gene            complement(40343..40789)
                     /gene="etp"
                     /locus_tag="JQ356_000308"
                     /gene_synonym="yccY"
     CDS             complement(40343..40789)
                     /gene="etp"
                     /locus_tag="JQ356_000308"
                     /gene_synonym="yccY"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase Etp"
                     /protein_id="HAY4620505.1"
                     /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL
                     VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR
                     GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR"
     gene            complement(40777..41916)
                     /locus_tag="JQ356_000309"
     CDS             complement(40777..41916)
                     /locus_tag="JQ356_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY4620506.1"
                     /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQY
                     DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
                     LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
                     VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
                     GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
                     TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
                     EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
     gene            complement(41962..44058)
                     /locus_tag="JQ356_000310"
     CDS             complement(41962..44058)
                     /locus_tag="JQ356_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY4620507.1"
                     /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
                     MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
                     QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
                     WGYAGNAGNITNPFCRVNDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
                     RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
                     FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMS
                     GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
                     TAPGQSEQLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
                     MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
                     NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYVKQRDWD
                     NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG
                     VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
                     YQLYPMTAEREVPVGQ"
     gene            complement(44058..44804)
                     /locus_tag="JQ356_000311"
     CDS             complement(44058..44804)
                     /locus_tag="JQ356_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HAY4620508.1"
                     /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPMEN
                     VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS
                     VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
                     QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL
                     WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
     gene            complement(44801..45445)
                     /gene="gfcB"
                     /locus_tag="JQ356_000312"
     CDS             complement(44801..45445)
                     /gene="gfcB"
                     /locus_tag="JQ356_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein GfcB"
                     /protein_id="HAY4620509.1"
                     /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI
                     QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
                     EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV
                     LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP"
     gene            complement(45552..45857)
                     /locus_tag="JQ356_000313"
     CDS             complement(45552..45857)
                     /locus_tag="JQ356_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-rich inner membrane protein GfcA"
                     /protein_id="HAY4620510.1"
                     /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG
                     ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR"
     gene            complement(46299..46511)
                     /gene="cspH"
                     /locus_tag="JQ356_000314"
     CDS             complement(46299..46511)
                     /gene="cspH"
                     /locus_tag="JQ356_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspH"
                     /protein_id="HAY4620511.1"
                     /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
                     LIPGLRVEFCRVNGLRGPTAANVYLS"
     gene            46797..47009
                     /gene="cspG"
                     /locus_tag="JQ356_000315"
     CDS             46797..47009
                     /gene="cspG"
                     /locus_tag="JQ356_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspG"
                     /protein_id="HAY4620512.1"
                     /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT
                     LNENQKVEFSIEQGQRGPAAANVVTL"
     gene            47020..47208
                     /locus_tag="JQ356_000316"
     CDS             47020..47208
                     /locus_tag="JQ356_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY4620513.1"
                     /translation="MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITF
                     DNVTLQIRTDHAPLDFTK"
BASE COUNT        11628 a        11729 c        12408 g        11458 t
ORIGIN      
        1 tagcgatgtg cagtcgggta aagtgaatgc cagcgcgaca tttgtacttc attatgacta
       61 atacgtggaa cagattggcg ctcttgattt tcgccgtttt atcgctgctg gtggcgggtg
      121 aattgcgggc aggagtggtg gtcggcggaa cgcgatttat ctttccggca gacagagaat
      181 cgatatctat tttactgact aataccagtc aggaatcctg gctgattaac agtaaaatca
      241 accgcccaac gcgttgggcc ggggggaaag cgtcgacagt gccagcacca ttactggccg
      301 ctccgccact tattctcctg aagcccggta ctacaggcac gttgcgcttg ctgagaacgg
      361 aaagcgacat cttgcctgtg gatcgcgaaa cgctatttga gttaagcatt gccagcgtgc
      421 catccggcaa agttgaaaat cagagcgtaa aagtggcgat gcgctcggta tttaaactgt
      481 tctggcgacc cgaaggtttg ccgggcgacc cgctggaagc ttatcaacaa ttacgctgga
      541 cacggaattc gcagggtgta caactcacta acccaacgcc ttactacatt aacctgattc
      601 aggtgagcgt aaatggtaaa gcgttaagta atgcgggagt tgtgccgcct aaaagccagc
      661 gtcagacaag ctggtgtcag gcaatcgcac cgtttcatgt cgcctggcgg gcgataaatg
      721 attacgacgg gttgagtgca aagaaggagc aaaatctgcc ctgaaacagg ttcggaaaac
      781 gtttgcgttt tttttgccgc aggtcaattc ccttttggtc cgaactcgca cataatacgc
      841 ccccggtttg cacaccggga atccaggaga gttcatgtac taccccttcg ttcgtaaagc
      901 ccttttccag ctcgatccag agcgcgctca tgagtttact tttcagcaat tacgccgtat
      961 tacaggaacg ccgtttgaag cactggtgcg gcagaaagtg cctgcgaaac ctgttaactg
     1021 catgggcctg acgtttaaaa atccgcttgg tctggcagcc ggtcttgata aagacgggga
     1081 gtgcattgac gcgttaggcg cgatgggatt tggatcgatc gagatcggta ccgtcacgcc
     1141 acgtccacag ccaggtaatg acaagccgcg tctctttcgt ctggtagatg ccgaaggttt
     1201 gatcaaccgt atgggcttta ataatcttgg cgttgataac ctcgtagaga acgtaaaaaa
     1261 ggcccattat gatggcgtcc tgggtattaa catcggcaaa aataaagata cgccagtgga
     1321 gcagggcaaa gatgactatc tgatttgtat ggaaaaaatc tatgcctatg cgggatatat
     1381 cgccatcaat atttcatcgc cgaatacccc aggattacgc acgctgcaat atggtgaagc
     1441 gctggatgat ctcttaaccg cgattaaaaa taagcaaaat gatttgcaag cgatgcacca
     1501 taaatatgtg ccgatcgcag tgaagatcgc gccggatctt tctgaagaag aattgatcca
     1561 ggttgccgat agtttagttc gccataatat tgatggcgtt attgcaacca ataccacact
     1621 cgatcgttct cttgttcagg gaatgaaaaa ttgcgatcaa accggtggct taagtggtcg
     1681 tccgcttcag ttaaaaagca ccgaaattat tcgccgcttg tcactggaat taaacggtcg
     1741 cttaccgatc atcggtgttg gcggcatcga ctcggttatc gctgcgcgtg aaaagattgc
     1801 tgcgggtgcc tcactggtgc aaatttattc tggttttatt tttaaaggtc cgccgctgat
     1861 taaagaaatc gttacccata tctaattatt tcttcgaatt cctctttata agataatcag
     1921 ggctttattt tcagccctgg ttgttttata ttcatcgctg ttgcttattt agacattttg
     1981 tacttttatt gttgaggtta ttaagcgaag cgacaatgga ttgtgttgct gcggttttat
     2041 agggtagggg agaggcagat gcgaattaaa ccagacgata actggcgttg gtattacgat
     2101 gaagagcacg atcgaatgat gctcgattta gccaatggta tgctatttcg ctcacgtttt
     2161 gcgcgcaaaa tgttgactcc agatgccttt tctcccgcag gcttttgcgt tgacgacgcc
     2221 gcgctctatt tctcttttga agaaaagtgc cgcgatttta atttatctaa agaacaaaaa
     2281 gccgaactgg tgctgaatgt actggtagca attcgctatc tcaaaccgca aatgccgaaa
     2341 agctggcatt ttgtttccca tggtgaaatg tgggtgccca tgccgggcga tgcggcctgc
     2401 gtttggttga gcgatactca cgagcaggtc aatttgctgg tcgttgaatc tggcgaaaat
     2461 gccgcactat gcctgctggc acaaccctgc gttgttattg cgggtcgcgc gatgcagttg
     2521 ggcgacgcca ttaaaatcat gaacgacagg ctgaaaccgc aggttaatgt tgacagcttc
     2581 agcctcgaac aggcagtcta acgcgccaac ttaagtgcag tcttcggtac acagctacag
     2641 caaagaatgg tgccatcatc gcccattgct gattttttca gcggcgagac ttcgccttct
     2701 aaaatctgaa cacggcaact tccacaaatg cccgcgcggc aagaataagg gatacgaatt
     2761 ccctgatttt ctaattgctc cagcaacacc tgttggttat ttccacgaaa tgcctgtccc
     2821 tgccagtcaa tatctacatt tgcgtccggt tgttgcgtga tgttggcggt atcatcagcg
     2881 gcagctgcgc cgtaaatttt tgccggagcc gttgccagaa tttccacctc atcgccaacg
     2941 cgaatcacgc cgctattacg ggcaattaaa ttctgaccaa aatcgacatc gccgttatcc
     3001 tgggcagtgc ggaaagattg caatgttttt aatggttcgc ctgccggatg tttttgccct
     3061 ttttctgggc tgacggtggt gaaaatacag cggctacaag gtttaaccac atcaaacacc
     3121 acatcaccaa tgcgaatcac tttccagcga tcttcttccc aggctgacgc gccggaaacc
     3181 accagattgg ggcggaattg ctccattttt acactggccg gacaacgttg ttggagatca
     3241 cgtaacgagg cttcgttagc aagaaggtaa ggatagccat cagcaaatga cagaggtaca
     3301 gtgttgtggc gtttcacgcg ccgggtcatt tgtggcccca cccagcgtaa ttgcacttcg
     3361 cgggagaaaa atccacttag ccatttgttg atcgcgtctg gcgcaattcg cgcggtaaaa
     3421 tgtgtgcccc aaacttcggt tggtgcgtct tgtgtggcga aatcagcaaa acgaacatat
     3481 gcgctactgc catctggtgc ggtgagatgc aagccatcat gcacaggtga aggagtaaac
     3541 cgtaccatct ggggaaactg gcgagcggta ataaacgtac cgtcaggttc cgtgatcata
     3601 aagatgcgat cgaaggccag accactgaca tcagccagag catgtgtaag accaatgccg
     3661 cgcatcgatt taacaggatg aataaaaagc cgggttaatg tcgccacggt gcggtcctca
     3721 aatgaaaata agccctcaac tttatgacat gacgcgctta ttagctataa tgcgcaacaa
     3781 ttttcttagc gcctgtccca ttaggctatt ttatttgtca gtttggccct gggttgtgct
     3841 cgaaatcctc acgtacttgt gtacgctccg ttttctccgc gctgtccatg tccagactga
     3901 ctgcaacaat tacgcctact gcggtaggct cttagagtaa aagtgacgat atgaattctc
     3961 tgtttgccag tacggcccgt gggctggaag agctgttaaa aactgaactg gaaaacctgg
     4021 gggccgttga atgccaggtg gttcagggtg gggtccattt caagggcgac acacggcttg
     4081 tttaccagag cctgatgtgg agccgcctgg cctcgcgtat tatgttgccg ctgggcgagt
     4141 gtaaggttta cagcgattta gacctctatc tcggtgttca ggcgatcaac tggacagaga
     4201 tgtttaatcc tggcgcgacc ttcgctgtcc acttcagtgg tttgaatgac accatccgca
     4261 acagtcagta cggcgcgatg aaagtgaaag acgcgatcgt cgatgctttc acgcggaaaa
     4321 atctgccgcg tccaaatgtt gatcgcgatg cgccggatat ccgcgttaac gtctggctgc
     4381 ataaagaaac cgccagtatc gctcttgatc tgagtggtga tggtttacat ctgcgtggct
     4441 atcgcgatcg tgctggtatt gcgccgatca aagaaaccct ggcagccgct attgtgatgc
     4501 gatccggctg gcagcctgga acaccgctgc tcgatccgat gtgtggttcc ggtacgttgc
     4561 tgattgaagc ggcgatgctg gcgaccgatc gcgcacccgg cttgcaccgt gggcgttggg
     4621 gctttagcgg ctgggcgcag catgatgaag ctatctggca ggaagtgaaa gcggaagcgc
     4681 aaactcgcgc ccgtaaaggc ctggctgagt atagctctca tttttacggt tcggacagcg
     4741 acgcacgggt gattcaacgt gcacgcacta acgcccgtct tgcggggatt ggtgaactga
     4801 tcacctttga ggtgaaagat gtcgcgcaac tgaccaatcc gctgccgaaa gggccgtacg
     4861 gcacagtgtt gagcaacccg ccatacgggg aacgtctgga cagcgaaccg gcgctgattg
     4921 cgctgcatag cctgctgggt cggatcatga aaaaccagtt tggtggctgg aatctctctt
     4981 tgtttagtgc ctcgccggat ctgctaagct gcttgcagct gcgtgcagac aaacagtaca
     5041 aggcgaaaaa cggcccgctg gactgcgtac agaaaaatta ccacgttgcc gaaagcactc
     5101 cagacagcaa accggcgatg gtagcggaag actacgccaa ccgcctgcgt aagaacctca
     5161 aaaaattcga gaagtgggct cgccaggaag gaattgaatg ttaccgcctg tatgacgccg
     5221 atctgccgga atataacgtt gccgttgacc gttattccga ctgggtggtg gtgcaggagt
     5281 atgcaccgcc aaaaactatt gatgctcaca aagcgcgtca gcgtctgttc gatattatcg
     5341 ctgcaaccat ttcggtactg gggattgcgc caaacaaact ggtgctgaaa acccgtgaac
     5401 gccagaaggg caaaaaccag taccagaaac tgggcgagaa gggcgagttt cttgaagtta
     5461 ccgaatataa cgctcacttg tgggtgaacc tgacggatta tctcgatact ggtctgttcc
     5521 tcgatcaccg tatcgcccgc cgtatgctcg gtcagatgag caaaggcaaa gatttcctca
     5581 acctgttctc ttataccggt agcgccaccg tgcatgcggg attaggcggc gcgctcagca
     5641 ccaccaccgt ggatatgtcg cgtacttatc tggagtgggc agaacgcaac ctgcgtctga
     5701 atggcctaac cgggcgtgcg catcgcctga ttcaggccga ttgcctggcg tggctgcgtg
     5761 aggcaaatga acagtttgat ctgatcttta tcgatccgcc aaccttctct aactcaaaac
     5821 gaatggaaga tgcgtttgat gttcagcgcg atcatctggc gctgatgaaa gatttgaaac
     5881 gtctgctgcg tgcaggtggg acgatcatgt tctcgaacaa caaacgtggc ttccgtatgg
     5941 atctcgacgg cctggcaaaa ctgggactga aagcacaaga aattacgcaa aaaacgctct
     6001 cccaggattt cgcccgtaac cgccagatcc acaactgctg gctgattacc gcagcctgaa
     6061 aggaatagta atgtcattaa tcagtatgca tggcgcatgg ctgtcgttca gcgacgcgcc
     6121 gcttctcgat aacgcagaac tgcatatcga agataacgaa cgtgtttgtc tggtgggccg
     6181 caacggcgcg ggcaaatcga cgttaatgaa aatcctcaac cgtgaacaag ggctggatga
     6241 cggtcgcatt atttacgagc aagatttgat tgtagctcgt ctgcaacagg atccgccgcg
     6301 taacgttgag ggtagcgttt atgatttcgt tgccgaaggc attgaagaac aagcggaata
     6361 tctgaaacgc tatcacgata tttcgcgcct ggtgatgaac gacccgagcg agaaaaatct
     6421 caacgaactg gcgaaggttc aggaacagtt ggatcaccac aacctgtggc agctggaaaa
     6481 ccgcatcaac gaagtgctgg cgcaactggg gttagatcct aatgttgcgc tgtcgtcgct
     6541 ttccggcggc tggttgcgta aagcggcatt aggacgcgcg ctggtgagta atccgcgcgt
     6601 gctgttgctt gatgaaccga caaaccacct ggatattgaa accatcgact ggctggaagg
     6661 gttccttaaa accttcaatg ggacgattat tttcatctcc cacgaccgtt cgtttatccg
     6721 caatatggcg acgcgcattg ttgatctcga tcgcggcaag ctggtgacct atccagggaa
     6781 ttacgaccag tacctgcttg aaaaagaaga agccctgcgc gtggaagaac tacaaaatgc
     6841 cgagttcgat cgcaaactgg cgcaggaaga ggtgtggatc cgccagggga tcaaagcacg
     6901 ccgtacccgt aatgaaggcc gcgtacgcgc cctgaaagca atgcgtcgcg agcgtggtga
     6961 acgtcgcgaa gtgatgggta ccgcaaagat gcaggtggaa gaggccagcc gctccggtaa
     7021 gatcgttttc gaaatggaag acgtttgcta ccaggttgac ggtaagcaac tggtgaaaga
     7081 tttttcggcc caggttctac gtggcgacaa aattgtcctg attggtccga atgggtgcgg
     7141 caaaaccacg ctgctgaaac tgatgctcgg tcagcttcaa gcggacagcg ggcgtattca
     7201 cgttggcacc aaactggaag tggcttattt cgatcagcac cgcgcggaac tggatcccga
     7261 taaaacggtg atggataaca ttgccgaagg taagcaagag gtgatggtta acggcaagcc
     7321 acgccacgta ttgagctatt tgcaggactt tctgttccat ccgaaacggg cgatgacgcc
     7381 ggtacgtgcg ctttctggcg gtgagcggaa ccgcttgctg ctggcgcgtt tgttcctcaa
     7441 accaagcaac ttattgattc ttgacgaacc gaccaacgat cttgatgtcg aaacgctgga
     7501 actgctggaa gaactgatcg acagctatca gggcacggta ttgctggtta gccacgatcg
     7561 tcagtttgtc gataacaccg ttacagaatg ttggatcttc gaaggcggcg gtaaaattgg
     7621 tcgttatgtc ggcggttatc atgatgcccg tggtcagcaa gagcagtatg tggcgctcaa
     7681 acagcctgcg gtgaaaaaaa ccgaagaagc cgccgcggca aaagcagaaa ctgtaaaacg
     7741 cagcagtagc aaactaagct ataaattgca gcgcgaactg gagcagctac cgcaattgct
     7801 cgaagatctg gaggcgaagc tggaagccct acagacgcag gtggcggatg cttccttctt
     7861 cagtcagcca tatgagcaga cacaaaaagt gctcgccgat atggctgctg cagagcagga
     7921 gctggagcaa gcctttgaac gctgggagta tcttgaagcg ttaaaaaatg gtggctgatc
     7981 gcaaaatagt cgatttaaac agagacagct gacaacggta aaattgcctg atgaactggg
     8041 tttatcaggc atgaaaacca acactttgtt agtcatctgt aaaatagcgc atcattaagg
     8101 agtaccaatg tgcgaacatc atcatgccgc gaagcacatc ctgtgctcgc agtgtgacat
     8161 gctggtggcg ttaccgcgcc ttgagcatgg tcagaaagcg gcatgtcccc ggtgtggcac
     8221 aacgttaacc gtggcgtggg atgcccctcg gcagcgtccg accgcctatg cgttggctgc
     8281 actgttcatg ctgttgctgt ccaacttgtt tccttttgtg aatatgaacg ttgcaggagt
     8341 taccagtgaa attacattac tggaaattcc cggcgtgctt ttttctgagg actacgccag
     8401 cctcggcacc tttttcctgt tgtttgtgca actggttccc gcgttttgtc tgataaccat
     8461 tctgttactg gtgaatcgcg cggaattacc ggtccgttta aaagagcaac tggcacgggt
     8521 gctttttcaa ctcaaaacct ggggaatggc ggagattttc ctcgcgggtg tgctggtcag
     8581 tttcgttaaa ctgatggctt acggcagcat tggggtaggc agcagctttc tcccctggtg
     8641 tttattttgt gtcctgcaac tgcgcgcttt tcagtgcgtt gatcgtcgct ggttatggga
     8701 cgacatcgcc ccgatgccag aactgcgcca gccgctaaaa ccaggcgtca cggggatacg
     8761 tcaggggctg cgttcgtgct cctgttgtac ggcaatcctt cctgctgatg aacccgtgtg
     8821 cccgcgttgt agtaccaaag ggtacgttcg gcgtagaaac agcctgcagt ggacactcgc
     8881 gctgcttgta acgtccatca tgctgtatct tccggctaat attttgccca tcatggtgac
     8941 ggatttatta ggctcgaaga tgccgtcgac gattctcgct ggggtcattc tgttatggag
     9001 cgaaggctct tatcccgtcg ctgcggtgat ctttctggcc agtattatgg tgccaacgtt
     9061 aaagatgatc gccatcgcgt ggctgtgttg ggatgccaaa gggcatggca agcgcgacag
     9121 tgaaagaatg catttgattt atgaagttgt tgagtttgta ggccgctggt cgatgattga
     9181 cgttttcgtt atcgcggtgc tctcggcgct ggtgcgtatg ggaggtttaa tgagtattta
     9241 tccggcaatg ggtgcattaa tgtttgcttt agtcgtcata atgacaatgt tttctgctat
     9301 gacgtttgac ccgcgtttgt cgtgggatcg tcaacctgaa tcagagcatg aggagtcctg
     9361 acagtatgga atctaataat ggggaagcca aaatccagaa agtgaagaac tggtctcccg
     9421 tgtggatatt tcctatcgtc acggcgctca ttggggcctg ggttctattt tatcattaca
     9481 gccatcaggg accggaagtg accctgatca ccgcgaatgc ggaaggaatt gaaggtggca
     9541 aaaccaccat taaaagccgt agcgttgacg tcggcgtggt tgaaagcgcc acactggctg
     9601 atgatttgac gcacgttgaa atcaaagcgc ggctgaattc cggtatggaa aaattgctgc
     9661 ataaagacac cgtcttttgg gtggtgaaac cgcagattgg tcgcgaaggg attagcggcc
     9721 tgggaacgct gctgtctgga gtttatatcg aactgcagcc aggcgcgaaa ggcagcaaaa
     9781 tggataaata cgatttgctg gactcgccac cgttggcccc gcctgatgcg aaaggtatcc
     9841 gtgtgattct cgatagcaaa aaagccgggc agctctcgcc aggagatccg gtgctgttcc
     9901 gtggctatcg ggtaggttcg gttgaaacca gcaccttcga tacgcaaaaa cgcaatatca
     9961 gttatcaact gttcatcaat gcaccttatg accgactggt gaccagcaat gttcgcttct
    10021 ggaaagatag tggcattgcg gttgatctga cgtcagcggg gatgcgtgtg gagatgggct
    10081 cattgacaac gctgcttagt ggcggtgtta gctttgatgt gccggaaggt ctggatttag
    10141 ggcagccagt ggcaccgaaa acagctttcg ttttgtatga tgatcagaag agcattcagg
    10201 attcgttgta caccgatcac attgattatc tgatgttctt taaagattcg gtacgcggtc
    10261 tgcaaccggg agctccggta gaattccggg gtattcgcct gggtaccgta agcaaagtgc
    10321 cattctttgc gccgaatatg cgtcagacat ttaacgatga ttaccgtatt ccggtactga
    10381 ttcgtatcga gccagagcgg ctgaaaatgc agcttggcga aaatacggat gttgttgagc
    10441 accttggcga attgttgaaa cgtggtttac gcggatcgct gaaaaccgga aacctggtca
    10501 ctggtgcact gtatgttgat ctcgatttct atccaaatac gcctgcaata accggtattc
    10561 gtgaatttaa tggttatcag attatcccga ctgttagcgg cggcctggcg caaatccagc
    10621 aacgactgat ggaagcgttg gataagatca acaaactgcc attgaatccg atgattgaac
    10681 aggcaaccag tacgctttct gaaagtcagc gcacaatgaa aaacctgcaa acgacgctgg
    10741 atagcatgaa caagatcctc gctagccagt cgatgcagca gttgccgacg gatatgcagt
    10801 caacgttgcg tgaattgaat cgcagcatgc agggcttcca gcctggctcc gcagcctaca
    10861 acaagatggt ggcggatatg cagcgccttg atcaggtgtt gcgagaactg caaccggtgc
    10921 tgaaaacgct caatgagaag agtaacgcgc tggtatttga agcgaaggac aaaaaagatc
    10981 cagagccgaa gagggcgaaa caatgaaaaa gtggctagtg acgattgcag cactgtggct
    11041 ggccggatgc agctccggcg aaattaataa aaactattac cagttacctg tggtgcagag
    11101 cggtacacaa agtaccgcca gccagggcaa tcgtctgtta tgggtagagc aggtcactgt
    11161 tcctgactat ctggcgggga atggtgtggt ttatcaaacc agtgatgtga agtatgtgat
    11221 tgccaacaac aacttgtggg ccagcccgtt ggatcaacag ttgcgcaaca ccctggttgc
    11281 caacctgagt acgcaactgc ccggctgggt ggttgcctcc cagcctctgg gaagcgtcca
    11341 ggacacgctc aatgttaccg taacggagtt taacggtcgc tatgatggca aggtcattgt
    11401 cagtggtgag tggctgttga accaccaggg acaactgatc aaacgtccgt tccgtctgga
    11461 aggagtgcaa actcaggatg gttacgatga gatggttaaa gtgctggccg gtgtctggag
    11521 tcaggaagcc gcttctattg cacaagagat aaagcgtcta ccttaattat aaagatttgt
    11581 aagtataacc gtctccggta tgttgcctga ggcggttttt ttgtttctaa cgtgcggaaa
    11641 aatttgttcc tcttcacatt ttttgtacaa ccgacatgcc cgtgtagctc acaaatatga
    11701 cagtggcgtg aattttgcgc attgacggca gttatgattc gcggtattgc ttaactgtga
    11761 ttgcacattt agtaatcact gttttctttt ccaccagaaa ccagtatgag ggaaacgagg
    11821 catgaagaga caaaaacgag atcgcctgga acgggcacat caacgtggtt atcaggccgg
    11881 catcgccgga cgctcaaaag aaatgtgtcc ctatcagacg ctgaatcaaa ggtcacaatg
    11941 gctgggaggc tggcgagaag ccatggcgga cagggtagta atggcctgat tctgtctctt
    12001 taaaaagaaa cctccgcatt gcggaggttt cgccttttga tactctgtct gatgataatc
    12061 agaaggcaga cgtatcctgg aacagaccga ctttcaggtc gctggcggta tagatcagac
    12121 gaccatcaac cagcacttcg ccatctgcca gacccataat cagacgacga ttaacaatgc
    12181 gtttaaagtg aatacggtag gtcacttttt tcgctgtcgg cagtacctga ccagtgaatt
    12241 tcacttcgcc aacgcccagc gcgcggcctt taccttcgcc gcccagccag ccgaggtaga
    12301 accctactag ctgccacatt gcgtccaggc ccaggcatcc cggcataacc ggatcgccaa
    12361 tgaagtggca tccgaagaac cacagatccg gattgatatc cagttctgct tcaacatacc
    12421 ctttgtcgaa gttaccaccc gtttcggtca ttttgaccac acggtccatc atcagcatgt
    12481 tcggtgctgg caattgcggg cctttagcgc caaacagttc accgcgacca gaggcaagaa
    12541 ggtcttcttt tgtataggat tcgcgtttat ctaccatgtt ctctgtaagc cttattttat
    12601 tgaagcacgc aggatagcta acacgtgtac gctgaacaag tccgatcagt tcggaataaa
    12661 ccagttcagc caacgtaatg gccatggaaa acggtgacgt ccttcctgtt gcgatgcttg
    12721 cgcgatacgt tcctggatgg tttgcatcag cgtcgtttgg ccttcgccat cccacaccag
    12781 atttaataat aacggcagtg cgtcagtcac atcgtctact gcccagatgg tgaatttgcc
    12841 ttcttctacc gctttcacca gttcactgtg aagacttaaa tggcgaacgt tagctgtggg
    12901 gataatgaca ccttgtttcc cggttaactc acgttgctgg caaatagcaa agaagccttc
    12961 gattttctca tttaaaccac cgaccggctg ggcgcgaccg aactgatcga ctgaacctgt
    13021 gatagcgata ctctgattca ccggcacatc ggcgagggcg cttatcaggg cgcagagttc
    13081 agccatcgag gcactatctc catcaacttc actgtatgac tgctcaaatg tcagcgatgc
    13141 tgagaagggg atctgttgct caagctgtag ttccgacatc aggaacgctt gcatgatcat
    13201 catccctttc gcatggatat tgccgccaag ttccgctttg cgttcgatgt cggtgaattc
    13261 accatcgcca atatgcacaa cgcagctaat gcgagaaggt tcgccaaaag cgcgtggatg
    13321 acccggaaat tcaatgaccg aaagggcgtt aatttgcccg atgcgttcgc cttcggtttc
    13381 aatcaggatt tgctcctgaa ggatctcatc ctgcatacgt tcagcgagga aaccttcgcg
    13441 ccattcacgc tgctgcagca ttaagtttag ctgctcgccg gagaaggtgt cgccatcaca
    13501 cagggaggcg acctctttac actggcggag gatccactgc gggctaagcg gaagtgtttc
    13561 ttgttcaccg gtgtagcgtg ctgcttcgcg gataagtacc ggccaggcat ccgctcccgg
    13621 ggcaggtaag tgattatgtc tggcggtaaa tgtcacccag cgacaccact ggcttactga
    13681 ctccgcatcg acaatctgca gagtatcttc aaattcgcta taaatagcct gctctgaaag
    13741 ctctggctcc atctcctgga aatcagccaa tgattcgcgt tcgcctacca gaatgacttt
    13801 cagcttcaat ggcatcgaag gcacagagac agggagaggg cgcgactcat caaacgcaac
    13861 ccagtcaaaa cgctcgcggt taacgatatt tttcagccgc atccacagca gaggttgcgc
    13921 cagcagtgta cgcaaagaga tgatgagaat accgccattt gcctgatgca ccagaccagg
    13981 ctgcagggta atgtcgccat taaactggcg caggcagcca aagagttgct ccgcttctac
    14041 ccagtcggca gcgacaactt gcgttaaagt cgcaaaatta tcatctgcac tcactgcgtg
    14101 acgtaagcgg atggagtggc cggaaacctc atagtgatcg cccaccagtt ggcctgcatc
    14161 gctttgtagc gtacgcgcgg catcggcaat aagattcaga tactcagact cttccggggc
    14221 cttagccagc ataaaagagg aggatgctcg cgtatgcagc aactgctcca gcgcaaattg
    14281 cagccgcggt tgagtatcac tgaataaagg atcgttttcg tcaatcaaat ttggctgagc
    14341 aaatatttcc tgatagctat cggtatcagg aaccaggtca cgccatgcaa gtttcgtaat
    14401 ggtcaaagtt gatgtttttt agtctgttgt caaagccgcg attataccgt aaccggcact
    14461 acagcacacg tagaaagcac cgacaatact cctggcatgg gcgttaaagc tcacaggatg
    14521 gagattcttt tcttcactgg cctaaaaagc tgatattctg taaagagtta cacggtaaca
    14581 ttgagatcgc tatgaaatat caacaacttg aaaatcttga aagcggttgg aaatggaagt
    14641 atctggtgaa gaagcatcgc gaaggggagt taattacccg ttacatagaa gccagtgccg
    14701 cccaggaagc cgtcgatgtg ttgctctcgc tggaaaatga acccgtgctg gtaaatggct
    14761 ggattgacaa gcatatgaat ccggaactgg tcaatcgcat gaagcaaacc attcgggcca
    14821 gacggaagcg ccattttaat gcggaacacc agcatacgcg caaaaagtcg atcgatctgg
    14881 aatttattgt ctggcaacgt ctggctggtc ttgcgcagcg tcgcggtaaa acgctttctg
    14941 aaacgattgt tcagctgatt gaagatgcgg aaaacaaaga gaaatacgcg aataaaatgt
    15001 cttctctgaa gctggatctg caggcattgc tgggtaagga ataactgacg aaagtcagtt
    15061 caatttacta aaggcaaaaa aaaccccgca gcagcggggt ttttctacca gacgataact
    15121 taagcctgcg gctgagttac aacgtctttg atacctttaa cttcgatctc tacgcgacga
    15181 tccggagcca ggcagtcgat cagtgcagca cgctgtttca cgttgtcaca ggtgttgcca
    15241 gtaaccgggt tggattcgcc cataccacgt gcggagatct tgtctgccgg gatacctttg
    15301 gagatcaggt aatcaacaac agactgagca cggcgctcgg acagaccctg gttgtaagcg
    15361 tcagaaccga tgcggtcggt gtaacccaga acaactacgg aaccgtcttt cggatccagg
    15421 ttgctcagct ggctgtacag ctgatccaga gcagcctgac cttccggttt cagggttgct
    15481 ttgttgaagt tgaacagaac gtcagacttc agagtgaagt gcttggtctg tacttccggt
    15541 gccggagctg gagccggagc aactactgga gctgcttcgc cctgaccgaa acggtaggaa
    15601 acacccaagc tcagcatgcc gttgtccgga cgagtgccga tggtgtgtgc gtcaccgatg
    15661 ttgttggtcc actggtattc cagacgggta gcgatttcag gagtgatcgc gtactcaaca
    15721 ccgccagcga agaccggaga aacgccggtg tcgtggtttt taccataaac gttggattta
    15781 gtgtctgcac gccataccat accacccaga cgagtgtaga tgtccaggtc gtcagtgatt
    15841 gggtaaccca gtttagcggt cagttgaacg ccctgagctt tgtatgcacc gttttcaacg
    15901 ctgcctttgt acggcatacg acctaaccag tcgtaaccca tttcaaagcc aacatacggg
    15961 ttaacctggt aaccaccaaa agcaccagcg cccagttggt tttcatgggt cgggccattg
    16021 ttgttgatga aaccagtgtc atggtactgg gaccagccca gtttagcacc agtgtaccag
    16081 gtgttatctt tcggagcggc ctgcgctacg gtagcgaaac cagccagtgc cactgcaatc
    16141 gcgatagctg tctttttcat tttttgcgcc tcgttatcat ccaaaatacg ccatgaatat
    16201 ctccaacgag ataacacggt taaatccttc accgggggat ctgctcaata ttaactctac
    16261 cgatatcttc ggcttatgcc gagcacccct ggcgatgtaa agtctacaac gtagttgaaa
    16321 acttacaagt gtgaactccg tcaggcatat gaaaaaaaag tcttgtataa ggtatgttta
    16381 atcttttttg tcagcgacaa tttacagaag aaaatcgcgg aaaccgcttc agacaagcct
    16441 ccgcaaggaa aattagtcac gactgaaagc attggctggg cgacaaaaaa agttccagga
    16501 ttaatcctaa atttacttaa tgatacaaat tagagtgaat ttttagcccg gaaagttgtc
    16561 tcgtggcgtg agaggatgcg cttaccggac gcataataaa ccccatagcg ttaccttcat
    16621 ttgccgcatc aacaagttca gcatgctctt cttcagtcaa atcatctgcc aaccaaccga
    16681 tcaccacact gtaattgccc gtgcgtaaag cgcgaaccat tgactccaca gtgtggcaag
    16741 gggagagctg gctaatctgc attactttcg ttaagggtag cccagatgcc tgaacccatt
    16801 cccgactcag tttttgttgc ggtgttaacc agagttgcca gcgcgattgc tgaccgagtt
    16861 gctgtaacaa tggcaacagt agaagttgcg tcatcatggg ctgatcttcg cgatagacaa
    16921 cttcactgat aagcccggct gtagtgtttt ccgtagagac acgcgcaatt ttacttgctg
    16981 cggatgagaa cgacgaagaa cgatgtgcat agcctgaagt gtacataatc aatccagccc
    17041 ctgtgagtta ctgtatgaat atacagtaca tccagtgaca acaaagatca accctatttt
    17101 cggaaagagc ctcgcaaatt ttttcgttgg tgacgggaaa acataaatta atcttgcccc
    17161 ttaagaataa gttgcctatt ttcgtagtta acggatccgt taatgtgaat cattctttta
    17221 tgttatgatt ttaaaaggaa ctttatgaaa agcctctcct ataagcggat ctataaatca
    17281 caagaatacc tggcaatgtt gggcacaatt gaataccgat cattgtttgg cagttacagc
    17341 ctgaccgttg acgacacggt gtttgcgatg gtttctgatg gtgagttgta tcttcgggct
    17401 tgtgagcaaa gtgcacagta ctgtgtaaaa catccgcctg tctggctgac atataaaaag
    17461 tgtggccgat ccgttaccct taattactat cgggttgatg aaagtctatg gcgaaatcaa
    17521 ctgaagctgg tgcgtctgtc gaaatattct ctcgatgcag cgctgaaaga gaaaagcacg
    17581 cgcaataccc gggaaagact gaaagatttg cccaatatgt cttttcatct ggaagcgatt
    17641 ctcggggagg tggggattaa ggatgtacgg gcgttacgta tacttggggc aaaaatgtgt
    17701 tggttgcgac tgcggcagca aaacagtctg gtgacagaaa agattctgtt tatgcttgaa
    17761 ggtgccatta tcggcattca tgaagctgcg ctcccggtgg cacgccgcca ggagcttgca
    17821 gaatgggctg actcacttac gccgaaacag gagtttcctg cggaacttga gtaatctggc
    17881 gttgcagacg accaatctca ggcagtaatg caatcaataa tccaacttgt tgtacgacca
    17941 gaggttcttt gctgtctgcc cgtggttcaa gttgctgcat ccgctgtttc aggctagcta
    18001 atgcctcatt gacgcgttct tcatcagcag gttgatgatg taacgcgtca tcaacatagc
    18061 aaactgcgtc atcaagaaac gccagaattt caggattagt taactgctcc cggtgagcac
    18121 cgagggctga gatatagctg gtaaacgtat ggttaaggca cagcaaccga aacgcggctt
    18181 cgcgaatttg cggggtaacg ttcggctcgc tggacatatt tgataccacc gacgccagct
    18241 cagcatcacg gttgtgtgca tcgcggcggg caatacgata cgccagacgg ttatcacgcc
    18301 cctgatggta ttgctccagt atggcatcga gataccgaca gttggcctct gtggcgcgtt
    18361 cgagcatgcg cggcaaattg cgaaactgcc agtcaggcca gatgtagctc actgccgccc
    18421 acgcaatggc acaaccaatc agcgtatcga ttacgcgagg taacgctact tcaaaacctt
    18481 cacccagtaa gttaaaacac agtagcacca aaagtgtgat gaacatcgtt gcatgagcgt
    18541 attgcacgtt acggaaggca aaaaagagca cgccggtaat aaccagcagc accagctgcc
    18601 cttccagtga tggcacaaac cacagcacag gaatgccaat ggcgatacct accagcgtac
    18661 caataatcct taacttcagg cggtggcgcg tggcgttata gtttggctgg cagacaaaca
    18721 aacttgtcag caagatccaa aacccgtgat gcattccggt tatttgaatg atggcgtagc
    18781 cgaagcacaa caccagcgac attcttaccg catgacggaa gagggcggat tccggcgtga
    18841 agtgacggct aagacgcagc cagatatcac tcaacccgtg cgggctgtca tcagcgagct
    18901 cattttcgtc attattatgg ggtagtgcct gggcctgttc tgattcaatt gttgccagtt
    18961 gggcatcaat ggcgcgtaaa ttgttcagca aaaatcccag tgttttgagt aaatcggcgg
    19021 gtgcgccgtt atcgcgcatc cgctccagcg cagcatcaat atgcgtaaaa gcgcgctcaa
    19081 aatgcggatc atgttgataa ggctgacgca acaaaataca gcgtgacagt tgctggcacg
    19141 cctggccctg catcgacatc agccgctgaa aacggaacag cacgtcgctg tggcgaaaat
    19201 gttcacgcaa tgtttgatac tgaatatgag aagagctggc acgctcgtga atatcctgtg
    19261 cgacaaagta ataatgcagc gtgcgacgcg ttccccgttg accacgatcg ccacgtaagc
    19321 gggtcagcag cgagagtttc gtctgattca atgtcgccat cagcagaccg ttggcgagag
    19381 ccaaatcgta cagcggtgcc tggctttcat cttcaatatc aggatcaaac atgcgcgact
    19441 tgagctcaag ataacgcgcc agttgttcat agcaacgcgc caggttgtcc tgcagcgggc
    19501 ggaccgggaa cagcagatga ccaataagtg tcaggacgtt gtaccagacg gcaccggcca
    19561 gcagatacat cggctgctga taccagtgct catacagtga tgttcccaac atagtgtaaa
    19621 tggcgatcag caatgcaccg aaggcaattg ttgcatagcg ttgacccaga ccgccgagca
    19681 aaatgaagcc gctggtagag agcgttaagc caatcgcaaa tagccagggc cagggaaaca
    19741 gcaattctac tgaggccgag gcgataaaaa agcagaacag cgtaatgatg aggttacgca
    19801 aacgtcccgc cagtcggtca tcgagatcgg tcagcgccgc tgccaccatc cccagcgtta
    19861 gcggaatcgt cagttttaca tcacccagcc accacggaaa cgctgtggtt ccacaaagcg
    19921 caataaaaat acgcgcgtaa tacagccagg cgctgttcca ggtatagcgt ttgagcaaag
    19981 gacttagcat aaaggccata ttagtggatt attcaaaacg acgacgtgca ttggcttcac
    20041 gcgcagcttg cgctgtttct accgatacca cgcgacgacc aaccggccat agtgcaatag
    20101 cggcaatttt aaagttcgca atgccgacag gaatgccaat gattgaaata cattgtgcga
    20161 tgcccgttgc aatgtgcatc aggcataacc accagccaaa gaaaatcagc cagaaaatat
    20221 tcaataccgt accgccagta ttcagcagca catttttgcc agccgggttc agttcatcga
    20281 catgaatagc ttcattgcca taaggcacca gagacagttt agtgatctcc cagcaggatc
    20341 gtgtcagcgg taaggtaaaa atcagcacaa tactgaccag agtcgccaac agccagccca
    20401 gagtggtggc aaatccgcca agcacaaagt tcagaatgtt caaaacggta cgcataaaac
    20461 ctcgctttac tgtggttttc agtaatgggc ggcaattgta acgttttttt gggctggagc
    20521 acgttttctc tgacggttac actgataaga aataatttcg tgtggatcta cagagtcatg
    20581 gaactgaaag cgacaacgct tggaaaacgt ctggcacagc acccttacga tcgggcggtg
    20641 atcctcaatg ccgggattaa agtctccggc gatcgccacg aataccttat tcctttcaat
    20701 caattactgg cgattcactg taagcgtggt ctggtatggg gcgagctgga atttgtactg
    20761 ccggacgaaa aagtggtgcg tctgcacggc accgaatggg gcgagacgca gcgtttttac
    20821 catcatcttg atgctcactg gcggcggtgg agtggcgaga tgagcgaaat tgcgtctggt
    20881 gttttacgcc agcaactgga tttgattgcc acgcgcactg gagaaaataa atggctgacg
    20941 cgtgagcaaa cctctggcgt tcagcaacaa atccgccagg ctttgtcggc gttgccgttg
    21001 ccgttgccgg ttaaccgact ggaagaattc gataactgcc gtgaggcgtg gcgtaaatgt
    21061 caggcctggt tgaaagatat tgaaagcgct cggttgcagc ataaccaggc gtataccgaa
    21121 gccatgctta ccgagtatgc ggattttttc cgccaggtcg agtcttcacc gctgaatccg
    21181 gcgcaggccc gggcagtcgt taatggcgag cattctctgt tagtgctggc aggtgcagga
    21241 agcggaaaaa cgtcggtgct ggtggcccgt gcaggctggt tgctggcacg tggtgaagcg
    21301 tcccctgagc aaattttatt gctggcgttt ggtcgcaaag ccgctgaaga gatggacgag
    21361 cggattcgcg aacggctaca taccgaagac attaccgcac gcacgtttca tgcgctggcg
    21421 ctgcatatta ttcagcaggg cagcaaaaaa gttccgatag tcagcaaact ggaaaatgat
    21481 accgctgccc gtcatgaact ctttattgct gagtggcgca agcaatgcag cgaaaagaaa
    21541 gcgcaggcga agggctggcg gcaatggctg acggaagaaa tgcagtggtc agtgccagaa
    21601 ggtaacttct gggatgatga aaaattacag cgtcgccttg cctctcgcct cgatcgctgg
    21661 gtaagtctga tgcggatgca cggtggtgca caggcagaaa tgattgccag tgtacccgaa
    21721 gagattcgcg atctgttcag taaacgtatc aagttgatgg ccccgttatt aaaagcctgg
    21781 aaaggtgcgc tgaaggcaga aaacgctgtc gatttttcgg gccttattca tcaggcgatt
    21841 gtgattctgg agaaaggtcg ctttatcagc ccgtggaagc atattctggt tgatgaattt
    21901 caggatatct cgccgcagcg ggcagcgttg ttagcggcat tacgcaagca aaacagtcag
    21961 acgacgttgt tcgctgttgg tgatgactgg caggcgattt accgattcag cggtgcgcaa
    22021 atgtcgctca ccaccgcttt ccatgaaaac tttggtgaag gcgaacgttg tgatttagac
    22081 acgacttacc gttttaacag tcgtatcggt aaggtggcaa accgttttat tcagcagaac
    22141 ccaggccagc tgaaaaagcc gctaaacagc ttaaccaatg gagacaaaaa agccgtcacg
    22201 ttattggatg agagtcaact tgacgctttg ctggataagc tctctggtta tgccaaaccg
    22261 gaagagcgca ttctgatcct ggcgcgttac catcacatga ggcctgccag cctggaaaaa
    22321 gcggcaacac gctggccgaa gttgcaaatc gactttatga ccattcatgc cagcaaaggg
    22381 caacaggcgg attacgtcat catcgttggc ttgcaggagg gaagtgatgg ttttccggct
    22441 gcggcgcggg agtcgattat ggaagaggcg ctactgccac cggttgagga tttcccggac
    22501 gctgaagaac ggcggttaat gtacgtggcg ctgacccggg cacgccatcg ggtatgggca
    22561 ctgtttaaca aagagaatcc ctctcccttt gttgaaatac tgaaaaatct ggatgtgccg
    22621 gtggcgagaa aaccgtaaga aacaggtggc gtttgccacc tgtgcaatat tacttcagac
    22681 ggtccgcgag ataacgctga taatcgggga tcagaatatc gaccgcgtcg ttgaaatgcg
    22741 gcgactggat tatgaagtct gccgttgcca cgttggtggc gaccggaatg ttccataccg
    22801 tcgccagacg cagcaaggct ttcacgtcag gatcgtgcgg cacggcattt agtggatccc
    22861 agaagaaaat caatacatca attttccctt ctgagatcaa tgcgccaacc tgctggtcac
    22921 cccccattgg gccactcaac atcgcgttga cgttcatgcc ggtcgcgcgg gaaattaagt
    22981 taccggtagt gcctgttgca tacagtacgt gttgttccag taacggttga tgccgttcca
    23041 cccagctcat cagcatttgt ttgcagtgat cgtgtgccac cagcgcaata tgtttccgcg
    23101 caggtaaagt gcgagtcgtc agttccataa tgtacatccg tagtcaactt tcctacagat
    23161 tactgtaagc acttatcgct gcaagataaa gaccgaaaaa gcctgcgcac aggcacaaaa
    23221 atctcaggaa gatggttgtt tttccgccca ctgcaggaaa gtatttcgcg tttgtgggtc
    23281 agccagttta aaccaatact tcagccgttg ttctgtgagc acctgagact gcggtggaat
    23341 agcatccagc tcggaaacac ccgaaagcag cgtactgtca tctgccatca tcgtggcaaa
    23401 ttgcggtagt gaagcgcgtt tcgcggattt gttatagcgt tcaacctcga cctcataatc
    23461 aatcgttttt gccgttgagg taatggcgag aatatccagc tttaccggaa tcggcgtcgc
    23521 atcgccatcc aacaattcaa ggcgcggcgc ggcatcaaaa tggttagctt cccgctcatt
    23581 ctccaggcga ggcaggcgaa aattgacctg gttgatgagc tgggtattaa aactgaccac
    23641 tagcggtggg gagatataca gccgttcttc actattggaa agatgaatcg tcttctcaac
    23701 gcgaaacact aactgatgcg gtccattatc cagttcaatg ctgtccgcac cgcgcagcag
    23761 agagctggaa accttcttgc cgtcgagtac cagaagatcg acatcggttg aaagccgcag
    23821 cgtggtggca aaaacggata ccggcaaaca taatgcaatc aaggtggtca cgatgccggt
    23881 tttcataggt agctcctgtc aaaagaccgc ccgaataata atgtgtcaaa atttttcttt
    23941 aatcatactt actaacatat agacatattt cccgcttttg ctctcattca ttcgtattag
    24001 ctgcatggtt ggcatgtcgg ctttgtcgta cactttgtta aacagtctgg aggaaataat
    24061 gaaagaaacc gatattgcag gcattttaac gtccactcac accattgcgc tggtgggggc
    24121 aagcgacaaa cccgatcgtc ccagctatcg cgtgatgaaa tatctactcg accaggggta
    24181 tcatgtcatt ccggtttcgc caaaagttgc cggcaaaacg ctgctgggcc agcaggggta
    24241 tggcacgctg gcagacgttc cggaaaaggt cgatatggtc gatgttttcc gtaattcaga
    24301 agcggcgtgg ggcgtggcac aggaagctat tgccattggc gcgaaaaccc tctggatgca
    24361 actgggggtg attaatgagc aagcggcagt actggcacgg gatgccgggt tgaatgtggt
    24421 gatggatcgc tgcccggcta ttgagatccc tcgcctgggc ctggccaaat aaaaaatccc
    24481 cggaaggcaa aaaccttccg gggattcgtt cagggatcag ttacgcagac gcggggcctg
    24541 gagttgtttg cggatggtct gcgccagctc atccatggat ggctgttcag gatgttcatc
    24601 ctgcaattcg ctacttagct gggcttcagc caggtaggta tgaaccggta ggccgttatc
    24661 gtcctccatc actacgtgat accacggagc ggcgcgaagc tcgtcattta ccgccagctc
    24721 atcaggcgac ggttcagaga gcgaataaac cgggtcgata tccacgacca ctccgagata
    24781 acctaacagg gaatggcgga cctgctggcc gataccgaat ttgctggcaa tcatagtcac
    24841 ctcccgggaa atctttacct ttgatataag ggtaaaattc cacatttcaa gttacatgac
    24901 gcgacaggca aaccctttca gatatagccc ttccggatag gtagcgatca ccggatgatc
    24961 ggctgcctga cggaactgct ctataaattg tacatcacgg ccggcatcaa ttgcggcatc
    25021 cgcgatgatt ttctgaaata aatcgctggt catcagaccg gaacaggaga aagtcaggag
    25081 aataccgcct tcattcagca actgaatcgc cagcatgttg atatctttat agccacgaca
    25141 cgcgcccatc aactggcttt tattctcaac aaacttcggc gggtccatca cgataacgtc
    25201 aaatttttca ccgcgatcgc gataagtacg cagcaattta aagacatcat cacggacaaa
    25261 ctcagccttg ctcagatcca gtttgttcag ctcaacgttc tgccgtgcaa tatccagcgc
    25321 ttcctgggag gtatcaacgc tgacaacctg gctgcaaccg cccatcagtg ccgatacggc
    25381 gaaaccaccg gtataggaga aacagttcag cacacgttta ttttcaacgt agcggcgggt
    25441 agccaggcgg ctgtctcgct ggtccaggta gtagcccgtt ttgtgtccgt gctgaatatc
    25501 caccagcagc ttcatgccgt gttcttcaat cggcagcagg gcaggcggca actcgccggt
    25561 gacgaggccc agggtcagct ccatcccttc ttttttacgt accgcaacat cgctgcgatc
    25621 gtaaatcgca cattccgggt acagcgtttg cagggcacta actaatgccg cgcgctgata
    25681 ttctgcccca gcactcagca gttgcagcac cagaaaatta ccgaaacgat cgatagtaat
    25741 acccggcagg ccatcagatt ctccggcgat taaacgatag ctgtcgaggc catctttttg
    25801 cgccagccag tcacgccatt tttgtgcttg ttgcaaacgg cgggaaaaaa aagcaatgtc
    25861 gatagactca gacgggtcaa acgtccagac gcgcgcccgg atttgcgaag ctggcgaata
    25921 agcgccgcgt gctaaccatt ttccctgatg atcaacaata tcgatggttt caccgaggct
    25981 ggctttacct tccatgcggg caacggcccc ggaaaagacc cacggatggc gacgaagtaa
    26041 tgatttttcg cgccctttgg ctaacactaa acgtacactc ataatttact tttctgtcga
    26101 tgcaaagaaa tgggcgtcat tgtccggagt tttccatgga tttgcaacgc gtccattaag
    26161 gataaggaga gcagcaatgt cgaaagtctg cataattgcc tgggtttacg ggcgagttca
    26221 gggcgtagga tttcgctaca ccacacagta cgaagcgaaa agactgggtt taaccgggta
    26281 cgccaaaaat cttgacgatg gcagcgtgga agtggttgcc tgcggtgaag aagggcaggt
    26341 ggaaaaatta atgcagtggt taaagagtgg cggcccgcgt tctgcgcgtg tagaacgggt
    26401 gctcagcgag ccgcatcatc cctcggggga attaaccgat tttcgtatcc gttaaataca
    26461 ttttaccggt tttggcaggc cagcaatttt ggtggcttgc ttagccggac ctttcggaaa
    26521 cagtcggtat aaatagcggc tgttaccttt ttcttcgcca aatttattcg ccatcgcttt
    26581 taccagcata cgaatcgccg gagaagtatt gaattccaga tagaaatcac gcacaaaacg
    26641 caccacttcc cagtgttccg gtgacagcga aatcccttcg ttctctgcaa tcaccactgc
    26701 cagcggctca ctccactggc tgctttcttt gagatagcct tcggtatccg tttctatctc
    26761 tttaccttcg aagatcagca taattattac taccttaatc agactggcgg cagtgtaaca
    26821 aaaaacaaag ccccgcataa agcgaggcta tgaaagtgtt agcgggtgag attaatcgcg
    26881 gctggcgaag cccagaatgc tcagcaggct gacgaagatg ttgtacagcg aaacatacag
    26941 gctaaccgtg gcacgaatat agttcgtttc accgccatga acgatgttgc tggtttcaaa
    27001 caaaatagcg ccagaggaga tcaaaatgaa gaccgcgctg atcgccagat gcagagcagg
    27061 cagctgcagg aagatattag caaccatacc aatcagcacc accacaatac ccgccatcag
    27121 cataccgccg aggaacgaca tatctttgcg ggtggtcagc acatatgcag agcagcagaa
    27181 gaacactaac gccgttccgc ccagagccat agcgattacg tcacccattc cggcagacag
    27241 ataggtgttc agaataggtc cgaggatata acccagaaaa ccggtaaagg cgaatgcgga
    27301 gataatcccg gtcggcttat tcgccgtttt ataggtcagg aacatcaaac catacatacc
    27361 caccagcgtc agaatcagac ccggagatgg cagcatcagc accgtactgg cagttgcggt
    27421 aatcgccgaa aaggccagcg tcaggctcag cagaaaatag gtattacgca gcaccttatg
    27481 ggtgctaagc agtgatgtac ggtcatgtga agaactaaca atacgatcca ttgagtcact
    27541 ctctatgaca gatgtaatta attaagcagc ataatgataa tgcgtaaggg cacccagaag
    27601 ttttacccat ctttacgcat ttgatctgga acaggtttaa cagcggatta tcaggtcatt
    27661 aagcaaatat aacgccctga gaatttcgac aggcaaaaga aaaaggggtt agcatttagc
    27721 taacccctta tcttatttgg cggaagcgca gagattcgaa ctctggaacc ctttcgggtc
    27781 gccggttttc aagaccggtg ccttcaaccg ctcggccaca cttccggaat gacgcgcact
    27841 ataaacatcc cgatgcggcg tgtaaacccc taatttgttt gtttgcctga aaaacagcca
    27901 aaagtgcatt gatagcgtga aataacagca gattgatcat ttcatcacca tgaattcctt
    27961 ctcttttact cgtttagcaa ccggctaaac atccccaccg cccggcaaaa agaaaaatag
    28021 gtccattttt atcgctaaaa gataaatcca cacagtttgt attgttttgt gcaaaagttt
    28081 cactacgctt tattaacaat actttctggc gacgtgcgcc agtgcagaag gatgagcttt
    28141 cgttttcagc atctcacgtg aagcgatggt ttgccttgct acagggacgt cgcttgccga
    28201 ccataagcgc ccggtgtcct gccggtgtcg caaggagaag agacgtgcga tatgaataac
    28261 gaggaaacat tttaccaggc catgcggcgt cagggcgtta cccggcgcag ctttctcaaa
    28321 tattgtagtc tggctgccac gtcgctggga ttaggcgcgg gaatggcacc aaagattgcc
    28381 tgggcgctgg agaacaaacc ccgcattccg gtggtatgga tccacggtct ggaatgcacc
    28441 tgctgtaccg aatcttttat ccgctccgct cacccactgg cgaaggacgt catcctttcc
    28501 ctgatttccc tcgattatga cgatactttg atggctgccg ccggaaccca ggcggaagaa
    28561 gtcttcgaag acatcatcac gcaatacaat ggcaaatata tcctcgcagt agaaggtaat
    28621 ccgccgctgg gcgagcaggg gatgttctgt atcagcagcg gtcgaccgtt tattgagaaa
    28681 ctcaaacgtg ccgctgccgg agccagcgcg attatcgcct ggggaacctg cgcgtcctgg
    28741 ggctgcgtgc aggccgcgcg gcccaatccg acgcaggcaa cgcctatcga caaagtcatc
    28801 accgacaaac ccattatcaa agtacctggc tgcccgccga tcccggatgt gatgagcgcc
    28861 atcattactt acatggtgac ctttgatcgc ttgccagatg tcgacagaat gggccgtccg
    28921 ctgatgttct atggtcagcg aatccacgat aaatgctatc gccgcgccca cttcgacgcc
    28981 ggagagttcg tccagagttg ggatgatgac gctgcccgca aaggttactg cctgtacaaa
    29041 atgggctgca aagggcctac cacctataac gcctgttcct ccacacgctg gaatgatggc
    29101 gtttctttcc caatccagtc tggtcacggc tgcctgggct gtgcggaaaa tggtttctgg
    29161 gatcgcggtt cgttctacag ccgcgtggtc gatattccgc aaatgggtac tcattccacc
    29221 gccgataccg tcggtttaac cgcgcttggc gtggtggcag cggctgttgg tgtgcacgca
    29281 gtcgccagcg ccgttgacca gcgcagacgt cataaccagc aacctacaga aaccgaacat
    29341 cagccaggca atgaggataa acaggcatga gcactcagta cgaaactcag ggatacacca
    29401 tcaataatgc cggacgccgc ctggtggtcg acccgattac gcgcatcgaa ggccacatgc
    29461 gctgcgaagt gaatattaac gatcagaatg tgatcaccaa tgccgtctcc tgcggcacca
    29521 tgtttcgcgg gctggagatc atcctacaag ggcgcgaccc gcgcgatgcg tgggcgttcg
    29581 ttgaacgtat ctgcggcgtc tgtactggcg tacacgccct ggcttcggtt tacgccatcg
    29641 aagatgctat cggtattaaa gtgccggaca acgccaatat catccgcaac attatgctgg
    29701 caacgctctg gtgccacgat catctggtgc acttctatca gcttgccggg atggactgga
    29761 tcgatgtgtt agatgcgctg aaagccgacc cgcggaaaac ctccgaactg gcgcaaagtc
    29821 tctcctcttg gccgaaatca tcccctggct atttcttcga cgtacaaaac cgcctgaaaa
    29881 aatttgttga aggcgggcag ttggggatct tccgcaatgg ctactggggg cacccgcagt
    29941 acaaactgcc gccagaagct aacctgatgg gctttgccca ctatctcgaa gctctcgatt
    30001 tccagcgtga aattgtcaaa atccacgcgg tctttggcgg taaaaacccg catccaaact
    30061 ggattgtcgg cgggatgcct tgcgccatca acattgacga aagcggcgcg gtcggggcag
    30121 tcaatatgga acgcctgaac ctggtgcagt caattatcac ccgcacggcg gacttcatta
    30181 acaacgtgat gatccccgac gccttagcca tcggtcagtt caacaaaccg tggagcgaaa
    30241 tcggcactgg tctttctgat aaatgcgttc tcagctacgg cgcattcccg gatattgcca
    30301 acgactttgg cgagaaaagt ctgctgatgc ctggcggcgc ggtgattaac ggcgacttca
    30361 acaatgtgct gccagtggat ttggttgatc cgcagcaggt gcaggagttt gtcgaccacg
    30421 cctggtatcg atatcccaac gatcaggtcg ggcgtcatcc gttcgatggc atcaccgacc
    30481 cgtggtacaa ccccggcgat gtcaaaggca gcgataccaa cattcagcag ctgaatgaac
    30541 aggaacgcta ctcgtggatc aaagcgccac gctggcgcgg taacgcgatg gaagtggggc
    30601 cgctggcgcg cacgttaatc gcttatcaca aaggcgatgc tgcgaccgtt gagtcggtcg
    30661 atcgcatgat gtcggcgttg aacctgccgc tttccggtat ccagtcaacg ttaggccgca
    30721 ttttgtgccg cgcgcacgaa gcgcagtggg ccgcaggtaa gttgcagtat ttcttcgaca
    30781 agctgatgac caacctgaaa aacggcaatc tcgccactgc ttccacggaa aaatgggaac
    30841 ctgcaacctg gccgacagag tgccgtggtg tcggttttac cgaagcgccg cgcggggcgt
    30901 taggccactg ggccgccatt cgcgatggca agattgatct ctaccagtgc gtggtgccga
    30961 ccacctggaa cgccagcccg cgcgatccca aagggcagat tggcgcttat gaagcggcgc
    31021 tgatgaacac caaaatggcg atccccgagc aaccgctgga gatcctgcgt actctgcaca
    31081 gctttgaccc gtgcctcgcc tgttcaacac acgtgctggg cgacgacggt agcgagctga
    31141 tctccgtgca ggtgcgttaa cagcgaagga gaatcatcat gcaacagaaa agcgacaacg
    31201 ttgtcagcca ctatgtcttt gaagcgccag tccgcatctg gcactggttg acggtgttat
    31261 gcatggcggt gttgatggtc accggatact ttatcggcaa gccgctacct tccgtcagcg
    31321 gcgaggcgac gtatctgttc tatatgggct acatcaggtt aattcacttc agcgccggga
    31381 tggtttttac cgtggttttg ctgatgcgga tctactgggc ttttgttggc aatcgatact
    31441 cccgcgagct gtttatcgtg ccggtatggc gtaaaagctg gtggcagggc gtgtggtatg
    31501 aaatccgctg gtatctgttt ctggcaaaac gtccgagtgc cgatataggc cataatccca
    31561 tcgcccaggc ggcgatgttc ggctatttcc tgatgtcggt ctttatgatc atcactggtt
    31621 ttgcgctgta cagcgaacac agccagtacg ctatttttgc gccgttccgt tatgtggtgg
    31681 aatttttcta ctggacgggt ggcaactcaa tggacattca cagctggcat cggctgggga
    31741 tgtggctgat tggcgcgttt gtgatcggtc atgtctacat ggcgctgcgt gaagacatca
    31801 tgtccgacgg cacggtgatc tccaccatgg tcaacggcta ccgtagccac aaatttggca
    31861 aaataagtaa caaggagtgt tcatgagcga gcaacgcgtg gtggtcatgg ggctgggcaa
    31921 cctgctgtgg gccgatgaag gcttcggcgt gcgggtggcg gaacggctgt atgcccatta
    31981 ccactggccc gagtatgtgg agattgtcga tggcggtact cagggactga acttgctggg
    32041 gtatgtcgaa agcgccagcc atctgttgat tctcgatgcc attgactacg ggctggaacc
    32101 tggaacgctg cgaacctatg ccggagaacg cattccggct tatctcagcg cgaagaaaat
    32161 gagcctgcat cagaacagtt tctccgaagt gctggcgctg gcagatatcc gcggacatct
    32221 gccagcacat attgccctcg tcgggctgca acccgcgatg ctcgacgact acggcggcag
    32281 cctgagcgaa ctggcacggg agcaactgct cgctgcggaa caatcggcgc tggcgcagtt
    32341 ggctgcgtgg ggaagtgtgc cgcaactggc taatgaatcg cgttgtctca attatgactg
    32401 tctgtcgatg gaaaattacg aaggcgttcg cttgcgccag taccggatga cacaggagga
    32461 gcagggatga gcaacgacac gccatttgat gcgttgtggc aacgaatgct ggcgcgcggc
    32521 tggacgccgg tcagtgaatc ccgtcttgac gactggctta cgcaagcgcc agacggcgtg
    32581 gtgttattaa gcagtgaccc gaaacgcacg ccagaggtca gcgataatcc ggtaatgatt
    32641 ggcgaattac tgcacgagtt tcccgactat acatggcagg tggcgattgc tgaccttgag
    32701 cagagcgaag ccatcggcga tcgctttggc gtctttcgct ttcctaccac tttagtgttt
    32761 accggcggaa actatcgcgg cgtgctgaat ggtattcacc cgtgggcgga actgataaac
    32821 ctgatgcgcg ggcttgtcga accgcagcag gagcgtgcct catgagcgaa acttttttcc
    32881 atctgctggg gccaggaacg caaccgaacg atgacagttt cagcatgaat ccactgccga
    32941 tcacctgtca ggtgaatgat gaaccgagta tggcggccct ggagcaatgt gctcacagcc
    33001 cgcaggtgat tgcgctgtta aacgagttac aacatcaact aagcgaacgc cagccgccgt
    33061 tgggcgaggt gctggcagtc gatctgttaa atctcaacgc cgacgatcgt cactttatca
    33121 atacgcttct cggggaaggg gaagtgtcag tgcgcattca gcaggctgac gacagtaaaa
    33181 gtgaaataca ggaggcgatc ttctgcggat tatggcgggt gcgcagacgt cgcggcgaaa
    33241 agttgctgga ggacaaactg gaggctggct gcgcgccgct ggcgttgtgg caggcggcaa
    33301 cgcaaaatct cttgccgaca gattcgctgt taccgccgcc cattgatggc ctgatgaatg
    33361 gcctaccgtt ggcgcatgag ttactggcac atgtacgtaa ccccgacgcg cagccgcaca
    33421 gcattaatct gacgcaatta cccatcagcg aggctgatcg gctttttctc tcacgtctct
    33481 gtgggccggg aaatattcag attcgtacca ttggctatgg cgagagctat atcaacgcca
    33541 cggggttacg ccatgtctgg catttacgct gtacggacac cttaaaaggc ccgttactgg
    33601 aaagttatga aatctgccca ataccggaag tggtgctggc agcgccagaa gatttggtcg
    33661 actctgcgca gcggcttagc gaggtatgtc agtggctggc ggaagctgca ccgacgtaaa
    33721 aagacggtaa gtatcgcttt cagtcttatg aatatcgcaa tcggcgaata cctctggtcg
    33781 tagagtttca ggataaagag ggagatctaa cattatcggg ttatttttct ctcttcgcct
    33841 acaggagtgc gcatgtggga tgtcattgat ttatcgcgct ggcagtttgc tctgaccgcg
    33901 ctgtatcact ttttatttgt accccttacc ctggggctga tttttttgct ggctatcatg
    33961 gaaaccattt acgtggtcac cggcaaaaca atctaccgcg atatgacgcg cttctggggt
    34021 aagctcttcg gtatcaattt tgctcttggc gtggctaccg gcctgaccat ggagtttcag
    34081 tttggtacta actgggcatt ctattccaac tatgtgggcg atatttttgg cgcaccgctg
    34141 gcgatggaag cattaatggc cttcttcctc gaatccacct ttgtcgggct tttcttcttc
    34201 ggctggcagc ggctgaataa ataccagcac ctgctggtga cgtggctggt ggcgttcggt
    34261 tcaaatctct ctgcattgtg gatattgaat gccaacggtt ggatgcaata cccgaccggt
    34321 gcgcattttg atatcgacac cctacgtatg gagatgacca gcttcagcga gctggtcttt
    34381 aacccggtca gccaggtgaa atttgtgcac accgtaatgg cgggctacgt gaccggggcc
    34441 atgtttatta tggcgatcag cgcctggtat ttactgcgcg gacgggagcg cgatgttgca
    34501 ttacgctcgt ttgccatcgg ttccgtcttc ggtactctgg cgattatcgg cacgctacaa
    34561 ctcggggaca gttctgcgta tgaagtcgcg caagtacaac cggtaaaact ggcggcgatg
    34621 gaaggggagt ggcaaacgga acctgctcct gcaccgttcc atgtggttgc ctggccggaa
    34681 caggatcaag agcgtaacgc ctttgccatc aaaattcccg cgctgttagg gatcctcgcc
    34741 actcactcat tagataaacc cgtgccgggt ctgaagaatt tgatggctga aacctaccca
    34801 cgcttgcaac gcggacgtat ggcctggctg ttaatgcagg aaatatcgca aggcaatcgt
    34861 gagccgcatg tgttgcaggc attccgggaa ctggaaggtg acctgggcta cggcatgttg
    34921 ctctcccgct atgcgccgga tatgaatcat gtcacagccg cacagtacca ggcggcgatg
    34981 cgtggcgcga tacctcaggt tgcgccggta ttctggagtt tccgcatcat ggtgggctgt
    35041 ggttccctgc tgctactggt gatgctgatt gcgcttgtcc agacgctgcg tggcaaaatc
    35101 gaccagcatc gctgggtgct gaaaatggcg ctctggagtt tgccgttgcc gtggattgcg
    35161 attgaagccg ggtggtttat gaccgagttt ggtcgtcagc cgtgggcgat acaggacatc
    35221 ttaccgacat actccgcgca ctccgcttta accacaggac aactggcttt ctcactgatc
    35281 atgatcgtag ggctttacac cctgttctta atcgccgaag tctacctgat gcagaaatat
    35341 gcccgtctgg ggccgagcgc gatgcagagt gaacaaccga cgcagcaaca ggggtaaagg
    35401 agaaaatcat gtttgattat gaaacattgc gcttcatctg gtggctgctg attggcgtga
    35461 tcctggtggt ctttatgatc tccgacggat ttgacatggg gatcggctgt ctgctgccgc
    35521 tggtggcgcg taatgatgat gaacgccgga tagtgataaa cagcgttggt gcacactggg
    35581 aaggcaacca ggtctggttg atcctcgctg gtggggcatt atttgccgcc tggcccagag
    35641 tgtatgcagc ggcgttttcc ggcttttatg tggcgatgat cctggtgctg tgctcactgt
    35701 tcttccgccc gctggccttt gattatcgcg gaaaaatcgc cgatgcacgc tggcgtaaaa
    35761 tgtgggacgc cggtctggtc atcggcagtc tggtgccgcc ggtagtcttc ggtatcgcct
    35821 tcggcaactt gttgctcggc gtgccgtttg ccttcacacc gcaattacgc gtggagtatc
    35881 tcggcagctt ctggcaactg ctgacgccat tccctttatt gtgcggattg ctcagccttg
    35941 ggatggtaat tttgcaaggt ggcgtctggt tacaactgaa aactgttggt gtgattcatc
    36001 tgagttcaca gctggccacc aaacgcgctg cactgttggt gatgctgtgc tttttgctgg
    36061 cgggttactg gctgtgggtc ggtattgatg gctttgtact gctcgcccag gatgctaacg
    36121 gtccttccaa tccgttaatg aaactggtgg cagtgctacc tggtgcctgg atgaataatt
    36181 tcgtcgaatc gcccgttttg tggatcttcc cgctgctggg gttcttctgc ccattgctga
    36241 cggtgatggc gatttatcgt ggtcgcccag gttggggatt tttaatggcg tcattgatgc
    36301 aatttggcgt gattttcacg gcaggcatca cgctgttccc cttcgtcatg ccgtcaagcg
    36361 tgagtccgat ctccagcctg acgttgtggg acagcacttc cagccagctg acgctgagca
    36421 ttatgttggt aatcgtgctg atatttttgc ccattgtgtt gctctacact ctctggagct
    36481 actacaaaat gtgggggcgc atgacaacag aaactctccg ccgtaacgaa aacgagttgt
    36541 actaaggagc aggaacaatg tggtatttac tttggttcgt cggcattttg ttgatgtgtt
    36601 cgctctccac ccttgtgttg gtatggctgg acccgcgtct gaaaagttaa cgaacgtagg
    36661 cctgatgcgg cgcattagca tcgcatcagg caatcaataa tgtcagatat gaaaagcgga
    36721 aacatatcga tgaaagcgat cttaatccca tttttatctc ttctgattcc gttaacctcg
    36781 caatctgcat tcgctcagag tgagccggag ctgaagctgg aaagtgtggt gattgtcagt
    36841 cgtcatggtg tgcgtgctcc aaccaaggcc acgcaactga tgcaggatgt caccccagac
    36901 gcatggccaa cctggccggt aaaactgggt tggctgacac cgcgcggtgg tgagctaatc
    36961 gcctatttcg gacattacca acgccagcgt ctggtggccg acggattgct ggcaaaaaag
    37021 ggctgtccgc agcctggtca ggtcgcgatt attgctgatg tcgacgagcg tacccgtaaa
    37081 acaggcgaag ccttcgccgc cgggctggca cctgactgtg caataaccgt acatacccag
    37141 gcagatacgt ccagtcccga tccgttattt aatcctctaa aaactggcgt ttgccaactg
    37201 gataatgtga acgtgactga cgcgatcctc agcagggcag gagggtcaat tgctgacttt
    37261 accgggcatc ggcaaacggc gtttcgcgaa ctggaacggg tgcttaattt tccgcaatca
    37321 aacttgtgcc ttaaacgtga gaaacaggac gaaagctgtt cattaacgca ggcattacca
    37381 tcggaactca aggtgagcgc cgacaatgtc tcattaaccg gtgcggtaag cctcgcatca
    37441 atgctgacgg agatatttct cctgcaacaa gcacagggaa tgccagagcc ggggtgggga
    37501 aggatcaccg attcacacca gtggaacacc ttgctaagtt tgcataacgc gcaattttat
    37561 ttgctacaac gcacgccaga ggttgcccgc agccgcgcca ccccgttatt ggatttgatc
    37621 atggcagcgt tgacgcccca tccaccgcaa aaacaggcgt atggtgtgac attacccact
    37681 tcagtactgt ttattgccgg acacgatact aatctggcaa atctcggcgg cgcactggag
    37741 ctcaactgga cgcttcccgg tcagccggat aacacgccgc caggtggtga actggtgttt
    37801 gaacgctggc gtcggctaag cgataacagc cagtggattc aggtttcgct ggtcttccag
    37861 actttacagc agatgcgtga taaaacgccg ctgtcattaa atacgccgcc cggagaggtg
    37921 aaactgaccc tggcaggatg tgaagagcga aatgcgcagg gcatgtgttc gttggcaggt
    37981 tttacgcaaa tcgtgaatga agcacgcata ccggcgtgca gtttgtaatg cataaaaaag
    38041 agcattcagt tacctgaatg ctctgaggct gatgacaaac gaagaactgt ctaatgcgta
    38101 gaccggaaaa ggcgttcacg ccgcatccgg ccactttcag ttttactctt tctcggagta
    38161 actataaccg taatagttat agccgtaact gtaagcggtg ctggcgcgtt taatcacacc
    38221 attgaggata gcgcctttaa tattgacgcc tgcctgttcc agacgctgca ttgacaaact
    38281 cacctctttg gcggtgttca agccaaaacg cgcaaccagc aggctggtgc caacagaacg
    38341 ccccacgacc gcggcatcac tcaccgccag catcggcggc gtatcgacaa tcaccagatc
    38401 gtaatggtcg ttcgcccatt ccagtaattg acgcatccga tcgcgcatca gcagttcaga
    38461 cgggttaggt ggcacctgac cgcgagtaat cacatcaaag cctcctttgc caaaatgctg
    38521 gatcactttg ttgagctcat ctttacctgc cagatattcc gacaagccat gttcattact
    38581 cacggtaaac aggttatgcg aataaccacg gcgtaagtcg gcatcaataa ataacacttt
    38641 ttgatcggac tgggcgatca ccgctgccag agttgaactg acaaacgttt taccactgtc
    38701 tggcgtcgca ccggtgatca tcagaatgtt attctccgtc tccatcatag cgaagtgcag
    38761 actggttcgt agcgcacgta cggcttccac agcagaatcc gccgggttat ccaccgccag
    38821 gaaggggata tttttagtac gatggcgctg ctgattagaa aataaatttt tcttacgcag
    38881 acgggtacgt ttatccagcc actcggacat tgggatagtg gcataaacgc tgatgccgtg
    38941 ctcttccagt tgttccgggg cttctacacc acgacgcaac atcgcacgcg ccagcacggc
    39001 acccaccgaa ataaacaggc caagaataaa accaagcacc acgttcaacg cttttttcgg
    39061 tttcactggc tgcggctgag tgactgctgg gtcgataatc cgcacgttac caatggcact
    39121 ggatttcgaa atactcaact cctgctggcg gttaagtaat tgcagatata ccgcacggcc
    39181 cgcttctacg tcacggctta aacgtaacac ttcctgttga gtggaaggca ttgccgatac
    39241 ccgcttattc aggcgtttgc gttcttgctc cagcgtctgg cgtttttcca gcagcgcacg
    39301 ataagttggg tgatctttct tatacagctg ggagatctct gcctcgcgga aagtcagctc
    39361 attgagttga ttatcaacgt tcacaatctg ctcaagaacg gctttggctt ctaggttaag
    39421 gtcaaccgaa tcgcgctgct ggcgataaac gttgagtttt tcttccgcct ggtccagctc
    39481 gctgcgcact tcaggcaact ggcgctgtaa gaattcaagg ctttgtgaat cctgcgccgc
    39541 ctggcgagcg atattctgtt gcaaatagtt gttagcgatg ctgttcagaa tacgagtaat
    39601 caactgggga tcatcaccag tcatggtaag ttccagcatc ccgctttctt tactgcgttc
    39661 gctaacggta aaggtttcct gcaatgcgtt aatcgcttcc agttcggtac gctggctcag
    39721 gacaaactgt gttcctggtt tggccttaat gtccgcgata gtcagcgcaa cgccatcttt
    39781 ttccagacgc tggccgacca taccattgac ggtgaactct tcaccttcca gtgtatagtg
    39841 gccgttttcc ccaaccgtga gtgtcagttg ctgatcctga ccattcagtt gtggaatatg
    39901 catccagctg atcgccagct cacctggttt ttctttggtt aatctcgccc agccgcgacc
    39961 cacaatcgga aaatacttct gctcaactat gtcgtgcaga ttcagttcag caatggtttt
    40021 accgagaatc atgcgcgatt gcagcagttg gatctccggt gcagactcgg gcgatgagtt
    40081 agggatcata tcgctcaggc cgctgagaat ggcgttgccc tgtttttgct caacctggac
    40141 cagagtatct gcctgataaa ttggtgtgct taacagcgag taagcgacag cgatcagcgt
    40201 gaataacgcg gttacgctga taataaactt acggtgatcc cataactcgc cgaccagacg
    40261 aagcagatcg atctcatttt cctgagtgct gcctggtggc gtattcatat ttttagttgt
    40321 catcgtattt tataaactca aattaccggc tgaggcgctt cgcccattcc tgactggcgc
    40381 gctccaacat accgtagaca tgttcaaatg cgtcctgact tttacgatag ggatccggga
    40441 tctctttctg ttccagccat tgcccaaaca gcattgtctt cccgcggacc tcgggagcga
    40501 ttgcggtaac ctgagcaata tgctctgact ccattgccag aatcagatcg taatttcgtg
    40561 ccatctcagc agtgagctta cgtccggcat gtccttcaag agatacgcca tgattagcgg
    40621 caacatctgc tgctgtcgca tctgcagggt gttttaccag accatgaaca cctgccgatt
    40681 tgacttttac gcctggcaga cgtttacgca gcaagcgctc gccaatgggc gaacggcaaa
    40741 tgttgccggt acaaaccacc aggattgagt taaattttag ttgggccatg tttgaatcca
    40801 ccgtgaagtc tctgtcaggt catgcacccc ggaaatcgtc ggtaccagca gagaaatcac
    40861 acggttccaa cgagccagcg gcgcggtagt gacataaaca atgtcgtaag gttcaagctg
    40921 gaattccgtt ccgagtatca ttgccgatgc gtccttcgca ttcagctgat aaatattggc
    40981 gattttgcca ttctgcttgt tttgcgttgc acgaataaca aaaatccccg tcgcatcagc
    41041 gacatcctga ttcataccct cagcgttacc cagcgcttcc gccagggtca taccgctgcg
    41101 gtccattttc agcgtgctct gtttacccac ttcacccatc acgaagactt tcagatcatc
    41161 gttgcgcgga ataaataaaa tatcgcccgg gtgcagcagt ttgttctggc gcaagtcgcc
    41221 acgctgcatc agcgcataga ggttcacttt ggtctttacg ccattctggg tgagcaccac
    41281 gttgcgccag tctgcatctg cggtcagacc gcccgcggcg ttaatcgcat ccatgatggt
    41341 cagaggaata ttggtaatcg gctgctgacc cgatttgctg acttcgccgg tgacgtacgc
    41401 tttttgcgat cggaacgccg cgacgctgac atcgacttgc gggctttcaa tgactgaatc
    41461 gagacgcgct gtaatctcgt tgcgtacctg ggtaagtgtt ttcccggcca ctttcaggcg
    41521 accaatatag gggtagaaaa tcgcaccatc ggcgttaacc cagttgccgg tatcactggc
    41581 gctacggtat tgccctgcgg gggtggttag ttccgggtga tcccagaccg taaccatcaa
    41641 cacatcacca atcccgatac gatattcata gtttgcgatt tgctgctcca gctccgggtt
    41701 agcctgcgac ataatcggtt tggcgcgcaa ctgatcaatc aatcctggcg tgacgggata
    41761 gatattgacc attttgtcca ggtcatactg attgtcaggt agttcaatga catccttgtt
    41821 cctggtcgat aaattctgac caggaacaag ggtacatgct gtcaaagaca gaacagccaa
    41881 tgtcagtacc gaaaacttaa aaatgttctt tttcattggt ttatatttat cagtcaatgt
    41941 aatgttatga attacgtcag gttattgtcc aaccggtact tctcgctctg ccgtcattgg
    42001 atagagctgg tatttgcgtg acagcatttg tccaccatca cgcgtcaatg gtgtccacga
    42061 aaccaccgcg cggttgcggt taggtccaat ggtcatcaag tcgaatggaa tcgagatata
    42121 aaaaccttta ctaaagccgc cttcgccgta gtcatcttta gatacgttac tgattgccgc
    42181 ccatacccct accgccacgc cgctgtcaaa gcgtttggcg acgtcgatcg ttgctccttt
    42241 atcttttgcc agatattgcc caacgctaag tttcatcagt acgccattga gcgtcggcgg
    42301 gttccagtaa gccgtcacga aaccagttgg cgtggaataa tcggtgaagc gcatcatgtt
    42361 gtcccagtca cgttgcttca cgtagttaac gtccacaccc agcgcccagc tggcatctag
    42421 cgggcgataa agcagctcgg aaccgacacc ggcgtacatc gtttccagat aaccgccata
    42481 cacctggcca tagaaaccat tgcctaagtc ggcaaagtag ttcgcctgca agttgttgag
    42541 ataaacgtca ttgcgaacgt aatcacggat atgcgtgcgc acgcggggca gggtagagtc
    42601 cgcgggcaac agcgaagact taaacttgtc gtagttgttg taaatattgg tgaaaatacc
    42661 gccatcaagc agcaggtggt cggtaaacca gtagcgggca ctggacatca gccccagctg
    42721 gaacatatag aaatcttccg ggccgcccag cgactgtgaa agtgttgggt tgaaagagta
    42781 gctaaagcga tcttcacgaa tacggtagcc ccgaccaaag gcagaaagat cttctgcttc
    42841 aacacgttgt tgttgaagtt gctctgattg accaggcgct gtaccagcca gctgtttgcg
    42901 caggctggct acgtcggttt cggtagtcac catcgccata tgctcgcgct tttgcgtcac
    42961 gctaatcttc tcaacgcctt gcggcaggtt attcaccaga atccggttgg cacgatcgac
    43021 cgcttcgcga gaatcacggt atttgtattg ttgaccagac atatacagcg tcttatcgcg
    43081 cagctgaatt tccggtgctt caaaacctgc gttgtacttc agcgcggtaa gttggttcgc
    43141 tactgtggtg tactgcaatc cttcagattc aggcgcaggt tgatatgccg gttttggcgt
    43201 atcgcgcagg gcagggcgca gatcgttgaa attggtccgt aacgtgaagc caaacatcaa
    43261 cgtgttaccg cgttcataac tcaggttgag atctgcccag ctggcagcgc gataaactgc
    43321 gccgacgttg aaatggcttg cctgaggcag tttgccagcg aaatcattct ggtaattgtt
    43381 gccatcgtat tcgagtttca gacgcagggg attccacggc gtttgatact caatgccgcc
    43441 aaagatggaa gccgggccac gaaagatatc gctaaagctg atatcgcccg catcgtgaga
    43501 ctctgcgcga tgacaatatt tatcgttcac ccggcaaaac gggttggtaa tattgcccgc
    43561 attaccggcg tagccccatg ccatcccgag ggtgaaatca aatggccccg cttgcttgct
    43621 ggccaccaga tactcaccgt caaacagacc cgtaccagca atatcacgtt taccaaacgc
    43681 cacttgcggt agccagtaac cttcttccca caggcgaagt ttaaaatcga atgatttgtc
    43741 tttgtatgac tgatcgccgc tgaaatcttc ccactggcta tatttgcgtg tgcgcacatc
    43801 cgtataacga atggtgcctt ccagccatgg gaacagcgcc acggaggtgg agtagaaccg
    43861 gtattgatcg ttatcccggt agttgacgct gaattcacct tccggtgcga tgcgcgcatt
    43921 tggcatctgc aacaatcctg tgccgccaaa gtctgattgc gacgaaccca gcggatccgg
    43981 gtaggttaat acttcagcat gacaggcact ggagacggca atggccaggc agcttaaaag
    44041 ataagaattc ttcttcatca gtcaggaaca cgttgcgtta aaacagacac aatctggtca
    44101 tttaaatcag catatttttc gggcagtaca tgcgcagaaa agcccaacca aagctggctg
    44161 ccaggcggtg gttccacatg tcttttattc cacagggcaa caggggcgac gacagtctca
    44221 ccctcaggcg taatcaccat aacgttattc ttgtccgcgc ctgcaaggcg ggggtgatct
    44281 tgcagataat cggtaacgct acggcctgcc tgccagggca attgcccggc cccagaaacc
    44341 gcacccagca gagtaatagt caccggacgc tgtacggtat agagcgtata gtccccgacc
    44401 aacgggggat tgctgttctc atccactcga acaaaatcag ggtccagttt gaccggtaag
    44461 cgaccagtga tattgagatt gagtaactgc tggcgcacag atttaatcgt tgccgccaca
    44521 tcgtcgtcag cttctgcttc ccaggaagca agctgtgcca tgacatgttg gtagtcttta
    44581 agcgctttag ctttcgccgc agagtcggtc agcaaggcac caggccacca gaggcgatcg
    44641 cgcagttgcg gttgtgtcac caactggaca acattttcca tggggccaac ggaaagtgtc
    44701 tgttgttcgc caggcagata aatagtcacc gttccttgcg caaaggcatg gggtgtcatt
    44761 acgtaaagta cgctggcaat gaaatacgac tgtaatttat tcatggtgcg ggtttaagaa
    44821 acgtcatttc tacgggaata acccctgcgc ctaacatttg ccgactttga cgaacctggc
    44881 cagtagccga atcgacccag aatgtgtttt gccactgttt ttctggccgc gtggaagtca
    44941 cctcttcctg ccagacatta cacagcacat tgcgacccgc aatattcagc gtctctaatc
    45001 cagcaaagga aaaagtagaa ctcagggtcg cagagcgaaa atggttgtct tcactccaga
    45061 gaatatcgcg cgtccagcgg ctgccatctt ttattgccag cgcgttacgc agagggtcct
    45121 gcccggaatt tgtcacttcc agcagattat tattaagttt gacggttttt aaaagacgtc
    45181 cattgtgggt aaccagcatg gcgttatcct gggataacca tttgctttgt tcttgttcta
    45241 tatatcccag taccacaaag attcgttgcc cttcattaag gcgtaaatac atcgtggaat
    45301 aaggcaacgc ctggatctgc tgatccgcta cggtgatatc ctgattatcg aaaaggctgg
    45361 cgcgaaatgt atcgaccata ctttgctggc tgtgcgtaca tcccgcaaga aatagtgcga
    45421 aaatcgataa aataagaggg cgcaccttta atccttgaaa ggttaattaa aaaaatgcaa
    45481 atctttaaag cccggtacga atatcgcaac cgggtatcat ttaactttaa tttcgacgcg
    45541 ttaaagcagt attagcgtgt agtggacgtg gtggttgagg tgttatgaga accgccatcg
    45601 ccactgtcat ttgctgcaac aactgccaac gtcgccacac caacagccgt tgccacaccg
    45661 acaactgtcg ccgtgccgac agcgccagca gccacgccac cagtggtagt agcagtcgtg
    45721 gttgcgccgg tagtggtcgt tgtggtgcca gtagtacccg tcgttgcctc ggtcccgttt
    45781 gttgcttcag gggcagcaaa cgcagctggc gtcgtcaaca tgaaggccat aaggattgca
    45841 gaaagcttgt gtttcataac ttttccttta ttcatcgcat ggacaatacg tacgcttgag
    45901 atcaggattg tctactttga gtataacatc cttgtgaaat ctccctttcc tcataccgct
    45961 tgcactatat actgcgggta ggaaaggcgc gcagagggaa atataagatt gttaactatc
    46021 cccctctgga aatacgactt gtgagcataa gataaatctt agcaaaatac aaattaaaga
    46081 taaggaaatt gttacgaaag ctattaatta ttgctggtaa tatagtttca agtggtacta
    46141 taactggctg ttaaatggca tttataacta ttaggtgcag agatattcgc ttaaatggat
    46201 tagtttcttt gtggaaaagt aacttatgtt ataatatatg atgttgacta ttgcactatt
    46261 ccaataaaac cagtcagctt taaacaagca gcgtcatatt aagagagata aacatttgcc
    46321 gctgttggtc ctcgcaggcc atttacgcgg caaaattcca cacgtaatcc tggtataagc
    46381 acttctgcgt cgcggggagt gaatgcggaa atatggacct gaacttcttt acgaccgtcg
    46441 gaggggataa tgaatccttt gccgcttttg cgatcaaagg ttttgacaat tcctgtcatt
    46501 ttacgggaca aacaaattcc ttactgaaaa tactgcgctg cactatacgg ggttaataaa
    46561 ataaagccag cgatatttaa gaccgccgga cggctaaaat aaaatttgct taatctcaat
    46621 tatcatgcgt taatagctgc gtcggtttga aagacagaca gcatacaaag tagtttacta
    46681 aagcagttct cattatcagg cattatcccc ttcttttgag tctctctcct gaacactaag
    46741 tagtttctgt attaaagccc tgtttgccga aaggcccaaa atgaaggaag taaaatatgt
    46801 ctaataaaat gactggttta gtaaaatggt ttaacgcaga taaaggtttt ggctttatca
    46861 ctcctgatga tggcagcaaa gacgttttcg tccatttcac tgccatccag agcaatgaat
    46921 tccgcacgct gaacgaaaat cagaaagttg aattttctat tgagcagggg caacgtggcc
    46981 ccgcggcagc gaacgttgtt acgctctaag gttgccgtta ttactcaaca tctccatttc
    47041 cgctgtccat gttgtcatgg ttcacagtac cgcacatcgg cattcgatgt gacggagcga
    47101 aatcctttgg gcgctaagtg tattttttgt aaatcgacga tgatcacctt tgataacgtc
    47161 acgctgcaaa tacgcactga ccatgcgccg ctggatttca caaaataata tcaggctccc
    47221 tcg
//
LOCUS       DADKRT010000006        46941 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.006, whole genome shotgun sequence.
ACCESSION   DADKRT010000006 DADKRT010000000
VERSION     DADKRT010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 46941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46941
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.006"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..94
                     /locus_tag="JQ356_000317"
     CDS             <1..94
                     /locus_tag="JQ356_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4620514.1"
                     /translation="LNAVLDYIDAVAATDTSTAPDVIWPELPEA"
     gene            complement(66..503)
                     /locus_tag="JQ356_000318"
     CDS             complement(66..503)
                     /locus_tag="JQ356_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4620515.1"
                     /translation="MFYSPSLNIFVNPALKDDYINANSWPDDALAVSDDVYNEFAINT
                     PPDDKIRVAGKNGLPTWALIPPPSYEELIQQAESERQLLLNQANEYMNSKQWPGKAAI
                     GRLKGEELAQYNLWLDYLDALELIDTSSAPDIEWPTPPAVQAR"
     gene            complement(505..891)
                     /locus_tag="JQ356_000319"
     CDS             complement(505..891)
                     /locus_tag="JQ356_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001537786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4620516.1"
                     /translation="MPVSHYLCIFLNVGLGELSLAGTASGVIGLNGYVTIPLIISGSR
                     RTLIIQWGQARFGGSGGEDAGYLNDFPFAFPSACYGMIVSHVGHTPSGAGILSASAIT
                     SNQFRGFSSIATAANAVLGRYIAIGV"
     gene            922..1488
                     /locus_tag="JQ356_000320"
     CDS             922..1488
                     /locus_tag="JQ356_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016529756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY4620517.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKPDRPG
                     LKKLLRTLSAGDTLVVWKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSIDTSTPMGR
                     FFFHVMGALAEMERELIVERTRAGLAAARAKGRVGGRRPKLTTEQWAQIGRLLEAGES
                     RQRIALIFDVGVSTIYRKFPANESNESP"
     gene            1631..2803
                     /locus_tag="JQ356_000321"
     CDS             1631..2803
                     /locus_tag="JQ356_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HAY4620518.1"
                     /translation="MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFP
                     LNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIG
                     AVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY
                     GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTG
                     WHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDITTLIRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA"
     gene            2813..3328
                     /locus_tag="JQ356_000322"
     CDS             2813..3328
                     /locus_tag="JQ356_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HAY4620519.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMP
                     GAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
                     LMEAHRNALGL"
     gene            3383..3685
                     /locus_tag="JQ356_000323"
     CDS             3383..3685
                     /locus_tag="JQ356_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HAY4620520.1"
                     /translation="MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA"
     gene            3700..3819
                     /locus_tag="JQ356_000324"
     CDS             3700..3819
                     /locus_tag="JQ356_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY4620521.1"
                     /translation="MADIATIFHWPPSVTDVMPLTEVLEWRDKAIQRSGASHE"
     gene            3812..6889
                     /locus_tag="JQ356_000325"
     CDS             3812..6889
                     /locus_tag="JQ356_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY4620522.1"
                     /translation="MSDNNLRLQVILNAVDKLTRPFRSAQASSRELAAAVKKSRDAIK
                     QLDQAGSSLDSFRKLQAENQKLGDRLNYARQRANLLSQELGAMGPPSQRQVVALGRQR
                     LAVQRLEERQKKLQQQTALVRAELYRAGISANDGASATARITRETMRYNRQLSEQEAR
                     LRRVGEQQRKMHAARGAYARRLEVRDRIAGAGATTTAAGLAMGAPVMAAVKSYTSMED
                     AMKGVAKQVNGLRDDNGNRTARFYEMQGAIKAASEQLPMENGAVDFAALVEGGARMNV
                     ANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGD
                     ALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANA
                     MVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLS
                     AMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLV
                     KTGAQNTFSSLGETLRQPLMDILYTVKSVTGALRRWVEANPELTGTLMKVAAVVAAVT
                     VGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTATVTRTSNALSWLAGAPLALLR
                     RGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMN
                     PLAVLRGGLAATGTVLRMLASGPLAMLRVALYAVSGLLGALLSLIGLVVTALAGVALV
                     VWKYWQPITAFLGGVVEGFKAAAGPVSAAFEPLKPVFQWIGDKVQALWGWFTDLLTPV
                     KSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKL
                     PESVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPRGQFGIVGENGPEIV
                     NGPANVTSRRNTAALAAVVAGMMGVAATPAELPPLHPLALPAKGGEAMVSRAATVPPV
                     QRIEAPMQIIIQTQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQGGYDA"
     gene            6886..7371
                     /locus_tag="JQ356_000326"
     CDS             6886..7371
                     /locus_tag="JQ356_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4620523.1"
                     /translation="MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLG
                     PDNDMLTLSGVLMPEVTGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTK
                     TEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQGTATSALSDISKTVGGLL
                     S"
     gene            7368..8468
                     /locus_tag="JQ356_000327"
     CDS             7368..8468
                     /locus_tag="JQ356_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HAY4620524.1"
                     /translation="MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRG
                     FEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLT
                     IRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKLVEHIDQTN
                     ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTL
                     ADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVL
                     NRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPLDDAE
                     WTITTLTHTVSPDNGFTTSLELEVRIDDFEME"
     gene            8559..8777
                     /locus_tag="JQ356_000328"
     CDS             8559..8777
                     /locus_tag="JQ356_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504085.1"
                     /note="in E. coli K-12 this is in prophage P2 remnant;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY4620525.1"
                     /translation="MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHET
                     FVRSIATPKESNPVQPHPMKSGQVALSL"
     gene            complement(9012..10697)
                     /locus_tag="JQ356_000329"
     CDS             complement(9012..10697)
                     /locus_tag="JQ356_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HAY4620526.1"
                     /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
                     GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
                     VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
     gene            10967..11344
                     /locus_tag="JQ356_000330"
     CDS             10967..11344
                     /locus_tag="JQ356_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620527.1"
                     /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
                     FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
                     CALGALCFLFISSLFKPQHRKNQ"
     gene            complement(11374..11631)
                     /gene="grxA"
                     /locus_tag="JQ356_000331"
     CDS             complement(11374..11631)
                     /gene="grxA"
                     /locus_tag="JQ356_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 1"
                     /protein_id="HAY4620528.1"
                     /translation="MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
                     KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
     gene            11791..12078
                     /locus_tag="JQ356_000332"
     CDS             11791..12078
                     /locus_tag="JQ356_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1418 family protein"
                     /protein_id="HAY4620529.1"
                     /translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
                     QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH"
     gene            12062..12784
                     /gene="nfsA"
                     /locus_tag="JQ356_000333"
     CDS             12062..12784
                     /gene="nfsA"
                     /locus_tag="JQ356_000333"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HAY4620530.1"
                     /translation="MTPTIELICGHRSIRHFTDEPISEAQCEAIINSARATSSSSFLQ
                     CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMAQNALTAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP
                     ADNPDLKPRLPASILVHENSYQPLDKDALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR
                     TIIKESRPFILDYLHKQGWATR"
     gene            12845..13747
                     /gene="rimK"
                     /locus_tag="JQ356_000334"
     CDS             12845..13747
                     /gene="rimK"
                     /locus_tag="JQ356_000334"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HAY4620531.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
                     SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG
                     AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
                     DIAGKMIRWIERYATTEYCLKTGG"
     gene            13835..14311
                     /locus_tag="JQ356_000335"
     CDS             13835..14311
                     /locus_tag="JQ356_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HAY4620532.1"
                     /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
                     DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
     gene            14662..15774
                     /gene="potF"
                     /locus_tag="JQ356_000336"
     CDS             14662..15774
                     /gene="potF"
                     /locus_tag="JQ356_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HAY4620533.1"
                     /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
                     DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG
                     IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
     gene            15869..17002
                     /gene="potG"
                     /locus_tag="JQ356_000337"
     CDS             15869..17002
                     /gene="potG"
                     /locus_tag="JQ356_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
                     /protein_id="HAY4620534.1"
                     /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK
                     GEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL
                     FPHMTVEQNIAFGLKQDKLPKAEIASRVHEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
                     ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG
                     RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERHEDGLVLYSPGLV
                     HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV
                     RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV"
     gene            17012..17965
                     /gene="potH"
                     /locus_tag="JQ356_000338"
     CDS             17012..17965
                     /gene="potH"
                     /locus_tag="JQ356_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HAY4620535.1"
                     /translation="MNTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
                     LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
                     NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA
                     LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
                     EFFNNRDWPVAAAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            17962..18807
                     /gene="potI"
                     /locus_tag="JQ356_000339"
     CDS             17962..18807
                     /gene="potI"
                     /locus_tag="JQ356_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HAY4620536.1"
                     /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
                     AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
                     SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
                     RARHG"
     gene            18867..19355
                     /locus_tag="JQ356_000340"
     CDS             18867..19355
                     /locus_tag="JQ356_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HAY4620537.1"
                     /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
                     NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
                     TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
                     LQ"
     gene            19396..20553
                     /gene="rlmC"
                     /locus_tag="JQ356_000341"
     CDS             19396..20553
                     /gene="rlmC"
                     /locus_tag="JQ356_000341"
                     /EC_number="2.1.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HAY4620538.1"
                     /translation="MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEW
                     CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
                     PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQE
                     QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA
                     SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAA
                     ELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
                     NAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQSEAAGAASDC"
     gene            complement(20697..21428)
                     /gene="artJ"
                     /locus_tag="JQ356_000342"
     CDS             complement(20697..21428)
                     /gene="artJ"
                     /locus_tag="JQ356_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4620539.1"
                     /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
                     GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
                     PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKINDQWFPQ"
     gene            complement(21719..22387)
                     /gene="artM"
                     /locus_tag="JQ356_000343"
     CDS             complement(21719..22387)
                     /gene="artM"
                     /locus_tag="JQ356_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HAY4620540.1"
                     /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
                     VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            complement(22387..23103)
                     /gene="artQ"
                     /locus_tag="JQ356_000344"
     CDS             complement(22387..23103)
                     /gene="artQ"
                     /locus_tag="JQ356_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HAY4620541.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVA
                     WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
                     SQYILKRIDLRATRFERRPS"
     gene            complement(23110..23841)
                     /gene="artJ"
                     /locus_tag="JQ356_000345"
     CDS             complement(23110..23841)
                     /gene="artJ"
                     /locus_tag="JQ356_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4620542.1"
                     /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV
                     GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYNSYQNAK
                     LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KLNTALEKVKKDGTYETIYNKWFQK"
     gene            complement(23859..24587)
                     /gene="artP"
                     /locus_tag="JQ356_000346"
     CDS             complement(23859..24587)
                     /gene="artP"
                     /locus_tag="JQ356_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HAY4620543.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
                     LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
                     IVEQGDASCFTEPQTEAFKNYLSH"
     gene            complement(24805..25320)
                     /locus_tag="JQ356_000347"
     CDS             complement(24805..25320)
                     /locus_tag="JQ356_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY4620544.1"
                     /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPGNV
                     AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPES
                     ARVASASTIPNRDARNIPLRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
                     AGTLRQSIENR"
     gene            25446..25769
                     /locus_tag="JQ356_000348"
     CDS             25446..25769
                     /locus_tag="JQ356_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HAY4620545.1"
                     /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
                     VKTRR"
     gene            25766..26596
                     /locus_tag="JQ356_000349"
     CDS             25766..26596
                     /locus_tag="JQ356_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HAY4620546.1"
                     /translation="MRRVFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI
                     KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI
                     SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP
                     ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
                     LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD
                     "
     gene            complement(26593..27603)
                     /locus_tag="JQ356_000350"
     CDS             complement(26593..27603)
                     /locus_tag="JQ356_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415389.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY4620547.1"
                     /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG
                     AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMFSQANPQ
                     TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA
                     SQEACDKLPSGRVYNITNGEHRTLCSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER
                     FRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKL
                     PR"
     gene            complement(27702..29132)
                     /locus_tag="JQ356_000351"
     CDS             complement(27702..29132)
                     /locus_tag="JQ356_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY4620548.1"
                     /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL
                     ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP
                     VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
                     DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ
                     FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
                     RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
                     SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD
                     SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL
                     LMIPAHLFIFRGMAKQIARLAEQSTD"
     gene            complement(29143..30144)
                     /gene="ltaE"
                     /locus_tag="JQ356_000352"
     CDS             complement(29143..30144)
                     /gene="ltaE"
                     /locus_tag="JQ356_000352"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HAY4620549.1"
                     /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
                     ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP
                     IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
                     RWRKMAGGGMRQSGILAAAGMYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
                     MLFVRVGEENAAALGEYMKVRNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR"
     gene            complement(30181..31899)
                     /gene="poxB"
                     /locus_tag="JQ356_000353"
     CDS             complement(30181..31899)
                     /gene="poxB"
                     /locus_tag="JQ356_000353"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001532507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HAY4620550.1"
                     /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
                     MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
                     PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
                     GDVALKPAPEGATTHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
                     LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLALLGTQF
                     PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDK
                     ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
                     MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
                     LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD
                     EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
                     KTNWLR"
     gene            complement(32032..33000)
                     /gene="hcr"
                     /locus_tag="JQ356_000354"
     CDS             complement(32032..33000)
                     /gene="hcr"
                     /locus_tag="JQ356_000354"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HAY4620551.1"
                     /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL
                     VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
                     EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVHTPQDVIFADEW
                     RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG
                     VTRFFKEKFFTPVAKAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
                     VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
     gene            complement(33012..34664)
                     /gene="hcp"
                     /locus_tag="JQ356_000355"
                     /gene_synonym="priS"
     CDS             complement(33012..34664)
                     /gene="hcp"
                     /locus_tag="JQ356_000355"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415394.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HAY4620552.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC
                     LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL
                     DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVSAYDDRIWTRS
                     IVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA"
     gene            complement(34808..35707)
                     /gene="lysO"
                     /locus_tag="JQ356_000356"
     CDS             complement(34808..35707)
                     /gene="lysO"
                     /locus_tag="JQ356_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415395.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lysine exporter LysO"
                     /protein_id="HAY4620553.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM
                     GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI
                     AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ
                     IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG
                     PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV
                     PAAIVHGFILSLLVPILIAFFSA"
     gene            complement(36201..36896)
                     /gene="aqpZ"
                     /locus_tag="JQ356_000357"
     CDS             complement(36201..36896)
                     /gene="aqpZ"
                     /locus_tag="JQ356_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HAY4620554.1"
                     /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG
                     LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI
                     ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATAKFAPAG
                     FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII
                     GGLIYRTLLEKRD"
     gene            37322..38980
                     /locus_tag="JQ356_000358"
     CDS             37322..38980
                     /locus_tag="JQ356_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HAY4620555.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
                     CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA
                     KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
                     HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
                     HRSSKPDLAIEVAIEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
     gene            complement(38977..39933)
                     /locus_tag="JQ356_000359"
     CDS             complement(38977..39933)
                     /locus_tag="JQ356_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HAY4620556.1"
                     /translation="MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQ
                     KFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEAL
                     RYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLKLTMMISMDKEGDSTILF
                     RNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVM
                     EAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHY
                     RLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG"
     gene            40084..41199
                     /gene="macA"
                     /locus_tag="JQ356_000360"
     CDS             40084..41199
                     /gene="macA"
                     /locus_tag="JQ356_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308991.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HAY4620557.1"
                     /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
                     DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
                     EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQI
                     GTIDAEIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
                     DMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
                     ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
                     EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
     gene            41196..43142
                     /gene="macB"
                     /locus_tag="JQ356_000361"
     CDS             41196..43142
                     /gene="macB"
                     /locus_tag="JQ356_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HAY4620558.1"
                     /translation="MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASG
                     SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT
                     AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
                     NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHMVIIVTHDPQVAAQAERVIEIRD
                     GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
                     LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
                     DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
                     EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
                     RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
                     GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
                     DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTAT
                     GILFGWLPARNAARLDPVDALVRE"
     gene            complement(43215..43439)
                     /gene="cspD"
                     /locus_tag="JQ356_000362"
     CDS             complement(43215..43439)
                     /gene="cspD"
                     /locus_tag="JQ356_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HAY4620559.1"
                     /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
     gene            43762..44082
                     /gene="clpS"
                     /locus_tag="JQ356_000363"
     CDS             43762..44082
                     /gene="clpS"
                     /locus_tag="JQ356_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HAY4620560.1"
                     /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            44113..46389
                     /gene="clpA"
                     /locus_tag="JQ356_000364"
     CDS             44113..46389
                     /gene="clpA"
                     /locus_tag="JQ356_000364"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HAY4620561.1"
                     /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
                     SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
                     ELTYGFQSAQKHKAEAAH"
BASE COUNT        11414 a        11711 c        12734 g        11082 t
ORIGIN      
        1 acttaacgcc gtgttggatt acattgacgc ggtggcggca acagatacca gcaccgcgcc
       61 ggatgtcatc tggcctgaac tgccggaggc gtaggccatt caatatctgg agcactggag
      121 gtatcaatca gttccagtgc gtccagataa tccagccaca aattatattg cgccagttcc
      181 tcacctttca gacgaccaat agcggcttta ccgggccatt gtttactgtt catgtattcg
      241 ttggcctgat taagcaataa ttgcctttct gattctgcct gttgaataag ttcttcatat
      301 gatggtggag gtattagtgc ccatgtgggt aatccatttt ttcctgcaac acgaattttg
      361 tcatctgggg gcgtattgat tgcaaattca ttataaacat catcactgac agccagagca
      421 tcatctggcc atgaatttgc attaatgtaa tcatccttaa gcgcaggatt cacaaaaatg
      481 tttaaagatg gactataaaa catattaaac ccctatagcg atataacgac ctaatacagc
      541 atttgcagca gtcgctatgc ttgaaaaacc gcggaactga tttgatgtaa ttgcagaagc
      601 cgacaggatt cctgcgcctg aaggtgtatg ccccacatga ctaactatca tcccataaca
      661 tgctgacgga aaggcaaaag gaaaatcatt aagatatcct gcatcttcac caccagaccc
      721 accaaatctc gcctgccccc actgaataat cagtgttctc cgggaacctg aaataattaa
      781 cggaatcgtt acatacccat tcaggccaat gacacccgat gcagtgccag ccagagataa
      841 ttctcccaaa ccaacgttta agaaaatgca gagataatgg ctaactggca tcatccccgg
      901 tttttattca ggggattgat catgcttatt ggctatgtac gcgtgtcaac aaatgaccag
      961 aacaccgatt tgcaacgtaa tgcactgaac tgcgcgggat gtgagcggat ttttgaggat
     1021 aaaatcagtg gcactaagcc cgacagaccg gggcttaaaa aactgctcag gacactatcg
     1081 gcaggagaca cgctggttgt ctggaagctg gacagactgg gacgcagtat gcggcatctt
     1141 gttacgctga tagaagagtt gcgccagcgt ggtgtgaatt tccgaagcct gactgacagt
     1201 attgatacca gtaccccaat gggccgtttc ttttttcacg tcatgggggc tctggctgaa
     1261 atggaacgtg aactgatagt tgaacgtacc agagcagggc tggctgcagc tcgtgccaaa
     1321 ggcagagtag gtggacgccg tcctaagttg accaccgaac agtgggcaca gattggacgt
     1381 ttactcgagg ccggagaatc aagacagcgt attgcactga tttttgatgt gggcgtttct
     1441 accatttata gaaaatttcc ggcgaatgag agcaatgaat cgccctgagt cagtattatt
     1501 ttgatttttc ctgtaagcgg acaaataccg tcattttgtg tgaataacga cacaactgcg
     1561 cttagctgtt tgtcaggcac aatcacttca acatagggcg aagcctaatc caatcaggag
     1621 gttcgccact atggctcagg attaccacca cggggtgcgc gttgttgaag tcaacgaagg
     1681 cacccgatcc attaccacgg tgagcaccgc catcgtgggt atggtctgca cgggcgatga
     1741 tgccgatgca aaaatgtttc ctcttaataa acctgtgctg atcactgatg tgctgaccgc
     1801 cagcggtaaa gcgggtgagt ctggcacgct ggcccgttcg ctggatgcca tcgctgacca
     1861 ggcaaaaccc gtgaccgttg ttgtgcgtgt gccgcagggt gaaacggaag aagaaaccac
     1921 aaccaatatc attggcgcag tgaccgccga gggtaaaaaa acaggtatga aagccctgtt
     1981 atctgcccag tcacagctcg gcgttaaacc gcgcattctc ggcgtgccag gtcacgacac
     2041 gaaggcggta gctactgagt tgctgagcgt ggcgcaaagc ctgcgtggat ttgcttacct
     2101 gtcagcgtat ggttgcaaga cggtgcagga agcaatcact taccgtgaaa acttcagtca
     2161 gcgtgaagga atgctgatct ggcccgactt tactggctgg gacacggtgc tgaatgccga
     2221 agcaacggct tatgccaccg cccgtgcgct cggtctgcgc gctaaaattg atgagcagac
     2281 cggatggcac aaaagcctgt ccaacgtggg cgtgaacggt gtcaccggaa tttctgctga
     2341 tgtgttctgg gatctgcagg acccggcaac cgatgcaggt ctgcttaacc agaacgatat
     2401 caccacgctt atccgcaaag acggtttccg cttctggggt tcccgctgtc tgagcgatga
     2461 tccgctcttt gccttcgaaa actacacccg cacggcgcag gtgctgatgg acacgatggc
     2521 agaagcgcac atgtgggcgg tggacaaacc gctgaacccg tcgctggccc gcgacattat
     2581 cgaaggtatc cgcgccaaaa tgcgtagcct ggtcagtcag ggctatctca ttggtggtga
     2641 ttgctggctg gacgagtcgg tgaacgataa agacacgctg aaagccggga aactcaccat
     2701 cgattacgac tacacgccag tgccgccact tgaaaacctg atgctgcgtc agcgcatcac
     2761 cgatcagtac ctggtgaatt tctccagcca ggtcagcgcg taaggggaca acatggcttt
     2821 accacgcaaa ttaaaacacc tgaacctgtt taacgacggg aacaactggc aggggatcgt
     2881 tgagtcgctg acgctgccga aattcacccg caaatatgag aagtatcgcg gcggcggtat
     2941 gcccggagcg gtggatgtgg atctgggact ggatgacagt gcactggata cagaattttc
     3001 cattggtggt actgaactgc tgctgtttaa gcagatgggc aaagccacgg tggatggcat
     3061 ccagctgcgc tttaccggct ctattcagcg tgatgatacc ggggaagtgc aggccgtgga
     3121 gcttgtggtg cgtggacgtc acaaagaagt agattccggc gagtggaaga cgggcgaaag
     3181 caacactacc aaagtgacca gtaccaacag ctacgcgaag ctgaccatca atggtgaggt
     3241 gctctatgaa gtggacctga tcaacatggt ggaaattgtg gacggtgtgg acctgatgga
     3301 agcgcaccgc aacgccctcg gcctctgatg tatctgaacg gcgcggaatg ccgcgccaga
     3361 acctaattta caggacaaca aaatgagcga taagcagact gaaaagacca ttcaactgga
     3421 tactcccatc atgcgcggta aaacagaaat taccgaaatt gtgttgcgta aaccgcagtc
     3481 cggtgcgctg cgcggcacac gcctgcaggc cattatggat atggatgtga acgcgatgat
     3541 gaccgtgatc ccccgcatct ccagtccggc actgactgca caggaaattg cagagatgga
     3601 cccggcagat ctcactgcca tgtcggttga ggttgtcact tttttgttga agaagtcggt
     3661 gcttgccggt ttaccgacag cctgacggtt gacgatctgg tggctgatat cgccaccatc
     3721 tttcactggc cgccatccgt tactgacgtt atgccgctga ccgaagtgct ggaatggcgg
     3781 gataaagcga ttcagagaag cggggccagc catgagtgac aataacctgc gtctgcaggt
     3841 gattcttaat gcggttgaca aactcacccg cccatttcga tccgcgcagg ccagttcaag
     3901 agaactggct gctgctgtca aaaaatcccg cgatgcaata aagcagcttg atcaggccgg
     3961 gagcagtctg gacagcttcc gaaagctgca ggcagaaaat cagaaattag gcgacaggct
     4021 gaactatgcc cgccagcgtg caaatttgct cagtcaggaa ctgggagcga tggggccgcc
     4081 ttcgcaacgt caggttgttg ctctgggccg tcaacggctg gctgttcagc gcctagaaga
     4141 acgccagaaa aagctgcagc agcagacggc gcttgtgcgt gcagaacttt atcgtgctgg
     4201 tatttcagct aatgatggcg ccagtgcgac ggcccgcatt acccgtgaaa cgatgcgtta
     4261 taacaggcag ctttctgagc aggaagcgag gttacgacgt gtcggggagc aacagcgaaa
     4321 aatgcacgcc gcccgggggg cttacgccag gcgtcttgag gtaagggatc gtattgcagg
     4381 tgccggagcc accaccacgg ctgcagggct ggcaatgggc gcaccagtga tggcggcagt
     4441 aaaaagctat accagcatgg aagatgccat gaaaggtgtg gcaaagcagg tcaatggtct
     4501 gcgtgacgat aatggcaacc gcactgcgcg tttttacgaa atgcagggtg ccatcaaggc
     4561 tgccagcgaa cagttgccga tggaaaacgg tgctgtggac ttcgccgcac tggttgaagg
     4621 tggtgcgcgc atgaacgtcg caaaccctga cgacagctgg gaagaccaga aacgtgacct
     4681 gctggccttc gccagcacgg cggcaaaggc ggcaacagcc tttgaactgc cagcggatga
     4741 actgtcagaa agtctgggga aaatcgccca gctctacaaa atccctaccc gcaatattga
     4801 gcagctcggt gatgcgctga actatctgga tgataacgcc atgtcgaaag gggcggacat
     4861 cattgatgtc atgcaacgcc tgggcggtgt ggctgaccgt ctggattatc gtaaagcggc
     4921 ggcgttgggt tccaccttcc tgacactcgg cgctgcgcct gaggttgcag ccagtgcagc
     4981 aaacgcgatg gtgcgtgaat tgtccattgc caccatgcaa agcaagagtt tctttgaagg
     5041 gatgaatctg ctgaaactca atccagaagt gattgaaaag cagatgacga aggatgcgat
     5101 gggaactatc cagcgggtgc tggagaaggt gaatgcgctg ccacaggata agcgcctgtc
     5161 tgccatgacc atgttgtttg gtaaagagtt tggcgatgac gcagcgaaac tggcaaacaa
     5221 cctgccggaa cttcagcgcc agttaaaact gactgcgggc aatgatgcgc tcggttccat
     5281 gcagaaagaa tccgacatca acaaggattc actttctgct cagtggttgc tggtcaaaac
     5341 cggagcacag aacaccttca gcagcctggg ggaaacgctg cgccagccgc tgatggatat
     5401 tctgtacacg gtgaaaagcg tcacgggggc gttgcgtcgc tgggtggaag ctaacccgga
     5461 actgacgggc actctgatga aagtagccgc tgtggtagct gccgttaccg tgggcctcgg
     5521 caccttagcg gtggcgctgg ctgcagtgct ggggccgctg gcagtcatcc gtctgggatt
     5581 ctctgtgctg ggtatcaaaa cgttaccttc cgttacggca acagtaaccc gaaccagcaa
     5641 cgcgttgtcc tggctggctg gcgcaccact ggcactgctg cgacgcgggc ttgcttcatc
     5701 gggcaacgct gcaggtttac ttactgcgcc gttgtcgtct ttgcgccgca cggcatcact
     5761 gacgggaaat gtcctgaaaa ctgtagcagg tgcgccggtt gcacttttgc ggtctggatt
     5821 atccggttta cgtgcggttg ctgtgatgtt tatgaatcca ctggcggtac tacgcggcgg
     5881 actggctgcc acaggcacgg tgctgcgtat gctcgcatcc ggtccactgg cgatgctgcg
     5941 cgttgccctg tatgccgtct ctggtctgtt aggtgctctg ctcagtctga taggtcttgt
     6001 ggttactgca ctggcgggtg tggcgctggt tgtctggaaa tactggcagc ccatcaccgc
     6061 atttctcggt ggcgtggtgg aaggattcaa agcggcggca ggtcctgtca gtgccgcgtt
     6121 cgaaccgctt aagcctgtgt tccagtggat tggcgacaaa gtacaggcgc tgtggggctg
     6181 gtttactgat ctgctgacgc ccgttaagtc gacctctgcc gaactgcaga gtgcagcggc
     6241 aatggggcga cgattcgggg aggctctggc ggaagggctg aatatggtca tgcatccgct
     6301 ggactccctg aaatccggcg tttcctggtt gctggagaaa cttggcattg tcagtaaaga
     6361 ggccgcaaag gcgaaactgc cggaaagcgt gacgcgtcag caacctgcga cggtgaatgc
     6421 agacggtaaa gtgatgatgc catcgggtgg ttttccgtca tggggatatg gctttgcggg
     6481 gatgtatgac agcggcgggt atatcccgcg cgggcagttt ggcatcgtcg gtgaaaacgg
     6541 gccggaaatt gttaacggcc cggcaaatgt gaccagccgg agaaatacag ctgcactggc
     6601 tgccgttgtt gccggaatga tgggtgttgc tgctacgcca gcagagcttc caccgttgca
     6661 ccctttggca cttcccgcga aaggcggtga agcgatggtg agtcgtgcag ccactgtgcc
     6721 gcccgttcaa cggattgagg caccgatgca gatcatcatt caaacgcagc caggacaaag
     6781 tgcgcaggat attgcgcggg aggtggcccg ccagcttgat gaacgtgaac gcaggctgaa
     6841 ggcaaaagcc aggagtaact acagcgatca ggggggatac gacgcatgat gatggtgctg
     6901 ggattgtacg tgtttatgct gcgcaccgtg ccgtatcagg agctgcagta tcaacgcagc
     6961 tggcgacatg cggcaaacag ccgggtaaac cgacgcccgt caacgcagtt tctgggaccg
     7021 gacaacgaca tgctgacgct ttctggtgtt cttatgccgg aggtaacggg cggcaggctg
     7081 tcgttgctgg ctctggagca gatggcagaa cagggaaaag catggcccct gattgaaggc
     7141 agcggcacga tttacggcat gtatgtgatt gagggactga atcagactaa aacggagttt
     7201 ttccgcgacg gtatgccgcg ccggattgag ttcaccctgt cgctaaaacg cgtggatgaa
     7261 tccctgtccg atatgttcgg tgatctcagt gcgcaactga ataatctgca gggaacggca
     7321 acatctgcct taagcgatat cagtaaaacg gtgggagggc tgctgtcgtg aatttcagct
     7381 ctgaactgct taacaaaggc aacaaaactc cggcattcag catcagtatt gaaggcaggg
     7441 atatcaccac tgtgctggac aaccgcctga tggggctgac gctgacggat aaccggggct
     7501 ttgaagcgga ccagcttgat ctggagctgg acgacgccga tggaaaaatc gtgctgccgc
     7561 gccgtggggc tgtcattacg ctggcgctgg gctggaaggg acagccgctt ttcccgaaag
     7621 gggcattcac ggtggacgag attgaacaca ctggcgcacc ggatcgcctg actatccggg
     7681 cgcgaagtgc tgattttcgt gaaacgctga atacccgccg tgaaaagtcg tggcacaaga
     7741 ccaccgttgg ggaagtggtg aaggaaatag ctgcgcggca caaactgaag atggcattgg
     7801 gtgaagactt gtcggataaa ctcgtggagc atatagacca gactaatgag agtgacggca
     7861 gttttttgat gcggctggcg cgccagtacg gtgctattgc gtcggtgaaa aatggcaatc
     7921 tgttattcat ccggcagggg cagggtaaaa gcgccagcgg taaaccacta ccggtgatca
     7981 ctatcacacg caaggacggc gacagtcacc gctttaccct ggcagatcgc ggagcttaca
     8041 cgggcgtcat tgccagctgg ttgcataccc gcgaacccgc gaagaaagaa agcaccacgg
     8101 tgaagcgtaa gcgcaggact aagaagcaga agaaagagcc ggaagcgaag cagggcgatt
     8161 acctggtggg tacggatgaa aacgtgctgg tacttaatcg cacttatgcc aaccggagca
     8221 acgccgaacg ggcagcgaaa atgcagtggg aacgcctgca acgcggcgtt gcatcattct
     8281 cgctacaact ggcggaaggg cgggcagatc tctacacaga aatgcctgtg aaggtcagtg
     8341 gctttaaaca gccgctagat gatgcggaat ggaccattac gactctgacg catactgtca
     8401 gcccggataa cggttttacg accagtctgg agcttgaagt gaggattgat gatttcgaaa
     8461 tggaatgatt cttcgcaatg gagaactttt aagtttgcaa aatggaataa tgcggtatca
     8521 ttattgtgaa tttagcaaaa atggggagaa ctcgaaaaat gatgatttgc ccactgtgtg
     8581 gaagtgccgc ccatactcgc agcagttttc aggtatcttc attgaccaaa gagcgttaca
     8641 accagtgcca gaacattaac tgcagccata cttttgttac ccatgaaact tttgttcgtt
     8701 cgattgcaac gccaaaagag tcaaatccgg ttcagccgca tccaatgaaa tcaggacagg
     8761 tggcgctctc tctttgacgc tgccgccatt ttgtcgccat cgttaaaaaa cagtgcttct
     8821 aacatcatga ttttaaaagg cataaatttc agacaacaaa aacccatcaa ccttgaaccg
     8881 aaatggcggg gttgatgggc tccacaaaat ggggacatca aagaaaagca gtggcactaa
     8941 ttaagactga tgccctgcgg aaaagttctg cggttgtgca aaaaaatttc attttcaggg
     9001 caacttcagt tttatcctaa tcctggccat accatgacga tgattgtccc tgccagcgtc
     9061 agcaggacgt tggcgattgc gtaggtgccc gcatagccca gcgcagggat gttactgcga
     9121 gctgtatcac tgatgatctc cattgccggc gcgcaggtgc gtgcgcccat cattgcgccg
     9181 aacaacagtg cgcggttcat tcgcaataca taagcaccga acaagaaaca gataaccacg
     9241 ggcacaagac tgacaattaa tccggcaatc aacatctgac cgccaatcgc gcccaggccg
     9301 ttattaatac cgctaccggc gctcagacca acgcctgcca taaacaccat caagccgaac
     9361 tctttcacca tgcttaatgc accttgcgga atgtaaccga aggtcgggtg gttagcacgc
     9421 ataaagccca gcataattcc ggcgaataac aacccggcag cgttccccat gccgaaactg
     9481 aatgtgctga actggaaggt gatcatcccg atcatcagcc caataacaaa gaaggcgcaa
     9541 aatgccagca ggtcagtgac ctggctgtga atcgagataa agccgatgcg atcggcgatg
     9601 gtttttacgc gacgggcatc accgctgact tgtaaaacgt cacctttgtt aagcacgacg
     9661 ttgtcatcta tcggcatctc aatctggcta cgaatgacgc ggttaaggaa gcaaccgtga
     9721 tcggtcaact tcagttgtgc gagacgttta cctacagcgt tatggttttt aacgaccact
     9781 tcttcagtga cgatacgcat gtcgagaagg tcacgatcga aaacttcttt accgttacgg
     9841 aagctgggat cgagtcgggc atgggcgtcg ggatagccta ccaacgctat ttcatcgccc
     9901 atttgtagca cggcatcacc gtctggattt gccagaatcc cgttacgtcg aatacgttca
     9961 atgtagcagc cggtttgtcg ataaataccc agttcacgca gatttttgcc gtcggtccag
    10021 gccaccagct ccgggccgac gcgataggcg cggatcaccg gtaaataaac cttacggttg
    10081 gcatcagtgt ccaggccacg ttcgcgggcg atttgctggg cgctggtctg taagtcctga
    10141 tgctgcaatt tcggcaagta acgcgcacca acaatcaaac tcaccagacc gattaaatag
    10201 gttaaggcat acccgaggct cagattatcc agtgccagtg agagctgcct gctttccatg
    10261 ccggaatgac gcagtgtatc gccagcaccg accagaaccg gtgtcgacgt catagagcct
    10321 gctaacatac cggccgtcag gccaatatcc cagccaaaca gcttacctaa ccctaaggcg
    10381 atcaccagcg cactgccaac catcaccagt gctaacatta ggtaattttt cccatcgcga
    10441 aaaaaaatgg aaaaaaagtt cggtccggct tcgaccccga cgcagaaaat aaacagcata
    10501 aagccaagat taagcgcatc ggtgttaatg ctgaaatgtt gttggcctaa taacagcgat
    10561 acgactaaaa cgccaatgga attacccagt tggatcgaac caagtcgtaa ctttccgaga
    10621 catagcccaa gcgcgaggac cacaaataat aacagaatgt aattcccatt taacaattcg
    10681 gcgacgttta tattcacgga ggctaacttc ttgtttacta gtaagctgtt gaaagaaatg
    10741 gtaatttacg ataatgtttt ttaccagaat tcagggcgca gattcattca gcgcacctaa
    10801 acgatagtaa agtaacaata tattttacta gtgtaatcac attaggtatc aacggctata
    10861 tgaattgcgt tggcctatat tagcatggaa tgcgaagcgg ctttatctta ctgaacgcca
    10921 cactggcgaa aaatgtgttc gatagacgca gtgtcaggag gaacgagtga aacataaaca
    10981 acgttgggcg ggggcaatct gctgttttgt cctcttcatt gtggtgtgcc tttttctggc
    11041 gacgcacatg aaaggcgctt ttcgggctgc cgggcatcct gaaatcggct tgctgttttt
    11101 cattcttcct ggagcagttg ccagtttctt ttcacagcgt agagaagtcc tgaaacctct
    11161 atttggcgca atgctggcgg caccctgttc aatgctcatt atgcggctgt ttttttcacc
    11221 gacgcgctca ttctggcaag agctggcatg gttactaagc gcggtgttct ggtgtgcgct
    11281 gggggcactg tgtttcttat ttatcagtag tttgtttaaa ccacagcaca gaaaaaatca
    11341 gtaaagccct caacgcgagg gcttgtcaga cgatcaggcg tccagatttt ctttcaccca
    11401 tgcagcaaaa tcggtatagc cgccgatatg ttgctgatcg acaaaaatct gcggcacggt
    11461 ttctacgggt ttacctgcct tttgttgtag atcttcttta gtgatccctt ccgcacgaat
    11521 atctacatac tgatactgaa aatcatcgcg ttcattgctc aatttctcag ccagatcttt
    11581 tgcacgcaca cagtaagggc aacccgaacg accaaaaata acggtttgca ttatttctct
    11641 cctcatagat ttatgcctgt aatgatcacg ctaaaatgta ttcgctgaaa gtaggtttaa
    11701 cctgttgcat taattgctaa aagctataac tgttaaacac aatacagtga aaagttttag
    11761 actgaaggct cactttgcag agggaagcgt atgcgcgcga tcggtaaatt gcctaaaggc
    11821 gtgttgatac tggaatttat cggaatgatg ctactggcgg tggcgctgct gtcggtaagc
    11881 gactccctgt cgctgcctga gccattttct cggccagaag tgcagattct gatgattttt
    11941 ctcggtgttt tgctcatgct tcccgctgcg gtggtggtta ttcttcaggt ggcaaaacgt
    12001 cttgccccac agctgatgaa ccgtccaccg caatattcac gttcagaaag agaaaaagat
    12061 aatgacgcca accattgaac ttatttgtgg ccatcgctcc attcgccatt tcactgatga
    12121 acccatttcc gaagcgcagt gtgaggcgat tattaacagc gcccgtgcga cgtccagttc
    12181 cagttttttg cagtgtagta gcattattcg cattaccgac aaagcattac gtgaagaact
    12241 ggtgacgctg accggcgggc aaaaacacgt agcgcaagcg gcggagttct gggtgttctg
    12301 tgccgacttt aaccgccatt tacagatctg tccggatgct cagctcggcc tggcggaaca
    12361 actgttgctc ggtgtcgttg atacggcaat gatggcgcag aatgcattaa ccgcagcgga
    12421 atcgctggga ttgggcgggg tatatatcgg cggcctgcgc aataatattg aagcggtgac
    12481 gaaactgctg aaattaccgc agcatgttct gccgctgttt gggctgtgcc ttggctggcc
    12541 tgcggataat ccggatctca agccgcgttt accggcctcc attttggtgc atgaaaacag
    12601 ctatcaaccg ctggataaag acgcactggc gcagtatgac gagcaactgg cggaatatta
    12661 cctcacccgt ggcagcaata atcgccggga tacctggagc gatcatatcc gccgaacaat
    12721 cattaaagaa agccgcccat ttattctgga ttatttgcac aaacagggtt gggcgacgcg
    12781 ctaaaaccgc cacgtcgatg tatgatacgc gggcttttga ccaggtctga cagagaggtg
    12841 cagggtgaaa attgccatat tgtcccggga tggaacgctc tattcgtgta agcggctgcg
    12901 tgaagccgct atacagcgcg gtcacctggt tgaaattctt gatccgcttt cttgctacat
    12961 gaacataaat cctgcggcgt cttctattca ctacaaaggc cgcaagttac cccattttga
    13021 cgcagtgatc ccgcgtattg gcaccgccat taccttttat gggacggcgg cactgcgcca
    13081 gttcgagatg ctggggagct atccgctcaa tgagtcggtc gccattgccc gggcgcgtga
    13141 caaattgcgt tccatgcaac tgctggcgcg tcagggcatc gacctgcctg tcacgggcat
    13201 tgcgcattcg ccggatgata ccagcgattt aatcgacatg gtcggtggtg cgccgctggt
    13261 ggtcaagttg gttgaaggca cgcagggaat tggcgtcgtg ctggcggaga cgcgtcaggc
    13321 ggcggaaagc gtgattgacg ctttccgcgg tctgaacgcg catattctgg tgcaggaata
    13381 tatcaaagag gcgcaagggt gcgatatccg ctgtctggtt gttggcgatg aagtggtcgc
    13441 tgcgattgaa cggcgggcga aagagggcga ttttcgttcc aatttgcatc gtggcggcgc
    13501 ggcaagcgtc gccagtatca caccacagga gcgtgaaatc gcgataaaag ccgcgcgaac
    13561 gatggcgctg gacgttgctg gtgtggatat tctgcgtgct aatcgcgggc cgttggtgat
    13621 ggaagtgaat gcgtcgccgg ggctggaagg aatagaaaaa accactggta tcgacatcgc
    13681 gggtaaaatg atccgctgga tcgaacgcta cgctacgaca gaatattgcc tgaaaacggg
    13741 tggttagtcg caatcacatt actgatcatg gttttgcctg cgctttttgc gtaagctgtg
    13801 ccggtctttt tatcgaaaga ggttgtacaa aattatgaca tcgctggtcg ttcctggtct
    13861 ggatacgctg cgtcaatggc tcgatgacct ggggatgagt ttttttgaat gtgataactg
    13921 tcaggctctg catctgcccc atatgcagaa tttcgacggt gtctttgatg ccaaaatcga
    13981 tctgatcgat aacacgatcc tgttttctgc catggcggaa gtccgacctt cagccgtatt
    14041 gccgctggcg gcggatttat ctgccatcaa tgccagttcg ctgaccgtga aagcatttct
    14101 tgatatgcag gatgataatc tgccaaagct ggtggtttgc cagtctttat ccgttatgca
    14161 gggcgtaacc tacgagcagt ttgcatggtt cgtgcgtcag agcgaagagc agatttcgat
    14221 ggtcattctt gaagctaatg cccatcaact gctgttaccg actgacgatg aagggcaaaa
    14281 caacgttacc gaaaactatt tcctccactg ataactcctt tcgagcacgc agtcgctggt
    14341 gcagtgactg cgcactgcaa aattatctgc tgtttttaac cttttcttaa agattatttc
    14401 acttctcttg tgccgatttg gctttatcac atagagcaaa tacgcataac aatttgttaa
    14461 ataccgtttt ttaatccgag ctatagtctc aaaccctggc taaagttatt cttgcgatgc
    14521 ttttatatag cgagcagtgc tggccgggag agagttatct tttcttacac cgcgccgata
    14581 aaaaatatgc acgtttattg catatctttt agtatgacaa cttttgttcg tttgttaacg
    14641 aactttcaga aggaaagaga tatgaccgcc ttaaataaaa aatggctttc gggtctggtt
    14701 gcgggtgctc tgatggccgt ctctgtcggc acgctcgcgg ctgaacaaaa aacactccac
    14761 atttataact ggtctgatta tatcgcccct gacacggtgg ccaattttga aaaagaaacc
    14821 ggtattaaag tcgtctacga tgttttcgac tctaacgaag tactggaagg caaattaatg
    14881 gcgggtagca ccggctttga cttggtggtt ccatctgcca gctttcttga acgccagttg
    14941 actgcgggag ttttccagcc gctggacaaa agcaaattgc cggagtggaa gaatctcgac
    15001 ccggagctgc tgaagctggt cgccaaacac gatcccgaca ataaatttgc tatgccctat
    15061 atgtgggcga cgaccgggat tggctataac gttgataaag ttaaagctgt gctgggcgaa
    15121 aacgcgcccg tcgatagctg ggacttgatc ctcaaacctg aaaatctgga aaaactgaaa
    15181 agctgcggtg tctctttcct ggatgcgcca gaagaagttt ttgctaccgt gttgaattat
    15241 ctcggcaaag atcccaacag cactaaagcg gatgattaca ccggaccggc aaccgatctg
    15301 ctgttaaagc tgcgcccgaa cattcgttat ttccattcat ctcaatacat taacgacctg
    15361 gcaaacggcg atatttgcgt cgctatcggc tgggcaggtg atgtctggca ggcgtcaaac
    15421 cgcgcgaagg aagcgaagaa tggagtgaat gtctcgttct cgattccaaa agaaggggcg
    15481 atggcgttct ttgatgtatt cgccatgcct gcggatgcca aaaacaaaga cgaagcctat
    15541 cagttcctga attacctgct gcgcccggat gtagtagcgc atatttccga ccatgtgttc
    15601 tatgccaacg ccaataaagc agccacgccg ctggtgagtg cggaagtccg tgagaacccg
    15661 ggtatttatc ctccggcgga cgttcgtgcg aagctattca ctctgaaagt acaggatccg
    15721 aaaatcgacc gtgtgcgcac ccgcgcgtgg accaaagtga agagcggaaa ataatccgca
    15781 gccttagatg ccgggcgggc gcaccacacc cgccggcaat tcgcaccatc atggtgcgct
    15841 tgcacacatt caatgccgga gagcagccgt gaatgacgct atccctcgcc cgcaggcgaa
    15901 aacccgtaag gcgctgacgc cgctattaga aatccgcaac ctcaccaaat cctacgatgg
    15961 tcagcatgcg gtcgatgatg tcagcctgac catctacaaa ggtgaaatct tcgcgctgct
    16021 gggcgcttcc ggctgtggca agtccacgct gctgcgtatg ctggcaggtt ttgaacaacc
    16081 ttctgccggg cagataatgc tcgatggcgt cgatttgtca caggtgccgc cttacctgcg
    16141 ccccatcaat atgatgtttc agtcttacgc gctgtttccg catatgaccg tggaacagaa
    16201 catcgctttt ggcctgaaac aggacaaact accgaaagcg gaaattgcca gtcgggtcca
    16261 tgagatgctc ggcctggtgc acatgcagga gttcgccaaa cgcaaaccgc atcagctttc
    16321 cggtggtcag cgacagcgtg tggcgctggc ccgaagcctt gccaagcgcc cgaaactatt
    16381 actgctcgac gagccgatgg gcgcgctgga taaaaagctg cgtgaccgga tgcagcttga
    16441 agtggtggat attctggagc gtgtcggcgt gacctgtgtg atggtcactc acgatcagga
    16501 agaggcgatg acgatggcgg gacgtatcgc cattatgaat cgcgggaaat ttgtccagat
    16561 tggcgagcca gaagagatct acgaacatcc aaccacccgc tacagtgctg aatttatcgg
    16621 ttcggttaat gtctttgaag gtgtactcaa agagcgtcat gaggatgggc ttgtgcttta
    16681 ttcgcctggg ctggtgcatc cactgaaagt cgacgcggat gcctcggtgg tcgataacgt
    16741 gccggtacat gtggcgctgc gcccggaaaa aatcatgctt tgcgaagagc cgcccgccaa
    16801 tggttgtaac ttcgcggtgg gggaggtgat acacattgcc tatctcggcg atctttcggt
    16861 gtatcacgtt cgtctgaaaa gtgggcagat gattagcgcc cagctacaaa acgcccatcg
    16921 tcatcgtaaa gggttaccga cctggggcga cgaagtgcgt ttgtgctggg aagtggacag
    16981 ctgtgtggtg ctgacggttt aaggagcaaa gatgaataca cttgaacctg ctgcccagtc
    17041 gaaaccgccg ggcggattta agctgtggtt gtcgcagctg caaatgaagc atgggcgcaa
    17101 actggtcatt gcgttgccat atatctggtt gatcttgctg tttctgctgc catttctgat
    17161 tgtctttaaa ataagcctgg cggagatggc gcgcgctatt ccaccttata ccgaactgat
    17221 ggagtgggct gacgggcaac tgtccatcac tcttaatctc ggtaattttc tgcaactgac
    17281 cgacgatccg ctctatttcg atgcttatct ccagtcgcta caggtggctg cgatttcgac
    17341 attttgctgt ttactgatcg gctatccgct ggcgtgggcg gtggcgcaca gtaagccttc
    17401 gacccgtaat attttattac tactggtgat cctgccgtcg tggacctcgt ttctgatccg
    17461 cgtttatgcc tggatgggaa tattaaaaaa caacggtgtg ctgaataatt ttctgctgtg
    17521 gctgggggtt atcgatcaac cgctgaccat tcttcatacc aatctggcag tttatattgg
    17581 cattgtttac gcctacgtgc cgtttatggt gctgccgatt tataccgcgt tgattcgtat
    17641 tgattattcg ctagtggaag cagcgctgga tctcggtgca cgaccgctga aaacgttctt
    17701 tactgtgatc gtgccgctga ctaaaggtgg gattattgcc ggatcgatgc tggtgtttat
    17761 cccggctgtg ggcgagtttg tgatcccgga actgctcggt ggcccggaca gcatcatgat
    17821 cgggcgcgtg ctatggcaag agtttttcaa taaccgcgac tggccggtgg ccgcggcggt
    17881 agcgatcatc atgttgctgc tgctaattgt gccgataatg tggttccaca aacaccagca
    17941 aaaaagcgtg ggagaacacg gatgaataat ttaccggtag ttcgttcgcc ctggcggatt
    18001 gtgattttgc tgctgggctt tacctttctc tacgcgccaa tgctgatgct ggttatctat
    18061 tcgtttaaca gctcgaagct ggtgacggtg tgggccggct ggtcaacgcg ctggtatggt
    18121 gagttattgc gcgatgacgc gatgatgagt gcggttggtt taagcctgac aattgctgcc
    18181 tgtgcggcaa cggcggcggc gatcctcggg actattgcgg cggtggtgct ggtgcgcttt
    18241 ggcaggtttc gcggatcaaa tggctttgcc tttatgatca cagcgccgct ggtaatgcca
    18301 gatgtcatca cgggcttgtc gctgttgtta ttattcgtcg cgcttgctca tgccattggc
    18361 tggcctgcgg accgcggtat gcttaccatc tggctggcgc atgtcacttt ctgtacggct
    18421 tatgtggcgg tcgttatttc gtcgcgtctg cgggaactgg atcgctcgat agaagaagca
    18481 gcgatggatc tcggtgcgac gccgctgaaa gtgtttttcg tcattacgct accgatgatc
    18541 atgcctgcga tcatttctgg ctggttactg gcttttactt tgtcgcttga tgatctggtg
    18601 atcgccagct ttgtttccgg gccgggagcc accacgttac cgatgctggt cttttccagc
    18661 gtgcggatgg gggtgaatcc ggaaatcaac gcccttgcaa cgttaattct cggtgcggtc
    18721 ggaattgtcg gatttatcgc ctggtatctg atggctcgcg cagaaaaaca gcggatacgc
    18781 gatatccagc gtgcaagaca tggctgaaga cactaaaatt tgccaacctg gctacataat
    18841 gccgcgcatg ccgcggcatt gttttcatgg aagacgaaac gttgggattt tttaagaaaa
    18901 catcttcatc tcatgctcgc ctgaatgtgc ctgcgctggt gcaggtagcg gcgctcgcca
    18961 ttattatgat ccgtggcctc gacgtgctga tgattttcaa tacgctgggc gtgcgcggta
    19021 ttggcgagtt cattcatcgc agcgtacaaa cctggagctt aacgctggta tttttaagca
    19081 gtctggtgct ggtttttatc gagatctggt gtgcgttttc actggtgaaa gggcgtcgct
    19141 gggcgcgctg gctatatctg ctgacacaaa tcaccgccgc aagttacttg tgggcggctt
    19201 cgctggggta tggttatccg gagctgttca gcattcccgg tgaatcaaaa cgtgaaatct
    19261 tccatagcct gatgctgcag aagctgccgg atatgctcat cctgatgctg ctgttcgttc
    19321 cctcgaccag tcggcggttc ttccagttgc aataatgtgt ataatcgtcg cccctgatga
    19381 tgtgaaggtc aatgtatgca gtgcgcactt tacgacgcgg gtcgctgtcg ttcctgtcag
    19441 tggataacgc agccgattcc agagcaactc tccgctaaaa ccgccgatct taaaaatctg
    19501 ctcgccgatt ttccggttga ggaatggtgc gcgccggtgt caggcccgga acaagggttt
    19561 cgtaataaag ccaaaatggt ggtgagtggt agcgttgaaa aaccactgct cggtatgctg
    19621 catcgcgatg gcacgccgga agacctttgt gactgcccgc tttatcctgc ctcttttgcg
    19681 cccgtttttg cggcgctaaa accgtttatc gcccgtgcgg ggttaacgcc ctacaacgtg
    19741 gcgcgtaagc gtggcgaact gaaatacatt ctgctgactg aaagccagag cgatggcggc
    19801 atgatgctgc gctttgtact gcgttctgaa accaaactgg cacaactgcg taaggcgctg
    19861 ccgtggttac aggaacaact accgcaactg aaagttatta ccgtcaatat tcagccggta
    19921 catatggcga ttatggaagg ggagacggag atctacctga ctgaacaaca ggcgctggca
    19981 gagcgtttta atgacgtacc gctgtggatc cgtccgcaaa gtttcttcca gactaatccg
    20041 gcggtcgcca gccagctgta cgctaccgcg cgcgactggg tacggcagct gccagttaaa
    20101 catatgtggg atctgttctg cggtgtgggg ggctttggtt tacactgcgc gacgcctgac
    20161 atgcagttaa ccgggatcga aattgcgcca gaggccattg cctgtgcaaa gcagtcagcc
    20221 gctgaactgg gcttaactcg tttacaattt caggcgctgg actccactca gtttgccact
    20281 gctcaggggg aggtgccgga gctggtgctg gttaacccgc cgcgccgcgg cattggtaaa
    20341 ccgctgtgtg attatctctc aacgatggca ccgcgtttta tcatctactc cagctgtaac
    20401 gcccaaacta tggcgaaaga tatccgcgaa ctgcctgggt ttcgcatcga acgggtacag
    20461 ctttttgata tgttcccgca caccgcgcac tatgaagtgc tgacgctgct ggtgaagcaa
    20521 tctgaagccg caggtgcggc ttcagattgc tgatcaggtg cgctttgttc atgccggatg
    20581 cggcgtgtac gccttatccg gcctacaaaa tcatgctaaa tcaatacatt gcagagttga
    20641 tgtgggccag ataagcgcag cgcatcaggc aatcttactt ttgtcatcag tctcaattac
    20701 tgcgggaacc actggtcatt gattttctga tatgtaccgt cagctttaat tgctgccagc
    20761 gcgttattca gtttttccag cagagctttg ttatccggac gtacagcgat gcccagaccg
    20821 gtgccgaagt attgcggatc ggtcactttt tcagtagcaa cgcccagttg cggattggtt
    20881 ttcagccatt cgtttaccac cgctgtgtca ccaaataccc catcaatacg accatttttc
    20941 agatcgataa aggcattctg ataactgtca taggagacag ttttcacttc ggggtgctga
    21001 tcctgaatat atttctggtg cgtggtgccg ttttccatcc caatacgttt gcctttcaga
    21061 tcggcaaacg ttttgtaggt atcttttttg gcaatcacga cggctgagtt ttcatagtag
    21121 ggcgtggtaa acgatacctg cttgctacgc tcgggcgtga tatccatacc ggagattacg
    21181 gcgtcatatt ttctgaattt cagtgacggg atcaggctgt cgaacgcgtg attagtaaaa
    21241 gtacattctg cctgcatttg tttgcacaag gcttttgcca gatcgatatc aaagccgaca
    21301 atctcattat tagcacctat agattcaaag ggtggatagg tggctgaaac gccaaaattg
    21361 attttctctg cggcagaagc accgaaagta aaggaagcaa gtaaagcggc aagaactaac
    21421 tttttcatga tggaactccc gtctgtcaat cttatgattt ttggccgtgt ctgcggcatg
    21481 ggataacaat gccatcaagt gaatttatat gcaataaata tgattaaata atttaaatga
    21541 aataaaaaac gccggataac ttagtgagtt gtccgtcttc attataagaa tttatgcact
    21601 atgtaggccg gataaggcgt ccacgccgca tccggcacag gcaccgtgct gatgtctgat
    21661 gcgacgctgg cgcgtcttat cagacctaca aaccccccgg cgaatgtacg cagctacatt
    21721 aattccgccg ttcgaatgcc agtgctttgc gctcgatcag acgcatcatc agcgtcagca
    21781 ggccgttgac gaccaggtaa ataatccctg ccgcaccgaa caccattaca tcgtaggtgc
    21841 gtccgtacaa caactggctg tatcccatca cttccatcag cgtaatggtg taagccagag
    21901 aggtactttt gaacaccagc accacttcgt tggaataaga agagagcgag cgtttaaagg
    21961 catacggcag caggatcgcc agcgtatctt ttttgctcat tcccagggcg ctacaggact
    22021 gccactgacc ttctgggatc gcacgaattg caccgtaaaa cagctgcgtg gtatacgccg
    22081 cactgttcag cgataacgca atcagcgcac ataaccacgg ttctgacaac aaatgccaca
    22141 gtgccggata ctcctgcaaa gtcggaaact ggcccggccc gtaataaatc aggaagatct
    22201 gcaccagcag cggcgtaccg gtaaacagcg tgatataacc ccgcaccagc cacaccagca
    22261 ccggcgtttt cagcgtcagg atgatggtaa aaatcaatgc cagaatcagt gccacaatca
    22321 gcgaggcaac ggttagcgtc aggctggtgt gtagcccttt catcagttcg ggtaaatact
    22381 caaacattag ctgggcctcc gctcaaaacg tgtcgcgcgc aggtcaatgc gtttgagaat
    22441 gtactgactg agcagggtga tcaccaggta aatcgccgcc gccacaatat accaggtaaa
    22501 tggttcctgg gtacgagtag cgatgctttt tgtttgcagc attaaatcat tcacactaat
    22561 caaactgacc agcgcggtat ctttcagcag caccagccac tggttaccga ggccaggcag
    22621 cgcatgacgc cacatctgcg gcatcaccag acggaaaaag atagccgatt tcgacagccc
    22681 cagcgcctga ccagactccc actgacccac cggcaccgct ttcaacgcgc cccgaagcgt
    22741 ttgcgaggca taggcggcat acagcagtga cagagcgatg acaccacaaa ggaacgggct
    22801 aacgtcgaag ttctcaatgt ccatctgcac tgggatctgc acgaacccaa gattgatagt
    22861 gaagccatcc gaaagcgtca gcagcagctg cgaggagcca aaatagataa acagcaccac
    22921 cagaatttct ggcaggccac gcagaatggt taccagcgct gaacctgccc acgcgacagg
    22981 acgccatttt tccgactccc ataccgcaaa gaacatcgcc agcgccagcc cgacaatcaa
    23041 tgcacaaacg gcaaggccga cggtcatccc ggcggcgctt gctaaaggaa aaaattcatt
    23101 catcaggaat tacttctgga accatttgtt gtagatggtt tcgtaagtgc catctttctt
    23161 cactttttcc agcgcagtgt tgagtttctg ctgcagctca gtgttgccct gacgtaccgc
    23221 gatgccgagg ccagtgccga agtaatcttt atcggtcact ttgtcgccca ccgccgccag
    23281 tttcgggtta tctttcagcc actcagtgac cactgcggtg tcaccgaaga cgccgtcgat
    23341 acgcccgttt tgcagatcca gttttgcgtt ctggtagctg ttatacggaa cggtagtgat
    23401 ttccgggtgc ttatccataa tgaatttctg gtgtgtcgtc ccgttctgta cgccgacttt
    23461 tttgcctttc agctgatcaa cactggtgta tttgccttgc tgacccacaa acagggcaga
    23521 gttgtcatag tacggggtgg taaacagcac ctgcttttca cgctccggag tgatatccat
    23581 gcccgccatc acggcttcta cgcgacggaa tttcaggctt gggatcaggc tgtcaaacgc
    23641 ctggttagag aaagtgcagg ttgcatcaat ctctttacac agcgcttgtg ccaggtcgac
    23701 gtcaaaacca acgatctggt tgtttgcatc aatcgattca aacggaggat aggatgcttc
    23761 ggtagcaaaa cgaatggttt cggcagctgt ggcggaaaga ctaaaacctg caattaacgc
    23821 ggcaatcaga acttttttca ttgttgttat cccgaatctt agtgagagag atagttttta
    23881 aatgcttcgg tttgcggctc ggtaaagcag ctcgcgtcgc cttgttctac gatatgacca
    23941 ttttccatat acaccactcg gctggcggtt ttacgcgcca cttcaacttc gtgggtgacg
    24001 atcacctggg taatattcgt ttctgccagc tcacgaatga tgctgacgat ttgtgccgta
    24061 atttccgggt ccagtgcggc ggtcggttca tcgaacagca gtacctgcgg ttccatcatc
    24121 aacgcacggg caatagcaac acgctgctgc tgaccaccag aaagatgcag cgggtaacga
    24181 tcgctataag gtttgagacg cagacgttcc agcagttttt ctgcacgggc cagcgcctga
    24241 tctttactca accccagtac acggcagggc gcttcaatca ggttttgctg cacggtcaga
    24301 tgcggccaca ggttgtattg ctgaaacacc atgccaacgt tacgacgcaa atcgcgaatc
    24361 gctttgtcag agggtgtttt ggtgaaatcg aaatggttgc ctgcaatgtt gagcgtaccg
    24421 gagcgcggca tctcaagcag attgagtaca cgcagcagcg agcttttacc cgcgccgctg
    24481 gggccaagta acaccagcgt ttcgccctgt gggcaatcca gcgtgatatc gaacagcgcc
    24541 tgatgcgcgc cgtagaagca attaatgccg tttaattgaa tactcattga cactcgtata
    24601 ctggcagtct gatagctatt gaggtcgaag atagtacctt tgacagaata attatgcaat
    24661 atttctgctt taaaagttaa aagcaaagcg cattattcaa taaacatagc acaaaataac
    24721 gggggcggtg gtcggcgagc ataaatgtcg gcattcctca cgaaatgccg gacaatttac
    24781 ggggtttatt ggttgatcaa ggcgttagcg attctcgatg gactgacgga gcgtacccgc
    24841 cgtggcatga acgctgccgc ctaagtagcg tacatcgtcg atcacccaac actggccttc
    24901 ctgaatcatt aacacttcat cctgccagct ctgatcaccc tgttttagat ccacacgcag
    24961 aggaatattt cgcgcatcac gattcgggat tgttgaggca ctggcaacac gggcgctctc
    25021 tggcaaggtt gtgcgactgg agaatggatc gttggtcagt agttcccgat ggttattatc
    25081 ccgggaggca tcgctaagca gtgtcgccag tttgtcgctc agataagggc gcaaggcggt
    25141 gatgtcgttg ctgcggtgca aaatgcggta gtcataaaat tgctgggcca cgttacccgg
    25201 gcctccttca acgcaaggac cactgcgtgt gccgttatct ttataagctg gagtgactgt
    25261 ggtgcaggca ctgaggagca gtgcgcaggg gataagcatt gtcaatttgc tgtagcgcat
    25321 aatgatttcc ttataagcga tcgctctgaa agcgttctac gataataatg atatcctttc
    25381 aataatagcg tatcagtctg ataatgcttt tgagatcgaa ggcttagcaa acaaggagat
    25441 cgatcatgca attttctaca accccaactc tggaaggcca gaccatcgtt gaatattgcg
    25501 gtgtggtgac cggcgaagcg attttaggtg ccaatatttt ccgtgatttc tttgccggta
    25561 tccgcgatat cgttggcgga cgttccggtg cgtatgaaaa agaactgcgt aaagcacggg
    25621 agatcgcctt tgaggaatta ggctcccagg cgcgggcgct gggggccgat gccgtcgtcg
    25681 gtattgatat cgactacgaa acggtcgggc aaaacggcag tatgctgatg gttagcgtca
    25741 gcggtacggc ggtgaaaacg cgtcgatgag aagagtcttc tggctggtcg ctgccgctct
    25801 gttattggca gggtgtgcag gcgaaaaagg cattgtcgag aaagagggat atcagcttga
    25861 tacccgacgc caggcgcagg cggcgtatcc gcgcattaaa gtgctggtga tccactacac
    25921 cgcagatgat tttgatagct cgctggcgac actgaccgat aagcaggtca gctcgcatta
    25981 tctggtccct gcggtaccac cgcgatacaa cggtaaaccg cgcatctggc aactggtgcc
    26041 ggaacaagaa ctggcctggc atgcggggat tagcgcctgg cgcggggcaa cgcgccttaa
    26101 cgacacctct attggcattg agctggaaaa ccgtggctgg caaaaatcgg ccggagtgaa
    26161 atattttgcc ccgtttgaac cggcacagat tcaggcgctt attccactgg cgaaagatat
    26221 tattgcccgt tatcacatca agccggaaaa cgtagtggca catgcggata tcgcaccgca
    26281 gcgcaaagac gatccggggc cattatttcc ctggcagcaa ctggcgcagc aggggattgg
    26341 tgcctggccg gatgcgcagc gggttaactt ttaccttgcc gggcgcgcgc cgcacacacc
    26401 ggtagatacc gcgtcattgc tggagctttt ggcgcgctac ggttatgacg ttaaacctga
    26461 tatgacaccg cgcgagcagc ggcgcgtgat tatggcattc cagatgcatt tccgcccgac
    26521 gttatataac ggcgaagcgg atgcagaaac tcaggcgatt gccgaagcat tgctggagaa
    26581 atacgggcag gattagcgcg gcagttttcc gtggtcgcgt agccaggcgg cagttttctc
    26641 gataccttca tccagggtga tgaccggctg ataacctaac tcttcctgcg cacgcgtaat
    26701 atccagcgta aagtcaaaat tcaacttgga gacgccgtag tgggtcagcg gcggctcttt
    26761 tgctgacttg cggaaacgct ccatgctgcg ggcgatcata tccagcatcg ggtaggggac
    26821 ggaacgaata cgacagtcaa tattcaactc gtcgatcagc ttctgcacga tgctgcacag
    26881 tgtgcgatgc tcgccgttgg tgatgttgta cacacgcccg gaaggtagct tatcgcaggc
    26941 ttcctggctt gccagccaca ttgcgtgcac ggcattttca tagtaggtca tatcgaccag
    27001 cgcactgccg ccatgcggta acagaatact gccgtagtgg tgcatcatat gcgccagacg
    27061 gggaataaag actttatcgt gcggtccgaa cagactttgt gggcgcagaa tagtaaagcg
    27121 cgtttgtgga ttcgcctgcg aaaacatatt gatcacttct tcgctggctg ctttgctgcg
    27181 ggcaaactcg ttggcgaagc ggtgagggcg aaaatcttct ttaatatcgc gatggtggtg
    27241 ataatcgaag tacagggagg gggaagagat atgaataaag ttacgcacac cccaggcgac
    27301 agcccattca cccaagcggc gagtggcgcg aacgttagcc agatcgaaag cctgttgtgt
    27361 cccccagggt gaggtaaagc tggagcagtg ccacagcgta tcaatgcccg cgagcatcac
    27421 tttagcttgt gatgaaacca gctcggtcag atccgccgga acaaactctg cgcccatttt
    27481 ttccagcaat ttgcccattg cctcgttgcg accggtcgct cgcacgctga tgcctttctg
    27541 gcataaaaac tctaccgcgt ttcgacctaa gccgctggtg gcgccggtaa ccagtacctt
    27601 catatcaatc cactgttgtt gagaaaataa cgtgcgcatt cttccgtgat ttcccccatg
    27661 atgcaatggg aaacatgaaa gaataacgca ggttttgtcg attaatctgt gctttgttct
    27721 gccagtctgg cgatttgttt tgccattccg cgaaaaataa acagatgcgc ggggatcatc
    27781 aataaccagt aaaacagccc cggcataccg tgcggatgcc agaaagcgcg gacatcgata
    27841 gtacgatagt cgcctttatc ttccaggcta aaacacagtc gtcccagccc cggcgctttc
    27901 atgccaaata acaacgtaag ttgtttttcc ggttcaacga caatcacttt ccagctatct
    27961 accgcatcgc cagtctgtaa atattcgcgc tccgggcggc ctttcgccag cttatgaccg
    28021 atcgcgcggt ccatcaacgc ccgtgtctgc cacaaaatat tgccaaagaa ataacgctct
    28081 ttaccgccga tttggttcac tacctgccat aaagcagcaa ggctggcgga cgttttaacg
    28141 gtaaaccccg cctgtttggc aaaataaccg tactccggtc gccagcgggc aaaggcctga
    28201 gcgtcgtagc cccagtcgct ggagttgacc agtttttcct cctctttcaa cgtgctacgt
    28261 accgcgtcat cgaaagcgat cagccgttgt gggatgagtg cacgtagcgc ggtatcatcc
    28321 gccagcagat cgtgtttcag cccctgaatc aacgccctgg cggtggtggg cggtacggaa
    28381 gtaatcacat tgagaaacca caccgaaatc cagcgggtgg ggagggggat ggggatcaac
    28441 cagcggcgct tgccgctcac cgccataaaa tgttcaaact gttgctgata actgagcacc
    28501 tctggtccgg cggcttcgaa gatgcggtgt tcgctggccg gatgatctaa caacgccacc
    28561 agatagtgca gcaagttttc cagcgcgatg ggcgtggtgc gtgaacgtac ccagcgtggc
    28621 ggcgttaaca ctggcaggtt gtagaccata tcgcgcatga cttcgaacgc cgctgaacct
    28681 gcgccaacga taattccggc tcgaagttcg gtcacaggta cattcgcttc acgaagaatg
    28741 tccgccgtag cctgacgagc acgcagatga tccgactgct catgtggcgg ggcctgcaac
    28801 gaactgagaa agattaattg cttaactggt acttcacgta gcgcatcgcg gacgttgaga
    28861 gccacctggc gctcctgagc gataaaatcg ccgccttcgc ccatgctgtg caccagaaaa
    28921 tagacggtat cgatatcctg caacagggcc ggaaggttat ccggccagct gagatcgact
    28981 ttatggcaac tgacgtttgc cagttgcagc tttgcaagcc tgtcgacatg acgtgccgcc
    29041 gccaggatct gatgcccttg ctggctgagt gtgcgcacca gatgctgacc aatgtagcca
    29101 ctggcaccga gaactaaaat gcgttgcggc acgtctctct ccttaacgcg ccaggaatgc
    29161 gcgccagtgg gcggcgactt ccgccagttg ttcgcgcgag acgtcaagat gcgtcaccag
    29221 gcggacaatc ggcgaggcgt taatcagcac gtttctcact ttcatgtatt cgcctaacgc
    29281 ggcagcattt tcttccccga cgcgaacaaa cagcatatta gtgtcctgac gcatcacatc
    29341 cgcgcctgct tcacgcagtt gctccgccat ccaggcggcg ttgtcgtgat cttcctgcaa
    29401 ccgtgcgacg ttatttttca gggcatacat cccggcggca gccagaatcc cggactgacg
    29461 catcccgcca ccggccattt tccgccagcg gatggcacgt ttaatgtaat cacgattacc
    29521 gacgagtaat gaaccgacag gcgtcccaag acctttcgac aggcaaatgg tgaacgaatc
    29581 acaatattgc gtgatctctt tcagttcgca gccgtaagcc accacggcat taaagatgcg
    29641 cgcaccgtca acatgcagcg ccagattgcg ctcgcgggta aattcccatg cttctttcag
    29701 gtattcacgc ggcagcactt tgccgttgtg ggtgttttcc agactgagta atttggtgcg
    29761 ggcgaaatgg atatcgtcgg gtttgatttt catcgccact ttatccagcg gtagcgtgcc
    29821 gtcggcagcc gcgtcgatgg gttgcggctg aatgctgccc agcaccgctg cgccaccggc
    29881 ttcaaacaga tagttatgcg cggcctgacc gacaatatac tcttcgccac gttcgcagtg
    29941 actgagcaga gcgaccaggt tggcctgagt gccggtaggc agaaaaatgg cggcttcttt
    30001 accggaaagc tctgctgcat agtcctgcag agcattaacg gtagggtcgt ctccgtaaac
    30061 gtcgtcccca accggggcgg ccatcatcgc ttcgagcatg gcgcggctcg gtcgggtaac
    30121 ggtatcactg cgtaaatcaa tcatggcatg tccttattat gacgggaaat gccacccttt
    30181 ttaccttagc cagttcgttt tcgccagttc gatcacttca tcgccgcgtc cgctgatgat
    30241 tgcgcgcaac atatacaagc taaatccttt ggcctgttcg agtttgatct gcggtggaat
    30301 ggctaactct tctttggcga ccaccacatc caccagcacc ggaccgtcga tggagaaggc
    30361 gcgttgcagg gcttcatcaa cttcagacgc tttttctaca cggatacccg taatgccgca
    30421 cgcttcggca atgcgggcaa agtttgtgtc gtgtagttcg gtgccgtcag tcaaatagcc
    30481 accagctttc atctccatcg ccacaaagcc cagcacgctg ttgttaaaga cgacaatttt
    30541 cactggcagt ttcatctgca ctactgagag gaaatcgccc atcaacatgc taaaaccgcc
    30601 atcgccgcac atggcgacca cctgacgttc tggctctgtc gcctgcgcac ccagcgcctg
    30661 cggcatggcg ttagccatcg aaccgtggtt aaacgaacct aacaggcgac gcttgccgtt
    30721 catttttaga taacgtgccg cccacaccgt tggcgtacca acgtcacagg tgaaaatagc
    30781 gtcatcggcg gcaaaatgac taatttgctg cgccagatat tgcgggtgaa tggctttctc
    30841 gctcggttta gctaaatcgt ccagcccttt gcgggcgtcg cggtaatctt ccagcgcttt
    30901 atccagaaac ttgcgatcgg ctttttcttc caccaatgga agcaatgcac gcagagtcga
    30961 cttgatatcg ccgaccagtg ccatatccac cttgctgtga gcgccgatgc tggctgggtt
    31021 gatatcaatc tgaatgattt tggcatcggt cgggtagaag gcgcggtagg gaaattgcgt
    31081 gccgagtagc gctaacgtgt cggcgttcat catggtatgg aaacctgacg agaagccgat
    31141 taacccggtc attccaacat catacggatt atcgtattcg acatgttctt taccgcgcag
    31201 ggcatgaaca ataggcgctt taattttccc ggcaaactca actaactctt tatgcgcccc
    31261 cgcgcagccg ctgccacaca tcagggcgat attgctggaa taacgcagca gttgcgccag
    31321 tttgcgtaac tcttcttctt ccggcgtcac gactggttgt ggcgcatgat accagtgcgt
    31381 ggttgcccct tctggcgcag gttttaacgc cacgtcgcct ggtaacacga caaccgaaac
    31441 gccacggtta agcaccgctt tgcgcatggc aatcgccagt acttgtggga tctgctccgg
    31501 gctggaaacc agctcgcaat agtgactaca ttcgcggaat agctcttgtg ggtgggtttc
    31561 ctggaaatag ccgctgccaa tttcgctgga gggaatatga gcggcaatcg ccagtaccgg
    31621 aacgtgattg cggtggcaat caaacaggcc gttgattaag tgcaggttgc cggggccgca
    31681 cgatccggcg cagaccgcca gttctccgct aagttgtgct tcagcgccag cggcaaaggc
    31741 cgccacttct tcgtggcggg tggacatcca ctcgatggtg cccatgcgat taagactgtc
    31801 actaagacca ttcagagagt cgcctgtgac tccccagatg cgtttcaccc ctgccgattc
    31861 gagtgttttg gcgatataag ctgcaaccgt ttgtttcatg gttctccatc tcctgaatgt
    31921 gataacggta acaagtttag ttcatctgac ggagggggaa gggatgggag agaaaggagg
    31981 cactaacggt taaatagccc gatgaaagga atatcatcgg gcataaggcg attatgcgag
    32041 aaccaaatcc ccctgcggat ggcaggagca ggccagtacg taaccttcag cgatttcggc
    32101 gtcggtcagc gtcattgtac tgctcaccgt atattcaccg gaaaccactt ttgtcttaca
    32161 gcagccgcaa acacccgcac ggcaggcagc gacaaccgga acgttattgc tttccagcgc
    32221 ctccagtagc gtggtgccaa ccggggcgta aaattctcgt gccggttgca gtttggtgaa
    32281 tttcagaccg ctggtcgccg cttttgctac tggggtgaag aatttctctt taaagaaacg
    32341 cgtcacgccg agcgctttca cttcctgctc tacccaatcc atatacggag ccgggccgca
    32401 ggtcatcacg gtacgtgaag ctaagtcagg tacacctgcc agcagttctc gagtgagacg
    32461 accagcgata aagccttcgg taacgttatt ttctgccacc agcgttaccg gatagttacg
    32521 ccactcatcg gcgaaaataa catcctgcgg cgtatgcacg ttgtagatca cccgcacatc
    32581 ggcctgtgga cggttcttcg caagccagcg acgcatcgac ataatcggcg tgacgccgca
    32641 gcctgccgcc agcaacagga atttatcttc tgctttatcg tcgcaggtaa attcccccat
    32701 cgcgtccgaa agccagagat aatcaccgcg ttttacatcg cgcgtcagcc actgggagcc
    32761 gacaccgtca tcaatccgcc gcacggtcag ggtgatatat tcactcacgc ctggcgtgga
    32821 ggaaatggtg taagcacgca gcgtttccgc tgagtttcgc acgctgacca gtgcatattg
    32881 cccggcgcga tatgggtagt aatcgtggca aatcagggaa atcgtccaca catccggcgt
    32941 ttcttgcgta atgtgatgaa cctgcatccg ccacgggcat tgattcgttg gcatcgtcat
    33001 cgacaaactc cttacgcgct caacagttgc ttcatgtctt cttcaacagt ggtgatagaa
    33061 cgcaggccga atttctcgtt cagcaccgcc agcaggtctg gtgtcaggaa accaggtgca
    33121 gtcgggccgg tgacgatatt tttcacgccc agagaaagca gcgtcagcag aatgacgatc
    33181 gctttctgtt caaaccagga gagcaccagc gacagcggca gatcgttcac accacagccc
    33241 agtttctctg ccagagtgac agccagaata atcgctgagt aagcatcgtt acattgacct
    33301 gcatctacca gacgcggcag accttcgata tcgccaaact caagtttgtt aaagcgatat
    33361 ttaccacagg cgagggtcag gatcaggcag tcatccggca cgatggtggc gaaatcggtg
    33421 aagtagtggc gctcgccgcg tgcgccgtca cagccaccaa gcaggaagat atgacgcagt
    33481 ttttcacggc tcaccagatc aatcagcgta tcagcagcgc caagcagcgt ctggcgacca
    33541 aaacccacgg tgataaggtg cggaatttcg ctgtacggga agcctgccat ctgttgcgcc
    33601 tgggtgataa ccgcagagaa atcatcaccg tccagatgac gcacgccagg ccagccaaca
    33661 atgctgcggg tccagatacg atcgtcataa gcgcttacgg ttgggtcgat gatgcagttc
    33721 gaggtcatca cgatggggcc agggaaacga gcgaactcca cttgctgatt ctgccagccg
    33781 ctgccgtagt taccgaccag atgcttgaat ttacgcagct ccgggtagcc atgcgcaggc
    33841 agcatttcgc cgtgggtgta gacattaacg cccgtgcctt cggtctgttc cagcaggttg
    33901 tagagatctt tgagatcgtg accggaaatc agaatgcatt tacccgccgt cgctttgacg
    33961 ttgacctggg ttggcgtcgg gtgaccgtat ttaccggttt cgcctgcatc cagaatgctc
    34021 atcactttga agttcatctg gccgatttcc attgaacact caagaagcgc gttcatatcg
    34081 gcaggccagg tccccagcca cgccatgatt ttatggtact gggcataaat atcgttgtcg
    34141 tattgaccga gaacatgcgc gtgttccata taggccgccg cacctttcag gccatacagg
    34201 cacagcagac gcaggccgag aatgttttcg ccaatcgccg ctttatcttt gttaggggta
    34261 aattctgctg cctgacgttg cagctcgccg agatcatcgc tcaccagttg caggtcagcc
    34321 atcgggttat cgacgcgcgc gttggcatct acagccaggc attgtgcttt cagcgcctcg
    34381 cgcaaggcaa tcgcttcacg agcgtagccg acaatacgcg gagaatcgaa gttaacgttg
    34441 gtcagggttg agaaaaaggc acgtggcgcg aagctgtcaa catcgtggtt gatgatgccg
    34501 tattcacgcg cttttaccgc ccaggcagaa agcccttgca gcgccgcgat gagtaaatcc
    34561 tgaaggtcag aagtttccgc cgttttacca cacatcccct gcgcgtatga gcagccgttt
    34621 cctgccggag tacggatagt ttgttcacat tgcacacaaa acatgatcac accttttaaa
    34681 gttatattta atatacatgt ttaaggttaa gacgcttaac gcggggataa aagggatttt
    34741 tcatgcaact ttaagggaga ttgatttagc gcaattttgg cggcagggat ctaccgccag
    34801 agaggtatta cgcagagaaa aaggcgatga ggatcggcac taacaggcta agaataaaac
    34861 cgtgaacaat tgccgccggg accatatcca gcccgccagt acgttgaaga acgggcaggg
    34921 tgaaatccat tgatgtggca ccgcataagc ccagtgcagt agagcggctg cggcgaatca
    34981 gcccagggat caacataata gcaatcagtt cacgggccag atcattaaaa aacgccgcgc
    35041 tcccgattac cggaccaaaa gattcggtca ataaaatacc ggaaagagaa taccagccga
    35101 aaccggaggc cattgccagc gcggtattga tggggagatc aagaataaag gcgttaatta
    35161 aaccaccaat taatgaactg acaaccacca ccacggcgac aatcattccc cggcgattaa
    35221 ggacaatctg ctttaaggtc atgccattat tgcgcaactg aataccaacg aggaaaagta
    35281 gcaaaattaa cgtgtattca ctggcttcgg tcgcgtgttg taagaaagcc agtccactca
    35341 gaccaatggc aaaaccaatc actactacgc cgcacagttt tagcgactcc agcgccatcg
    35401 caatacgcga cgggagtttt tcttgctgat ggtggttgcg ccacggcagg cctcgctcca
    35461 gccacatcag ggcggcaata ttacacagta aaataacggt aatactgacg gcagaataat
    35521 gcagaatcgc caacaggtta ctggcgaggt tatcgagaaa cgccagactg atacccataa
    35581 aaaagagaat aaggtaaacc atccagctta atagctgatt aataactttt aacgcagctt
    35641 gttggcgaag cggaatgagg taacccacaa tcaggggaac cagaatgatt aacagcccag
    35701 aaaacatgaa aacccagtcc ttgcaaagat gaagtcgaaa tgcgcgatga cacactactg
    35761 aaagcggaag gacgagtaaa gttgcaatta aaaggaaatg ttatgcataa ggagcagtag
    35821 agtattcgtt ttcatttaaa gatattcttg cgctttaatt acaaactgca ccgatgttgg
    35881 tggcgtcaaa atcgccgagg cgttccctga aggccggggc agcccacatg gatgtgggct
    35941 gagggcgcgt tttacaggga tgttacctcg cgcccgaccc ggtagccgta agggataagt
    36001 cgagggcacc gcgcagcggc gattttgttc gccagagccc gggggggcag ggggcggcgg
    36061 cgattggccg ccccctgcgc gctccttgcg ccagtggcaa tatgtggctt agctcatgaa
    36121 aggagcgcaa caagatgatg aatcaacata taacaacatc ttaaaaaaag cctgacatta
    36181 cgccaggcct tctgcgttaa ttaatcacgc ttttccagca gggtccggta aatcagacca
    36241 ccgataatgc cgccgacaat tggcaccacc cagaagaacc acagttgttc taatgcccag
    36301 ccgccctgga agatagcaac cgcggtgctg cgcgccgggt taacagaagt gttagtcacc
    36361 ggaatactaa ttaagtgaat cagggttaag gccagaccaa tagcgatcgg cgcaaaacct
    36421 gccggcgcga atttggcggt tgcgccgtgg atcaccaaca ggaaacctgc actcaatacc
    36481 agttcaacta ccagcgcgga aagcatggaa taaccgcctg gtgaatgctc gccataaccg
    36541 ttagaagcaa aaccgctggc tgccgcgtca aaacccgttt taccactggc aattaaatac
    36601 agcagcgccg ctgcaacaat accgccgaca acctgggcaa ttacgtagcc aacgacttct
    36661 tttgccggaa aacgtccgcc agcccataaa ccaatagtga ccgccgggtt aaaatgacca
    36721 ccagaaatat gaccaacagc aaaggccatc gtcagaacgg tcagaccgaa cgccaacgcc
    36781 acgccggcaa aaccaatgcc taattccggg aagcctgcgg ccagtacagc actaccacag
    36841 ccaccaaaaa caagccagaa agtaccaaaa cattcagctg ctaattttct gaacatatcc
    36901 acctcaatta aaaattgacc ctgtgaaaaa tatggtcgtt ttatagggtc gtcgtaaaaa
    36961 aatgacgacg gaaataatgc gcggctattt taaaaacgaa ggcgagtcat tcaccagata
    37021 aataaatcca gtaaatttga tttagggcaa cagcgggttg ccccatatag tcatttgtct
    37081 gattgacagt gtagtgcacg caaaagattt aatcctttag gcgtaataaa aaataatata
    37141 tcatgctaat tatttgattt tgttgttttt gcagacttat cagcaagagg gagtataacg
    37201 cgattattcg ctcatttttc agacatttgc catgcttaaa tgtgatgtca tcacgtatta
    37261 gcaaggcctt tcccgttata ctgccagcgt aaaggataag tcacatattt ctggagggga
    37321 tatgattctt gagcgcgttg aaattgtggg ttttcgcggt atcaaccgtt tgtcgttgat
    37381 gctggaacaa aacaacgtcc tgattgggga gaacgcgtgg ggtaaatcca gcttgctgga
    37441 cgccttaacc ctgctgctat cgccagaatc agatctctac cattttgagc gcgacgattt
    37501 ctggttcccg ccgggagata tcaacgggcg agaacatcat ctgcatatta ttttgacctt
    37561 ccgcgaatcg ctgccaggcc gacatcgggt tcgccgttat cggccgctgg aagcgtgctg
    37621 gacgccatgc accgatggct atcaccgtat tttttatcgt ctggaagggg agagtgcgga
    37681 agacggcagc gtgatgacac tgcgcagttt tctcgataaa gacggacatc cgattgatgt
    37741 cgaggatatt aacgatcagg cacgccatct ggtgcgttta atgccggtgc tgcgcttgcg
    37801 tgatgcccgt tttatgcgcc gtattcgtaa cggcacggtg ccaaatgtcc ctaatgtgga
    37861 agtcaccgcg cgccagctcg atttcctcgc ccgtgagtta tcctcacatc cgcaaaatct
    37921 ctctgatggg cagattcgtc agggactttc cgcaatggta cagctgcttg agcattattt
    37981 ctctgagcag ggggccggac aggcgcgata tcgtttaatg cggcggcggg ccagcaatga
    38041 gcaacgaagc tggcgctatc tggacatcat caaccggatg attgaccgac ctggagggcg
    38101 ctcgtatcgg gttattttgc tcggcctgtt tgctacttta ttgcaggcaa aaggcacatt
    38161 gagactggat aaagacgcgc gtccattgtt gctgatcgaa gatccagaaa cccgtttaca
    38221 ccccattatg ctttcagttg cctggcatct gttgaatctt ctgccattgc agcgcattgc
    38281 caccaccaac tcgggtgagt tgctttcgtt aacgccggta gagcatgttt gccgactggt
    38341 acgtgagtcc tcgcgcgttg ccgcctggcg tctggggccg agtggcttga gtaccgaaga
    38401 tagccgacgc atatcctttc acattcgttt taaccgtccg tcatcgctgt ttgcacgctg
    38461 ctggttgctg gtggaagggg aaacggaaac ctgggttatc aatgaactgg cgcgtcagtg
    38521 cggacatcat tttgatgccg aagggatcaa ggtcattgag tttgcccagt ccgggctaaa
    38581 gccactggtt aaatttgccc gccgaatggg gattgaatgg catgtactgg tcgatggcga
    38641 tgaagcaggg aagaaatatg ccgctacggt acgcagcctg ttgaataacg atcgggaagc
    38701 cgaacgagaa catttaacgg cgttaccggc gctggatatg gaacatttta tgtatcgcca
    38761 gggattttcc gatgtgttcc accgcgtggc gcaaatcccg gaaaatgtac cgatgaatct
    38821 acgcaaaatt atctcgaaag cgatccatcg ctcttccaaa cccgatcttg ccattgaagt
    38881 ggcaatagag gcaggacgtc gtggtgtgga ctccgtaccg acgctgctga aaaaaatgtt
    38941 ctcacgcgtg ctgtggctgg cgcgcggtcg cgcggattaa ccgcgaaaca tcgtggccat
    39001 ttgtggctga atagcgtcga gcatctcata gcgccgacgg tattcagccc gttttttact
    39061 ggcgatttcg gcaatctctt ttcgtgctat ctgtgctgga aggcggtaat ggcgttcagc
    39121 atcacatacg ccgccaaccg attcccagaa agcgttgtaa tcagcgtgga tcttgccttc
    39181 tttatcgcga taacgcaggc tgcggtaaat atgcgtttca ttgctgacgg caataatctg
    39241 ctctacctgc aaacgttggg caaacagaca ggccgcttcc atcacgaggc gtttgggaaa
    39301 tagcccgtgg caggctttcg tcgcattctg gatttcctga tgtggaattt cccattttgc
    39361 gccttgcagt ccgccaataa acatcgttct tttcccctga tattcacaca gggtaaacgt
    39421 gatctctgcc agaggaatac cttcgctgtt gcgaaacagg attgtgctgt caccttcttt
    39481 atccattgag atcatcatgg tcagcttaag cgtgaactgc tcgccgtttt tgccttccag
    39541 cttcgccagt tgcagcccgg gggtattcaa atataagctg aattcttccg ccgacataca
    39601 tccgcggagt aacgcataat ggtaacgtaa cgcctccagc aattgcttac ggctaagatt
    39661 cgccgcaagg taagggcgat gcagacgcac aggcagtcgc ggctggcgcg ttaacaacac
    39721 attgagatta ggccagtggg aaagttcgtt catccactca acgcttaaac gcggcataat
    39781 caacgagcgc agcaaaaatt tctggcgaaa actacggcga tgccagaatt tacccggccg
    39841 acactgtcca cgtgccagac taagaaaaag tgacaggctg ctgagagatt cagatggcgt
    39901 aaaggtccgt tcagttagct gcgacatatt catgaaatca ttggttatac atgacgtcga
    39961 tttcaccatt gcgtatctta accaaacatc aatagtgtga ttactaacgt aaattttagg
    40021 gttttgttga tatttcgttg aagttaatga cccggattgg catatggagt attcagaata
    40081 tttatgaaaa agcggaaaac cgtgaagaag cgttacgtta ttgcgctggt gatagtcatc
    40141 gccggactga ttacgttatg gagaattctt aacgcacccg tgccgactta tcagacactg
    40201 attgtgcgcc ccggtgattt acagcaaagc gtgctggcga ccggaaagct ggacgcgctg
    40261 cgtaaggttg atgtgggcgc gcaggtcagc ggtcagttga aaactctgtc ggtggcgatt
    40321 ggcgataaag taaaaaaaga ccagctttta ggggttattg atcctgaaca ggctgaaaac
    40381 cagattaagg aggtcgaagc aacgctgatg gagctacgtg cgcagcggca gcaggcggaa
    40441 gcggagctga aactggcgcg ggtgacgtat tcccgtcagc aacgtctggc acaaacgcag
    40501 gcggtttcac agcaggatct cgacaccgcc gcgacggaga tggctgtgaa acaggcgcaa
    40561 attggcacca ttgacgcgga aatcaagcgc aatcaggctt ctctcgatac ggctaaaacc
    40621 aatctcgatt acactcgcat cgttgccccg atggccgggg aagtcacgca aatcaccact
    40681 ctgcaaggcc agacggtgat tgccgcacaa caagcaccga acattctgac gctggcagat
    40741 atgagcacca tgctggtaaa agcgcaggtt tctgaagcgg atgtaatcca cctgaagccg
    40801 gggcaaaaag cttggtttac ggtgcttggc gatccactga cgcgctacga ggggcaaatc
    40861 aaggatgtac taccgacgcc ggaaaaggtt aacgacgcta ttttctatta cgcccgtttt
    40921 gaagtcccca accccaatgg tttgctgcgg ctggatatga ctgcgcaagt gcatattcag
    40981 ctcaccgatg tgaaaaatgt gctgacgatc cctctgtcgg cgttaggcga tccggttggc
    41041 gataatcgtt ataaagtcaa attgttgcgt aatggtgaaa cacgcgagcg tgaagtgacg
    41101 attggcgcac gtaacgatac cgatgttgag attgtcaaag ggctggaagc gggcgatgaa
    41161 gtggtgattg gtgaggccaa accaggagct gcacaatgac gcctttgctc gaattaaagg
    41221 atattcgtcg cagctatcct gccggtgatg agcaggttga ggtgctgaag ggcatcaccc
    41281 tcgatattta tgccggtgag atggtagcga ttgttggcgc ttcaggttcc ggtaaatcga
    41341 ccctgatgaa tattctcggc tgtctggata aggccaccag cggcacctat cgcgtcgccg
    41401 gtcaggatgt tgccacactg gacgccgatg cgctggcgca actgcgccgc gagcatttcg
    41461 gctttatttt ccagcgttac catttacttt cgcatttaac cgccgagcag aacgttgaag
    41521 tacccgccgt ctatgccggt cttgagcgga aacagcggct gcttcgcgcc caggagttac
    41581 tgcaacgact ggggctggaa gaccgtacag agtattatcc ggcacagctt tcgggtggtc
    41641 agcaacagcg cgtcagcatc gcgcgggcat tgatgaacgg cggtcaggta attcttgccg
    41701 atgaaccaac cggcgcactg gacagccatt ctggcgaaga ggtgatggcg atcctgcatc
    41761 agctgcgcga tcgcgggcat atggtgatta tcgtcaccca cgatccgcag gtcgctgctc
    41821 aggccgagcg ggtgatcgaa attcgcgacg gcgaaattgt gcgcaatcct cccgccattg
    41881 aaaaagtgaa tgttgctggc gggacggagc ctgttgtcaa cacggtgtct ggctggcggc
    41941 agtttgtcag cggttttaac gaggcgctga cgatggcatg gcgggcgctg gcagcgaata
    42001 aaatgcgtac tttactgacc atgctgggga ttattatcgg tattgcgtcg gtggtttcca
    42061 ttgtcgtggt gggtgacgcc gccaaacaaa tggtgctggc ggatattcgt tctattggta
    42121 cgaatactat tgatgtctat cccgggaaag attttggcga tgacgatccg caatatcagc
    42181 aggcgctgaa gtacgacgac ttaatcgcca tccaaaaaca accgtgggtc gcctcagcca
    42241 cacctgccgt ctcgcaaaac ctgcgcctgc gttataacaa tgttgatgtt gctgccagtg
    42301 ccaatggcgt gagcggcgat tattttaatg tctatggcat gaccttcagt gaaggaaaca
    42361 cctttaatca ggagcagctg aacggtcgtg cgcaggtcgt ggttctcgac agtaatactc
    42421 gccgccagct tttcccccat aaagcagatg tggttggcga ggtgattctg gtcggcaata
    42481 tgcccgccag agtcattggt gtggcggaag aaaaacagtc gatgtttggt agcagtaaag
    42541 tgctgcgtgt ctggctacct tacagcacga tgtccgggcg agttatgggc cagtcgtggc
    42601 tgaactccat tactgtcagg gtaaaagaag gatttgacag cgccgaggcg gaacagcaac
    42661 tcacgcgttt actttcactg cgccacggaa agaaggattt ctttacctgg aacatggacg
    42721 gcgtcttgaa aactgttgaa aagaccacac gtactttaca actgtttctg acgctggtgg
    42781 cggtgatttc gctggtggtg ggcggtattg gtgtaatgaa tattatgctg gtgtcagtga
    42841 ccgagcggac gcgggaaatt ggcattcgca tggctgtagg tgcgcgagca agcgatgttt
    42901 tgcaacagtt cctgatcgaa gccgtactgg tttgcttggt cggtggcgcg ttgggaataa
    42961 cgctgtcact gttaattgct ttcaccttgc agcttttctt acccggctgg gagattggtt
    43021 tttcaccgtt ggcactgctg ctggcgtttc tctgctcgac ggccaccggg attttatttg
    43081 gatggttacc cgcacgaaat gcggcacgac tggatccagt agatgctctg gtacgagagt
    43141 aatttttgag ataaaaatgc cagccgatcg ggctggcatt ttgcctttag gatgtacaca
    43201 atgagacaga agagctatgc gactgccgct tctacttcga cgggcacaat aacactggcg
    43261 tgattgcctt ttggcccctg gtggacatca aactgaacgg attgtccagc ttttagcgtt
    43321 ctgtaaccat ccatctgaat ggtggaataa tgagcgaaaa tatcttcgcc gccgccttca
    43381 gggcagatga aaccaaaccc tttggcattg ttgaaccact taacagtacc cttttccatg
    43441 cttcgacatc cttcgcaaat cttatacaag taagatggaa taaaccgggg tcagagaggg
    43501 ggctgttcaa aacctcgcca actctagaaa tacaatttag agaattaggg cgagccgtca
    43561 agcgtttgac aggggccagg gggcaggtat gaatcaaaaa tttgaagcag ttaacgctat
    43621 tgacaggaat gtgacagatg tcgctgatgc caacgataga tgatagttat ctatcatgtg
    43681 gagtagattg gtcaggcaaa taagctcttg tcagcggcag ggcgttctgc cgataaccgt
    43741 aaccgaagat gataactgac aatgggtaaa acgaacgact ggctggactt tgatcaactg
    43801 gcggaagaaa aagttcgcga cgcgctaaaa ccgccatcta tgtataaagt gatattagtc
    43861 aatgatgatt acactccgat ggagtttgtt attgacgtgt tacaaaaatt cttttcttat
    43921 gatgtagaac gtgcaacgca attgatgctc gctgttcact accaggggaa ggccatttgc
    43981 ggagtcttta ccgccgaggt tgcagaaacc aaagtggcga tggtgaacaa gtacgcgagg
    44041 gagaatgagc atccattgct gtgtacgcta gaaaaagcct gaatgcaggc ataaaaattg
    44101 ggggaggtgc ctatgctcaa tcaagaactg gaactcagtt taaatatggc tttcgccaga
    44161 gcgcgcgagc accgtcatga gtttatgacc gtcgagcact tgttactggc gctgctcagt
    44221 aacccatctg cccgggaggc gctggaagcg tgttctgtgg atttggttgc gctccgtcag
    44281 gaactggaag cctttattga acaaaccaca cccgttctgc ctgccagtga agaggagcgc
    44341 gacacacagc cgacgctgag ttttcagcgt gtactgcaac gtgcggtctt ccatgtccag
    44401 tcctccggtc gcaatgaggt aaccggtgca aacgttctgg tcgctatctt tagcgaacag
    44461 gagtcgcagg cggcatatct gttgcgtaaa catgaagtca gccgtctcga tgtggtgaac
    44521 tttatctctc atggcacgcg taaagacgag ccgacacagt cttctgatcc tggcagccag
    44581 ccaaacagcg aagaacaagc tggtggggag gaacgtatgg agaatttcac gacgaacctg
    44641 aatcagcttg cgcgcgtggg cggaatcgac ccactgattg gtcgtgagaa ggagctggag
    44701 cgtgctattc aggttctctg ccgtcgccgt aaaaacaacc cgctgctggt gggggaatct
    44761 ggtgtcggta aaaccgcgat tgcggaaggt cttgcctggc gaattgttca gggcgatgtg
    44821 ccggaagtga tggctgactg tacgatttac tctctcgata tcggttctct gttagcgggc
    44881 actaaatatc gcggcgactt tgaaaaacgt tttaaagcgt tgctcaagca gctggagcag
    44941 gacactaaca gcatcctgtt tattgatgag atccacacca ttatcggtgc gggtgcagcg
    45001 tctggtggcc aggtcgatgc ggctaacctg atcaaaccgt tgctctccag cggtaaaatt
    45061 cgcgtaattg gttcgacaac ctatcaggag ttcagcaaca ttttcgagaa agaccgtgct
    45121 ctggcgcgtc gcttccagaa aattgatatt actgaaccgt cgatcgaaga aactgttcaa
    45181 atcatcaatg gcctgaaacc gaagtatgaa gcgcaccacg acgtgcgtta taccgcaaaa
    45241 gcggtgcgtg cagcggtaga gctggcggtg aaatacatta acgatcgtca tctgccggat
    45301 aaagccattg acgttatcga cgaagcgggc gctcgcgcac gcctgatgcc ggtaagcaaa
    45361 cgcaagaaaa ccgttaatgt ggcggatatt gagtccgtgg tggcccgtat tgcgcgcatt
    45421 ccagagaaga gtgtttctca gagtgaccgc gataccctga aaaacctcgg cgatcgcctg
    45481 aaaatgctgg tcttcggtca ggataaagcc attgaggcgc tgactgaagc cattaagatg
    45541 gcgcgtgcag gtttaggtca cgaacataaa ccggttggtt cgttcctgtt tgccggccct
    45601 accggggtcg ggaaaacaga ggtgacggta cagctttcga aagcgttggg cattgagctg
    45661 ctgcgctttg atatgtccga gtatatggaa cgccataccg tcagccgtct gattggtgcg
    45721 cctccgggat acgttggttt tgatcaggga ggtttgctga ctgatgcggt catcaagcat
    45781 ccacatgcgg tgctgttgct ggacgaaatc gagaaagcgc atccggacgt gttcaatatt
    45841 ctgttgcagg tgatggacaa cggtacgctg accgataaca acggacgcaa agcggacttc
    45901 cgtaacgtgg tgctggtgat gaccaccaac gccggggtac gtgaaactga gcgtaaatcc
    45961 attggtctta tccaccagga taacagcacc gatgcgatgg aagagatcaa gaagatcttt
    46021 acaccggaat tccgtaaccg tctcgacaac attatctggt tcgatcatct gtcaactgac
    46081 gtgatccatc aggtggtgga taaattcatc gtcgagttgc aggttcagct ggatcagaaa
    46141 ggtgtttctc tggaagtgag ccaggaagcg cgtaactggc tggccgagaa aggttacgac
    46201 cgggcaatgg gcgcacgtcc gatggcgcgt gtcatccagg acaacctgaa aaaaccgctc
    46261 gccaacgaac tgctgtttgg ttcgctggtg gacggcggtc aggtcaccgt cgcgctggat
    46321 aaagagaaaa atgagctgac ttacggattc cagagtgcac aaaagcacaa ggcggaagca
    46381 gcgcattaat ctgattgtta ggtaggttgg tcaagtccgt aatctcgaaa gaggttacgg
    46441 actttttgtt tatggggtgg aggaggttca gacccttttt ttaatgatga tggtaagttg
    46501 ttgataatta gtgctgcggg aaggtaagga taaaaaaggg tgctgcagga gaatgggatg
    46561 gttttgcttt atttacaacg ggctaaacgt gtagtatttg agttcactgc cgtacaggca
    46621 gcttagaaat tcacaggtaa catactccac ccgcccacca tgttcactgc cgtacagaca
    46681 gataaaatgc gaaaaaaaag ctcgcacttt cgtacgagct cttctttaaa tatggcggtg
    46741 agggggaccg cctgaaataa atctgactta atccaggggt gttatataat ttctttataa
    46801 acaatgtatt acactttttg ttgtccgatg ttatctaatg tattcttagt gaagcgaggg
    46861 actaatggca tactggatgg cataccagag tgacgggaat tagcgtatgg cagtattgac
    46921 ggatacgaaa gcaagacata t
//
LOCUS       DADKRT010000007        43882 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.007, whole genome shotgun sequence.
ACCESSION   DADKRT010000007 DADKRT010000000
VERSION     DADKRT010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 43882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43882
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.007"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            86..610
                     /gene="lpfE"
                     /locus_tag="JQ356_000365"
     CDS             86..610
                     /gene="lpfE"
                     /locus_tag="JQ356_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000831418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long polar fimbrial protein LpfE"
                     /protein_id="HAY4620562.1"
                     /translation="MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELV
                     KDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFA
                     LDAGGATGVGLKIKTAAGVQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATI
                     GRADATVDFTVQYE"
     gene            863..2554
                     /gene="eptB"
                     /locus_tag="JQ356_000366"
     CDS             863..2554
                     /gene="eptB"
                     /locus_tag="JQ356_000366"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418002.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HAY4620563.1"
                     /translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
                     GVSAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
                     LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
                     ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
                     AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
                     YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
                     ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
                     QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
                     AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN"
     gene            2646..2722
                     /locus_tag="JQ356_000367"
     tRNA            2646..2722
                     /locus_tag="JQ356_000367"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2680..2682,aa:Pro,seq:cgg)
     gene            3493..3723
                     /locus_tag="JQ356_000368"
     CDS             3493..3723
                     /locus_tag="JQ356_000368"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620564.1"
                     /translation="MLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTY
                     DASSVPLYNRLVEFKIGTTEVIPGLAEKWEVS"
     gene            3733..5073
                     /locus_tag="JQ356_000369"
     CDS             3733..5073
                     /locus_tag="JQ356_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001488423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY4620565.1"
                     /translation="MYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYH
                     KVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYA
                     DAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPD
                     ASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDV
                     KVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKE
                     AGLEKGFSIDLWAMPVQRPYNPNARCMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKD
                     GEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHN
                     KRVELYKQSQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE"
     gene            5381..6400
                     /gene="dppB"
                     /locus_tag="JQ356_000370"
     CDS             5381..6400
                     /gene="dppB"
                     /locus_tag="JQ356_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HAY4620566.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
                     GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPASGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            6410..7312
                     /gene="dppC"
                     /locus_tag="JQ356_000371"
     CDS             6410..7312
                     /gene="dppC"
                     /locus_tag="JQ356_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HAY4620567.1"
                     /translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
                     IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDMLSRLMYGARLSL
                     LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
                     IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
                     LIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
                     LLTVLAFNLMGDGLRDALDPKLKQ"
     gene            7323..8306
                     /gene="dppD"
                     /locus_tag="JQ356_000372"
     CDS             7323..8306
                     /gene="dppD"
                     /locus_tag="JQ356_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HAY4620568.1"
                     /translation="MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
                     EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
                     KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
     gene            8303..9307
                     /gene="dppF"
                     /locus_tag="JQ356_000373"
     CDS             8303..9307
                     /gene="dppF"
                     /locus_tag="JQ356_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP binding subunit
                     DppF"
                     /protein_id="HAY4620569.1"
                     /translation="MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
                     IKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
                     "
     gene            complement(9337..10608)
                     /locus_tag="JQ356_000374"
     CDS             complement(9337..10608)
                     /locus_tag="JQ356_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HAY4620570.1"
                     /translation="MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
                     KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
                     LMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLF
                     KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
                     VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
                     EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
                     DTKKINSRMLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
                     AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
     gene            11084..11191
                     /locus_tag="JQ356_000375"
     CDS             11084..11191
                     /locus_tag="JQ356_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HAY4620571.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(11278..12957)
                     /gene="bcsG"
                     /locus_tag="JQ356_000376"
     CDS             complement(11278..12957)
                     /gene="bcsG"
                     /locus_tag="JQ356_000376"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HAY4620572.1"
                     /translation="MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
                     LLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFS
                     TDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS
                     LWPAGQPTTTVTTTGGNAAATVETTGGAPVVGDMPAQTTPPTTANLNAWLNNFYNAEA
                     KRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATS
                     YSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLK
                     EVRENGGMQTELMDQTNLPVILLGFDGSPVYDDTTVLNRWLDVTEKDKNSRSATFYNT
                     LPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGD
                     RMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIDQPSSFLAISDLVVRVLDGK
                     IFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
     gene            complement(12954..13145)
                     /gene="bcsF"
                     /locus_tag="JQ356_000377"
     CDS             complement(12954..13145)
                     /gene="bcsF"
                     /locus_tag="JQ356_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HAY4620573.1"
                     /translation="MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPR
                     YVKPAGTLRRTEKARATKK"
     gene            complement(13142..14713)
                     /gene="bcsE"
                     /locus_tag="JQ356_000378"
     CDS             complement(13142..14713)
                     /gene="bcsE"
                     /locus_tag="JQ356_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HAY4620574.1"
                     /translation="MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLAN
                     QTIASQAETAHVAVISMDSDPAKIFQLDDYQGPEKIKLFSMLNHEKGLYYLTRDLQCS
                     IDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSL
                     LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAE
                     IQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQI
                     EPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTM
                     IESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGV
                     LVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLP
                     TGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRI
                     PEPMRLLDDAVERSS"
     gene            14986..15174
                     /locus_tag="JQ356_000379"
     CDS             14986..15174
                     /locus_tag="JQ356_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620575.1"
                     /translation="MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQ
                     LAAALKRWPLLAEFAQQK"
     gene            15186..15938
                     /gene="bcsQ"
                     /locus_tag="JQ356_000380"
     CDS             15186..15938
                     /gene="bcsQ"
                     /locus_tag="JQ356_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HAY4620576.1"
                     /translation="MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLL
                     RLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRL
                     SDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQ
                     ALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEY
                     RSDALAAEEILTLANWCLLNYSGLKTPVGSAS"
     gene            15935..18553
                     /gene="bcsA"
                     /locus_tag="JQ356_000381"
     CDS             15935..18553
                     /gene="bcsA"
                     /locus_tag="JQ356_000381"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417990.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HAY4620577.1"
                     /translation="MSILTRWLLIPPVNARLIGGYRDYRRHGASAFSATLGCFWMILA
                     WIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGTSRKETPKPR
                     RRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSL
                     ILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRY
                     TSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVD
                     IFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIART
                     THEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHF
                     FSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIA
                     VETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLD
                     NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFV
                     LPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGG
                     LVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVL
                     GGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQIL
                     EGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWAL
                     WQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFILRRP
                     ERSETAQPSDQALAQQ"
     gene            18564..20902
                     /gene="bcsB"
                     /locus_tag="JQ356_000382"
                     /pseudo
     CDS             18564..20902
                     /gene="bcsB"
                     /locus_tag="JQ356_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417989.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
     gene            20909..22015
                     /gene="bcsZ"
                     /locus_tag="JQ356_000383"
     CDS             20909..22015
                     /gene="bcsZ"
                     /locus_tag="JQ356_000383"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HAY4620578.1"
                     /translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
                     PSDARKITTFEGQSYGMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
                     NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
                     SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
                     PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
                     KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
                     VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
     gene            21997..25470
                     /gene="bcsC"
                     /locus_tag="JQ356_000384"
                     /pseudo
     CDS             21997..25470
                     /gene="bcsC"
                     /locus_tag="JQ356_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026226.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
     gene            25552..27540
                     /gene="hmsP"
                     /locus_tag="JQ356_000385"
     CDS             25552..27540
                     /gene="hmsP"
                     /locus_tag="JQ356_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HAY4620579.1"
                     /translation="MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIP
                     ERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLV
                     TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIIT
                     CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA
                     ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK
                     NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ
                     QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL
                     MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF
                     GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVE
                     TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK"
     gene            27723..29009
                     /locus_tag="JQ356_000386"
     CDS             27723..29009
                     /locus_tag="JQ356_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HAY4620580.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
                     AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPVSVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
                     LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
                     VLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
     gene            29229..30725
                     /locus_tag="JQ356_000387"
     CDS             29229..30725
                     /locus_tag="JQ356_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY4620581.1"
                     /translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
                     QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
                     QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
                     QSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
                     TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
                     IMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
                     QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
                     DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
                     QPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDIPPAQ"
     gene            complement(30821..31750)
                     /locus_tag="JQ356_000388"
     CDS             complement(30821..31750)
                     /locus_tag="JQ356_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417983.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY4620582.1"
                     /translation="MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPA
                     ALTVHYVTALGTDSFSQQMLDAWHGENVDISLTQRMENRLPGLYYIETDSTGERTFYY
                     WRNEAAAKFWLESEQSTAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANG
                     GKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTH
                     NAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT
                     GGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
     gene            31982..32749
                     /gene="pdeH"
                     /locus_tag="JQ356_000389"
     CDS             31982..32749
                     /gene="pdeH"
                     /locus_tag="JQ356_000389"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417982.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HAY4620583.1"
                     /translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
                     MAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLA
                     SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLGDF
                     GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
                     TPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL"
     gene            32819..34879
                     /locus_tag="JQ356_000390"
     CDS             32819..34879
                     /locus_tag="JQ356_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY4620584.1"
                     /translation="MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSA
                     ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFG
                     LKAQGRYNGEQLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGG
                     VDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGD
                     SDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKS
                     VQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQP
                     LKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAE
                     LRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILS
                     QMKK"
     gene            complement(35113..36435)
                     /locus_tag="JQ356_000391"
     CDS             complement(35113..36435)
                     /locus_tag="JQ356_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY4620585.1"
                     /translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
                     AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
                     TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
                     LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
                     LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
                     AAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLLILFALF
                     AFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSI
                     LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETQHQSL"
     gene            complement(36846..37859)
                     /gene="yhjD"
                     /locus_tag="JQ356_000392"
     CDS             complement(36846..37859)
                     /gene="yhjD"
                     /locus_tag="JQ356_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HAY4620586.1"
                     /translation="MTQENEIKRPTQDLELEPIKQLDNSEKGGKVSQALETVTTTAEK
                     VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
                     LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAI
                     RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
                     LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
                     KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMLGK
                     TQP"
     gene            complement(37908..38879)
                     /locus_tag="JQ356_000393"
     CDS             complement(37908..38879)
                     /locus_tag="JQ356_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4620587.1"
                     /translation="MLEKTINNAICALLFRCEQQSVKEMDKIHAMQLFIKVAELESFS
                     RAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLNE
                     LDGLFQQDATSISGKLRIDIPPGIAKNLLLPRLSEFLYLHPGIELELSSHDRPVDILH
                     DGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTP
                     HLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLAAGLAGLGIIQIPRIAVREALRA
                     GRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEHLD"
     gene            39327..39929
                     /locus_tag="JQ356_000394"
     CDS             39327..39929
                     /locus_tag="JQ356_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY4620588.1"
                     /translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
                     YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
                     RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
                     EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
     gene            complement(39980..41629)
                     /gene="treF"
                     /locus_tag="JQ356_000395"
     CDS             complement(39980..41629)
                     /gene="treF"
                     /locus_tag="JQ356_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreF"
                     /protein_id="HAY4620589.1"
                     /translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVKRY
                     LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
                     ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLI
                     EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
     gene            42033..43430
                     /gene="ccp"
                     /locus_tag="JQ356_000396"
     CDS             42033..43430
                     /gene="ccp"
                     /locus_tag="JQ356_000396"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HAY4620590.1"
                     /translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
                     SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
                     LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
                     SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSW
                     DEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
                     LTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKE
                     ERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFL
                     HSLNGVYTPYMQDKQ"
     gene            43641..>43882
                     /locus_tag="JQ356_000397"
     CDS             43641..>43882
                     /locus_tag="JQ356_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY4620591.1"
                     /translation="MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT        10540 a        11002 c        11926 g        10414 t
ORIGIN      
        1 atcccgttag cactaccgga aaattacccg ctgccgggga ttatagcggt attgctacca
       61 tacatgtcga actggagtaa cagtcatgaa gcgaacaata cttgcgttat gcctgctgcc
      121 tctttccttt tcgtcattcg cggcaaccac ggatttaggg ccgaaaggaa cattgaaatt
      181 cacccttaaa atcagccagg gtgcttgcga actggtgaaa gacagcgttg aggttgacat
      241 gggcaccgcg gttctcaaaa agccggtaag aatcggaacg gaaattaatc ccactccttt
      301 ttccatcggc ctgaaaaact gtagcgaagt ggtcagagcc tacgtgacta tggacggtac
      361 acccaatgca gacgactcaa atctttttgc gctggatgcg ggtggcgcta caggcgttgg
      421 gctgaaaatc aaaaccgctg ctggagtaca acagttcccg gaaaatacaa cgccgacacc
      481 ggttgagttt gcaattaacg gtgatggcgc acatcaactg aactatatcg ccagctacgt
      541 gcctattcgc gccgatgcaa ctattggtcg cgcagatgca acggtcgact ttactgtaca
      601 gtacgaataa tttcacatct taagggccag ttaactggcc ctttttactg ctttttgtaa
      661 cgctaaagtc tcttttcaaa cttgcatttt tgtaaatttg tgcttcatgc acactctttc
      721 cccacacttt ttcgctttgc tgtggtctac ttattcgcgc gtgtagattt tacttatctg
      781 actacctccg cacttttccc ctgccgggcc tgaaaagccg ctaagcaggg tgttatcacc
      841 tgtttgtcca gggtttgttt gcatgagata catcaaatcg attacacagc agaagctgag
      901 ctttttgctt gcaatctata ttggcctttt tatgaatggc gcggtttttt atcgccgctt
      961 cggcagctat gcgcacgatt ttaccgtctg gaaaggcgtt tctgctgttg ttgaactggc
     1021 cgccaccgta ctggtgacct tctttttact acgtcttcta tcgctgtttg gccgccgcag
     1081 ctggcgtatt ctggcgtcgc tggtggtgct cttttccgca ggtgccagct attacatgac
     1141 cttccttaat gtggtcattg gttatggcat catcgcttcc gtcatgacca ccgatatcga
     1201 cctgtcaaaa gaagttgttg gtctgaactt tattctctgg ttaatcgccg ttagtgcatt
     1261 gcctcttatc cttatctgga ataaccgctg tcgctacacc ttgctccgac aactgcgaac
     1321 cccagggcag cgtattcgca gcctggcggt cgtcgtactg gcgggtatta tggtttgggc
     1381 accgattcgt ttgctggata tccagcagaa gaaagtggag agggcgaccg gcgttgattt
     1441 gccgagttat ggcggtgtcg tagcgaactc ttatctgcca tcaaactggc tttctgcgtt
     1501 ggggctgtat gcctgggcgc gggtcgatga atcttccgat aataattcat tgcttaatcc
     1561 ggcgaagaag tttacatacc aggctccaca aaacgttgat gatacttatg tcgtgtttat
     1621 catcggtgaa accacgcgtt gggaccatat gggtattttc ggctatgagc gtaataccac
     1681 gccgaaactg gcccaggaga aaaatctggc ggcgttccgt ggttactcct gtgataccgc
     1741 aaccaaactc tcactgcgtt gcatgtttgt acgtcagggg ggcgcggaag ataatccgca
     1801 gcgcacatta aaagaacaga acattttcgc ggttctgaag cagttaggat tcagttctga
     1861 cctctacgct atgcagagcg aaatgtggtt ctacagcaac acgatggcgg acaacattgc
     1921 ttatcgtgag cagattggtg cggagccacg taatcgtggc aagccggtag atgatatgtt
     1981 gctggtagac gaaatgcagc aatcgctagg gcgcaacccg gatggtaagc atctgatcat
     2041 tctgcatacc aaaggttcgc attttaacta cacccagcgt tatccgcgta gcttcgcgca
     2101 gtggaagccg gaatgtattg gtgttgatag cggctgtacc aaagcgcaga tgatcaactc
     2161 ctatgacaac tcggtgacct atgtggatca ctttatctcc agcgtgattg atcaggttcg
     2221 cgataagaaa gcgattgtgt tctacgcagc tgaccacggt gagtcaatta atgaacgcga
     2281 gcacctgcac ggcacgccgc gtgaattggc accgccggag cagttccgcg taccgatgat
     2341 ggtctggatg tcagataaat atctggaaaa tccggccaat gcgcaggcat ttgcgcagct
     2401 gaaaaaagaa gccgacatga aagtgccacg ccgtcacgta gagctgtacg ataccatcat
     2461 gggttgtctt ggctatactt caccggatgg tggaattaac gaaaacaaca actggtgtca
     2521 catcccgcag gcaaaagagg cagcggctaa ctaagcggcc tgctgacttt ctcgccgatc
     2581 aaaaggcatt ttgctattaa gggattgacg agggcgtatc tgcgcagtaa gatgcgcccc
     2641 gcattcggtg attggcgcag cctggtagcg cacttcgttc gggacgaagg ggtcggaggt
     2701 tcgaatcctc tatcaccgac caaattcgaa aagcctgctc agcgagcagg cttttttgca
     2761 tttgaagccc atgaggatga gaacctccgg gggctgggag gttcgactcg acgtaggcct
     2821 gataagacgc gccagcgtcg catcaggcaa cggcaccgca cttattgtcg gatgcggcgc
     2881 gaccgcctta ttcgaccaac acaccacaca ttttcctgcc aactttgcgc cccatatctc
     2941 actatccatt aacggatttg tgacagaaac cattgtcttt ttttatattt gcttaaatct
     3001 ttttttgcgt tacttatggc tggcgctggc attttccgct gtgcgtttta gcgttcatgg
     3061 tattaatcgc tcagatatcc accttttcct cagatttttt tcattaaatg cataaaactt
     3121 aatcaccaaa tgttgctaaa tattaagctg attgttctgg ttatgttgga gtagcacaaa
     3181 tttctctgct gcaaatagct gtttgaagtt ttttaatctt tgtttgtggg ttctcaccgt
     3241 tggtgtaaat cccggttggc tgtattgacg ttttcacatt ctgttgacag attgtaggtc
     3301 acgaggggca ttttatggag gatccgcact gttacactga tgttaattag tacggcatcc
     3361 ccacctcata acgttgaccc gaccgggcaa aaaacaaaaa aggtcaggta gcgacaaccc
     3421 actgcaaagg gttaaaacaa caaacatcac aattggagca gaataatgcg tatttccttg
     3481 aaaaagtcag ggatgctgaa gcttggtctc agcctggtgg ctatgaccgt cgcagcaagt
     3541 gttcaggcta aaactctggt ttattgctca gaaggctctc cggaagggtt taacccgcag
     3601 ctgtttacct ccggcaccac ctatgacgcc tcttccgtac cgctttataa ccgcctggtt
     3661 gaatttaaaa tcggcaccac tgaagtgata ccgggcctcg ctgaaaagtg ggaagtcagc
     3721 taagacggta aaatctatac cttccatctg cgtaaaggtg tgaagtggca cgacaataaa
     3781 gaattcaaac cgacgcgtga actgaacgcc gatgacgtgg tgttctcgtt cgaccgtcag
     3841 aaaaacgcgc aaaacccgta ccataaagtc tctggcggca gctacgaata cttcgaaggc
     3901 atgggcttgc cggagctgat cagtgaagtg aaaaaggtgg acgacaacac agttcagttc
     3961 gtactgactc gcccggaagc gccgttcctc gctgatctgg caatggactt cgcctctatt
     4021 ctgtcaaaag aatatgctga tgcgatgatg aaagccggta caccggaaaa actggacctc
     4081 aacccaatcg gaaccggtcc gttccagtta cagcagtacc aaaaagattc ccgtatccgc
     4141 tacaaagcgt ttgatggcta ctggggcacc aaaccgcaga tcgatacgct ggtcttctct
     4201 attacccctg atgcttccgt gcgttacgcg aaattgcaga agaatgaatg ccaggtgatg
     4261 ccgtacccga acccggcaga tatcgctcgc atgaagcagg ataaatccat caacctgatg
     4321 gaaatgccgg ggctgaacgt cggctacctc tcgtataacg tgcagaaaaa accgctggat
     4381 gacgtgaaag ttcgccaggc actgacctac gcggtgaaca aagacgcgat catcaaagcg
     4441 gtttatcagg gcgcgggtgt atcagcgaaa aacctgatcc cgccaaccat gtggggctat
     4501 aacgacgacg ttcaggatta cacctacgat cctgaaaaag cgaaagcctt gctgaaagaa
     4561 gcgggtctgg aaaaaggttt ctccatcgac ctgtgggcga tgccggtaca acgtccgtat
     4621 aacccgaacg ctcgctgcat ggcggagatg attcaggcag actgggcgaa agtgggcgtg
     4681 caggccaaaa tcgtcaccta cgaatggggt gagtacctca agcgtgcgaa agatggcgaa
     4741 catcagacgg taatgatggg ctggactggc gataacgggg acccggataa cttcttcgcc
     4801 accctgttca gctgcgccgc ctctgaacaa ggttctaact actcaaaatg gtgctacaaa
     4861 ccgtttgaag atctgattca accggcgcgt gctaccgacg accataacaa acgcgttgaa
     4921 ctgtacaagc aatcgcaggt ggtgatgcac gatcaggctc cggcactgat catcgctcac
     4981 tccaccgtgt ttgaaccggt acgcaaagaa gtcaaaggct atgtggttga tccattaggc
     5041 aaacatcact tcgaaaatgt ctctatcgaa taattaaaag ccatacaaga ctgatggtaa
     5101 aggcaaaact gcctgatgtg ctccgcttat caggcctacg aaaattctgc aatgtattga
     5161 atttgcacga ttttgtaggc cggataaggc gttaacgccg catccggcat aaacaaagcg
     5221 cactttgtca acaatctgta tacccggtgg cgctgtgcct ctgcgtgcag cgccatccgg
     5281 cagcaatact tcattctctg tccgacaagg gcgggaattg atttgtgagc aatacagaca
     5341 cgcagttcca ggctgcgggt cactatagag aatccgggtt atgttgcagt ttattctccg
     5401 acgtttggga ctcgtcatcc ccacgtttat cggtattacc cttctcacat ttgcctttgt
     5461 ccacatgatc ccgggcgatc cggtgatgat catggcaggc gaacgtggga tctcccctga
     5521 gcgtcacgcg cagctgctgg ctgaactcgg cttagataaa ccgatgtggc agcagtatct
     5581 ccattacatt tggggcgtaa tgcacggcga tctaggcatt tcaatgaaaa gccgaattcc
     5641 agtatgggaa gagttcgtgc cgcgctttca ggccacgctg gaacttggcg tctgcgcgat
     5701 gatttttgct acggcagtcg gtattccggt tggtgtgctg gctgcggtta aacgcggttc
     5761 cattttcgat cacactgcag ttggcctggc gctgaccggc tactcgatgc cgatcttctg
     5821 gtggggcatg atgctgatca tgctggtttc ggtgcactgg aacctgacgc ccgcctccgg
     5881 tcgcgtgagc gatatggtgt tcctcgatga ctccaatccg ttaaccggtt ttatgctaat
     5941 cgacaccgcc atctggggtg aagacggcaa ctttatcgat gccgtcgccc atatgatctt
     6001 gcctgccatt gtgctgggta ctattccgct ggcggtcatt gtgcgtatga cacgctcctc
     6061 gatgctggaa gtgctgggcg aggattacat ccgcaccgcg cgcgccaaag ggctaacccg
     6121 catgcgggtg attatcgtcc atgcgctgcg taacgcgatg ctgccggtgg tgaccgttat
     6181 cggcctgcag gtgggaacat tgctggcggg ggcgattctg accgaaacca tcttctcgtg
     6241 gcccggtctg ggacgctggt tgattgacgc actgcaacgc cgcgactatc cggtagtgca
     6301 gggcggcgta ttgctggtgg cgacgatgat tatcctcgtc aacttgctgg tcgatctgct
     6361 gtacggcgtg gtgaacccgc gtattcgtca taagaagtaa ggggacatca tgtcacaggt
     6421 tactgaaaat aaagtgatta gcgcaccggt gccgatgacc ccgttacagg agttctggca
     6481 ctattttaaa cgcaacaaag gcgcggtcgt cgggctggtt tacgtcgtca tcgtgctgtt
     6541 catcgcgatc tttgccaact ggattgcacc ctataacccg gcggaacagt tccgcgatgc
     6601 actgctcgcc ccgccagcct ggcaggaagg cggcagcatg gcgcacttgc tgggcaccga
     6661 tgacgtaggc cgtgatatgc tgtcgcgcct gatgtacggt gcgcgcctgt cgctgctggt
     6721 tggctgtctg gtagttgtgt tatcgctgat tatgggcgtt attctcggcc tgatcgccgg
     6781 ttactttggc ggcctagtcg ataacatcat tatgcgcgtg gtcgatatca tgctggcgct
     6841 gccaagtctg ctgctggcgc tggtgctggt ggcaattttc ggcccgtcga ttggtaacgc
     6901 cgcgctggca ctgaccttcg ttgccttgcc gcactatgtg cgcttaaccc gcgccgccgt
     6961 gctggtggaa gttaaccgcg attacgtcac cgcgtctcgc gtggcgggtg ccggggcgat
     7021 gcgtcagatg tttattaaca tcttcccgaa ctgccttgcg ccgctgattg ttcaggcgtc
     7081 gctcggtttc tctaacgcca ttctcgatat ggctgctctt ggtttcctcg gcatgggggc
     7141 acagccgcca acgccggagt ggggcaccat gctctccgac gtgttgcagt tcgcgcaaag
     7201 cgcctggtgg gtcgtgacct tcccgggtct ggcgatcctg ctgacggtgc tggcatttaa
     7261 cctgatgggt gacggtctgc gtgacgcgct cgatcccaaa ctgaagcagt aagaggttcg
     7321 agatggcgtt attaaatgta gataaattat cggtgcattt cggcgacgaa agcgcaccgt
     7381 tccgcgccgt agaccgcatc agctacagcg taaaacaggg cgaagtggtt gggattgtgg
     7441 gtgagtccgg ctccggtaag tcggtcagtt ccctggcgat tatggggctg attgattatc
     7501 cgggccgcgt aatggcggaa aaactggtgt ttaacggtca ggatttgcag cgtatatcag
     7561 aaaaagagcg ccgcaacctg gtgggtgccg aagtggcgat gatcttccag gacccgatga
     7621 ccagccttaa cccgtgctac accgtgggtt tccagatcat ggaagcgatt aaggtgcatc
     7681 agggcggcaa caaaagtacc cgccgtcagc gggcgattga cctgctgaat caggtcggta
     7741 ttcccgatcc ggcttcgcgt ctggatgttt acccgcatca gctttccggc ggcatgagcc
     7801 agcgcgtgat gatcgccatg gcgattgcct gtcgaccaaa actgctgatt gccgatgagc
     7861 cgaccaccgc gctggacgtg accattcagg cgcaaatcat cgaactactg ctggagctac
     7921 agcagaaaga gaacatggcg ctggtgttga ttacccatga cctggcgctg gtggcggaag
     7981 ctgcgcataa aatcattgtg atgtatgcag gccaggtggt ggaaacgggc gatgcgcacg
     8041 ccatcttcca tgcgccgcgt cacccgtata ctcaggcatt gctgcgtgcg ctgccagaat
     8101 ttgctcagga caaagaacgt ctggcgtcgt tgccaggtgt cgttcccggc aagtacgacc
     8161 gcccgaacgg ctgcctgctt aacccgcgct gcccctatgc cactgacaga tgtcgcgctg
     8221 aagaaccggc gctgaatatg ctcgctgacg ggcgtcagtc caaatgccat tacccacttg
     8281 atgatgccgg gaggccgaca ctatgagtac gcaagaggcc accctgcaac aaccgctgtt
     8341 gcaggctatc gacctgaaaa aacattatcc ggtgaagaaa ggcatgttcg cgccggaacg
     8401 tctggttaaa gcgctggatg gcgtttcgtt taaccttgaa cgtggcaaaa cgctggcagt
     8461 agtgggcgaa tctggctgcg gtaaatcgac cctcggtcgg ttgctgacga tgattgaaac
     8521 gcccaccggt ggcgagctgt attaccaggg gcaggatctg cttaagcacg atccgcaggc
     8581 gcagaagctg cgtcggcaga aaatccagat cgtcttccag aacccttacg gttcgctgaa
     8641 tccgcgtaaa aaagtcgggc aaattcttga agagccgctg ctgatcaaca ccagcttaag
     8701 caaagaacag cgtcgggaaa aagccctgtc gatgatggcg aaagtcggcc tgaaaaccga
     8761 gcactatgac cgctatccgc atatgttctc cggcggtcag cgtcagcgta tcgccatcgc
     8821 ccgtggtctg atgctcgacc cggatgtggt gattgccgat gaaccggttt ccgcgctgga
     8881 tgtttcagtg cgcgcgcagg tgctgaatct gatgatggat ttgcagcagg agttggggct
     8941 gtcttatgtc tttatctccc acgacctgtc ggtggtggag cacattgctg atgaagtgat
     9001 ggtgatgtac ctgggccgct gcgtggagaa gggaacgaaa gaccaaatct tcaataaccc
     9061 gcgccatccg tacactcagg cgctactttc cgcgacgccg cgcctgaacc cggacgatcg
     9121 ccgcgagcgc atcaagctca gcggtgaact accaagccca ctgaatccac cgccgggttg
     9181 cgccttcaac gcccgctgtc gtcggcgctt cggcccctgc acccagttgc agccgcagct
     9241 aaaagactac ggcggtcaac tggtagcttg ttttgctgtt gatcaggatg aaaatccgca
     9301 gcgttaactc acaaaaccgg ggccatgcgc tccggtttac tcaatcagct tcaacagtgg
     9361 cgacaagcat agcaaaatgc cgtaaagcag aattagccag gctttaaatc cgcgaagttt
     9421 ttccagttgt gcgactttat agatcaggaa aaacggaatg aggcacgaca caatgccata
     9481 taacgggctt cccaactgaa agaacaccag caccgataca cgaaacgaaa cccaaatcgt
     9541 caacgtaatg acgataaaag cgcagatcgc cagagtcagc atgcgtgagt taattttctt
     9601 ggtatcaata attcggctta acagattgag aataatgcct ttaatagcct cgtggaaacc
     9661 gagataaatg ccaaagaatg cggtcagtac ggcaaagata ttcagcaccg tagaggtgat
     9721 atgaatgata tgtccaggga tcacctgcgc ggccagtgcc agtgccgaga tattttgttc
     9781 aaaggcagaa acggcttctt cgtggctaat tgagaaggta aacgaaaagg caaaaaacag
     9841 gatcaccgcg atgagcgtga tataactaat tcggtgggta cgcagcgcga gccgggttgc
     9901 cagtacttta tctgcttccc gtttacgata ggcaatattc attgggttaa gtacctgaat
     9961 aaataccgca gaaaagaagc aaaatggaat tgtaagcagg acatcgcgga aaaagacgga
    10021 ggcttgcggg aaggcggtta tattggcgaa attccagtgc gggatcatcg caaaaccgaa
    10081 cacgacaata atccctactt tgaccaccac cattggcccg gaaatcttaa acagtaatcg
    10141 ttcaccacca gacgcaatcg ctaccagtac ggcgaaaata gcgactttat aaagtagaga
    10201 ttgtgaaaga tcggcatcgg ttaaaccgaa ggttttcagg tacgaggcgc tgtcgaaaac
    10261 cacggagaga gagtagataa aaatcccgtg gataatcatc aaaaagtaga taaccccgag
    10321 gaaaattccc cagttcttcc ccaggtaatg actgataata tcggtgtagt cattacagga
    10381 atcgctttca gaaagggttt ttaaataaat gtcctgcact acccaggtgg caggataagc
    10441 aatgatcgct gcggtaataa atacccaaat tcccttcaag ccaatttgta ctggcatcag
    10501 cacggttccg gcaccaatcg ccatgcctat gcataataaa acccagccga agtcgtagcg
    10561 tgtaaacggc aatttctgat tgtgtttcga tagtgtgttg tgctgcataa agtcctgtcc
    10621 agaaagaagt cggcctcgca aaaatgaata aacccagttt ctcttgcgca acaggtggag
    10681 aagtcgaata cgcagtatgt aaaaaatgag gcaacagatt cactggggag gtcgcgagga
    10741 ggcgcaattc tacaaaattg cgcatttcac taccagtctg gagtcagccc ggatatgaac
    10801 tgcaactatt gcaaataaag aaattaagct ggaaggcatc gcgcaatgag gaagattgcc
    10861 gggtgctgac agtaaaaagc aatcgtaaaa tcagcggcaa gccgaaaggg ttccggtgag
    10921 gcgcaatgtt gcgggggctt tatccctggt ggcattggtt gctggagaga gaaaaccccc
    10981 gcacgttgca ggtatgcacc tgacaacatc acgggggcta atcttgaacc caaacaactc
    11041 aagaatagcc gcgaaacgtt ggcattacaa cacaggcggc tatatgacgc tcgcagaact
    11101 gggcatggcc ttctggcatg atttagcggc tccggtcatt gctggcattc ttgccagtat
    11161 gatcgtgaac tggctgaata agcggaagta acgtgtcatg cgggcgtcag gctgccgtaa
    11221 tggcaatttg cgcccggatc aggccgcaga ggttaaactc tgcggccttt ttcgtgctta
    11281 ctgcgggtaa ggcacccagt cgccgccgtt caggcgaacg tacggtttat cctggtattg
    11341 aataactact gcatttgagt tctcggagac cggtgctgtt tgtggcaacc cactggtgag
    11401 ttttttccag tcaacattgt cttcggtgaa aatcttgcca tcaagaacgc gaaccaccag
    11461 atcggagata gccaggaagc tgctcggttg gtcgatgaca atcggtgccc cctgatgtgg
    11521 tgccttcatg ccgaagaatt tcaccccaac ggggacgtct gtgatagacg ggctagggat
    11581 atcacgtagg ccagatacct gcattctgtc gcccttcagc gcgccgccgt gttccggcac
    11641 cacgaccacc atcactttac gacccgattt ctccagttca gtaaagaagg cgtccagttc
    11701 atcaaagaat ttctgcgccc gcgctttgta atccgctgtt ttgctgaccc ccggataatg
    11761 gttgccgtca tgcagtggaa gcgtgttgta gaacgtggca ctacggctgt ttttatcttt
    11821 ttcggtaacg tccagccagc ggttaagcac ggtggtatcg tcataaaccg gcgaaccatc
    11881 aaagcccagc aaaataaccg gcagatttgt ttgatccatc aattcagtct gcatgccgcc
    11941 attttcgcga acttctttca aaaaaccgcc gaactggccg ttatgtccca tcatcaggtg
    12001 ctgggtaaag cccagtttcg aaaggttatc aaacagatag cagtcgttat ttgccggttg
    12061 atacagatta gtgtgcgaag tctgcccgca gctggcgcgc agtaaacgga tcgccgccgg
    12121 gccactgtag gaggtggcgg agttaaagtt cttgaactca atatcgaaat gcgaccacag
    12181 tggatgcgac atcaacccgg cggcttctat atccgaccag gaaagcgaac agatgttaat
    12241 caccagtagt tcaaatggct gagcatcagc gggcagcgaa gacgggaagg tcgatttacg
    12301 tttcgcctcc gcgttataga aattattcag ccaggcgtta aggttcgccg ttgttggcgg
    12361 tgtagtttgt gcgggcatat cacccactac cggtgcgcca cccgtcgtct caacggttgc
    12421 cgctgcgtta ccacccgtcg ttgttacagt ggtcgtcggt tgtccggctg gccacaagga
    12481 gaaacttggt cccgccaggg taagtacgtt cagccatagc agtatggcaa ccacaaaaac
    12541 ggtaatgcga atccattgtg acaggaataa ccaggccact aataaaacaa aaatggcccc
    12601 aatcatctgc cagttaataa agcgtgtgac aaggtcgatt aaataatcgg tactgaaccc
    12661 cgccacctgc gaaccctggc tcattatgct ttccgggcca ggcaaccagg tgtcatgcca
    12721 gaacaaagca aagccgatcg gcagggcaat ccagtggcgc aagcgatgca ggctgtagcg
    12781 cggaatgggc atcagcagaa acgcggcaaa caccaaattg aggagcggat ggaagttaag
    12841 atatcccgcc cacaacaggc cgaacttaac cagaaaatag aagttccagc cggaaaggcc
    12901 gcgccagtat tgccagaggg aagaaggcat ggcggtattt tgcgtaaatt gagtcatttt
    12961 ttggttgccc tggctttttc cgtgcggcgt aatgtcccgg ccggtttaac ataacgaggt
    13021 ttagcaaaga acaaacgtaa ggtgtcgcga atgcgtcgca aagagtgccg cgccagatag
    13081 cccagcggga aaaatatcag tgcgcaaacg acaataattt caatgatatc gctgatggtc
    13141 atcatgatga gcgctccaca gcatcatcta acagtcgcat gggttctggt attcgtcgcc
    13201 agtggcgacc atcgtgctcg gcattgatga ccggtttaga actttgcgtt aaaggcagcg
    13261 gcatgcccca ttgttctggg gcaagcaggc gcatctgcac cagctcggca ctgatttgat
    13321 catcttcaaa ccagaccata cggtttgaga aaatgtcgcc agtaggcaat gggaaaatat
    13381 gattcaacgc ggtatccaga tcgttaatcc gacagaatga gagaaacagc accagccgat
    13441 taccgccaat ggtcatgata tcgccggtac ggttagggcg acacagcgtc agggcttgtt
    13501 caacgcggat acccggtacc ggacgtaggg caaccagaac gcctttaccg tgggcaggta
    13561 atagagggtt attcatcatg ttgttgacgg cattacagaa cacatcccac ttctggaaac
    13621 cacgcagttt gagcggctgg gtcattgaca gcaaggtagt gatatcttcc ggcacatagc
    13681 gactaaactt ctgcccttgc acgctttcga tcatcgtcag acaacgggag agtggcgcat
    13741 tccacggaat aaccatattt gcaccgcagg ccaataacaa acgttcatcg gtggcgcgca
    13801 ggctagcggt attttcccgc acgaggattt tcatcgcact accgcgctgg cgacgcaggg
    13861 tatgaatgct gcgggccagt ggctcgattt gcgcattttg ctgtaaagaa aagaccaccg
    13921 tcgccgcctg agcggtacgg gcttcattga acaggacttc gttattgttg aacagttgcc
    13981 agtgttccga tagcggcggc gcaccttcca gtacagcaac attactcaga atgcgttttt
    14041 cgtcgctgcg tggttggatc tccgcctctt cgctttgaac taatgtccag ataccatttt
    14101 gttgctgaac gctaagctgc tgacgggcgc tgaccccttt ttcgttgcac cagaaggcaa
    14161 tatccagcaa atgttggtca ccctgaaaac gcaaactggc aagaccaaaa agtgaacggt
    14221 attcctcaag caacaatgaa aattgtttat cgttattatt tccgggatta attaccaaaa
    14281 gcgaacaatg ggttaacctg ctccatttat tcattttatc caaccatgag cgaagccgct
    14341 cggcaggaat gttttgccat gcgttatttg cgcaaacaag aataaaaagg taattatggg
    14401 gatcaataga acactgcaaa tcacgggtca aatagtatag acctttttca tgatttagca
    14461 ttgaaaataa ttttattttt tccggccctt gataatcatc taattgaaag attttcgccg
    14521 gatcgctgtc catgctaatg accgcgacgt gtgcggtttc agcctgggat gcaattgttt
    14581 gattcgccag actgatagca tcttcatggc gatcgacgtt aaaccaccag acgccgcctg
    14641 ctggcatatg tcgcagctca tcccataatg atgagatacc gatagagaat acagggccca
    14701 caatgtccct catgtcacca ttttgtctga ttatcagttt actagcgaaa gctaagaaat
    14761 aaacctacca ttgaaattaa aacttatcag atttagcatg tgaatcaatt tagaaggtca
    14821 caagacgtgt gattttagtc ttttcgtttt taactttttc tgttgcgtaa cggaaagtca
    14881 aaaagtgagc aaattcccgt ctcgccgtaa acaataaacc ggcgaaatgc tcacggttag
    14941 aattgtctca tgaacggtac ggttatttca tagggatcaa gcaaaatgaa taacaatgaa
    15001 ccagatactc tgcctgatcc cgcgataggc tatatcttcc agaatgatat tgtggcgtta
    15061 aagcaggcat tttcactgcc tgatattgat tatgccgata tttcccaacg cgaacagttg
    15121 gccgcggcat taaaacgctg gccgttgctg gcagagtttg cgcaacaaaa gtaggggatt
    15181 ggtgaatggc cgtactggga ttgcaggggg tgcggggagg cgtggggaca acaaccatca
    15241 ccgccgcatt agcctggtca ttacaaatgt tgggagaaaa tgtcctggtg gtcgatgcct
    15301 gcccggacaa cttgttgcgc ctgtcattta atgttgattt tacccaccgt cagggctggg
    15361 ccagagcgat gctggatggc caggactggc gtgacgctgg gttgcgctac acctcgcagc
    15421 tcgatttgct gccttttggt cagttatcca ttgaagaaca agaaaatcca cagcacaggc
    15481 aaacccggct gagcgatatt tgctccggct tacagcaact aaaagccagc gggcgttacc
    15541 agtggatttt aatcgactta ccgcgtgatg cctcgcagat aacccaccag ctgctgagtt
    15601 tgtgcgatca ctcgctggca atcgtcaatg tggatgccaa ctgccatatc cgactgcatc
    15661 agcaagcgct gccggatggc gcacatattt tgattaatga cttccgtatt ggcagtcagg
    15721 ttcaggacga tatttaccag ctttggttgc aaagccagcg ccgattactg ccgatgctca
    15781 ttcatcgtga tgaagcgatg gctgaatgcc tggcggctaa gcaaccagta ggtgaatatc
    15841 gcagtgatgc gctggcggct gaagagatac tgacgctggc gaactggtgc ctgttgaact
    15901 actccgggct gaaaacgcca gtcgggagtg catcatgagt atcctgaccc ggtggttgct
    15961 tatcccgccg gtcaacgcgc ggcttatcgg gggttatcgc gattatcgtc gtcacggtgc
    16021 gtcggctttc agcgcgacgc tcggctgttt ctggatgatc ctggcctgga tttttattcc
    16081 gctggagcac ccgcgctggc agcgtattcg cgcagaacat aaaaacctgt atccgcatat
    16141 caacgcctcg cgtccgcgtc cgctggaccc ggtccgttat ctcattcaaa catgctggtt
    16201 actgatcggt acatcgcgca aagaaacgcc gaaaccgcgc aggcgggcat tttcaggtct
    16261 gcagaatatt cgtggacgtt accatcaatg gatgaacgag ctgcctgagc gcgttagcca
    16321 taaaacacag catcttgatg agaaaaaaga gctcggtcat ttgagtgccg gggcgcggcg
    16381 gttgatcctc ggtatcatcg tcaccttctc gctgattctg gcgttaatct gcgttactca
    16441 accgtttaac ccgctggcgc agtttatctt cctgatgctg ctgtggggtg tagcgctgat
    16501 cgtacggcgg atgccggggc gcttctcggc gctaatgttg attgtgctgt cgctgaccgt
    16561 ttcttgccgt tatatctggt ggcgttacac ctctacgctg aactgggacg atccggtcag
    16621 cctggtgtgc gggcttattc tgctcttcgc tgaaacgtac gcgtggattg tgctggtgct
    16681 cggctacttc caggtcgtat ggccgctgaa tcgtcagccg gtgccattgc cgaaagatat
    16741 gtcgctgtgg ccgtcggtgg atatctttgt cccgacttac aacgaagatc tcaacgtggt
    16801 gaaaaatacc atttacgcct cgctgggtat cgactggccg aaagacaaac tgaacatctg
    16861 gatcctcgat gacggcggca gggaagagtt tcgccagttt gcgcaaaacg tgggggtgaa
    16921 atatatcgcc cgcaccactc atgaacatgc gaaagcgggc aacatcaaca atgcgctgaa
    16981 atatgccaaa ggcgagttcg tatcgatttt cgactgcgac cacgtaccaa cgcgatcgtt
    17041 cctgcaaatg accatgggct ggttcctgaa agagaaacag ctggcgatga tgcagacgcc
    17101 gcaccacttc ttctcgccgg acccgtttga acgcaacctg gggcgttttc gtaaaacgcc
    17161 gaacgaaggc acgctgttct atggtctggt gcaggatggc aacgatatgt gggacgccac
    17221 tttcttctgc ggttcctgtg cagtaattcg tcgcaaacca ttggatgaaa ttggcggtat
    17281 tgctgtcgaa acggtaaccg aagatgcgca cacgtctctg cgcctgcacc gtcgtggcta
    17341 cacctctgca tatatgcgta ttccgcaggc ggcggggctg gcgaccgaaa gtctgtcggc
    17401 gcatatcggt cagcgtattc gctgggcacg cgggatggtg caaatcttcc gtctcgataa
    17461 cccgcttacc ggtaaagggc tgaaattcgc ccagcggctg tgctacgtca acgccatgtt
    17521 ccacttcttg tcgggcattc cacgactgat cttcctgact gcgccgctgg cgttcctgct
    17581 gcttcatgcc tacatcatct atgcgccagc gttgatgatc gccctgttcg tgctgccgca
    17641 tatgatccat gccagcctga ccaactcgaa gatccagggc aaatatcgcc actctttctg
    17701 gagtgaaatc tacgaaacgg tgctggcgtg gtatatcgca ccaccgacgc tggtggcgct
    17761 gattaacccg cacaaaggca aatttaacgt caccgccaaa ggtggactgg tggaagaaga
    17821 gtacgtcgac tgggtgatct cgcggcccta catcttcctt gttctgctca acctggtggg
    17881 tgttgcggtc ggcatctggc gctacttcta tggcccgcca accgagatgc tcaccgtggt
    17941 cgtcagtatg gtgtgggtgt tctacaacct gattgttctt ggcggcgcag ttgcggtatc
    18001 ggtagaaagc aaacaggtac gccgatcgca ccgcgtggag atgacgatgc ccgcggcaat
    18061 tgcccgcgaa gatggtcacc tcttttcgtg taccgttcag gatttctccg acggtggttt
    18121 ggggatcaag atcaacggtc aggcgcagat tctggaaggg cagaaagtga atctgttgct
    18181 taaacgcggt cagcaggaat acgtcttccc gacccaggtg gcgcgcgtga tgggtaatga
    18241 agttgggctg aaattaatgc cgctcaccac ccagcaacat atcgattttg tgcagtgtac
    18301 gtttgcccgt gcggatacat gggcgctctg gcaggacagc tacccggaag ataagccgct
    18361 ggaaagtctg ctggatattc tgaagctcgg cttccgtggc taccgccatc tggcggagtt
    18421 tgcgccttct tcggtgaagg gcatattccg tgtgctgact tctctggttt cctgggttgt
    18481 atcgtttatt ctgcgccgcc cggagcggag cgaaacggca caaccatcgg atcaggcttt
    18541 ggctcaacaa tgatgataac gcgatgaaaa gaaaactatt ctggatttgt gcagtggcta
    18601 tggggatgag tgcgttcccc tctttcatga cgcaggcgac gccagcaacg caaccactga
    18661 tcaatgctga gccagctgta gccgcccaga cggaacaaaa tccgcaggtg gggcaagtga
    18721 tgccgggcgt gcagggcgct gatgcgccag tcgtggcgca gaacggtcct tcgcgtgatg
    18781 tgaagctgac ctttgcgcaa attgcgcctc cgccgggcag catggtgcta cgtggcatta
    18841 acccgaacgg cagcattgag tttggtatgc gcagcgatga agtggtgacg aaggcgatgc
    18901 tcaacctcga atacatgcca tcgccatcgt tactgcctgt ccagtcgcag ttaaggttta
    18961 tctcaatgat gagctgatgg gcgtactgcc agtgaccaaa gaacagttgg gtaaaaaaac
    19021 gctggcgcaa atgcccatta acccactgtt tattaccgac ttcaaccgtg tgcggctgga
    19081 gtttgtcggc cattatcagg acgtgtgcga aaacccggcc agaaccacgc tttggctgga
    19141 tgttgggcgg agcagtggac tggatctgac ctatcagacc ctgaatgtga agaatgacct
    19201 gtcacacttc ccggtgccat tctttgaccc gcgcgataac cgtactaaca ccttgccgat
    19261 ggtctttgcg ggtgcgccgg atgttgggct gcaacaagca tctgccattg tcgcctcgtg
    19321 gtttggttcg cgttctggct ggcgtgggca gaacttcccg gtgctctata accaactgcc
    19381 ggatcgtaat gccattgtct ttgcaaccaa cgacaaacgg ccggacttcc tgcgcgatca
    19441 tccggcggta aaagccccgg tgattgagat gatcaaccat ccgcagaatc cttacgtcaa
    19501 actgctggtg gtgtttggtc gtgacgacaa agacctgttg caggcagcga aaggtatcgc
    19561 tcagggtaac attctgttcc gtggtgaaag cgtggtagtg aatgaagtga aaccgctgct
    19621 accgcgtaag ccgtacgatg cgccgaactg ggtacgtacc gatcgtccgg tcacatttgg
    19681 cgaactgaaa acctatgaag aacagttaca atccagcggt cttgagccag cagcgattaa
    19741 cgtttcgcta aacctgccgc cggatctcta cctgatgcgc agtaccggca ttgatatgga
    19801 tattaattac cgctacacca tgccgccggt gaaagacagt tcgcggatgg atatcagcct
    19861 gaataaccag ttcctgcaat ccttcaacct gagcagcaaa caggaggcga accgcctgct
    19921 gctgcggatt ccggtattac aaggtttgct ggatggcaaa acagatgtct ctattccggc
    19981 gctgaaactg ggcgcgacca accagctgcg cttcgacttt gagtatatga acccgatgcc
    20041 gggcggttcg gtggataact gtattacctt ccagccggtg cagaatcatg tggtgattgg
    20101 tgacgactcc accatcgact tctcgaagta ttaccacttc atcccgatgc cggatctacg
    20161 cgcctttgct aacgcgggct tcccattcag ccggatggcg gatctgtcgc aaaccatcac
    20221 cgtgatgccg aaagcgccta acgaagcaca gatggaaacg ttgctgaata ctgttggttt
    20281 tatcggcgca cagacgggct tcccggcgat taatctgacg gtgaccgatg atggcagcac
    20341 cattcagggc aaagatgccg acatcatgat catcggtggt atcccggaca aactgaaaga
    20401 cgataagcag atcgacctat tggtgcaggc gaccgaaagc tgggtgaaaa caccgatgcg
    20461 ccagaccccg ttccccggca ttgtgccgga cgagagcgat cgcgcggcag aaacccggtc
    20521 aacgctgacc tcttccggtg cgatggcggc ggtgattggc ttccagtcgc cgtataacga
    20581 ccagcgcagc gtgattgcgc tgttggcaga tagcccacgc ggttatgaaa tgcttaacga
    20641 tgcggtgaac gatagcggca aacgcgccac catgttcggt tcggtcgcgg tgatccgcga
    20701 gtccggtatc aacagcctac gtgttggcga cgtttattac gtaggtcatc tgccgtggtt
    20761 cgagcgcgtg tggtatgcgc tggcaaacca tccgattctg ctggcggtgc tggcggctat
    20821 cagtgtgata ttgctggcat gggtactgtg gcgtctgctg cgaattatta gtcgtcgtcg
    20881 tcttaacccg gataacgagt aattgaagat gaatgtgttg cgtagtggaa tcgtgacgat
    20941 gctgttgttg gctgccttta gtgttcaggc agcctgtacc tggcctgcct gggagcagtt
    21001 taaaaaggat tacatcagtc aggaagggcg cgtcatcgac cccagcgacg cgcgcaaaat
    21061 caccaccttc gaagggcaaa gttacggtat gttctttgcc ctggcggcta acgaccgtgc
    21121 agctttcgat aatattctcg actggacgca gaacaatctc gctcagggtt ctttaaaaga
    21181 acgtttgccc gcctggctgt ggggcaagaa agagaacagt aagtgggaag tgctggacag
    21241 caattcggcc tccgatggtg atgtctggat ggcctggtcg ttgctggagg cggggcgttt
    21301 gtggaaagag cagcgttata ccgacatcgg cagcgcgttg ctaaaacgta tcgcgcggga
    21361 ggaagtggtg acggtgcctg ggctgggttc catgttgtta ccgggcaaag tgggttttgc
    21421 tgaggataac agctggcgtt ttaaccccag ctacctgccg ccgacgctgg cgcagtattt
    21481 cacccgcttt ggcgcgccgt ggactacgct gcgcgaaacc aatcaacgtt tattgctgga
    21541 aaccgccccg aaaggctttt cgccagactg ggtgcgttat gagaaagaca aaggctggca
    21601 gctaaaagcc gaaaaaacat tgatcagcag ctacgacgcc atccgcgttt acatgtgggt
    21661 aggcatgatg cctgacagcg atccgcagaa agcgcggatg ctcaaccggt ttaaaccgat
    21721 ggcgacattc actgagaaaa acggttatcc gccggaaaaa gtggatgtgg ctacggggaa
    21781 agcgcagggt aaaggaccag tcggtttttc tgccgccatg ctgccctttt tacaaaaccg
    21841 cgatgcgcag gccgttcagc gtcagcgcgt ggccgataac tttcccggca gcgatgccta
    21901 ttacaactat gtgctgaccc tgtttggaca aggctgggat caacaccgtt tccgcttctc
    21961 gacaaaaggt gagttattac ctgactgggg ccaggaatgc gcaaattcac actaaacata
    22021 ttcacgcttt ccctcggtct ggccgtcatg ccgatggtcg aggcagcacc aaccgctcag
    22081 caacagttgc tggagcaagt tcggttaggc gaagcgaccc atcgtgaaga tctggtgcaa
    22141 cagtcgttat atcggctgga acttattgat ccgaataacc cggacgtcgt tgccgcccgt
    22201 ttccgttctt tgttacgtta gggcgatatt gatggcgcgc aaaaacagct cgatcggctg
    22261 tcgcagttag cgccgagttc aaatgcgtat aaatcgtcgc ggactacgat gctactttcc
    22321 acgccggatg gtcgtcaggc actgcaacag gcacgattgc aggcgacgac cggtcatgca
    22381 gaagaagctg tggcgagtta caacaaactg ttcaacggtg cgccgccgga aggtgacatt
    22441 gctgtcgagt actggagtac ggtggcgaaa attccggctc gccgtggcga agcgattaat
    22501 cagttaaaac gcatcaatgc ggatgcaccg ggcaatacgg gcctgcaaaa caatctggcg
    22561 ctattgctgt ttagtagcga tcgccgtgac gaaggttttg ccgtcctgga acagatggca
    22621 aaatcgaacg ccgggcgcga aggggcctct aaaatctggt acgggcagat taaagacatg
    22681 cccgtcagtg atgccagtgt gtcggcgctg aaaaaatatc tctcgatctt tagtgatggc
    22741 gatagcgtgg cggctgcgca atcgcaactg gcagaacagc aaaaacagct ggccgatcct
    22801 gctttccgcg ctcgtgcgca aggtttagcg gcggtggact ctggtatggc gggtaaagcc
    22861 attcccgaac tacaacaggc ggtgcgggcg aacccgaaag acagtgaagc tctgggggcg
    22921 ctgggccagg cgtattctca gaaaggcgat cgcgccaatg cagtggcgaa tctggaaaaa
    22981 gccctcgcac tggacccgca cagcagcaac aacgacaaat ggaacagtct gctgaaagta
    23041 aaccgctact ggctggcgat ccagcagggc gatgctgcgc tgaaagccaa taatcctgac
    23101 cgggcagaac gcctgttcca gcaggcgcgt aatgtcgata acaccgacag ttatgcagtg
    23161 ctggggctgg gcgatgtggc gatggcgcga aaagattatc ccgccgccga acgttattat
    23221 cagcagacct tgcgtatgga cagcggcaac actaacgccg tgcgcgggct ggcaaatatt
    23281 taccgccagc aatcgccaga aaaagctgaa gcgtttatcg cctcgctctc tgccagtcag
    23341 cggcgtagca ttgatgatat cgaacgcagc ctgcaaaacg accgtctggc acagcaggca
    23401 gaggcactgg aaaaccaggg caaatgggcg ccggcggcag cacttcagcg gcaacgactg
    23461 gcgctggacc ccggcagcgt atggattact taccgacttt cgcaggatct ctggcaggcc
    23521 ggacaacgca gccaggccga tacgttaatg cgcaatctgg cgcagcagaa gtcgaacgac
    23581 ccggagcagg tttacgctta cgggctgtac ctctctggtc atgaccagga cagagcggcg
    23641 ctggcgcata tcaacagcct gccgcgagcg cagtggaaca gcaatattca ggagctggtt
    23701 aatcgactgc aaagcgatca ggtgctggaa accgctaatc gcctgcgaga aagcggcaaa
    23761 gaagctgaag cggaagcgat gctgcgtcag caaccacctt ccacgcgtat tgacctcacg
    23821 ctggctgact gggcgcagca gcgacgtgat tacaccgccg cccgcgctgc atatcagaat
    23881 gtcctgacgc tggagccaac taacgccgat gccattctgg ggctgacgga agtggatatt
    23941 gctgccggtg acacagcggc ggcacgtagc cagctggcga aactgcccgc taccgataac
    24001 gcctcgctga acacacagcg gcgcgtggcg ctggcgcagg cgcagcttgg agataccgca
    24061 gcggcgcagc agacgtttaa taagttgatc ccgcaggcaa aatctcagcc accgtcgatg
    24121 gaaagcgcga tggtgctgcg cgacggtgcg aagtttgaag cgcaggcggg cgatccaaag
    24181 caggcgctgg aaacctacaa agacgccatg gtcgcatccg gtgtgactac gacgcgtccg
    24241 caggataacg acacattcac ccgactgacc cgtaacgacg agaaagatga ctggctgaaa
    24301 cgcggcgtgc gcagcgatgc ggcgggcctc tatcgccagc aggatcttaa cgtcaccctc
    24361 gagcacgatt actggggttc gagcggcacc ggtggttact ccgatctgaa agcgcacact
    24421 accatgttgc aggtggatgc gccgtattct gacgggcgga tgttctttcg cagtgatttc
    24481 gtcaatatga acgtcggcag tttctccact aatgccgatg gcaaatggga tgacaactgg
    24541 ggcacctgta cattacagga ctgtagtggc aaccgcagcc agtcggactc cggtgccagc
    24601 gtggaggtcg gctggcgaaa tgacgtctgg agctgggata tcggtaccac gccgatgggc
    24661 ttcaacgtgg tggatgtggt cggcggcatc agttacagcg atgatatcgg gccgctgggt
    24721 tacaccgtta acgcccaccg tcggcccatc tccagttctt tgctggcctt tggtgggcaa
    24781 aaagactccc cgagcaatac cgggaaaaaa tggggtggcg tacgtgccga cggtgtgggg
    24841 ctaagtctga gctacgataa aggtgaagca aacggcgtct gggcatcgct tagtggcgac
    24901 cagttaaccg gtaaaaatgt cgaagataac tggcgcgtgc gctggatgac gggctattac
    24961 tataaggtca ttaaccagaa caatcgccgc gtcacaatcg gcctgaacaa catgatctgg
    25021 cattacgaca aagatctgag tggctactca ctcggtcagg gcggttacta cagtccgcag
    25081 gaatacctgt cgtttgctat accggtgatg tggcgggagc gcacggaaaa ctggtcgtgg
    25141 gagctggggg cgtctggctc gtggtcgcat tcacgcacca aaaccatgcc gcgttatccg
    25201 ctgatgaatc tgatcccgac cgactggcag gaagaagctg cgcggcaatc caacgatggc
    25261 ggcagcagtc agggcttcgg ctacacggcg cgggcattac ttgaacgacg tgttacttcc
    25321 aactggtttg ttggcacggc aattgatatc cagcaggcga aagattacgc acccagccat
    25381 ttcctgctct acgtacgtta ttccgccgcc ggatggcagg gtgacatgga tttaccgccg
    25441 cagccgctga taccttacgc cgactggtaa gttttcagat agcgcctctc ttaatgccgc
    25501 tgcgatcggg tatactcggg cggcaatctg ggatttccgg ggggagacaa tttgcgcgta
    25561 agtcgctcgt taacaatcaa gcagatggca atggtggcag ccgttgtcct ggtgttcgtt
    25621 tttatttttt gcaccgtttt gctgttccat ctggtccagc agaatcgcta taacacggct
    25681 acgcaactgg aaagcattgc tcgctctgta cgcgaaccct tatcttcagc tattttgaaa
    25741 ggcgatattc ccgaagcgga agctattctt gccagcatta aaccggcagg cgtggtcagc
    25801 cgtgccgatg tagtgctgcc taaccagttc caggcgctgc gtaaaagttt tattccagag
    25861 cgcccggtgc cggtaatggt tactcgcctg tttgagctac cggttcaaat ctcgctgggc
    25921 gtttactcgc tcgaacgtcc ggcaaacccg cagccaattg cctatctggt actacaggcg
    25981 gattccttcc gtatgtataa gttcgtgatg agcaccctct caacgttagt gaccatttac
    26041 ttacttttgt cgcttatcct gaccgtcgcc atcagctggt gcattaaccg cctgattttg
    26101 catccgttac gcaatattgc tcgcgaactt aacgccatcc cagcccagga gcttgttggt
    26161 caccaactgg cattaccgcg tctgcatcag gacgatgaaa tcggtatgtt ggtgcgcagt
    26221 tacaacctca accagcaatt gctgcagcgc cattatgaag aacagaacga aaatgcgatg
    26281 cgcttcccgg tgtcggattt gccgaacaaa gccttgctga tggagatgct ggagcaggtt
    26341 gtcgcgcgta aacaaaccac cgcgctgatg atcatcacct gtgaaaccct gcgtgatact
    26401 gcgggcgtgc tgaaagaggc gcaacgagaa attctgctgc tgacgctggt ggaaaaactc
    26461 aaatcggtac tgtcgccacg tatgatcctc gcgcagatta gcggttatga ctttgctgtc
    26521 attgccaacg gtgtacagga accgtggcac gcaatcacct taggtcagca agtgctcact
    26581 atcatgagcg agcgcctgcc gattgaacgt attcaactcc gtccgcactg tagcattggc
    26641 gtggcgatgt tctacggcga tctcaccgcc gaacagcttt acagtcgcgc tatttctgcg
    26701 gcatttaccg ctcgccataa aggcaagaat cagattcagt tctttgatcc gcagcagatg
    26761 gaagccgccc agaagcggtt gacggaagag agcgatatcc ttaatgcact ggaaaatcat
    26821 cagtttgcta tttggttaca gccacaggtc gagatgacca gcggtaaact ggtcagtgcg
    26881 gaagtgttac tgcgtatcca gcaaccggat ggcagttggg acctgccgga tggcttaatc
    26941 gatcgcattg agtgctgtgg gctgatggtt accgtcggtc actgggtgct ggaagagtcc
    27001 tgtcgattgc ttgcagcctg gcaagagcgc ggcattatgc tgcccttgtc ggtaaacctc
    27061 tctgcgctgc aactgatgca cccaaatatg gtggcggata tgctggaact gttaacccgc
    27121 tatcgcattc aaccgggaac actgattctg gaagtgacag aaagccgacg tattgacgac
    27181 cctcatgctg cggtggcaat cctccgtccg ctgcgcaatg ccggagttcg ggtggcgctg
    27241 gatgatttcg gcatgggcta cgcagggctg cgtcagctgc agcatatgaa atcgttgcca
    27301 atcgacgtac tgaaaatcga caaaatgttt gttgaaggct tgccggaaga tagcagcatg
    27361 attgctgcaa ttatcatgct ggcgcagagc ctgaacttac aaatgattgc cgaaggcgtg
    27421 gagactgaag cacaacgcga ctggctggca aaagcgggcg ttggtattgc ccagggcttc
    27481 ctttttgctc gcccactccc tattgaaatc ttcgaagaga gttacctgga agaaaagtag
    27541 ctaccccaaa ctgattacaa aactttaaaa agtgctggtt tgtgcgagcc agctcaaact
    27601 ttttaacctt tttgtttcaa ttatgatcca ggtacatttc tgtgatgttg tctgggtgtt
    27661 attttaaggc cgcaggtacc tcataacctt acaagacctg tagttttact aaaggacacc
    27721 ctatgaaaac ctctctgttt aaaagccttt actttcaggt cctgacagcg atagccattg
    27781 gtattctcct tggccatttc tatcctgaaa taggcgagca aatgaaaccg cttggcgacg
    27841 gcttcgttaa gctcattaag atgatcatcg ctcctgtcat cttttgtacc gtcgtaacgg
    27901 gcattgcggg catggaaagc atgaaggcgg tcggtcgtac cggcgcagtc gcactgcttt
    27961 actttgaaat tgtcagtacc atcgcgctga ttattggtct tatcatcgtt aacgtcgtgc
    28021 agcctggtgc cggaatgaac gtcgatccgg caacgcttga tgcgaaagcg gtagcggttt
    28081 acgccgatca ggcgaaagac cagggcattg tcgccttcat tatggatgtc atcccggtga
    28141 gcgtcattgg cgcatttgcc agcggtaaca ttctgcaggt gctgctgttt gccgtactgt
    28201 ttggttttgc gctccaccgt ctgggcagca aaggccaact gatttttaac gtgatcgaaa
    28261 gtttctcgca ggtcatcttc ggcatcatca atatgatcat gcgtctggca cctattggtg
    28321 cgttcggggc aatggcgttt accatcggta aatacggcgt cggcacactg gtgcaactgg
    28381 ggcagctgat tatctgtttc tatattacct gtatcctgtt tgtggtgctg gtattgggtt
    28441 caatcgctaa agcgactggt ttcagtatct tcaaatttat ccgctacatc cgtgaagaac
    28501 tgctgattgt actggggact tcatcttccg agtcggcgct gccgcgtatg ctcgacaaga
    28561 tggagaaact cggctgccgc aaatcggtgg tggggctggt catcccgaca ggctactcgt
    28621 ttaaccttga tggcacatcg atatacctga caatggcggc ggtgtttatc gcccaggcca
    28681 ctaacagtca gatggatatc gtccaccaaa tcacgctgtt aatcgtgttg ctgctttctt
    28741 ctaaaggggc ggcaggggta acgggtagtg gctttatcgt gctggcggcg acgctctctg
    28801 cggtgggcca tttgccggta gcgggtctgg cgctgatcct cggtatcgac cgctttatgt
    28861 cagaagctcg tgcgctgact aacctggtcg gtaacggcgt agcgaccatt gtcgttgcta
    28921 agtgggtgaa agaactggac cacaaaaaac tggacgatgt gctgaataat cgtgcgccgg
    28981 atggcaaaac gcacgaatta tcctcttaat ctcaccactt atgcccgcac tcccttcccc
    29041 gagtgcgggt gtttgcgcat aattgacccc tgtgcctgaa cttaccacct gggtgagttc
    29101 aggtttattt cacttcttcc gtgacatttt catgttcttg cggtctaaca cgaagtgttt
    29161 ttaacgtcat ttagactgac tgacaacggg cagtttttta ttaccaggat agttgatcag
    29221 gggttcacat gcagggcaca aaaattcgac ttttagcggg cggtttgctg atgatggcca
    29281 ctgctggcta tgtgcaggca gatgcgctcc agcctgatcc agcatggcaa caggggacgc
    29341 tttccaacgg tttacagtgg caagtgctga ccacccccca gcgtcccagc gatcgtgttg
    29401 aaattcgcct gctggttaat accggttcgc tcgccgaaag tacacaacag agcggttaca
    29461 gtcacgccat ccctcgtatt gcgctaacgc aaagcggtgg ccttgacgca gcacaggcgc
    29521 gttcattgtg gcagcagggg atcgacccta aacgcccgat gccgccggta attgtctctt
    29581 atgacaccac gctgtttaat ctgagtttgc ccaataaccg taacgatttg ctgaaagaag
    29641 cgctctctta tctggcaaat gccactggca aattgaccat cacaccagaa accatcaacc
    29701 acgcgctgca aagtcaggac atggtggcaa cctggcctgc cgatactaaa gagggctggt
    29761 ggcgctatcg tctgaaaggg tcaaccttgt taggtcacga tcctgccgat ccgctgaaac
    29821 aacccgttga agcggaaaaa attaaagatt tctatcagaa atggtacacc ccggatgcaa
    29881 tgacgctact ggtggtggga aacgtggatg cgcgctcggt tgtcgaccaa atcaacaaaa
    29941 cgtttggcga actgaaaggc aaacgtgaaa cgccagctcc ggtgccgacg ctttctccgc
    30001 tgcgtgcgga agcggtgagt attatgactg acgcggtgcg tcaggaccgg ttatctatca
    30061 tgtgggatac gccgtggcag ccgattcgtg aatcagccgc actgctgcgc tactggcgtg
    30121 cggacctggc ccgcgaggcg ctgttctggc atgttcagca agcgttaagc gccagtaaca
    30181 gcaaagacat cggtcttgga tttgactgcc gtgtgctgta tctgcgtgcg cagtgtgcca
    30241 tcaacatcga atcaccaaac gacaagctga acagcaacct taatctggtg gcgcgtgaac
    30301 tggcgaaggt tcgcgataaa ggtctgccgg aagaagagtt caatgcgtta gtggcgcaaa
    30361 agaaactgga gctgcagaaa ctgtttgccg cctatgcgcg ggctgatacc gatattctga
    30421 tgggtcagcg gatgcgttcg ttgcaaaatc aggtcgtcga tatcgcgccg gagcagtatc
    30481 agaaactgcg gcaggatttc cttaacagcc tgacggtgga gatgttaaat caggatctgc
    30541 gtcagcagtt gtcgaatgat atggcgttaa tactgctgca gccgaaaggc gagccggaat
    30601 ttaacatgaa agcgttgcag gcggcctggg atcaaatcat ggccccatcg actgctgctg
    30661 ccgccacctc tgtcgccacg gatgacgtac atcctgaagt gacggatatt ccacctgcac
    30721 agtaatgcct gatggtgatg agttagcaca accatcaggt atttatggat gagctggata
    30781 gaggggtaac actttatcca gccttttgca tatgctgcgt ttacgctggc atcgcctcac
    30841 gcgggataat cgcgccgcga tactgaataa cggtacttgc ggtcaggtgc ccgcgtttcg
    30901 ccgcgttttc cgcactgccg cccgtcaaac gtaccgccag ataaccggcg ctgaaagagt
    30961 cgccagctgc ggtggtatcg atcacttttt ctttcggcag tttcaccgcc ggaacatcca
    31021 ctaacccttc gccagcaatg gacaccaggc aagaatccgc cccgcgtttc accaccactt
    31081 ctttcacgcc cgcgttatgg gtgcgcgcaa tgacgtcttc caccggctgt tgaccccaca
    31141 gcgcgtcttc atcgtccagc gtcaggaagg cgatatccgt gcattccagc atttgttggt
    31201 acacctgctg tgtctcttct ttgctggccc acaggcgcgg acgatagtta ttgtcgaaaa
    31261 tcacttttcc gccgttggcg cggcattcgc gcagcaggga aagcagcttt tcgcggctgg
    31321 tcgggcttaa gatcgccagg ctaatcccgc tcaggtagag ataatcgaaa ttcgccagct
    31381 cttcgcaaat cgccgtagac tgctcactct ccagccagaa tttggcggcg gcttcgttcc
    31441 gccagtagta gaacgtacgc tcgccggtgc tgtcggtttc aatgtagtaa aggcccggca
    31501 gacggttttc catccgttgg gtcagggaaa tatcaacgtt ctcgccgtgc caggcgtcca
    31561 gcatctgctg gctaaaactg tccgttccca gcgccgttac gtaatgaacg gttaatgccg
    31621 caggatcgac ctgacgggcg atatagacgg aagtgttcag ggtatcgccg ccgaaaccgc
    31681 gcttaacgtc cgcgcctttc tcggaaagct caatcatgca ttcgccaatc acggcaatct
    31741 ttttggacat agtcgtgaac ctgatctgta aaaaattagc gttagtttgc gctgtggtgg
    31801 tttgctggtc aacaatatta aaacagtgtt ccattatttt tttgagccag aacgtattcc
    31861 tgaaagattc cgttgtggag tgaggaaatt taccccggcc aggcggtaaa gttctgccct
    31921 tacgcgccga taatctttgt cgagtccggg cagcatcact tttaaacaca ggacatcttt
    31981 gatgataagg caggttatcc agcgaataag caaccctgaa gcaagcatcg agagcttgca
    32041 ggaacggcgt ttttggttgc agtgtgagcg tgcttacacc tggcagccga tctatcaaac
    32101 atgcgggcgg ttaatggccg tggagctatt aacggtggtc acgcatccct tgaacccttc
    32161 gcaacgcctg ccgccggatc gctattttac tgaaatcacc gtcagccatc ggatggaggt
    32221 tgtgaaagag cagattgatt tgctggcgca aaaagccgac ttctttatag agcacggcct
    32281 gctggcatcg gtcaatattg atggccctac gctcatcgcc ctgcgtcagc aaccaaaaat
    32341 cctgcgccaa attgagcgtc ttccctggct gcgtttcgaa ctggtggagc atatccgtct
    32401 gccgaaagat tcaacctttg cctcgatgtg tgaatttggc ccgctgtggc tgggtgattt
    32461 tggtaccggg atggcaaatt tctctgcact aagtgaagtg cgttatgact acatcaaaat
    32521 cgcgcgagaa ctgtttgtga tgctgcgtca gtcgccggaa ggacgcacac tcttttctca
    32581 gcttttacat ctaatgaatc gctattgtcg cggggtgatt gttgagggcg tagaaacgcc
    32641 ggaagagtgg cgtgatgtac agaactcgcc cgcattcgcc gcacaaggct ggtttctttc
    32701 acgcccggca ccgatagaaa cgctgaatac ggcggttctg gcgctataag ctgcctcatt
    32761 ttccgcctgg ctggactatc tttaggactg gcacaggaag aatatgagga agcgaacgat
    32821 gagcaaggca ggcaaaataa ctgctgcgat ttcaggggct ttcttgttgt tgattgtcgt
    32881 ggcgatcatt ttgattgcaa cttttgactg gaatcgactc aaaccgacca tcaaccagaa
    32941 agtctctgcg gagttgaatc gtccgttcgc tatccgtggc gatctgggcg tggtgtggga
    33001 gcggcaaaaa caagaaactg gctggcgcag ctgggtgccg tggcctcatg tacatgcaga
    33061 agacatcatt cttggcaatc caccggatat tcccgaagtc acgatggtgc atttgccgcg
    33121 agtagaggca acgctggcac cgctggcgct gctgaccaaa acggtctggc tgccgtggat
    33181 caagctcgaa aagcccgacg cgcgcctgat tcgcctctcc gaaaagaaca ataactggac
    33241 gtttaatctc gccaacgatg ataacaaaga cgcgaatgca aagccgtcgg catggtcgtt
    33301 tcggctggat aatattcttt tcgatcaagg gcggatcgcc attgatgaca aagtaagcaa
    33361 agcggatctg gaaatttttg ttgatccgtt aggcaagccg ctgccgttca gcgaagttac
    33421 tggatcgaaa ggtaaagcgg ataaagaaaa ggtgggcgat tacgtttttg gcctgaaggc
    33481 gcagggacgt tataacggtg aacagctcac gggtacggga aaaataggcg gtatgctggc
    33541 gctgcgtggc gaagggacgc cgtttccggt acaggctgat ttccgttcag gtaatacccg
    33601 tgttgctttt gatggcgtcg tgaatgaccc aatgaagatg ggcggtgtcg atttacggct
    33661 taaattttct ggcgattcac tgggtgatct ctatgaactg acgggcgttc tgctgcccga
    33721 taccccgccg tttgaaacgg atggtcggct ggtagcgaaa atcgacactg aaaaatcgtc
    33781 ggtctttgat tatcgcggtt ttaatgggcg aattggcgat agcgatatcc acggttctct
    33841 ggtctacacc accggaaagc cgcgaccaaa actggaaggt gatgtcgagt cgcggcaatt
    33901 gcggctggcg gacctgggac cgttgattgg cgttgattcg gggaaagggg cagaaaagtc
    33961 gaaacggtct gaacagaaga agggcgaaaa aagcgttcag cctgcgggca aagtgctgcc
    34021 ttatgaccgc ttcgaaaccg ataaatggga cgttatggat gccgatgttc gcttcaaagg
    34081 ccgacgtatc gagcatggca gtagcctgcc gattagcgat ctttctactc atatcatcct
    34141 caaaaatgct gacctgcgcc tgcaaccgct gaaatttggc atggcgggcg gcagcattgc
    34201 ggcgaatatc catctggaag gcgataaaaa gccgatgcag gggcgggcag atattcaggc
    34261 tcgtcgactg aaactgaaag aactgatgcc cgatgtggaa ctgatgcaga agacgctggg
    34321 ggaaatgaac ggtgacgcgg aactacgcgg tagcggtaac tcggtggcgg cgcttttagg
    34381 caacagtaac ggcaacctga aactgttgat gaatgacggg ctggtgagcc gcaacctgat
    34441 ggagattgtt gggctgaatg tcggcaacta cattgtcggt gcgatatttg gtgacgatga
    34501 ggtgcgggtg aactgcgcgg cggcgaatct gaatattgcc aacggcgtag cgcgcccgca
    34561 gatttttgct ttcgatactg agaacgcgtt gattaatgtt accggcacgg caagttttgc
    34621 ttcggaacag ctggatttga ctattgatcc ggagagtaaa gggattcgga ttatcacact
    34681 gcgttcgccg ctgtatgtgc gtgggacgtt taaaaatccg caggctgggg tgaaagccgg
    34741 accgctgatt gcccgtggtg ccgttgcggc ggcactggca acgctggtaa caccggcggc
    34801 ggcgttattg gcactgatct caccttccga aggggaggct aatcagtgtc ggacgatatt
    34861 gtcgcagatg aagaagtgat gaggttggat tgtgtttgct ggtgagttcg ggagcagcgt
    34921 gttcccctca ccctaatcct ctccccaaag gggcgaggag actgttttgt gcgtgttgaa
    34981 acaacgagta ccgcttttcc gttcactttc tgggggaggg ctgttatgtt cgcgatataa
    35041 catctcgctc cgcttttctc cctctccctt tcagggagag ggctggggtg agggtggctg
    35101 cccacacgat acttacaacg actgatgttg cgtctcatgg gtcagcagca gggcgattaa
    35161 cgtcaagcca gccatcgccg ccagatataa ccccaccgca cctaacccgt agttagtctg
    35221 caaccaggct gcgatatacg gcgcaacgga agccccgaga atcgacgata cgttgtaaga
    35281 gaacgatgct ccggtgtaac gcacttctgt cgggaacagc tctggtaaca gcgcgcccat
    35341 cggaccgaag gtcagcccca tcagacttaa ccccagcagc aggaaggcaa aaaccagaat
    35401 cgggttgcca gaaccgagca aagggttaaa ggcgaatagc gcgaacagga tgagcagcgt
    35461 ggtgatgatt accatgcttt tacggcgacc aaaggcatca gccagtaatc cagcgactgg
    35521 caccatcacg ccaaaaccaa taactgccat catcaacatc cacaacactt cgttacgcgg
    35581 caggccaagc ccaactggcg cggcggcggt actaaaggtc atggagtaga ccgtcatgat
    35641 gtaaaacagc gtataggttg ccagcataat gaacgtaccc agtacggtta cgcgaacatg
    35701 tttggtcagc agcgtaccca gcgggatctt cacctgtttt ttcgctttag cgactttctc
    35761 aaacaccggc gactcatgca gcgacacgcg aacatacagg ccgataatga ccagcaccgc
    35821 cgagaagata aatggcacac gccagcccca gctcataaac tgctcgtcgg tcagtagcca
    35881 ggaaagcagc aagaaagtgc cgttggcaaa gaagaagcca atcggtgcgc ccagctgcgg
    35941 gaaggagccg tacaatgcac gtttgcgcgg tggggcgttt tcagtcgcca gcagcgccgc
    36001 gccgccccat tcaccaccta agcccagacc ctgaccaaat cgagccagcg ccagcagcag
    36061 cggggcgaaa ataccaatcg tggcatagcc tggcagcaga ccaatcacca cggtcgaaat
    36121 ccccatcgtt agcaacgagg cgaccagcgt cgctttacgc ccaacgcgat cgccaaaatg
    36181 accaaaaacg gcagagccaa tggggcgcgc gacgaaggcg atggcgaagg tggcgagcga
    36241 ctgtagcgtt gctgccgtag gatcgccctg cgggaagaag atatgcggaa acacaataac
    36301 ggccgcagtg gcgtaaatgt aaaagtcgaa gaactcaatg gctgtgccaa tgagagaggc
    36361 gacaaggact ttattacgcg agttgatcgg cgtgtattct tgctcgtggt cgagtgttgt
    36421 ggctgttgct tgcataatct tttcttattt tttggctaac gaatagccat attacgcaca
    36481 gcaaaagcga tatttcaatg tgtaacaaat cgcggaaatg gtcaaaaacc aggcaaaaag
    36541 gggataatgt ttaggccagt gatttttctt ctatgaaatg cttcacataa ttttataaat
    36601 agtggataaa actggtttca ggttaaataa aagttaccaa ctggatttat atgctggggt
    36661 tatgagttag aatgaaattg tttgctccca aatagatggc tgaagaggct ctggggacga
    36721 gtttcaagag gttatgtgcg cattatagcc ggatgcgatg ctggcgcatc ttatccggcc
    36781 tacggggagc caggccgaat aaaatcgtat gccggataag gcgtttacgc cgcatccggc
    36841 ctattttaag gctgcgtttt ccctagcatt cgcgggtcgt ctttatattc ggcggtggca
    36901 atccacgccg cgcaaaacag cgtcaaacgg gcgaagaagt agaaaaatgc catcagcccc
    36961 agcacggaac caaatgctgc gccagagggg gatttcatca gcgatggcag ggtgtaggtc
    37021 atcacgattt taatcacttc aaaaccaata gcagccagaa atgttccgcg aatcagggct
    37081 tttttgcgcg gacggtggcg cggcaaccgc cagaagatcc agaagaaaag cagatagttg
    37141 gcgaagatgg aaatcgccag gccaatcaat cgccacgtcg gtttcagcca ctcaatgctg
    37201 ttcaggtgca gggcgctaat aatcatttgc tgcgccgaac cggcaaccga ggtgatcgaa
    37261 agcgtcacaa tcagcgcaat caacaaacca atcagtgaaa taaaatcacg cagatatttt
    37321 acccagaact tctcctgatc ttgcggcgag cgttcccaga catcacgcga ctgggcacga
    37381 atcgcttcac gcaggttacc catccagttg atgccggaat aaagtgccac cgccaggccg
    37441 acaagcccta cagtcgtacg ctgctgaacg gcggtgttga tggtgttttt caacgtggcg
    37501 gctagtgtcg gatcgctgat gttttgcaga attttgtcga agatatcctg tagcaacatc
    37561 ggatgggagg ccagcacaaa gccccctgcg gcaaacgaca ccatcaaaat cgggatcatc
    37621 gacaaaaatg agaaataggt gatagccgca ccaaactggt tacccagccg atcgttaaag
    37681 cgttctgtcg cgcgaatcag gtgcgcaata accggttggc gttggacttt ttcggcagtg
    37741 gtggtgacgg tttccagcgc ctggctaact ttgccgcctt tctcgctatt atccaactgc
    37801 ttaatcggct cgagctccag atcctgggtg ggacgtttga tctcgttttc ctgcgtcatc
    37861 cgctcttttg tccttctgtc gtggtcattc ttaaaaagta tagtcggtca gtccaggtgc
    37921 tctttcatta cgccagccag ccactgcata aacaggttta cacgccggga aagctcccga
    37981 cgctgcgggt aaaccagcga aagggagagc ggctcggcac ggtagccagg taatacttca
    38041 ataagccgcc cggcacgcag ggcttcgcgc acggcaatgc gcgggatctg aataatcccc
    38101 agaccggcaa gaccggcggc gagatagttt tcgctactat ttaccgtcaa catgccgcca
    38161 gacttaaacc actggacgcc attaacgctg gcaacctcaa aacctaacgg atgtacaccc
    38221 aggtgcggtg tataacgcac tattgcgtgt gaagtcagat catcggggct ttgcggataa
    38281 ccaaagcgcg tcagatagtg cggactggca cagttgacca tggtcagttt gccgagggga
    38341 cgggcgataa cgccatcttc cggtaacgcg ccagtgcgta tcacgcaatc aaaaccatca
    38401 tgaagaatat ctaccggacg gtcatggcta ctcagttcca gctcaattcc cggatgcaga
    38461 tagagaaatt ccgacaggcg cggcagtaac aggtttttcg cgattcctgg cgggatgtcg
    38521 atgcgtaatt taccgctgat actggtggca tcctgttgaa acagaccgtc cagttcgttg
    38581 agattactca acacatcttt tgcccgttga taataggtca tgccttctgg cgtgagtttg
    38641 acccgtcgcg tggtgcgctg gagaagctgg gtgccaagtt gatgttccag tgcctgtatc
    38701 tggcgcgaaa cacttccctt tggcaaagca aagaaatccg ctgcgcggga aaaactttcc
    38761 agctccgcga ctttgatgaa caactgcatt gcgtgaattt tatccatttc tttgaccgat
    38821 tgttgttcac agcgaaacag taacgcgcat atcgcattgt ttattgtttt ttctaacatc
    38881 taatgccggg tttcacaatg ttgtcatgac gaatgtggcg atttctcagc aggaaaaggg
    38941 cggaatagct ttatgagaaa ggtgaatccc cttaaacaga gcgtattttt cagtgattcc
    39001 ctttaaagtg aatagaggac gtattggcta tttgtgctta tttttgtctc attgccattt
    39061 gttattttgg cttgtagtcg cggaatttca tttttaattg catgcgtact aaccaccaat
    39121 ataaggaaat cctcaaaatt gttttaaata gtgccctcga catgtaattt caggcgttta
    39181 gctgtaacta tttatatcgg taactatttt ctacgcgtca tctctgtaga atggccaccg
    39241 ccaaatggcg aattcttatt ttttctcgcg ggtaataccc ttccactact taagtctttt
    39301 taacatattc aggtggagat tcagttatgc aaatagtcat gtttgacagg cagtcaatat
    39361 ttattcatgg aatgaaaatc agtttacagc agcgtattcc aggggtgagt attcaggggg
    39421 ccagtcaggc agacgagtta tggcaaaagc tggaaagtta ccctgaagcc ttagttatgc
    39481 tcgatggcga tcaggatggt gagttttgct actggttgct gcaaaaaacc gtggtgcagt
    39541 ttcctgaggt taaggtgtta atcacggcga cggattgcaa taaacggtgg ttacaggaag
    39601 ttatccattt taatgtgctg gccattgtgc ctcgtgattc aaccgtcgag acatttgcgt
    39661 tggcggtaaa tagtgcggcg atggggatga tgtttctgcc tggagactgg cggacgacgc
    39721 cggaaaagga cattaaagat ctcaaatcgt taagcgcccg ccagcgggag attttaacca
    39781 tgttagcggc gggcgagtca aataaggaga tcggcagagc gctgaatatc agtaccggaa
    39841 cggtaaaagc gcatctggaa tccctgtatc gccgtctgga agtgaaaaat cgcacccagg
    39901 cggcaatgat gttaaatatc tcctcctgaa gaggataatt ttacagccag caggaagtta
    39961 gcggctggct gtaaaaatat tatggttcgc cgtacaaacc aattaaacgg cgtaccacac
    40021 cgttagtcca gccaaaccca tcctgcaacg gatactcgcc accgccgcct tcgcgtggaa
    40081 caccatcggc aatatggtat ttttcgatca gtttgtgctg ttccagatag aactgattca
    40141 ccgtcttcag ccagcttcgc gcgatttcat cacccagaag gtcatcgccg tacattttaa
    40201 atccctgaat cgccatccat tgtaacggtg cccagccgtt gggtttatcc cactgttcac
    40261 cggtttcgta ctcgcttgcc agaatcccgc caggtgtcag taaccgactg cgcacggcat
    40321 ttgccagacg atcggcctgt tcatggttcg ccataccgac atagagtggc acaatggcgg
    40381 cagcggaaaa cagcgccagt tgttcgcgtc gccagtcgta atcgcggtag atgccgtttt
    40441 catcatccca gaggtaacgc tttaccgcat cgcgacgggc actggccttc tggcggaaca
    40501 gtgcttctgt ctctttctcg cctttcagcg ccgagatgtt ggcgatggcg ctctccagtt
    40561 taaacaggaa ggcattcaga tcgatgggga tgaactgggt ggtacgaata ctcgccagac
    40621 gaccagtatc acgcagccaa cgggaagagt aatcccaacc ggaggccgcc cccgctcgta
    40681 aatcgcggta cacctcgttg ggcgggcgac cagaatgttt cgcggtttca acgtcctcaa
    40741 gccaggattc gtcacgcggc gtgtcgcgat cgtcccagta acggttgagc agcgatccgt
    40801 ccggcatccg cacaacatgg cgataggcct gattagggat caacgattct gcaccgtcca
    40861 tccagaaggc atattccatt ttcaggtggt cgagatagcg gcgcgcaccg cgtacaccat
    40921 cttcttcaaa caactccacc atcagcgcaa aaaccggtgg ttgcgagcgg ctcaaataat
    40981 aggtgcggtt gccgttgggg atgtgaccgt agttttcgat catccaggcg aagttatcgg
    41041 ccatgcattt cagcaaatct tcccgaccac tttccgccag ccccagcatg gtgaaatagg
    41101 aatcccaata gtaggtttcg ctaaaacggc cgcccgggac aatatatgac tgcggtagcg
    41161 ccagcagaga agaccacgga atgtgatcct gtggttcgcg ggttagcacc ggccacagct
    41221 ggtcgatatg ctctttcagg gaattttgcg ggtccgatac atactcgctg gagtagacct
    41281 ccggcagcca gaagtgattt tcaacaaact tgcgcaagtc aaaatcacga tgacggcgca
    41341 ctttacggta gcggattaaa atatccagcg ggtccatttt gggtgcgcag tcgggaaagg
    41401 ttttactgtc ggggaaaatt ttcgccgact gaacatgctc gaacagttcg agatagcgat
    41461 cggcaggcgt cagcgcatca gaggcgggca gcccttcaat catctcgggt tccggttctg
    41521 cctcgatcat ctcatccagt tttaattcat acgggtccag ttcatagcag agatcgactt
    41581 cgatcatcag ttcgtctgga ttagggtttt gaattttctg attgagcata aggatccaac
    41641 ctccgaaatt cgtcgctaat tatcggcttt tctttaaggg tagtcattcg ctccgcctgg
    41701 tgggcgacaa agcgtgcggt ggatcacgtt tattaacttg tcaaaaaata taacgcacta
    41761 atatcaatgg aatttataaa aatacggatt tggtgttgtt tttcattttc agaacattca
    41821 atcctgctct cgccgcaatc atgatatgcc attcctgatc tgggtaatag gcacaggcta
    41881 tcttattgat agtttatatt catgtaattg attgattcct atcaaaaagc gtatctccct
    41941 gttttttatg atggctttgt ctcgcagaga cgtttgcagc attctggaaa attttctggg
    42001 tcacaataac tcaccaccgt gagggaagaa taatgaaaat ggtctcacgt attaccgcga
    42061 tcggcctggc tggcgtcgcg atttgctatt tagggttatc tggttatgtg tggtaccacg
    42121 ataataaacg cagtaaacag gccgatgttc aggcatctgc tgtcagtgaa aataataagg
    42181 ttttaggctt tctccgcgaa aaaggatgcg actattgcca cacgccttcg gcagaattac
    42241 ccgcctatta ttatattcct ggcgcgaaac agttgatgga ttacgacatt aagcttggat
    42301 ataaatcttt taacctcgag gccgtgcgtg cggcactgct ggctgataaa cccgtttcgc
    42361 aaagcgatct gaataagatt gaatgggtga tgcagtatga aactatgcca ccaacgcgtt
    42421 ataccgcgct acactgggcg ggtaaggtga gtgatgaaga gcgggcggaa atactggcct
    42481 ggattgcaaa acagcgcgcg gaatattacg ccagcaatga tactgctccg gagcatcgca
    42541 atgaaccggt gcagcccatc ccgcaaaaac tgcctaccga tgcgcaaaaa gtggcgttgg
    42601 gctttgcgct gtatcacgat ccccgtttat cggctgatag caccatttca tgcgctcatt
    42661 gccatgcgtt gaatgcgggg ggcgtcgatg gcagaaaaac atcgattggt gttggtggcg
    42721 cagttgggcc gattaacgcg ccgacggtat ttaactcagt atttaacgtt gagcagttct
    42781 gggatggtcg tgcggcaaca ttgcaggatc aggcaggtgg accgccgttg aacccgattg
    42841 aaatggcgtc gaaatcctgg gacgaaatta ttgctaagct ggaaaaagat ccgcagctta
    42901 aagcgcagtt cctcgaagtt tatccgcaag gtttcagtgg cgaaaatatt actgatgcca
    42961 ttgctgaatt tgagaaaaca ttaattacgc cggattcccc atttgataaa tggttgcgtg
    43021 gagatgaaaa tgcgctgacg gcgcaacaga aaaaaggcta tcaattattt aaagataata
    43081 aatgtgcaac ttgtcatggt ggtattattc tcggcggacg ttcctttgaa ccgttggggc
    43141 tgaaaaaaga ctttaacttt ggggaaatta cggcggcgga tattggtcgt atgaatgtga
    43201 ctaaagaaga gcgtgataaa ttgcgccaga aagtacccgg tttacgtaac gttgctttaa
    43261 cggcaccgta cttccatcgc ggtgacgtgc cgacgctgga cggggcggtg aaactgatgc
    43321 tgcgctatca ggtaggcaaa gagctgccgc aggaggatgt ggatgatatc gtagctttcc
    43381 tgcacagtct gaacggggtg tacacgccgt atatgcagga taaacaataa ctaatttgat
    43441 cgcccgaaca ggaatgtttg ggcgattttt attacgataa taaagtctgt ttttaatatt
    43501 atcatgttaa atgtttatat tataaaaagt cgtttttctg cttaggattt tgttatttaa
    43561 attaagcctg taatgccttg cttccattgc ggataaatcc tactttttta ttgccttcaa
    43621 ataaatttaa ggagttcgaa atggaccaga agctgttaac ggatttccgc tcagaactac
    43681 tcgattcacg ttttggcgca aaggccattt ctactatcgc ggagtcaaaa cgatttccgc
    43741 tgcacgaaat gcgcgatgat gtcgcatttc agattatcaa tgatgaatta tatcttgatg
    43801 gcaacgctcg tcagaacttg gccactttct gccagacctg ggacgacgaa aacgtccata
    43861 aattgatgga tttgtcgatc aa
//
LOCUS       DADKRT010000008        42213 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.008, whole genome shotgun sequence.
ACCESSION   DADKRT010000008 DADKRT010000000
VERSION     DADKRT010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 42213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42213
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.008"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..418)
                     /gene="yeeE"
                     /locus_tag="JQ356_000398"
     CDS             complement(<1..418)
                     /gene="yeeE"
                     /locus_tag="JQ356_000398"
                     /inference="COORDINATES: protein motif:HMM:NF016064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HAY4620592.1"
                     /translation="MTYEAGAFPWPGTVIGGYIFGLGIVLAGGCATGTWYRAGEGLIG
                     SWIALFTYMVMSAVMRSPHASGLNQTLQHYSTEHNSIAETFNLSVWPLVAVLLVITLW
                     VVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVT"
     gene            complement(428..610)
                     /locus_tag="JQ356_000399"
     CDS             complement(428..610)
                     /locus_tag="JQ356_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001467426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HAY4620593.1"
                     /translation="MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYA
                     LLIAISVQSVGVFALI"
     gene            complement(789..2147)
                     /gene="plaP"
                     /locus_tag="JQ356_000400"
     CDS             complement(789..2147)
                     /gene="plaP"
                     /locus_tag="JQ356_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HAY4620594.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYRVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            complement(2137..2199)
                     /gene="yoeI"
                     /locus_tag="JQ356_000401"
     CDS             complement(2137..2199)
                     /gene="yoeI"
                     /locus_tag="JQ356_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HAY4620595.1"
                     /translation="MGQFFAYATVITVKENDHVA"
     gene            complement(2414..3343)
                     /locus_tag="JQ356_000402"
     CDS             complement(2414..3343)
                     /locus_tag="JQ356_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4620596.1"
                     /translation="MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESD
                     LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
                     FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQHFLDSGALIEKKVVAQTLFEPVWIGWNEQ
                     TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI"
     gene            complement(3389..4213)
                     /locus_tag="JQ356_000403"
     CDS             complement(3389..4213)
                     /locus_tag="JQ356_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY4620597.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG
                     IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGSGDEFYLQAVQELVDSALAH
                     RIPRIIFTSSTSVYGDAQGMVKETTPRNPVTNSGLVLEELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
     gene            complement(4296..4550)
                     /gene="yoeB"
                     /locus_tag="JQ356_000404"
                     /pseudo
     CDS             complement(4296..4550)
                     /gene="yoeB"
                     /locus_tag="JQ356_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707909.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YoeB"
     gene            complement(4547..4798)
                     /gene="yefM"
                     /locus_tag="JQ356_000405"
     CDS             complement(4547..4798)
                     /gene="yefM"
                     /locus_tag="JQ356_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoeB-YefM toxin-antitoxin system antitoxin YefM"
                     /protein_id="HAY4620598.1"
                     /translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE
                     YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE"
     gene            5081..5131
                     /gene="hisL"
                     /locus_tag="JQ356_000406"
     CDS             5081..5131
                     /gene="hisL"
                     /locus_tag="JQ356_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HAY4620599.1"
                     /translation="MTRVQFKHHHHHHHPD"
     gene            5277..6176
                     /gene="hisG"
                     /locus_tag="JQ356_000407"
     CDS             5277..6176
                     /gene="hisG"
                     /locus_tag="JQ356_000407"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HAY4620600.1"
                     /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
                     GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     gene            6182..7486
                     /gene="hisD"
                     /locus_tag="JQ356_000408"
     CDS             6182..7486
                     /gene="hisD"
                     /locus_tag="JQ356_000408"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HAY4620601.1"
                     /translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
                     ARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ
                     KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLC
                     SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
                     RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAAD
                     MARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRN
                     ARDLVDGITSAGSVFLGDWSLESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
                     QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA"
     gene            7483..8553
                     /gene="hisC"
                     /locus_tag="JQ356_000409"
     CDS             7483..8553
                     /gene="hisC"
                     /locus_tag="JQ356_000409"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HAY4620602.1"
                     /translation="MSIVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
                     FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA
                     ILYCPPTYGMYGVSAETIGVECRTVPTLDNWQLDLQGISDKLEGVKVVYVCSPNNPTG
                     QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
                     AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAER
                     ECLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL
                     RITVGTREESQRVIDALRAEQV"
     gene            8553..9620
                     /locus_tag="JQ356_000410"
     CDS             8553..9620
                     /locus_tag="JQ356_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase"
                     /protein_id="HAY4620603.1"
                     /translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ
                     KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
                     CRKPKVKLVERYLAEQAIDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGE
                     QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI
                     NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            9620..10210
                     /gene="hisH"
                     /locus_tag="JQ356_000411"
     CDS             9620..10210
                     /gene="hisH"
                     /locus_tag="JQ356_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HAY4620604.1"
                     /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL
                     PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
                     EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
     gene            10210..10947
                     /gene="hisA"
                     /locus_tag="JQ356_000412"
     CDS             10210..10947
                     /gene="hisA"
                     /locus_tag="JQ356_000412"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HAY4620605.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYATQGAE
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
                     STAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTG
                     VRGVIVGRALLEGKFTVKEAIACWQNA"
     gene            10929..11705
                     /gene="hisF"
                     /locus_tag="JQ356_000413"
     CDS             10929..11705
                     /gene="hisF"
                     /locus_tag="JQ356_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015853929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HAY4620606.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
                     DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL
                     DWVQEVQKRGAGEVVLNIMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
     gene            11699..12310
                     /locus_tag="JQ356_000414"
     CDS             11699..12310
                     /locus_tag="JQ356_000414"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HAY4620607.1"
                     /translation="MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK
                     TIESGKVAFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLLLVNPIGPTCHKGTS
                     SCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ"
     gene            complement(12407..13384)
                     /gene="wzzB"
                     /locus_tag="JQ356_000415"
     CDS             complement(12407..13384)
                     /gene="wzzB"
                     /locus_tag="JQ356_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310855.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HAY4620608.1"
                     /translation="MRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIAL
                     AIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRYSTA
                     FSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETPEGAQKQLAKYIQQVDDQVN
                     EELGKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQ
                     QTEDVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIDNLDVDKLDIHA
                     YRYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK"
     gene            13793..14797
                     /locus_tag="JQ356_000416"
     CDS             13793..14797
                     /locus_tag="JQ356_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015572392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HAY4620609.1"
                     /translation="MKFLVTGAAGFIGFYLSKRLLAAGHQVVGIDNLNDYYDVNLKQA
                     RLDLLKHDNFSFYKIDLADREKMAALFADERFERVINLAAQAGVRYSLENPNAYADAN
                     LIGFLNILEGCRHNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANEL
                     MAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFT
                     YIDDIAEAIIRLQDVIPEKNPQWAVETGSPATSSAPYRVYNIGNSSPVELMDYINALE
                     EALGIEANKNMMPLQPGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWYRNFYKV
                     "
     gene            complement(14863..16029)
                     /gene="ugd"
                     /locus_tag="JQ356_000417"
     CDS             complement(14863..16029)
                     /gene="ugd"
                     /locus_tag="JQ356_000417"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HAY4620610.1"
                     /translation="MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKRQSP
                     LVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIATPTDYDPKTNYFNTSSVEAVIR
                     DVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
                     GEQSERAKRFAALLQEGAIKQDIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI
                     VDANRTRKDFIADSILARKPKVVGVYRLIMKNGSDNFRASSIQGIMKRIKAKGVPVIV
                     YEPAMKEDDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND"
     gene            complement(16278..17684)
                     /gene="gndA"
                     /locus_tag="JQ356_000418"
     CDS             complement(16278..17684)
                     /gene="gndA"
                     /locus_tag="JQ356_000418"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HAY4620611.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIT
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
                     TFFHDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELIAPILTKIA
                     AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQT
                     FTEWNNGELSSYLIDITKDIFTKKDEEGNYLVDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKEQRVAASKVLSGPQAQPAGDNAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY
                     FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRIDKEGVFHTEWLD"
     gene            complement(17789..18622)
                     /locus_tag="JQ356_000419"
     CDS             complement(17789..18622)
                     /locus_tag="JQ356_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001016535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HAY4620612.1"
                     /translation="MNHRLEKFSVLISIYKNDLPQFFEVALRSIFHDQTLKPDQIVIV
                     ADGELHQTHIDIINSFIDDVGNKIVTFVPLPRNVGLANALNEGLKACRNELVARMDAD
                     DISLPHRFEKQISFMINNSEIDVCGSFIDEIETVTEEFISTRKVPLEHREIVKFARKR
                     SAVSHPSVIFRKNTVLAVGGYPPFRKSQDFALWSLLIVHNARFANLPDILLKMRTGRN
                     LMARRGLSYLLYEYKVLYYQYKIGFIRKNELISNAMLRTFFRIMPSKLKELMYSIVRN
                     R"
     gene            complement(18619..19488)
                     /locus_tag="JQ356_000420"
     CDS             complement(18619..19488)
                     /locus_tag="JQ356_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HAY4620613.1"
                     /translation="MDTVYAVLVAYNPEHNDLKNAVELLLRQVTKVVVCNNSTNGYKY
                     AENSSGDVKIFNFNDNLGIAEAQSIGMKWAFENGADFILQMDQDSIPDPKMVEQLLTC
                     YKKLLKQNVNVGLVGSQDFDKVTGELNKARVKKGKPLTEVYYEVDSTLSSGSLIPKNS
                     WLIVGGMKDELFIDAVDHEYCWRLRAAGFKVIRNKNALLAHRLGDGRFKILNILSVGL
                     PSPFRHYYATRNIFLLLNKNYVPIYWKISSLVKLIGKVFLYPIFLPNGNKRLYFFLKG
                     INDGLMGRSGKMK"
     gene            complement(19505..20692)
                     /gene="wzy"
                     /locus_tag="JQ356_000421"
     CDS             complement(19505..20692)
                     /gene="wzy"
                     /locus_tag="JQ356_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O147 family O-antigen polymerase"
                     /protein_id="HAY4620614.1"
                     /translation="MTSDFYNSKDKSLSVLLFFGFIFFLTRSFPFIQYSWIMEGFLCL
                     CIMSFTKKIANGIYHYPVILIFLLALFINFIYSYIKGNDIAIIIRFYIIILFILCAYF
                     CSYGTISIVKIFLYLMVLQAVIISIISIYMTKTYGIGDYSALRHYFLENDYGDVYTYG
                     SGFYRVQIKGNALIPFAFMLHIVIKDYFYYRFKNTITVILAIGTIVAGNFAYFVSICL
                     FFMYIILCSKSNSRYAKLRKIIFGVFLTVILPFFITYSIELIIMKSNGADSSLGVRWD
                     QFTVLINDLTESVSNFVIGSGLGNVIKIQTPIRDYSAYIYYELQSVYFLNQLGVILFT
                     LFLLINLLLTIKIIKYSELCVLYFLYVSYAITNPYILDSNHVAVIIVLVTLSNVLKKM
                     KAK"
     gene            complement(20748..21980)
                     /gene="wzx"
                     /locus_tag="JQ356_000422"
     CDS             complement(20748..21980)
                     /gene="wzx"
                     /locus_tag="JQ356_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000029423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O147 family O-antigen flippase"
                     /protein_id="HAY4620615.1"
                     /translation="MSIVKNTLWNISGYIIPSLIAIPALGILSRILGTEQFGLFTLAI
                     ALVGYASIFDAGLTRAVIREVSIYKNVHKELRAIISTSTVILTILGLIGGSVLFLSSN
                     VIVKLLNINANHVVESVKAIYIISATIPLYLLNQVWLGIFEGMEKFRKVNLIKSINNS
                     FVAGLPVIFCFFHGGLLSAIYGLVMARVLSLIVTFIFSRKLIISSGLSVKIVTVKRLI
                     GFGSWITVSNIISPIMTYMDRFILSHIVGADKVSFYTAPSEGIQRLTILPSALSRAIF
                     PRLSSELQSVKQTKILSYFIMVIGILPIVMLIIILSDFIMSAWMGPTYHGTPGIVLKI
                     LAIGFFFNCIAQIPFVSVQASGRSKITAIIHLLEVIPYLCILYIFIYHWGIVGAAIAW
                     SVRTSLDFLILLLIDTKY"
     gene            complement(21977..22534)
                     /gene="rfbC"
                     /locus_tag="JQ356_000423"
     CDS             complement(21977..22534)
                     /gene="rfbC"
                     /locus_tag="JQ356_000423"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HAY4620616.1"
                     /translation="MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVE
                     FVQDNHSKSSKGVLRGLHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVN
                     LSAENKRQLWIPEGFAHGFLVLSETAEFLYKTTNYYHPDSDRGIVWNDPILSIKWPTI
                     EHNNYILSIKDARAKELHNMKELFL"
     gene            complement(22539..23417)
                     /gene="rfbA"
                     /locus_tag="JQ356_000424"
     CDS             complement(22539..23417)
                     /gene="rfbA"
                     /locus_tag="JQ356_000424"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY4620617.1"
                     /translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL
                     MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPTPDGLAQAFIIGEEFIGG
                     DDCALVLGDNIFYGHDLPKLMDVAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISL
                     EEKPLQPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMM
                     GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAYRKGFIDAEQVKALAEPL
                     KKNAYGQYLLKLIKGY"
     gene            complement(23475..24374)
                     /gene="rfbD"
                     /locus_tag="JQ356_000425"
     CDS             complement(23475..24374)
                     /gene="rfbD"
                     /locus_tag="JQ356_000425"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HAY4620618.1"
                     /translation="MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPE
                     GVAETVKRIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVESIAKEANEVGAWVIHY
                     STDYVFPGNGDTPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAAKGN
                     NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAS
                     GTTTWHDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFA
                     LVLPDWQVGVKRMLNELITTTAI"
     gene            complement(24374..25459)
                     /gene="rfbB"
                     /locus_tag="JQ356_000426"
     CDS             complement(24374..25459)
                     /gene="rfbB"
                     /locus_tag="JQ356_000426"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY4620619.1"
                     /translation="MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA
                     DVSDSERYVFEHADICDAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIV
                     GTYVLLEAARNYWSALDSDKKTRFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTA
                     YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG
                     KALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDL
                     LDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKISRELGWKPQETFESGIRKTLEWY
                     LSNTKWVDNVKSGAYQSWIEQNYEGRQ"
     gene            complement(25832..26725)
                     /gene="galF"
                     /locus_tag="JQ356_000427"
     CDS             complement(25832..26725)
                     /gene="galF"
                     /locus_tag="JQ356_000427"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalF"
                     /protein_id="HAY4620620.1"
                     /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV
                     RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
                     QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS
                     ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGAKFRKGIEKLLSE"
     gene            complement(26957..27952)
                     /locus_tag="JQ356_000428"
     CDS             complement(26957..27952)
                     /locus_tag="JQ356_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY4620621.1"
                     /translation="MNNNVLLIGASGFVGTRLLETAIADFNIKNLDKRQSHFYPEITQ
                     IGDVRDQQALDQALAGFDTVVLLAAEHRDDVSPTSLYYDVNVQGTRNVLAAMEKNGVK
                     NIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQAEEVLREWYNKAPTERSLTIIR
                     PTVIFGERNRGNVYNLLKQIAGGKFMMVGAGTNYKSMAYVGNIVEFIKYKLKNVAAGY
                     EVYNYVDKPDLNMNQLVAEVEQSLNKKIPSMHLPYPLGMLGGYCFDILSKITGKKYAV
                     SSVRVKKFCATTQFDATKVHSSGFVAPYTLSQGLDRTLQYEFVHAKKDDITFVSE"
     gene            complement(28110..29504)
                     /gene="wcaM"
                     /locus_tag="JQ356_000429"
     CDS             complement(28110..29504)
                     /gene="wcaM"
                     /locus_tag="JQ356_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HAY4620622.1"
                     /translation="MPFKTLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD
                     WIASFKQAFSEGHTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGS
                     QVTGEEGGSMHNITLDVRGSDCTIKGLAMSGFGPVTQIYIGGKNKRVMSNLTIDNLTV
                     SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCT
                     NGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIK
                     ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF
                     RVNNIQLDNTHLVYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHLFMRNIKV
                     MQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAMNERGQSSVDIDRINHHIV
                     NVEKINFRLPERRE"
     gene            complement(29515..30735)
                     /gene="wcaL"
                     /locus_tag="JQ356_000430"
     CDS             complement(29515..30735)
                     /gene="wcaL"
                     /locus_tag="JQ356_000430"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HAY4620623.1"
                     /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEILALQKGDTQN
                     THAAWTKYNLAARTHWLQDELTGKIAKLRHRASQTLRGIYRKNTWQALNLKRYGAESR
                     NLILSAICGQVATPLHADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREV
                     LNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA
                     PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
                     LHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLGTDELAPVVKRAREKVEHDFNQ
                     QVINRELASLLQAL"
     gene            complement(30732..32012)
                     /gene="wcaK"
                     /locus_tag="JQ356_000431"
     CDS             complement(30732..32012)
                     /gene="wcaK"
                     /locus_tag="JQ356_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
                     /protein_id="HAY4620624.1"
                     /translation="MKLLILGNHTCGNRGDSAILRGLLDAINILNPQAEVDVMSRYPV
                     SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNI
                     AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
                     FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDF
                     TASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQV
                     IALSTCTGIDSYNKDDRMMALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT
                     RLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
                     LPALNARLSEAVSRERQTGMQMVQSVLERIGEVK"
     gene            complement(32288..33766)
                     /gene="wzxC"
                     /locus_tag="JQ356_000432"
     CDS             complement(32288..33766)
                     /gene="wzxC"
                     /locus_tag="JQ356_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M-antigen undecaprenyl disphosphate flippase"
                     /protein_id="HAY4620625.1"
                     /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
                     TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGLVVCLAVFLLSDLI
                     GDVLNNPDLAPLIKTLSLAFVVIPQGQQFRALMQKELEFNKIGMIETSAVLAGFTFTV
                     VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTA
                     DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
                     DDTEKLRINFYKPLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQFLCVVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
                     INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
                     VQIAAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG"
     gene            complement(33768..35108)
                     /gene="wcaJ"
                     /locus_tag="JQ356_000433"
     CDS             complement(33768..35108)
                     /gene="wcaJ"
                     /locus_tag="JQ356_000433"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HAY4620626.1"
                     /translation="MVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQML
                     GGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYGLTS
                     IGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYH
                     DPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLL
                     IPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLC
                     CIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKV
                     GNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPCITG
                     WAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY"
     gene            complement(35213..36583)
                     /gene="cpsG"
                     /locus_tag="JQ356_000434"
     CDS             complement(35213..36583)
                     /gene="cpsG"
                     /locus_tag="JQ356_000434"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase CpsG"
                     /protein_id="HAY4620627.1"
                     /translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG
                     GDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF
                     GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP
                     NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
                     KNPGAKIIHDPRLSWNTVDVVTAAGGTSVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
                     FRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLAQPVEAINR
                     VEQHFSRDALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTRTL
                     LTLLNE"
     gene            complement(36776..38212)
                     /gene="cpsB"
                     /locus_tag="JQ356_000435"
     CDS             complement(36776..38212)
                     /gene="cpsB"
                     /locus_tag="JQ356_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanyltransferase"
                     /protein_id="HAY4620628.1"
                     /translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
                     KRHSPENDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
                     IRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK
                     KYRPDILDACEKAMSSVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG
                     WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFADRYGRV"
     gene            complement(38215..39438)
                     /gene="wcaI"
                     /locus_tag="JQ356_000436"
                     /pseudo
     CDS             complement(38215..39438)
                     /gene="wcaI"
                     /locus_tag="JQ356_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310882.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
     gene            complement(39435..39914)
                     /locus_tag="JQ356_000437"
     CDS             complement(39435..39914)
                     /locus_tag="JQ356_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
                     /protein_id="HAY4620629.1"
                     /translation="MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLPGKRTNRPAQGY
                     WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHY
                     VVLGFRFRVAEEELLLPDEQHDDYRWLTPDALLASDNVHANSRAYFLAEKRAGVPGL"
     gene            complement(39917..40882)
                     /gene="fcl"
                     /locus_tag="JQ356_000438"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
     CDS             complement(39917..40882)
                     /gene="fcl"
                     /locus_tag="JQ356_000438"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /EC_number="1.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HAY4620630.1"
                     /translation="MSKQRIFIAGHRGMVGSAIKRQLEQRGDVELVLRTRDELNLLDS
                     RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL
                     LFLGSSCIYPKLAKQPMAESELLQSTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS
                     VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
                     AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK
                     PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRG"
     gene            complement(40885..42006)
                     /gene="gmd"
                     /locus_tag="JQ356_000439"
     CDS             complement(40885..42006)
                     /gene="gmd"
                     /locus_tag="JQ356_000439"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HAY4620631.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYCESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIVTGVQYSVRQFVEMAAAQLGIKLRF
                     EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLDDPTKAHEKLGWK
                     PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES"
     gene            complement(42032..42205)
                     /locus_tag="JQ356_000440"
     CDS             complement(42032..42205)
                     /locus_tag="JQ356_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005113733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase"
                     /protein_id="HAY4620632.1"
                     /translation="MIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPVNVVCRG
                     NPAVVIRERVETE"
BASE COUNT        11058 a        10726 c         9743 g        10686 t
ORIGIN      
        1 cagtgacaaa gggatgccag cgtttttcaa acagaatatg agcgatcccg gttcggcgcg
       61 gcggtaaggt cgcgactttg agttttggct tcttcaactc tttcatcacc acccagagcg
      121 ttatcaccag caaaacggca accaacggcc acacagacaa attaaaagtc tcagcaatag
      181 agttatgttc agtactgtag tgctgcaagg tttgatttaa accactggca tgtggagaac
      241 gcatcaccgc actcatcacc atataagtga aaagcgcgat ccaactgccg atcaatccct
      301 cacccgcgcg ataccaggtc ccggtggcac atccacccgc cagaacaatt cccagcccga
      361 agatataccc acctataaca gtaccaggcc acgggaacgc cccggcttcg taagtcagta
      421 ggcccgccta aattaacgca aaaaccccca cactttgtac cgaaattgca atcagcaagg
      481 cgtaaaacat gcgattattt ttcgcgatat acatatcgcg aaaaccacca gtcaggcaaa
      541 aacgcccacg ctgcatgaca aatcccagca gagcaccaca aattagcccg cttaatatca
      601 ttgaaaacat aaattaatta accagatgaa tgttaatgag gaaattattc atgactggtg
      661 gaatgcagac caataaccaa attctctaaa ttagaacaaa tggttcttaa tgaggatttc
      721 gataaaaaag aataaaaaaa ccggagccaa atattcattc gactccggtt gattattaga
      781 aaagatgatt atgctacgtc ttcgtactgc ggaaccgggt tacggaagct cttggtgacg
      841 caagccaggt aaatcagacc gatagcagcc cagatcagac ccagaaccat tgagctttct
      901 tccaggttaa cccacagcgc accaacggtc agcgcaccac acatcggcag gaacagatac
      961 tggaagtgat ctttcagcgt cttattacgc ttctcacgga tccagaactg cgagatgacc
     1021 gacaggttaa cgaaggtgaa cgccaccagc gcaccaaagt taatcagcgc cgttgccatt
     1081 accaggtcga agttgattgc cagcagggca atcgcgccaa ccaggatgat gttcatcgcc
     1141 ggagtacgcc atttcgggtg tacataaccg aagaagcttt tcgggaatac gccgtcacga
     1201 cccattacgt acatcagacg cgctacgcct gcatgcgccg ccataccgga cgccagtacg
     1261 gtaatggtgg agaagatcag cgcgccaacc tggaacgctt tacccgcaac gtacagcatg
     1321 atttcaggct gtgacgcatc cggatcttta aagcgagaga tatccgggaa gtacagctgc
     1381 aggaagtaag ttgcaaagat gaagatcatg ccgccgatca gcgcggtcag gaaaatcgca
     1441 cgcgggatca cgcgctctgc atctttggtt tcttccgaca ggttgctgat gccgtcaaag
     1501 ccggtaaagg agaagcacag gattgtcgcc ccggtaatca tcgggataac atgcgcatcg
     1561 ccagaccaga atggacgagt gctcgccagc gtaccagcgc cttcaccttc aaatacgcga
     1621 taaacaacca tgcccagaat caccgcgatc agcaccacct gcaacacgac gattacagtg
     1681 ttgaagttcg ctacggattt cagactacgc aggttaaagg cggtcatgaa ggccaccaac
     1741 gccaccacaa acatccacga tgggatggaa ggcaccagag cttcaaaata gattttcgcc
     1801 agcagaatgt tgatcatcgg cgcgaacaga tagtcgagca gagaagacca acccaccata
     1861 aagccgacag tcgggctaat ggatttctgg gcgtaagtgt atgcagagcc agcagaagga
     1921 tagcggcgaa ccagcttccc gtagctcaga gccgtaaaca ggatcgcaat caatgcgaac
     1981 gcataggctg tcggcacatg accatccgtg aggcctgaaa cgataccaaa agtatcaaac
     2041 agcgtcatcg gctgcatata ggcaagaccc atcattacaa ccggaactaa cgtaagcgtt
     2101 ttacgcaatt ccacgcgaga ggtgtttgga gtaacgttat gcgacatggt cattctcctt
     2161 tacggtgata accgtcgcgt aagcaaaaaa ttgccccatt tttttggatt cctcagcgac
     2221 aacaactgtc gatttttagt aaatatctat ccggtacgaa gcccggcctc ttggtatgaa
     2281 tgattggttt gaagcaaaaa ataaccgacg ctgatgaaac gtcggttttt agtcattttt
     2341 tgacagcggc gcattgtgcc taaatggggg ggaaatgaca agagaatgag aggcttgtca
     2401 taataatttt tctttaaatg gctgattttc cgtcatcaga ttttgcataa acaccggcga
     2461 tcgcactatt tgctaaaatt tcatcccgcc accagccact ggcaagtcct gcggtctgtt
     2521 cattccagcc aatccagacg ggttcaaaga gagtttgggc gaccactttc ttctcgatta
     2581 acgcgccact atcgagaaaa tgttgcgcca gataacgggg taaatagccg cagccgaggc
     2641 cgctaatttg cagctccagc ttggttttaa aatcgaaaac ggtaatggct tcttgttcgt
     2701 cgagaagttg tgaggccgta gaagcgcctg cctgcgcagt atcccccacc acaatcgccc
     2761 gatatcgctt aataatacga cgatttaacg gctcttcttc cagggctaac ggatgatgag
     2821 gcgcgaccgc aaagacttgt tccagatcgc ccaaccgtga aaaaccaaac tcactggaag
     2881 atggtggctc atgcatcgcg ccaacaataa tatccgctcg cccctgagtc agggcatccc
     2941 atgaaccacc cagtacgcca ttgataaact tcaggcgcgt cacgctatga tgttgataaa
     3001 aagcttcaat cagtggcgct agcagagaaa aaggaaacgt gtcgtccacg ccaatcacca
     3061 gctcgttttc ccagccttca tgcagtttga tcgcctgctt ttccagttcc cgcacggtat
     3121 gcagaacttc ccgccctttc tctaataaca tttttccggt gcgggtgaat ttagcgcggt
     3181 gaccgctacg atcaagcaat tgaatattaa ggtcgctttc cagcttgtga acggtgtaac
     3241 tcagagcgga cggcgtcttg tagagtttgg ccgacgccgc cgcaaaactg ccttcttttt
     3301 ctaaggcatc gaggatcatc aacacatcca gcagtggttt catacacgcc cccttgcagt
     3361 gtatgcggcg tcctgctggc gtgatcgttt actccagcgg cattaccagc ggatcgggat
     3421 actggtattc aaatcccagt tcattacaaa tccgactgcc atcaataatc ttacctttgc
     3481 cgctgtccag actatttctg aactgcggag gttccagccc cagtaaacgg gccatctgcg
     3541 gatagaaaac attacgcgca gggtgagctg gcgcacatat attatagatg tgtccgcctt
     3601 taggtgcctg taacaacaga gtgatagcgc caataacatc ttctaaatgg actaaattaa
     3661 caccatgttc accatcaggc gcggtttttc cggcaaagaa gcgtccggga tgacgccccg
     3721 gtccgaccag gcccgcaaga cgcagaatat cgaccgaagt accgggtaaa ttgtgcagcc
     3781 agtcttcgag ttcttctaat actagtccac tgttggttac cggattacgc ggggtagttt
     3841 ctttcaccat gccttgcgca tcgccataga cagatgttga gctggtaaaa ataattcggg
     3901 gaatacgatg ggccagcgcg ctatccacta actcttgtac cgcttgtaaa tagaactcat
     3961 cgccggagcc gctacgacgt gccggaagcg taatgaccag tgcatcggca tccatcaggg
     4021 catccagatc gtcagaatcg caaactaact caggctccat gcgaagcaga tagctatcaa
     4081 tgccactcat tcgggccgct tcgacaccat cttgtgtggt tttactcccg gtgacttgcc
     4141 agcctcgcgc tgaaagtgac atcgccagcg gcatgcctaa ccaccctaac ccgacaattg
     4201 cgaccttttt catccgttat ctcctgatac accttagatc tataaggcta cgctagcgta
     4261 tcaaaactga caattcattc tatgaatgaa tctgttcaat aatgataacg acatgctgca
     4321 atgagcagtg aatcgtcggt aaccgcgtat accagacggt gctcctctgt aatgcgtcgg
     4381 gactagaaac ctgacaaatt atgtttcagg ggttctggct tccccttacc ttcaaatggc
     4441 gttctgcggg tatctttgat aagttcattg atctttttaa caattcgctt atctgtttcc
     4501 tgccagtaca gataatcatc ccatgattcc tcagaccaga ttagtttcac tcaataatgt
     4561 ccttttctgt tcctttgcct gatttcaggc tatcgattga gtccatcaat ctccgggcgt
     4621 tagcggggga acgcagtaga taagccgtct cttccagcga gttgtattct tcgagtgaca
     4681 tcagaacaca agcctctcca ttctgacgag taataaggat cggggcatga tcttcaacgg
     4741 ctttcatcat tgttgccgac aaattctgac gcgcttcgct gtagctaatt gtacgcatgt
     4801 caatctcctc ttttgtacag ttcattgtac aatgatgggc gttaattaac tatttattaa
     4861 ttagtttgta gatcaaggta ttgtcagtga gacgaaaatc caggcttcgc tatttttggt
     4921 gccgtcagct tagaggacag tcctcttagc cccctccttt ccccgctcat tcattaaaca
     4981 aatccatcgc catagaatat ataaaaaagc ccttgctttc taacgtgaaa gtggtttagg
     5041 ttaaaagaca tcagttgaat aaacattcac agagactttt atgacacgcg ttcaatttaa
     5101 acaccaccat catcaccatc atcctgacta gtctttcagg cgatgtgtgc tggaagacat
     5161 tcagatcttc cagtggtgca tgaacgcatg agaaagcccc cggaagatca ccttccgggg
     5221 gcttttttat tgcgcggttg ataacggttc agacaggttt aaagaggaat aagaaaatga
     5281 cagacaacac tcgtttacgc atagctatgc agaaatccgg ccgtttaagt gatgactcac
     5341 gcgaattgct ggcgcgctgt ggcattaaaa tcaatcttca cacccagcgc ctgatcgcga
     5401 tggcagaaaa catgccgatt gatattctgc gcgtgcgtga cgacgacatt cccggtctgg
     5461 taatggacgg cgtggttgac ctcgggatta tcggcgaaaa cgtgctggaa gaagagctgc
     5521 ttaaccgccg cgcccagggt gaagatccac gctactttac cctgcgtcgt ctggatttcg
     5581 gcggctgccg actttcactg gcaacgccgg ttgatgaagc ctgggatggc ccgctctcct
     5641 taaacggtaa acgtatcgcc acctcttatc ctcacctgct caagcgttat ctcgaccaga
     5701 aaggtatctc ttttaaatcc tgcttactga acggttctgt tgaagtcgcc ccgcgtgccg
     5761 gactggcgga tgcgatttgc gatctggttt ccaccggtgc cacgctggaa gctaacggcc
     5821 tgcgcgaagt cgaagttatc tatcgctcga aagcctgcct gatacaacgc gatggcgaaa
     5881 tggaagaatc caaacagcaa ctgatcgaca aactgctgac ccgtattcag ggtgttatcc
     5941 aggcgcgtga atcaaaatac atcatgatgc acgcaccgac cgaacgtctg gatgaagtca
     6001 tcgccctgct gccaggtgcc gaacgcccaa ctattctacc gctggcgggt gatcaacagc
     6061 gcgtagcgat gcacatggtc agtagcgaaa ccctgttctg ggaaacgatg gaaaaactga
     6121 aagcgctggg tgccagttca atcctggtcc tgccgattga gaagatgatg gagtgatcgc
     6181 catgagcttt aacacaatca ttgactggaa tagctgtact gcggagcaac aacgccagct
     6241 gttaatgcgc ccggcgatct ccgcttctga aagcattacc cgcactgtta acgatattct
     6301 cgataacgtg aaagcacgcg gcgatgaggc cctgcgggaa tacagcgcga agtttgataa
     6361 aaccacggtt accgcactga aggtgtctgc tgaggaaatt gccgccgcta gcgaacgcct
     6421 gagcgacgag ctaaaacagg cgatggcggt ggcagtgaag aatattgaaa ccttccacac
     6481 tgcgcaaaaa ctgccgccgg tagatgtaga aacgcagcca ggcgtgcgtt gccagcaggt
     6541 cacgcgcccg gtcgcttcag ttgggttgta tattcctggc ggctccgccc cgctcttctc
     6601 aacggtatta atgctggcga ctccggcgcg tattgcgggc tgtaaaaaag tggtgctgtg
     6661 ctcaccgccg ccgattgccg atgagatcct ttatgcggcg cagctgtgcg gtgtgcagga
     6721 cgtgtttaac gtcggcggcg cacaggccat tgccgcactg gcgtttggta cggaatctgt
     6781 gccgaaagtg gacaaaatct tcgggccggg caacgccttt gtcaccgaag cgaaacgtca
     6841 ggtgagccag cgtctggacg gtgcggcgat cgatatgccc gcaggcccgt cggaagtgtt
     6901 ggtcattgcc gacagtggcg caacgccgga tttcgtggct tctgatttgc tttctcaggc
     6961 tgaacacggc ccggactcac aggtgatttt actgacgccc gctgctgata tggcgcgtcg
     7021 cgttgccgag gctgtcgaac gccagctggc agaactgccg cgtgctgaaa ccgcccgtca
     7081 ggcactgaac gccagccgcc tgatcgtgac taaagattta gcgcagtgcg tagagatctc
     7141 caaccagtac ggcccggagc acctgatcat ccagacccgc aacgcccgcg atctggtcga
     7201 tggcattacc agtgccggtt cggtatttct tggtgactgg tcactggaat cggcaggtga
     7261 ttacgcctcc ggcaccaacc acgttctgcc gacttacggt tacaccgcca cctgttccag
     7321 cctcgggctg gcagatttcc agaagcgcat gaccgtgcag gaactgtcga aagaaggttt
     7381 ctccgcgctg gcttcgacca ttgaaacatt ggccgccgcc gagcgcctga ccgcccataa
     7441 aaatgccgtt actttacgtg ttaacgccct taaggagcaa gcatgagcat cgtgactatt
     7501 accgatttag cgcgtgaaaa cgtgcgcaac ctgacgccgt atcagtcggc gcgtcgtctg
     7561 ggcggtaacg gcgatgtctg gctgaacgcc aacgaatatc ccacagccgt ggaatttcag
     7621 cttactcagc aaacgctcaa ccgctacccg gaatgtcagc cgaaagcggt gattgaaaat
     7681 tacgcgcaat atgcaggcgt aaaaccggaa caggtgctgg tcagccgtgg cgcggacgaa
     7741 ggtattgaac tactgattcg cgctttttgc gaaccgggta aagacgccat cctctactgc
     7801 ccgccaacgt acggcatgta cggcgtcagc gccgaaacca ttggcgtcga gtgccgcaca
     7861 gtgccgacgc tggacaactg gcaactggat ttacagggca tttccgacaa gctggaaggc
     7921 gtaaaagtgg tctatgtttg cagccccaac aacccgaccg ggcaactgat caatccgcag
     7981 gattttcgca ctctgctgga gttaacccgc ggtaaagcga ttgtggttgc cgatgaagcc
     8041 tatatcgagt tttgcccgca ggcatcgctg gctggctggc tggcggaata tccgcacctg
     8101 gctattttgc gcacactgtc gaaagctttt gctctggcgg gccttcgttg cggatttacg
     8161 ctggcaaacg aagaagtcat caacctgctg atgaaagtga ttgcccccta cccgctctcg
     8221 acgccggttg ccgacattgc ggcccaggcg ttaagcccgc aggggatcgt cgccatgcgt
     8281 gagcgggtgg cgcaaattat tgcagaacgc gaatgcctga ttgccgcact gaaagagatc
     8341 ccctgcgtgg agcaggtttt cgactctgaa accaactaca ttctggcgcg ctttaaagcc
     8401 tccagtgcag tgtttaaatc tttgtgggat cagggcatta tcttacgtga tcagaataaa
     8461 caaccctctt taagcggctg cctgcgaatt accgtcggaa cccgtgaaga aagccagcgc
     8521 gtcattgacg ccttacgtgc ggagcaagtt taatgagtca gaagtatctt tttatcgatc
     8581 gcgatggaac cctgattagc gaaccgccga gtgattttca ggtggatcgt tttgacaaac
     8641 tcgcctttga accgggcgtg atcccggaac tgctgaagct gcaaaaagcg ggctacaaac
     8701 tggtgatgat cactaatcag gatggtcttg gaacacaaag tttcccgcag gcggattttg
     8761 atggcccgca caacctgatg atgcagatct tcacctcgca aggcgtgcag tttgatgaag
     8821 tgctgatttg cccgcacctg cccgccgatg aatgcgactg ccgtaagccg aaagtaaaac
     8881 tggtggagcg ttatctcgct gagcaagcga tagatcgcgc caacagttat gtgattggcg
     8941 atcgcgcgac cgatattcaa ctagcagaaa acatgggcat tactggttta cgctacgacc
     9001 gcgaaaccct gaactggccg atgattggcg agcaacttac caaacgagac cgttacgccc
     9061 atgtagtgcg caacaccaaa gagacgcaga ttgacgttca ggtgtggctg gatcgcgaag
     9121 gtggcagcaa gattaacacc ggcgttggct tctttgatca tatgctggat cagatcgcca
     9181 cccacggcgg tttccgcatg gaaatcaacg tcaaaggcga cctctatatc gacgatcacc
     9241 acaccgtcga agataccggc ctggcgctgg gtgaagcgtt aaaaattgcc ctcggcgata
     9301 aacgcggtat ttgtcgcttt ggttttgtgc tgccgatgga cgaatgcctt gcccgctgcg
     9361 cactggatat ctctggtcgc ccgcacctgg aatataaagc tgaatttacc taccagcgcg
     9421 tgggcgatct cagcaccgag atgatcgagc acttcttccg ttcgctctct tacaccatgg
     9481 gcgtgaccct gcacctgaaa accaaaggta aaaacgatca ccaccgtgta gagagcctgt
     9541 tcaaagcttt tggtcgcacc ctgcgccagg ccatccgcgt ggaaggcgat accctgccct
     9601 cgtcgaaagg agtgctgtaa tgaacgtggt gatccttgat actggctgcg ccaacctgaa
     9661 ctcggtgaag tctgccattg cgcgccacgg ttatgaaccc aaagtcagcc gtgacccgga
     9721 cgtcgtgttg ctggccgata aactattttt acccggcgtt ggcaccgcac aagcagcgat
     9781 ggatcaggtg cgtgagcgcg agctgtttga tctcatcaaa gcctgtaccc aaccggtgct
     9841 aggcatctgc ttagggatgc aactgctggg gcggcgcagc gaagagagca acggcgtcga
     9901 tttgctgggc atcatcgacg aagacgtgcc gaaaatgacc gactttggtc taccgctgcc
     9961 ccatatgggc tggaaccgcg tttacccgca ggcaggcaac cgcctgtttc aggggattga
    10021 agacggcgcg tacttttact ttgttcacag ctacgcaatg ccagtcaatc cgtggaccat
    10081 cgcccagtgt aattacggcg aaccgttcac cgcggcggta caaaaagata acttctacgg
    10141 cgtgcagttc cacccggagc gttctggtgc cgctggcgct aagttgctga aaaacttcct
    10201 ggagatgtga tgattattcc ggcattagat ttaatcgacg gcaccgtggt gcgtctccat
    10261 cagggcgatt acggcaaaca gcgcgattac ggtaacgacc cgctgccgcg cttacaggat
    10321 tacgccacgc agggtgccga agtgttgcat ctggtggatc tgaccggggc aaaagatcca
    10381 gcaaaacgtc aaatcccgtt gattaaaacc ctggtcgcgg gcgttaacgt tccggtgcag
    10441 gttggcggcg gcgtgcgtag cgaagaagac gtggcggcgt tactggaagc gggcgttgcg
    10501 cgcgtggtgg tcggctccac cgcggtgaaa tcaccagaaa tggtgaaagg ctggtttgaa
    10561 cgtttcggtg ccgatgcctt agtgctggcg ctggatgtcc gtattgacga gcaaggcaac
    10621 aagcaggtgg cagtcagcgg ctggcaagag aactcgggcg tttcactgga acaactggtg
    10681 gaaacctatc tgcccgtcgg cctgaaacat gtgctgtgta ccgatatctc gcgcgacggc
    10741 acgctggcag gttctaacgt ctctttatat gaagaagtgt gcgccagata tccgcaggtg
    10801 gcatttcagt catccggcgg cattggcgac attaacgatg ttgctgccct gcgtggcact
    10861 ggcgtgcgcg gcgtaatagt tggtcgggca ttattggaag gtaaattcac cgtgaaggag
    10921 gccatcgcat gctggcaaaa cgcataattc cgtgtctcga cgttcgtgat ggtcaggtgg
    10981 tgaaaggcgt acagtttcgc aaccatgaaa tcattggcga tatcgtgccg ctggcaaaac
    11041 gctacgccga agaaggtgca gacgaactgg tgttctacga tatcaccgct tccagcgatg
    11101 gccgtgtggt agataaaagc tgggtatctc gcgtggcgga agtgatcgac attccgttct
    11161 gcgtggcggg tgggattaag tctctggaag atgccgcgaa aattctttcc tttggcgcgg
    11221 ataaaatttc catcaactcg cctgcgctgg cggatccgac gttaattact cgcctggcgg
    11281 atcgttttgg cgtgcagtgt attgtggtgg gtattgatac ctggtacgac gctgaaaccg
    11341 gtaaatatca tgtgaatcaa tataccggcg atgaaagccg cacccgcgtc actcagtggg
    11401 aaacgctcga ctgggtacag gaagtgcaaa aacgcggtgc cggagaagtc gtcctcaaca
    11461 taatgaatca ggacggcgtg cgtaacggtt acgacctcga acaactgaaa aaagtgcgtg
    11521 aagtttgcca cgtcccgcta attgcctccg gtggcgcggg caccatggaa cacttcctcg
    11581 aagccttccg tgatgccgac gttgacggcg cgctggcagc ttccgtattc cacaaacaaa
    11641 taatcaatat tggtgaatta aaagcgtacc tggcaacaca gggcgtggag atcaggatat
    11701 gttaacagaa caacaacgtc gcgaactgga ctgggaaaaa accgacggac ttatgccggt
    11761 gattgtgcaa cacgcggtat ccggcgaagt gttaatgctg ggctatatga acccggaagc
    11821 cttagacaaa accatagaaa gcggcaaagt cgccttcttc tcgcgcacta aacagcgact
    11881 gtggaccaaa ggcgaaacgt cgggcaattt cctcaatgtg gtgagtattg caccggactg
    11941 cgacaacgac acgttactgt tactggtgaa tcctatcgga ccaacctgcc ataaaggcac
    12001 cagcagctgc ttcggcgaca ccgctcacca gtggctgttc ctgtatcaac tggaacaact
    12061 gctcgccgaa cgcaaatctg ccgacccgga aacctcctac accgccaaac tgtatgccag
    12121 cggcaccaaa cgcattgcgc agaaagtggg cgaagaaggc gtggaaaccg cactggcagc
    12181 gacagtacat gaccgctttg agctcaccaa cgaggcgtct gatttgatgt atcacctgct
    12241 ggtgctgttg caggatcagg atctggactt aacgacggtg attgagaacc tgcgtaaacg
    12301 gcatcagtga gttgcggggt aagcggatgc gatattgttg tagcatccgg aaaaaaaaac
    12361 gggcaaggtg tcaccaccct gccccttttc tttaaaaccg aaaagattac ttcgcgttgt
    12421 aattacgcag agcgttacgc cccaagacaa tccccgcgcc aaccatgccg cccagcagca
    12481 ccgccagaat caaggtaatt gcctttttcg ggctatcgcg acgaataggt aacgtcggtt
    12541 tcattacata gcggtaagca tgaatatcaa gtttatcaac gtcaagattg tcgatatcca
    12601 gcaggttttg acgagtctga tagtagtttg gtgagaacac caacggacga gtcgcttcat
    12661 gcttaatcat cgactccagc gcttcgctcc ccaaaaggaa caacgtatct tgtgtcacat
    12721 cttcagtctg ctgaacctgt ggctttgtca cctgcgcctg attcgcatac tgcaacgctt
    12781 cctgaatctg acggatacgc agatctttct gctcctgcgc aactacttcc tgagttttca
    12841 gagaatcctg caagtttttc atacgcagcg cgatgttgtc tttcaggtct tttcccagtt
    12901 cttcatttac ctggtcgtca acttgctgga tatacttcgc cagctgcttc tgagcacctt
    12961 caggtgtttc accaacataa gacaccgcta aaggtaatga ctgatttttg acggtaggct
    13021 caatggtcag cttttctgct tcttcctggt tatccagcgt ttccgctaat gctgagaatg
    13081 cagtgctgta acgtccgata agtgaagcct gaatgtcgga gactttcggt acagccgatc
    13141 cgtagatcac attcatcgcg ttggtataac cagcgatttg ccccacatca ggttgagtaa
    13201 cgatagctgt ggaagtccac ttttctttgg caacggccag ataccctata gccagggcaa
    13261 tagcaacaat gacagagatg ataattgtca tcttgccacg ccacaactgc accagtaaat
    13321 caatcaaatc aatctgttcc ggatcatggt tttgcccaga aacattatta ttttctactc
    13381 tcatcattac cctaacggac gaaataattt taagtcgcca tagtttagcg ataatcgcca
    13441 tgaatgctat aggataaatg ataaaaataa tgaattatta caaaggaaac ataagagaat
    13501 cagggcgaaa atcgccatga taacaggatg ttagtcactg ccaaagagat cgcgggtgta
    13561 gactttgtct gccacatcct taagctcttc tgccatacgg ttggagataa tgacgtcggc
    13621 ttgtatagtc agcttagaac agctttgatt gtaaaatgag cacgttacca gaaaaaacag
    13681 ccaagtttag aactgatacc gattatcttt ttttcttgtc taacggtata atttaacttt
    13741 cagttatgcc agatgaagat tggctatatt ctagcctgag cgaggattat aaatgaaatt
    13801 tctggttacg ggagctgctg gctttatcgg tttctatcta agtaaacggc ttcttgcagc
    13861 tggtcatcag gttgtaggca ttgacaactt aaatgattat tacgatgtca acctcaaaca
    13921 agcacgactt gatttactca agcacgacaa cttcagtttt tataaaattg acctggccga
    13981 tcgtgagaaa atggcggcac tgtttgcaga cgagcggttc gaacgcgtaa taaacctcgc
    14041 tgcgcaagcc ggtgtacgtt actctcttga aaatcccaat gcatatgcag atgcaaacct
    14101 gattggattc ctgaacatac tagaaggatg tcgccataat aatgttcagc atctacttta
    14161 cgcttcctcc agttctgttt atggcatgaa ccgcaagatg cctttctcta cagatgactc
    14221 tgtagatcat cctgtttcgc tttatgcagc aactaaaaaa gcgaatgaac tcatggccca
    14281 tacatattct catttgtatg gcttaccgac cacagggctg cgtttcttta cggtttatgg
    14341 tccatgggga cgtccggata tggcattatt taaattcact aaagccatgc tggaaggtaa
    14401 aagcattgat gtttacaact tcggcaaaat gaagcgtgac tttacttaca ttgatgatat
    14461 tgccgaagct attattcgct tacaggatgt tattccagaa aaaaacccac agtgggctgt
    14521 agaaacaggc tcgcctgcaa caagttcagc accatatcgt gtctataaca ttggtaatag
    14581 ttcgcctgtg gagttgatgg actatatcaa tgcgttagaa gaggctctgg gtattgaagc
    14641 caacaaaaat atgatgcctc tccaacccgg tgatgtactg gaaaccagtg ctgatacaaa
    14701 agcactgtat gacgtaatag gattcaaacc tgaaacgtca gttaaagaag gggtaaagaa
    14761 ctttgtagaa tggtatcgta acttctataa agtttgattt tacaaaacca taagaaaagg
    14821 ccctaattta ttagggcctt ttcttagaat gaaacaaaat aattaatcat tgccaaacaa
    14881 gtcgcgcgta taaactttat ctgctacatc agccagatcg gcagacatac ggttagaaat
    14941 aataacatca gcttcttgtt tgaacgcatc cagatcacgt accacgcgcg accggaaaaa
    15001 atcgtcctct ttcatagctg gctcataaac gattacaggc acacctttcg ccttgattcg
    15061 cttcataata ccctgaatcg aggaagcacg aaaattgtct gaaccattct tcataatcaa
    15121 acgatagacg ccaacaactt tcggtttacg tgcaaggata gaatcggcaa taaaatcttt
    15181 gcgcgtgcgg ttggcgtcaa caattgccga gatcaggtta ttcggcacag actggtaatt
    15241 tgccagtaac tgcttagtat ctttcggcag acaataacca ccataaccga atgacgggtt
    15301 gttgtagtga ttaccgatac gcgggtcaag gcatacgccc tcaataatct ggcgtgaatt
    15361 aagtcccagg ctttcagcat aactatcaag ttcattgaaa tacgctacac gcatcgccag
    15421 ataagtgttc gcaaaaagtt taatcgcctc agcctcggtt gagtcagtaa acaatgttgg
    15481 tatgtcttgc ttaatggcgc cttcctgtaa taacgcagca aaacgtttag cgcgttcaga
    15541 ctgctcgcca atcacaatgc gtgatgggtg taagttatca taaagtgctt taccttcacg
    15601 caaaaactca ggcgaaaaga tcacattttc aataccaaaa cgttctttaa tggactctgt
    15661 aaaaccaaca gggatagttg attttataat cattaccgcg ttgggattaa tttctgtcac
    15721 atcacgaatg accgcttcca cgcttgaggt attaaaataa tttgttttcg gatcataatc
    15781 ggtaggtgtg gcaataataa cgtaatcggc atttttatac gcgtcatact tatctgtcgt
    15841 agcgcggaaa ttgagatctt tagtcgccag atactcttca atctccttat caacaagcgg
    15901 tgactgcctc ttgttaagca tgtccacttt ggcctgaacg atatccagtg caaccacttc
    15961 gtggttttgc gcaatcagaa taccatttga aagaccaaca taacctgttc ctgaaattgt
    16021 tattttcatt agctctgact tcttccggtt aaacatttag agtggtcatt aatccaccac
    16081 caccgcttca tctactgcgg gatttttaac gctgatgtag atgaactgtc aaggcagcga
    16141 tcctgctgtg cggcgctgta ttatatcgcg tttttaacta taaattataa aaaaaggccc
    16201 taacctgccg ctttgtataa taaaaaagcc cggagggttt ctccgggcct tgctttgatt
    16261 aattgattta aatcagatta atccagccat tcggtatgga acacaccttc tttatcaatg
    16321 cgcttataag tatgcgcacc gaaatagtca cgctgtgcct ggatcaggtt cgcaggcaga
    16381 acagcggcgc ggtagctgtc gtaataggca accgcagcgg cgaaggtcgg caccgggata
    16441 ccgttctgta ctgcgtaagc gacgacatcg cgcagcgcct gctggtagtc atcggcaatt
    16501 tgcttgaagt aaggagccag caacaggtta gcgatctgcg gattttcggc ataagcatcg
    16561 gtgattttct gcaggaactg cgcacggatg atgcagccag cacggaaaat cttcgcgatt
    16621 tcaccgtagt tcagatccca gttgtactct tcagacgcag cgcgtagctg agagaagccc
    16681 tgagcgtaag aaacgatttt gcccagatac agcgcacggc gaactttttc gatgaactca
    16741 gcattgtcgc cagctggctg cgcttgcggg ccagagagaa ctttagatgc ggcaacacgc
    16801 tgctctttca gagaagagat ataacgtgca aacacagact cggtaatcag cgacagcggt
    16861 tcgccgagat ccagcgcgct ctggctggtc catttgcccg tacctttgtt tgctgcttca
    16921 tccagaatca catcaaccag gtagttaccc tcttcatctt ttttggtgaa gatatctttg
    16981 gtgatgtcga tcaggtagct gctcagttca ccgttattcc actcggtaaa ggtctgcgcc
    17041 agttcttcgt tggtgaggtt caagccacct ttaagcagag aataggcttc agcaatcagc
    17101 tgcatatcac cgtattcaat accgttgtga accatcttca cataatgacc tgcaccatcg
    17161 gcaccaatat aggtaacgca cggttcgccg tcttcagcca cagcggcgat tttggtcagg
    17221 atcggcgcaa tcagttcata agcttctttc tgcccaccag gcataatgga aggacctttc
    17281 agcgcacctt cttcaccacc ggaaacaccg gtaccgataa agttaaagcc ttctgcagaa
    17341 agctcacggt tacgacgaat ggtgtcatgg aagaaggtgt taccaccatc aatgatgatg
    17401 tcacctttat cgaggtatgg cttgagggaa tcaatagcag catccgtgcc agcacctgct
    17461 ttcaccatta acaggatgcg acgaggcgtt tccagagatt caacaaattc tttcaccgta
    17521 tagtaaggaa ccagtttctt gcctggattt tcggtaatca cttcttcggt cttttcacgg
    17581 gaacggttga aaatagagac ggtataacca cggctttcga tattgagcgc aaggttgcgc
    17641 cccatcactg ccataccgac gacgccgatc tgttgctttg acattgttta ctcctgtcag
    17701 gataccgctg ggtggtatgc gggttatgct taattataga atatgcctaa taaaaataaa
    17761 tccataacac ttaatcagaa aattattatt atcgattcct aacgattgaa tacatcagct
    17821 cctttaattt agatggcatt atacgaaaaa atgttctcaa catagcatta cttattaatt
    17881 cattttttcg aataaaacca attttatatt gataatacaa tactttatac tcgtacaata
    17941 aatatgacaa tccacgtcga gccataagat tacgaccagt tcgcattttt aataaaatat
    18001 ctggaagatt tgcaaatctt gcattatgta caattaatag gctccacaat gcaaaatctt
    18061 gagattttct gaatggagga taaccaccaa cagctaatac tgtattcttt ctaaaaatta
    18121 cagaaggatg gctaactgcg cttcgtttcc tcgcgaattt aactatttct ctatgttcga
    18181 gaggcacttt gcgtgttgaa ataaactcct cagtaacagt ttcaatttca tcaataaaac
    18241 tgccacatac atctatttct gaattattaa tcataaaaga aatttgtttc tcaaaccgat
    18301 gaggcaaaga aatatcatca gcatccattc ttgccactaa ctcattccta caagccttta
    18361 atccttcatt taaggcatta gccaatccaa catttctagg taaaggtaca aatgttacta
    18421 ttttattgcc aacatcatca atgaatgaat ttataatatc gatgtgtgtt tgatggagtt
    18481 ctccatctgc aacaattact atttgatctg gcttaagtgt ttgatcgtga aaaatagagc
    18541 gtagagccac ctcaaaaaat tgcggtagat catttttata aatgctaatt aaaactgaga
    18601 atttttctaa tctatgattc atttcatttt accacttcga cccattaaac cgtcattaat
    18661 gccttttaaa aaaaaatata accttttatt accatttgga aggaaaatag gatataaaaa
    18721 aacctttcca attaatttaa ccagactaga aattttccag tagatgggta cataattttt
    18781 atttaataaa agaaagatat ttcgagtagc ataataatga cgaaatgggc ttggcaaacc
    18841 gacagaaaga atatttaaga tcttaaatcg cccatctcca agtctatgtg caagtaacgc
    18901 atttttattc ctaattactt taaacccagc agctcttaat ctccaacaat attcatggtc
    18961 taccgcatcg ataaaaagct catctttcat tcctccaaca atcaaccaac tattttttgg
    19021 tattagactg ccagaactta atgtactatc tacctcataa taaacttctg taagtggttt
    19081 cccttttttt acccttgctt tatttaattc accagttact ttatcaaaat cttgtgaacc
    19141 aactaaacca acattgacat tttgtttaag caattttttg taacaagtaa gtaactgctc
    19201 taccatctta ggatcaggaa tactatcctg atccatttgc aatataaaat cagcgccatt
    19261 ttcaaaagcc catttcattc ctatactttg ggcttctgct atgcctaaat tatcattgaa
    19321 attgaatatt tttacatcgc ctgaagaatt ttcagcatat ttataaccat ttgtagagtt
    19381 attgcaaacg acaactttag taacttgtct caacaataat tcaaccgcat tttttaaatc
    19441 attatgttct gggttgtaag caaccaaaac ggcatataca gtgtccatct tcaccttaaa
    19501 accttcattt agctttcatc ttttttagaa cattacttaa tgtcactaat acaattatta
    19561 cagcaacatg gttagagtct aaaatataag gattagtaat tgcataagaa acatatagaa
    19621 aatatagcac acacaactca ctgtatttta tgattttaat cgtgagaagg agattaatta
    19681 ataaaaacaa agtaaataaa ataacgccaa gttgatttaa aaaataaact gactgcaatt
    19741 cataatatat atatgcacta taatcacgga taggagtttg aattttgatg acattaccca
    19801 aaccagaacc tataacaaaa tttgatacag actctgtaag atcattaatt aatacagtaa
    19861 actgatccca tctaactcct aaagaagaat cagctccatt tgatttcatg attatcaact
    19921 caattgaata tgtaataaaa aaagggagaa tcacagtaag aaaaacccca aaaataattt
    19981 tccttaattt agcgtatcgt gagttagatt tagaacatag tataatatac ataaaaaaca
    20041 agcatatcga aacaaaatat gcaaaattac cagccactat agtacctata gccagaataa
    20101 cggttattgt atttttgaat cgataataga aataatcttt tatgactata tgcaacataa
    20161 aggcaaatgg aatgagagca tttcctttaa tttgaactct atagaaacca cttccatatg
    20221 tataaacatc accataatca ttctccaaaa aataatgtct tagtgctgaa taatcaccaa
    20281 taccatatgt ttttgtcata taaatactaa tgatggatat aataaccgcc tgtaatacca
    20341 ttaaatataa aaatatttta acaatcgaga tggttccata agagcagaaa taagcacata
    20401 atataaataa tatgataata taaaacctaa ttattatcgc tatatcgtta cccttgatat
    20461 aggaataaat aaaatttata aaaagagcta atagaaatat taaaataaca ggatagtgat
    20521 atattccgtt tgcaattttc tttgtaaatg acatgataca aagacataaa aacccctcca
    20581 taatccaact atattgaata aatggaaagc tacgtgtaag gaaaaatata aacccaaaaa
    20641 acaaaagaac acttaaactt ttgtcttttg agttataaaa atcagaagtc atgtttgcac
    20701 tctaattaga tgggcttgag gaagtaatcc ctaaaatcaa ttcgctatta atatttcgta
    20761 tcaattaata ataatatcaa aaaatctaac gatgttctta cagaccatgc tattgcggct
    20821 ccaacaattc cccaatgata aataaaaata tataatatgc ataaatatgg gataacttcg
    20881 agcaaatgaa taatagctgt aatttttgat cttccactag cctgaactga aacaaatggg
    20941 atttgtgcaa tgcaattaaa aaagaaacct attgcaagaa tttttaatac tatacctggc
    21001 gtcccatgat atgtaggtcc catccaagcg gacattataa aatctgataa aataattatc
    21061 aacattacaa ttggaagtat accaataacc attataaaat atgataatat tttagtttgc
    21121 tttaccgatt gcaattctga acttaatctt ggaaaaatag ctctggacaa cgcacttggt
    21181 aatatcgtta agcgttgtat accttcagac ggagcagtat aaaaagaaac tttatcagcc
    21241 cccacaatgt gtgaaagaat aaaacgatcc atatatgtca taatagggct aataatattg
    21301 ctaactgtta tccagcttcc aaagccgatt aatcttttaa ctgttacaat ttttacagac
    21361 agcccagatg atattattag ttttcgacta aatataaagg tcactataag tgataagact
    21421 cttgccataa ctaaaccata tatagcactt agtaatcctc catgaaaaaa acagaaaatc
    21481 actggtaatc cagccacaaa agagttgtta attgatttta ttaaatttac ttttctgaac
    21541 ttttccatcc cctcaaaaat ccccaaccag acttggttta acaagtataa gggtatggta
    21601 gctgaaataa tatatattgc tttgacagat tctacaacat gattcgcgtt aatgtttaat
    21661 aatttaacaa ttacattgct actcaaaaat agtacactac cgccaatcaa gcccaatata
    21721 gttagaatta ccgttgaagt tgaaatgatc gctcttaatt ctttatgaac atttttatat
    21781 attgatactt ctcttataac agctctggtc aatccagcat caaaaatact tgcatatcca
    21841 actaaggcaa tagctaacgt aaaaaggcca aattgctcgg tccctagaat tctagacagt
    21901 atacctaacg caggaattgc tattaatgat ggtataatat acccacttat attccataaa
    21961 gtattcttta caatactcac aaaaataatt ccttcatgtt atgcaattct ttagcccttg
    22021 catctttaat cgataaaata taattattat gttctatcgt cggccatttt atgctcagaa
    22081 taggatcatt ccatacaatc cctctatcac tatcaggatg ataatagttc gtcgttttat
    22141 ataaaaattc cgcagtctcg ctcagcacca aaaaaccatg tgcaaatccc tcagggatcc
    22201 acaattgccg cttattctca gcagataaat tcaccccaac ccatttacca aaggtaggcg
    22261 acgatttacg aatatcaaca gctacatcaa aaacctcacc aacaacgcaa cgtaccagtt
    22321 tcccttgcgc ataaggttct aactgataat gcagcccgcg taaaacacct ttactagact
    22381 tcgaatggtt atcctgaaca aattcaacct tacgtcctac agcttcttcg aaaactttct
    22441 gattaaagct ttccataaag aaaccacgct catcaccaaa aactttcggc tcgaaaatta
    22501 acacatcagg aatttctgtt ttaattacgt tcattttatt aataaccttt aatcagtttc
    22561 agcagatact gtccataagc attttttttc agcggctccg ctaatgcttt cacctgttca
    22621 gcatcaataa accctttacg gtaagcaatt tcttctgggc aggaaacctt tagtccctgg
    22681 cgctcttcaa tggtggcaat gaagttgctt gcttcaataa gactctgatg tgtccccgta
    22741 tccagccatg cataaccacg ccccatcatg gcaacggata aacgcccctg ttccatataa
    22801 atacggttaa tatcggtaat ttccagttca ccacgggcag aaggcttaag gtttttcgcc
    22861 atttcgacaa cgtcgttatc atagaaataa agcccggtta ccgcataatt actttttggt
    22921 tgtagcggtt tttcttccag gcttattgcc gtaccgtttt tatcaaactc aacgacgccg
    22981 tagcgttcag gatcattaac gtgataggca aataccgttg caccactttc tttgttaaca
    23041 gcgacatcca ttaacttcgg cagatcatga ccgtagaaga tattatcacc aagaaccaaa
    23101 gcacaatcat caccaccgat aaactcttca ccgataataa acgcctgcgc aagcccatct
    23161 ggagtcggtt gcactttgta ctgaagattt agcccccact ggctaccgtc acctagcagt
    23221 tgttgaaaac gaggagtatc ctgtggcgta ctaataatca gaatatcgcg aatacccgcc
    23281 aacatcagtg tagagagcgg gtaatagatc atcggcttat cataaatagg taatagctgt
    23341 ttactgacag ccatagtcac aggataaaga cgtgtaccag aaccacccgc taaaataata
    23401 cctttacgcg ttttcatttc atcattcctt ttaattcatc ttgctccacc atcacgaaca
    23461 agatgcaaaa actattaaat tgctgtagtc gtaattaatt cgttgagcat tcgtttcaca
    23521 ccaacctgcc agtcaggcaa gacaagcgca aagttctgct gaaatttttc tgtattaagg
    23581 cgagagttat gtggacgacg agctggtgta ggataggctg ttgttggtac tgcgttgagc
    23641 ttgttgagtg caaggggaat acctgctttg cgcgcctctt caaaaaccag cgcagcataa
    23701 tcgtgccagg ttgtggtacc actggctacc agatggtaca aacctgcgac ttccggttta
    23761 ttcagtgcca cacgaatagc atgtgccgta caatcagcca gcagctcagc acctgttggc
    23821 gcaccaaatt gatcatttat cacagccagt tcttcgcgct cttttgccag acgcaacatc
    23881 gttttggcga agttatttcc tttagctgcg tatacccagc tggtacggaa aataagatgc
    23941 ttcgcgcaat gttcctgtaa cgctttttct ccggctaact tggtttcacc gtaaacattt
    24001 agcggtgcgg ttgcatccgt ctccagccat ggcgtgtcgc catttccagg gaatacgtag
    24061 tcagttgagt aatgaattac ccaagcccca acttcattag cctcttttgc aattgattca
    24121 acactagtcg cattgagtaa ttgtgcaaat tcgggttctg actcagcctt atctactgcg
    24181 gtgtgagccg cagcattaac aataacatca ggtcgaattc ttttgactgt ttcagctaca
    24241 ccttcaggat tactaaaatc accacaataa tcagtggagt gaacatcaag agcaatcaaa
    24301 ttacccaaag gtgccagagc acgctgtagt tcccaaccta cctgccctgt tttgccgaaa
    24361 aggaggatat tcattactgg cggccctcat agttctgttc aatccacgat tgataagcac
    24421 cacttttcac attatcaacc cattttgtat tggacaggta ccattccaat gtcttccgaa
    24481 tcccgctctc aaacgtttcc tgcggtttcc agcccaattc gcggctaatc ttctctgcat
    24541 caatcgcata acggcgatcg tgtcccgggc gatcggcaac ataagtaatt tgctcgcggt
    24601 aagatttctc tttcggtaca atctcatcca gcaaatcaca aatagtgagc actacatcga
    24661 tgtttttctt ttcgttgtgt ccaccaatgt tataagtttc acccgcttta ccttcggtta
    24721 cgacggtata taacgcacgc gcatgatctt caacatacag ccagtcacga atttgatccc
    24781 ctttgccata aataggtaat gccttacctt ccagagcatt cagaataacc aatggaatca
    24841 atttttccgg gaaatgataa ggaccataat tattagagca attagtcaca atggttggta
    24901 aaccataggt acgtttccac gcgcggacta aatgatcgct ggatgctttt gaagcggaat
    24961 aagggctgct tggcgcgtaa gctgttgtct ctgtaaataa gggtaattct tctgtattat
    25021 ttacctcgtc aggatgaggc aaatcaccat agacttcgtc agtagaaata tgatgaaaac
    25081 ggaatctagt tttcttgtcg ctatcaagag cagaccaata attgcgagcg gcttccaaaa
    25141 ggacatatgt accaacaata ttggtttcaa taaatgccgc aggacctgta attgaacggt
    25201 caacatggct ttcagcagcc aggtgcatca ctgcatctgg ctgatgctga gcaaaaatcc
    25261 gtgccattgc agctgcatcg caaatatccg catgttcaaa aacatagcgt tcagaatcag
    25321 aaacatcagc aagtgattcc aggtttccgg cgtacgttaa tttatcgaca ttaacaacac
    25381 tatcctgcgt attatttata atgtgacgaa ctacagcaga accaataaat cctgcgccac
    25441 cagtaacaag tattttcacc taatttattc catattgctt cagagcatgc tgtgaaataa
    25501 gcggctctca gtttgattaa tagaagtatt aatgcacgct accgcccctg gctttacagc
    25561 taccagagca ctgcatgcat gcctacgatg tgacgagcgt tacccactcg cgctaaaccc
    25621 gaaaaattca aaagctaatt gtcttaccaa tccgctctgg aaacaaggaa aatcctggaa
    25681 aactttgact aaaatcctat tgctaactcg ttgttattct gattgtttat ataaaacaac
    25741 ggcaggaata ttcgcaacaa attactttca ccacgaatct tcactgccgt tataattttc
    25801 ttatcaaccg ttacatccgg tcagattttc attattcgct taacagcttc tcaatacctt
    25861 tacggaactt cgccccttct ttcaggttgc gcagcccata cttcacaaac gcctgcatat
    25921 agcccatttt tttaccgcag tcgtagctgt cgccggtcat cagcattgca tcaacggact
    25981 gttttttcgc cagctcggca atggcatcag tcagctgaat acgtccccat gcaccaggct
    26041 gagtacgttc aagttccggc caaatatcgg cagaaagcac atagcgacca acggccatga
    26101 tgtctgagtc cagcgtctgc ggctgatccg gtttttcgat aaattcaaca atgcggctga
    26161 ctttaccttc gcgatccagc ggttctttgg tctggatgac ggagtattca gagaggtcac
    26221 ccggcatacg ttttgccagc acctggctac ggcccgtttc attgaagcgc gcaatcatgg
    26281 cagcaaggtt gtagcgtagc gggtcggcgc tggcgtcgtc gatcacaacg tctggcagca
    26341 ccacgacaaa tggattgtca ccaatggcgg gtcgtgcaca caaaatggag tgacctaaac
    26401 ctaaaggttc gccctgacgc acgttcataa tagtcacgcc cggcgggcag atagattgca
    26461 cttccgccag tagttgacgc ttcacgcgct gctcaaggag agattctaat tcataagagg
    26521 tgtcgaagtg gttttcgacc gcgttcttgg acgcatgagt taccaggagg atttctttga
    26581 tccctgcagc cacaatctcg tcaacaatgt actgaatcat tggcttgtcg acgatcggta
    26641 gcatctcttt gggtatcgcc ttagtggcag gcaacatatg catcccaaga cccgctaccg
    26701 gtataactgc ttttaaattc gtcattattt tcctacctct aaggggctga tagtgcgtaa
    26761 attattgtca taggttagcc aaacggtatg gctatatacc aagcataact ttgattaaac
    26821 cttacgataa cactacacac catcagcatc tgggttactc ggattactcg gaaatccaca
    26881 tactgataat ttaatcagta cctctttccg aataatcgta gtccaacctg gtcctttttt
    26941 ctctgactcg tctgcattac tcagaaacaa acgttatgtc gtcttttttg gcatggacga
    27001 attcatactg cagagttcga tccagacctt gcgacagcgt atacggtgca acaaaacctg
    27061 aagaatgcac tttcgttgcg tcaaactgtg ttgttgcgca gaattttttc acgcgcacag
    27121 agctgacagc gtattttttg cccgtaattt tgctcaggat atcaaagcaa tatccaccca
    27181 gcattcctag tgggtaaggc aagtgcatag aagggatctt tttgttcagg ctttgttcaa
    27241 cttcagcaac caactggttc atgttcaggt ctggcttatc aacatagtta taaacctcat
    27301 aacctgcggc aacattcttc agtttgtact tgataaactc aacaatgttt ccaacataag
    27361 ccatggactt atagttagtc cctgcgccca ccatcataaa cttgccgcca gcgatctgtt
    27421 tcagcaagtt atagacgtta ccgcggttgc gttcaccgaa gataacggta ggacggatga
    27481 tggttaatga acgttctgtt ggtgctttgt tataccattc acgcagcact tcctctgcct
    27541 gccacttact tttgccgtag tggttgaaag ggtcgtgtgg atggttttcg tcagggttgt
    27601 gtttgttcaa accataaaca gcaacggaac tggtaaagat gatattttta acgccatttt
    27661 tttccatggc cgccagcaca ttgcgggtac cctgaacgtt gacatcataa tagagagaag
    27721 tagggctgac gtcatcgcgg tgttccgctg ccagtagtac aacagtgtca aaaccggcta
    27781 acgcctggtc gagtgcctgt tgatcacgaa catcaccaat ctgtgtgatt tctggataaa
    27841 agtggctctg ccgtttgtcc aggttcttga tattaaagtc agcaattgcc gtttcaagta
    27901 gtcgggttcc tacgaatccg gaagctccta tgagcaaaac gttattgttc ataaatcact
    27961 ttagtctggt tgttacgtaa gaaacacaag ataaagatga gtaccttccc tgagtagtca
    28021 atgctgccca gccccagctt taacagttag tgtgaggatt ataatctttt agaacattat
    28081 atccagtaag tttatgaatg gtcgcaaatc tactctctcc gttccggcaa tctaaagtta
    28141 atcttttcca cattaacaat atggtgatta atcctgtcga tgtcgacgga gctttgccct
    28201 ctttcattca tcgcatgaac atttgcaagt gacagcagtg tttctttttt cgccataaag
    28261 acaccgcgta cgtctttgcg catgtcgaag ttcatgctca atgctggtcc aactgaggat
    28321 tcctgcatca ccttgatatt acgcataaaa agatgttgcg gtttgttgtg taactccagc
    28381 gaggcacgct tcatctcaat gttagtcagt gccacaaagg agacagcatt cccggcggag
    28441 atttggatgc cgcgcaattt ataaacaaga tgggtgttat ccagttgaat attattcact
    28501 cggaaatttt gcggtatcga gagatatttg cctttaatta ccccatagcc gattaacatc
    28561 ccggcgctat taatcatttc aatattatca atcacgaaat tgtcacaacc gtaaatagca
    28621 actgtcgcgt tatcaatgcc tgctttctta ctgaaatccg gcgtgatatt gcgggctttg
    28681 atattacgga taacaaaatg tttgccattt tcaacatgga tcaactgccg acaatccgat
    28741 cccgtgatat tcgccacgac aaagtttttc actgcctggt cttccgggta gttattatcg
    28801 taggtactcc ccgcaaggcc tatgccaatt ccccagttga ttttgccatt agtacagttg
    28861 atgcgctcga tgacatggtc ggagatcaaa atatcactgt cgttaattgc cacgttccat
    28921 tcaatggcgt cgccctgtaa gtcgctgaac ttacaattgg tgatgttggc accgataatc
    28981 tggttatgaa atccctggcg taagatggcg taattagcgt ggctgacagt gaggttatcg
    29041 atggtcaggt tgctcatgac ccgtttgttt ttgccgccga tataaatctg cgttaccggg
    29101 ccaaagccgc tcatcgccag ccctttgatg gtgcagtcag aaccacgcac atccaaggtg
    29161 atgttatgca tactgccgcc ctcctcccct gtcacctggc tgccgtcctg taagacaaat
    29221 cgccctctgc cgttgccgcg caagcttcca agaatgtgta acgttttacc gggagggata
    29281 aagatgccgg tgttgatatt gtcacaaacc aatccggcag gcacgacgac cgtatgccct
    29341 tcgctgaagg cttgtttaaa tgaggcgatc cagtcgtgtg ggttgtagtc gttaatgtta
    29401 acgctttgtc gggcgggaag tgcgcgagcg aaaggggtat ggaggaaggc aagcgccgag
    29461 cttgccgtca ggaaggtgcg tcgggagagt gttttaaatg gcatgcgttc tcctctataa
    29521 agcttgcagc aagctggcga gttctcgatt gatcacctgc tggttaaaat cgtgttcgac
    29581 tttttcgcgc gcacgtttga caaccggagc cagttcgtcg gtgcccagtt ggctaaacgc
    29641 cgccagtcgt tgcgccagtg cgcgagcatc gttctcaggc accagccagc cggatttgtc
    29701 agcctccacc agttccggta ttccgctatg cagagtagaa accaccggaa taccgaccgc
    29761 catcgcttcc attagcgcca ccggaatgcc ttccatatca ccatccgcgc ccgttaccga
    29821 tggcaacaga aagacatccg cgtcgtcgag catcgctttc acttcgtggc tcggtttaaa
    29881 gcccggcatc tctaccacat cttccagttg atattgttcg atgagggtac gcaggcgtcg
    29941 ttcccacggg ccaatgccga ggatgcgata gcgaaatgcc acgccctgct ctttcaactg
    30001 acggcaggct tcaatcgcca catgcaggcc ttttttctcg gttaagcgtg cgacggaaat
    30061 gatttccagc ggcgttgcgg gcgctttcac cggacgcggg ctaaagcgcg tcatgtccac
    30121 gcccatacgc gatacggcga ttttttccct cgggcagccc attttttgca gccttccggc
    30181 ccacaaatcg cttatcggta acatcaggtc gccacggcga aacagttgtt gatattcggg
    30241 agtgtaatgg ttgagcactt cccgactgga aatatcaatg ccgtggaaaa tggtggcaat
    30301 tttgccgcga atgacaccca gttcccgtag ttttgctgcg gttacccccg ccgggccaaa
    30361 atgagcgatg aacacatcgg catgaagcgg tgttgcgacc tggccgcaaa tggcagacaa
    30421 aatcaggttc cgcgactcgg caccatagcg tttgaggttg agcgcctgcc aggtattttt
    30481 acgataaatg ccgcgtaacg tctggctggc gcggtggcgc agtttcgcta ttttgcccgt
    30541 aagttcgtcc tgtaaccagt gggttctggc ggcaaggttg tatttcgtcc atgccgcgtg
    30601 ggtgttttgt gtgtcgcctt tttgcagcgc gagaatctct acctcaaatc ccatatcaat
    30661 aaacgcggta atttggttaa ggacgaaggt ttctgacgac agcgggaatt tcagtaaaaa
    30721 gaagccgacc ttcatttcac ctccccgatg cgctcaagca cagactgcac catctgcatt
    30781 cctgtctgac gctcacgact gacggcttca ctaagtcgcg cattcagtgc cggaagctgg
    30841 cctaaggtat ccgcaaccat cgcttgcagg ctgccgtcta ataaatgacg gatatcaatt
    30901 gccatctccg gtagtcccag ctgctgcata atcccggcgg atttatgttc gtagttgatg
    30961 gcaattgccg gagtggcaaa attcatcgag ataatggcag agtgcaggcg cgtaccgacg
    31021 gtgagttcac aggcaccgag aattttgccc atttccagat cgttgagttc atccatcacc
    31081 acatggtaac gggcaggatc gctgatgtgc tggcgaagat tgagcgccat catgcggtcg
    31141 tctttgttat agctgtcgat acccgtacag gtggagagtg caatgacctg atagccttcg
    31201 tcgagaatgc gattgaccac cccggcaaag gctttttcat acgcttgttg agtggtgccg
    31261 aggcgtttgt caaacggtgc cagttcgcgc agggtaattg ctaccgtttt ctgttgtgcg
    31321 gcaacgtcca gccagtgttg aacagcatag ctggcggtga agtcttcggt gtggtgatcg
    31381 accagccacg cggtatcgac gccatgttcc acttttgcgg tagtgatatt gctgcgtttc
    31441 atcagatcaa gactgaccga ttcgcgcagg atcagcgcgt cacagtgacc aaaaacgtag
    31501 ttcgccagtt ggttaaattg ctcatcctgg aaggggccga cgctgtgacc aatcataaac
    31561 agcggctttt tcgccataaa cgtgcaaagc gcatgttcaa actgcggcac gccgtagaga
    31621 tcgacaaaaa acgatcctcc gacctgaata atggcgtcgt aacctgagag caggcgcacg
    31681 aagtcggtga atccctgggc gatggcgata ttacgcagct tgccagtgtc ggtgacgcgt
    31741 gagagcaata cctggtgttg atagcggcga cggaggactt ttttaacgcg cccgacaacg
    31801 cccgccgcgc tgttgtgttg tttcatttgc aggaacagag gatcgcccat taccgggcgg
    31861 ttgagtagcc aggaagaact gaccggatag cggctcatca cgtccacttc ggcttgtgga
    31921 ttgaggatgt tgatggcatc aagtaagccg cgcaagatgg cgctgtcgcc acgattgccg
    31981 caagtgtggt tgcccagaat aagtaatttc attttttcct cataaatttg atgccaagtg
    32041 aggctgtgtt tgttttgttc gttgccgctt tttgcctgat gcgacgctga cgcgtcttat
    32101 caggcctaca agacccgagc acagaaccgt aggccggata aggcgttcac gccgcatccg
    32161 gcattcagtg cctgatgcga cgctgacgcg tcttatcagg cctacaggtc ccgagcacag
    32221 aaccgtagga tggataaggc gttttacgcc gcatccggca accgttgtcg gaaccgaaaa
    32281 cagcaactca ccccgcccgt aaaagcattt tcattttttc gctgcgacaa aactgacgct
    32341 tcacttccac caccagcgga tggcgcgaca gcacaatcat caccacaaac gccagcacgc
    32401 ccgcggctat ttgcaccgcc agcagcatcc ccagcgccag ttgccctttc agcacaatgc
    32461 ccagcgcata actgaccacc agcgtcggca acgagagata aaacggcagc cacaaactca
    32521 ggatgtactg gcgataactg gaaccaagaa ccggtttaat catcacgaag taactcagaa
    32581 tggtgttgat aatctgcacc agcaggaaac cgagcgtgac gccgattgcg cccgccatct
    32641 gcccaccaat aacaatcgcc ggaataaaca gaaatgtttt gaatacgttg aatttaaagc
    32701 tgatatcgac ccgcgctttc gccatcagca gcgaaccaat cgggttaccc acggagcgca
    32761 gtagccccac cacacacaga aattgcagca ccggaataat gctgttccac ttctcaccaa
    32821 agaccagtgg tacaaagtta ttcgacacca ccattagccc gagcagcgcc ggaaagttga
    32881 taatccccac caccgacagc ggtttgtaga agttaatacg cagcttttcg gtgtcgtcct
    32941 gaattttggc aaacgccgga aacaacacac gggtgatgat tgggttcagc ttcatcggcg
    33001 gcacaacggc cacgttgtaa gccaggttgt agccccctgc cacgcccgcg ccgagaatac
    33061 gcgccagcac cagcgttgaa aggttggtat tgagatagtt gatgatgctg tccgccgtca
    33121 gccaggcacc aaagcgtaag ttcggtgcca ccgacgccag cgagaaatgc agaccggggc
    33181 gataaatttt gcggccaaag tagccaaaca gcagcgttct caccgcacta ttgaccagat
    33241 aaccgaggat cgcggtcatc gccagcggcc agaaatgggc gctaaccacc gtaaaagtga
    33301 agcccgccag taccgcgctg gtttcgatca tgccgatttt gttgaactcc agctcctttt
    33361 gcatcaacgc gcggaactgc tgcccctggg ggatcaccac aaacgccagc gacaatgttt
    33421 taatcaacgg tgccaggtcc gggttattca gcacgtcgcc gatgagatca ctcaacaaaa
    33481 acaccgccag acacaccaca agccccagcc cgacgttcag ccagtacagc gtggtgagtt
    33541 caaggtggct gatttctttt cgctgaataa tcgagttagc gataccgaag tcagaaagcg
    33601 tatctgccag cgcgatgatc accagcgaca cagtaagcaa accgaactgg tggttgtcga
    33661 taatccgcgc cagcacggtc atctgcacca gcccgaggcc gatgatgatc accgtggcaa
    33721 tcgccgacca cttcgcgccg ctgatggttt tttcacgtaa gctcatatca atatgccgct
    33781 ttgttaacga aacctttgaa caccgtcagg aaaacgattt tgatatcgaa ccagacgctc
    33841 cattcacgga tgtactcaag gtcgaactcg acgcgttttt ccattttctc cagcgtgtcg
    33901 gtttcgccgc gccagccgtt aatctgcgcc cagccggtaa tgcacggttt cactttatgg
    33961 cgcagcatgt agccttcaat gagctggcga tactgttcgt tatgcgctac tgcgtgcgga
    34021 cgtggaccga caatcgacat ccccccggtc agcacattga taaactgcgg taattcatcc
    34081 agcgaggtgc ggcgcagaaa gttccccact ttagtgacgc gcggatcgtt ctgcgtcgcc
    34141 tgggtcacca ctttgtcgtt ctccatcact ttcatggaac ggaacttcca cactttgatc
    34201 ggcttgccat ccatgccgta gcgagtctgg cggaaaataa ccggccctgg tgaactgagt
    34261 ttcaccgcca gcgcaataca gcacagcacc ggggagatca gcagcaagat cagcgtcgcc
    34321 agcacaatgt cttccgcacg ttttagcagg cggttaaccc cggaaagcgg cgtgtcatac
    34381 agcggcacca ccggaacgcc gttcatctct tcgagacgtg aatggagaat attgaaggta
    34441 aagacatcgg ggatcagcag caccgaacag gtggtgtccg ccagttgatg gaccagtttt
    34501 ttcactcgcg cgccgtcgca catttgcatc gcgatataga cgttatgaat cttacccgct
    34561 ttagcatcct cgaccagctg ttgcagattg cccgcccagt cgttagaaac accgcccggt
    34621 ttcgggtcgt ggtaaacgcc caccacttca aaccctaacc acggctgatt acggaagctc
    34681 tccatcagca tttgtccggc ggctaaatcc cccgccaccg cgaccatgcg cttgttatag
    34741 ccatgattac gcagccagcc cgccccaatg cgaatacatg aacggcaaac caccagtccg
    34801 atactggtca gcccatacca cgccagccag attttcagtt gcgtgtcgaa atcattgttg
    34861 aacgccacca gtccggcgct gaaaatcacg cttaaggtcc agttttgtag caacagggca
    34921 aattctgtcg ctgcccgaac accgcgccat gagcgataaa aatcggtgat gccgcccagc
    34981 atctggaaca ccaccagcgt aatcaacgcc accaacaggt gcatgtagag gaatgacagt
    35041 ccgctcactt cgcaaaccag ccatagtccg gcaaacatga tggtgatatc tgaaaagcgt
    35101 tgcaccatag agattaacga tgcattggtt ttcgctcgcg cttttttaga tttgtcatcg
    35161 ttgttcctgt tattagcccc ttacccgcag tggggtaagg gaagatccga cattactcgt
    35221 tcagcaacgt cagcagagtt cgcgttcgcg cttccatcag cggcacatca ccgcgtgatt
    35281 ccacattcaa ccgcaccacc ggttcggtgt tggaggagcg cagattaaag cgccagtcgg
    35341 caaaggtcat gctgatgcca tcggtgcgat ccaccgccag cgcatcacgg ctaaaatgct
    35401 gttccacgcg gttaatcgcc tcaacgggtt gcgccagttt gctgttgatc tcaccgcttg
    35461 ccggaaacgc cgccatccgg tcgcgcacca gttcgcccag cgtttttcct ttcaggcaca
    35521 ccagttcggc gaccagcagc cacgggatca tgccgctgtc gcagtaagcg aaatcacgga
    35581 agtaatggtg ggcgctcatt tcgccaccgt agatggcgtc ttccttgcgc atacgttctt
    35641 taataaaggc gtgtccggtt ttcgacatca ccgacgtgcc gccagcggca gtcaccacat
    35701 caacggtatt ccaggagaga cgtggatcgt ggatgatctt cgcgccggga tttttttcga
    35761 ggaacgcttc tgccagcagg ccgacaatgt agtagccttc gataaactgc cctttttcgt
    35821 caaacaggaa gcagcggtca aaatcgccat caaaggcaat gcccatatcc gcgccgtgtt
    35881 tgatgaccgc attgcgggtg tcgtcgcggc attccggcag tagcgggtta ggaataccgt
    35941 tggggaaatt gccgtccggc gtgttgtgca ctttgattaa ttccacgggt gcgccaaggg
    36001 ctttaaagcg ggcttcaatg gcgtccacca ccggacccgc tgcgccattc ccggagttaa
    36061 tcaccagctt gagcggcgtg aggtttttga cattgatata accgaacagg tgatcaacgt
    36121 aagcgtcacg caggttgatt tgctgatagc gaccgcgttt ggtttcatcg acgggaggaa
    36181 agtcgttggc ttcagccaga cgctggacgt cgcgcagtcc ggtatcaccg ctgatcgggc
    36241 gagccccttc gcgcaccagc ttcatgccgt tataatccat cggattatgg ctggcggtga
    36301 cttcaatgcc gccatccacg ccgagatgga acgtggcgaa atagatctct tcggtgccgg
    36361 acataccgat atccagcacg tcaacgcccg catcctgtaa accttttgcc agcgccagtt
    36421 ttaaggtttc gctggtgaga cggacatcac cgcctaacac aatggttttc ggtttgagaa
    36481 attcgccata ggcgcgacca atgcgccagg cgatatcttc attcagttct tcgcctaatt
    36541 tcccgcgaat atcataggct ttaaagcagg ttaatttttt catgtcgtta ccctttttca
    36601 ggcaatagtt ggccctgacc gaaacgacca attttgtttt tgtcgttatt tacatctcgg
    36661 tttcgcattc attgcctgat gcgacgctgc cgcgtcttat caggactaca aacccgaacc
    36721 gtaggtcgga taaggcgttc acgccgcatc cgacaaacag cgcctgatgc gacgtttaca
    36781 cccgtccgta gcgatccgcg aagcgcacca catcatcctc ttcgagataa gagccggagc
    36841 gcacttcaat taaatcaagc ggaattttcc ccggattttc caggcagtgc gtcgccccca
    36901 gcggaatata aatggactcg ttttcaccaa gcagtttgat atcaccatca atggtgactt
    36961 ttgccgttcc cgcgaccact acccagtgtt ccgcgcggtg atggtgcatc tgtaccgaca
    37021 aaccctcgcc cggtttcacg gtgatgcgtt tcacctggta gcggtcgccc gcgtcgatag
    37081 agtcatattt gccccacgga cgatacactt cgcgatgcac ccgatgctca tggcgaccat
    37141 cggctttgat ctgctcgacc acttttttca catcctgtac cgcgttacgg tcggcaatca
    37201 gcaccgcatc tttggtctgc accactacca gatctttcac cccgacggtg gtgaccaggc
    37261 cagattcggc atacacatag ctgttttcag ttttgtgatt aatcacatcg ccgtggcaaa
    37321 cgttgccctc ggcggtgtgg gcgctgatct cccataatga agaccaggaa ccaacatcgc
    37381 tccagcccgc atccatcggc accacaacag catctgccgt acgttccatg accgcgtaat
    37441 ccaccgactc ttccgggcag gcgagaaacg cttcttcatc cacacgaata aaatcaagat
    37501 ccggatcgac ggagctcatc gctttttcac aggcatcgag aatatccggg cgatattttt
    37561 tcagttcttc gagatagcgt ccggcgcgga acaggaacat gccgctgttc cagtaatatt
    37621 cgccgcttgc cacataggcc tgggcggttt ccagattcgg tttttcgaca aactgcgcca
    37681 cttcaaaggc caccgtatcc tgctcacccg cagacacttc accgcgacga atatagccat
    37741 aaccggtttc tggtagatcc ggcacaatgc caaaggtcac cagcttgccc gcttcggcat
    37801 atggcatggc attacgcacg gcggcacgga acgcgtcttc atcggcaatt acatgatccg
    37861 ccgccagcac cagcattaac gggtcgttct ccgggctatg acgttttgcc gccagcgccg
    37921 ccagcgcaat ggccggtgca gtgttacgcc ctgcaggttc gagaataatg ttctcggtga
    37981 gtttgttcag ttgacgcagc tgttccgcga caataaagcg gtgctgctca ttgcaaatca
    38041 ccaccgggct ttcgcactcc acgccgttca ggcggcagat ggtggtttgc agcatggtga
    38101 gatcgccttt caggcataaa aactgcttgg ggtaaagtac gcgggaaagc ggccataagc
    38161 ggctaccgga gccacctgcc atcacaactg gatagagttt cgactgcgcc ataattatcc
    38221 ccgaatatca tttataaatt gacgtaacac gttctcttta tcgagcgtgc gttcggcata
    38281 ttcacgtgcc accgtgttgt gtttgggcag caggagcgcc tgactaatcc ccgccaccag
    38341 cgcctcgacc gattccggct ctacgcaaac cgcaatgccc ggaaaggttt cgcaaagctg
    38401 ccccagttct gtgtgggctt ctgcggtaat caccgcgtta ccgcctaccg ccagaatatt
    38461 ggtcagtttc gacggcaata cggcatctgc cgcgccgcat ttttgcacca ccagatggca
    38521 atcgcccatc ttcagcagtg cgggtaaagc gtcatacgat tgcagcggga aaaattgcat
    38581 gttgcgcagt ccacgctgct gcgccatttt ttccagccgc gctttgccgc cgccctgccc
    38641 gacaatggca aaaatcagcg gttcatcgcg caggcgatcg gcagcttcaa taacgttttc
    38701 cagtccctgc ttttcaccaa tattgccgga gtaaagaatg atttttttgt tatccggtag
    38761 gccaagctgg ttacgaaggg catcaacatc ggcgtctgca acatgctgaa aacgggcgat
    38821 ttccgaccag ttggggaaga aaatgatgtt atccgccgcc acgccttttt cgatggcttt
    38881 attcatcatc gaacgcgaaa tcgtggagac gttatcgacg ttatgcagtc cgctacgttc
    38941 gaacgccgtt gccagctgtg ccactttgcc gcctttgcct tttccggcaa ggcccagccc
    39001 cagcatggcg tccacttcgt aatcctgaat atgcagcacg gtacgcgcac cagagagttt
    39061 cgccagcagg cgcattcccg gcgtgcaaaa cagcgttggc accacgccga taatgcgatc
    39121 cggcttccag cgacgttgcg ccatcaacgg gaaaaaactg ctgacggcaa aaccgccgag
    39181 atgcaacagg cgtttcaggg tgctcggctg ttttggcacg tacagcgggc agcgccacac
    39241 cgtggcggcc ccctcttctc gtttgtagcg ctaggcggaa tagttctcgc ccacctgcca
    39301 ctgcgggtag taaggcggtg cggtaataac ccgcacctca tgaccttgcg ccgccagcca
    39361 ttccaccatt tctccggtgt atttgccgat gccggttaac tccggcgagt agttaatgcc
    39421 gtagaccagt attttcataa tccgggtact ccggcacgct tctcagcgag aaaataggcg
    39481 cggctgttag cgtgaacatt gtcactggcg agcagtgcgt ccggcgtcag ccagcggtaa
    39541 tcgtcatgct gctcatccgg cagtaacagt tcttcttccg ctactctgaa gcgaaaaccg
    39601 agcaccacat agtgagtggt gaaatccgtg ccagagaagt tatcgtcata aaagtgctgc
    39661 cagacaccgt aaaactggcc tgctgttatc ggcagacgca gccccagttc cgccatcgtc
    39721 agccgctcaa atgcggcttc cagcgtttcg tctttctgca cgcgccctcc cggcacaaac
    39781 cagtaaccct gcgccgggcg gttggttctt ttgccaggca gaaactcgcc gcgactgttc
    39841 tcgacaataa agtcgagaga gacaagcggt gtggagcgca ctaccgtggc aaagtcttcc
    39901 tgacgtaaaa acatcattac ccccgaaagc ggtcttgatt ctcaaggaac cactggtaag
    39961 tgctggcaag ccccgcttcc agtgagattt cgtgatacca gccaagctga tgcaggcgcg
    40021 tcacatcaag cagtttgcgc ggcgtaccat ccggtttact ggcatcaaaa accacccgac
    40081 ctttgtaacc caccactttg gcgatggttt gcgccagctc gcggatagtg cagtcaacgc
    40141 ccgtgccgac gttaatgtgc gacagcatcg gctgggtgtt ttccagccag acttcgtgcg
    40201 ccagctccat cacatgaatg ctcgccgccg ccatatcatc gacgtgcagg aattcacgca
    40261 tcggtgtacc gctgccccac accaccacgt ccggcgcatt ctgtgccgtc gcctcgtgga
    40321 agcgacgcag caatgctggg atcacatgcg aattactcgg gtggaagttg tcatgcgggc
    40381 catacaggtt ggtcggcatg accgagcggt aatctcgtcc gtactggcga ttgtaagatt
    40441 cgcacagttt gatcccggcg attttggcaa tggcgtaagg ctcgttggtc ggctccagcg
    40501 tgctctgcaa taactcgctt tctgccatcg gctgttttgc cagtttcggg tagatgcagg
    40561 acgatccgag aaacagcagt ttgttcacgt cgttctgatg cgcggcgtga atgatgttgc
    40621 tctcaatcat catgttctgg tagatgaaat ccgccggata ggtgttgttg gcaacaatgc
    40681 cgcccacttt cgccgccgcc agatagacct ggtcaatgcg ttcgctggca aagaaatcat
    40741 gcacggcgcg gctgtccagc aggttcagct cgtcgcgggt acgtaatacc agctccacat
    40801 caccgcgctg ttcgagctgc cgcttgatgg cagaaccgac catcccacga tggccagcga
    40861 taaaaatgcg ttgtttactc atgcttatga ctccagcgcg atcgccacgt cgtagccgtg
    40921 agatttcagc agagagtgtt ttttcgccgc ttcgaggtca ttagccacca tttcagacac
    40981 catctctctg agggtgattt ccggtttcca gcccagtttt tcgtgcgctt tggtcgggtc
    41041 gtcgagcagc gtttcaactt ctgccggacg gaagtaacgc ggatcaacgg cgataatcac
    41101 atcacccggt ttaacgcccg gcgcgtcatg cccggtgacg gaaaccacaa tgcccttctc
    41161 ttcaacaccc gtgccttcaa agcgcagttt gatgcccagc tgtgccgctg ccatttccac
    41221 gaactgacgt acggagtact gaacgccggt cacgataacg aaatcttccg gctgttcctg
    41281 ttgcagcatc atccactgca tttttacgta gtctttggcg tggccccagt cacgcaggga
    41341 atccatattg ccgaggtaca ggcacgactc cagcccctgg gcgatgttgg cgattgcgcg
    41401 ggtgattttg cgggtaacga aggtttcgcc gcggcgcggg gattcatggt tgaagagaat
    41461 accgttacaa gcgtacatgc cgtaggattc gcagtagtta acggtgatcc agtaggcgta
    41521 cagtttggcg accgcatacg gagatcgcgg gtagaacggc gtggtttctt tctgcggaat
    41581 ttcctgcacc agaccataca gttcagaggt ggaagcctga tagaaacgag ttttcttttc
    41641 cagaccgagg aagcggatcg cctccagcag gcgcagcgta cccatcgcgt cgacgtcagc
    41701 ggtatattct ggtgactcaa aagagaccgc aacgtggctc attgcgccca ggttgtacac
    41761 ttcatccggc tgtacttcac gcaaaatgcg cgtcaggtta gaggtatcac tcaggtcgcc
    41821 ataatgcaga tggaatttcg ggttgcaggt gtgcggatcc tgataaatgt gatccacgcg
    41881 ctcggtgttg aatgacgatg cgcgacgctt aataccatgc acctcgtaac ctttttccag
    41941 cagaaactct gccaggtaag aaccgtcttg tccggttaca ccggtgatga gagcgacttt
    42001 tgacatgtct tattcctctg tatttttgaa tttattcagt ttcaacgcgt tcgcgtatca
    42061 ccactgcggg attcccccgg caaaccacat ttaccggaag cgatttaaaa acactgcttc
    42121 gtgcacccac gacggtgccg tcgccgattg tgacgcctgg ggcaacaaag acatcggttg
    42181 ccagccagca tttctcgcca atcacaatag gcg
//
LOCUS       DADKRT010000009        40429 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.009, whole genome shotgun sequence.
ACCESSION   DADKRT010000009 DADKRT010000000
VERSION     DADKRT010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 40429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40429
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.009"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(115..2436)
                     /locus_tag="JQ356_000441"
     CDS             complement(115..2436)
                     /locus_tag="JQ356_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HAY4620633.1"
                     /translation="MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFITRYRKEI
                     TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
                     PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
                     ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
                     NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
     gene            complement(2533..3045)
                     /gene="greB"
                     /locus_tag="JQ356_000442"
     CDS             complement(2533..3045)
                     /gene="greB"
                     /locus_tag="JQ356_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709179.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HAY4620634.1"
                     /translation="MRIIKQTKGINEMKTPLVTREGYEKLKQELNYLWREERPEVTKK
                     VTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAW
                     VEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASW
                     YVNAIEYVKP"
     gene            3237..3956
                     /gene="ompR"
                     /locus_tag="JQ356_000443"
     CDS             3237..3956
                     /gene="ompR"
                     /locus_tag="JQ356_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018150685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HAY4620635.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            3953..5305
                     /gene="envZ"
                     /locus_tag="JQ356_000444"
     CDS             3953..5305
                     /gene="envZ"
                     /locus_tag="JQ356_000444"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HAY4620636.1"
                     /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
                     LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
                     GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
                     "
     gene            complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="JQ356_000445"
     CDS             complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="JQ356_000445"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HAY4620637.1"
                     /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
                     ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
                     QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
                     AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
                     MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
                     GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
                     SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
                     GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
                     SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
                     KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
     gene            7382..9106
                     /locus_tag="JQ356_000446"
     CDS             7382..9106
                     /locus_tag="JQ356_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HAY4620638.1"
                     /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
                     PATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWD
                     FGCYLLLMAMLLLPWIQQSLRIRNCSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
                     LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
                     TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
                     PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGY
                     FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
                     TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKV
                     LAENVLIAPGSVKPDVTFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
                     NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRDLTVDGE
                     TLEINLSK"
     gene            complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="JQ356_000447"
     CDS             complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="JQ356_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HAY4620639.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
                     LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
                     DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
                     VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
                     TVYDPQDVEFKCTCSREHCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="JQ356_000448"
     CDS             complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="JQ356_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HAY4620640.1"
                     /translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMAR
                     KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
     gene            complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="JQ356_000449"
     CDS             complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="JQ356_000449"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HAY4620641.1"
                     /translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG
                     VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
                     EALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
                     ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI
                     PSLM"
     gene            complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="JQ356_000450"
     CDS             complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="JQ356_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HAY4620642.1"
                     /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRK
                     LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
                     GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
                     CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
                     QINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDCHVVRQGRYLSLHDEVKNFPL
                     QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
                     GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL
                     TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
                     NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
                     AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA
                     EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
                     HRTRMMEIQAYYESCLNPQLITPSESLIE"
     gene            13744..14304
                     /gene="nudE"
                     /locus_tag="JQ356_000451"
     CDS             13744..14304
                     /gene="nudE"
                     /locus_tag="JQ356_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HAY4620643.1"
                     /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
                     TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
                     GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
                     DPDFNEARNVSALFLVREWLKGQGRV"
     gene            complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="JQ356_000452"
     CDS             complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="JQ356_000452"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312265.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HAY4620644.1"
                     /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
                     KITDTLKALPTYGPLLPAAVTSANPQGATAMLADGSTVALSMEGVRWARPYRSDTQQG
                     PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
                     QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
     gene            17141..17920
                     /gene="hofM"
                     /locus_tag="JQ356_000453"
     CDS             17141..17920
                     /gene="hofM"
                     /locus_tag="JQ356_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
                     /protein_id="HAY4620645.1"
                     /translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII
                     KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL
                     SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
                     ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALFVDPDS
                     VAICGEGGFDPWEAVSVRQPLLPPPGGDFAIALGLALGKAY"
     gene            17920..18459
                     /locus_tag="JQ356_000454"
     CDS             17920..18459
                     /locus_tag="JQ356_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HAY4620646.1"
                     /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
                     SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLRKQRSQRQRQRQFTRDWQSALEAL
                     AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
                     GRWQFEYQLTRKVSDEHVL"
     gene            18443..18883
                     /gene="hofO"
                     /locus_tag="JQ356_000455"
     CDS             18443..18883
                     /gene="hofO"
                     /locus_tag="JQ356_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofO"
                     /protein_id="HAY4620647.1"
                     /translation="MNMFFDWWFATSPRLRQFCWAFWLLMLVTLIFLSSTHHEERDAL
                     IRLRASHHQQWATLYRLVDTTPFSEEKTLPFSPLDFQLPGAQLVSWHPSAQGGELALK
                     TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
     gene            18873..19277
                     /gene="hofP"
                     /locus_tag="JQ356_000456"
     CDS             18873..19277
                     /gene="hofP"
                     /locus_tag="JQ356_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofP"
                     /protein_id="HAY4620648.1"
                     /translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV
                     GRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQ
                     GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
     gene            19189..20427
                     /gene="hofQ"
                     /locus_tag="JQ356_000457"
     CDS             19189..20427
                     /gene="hofQ"
                     /locus_tag="JQ356_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HAY4620649.1"
                     /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
                     KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA
                     RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
                     KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
                     LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGIEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
                     KEYERRELVVFITPRLVSSE"
     gene            20828..21349
                     /gene="aroK"
                     /locus_tag="JQ356_000458"
     CDS             20828..21349
                     /gene="aroK"
                     /locus_tag="JQ356_000458"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HAY4620650.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            21406..22494
                     /gene="aroB"
                     /locus_tag="JQ356_000459"
     CDS             21406..22494
                     /gene="aroB"
                     /locus_tag="JQ356_000459"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HAY4620651.1"
                     /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
                     LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
                     GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
                     RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLIL
                     PLAIGKSEVRSGVSHELVLNAIADCQSA"
     gene            22586..23872
                     /gene="damX"
                     /locus_tag="JQ356_000460"
     CDS             22586..23872
                     /gene="damX"
                     /locus_tag="JQ356_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HAY4620652.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
                     ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ
                     YMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGDKSIDLAGNATDQANGVQPAPG
                     TTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVA
                     VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEP
                     KPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA
                     GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV
                     YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
     gene            23979..24815
                     /gene="dam"
                     /locus_tag="JQ356_000461"
     CDS             23979..24815
                     /gene="dam"
                     /locus_tag="JQ356_000461"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY4620653.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
                     RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
                     KK"
     gene            24833..25510
                     /gene="rpe"
                     /locus_tag="JQ356_000462"
     CDS             24833..25510
                     /gene="rpe"
                     /locus_tag="JQ356_000462"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HAY4620654.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
                     LAKVSHE"
     gene            25503..26261
                     /gene="gph"
                     /locus_tag="JQ356_000463"
     CDS             25503..26261
                     /gene="gph"
                     /locus_tag="JQ356_000463"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HAY4620655.1"
                     /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
                     RVITWIGNGADVLMERALAWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
                     SEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
                     DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
     gene            26254..27258
                     /gene="trpS"
                     /locus_tag="JQ356_000464"
     CDS             26254..27258
                     /gene="trpS"
                     /locus_tag="JQ356_000464"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HAY4620656.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
                     "
     gene            27527..28432
                     /locus_tag="JQ356_000465"
     CDS             27527..28432
                     /locus_tag="JQ356_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709156.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620657.1"
                     /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
                     LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
                     LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE
                     LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESL
                     QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
                     RAVVDKHALLAHQQRVVSGEQEPSY"
     gene            28449..28811
                     /locus_tag="JQ356_000466"
     CDS             28449..28811
                     /locus_tag="JQ356_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417841.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HAY4620658.1"
                     /translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM
                     AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE
                     GYLLANLYGLWMAANEEV"
     gene            28895..30058
                     /locus_tag="JQ356_000467"
     CDS             28895..30058
                     /locus_tag="JQ356_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfX family PLP-dependent enzyme"
                     /protein_id="HAY4620659.1"
                     /translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKR
                     LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQ
                     GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLY
                     PGQESGFVQHSLHEVVAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQAR
                     DQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQSERIA
                     MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
                     SLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPKIVGRYDSLGNSLGA"
     gene            30058..31284
                     /locus_tag="JQ356_000468"
     CDS             30058..31284
                     /locus_tag="JQ356_000468"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY4620660.1"
                     /translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
                     LPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
                     PFCDVIDRVEQALVSAGWQVERRGDELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
                     ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYD
                     NGFQVVHMGYGVDKKVQVPQKLYEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMD
                     ITLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVDAMQPDDCLV
                     VMADHGNDPTIGHSHHTREVVPLLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQ
                     NGRSFLSSLRFAGDTL"
     gene            31281..32159
                     /locus_tag="JQ356_000469"
     CDS             31281..32159
                     /locus_tag="JQ356_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase-related protein"
                     /protein_id="HAY4620661.1"
                     /translation="MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
                     TRGVRNVIEMTNRYMGRNAQFMLGVMRETGINVVACTGYYQDAFFPEHVVTRSVQELA
                     QEMVDEIEQGIDGTELKAGLIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTS
                     FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
                     DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
                     ADVDVMLRETPSQFFQ"
     gene            32170..32523
                     /locus_tag="JQ356_000470"
     CDS             32170..32523
                     /locus_tag="JQ356_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2620 domain-containing protein"
                     /protein_id="HAY4620662.1"
                     /translation="MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQ
                     LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
                     EHVEHAIPMLINHLK"
     gene            32535..33839
                     /locus_tag="JQ356_000471"
     CDS             32535..33839
                     /locus_tag="JQ356_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620663.1"
                     /translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
                     NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
                     IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLV
                     AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
                     EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
                     QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
                     EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
                     AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
     gene            33851..34936
                     /locus_tag="JQ356_000472"
     CDS             33851..34936
                     /locus_tag="JQ356_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HAY4620664.1"
                     /translation="MKTFPLQSLTLIEAQQKQFALVDTICRHFPGAEFLTSGDLGLTP
                     GLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP
                     TTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
                     RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRA
                     TLYSGGSQIQGAQALEVLRCLVFAPVMHAVQAGVSERLLALLNGGEVPEVKSAVIANA
                     QSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSE
                     HCAIRINPNRSGEETVLRILRESIASI"
     gene            complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="JQ356_000473"
     CDS             complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="JQ356_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417834.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PhoB"
                     /protein_id="HAY4620665.1"
                     /translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ
                     YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK
                     EKVIEQERVSAAPFCKKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI
                     YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN
                     DKPVHVSELFCRANRITLTIDNKRH"
     gene            complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="JQ356_000474"
     CDS             complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="JQ356_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-kinase"
                     /protein_id="HAY4620666.1"
                     /translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
                     TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
                     ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
                     DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
                     TMGAGDSFIAGFLCGWSAGMTLPQAMAQGTACAAKTIQYHGAW"
     gene            complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="JQ356_000475"
     CDS             complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="JQ356_000475"
                     /EC_number="5.1.3.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 3-epimerase"
                     /protein_id="HAY4620667.1"
                     /translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
                     KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM
                     NAGYTLISAAHAGYLTPPNVIWGRLAENLSELYEYAENIGMDLILEPLTPYESNIVCN
                     ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
                     YIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER
                     "
     gene            complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="JQ356_000476"
     CDS             complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="JQ356_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-phosphate deglycase"
                     /protein_id="HAY4620668.1"
                     /translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI
                     DRIYFVACGSPLNAAQAAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY
                     GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV
                     LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP
                     LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER
                     AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY
                     GGLVEY"
     gene            complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="JQ356_000477"
     CDS             complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="JQ356_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001324580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine/psicoselysine transporter"
                     /protein_id="HAY4620669.1"
                     /translation="MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSG
                     IFVSVGEVAKVAGTPWLTVLTFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS
                     RPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHL
                     RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGI
                     SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKL
                     ANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFF
                     KCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWC
                     RKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAF
                     WAKRSRQLNALS"
     gene            complement(40257..40424)
                     /locus_tag="JQ356_000478"
     CDS             complement(40257..40424)
                     /locus_tag="JQ356_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HAY4620670.1"
                     /translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
                     KIIGGCGPTAQ"
BASE COUNT         9348 a        10255 c        11116 g         9710 t
ORIGIN      
        1 tgtggaataa aaaggccgga gatattctcc ggcactttta tgtcaggcaa ggcgttcgtt
       61 gccagatgcg gcgtgaacgc cttatcgcgc aggtttaggg gccagtccgg gcgtttaacg
      121 ttttttgccc attgccgccg ccagcgcatc catcatcgcg ctattaccgg caggctgcgc
      181 ttcacgaccg cgtggtttgg ctgccgggcg gttgttttgc gggcgttcat taccgccgcc
      241 gcgacgggcg ttggtttcgc caggctgctc gtccagacgc atagtcaggg cgatacgttt
      301 acgctgaaga tccacttcca gcactttcac cttcacaatg tcgcccgctt tcaccacggt
      361 atgcggatct tccacaaact tgttcgacaa tgaagagatg tgaaccaggc cgtcctgatg
      421 cacgccgata tcgacaaacg cgccaaagtt ggtgacgttg gtcaccgcac cttcgaggat
      481 catacccggt tgcaggtcgt tcattgtctc gacgccatcg gcaaactgag cggttttaaa
      541 ttccggacgc ggatcgcgac ccggtttttc cagctctttg atgatgtcag ttactgtcgg
      601 cacaccgaat ttttcatcag taaagtcaga cgctttcagg ttacgcagtt cgctgctgtt
      661 acccatcaga tctttcagtg cctgctgtgt tgctgccaga atgcgttcca ccaccggata
      721 ggcttccggg tggacggtag aagcatccag cgggttatca ccgtggttaa tgcgcaagaa
      781 gcccgcgcac tgctcgaagg ctttcggccc cagacggctg actttcagca gttgctgacg
      841 gttctggaac tggccgttct catcgcgcca ggccacgatg ttttgcgcca tcatgcgcgt
      901 caggcccgcc acgcgggtta acagcggaac agaagcagtg ttgagatcga cgccaacggc
      961 gtttacgcag tcttctacta ctgcgtccag tttgcgggcc agttgcgtct ggctgacgtc
     1021 atgctgatac tgacctacgc cgatagattt cggatcgatt ttcaccagct ccgccagcgg
     1081 atcctgcaaa cggcgggcga tagacaccgc gccacgcagc gaaacgtcga gatccgggaa
     1141 ctcctgcgct gccagctcgg aagctgagta aaccgacgcg ccagcttcgc tgacgatcac
     1201 tttctgtgcg gtcactttcg ggaactgctt ctgcacgtcg agatagaaac gttcagtttc
     1261 gcgggaagct gtaccgttgc cgatcgccac cagttcaacg ttatgttttt cacacaaggc
     1321 agcaacggtc atcgctgctt ttgcggcttg tccggtgtgc gggtaaatgg tatcggtcgc
     1381 taccagtttg ccagtggcat cgaccaccgc cacttttacc ccagtacgca gacccggatc
     1441 gaggcccatc gttgcacgca gtccggcagg ggccgccatc agcagatcgt gcaggttacg
     1501 ggcaaagacg ttgattgctt catcttccgc gcgttcgcgc acggtaccca tcagttcggt
     1561 ttccagatgc atcagcacct tgatgcgcca ggtccagctc actacgcctt tgcgccagct
     1621 atccgccggg gcattgttca ggcgcaggcc aaggtgatcc atgatgattt gctcgcaata
     1681 gctctctttg ggcggctcat cgaactgcgg atcggcattc agcgaaagct ggagtacgcc
     1741 ttcgttacgc ccacggaaca tcgccagagc gcggtgagaa ggcaccgtgg acaacggttc
     1801 gtgatgatcg aaatagtcgc ggaatttcgc cccttcctct tctttaccgc tcaccaccgt
     1861 agaaaccaaa tgcgcgttct tccacagata atcacgcact ttcgccagca gcgcggcatc
     1921 ttcggcaaac cgttccatca ggatatagcg cgcgccatcc agcgcggctt tggtatctgc
     1981 cacgccttta tcggcatcaa catattgtgc agcggcgact tctggcgtgt gtgacggatc
     2041 gctccacagc aggtcagcca acggctcaag ccctgcttca atggcgattt gcccgcgggt
     2101 gcggcgttta ggtttgtagg gcaggtagag gtcttcgagt tcggttttgc ttagggtggc
     2161 gttgatggcc ttcgccagat catcggtgag tttgccttgc tcggaaatgg acttgaggat
     2221 cgcctgacgt ctctcttcca gctcgcgcag atagctcaga cgcgtttcca gattacgcag
     2281 ctgcgtgtca tccagaccgc cggtgatttc cttacgataa cgtgtgataa acggcacggt
     2341 attcccttcg tcaagcaggc gaacggcagc gtcaacctgt tccgggcgcg cctgaatttc
     2401 acccgcaata atgcggcaga acgaatcatt catcatggtt tgagttcatc ttttcggatc
     2461 aaaaatcagg ggatagttat acggactggc tggcaaaaat gccagccatc ggcaggaggt
     2521 taagactctt ccttacggtt tcacgtactc gatagcatta acataccagc tcgcttcccc
     2581 ggcaggggta ttcaccaccg ccagatcgcc gacttctttt ttcagcaatg cgcgggccat
     2641 cggggaatcg atagagatgt aatctttacg gccaaaaatt tcatcgtagc cgacaatacg
     2701 gaaacggtga gtcacgccat cgtcgttttc aatctccacc cacgcgccaa aaaagacttt
     2761 gccttcctgc tgaggggagt aatcgacgat tttgagattt tccatgcatt tagtgagata
     2821 gcgcacgcga cggtcgattt cacgcagacg ctttttatta tactgatagt cagcattttc
     2881 gctgcggtcg cccagacttg cggcccaggt cacctttttt gtgacctccg ggcgttcttc
     2941 acgccagaga taattaagct cttgtttgag tttttcatac ccttcccggg taaccagggg
     3001 cgttttcatc tcgttgattc cctttgtctg tttgataatg cgcacattgg gtataacgtg
     3061 atcatatcaa cagaatcaat aatgtttcgc cgaataaatt gtatacttaa gctgctgttt
     3121 aatatgcttt gtaacaattt aggctgaaat tcataccaga tttagctggt gacgaacgtg
     3181 agctttttta agaatacacg cttacaaatt gttgcgaacc tttgggagta caaacaatgc
     3241 aagagaacta caagattctg gtggtcgatg acgacatgcg cctgcgtgcg ctgctggaac
     3301 gttatctcac cgaacaaggc ttccaggttc gaagcgtcgc taatgcagaa cagatggatc
     3361 gcctgctgac tcgtgaatct ttccatctta tggtactgga tttaatgtta cctggtgaag
     3421 atggcttgtc gatttgccga cgtcttcgta gtcagagcaa cccgatgccg atcattatgg
     3481 tgacggcgaa aggggaagaa gtggaccgta tcgtaggcct ggagattggc gctgacgact
     3541 acattccaaa accgtttaac ccgcgtgaac tgctggcccg tattcgtgcg gtgctgcgtc
     3601 gtcaggcgaa cgaactgcca ggcgcaccgt cacaggaaga ggcggtaatt gctttcggta
     3661 agttcaaact taacctcggt acgcgcgaaa tgttccgcga agatgagccg atgccgctca
     3721 ccagcggtga gtttgcggta ctgaaggcac tggtcagcca tccgcgtgag ccgctctccc
     3781 gcgataagct gatgaacctt gcccgtggtc gtgaatattc cgcaatggaa cgctccatcg
     3841 acgtgcagat ttcgcgtctg cgccgcatgg tagaagaaga tccagcgcat ccgcgttaca
     3901 ttcagaccgt ttggggcctg ggctacgtct ttgtaccgga cggctctaaa gcatgaggcg
     3961 attgcgcttc tcgccacgaa gttcatttgc ccgtacgtta ttgctcatcg tcaccttgct
     4021 gttcgccagc ctggtgacga cttatctggt ggtgctgaac ttcgcgattt tgccgagcct
     4081 ccagcagttt aataaagtcc tcgcgtacga agtgcgtatg ttgatgaccg acaaactgca
     4141 actggaggac ggcacgcagt tggttgtgcc tcccgctttc cgtcgggaga tctaccgtga
     4201 gctggggatc tctctctact ccaacgaggc tgccgaagag gcaggtctgc gttgggcgca
     4261 acactatgaa ttcttaagcc atcagatggc acagcaactg ggcggcccga cggaagtgcg
     4321 cgttgaggtc aacaaaagtt cgcctgtcgt ctggctgaaa acctggctgt cgcccaatat
     4381 ctgggtacgc gtgccgctga ccgaaattca tcagggcgat ttctctccgc tgttccgcta
     4441 tacgctggcg attatgctat tggcgatagg cggggcgtgg ctgtttattc gtatccagaa
     4501 ccgaccgttg gtcgatctcg aacatgctgc tttgcaggtc ggtaaaggga ttattccacc
     4561 gccgctgcgt gaatatggcg cgtccgaggt acgttcggtt acccgcgcct ttaaccatat
     4621 ggcggctggt gttaagcaac tggcggatga ccgcacgctg ctgatggcgg gggtaagtca
     4681 tgacttacgc acgccgctga cgcgtattcg cctggcgacc gagatgatga gcgaacagga
     4741 tggctacctg gccgaatcga tcaataaaga tatcgaagag tgcaacgcca tcattgagca
     4801 gtttatcgac tacctgcgca ccgggcagga gatgccgatg gaaatggcgg atctcaacgc
     4861 agtactcggt gaggttattg ctgccgaaag tggctatgag cgggaaattg aaaccgcgct
     4921 ttaccccggc agcattgaag tgaaaatgca cccgctgtcg atcaaacgcg cggtggcgaa
     4981 tatggtggtc aacgccgccc gttacggcaa tggctggatc aaagtcagca gcgggacgga
     5041 gccgaatcgc gcctggttcc aggtggaaga tgacggtccg ggaattgcgc cggaacaacg
     5101 taagcacctg ttccagccgt ttgtccgcgg cgacagtgca cgcaccatta gcggcacggg
     5161 attagggctg gcaattgtgc agcgtatcgt ggataaccat aacgggatgc tggagcttgg
     5221 caccagcgag cggggcgggc tttccattcg cgcctggctg ccagtgccgg taacgcgggc
     5281 gcagggcacg acaaaagaag ggtaaataaa cgggaggcga aggtgcctcc cgttttgctt
     5341 tctataagat actggataga tattctccag cttcaaatca ttacagtttc ggaccagccg
     5401 ctaccagcgc ggcacccgca ggggtgtcgg tgtatttatc gaagttgtcg ataaacagtt
     5461 tcgccagggt ttcggctttt tcctgccact gttccggaga agcgtaggtg ttacgcggat
     5521 cgagaatctt cgtgtctacg cccggcagtt cggttgggat cgccaggtta aacatcggca
     5581 gagtgaaggt ttctgcatta tccagcgaac cgttgaggat ggcgtcgata atggcgcggg
     5641 tatctttaat cgagatacgt ttgcctgtgc cgttccagcc agtgttaacc agataagcct
     5701 gcgcgcccgc cgcctgcata cgtttcacca gcacttctgc gtactgagtc gggtgcagcg
     5761 acaggaatgc cgcgccgaag caagcggaga aggttggcgt cggttcggtg atgccacgct
     5821 cagtaccggc cagtttggcg gtgaagccag agaggaagtg atactgggtt tgatcggcag
     5881 tcaggcgaga aaccggcggc aacacgccga aagcatcagc agtcaggaag ataaccttag
     5941 tcgcgtggcc cgctttggaa accggcttaa cgatgttatc gatgtgatag attggataag
     6001 aaacgcgggt gttctcggtt tttgaaccat catcaaagtc gatagtgcca tcttcacgca
     6061 cggtgacgtt ttccagcagc gcatcacgac ggatagcgtt gtagatttca ggttccgctt
     6121 ctttcgacag cttgatagtt tttgcgtagc agccgccttc gaaattaaac acgccgtcat
     6181 cgtcccagcc gtgttcgtca tcgccaatca ggcggcgttt cgggtcggtg gaaagggtgg
     6241 ttttaccggt gccggaaagg ccgaagaaca ccgcaacatc gcctttctcg ccaacgttgg
     6301 cggagcagtg catagaagcg atacctttca gcggcagcag gtagttcatc atcgagaaca
     6361 tccctttctt catttcgccg ccgtaccagg tgccgccaat cagctgcatg cgctcggtca
     6421 ggttaaacgc cacgaagttt tcggagttca gaccctgttc tttccactgc gggttagtgc
     6481 acttcgcgcc gttcataacg ataaagtctg gtttgaaacc tgccagctct tcatcgctcg
     6541 ggcgaataaa catgtttttg acaaaatgcg cctgccaggc cacttcggtg atgaaacgga
     6601 cggaaagacg agtatccggg ttcgcaccac agaaagcgtc gacaacgaac agacgtttgc
     6661 cggaaagctg cctggtcacc aggcctttca gatgctgcca ggtttccgga gagagaggtt
     6721 tgttgtcgtt cttacctttg cctttgtctg cccaccagaa agtatcgcga gtggtatcgt
     6781 cacggacgat atacttatct tttggtgaac gaccggtgaa gatcccggta tcgacggcaa
     6841 cggcacccag attagttaac accccgcgct cataacctgt caggctcgga tcgagctctt
     6901 cctgatacag caggtcgtag cttgggttgt aaacgatatc atgtacgtca ctgataccat
     6961 aagcctcgag ttcttgcggg gtcaaaccat tgttaacgcg catttcactg ctccttagcc
     7021 aatatgtatt gcctgaatag taaagtcttt ttgggggtgt taaccgcgac aaggctcata
     7081 gatttacgta tctggagaaa ttcatatttg acaaaaaacc ccgtgattcc tgttacgaaa
     7141 cggttgctat tatcgcagaa atagcatttt aggtgtggaa aatgttctca aaaggttaaa
     7201 tcttggttta tatggcggga atattgtgag tggaatcgca ttccttaatg aaattgatgc
     7261 aaattcaatc ggtaaagtat cgattcacca cgctaacttt ttttgattat tttctgaaaa
     7321 aagcaaaata ctactgcccg gatgcgataa ttaacccacc ttttgattct ggataaccaa
     7381 catggataac gttgaacttt caccggcaac acgctggggg atgattgcta ccggattact
     7441 tcaggggctg gtttgctacc tgttgatcgc ctggcttgcc ggaaaaaatc acagttggat
     7501 tgtttatggc gtgcctgcga ccgttgcgtt ttcatccgtt ttactcttct ccgtgatctc
     7561 ttttaaacag aagcgccttt ggggatggct ggcgctggtg tttattgcca cgacagggat
     7621 gagcggttgg ctgaagtggc aaactgatgg catgaacccc tggagagctg aaaaggcgat
     7681 ttgggatttt ggctgctatc tgctgttgat ggcaatgttg ttgctaccgt ggatacaaca
     7741 aagccttcgt atccgcaatt gcagtagccg ctatagctac ttttaccagt cagtatggca
     7801 taacgtactt atattactgg tgatttttct cgccaatggc ctgacgtggc tggtgctttt
     7861 actgtggggt gagttgttta aacttgttgg catcaagttt ttcaatacgc tcttttttgc
     7921 aaccgactgg tttatgtatc ttacattagg tctggttacc gcactggcgg tgattctcgc
     7981 gcgcacacag tcacgtttaa tcgactctat tcaaaagttg ttcacgttaa tcgccacggg
     8041 gttgctgcca ttagtatcat tgctaaccct gatgtttatc atcactctgc cgtttacggg
     8101 cctgagcgcg atttctcgcc acatctccgc cgccgggttg ctgttaacgc tggccttttt
     8161 gcaattgatc ttaatggcta ttgtccgcga tccgcaaaaa gcgtcacttc cctggacggg
     8221 gccgttgcgt tgcctgatta aaaccgcttt gctggttgct ccgctgtatg tgttcgtcgc
     8281 cgcctgggcg ttatggctgc gggtcgctca gtacggctgg actgtcgacc gcttgcaggg
     8341 cgcgctggcg gtgctggtgt tactggtgtg gtcgctgggg tattttgtca gtatcgtctg
     8401 gcgtaatggg caaaatcccc ttgttcttca gggcaaagtg aaccttgcgg tttcgttatt
     8461 ggtgttggtg atactggtgc ttcttaattc gccggtgctg gacagtatgc gtattagcgt
     8521 gaacagtcat atggcgcgtt atcagagcgg caaaaacacg ccagaccagg taactatcta
     8581 catgctcgaa cagagcggtc gctatggacg tgcggcgctt gagtcgctga aaagcgatgc
     8641 cgggtttatg aaagacccga aacgcgcgcg ggatctgctg atggcgttag atggagagca
     8701 acatcttcag gaacaggtat cggaaaaagt attagccgaa aatgtgttaa ttgcccctgg
     8761 ttctgttaaa ccggatgtga cattctggtc ggccttaatc caggatcgct ataacgtgat
     8821 gacctgtatt gaaaaagacg cctgcgtcct ggtcgagcaa gatctgaata gtgatggtca
     8881 ggcggagcgg atcctgtttg cttttaatga tgacagagtc attgtctatg gctttgactc
     8941 agacagaaaa gaatgggacg cgcttgatat gagtttactt ccgaacgaaa taacgaaaga
     9001 aaaattactc acagctgcga aggatggaaa actggggacg aggccgaaag cgtggcgcga
     9061 tctgacggta gatggtgaaa cgctggaaat aaacttaagt aagtgacaac gcttttatcg
     9121 gatacgacgc tgtatctgac caaaataatt tgcgatttat ttcataggcg ctggtaagcg
     9181 cagcacatca ggccattaag ttgtaaaatc cggcagagcc ctctctgccg gacatactca
     9241 ttaatgaact tgcggatctg ccggagacgc gttgttgcgg atttcagcaa tatccatcgc
     9301 attgaacaga tagtggttac cgcagtaatc acaatgcatg tcaatttcgc catcttccgc
     9361 caggatgcta tcaacttctt catcaggcag cgttttcagc gcatcggcgc aatgttcacg
     9421 cgagcaggtg catttgaact ccacatcctg cggatcgtaa accgtcacct cttcttcgtg
     9481 atacaaacgc cacaacactt cgtttgccgg taaggtcagc agttcttcgg ttttgatggt
     9541 ttcggttagc gtcgccaggt ggtcaaagtc gtcctgctgg gcattttgcg caggcattac
     9601 ctgcaacaac ataccgcctg cagccggttt gccgtctacg tcgccggtgc gaataaacag
     9661 gcgcgtcggc agctgttcag aacgcataaa gtaatcttcc aggcaggccg ccagggtatc
     9721 accttccaga ccaactacgc cctgatagcg ttcgccttcg ctcggggtaa tggtgatcac
     9781 cacgtaacca ttgccgacca gcgttttcag gtcggcattt tctggaattt cgccctgcac
     9841 gcgcgccaca ccgcgcattt gctggttatt gttaccgtta ataaccgcca gattcatcgg
     9901 accgtcgccc tgcagctgta cggtgatatc accatcaaac ttcagcgtag cggttaacag
     9961 gctggtcgca accagcagtt ctgccagcac gtttttaacg ggctgcggat aatcgtggtt
    10021 ctcaaggatc tgttgcaggg tttccgaaac ggttaccagt tcgccgcgaa cggcaaaatt
    10081 ttcaaacaga tagcgatgta attggtcatg ttgcggcata atcatctctc ttgcaggtga
    10141 cagttattca ctgtcgccgt gtttaaatcg taacaggtcg cggcgctctt ttttgtccgg
    10201 gcgtcggtcc gggtgcggca tggttaaggc attaagttta cgtgccatcg ccattttttc
    10261 gcgtttctct acactttccg cagtctcttc atacagcaag gctgcctcgc tggcggggcg
    10321 acgctgttca gtaatcgcct ttacaatcac cgtgcgttcg tcatttccct ggcgcagagt
    10381 gagcgtggca ttcagctcga cgattttgct cggcttgctg cgctgcccgt tgtaatgcac
    10441 cttaccgcct tcaatcattt cacgggctag cgcgcgggtt ttataaaaac gggcagccca
    10501 tagccattta tccagtcgaa cctcaacagc aggtttctct ttcatggcgt ctccttcaca
    10561 ttagcgaggg gatcaggcgg cggtagtcat tcagtgacgg atggcgttga tactgtttct
    10621 cggcaatccc ggaatcagga ttagtcacgc cgaggcagta acgaatacca aattgcgcgg
    10681 cagcatcgag aatcgcttcg ctgtcatcaa taaacagcgt tctttcagct ttcagacccg
    10741 tagcttcggc caccgcatgc cataaccgct gatcctcttt cggataacca aatgtgtggg
    10801 tggaaagtaa taaatcaagg tgtgcgtcca gacccgtatg ctcaagtttt accgccaggt
    10861 tgtgcggatg agcattggtg agcaaaattc gctgcttacc gctggctttc agtgcctcaa
    10921 gaaacggaat ggtatcttca cgcagtacgg cgcgcggtcc catctcggtg gtcattgcac
    10981 agatatccag acccagttgc tcactccagt aatcaagaca gtaccagttt agcgtatgct
    11041 gtacgtcgtg atattgctgg cgcatatatt ccatcgcttc ctgtggcgta accccgtttt
    11101 tcgcgcccca tgtttcaggc accagctttt gccagaaata gttatcgaag gcgaggtcga
    11161 gcaacgtgcc gtccatatcc agcagaacgg tatctacgtc ctgccaggca atgttgatat
    11221 gcatgaggga aatctccaga gtgaagcaat ttgcgcgaca gggtagcata acctgtcgcg
    11281 caaacgtgtt attcgataag gctttctgaa ggggtgatca gttgcgggtt caggcagctt
    11341 tcataatagg cctgaatctc catcatgcga gtgcgatgac gctggtaacg acgccaggcc
    11401 tgtacgccat tgtaaatggc gctacccagc atcgtcagta gcagcaatgt ggtgctgaga
    11461 tagcgccaca ggccggaacg atccgggatc ggatgaaggc caatatgctg cgtaccattg
    11521 gcgtcagtga agatttttgt gacgatacct tcggcgttaa acggcgtatg catcagcatt
    11581 tgtgccagtt tctggaaagc gttccactgt tcttgcggcg ggtagtcgta aagtgatgcc
    11641 gaaggccagg gctgatcaac aaaatcgctg ccttcgtcgc tgacaatcag gaatccgccg
    11701 ggggccggac tgtttagtga ttgtgccgct cgcgccgttt catgcgtgat aaacggcgcg
    11761 gtggaggttg ccaccaggtt atccagcgat tccgcactca ccgggcgtaa taacacattc
    11821 acgccatcga gcttcccggc gttggcgcgt tttaccagcg cgtcccagtc tttactgttg
    11881 ccgagattga ccagcgcatt tttcagtcgc acacagtcat ctttggcaga acataaatcc
    11941 gctgtcttca gtacaatgtc gccaaaatca tcaagcaata ccatgccgga tttttgaatc
    12001 gctgaacgta atgaggcact gacgcgagat tcatcttccg gtttagggtg cagctggcga
    12061 ttaactgctt cagtcaatgc cgtcgctttg ttgaccagtt cagattctgg taatggtaat
    12121 gagcgggcgt cattccagat gatctgcgag cagtcaaacg gtaaaaaagg tgaattggtt
    12181 ttcgcgctcc aggttccgga agtgcgaata ttacacattc ccgtaccgct aatacgcaat
    12241 gtatcgccta cccgcacgcc agcgtcagcc agttgtttta cgctggtggc ttcaatggtc
    12301 tgcgcgcctt tcatccatga gagagtgaat ttcagcggca tatccagcgg gatccagaat
    12361 aacagcataa acagcaccag cagcgagccc gcagcgataa tcgtactgcg cagccagtgc
    12421 tgtaacggaa agttttttac ttcatcatgc agcgaaagat atcgcccctg acgcactacg
    12481 tggcagtcga gatagatatc aatatcggtt tgttgatcga gatcctgagc aatgtatggc
    12541 tgccagtgtg cgggatagac caggtcgata ataccgagtg aaatattgtt gatctgttcc
    12601 tgatcgtttt cgccaaacaa tccccaacga cggggtgtac cgcgcagaca atgaatttcc
    12661 cgcagggagg attttgccgg gggcgcgaat agcccccaca gacctgcgcc cagcagcagt
    12721 aatgcgccgc ctgccagcca cggaacaaat acatccgggg taatcaggca gaaaaagaac
    12781 atcaggaagg aggcgacgat cagcaacgct tcacgcagcc cgcgcggacg actcagcgca
    12841 tattcttcat gcgtttcttt gcgaatattg agtagctcga tttgctcact ctcttccccg
    12901 cgaatcgacg cctgcgtgga cggaacaggt tgcaaggcat agccgcgcgt ttcctgcatg
    12961 tactcctgta gcgtatgacc gttgagtgaa ataaccaacg gcagcgaatc ggtatgaatc
    13021 agttcaacgg tattctcatc gttgatgtac tgttcccaga aggggggcag gtggacttct
    13081 accgaatcga ggtagtaacg ccatttattc ggatcgtcgg tagagatgcc gtaacgtgtg
    13141 atagcgtgtg tcagcatcat gacgttgttg ctttcggcat tcagcgccag agagatcggt
    13201 gccgcgctag ctcccgttgg gccaggcacc tgtaatacct gcgtcaggct ctcaagataa
    13261 ttttcaacgg cgctacgttc ttcaggtgtg agtttacgcg tttgcgcatc cgcgaaggcg
    13321 ttggtccagg gcagctgact ccgtctggat cgcactttta tcagccatcc cgcaagtagt
    13381 gagcaggcca gcaaagcagc taaaaaaatc acaatggtgc tcatgctttc cccatcttac
    13441 ttagtctgtc aggcgtggtc agtcgcacca gacacaatac atgattctgc ggttggctat
    13501 cggcaagcgt ggagtttaac ttgagcatca ttaagcacat cacagtaacc gctgatcata
    13561 gcaaaccctc tgaaggcgga atatcagcaa attcctagag ttatttcaac ctattgactt
    13621 ttaatttgat ttgaggacga ttatttatta agttacataa atgtaaataa catgcaattc
    13681 acattgccga aagcgtgtcc gatatcgcac aataaccgct gatttcacag catagatccc
    13741 acgatgagca aatcattaca aaaacccacc attctgaatg ttgaaactgt agcccgttcc
    13801 cgactgttta ccgtcgagag cgtggatctg gagttcagca atggcgtgcg gcgtgtttat
    13861 gaacgaatgc gtccaaccaa ccgggaagca gtgatgattg tgccgattgt ggacgatcac
    13921 ctgatcctga tccgcgaata cgcagtggga actgaatcct acgaattagg tttttcgaaa
    13981 ggattaattg atccgggtga aagcgtctac gaagccgcta accgcgagct aaaagaagag
    14041 gttggatttg gtgcgaacga tctgactttt ttgaagaagc tcagcatggc accgtcttac
    14101 ttttccagca aaatgaatat cgtggtcgcg caagatctct acccggaatc gctggaaggc
    14161 gatgagccag agccgctacc acaggtgcgc tggccgctgg cgcatatgat ggatttgctg
    14221 gaagaccctg acttcaacga agcgcgtaat gtcagcgcgc tgttcctcgt gcgcgaatgg
    14281 ttgaaagggc aggggcgagt gtaaatgcgt gaagtttgcc tgatgcacaa cgcttatcag
    14341 gcttatgggg ttcctgcaat atattgattt ttcacgattt tgttagccgg gtaacgcggt
    14401 cacccgcatc cagcataaac aaatgcactt tgtcagccaa ctgaaaaggc gccgaagcgc
    14461 ctttttaatc agaacaattc ctgtgcctca ccattatcga taatggtcgt tcccacctcg
    14521 tgcaccgcct gttgtgtcgg ctgcgtacct tcgatgaaat actcttcgcg gctgttgcca
    14581 ccattagcta actgcccggt gctgcgatcg atattcaccg tcacaatacc cggtggcggc
    14641 gtcagcggct gctccggcac accttcaaga acggctttca tataagcgtc ccatgcaggc
    14701 tgggcactct tggctccgcc ttcgtaacct gagatctgat ctttaatcgc tccggaagcc
    14761 gttgtatgac cgagattacg acggtgatca tcaaagccaa tccagaccga ggtcacaacg
    14821 cccggaccgt aacccgagaa ccacgcatct ttcgaactgt tagtggtacc ggttttcccg
    14881 ccgatatcgc gacgctgcaa atcacgacct gcacgccagc cagtaccctg ccagcctggc
    14941 tcaccaaaga tattggtgtt caaagcactc ttaatcagga atgccagcgg agtgttgatg
    15001 acgtgcggtg cgtactcctg cgcgccagtc ttcgccacta acgcctgatt tgcctgctcc
    15061 agctgcggca ttggtacaga aacattctgc tgctcgcggg agatagcgac atcttcaaca
    15121 tcgttatttt ccagcacgtt cgatttctgc gtatcaccgt aaatcaccgg aatatcgcat
    15181 tccgggcagg ctactttcgg tttcgcttcg aaaatcacgc cgccctgatc gttttcaatt
    15241 ttgctgataa accacgggtc caccaggaag ccgccgttcg ccatgaccgc gtagccgcgc
    15301 gccacctgca ttggggtgaa ggacgctgaa cccagcgcca gcgattcggt gtggacaatg
    15361 ttttgcgccg ggaagccgaa gcgttgcaga tattctgcag cgtagtcgac gcccatagcc
    15421 cgcattgcac gtaccatcac cacgtttttc gactgaccca gcccctgacg taagcgaatt
    15481 ggaccagcat attgtggcgg cgagtttttc ggctgccagt cagaaccggc acctgcgtcc
    15541 cagcgagaaa ttggcacatc gttcaacata cttgccagcg tcagaccttt atccatcgcc
    15601 gcggtgtaga ggaacggttt gatgttggaa cccacctgac gcagtgcctg ggtggcgcgg
    15661 ttaaacttgc tctgattgaa atcaaagcca ccgaccagcg ccataacggc accgttttgc
    15721 ggattgatcg acaccagcgc cgagttcact tccggcactt gtgccagcca ccatgcatcg
    15781 ccaacctgac gaacccagat ttgctgaccc gtttgcagaa catcggtcac tttacgcggc
    15841 gtcggtccct gctgagtatc cgaacggtaa ggacgcgccc agcgaacgcc ttccatactc
    15901 aatgcgacgg tcgacccgtc cgccagcatc gccgtcgctc cctgaggatt ggcgctggtg
    15961 actgcggcag gcagcagcgg accataggtc ggcagcgcct tcagcgtatc ggtaatcttg
    16021 ttgttatccc acgccgactc gcccactttc cacagcacat ttgccgggcc gcgatagccg
    16081 tggcgcatgt cgtagtccag cacgttatta cgtaccgcct gctgtgcggc ctgctgcact
    16141 ttgcgggtga tggtggtgta aatgcgataa ccgtcttcat aggcactttc gccataacgg
    16201 ttatacatct cctggcgcac catttcgctc aggtacggcg cagagaaagc aatctccggc
    16261 gcgtgatagt tagcgttaat cgcctcagtg cgtgtctgat cgaactgttg ttgggtgata
    16321 tacccttcat ccagcatccg cgacagtacg acgttacgcc gcgcgacggc acgatccatt
    16381 gagtagagcg gattaaaggt ggaaggcgct ttcggcagcc cggctatcac agccatttcg
    16441 ttcagcgtca gttggtcgac cgttttaccg aaatagactt gtgccgcagc accgacacca
    16501 taggcgcggt aaccgaggta aatcttattc agataaagct cgaggatctc gtctttcgtc
    16561 agcaactgtt caatgcgaat cgcgaggaag acttccttaa tcttacgcat cagcgtgcgt
    16621 tctggactga ggaagaagtt tctcgccagc tgctgggtaa tggtactcgc cccttgtgac
    16681 gcgtggccgg agaacagcgc cacacttgcc gcacggaaga tccccaccgg gtcaacgccg
    16741 tgatgctcgt agaagcggct gtcttccgtc gcgataaagg ctttcaccat ctccggcggg
    16801 atttgatcca acgtaaccgg aatacgacgt ttctcaccgt attgagcaat cagctcgcca
    16861 tcggcgctgt aaatctgcat cggaatttgc aggcgaacat cttttaatgt cgccacatcc
    16921 ggcagttgtg gctcgatgta gcggtatagg ccataaatcg agcctgctcc cagcagaatg
    16981 caacagactg caaggatcaa aaaatacttt acgaacttca ctggaaattt cccatttagt
    17041 ttcatttggg cagtttataa acaaacgcgc gttagtataa aggcaagcca gacgcattga
    17101 tatacccgtc agagtgacgg gtgataagga gatcatcaca atggcattta agatctggca
    17161 aattggtttg catttacaac agcaagaagc ggtagcggtt gcgatcgtgc ggggcgcaaa
    17221 agaatgcttt ttgcaacgct ggtggcggtt gccgctggag aacgacatta tcaaagatgg
    17281 gcggattgtt gatgcgcagc agctggctaa aacgttgtta ccttggagtc gcgaactgcc
    17341 gcagcgtcat cacattatgt tggcgtttcc cgccagtcgc acattacagc ggtcatttcc
    17401 gcgcccgtcg atgtcccttg gtgagcggga gcaaacggcc tggctgtcag ggacgatggc
    17461 ccgcgagctg gatatggatc cggactccct gcgcttcgat tacagcgaag actcactcag
    17521 tcccgcctat aacgtgactg ccgcgcaaag caaagagctg gcaacgctgc ttactctggc
    17581 agaaaggttg cgtgttcatg ttagtgcgat caccccggat gccagtgcat tacagcgatt
    17641 cctgcctttt ttaccttctc atcagcaatg tctggcctgg cgtgataacg aacagtggct
    17701 gtgggcgacg cgctatagct gggggcgcaa actggcggtg gggatgacta gcgcgaagga
    17761 gctggcggca gcgttattcg ttgatcccga cagcgtcgcg atatgtggcg aaggcggatt
    17821 tgacccctgg gaggccgttt ctgttcgtca gccgctgcta ccgccgcctg gtggagactt
    17881 tgccatcgcg ctggggctgg cgcttgggaa ggcgtactga tgaacccgcc aattaatttt
    17941 ttgccctggc gacagcaacg ccggaccgct tttctgcgtt tctggttgct gatgttcgtt
    18001 gcgcctctgc tgctggccgt cgggataacg ctaatactgc gtctgacagg cagcgccgaa
    18061 gcgcgcatag acgcagtttt gcttcaggcg gaacaacaac tcgcccgcag cttacagata
    18121 acgaagccac gtttgctgga gcaacagcag ttacgcaaac agcgttcgca acggcagcgc
    18181 cagcgacaat ttacccgcga ctggcaatct gcgctggaag cactggcggc gcttttaccc
    18241 gagcacgcct ggctgacaac gataagctgg cagcagggaa cgctggagat caaggggctg
    18301 acaacaagca ttaccgcgtt aaacgcacta gaaacgtcac tccgccagga tgcgtctttt
    18361 catctcaatc agcggggagc cacgcagcag gatgcgcagg gacgctggca atttgagtat
    18421 cagttaacaa ggaaggttag cgatgaacat gttctttgac tggtggttcg ccacatcacc
    18481 ccgcctccgc cagttttgct gggcattctg gttgctgatg ttagttacgc tcatttttct
    18541 gtcatcgaca caccatgaag agcgcgacgc attaattcga ttacgggcaa gtcatcacca
    18601 gcagtgggcc acactgtatc gcctggttga caccactccc ttcagcgaag aaaaaacgct
    18661 gcccttttcg ccactggatt ttcagttgcc cggcgcgcaa ctggtttcct ggcatccatc
    18721 cgcgcaggga ggtgagttgg cgttgaaaac gctgtgggaa gcagtgccgt cggcattcac
    18781 acggctggca gagcgcaacg tcagcgtgag ccgtttttcg ttaagcgtgg aaggtgatga
    18841 tcttttgttc acgctacaac tggagacgcc gcatgagggt taaacgctgg ttgttggcag
    18901 gtattgcatt gtgcctttta accggtatgc gtgacccttt taaaccgccg gaagatctat
    18961 gccggattag cgaacttagc cagtggcgct atcaggggat ggtagggcga ggcgagcgca
    19021 tcatcggtgt aataaaagac gggcaaaaga aatggcgacg ggtgcagcaa aacgatgtgc
    19081 tggaaaacgg ctggacaatt ttacagctga cgccagacgt actaacgctg ggtaccggga
    19141 caaactgcga accgccacaa tggttgtggc aacggcaagg agatacaaat gaagcaatgg
    19201 atagccgcac tactgttgat gctgataccc ggcgtacagg cggcaaagcc gcaaaaagtg
    19261 acgctgatgg tggatgacgt tccggtagct caggtgttgc aggcgctggc tgaacaggag
    19321 aagttgaacc tggtcgtgtc gccagacgtc agcggtacgg tgtcgttaca tctaacagat
    19381 gttccctgga agcaggcact acaaactgta gtgaaaagcg ccggactgat aacgcggcag
    19441 gaaggcaaca ttctctcagt gcattccatt gcctggcaga ataacaatat cgcccgccag
    19501 gaggcggagc aggcgcgggc gcaggcaaat ctgccgctgg aaaatcgcag tataaccctg
    19561 caatacgccg acgcgggaga actggcgaaa gcgggggaga agctactgag tgccaaaggg
    19621 agtatgaccg tcgataaacg caccaatcgc cttttgctac gagataacaa aacggcgtta
    19681 agcgcgcttg aacagtgggt agcgcaaatg gatctgccgg tcgggcaggt tgagctgtcg
    19741 gcgcatattg tcaccattaa tgaaaaaagt ttgcgtgagt taggcgtgaa atggacgctg
    19801 gccgatgcgc aacacgctgg tggcgttggg caagtcacca cgcttggtag cgacctctcc
    19861 gtagcgacgg cgacaacgca tgtcggtttt aacattgggc gcatcaacgg acgcttgctg
    19921 gatcttgagc tttccgcgct cgaacaaaaa cagcagctgg atattatcgc cagtccgcgt
    19981 ctgctggcct cacatcttca gcctgccagc attaaacagg ggagcgaaat tccatatcag
    20041 gtttccagcg gggaaagtgg cgcgacgtcg gtggaattta aagaggccgt cctggggata
    20101 gaggtcacgc ccacggtgtt acaaaaaggt cgcatccggc tgaaattaca catcagccag
    20161 aacgttccgg ggcaggtgct acagcaggcc gatggcgaag tgctggcgat tgataagcag
    20221 gagatcgaaa cgcaggtcga ggtcaaaagc ggagaaacgt tggcgctggg cggcattttt
    20281 acccgtaaaa ataaatcggg tcaggatagc gtaccgttgc ttggcgacat tccctggttc
    20341 gggcaattat ttcgtcatga cggaaaagaa tatgaacgac gcgagttagt ggtgtttatc
    20401 acgccacgac tggtttccag tgagtaaaca gccgtaaaag cggtaatgtt tttatgctga
    20461 acgtgtttca tctatttgac gcgcgcaggt atttagcata caaggagtac cgatttgaga
    20521 gttggcgctc ttcgctgcct gcgttccatg atgatgattt atcattcagg cggcattttg
    20581 ctgtcttttt tacgctaatc ttacccggtg atttatcgcc agagcggtgg tagcaaggca
    20641 gcgcgcttgc agcgaccaga tatgcagagg gatgggtgat ttattcagtt gccaaacccg
    20701 ctggagtatt gagataattt tcagtctgac tctcgcaata tcttatgagg tttcagttca
    20761 tgtcctgcgg cgctctctga gcgaagcggg tttatcatta acgaatagtc ttagtagtac
    20821 cgaaaaaatg gcagagaaac gcaatatctt tctggttggg cctatgggtg ccggaaaaag
    20881 cactattggg cgccagttag ctcaacaact caatatggaa ttttacgatt ccgatcaaga
    20941 gattgagaaa cgaaccggag ctgatgtggg ctgggttttc gatttagaag gcgaagaagg
    21001 cttccgcgat cgcgaagaaa aggtcatcaa tgagttgacc gagaaacagg gtattgtgct
    21061 ggctactggc ggcggctctg tgaaatcccg tgaaacgcgt aaccgtcttt ccgctcgtgg
    21121 cgttgtcgtt tatcttgaaa cgaccatcga aaagcaactt gcacgcacgc agcgtgataa
    21181 aaaacgcccg ttgctgcacg ttgaaacacc gccgcgtgaa gttctggaag cgttggccaa
    21241 tgaacgcaat ccgctgtatg aagagattgc cgacgtgacc attcgtactg atgatcaaag
    21301 cgctaaagtg gttgcaaacc agattattca catgctggaa agcaactaat tctggcttta
    21361 tatacactcg tctgcgggta cagtaattaa ggtggatgtc gcgttatgga gaggattgtc
    21421 gttactctcg gggaacgtag ttacccaatt accatcgcat ctggtttgtt taatgaacca
    21481 gcttcattct taccgctgaa atcgggcgag caggtcatgt tggtcaccaa cgaaaccctg
    21541 gctcctctgt atctcgataa ggtccgcggc gtacttgaac aggcgggtgt taacgtcgat
    21601 agcgttatcc tccctgacgg cgagcagtat aaaagcctgg ctgtactcga taccgtcttt
    21661 acggcgttgt tacaaaagcc gcatggtcgc gatactacgc tggtggcgct tggcggcggc
    21721 gtagtgggcg atctgaccgg cttcgcggcg gcgagttatc agcgcggtgt tcgtttcatt
    21781 caagtcccga cgacgttact gtcgcaggtc gattcctccg ttggcggcaa aactgcggtc
    21841 aaccatcccc tcggtaaaaa catgattggc gcgttctacc agcctgcttc agtggtggtg
    21901 gatctcgact gtctgaaaac gcttcccccg cgtgagttag cgtcggggct ggcagaagtc
    21961 atcaaatacg gcattattct tgacggtgcg ttttttaact ggctggaaga gaatctggat
    22021 gcgttgttgc gtctggacgg tccggcaatg gcgtactgta ttcgccgttg ttgtgaactg
    22081 aaggcagaag ttgtcgccgc cgacgagcgc gaaaccgggt tacgtgcttt actgaatctg
    22141 ggacacacct ttggtcatgc cattgaagct gaaatggggt atggcaattg gttacatggt
    22201 gaagcggtcg ctgcgggtat ggtgatggcg gcgcggacgt cggaacgtct cgggcagttt
    22261 agttctgccg aaacgcagcg tattataacc ctgctcaagc gggctgggtt accggtcaat
    22321 gggccgcgcg aaatgtccgc gcaggcgtat ttaccgcata tgctgcgtga caagaaagtc
    22381 cttgcgggag agatacgctt aattcttccg ttggcaattg gtaagagtga agttcgcagc
    22441 ggcgtttcgc acgagcttgt tcttaacgcc attgccgatt gtcaatcagc gtaacaacaa
    22501 gaaaggtcag gccgcttatc aagcggtcta ttagcttcag gttaattgca acgtggtaag
    22561 cattaacctt ttagtggggt gttaaatgga tgaattcaaa ccagaagacg agctgaaacc
    22621 cgatcccagc gatcgtcgta ctggtcgttc tcgtcaatct tctgaacgtt ctgagcgtac
    22681 tgaacgtggc gaaccgcaga tcaattttga tgatattgaa cttgatgaca ctgacgatcg
    22741 ccgtccgact cgtgcgcaaa aagagcgcaa tgaggaaccg gaaatcgaag aagaaattga
    22801 cgaatccgaa gatgaaaccg tggatgaaga gcgcgtagag cgtcgtccgc gtaagcgcaa
    22861 aaaagcagcc agtaaacccg cttctcgtca gtatatgatg atgggcgtcg gcattctggt
    22921 tctactgctg ttgatcatcg gtatcggttc tgcgctaaaa gccccctcga cctcttccag
    22981 cgatcaaacc gcgtctggcg ataagagtat tgatcttgca ggcaatgcga ccgatcaggc
    23041 gaatggggtg cagccagcgc cgggaaccac gtctgcggaa aatactcagc aggatgtttc
    23101 tctgccaccg atctcttcta cgccgactca agggcaaacc ccggcggcaa cggatggtca
    23161 acaacgtgtt gaagtgcagg gtgacctgaa caatgcgctg actcagccac aaaatcagca
    23221 acagttgaac aatgtggcgg tcaattccac attgccgacc gaacccgcga ctgtcgcgcc
    23281 tgttcgcaat ggcaatgcat cgcgtgacac ggcgaaaacg caaaccgctg aacgtccgtc
    23341 cactacgcgc ccagctcgtc agcaggcggt gattgaaccg aaaaaaccgc aagcaaccgt
    23401 gaaaacggag ccgaagccgg tagcacagac gccgaagcgt actgaacctg ctgcccctgt
    23461 ggcgagcacg aaggcaccgg ctgcgacttc tacgccagca ccaaaagaga cggcgactac
    23521 ggctccagta cagacggcat ccccggcgca aaccacggca acaccagccg ctggagggaa
    23581 gaccgcaggt aatgttggtt cgttgaaatc ggcaccgtcc agccattaca ctctgcagct
    23641 gagcagttcc tctaactacg acaacctgaa cggttgggcg aagaaagaga atctgaaaaa
    23701 ctacgttgtc tatgaaacga cgcgtaatgg tcagccgtgg tatgtcctgg tttctggcgt
    23761 gtacgcttcg aaagaagagg cgaaaaaagc ggtatctaca ttgccagcag atgttcaggc
    23821 caaaaacccg tgggcgaaac cgctgcgtca ggtacaggcc gatctgaagt aatcaaggtt
    23881 atctcccgca atggtttatc gttgcgggag ctgcctgaag cgctggatgc tgtcggagct
    23941 ttctccacag ccggagaagg tgtaattagt tagtcagcat gaagaaaaat cgcgcttttt
    24001 tgaagtgggc agggggcaag tatcccctgc ttgatgatat taaacggcat ttgcccaagg
    24061 gcgaatgtct ggttgagcct tttgtaggtg ccgggtcggt gtttctcaac accgactttt
    24121 ctcgttatat ccttgccgat atcaatagcg acctgatcag tctctataac attgtgaaga
    24181 tgcgtactga tgagtacgta caggccgcac gcgagctgtt tgttcccgaa acaaattgcg
    24241 ccgaggttta ctatcagttc cgcgaagagt tcaacaaaag ccaggatccg ttccgtcggg
    24301 cggtactgtt tttatatttg aaccgctacg gttacaacgg cctgtgtcgt tacaatctgc
    24361 gcggtgagtt taacgtgccg tttggccgct acaaaaaacc ctatttcccg gaagcagagt
    24421 tgtatcactt cgctgaaaaa gcgcagaatg cctttttcta ttgtgagtct tacgccgata
    24481 gcatggcgcg cgcagatgat gcatccgtcg tctattgcga tccgccttat gcaccgctgt
    24541 ctgcgaccgc caactttacg gcgtatcaca caaacagttt tacgcttgaa caacaagcgc
    24601 atctggcgga gatcgccgaa ggtctggttg agcgccatat tccagtgctg atctccaatc
    24661 acgatacgat gttaacgcgt gagtggtatc agcgcgcaaa attgcatgtc gtcaaagttc
    24721 gacgcagtat aagcagcaac ggcggcacac gtaaaaaggt ggacgaactg ctggctttgt
    24781 acaaaccagg agtcgtttca cccgcgaaaa aataattctc aaggagaagc ggatgaaaca
    24841 gtatttgatt gccccctcaa ttctgtcggc tgattttgcc cgcctgggtg aagataccgc
    24901 aaaagccctg gcagctggcg ctgatgtcgt gcattttgac gtcatggata accactatgt
    24961 tcccaatctg acgattgggc caatggtgct gaaatccttg cgtaactatg gcattaccgc
    25021 ccctatcgat gtacatctga tggtgaaacc cgtcgatcgc attgtgcctg atttcgctgc
    25081 cgctggtgcc agcatcatta cctttcatcc agaagcctcc gagcatgttg accgcacgct
    25141 gcaactgatt aaagaaaatg gctgtaaagc gggtctggta tttaacccgg cgacacctct
    25201 gagctatctg gattacgtga tggataagct ggatgtgatc ctgctgatgt ctgttaaccc
    25261 aggttttggc ggtcagtcgt tcattccaca aacactggat aaactgcgcg aagtacgtcg
    25321 tcgtatcgac gagtctggtt ttgacattcg actggaagtg gacggtggcg tgaaggtgaa
    25381 caacattggc gaaatcgctg cggcgggcgc ggatatgttc gtcgccggtt cggcaatctt
    25441 cgaccagcca gactacaaaa aagtcattga tgaaatgcgc agtgaactgg caaaggtaag
    25501 tcatgaataa gtttgaagat attcgcggcg tcgcttttga tctcgacggt acgctggttg
    25561 acagtgctcc cggtcttgct gctgcggtag atatggcgct gtatgcgctg gagttacccg
    25621 tcgcaggtga agaacgcgtt attacctgga ttggtaacgg cgcagatgtt ctgatggagc
    25681 gtgcattggc ctgggcgcgt caggaacgtg cgactctgcg taaaacaatg ggtaaaccgc
    25741 ccgttgatga cgacattccg gctgaagaac aggtacgtat tctgcgtaaa ctgttcgatc
    25801 gctactatag cgaggttgcc gaagagggga cgtttttgtt cccgcacgtt gccgatacgt
    25861 tgggcgcgtt gcaggctaaa ggcctgccgc taggcctggt caccaacaaa ccgacgccgt
    25921 tcgtcgcgcc actgctcgaa gccttagata ttgccaaata ctttagcgtg gttatcggcg
    25981 gcgatgatgt gcaaaacaaa aaaccgcatc cggacccgct gttactggtg gctgagcgga
    26041 tgggaattgc cccacaacag atgctgtttg tcggcgactc acgcaatgat attcaggcgg
    26101 caaaagcggc aggttgccca tcagttggct taacctacgg atataactac ggcgaggcta
    26161 tcgatctcag ccagcctgat gtaatttatc agtctataaa tgaccttctg cccgcattag
    26221 ggcttccgca tagcgaaaat caggaatcga aaaatgacta agcccatcgt ttttagtggc
    26281 gcacagccct caggtgaatt gaccattggt aactacatgg gtgcgctgcg tcagtgggta
    26341 aacatgcagg atgactacca ttgcatttac tgtatcgttg accaacacgc gatcaccgtg
    26401 cgccaggatg cacagaagct gcgtaaagcg acgctggata cgctggcctt gtatctggct
    26461 tgtggtatcg atcctgagaa aagcaccatt tttgttcagt cccacgtacc agaacatgcg
    26521 cagttaggct gggcactgaa ctgctatacc tacttcggcg aactgagccg catgacccag
    26581 tttaaagata aatctgcgcg ttatgccgag aacatcaacg ctggtctgtt tgactatccg
    26641 gtgctgatgg ctgcggacat cctgctgtat caaactaatc tggtaccggt gggtgaagac
    26701 cagaaacagc acctggaact gagtcgcgat atcgcccagc gtttcaacgc gctgtatggc
    26761 gagatcttta aggtgccgga gccgtttatt ccgaaatctg gcgcgcgcgt aatgtcgctg
    26821 ctggagccga ccaagaagat gtccaagtct gacgataacc gcaataacgt tatcggcctg
    26881 ctggaagatc cgaaatcggt agtgaagaaa atcaaacgcg cggtcactga ctccgacgag
    26941 ccgccggtag ttcgctacga tgtgcagaac aaagcgggcg tttccaacct gctggatatc
    27001 ctttctgcgg taacgggcca gagcatccca gaactggaaa aacagttcga aggcaagatg
    27061 tatggccatc tgaaaggtga agtggctgat gccgtttccg gtatgctgac tgaattgcag
    27121 gaacgctatc accgtttccg caacgatgaa gccttcctgc aacaggtgat gaaagacggc
    27181 gcagaaaaag ccagtgtaca cgcttcccgt acgctgaaag cggtgtacga agcgattggt
    27241 tttgtggcga agccgtaata tcaaaacgct cggacggtcc cctcgcccct ttggggagag
    27301 ggttagggtg aggggagcag gcaagcgcca gtgggaatta ccctttgctc gcattgtcga
    27361 ataaatcact tcgtcatcac tctgaaaccg gggaaacccg gtttttttat cctcatttgc
    27421 aataatccga aaaaatgtga agcgcctcgc cgtttccaca tctcacagtt gccacttatc
    27481 ttcattttaa tgaagatata aacattcatt ttattgaaaa tatattatgc gtcgaacgtt
    27541 tatcaaaaaa gaaggcgtcg tcatcacgac gctggcccgt tatttgttgg gtgaaaaatg
    27601 cggtaatcga ctgaaaacca tagatgagct ggcaactgaa tgccgttcat cggttggcct
    27661 gacgcaggcc gcgttgaaaa cgttggaatc aagtggagcg atacggattg aacgccgtgg
    27721 gcgcaatggc agttatctgg tcgaaatgga taacaaagcg ctgctgagtc atgtggatat
    27781 caataacgtt gtgtgtgcca tgcctttgcc ctatacccgc ttgtacgaag gtttagcaag
    27841 cgggctgaaa gcccagtttg atggcattcc tttttattat gcgcatatgc gtggcgcgga
    27901 tattcgtgtg gagtgtttgc ttaacggtgt ctatgacatg gcagtagttt cccgcctggc
    27961 ggcggaaagt tatctcagcc aaaacaattt gtgcatcgcc ctcgagcttg gcccgcatac
    28021 gtatgttggt gaacatcaac tgatatgccg caaaggtgag tctggaaatg ttaagcgagt
    28081 aggtctcgat agtcgttcgg cggatcagaa aatcatgacc gatgtctttt ttggcgatag
    28141 tgatgtggaa cgtgtcgatc tctcttatca cgagagttta caacgcattg ttaaaggcga
    28201 tgtcgatgcg gttatctgga acgtggtggc ggaaaacgaa ctgaccatgc tgggattaga
    28261 ggcgacgccg ctcacagacg atccgcgatt tttacaggcc accgaagccg tggtcctgac
    28321 gcgagtcgat gattacccaa tgcaacaact gctgcgtgcc gttgtagata aacacgccct
    28381 gctcgcccat caacaacggg tagtgagtgg ggaacaggaa ccgagttatt aaacgaaagg
    28441 catctgatat ggaaaccaga ctcaacctgc tttgcgaggc aggcgttatt gataaggaca
    28501 tctgcaaagg catgatgcag gtcgtcaacg tactggaaac agagtgccat ctgccggtgc
    28561 gcagtgagca aggaacgatg gcgatgacac atatggcgag tgcactgatg cgcagtcgcc
    28621 gtggtgaaga aatagagccg ctggataacg aattgctggc agagctggcg caatccagcc
    28681 actggcaagc cgttgtgcaa ttgcatcagg tgttgttgaa ggaattcgca ctggaagtta
    28741 atccgtgtga agaaggctat ttgctggcca acctttatgg attatggatg gctgctaacg
    28801 aagaggtttg aagctcccga caaatccacg tcgcacaacc taaatattca aaaaaatgaa
    28861 tatttaattc aaggaacaga aacgaggcaa caagatgttt gtagaagcat tgaaacgcca
    28921 gaacccggcg ctgatttccg ccgcactaag tttgtggcag cagggcaaga tcgccccgga
    28981 cagctgggtg atcgacgtgg atcaggtact ggaaaacggt aagcgactga ttgagacggc
    29041 gcggctttac ggcattgaac tgtatctgat gaccaagcag tttggccgta acccatggct
    29101 ggcggaaaaa ttgctggcat taggttacag cggcattgtg gcggtggatt acaaagaggc
    29161 gcgagtcatg cgccgcgctg gtttgtcggt ggcgcatcag gggcatctgg tacaaatccc
    29221 ttgtcatcag gttgctgacg ccgttgaaca gggcaccgac gtcatcaccg tgtttactct
    29281 cgacaaagcg cgggaagttt ctgcggcagc ggtgaaggcc ggacgtgtgc agtttgtgct
    29341 gctcaaagtt tatagcgacg atgattttct ttatccgggg caggagagcg gttttgtaca
    29401 gcattcgctg cacgaggtgg ttgctgaaat taagaaactg ccgggtctgc atttagccgg
    29461 acttacccat ttcccttgcc tgctttggga tgaggctgcc ggaaaagttt tgccgacacc
    29521 gaatcttcac acgctgatac aggcacggga tcaactggcg aaatctggta ttgcacttga
    29581 gcaactgaac gcgccttcag cgaccagctg cacttcgctg ccattactgg cgcaatacgg
    29641 tgtgactcat gccgaacccg gtcatgcgct gacgggcact attccggcaa accagcaggg
    29701 cgatcagtct gaacgtatcg cgatgctctg gttgagtgaa atctcccatc atttccgtgg
    29761 cgacagctac tgctacggcg gcggttacta ccgtcgtggt catgcgcaac atgcgttggt
    29821 gtttacgcca gaaaatcaaa agattactga aaccaatctc aaaactgtgg atgacagcag
    29881 tatcgactac accctgtcgc tggcaggcga gtttccggta agcagtgcag tggtgctctg
    29941 tttccgcacg cagatttttg tcacccgtag cgatgtggtg ctggtgtccg gtattcaccg
    30001 tggcgaaccg aaaatcgttg gtcgttatga cagtcttgga aactctctgg gggcgtaatg
    30061 gcgcgatttg tggtgttagt gattgatagc tttggcgtag gggcaatgaa agatgtcacg
    30121 ctggtgcgtc cgcaagatgc gggagcgaat acatgtggtc acatcctgag ccagttgccg
    30181 catttgcagc taccaacgct ggagaagctg gggctaatca acgcattggg ttatgcgcca
    30241 ggcgatatgc agccgtcaga ttccgcaacc tggggcgtgg cagagctgca acatgaaggt
    30301 ggcgatacct ttatggggca tcaggaaatt ttaggcacgc gcccgttacc gccgctgcgg
    30361 atgccttttt gcgatgtgat tgaccgtgtt gagcaggcat tagtatccgc cggttggcag
    30421 gtggagcgcc gtggcgatga actgcaattt ctgtgggtca atcaggcggt tgcgattggc
    30481 gataatctcg aggcggattt aggccaagtc tataacatta ccgccaatct ctctgtgatc
    30541 tcttttgacg acgcaatcaa aattggtcgt atcgtgcgtg agcaggtaca ggtcggtcgg
    30601 gtcattacat ttggtggcct gttaaccgac agtcaacgca ttctcgatgc cgcagaaagc
    30661 aaagaagggc gctttattgg tatcaatgcg ccgcgttctg gcgcttatga caacggcttc
    30721 caggtcgtgc atatgggcta cggtgtcgat aaaaaagtgc aggtgccgca aaaactgtat
    30781 gaggcgggcg tgccaaccgt gctggtgggt aaggtggcag atatcgtcag caatccttat
    30841 ggcgtgagct ggcaaaacct ggtggatagc cagcggatta tggatatcac cctcgacgaa
    30901 tttaacaccc atccgacggc gtttatttgc accaatatcc aggaaaccga cctcgctggt
    30961 catgcagaag acgtcgcacg ttatgccgaa cgtttgcagg tcgttgaccg taaccttgcc
    31021 cggcttgttg atgcgatgca gccagatgat tgcctggtcg tgatggcgga tcacggcaac
    31081 gatccgacca ttggtcacag ccaccatacc cgcgaagtgg tgccgctgct ggtttatcag
    31141 caaggcctgg ctgctacgca gctcggtgtg cgcaccacgc tttctgatgt gggagctacc
    31201 gtgtgtgaat ttttccgtgc gccaccgcca caaaatggtc gctcttttct ttcctccctc
    31261 cggtttgcag gagacaccct atgagttttg atccgacggg ttacaccctg gcccatgagc
    31321 atctgcatat tgatctctcc ggctttaaaa acaacgtgga ctgccgcctt gatcagtatg
    31381 cgttcatttg ccaggagatg aacgacctga tgacccgggg tgtacgtaat gtgattgaga
    31441 tgaccaaccg ttacatgggg cgcaatgcgc aatttatgct cggtgtaatg cgcgaaaccg
    31501 ggatcaacgt ggtggcctgt actggttatt accaggatgc gtttttcccg gaacatgtgg
    31561 tgacccgcag cgtgcaggaa ctggcgcagg agatggtcga tgaaattgaa cagggtatcg
    31621 atggcacgga gctgaaagcc gggctcatcg cggagatcgg ctccagcgaa ggaaagatta
    31681 cgccgctgga agagaaggta tttattgccg ctgcgctggc gcataaccag accggacgcc
    31741 cgatctccac gcatacgtcg ttcagcacca tggggctgga acaactggct ctgttgcaag
    31801 cccacggagt tgatctttcg cgcgtcaccg ttggtcactg cgatctgaaa gacaacctcg
    31861 acaacatttt gaagatgatc gatctcggcg cgtacgtgca gttcgacacc attggtaaga
    31921 acagttacta cccggacgaa aagcgcattg cgatgctcca cgcgctacgt gaccgtgggt
    31981 tgctgaaccg cgtcatgctg tcgatggata ttacgcgccg ctcccattta aaagccaatg
    32041 gtggttatgg ctatgactat ttattgacca cctttattcc gcaattgcgc cagtcaggat
    32101 tcagtcaggc cgatgtggat gtgatgttac gtgaaactcc ctctcaattt ttccaataag
    32161 gacagactca tgaaaaagat tggcgttgca ggcttacagc gtgagcagat taaaaaaacc
    32221 attgaagcga cggctcctgg cagttttgaa gttttcattc acaacgacat ggaagcggca
    32281 atgaaagtga aatccgggca actggattac tacatcggtg cgtgtaatac cggtgcgggc
    32341 gcggcattgt cgattgccat cgcggtgatt ggctataaca aaagttgcac cattgccaaa
    32401 ccaggcatta aagcgaaaga cgagcatatc gccaaaatga tcgctgaagg aaaagtggcg
    32461 tttggccttt ccgttgagca cgtcgaacac gcgattccga tgctgattaa ccatctgaaa
    32521 taaaaggcac gactatggat ctgtatattc agattatcgt ggtggcgtgc ctgacgggta
    32581 tgacatcgct tctggcgcat cgctcggcgg ctgtttttca tgacggcatc cgcccgatcc
    32641 tgccgcaact gattgaaggc tatatgaacc gtcgcgaggc ggggagtatc gcttttggtc
    32701 tgagcattgg ttttgtggcc tcggtgggga tctcttttac cctgaaaacc gggctgctca
    32761 acgcatggtt actctttctt cctaccgata tcctcggcgt actggcgata aacagcctga
    32821 tggcgtttgg tcttggcgct atctggggcg tgttgatcct tacttgcctg ttgccagtaa
    32881 accagctgct gaccgcgctg ccggtggatg tattaggtag cctcggggaa ttaagctcgc
    32941 cggtagtttc tgcttttgca ctgttcccgc tggtggcgat tttctaccag tttggctgga
    33001 agcaaagtct ggtcgccgcc gtggttgttc tgatgacccg tgtggtagtc gtgcgctatt
    33061 tcccacatct taaccctgaa tccatcgaaa tctttattgg catggtgatg ctgctgggga
    33121 tcgcgataac tcacgacctg cgtcatcgtg atgaaaatga tattgatgcc agcgggcttt
    33181 cggtgtttga agaacgcacg tcgcggatta tcaaaaactt accctatatc gccatcgtgg
    33241 gagcattgat tgccgccgtt gccagcatga agattttcgc cggcagtgaa gtgtcgatct
    33301 tcactctgga gaaagcgtac tccgcaggcg taacgccgga acaatcgcaa acgctgatca
    33361 accaggcggc actggcagaa tttatgcgcg ggctgggttt tgtaccgttg attgccacca
    33421 ccgccttagc aacgggtgtg tatgcagttg cgggctttac ctttgtttat gcggtgggct
    33481 atctctcgcc gaatccgatg gttgcagcgg tattaggcgc agtggttatt tcggcggaag
    33541 tcttgctgct tcgttctatc ggcaaatggc tgggacgcta cccgtcggtg cgtaatgcgt
    33601 cggataacat ccgtaacgcc atgaatatgc tgatggaagt ggcgctgctg gtcggttcga
    33661 ttttcgcagc aattaagatg gcgggttata ccggattctc tatcgcggtt gccatttact
    33721 tcctcaacga atccctgggc cgtccggtac agaaaatggc ggcaccggtc gtggcagtaa
    33781 tgatcaccgg tattctgctg aatgttcttt actggcttgg cctgttcgtt ccggcttaag
    33841 gaaggcacct atgaagacgt ttcctctgca aagcctgacg cttattgagg cgcagcaaaa
    33901 gcagtttgcg ctggtggaca cgatttgccg tcactttccc ggcgcggagt ttctaaccag
    33961 cggtgatttg ggcttaacgc cggggctgaa tcaaccgcgt attacccaac gggtggagca
    34021 ggtgctggct gatgcatttc acgcacaggc tgcggcgctg gtgcagggcg cggggactgg
    34081 cgcgattcgc gccgggctgg cagctttgct caaaccgggg cagcgtcttc tggtgcatga
    34141 cgcgcctgtt tacccgacga cacgggttat tattgagcag atggggctga cgcttattac
    34201 tgttgatttc aatgacctgt cggcactgaa gcaggtcgtc gacgagcaac aaccggatgc
    34261 ggcgctggtg cagcatacgc gccagcagcc gcaggacagc tacgtgctgg cagatgtgct
    34321 ggcaacgttg cgcgcggcag gtgttccagc gttaaccgat gacaactatg cggtgatgaa
    34381 ggtggcgcga atcggctgtg aatgcggcgc gaatgtctcg acattttcct gcttcaagct
    34441 atttgggcca gagggtgttg gtgcagtggt cggcgatgct gatgttatca accgtattcg
    34501 cgccacgctt tactccggcg gtagccagat ccagggcgca caggcgctgg aagtattgcg
    34561 ttgtctggtg tttgcgccag tgatgcacgc ggtgcaggca ggggtatctg aacggttgct
    34621 ggctttgctt aacggtggtg aggtgccgga agtgaaaagc gcggtgattg ctaatgcgca
    34681 gtcgaaggtg ttgattgtcg agtttcatca gccgattgcc gccagagtgc tggaagaggc
    34741 gcaaaagcgc ggtgccttgc cttacccggt gggtgcagag tcgaaatatg aaatcccgcc
    34801 gctcttttat cgcctttccg gaacgtttcg ccaggcgaat ccacaatcag aacattgtgc
    34861 gattcgcatt aacccgaatc gcagcggtga agagacggtg ctgcggattt tgcgtgagag
    34921 tattgccagt atttaatgct ggatagcacc gtcaagctaa attccgtact gaacggtccc
    34981 ctcgcccctt tggggagagg gttagggtga ggggaacgta cgggatgtaa aattcaacgc
    35041 gccagcatcg ccggatgcga tgctggcgca tcttatccgg cctacggtta atgtctttta
    35101 ttatcaatag ttaaggtgat gcgattggcg cggcagaaga gttcggagac gtgcaccggt
    35161 ttgtcattct gatcaaaggc gattttgctg atgcgaaaca acggttcgcc cagttcgcat
    35221 ttcagccatt ttgcctgcgg gcgggtggcg gcaaagatat cgatggtctt tttgtcgctg
    35281 accactcgcg tgtcaaaacg ctcctgaaat aactgatagg tggagcttcc ttcgacgtaa
    35341 atctcatcaa agtcaggata acgcgacagc gggatccatg aactatcaat aaacagcggc
    35401 tctttatcga gatacatcac ccggcagaga tggaacactt cgctgtttcc ggggatgttc
    35461 agctttttgc aaaacggcgc ggcgctgacc cgttcctgtt cgatcacttt ctctttcgtc
    35521 gccttgcctt gtgagacgcc aaaatcggta aaaccactga cagtaagcag ggcgttttca
    35581 actttctggc tttgtacaaa ggtgcctttt ccctgccagc ggatcagtac gccgtccgcc
    35641 actaagtcgc tgatggcttt gcgaatggta atgcggctga cgttatattg tgtacaaagc
    35701 tcgttttcgg tagggatctg ttgcccggcc tggtaaaccc cctgcgcgat atcatccagc
    35761 agtcgctggc ggacggtagc gtagaggagt tgatgagagt agcggtccgt agctgacata
    35821 atcgaccctg aaataaagaa tgaattactc ggattatagg gtcgttttcc ggcaagtaac
    35881 agcacgttgg cgtgaagatg ctcacgccaa cgttatacct accaggcacc gtggtactga
    35941 atggttttcg ccgcgcacgc cgttccctgc gccatcgcct gcggtaatgt catccccgca
    36001 gaccagccgc aaaggaatcc ggcaatgaac gaatctccgg cacccatggt gtcgataacc
    36061 gtcaccggtt caggagcctg acgccagaac tgcgcgccat cccaggcaat gctgccgttt
    36121 tcacccagcg tgacaatcac tgttcctgcg ccacgggcaa caatcgcttt catcttcaga
    36181 cgcagcgttt cgtcttcttg cggtgcggag gcaaaggcaa aatcgagatg cggcaccagt
    36241 gtctgccaga gcgggctgtc ccacttgtcg gagaagtcga aagcggtaag tttgcccgca
    36301 gcgtgcagct gtgggaatgc gtcttccgca tgtccccaga ttgccgcgtg cacaatgtca
    36361 tactgcgcca gccaggcgta atcctcttca ctcagggcaa agtcggccat cacgccttcg
    36421 gtgtagtcgc caaaaacgcg atcattgtcg tgcagttcca cctgagtttg tgcggtaacg
    36481 ccgtgtttcg tatggacatg gctgatatcg acgcccatgc gggcgagatc ctgcttcagc
    36541 tttgtgccgt agtcatcgtc acccacccag gtaatgcatc ccggctgtat gccgtagcga
    36601 gtgcagtaca ccgccacatt gaccgcatta ccgccagaaa acgctttatt cagttgcggg
    36661 tagatatcga cgcagttatc gccgattgtc gccagggttt tcatctctca tcctccggca
    36721 gcagcgcgcg aaagcgttcc agcgcctggc gggcatagag tctgggctcg ttcatataca
    36781 tcgtcaccag ctccaccgta cagtaaccct catagccccg ctcaataata tcgcgcatca
    36841 gttcccgcag cggcattttg ccttctccag gaatgtaatg cgtgtcgctg gccccgtcgc
    36901 tgtcgacaat atgcagatga cgtaatttat cgcccagttt gtcgaaataa ctcatcaccg
    36961 gttccgcctg gacatacggc gcgcaaatgt cgaccatgct gaacaggcgc ggcgaaggca
    37021 ccagcgccag cgcatgaagc acatcattag cattacacac gatgttcgat tcatacggcg
    37081 ttaacggttc gaggattaga tccatgccga tgttttccgc gtactcatac agttcgctta
    37141 ggttctctgc cagccgtccc cagataacat taggtggcgt gagatagccc gcgtgggccg
    37201 cggaaatcag cgtataaccc gcgttcatct cttttgccat atccatcgcc agcttgatca
    37261 tgtcgaggct ttcgcgacgc atatgttcat cgcccagcat catgttatac ggatagccat
    37321 tggtttctgg cgtatagccg ataatcggca tctgatacgt ctgcgccagc gccttgattt
    37381 gtttgatgcc gcccgctttt aagtccggcg cgaacgcgtg cgggcgaccg ccccaaattt
    37441 cgatgccgtc gtaacccagc tcgcttgcat cacgaaatgc gtgttcaata ggcagccgct
    37501 ggtggccgca ggtaaacata cctgttttta tcgggtaact ccttgcgtaa atccggcccg
    37561 ttgccgggcc gggcgaggga ttaatattcc accagaccac cgtaatagcg gcgttcatcc
    37621 gggttgtgat ctttgtaaat agacaggtag tagcagagcc actccattgg cacgaacatc
    37681 aggaacggtg ccagccacgg gtgcagccct tgcgaaattt cggcgtaatc gatgacgatc
    37741 acgttgtcag tacgctgttt aacaaagtta atggcgcgtt cggtggtgtg gcgactttca
    37801 tcattgccga gcaggaacag gaacggaacg cccggttcga caatctccag cgggccatgg
    37861 cggaactctc cgctctcaat cacgcagccg tgcgtccagg taaattccat cagcgttaca
    37921 atgccttctt tgtaacccag cggacgcagc ggacccgcag caacggtata aatcatcggc
    37981 cactggctgg ccagttcacc aagctggcgg cctttttctt cccaggtgcg taccagatga
    38041 ccgagcgcat tcggcaactg cttgagatcg tttttgatct tgccgatttc cgcgttcggc
    38101 gcgaggcggg tgatcatctc cagcaccacg ctgtagcaga gcagcaggtg aatttcccag
    38161 atacagtcgg cctgataatc aatgctaaat tccgccgccg aggtaatcgg gctgtccgcg
    38221 cgtttggtga acgccgcagt gagtgcgccg caggcccggc ccagctccag cgctttgatt
    38281 acctcttccg ttttaccgta gtcagaaacg ccaatcaccg cgcaacgatc gtcgaggcga
    38341 tacggggtgt tatcgcagaa ctcccagccg gaaatggcgt agacctgaag atcggaaaag
    38401 cgatccgcca gatgtttcgc cgcttgcgcc gcgttgagtg gcgagccgca ggcaacgaaa
    38461 taaatacgat caatgtcgcg cttcaccatc tcttccacga tggcgtgcac cagcggaacg
    38521 tcatggctga gaactttttc cacttcctga accatatttt cggtgaccag aaagtccacg
    38581 gtgcttttat caatatccaa cattttattt tctccagata acattacgac aaagcgttga
    38641 gctggcggct acgcttcgcc cagaaggcgt aagcaggcag accagtagca ataacgatga
    38701 cggcgcagat aaggccggga atcggtgccc agacaaaggt tgaggcgacc agaatgaggc
    38761 ttgacgcaat ggcgagggtg gtcatcagcc cgaaagcagg agtacgccac agcggtttgt
    38821 aatcgtcgcg tttacgacac cagatgatgg agccgaaggt gagggtattt ttgaaacaca
    38881 tcaccagggt gaaataaccc agcaggctgg tgagatcgga aacgaagatg aagaagagcc
    38941 ccagcgcccc ttgcaggatg atggagacat ccggcgtgtt gtatttcgga tgcacatggc
    39001 cgaagcattt aaagaacagg ttgtctttcg ccatcgcgta ttccagccgc ggctggtaca
    39061 tcacgcagct ggaaagcgaa ccaagaatga cgatcatcgc cgtgatggca acaaagatcc
    39121 cagcggtgct gccgagtgcg gggatccagg tcagggcgtc ggaaatcggc gtttcagaat
    39181 tggcgagttt gtcgaagggc atcaggtcgg aaatcaccag cgccagcagg gtgtagagca
    39241 ccagaaccag cagacaggaa ccaatcagcg ctcgtggcat ggtttttccg gggtttttaa
    39301 tttcgccggt catataacag atagaggcca tgccggtata cgaccaactg gtggcagaga
    39361 tccccgccag cagcgccata aagctgcccg ttgcgccaat cgcagtggtg gtaggggcgg
    39421 caaaattctc cgctttaaac cagaagatcc caaggccaat gacgatagtg aacgggataa
    39481 ttttggcgat ggtaattagc gtctgaaacg ctgcgccgcc ttcaacggag cgcaggtgta
    39541 gcaacataaa ggcgataatt aatccggcgg cgataaattt accgggcaac ggatcgatag
    39601 gcgttaaaaa gccaagattg ctgacaatcg ccagcgccat aatcgacaat gacggcgcat
    39661 cgttggccca gaagctggcc cagccggaga ggaaagccag cggtcggctt ccggcatttt
    39721 tcagataaac ataatctgcg ccattttccg gataagcggt ggatagttcc gcatagacgc
    39781 acatttgcgg gatcacaatt aacccgccaa tgacaaacgt gagcaccgta agccacggcg
    39841 tgcccgctac ttttgccact tcacccacag atacaaaaat accggagccg acggttgtcc
    39901 cgacggcgat tgcaagaacg gcccaaaatc cgagcttgcg ttggagttcc tggcttccca
    39961 tagcgatacc tttttcttgt ccaacacgtt gtaggggaga gtttgcagtc atttaaaagg
    40021 taacatgaca atgcatgatg aatataataa catatgatgt tatgtaatgc ggaggaagat
    40081 cacaaaattt cgcacaggat cgcgctgtgg ctaatgaatg tagttatcca attgaaatta
    40141 aagtgaaaat atttttacgg gtggggagca agaaggatat agaaacaaat acgccctcgg
    40201 aaaatccaga gggcgtcggg caattaaacc ggtgttagcc gatttctgtc agagacttac
    40261 tgtgcagtag gaccgcaacc gccaatgatt ttagaaatag aaattgccgg gtgcagcagg
    40321 tagtcgtaag agcagttctt atcacggttt tcaatatgac cagtacatgc agttaacgta
    40381 gccagtactg cacctaccag tgcaacttta ataaatttgt tcatttaca
//
LOCUS       DADKRT010000010        40404 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.010, whole genome shotgun sequence.
ACCESSION   DADKRT010000010 DADKRT010000000
VERSION     DADKRT010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 40404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40404
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.010"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(44..901)
                     /gene="murI"
                     /locus_tag="JQ356_000479"
     CDS             complement(44..901)
                     /gene="murI"
                     /locus_tag="JQ356_000479"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HAY4620671.1"
                     /translation="MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLL
                     PDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA
                     LREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
                     GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFE
                     TLEKLAVLG"
     gene            complement(846..2694)
                     /gene="btuB"
                     /locus_tag="JQ356_000480"
                     /pseudo
     CDS             complement(846..2694)
                     /gene="btuB"
                     /locus_tag="JQ356_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418401.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
     regulatory      complement(2748..2938)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3052..4152
                     /gene="trmA"
                     /locus_tag="JQ356_000481"
     CDS             3052..4152
                     /gene="trmA"
                     /locus_tag="JQ356_000481"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HAY4620672.1"
                     /translation="MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHY
                     RMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELY
                     CGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPCILYISCNPETLCKNLE
                     TLSQTHKVERLALFDQFPYTHHMECGVLLTAK"
     gene            complement(4192..4551)
                     /locus_tag="JQ356_000482"
     CDS             complement(4192..4551)
                     /locus_tag="JQ356_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HAY4620673.1"
                     /translation="MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLV
                     LTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIM
                     VFWIGAKMRNRKQEVAE"
     gene            complement(4551..5201)
                     /gene="fabR"
                     /locus_tag="JQ356_000483"
     CDS             complement(4551..5201)
                     /gene="fabR"
                     /locus_tag="JQ356_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HAY4620674.1"
                     /translation="MMGIRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE"
     gene            5522..6922
                     /gene="sthA"
                     /locus_tag="JQ356_000484"
     CDS             5522..6922
                     /gene="sthA"
                     /locus_tag="JQ356_000484"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418397.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HAY4620675.1"
                     /translation="MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNARFVDEHTLVLDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTH
                     PRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            complement(6905..7822)
                     /gene="oxyR"
                     /locus_tag="JQ356_000485"
     CDS             complement(6905..7822)
                     /gene="oxyR"
                     /locus_tag="JQ356_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HAY4620676.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
                     PYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPL
                     FDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGS
                     PLRSRYEQLAEAIRARMDGHFDKVLKQAV"
     gene            complement(8089..9462)
                     /gene="argH"
                     /locus_tag="JQ356_000486"
     CDS             complement(8089..9462)
                     /gene="argH"
                     /locus_tag="JQ356_000486"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HAY4620677.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     ASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDAFDT
                     WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEDLPLDELQKFSHVIGEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIA
                     FAQARLG"
     gene            complement(9523..10299)
                     /gene="argB"
                     /locus_tag="JQ356_000487"
     CDS             complement(9523..10299)
                     /gene="argB"
                     /locus_tag="JQ356_000487"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HAY4620678.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGL
                     FLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKV
                     NAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA"
     gene            complement(10307..11311)
                     /gene="argC"
                     /locus_tag="JQ356_000488"
     CDS             complement(10307..11311)
                     /gene="argC"
                     /locus_tag="JQ356_000488"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HAY4620679.1"
                     /translation="MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL
                     ISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDL
                     SGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ
                     LALKPLIDADLLDLNQWPAINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     ATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI
                     "
     gene            11465..12616
                     /gene="argE"
                     /locus_tag="JQ356_000489"
     CDS             11465..12616
                     /gene="argE"
                     /locus_tag="JQ356_000489"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HAY4620680.1"
                     /translation="MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFK
                     DLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHD
                     GKLYGLGTADMKGFFAFILDALRDIDVTKLKKPLYILATADEETSMAGARYFAETTAL
                     RPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQ
                     LRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNG
                     LLNDALAPVIERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEA
                     PFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELIIQVIHHFCWH"
     gene            12968..15619
                     /gene="ppc"
                     /locus_tag="JQ356_000490"
     CDS             12968..15619
                     /gene="ppc"
                     /locus_tag="JQ356_000490"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HAY4620681.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS
                     SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ
                     LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
                     DLFLKDIQVLVSELSMVEAPPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL
                     KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGELTRYLGIGDYKSWSEADKQAFLIRELNSKRPLLPRNWQPSAE
                     TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK
                     TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
                     EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYL
                     RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
                     VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL
                     RNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE
                     GQEPDPRVEQALMVTIAGIAAGMRNTG"
     gene            15802..17535
                     /gene="cptA"
                     /locus_tag="JQ356_000491"
     CDS             15802..17535
                     /gene="cptA"
                     /locus_tag="JQ356_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HAY4620682.1"
                     /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN
                     GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF
                     VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL
                     YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE
                     NNALPPLANFKDKSGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT
                     VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQDVLNDPAPKKLIIVHLLGT
                     HIKYKYRYPENQGKFDGNTDHVPPGLSAEELESYNDYDNANLYNDHVVASLIKDFKAA
                     DPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS
                     QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD
                     TLPYGDQVGNQ"
     gene            17750..18601
                     /locus_tag="JQ356_000492"
     CDS             17750..18601
                     /locus_tag="JQ356_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY4620683.1"
                     /translation="MYHDISYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLE
                     IVLEGEFVDTGAGATLVPGDVLYVAAGGWNFPQWKTPATTFSVLFGKQQLGFSVVQWD
                     GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ
                     IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL
                     NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT
                     EKPTTPE"
     gene            complement(18588..18929)
                     /locus_tag="JQ356_000493"
     CDS             complement(18588..18929)
                     /locus_tag="JQ356_000493"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY4620684.1"
                     /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALG
                     TENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVL
                     SAPQQTHLILE"
     gene            complement(18931..19809)
                     /locus_tag="JQ356_000494"
     CDS             complement(18931..19809)
                     /locus_tag="JQ356_000494"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[formate-C-acetyltransferase]-activating enzyme"
                     /protein_id="HAY4620685.1"
                     /translation="MTSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFF
                     KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA
                     LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
                     KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPG
                     FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVAT
                     MREMAERAGFQVTVGG"
     gene            complement(19775..22072)
                     /locus_tag="JQ356_000495"
     CDS             complement(19775..22072)
                     /locus_tag="JQ356_000495"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY4620686.1"
                     /translation="MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRA
                     KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA
                     ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIID
                     YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAVLAETMAANCT
                     DAQRREELLTIAEISRHNAEHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM
                     LPFYQASLTPGEDPAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT
                     ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRLGTGIPQIF
                     NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN
                     EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR
                     DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGE
                     KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP
                     LGSVVGATPDGRFAGEQLADGGLSPMLGQDEQGPTAVLKSVSKLDNTLLSNGTLLNVK
                     FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLWEAQQRPQDYAGLVVRVA
                     GYSAFFVELSKEIQDDIIRRTAHQL"
     gene            complement(22123..22443)
                     /locus_tag="JQ356_000496"
     CDS             complement(22123..22443)
                     /locus_tag="JQ356_000496"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY4620687.1"
                     /translation="MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIG
                     LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL
                     AQTA"
     gene            complement(22458..23537)
                     /locus_tag="JQ356_000497"
     CDS             complement(22458..23537)
                     /locus_tag="JQ356_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIC"
                     /protein_id="HAY4620688.1"
                     /translation="MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGA
                     VPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAG
                     FFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGA
                     LTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVVI
                     AAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVI
                     PSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVL
                     KSLARKNGSSTDEKEDDLDLDFEIN"
     gene            23846..26347
                     /gene="ptsP"
                     /locus_tag="JQ356_000498"
     CDS             23846..26347
                     /gene="ptsP"
                     /locus_tag="JQ356_000498"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY4620689.1"
                     /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRK
                     GNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE
                     LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALE
                     NGLTLVLKNIEFRLLDSDGATSSILEAHRSLAGDTSLRQHLLTGVSEGLSCAEAIVAS
                     ANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELT
                     PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDG
                     NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE
                     AQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG
                     DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSM
                     EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSN
                     DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL
                     PLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM
                     TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST
                     GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF
                     SRLARRIMHEEFRNALVNAASADAIASLLQHELEL"
     gene            26359..27021
                     /gene="fsa"
                     /locus_tag="JQ356_000499"
     CDS             26359..27021
                     /gene="fsa"
                     /locus_tag="JQ356_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY4620690.1"
                     /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLP
                     RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKMLKKE
                     GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPES
                     MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT
                     HL"
     gene            27032..28135
                     /gene="gldA"
                     /locus_tag="JQ356_000500"
     CDS             27032..28135
                     /gene="gldA"
                     /locus_tag="JQ356_000500"
                     /EC_number="1.1.1.6"
                     /EC_number="1.1.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional L-1,2-propanediol
                     dehydrogenase/glycerol dehydrogenase"
                     /protein_id="HAY4620691.1"
                     /translation="MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFA
                     QSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKA
                     LAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGA
                     PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAM
                     LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVA
                     FGTLTQLVLENAPVEEIETVAAFSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGE
                     TIHNMPGGATPDQVYATLLVADQYGQRFLQEWE"
     gene            28409..29026
                     /locus_tag="JQ356_000501"
     CDS             28409..29026
                     /locus_tag="JQ356_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HAY4620692.1"
                     /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR
                     QQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA
                     EYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
                     HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK"
     gene            complement(29053..29958)
                     /gene="yijE"
                     /locus_tag="JQ356_000502"
     CDS             complement(29053..29958)
                     /gene="yijE"
                     /locus_tag="JQ356_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine transporter YijE"
                     /protein_id="HAY4620693.1"
                     /translation="MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTAL
                     RCIFGALVLFIVLLLRGRGMHPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAIL
                     SYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILS
                     GVSWGASAIVAKRLYTRHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFW
                     ALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGS
                     GIVLIVLALALVSRKKKEAVSVKSI"
     gene            complement(30052..32232)
                     /gene="katG"
                     /locus_tag="JQ356_000503"
     CDS             complement(30052..32232)
                     /gene="katG"
                     /locus_tag="JQ356_000503"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HAY4620694.1"
                     /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG
                     PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI
                     IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR
                     ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI
                     EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFD
                     SSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADL
                     VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL"
     gene            complement(32561..33451)
                     /gene="metF"
                     /locus_tag="JQ356_000504"
     CDS             complement(32561..33451)
                     /gene="metF"
                     /locus_tag="JQ356_000504"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HAY4620695.1"
                     /translation="MSFFHASQRDALNQRLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            complement(33800..36232)
                     /locus_tag="JQ356_000505"
     CDS             complement(33800..36232)
                     /locus_tag="JQ356_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HAY4620696.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAF
                     VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE
                     RAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
                     SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAH
                     KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA
                     LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ
                     SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
                     GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF
                     HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL
                     SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR
                     EAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVA
                     RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
                     IQSDINRLAQLL"
     gene            complement(36235..37395)
                     /gene="metB"
                     /locus_tag="JQ356_000506"
     CDS             complement(36235..37395)
                     /gene="metB"
                     /locus_tag="JQ356_000506"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HAY4620697.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC
                     HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV
                     VTELAWWTNNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            37672..37989
                     /gene="metJ"
                     /locus_tag="JQ356_000507"
     CDS             37672..37989
                     /gene="metJ"
                     /locus_tag="JQ356_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HAY4620698.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET
                     WEY"
     gene            38173..38781
                     /locus_tag="JQ356_000508"
     CDS             38173..38781
                     /locus_tag="JQ356_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX family permuted papain-like enzyme"
                     /protein_id="HAY4620699.1"
                     /translation="MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATH
                     SDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQK
                     LAQTVKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
                     QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW"
     gene            38926..39601
                     /locus_tag="JQ356_000509"
                     /pseudo
     CDS             38926..39601
                     /locus_tag="JQ356_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(39773..40045)
                     /locus_tag="JQ356_000510"
     CDS             complement(39773..40045)
                     /locus_tag="JQ356_000510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620700.1"
                     /translation="MELQLSDKGVIKMKAIQCCYFLALVSSNLMAGVMGNDNIFLSNS
                     DSAALYCVAKIFPDGENILIYKVNIINASSKKDVFFMKAQHQPTMT"
     gene            complement(40011..40404)
                     /locus_tag="JQ356_000511"
                     /pseudo
     CDS             complement(40011..40404)
                     /locus_tag="JQ356_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312891.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
BASE COUNT         9949 a        11107 c        10042 g         9306 t
ORIGIN      
        1 ggaaatttaa aataattttc tgaccgcgca acattcaacc aaatcagcct aaaactgcca
       61 gtttttcgag cgtttcgaag ccgtaacgct gtaaaacggg caataattgt tcagcttctg
      121 gcgtcattgc catacaaaag gcaatattcg catcggcaga ttttgcatcc ggggcttcat
      181 gttctaacaa ccaggccgtt cggcgagcaa tcgctgcgcc agaatccact agccgggttc
      241 cctctggcag cacttgtaac agttcttctt gtagtagagg gaaatgggtg caacccaata
      301 caacggtatc tggcggctct ttcattctta accacgggcg taggatacgt tttagtgcat
      361 ccagagaaac atcttcgcca tgtagcttcg cttcagccaa ctcaaccatc tctgccgagc
      421 ccagcatttc tatctggcat tcattagcga aacgcgcgat cagctcatga gtataagaac
      481 gtttaactgt tccgcgggtt gccagtaatc cgacaatgcc atttgccgtc agacgtgcag
      541 caggtttaat cgccggcacg acaccaacaa ccgggaagtc gaacttttcg cgtaatgcag
      601 gaagtgaaac ggtactggca gtgttgcaag cgaccacagc cagcgcaagg ggataacgtt
      661 cttgcaccgc ggtgacaatt gccaccactc gctcaacaat aaacgcttcg cttttttcgc
      721 catacgggaa agcgacgtta tcgaaagcat aaatgtaatg gagatccggt aagagatgcc
      781 ggatctcgtc atagaccgac aacccaccga cgccggagtc aaacaccagc acggtgggac
      841 gtggttcaga aggtgtagct gccagacaag gtgtattccc gtcctgcagt ttggtagcca
      901 tagactgtct cataatcttt gtcgaacagg ttggctattt taccacgaac tgtcaggtga
      961 gaggtgaccg gatacgcaac cgcaagatcc cacaagctca caccgcccat tttaacggtt
     1021 tgataaggat aagatgagta atccttatca tagcgagtgc ctaaatactg ataagtaata
     1081 ccccagtcga agtcatacaa ctgccagtcg agctggtatt tcacctgctg tttagcacgg
     1141 cgtaacaacg gcgtgtcggt aatcgcattg cgcgcatcga cataatcata actcacagta
     1201 tgcgtcagtg gtccggtatc aaaattggcg gtcgcctcga cgcccttaat ccgcgctttc
     1261 ccttcgttgt aatatttcag ggtgtgatca tcataatcga tcaagtcact gacatcgtta
     1321 cgatatccgg aaatacgcca gttcacccca gcggttaagc cttcaaacgc gccttcccac
     1381 tgtttgcttt tctccgggtc cagattcgga tttccgtaga agccatacag ttgccccaga
     1441 tttggtgcct tataagatgt cccgtaggaa gcaatgaagc gataaccttc gatgaattcc
     1501 caaccggcgc tggtttgcca ggttccatga cgaccaaact gtgagttatc gtcactgcgt
     1561 gctgcgcctt caaaggtaaa atcgccgact tgttgcagcc cggtcagata gatgccggta
     1621 ttacgttgat catatccatc ctcaacataa cctgtacccg gcgtcgtagt ctgtttctgc
     1681 cagtcgacac ccgcaccaat actaccgtga ccaacgatga cattgtttgc ccactggacg
     1741 gtgtattgct tcatctcatc gagcgtcgcc gacgaatcat aacgaccata atggggatcg
     1801 tagttgtaat ctttgctatg gctatagctg gtaatgagtt gtgatttaat cagttcgccg
     1861 ttatagcgca gcccggcgtc ccaactttgg ctatagagtt tacggatatc gagcaacggt
     1921 gaaccgggag aataatacgc gtcataattg gtacggttat catagccata gccgcgcaca
     1981 aagccgctcc aggcatcagt aaagttatgc tccagcgcgc cataaagcgt tttacttaaa
     2041 aaaacatcgt tatctgtctg cgcttgcgtt ccggtattac cataggcaac aacatcataa
     2101 ccatgagtat gggcataatc gcccaacagc gttacccgtg tcttatcccc cagttgttgc
     2161 tgcgtagaga catcatagtt ctgataacta ttgcttcccc accctgctga aatttccgtt
     2221 ccggggtcat cgcgcgtcgt gatgatattc accaccccgc ctattgcatc ggaaccataa
     2281 acagcggagc gcggcccacg gatatattca acacgctgga caagcgcacg caatagggaa
     2341 ctggctaagg tcggcagaac cactcacccc cgccagattc aggcgtacgc catcaattaa
     2401 caccaacaca tgactggcat ttgtaccgcg aataaaaata gatgagagct gacctgaacc
     2461 gccgttttgg gtgatatcga cgcccggaag acggcgcagc acatcattga ccgaggtcga
     2521 ctgccagcgg tcgatatcct gacgggtcac aacggtggtt ggtgcaagca cagtgctgcg
     2581 cggctgttca aaacggttag cagtaacgac gagagtatcc gggctggtat cctgtgccca
     2641 agcggaaaag gctgtgacag aacacgccgt cagcagcgaa gcttttttaa tcattgtaaa
     2701 gcatccacaa tagaagaagg atgccgcagg tttcatcaat attacgcgat gatgagacgt
     2761 tggccggcag gtcttcgggc ttggaggggt atctaagata ctaagagatg atgacttccc
     2821 accggatggc agtgtccgca taacgcaatc atcgcacctt tccttaccgc tgcgcgtcag
     2881 ctccagattc gcactggatt ccctattaac tcacaggacc ggcaagtgga tgctacaggt
     2941 tgtaacaagt tactgtccag acgtagctca caaataggaa ttcatcaaga tctggacatc
     3001 tgatgagcaa tccctacaat cgccgcgtac tttaattttt caggatacat catgaccccc
     3061 gaacaccttc caacagaaca gtatgaagcg cagttagccg aaaaagtggt acgtttgcaa
     3121 agtatgatgg caccgttttc tgacctggtt ccggaagtgt ttcgctcgcc ggtcagtcat
     3181 taccggatgc gtgcggagtt ccgcatctgg cacgatggcg atgacctgta tcacatcatt
     3241 ttcgatcaac aaaccaaaag ccgtatccgc gtggatagct tccccgccgc cagtgaactt
     3301 atcaaccagt tgatgacggc gatgattgcg ggtgtgcgta ataatcccgt tctgcgccac
     3361 aagttgttcc agattgatta cctcaccacg ctgagtaatc aggcggtggt ttccctgcta
     3421 taccataaga agctggatga tgagtggcgt caggaagcgg aggccctgcg cgatgcactg
     3481 cgcgcgcaga atctgaatgt gcatctgatt ggtcgggcaa cgaaaaccaa aatcgagctg
     3541 gatcaagatt acatcgacga gcgtctgccg gtcgcaggga aagagatgat ctaccgtcag
     3601 gtagaaaaca gctttaccca gccgaacgcg gcgatgaata ttcagatgct ggaatgggcg
     3661 ctggacgtaa ccaaaggctc aaaaggcgat ttactggagc tgtactgcgg caacggtaac
     3721 ttttcattag cgctggcgcg caattttgat cgggtattag ccaccgaaat cgctaagccg
     3781 tcggttgctg ctgcgcaata caacatcgca gctaaccata ttgataacgt acaaattatt
     3841 cgtatggcgg cagaagaatt tactcaggcg atgaatggtg tgcgcgagtt taaccgcctg
     3901 caagggatcg acttaaagag ttatcagtgc gaaaccattt ttgtcgaccc accgcgcagc
     3961 ggtctggaca gtgaaaccga gaaaatggtg caggcgtatc cgtgtatttt gtacatctcc
     4021 tgtaacccgg aaacgttatg caagaatctg gaaacattaa gccagacgca caaggtcgaa
     4081 cgtctggctc tgtttgatca gttcccctac acgcaccata tggagtgcgg cgtattactg
     4141 accgcgaagt aaaacccatg ccggatgcgc cagcatccgg cataataccg attactcagc
     4201 aacttcctgc ttacggttac gcatcttcgc gccaatccag aacaccataa tgacggagag
     4261 tactgccggg aagaagttag agccgatatc cggatattcc gcacgaacta ccgtgctgta
     4321 cagcagtacg ccgagaataa aacaggcagc tgccagaccc ggcaagccta ccggcatagt
     4381 gcgattaaga taacgttgat gcaggcagta aaccgtcagc accagggaaa taatcgggaa
     4441 tacagaaaat ggcacaatgg agctaaacag cgctgcgaaa gtaccattaa tcgataagcc
     4501 agcaactaac gccagcagca gcgtacctct atcttgattt gcttgtttca ttactcgtcc
     4561 ttcacatttc ccggaataat tgcggttttc tcttgttcac ggcgatacca gtaataagcc
     4621 cctttcgaaa tcattcgcag ttgcagtacc agtcgctctt ctaattgccg acgttgttcg
     4681 acgccgacgt ccaacgcctc ggcacccgca ctgaagacaa ttgtcaccat tgcttcggct
     4741 tgcgcttcag taaacgcacg cggcatatgg ttttcgagtt ccagatagtc cgcaagttcc
     4801 gcaatgaagt gctgaatttc acgcgcaacg gcggcacgaa acgcagcgga ggtgccggag
     4861 cgttcccgca ataataaccg gaaggcgtta ggattattac cgatgaactc cataaatgtg
     4921 gagaccgagg tgcggatcac actcccgcct ttggcgatac gctgacgcgc ctggcgcatg
     4981 agttggcgta gcattaaacc gctctcatca accatggtca gacccagttc gtctacgtcg
     5041 cggaaatgcc gataaaaaga ggtgggagca atgcccgctt cacgcgccac ttcacgcaaa
     5101 ctcaggctgg cgaagctgcg ttcagcactt aattggctaa atgcggcttc caccagcgaa
     5161 cggcgggttt tttctttttg ttgcgctctt atgcccatca cgatgtctga atccttgcca
     5221 aaagtactgc tggcactata ccagagaatg aacatactgg attgctccag tattgtgaat
     5281 gaacggtaac gcaataaaac atatttactg gccggttctt ttacgtacag cggaaacctg
     5341 ccgcttaaac ggagagtatc gtcgataaaa atccaataaa acgtcagggc aaaagtaaga
     5401 aacagacaaa gcaaaggccg ctcaggatat agccagataa atgacgggga tcaattggct
     5461 tacccgcgat aaaatgttac cattctgttg cttttatgta taagaacagg taagccctac
     5521 catgccacat tcctacgatt acgatgccat agtaataggt tccggccccg gcggcgaagg
     5581 cgctgcaatg ggcctggtta agcaaggtgc gcgcgtcgca gttatcgagc gttatcaaaa
     5641 tgttggcggc ggttgcaccc actggggcac catcccgtcg aaagctctcc gtcacgccgt
     5701 cagccgcatt atagaattca atcaaaaccc actatacagc gaccattccc gactgctccg
     5761 ctcttctttt gccgatatcc ttaaccatgc cgataacgtg attaatcaac aaacgcgcat
     5821 gcgtcaggga ttttacgaac gtaatcactg tgaaatattg caggggaacg ctcgctttgt
     5881 tgacgagcat acgttggtgc tggattgccc ggacggcagc gtcgaaacac taaccgctga
     5941 aaaatttgtt attgcctgcg gctctcgtcc atatcatcca acagatgttg atttcaccca
     6001 tccacgcatt tacgacagcg actcaattct tagcatgcac cacgaaccgc gccatgtact
     6061 tatctatggt gctggagtga tcggctgtga atatgcgtcg atcttccgcg gtatggatgt
     6121 aaaagtggat ctgatcaaca cccgcgatcg cctgctggca tttctcgatc aagagatgtc
     6181 agattctctc tcctatcact tctggaacag tggcgtagtg attcgtcaca acgaagagta
     6241 cgagaagatc gaaggctgtg acgatggtgt gatcatgcat ttgaagtcgg gtaaaaaact
     6301 gaaagctgac tgcctgctct atgccaacgg tcgcaccggt aataccgatt cgctggcgtt
     6361 acagaacatt gggctggaaa ctgacagccg cggacagctg aaggtcaaca gcatgtatca
     6421 gaccgcacag ccgcacgttt acgcggtggg cgacgtgatt ggttatccga gcctggcatc
     6481 agcggcctat gaccaggggc gcattgccgc gcaggcgctg gtaaaaggcg aagccaccgc
     6541 acatctgatt gaagatatcc ctaccggcat ttacaccatc ccggaaatca gctctgtggg
     6601 caaaaccgaa cagcagctga ccgcaatgaa agtgccatat gaagtgggcc gcgcccagtt
     6661 taaacatctg gcacgcgcac aaatcgtcgg catgaacgtg ggcacgctga aaattttgtt
     6721 ccatcgggaa acaaaagaga ttctgggtat tcactgcttt ggcgagcgcg ctgccgaaat
     6781 tattcatatc ggtcaggcga ttatggaaca gaaaggtggc ggcaacacta ttgagtactt
     6841 cgtcaacacc acctttaact acccgacgat ggcagaagcc tatcgggtag ctgcgctaaa
     6901 tggcttaaac cgcctgtttt aacactttat cgaaatggcc atccattctt gcgcggatgg
     6961 cctctgccag ctgctcatag cggctgcgca gcggtgagcc aggacgataa accaggccaa
     7021 tcgtgcggcg aggttccggc ttaatacacg gcaaataaac aaccccatcg cgtttgcgct
     7081 ccggcggcac agccagcgca ggcagtaaag tgatcccgct acctgccgcc accatgttac
     7141 gcagtgtctc caggctggtc gcgcggaagt gtgtatcttc atccgccccg gcttcaaagc
     7201 agaaacccat tgcctgatcg cgcaaacagt gaccatcttc cagcatcagc agtttttccc
     7261 ctgccagatc ggccatcggt acgcattcgc ggttcgccca cgggtgatct tcatagatag
     7321 ccagcaacat tggctcatca aacaacggca cttcaatgaa tgcttcgctc tctttcacca
     7381 gcgcgaggat cacgcaatcg agtttgccgc tgtccagttg cgccagtaac tggtgggtct
     7441 gtgcttcatg cagatacatt tccagctttg gaaatgtctg gtgcagcatc gggataatat
     7501 gcggcagcag gtacggtcca accgtaggaa tcaaaccaat atgcagcggt ccggacatcg
     7561 tctcgccctg ctggcttgcc atctctttaa ggactttcac ctcacgcagc acggtacgcg
     7621 cctgatccac cagcagcatt cccgcctggg tgaacaacac tttacggctg gtccgctcca
     7681 gcaacatcac gcccagctca tcttccagct tacgaatttg gccgctaagc gtcggctggc
     7741 taacgtggca ggaatctgcc gcacgccgaa aatggcggtg ttcagccaat gccaccaggt
     7801 actcaagatc acgaatattc attatccatc ctccatcgcc acgatagttc atggcgatag
     7861 gtagaatagc aatgaacgat tatccctatc aagcattctg actgataatt gctcacagaa
     7921 acggagcggc acctctttta acccttgaag tcactgcccg tttcgagagt ttctcaactc
     7981 gaataactaa agccaacgtg aacttttgcg gatctccagg atccgctttt ttttgccata
     8041 aaaaagcccg gcgataagcc aggctcaaat ttgtacatat aaatgttctt accccaaccg
     8101 cgcctgcgca aaagcaatcg cttgggccac ctgctgcggt gagacgccgc cttttgccgc
     8161 acgcttgtcg aggcacgatt gtagcgacag aatcggatag acatcttcgc caatcacgtg
     8221 gctgaatttc tgcaactcgt cgagcggcag atcttccagc ggtttgccct gacgaatggc
     8281 ttccaccacc gcttcaccca cgatatggtg cgcctcgcgg aaaggtacgc ctttcgccac
     8341 caggtaatcc gccagttcgg tggcgttggc gtaaccctgc tgagccgctt cctggcaacg
     8401 tggacgtttc acctgaatgc cgtccagcac cagcgccgcc atatgcaggc agtccagcca
     8461 ggtatcgaac gcgtcgaaca gaccttcttt gtcttcctgc atatctttgt tgtaagccag
     8521 cggcaaacct ttcagcgtca tcatcatgcc ggttaacgca ccctgcaccc gaccgcattt
     8581 accgcgaatc agctccagcg catccgggtt tttcttctgc ggcattaatg atgaaccgga
     8641 agtcacgcgg tcagaaagct ccacaaaccc cgcttcgccg gtgttaaaga aaatcagatc
     8701 ttcagcaaaa cgcgacagat gcaccatgcc gatagcggca gccgacagca gttccaacac
     8761 atggtcacgg tcagaaacgc tgtccagact gttacgggtc gccgaagcaa agcccagcca
     8821 gcctgctaac tgttcacggt cgatttcata ggccgttccc gccagcgcgc cacagcctaa
     8881 tgggctgaca tccagacgct taagcgcatc ctgcaaacgg ctttcatcac gcgccagcat
     8941 ctcaacatag gccaggcacc agtgcgcgaa cgtcaccggc tgggcgcgtt gcaggtgagt
     9001 gtaacctggc attaccgcgt cctgattgtt ttgtgcggtt tccaccagcg ccgattgcag
     9061 ctgccggtta gccgtcagta actcgctaac ggtatctttg caccacagtt tcaggtcagt
     9121 cgctacctga tcattacggc tacgcccggt atgcagcttt ttgcctaact ggcccacttt
     9181 gtcgatcagt ttgccttcca cccagctatg gatatcttcg gcgtcgcttt caaggatttg
     9241 ttgtggcctg gcgcgaacat cttccagcaa cacgttcagc gcctcttcca gttgcgcctg
     9301 ctcttctgcg gttaacacgc cgaccgttac cagggctttg gaccaggcca cagagccaac
     9361 aatatcctgc tccgccagac ggtaatcaaa gcgcagtgag tcgttgaatt gtttgaaccg
     9421 ttgatctgct gcctgggtaa aacgcccgcc ccaaagtgcc ataactctgt ttccttattt
     9481 tgaaattcaa tgccggaaag ctgcgcctcc ggctaacaaa acttaagcta aaatccgcgt
     9541 acccatcggc ataccgttaa acagtgccgg aagctgctcc gcatgacgcc aggaggcgat
     9601 atctaccgga cggcccagcg tgcgggccgc atccagcgcc gcgttcactt tcactatcat
     9661 gccgtcagta ataatgccct gctcaatcag ttgttctgct ttcgcggcgg tcatttcggc
     9721 aatgcgttgc cctttgccgt cgagaatgcc gctgacgtcg gagagcaaaa tcagatccgc
     9781 gcccagcgtt gccgccagcg ccgttgccgc ctggtcggca ttgacgttca tcagttgccc
     9841 ttcgtctgtt acgccaatgg agctgaccac cggcagataa ccgttctcca gcaaggagtt
     9901 gataagctta ggcgaacctg gctgcgccag tccaacatga cctaactctt catcaagctg
     9961 ggtcactttg acgctgtcgc catcaccgag aaacaaacct acagccgcaa tctgatgttt
    10021 cttcgcccat gccaacaggg ttttatttgc cgttcccgcc agtgctccgg tgataatgtc
    10081 tatctgatca gcaggcgtca cccgcaggcc gtttttcttt ttcaccggca gattcagccc
    10141 tttcatcagc tcatccacca cgcaaccgcc gccgtgcaca atcaccagcg gacgctgatg
    10201 tgactcacga taattcacca gtgcgctaaa cagacgttcc agcgcctctt cactatccag
    10261 cagtacgccg cccagtttga taattaatgg attcatcatt gcccccttaa ataagagact
    10321 gcgtttccgc atagccgaaa cgaatattgg cgcactgtac cgcttgtgcc gccgcgcctt
    10381 tcagtaagtt gtcttcggtc gccacaataa tcagatgctc gccctgaacg gcaaacccga
    10441 tatcgcaaaa tggcagccca acgacatttt tcagcgccgg aacgcctttg tcatacagcc
    10501 gcaccagcgg tttatgggca tacgcctgct gtaacacttg cgcgacttgc gcctgggtca
    10561 cacccgattt caggcggcag gtaatggttt cgagaatgcc gcgcgggaaa ttgcccagat
    10621 gtggggtgaa gataacgtca gcaccgaggt gtgtggcgat ctctggttga tggcgatgag
    10681 taaagacgcc atacggttgc aggctaactt cacaaaaact atttgaaatc gctgccttac
    10741 gtcctgcacc gctcacgccg ctggtggcgt taatcgccgg ccactgattg aggtcaagaa
    10801 gatcggcatc aatcaacggt ttcagcgcca gctgtgccgc cgtcggataa cagcctggca
    10861 ccgcaatcaa attcgcttct tttaatttat taccgcacca ctccgccaga ccgtaggctg
    10921 cctgttccag cagttccggg tattgatggg taaagccgta atatttttca tagaaggtgg
    10981 cgtcgttaac acgaaacgcg ccggaaaggt cgaacaccac gcagcccgct tcaagaaact
    11041 gcggcgctaa atcgtggcta acttcatggg cggtggcgag aaacactacg tccacccctg
    11101 ggctaaactc gctgatatcc gacatcggct gcaacggcag ctcaacgatg ccttttagct
    11161 gcggatgcaa atcggagatt aactttcccg catcattgct ttgcgctgaa acagtcaaag
    11221 cggttatgtt catatgcgga tggcgattta cataggtcac tagctctgcg ccagcgtagc
    11281 cgctggcacc cacaatcagc gtattcaaca tcggggctat tcaccttctt atgtctggtt
    11341 gccaggttaa acgtaaaaca ttcaccttac ggctggtggg ttttattacg ctcaacgtta
    11401 gtgtattttt attcataaat actgcatgaa tattgatact atcatgacca gaggtgtgtc
    11461 aacaatgaaa aacaaattac cgccatttat cgagatttac cgcgctctga ttgccacacc
    11521 ttcaataagc gctacggaag aggcactcga tcaaagcaat gcagatttaa tcactctgct
    11581 ggcggactgg tttaaagatt tgggcttcaa tgtggaagtg cagcctgttc caggaactcg
    11641 caacaaattc aatatgctgg caagtatcgg acagggggct ggcggcttgt tgctggcggg
    11701 gcataccgat acggtgccat ttgatgacgg tcgctggacg cgcgatccgt ttacactgac
    11761 ggagcatgac ggcaagcttt acggcttagg caccgccgac atgaaaggct tttttgcgtt
    11821 tatccttgat gcgctacgcg atatcgacgt cacgaaactg aaaaaaccgc tctacattct
    11881 ggcgactgct gatgaagaaa ccagtatggc cggagcgcgt tattttgccg aaactaccgc
    11941 cctgcgcccg gattgcgcca tcattggcga accgacgtca ctacaaccgg tacgcgcaca
    12001 taaaggtcat atctctaacg ccatccgtat tcagggtcag tcggggcact ccagcgatcc
    12061 agcacgcgga gttaacgcta tcgaactaat gcacgacgcc atcgggcata ttttgcaatt
    12121 gcgcgataac ctgaaagaac gttatcacta cgaagcattt accgtgccat accctacgct
    12181 caacctcggg catattcacg gtggcgacgc ttctaaccgt atttgcgctt gctgtgagtt
    12241 gcatatggat attcgtccgc tgcctggcat gacactcaat gaacttaatg gtttgctcaa
    12301 cgatgcattg gctccggtga tcgaacgctg gccgggtcgt ctgacggtcg acgagctgca
    12361 tccgccgatc cctggctatg aatgcccacc gaatcatcaa ctggttgaag tggttgagaa
    12421 attgctcgga gcaaaaaccg aagtggtgaa ttactgtacc gaagcgccgt ttattcaaac
    12481 gttatgcccg acgctggtgc tcggtccggg ttccatcaat caagctcatc agcctgatga
    12541 atatctggag acgcggttta ttaaacccac ccgtgagttg attatccagg taattcacca
    12601 tttttgctgg cattaaaacg taggccggat aaggcgctcg cgccgcatcc ggcaccgttg
    12661 ccaaactccg gtgccgcaat aatgtcggat gcgatgcttg cgcatcttat ccgacctaca
    12721 cctttggtgt tatgtatggc gattttttaa catttccata agttacgctt atttaaagcg
    12781 tcgtgaattt aatggcgtaa attcctgcta tttattcgtt tgctgaagcg atttcgcagc
    12841 atttgacgtc accgctttta cgtggcttta taaaagacga cgaaaagcaa agcccgagca
    12901 tattcgcgcc aatgcgacgt gaaggataca gggctatcaa acgataagat ggggtgtctg
    12961 gggtaatatg aacgaacaat attccgcatt gcgtagtaat gtcagtatgc tcggcaaagt
    13021 gctgggagaa accatcaagg atgcgttggg agaacacatt cttgaacgcg tagaaactat
    13081 ccgtaagttg tccaaatctt cacgcgctgg caatgatgct aaccgccagg agttactcac
    13141 caccttacaa aatttgtcga acgacgagct gctgcccgtt gcgcgtgcgt ttagtcagtt
    13201 cctgaacctg gccaacaccg ccgagcaata ccacagcatt tcgccgaaag gcgaagctgc
    13261 cagcaacccg gaagtgatcg cccgcaccct gcgtaaactg aaaaaccagc cggaactgag
    13321 cgaagacacc atcaaaaaag cagtggaatc gctgtcgctg gaactggtcc tcacggctca
    13381 ccctaccgaa attacccgtc gtacactgat ccacaaaatg gtggaagtga acgcctgctt
    13441 aaaacagctc gataacaaag atatcgctga ctacgaacac aaccagctga tgcgtcgcct
    13501 gcgccagtta atcgcccagt catggcatac cgatgaaatc cgtaagctgc gtccaagccc
    13561 ggtagatgaa gccaaatggg gctttgccgt agtggaaaac agcctgtggc aaggcgtacc
    13621 aaattacctg cgcgaactga acgaacaact ggaagagaac ctcggctaca aactgcccgt
    13681 cgaatttgtt ccggtccgtt ttacttcgtg gatgggcggc gaccgcgacg gcaacccgaa
    13741 cgtcactgcc gatatcaccc gccacgtcct gctactcagc cgctggaaag ccaccgattt
    13801 gttcctgaaa gatattcagg tgctggtttc tgaactgtcg atggttgaag cgccccctga
    13861 actgctggcg ctggttggcg aagaaggtgc cgcagaaccg tatcgctatc tgatgaaaaa
    13921 cctgcgttct cgcctgatgg cgacacaggc atggctggaa gcgcgcctga aaggcgaaga
    13981 actgccaaaa ccagaaggcc tgctgacaca aaacgaagaa ctgtgggaac cgctctacgc
    14041 ttgctaccag tcacttcagg cgtgtggcat gggtattatc gccaacggcg atctgctcga
    14101 caccctgcgc cgcgtgaaat gtttcggcgt accgctggtc cgtattgata tccgtcagga
    14161 gagcacccgc cataccgaag cgctgggcga gctgacccgc tacctcggta tcggcgacta
    14221 caaaagctgg tcagaggccg acaaacaggc gttcctgatc cgcgaactga actccaaacg
    14281 tccgcttctg ccgcgcaact ggcaaccaag cgccgaaacg cgcgaagtgc tcgatacctg
    14341 ccaggtgatt gccgaagcgc cgcaaggctc cattgccgcc tacgtgatct cgatggcgaa
    14401 aacgccgtcc gacgtactgg ctgtccacct gctgctgaaa gaagcgggta tcgggtttgc
    14461 gatgccggtt gctccgctgt ttgaaaccct cgatgacctg aacaacgcca acgatgtcat
    14521 gacccagctg ctcaatatcg actggtatcg cggcctgatt cagggcaaac agatggtgat
    14581 gattggctat tccgactcag caaaagatgc gggcgtgatg gcagcgtcct gggcgcaata
    14641 tcaggcacag gatgcattaa tcaaaacctg cgaaaaagcg ggtattgagc tgacgttgtt
    14701 ccacggtcgc ggcggttcca ttggtcgcgg cggtgcacct gcccatgcgg cactgctgtc
    14761 acaaccgcca ggaagcctga aaggcggcct gcgcgtaacc gaacagggcg agatgatccg
    14821 ctttaaatat ggtctgccag aaatcaccgt cagcagcctg tcgctttata ccggggcgat
    14881 tctggaagcc aacctgctgc caccgccgga gccgaaagag agctggcgtc gcattatgga
    14941 tgaactgtca gtcatctcct gcgatgtcta ccgcggctac gtacgtgaaa acaaagattt
    15001 tgtgccttac ttgcgctccg ctacgccgga acaagaactg ggcaaactgc cgttgggttc
    15061 acgtccggcg aaacgtcgcc caaccggcgg cgtcgagtca ctacgcgcca ttccgtggat
    15121 cttcgcctgg acgcaaaacc gtctgatgct ccccgcctgg ctgggtgcag gtacggcgct
    15181 gcaaaaagtg gtcgaagacg gcaaacagag cgagctggag gctatgtgcc gcgattggcc
    15241 attcttctcg acgcgtctcg gcatgctgga gatggtcttc gccaaagcag acctgtggct
    15301 ggcggaatac tatgaccaac gcctggtaga caaagcactg tggccgttag gtaaagagtt
    15361 acgcaatctg caagaagaag acatcaaagt ggtgctggcg attgccaacg attcccatct
    15421 gatggccgat ctgccgtgga ttgcagagtc tattcagcta cggaatattt acaccgaccc
    15481 gctgaacgta ttgcaggccg agttgctgca ccgctcccgc caggcagaaa aagaaggcca
    15541 ggaaccggat cctcgcgtcg aacaagcgtt aatggtcact attgccggga ttgcggcagg
    15601 tatgcgtaat accggctaat cttcctcttc tgcaaaccct cgtgcttttg cgcgagggtt
    15661 ttctgaaata cttctgttct aacaccctcg ttttcaatat atttctgtct gcattttatt
    15721 caaattctga atataccttc agatatcctt aaggaattgt cgttacattc ggcgatattt
    15781 ttttcaagac aggttcttac tatgcattcc acagaagtcc aggctaaacc cctttttagc
    15841 tggaaagccc tgggttgggc actgctctac ttttggtttt tctctactct gctacaggcc
    15901 attatttaca tcagtggtta tagtggcacc aacggcattc gcgactcgct gttattcagc
    15961 tcgctgtggt tgatcccggt attcctcttt ccgaagcgga ttaaaattat tgccgcagta
    16021 atcggcgtgg tgctatgggc ggcctctctg gcggcgctat gctactacgt catctacggg
    16081 caggagttct cgcagagcgt tctgtttgtg atgttcgaaa ccaacaccaa cgaagccagc
    16141 gagtatttaa gccagtattt cagcctgaaa attgtgctta tcgcgctggc ctatacggcg
    16201 gtggcagttc tgctgtggac acgcctgcgc ccggtctata ttccaaagcc gtggcgttat
    16261 gttgtctctt ttgccctgct ttatggcttg attctgcatc cgatcgccat gaatacgttt
    16321 atcaaaaaca agccgtttga gaaaacgttg gataacctgg cctcgcgtat ggagcctgcc
    16381 gcaccgtggc aattcctgac cggctattat cagtatcgtc agcaactaaa ctcgctaaca
    16441 aagttactga atgaaaataa tgccttgccg ccactggcta atttcaaaga taaatcgggt
    16501 aacgaaccgc gcactttagt gctggtgatt ggcgagtcga cccagcgcgg acgcatgagt
    16561 ctgtacggtt atccgcgtga aaccacgccg gagctggatg cgctgcataa aaccgatccg
    16621 aatctgaccg tgtttaataa cgtagttacg tctcgtccgt acaccattga aatcctgcaa
    16681 caggcgctga cctttgccaa tgaaaagaac ccggatctgt atctgacgca gccgtcgctg
    16741 atgaacatga tgaaacaggc gggttataaa accttctgga tcaccaacca gcagacgatg
    16801 accgcccgca ataccatgct gacggtattt tcgcgccaga ccgacaagca gtactacatg
    16861 aaccagcaac gtacgcagag tgcgcgtgaa tacgacacca acgtgctgaa gccgttccag
    16921 gatgtgctga atgaccctgc gccgaagaaa ctgatcatcg ttcatctgct gggtacgcat
    16981 atcaaataca aataccgcta cccggaaaat cagggcaagt ttgatggcaa taccgatcat
    17041 gttccgccag gattaagcgc agaagagctg gaatcatata acgattatga caacgctaac
    17101 ttgtataacg atcatgtggt tgccagcctg attaaagact ttaaagcggc agacccgaac
    17161 ggattcctgg tttacttctc tgaccacggt gaagaggttt acgacacgcc gccgcacaaa
    17221 actcaggggc gtaacgaaga caacccgacg cgccacatgt acaccattcc gttcctgctg
    17281 tggacgtcgg aaaaatggca agcgactcat ccccgtgatt tctcacagga tgtcgatcgt
    17341 aaatacagcc tggcggaact gatccacacc tggtcagatt tggcgggctt atcttacgac
    17401 ggttacgatc caacccgttc agtggtgaat ccgcagttca aagaaactac ccgctggatt
    17461 ggtaacccgt acaagaaaaa cgcgctgatc gattacgaca ctctgccgta tggcgaccag
    17521 gtaggtaatc agtaattatc agccaggcgc tatttgccgg atgcgacgct tgacgcgtct
    17581 tatccggcct acagatcgcg gcggtaggct ggataaggcg tttacgccac atccggcaat
    17641 acaactgccg caatgtttac atcgaactcc cctcaggcca cacttttcag gtggcctttt
    17701 ttaataatgc cagttactgt tttcccgtct acatacctaa gggaataaca tgtatcacga
    17761 catcagctat ctgctctccc gcctgatcaa cggcccgctg tccctgcgcc agatttactt
    17821 tgccagcagt aacggcccgg tgcccgatct tgcgtatcag gtcgattttc cacggctgga
    17881 aattgtgctg gaaggtgagt ttgttgatac cggcgctgga gcaacgttag ttcccggcga
    17941 tgtgctgtac gttgccgctg gtggctggaa tttcccacaa tggaaaacac ccgctaccac
    18001 ctttagcgtg ctgtttggca aacagcaact cggcttcagc gtcgtgcaat gggatggcaa
    18061 acaatatcaa aatctggcga agcaacacgt cgcccgacgc ggcccacgta taggttcttt
    18121 tctgctacaa acgctcaatg aaatgcaaat gcagccgcag gagcagcaaa cggcaaggct
    18181 tatcgtagcc agcctgctta gccactgccg cgatttgctc ggcagccaaa tccagaccgc
    18241 ctcacgcagc caggcactat ttgaagctat tcgcgattat atcgacgaac gctatgcctc
    18301 cgcgcttacc cgcgaatctg tcgcacaggc attctatatt tcaccaaact atctctcgca
    18361 cctgtttcaa aaaacggggg ccattggttt taacgaatac ctgaatcaca cgcgactgga
    18421 gcacgctaag acgttattga aaggctatga cctgaaggta aaagaagtgg cgcacgcctg
    18481 cggctttgtc gacagcaact acttctgccg tctgtttcgt aaaaacaccg aacgctcgcc
    18541 gtcggaatat cgccgacagt accacagcca actgacagaa aaaccgacta ctccagaata
    18601 agatgggttt gctgcggcgc agaaagcact ttgcgcaccg cgctcattac ccgctgcggc
    18661 tcacgcagga atgcgtagat gctgcattgc acatagcggc aatgttcaaa tcgctcggca
    18721 ccggcaagct cgatatccgt aatcaacaga gcaacatccg cccgacggat atcctcgtcc
    18781 gctaaacgat tctccgttcc cagcgcgccc tgagtttcaa tgctgacgcc ccacttctct
    18841 aactggcaca acttttccag ccgttccgcc gccatataag tatgcgccac gccgcttacg
    18901 caggcggtta ctgccaccag gtatgccatt ttaacctccc acggtaacct gaaatccggc
    18961 ccgttctgcc atttcgcgca tcgttgccac atcggctgat gacggcgcag caacatcctt
    19021 catcgaccat gttttcccca gcaggcggta tttcggctcg ccgtactgat gaaacggcaa
    19081 cagatggatc tgcctgatat tcagcgggat cagcacgtcc agcgcctgct gcatattctc
    19141 ccggctgagt gtgaaaccgg ggatcagcgg caaacgcggg atcacgttga caccctcact
    19201 caccagcaaa cgcaggttct ccagtacgcg tggcaggttc atcttcacca catcccgcgc
    19261 ctgagtcgcg tccataattt ttaaatcgaa caacacttca tcgcacaatt tcgccagcgg
    19321 taacagcttg ctggctggtg cgtctccggc agtttcaatg gcacatgaga caccccacag
    19381 ccgcagtcgc tgtaaaaaac gggtagcaaa ctccgcctgc attaacactt cgccgccaga
    19441 aagcgtgacg ccgccgccgg acgtgcgaaa aaaaatgtca tctttcatca cttcccgttc
    19501 cagagcgtca aggctgatat cgcgaccaat ccgttcaaac gccccggagg ggcattcatc
    19561 cgcatcacgc aaacatttcg cacagtgcag acatttcgcc tctctgcgta ccgtctggat
    19621 tttgccggag atcgactccg gattagcaca ccacgggcaa agatgcggac agcctttaaa
    19681 aaagaccacc gtacgaatgc cctcgccgtc attcagtgaa taacgctgaa tgttgaaaat
    19741 gcgcgccaca tcattgaggc gcgtttccac aacgttacag ctgatgcgct gtccggcgga
    19801 tgatgtcatc ctggatctcc ttcgacagtt cgacaaagaa ggcgctgtat ccggcaacgc
    19861 gcaccaccag cccggcataa tcttgtgggc gctgttgcgc ttcccacaac gtgtcggcgt
    19921 tcaccacgtt aaactgaata tgctgcaact taagctgggt aaacgcccgt aagaagtcgg
    19981 ccagtttgcg taatcccgct tcaccttcca gggtcgccgg agtgaatttc acgttcagca
    20041 acgtaccgtt agacagcagc gtattatcga gcttactgac tgacttcagt accgctgttg
    20101 gcccttgttc gtcctggccc agcataggtg acaagccgcc gtctgccagc tgttctccgg
    20161 caaaacgacc gtctggcgtc gcgccaacca ccgatcccaa cgggacgtga gcagaaacgg
    20221 tatacgatcc cggcgtgaag taaccaccgc gcgggttctg gtatttttcc acttctttgc
    20281 agtagtggcg caacagttcg gcgctaatgt tatccacctc gtcgatatcg ttaccatatt
    20341 tctcaaagcg gttaattaag cgagcgcgga ctttttcgcc ttctggcgtt gcaaagttgg
    20401 cttttaatac cgacagcaat tcgtcaaaac ttaaacgctg ttgctcaaaa accatccctt
    20461 tcaacgcatg gagagaatcg ctcaggttgg cgataccgat cccctgtacg ccggagaagt
    20521 tataacgcgc gccgccatcg gtaatatcgc gacctttttc cagacaatcg ctgataaaag
    20581 acgagagcag cggtacaggt gcccagtcgc gatggccgat atcacaaata ttgctgccct
    20641 caaccatcag ggtgatgtag tggctgatct tggcgcggat ctgctccagt aaaccttcat
    20701 aagtcagcgc agcattgcct tcattttcat gcaggcagat ttccatcact ttcagcagat
    20761 taaacatcgc gatgtcatgc aagccgtagg ttctgccggg aatagataat tccacacagc
    20821 ccactacgga atagtcgcgc gcatcttcca gcgaaacgcc acggttgagg aacgctggta
    20881 ccaccacttc atcgttaaag atttgcggaa taccggtgcc gaggcgaatg gtttcggcgg
    20941 ttttcatcag gaatggcgtg tcgatcaagg cgttagtgcg cacgccgagg ttcggttgcg
    21001 gtaattgcac gctttgatag gcgtcaaggc aaaggaacga aagcacgttc accgcgctac
    21061 gtccgttctc ggttaacccg ccgagcagtg cggtatagcc ggtcgggaaa cctgcgaaat
    21121 aacgcgcgct gctggtggag cgcaacagca cgatgtcgtt gcatttcacc cataaagatt
    21181 cgagcagttc tttcaggaac gccggatctt cgcccggggt taaagatgcc tgatagaacg
    21241 gcaacatata ctggtcgaag cgccctaaag acagcgaact ggcgttggat tcgtattgca
    21301 gaatgatgtt catgtaccag aataactggc acgcctgcca gaacgtctgc ggcttatgtt
    21361 cggcgttatg gcgagagatc tccgcaatag tcagcagttc ttcgcgacgc tgggcatctg
    21421 tgcagtttgc cgccatcgtt tccgccagta cagcgtaacg caaaatgtgt ttctgcgagg
    21481 cttccagcag taacagcgct gcctgataaa agtgattctc cggctgttgc tgacaatgtt
    21541 gctgcatctg tgccaccaac tcccccagcc cgtgattcaa caggcgtggg taatcaataa
    21601 taatgtgccc ctggccttta tccgtctggt taatgctgaa aatctgcgtg ctggtcgcgg
    21661 cttttacttc atccgtcatc tgcccgttga tgaaatcttt catcgaacgt ttttcccagt
    21721 acgggaacaa ctcttcacga tagatacgtt tatcttcttc gctgatagca aagcggtcct
    21781 gcggacgcgt cgggaattga tccagctctt tcagcagcca gtaagggtcc atttccggcg
    21841 acataatccc ggcgcgcggt tttacggtgc ggttaccggc aatcagttct tcatcacgaa
    21901 tcgaaatttc aacatgttca aggatatacg ctgttgcttt cgcccggcgc aatatcaccg
    21961 gttcgccttc ggtttgccga tggctggcgg tataaagcag cgcccgctcc agcgagattt
    22021 cacgggtatt ggcaaacagt gcagttttga ggcgagagat acgattcgtc atgaggaact
    22081 cctgtgggaa agcgaacccg cccttgcgag cgggagaaga acttaagcgg tttgcgccag
    22141 gtgagcttca attttgctca taatggcgtc agcacgtttt actgcatcgc tgatgttgac
    22201 gcgcacgatg gtcttgccag caaaacgctc ttcaaacttg atgccgatat ctttggtcag
    22261 aatcaccata tcagcgctcg ccacatcttc cgcagtcagt tcattttcca gaccaattga
    22321 cccctgggtt tctactttca cttcccagcc tttcgctttc gcggcacttt ccagcgcctc
    22381 tgctgccata taggtatggg caacacctga aggacatgcg gttactgcaa taattttcgt
    22441 catggctcgt tcctcaatta attaatttca aaatccaaat ccaggtcgtc ttctttttca
    22501 tcagtcgaag acccattttt acgcgccaga cttttcagca cgttcacaca aacagccgtc
    22561 accactgctc cgacagccac tgctgcgata taacccagct tgccttcaac caccggcagc
    22621 acaatcagac caccccagcc tgcatagcac tgcgcaccga ccagcgccgc agttactgca
    22681 ccacaaactg aaccgaccat gatggaagga atgacacgca gcggatcggc agcggcgaaa
    22741 ggaatcgccc cttcagtaac gccaacacag cccatcacca gtgccgcttt gccggtttcg
    22801 cgctcttctg cggagaaatt tttacgacca atcagcgtcg ccagccccat ccccagcggc
    22861 gggatacaaa tacccacggc agcgatgacc accacggtat aaacaccctg agcaacgcaa
    22921 atcagcatga aggcataggc tactttgtta accggaccgc ccatatcgaa cgccagcatc
    22981 agacccatga tcaccgccag cataacaatg ctgccctgct gcatcccctg aagccactga
    23041 gtcaggctgt tggtcaacgc ccctacaggc tcgcccaagc cccacatcat gatgcctgcg
    23101 gtaatcagtg tgccgacgat aggaataatg aagataggca tcaccgagcg cagaacttta
    23161 tgcaccggaa ttttcttcag gtaatgcacc acgatgccgc cgataatccc ggcgatcagt
    23221 gcaccaaaga agcccgcacc aaagctgtta ccaacccagg caccgatagc gcacggagcc
    23281 agcgcagaac gctctgcaat ggagtaacca atgtaagcgg cgaggaaagg caccatcagc
    23341 gtcaaacctg caacgccgat atcaaacagt tttttcaaat tcggatcggc tacggcatcc
    23401 ggcactgcgc ctttgccata caacatgacg gaaaccgcca gcaaaatacc gcccgatacc
    23461 acgaagggaa tcatgtgtga aacgcccgtc attaaatgct gacgggtatt tttcaggatc
    23521 tgcaccaact cattcataag ctgctcccgg gcttgcgaaa gcccatgtcc atatttttga
    23581 tggaggaaac aataggcaat cgcaggcgga gcaaacagtg gataaaaagg ccatttactg
    23641 gacttttgta atatcagtac aaaaatgcga tccgcctcat aacttgcgat aaaccggaag
    23701 catgccgcaa aacggcgtct tgtgagacgc gtcgcaaatt gacggttaca ttacatttgt
    23761 ccagcttttg gcagatttgt cacatggcag gccgttgccg tgcgctctta tcctgtaaac
    23821 agaaaaccgt accgggagag aggcaatggc cctgattgtg gaatttattt gtgagctacc
    23881 taacggcgta catgcgcgtc cggcaagcca cgttgaaacg ctgtgtaata ctttttcatc
    23941 acaaattgag tggcataacc tgcgcactga ccgcaagggc aacgccaaaa gcgcccttgc
    24001 gctgattggc accgatacgc tggcgggcga taactgccag ttactgattt ccggggccga
    24061 cgaacaggaa gcgcaccagc gtttaagcca atggctgcgc gatgaattcc cccactgcga
    24121 tgcgccgctg gcggaagtta aatctgacga actggaacca ctgccggttt cactgaccaa
    24181 tctgaatccg caaattatcc gcgcccgcac cgtgtgcagc ggtagtgcag gcggcattct
    24241 gacgccgatc tcttctttag atctcaatgc gctgagtaat cttcccgcag ccaaagacgt
    24301 tgacgccgag caatccgcac tggaaaatgg cctgacgctg gtactgaaaa acattgagtt
    24361 tcgtctgctg gatagcgacg gtgctaccag ctcgatactg gaagctcacc gatccctggc
    24421 tggcgataca tctttacgtc agcacttact gacaggcgtc agcgagggat taagctgtgc
    24481 cgaagcgatt gtcgccagtg cgaatcactt ttgcgaagag ttcgcccgtt ccagcagcag
    24541 ctacctgcaa gaacgtgccc tggacgtacg cgacgtctgc ttccagttac tccagcaaat
    24601 ctacggtgag caacgcttcc cggcaccggg caaactgacg cagcccgcca tttgtatggc
    24661 tgatgaactg actcccagcc agttcctcga actggataaa aatcacctca aaggtctgtt
    24721 actgaaaagt ggcggcacca cctcacatac cgtaattctt gcccgttcgt tcaacattcc
    24781 gacactggtt ggtgtagata ttgatgccct tactccgtgg cagcatcaaa cgatttatat
    24841 cgacggcaac gccggggcga ttgtggttga gccaggggaa gccgtggccc gttattatca
    24901 gcaagaagcc cgcgtacagg acgcccttcg tgagcaacag cgtgtctggc tgacccaaca
    24961 agcccgtacc gctgacggta tccgcattga aattgccgct aacatcgctc actccgtgga
    25021 agcgcaggcc gcattcggca atggtgcgga aggcgttggt ttgttccgca ctgaaatgct
    25081 ctatatggat cgcaccagtg caccgggcga aagcgagctg tacaacattt tttgtcaggc
    25141 gctggagtct gccaacggac gcagcattat tgtgcgcact atggacattg gcggcgacaa
    25201 acccgttgat tatctgaaca ttccggcaga agctaacccg ttcctcggtt atcgcgctgt
    25261 gcgtatttat gaagaatacg cctcgctgtt caccacacaa ctacggtcga tcctgcgcgc
    25321 ctccgctcac ggcagcctga aaatcatgat cccgatgatc tcctcaatgg aagagatctt
    25381 atgggtgaaa gaaaaactgg cggaagccaa acagcaactg cgtaacgaac acattccgtt
    25441 tgatgagaag atccagcttg gcattatgct ggaagtaccg tcggtgatgt tcatcatcga
    25501 tcaatgctgc gaagagattg atttctttag tattggtagt aatgacctga cgcaatatct
    25561 gctggcagtg gatcgcgata acgctaaggt tactcgtcac tacaacagcc tgaatccggc
    25621 attcttgcgg gcgctcgatt acgccgtgca ggcggtgcat cgccagggca aatggattgg
    25681 tctgtgcggt gagctgggag cgaaaggttc cgtgctgccg ttgctggtcg gcttagggct
    25741 ggatgaactc agcatgagcg caccatcaat tccggcggcg aaagcgcgga tgacgcaact
    25801 tgatagccgt gagtgccgca agttgctcaa ccaggcaatg gcctgccgta cttcgctgga
    25861 agtggaacac ctgctggcgc aattccgcat gacccaacag gacgcaccgc tggtcaccgc
    25921 cgagtgcatc acgctggaaa gtgactggcg cagcaaagaa gaagtgctca aaggcatgac
    25981 cgataacctg ctgctggcgg gccgctgccg ctatccgcgt aaactggaag ccgacttatg
    26041 ggcgcgcgag gccgttttct ctaccggtct gggctttagt tttgccattc cacacagcaa
    26101 atcagaacac attgagcaat ccaccatcag cgtggcgcgt ctgcaagcgc cggtgcgctg
    26161 gggcgatgat gaagcgcaat tcatcattat gttaaccctg aacaaacacg ctgcgggcga
    26221 tcagcacatg cgcattttct ctcgcctcgc tcgccgcatc atgcacgaag aattccgtaa
    26281 cgcgctggtt aacgccgcct ctgccgacgc tatcgccagc ctgctgcaac atgaactgga
    26341 actgtaaaag gaaacatcat ggaactgtat ctggacaccg ctaacgtcgc agaagtcgaa
    26401 cgtctggcac gcatattccc cattgccggg gtgacaacta acccgagcat tatcgctgcc
    26461 agcaaggagt ccatctggga agttctgccg cgtctgcaaa aagcgattgg tgatgagggc
    26521 attctgtttg ctcagactat gagtcgtgac gcgcagggta tggtggaaga agcgaagcgc
    26581 ctgcgcgacg ccattccggg cattgtggtg aaaatcccgg tgacttccga aggtctggcc
    26641 gccattaaga tgctgaaaaa agagggtatt actacgcttg gcaccgcagt gtacagtgct
    26701 gcacaagggt tactggccgc gctggcaggg gcaaaatacg ttgctccgta tgttaaccgc
    26761 gtagatgccc agggcgggga cggcattcgt acggttcagg agctgcaagc gctgttagaa
    26821 atgcacgcac cagaaagcat ggtgctggcg gccagcttta aaacgccgcg tcaggcgctg
    26881 gactgtttac tggcaggatg tgaatccatc accctgccct tagatgtagc gcaacaaatg
    26941 ctcaacaccc ctgcggtaga gtcagctata gagaagttcg aacacgactg gaatgccgca
    27001 tttggcacta ctcatctcta aaggagcaat tatggaccgc attattcaat caccgggtaa
    27061 atacatccag ggcgctgatg tgattaatcg tctgggcgaa tacctgaagc cgctggcaga
    27121 acgctggtta gtggtgggtg acaaatttgt tttaggtttt gctcaatcca ctgtcgagaa
    27181 aagctttaaa gatgctggac tggtagtaga aattgcgccg tttggcggtg aatgttcgca
    27241 aaatgagatc gatcgtctgc gtggcatcgc ggagactgcg cagtgtggcg caattctcgg
    27301 tatcggtggc ggaaaaaccc tcgatactgc caaagcactg gcacatttca tgggtgttcc
    27361 ggtagcgatc gcaccgacta tcgcctctac cgatgcaccg tgcagcgcat tgtctgttat
    27421 ctacaccgat gagggtgagt ttgaccgcta tctactgttg ccaaataacc cgaatatggt
    27481 cattgtcgac accaaaatcg tcgctggcgc tcctgcacgt ctgttagcgg cgggtatcgg
    27541 cgatgcgctg gcaacctggt ttgaagcacg cgcctgttcc cgtagcggcg ctaccactat
    27601 ggcgggcggc aagtgcaccc aggcggcgct ggcactggca gaactgtgct acaacactct
    27661 gctggaagaa ggcgaaaaag cgatgcttgc cgccgaacag catgtagtaa cccctgcgct
    27721 ggaacgcgtg attgaagcga acacctattt aagcggtgtt ggttttgaaa gcggcggact
    27781 ggcggcggct catgcggtgc ataacggcct gaccgctatc ccggacgcgc atcactatta
    27841 tcacggtgaa aaagtggcat tcggtacgct gacgcagctg gtactggaaa acgcgccggt
    27901 tgaggaaatc gaaaccgtag ctgcatttag ccatgcggta ggtttgccaa taactctcgc
    27961 tcaactggat attaaagaag atgtcccggc gaaaatgcga attgtggcag aagcggcatg
    28021 tgcagaaggt gaaaccatcc acaacatgcc tggcggcgcg acgccagatc aggtttacgc
    28081 cactctgctg gtagccgacc agtacggtca gcgtttcctg caagagtggg aataacctac
    28141 tccaaactcc cggcttgtcc gggagtttga acgcaaaatt gcctgatgcg ctacgcttat
    28201 caggcctacg caatctctgc aatatattga atttgcgtgc tttttaggcc agataaggcg
    28261 ttcacgccgc atccggcact ctgtgccagt aatctgaaac tcctacgttg ttcaggagtt
    28321 ttttatccgc ttctggacat tttctctaca gaacaatcgt tagcccggaa ggtcgaatct
    28381 gtgactctta ttttcacgga cgaaccagat gaaagcttca ctggcgctgc tcagcctgct
    28441 aacggcattt accagccact ccttaaaatc tcccgccgtt ccaccaaccg tggtacaaat
    28501 ccaggccaat accaaccttg ccatcgcaga cggtgccaga cagcaaatcg gcaacacgct
    28561 attttacgat ccggcgtatg tgcggcttac ctatcctggc ggtgatgtcc cgcaagaacg
    28621 cggtgtatgt tccgatgtgg tgatccgtgc attgcgcagc cagaaggtcg atttgcagaa
    28681 actggttcac gaagatatgg cgaagaattt tgccgagtac ccgcaaaaat ggaagttaaa
    28741 gcgcccggac agcaacatcg atcaccgtcg ggtgcctaat ctggaaacct ggtttagccg
    28801 ccacaacaaa acacgcccca tcagtaaaaa tgccggtgac tatcaagcgg gcgatattgt
    28861 ctcctggcga ttagataacg ggctggcgca tattggggtg gtgtcagatg gcttcgcccg
    28921 cgacggtacg ccactggtga tacataacat tggcgcaggc gcgcaggaag aagatgtgct
    28981 gtttagctgg cggatggtgg ggcattatcg ttattttgtt aaataagcga tcgccccaca
    29041 tgaagaaaaa attcagatgc tttttacact gacagcttct tttttcttac ggctcaccag
    29101 cgccagtgcc agcacaatca gcacaatacc gctaccttca acggcccccg gattctcacc
    29161 gagcagccac caggaaaaga gtacgccgca aacgggaacg gccagcgtgc ttaagctggc
    29221 aatactggca ggcaagtttt tcaatacaaa caaccataag ctccacgcca gcgccgtcgc
    29281 cagaatcgca ctgtaggcca gcgcccagaa cacggtgggc tgccagtcaa tttcacgttg
    29341 cggcaccagt aaagcgacca cactcatcac cagcgccgca tagagcatct gccaggatgt
    29401 taacgataat aaatccacgc gcggatgacg ggtgtatagg cgtttagcaa caatcgcgct
    29461 cgccccccaa ctaacaccgg agaggattgc cagcatggca cttttcatcg aagagaaatc
    29521 gagttgccac ggctgcaaca ccaaaaataa gccgaaagcg gcaatcagaa tcgcgaaata
    29581 ttgcccacgt cgcaggcgtt caccgagaaa caacgcggcg aaaatcacca cccagaacgg
    29641 catggtatag ctcaggatcg ccaccttccc cgcacctccg ctgaccaacg cccactgcgc
    29701 cagaccaacc atcccgcagg tttgtaacag ggcaatggct aaggtgtatt taaacggcgt
    29761 cgggtgcatt ccgcgaccac gtaataaaag gacgatgaat aaaacgagag cgccgaaaat
    29821 gcagcgtaag gcggtaaagt cgaaggcacc gatgtaactg gtgacttgct tcatgaaaat
    29881 ccagctataa ctccagataa gtgtgagcac aaccaggcca ctgattgcca gtgggttgct
    29941 ctttcctgcg gcagacatga gagatccagt gtgtagtttt cctgtggaca ctatacgccg
    30001 gtaaagaaac ttcagcgact gcctgaaaga cagtcactga agaaggtcag attacagcag
    30061 gtcgaaacgg tcgaggttca tcactttcac ccatgccgct acgaagtctt taacaaactt
    30121 ctcgtgggca tcgctgctgg cgtaaacttc cgctaccgca cgcaggacag agttagaacc
    30181 aaataccaga tccgcacggc tggctgtgta tttcacttcg ccggtttcgc ggtcacgtcc
    30241 ttcgaacagc tctttcgatt cgtcagtcgc tttccactcg taacgcatat ccagcaagtt
    30301 cacgaagaag tcattgctca atacgccaac gcggtcagtg aagacgccgt ttttgctgct
    30361 atcgaagttg gcacccagta cacgcatccc gcccaccagc gcagtcattt ccggcgcggt
    30421 cagcgtcagt tgctgtgctt tgtcgatcag cagtgactcg gtggtggaaa cgtccagacg
    30481 agcgcgatag ttacggaaac cgtcagcaat tggctccagc agctcaaaca tctcaatgtc
    30541 agtctgatcc tgacgcgcat caacgcgacc cggcgcaaac ggtacatgaa tgctcaaacc
    30601 tgcggcgctt gcggctttct caacaccaac cacaccagcc agcacgatga tatccgccag
    30661 cgaggcttta ccagactctt tctggatttt ctccagaaca ggcagagcac gaacggctgc
    30721 ggcgttcaca tcccagtcgc gctgcggcat taatgccaga cgcgcaccgt tggcaccacc
    30781 gcgtttgtcg ccaccacgga aggtagaagc agatgcccag gccaccgata ccagctcact
    30841 aacagacaga ccagaatccg caatcgcgaa tttcagatcg ataatgtcct gctcggtcgg
    30901 gttgtagatc ggctgcggca gcggatcttg ccagatcaga tcttctttcg gcacttccgg
    30961 cccgatgtag cgagatttcg gccccatatc cctgtgcgtc agtttgaacc aggcacgggc
    31021 aaaggcttcg ttgaacgcct gcggatcgtt gaggaaacga cgagagatct tctcgaactc
    31081 aggatcaaaa cgcagcgtca ggtcggtcac cagcattgtc ggtttacgtt tcttcgacgg
    31141 atcgaacgga tccgggataa tttccggtgc gtctaccgct tcgaactgga ttgctccagc
    31201 cggactgcgg gtctgtaccc actcatattt gaacaggttc tcgaagaaat agttgctcca
    31261 ctgggtcggc gtctgggtcc agacaacttc cagaccagag gtaatggcat ctgcgccaac
    31321 gccgctgccg taagtgctcg cccagcctaa accttgttct tcaatcggtg cagcttctgg
    31381 atcaggacct acatttgatg tcggaccggc accgtgagtt ttacccagcg tatgaccacc
    31441 cgcaatcagc gccacggttt cttcgtcgtt catgcccatg ttgccgaagg tcgcacggat
    31501 agctgctgcc gcagaaagcg gttcgccgct gtgatccggg ccttccgggt taacgtaaat
    31561 cagacccatc tcggttgcac ccagcggtgc tttcgccagc gcttccggat gacggtgagt
    31621 cagccaggct ttttcatcac cccagttaac atccagatcc ggttcccaga cgtcttcacg
    31681 accggcacca aaaccgaagg tacggaagcc ggagttttcc agcgccacgt tacctgcgag
    31741 gataaacagg tcggcccagg agattttctg accatatttc tgtttgattg gccacaacag
    31801 gcgacgcgct ttatcaaggc ttacgttatc cggccaggag ttcagcggtg caaaacgttg
    31861 ctgaccacga cccgcgccgc cgcgtccatc gattgaacgg taagtacctg cgccgtgcca
    31921 ggccatacga ataaacagac cggcgtagct gccccagtcg gctggccacc acggctgaga
    31981 ttctgtcagc agggctttca gatctttttt caggccgtag taatctaatt tgctgaattc
    32041 tttgcggtag tcaaagtcct cacccagcgg gttagaacga ttagaatgtt ggtttaacag
    32101 gtcaacacgg agttgatttg gccaccagtc gcgagtggtt gtgcccgccc ccgcgctctg
    32161 gtcgtgaccg ccctgatgga acgggcattt gccagtggct gtcgtgttat ggatatcgtc
    32221 tgacgtgctc atcaatgtgc tcccctctac agtgttaccg ttacgataca cagcgttaga
    32281 gagaagttat aattgaatta atccacggat gcgatagttg agatcttaca tattgttggt
    32341 taaagagatg taggtcaaat tgatcgtaat taagcttttt tgattatgtc cgaattcgga
    32401 caaatgcttt ataaaaaagg ggtttagctt catatccttc aagtaatgag ggagaaaaca
    32461 aggctgacaa ccttattttc ccgccctcat ttcgaggcag cattttgtgc tctgtttaaa
    32521 atttgtgatc actgtgtgat tttcacaaaa gccacactat ttataaacca ggtcgaacac
    32581 ccagcgtatg gcaaatcgcg taactcattt cagcgcggtt aagcgtatag aagtggaaat
    32641 ctttcactcc ttcacggctt aaaatcttca ccatatccat ggcaatattc gcgcccacca
    32701 gtttgcgggt ttcggcatca tcatccaggc cgtcgaacat ttgcgccatc cacgccggaa
    32761 tacgcacgtt ggtcatatcg gcaaatttct tcgcctgttt aaagttagat accggcaaaa
    32821 ttcccggaat aatttccaca tcaatgcccg ccgatacaca gcggtcacga aaacgcaggt
    32881 agctttcgac atcgaagaag aactgagtaa tcgcgcggtt ggctccggca tcgactttgc
    32941 gtttcagatt aagcaaatcc gcctgagcgc tttttgcttc cgggtgaact tccggatacg
    33001 ccgccacgga gatatcgaaa tctgccactt cttttaatag cgtcaccagg tcagaagcat
    33061 acatttctgg cttaccactt cccggcggca gatcgccacg cagcgccacg atatgacgaa
    33121 taccgttatt ccagtagtcg cgtgcaatgg tgcgcaactc gtcgggcgtc gcatcaatgc
    33181 aagtaagatg cggtgccgct tccagaccag tgcgatcttt aatgccttta ataatgctgt
    33241 gcgtacggtc gcgctcgccg gagttcgcgc cataggtcac cgatacaaac ttcggtttca
    33301 ggctgctaag gcgatcgatg gagttccaca gggtctgctc catttcactg gtacgcggcg
    33361 ggaaaaactc gaacgaaacg ttaatctgcc cctggacttc tgccaggcgc tgattcaggg
    33421 catcccgctg gctggcgtga aaaaagctca taccttacct catcaatcgc ttgtagttat
    33481 atgttgtgtt gtgcacatct atccgtttag acgtccagat gtaaagatga aggaaaagcc
    33541 gaagggcgtc aaccgaaaaa tgaccaatga tggtgaggaa aaatcaggga agatgaaaaa
    33601 acttcaggat ggtaagaaaa agaaaatccg gtatgcaaag caaaccggac tgcaaatata
    33661 aactaaccat gtacttattg cttcttgccg gattcgtcgt aaacgcttaa tccggcctaa
    33721 tcctatgata attcaatata tttcattaga aaccataaac ccgaaaacat gagtaccggg
    33781 cattattaaa tttctgaaat tacaacaact gtgccagccg gttgatatcc gactgaatcg
    33841 ccccggcggt gacgtcgcgc cccgcgccag gcccacggat caccagcggg ttgtcgcgat
    33901 accagcggct ttcgatggca aagacgttat cgcacggcag cagtgatgcc agcggatggt
    33961 cttcacgcac cgcctccacg cccacacgcg ctttgccgtt ggcatcgaaa cgcgccacgt
    34021 agcgcagcac cagccccatt tcgcgggccg cttccagccg ttgcaccatc tgctcgttaa
    34081 gttcatcgcc attttcaaag aaatggtcga tgctgccgcc ttcgcaatga gcaggcacca
    34141 gcgattccac acgtacctgg tccggttcaa tgttgtaacc cgcttcacgc gccagaatta
    34201 ccagcttgcg cattacgtct ttgccggaga ggtcgtcacg cggatcaggc tcggttaagc
    34261 cctgctgcca cgcctgatcc accagctcgg taaacggcac gctaccgtcg aattgcagga
    34321 acagccagga gagcgtgccg gagaagatcc cgctgatcga caaaatagta tcgccgctgt
    34381 cgatcagatc gcgcacggtg tggttgatcg gcaagcccgc accgacggtg gcattgtaca
    34441 gccagtgacg cccggttttt tcgaaggcgt cgtggatctg gcgatattta ttgctgtcgc
    34501 tggctcccgc cagtttgttg gcgctgataa cgtggaaacc gtggctggcg aaatcaagat
    34561 actgatcagc aagctgctgg ctggcggtaa cgtccagcac cactaaatca tcatacggat
    34621 gggcgcgcat ccacaggaac aacgactctt catcctgctc aaccgcttca tcgttgaaga
    34681 aggctaacgc gcggctggcg tccagcccgt catagctcaa caggctacgg cggctgtcca
    34741 ccacacctgc cagcacaaac tcaaagccgg tacgtgccga aagcgtgctc tgctcacggg
    34801 cgaacagttc cagccaacgg gaaccgatat tgcccttacc gaacaatacc aggccgatgc
    34861 gtttttctgc gcggaagacg gactgatgca gcccctgaat caggctttcg gtcgggccgg
    34921 tgcgcagtac tgccaccagg ctgatgccgt catcggactg ccaggtaaat tcgaccggct
    34981 ggcctttcag ttgctgccag aagcggtggc aatgcagcgg gttacgggtg acgcctgcac
    35041 cgaccatcgc caccagcgcc agcccctgac gcaggcgcag ttcgccaggt aatcccgctt
    35101 cgtcgaggat tttcagcgca ctgtcggcca cttctgaggt gtagcaaaat tgcagcaact
    35161 ggcgatcgtt atgtacgcca accgccagcg ggcgtacctg cgcgcgtttc aggatttggt
    35221 cgatctcttt atgcgccagt ttgaaatcct gactggcggg cacctgaaac tcaatcaaac
    35281 agacatcatc gtggctggtg acaatacgcg caccagtacc ggaggccagc acgcgttcaa
    35341 tgcgcgtgga accttgatcc ggcgtgtagc tacagcgcag ttgcaggtcg atttcgctgc
    35401 cagaaaccgg ctgtaaagta cgggcgtgaa gaacgggagc cgccaggcgc gccagttcgc
    35461 tggcctcatc cagacgcagc aacggcagca ggcaggcatc tttcacttta cgcgggtcgg
    35521 cactgtatac cccggcgacg tcgctccaga tggttacgcg agaaacaccc gccagcgcac
    35581 cgatttgtgt cgcggaatag tcggaaccgt tacgccccag cagcaccgtt tcaccggcgt
    35641 tgttgcggct gataaatccg gtcaccacca gacgtttgcc cggatgttgc accagcagct
    35701 gttgcagcaa cgggtaagaa agcccttcat caacctgcgg ttgtgcggcg cgttcagcgc
    35761 gtaaaaactc gcgggcatca agccaggccg ctggcagccc ttgttgatta agtaccgcag
    35821 acatcaggcg tgccgaccat acttccccgt ggcccaccac ttccgcatac actgcgtcgt
    35881 taataccgct gtcgagcagc gccgccaggc gctcaaggtc gctgacaaaa gcgctaatga
    35941 ggctatcagc ttcttcagcg ggtagcagac cgctaatcag atcgcactga tagcgacgca
    36001 gcgtttgttg aacctgatgc gcagagagac gatcggtctg gcttagtttc aaccagttaa
    36061 tcaactggtt agtggtgcta ccggcggcgg aaaccaccat catatcgtca ggctgagagt
    36121 actccgccat aatgcccgca acacgcaaat aacacttcac atcagccaga ctactgccac
    36181 caaatttatg cagttgacga cctttcgccc ctgcctgcgc aatcacactc atttttaccc
    36241 cttgtttgca gcccggaagc cattttccag gtcggcaatt aaatcttcgc catcttcaat
    36301 accggtggag atacgcagca gcgtctcgga gatcccggcg gcagcacgcg cttctggtgc
    36361 catgcctgca tgtgtcatgg ttgcggcgtg agagattaaa ctttccactc cccctaatga
    36421 ttccgccagc gtaaacaacg acagcccgcc caggaaacga cgcagcgtct gctcatcgcc
    36481 atccagttca aaactcaaca ttgcgccaaa gcctttttgc tggcgcgcgg caatttcatg
    36541 cccctgattt tccggcagcg acgggtgata cagttttttc accaacggct gggtttgcag
    36601 atatttcaca atcgcctgcg cgttgcgctg ggccagctcc atacgcggca ccagcgttcg
    36661 caacccgcgt agcagcagat agctgtcaaa cgcgccgccc gtcacgccaa tattgtttgt
    36721 ccaccaggca agttcagtga caacgtccgg gtctttagca atcaccacgc cagccaccac
    36781 gtcagagtga ccgttcagat atttcgtaca tgaatgcaac accagatcgg cacccaatgc
    36841 cagcggattt tgtaatgccg ggcttaagaa ggtgttatcc accacgctca ccgccccgac
    36901 ttcccttgcc agatggcaga ttttcgcaat atccacgacg cgtaacaatg gattacttgg
    36961 gctttctacc agtaccagtt taggtttttc tgccagcgct gcccgtaatg cctgttcatc
    37021 gccttgatca acaaacaaca cgcgatagca accgcgtttc gccagactgt cgaacaggcg
    37081 atagctaccg ccgtagcagt cgtgcggcgc aaccagcaga tcgccaggtt tcaaaaagac
    37141 ggtcgttacc aagtgaatcg cggacatgcc ggtattagta agtactgcgc cagcaccgcc
    37201 ttccagttct gccagcgcac gctgaaccac atcgcgcgtt gggttgccgc gacgtgagta
    37261 atcatgcgcg cgcggttcat taaatccggt aaagttatag gtgctggaaa gatggatggg
    37321 agggacaacg caaccatact gttcgtcgtc atttaacccg ctacgcactg cgatggtggc
    37381 ctgtttacgc gtcatgtgat gaagtttcct gggctttgtc ggtgaaatgt caggcaccag
    37441 agtaaacatt gtgttaatgg acgtcaatac atctggacat ctaaacttct ttacgtatag
    37501 attgagcaaa tcccaaatag ccgttaaaat tatatgcatt atcacgccga caggtgcatt
    37561 acacgatgtc acggtaacgc ctgtacggta aactatgcgg gtttacggtc agtacccaca
    37621 taaattgtgt ggtctggtct caatttattg acgaagagga ttaagtatct catggctgaa
    37681 tggagcggcg aatatatcag cccatacgct gagcacggca agaagagtga acaagtcaaa
    37741 aagattacgg tttccattcc tcttaaggtg ttaaaaatcc tcaccgatga acgcacgcgt
    37801 cgtcaggtga acaacctgcg tcacgctacc aacagcgagc tgctgtgcga agcgtttctg
    37861 catgccttta ccgggcaacc tttgccggat gatgccgatc tgcgtaaaga gcgcagcgac
    37921 gaaatcccgg aagcggcaaa agagatcatg cgtgagatgg ggattaaccc ggagacgtgg
    37981 gaatactaaa gcaaaaaaga gcggcgcgga gtggaatcgc ctgatgcgct acgcttatca
    38041 ggcctacgtc atattgcaat ttattgaatt tgcacgaact tgtaggccgg ataaggcgtt
    38101 cacgccgcat ccggcataaa caacgagcac gttgtctgcg acccaccgct ttttatacat
    38161 ggacgtttaa ctatgaaaaa caggctgctg atcctcagcc tgctggtttc tgtacctgcc
    38221 tttgcctggc agccacaaac cggcgacatc atctttcaga tctctcgctc atcgcaaagt
    38281 aaagcgatcc aactggcgac ccattccgat tatagccaca ccggtatgct ggtgatacgc
    38341 aacaaaaagc cctacgtttt tgaagcggtc ggcccggtga aatacacccc gctcaagcag
    38401 tggatcgccc atggtgaaaa gggcaaatac gttgttcgcc gcgttgaagg cggactgagt
    38461 gttgaacaac agcaaaaact ggcgcaaacg gtaaaacgtt atctcggtaa accgtatgat
    38521 ttcagcttct catggagcga cgatcgccag tactgttcgg aagtggtgtg gaaggtttac
    38581 cagaacgcgc tgggaatgcg cgtgggcgag cagcagaagt tgaaagagtt cgatctcagc
    38641 aacccgctgg tccaggctaa gctcaaagaa cgctacggca aaaatattcc gcttgaggaa
    38701 acggtagttt caccacaagc cgttttcgac gcgccacaac tcaccacggt tgccaaagag
    38761 tggccgctgt tttcgtggta atggatgatg aaaaaaataa ttcccgccgt agtctgtttg
    38821 ttgctttgta gttgcacgac ctttccgcaa actgtcgctc cggtaaacgg tgatgcctcc
    38881 aattagttga attaaggata taatactcgc ttttaaggtt gtttcatggt cacagttaac
    38941 cttcattgcc cccgttgcca gtccgttcag gtttaccgtc acgggcagaa cccaaaaaga
    39001 catgatcgat tccgcggccg tgactgtcac cgggtatttc agctcagtta ctgttacgag
    39061 ccccgtaaac cgggagttaa agaccaaatc gctgaaatga ctttcaacgg tgccggggtt
    39121 cgcgatactg cccgtacgct gaaaatcggc attaatacag tcatccgaac tttaaaaaac
    39181 tctcgccacg aagaataacg tcatccccgg tcgctcatgc tgatgtggca ctcatctgcg
    39241 aacttagtca gcaatggagc tttgtcggca gtaaagcgcg acagcactgg ctctggtacg
    39301 tgtacaacac gaaaactggt ggtgttctgg cctacacttt tggcccccgg actgacgaaa
    39361 cctgtcgtga attgctggcg ctgcttaccc ttttaccatc ggcatgttga ccactgacga
    39421 atggggtagt tacaccagag agttaccgaa ggaaaagcat ctgactggta agatttttac
    39481 tcagcgcatt gagcgcaaca atctgaccct gagaacccga atcaaacgtc tggcccgcag
    39541 aaccatctgt ttctcgcgct ctgtagaact tcatgaaaaa gtcatcggtg cttttatcga
    39601 aaatatatgt tctactaatt ggagtcatca cccttctgat gagctttcct tggatgatta
    39661 ccagactgaa tacacagcca aagattttta cctcattctg ctcttttttc tcaaatgaca
    39721 tatattatat tttacatcat attcataggc atatgacatt cccccgcccc cattatgtca
    39781 ttgtgggttg atgttgggct ttcataaaaa aaacatcttt ttttgaacta gcattaatta
    39841 tatttacttt atatattaaa atattttctc catctggaaa tattttagcc acacaatata
    39901 aagcagctga atccgaatta cttaaaaata tattatcatt acccataact ccagccatta
    39961 aattactgga gactaaagca aggaaataac aacattgtat tgccttcatt ttaattactc
    40021 ccttgtctga taattgtaac tccattccct ttagctttgg gattatattt tagataggtg
    40081 ttatttggtg ttcccaagta actacttgta ttcttttttt cccattccat tcatataaga
    40141 attcgttaaa tctttgcttg aaaaatttag actatcataa acatcatttt cttttgttac
    40201 tttatttcct ttatcgtcag agtaaaaacc gtgagtgtga taatcgccta ctctctctga
    40261 accttcaggg cattttatat ttcgcaagtc tacactatca ttatcatttg aacttatcgg
    40321 attcatgggg aaatattcac cttgcttctt acatattagt ccaccatatt ctttattctc
    40381 gttaattgat tctccattac acat
//
LOCUS       DADKRT010000011        40058 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.011, whole genome shotgun sequence.
ACCESSION   DADKRT010000011 DADKRT010000000
VERSION     DADKRT010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 40058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40058
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.011"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(457..2148)
                     /gene="fruA"
                     /locus_tag="JQ356_000512"
     CDS             complement(457..2148)
                     /gene="fruA"
                     /locus_tag="JQ356_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HAY4620701.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAVARKAKLEIIDNPNDAEMA
                     IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASG
                     PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
                     LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTE
                     GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
                     AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
                     TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
                     LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
                     ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
                     AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA"
     gene            complement(2165..3103)
                     /gene="fruK"
                     /locus_tag="JQ356_000513"
     CDS             complement(2165..3103)
                     /gene="fruK"
                     /locus_tag="JQ356_000513"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HAY4620702.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
                     HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            complement(3103..4233)
                     /locus_tag="JQ356_000514"
     CDS             complement(3103..4233)
                     /locus_tag="JQ356_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HAY4620703.1"
                     /translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
                     ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS
                     RAANAFAVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
                     SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
     gene            4601..5782
                     /gene="setB"
                     /locus_tag="JQ356_000515"
     CDS             4601..5782
                     /gene="setB"
                     /locus_tag="JQ356_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetB"
                     /protein_id="HAY4620704.1"
                     /translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
                     EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN
                     RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP
                     PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDT
                     LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
                     KRLGKRFLMRVAAVGGVCFYAGMLMAHSPAILLGLQLLNAIFIGILGGIGMLYFQDLM
                     PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRTKD
                     V"
     gene            complement(5779..6033)
                     /locus_tag="JQ356_000516"
     CDS             complement(5779..6033)
                     /locus_tag="JQ356_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HAY4620705.1"
                     /translation="MECRPGCGACCTAPSIFSPIPGMPDGKPANTPCIQLDEQQRCKI
                     FTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAS"
     gene            6188..6760
                     /gene="yeiP"
                     /locus_tag="JQ356_000517"
     CDS             6188..6760
                     /gene="yeiP"
                     /locus_tag="JQ356_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HAY4620706.1"
                     /translation="MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
     gene            6983..8449
                     /locus_tag="JQ356_000518"
     CDS             6983..8449
                     /locus_tag="JQ356_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HAY4620707.1"
                     /translation="MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT
                     DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN
                     AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS
                     APGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHV
                     SFPGTMVDRIVPAATDESLAEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVA
                     GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLNE
                     QAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMNGSQKLPQRMLAGIRIHLGRE
                     TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLRE
                     VFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI"
     gene            8567..9553
                     /locus_tag="JQ356_000519"
     CDS             8567..9553
                     /locus_tag="JQ356_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HAY4620708.1"
                     /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWTVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
                     SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA
                     ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE
                     GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
     gene            9592..10305
                     /gene="lpxT"
                     /locus_tag="JQ356_000520"
     CDS             9592..10305
                     /gene="lpxT"
                     /locus_tag="JQ356_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kdo(2)-lipid A phosphotransferase"
                     /protein_id="HAY4620709.1"
                     /translation="MIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQ
                     KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA
                     VVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
                     MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
                     LITFFDKSLPGKNKHFQNK"
     gene            10717..11283
                     /gene="mepS"
                     /locus_tag="JQ356_000521"
     CDS             10717..11283
                     /gene="mepS"
                     /locus_tag="JQ356_000521"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HAY4620710.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
                     SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
                     REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
                     SSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            11464..13020
                     /locus_tag="JQ356_000522"
     CDS             11464..13020
                     /locus_tag="JQ356_000522"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY4620711.1"
                     /translation="MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
                     TLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
                     KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
                     VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
                     GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ
                     FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
                     IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
                     MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
                     ITSPVLDAMLTLAKRLNMLTVAEGGETPEQARWLSEPGVNFMQGYWISRPLPLDDFVR
                     WLKKPYTPQW"
     gene            13102..14916
                     /locus_tag="JQ356_000523"
     CDS             13102..14916
                     /locus_tag="JQ356_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY4620712.1"
                     /translation="MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFD
                     YVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
                     AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSW
                     KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
                     AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPV
                     SKGDGYDRDNLLKADTLLNEAGWVLKGQQRVNATTGQQLSFELLLPASSNSQWVLPFQ
                     HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRLWRAMPWPSSDLQISWSSEYINST
                     YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
                     WDKFSHPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE"
     gene            14917..16011
                     /locus_tag="JQ356_000524"
     CDS             14917..16011
                     /locus_tag="JQ356_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HAY4620713.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
                     YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
                     HNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
                     QKITDYLWHITLPVLATVIGGFAALTILTKNSFLDEVRKQYVVTARAKGVSEKNILWK
                     HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
                     YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
     gene            16011..17036
                     /locus_tag="JQ356_000525"
     CDS             16011..17036
                     /locus_tag="JQ356_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4620714.1"
                     /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
                     KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
                     TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
                     AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA
                     FDPNKAV"
     gene            17038..18627
                     /gene="yejF"
                     /locus_tag="JQ356_000526"
     CDS             17038..18627
                     /gene="yejF"
                     /locus_tag="JQ356_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HAY4620715.1"
                     /translation="MTQTLLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
                     GSGKSVTALSILRLLPSPPVEYLSGDIRFRGESLLHASDQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
                     IVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
                     DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
                     LINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
                     EPTSSLDKTVQAQILTLLKSLQQKLQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
                     PCARVFAAPQQEYTRQLLALS"
     gene            complement(18631..18975)
                     /locus_tag="JQ356_000527"
     CDS             complement(18631..18975)
                     /locus_tag="JQ356_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620716.1"
                     /translation="MTSLQLSIVHRLPQNFRWSAGFAGSKVEPIPQNGPCGDNSLVAL
                     KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNYNPF"
     gene            complement(19308..20491)
                     /gene="bcr"
                     /locus_tag="JQ356_000528"
                     /pseudo
     CDS             complement(19308..20491)
                     /gene="bcr"
                     /locus_tag="JQ356_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311101.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Bcr"
     gene            complement(20519..21214)
                     /gene="rsuA"
                     /locus_tag="JQ356_000529"
     CDS             complement(20519..21214)
                     /gene="rsuA"
                     /locus_tag="JQ356_000529"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HAY4620717.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
                     HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
                     TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
                     YRPLTEEEIASVV"
     gene            21363..23123
                     /locus_tag="JQ356_000530"
     CDS             21363..23123
                     /locus_tag="JQ356_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HAY4620718.1"
                     /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
                     ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
                     NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
                     IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
                     NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
                     AALITGDTPGAERDVLIEDFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY
                     QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
                     FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
                     CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
                     RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
                     VREKVFDYEGRFRRAHELRG"
     gene            23248..23532
                     /gene="rplY"
                     /locus_tag="JQ356_000531"
     CDS             23248..23532
                     /gene="rplY"
                     /locus_tag="JQ356_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HAY4620719.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
                     DKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
     gene            complement(23671..24678)
                     /gene="yejK"
                     /locus_tag="JQ356_000532"
     CDS             complement(23671..24678)
                     /gene="yejK"
                     /locus_tag="JQ356_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HAY4620720.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
                     RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
                     VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTKFAAEKGYELEESFPADR
                     STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     N"
     gene            24860..25087
                     /locus_tag="JQ356_000533"
     CDS             24860..25087
                     /locus_tag="JQ356_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HAY4620721.1"
                     /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
                     INTSIAPAQRQAIANSFARALQSSINEDKAH"
     gene            25107..26867
                     /gene="pbgA"
                     /locus_tag="JQ356_000534"
     CDS             25107..26867
                     /gene="pbgA"
                     /locus_tag="JQ356_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HAY4620722.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
                     TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
                     RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
                     NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRPQSDEQTATQWINWLGRYAQEDNR
                     WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALLDSGKLDNTVVIITAG
                     RGIPLSEDEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
                     ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
                     KPQLSLLLQVLTDEKRFIAN"
     gene            26942..27018
                     /locus_tag="JQ356_000535"
     tRNA            26942..27018
                     /locus_tag="JQ356_000535"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26976..26978,aa:Pro,seq:ggg)
     gene            27237..28478
                     /locus_tag="JQ356_000536"
     CDS             27237..28478
                     /locus_tag="JQ356_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000101912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4620723.1"
                     /translation="MARKTPPLTTVQIKAARPAEKEYTLQDGGGLFLLVKPSGSKLWR
                     FSYYRPSDKKRILLSFGSLDDVSLADARKRRSEYRALISAGTDPQGHEKKKREAEARR
                     QGNTFENVAAAWYQVKISQNLAPNTIKDIWRSLDKYVFPFIGNTPIDTLTARRFVEVL
                     TPIKERGNLETLKRVLQRVNEVMDYAANSGLIDANPAMNVRKAFPSPVKKHMPTIRPE
                     QLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEINLDAKQWTIPAGRMK
                     MRRDHVIPLSGQAMAVLEAMKPISHHRNYVFPSLKDPQQPMNSQTANAALRRMGFAGV
                     LVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRSNYIEKRIVLMRWWGE
                     FVEAAATGVTLASGKRGIRAV"
     gene            28974..29180
                     /locus_tag="JQ356_000537"
     CDS             28974..29180
                     /locus_tag="JQ356_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY4620724.1"
                     /translation="MEAIRKIIFRQEVKKIIHIKADSTLQSMINAGEFPQGFRVGLRR
                     RGWYEDDVLAWQKEREQEARGTAA"
     gene            29195..29860
                     /locus_tag="JQ356_000538"
     CDS             29195..29860
                     /locus_tag="JQ356_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001329530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620725.1"
                     /translation="MTNTKKAAPIWSRLSEQLTRCALCVYDPKHKHGDDSRYQAGGQC
                     NQSGSVRCHTCNERFSLYSLRNCSRAKAHGANLSDSCSIFLRRLFRAGDNVLVNSLSV
                     IVLSCIAMRRNTSHHGADSFYPLGSMPRRFSSVRPNSLSQLARLMPSLCASLSNCSFS
                     SGEIRILNCGDCPSPLGLLSRLIIDKWSPIELAFPLLGGHLNTRALKKAKPRKCHYHS
                     QGF"
     gene            29886..30086
                     /locus_tag="JQ356_000539"
     CDS             29886..30086
                     /locus_tag="JQ356_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HAY4620726.1"
                     /translation="MVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARS
                     RCPSGCVAVFAARIRQGETYAQ"
     gene            30076..30297
                     /locus_tag="JQ356_000540"
     CDS             30076..30297
                     /locus_tag="JQ356_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620727.1"
                     /translation="MHNKTTPNAAAAALTTLMHALIDIECTAELAQGEEQKDRTQFAL
                     ECIRYIATRSLNDAKNILVADCENGGGYA"
     gene            30290..30523
                     /locus_tag="JQ356_000541"
     CDS             30290..30523
                     /locus_tag="JQ356_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620728.1"
                     /translation="MRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYK
                     STGLDVLNIAADYAEYVAEARYRRKFPEDVSHA"
     gene            30516..30749
                     /locus_tag="JQ356_000542"
     CDS             30516..30749
                     /locus_tag="JQ356_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620729.1"
                     /translation="MRDIYHETIDRAFLALSHSENMLEILRIWLETLGDNERDKQKSR
                     IATALITLLEPVIMELQEIDLLHDRYKEQHTGE"
     gene            30755..31054
                     /locus_tag="JQ356_000543"
     CDS             30755..31054
                     /locus_tag="JQ356_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HAY4620730.1"
                     /translation="MKLKYSGLTASGNTHPKFTRGDIYRDQYGGTVMIKGVEERRVTY
                     RREGYEYDCVMPVYQFRRDFSLVQTAPHNVPTSNARARANIQKLKTMINGFRGKK"
     gene            31051..32451
                     /locus_tag="JQ356_000544"
                     /pseudo
     CDS             31051..32451
                     /locus_tag="JQ356_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000833619.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            32651..32902
                     /locus_tag="JQ356_000545"
     CDS             32651..32902
                     /locus_tag="JQ356_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620731.1"
                     /translation="MTQKRRDRTEPKYKALDMTEHTLKVAIRTIDRHTREGYAKEHPD
                     LISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEVEL"
     gene            32899..33309
                     /locus_tag="JQ356_000546"
     CDS             32899..33309
                     /locus_tag="JQ356_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY4620732.1"
                     /translation="MTAQIAAYGRLVDDPQVKQTSKGTPMTLARMAVSLPCSQAQDGQ
                     ATLWLSVIAFGKQADFLAKHQKGDVASVSGTMQVSQWTGQNGETRQGWQVIADSVISA
                     RAARPGGNRRKTTGTQGNQPPAGGDDPYGDDISF"
     gene            33320..33592
                     /locus_tag="JQ356_000547"
     CDS             33320..33592
                     /locus_tag="JQ356_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
                     /protein_id="HAY4620733.1"
                     /translation="MVHDRIAEELEAKGFYRRAAARWGEVMQLVETDKERHHITMRRL
                     ECSRKAQRAPEPPDNFGDLKKAVDRTYAEMGIDGAGDEIWRNYQDS"
     gene            33831..34037
                     /locus_tag="JQ356_000548"
     CDS             33831..34037
                     /locus_tag="JQ356_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000796968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620734.1"
                     /translation="MAEEKKGGVSVYISPEIVEVLKQRHKKNYEAGVAAGLDPLMTPE
                     PSIGSLVRSYLLAALGMHKNYGGE"
     gene            34037..35092
                     /locus_tag="JQ356_000549"
     CDS             34037..35092
                     /locus_tag="JQ356_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HAY4620735.1"
                     /translation="MAGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFST
                     QNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETSTIKPGYMKPKHEIDPTKTIMRM
                     AGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYE
                     IDWKIPEKNIIEQSDGKKWSEHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLR
                     SFKKFRELYDLSRGSESAAEMACKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYF
                     LEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMYYPKNWIEDGDPAIEYVQTHSA
                     PQPVPADIRKFVTVKIG"
     gene            35104..35439
                     /locus_tag="JQ356_000550"
     CDS             35104..35439
                     /locus_tag="JQ356_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HAY4620736.1"
                     /translation="MDTPYIELFAGSQQVSTTLVHFAADAGVIQEFTPLMLVDNGEFK
                     PWDGQESGKAVYLTSYLVDTSKQKSAQCYKTGIFNIAAVNWPESVDTDAKKCAAFAGS
                     GVSVQPLAR"
     gene            35452..35865
                     /locus_tag="JQ356_000551"
     CDS             35452..35865
                     /locus_tag="JQ356_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HAY4620737.1"
                     /translation="MATNESIMALPLASKFKAEARAMADRGLSTYEAVYQLNKLEEQD
                     KPRADAIMALHEHKDYQPLLRAMANVPCIDVDTAKNILNMTIEQERPKVAPELTAAFE
                     NFMDMHSPQTVSAGMAYDGRNPGDDGDIDRILKTI"
     gene            36027..36461
                     /locus_tag="JQ356_000552"
     CDS             36027..36461
                     /locus_tag="JQ356_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620738.1"
                     /translation="MIDKACFVSQQEIAEHFKVNRTTIRAWTKQGMPYLNADRGKSGG
                     YHIGHTLLWSSGKSRLEAIRYHVETSALEKIMFARLLSSERDEYSSEETEHRFDEGLQ
                     IYGYSPEDVSKARNKMAGFLAGWRHAVSVRRASMEQSADTEQ"
     gene            36742..37023
                     /locus_tag="JQ356_000553"
     CDS             36742..37023
                     /locus_tag="JQ356_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620739.1"
                     /translation="MTEAEILGLIRRAGGISQQTDEQATQPDSVTAENYARVVAEVMR
                     RDGIQLNDVDMRNIRIRVLEMLAYNRRVALYRETEKITYHWKKPERLRR"
     gene            complement(37702..>40058)
                     /gene="yejO"
                     /locus_tag="JQ356_000554"
     CDS             complement(37702..>40058)
                     /gene="yejO"
                     /locus_tag="JQ356_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311108.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter YejO"
                     /protein_id="HAY4620740.1"
                     /translation="GGYQYIEMNGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYG
                     AANDPTIKGGRLIVEKDGITVLAAIEKGGLLEVKEGGLAIAVDQKAGGAIKASTRVME
                     AFGTNRLGQFEIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATGV
                     DKKAGGKLIVSTNALEVSGTNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILD
                     EHATMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGRANVWAGTM
                     VNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSVW
                     AIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGNG
                     NFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLG
                     NAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVR
                     ERLGSVKSVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIR
                     GLFFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMS
                     NGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVG
                     NTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNHVKVNDDGKFNNDVAGT
                     PGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF"
BASE COUNT        10081 a        10188 c        10018 g         9771 t
ORIGIN      
        1 agcctataat tacgacataa tccttttcgc gcatagcaca tcctctggta aaaaattacc
       61 aaccctgtca atccacaaga atatagatac tgcaaagacg gtttaaacat gtgttcatat
      121 ttaaacatgt gctcatagca tgcatgtttt acgtaaagta aattaccgcc agagaggcaa
      181 aatgggcaga tttgagcagg ctcacaaaat gcgattaaat gcctgaatta caaaagcgag
      241 gaatttgtga cgggatgcac agaacgggaa caataaaaaa ggcagaaaat aatctgccct
      301 tgaggaaata accttagtgt ttgatgaacg tttcaagttt ctactgaaag ataaaaccat
      361 ttaaattcat aaaattacat tcacaaaccg gtcattctct ttgcgctcat caaatgttac
      421 agggcaggaa atttctgccc tgtaacacac cttttattac gctgctttcg ctactgcgtc
      481 cacttccgga cgtttcagga aggcataggc caaacccgcc accagcgtac cggcaataat
      541 tgctaccagg taacccagta ccggcgtaat agcgccaggg atcagcagaa caaacagacc
      601 accgtgcggt gccatcagtt tcgcaccaat cgccattgag attgcgccag tcagcgcccc
      661 acccacgata cagcacggca gcacacgcat cggatcacga gcagcaaacg gaattgcacc
      721 ttccgaaatg aagcacagtc ccaataccag agcggctttg ccaccttcct gctgcgcttt
      781 gtcgaatttg cgacgcgcca ccattgttgc cagacccatt gccagcggtg gcaccatacc
      841 tgccgccata atcgccgcca tcgggccata ggtttgagta ctcagcagac ccacaccgaa
      901 tgcgtacgct gctttgttta ccggaccgcc catgtcagta cacatcatgc caccgaggat
      961 cgcccccagc agaaccgcat tcgcagtccc catggtctgc agccagtgag tcagcccttc
     1021 gagaatgcca gcaactggtt taccgatcag gtagatcatc gccagaccga ccaccagact
     1081 ggaaattagc ggaatgatca ggatcggttt cagcgcctcc atactctgtg gcagtttcag
     1141 ttgcgtactg attaacttcg caatgtaacc agccaggaag ccagcaatta taccgccaat
     1201 aaagccagaa ccggtgctga ccgccagcat accgccaatc agacccggcg tgaggcccgg
     1261 acgatcggca atggagaagg caatataacc tgccagtacc ggcaccatca gcgcaaaggc
     1321 tgaaccaccg ccaatctgca tcagcgccgc tgccaacgta cccggctctt taaacgcttc
     1381 gataccaaaa gcaaaagaaa gcgcgataca cagaccacct gcgacgacca tcggcagcat
     1441 ataagagacg cctgtcagca agtgacggta agcgcctgca ctctctttct taccttcagt
     1501 ggtcgccgtt tgagctttgc ccgccggttc atacggcgtt gcttcagcaa ccgctttatc
     1561 cagttcctgc gcggttttct tcagcgccag accggtagag gtacgataca tcggtttacc
     1621 agcaaatttc gccagatcca cttcgatatc tgccgccaca atcaccagat ccgctgctgc
     1681 gacttcttca ggggtgattg cattgcccgc gccaacagaa ccacgggttt caactttcac
     1741 ccaccagcca cgttttttcg cttcggtttc aatggcttca gccgccataa aggtgtgtgc
     1801 tacgccagtc gggcaagcag tcaccgcaac tacgcgtttc ggaccgctgg cagcaaccgg
     1861 tgctgtcgca gcgaccggcg cagtgtaagg tttcgcatgg cctttggctt cactcaggaa
     1921 cagctcaggg tgcgcaactg cccgggaaat atcacccagc cagacatttt taccgttcag
     1981 cgcgctgtca ttcgggatgg aatcaccgag aacaatcgcc atttctgcgt cgttcggatt
     2041 gtcgatgatt tccagttttg cttttcgcgc caccgcgccc agcagggtct tcgccatata
     2101 ggcgcgtgcc tgaccgagat tagcgtcaat aatcagcagc gttttcatta tgcctctcct
     2161 gctgtcagtt aaaaggttgt aagtcgacgc gcgccatcat tgcggccaac tgcggacgat
     2221 cggtaatacc cacattgctt tgacttaccg ccagggctgc aacagctgtc gccagacgca
     2281 gtgtgtgttc actggattca cgcatcagca agccataaat caggccacca accatagaat
     2341 cccctgcgcc aacggtgctt acgacatcga ctgacggtgg tttggcgatc cattcgccgg
     2401 aggcattaac ccaaagcgcg ccttcggcac ccagtgaaat aacaacatgc gcaatacctt
     2461 gttcacgtag cgcatgtgca gcttcaatca catctttcat ttcaggcagt ttacggcctg
     2521 cccaaatttc caactcgcgg cggttaggtt tcaccagcca cggtgccgct ttcaaacctg
     2581 ctactaacgc ttcacggcta ctatcaaaga taatgcaagg acactgacta cgcaggcgag
     2641 tcatccagtc ggtgaacgct tccgggctga cgcctgacgg taagcttccg ctgacacaga
     2701 ccatatcgaa ctgaccgagc cagctcagag aatcagtcac aaagcgttcc cagtcggcgg
     2761 gggtgacttc aaaacccgag aagttgaagt cggtcacttc gccgtctttt tccgtcagct
     2821 taacgttaat tcgggtgcgc ccctgtacaa cctggaaacg gttggcaatg cccagctcgc
     2881 tgaacagttg ctgaaaacca tcctgattgt ctttacccag gaagccgcca acggtgacat
     2941 caattcccag gtcttttaat actttggcca cgttgatgcc tttacccgcc gcatgcagac
     3001 cggtggtttt caccaggttc acttcgccgc gttcaatttc cgggcagaaa ccaacaaggt
     3061 cataagccgg attaagggtg atcgtagcaa cacgtctgct cattatgcgc cctccccaag
     3121 accagcagcg atagcgtcgc caatggcttt cagcgcctgt tcagcatctg caccctgggc
     3181 ggtaaagcgt aggcgatgac ctttcttaac gccaagtgcc acaactttca tcagactacg
     3241 tccgtttgcc ggtttgccgg tgccatcaag gtttgtcacg gtaatatcac tgttaaattg
     3301 tttaatggta ttgaccagca tggtacctgg acgagcatgc aggccgtgtt cattgcgcac
     3361 cacaaactcc gcgcttaaca cgtcgtcggt cggcgcatca tcgctggtca gcagcgccag
     3421 caacgttgcc gcatctgctt tcagcaagcg gtcagcttta ttgtcgagca ataaatcagc
     3481 gagacgctta agaaccgcga tgggctgatc gtcattcatc gccacactca ccagcatggc
     3541 tgccgtttcg ccgtccacag caaaagcatt tgccgcacgg cttaccgcaa tcgcgctacg
     3601 cagattgcct tcggcgctat cgctcagcca gataccctgt ccgagattca gcggttgttc
     3661 attgatggct ttggtgacga aagtggcgtc aactgccccc gcctctttca gacgcgcagc
     3721 gttcagcgcc tgaagagtca gcagatcgct ggcgacgata tccagcgtca gcatttcgtt
     3781 gtcgagcttc agctgctcac tctgcttttc gcccatcagt aatgcgcgaa gttcttctgc
     3841 tgttgttgct gacttcagtt gttcagcaac ggaatcatcg ctcagtacgt gggtcagctg
     3901 gcgtagcagg cccagatgtt catccgagct ggcagcaata ccgattgcca cgtacgctac
     3961 ctgaccgtca ccccaggtga cgccttccgg gaactgaaat acctgaacgc cggttttcag
     4021 cacctgatcg cgggtgtcgg tagtgccgtg tggaatagca ataccattgc cgaggaacgt
     4081 tgaggtttgc tgttcgcgcg ccagcatgcc attgacgtag ccttctgcta cattaccggc
     4141 ctgcaccagc gccgcagcga cctggcgaat cgcctcttct ttgtctccgg ccttttcgcc
     4201 cggatggatg tcctgtacgg ataactggaa catagttctc ctctcttgct gaattgaaac
     4261 gattcagcct ctatgagaaa aaaagcgcca acctggctta gggttaaaga caagatcgcg
     4321 ctgaaacgtt tcaagaaagc ataatacttc tgtttcagca cgcaaggaaa gccgtaaagt
     4381 tatgagcaaa agtttgatgt gctgcacatt tttttgtcat ttttcctaat tgctgatggg
     4441 aaaatccgtt atcagcaatt tcatttcagc agcgtcagca gccaatcagc aacagtgaaa
     4501 tggcattttg attattcgtg gcgcttttga tttcgctgtc tgtttatttt ctgacaagca
     4561 gcgtaaactc cgcgtcttcc tcttccagtg atagacctgc atgcataact cccccgcagt
     4621 ctccagcgcg aaatcgtttg acctgacctc gacggcgttt ttaatcgttg cctttctcac
     4681 cggtattgcg ggtgctctgc aaaccccgac actcagtatt ttccttaccg atgaagtaca
     4741 tgcccgtccg gcgatggtgg gattcttctt taccggcagc gctgtcattg ggattctggt
     4801 aagtcagttt ctcgctgggc gctctgataa gcgcggcgat cgcaaatcgc tgattgtctt
     4861 ttgctgcctg ttaggcgtgc tggcctgcac cctttttgcc tggaatcgca actactttgt
     4921 tttgctattc gttggcgtct ttcttagcag ctttggctcg accgctaacc cgcaaatgtt
     4981 tgcccttgcc cgtgaacatg ccgacaaaac cggacgtgag gcggtgatgt tcagctcttt
     5041 tttacgcgct caggtttcac tggcatgggt cattggccca ccgctggctt atgcgttagc
     5101 gatgggtttc agctttacgg taatgtatct gagcgcagcg gtagcgttta ttgtttgcgg
     5161 cgtgatggtg tggctgtttt taccgtcgat gcaaaaagag cttccgctgg cgaccggcac
     5221 ggttgaagcg ccgcgccgta accgtcgcga tacgctactg ctgtttgtca tttgtacatt
     5281 gatgtggggc tcgaacagcc tgtacatcat caacatgccg ctatttatta tcaacgaact
     5341 gcatcttccc gagaaactgg ccggtgtgat gatggggacc gccgccgggc tggaaatccc
     5401 gacgatgttg attgccggat atttcgccaa acgtctgggt aagcgtttct taatgcgcgt
     5461 tgctgccgtg ggtggcgtct gtttttacgc aggaatgctg atggcgcatt cacctgccat
     5521 tctgttgggc ttgcagctgc taaatgctat ttttattggc attctgggcg gcatcgggat
     5581 gctctatttt caggatttga tgcccggtca ggcaggttca gccaccacgc tctataccaa
     5641 cacgtcgcgc gtgggctgga tcatcgcagg atcagtggcg ggcatcgtcg ccgagatctg
     5701 gaattatcac gctgtgttct ggtttgcgat ggtgatgatt atcgccactc tgttttgctt
     5761 actgcggact aaagatgttt aagacgcggt cagcatttcc agatcgataa gccaggtcat
     5821 ggcctgctga cgcgagttac cgcacatttc agcgctggct tgtaagcctg cacagacttt
     5881 cggtcgcagt ggcgaggtga aaattttaca gcgttgctgt tcatcaagct gaatgcaggg
     5941 cgtattggcg ggcttgccat ctggcatacc gggaataggg ctgaaaattg aaggggcagt
     6001 gcaacacgcc ccgcaacccg gacggcattc catacgttgt tctcttaagg ttaaccaccg
     6061 gattgatgag cgcgcacagt accacctttt ttgcaccagc aaaagtgcga ataccacttg
     6121 cccgaaaggc ccgtcgcgag tactttgtcg cgatattttt gacattttcg actacaggaa
     6181 tttttcgatg ccaagagcga acgaaattaa aaaaggtatg gtactgaatt acaacggcaa
     6241 actgctgctg gttaaggata ttgatattca gtcgcccact gcccgcggtg ccgctacgct
     6301 gtacaaaatg cgtttttctg atgtccgtac cgggctgaaa gtagaagagc gtttcaaagg
     6361 tgatgatatc gttgacaccg tgacgctgac ccgccgttac gttgacttct cctatgtcga
     6421 tggcaacgaa tatgtcttta tggataaaga agactatacc ccgtatacct tcaccaaaga
     6481 tcagattgaa gaagagttgc tgtttatgcc agagggcggc atgccggaca tgcaggtgct
     6541 gacctgggac ggtcaactgc tggcgcttga gctgccgcag accgttgatc tggaaatcgt
     6601 tgaaaccgca ccaggcatca aaggggcatc tgccagcgcc cgtaacaaac cggcgacatt
     6661 gagcactggt ctggtgattc aggtaccaga atacttaagc ccgggcgaaa aaattcgtat
     6721 ccatatcgaa gaacgccgtt atatggggcg tgctgactaa cttcagccgc atgcagaaaa
     6781 gggatagctc aggctgcccc ttttttaatt tattatacca atcttctatt ttgcgcttcc
     6841 tgaacacctt acgccctcaa ttttcactcg ttgattgatc gccctcacac ttcatcgcat
     6901 taacaatcca gaccaatttc aattgctgtc atataacttt acactgtcat tgttaattta
     6961 tcgttactaa gacgtgactc ctatgaagac aattgcctcc gttacgctcc cgcatcatgt
     7021 acacgctcca cgctacgatc gccagcagtt gcaatcacgt atcgttcatt ttggctttgg
     7081 cgcctttcac cgcgctcatc aggcgttact gaccgatcgt gtgctgaatg cccagggcgg
     7141 cgactggggg atctgtgaaa tcagcttgtt cagcggtgat caactgatga gccagctccg
     7201 cgcacagaac catttatata ccgtgctgga gaaaggtgcg gacggcaatc aggtgataat
     7261 tgtcggtgcc gttcacgaat gccttaatgc aaaactggat tccttagcgg caattattga
     7321 gaaattttgc gagccacagg tggcaattgt ttccctgacg attaccgaaa aaggctattg
     7381 tattgacccg gccaccggtg cactcgacac cagtaatccg cggattattc acgatctaca
     7441 aacccctgaa gaacctcact ccgcaccggg tattctcgtc gaagcactga aacgccgccg
     7501 tgagcgcggc cttacaccgt ttaccgtgct ctcctgcgac aatattcccg acaatggcca
     7561 tgtggtgaaa aacgcggtgc tgggaatggc agaaaaacgt tcgccagaac tcgccgggtg
     7621 gataaaagaa cacgtcagtt ttccgggaac catggtcgac cgcattgttc cggctgcaac
     7681 cgacgaatca ctggcagaaa tcagccagca tctgggggta aatgatccct gcgcgattag
     7741 ctgcgaaccg tttatccagt gggtggtgga agataacttc gtcgctgggc gtcctgcctg
     7801 ggaagtcgca ggtgtacaaa tggtgaatga tgtcctgcca tgggaagaga tgaaactgcg
     7861 tatgcttaat ggcagccact cttttctcgc ttatctgggt tacctttcag gattcgccca
     7921 tatcagtgat tgcatgcagg atcgcgcatt tcgccatgcc gccagaacat taatgctgaa
     7981 tgagcaagcg ccgacactac aaattaaaga tgtcgattta acacaatatg cggacaagtt
     8041 aattgctcgt tttgctaatc cggcgctgaa acataagacc tggcaaatcg caatgaatgg
     8101 tagccagaaa ttaccgcaac gtatgctggc aggtattcgc atacatctgg ggcgcgaaac
     8161 ggactggtcg ttgctggcat taggcgttgc tggctggatg cgttacgtca gcggcgttga
     8221 tgatgccgga aatgccattg atgttcgcga tccgcttagc gataaaattc gcgaacttgt
     8281 tgcgggcagc agcagtgaac aacgcgtaac cgccctgctt tccctgcgtg aagttttcgg
     8341 tgatgatctg ccagataacc cgcattttgt gcaggccatc gaacaagcct ggcaacaaat
     8401 cgtacaattc ggcgcacatc aggcgctatt aaacaccctc aaaatttaac gatttctgcg
     8461 gttaaagcgg atgaagctca ccttcgtccg ctctcccctt ctcttttctg ccttttttag
     8521 ccaggattaa cgctcagtta acttaccaga gtattgcgga gccgttgtga ccaggaccaa
     8581 cctcatcacc ggttttctcg gcagcgggaa aaccacgtcg attcttcatc tgttagccca
     8641 taaagatccc aacgaaaaat ggacggtact ggttaatgaa tttggggaag tcggaattga
     8701 tggtgctttg ctcgccgata gcggcgcatt gctgaaagag atccccggcg gctgcatgtg
     8761 ctgcgttaat ggtttaccca tgcaggtagg gttgaatacc ttactgcgtc agggaaaacc
     8821 agaccgcttg ttgatagagc cgaccgggct gggccatccg aaacagatcc tcgatctgtt
     8881 aaccgcacca gtctatgaac cgtggataga tctgcgcgcc accttgtgca ttctcgatcc
     8941 acgcttgctg ctggacgaaa aaagcgccag caatgaaaac ttccgtgacc agctggctgc
     9001 cgcagacatc attgtcgcca ataaatccga ccgtgcgacg cccgaaagtg agcaagcgct
     9061 acagcgttgg tggcagcaaa atggtggcga tcgacaatta attcacagtg agcatgggaa
     9121 agttgacggt catcttctgg atttgccgcg tcgcaattta gccgagttgc ccgccagcgc
     9181 cgcgcattct catcagcatg tcgtgaaaaa agggttagca gcgttaagcc tgccagagca
     9241 tcaacgctgg cgtcgcagtc tgaacagcgg gcaaggatat caggcctgcg gctggatatt
     9301 cgacgctgat acggtattcg acaccattgg cattctggaa tgggcgcgac ttgcaccggt
     9361 ggaacgcgtc aaaggcgtgc tgcgtattcc cgaagggctg gtacgaatca accgtcaggg
     9421 cgatgacctg cacattgaaa cgcaaaacgt tgcgccaccg gacagccgta ttgagctgat
     9481 ttccagcagc gaagctgact ggaatgcctt gcagagcgcg ctgttgaagc ttcgtttagc
     9541 gactaccgcg taaggttgcc tgcgtttttc agtaagataa ttagagaaaa tatgattaaa
     9601 aatttgccgc aaatagtgtt gttgaatatt gtcggcctcg cgctgtttct ttcctggtat
     9661 attcccgtta atcatggatt atggttgccg attgatgcgg atatttttta tttctttaat
     9721 cagaaactgg tcgaaagtaa ggccttttta tggctggttg cattgaccaa caatcgcgct
     9781 ttcgacggtt gttctctgct ggcgatggga atgttgatgc tgagtttctg gctgaaagaa
     9841 aacgccccag gcagacgacg tatcgtgatt attggtctgg taatgctatt aactgcagtg
     9901 gtattaaacc agctgggtca ggcattaatt cctgtaaaac gggccagccc aacattgacg
     9961 tttactaata ttaaccgcgt cagcgaactg ctctctgtcc ccacgaaaga tgcctcacga
    10021 gatagctttc ccggcgatca cggcatgatg ctgcttattt tttcggcatt catgtggcgt
    10081 tatttcggta aagttgcagg tcttatcgcc cttattattt ttgtggtttt tgcgtttccc
    10141 agagtaatga ttggcgcaca ctggtttact gacatcattg tcggttcgat gaccgtgata
    10201 ttgatcggtt tgccctgggt gttgctgacg ccattaagtg atcgattaat cacctttttt
    10261 gacaaatcac taccgggaaa aaacaaacat ttccaaaaca aataactcac agtaattaac
    10321 atcatcaggt ttatttttat agtgaggata atcctgatga tgcgcaccgt gctttcatct
    10381 atcgaacgca aaaatcattc tctaagtaaa tgaatggatt gcatgcgttt cactcaatcg
    10441 tactttaatt gaccaatccc gcttattaac tttctgtatc actttttctt ataaaaaatc
    10501 atgtaaaacc gctcgccaag accgcaccaa tcgggtaatc tcgaactcgt tttgcctcgg
    10561 cggtagatta tcctcacagc atataatttt gtgcgttagt ccacagattt ggccttaagg
    10621 aattgtttca acatgcccag gtaattagtc tcgtgtcgct tggcattttt ttataacgat
    10681 atttgtcgtt aaggacttca agggaaaaca aacaacatgg tcaaatctca accgattttg
    10741 agatatatct tgcgcgggat tcccgcgatt gcagtagcgg ttctgctttc tgcatgtagt
    10801 gcaaataaca ccgcaaagaa tatgcatcct gagacacgtg cagtgggtag tgaaacatca
    10861 tcactgcaag cttctcagga tgaatttgaa aacctagttc gtaatgtcga cgtaaaatcg
    10921 cgaattatgg atcagtatgc tgactggaaa ggcgtacgtt atcgtctggg cggcagcact
    10981 aaaaaaggta tcgattgttc tggtttcgta cagcgtacat tccgtgagca atttggctta
    11041 gaacttccgc gttcgactta cgaacagcag gaaatgggta aatctgtttc ccgcagtaat
    11101 ttgcgtacgg gtgatttagt tctgttccgt gccggttcaa cgggacgcca tgtcggtatt
    11161 tatatcggca acaatcagtt tgtccatgct tccaccagca gtggtgttat tatttccagc
    11221 atgaatgaac cgtactggaa gaagcgttac aacgaagcac gccgagttct cagccgcagc
    11281 taataaaccg tttggatgca atcccttggc tatcctgacg agttaactga aagcactgct
    11341 taggtagtgc ttttttgttt tcattcatca gagaaaatga tgtttccgcg tcttgatcca
    11401 ggctatagtc cggtcattgt tatcttttaa atgttgtcgt aatttcagga aattaacgga
    11461 atcatgttca tacgcgctcc caattctgga cgtaagctcc tgcttacctg cattgtagca
    11521 ggcgtgatga ttgcgatact ggttagctgc cttcagtttt tagtggcctg gcataagcac
    11581 gaagtcaaat acgacacact gattatcgac gtacaaaagt atctcgatac ctattttgcc
    11641 gacctgaaat ccactactga ccggcttcag ccgctgacct tagatacctg ccagcaggct
    11701 aaccccgaac tgaccgctcg cgcggcgttt agcatgaatg tccgtacgtt tgtgctggtg
    11761 aaagataaaa aaacattctg ttcatctgcg actggtgaga tggacattcc actcaatgaa
    11821 ttgattccgg cgctcgacat taataaaaac gtcgatatgg cgatcttacc cggcacgccg
    11881 atggtgccga acaaacccgc aatcgtcatc tggtatcgca accctttgct gaaaaatagc
    11941 ggtgtgtttg ccgctctgaa tctcaacctg acgccttctc tcttttatag ttcacggcag
    12001 gaagattacg atggcgtcgc cctcattatt ggcaatactg cgctatctac cttttcttca
    12061 cgtttgatga acgttaatga attaaccgac atgcctgtcc gtgaaactaa aattgcgggc
    12121 attcctctga ccgttcggct ttatgcggat gactggacat ggaacgatgt gtggtacgca
    12181 tttttactgg gcggcatgag tggaactgtc gttggcctgc tctgctatta cctgatgagc
    12241 gtacgtatgc gccccggcag agaaatcatg accgccatca agcgcgaaca attttacgtg
    12301 gcgtatcaac cggtggtgga tacacaagct ttgcgagtaa cgggcctgga agtactgcta
    12361 cgctggcggc atcctgtcgc gggagaaatt cccccggatg ccttcattaa ctttgccgaa
    12421 tcgcaaaaga tgattgtgcc gctgactcag cacctgtttg agttaattgc ccgcgatgcc
    12481 gcagaattag aaaaagtgct gccagtaggc gtcaaatttg gtattaacat tgcgccggac
    12541 catctgcaca gcgaaagctt taaagcagat atccagaaac tgctcacttc cctgcccgca
    12601 caccatttcc agattgtgct ggaaattacc gagcgcgata tgctgaaaga gcaagaagcc
    12661 acacaactct tcgcctggct gcactcggtc ggcgtagaaa ttgctattga tgacttcggc
    12721 accgggcaca gcgcgcttat ctatcttgag cgttttacgc tcgattatct gaaaattgac
    12781 cgtggattta tcaacgccat cggtacggaa acgatcactt cacccgtact tgacgcgatg
    12841 ctgacgctgg cgaaacgcct caatatgctg acggttgctg aagggggcga aacgccggaa
    12901 caggcgcgat ggctaagcga acccggcgtt aatttcatgc aaggctactg gattagtcgc
    12961 ccgttaccgc tggacgattt tgttcgctgg ctgaagaaac cgtatacgcc gcagtggtaa
    13021 ggtgtgctta cgtcccttat tattcatagt gaaagcatgc cggattgcgg ctaatgatga
    13081 gtaaaaggaa atccgttgca gatgattgtg cgcatactgc tgctgtttat cgccctgttc
    13141 accttcggtg cgcaggcgca ggctatcaag gaaagctatg cctttgccgt gctgggcgaa
    13201 ccccggtacg catttaattt caaccatttt gattatgtga accccgccgc gccaaaaggt
    13261 gggcagataa cgttgtcagc cctcggtacc ttcgataatt tcaaccgcta tgcactgcgc
    13321 ggcaacccgg gcgcacgcac cgagcagttg tacgacacgc tatttacgac ttccgatgac
    13381 gaaccaggca gttattaccc gctgattgct gaaagtgcac gctatgctga cgattattcc
    13441 tgggtggagg tcgctattaa tccgcgcgcc cgttttcatg atggttcgcc cattactgcc
    13501 cgcgatgtag agtttacttt tcaaaaattt atgaccgaag gcgtgccgca atttcgtctg
    13561 gtctacaaag gcaccaccgt caaagccatt gcaccgttaa ccgtgcgcat tgagttagct
    13621 aaacccggca aagaagatat gctgagtctg ttttcgctgc cggtatttcc agaaaagtac
    13681 tggaaggatc acaaacttag cgacccgctc gccacgcctc cgcttgccag tggtccgtac
    13741 cgcgttacgt cctggaaaat ggggcaaaat attgtctatt cccgtgtgaa agattactgg
    13801 gcagcaaact taccggtaaa ccgtggacgc tggaatttcg acaccattcg ctacgattat
    13861 tacctcgatg ataatgtcgc ctttgaagcg tttaaagcag gtgcctttga tttgcgtatg
    13921 gaaaacgacg ctaaaaactg ggccacgcgt tataccggta aaaatttcga taaaaaatac
    13981 atcatcaaag atgagcaaaa gaacgaatca gcccaggata cgcgctggct ggcgtttaat
    14041 atccaacgtc cggtattcag cgatcgccgg gtccgggaag caatcactct cgcctttgac
    14101 tttgaatgga tgaacaaggc gttgttttac aacgcctgga gtcgcacgaa cagttatttt
    14161 cagaataccg aatacgcggc cagaaattac cccgacgccg cggagctggt gcttctggca
    14221 ccaatgaaaa aagatctacc gccagaagtc ttcacacaaa tctaccagcc gccggtatct
    14281 aaaggcgatg gctacgatcg tgacaacctg ttaaaagccg acacacttct caacgaagcg
    14341 ggctgggtgc tgaagggtca gcaacgcgtt aatgccacaa cgggtcagca actcagcttt
    14401 gaattattgc ttcccgcaag cagcaatagt cagtgggtat tgccgttcca gcacagcctg
    14461 caacggctgg gtatcaacat ggacattcgc aaggtggata actcgcaaat caccaaccgc
    14521 atgcgcagtc gcgactatga catgatgccg cgcctatggc gggcgatgcc gtggcccagt
    14581 tccgatttac agatttcctg gtcatcggaa tatatcaatt ccacttataa tgcccccggc
    14641 gtgcaaagcc cggttatcga ctcactgatc aaccaaatta ttgccgcgca gggaaataaa
    14701 gaaaaattat tgccgttggg gcgagcactg gatcgcgtat taacgtggaa ttattacatg
    14761 ctgccaatgt ggtacatggc ggaagaccgt ctcgcctggt gggataaatt ctcccacccc
    14821 gctgtacgcc ctgtttacag cctgggtatc gatacctggt ggtatgacgt taataaagcg
    14881 gccaaactgc cgtcagccag gcaacaggga gagtagatgg gcgcttacct gattcgccgt
    14941 ctgttgctgg tgatcccaac attatgggcg attatcacca tcaacttttt catcgtgcaa
    15001 attgcgcctg gcggtccggt cgaccaggcc atcgccgcca ttgagtttgg taatgccgga
    15061 gtattacccg gcgcaggcgg tgaaggtgtt cgtgccagcc atgcgcaaac gggtgtcggc
    15121 aatatcagcg acagtaatta ccgtggcgga cgcggattag atccagaagt gatcgctgag
    15181 atcactcatc gctacggttt tgataagccg atccacgaac gttacttcaa aatgctctgg
    15241 gactacatcc gctttgattt tggtgatagc ctgtttcgca gcgcctcggt gctgacgctg
    15301 attaaagaca gtctgccggt ttccatcacc ctcggattgt ggagcacgct gattatctat
    15361 ctggtgtcga ttccgttagg cattcgcaaa gctgttcata atgggagccg ctttgacgtc
    15421 tggagtagcg catttatcat tatcggctac gccattccgg cctttttgtt tgccatcctg
    15481 ctgattgtct tcttcgcggg cggcagctat ttcgacctgt tccctctacg cggcctggtt
    15541 tccgctaact ttgattcgct gccgtggtat cagaaaatca ccgattatct gtggcatatc
    15601 acgctgccgg tgctggcgac ggtgattggt ggctttgcgg cgctgaccat actgacaaaa
    15661 aactcattcc ttgatgaagt gcgcaagcaa tacgtggtga ccgcgcgtgc gaaaggggta
    15721 agtgaaaaaa atattctctg gaaacatgtg ttccgcaacg ccatgctgct ggtgattgcc
    15781 ggttttccgg cgacgtttat cagcatgttt tttaccggct cgctgctgat tgaggtgatg
    15841 ttttcactca atggtctggg cttactgggc tacgaagcga ccgtctcgcg cgattatcct
    15901 gtaatgtttg gtaccttgta tattttcacc ctgattggcc tgctgctgaa tattgtcagt
    15961 gatatcagct atacgctggt tgatccgcgt attgattttg agggacgtta atgtcgcgac
    16021 tcagccccgt caatcaggcc cgttgggcgc gttttcgtca taaccgtcgc ggctactggt
    16081 cgttatggat tttcctcgtc ttgtttggtt tgagtttgtg ttctgagctt atcgccaacg
    16141 ataaaccatt gctggtacgt tatgacggca gttggtattt cccgttgttg aaaaactaca
    16201 gcgaaagcga ttttggcggc ccgctggcaa gtcaggctga ttatcaggac ccgtggctga
    16261 aacaacggct ggaaaataac ggctgggtac tgtgggcacc gattcgcttt ggtgctacca
    16321 gtatcaactt tgctaccgat aagcccttcc cttctccacc ctcccggcaa aactggctgg
    16381 gaacggatgc caacggcggc gatgtgctgg cacgcattct ctatggcacg cggatctcgg
    16441 ttctgtttgg cctgatgctg actctctgtt ccagcgtgat gggcgtgctg gcgggggcgc
    16501 tacaaggcta ttacggcggt aaagtcgatc tctggggaca acgctttatt gaagtatggt
    16561 cggggatgcc gacgctgttt ttgattattt tactttccag cgtcgtacag cctaacttct
    16621 ggtggctgct ggcaattact gtcttgtttg gctggatgag tctggtcggc gtggtgcggg
    16681 cggagttttt acgtactcgt aatttcgact acattcgtgc ggcgcaggcg cttggcgtca
    16741 gcgatcgcag tatcatcctg cgtcatatgt tgcctaatgc catggtcgcg accctcacct
    16801 ttttaccgtt tattttatgt agttcgatca ccaccctgac ctcactcgat ttcctcggct
    16861 tcggtctgcc gctcggttca ccgtcactcg gtgaactgct gttacaaggg aaaaataacc
    16921 ttcaggctcc gtggcttggg atcaccgcct tcttgtcggt ggcgatatta ttgtctttgc
    16981 tgatctttat tggtgaagcc gtccgcgacg catttgatcc taataaggcg gtgtagcatg
    17041 acgcaaactc tgttagcgat tgaagatttg tcggtgggtt ttcgccatca gcaaaccgta
    17101 cgtacagtag tcaatgatgt ttcactacag attgaggctg gcgaaacgct ggcgctggtg
    17161 ggtgagtcag gttcaggcaa aagcgttacc gcgctgtcaa ttttacgcct gctcccttcc
    17221 ccgccggttg aatatctctc cggcgatatt cgttttcgtg gcgaatcgct gcttcatgcc
    17281 agcgatcaaa cgttgcgcgg tgtacgcggt aataagatcg ccatgatttt tcaagagccg
    17341 atggtgtcgt taaatccatt gcataccctg gaaaaacagc tttatgaagt gctttcactc
    17401 caccgcggga tgcgtcggga agcggctcga ggcgaaattc ttaactgcct tgatcgcgtt
    17461 ggtatccgcc aggcggcaaa acggctgaca gattatccgc atcagctctc cggcggcgaa
    17521 cgccagcggg tgatgattgc gatggcgctg ttaacgcgac cggaattatt aattgccgat
    17581 gaaccgacca ccgcactgga cgtctctgtc caggcgcaga ttttacagct gttgcgcgaa
    17641 ctgcaaggcg agctgaatat gggcatgctg tttattactc ataacctcag cattgtcaga
    17701 aaactggccc accgcgtggc ggtaatgcaa aacggtcgct gtgtcgagca aaattacgcc
    17761 gctacgctat ttgcctcacc cactcatcct tacacacaaa agctactcaa cagtgaaccg
    17821 tcaggcgatc cagtgccgtt gccagaacct gcctcaacgt tgctggatgt tgaacagctt
    17881 caggttgcct tccccattcg caaagggatt ttgaagcgca ttgtggatca taatgtggtg
    17941 gtgaaaaaca tcagttttac gctacgagcg ggtgaaacac tgggtttagt gggcgagtcc
    18001 ggttccggga aaagtacgac gggactggcg ctgctgcgac tgattaattc tcagggcagc
    18061 atcatctttg acggtcagcc actgcaaaat ttaaatcgcc gccagctgtt acctattcgt
    18121 catcgcattc aggtggtatt tcaggatcca aactcctcgc tcaacccacg actcaacgtt
    18181 ttgcagatta ttgaggaagg cttacgggtt caccagccga cgctttctgc cgcacaacgc
    18241 gaacaacaag tgatagccgt gatgcatgaa gtgggattag atcctgaaac acgccaccgt
    18301 tatccggcgg agttctctgg tggtcagcga caacgtattg caattgccag ggcattaatt
    18361 cttaagccct cgctgatcat acttgatgaa ccgacatcat cactcgacaa aacggtacag
    18421 gcgcaaatat tgacgctatt gaaatcattg caacaaaagc tgcaactggc ctatttgttt
    18481 atcagccacg atttgcacgt tgtccgcgcg ttatgtcatc aggttatcgt actgcgacaa
    18541 ggggaagtag tggaacaagg accgtgcgcg cgcgtgtttg ccgcaccgca gcaggagtat
    18601 acgcgtcagc tactggcgtt gagctgacgc ttaaaaagga ttgtagtttg aaaagggttc
    18661 ggcaattgcc acaccaaaat ttttcaatcg gcatgttgca gcaaactcgt cctggcgatt
    18721 tacaaacagg cacggctcac cttcacactc cagcaccgaa cacggaactt cgatgtcgct
    18781 taacgcctgg cttagtttgt acatcaccga ccatgcatta tcaccatccg ggctaagcaa
    18841 tttaagcgcc accaggctgt tgtcaccgca cggtccattt tgcggaatcg gttcaacctt
    18901 cgaacctgcg aaaccagcag accagcgaaa gttctgcggt agacgatgga cgattgagag
    18961 ttgtaatgaa gtcacttatt ttccccggaa gcacatttac ttcacaattt gtttacatca
    19021 attttaacac atcatcaaca atccgtcttt atacagatcg taaagattga tgcctcgcct
    19081 gcgtggcctc tatggctctg atttaagtaa tatctgcggg cgtggtcacg tttgcggggc
    19141 tatatgtacc cgtttctgcg atctaactca acctttttaa ctacaatgat gtgacttttt
    19201 acataaattg attttacata aaataaacat atatcggggg aatgatagat ttgtggttga
    19261 catgcatcaa caaaggaagc cttttagctt cctcgttgtg caatagatca ccgttttttc
    19321 ggtcgactgg cgtacagaca gaagagaatg gagctgcttg cgcagaatgc aattgaccaa
    19381 atcatcggcc atgcagagtt aaaggtcgca agagaaagca atgcgccaac aattgcccct
    19441 atgccaaaac ggaaggttcc tgccagcgaa gatgccgttc ccgccatatg gggaaactca
    19501 tcaagaatga ccgccatcgc attggatgac accatcgaca cacagcccac aaacgccgca
    19561 acgccaacca ccagaatccc agccccagca gcgcactgat gaccatccac gctgccataa
    19621 taaattgtat ccacaacccc gagcggaaca tatttaacgc gccaatgcgg cgaacgaagc
    19681 ggctgttaaa gatggtcatc acgaacagga aaacaatgtt tagtgcaaag taataaccaa
    19741 agttttccgg cgcgacgtgg ttaatttcaa tgtagacaaa cggtccggcg ctcaggaacg
    19801 agaacattcc ggcaaagctg aaaccgctgg ccagcatata actcaggaca cgcttatgac
    19861 ggaacagcgc cgcaaagtta ccaatagtag tacgaatgtg aaaaggctgg cgacgctccg
    19921 gtggtaaggt ttctttgatc agaaagaaga tcattgccga agccagaatc gccgccacgg
    19981 cgaggatcca gaagatgtaa tgccagctca gccacaccag cacccagccg ccaactatcg
    20041 gtgccatcag cggtgcaatg gtcgtcacca gcatgacaaa cgacatcatc cgcgagaact
    20101 cttctttcgg gtagatatca cgcatcaaag cgttgataac catgctggcc gcagccgcag
    20161 ccagcccgtg gaaaaaacgc atcacaatca gctgatcgat ggtttgtgcc aacgcacacg
    20221 ccaccgcggc ggcggcaaac accagcgtac cgccgagcac caccggctta cgcccgaagc
    20281 tgtctgccat cggcccgtag attaactgcc ccaacgcaaa gcccagaata taagtactga
    20341 gggtcatctg cgtactgccc gccggtacgc caaactgcgc tgaaattacc ggtagcgcgg
    20401 gcagatacat atcaatcgac agcggcatca acatggccag caggccaagg ataaaaacaa
    20461 tagcaaacga cgaatgctgt cgggtggtca caacgggctc ctgaaagtca ttgaaaagtt
    20521 agacgacgct ggcaatttct tcttcagtta acggacgata ttcaccgggg gctaaatcag
    20581 catccagcgt aataccgcca atacgttcac gatgcagctc aaccacgtgg ttacccacgg
    20641 cggcgaacat gcgtttcacc tgatgataac gcccttcgct gatggtcaga cgaacctgcg
    20701 ttggggtaat cacttccagc accgcaggct tagtgagatc tttttcgtta tgcagctgca
    20761 cgcctttagc aaattgctct gccgtatcgt cagctacagg tgattccagt gtcaccagat
    20821 aggtcttctc gcaatgatgg cgcggagaag taatgcggtg cgaccactga ccatcatcag
    20881 tcatcagcac cagaccggtg gtatcgatat ccagacgtcc tgcggcgtgc agtttccagg
    20941 ctaccggttc atccagaaaa tagagcaccg ttgggtgatc agggtcgtcc gtggagcaaa
    21001 catagccctg aggcttattg agcatgaagt aacgtggacc atgttgctgc gccagcgggt
    21061 tgccatcgta agcgacatca tgttcaggaa gcagtttgaa cgctgcatta cgaacaattt
    21121 cgccatcgac ggtgacacga ttgccgcgga tttcacgccc ggcaatagca cggctaacgc
    21181 cgagttgctg tgcgataaat ttatcaagtc gcatgtgtgt gattttgcct gtaaaaacgg
    21241 aggtcgggca ttgacccgaa aatctgaact gttgtctgcc cagtatagcg gtctaataac
    21301 atccctcaag ggaaaaagat ccatggcata ctattagcag aataatctac ctacgcgaga
    21361 ccatgatttt tacactccgc ccatatcagc aagaagccgt ggatgccacg ctcaaccatt
    21421 ttcgtcgtca taaaacccct gccgttatcg tgctgcccac cggcgcaggt aaaagcctgg
    21481 tgattgccga actggcacgg ctggcgcgtg gtcgtgttct ggtgctggca cacgtcaaag
    21541 aactggtggc gcaaaaccat gcaaagtatc aggcgctggg gctggaagcc gatatttttg
    21601 ccgctgggtt aaagcgcaaa gagagccacg gtaaagtggt atttggcagc gtgcagtcgg
    21661 tcgctcgtaa tcttgatgcc tttcagggtg aattttcgct gttgattgtc gatgaatgcc
    21721 accgtattgg tgacgatgaa gagagccagt atcagcaaat cctcactcac ctgactaaag
    21781 tgaatcccca cttacgcctg ctggggctga ctgccacgcc ttttcgattg ggcaaaggct
    21841 ggatctacca gttccattat cacggcatgg tacgcggcga tgagaaagcc cttttccgtg
    21901 actgcattta tgagctgccg ctgcgttata tgattaaaca cggctatctg acgccgccag
    21961 aacgactgga tatgccagta gtgcaatacg atttcagccg cttgcaggca cagagtaacg
    22021 ggctgttcag cgaagctgat ctcaaccgtg agctgaaaaa acagcaacgc attacgccac
    22081 atatcatcag ccagatcatg gagttcgccg aaaagcgcaa aggggtaatg attttcgccg
    22141 ccaccgttga acacgcaaaa gagattgtgg gattactgcc tgccgaagat gcagcactga
    22201 ttactggcga cacccccggc gctgagcgcg atgtgttaat tgaagatttt aaagcccagc
    22261 gttttcgcta tctggtcaac gtcgcggtac tgaccaccgg atttgacgcc ccgcacgtcg
    22321 atcttatcgc cattctgcgt cctaccgaat cagtgagtct ttaccaacaa attgtcgggc
    22381 gcggtctgcg tctcgctcct ggcaagactg attgcttaat tcttgattat gcgggtaatc
    22441 ctcacgacct ctacgcgccg gaagttggta caccgaaagg caaaagtgac aacgtcccgg
    22501 tacaggtttt ctgccctgcc tgcggttttg ccaacacctt ttgggggaaa acgaccgccg
    22561 acgggacatt gattgaacac tttggtcgtc gctgtcaggg atggtttgaa gatgacgacg
    22621 gccatcgcga acagtgtgac ttccgtttcc gttttaaaaa ttgcccgcaa tgtaacgcgg
    22681 aaaacgatat tgccgcccgc cgctgccgcg aatgtgacac ggtactggtt gatccggatg
    22741 atatgttaaa agcggcgcta cgactgaaag acgcgctggt attacgctgt agcggcatgt
    22801 ctttacagca tgggcacgac gagaaaggcg aatggttgaa aatcacctat tacgatgaag
    22861 acggcgcgga tgtgagtgag cgtttccgtc tgcaaacgcc cgcccagcga actgccttcg
    22921 agcagctttt tatccgcccg catacgcgca caccgggcat ccctctgcgc tggatcaccg
    22981 ccgccgatat cctcgcccag caagccttac tgcgacatcc ggattttgtc gtcgcccgca
    23041 tgaaaggtca gtactggcag gtgcgtgaaa aagtgttcga ttacgaaggt cgttttcgtc
    23101 gggcgcacga attacgcggt taatggtagt tttgattgat gtataaggcg attgagtata
    23161 gaatctcgcc cgcttttgca tacgcaaagc agatcactta cctgttgctg ggtcgcctgt
    23221 agcaggatta atttaagaga gaaagaaatg tttactatca acgcagaagt acgtaaagag
    23281 cagggtaagg gtgcgagccg ccgcctgcgt gccgctaaca agttcccggc aatcatctac
    23341 ggtggcaaag aagcaccgct ggctatcgag ctggatcacg acaaagtcat gaacatgcaa
    23401 gctaaagctg aattctacag cgaagttctg accatcgttg ttgacggtaa agaaatcaaa
    23461 gttaaagctc aggacgtaca gcgtcacccg tacaaaccga agctgcagca catcgacttc
    23521 gttcgcgctt aattgctgaa taagttgtaa aaaaccccgc tccggcgggg ttttttgtat
    23581 ctgcagatta tgcctgatta cggtattgct attttttgca ggccagataa ggcgttcacg
    23641 ccgcatctgg cattcagaat acaaaaccga ttaattgccg ccagacgtcc ggcgctgcaa
    23701 ttggtcgcgc aaattcggcg gcgtgccttt aatggtcaag gtatcggttg ctggatccca
    23761 gaagatgcgt tcacctaaca gcatcgcatc aaagttaata gtcaagccac cgccgctacc
    23821 ggcaaacttc gtcaactgac gcagtgtgct acggtctgcc gggaagctct cttccagttc
    23881 gtagcctttt tcagccgcaa acttcgtgaa gctcacttcg cttacgcctg ccagctcttt
    23941 cgacagcgat tccagttcga tctcttcgcc tgcctgcagc tgctcattac agtagctata
    24001 aacctgctgg cgcacgttct gtcgctctgc tttatccagt tgtgcttcgg cagtgaaatc
    24061 atcaaccgct tgcaacagcc cacggttttg cgctttcgcg ttcaatcctt cgctggcccc
    24121 gaggaaatcc ataaagaaat ccgccacttt gcgccctact cgccctttca ggaaagtgag
    24181 atagcgggtg gactctggat tggtttccca ttcggttaaa tcgatacgcg caacaatatc
    24241 cgcatgattg atatcaagat aatgggttgg gttgatgtcg agattttcgt taacgcgcat
    24301 actgctcagg ttgctcagaa ctgccaccag cagatactcc accgccagat aacggtagtg
    24361 gcaaaacagc acgaatccac cgtcagcaaa aggatatttc gctaattcgt cacgcaggcg
    24421 cccggttgcc gcgcggctaa atgccagaaa gtcctcttcg ccctgacgct gtaagcgcag
    24481 cgtctgcgcc agttcactct cttcgctaaa caagccgtaa gctttatttt tggcgctata
    24541 gacccgatgc agttctgcca ccatctcaac gacggtttct gtcggttcca gcaatgaatc
    24601 gcgcaacacc agctcaaggt tctgctcatc acgcttgata agctggtgca gagcaatctg
    24661 gttgatatcc agactcatga taaactctcc tttaagaccg ggcggtattc aaccaccgcc
    24721 ggttaagcga cgcaataaaa gatggcggtc attttacaga aggcagcgta acgagaatga
    24781 tttaacgcat aaaaaagcag aaaaaaaacc gttgctacgg taatatgttg ccctttcatc
    24841 aactaactga tttcgattta tgccacaaat ttcccgctac agtgatgaac aggttgaaca
    24901 attgctcgca gagctgctca acgtactgga aaaacataag gctccgaccg acctttccct
    24961 gatggtgtta ggcaacatgg tcactaacct tatcaacacc agcattgccc cggcccaacg
    25021 ccaggcaatt gccaactctt ttgcccgcgc cttacagtcc tctatcaacg aagacaaagc
    25081 gcactaaggg aaacagataa caggttatgg taactcatcg tcagcgctac cgtgaaaaag
    25141 tctcccagat ggtcagttgg gggcactggt ttgcactgtt caatattctg ctttcgctcg
    25201 tcattggcag ccgttacctg tttatcgccg actggccgac aacgcttgct ggtcgcattt
    25261 attcctacgt aagcattatc ggccatttca gcttcctggt gttcgccacc tacttgctga
    25321 tcctcttccc gctgaccttt atcgtcggct cccagaggct gatgaggttt ttgtccgtca
    25381 ttctggcaac ggcgggaatg acgctattac tgatcgatag cgaagtcttt actcgtttcc
    25441 atctccatct taatcccatc gtctggcagt tggttatcaa cccagacgaa aatgagatgg
    25501 cgcgcgactg gcagctgatg ttcatcagcg tgccggttat tttattgctt gaactggtgt
    25561 ttgcgacgtg gagctggcaa aagctgcgca gcctgacgcg tcgtcgacgc ttcgcgcgcc
    25621 cgctggccgc attcttattt atcgccttta tcgcctcgca tgtggtgtat atctgggccg
    25681 atgccaactt ctatcgcccg atcaccatgc agcgcgctaa cctgccgctt tcgtacccga
    25741 tgacggcgcg acgtttcctt gagaagcatg gcctgcttga tgcgcaggag tatcaacgcc
    25801 gtcttattga gcaaggtaat ccagacgccg tttccgtaca gtatccgtta agcgaactgc
    25861 gctatcgcga tatgggcacc gggcagaatg tgctgttgat tactgtcgat ggcctgaact
    25921 actcacgctt cgagaagcag atgcctgcgc tggcaggttt tgctgagcaa aatatttcgt
    25981 tcacgcgcca tatgagctcc ggcaacacta cagacaacgg catctttggc ctgttctatg
    26041 gcatctcgcc gagctatatg gacggcattc tgtcgacccg tacccctgcg gcgttaatta
    26101 ctgcgcttaa tcagcaaggc tatcagctgg gattattctc gtcagatggc tttaccagtc
    26161 cgctgtatcg ccaggcattg ttgtcagatt tctcgatgcc gagcgtacgc ccccaatccg
    26221 acgagcagac cgccacgcag tggatcaact ggctgggccg ctacgcacaa gaagataacc
    26281 gctggttctc gtgggtctct ttcaatggca ctaacattga cgacagcaat cagcaggcat
    26341 ttgcacggaa atatagccgg gcggcaggca atgtcgatga ccagatcaac cgcgtgctca
    26401 atgcactgct tgattctggc aaactggaca atacggttgt gattatcact gccggtcggg
    26461 gtattccgct gagcgaagac gaagaaacct ttgactggtc ccacggtcat ctgcaggtgc
    26521 cattagtgat tcactggcca ggcacgccgg cgcagcgtat taatgcgctg actgatcata
    26581 ccgatctgat gacgacgctg atgcaacgcc tgctacatgt cagcacacct gccagcgaat
    26641 attcgcaagg tcaggatttg ttcaaccctc aacgccgtca ttactgggtc actgcagcgg
    26701 ataacgatac gctggcaatt accaccccga aaaagacgct ggtgctgaac aataacggta
    26761 aataccgcac ttacaactta cgtggtgaaa gagtgaaaga tgaaaaacca cagttaagtt
    26821 tgttattgca agtgctgaca gacgagaagc gttttatcgc taactgatta attataaatc
    26881 agttagcgaa atatcttact tgcaatcggt gtggaaaacg gtagtattag cagccacgag
    26941 tcggcacgta gcgcagcctg gtagcgcacc gtcatggggt gtcgggggtc ggaggttcaa
    27001 atcctctcgt gccgaccaaa tcgcccaccg gataccaccg gaattaacag tttttagaca
    27061 cgaaaagccc gctaatcctt aattagcggg tttttttatg gtttttagtc accggacatc
    27121 accggattta taagctatca gccggatttt ttagttatac gcttagttat acgggcttgc
    27181 gtataactaa agccgtataa ctaaaaccct gttttttcgt gtggaatcat atacatatgg
    27241 cgagaaaaac acccccatta accacggtgc agatcaaagc agccagacca gcggaaaagg
    27301 aatacaccct acaggacggc ggagggcttt ttctcctggt caaaccgtcc ggatcaaaac
    27361 tctggcgatt ttcctactac cggccatcgg acaaaaaaag aatattgctg agttttggat
    27421 cgcttgatga tgtttccctg gctgatgcca gaaaacgccg tagcgagtac agagcgttaa
    27481 tcagtgccgg aactgacccg cagggccatg agaagaaaaa acgagaggca gaggcccgaa
    27541 gacaagggaa cacgttcgaa aatgtggcgg cggcatggta ccaggtgaaa atcagccaga
    27601 atctggcccc caacacgatt aaagacatct ggcgttcgct ggataaatat gtattcccgt
    27661 tcatcggcaa cacgccaata gataccctca ccgcccgaag gttcgttgaa gtgcttacac
    27721 ccatcaagga gcgcggcaac ctggaaacac tcaagcgggt tttacagcgc gttaatgagg
    27781 taatggatta cgccgccaac agtgggctga ttgatgccaa tccggctatg aatgtgcgta
    27841 aggcgtttcc ctcacctgta aaaaaacata tgccaacaat ccgccccgaa cagctgccgg
    27901 agcttatgca ggctttatca gtatcggcaa cagaacggca gaccagatta ctgattgaat
    27961 ggcagttact gaccgtaacc cgtcccgccg aagcgtcatc aacgcggtgg gatgaaatca
    28021 acctggacgc gaagcaatgg acgatacctg ccggacgcat gaagatgcgc agggatcacg
    28081 ttatcccgct ttccggtcag gctatggcgg tgctggaggc catgaaacca atcagccacc
    28141 accgcaatta cgttttccca agtctgaaag acccacagca gccgatgaac agccagacag
    28201 ctaacgcagc attgcggcgt atgggattcg ctggcgtgct ggtgtctcat ggattacgcg
    28261 ccatattcag cacagcagcg aacgaggaag gattcgagcc ggacgtaata gaggcggcac
    28321 ttgcccacgt cgacaccaac gaagttagac gggcatacaa ccggagcaac tacatagaaa
    28381 aacgcatcgt gctgatgcgc tggtggggcg aatttgtcga ggctgcggcg acgggcgtaa
    28441 ccctcgccag tggtaaaagg ggtatccgag ccgtgtagct gtacagaaaa ccagtaaaaa
    28501 ctacgaaaac catgtaaaac cgtcgtataa ttgcatcaaa tttaacgaca aggccgtgaa
    28561 acatgaaacc gttaagatgc aaaaaaatat cagatgcaat tgcgacgggc tgcaactggc
    28621 cctgatggtt cagcatgaat tttggtcaac ctacgatccg gaggacagaa cgacggcccc
    28681 atcaaaaaaa caggtagtag attttctggt atcccgtggc gcttccagaa atctggcggt
    28741 aagtattgat aaggtcgtac gtccggcatc tatgaagatc ggaggcaggc ccaaaaaatg
    28801 gcggtaacaa tcctggaagc ggcagaaatg ccgctttttt tataattcca tttcaaatca
    28861 tcaatataaa aacggtgtat accgtttaaa aacggtggga actgttttta cccatatccg
    28921 atgatttacc gtatttgtca ccggaataca ccggattcac aaggtaaatc acgatggaag
    28981 caatcagaaa aattatcttt cgccaggaag taaaaaaaat tatccacatc aaggcagaca
    29041 gcacgctgca aagcatgatc aacgccggag aatttccgca gggttttcgc gttggtttac
    29101 gccgtcgcgg atggtatgag gatgatgtgt tggcctggca gaaagaacgc gaacaggaag
    29161 cacgcggaac ggctgcttaa cgggtatcac agatatgaca aacacgaaaa aagcggcccc
    29221 gatatggagc cgcctttctg aacaattaac ccgctgcgcc ttatgtgtat atgatcccaa
    29281 acataagcac ggggatgata gccgctatca ggctggtggg caatgcaatc agtctggttc
    29341 agttcgttgc catacctgca atgagcgctt ttccctatac tctttaagga attgctcaag
    29401 ggcaaaagca catggtgcga atctttctga ttcatgctct atctttctgc gccgtctttt
    29461 ccgtgccggt gataatgttt tggtcaattc tttatcggtc attgtgttgt cctgcatagc
    29521 aatgcgccgt aatacctcac accacggcgc tgatagtttt tatcctttgg gttctatgcc
    29581 gcgccgcttt agttcagtgc gccccaactc tttaagccag ttggctaggc ttatgccgtc
    29641 gctctgtgct tctttgtcga attgctcttt tagctctgga gaaattcgca ttctgaattg
    29701 tggggattgc ccgtcccctt tagggctttt atcgcgtttg attattgaca agtggtcacc
    29761 tattgaatta gcctttccat tgttaggtgg ccaccttaac acaagagcac ttaaaaaagc
    29821 aaagccccgc aagtgtcatt accactcgca gggcttctaa ccaacaacgt aaactaggag
    29881 ccgttatggt tgccgtaaat catataccac accttgtaca cacacaaacg gcctttgtgt
    29941 ggcgttttct ggccctgagt gccggagaat ctcaaatcat ccacgtaacc gcctggacgg
    30001 aacgcgaagc gcgtagccgt tgcccgtccg gttgtgttgc tgtattcgcc gcccgtattc
    30061 gtcaggggga aacctatgca caataaaacc acaccgaacg cagcagccgc cgcactcact
    30121 acgctgatgc acgcgcttat tgatattgaa tgcactgcag agcttgcgca gggagaagaa
    30181 cagaaagacc ggacacagtt cgccctggaa tgtatccgat acatcgcaac gcggtcgctg
    30241 aatgacgcta aaaatattct tgttgctgat tgtgaaaatg gggggggtta tgcgtgatga
    30301 tcgttttaat tccctgaaac aggaatttcc cggcgttcct gatgatgcgg ctgatgcgct
    30361 ttcgtcaatg ccagaactta ttagagcggc ttttttctta ctttccacga gagaatataa
    30421 atcaacgggg cttgatgtac tgaatatcgc cgccgattat gcggaatatg tggcagaggc
    30481 gcgttacaga agaaaatttc ctgaggatgt aagccatgcg tgatatttac cacgaaacaa
    30541 tagaccgcgc atttcttgca ctttctcaca gtgaaaacat gctggaaata ttgcgcatat
    30601 ggcttgaaac acttggcgac aatgaacgcg acaaacaaaa atcaagaatt gccacggcat
    30661 taataacgct tcttgagcct gtaataatgg aactgcaaga aatagatcta ttgcacgaca
    30721 gatataaaga acagcacacc ggagaataaa aataatgaaa cttaaatatt ctggcttaac
    30781 tgccagtggc aacactcacc ctaaatttac gcgcggtgat atttaccgcg accagtacgg
    30841 cggcacggta atgattaagg gcgtggaaga acggcgtgta acctaccgcc gtgaaggtta
    30901 cgaatatgat tgcgtgatgc ctgtttatca gttccggcgt gatttttctc tggtacagac
    30961 cgcgccgcat aacgtgccca ccagcaacgc cagggcacgg gcaaacatcc agaagctgaa
    31021 aaccatgatt aacggattca ggggcaagaa atgaaaagcg caccgaactt aaaaaaacag
    31081 ccttacgaca agatgaccga agtcattatt tttgcgggta gtgatgcctg ggcacatgcg
    31141 aaacagtggc aggaacagga cgggcgactg gctggcgata atgtgcctcc cgttgtgctg
    31201 gctgatgatc aactggatga actggcagac ctgagaatca tcgacgaggg gcgctattgt
    31261 gtccggctgt acaaggcagg ccacatcagg ccatcaaata ttaatgccat tgcgcacaag
    31321 ctggcggcgg cgggtgtaac tgatgcgaat tattaccccg aagggatgca cagccatatg
    31381 cgggagaact ggcgcgaata cctggaacgg gtgcgcggga aagagccggt ggaagaaaaa
    31441 aaccaccagc gaaaaaccac gctaccgatg agcgttggat ctaccggata cgacacgcaa
    31501 ctggattacg tggttaaggg gattattccg gcggtatcgc tatgcagcat atacggggct
    31561 agcgggtcct ataaatcatt ccttgccgga tcgtgggcgt gccatgttgc cactggtcgc
    31621 cagtggggag gccgcagggt tgcacatggt gcggttctct atgtggttgg tgaaggcggt
    31681 atcggcgttc cgcgtcgtgt aaaagcctag gaggttgtgc acgatgagca ggtgaaaaat
    31741 ctgtatctgg taaaccgccc catctttccg gctgccccgc ttgatgttga tgaaatggtt
    31801 atcgctgccc gtcaggtgga gcgggaaacg ggtaaacctg tacgcatgat tattctggat
    31861 acgctggcgc gttgctttgg tgggaatgat gaaaatgatt cccgtgatat gggggcgttt
    31921 atccgtggtt gtgacgaact gaaacgacgc acaggggcca cggtgctggt ggttcaccat
    31981 tccggcaagg atgagacgaa aggcgcgcgc ggttccagtg catttcgtgc ttcgctggat
    32041 gctgaatacc ggatacgcag ggaggacgca ggaagcgaag cgctggttat ctcatgcacc
    32101 aaaatgaagg acgcggagga actcaaagaa gccgcatatg acttacgcgt ggtggagctt
    32161 tttaccgacg ctgacggtga attaatcacg tcgctggtgg tggtggatga tccgcgccct
    32221 cctgttgaac tggagcgcat cgaggaggca gggaacaaga cggaaaacca taccgcgcta
    32281 tgggggtgca tccgttcacg cacacagaac ggcgacaagt gcacgatccc gctgttacgt
    32341 gatgacatga aaaagctggg gtatgaaatg aaaaacttcc ggcgctggct gtacaagctg
    32401 gaaaaagatg gggttattag tatcgatggg gatgatgtag cgccgctata aaagtgagga
    32461 gcaaaagcga gggggataga aagagggcca aaattagccc gctctccctc acttttcgac
    32521 ctgtatacat cctcaaaagt gaggggtaaa aaatacttat aaaacacaca catagaaaaa
    32581 ccgaaaatcc caactgcgac gaagtgagac gcttgaaaaa gtgaggcgaa aaagtgagag
    32641 gttgcgagaa atgacccaaa aacgcagaga cagaacagag ccaaaatata aagcgttaga
    32701 catgactgag cacaccttaa aggtggcaat cagaacgata gaccgccaca cgcgggaagg
    32761 atacgcgaag gaacatcccg acctgataag cgcattcatg accacggcgg cggcaaactt
    32821 tgccacgctg acagaacggg agattgccga agcggaacag gtaacaacca tcaacgttaa
    32881 aaccggagag gtggaattat gacggcacag atagccgctt acgggcggct ggtggacgac
    32941 ccgcaggtaa aacagaccag caagggcaca ccgatgacgc tggcgcgtat ggcggtatct
    33001 ttgccatgca gccaggcaca ggacggacag gcgacgttat ggttatcggt catcgcattt
    33061 ggcaaacagg ccgacttcct ggctaaacat caaaaaggcg atgttgccag cgtatccggc
    33121 acgatgcagg taagccagtg gaccggacag aacggagaaa cgcggcaggg ctggcaggtt
    33181 atcgcagaca gcgtaatcag tgcccgcgcg gcacgtccag gcgggaacag acgcaaaacc
    33241 acaggcacac agggtaatca gccaccagcg ggaggcgatg acccttacgg tgatgatatt
    33301 tcgttctgag ggggtgacga tggtacatga ccgcatagcg gaggaactgg aggcgaaagg
    33361 cttttaccgg agggcggcgg cgcgatgggg tgaagtcatg cagctggtgg agacagacaa
    33421 ggaacggcat cacatcacga tgcgacggct ggaatgttca aggaaggcac agagggcacc
    33481 ggagccgccg gataatttcg gagacctgaa aaaggcagtc gatcgcactt atgccgaaat
    33541 gggtatagat ggtgctggtg atgaaatatg gcgcaattac caggacagct aatcaaacag
    33601 ccggagaaat ccggcttttt tgcgcccaaa aaaagcccga taaggtcaga gggttcttat
    33661 cgggcttttg catatgaggt ttttggatgc actggcgttc gtgatcggga taatcatttc
    33721 ataatttgca acataactca atattattgc ataaaatgca attctgatta taatcaggac
    33781 tggataaaca tccagttatg atttttttag tcgaagagga atttcttact atggctgaag
    33841 agaaaaaagg cggtgtttcg gtgtacataa gccccgaaat cgtggaggtg ctcaagcagc
    33901 gccacaaaaa aaactatgag gctggcgtgg cggctggact ggatccgctg atgacgccgg
    33961 agccgtcgat aggttcactt gtacgctctt atttacttgc ggcgcttggg atgcataaaa
    34021 attatggggg tgaataatgg caggcaaagc aacggcactt aacactaacc agctttttat
    34081 gtacctgaat cgcggggata ttgcggattt taaattcagc cctctgttta ccacgctgtt
    34141 tttcccgaac gtggcgacat tcagcacgca aaacatcatg ctggataccc tggacattga
    34201 agaagtcacc atgtcggcgt tttgttcgcc tatggtgggt agccaggttc agcgcgataa
    34261 agggtacgaa accagcacaa tcaaacctgg ctacatgaag ccaaagcacg aaatcgatcc
    34321 aacgaaaacc atcatgcgca tggctggaga agatccggca cagcttaacg accctaccta
    34381 tcgccgtatg cgcctgatta ctggcaacat gcgccgccag ataaacgcca ttaaggcacg
    34441 cgtggaatgg ctggcggtga atgcggtaac gaccggaaaa aacatcattg agggcgaagg
    34501 catagaacgc tatgaaatcg actggaagat accggaaaaa aacatcatag agcagtccga
    34561 cggcaaaaaa tggtccgagc atgataaaga tatttacgat ccaatctatg acatcgaact
    34621 atacgcagat caggcaggtt gccccgccaa cgtcatgatt atgggcgctg aggtatggcg
    34681 cacgttacgc agctttaaaa aattccgtga actgtacgat ctttcccgtg gttcagaatc
    34741 cgccgcagaa atggcctgta aaaacctggg cgaagtggtg agctttaaag gctatctggg
    34801 cgatattgct cttattgtct attccggcaa atacactgac agcgacggca ccgaaaaata
    34861 tttccttgag cctgatttgc tggtcctggg caacaccaac aataaagggc tggtggccta
    34921 tggtgcgatt atggatcagg aagcggtaag aacgggcgca acgcaaaaca tgtactaccc
    34981 gaaaaactgg attgaggacg gcgatccggc gattgagtac gtgcagacac acagcgcacc
    35041 gcagccggtt ccggcagata ttcgcaaatt tgttaccgtc aaaattggtt aacgggggat
    35101 tatatggaca ctccatatat tgagttattt gcaggcagtc agcaggtatc aacgacactg
    35161 gtacattttg ccgctgatgc tggcgttatt caggaattta ccccgctgat gctggtggac
    35221 aatggcgagt ttaagccgtg ggatggtcag gaatctggca aggctgttta tctgacttcg
    35281 tacctcgtgg acacgtcaaa gcagaaatca gcacagtgtt acaagacggg gatattcaat
    35341 attgccgccg ttaactggcc tgagagcgtc gacaccgatg cgaaaaaatg cgccgccttt
    35401 gcgggttctg gcgtatccgt tcagccgctg gcccgataag cagggggaac gatggcaacg
    35461 aatgaaagca tcatggcgct accgctggcg agtaaattta aagccgaagc gcgggcaatg
    35521 gctgacagag gtttatcaac ctacgaggcc gtatatcaac tcaacaaact ggaagagcag
    35581 gacaagccgc gcgctgatgc gattatggcg cttcatgagc ataaagacta tcagccgctg
    35641 ttgcgtgcaa tggcaaacgt gccttgtatc gatgttgata cggctaaaaa catcctgaac
    35701 atgaccatag agcaggaacg cccgaaggtt gcaccagagc ttaccgcagc ctttgaaaac
    35761 tttatggaca tgcacagccc acaaaccgta tcagctggca tggcatacga tggcagaaac
    35821 ccaggcgatg acggcgacat cgatcgcata ctgaaaacca tctgagacaa ggccggagaa
    35881 atccggcttt tttgcgggtc cttcctggaa ttatggcccg ttacggggcg gcgacctcgc
    35941 gggttttcgc tatttatgac gtttttccgt gaaggtgaca ccaccaccac ttgattaata
    36001 tttaaccatg cagttaaggt aacattatga ttgataaagc ttgttttgta agtcagcagg
    36061 aaatagctga acatttcaag gttaacagaa ccactattcg cgcatggacc aaacagggga
    36121 tgccgtatct taatgcggat cgcggaaagt ctggcggtta tcacatcggg catacattgc
    36181 tttggtcttc aggtaaaagc cgtcttgagg ccatcagata tcacgtagaa accagtgcgc
    36241 tggaaaaaat tatgtttgcc aggctgcttt catctgagcg tgacgagtac tccagtgaag
    36301 aaacagaaca tcgatttgat gaaggtttgc agatttacgg ctattcaccg gaagatgtga
    36361 gcaaggcacg aaataaaatg gctggctttc tggctgggtg gcgtcatgcc gtaagcgttc
    36421 gccgtgccag catggagcaa tcagccgata cagaacagta aagccgataa cttgttaatc
    36481 actcgcagca atgcatgtga tttgtgcaca ctttcggtta actggttcga tgtccggttt
    36541 tagtgtctgt tttttgcgca tgtccggttc atggaaagca tgtttttata tttttcatat
    36601 ggttaacttg tagagaaacc ggacatggat cccgaaaaat tttcataaat agtgaaaacg
    36661 cgcgaggtcg ccgccccgta acgggtccat aattccagga aggacccgac gacaccagac
    36721 aatcagaacg ataggtgcac aatgacagaa gccgaaatac tgggattaat ccgccgtgct
    36781 ggtggaatca gccagcagac tgacgaacag gccacgcagc cggacagcgt gacagccgaa
    36841 aattatgcgc gtgttgttgc tgaggtgatg cgccgtgatg gtatccagct taatgatgtg
    36901 gatatgcgca acatacggat ccgcgttctt gaaatgctgg cctacaatcg ccgcgtggca
    36961 ctgtatcggg aaacggagaa aattacatac cactggaaga agccggagcg gttgcggcgg
    37021 taactggttg atattttcga aattcgccag cggcgaacat cggggaaacc agcctaaccc
    37081 gttgatattt tcgggaacct caaattgagg aggtcggaaa cataacccgt catattctgg
    37141 atgctgataa ttaccacgca gcccattaag gcctaacccg ttgattcttt cggaaacagc
    37201 cattggcgta atccggcgcg gtaacttgct gaacttaaag caaagcgcaa aattgcgctg
    37261 gctggtgggc atgatgccga tatggtgatc cccataacgg aaatatccac cagcacggca
    37321 acggcagaat agccacaaca cagaaaaacc acgaatatgg ggtttttgtt atggcatggg
    37381 catgatgacc gcccctgctc tgaatggtgg aaatcaccac gcagatcatc caccagcttc
    37441 gtttttataa attaaacatc cgggaaaatc cgaccctgaa ttgtgcattt tttcagcaaa
    37501 tcattttagt tatacgtttg gttatacggt ttaaaagttg aatcatatac attattttaa
    37561 atcatgaagt tacacgctca attaaactac tctcgtgcaa aaatcccaag aaaaaaccaa
    37621 cctttacggt tggttttttt atatctgcaa ttaatttgat aaacagaccg tgacacatca
    37681 cagcctgttt attttctgtt atcagaacgt ccagaccact cccgcctgag tattccacgg
    37741 cgattctacc cctgcgccat tgccatagct gactgacaaa tgaccgctta acgtcggggt
    37801 aaacgatgac cttatcccag cctgataaac gccaggggtt ccagccacat cattattaaa
    37861 tttgccatcg tcattaactt tcacatggtt agaatcggcg tattcctgac gtacggcggc
    37921 tttcagccag ggttccagcg tcgtaccatt ttgcaggtcc atgtgatagc ttaccgccgt
    37981 tcccgcttca gcgcgtaata tccgggtatt tcccacatca gcgcgcatgc cgtttgataa
    38041 cgtgtagtcc tgaccatctg tggtaaagcc ggtaaaggcc agatagggtc taacactcca
    38101 caatccgtca acccaacgga acccgctctc aacatgagca cccgcgccgt tactattgta
    38161 atcgccaaac gctgttgccc cattactcat cttgccatgg atggtgttgg caaaacggtc
    38221 aactttcacc accccatcaa cataggcacc gttctgatgc tcccaaccgg cataagcccc
    38281 cagggtatag ctatcgatat taccttttcc gccgcgatca aaaccaatat cagaatgaga
    38341 gtaaccaaag aacaagccgc gaattgtact gctttcttca cgggagaaac ggctatcgat
    38401 accgagcgtc aggcccgtca atgtttgctc aaaaccagct cccgcatcag tggtcacgtt
    38461 gttgcgggtg ttaattgccg aactccacat cgccgtatcg taactaacgc tttttacgct
    38521 accaagacgc tcacgcacgg tgtccagttc tgcatcaaat accagcggtt gtgcggccgc
    38581 catattcagc acatcagtgg ttgaaggggt aatttgcgcg cgattctctg ccaaactcca
    38641 gctatggttg ccattatcca gcaaggtata ttcatacgta ccgatatcaa caacgcctcc
    38701 ggcattgccc aacgtaaatg cagcatcacc gccgcccgtt gttaccagtg taaggctatc
    38761 tcctgctgcc gggctggcac cggtgtccgt cacgaatatt ttgaaatcac ctgttgcctg
    38821 accggtgacg ttgagctgat cgctctgatg attagccata tcggtacgca tataaaaatt
    38881 gccgtttccc gacagggtat tggtggtcaa cgtaatgaaa ttttccgcac ttgccgtcac
    38941 tgatgaacga gtcactggct catccatcat aatcacattt gcgtcagaca tcgcaaggtt
    39001 ggctaagttg aggagggtgt tttggttcgt cgtagtgata tcggcaatga tggcccatac
    39061 gctattttcg agcgaaacgt ccgctttgct ggtatccacg gcaccatgcg ttctaaaaga
    39121 agcgccctca gaaaccacta ccttacccac caacatagcg ggtgcataat ttatttgcgg
    39181 cttcatgacc tcaagaatgc catcattccc tctgactgac acgttaacca ttgtgccagc
    39241 ccagacatta gcgcggccat tgttgataac catattttca gagatggctt tagaggaata
    39301 cgtgatactt ccattctggt ctgatcgacc gagatcatat accgcatttg cctgcacttt
    39361 cgtaccagta tcctttccca gcgattgcat agtggcatgc tcatcaagga tagtatcaat
    39421 ggcctgcgtg tcctccataa caatgagccc ggaaccatca tccagttcat aattttttga
    39481 cacaccatct tttatactaa attggccttt actgtttgta ccactcactt ccagcgcatt
    39541 cgttgagaca attaattttc cgcctgcttt tttatcaacg ccagttgcag tcccgccatc
    39601 cataacctcc agtaagccgc cactatctac agtagtatta taagcgaagt cattttcttc
    39661 aactcgcaaa cttccgccgt tttccaacag catattgtta gcaataccat tcttgatttc
    39721 gaactgaccg agacggtttg ttccgaatgc ctccatgacc cgcgtgcttg ctttaatagc
    39781 accgcctgct ttctgatcta ccgcaatcgc taatcccccc tctttaacct ccagtaatcc
    39841 tcccttttcg atagcggcaa ggacggtaat cccatctttt tcaacgatta agcgcccgcc
    39901 tttaatcgtg ggatcattcg ctgcgccata aacctgtagc acaccattat tgagggtagt
    39961 ctggtttgcc gcgccaccca tttgaacaat ttgataaccg tcatttaata ctgagtattc
    40021 tgcggtacca ttcatttcaa tgtactgata ccctccgt
//
LOCUS       DADKRT010000012        39018 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.012, whole genome shotgun sequence.
ACCESSION   DADKRT010000012 DADKRT010000000
VERSION     DADKRT010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 39018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39018
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.012"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..255
                     /locus_tag="JQ356_000555"
     CDS             <1..255
                     /locus_tag="JQ356_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
                     /protein_id="HAY4620741.1"
                     /translation="IRGEVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQR
                     YFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK"
     gene            complement(305..1561)
                     /locus_tag="JQ356_000556"
     CDS             complement(305..1561)
                     /locus_tag="JQ356_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HAY4620742.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN
                     SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM
                     QLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM
                     LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS
                     RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE
                     KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV
                     VLAFAFMAMFKYKHVRVPTGTQTVSH"
     gene            complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="JQ356_000557"
     CDS             complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="JQ356_000557"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417438.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HAY4620743.1"
                     /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF
                     AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA
                     IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK
                     NRLQSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES
                     SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM
                     LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT
                     TRHPSAESRRYLYKVNTAQKSYRRR"
     gene            complement(2907..3182)
                     /locus_tag="JQ356_000558"
     CDS             complement(2907..3182)
                     /locus_tag="JQ356_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HAY4620744.1"
                     /translation="MSRTIFCIFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
     gene            complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="JQ356_000559"
     CDS             complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="JQ356_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HAY4620745.1"
                     /translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
                     VATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
                     KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
                     ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSL
                     YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQ
                     RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            4423..5142
                     /gene="trmB"
                     /locus_tag="JQ356_000560"
     CDS             4423..5142
                     /gene="trmB"
                     /locus_tag="JQ356_000560"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HAY4620746.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
                     CLASAHEEGLNNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            5142..5468
                     /locus_tag="JQ356_000561"
     CDS             5142..5468
                     /locus_tag="JQ356_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF469 domain-containing protein"
                     /protein_id="HAY4620747.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL
                     FDVWWD"
     gene            5652..6371
                     /locus_tag="JQ356_000562"
     CDS             5652..6371
                     /locus_tag="JQ356_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HAY4620748.1"
                     /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL
                     DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV
                     NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGNLK"
     gene            6547..7593
                     /gene="ansB"
                     /locus_tag="JQ356_000563"
     CDS             6547..7593
                     /gene="ansB"
                     /locus_tag="JQ356_000563"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HAY4620749.1"
                     /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKT
                     DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
                     HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF
                     DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPQQIQQIFNQY"
     gene            7710..8717
                     /locus_tag="JQ356_000564"
     CDS             7710..8717
                     /locus_tag="JQ356_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 family protein"
                     /protein_id="HAY4620750.1"
                     /translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK
                     LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM
                     LTSKGTPASGWSVNFYSFQSAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
                     TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNK
                     QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
                     RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVI
                     K"
     gene            complement(8872..10008)
                     /gene="hemW"
                     /locus_tag="JQ356_000565"
     CDS             complement(8872..10008)
                     /gene="hemW"
                     /locus_tag="JQ356_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HAY4620751.1"
                     /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     CDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
                     GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
                     NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
                     DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
                     RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLC
                     EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE"
     gene            complement(10001..10594)
                     /locus_tag="JQ356_000566"
     CDS             complement(10001..10594)
                     /locus_tag="JQ356_000566"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HAY4620752.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDIVTQTDLGVDSAEETGL
                     TFIENAILKARHAAKVTGLPAIADDSGLAVDALGGAPGIYSARYSGEDATDQKNLQKL
                     LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(10602..10892)
                     /locus_tag="JQ356_000567"
     CDS             complement(10602..10892)
                     /locus_tag="JQ356_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417428.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HAY4620753.1"
                     /translation="MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
     gene            complement(10889..11455)
                     /gene="yggT"
                     /locus_tag="JQ356_000568"
     CDS             complement(10889..11455)
                     /gene="yggT"
                     /locus_tag="JQ356_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic shock tolerance protein YggT"
                     /protein_id="HAY4620754.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT
                     QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
                     LLYVINMGVAEVLQATGNILLPGMWMAL"
     gene            complement(11473..12177)
                     /gene="yggS"
                     /locus_tag="JQ356_000569"
     CDS             complement(11473..12177)
                     /gene="yggS"
                     /locus_tag="JQ356_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate homeostasis protein"
                     /protein_id="HAY4620755.1"
                     /translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA
                     EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
                     RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYSKK"
     gene            12195..13175
                     /locus_tag="JQ356_000570"
     CDS             12195..13175
                     /locus_tag="JQ356_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HAY4620756.1"
                     /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDALDV
                     EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ
                     LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
                     YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAEIG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVAL
                     FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQRVGEGRL"
     gene            complement(13351..13767)
                     /gene="ruvX"
                     /locus_tag="JQ356_000571"
     CDS             complement(13351..13767)
                     /gene="ruvX"
                     /locus_tag="JQ356_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HAY4620757.1"
                     /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
                     ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(13767..14402)
                     /locus_tag="JQ356_000572"
     CDS             complement(13767..14402)
                     /locus_tag="JQ356_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708713.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HAY4620758.1"
                     /translation="MTAPFFPRILGAVAFLNQETEPLTMNLQHHFLIAMPALQDPIFR
                     RSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPL
                     AEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKG
                     QLEQEILDNAWLTASADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA"
     gene            complement(14439..15389)
                     /gene="gshB"
                     /locus_tag="JQ356_000573"
     CDS             complement(14439..15389)
                     /gene="gshB"
                     /locus_tag="JQ356_000573"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HAY4620759.1"
                     /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
                     LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVLLMRKDPPFDTEFIYATYIL
                     ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
                     PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP
                     VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
                     DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
     gene            complement(15402..16133)
                     /gene="rsmE"
                     /locus_tag="JQ356_000574"
     CDS             complement(15402..16133)
                     /gene="rsmE"
                     /locus_tag="JQ356_000574"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311849.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HAY4620760.1"
                     /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
                     GSNQVFDAEITSASKKSVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
                     AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
                     PRVLRTETTALTAITALQVRFGDLG"
     gene            complement(16213..16920)
                     /gene="endA"
                     /locus_tag="JQ356_000575"
     CDS             complement(16213..16920)
                     /gene="endA"
                     /locus_tag="JQ356_000575"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HAY4620761.1"
                     /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG
                     TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
                     AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
                     QGNHNPYVQRACQARKS"
     gene            complement(17015..17512)
                     /locus_tag="JQ356_000576"
     CDS             complement(17015..17512)
                     /locus_tag="JQ356_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HAY4620762.1"
                     /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
                     TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
                     MENVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE
                     QLVAK"
     gene            complement(17589..18983)
                     /locus_tag="JQ356_000577"
     CDS             complement(17589..18983)
                     /locus_tag="JQ356_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY4620763.1"
                     /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA
                     DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL
                     GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
     gene            complement(19419..20573)
                     /gene="metK"
                     /locus_tag="JQ356_000578"
     CDS             complement(19419..20573)
                     /gene="metK"
                     /locus_tag="JQ356_000578"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HAY4620764.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
                     SATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK"
     gene            complement(20877..21092)
                     /locus_tag="JQ356_000579"
     CDS             complement(20877..21092)
                     /locus_tag="JQ356_000579"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620765.1"
                     /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV
                     KTNPQAKTLISTRLEVATRKKRRVLFI"
     gene            21228..21359
                     /gene="yqgB"
                     /locus_tag="JQ356_000580"
     CDS             21228..21359
                     /gene="yqgB"
                     /locus_tag="JQ356_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417414.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HAY4620766.1"
                     /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII"
     gene            21368..23344
                     /gene="speA"
                     /locus_tag="JQ356_000581"
     CDS             21368..23344
                     /gene="speA"
                     /locus_tag="JQ356_000581"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HAY4620767.1"
                     /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE
                     DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF
                     RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE"
     gene            23481..24401
                     /gene="speB"
                     /locus_tag="JQ356_000582"
     CDS             23481..24401
                     /gene="speB"
                     /locus_tag="JQ356_000582"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HAY4620768.1"
                     /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(24607..25365)
                     /locus_tag="JQ356_000583"
     CDS             complement(24607..25365)
                     /locus_tag="JQ356_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY4620769.1"
                     /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ
                     VKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
                     GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA
                     KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK"
     gene            25643..27634
                     /gene="tkt"
                     /locus_tag="JQ356_000584"
     CDS             25643..27634
                     /gene="tkt"
                     /locus_tag="JQ356_000584"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY4620770.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
                     HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
                     SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
                     LNGAIIGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL"
     gene            27948..28391
                     /gene="cmtB"
                     /locus_tag="JQ356_000585"
     CDS             27948..28391
                     /gene="cmtB"
                     /locus_tag="JQ356_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IIA"
                     /protein_id="HAY4620771.1"
                     /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQ
                     AIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIG
                     LSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISHG"
     gene            28419..29807
                     /locus_tag="JQ356_000586"
     CDS             28419..29807
                     /locus_tag="JQ356_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HAY4620772.1"
                     /translation="MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWL
                     PNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSM
                     IMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANT
                     FVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMV
                     ASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIA
                     GGMSGTWMFNLLDGGLVAGPSLGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLI
                     LKMEKTVETESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDTGMGSSAMGATTFR
                     KRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLD
                     TLFNQLTAEHKH"
     gene            29822..31099
                     /locus_tag="JQ356_000587"
     CDS             29822..31099
                     /locus_tag="JQ356_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HAY4620773.1"
                     /translation="MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWK
                     AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG
                     YSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLVEPMCCIIGAYHANYH
                     TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV
                     QKLLPVDLAASKGIELVYVNTKGMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADE
                     LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL
                     QPSFMVTHIGGLDAVPDTVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE
                     LARLVEETHGIWNEQAEKYLLAQFGIDIGEAAQ"
     gene            31096..32061
                     /gene="yggF"
                     /locus_tag="JQ356_000588"
     CDS             31096..32061
                     /gene="yggF"
                     /locus_tag="JQ356_000588"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY4620774.1"
                     /translation="MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALN
                     DVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAV
                     MAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT
                     LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISAC
                     AVKALGGDMQAELIDFCQAKGDYTENRQIAEQESKRCKAMGVDVNHVYSLDELVRGND
                     ILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH"
     gene            32083..32592
                     /gene="fumE"
                     /locus_tag="JQ356_000589"
     CDS             32083..32592
                     /gene="fumE"
                     /locus_tag="JQ356_000589"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarase E"
                     /protein_id="HAY4620775.1"
                     /translation="MAKLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVD
                     NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQD
                     ETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFAVWSEARFSGMVKTALTLAV
                     TTILKELTP"
     gene            32589..33302
                     /locus_tag="JQ356_000590"
     CDS             32589..33302
                     /locus_tag="JQ356_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
                     /protein_id="HAY4620776.1"
                     /translation="MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRT
                     VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
                     PETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
                     WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEES
                     LPANLTLMMTATGEYRLVD"
     gene            complement(33274..33951)
                     /locus_tag="JQ356_000591"
     CDS             complement(33274..33951)
                     /locus_tag="JQ356_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708691.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY4620777.1"
                     /translation="MLTLNQISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
                     LLRVMAGLLTPTAGTVMLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFG
                     LKLQKCPADEITQRTHAALQCCQLADTANSHPLDLHSAQRRMVAVACLEALSPPLLLL
                     DEPSRDFDENWLSVFESWLEKCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGVIRNVN
                     PPDDIHP"
     gene            complement(33945..34622)
                     /locus_tag="JQ356_000592"
     CDS             complement(33945..34622)
                     /locus_tag="JQ356_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HAY4620778.1"
                     /translation="MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTL
                     AQLMAGWYPDFLPGEITGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVE
                     EEVAFGPENLCLAEAEIMARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQ
                     PKLLILDEAFSRLTPQASEMLLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQN
                     GALQPLC"
     gene            complement(34610..35317)
                     /locus_tag="JQ356_000593"
     CDS             complement(34610..35317)
                     /locus_tag="JQ356_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HAY4620779.1"
                     /translation="MHPFTSLILWALAACTTLILPAQTILPIYSAATFFCLIALKATR
                     RRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILAIVSTSQL
                     WMQYVPVQCFIRALFASRLPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEG
                     WYQRLRAMPALIIPLTHNALNDLAVRGAALDMRAFRIHNRRTTLWAPADSTLQRVARY
                     TMILLMLTEFGAWIWLR"
     gene            complement(35318..35896)
                     /locus_tag="JQ356_000594"
     CDS             complement(35318..35896)
                     /locus_tag="JQ356_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HAY4620780.1"
                     /translation="MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
                     SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR"
     gene            complement(35919..36350)
                     /locus_tag="JQ356_000595"
     CDS             complement(35919..36350)
                     /locus_tag="JQ356_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY4620781.1"
                     /translation="MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQHQLHAAWIA
                     GCTGSLTDVALRYARQEGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHM
                     MPGCTVRTTLELVIGSLEELAFSRQPCALSGYDELHISPVK"
     gene            36722..37741
                     /gene="epd"
                     /locus_tag="JQ356_000596"
     CDS             36722..37741
                     /gene="epd"
                     /locus_tag="JQ356_000596"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HAY4620782.1"
                     /translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
                     YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
                     ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
                     DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     TVAFR"
     gene            37791..38954
                     /gene="pgk"
                     /locus_tag="JQ356_000597"
     CDS             37791..38954
                     /gene="pgk"
                     /locus_tag="JQ356_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HAY4620783.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND
                     VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
BASE COUNT         9536 a         9784 c        10433 g         9265 t
ORIGIN      
        1 attcgcggtg aagtggagtt ggtgcggatt cgtgatgccg aagggcgaat tgcggcagaa
       61 ggggcgttgc cttatccacc tggcgtgctt tgcgtggtac ccggggaagt ctggggtggg
      121 gcggttcaac gttatttcct tgcactggaa gaaggggtaa atttgttgcc gggattttcg
      181 ccggagctgc aaggtgttta tagcgaaacc gatgcggatg gcatgaaacg gttgtacggt
      241 tatgtgttga agtaagaata aaaaaaacgg gtcaccttct ggcgacccgt ttttctttgc
      301 gtaattagtg gctaaccgtc tgtgtgcctg tcgggacacg aacgtgttta tatttgaaca
      361 tcgccatgaa cgcgaaggcc agaaccacgg agtaaccagc gaaaatcaac catacggtct
      421 gccagtcggt aatgccgttt tgggtgtaca tctcaacaac tttaccgctc acgatgccgc
      481 cgaggataca gccgaagccg ttagtcatca tcaggaacat cccttgtgca ctggcgcgaa
      541 ttgccgggct aacttctttt tcgacaaaca ccgaaccaga gatgttgaag aagtcgaatg
      601 cgcaaccgta aacgatcatc gacagtacca gcagtacagt accgaacgga gtcgggtcgc
      661 cgtaagcaaa cagcgcaaaa cgcaggatcc acgccacaat actgatcatc attacgttct
      721 taataccgta gcggcttaag aagaacggga tggtcagaat gaacagggtt tcagagatct
      781 gcgaaatcga catgatgatt gacgcatgct gcacaataaa gctgctggca aacatcggat
      841 ctttgtcgaa gctgtgcagg aaggtattac cgaacatgtt ggtaatctgc agttccgcgc
      901 ccagcagcat tgagaagata aagaagattg ccatacgctt gtttttaaac agcgcgaatg
      961 catcgaggcc cagcagggtt gtccagctct gattcgcttg ctgtttagca accggaatat
     1021 gcggcagagt cagggtaaac agaaccagaa tggcggaaag tgctgcgcca atatacagct
     1081 gcatgtggct taattcgaag ccagacaggc tcaccaccca cattgccatg ataaagccga
     1141 tggtgcccca gatacggatt ggcgggaagt cagtaacgat atccatcccg gcattttgca
     1201 ggcgatagta agagatggtg ttgattaacc caagcgttgg catataagca aacgagttaa
     1261 tcaatatcac aaggaacatc gcctccggtg tcgtgacctg tgccgccatg aacagcgtga
     1321 tagcgccaat ggtgtggcaa atggcatata cccatttcgc acttaaccat ttgtcggcca
     1381 caatccccag cagcgcaggc ataaagaccg ctgcgatacc cagtgagcta taaactgcgc
     1441 caatagaagc accgtcaaac ttcagggtaa caaacatata ggagccgagg gtcgtcagcc
     1501 aacttcccca cagacagaac tgcagaaaag agaggatttt cagctgcagc ttaagattca
     1561 tgttaatttc ctcacatcgt gatgcggatg agtgtttgaa aaagcacatt tgaccgtgcg
     1621 agatgatggg attctatcaa cttcgcggac tggttttttg ttacctgtgg caaataattg
     1681 caaacattcc caatttgcaa aacgaaattg tgatgtggat aacatttttg cccctgagca
     1741 tcgtcagggg cggttaatgg aattatcggc ggcggtagga tttttgcgcg gtattcactt
     1801 tataaagata acggcgagat tccgcagagg gatggcgggt cgtcagcgtc tgataaacat
     1861 cgcccggcgt catggtgtta ataatattgg cagcctgaat cttatcattc gaaaagactc
     1921 gcagcacgct gcctgcgccg ccgttatagg cggtgatgac ggcataacgc cgcgatgttg
     1981 ggttatcaat tccgccgaga taaacattgt tcagcatcgc cagatacgcg gtgccggtat
     2041 caatattgct ggcaggatca aacaagaaac tgcggctcgg cgtgccggat ttcccctgcg
     2101 agcggaacac atctttcccg gcagtatgtt gtaccacctg cattaatccc agcgcatcgg
     2161 aacggctgac cgcatacggg ttaaaggaag attcggtctg cataattgcc agaatcagcg
     2221 actcatcaac gccatatttc cgtgacgcct ggcggaccat gccgagatat ttgtgcgcac
     2281 gtttatcaag gtggttcggt accatgttaa tggtgacgct gtagatgata cgcagcccgt
     2341 tactgcggct ttgcagacgg tttttcagca gataatccgc gaagttgctt gcgcgacctt
     2401 cccagcgaat cggctgcccg gtgttgtcca ccacctgacc gtaaaggaaa ggttctttcg
     2461 aaatcgtaat atcatcaacg tcggaataga gatcgaccga actcggatcg tcacccatca
     2521 gcaacgtttt gataattgcc cggcgcaaat gcgcggcagg ttctgtcccg gcgatagttt
     2581 cgatagtaat cgtaccgtca tcgaagttga tgtggctgcg ggtctgatat tgatcggtgt
     2641 atttcacgta gtccttagga ccggcgatca ccacctcttt gaatccccag atgttctcaa
     2701 tattgtgggc aaattgcccc atcagaatat caaaaccgtt ggtatctttg acccaggctt
     2761 cgttataggt atcgcctttt ttggtcgtcg aacaggagat gagcaacggc gcaatcaaag
     2821 ccagcgcgag atattttttc atcattccgg gtgcgtgttg tgtttgtttt tatgcaagtt
     2881 gccggaggcg tgctccggca ctgtttttat tttttatctt ccggcgtata gccctcgata
     2941 tgcacctctt taccctcgaa caggaagttg accatctcct gctcaagcag cttgcggtgc
     3001 tcggcattca tcatgttgag tttcttttca ttaatcagca tggtttgctt gtgctgccac
     3061 tgcgcccagg cttctttgga gatctcgtta tagatgcgtt ttcccagctc gccggggtac
     3121 agctgaaaat cctgaccttc tgcttcacgt tgcaggaaaa tacaaaaaat cgttctgctc
     3181 ataaatcatc ctctttatcg actcacgcgc taaaccggcg cgccagtgcg taactgctgt
     3241 aacaaacgct ccacgggagc cgccaggcca actgacggcg gttgcgctaa gttataccag
     3301 agcgcattgc cttcatccat gcagccggtg aatgacgaca cgggaagcca cataggcaca
     3361 atatctaagt ggaaatggct gaaggtatgc cgaaacgcgg tcagttgcgt caggttatcg
     3421 gcagcaatct gccgttgcgc cagccactgc cgcaaacttt cttcgtcggc aaactgcggg
     3481 aaacagtata aaccgcccca caatccgctc ggcggacgct gcgccagcaa tacttcatct
     3541 tcgtgctgta acagcaaaaa gtagccggtg cgctccggca gcgtctgttt cggttttttg
     3601 cccggataaa gcgaccagct attattggcg gcggcaatac atccgttttg tagcggacag
     3661 agcgaacatt tcggcttcga gcgcgtacaa atcatcgcgc ccaaatccat catcgcctga
     3721 ttaaaccgtt ccacgccgac cgcgggcgtc acctgctcgc tcaaactcca taatttattc
     3781 tcgacctctt ttttcccagg ccagccgctt acagcatagc agcgcgccag cacgcgtttg
     3841 acgttaccgt cgagaatcgg aaagtgctta cccagagaaa gcgagagaat cgcgcctgcg
     3901 gtggaacgcc cgacgcccgg taacgccgcg acttcttcaa aggtttccgg gaatttaccg
     3961 ccgtgtaagg tcgccacttg ttgtgccgct ttatgcagat tgcgcgcgcg ggcgtaatag
     4021 ccaagcccgg tccacaagtg gagaacttcg tcgagcggcg cattggcgag atcggtcacc
     4081 gtcgggaagc gcgccataaa gcgttcaaaa taggggataa cggtcgcaac ctgagtttgt
     4141 tgcaacatca cttctgagag ccatactttg tagggcgtct tgtcaatttg ccagggcagc
     4201 gtttttcgcc cgtatttatc gtaccagtcc agaacctggg ctgaaaattg cgacgcttgc
     4261 atggtcaccg aattcactgt tgttgggggc aagattgcag cacagcgacg gcagggtgta
     4321 aaccggaact ttccgcagcc acggccttat catgcttgca tccggcaact aactttggat
     4381 aatgcccgtt ttcagaacac tttcacaagc gactaaatct ttatgaaaaa cgacgtcatt
     4441 tcaccggaat ttgatgaaaa cggccgccca ctgcgccgta tccgtagttt tgtgcgccgc
     4501 caggggcgac tgaccaaagg ccaggaacat gcgctggaaa actactggcc ggtgatgggc
     4561 gttgagttca gcgaagatat gctggatttc cccgcgcttt ttggccgtga agcgccggtg
     4621 acgcttgaga ttggttttgg catgggggcg tcgctggtgg caatggctaa agatcgccct
     4681 gagcaggact tcctcggcat tgaagtgcat tcaccgggcg ttggtgcgtg cctggcttct
     4741 gcgcatgaag aaggtttaaa caacctgcga gtgatgtgtc acgatgcggt tgaagtgctg
     4801 cataaaatga ttcctgacaa ttcattgcgc atggtgcagc tctttttccc tgacccgtgg
     4861 cacaaagcgc gccataataa acgccgtatc gtacaggtgc cgtttgccga actggtaaaa
     4921 agcaaactgc agctgggggg cgtattccat atggcgaccg actgggaacc ttatgcggaa
     4981 catatgcttg aagtgatgtc ttctattgac ggttataaaa acctgtcaga gagcaatgat
     5041 tacgtaccgc gtccggcatc acgtccggtg acgaaatttg aacaacgtgg tcatcgtctt
     5101 ggtcacggag tatgggactt aatgttcgag agggtgaaat aatggcaaag aaccgtagcc
     5161 gtcgtctgcg taaaaaaatg cacatcgacg aattccagga attaggattt tcggtggcat
     5221 ggcgattccc ggaaggtaca tcggaagaac agattgataa aaccgttgat gattttatta
     5281 acgaggttat cgaaccgaac aaactggcct ttgacggcag cggttatctg gcctgggaag
     5341 gtctgatctg catgcaggaa atcggcaaat gcaccgaaga acatcaggcg attgtgcgta
     5401 agtggctgga agagcgcaaa ctggatgagg tacgcaccag cgaacttttc gacgtttggt
     5461 gggactaaga aagcatacgg gcgatgacaa atgcaaaact gcctgatgcg ctacgcttat
     5521 caggcctgga aagatgcacg atcgagtagg cgggataagg tgtttacgcc gcatccggca
     5581 tggaaaacgc gtactttgtt atcaatctgg ggccagcaaa tgctggcctg attttttctt
     5641 gagggaagac tatgatgcgc aaaatgctgc tggcggcagc actttcagtg acggcaatga
     5701 ccgctcacgc cgactaccag tgcagcgtca cgccgcgtga cgatgtgatt gtcagcccgc
     5761 aaaccgtgca ggtgaagggc gaaaacggca atctggtgat cacgccagac ggcaacgtga
     5821 tgtataacgg taagcaatat tccctgaatg ccgcccagcg cgagcaggcg aaggattatc
     5881 aggctgaact acgcagcacg ctgccgtgga ttgatgaagg cgcgaaaagc cgcgtcgaaa
     5941 aagcccgtat tgcgctggat aaaattatcg ttcaggagat gggcgaaagc agcaaaatgc
     6001 gcagccgtct gaccaaactt gatgcgcaac tgaaagagca gatgaaccgc attatcgaaa
     6061 cgcgcagcga tggcctgacg tttcactata aagccattga tcaggttcgc gccgaaggcc
     6121 agcaattagt gaatcaggca atgggtggaa ttttacagga cagcattaat gaaatgggcg
     6181 cgaaagcggt gctgaaaagc ggcggtaacc cattacagaa tgtgctggga agcctggggg
     6241 ggctgcaatc ctcaatccaa accgagtgga aaaagcagga aaaagatttc cagcagtttg
     6301 gcaaagatgt ttgtagccgc gttgtgactc tggaagatag ccgcaaagcc ctggtcggga
     6361 atttaaaata atcctctatt ttaagacggc ataatacttt tttatgccgt ttaattcttc
     6421 gttttgttac ctgcctctaa ctttgtagag ctccaaaata tattcacgtt gtaaattgtt
     6481 taacgtcaaa tttcccatac agagctaagg gataatgcgt agcgttcacg taactggagg
     6541 aatgaaatgg agtttttcaa aaagacggca cttgccgcac tggttatggg ttttagtggt
     6601 gcagcattgg cattacccaa tatcaccatt ttagcaaccg gcgggaccat tgccggtggt
     6661 ggtgactccg caaccaaatc taactacaca gcgggtaaag ttggcgtaga aaatctggtt
     6721 aatgcggtgc cgcaactaaa agacattgcg aacgttaaag gcgagcaggt agtgaatatc
     6781 ggctcccagg acatgaacga taatgtctgg ctgacactgg cgaaaaaaat taacaccgac
     6841 tgcgataaaa ccgacggctt cgtcattacc cacggtaccg acacgatgga agaaaccgct
     6901 tacttcctcg acctgacggt gaaatgcgac aaaccggtgg tgatggtcgg cgcaatgcgc
     6961 ccgtccacgt ccatgagcgc agacggtcca ttcaacctgt ataacgcggt agtgaccgca
     7021 gctgataaag catccgctaa tcgtggcgtg ctggtggtga tgaacgacac cgtactggac
     7081 ggtcgcgatg taaccaaaac caacaccacc gacgtagcga ccttcaagtc tgttaactac
     7141 ggtcctctgg gatacattca caacggtaag attgactacc aacgtacccc ggcacgtaag
     7201 cacaccagcg atacgccatt cgatgtctct aagctgaatg agctgccgaa agtcggcatc
     7261 gtttataact acgctaacgc atccgatctt ccggctaaag cactggtaga tgcgggctat
     7321 gatggcatcg ttagcgctgg tgtgggtaat ggtaacctgt ataaatccgt gttcgacacc
     7381 ctggcaaccg ccgcgaaaaa cggcactgca gtagtgcgtt cttcccgcgt accgacgggt
     7441 gctaccactc aggatgctga agtggatgat gcgaaatacg gcttcgtcgc ctctggcacg
     7501 ctgaacccgc aaaaagcgcg cgtcctgctg cagctggctc tgacgcaaac caaagatccg
     7561 cagcagatcc agcagatctt caatcagtac taatcacctc gctccggtat cgtgccgggg
     7621 ctttttcact tcagacttac gtccattgcc aattttcatt accctaatga taatcaccgg
     7681 aataaattat ttcgcgtgag gtttttcggg tgaaaaagca atggattgtt ggcacggcac
     7741 tgcttatgtt gatgactggt aatgcctggg cagatggcga accgccaact gaaaatatct
     7801 taaaagatca attcaaaaag cagtatcacg gcattctcaa gcttgatgct atcaccttaa
     7861 aaaatcttga tgctaagggt aatcaggcca cctggtcagc ggaaggcgat gtctcttcca
     7921 gtgacgatct ctatacctgg gtcggtcagt tggcagatta cgaactgctc gaacagacct
     7981 ggacgaaaga taaaccggta aaattctcgg cgatgttaac cagtaaagga acgcccgcgt
     8041 ctggctggtc ggtgaacttt tactcttttc agtcggcagc cagcgatcgt gggcgggtgg
     8101 tcgacgatat caaaacgaat aataaatatc tgatcgtgaa tagcgaagat ttcaattatc
     8161 gctttagtca gcttgaatct gcgttgaata cccagaagaa ctcgattcct gcgctggaaa
     8221 aggaagtgaa agcgcttgat aagcaaatgg tggcggcgca gaaagcagcg gatgcatatt
     8281 ggggaaaaga tgcaaacggt aagcaaatga cccgcgaaga agcctttaaa aaaattcacc
     8341 aacagcgtga tgagtttaat aaacagaacg atagcgaggc gttcgcggtt aaatatgaca
     8401 aagaggttta tcaaccggcg attgcggcat gtcataaaca gagtgaagag tgttatgaag
     8461 tgccgattca gcagaaacga gatttcgata tcaacgaaca acggcgacag acttttctgc
     8521 aatcacaaaa actcagccgt aaattgcagg atgactgggt aacgctcgaa aaagggcaat
     8581 atccgttaac gatgaaagtt tcagaaataa acagtaaaaa agtcgcgatt ttgatgaaaa
     8641 ttgacgatat caaccaagct aatgaacgct ggaaaaaaga taccgaacaa ctgcggcgca
     8701 atggggtgat taagtaagtt tgatatagtg cacgatttgt agcaggatgc ggcgttgacc
     8761 ccgcatccgg caatcaacgt ctgatgcgac gcttgcgcgt cttatcagac ctacaaccgt
     8821 tgccacatgt aggctggata aggcgttcac gccgcatccg gcaatacaag tttactcagc
     8881 cagaaaaagc tccagcagcg aatttaaaaa cagcttccca tgttccgtta tctgccagta
     8941 atccgcacat tctgtgagat aaccctgggc aatcgcctcg tctaactgtg ggcgaatcac
     9001 atcttcgcaa agcccggtat acgcactaaa ctctgcgcgt ggcgcggcct ccagcaagcg
     9061 aaagcggttc ataaagaact caaacggctt atctgcggct tcgacatcac gctggctttc
     9121 cagatacctt ccttgcataa aaccacgagg atgacgcgtt ttagtggtac gcagaatgcg
     9181 cccatccggg aaggtgactt tgccgtgcgc gccgcagcca ataccgatgt agtcaccaaa
     9241 tcgccagtag ttgagattgt gctggcactg ataaccgggt ttggcgtaag cggaagtttc
     9301 atattgctga taacccgctg cggttaataa ctgatgcccc tgttcgaaaa tatcccacag
     9361 cgcgtcatcg tccggcagca ccggtggtcg cgaaccaaac agcgtattgg gttcgatggt
     9421 cagttgatac caggaaagat gcggcggatt cagttcaatg gcctggcgta gatcgccaag
     9481 cgcctcttcc agtgattgat ccggtagtcc atgcatcaaa tcaaggttaa agctacgtaa
     9541 ccctaaaccg ctcgccagct ttgccgctcg tttcgcttct tgcgggccat gaatgcgccc
     9601 aagtcgtttc agcttttctt cgctaaaact ctgcacacca atagagatgc ggttcacacc
     9661 agcacgctga taatcgacaa agcgatcggc ttctaccgta ccagggttcg cttccatagt
     9721 aatttctgca tccgctgcca gcggcaaacg cgcacgcacg ccgtccagca gcgtttgcat
     9781 cgccgggccg gaaagcaggc tcggcgtacc accgccaata aagattgtct ttacttcacg
     9841 gccctgagcg taagccacat cattgtccag atcgcaaagc agatgctgaa cataatcgtc
     9901 gtgcggcact tctcctttca acgcgtgaga gttgaaatcg cagtacgggc atttctgcac
     9961 gcaccacggg atgtgaatgt agagactcag cggcggtaat ttaaccatta cgtaaagcgt
    10021 ccagcagcag tttcaacgcc tgaccacggt gggaaatggc gctcttttct tcgcgggtca
    10081 gttcggcggc ggttttccct tcggaaggta cgaagaagat tggatcataa ccaaagccac
    10141 cagtgcccgc tggttcgcga gtaatcacgc ccggccagct gccgtggcat accagcggag
    10201 tcggatcttc cgcgtgacgc agatatacca gcacgcagtg gaaacgtgcc tgacgttggt
    10261 cgtccggtac gtctttcagt gtttccaaca gtttttgcag attcttttga tcggtcgcgt
    10321 cttcaccgga ataacgcgcg gagtaaatac ccggcgcgcc acccagcgca tctaccgcca
    10381 gaccagagtc gtcggcaatt gccggtaaac cggtcacttt tgccgcatgg cgcgctttca
    10441 gaatcgcgtt ttcgataaag gttaggccgg tttcttcagc ggaatcaacg ccgaggtctg
    10501 tttgtgtcac gatatcaaga ccaaagtcgc taagcagcga cgccagctca cgcactttac
    10561 cggcattgcc ggttgcgagg acaacttttt gcataggata cctaattaat taacgccgcg
    10621 atttctggcg ggatttgttg cggattaatg attttaattt gtttgtggcg gccaagttcg
    10681 cctttttcaa tcaccacctg gcttttggca acccggaatt gcttaccgag aaacttcacc
    10741 agatgactgt tggcctggcc gtcaactggc ggcgcggtaa tggcgacttt aacttcgtcg
    10801 ccatgtaaac cgacaataga atcacggctg gctttcggct gaatatagag ccgtaaaacc
    10861 agaccgtcat cattaactgt tacggcattc ataacgccat ccacatcccc ggcagcagga
    10921 tgtttccggt tgcctgtaat acttctgcga cacccatatt gatgacatac agcagcagaa
    10981 cgaggatcat cggcgagaaa tcaatcccac ccattgccgg tagcaagcgg cgaatcgggc
    11041 gcagcagcgg atcggccagc tgaatcagca cgtattcaat cgggctacga ccctggctta
    11101 cccagctcat aatcgccatc accagcagga cccagaaaat cagcaagccg atggttttca
    11161 gcagaatcag taaaccggca atccagatga ttggcaggaa ggtcaccact ttaaacagca
    11221 caatggcttt gataaaactg agaatatagg caaccagcag cgaggcgctg tcaatgggac
    11281 ccattgccgg aataacgcgg cgcagtggcc cgataattgg ctgcgttacc ttcactacaa
    11341 actgtgagaa ggggttgtaa aaatcacaat gagcccactg catccagatg cgtaataaca
    11401 gcaccatggt atacagctca atgaccgttg aaagcaggaa agtcaacgta ttcatggcgt
    11461 tcctttaatt ccttattttt tagagtaatc acgcgcacca aaaattgcag tgccgatacg
    11521 aaccatcgtg ctacctgccg caatggcggc ttccatatcg tccgacattc ccagagagag
    11581 cgtgtcgata tgcgggtagc gcgttttcag tccggcaaat gctacagcca tttggcgtgc
    11641 aacttcaaac tgccttacat attctgactc aggcgcaggg attgccatca gcccgcgcag
    11701 acgtaaacgc ggtagttcag cgaccgccgc tgccagctcg tccagttctg ccagttgaat
    11761 cccggactta ctgttttcat cactaatatt aatttgaatc agtacgttaa gagggggaag
    11821 ttctgccggg cgctgatcgt tgaggcgggt agcaatgcgc aaacggtcga tggtatgaca
    11881 ccagtcgaaa tgctctgcca ccaggcggct tttattagac tgcaacgggc caataaaatg
    11941 ccattctaat cctgttacgc ccagttcctg aaagtggcga attttatcta ccccttcctg
    12001 aacgtagttt tcaccaaatt gacgctgccc ggcatcaatg gcttctgcga tggcgctcgc
    12061 aggttttgtt ttactgactg caagcagcgt aatttcttct ggagaacggc cgcaacgcgt
    12121 tgcagccgct gagattttgt cccggacctg tgccaggtta tgcgcaatat cgttcatttt
    12181 ccgaggatct tagtatgaat atggaagaaa ttgtggccct tagtgtaaag cataacgtct
    12241 cggatctaca cctgtgcagc gcctggcccg cacgatggcg cattcgcggg ctaatggaag
    12301 ctgcgccgtt tgatgcgctg gacgtcgaag agctactgcg ggagtggctg gatgacgatc
    12361 agcgggcaat attgctggaa aatggccagc tggattttgc cgtgtcgctg gcggaaaacc
    12421 agcgattgcg tggcagcgca ttcgcgcaac ggcatggcat ttcgctggcg ttacggctgt
    12481 taccttcgca ctgcccgcag ctcgaacagc ttggcgcacc aacggtattg ccggaattac
    12541 tcaagagcga gaatggcctg attctggtga cgggggcgac ggggagcggc aaatctacca
    12601 cgctggcggc gatggttggc tatctcaatc aacatgccga tgcgcatatt ctgacgctgg
    12661 aagatcctgt tgaatatatc tatgccagcc agcgatgttt gatccagcag cgggaaattg
    12721 gtttgcactg tatgacgttc gcatcgggat tgcgggccgc attgcgggaa gatcctgatg
    12781 tgattttgct cggagagctg cgtgacagcg agacaatccg tctggcactg acggcggcag
    12841 aaatcgggca tttggtgcta gcaacattac atacgcgtgg tgccgcgcag gcagttgagc
    12901 gactggtgga ttcatttccg gcgcaggaaa aagatcccgt acgtaatcaa ctggcaggta
    12961 gtttacgggc cgtgttgtca caaaagctgg aagtggataa acaggaagga cgcgtggcgc
    13021 tgtttgaatt attgattaac actcccgcgg tggggaattt gattcgcgaa gggaaaaccc
    13081 accagttacc gcatgttatt caaaccgggc agcaggtggg gatgataacg tttcagcaga
    13141 gttatcagca gcgggtgggg gaagggcgtt tgtgacgttg ccatgcccga tgcgcaagtt
    13201 tatagggcct ataaaggcaa taaatgtctg atgcgacgct aacgcgtctt atcagaccta
    13261 cagccgctgc cagatgtgtg ctggataagg cgttcacgcc gcatccggca agatggcggt
    13321 aacgactatc cgccaggctt ttagatcgcc ttaatatccc tgctcgaaat agctttcgag
    13381 aataataacc gcagaggcag agtcgacttt gcctttgttg agcgcccgat agccgccctg
    13441 ttcaaacaga ccggaacggg cttccacggt gctaagacgt tcgtcatgga gctttacttc
    13501 aacaccgaaa cgaccatgaa tacggttggc aaatttacgc gctctggcag tcaatggttg
    13561 ctcggtgccg tccatattca gcggcaaacc gacgatgatt tcgtccggct gccactcttt
    13621 cagtaaacgt tcgatgaggt tccagtccgg cgtaccgtcc tgtgctttaa ttgcaggcaa
    13681 agggcgagca gtgccggtaa tgcgttggcc gaccgctacg ccaatgcttt tggtgccgaa
    13741 gtcgaaggcg agtaaggttc cactcatcag gcgtgccctg ccacaccagg catggtgaga
    13801 atatccacac caatcagttt tgccgcctcg cgccagcggt cggcaatcgg cgttttgaac
    13861 agaatattca gatccgccga ggccgttagc cacgcgttat cgagaatttc ttgttccagt
    13921 tgaccttttt cccaggaggc atagcccaga gccaccaata cgtcagacgg ttgtttatcg
    13981 gtgccgagcg tttccagcac atcgcgggaa gtggtcatca ccgtgttgtc tgaaatgcga
    14041 atgctggaag caaaattgga gggcggagta tgcaaaataa acccgcgatc ttcagccagt
    14101 gggccgccga gcataacagg tttatccaga cggattgatt catcacgcgg ctccggcgtg
    14161 atcttcagct tttccagaat cccttcaatt ttgagatttt ccagcggctt gttgacgatg
    14221 atccccattg caccattggt attatgttcg caaatgtaga ccacggaacg acggaaaatc
    14281 ggatcctgga gagcaggcat ggcaataaga aagtgatgct gtaaattcat tgtcagaggt
    14341 tctgtttcct ggttcaaaaa agcaacagcg cccagtatgc gtggaaagaa gggcgctgtc
    14401 actcagagtc tcaacgagat ccttctcgct aaggtgggtt actgctgctg taaacgtgct
    14461 tcgatggcat ccattaacat tccggtgatc gacaccggaa actctgcttc aatctcacga
    14521 atacaggttg ggctggtgac gttaatttca gtcagacggt cgccgatgat atccagacca
    14581 acaaaaatca gccctttttc tttcagcgtc ggcccgatct gacgggcgat tttccagtca
    14641 ctttccgtca gcggccgagg ttcaccgcga ccaccggcag ccagattgcc acgggtttcg
    14701 cccccctgcg gaatacgcgc caggcagtac ggtaccggct cgccatccac caccagcacg
    14761 cgtttgtcgc catctttaat ggctggcagg taattttgcg ccatgcagta gcgagtgcca
    14821 tgctcagtca gggtttcggc aatcacgccg aggtttggat cgccttcttt cacgcggaaa
    14881 atcgacgcgc cgcccatacc gtccagcggc ttaagaatga tgtcgctgtg tttctcccag
    14941 aacgctttta gctgcgcttt attgcgcgta accagcgttt ctggcgttaa gtcagagaac
    15001 caggcggtaa acagtttctc gttacagtcg cgcaggctct gcggcttgtt aacgatcagc
    15061 gtccctttct cttcggcacg ttccagaata taggtcgcgt agataaactc ggtatcaaac
    15121 ggcgggtctt tacgcatcag gagcacatcg agatcggcca gcggcagatc ctgttcaccg
    15181 acgaacgaaa accactcttc gtagttctgc ttcacgttca gcgtgcgggt atgggcgcga
    15241 gcttcgccat tgatcagata cagatcgccc atctccatat agtgaagttc gtaaccacga
    15301 cgctgtgctt ccagcaacat agcgaaactg gaatctttct tgatgttgat gtttgcgatg
    15361 gggtccatca cgatgccgag cttgatcatt attcttctcc gttagcccaa atcgccaaat
    15421 cgtacttgta gcgcggtaat ggcggtgagc gcagttgtct ctgtacgcaa aacgcgaggt
    15481 cccaacagga tatcagtaaa ttgatagcgg gcagtcatgg caatttcatc tgccgataaa
    15541 ccgccttccg ggccaatcag caggcggacg cgttcaaccg gtaacggcaa cgtattgatg
    15601 ctgttactgg cgcgcgggtg aagattcagt ttcagtcctt catcctgctc tgcacaccag
    15661 gcttccagat ccatcgctgg acggatttcc ggcacccggt tacgaccaca ctgctcacag
    15721 gcagcaattg caatcttctg ccactgctgg agcttcttgt tcagacgttc actatccagt
    15781 ttaacgccgc agcgctcaga aaaaagtggc gtaatgaggc ttacaccgag ttcgatcgat
    15841 ttctggatcg taaattccat tttttcacca cgcgacatca cctgaccgag gtgaatatgc
    15901 agcggagatt cgcgatcgtc gatcttgcct tccagcacct tcacttccac gctttttttg
    15961 ctggcgctgg taatttcggc gtcaaagacc tggttgctac cgtcaaacaa ttgcaacgcc
    16021 tgccccggcc ccatgcgcag tacgcgcccg atatggttgg cggcatcttc gcaaagcgcg
    16081 atgtgagaat ggctggtcag tggttcagga tgataaatgc gggggatacg catagttaaa
    16141 aatccgcgtc gtctccccac gcggttgtac gcgtggggta ggggttaaca aaaagagtcc
    16201 cgctagtgta ggttagctct ttcgcgcctg gcaagcgcgt tgcacatacg ggttatgatt
    16261 gccttgcacc ttcgcgatgc gttcatcgcg ctcgcactcc cagtcggtaa ccggatacat
    16321 cttgttccat gcgttgaaca gctgcgtttg ctggcgagag agtgtcaggt tgtattggtc
    16381 gcgcatatag aagtaggtgc gcgcaatggc accgcgtgca cgcgctggtg gttcggcagc
    16441 tttttctttg aaatcgacct tcatggcgca ttgaccgtac tggccttcgc cgccattcca
    16501 ctggctgtac ataaagttgc cgcgatcgcc attcacctca ccgactgacg gctgcaggtt
    16561 atgcatatcg ctttccatct tgcgatagac cggatcttta gcgcagtttt tacgtccacc
    16621 gtcctgccag cactggcgct ggtgaccgaa ctgccaggcg ggaacgacgt gttcccactc
    16681 tacgcggctg gctcggtttt catttttgcg cacctgatag ccgcacgatt gcagatcaac
    16741 aacgcctttt ttgccctgcc agttaatttt acatccgcaa taaaacgtac cgggcgcgtc
    16801 agcgtggact tttaccgccg cggctttcgc ctgagaaaaa ctattgatac cttcggccaa
    16861 cgccgggccg gaaaatgctg cgctcagtac caccgcagca atagacaaat aacggtacat
    16921 cacttactcc gtgttaaaac gagccagcaa cgtagcgaaa gttgttttgg tatgcaatca
    16981 gccagatcag gaaagttcct gatagttcag atggttattt tgcgaccagt tgttcgccgc
    17041 agtgaacaca gcgatagacg gcttcgccac gaactacgcg attatggcgg cgtacggtaa
    17101 gctgatgctc ctggcacttg cagcggtagg ggaaggtgtt gcgacgcacg gattgcagtt
    17161 cgaactgatg cgtacgacgg gcgggaacac ccagcacgtt ttccatcatc cacttccact
    17221 ctttgccatg tggtgctacg cgcccgaaat gtttccatac cagcaaatgt gccagttcgt
    17281 gcggcaccac ttcttcaata aaggcttcac tgttttccaa cagcaaaacg ggattgaggc
    17341 ggatttcata gctttccagc caggctgttc cggcggaggt gccgcgctgg gtataagaga
    17401 gttttggctc cgggtagtta cgccccaatt tcaggttagc ctgggcgagt ttttcccgca
    17461 ggcgacgcat aacggcctgt tggatggcga tagggagacg ggatgttttc atagcggcag
    17521 aggatagagc gaagaaaaga tgactgcaag aggtggcttc ctccgcgatg ggaggaagct
    17581 tggggagatt aatcgtgagc gcctatttcg cgcagtttac gacctttcat cagattacgt
    17641 tcaatatgtt ccagcgaaac gtgtttggtt tccggtacca gccacaatgt cagcaggata
    17701 aacagtacgt tcagagccgc atacacccag aaggtgttgg cgttacccag tgtgttgagc
    17761 atggtcagga acgttgcgcc aacgatcatg ttggcaatcc agttggtggc ggtagagcag
    17821 gtgatgccaa aatcgcggcc tttcagcggc tgaatttcgg agcacagtac ccaaatcagc
    17881 ggaccggcac tcatggcaaa accgacaata aacatcagca gcatggcgat ggcgaaatac
    17941 tgcgctgacg gagagtgaat accgatatgc atcattgtac cgagtacgcc catgccagca
    18001 gccatcacca ggaagcccag cgttagcgtt ggtttacgtc cccagcggtc aacaaggccg
    18061 attgcgataa aggtggcaag tacgttggtc aggccgacaa tcactgtccc ccacatttgc
    18121 tcggtagtgt tggtataacc cgccagttcg aagattttcg gcgcgtaata catgatgacg
    18181 ttcatcccgg tgaattgctg cattacctgt aacagtacgc caaggaacac cgcgcggcgg
    18241 aagttgctat tctctttaaa cagcgcccag ccactctgtt taacctgcaa actttcacgg
    18301 atttcatcca gttcgcgttt cgcttccgcg ctggtgtcac gcaggcgtag cagcacgcgt
    18361 tcggcatcaa caaaacggcg tttggcggca aaccaacgtg ggctgtctgg caggaagaag
    18421 acaccaatca gcagcaaaat tgccgggatg ataatcacac ccagcatcca gcgccatgca
    18481 ccggtgtagc tgaaggcggt atcagaaaga taagcaccga ggatcccgat agtgatcatc
    18541 aactgataca tcgagatcat actgccacga attttttccg gcgcaatttc agagaggtac
    18601 agcggtgcgg tataagaggc cacacccacc gccagcccca gtagaacgcg ggaaagaatc
    18661 aatacttcaa cgtttggcgc agccgcagag aacagcgaac cggcaacaaa caaaattgcg
    18721 ccgatcatca ggctcttttt gcgcccgagt ttaaaggaga gccagccgct gcccaccgca
    18781 ccgactgccg caccgaacat catggagctt acgacccatt cttgcgtgtg cgaagtaatc
    18841 tggaattcat ctgcaataaa cggcagtgcg ccagcaatta caccgatatc caggccaaag
    18901 agtaatcccg ccagagcggc aaggaagcag acgaaaaacg tcattgcctt gtttgaccgc
    18961 ccctgttttt tagcgtcagg catgatgccc tccaatatgg ttatttttta ttgtgaatta
    19021 agataggtga gtacgacgta aaaagatgtg aagcaaatca catcagtgta atcgcttaca
    19081 ctaacattta tcttagttat ggtttaagtg catgaaaata attgagttat atcatcatag
    19141 attaaacgct gttatctgca attaagactt tactgaaaag aaatgtaaca actgtgaaaa
    19201 ctgaataata atatgaaaat attacaaata tttggctggt gttattggtg taatcggttt
    19261 cagtagtgat gataatttgc gataaaacgt gttgaggaag aatgatgtta ttgtgcgggc
    19321 agctttttgc cggatgcggc gtgaatgcct atccaccgcg gtgaggtaaa agaaaaaggc
    19381 cagcgcgagg ctggcctttg aaagcaggtg aagaaagatt acttcagacc ggcagcatcg
    19441 cgcagcagct gcgctttgtc ggttttttcc cacgggaaat gttcacgacc aaagtgaccg
    19501 tatgctgcgg tttctttgta gatcgggtgc agcagatcca gcatctgaat cagaccgtat
    19561 gggcgcaggt cgaagaactc acgtaccagc agagtcagtt gttcagaagg cactttctca
    19621 gtaccgaaag tttctaccat gatggaggtc ggttcagcca cgccgattgc gtaggaaacc
    19681 tgaatttcac aacgatcggc caggccagca gcaacgatgt ttttcgcgac ataacgtgct
    19741 gcgtaggctg cggaacggtc cacttttgat ggatctttac cagagaatgc tccgccaccg
    19801 tgacgtgcca tgccgccgta ggtatcaacg ataattttac gaccagtcag accgcagtca
    19861 cccatcgggc caccgataac aaaacgaccg gtcgggttga tgaagaatgt ggtggcagaa
    19921 gtcagccatt cagcgggcag aattggcttg atgatctctt ccattaccgc ttcttgcagc
    19981 gatttctggt cgatctcttc agagtgctga gtggaaagca cgacagcatc aataccaacg
    20041 attttgccgt cgtcatactg gaaagtcacc tggcttttcg cgtccgggcg cagccacggc
    20101 agagtgccgt ttttacgcac ttcagcctga cgctgtacca gacggtgtgc ataggtgata
    20161 ggtgctggca tcagcacgtc ggtttcatta gttgcgtagc caaacatcag accctggtca
    20221 cccgcgccct gttccagcgg atcggcacgg tcaacgccct ggttgatgtc aggagactgt
    20281 ttgccgatag cgctcagaac cgcacaggag ttagcgtcaa agcccatgtc ggaatgcaca
    20341 tagccaattt cgcgaacggt gttacgggtg atctcttcga tgtctaccca ggcgctggtg
    20401 gtgatttcgc cgccaactaa aaccatgccg gtttttacgt aggtttcgca agcaacgcgt
    20461 gctttcggat cctgttcgag gatcgcgtct aaaacggcat cagagatttg gtcagcaatt
    20521 ttgtcaggat gcccttcaga gacggactcg gacgtaaaaa ggtgttttgc catatttaat
    20581 atcacctaaa gagaatttgg ttagctcaaa ctgttgtgtg gattttctgt ggtagcggat
    20641 cctaccacga ctctgcaggt taaaaacact ggcagtctga gtgttaatcg gtatggatgg
    20701 attaacatct ggatggctat tttaggtcaa ttcttcaccc gatttccact tttttttgaa
    20761 tcgtgtctca ttctgttaaa aacgtggctg gaaatttttt ctgacaatgc cggcattctg
    20821 cgtatttata ttttgcaatt ttctgccatt gtggggtata aaacgcggcg cgcggcttaa
    20881 ataaaaagca cacgacgttt ctttcgtgtt gccacttcca gccgggttga aatcagagtt
    20941 ttggcttgtg ggttcgtctt aacaggcggc cgtggaggtg atacgaaata atgaaccgta
    21001 gtctgctgct taacctgtct caccgttctg gtgaagattc gttccccgca ctctgcatct
    21061 ctgctttgca tacctgccga tgttataccc atctcggcgc ttctcaggat tcaagagctg
    21121 gttacagtta ctgaggactg aacaagggcg ctcttgtaaa aacaagagtt ttctcgtggt
    21181 ttcgccgaac tgtcacactt acgttcggtt atgtgcttaa taatgttatg aaaaagaaac
    21241 cggttgcgca gttggagcgt cagcattcac tgctggaaaa tccatgtgct tatgggttgt
    21301 tatcgcagtt ccaggctgcg atagtcgtta actgttttac acttaataaa ataatttgag
    21361 gttcgctatg tctgacgaca tgtctatggg tttgccttcg tcagcgggcg aacacggtgt
    21421 actacgctcc atgcaggagg ttgcaatgag ctcccaggaa gccagcaaga tgctgcgtac
    21481 ttacaatatt gcctggtggg gcaataacta ctatgacgtt aacgagctgg gccacatcag
    21541 cgtgtgcccg gacccggacg tcccggaagc tcgcgtcgat ctcgcgcagt tagtgaaaac
    21601 tcgtgaagca cagggtcagc gtctgcctgc actgttctgt ttcccacaga tcctgcagca
    21661 ccgtttgcgt tccattaacg ccgcgttcaa acgtgcgagg gaatcctacg gctataacgg
    21721 cgattacttc cttgtttatc cgatcaaagt taaccagcac cgccgcgtga ttgagtccct
    21781 gattcattcg ggcgaaccgc tgggtctgga agccggttcc aaagccgagt tgatggcagt
    21841 gctggcacat gctggcatga cccgtagcgt catcgtctgc aacggttata aagaccgcga
    21901 atatatccgc ctggcattaa ttggcgagaa gatggggcac aaggtctatc tggtcattga
    21961 gaagatgtca gaaatcgcca ttgtgctgga tgaagcagaa cgtctgaatg tcgttcctcg
    22021 tctgggcgtg cgtgcacgtc tggcttcgca gggctcgggt aaatggcagt cttccggcgg
    22081 ggaaaaatcg aagttcggcc tggctgcgac tcaggtactg caactggttg aaacgctgcg
    22141 tgaagctggg cgtctcgaca gcctgcaact actgcacttc cacctcggtt cgcagatggc
    22201 gaatattcgc gatatcgcca cgggcgttcg tgaatccgcg cgtttctatg tggaactgca
    22261 caagctgggc gtcaatattc agtgcttcga cgtcggcggc ggtctgggcg tggactatga
    22321 aggcacccgt tcgcagtctg actgctccgt aaactacggc ctcaatgaat atgccaacaa
    22381 catcatctgg gcgattggtg atgcgtgtga agaaaacggt ctgccgcatc cgacggtaat
    22441 caccgaatcg ggtcgtgcgg tgactgcgca tcacaccgtg ctggtgtcta atatcatcgg
    22501 cgtggaacgt aacgaataca cggtgccgac cgcgcctgca gaagatgcgc cgcgcgcgct
    22561 gcaaagcatg tgggaaacct ggcaggagat gcacgaaccg ggaactcgcc gttctctgcg
    22621 tgaatggtta cacgacagtc agatggatct gcacgacatt catatcggct actcttccgg
    22681 cacctttagc ctgcaagaac gtgcatgggc agaacaactc tatctgagca tgtgccatga
    22741 agtgcagaag caactggatc cgcaaaaccg tgcgcatcgt ccgataatcg acgaactgca
    22801 ggaacgtatg gcggacaaaa tgtacgtcaa tttctcgctg ttccagtcaa tgccggacgc
    22861 atgggggatc gaccagttgt tcccggttct gccgctggaa gggctggatc aagtgccgga
    22921 acgtcgcgct gtgctgctgg atattacctg tgactctgac ggtgctatcg accactatat
    22981 tgatggtgat ggtattgcca cgacaatgcc aatgccggag tacgatccag agaatccgcc
    23041 gatgctcggt ttctttatgg tcggcgcata tcaggagatc ctcggcaaca tgcacaacct
    23101 gttcggtgat accgaagcgg ttgacgtgtt cgtcttccct gacggtagtg tagaagtgga
    23161 actgtctgac gaaggcgata ccgttgcgga tatgctgcaa tatgtgcagc tcgatccgaa
    23221 aacgctgtta actcagttcc gcgatcaagt gaagaaaacc gatcttgatg ctgaactgca
    23281 acaacagttc cttgaagagt tcgaggcagg tttgtacggt tatacttatc tggaagatga
    23341 gtaagtccgt attacttgaa tccgcttaat ttagcggtga taatccgcca caatttattg
    23401 tgacaaatcc aacccttcct cgtcgggcct aacgacgcgg aagggttttt ttatatcgac
    23461 tttgtaatag gagtccatcc atgagcacct taggtcatca atacgataac tcactggttt
    23521 ccaacgcctt tggtttttta cgcctgccga tgaacttcca gccgtatgac agcgatgctg
    23581 actgggtgat tactggtgtg ccgttcgata tggccacttc tggtcgtgcg gggggacgcc
    23641 acggtccggc agcgatccgt caggtttcga cgaatcttgc ctgggaacac aatcgcttcc
    23701 cgtggaattt cgacatgcgt gagcgcctga acgtcgtgga ctgcggcgat ctggtatatg
    23761 cctttggcga tgcccgtgag atgagcgaaa aactgcaggc acacgccgag aagctgctgg
    23821 ctgccggtaa gcgtatgctc tctttcggtg gtgaccactt tgttacgctg ccgctgctgc
    23881 gtgctcatgc gaagcatttc ggcaaaatgg cgctggtaca ctttgacgcc cacaccgata
    23941 cctacgcgaa cggttgtgaa tttgaccacg gcaccatgtt ctataccgcg ccgaaagaag
    24001 gtctgatcga cccgaatcat tccgtgcaga ttggtattcg taccgagttt gataaagaca
    24061 acggttttac cgtgctggac gcctgccagg tgaacgatcg cagcgtggat gacgttatcg
    24121 cccaagtgaa acagattgtg ggtgatatgc cggtttacct gacctttgat atcgactgcc
    24181 tagatcctgc tttcgcgccg ggaaccggta cgccagtgat tggcggcctg acctccgatc
    24241 gcgccattaa actggtacgc ggcctgaaag atctcaacat tgttgggatg gacgtagtgg
    24301 aagtggctcc ggcatacgat cagtcggaaa tcaccgctct ggctgcggcg acgctggcgc
    24361 tggagatgct gtatattcag gcggcgaaaa agggcgagta agcaccagat gcgatgcgca
    24421 cgggtaaaac gtgccattaa tgtcggatgc ggcgtgaacg ccttatccga cctacgttcg
    24481 gcacccgtag gccggataag atgcgccagc atcgcatccg gcaatgcgca caaggtaaca
    24541 aatgtgccat taatgtcaga tgcggcgtga acgccttatc tgacctacgt tcgacaccac
    24601 caggctttac ttaatcccat ccgcgctcat gcgatcgcga atatgctggg cgcgttcggc
    24661 ggatgccgga tggtcgtcaa acattgagct ttggcggcct tcttccagtt tcgccagttt
    24721 ttcaaagctg gtggcaagac ctgccgggct gatgccgcgt tggcgcagaa gatcgtaaga
    24781 ataatcatcg gcttctgctt cctggcgctg ggagaattgc gaattgacta atttctcgcc
    24841 cagatcacca agttgtgatt gagataaact gccgacaatc ccgcccgcag aggccgcagc
    24901 tactcgcacg gcatttgtac caagcgccac ctgcatccct ttcttcacat ggcctaacgc
    24961 cacgtgcccc atctcgtgac cgatcaccgc ttcgacttcg ttatccgtca tcatatccat
    25021 cagcccgcta tagacgcgga tacagccgtt agccattgca aaggcgttca catccttcgc
    25081 catatacact ttgtaattca ccggctgacc gttgatattg ttgcctagcg cattggcaat
    25141 agttgtcaga cgtttagcgt attcgctatt ggctggcgca atcgtcgcct tgctgtccat
    25201 ctcctgacat gcctgatcgc tcagggtttt cacctgcgca tcactcaaac tgtaagcctg
    25261 aaaagcttcc gctcctgatg agagcagtcc gttggagtcc atattctggc aaccagtcag
    25321 taccgttgcc acgctcattg ctaccaataa ggcgcgaatt ttcatgtttt ctcttccgca
    25381 caaggtcagg attattctaa aaatgcgccg tttgcaggtg aatcgacgct cagtctcagt
    25441 ataaggaaaa gcgcagcgga cgggcgagta gattgcgcaa catgcgagca tgatccagag
    25501 atttctgaag cggcaaaagg atgttccatg tacatgacgc gcggcttgcg gtaaattgtt
    25561 ggcaaatttt ccggcgtagc ccaaaacgcg ctgtcgtcaa gtcgttaagg gcgtgccctt
    25621 catcatccga tctggagtca aaatgtcctc acgtaaagag cttgccaatg ctattcgtgc
    25681 gctgagcatg gacgcagtac agaaagccaa atccggtcac ccgggtgccc ctatgggtat
    25741 ggctgacatt gccgaagtcc tgtggcgtga tttcctgaaa cacaacccgc agaatccgtc
    25801 ctgggctgac cgtgaccgct tcgtgctgtc caacggccac ggctccatgc tgatctacag
    25861 cctgctgcac ctcaccggtt acgatctgcc gatggaagaa ctgaaaaact tccgtcagct
    25921 gcactctaaa actccgggcc acccggaagt gggttacacc gctggtgtgg aaaccaccac
    25981 cggtccgctg ggtcagggta ttgccaacgc agtcggtatg gcgattgcag aaaaaacgct
    26041 ggcggcgcag tttaaccgtc cgggccacga cattgtcgac cactacacct acgccttcat
    26101 gggcgacggc tgcatgatgg aaggcatctc ccacgaagtt tgctctctgg cgggtacgct
    26161 gaagctgggt aaactgattg cgttctacga tgacaacggt atctctattg atggtcacgt
    26221 tgaaggctgg ttcaccgacg acaccgcaat gcgtttcgaa gcttacggct ggcacgttat
    26281 tcgcgacatc gacggtcatg acgcggcatc catcaaacgc gcagtagaag aagcgcgcgc
    26341 agtgactgac aaaccgtccc tgctgatgtg caaaaccatc atcggtttcg gttccccgaa
    26401 caaagccggt actcacgact cccacggtgc gccgctgggc gacgctgaaa ttgccctgac
    26461 ccgcgaacag ctgggctgga aatatgcacc gttcgaaatc ccgtctgaaa tctatgctca
    26521 gtgggatgcg aaagaagcag gccaggcgaa agaatccgca tggaacgaga aattcgctgc
    26581 ttacgcgaaa gcttatccgc aggaagccgc tgaatttacc cgccgtatga aaggcgaaat
    26641 gccgtctgac ttcgacgcga aagcaaaaga gttcattgct aaactgcagg ctaacccggc
    26701 gaaaatcgcc agccgtaaag cgtctcagaa tgctatcgaa gctttcggtc cgctgttgcc
    26761 ggaattcctc ggcggttctg ctgacctggc accgtctaac ctgaccctgt ggtctggttc
    26821 taaagcaatc aacgaagatg ctgcgggtaa ctacatccac tacggtgttc gcgagttcgg
    26881 tatgaccgcg attgctaacg gtatctccct gcacggtggt ttcctgccgt acacctccac
    26941 cttcctgatg ttcgtggaat acgcacgtaa cgccgtacgt atggctgcgc tgatgaaaca
    27001 gcgtcaggtg atggtttaca cccacgactc catcggtctg ggcgaagatg gcccgactca
    27061 ccagccggta gagcaggtcg cttctctgcg cgtaaccccg aacatgtcta catggcgtcc
    27121 gtgtgaccag gttgaatccg cggtcgcgtg gaaatacggt gttgagcgtc aggacggccc
    27181 gaccgcactg atcctctccc gtcagaacct ggcgcagcag gaacgaactg aagagcaact
    27241 ggcaaacatc gcgcgcggtg gttatgtgct gaaagactgc gccggtcagc cggaactgat
    27301 tttcatcgct accggttcag aagttgaact ggctgttgct gcctacgaaa aactgactgc
    27361 cgaaggcgtg aaagcgcgcg tggtgtccat gccgtctacc gacgcatttg acaagcagga
    27421 tgctgcttac cgtgaatccg tactgccgaa agcggttact gcacgcgttg cggtagaagc
    27481 gggtattgct gactactggt acaagtatgt tggcctgaat ggcgctatca tcggtatgac
    27541 caccttcggt gagtcagctc cggcagagtt gctattcgaa gagttcggct tcaccgtcga
    27601 caacgtcgtt gcgaaagcaa aagaactgct gtaattagca tttcgggtaa aaaggtcgct
    27661 tcggcgacct tttttattac cttgatatgt ccgtttgcgg acaagcaata gataaagcgt
    27721 gttgcagatc acaaatattt atatgcaata aatatcaatt atgtaatatg catcacgata
    27781 tgcgtattga catttgttgt tatatctata actcaatgtt atataagaaa ttaataattc
    27841 actgttttca aaacaccggt ttccctgctc aattgctttc attaaaccgc acgagtattt
    27901 tatttttacc gccggacggt accctaaaaa taaaataagg ataatttatg cggcttagtg
    27961 actattttcc agaatcatca atctcagtta tacattcagc aaaagattgg caggaagcta
    28021 tcgatttctc gatggtatca ttgctggata aaaactatat cagcgagaat tacattcagg
    28081 caattaaaga ttccaccatt aacaatggcc cttattatat tctcgcacca ggcgtggcaa
    28141 tgcctcatgc gcgaccggaa tgtggggcgc ttaaaaccgg gatgtctttg acattacttg
    28201 aacaaggtgt ttattttccg gggaatgacg aaccaattaa attactcatc ggactctctg
    28261 ctgccgatgc cgattcgcac attggcgcta ttcaggcgtt aagtgaatta ctgtgcgaag
    28321 aagaaatact cgaacaactc ttaacagcat catcagaaaa acaattagcg gacattatca
    28381 gccacggata attactctct cctctacagg ataatattat ggaaaacaag tctgctcgtg
    28441 caaaggtcca ggcttttggg ggctttttga ctgcaatggt catccccaat attggtgctt
    28501 ttattgcctg gggttttatt actgcgttat ttattcccac cggttggctg cctaacgaac
    28561 atttcgccaa aattgtcggc ccgatgatta cctatttatt gcccgtgatg attggttcta
    28621 caggtggtca tctggtcggc ggtaaacgcg gggcggtcat gggcggaata ggtactattg
    28681 gtgtgatcgt tggcgcagag atcccgatgt tccttggctc aatgatcatg gggccgctcg
    28741 gtgggttggt cataaaatat gtcgataagg cactggaaaa acgcatacct gccggttttg
    28801 agatggttat caataacttc tcattaggta tcgcggggat gctcctttgt ctgctgggtt
    28861 ttgaagtgat cggcccggcg gtgttaattg ccaatacttt cgtcaaagag tgtatcgagg
    28921 cgctggtaca tgcgggttat ctgcctctgc tgtcagtcat caatgaaccg gcgaaagtgc
    28981 ttttccttaa taatgcgatc gatcagggcg tctattatcc gctgggaatg caacaggctt
    29041 cggttaacgg taaatccatc ttctttatgg tggcctctaa cccaggtccg ggcctggggc
    29101 tgctgctggc gtttaccttg tttggtaaag ggatgagtaa acgttctgcg cccggggcga
    29161 tgattattca cttcctcggt gggatccacg aactgtattt cccatatgtg ctgatgaagc
    29221 cgctgactat tattgccatg attgcgggcg gtatgtctgg tacctggatg tttaacttac
    29281 tggacggtgg tctggtggct ggcccaagtc tggggtctat ctttgcttac ctggcactga
    29341 cgccgaaagg ctcgttcctg gcgacaattg ccggtgttac ggtaggtacc ctggtgtcct
    29401 ttgctattac ttcgctgata ctgaagatgg aaaaaacggt ggaaacggag agcgaagatg
    29461 agtttgctca gtcagccaat gcggttaagg cgatgaaaca agagggtgca ttctcgttaa
    29521 gcagggttaa gcgtatcgcc tttgtttgcg atacggggat gggctccagt gcgatgggcg
    29581 cgaccacctt ccgtaaacgc ctggaaaaag cggggctggc aatagaagta aaacattacg
    29641 cgatagaaaa cgtgcctgcg gatgccgata tcgtcgtcac tcacgccagt ctggaagggc
    29701 gcgtgaaacg tgtgacggat aaaccgctga tattgattaa taactatatt ggcgatccaa
    29761 aactcgacac tttatttaat caattaaccg ccgaacataa acactgatta cagaggtaaa
    29821 aatgaaaacc aaagttgctg ctatttatgg caagcgggat gtccgtctgc gcgaatttga
    29881 actgccagaa attaccgata atgaactgtt agtgagtgta atttctgaca gcgtctgttt
    29941 atcgacctgg aaagcggcgt tactcggtag tgaacataaa cgcgtacccg acgatttaga
    30001 aaatcatccg gtcattaccg ggcatgaatg tgccggggtt attgtcgaag tgggtaaaaa
    30061 tctcactggc aaatataaaa aaggccagcg ttttgtattg caaccggcga tggggttacc
    30121 aagcggatat tcagcaggct acagctacga atattttggc ggtaacgcca cctatatgat
    30181 tattcccgaa atcgccatta atttgggctg cgtattaccg tatcacggct cttattttgc
    30241 tgcggcgtcg ctggtagagc ctatgtgctg cattattggt gcttatcatg ccaattatca
    30301 caccacgcaa tatgtttatg agcatcgcat gggcgtcaaa cctggcggca atattgcact
    30361 gctggcgtgt gcgggtccga tgggcattgg cgctatcgat tacgccatta acggtggcat
    30421 acaaccgtca cgggtggtgg tggtcgatat cgacgacaaa cgcctggcgc aggtgcagaa
    30481 gctgctgccg gtggatctgg cggccagtaa aggcattgag ctggtgtatg tgaataccaa
    30541 agggatgagc gatccggtcc agacgctgcg ggcgctgaca ggagatgtcg ggttcgatga
    30601 catttttgtt tatgcggcgg tgcctgctgt cgttgagatg gctgacgaat tactggcgga
    30661 agatggctgt ctgaacttct ttgccgggcc gacggataaa aacttcaaag tgccgtttaa
    30721 tttctacaac gtccattaca acagcacgca cgtagtcggt acatccggcg gttcaacgga
    30781 cgacatgaaa gaggcgattg cgttaagcgc cacggggcag ttgcagccgt cctttatggt
    30841 cacgcatatc ggtgggctgg atgcggtgcc agataccgtg ctcaatctgc cggatatccc
    30901 tggcggtaaa aaactcattt ataacggcgt gaccatgccg ctcactgcca ttgccgattt
    30961 tgccgaaaaa ggcaaaaccg atccgctatt taaagagttg gcgcggctgg ttgaggaaac
    31021 gcacggcatc tggaatgaac aggccgagaa atatctgctg gcacaatttg gcattgatat
    31081 cggggaggcc gcgcaatgat gtccctggcg tggccattat ttcgcgttac ggaacaggca
    31141 gcgttggctg cctggccgca aaccggatgt ggcgacaaaa ataaaattga tggcctggcg
    31201 gtcaccgcga tgcgccaggc attaaacgac gtcgcttttc gtggacgagt ggttatcggc
    31261 gaaggagaaa ttgaccatgc gccgatgctg tggattggcg aagaggtggg caaaggcgat
    31321 gggccagaag tcgatatcgc ggttgatccc attgaaggca cgcggatggt ggcgatgggg
    31381 cagagcaatg cgctggcggt catggctttc gcccctcggg atagcctgtt acatgcgccc
    31441 gatatgtata tgaaaaagct ggttgttaat cgactggctg ccggggtgat tgatctgtct
    31501 ttgcctctgg cggacaactt gcgtaacgtg gcgcgggcgt taggtaaacc gctggacaag
    31561 ctgcgcatgg ttacgctgga taaaccgcgc ctgagtgccg cgattgagga agcaacacag
    31621 ctgggcgtga aggtttttgc cctgccggat ggcgatgtcg ccgccagcgt gctgacctgc
    31681 tggcaggata atccttacga tgtgatgtac accatcggcg gtgcgccaga aggcgtgatt
    31741 tctgcctgtg ccgttaaagc attaggcggg gatatgcagg ccgagctgat tgacttttgt
    31801 caggctaaag gggattacac ggaaaatcgg cagattgcag agcaggagag caagcgttgc
    31861 aaggcaatgg gcgttgacgt taaccatgtg tactcgctcg atgaactggt aagggggaac
    31921 gatatcctct ttagcgctac gggcgtgacg ggcggcgagt tggtgaacgg tatccaacag
    31981 acggcgaatg gggtgcggac gcagacatta ctgatcggcg gcgcggacca aacgtgtaat
    32041 ataatagact ccctgcattg atggtgatct atcggaagac caatggcgaa gctgacagaa
    32101 gatgatgtgc ttgagcaact ggatgcacag gacaatttat tttcatttat gaaaactgcg
    32161 cattctattt tgctccaggg gatacgccag tttctgccgt cgctgtttgt cgataacgat
    32221 gaagagatcg tggaatatgc agtgaagccg ttactcgccc aaagcggccc gcttgacgat
    32281 attgatgttg cgctgcgttt gatttatgcg ctggggaaaa tggataaatg gctgtacgcc
    32341 gatatcacgc atttttccca gttctggcat tacctgaacg aacaggatga aacgcccgga
    32401 tttgccgatg acatgacctg ggattttatc agcaacgtca atagcataac ccgcaatgcg
    32461 atgctctatg acgcgttgaa agcgatgaag ttcgccgatt tcgccgtctg gtcagaggcg
    32521 cgttttagcg ggatggtcaa aacggcgctg acgctggcag taacgacaat cttaaaggaa
    32581 ttaacgccgt gaaaattgaa ttaacggtga atgggctgaa gatacaggca cagtaccaga
    32641 acgaagagat tgaaaatgta cataaaccgt tgctgcgtat gctggcggcc ttacagacgg
    32701 taaatccgca gcggcgtacg gtggtttttc tttgcgctcc gccggggacg ggtaaatcta
    32761 ccctaaccac cttctgggaa tatctcgcgc aacaagaccc ggagctgccc gctattcaga
    32821 cgctcccgat ggatggtttt caccattaca atagctggct ggacgcgcat caattgcgcc
    32881 ccttcaaagg cgcaccagag acatttgacg ttgcgaaact ggcggaaaat ctgcgccagg
    32941 tggtggaagg ggattgtacg tggccgcagt acgatcgaca aaagcatgat cctgttgaag
    33001 atgcgttgca cgttaccgca ccactcgtca tcgtcgaagg aaactggttg ttgctggacg
    33061 acgagaagtg gtgccagctt gcgcaatttt gtgatttctc gatctttatc aacgcgccag
    33121 ctactgcgtt gcgggagcgt ctggtggggc gcaagctggc gggaggggta tcgctggcag
    33181 atgcagaagc cttttatgac cgtaccgacg ggccgaatgt tcgccgggtg ctggaagaga
    33241 gtctgcctgc aaatttgacc ttaatgatga ccgctacggg tgaatatcgt ctggtggatt
    33301 aacgttcctg attacaccat cttccagtcg caccacacga gagaaatgac gccgggtaaa
    33361 tgcggcgtca tgactgattg ctaccacgct cgtgcctcgc tggcggcact tctccagcca
    33421 gctttcaaac acgctcaacc aattttcgtc aaaatcccga ctcggctcgt ccagcagtaa
    33481 tagtggcgga gagagtgctt ccaggcaggc gacggcgacc atccgtcgct gcgcactatg
    33541 cagatccaac gggtgcgagt tggcagtgtc tgctaactga caacattgca gggcagcatg
    33601 ggtacgttga gtgatttcat ccgccgggca tttttgcagt ttcaaaccaa atgcgatctc
    33661 gtcagcgacg gtgctgtgaa aaagttggtt ttccgcttcc tgaaacagta cgccaacctt
    33721 tgccgcgcgc tggcggtttt tcaggttttt catcgcctgt tgttgcagca taaccgtacc
    33781 ggctgtgggc gtaagaagac ctgccattac tcgtaacagc gtcgatttcc ctgcgccatt
    33841 gtcaccggtc agcgccaacc attcaccttg tttgagttgc agagaaatgt cgcaaagaca
    33901 atccgttgcc gcgccaggcc agcgataaga tatctgattt aacgttaaca tagtggctgg
    33961 agcgctccgt tttgcaattg ccacgcttgc tggcagtagt tcaggaaagg tgtgcgatga
    34021 cgttcaaaaa gaataatcag cgaaccacgt tcaaacgccc agtgttgtaa gcgctgcaac
    34081 agcatttcgc tggcctgcgg cgtcaggcgg ctaaaggctt catcaagaat taagagcttt
    34141 ggctgcatcg cgatggcgca ggcgatgacc acgcgctgtg tctctccacc ggagagtgtt
    34201 gccgggtgac gatggcgcaa cggctggcac tcggtcagag tcagggcggc atcaatccgc
    34261 gccataatct ctgcttcagc aagacacaga ttttctggcc caaaggcaac ttcttcttcc
    34321 acgctaaagg tacagccgga gagctgcaaa tagggcgatt gctggacgag ctggatggtg
    34381 gcggattgtt cattaagcgg gagatgccca atgggcgtac cgaggagcgt ccccgtgcct
    34441 gttatctctc ctggcagaaa gtccggatac cagcccgcca tcagctgtgc cagcgtactt
    34501 ttgccactgc cgttgtcacc aaagatggcg accatccccg gtttgacata gtgaaagtca
    34561 taacagaacg gaggatgcgt tgagtgtgtc gggcaataac ggaactgttc taacgtaacc
    34621 atatccacgc tccgaattct gtcagcatca gcaagatcat ggtgtaacgc gctacgcgtt
    34681 gtagggtgct atcggctggt gcccacaacg ttgttcgtcg gttgtggatc cgaaatgccc
    34741 gcatatccag cgccgcacca cggacagcca gatcgttaag cgcattgtgt gttagcggaa
    34801 taattaacgc gggcatcgca cgtaaacgct gataccagcc ctcatccagc ggcacgccgc
    34861 gggcacgctg cgcttcatga ataatcgcta attgccgttt taactgctca acgaccaata
    34921 acggcccggc aaacagataa gcgacgcctg gcggcaggcg agaagcaaac agagcgcgaa
    34981 taaaacattg cacggggacg tactgcatcc acaactgtga ggttgaaaca atcgccagaa
    35041 tccgcaacca gagcgtaata gcatgcgacc accgttctgg cgagcgtggc gtgccgctta
    35101 gccattctgg tagccagcca ccgtgtacca gccacagccc ggctcccagc gagaacatca
    35161 gccagacgac atattttgcc cgccgccgcg tggcctttag cgcaataagg cagaaaaagg
    35221 tcgccgcgct atagatcggc aaaatggtct gcgcgggcag gataagcgtg gtgcaggccg
    35281 ccaatgccca cagtattaat gaggtaaatg gatgcattta gcgcacggca gccattgccg
    35341 gaaaatggcg cgtggtgcga atcggcagct ggcgcagtaa aagccagaca atcaccgctg
    35401 taagaatttt atcgaccagg ttcgcgccta tcaccgtaat cgccaccgac tccaccaggt
    35461 tttgccccat cgagtgcatc caggcaacga acaaatcggc tccgctaccg gtgacaccgc
    35521 cgaacagcgc agtacgcagc ggtacagcga cgaccgttac cgcaagcgta ataatcacgc
    35581 cgctgacaac gacttttggc agggtgcgaa accaacccgc tcgcgccagc caaccggcga
    35641 ccaggccgat gaccatcgcg acgggtgcaa atgcggcggc gatcgggtcg gtcagcaatc
    35701 cccagagtaa attggtcagt aagccggtca gcattccgat caccggacca agcagtaccg
    35761 cgctaataag tgtgccgatg gagtcgagaa atataggtaa tttgaccatg ctggccagtt
    35821 gcccgccgat catattgatg gcgatagata taacgatcaa caccagtgcc tgactggaaa
    35881 agtggctacg cgccataaga aaacctcttt gaaagtagtt atttaacggg ggaaatatgc
    35941 aactcgtcgt aaccagaaag cgcgcaaggt tggcggctaa acgccagttc ctcaaggcta
    36001 ccgatcacca gttcaagcgt ggtccgcacg gtacagccgg gcatcatatg accgccaagc
    36061 atcgtgccgt gtggatcgga aacgcagaga tgaagatgct caccactctg ttccagcgtg
    36121 ccgtttagtg agatcacttc gaatgtaccg ttcaggagcg tggtgccttc ttgcctggca
    36181 tagcgcaagg cgacgtcagt caggctaccg gtacagcctg caatccaggc ggcatgaagt
    36241 tgatgctgct gtgcaaaagc gtgtagctgg gaaaaaactt cctgcccggg gaggaggcgc
    36301 agtgcgtaaa agcgtgcgga ggaagaatat gggtagggca atgtcatcat tggagtactc
    36361 cgaaactcgg acgtattgcg gataatatcg acgctgcatc agtcatattc tgatataagt
    36421 cagggtttgt gacggcacaa cgaaaagatt ttgctacgct tattcgtgat tctgcaaagt
    36481 ggaataaatt ctacaggggc ggggctgaaa acgtgacgta agtcagataa ttgctttctt
    36541 tgactggaca atcattcctt ttattccacg tttcgcttat cctagctgaa gcgtttcagt
    36601 cgattaaatg ttcgacaatt aaccaatcag tcgcagtttg cgacaggtaa ggtttccccg
    36661 gacgatttgc tggattactc tgtctggcaa atttgctcag ggaaaacctt gcaggagatc
    36721 tatgaccgta cgcgtagcga taaatggctt cggtcgcatc gggcgtaatg tggttcgtgc
    36781 tttgtatgaa tccggacgcc gggcggaaat taccgtggtg gcaatcaacg aactggcgga
    36841 tgctgcgggc atggcgcatt tgttgaaata tgacaccagc catggccgtt ttgcatggga
    36901 agtacgacag gaacgcgatc aactttttgt tggtgatgac gccatccgcg tattgcatga
    36961 acgttcactg caatcgctcc cctggcgtga acttggcgtt gatgtagtcc tcgactgcac
    37021 cggcgtatat ggctcccgcg agcatggcga agcgcatatt gccgccgggg ccaaaaaagt
    37081 gctcttttca catcctggca gtaacgatct cgacgcgacc gttgtttacg gcgtcaatca
    37141 ggatcaactt cgtgcggaac accgcatcgt ttctaacgct tcctgtacca cgaattgcat
    37201 aattcccgtc atcaaattgt tagatgatgc gtacggtatt gagtccggca ctgtgaccac
    37261 aattcactcc gccatgcacg atcaacaggt tattgatgca taccatcctg acctgcgtcg
    37321 cacccgggca gccagccagt cgatcattcc ggtcgatact aaactggccg ccggtatcac
    37381 acgatttttt ccgcaattta acgatcgctt tgaagcgatt gcggtacgtg tgccaaccat
    37441 aaatgtgacg gcaatcgatt taagcgtgac ggtgaagaaa cctgtaaaag ccaatgaagt
    37501 caacctgttg ctgcaaaaag cagcacaagg tgcatttcat ggtatagttg actatacgga
    37561 attgccgttg gtctctgtag attttaacca cgatccgcac agtgccattg tcgatggcac
    37621 ccaaacccgg gtcagtggcg cacacctgat caaaacgttg gtctggtgcg ataacgaatg
    37681 gggctttgct aaccgaatgc tcgacacgac gttagctatg gctactgttg ctttcaggta
    37741 agacgcaagc agcgtctgca aaacttttag aatcaacgag aggattcacc atgtctgtaa
    37801 ttaagatgac cgatctggat cttgctggga aacgtgtatt tatccgtgcg gatctgaacg
    37861 taccagtaaa agacgggaaa gtaaccagcg acgcgcgtat ccgtgcttct ctgccgacca
    37921 tcgaactggc cctgaaacaa ggcgcaaaag tgatggtaac ttcccacctg ggtcgtccta
    37981 ccgaaggcga gtacaacgaa gaattctctc tgctgccggt tgttaactac ctgaaagaca
    38041 aactgtctaa cccggttcgt ctggttaaag attacctcga cggcgttgac gttgctgaag
    38101 gtgaactggt tgttctggaa aacgttcgct tcaacaaagg cgagaagaaa gacgacgaaa
    38161 ccctgtccaa aaaatacgct gcactgtgtg acgtgttcgt aatggacgca ttcggtactg
    38221 ctcaccgcgc gcaggcttct actcacggta tcggtaaatt cgctgacgtt gcgtgcgcag
    38281 gcccgctgct ggcagctgaa ctggacgcgc tgggtaaagc actgaaagaa cctgctcgcc
    38341 cgatggtggc tatcgttggt ggttctaaag tatctaccaa actgaccgtt ttggactccc
    38401 tgtctaaaat cgctgaccag ctgattgttg gtggtggtat cgctaacacc tttatcgcgg
    38461 cacaaggcca cgatgtgggt aaatccctgt acgaagctga cctggttgac gaagctaaac
    38521 gtctgctgac cacctgcaac atcccggttc cgtctgatgt tcgcgtagca accgagttct
    38581 ctgaaactgc accggctacc ctgaaatctg ttaacgatgt gaaagctgac gagcagatcc
    38641 tggatatcgg tgatgcttcc gctcaggaac tggctgaaat cctgaagaat gcgaaaacca
    38701 ttctgtggaa cggtccggtt ggcgtgttcg aattcccgaa cttccgcaaa ggtactgaaa
    38761 tcgtggctaa cgctatcgca gacagcgaag cgttctccat cgctggcggc ggcgacactc
    38821 tggcagcaat cgacctgttc ggcattgctg acaaaatctc ctacatctcc actggcggcg
    38881 gcgcattcct cgaattcgtg gaaggtaaag tactgcctgc agtagcgatg ctcgaagagc
    38941 gcgctaagaa gtaaaaaatc acagggcagg gaaacctgcc cttgtttcag cgcgctttta
    39001 gagcacgcat tttttcat
//
LOCUS       DADKRT010000013        37820 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.013, whole genome shotgun sequence.
ACCESSION   DADKRT010000013 DADKRT010000000
VERSION     DADKRT010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 37820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37820
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.013"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..392
                     /locus_tag="JQ356_000598"
     CDS             <1..392
                     /locus_tag="JQ356_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4620784.1"
                     /translation="HYPLICSNKHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEI
                     DEKFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSHRDFLNLKEIKPKHPLPSI
                     KLYISYNKSSLNNLVFSRFIDRLNESF"
     gene            539..2056
                     /locus_tag="JQ356_000599"
     CDS             539..2056
                     /locus_tag="JQ356_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
                     /protein_id="HAY4620785.1"
                     /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML
                     HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS
                     LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
                     AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW
                     YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS
                     GVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEDDRIKAINEIRMAIHQ
                     VSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDK
                     NAMEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQIT
                     AMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK"
     gene            complement(2057..3206)
                     /gene="ybdL"
                     /locus_tag="JQ356_000600"
                     /pseudo
     CDS             complement(2057..3206)
                     /gene="ybdL"
                     /locus_tag="JQ356_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-oxo-acid transaminase"
     gene            3315..4403
                     /gene="hcxA"
                     /locus_tag="JQ356_000601"
     CDS             3315..4403
                     /gene="hcxA"
                     /locus_tag="JQ356_000601"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcxA"
                     /protein_id="HAY4620786.1"
                     /translation="MPHNPIRVVVGPANYFSHPRSFNHLNDFFTDEQLSRAVWIYGKR
                     AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
                     KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
                     NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALA
                     DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
                     KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP
                     VESIHYLPVTLTPDTLRAAFEKVESFKA"
     gene            complement(4413..4610)
                     /locus_tag="JQ356_000602"
     CDS             complement(4413..4610)
                     /locus_tag="JQ356_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY4620787.1"
                     /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(4792..6897)
                     /gene="cstA"
                     /locus_tag="JQ356_000603"
     CDS             complement(4792..6897)
                     /gene="cstA"
                     /locus_tag="JQ356_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
                     /protein_id="HAY4620788.1"
                     /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI
                     YLIAYRFYGLYIAKNVLAVDPKRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG
                     VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRI
                     GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
                     APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA
                     CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
                     MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
                     AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
                     LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC
                     AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG
                     NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP
                     YEPMPENVEEIVAQAKGAH"
     gene            complement(7078..7491)
                     /gene="entH"
                     /locus_tag="JQ356_000604"
     CDS             complement(7078..7491)
                     /gene="entH"
                     /locus_tag="JQ356_000604"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HAY4620789.1"
                     /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT
                     RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
                     QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
     gene            complement(7494..8240)
                     /gene="dhbA"
                     /locus_tag="JQ356_000605"
     CDS             complement(7494..8240)
                     /gene="dhbA"
                     /locus_tag="JQ356_000605"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase"
                     /protein_id="HAY4620790.1"
                     /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY
                     PFATEVMDVADAGQVAQVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAV
                     NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
                     ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
                     ANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            complement(8240..9097)
                     /gene="entB"
                     /locus_tag="JQ356_000606"
     CDS             complement(8240..9097)
                     /gene="entB"
                     /locus_tag="JQ356_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis bifunctional
                     isochorismatase/aryl carrier protein EntB"
                     /protein_id="HAY4620791.1"
                     /translation="MAIPKLQAYALPESHDIPQNKVDWAFELQRAALLIHDMQDYFVS
                     FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
                     PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT
                     ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAAL
                     REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW
                     WKLLSREVK"
     gene            complement(9111..10721)
                     /gene="entE"
                     /locus_tag="JQ356_000607"
     CDS             complement(9111..10721)
                     /gene="entE"
                     /locus_tag="JQ356_000607"
                     /EC_number="2.7.7.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase"
                     /protein_id="HAY4620792.1"
                     /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID
                     GELQLSYRELNQAADNLACTLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
                     ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGE
                     HNLQDAINHPADGFTATASPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC
                     QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT
                     ALVPPAVSLWLQALAEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM
                     AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR
                     GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL
                     LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE
                     CVDSLPLTAVGKVDKKQLSQWLASRASA"
     gene            complement(10731..11906)
                     /gene="entC"
                     /locus_tag="JQ356_000608"
     CDS             complement(10731..11906)
                     /gene="entC"
                     /locus_tag="JQ356_000608"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
                     /protein_id="HAY4620793.1"
                     /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV
                     NGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK
                     QASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA
                     AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR
                     QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH
                     LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC
                     DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVLASSPLGEWRETGVKLSTMLNVFGLH"
     gene            12281..13237
                     /gene="fepB"
                     /locus_tag="JQ356_000609"
     CDS             12281..13237
                     /gene="fepB"
                     /locus_tag="JQ356_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY4620794.1"
                     /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES
                     QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
                     IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
                     EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
                     LEQLGFTLAKLPTGLNASQSQGKRHDIIQLSGENLAAGLNGESLFLFAGDQKDADAIY
                     ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF"
     gene            complement(13241..14491)
                     /gene="entS"
                     /locus_tag="JQ356_000610"
     CDS             complement(13241..14491)
                     /gene="entS"
                     /locus_tag="JQ356_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HAY4620795.1"
                     /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
                     QMMTHSTWLVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN
                     ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV
                     ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR
                     FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAEIGFLYAAIPLGAAIGAL
                     TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT
                     MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV
                     LLLLVLVELRRFRQTPPQVTASDS"
     gene            14602..15606
                     /gene="fepD"
                     /locus_tag="JQ356_000611"
     CDS             14602..15606
                     /gene="fepD"
                     /locus_tag="JQ356_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-siderophore ABC transporter permease"
                     /protein_id="HAY4620796.1"
                     /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAF
                     SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS
                     FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
                     VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN
                     SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGA
                     DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
                     "
     gene            15603..16595
                     /gene="fepG"
                     /locus_tag="JQ356_000612"
     CDS             15603..16595
                     /gene="fepG"
                     /locus_tag="JQ356_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter permease"
                     /protein_id="HAY4620797.1"
                     /translation="MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLETSQVFAALM
                     GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
                     GVLVAMVLFGQDLTAIALAAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
                     FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLE
                     MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW
                     GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
     gene            16592..17407
                     /gene="fepC"
                     /locus_tag="JQ356_000613"
     CDS             16592..17407
                     /gene="fepC"
                     /locus_tag="JQ356_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY4620798.1"
                     /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC
                     GKSTLLRTLSRLMTPAHGHVWLDGEHIKHYASKEVARRIGLLAQNATTPGDITVQELV
                     ARGRYPHQPLFTHWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
                     ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR
                     EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLERTAPSTANS"
     gene            complement(17404..18537)
                     /gene="fepE"
                     /locus_tag="JQ356_000614"
     CDS             complement(17404..18537)
                     /gene="fepE"
                     /locus_tag="JQ356_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen length regulator"
                     /protein_id="HAY4620799.1"
                     /translation="MSSLNIKQGSDAHFSEYPLASPSSNEIDLLNLIEVLWRAKKTVM
                     AVVFAFACAGLLISFILPQKWTSSAVITPAEAIQWQDLEKTFTKLRVLDLDVNIDRGG
                     AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS
                     KKKDEPSLYTSWTLSFTAPTSKEAQTVLSGYIDYISALVVKESIENVRNKLEIKTQFE
                     KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD
                     GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKANVNDVNFTPFKYQLSPSLPVKKD
                     GPGKAIIVILSALIGGMVACGSVLLRYAMASRKQDAMMADHLV"
     gene            complement(18752..22633)
                     /gene="entF"
                     /locus_tag="JQ356_000615"
     CDS             complement(18752..22633)
                     /gene="entF"
                     /locus_tag="JQ356_000615"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin non-ribosomal peptide synthetase
                     EntF"
                     /protein_id="HAY4620800.1"
                     /translation="MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGEVDAPLL
                     ARAVVDGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQ
                     ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW
                     LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGR
                     SASADILRLKMEFTDGEFRQLATQLSGVQRTDLALALTALWLGRLCNRMDYAAGFIFM
                     RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD
                     SGRAAGDEPLFGPVLNIKVFDYQLDIPGVQAQTHTLATGPVNDLELALFPDEHGDLSI
                     EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQINATQV
                     EIPETTLSALVAEQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSV
                     AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF
                     ADVPDLTNLCYNAPLKPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL
                     LWMQNHYLLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF
                     AEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTSV
                     PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGV
                     AGDLYLTGIQLAQGYLGRPDLTASRFIADPFVPGERMYRTGDVARWLDNGAVEYLGRS
                     DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG
                     LPLDTSALQAQLRETLPPHMVPVVLLQLPLLPLSANGKLDRKALPLPELKAQAPGRAP
                     KAGSETIIAAAFASLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVM
                     VASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYI
                     DPQWSIIGIQSPRPNGPMHTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG
                     IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS
                     TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL
                     DIYRQDCAHVDIISPGAFVKIGPIIRATLNR"
     gene            complement(22630..22848)
                     /locus_tag="JQ356_000616"
     CDS             complement(22630..22848)
                     /locus_tag="JQ356_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbtH family protein"
                     /protein_id="HAY4620801.1"
                     /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQ
                     SQESCQQWLEAHWRTLTPANFTQLQEAQ"
     gene            complement(22851..24053)
                     /gene="fes"
                     /locus_tag="JQ356_000617"
     CDS             complement(22851..24053)
                     /gene="fes"
                     /locus_tag="JQ356_000617"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin esterase"
                     /protein_id="HAY4620802.1"
                     /translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS
                     PIKRVWVYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIF
                     SAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQA
                     PEIPAKEIIWKSERLKNSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSL
                     THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTV
                     VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG
                     LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW
                     QPLFHDRS"
     gene            24296..26536
                     /gene="fepA"
                     /locus_tag="JQ356_000618"
     CDS             24296..26536
                     /gene="fepA"
                     /locus_tag="JQ356_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore enterobactin receptor FepA"
                     /protein_id="HAY4620803.1"
                     /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN
                     LQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE
                     NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
                     GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD
                     KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS
                     RQGNLYAGDTQNTNSDAYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHT
                     RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN
                     QQRMKDLSSNTQALTGANTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTP
                     GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
                     CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG
                     QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII
                     PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS
                     ATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM
                     SVNTHF"
     gene            26711..27331
                     /gene="entD"
                     /locus_tag="JQ356_000619"
     CDS             26711..27331
                     /gene="entD"
                     /locus_tag="JQ356_000619"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415115.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin synthase subunit EntD"
                     /protein_id="HAY4620804.1"
                     /translation="MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGR
                     KRKAEHLAGRIAAIYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQ
                     PIGVDIEEIFSAQTATELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEI
                     QTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD"
     gene            complement(27453..27605)
                     /locus_tag="JQ356_000620"
     CDS             complement(27453..27605)
                     /locus_tag="JQ356_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY4620805.1"
                     /translation="MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL
                     AYEPKK"
     gene            28059..29177
                     /locus_tag="JQ356_000621"
     CDS             28059..29177
                     /locus_tag="JQ356_000621"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY4620806.1"
                     /translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSILIDAVKNK
                     ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPF
                     QKWQRQEVCDNERYQRTLENFGYLIQQVTVFGQHVHVGCASGDDAIYLLHGLSRFVPH
                     FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID
                     SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD
                     YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEAL
                     HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD"
     gene            29243..29491
                     /locus_tag="JQ356_000622"
     CDS             29243..29491
                     /locus_tag="JQ356_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 domain-containing protein"
                     /protein_id="HAY4620807.1"
                     /translation="MKHPLETLTTAAGILLMAFLSCLLLPTPALGLTLAQKLVTMFHL
                     MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD"
     gene            29556..29924
                     /locus_tag="JQ356_000623"
     CDS             29556..29924
                     /locus_tag="JQ356_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY4620808.1"
                     /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS
                     ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND
                     SWNLVVDGLAKRDQKRVRPG"
     gene            30018..30671
                     /gene="nfsB"
                     /locus_tag="JQ356_000624"
     CDS             30018..30671
                     /gene="nfsB"
                     /locus_tag="JQ356_000624"
                     /EC_number="1.5.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
                     /protein_id="HAY4620809.1"
                     /translation="MDIISVTLKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQ
                     PWHFIVASTEEGKARVAKSAAGNYVFNERKILDASHVVVFCAKTAMDDAWLKLVVDQE
                     DADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD
                     AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV"
     gene            30779..32026
                     /locus_tag="JQ356_000625"
     CDS             30779..32026
                     /locus_tag="JQ356_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HAY4620810.1"
                     /translation="MQDLISQVGDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
                     LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
                     AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
                     LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESILNLRRMTNIGTFRAYLNEY
                     LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
                     FGLRLHQSPAGNDIRSLAGAFKQ"
     gene            complement(32094..33470)
                     /gene="pheP"
                     /locus_tag="JQ356_000626"
     CDS             complement(32094..33470)
                     /gene="pheP"
                     /locus_tag="JQ356_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HAY4620811.1"
                     /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
                     IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
                     SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
                     EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI
                     MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYICSLVVLLALYPWVEVKSN
                     SSPFVMIFHNLDSNEVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
                     VSHRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
                     RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
                     AFKTLRRK"
     gene            complement(33572..36699)
                     /gene="cusA"
                     /locus_tag="JQ356_000627"
                     /pseudo
     CDS             complement(33572..36699)
                     /gene="cusA"
                     /locus_tag="JQ356_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415107.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter permease
                     subunit CusA"
     gene            complement(36711..>37820)
                     /gene="cusB"
                     /locus_tag="JQ356_000628"
     CDS             complement(36711..>37820)
                     /gene="cusB"
                     /locus_tag="JQ356_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     adaptor subunit CusB"
                     /protein_id="HAY4620812.1"
                     /translation="ERKILFWYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGV
                     RIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTV
                     GDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRL
                     IATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAW
                     LVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAW
                     LQLNTASEPMLLIPSQGLIDTGSEQRVITIDADGRFVPKRVAVFQASQGVTALRSGLA
                     EGEKVVSSGLFLIDSEANISGALERMRSESATHAH"
BASE COUNT         9076 a        10550 c         9627 g         8567 t
ORIGIN      
        1 gtcattaccc tctaatttgt agtaataagc atccgcgaat tactgacaat agcacttatg
       61 aacaaattat ggcagaagag ttcacccaat taatatccaa atcagcagga gttgatgata
      121 ttcaaatgga aatagacgag aagtttatga atcgcaaaat ttcatttcgt ggttcctctt
      181 tgctgacaat aattaatagc attgcagtta cagatttact gggaatagtc ccctatgaac
      241 tttataactc ccaccgtgac tttcttaatt taaaagagat aaaaccaaaa catccgttac
      301 cttcaataaa gctttacatt tcctataata aatcttcttt aaataatttg gtgttctccc
      361 gatttattga ccgtctaaat gagagttttt gatatataac tacagacagc tactataact
      421 ttcatctatt tattcacagc gcgaatgaaa aataaaacac tctgctttac agtgtttact
      481 ttataattaa cagtcttatc tcactgttca ccctgtaacg ttcagagagc gtcttcagat
      541 gtctatttat aaaattcctc ttccgctcaa tattctggaa gctgcacgag agcgtattac
      601 ctggacactc aacaccctac cccgcgtttg tgtctcattt tctggcggca aagactctgg
      661 tttaatgctg catctgacag ccgaacttgc ccgacaaatg ggcaaaaaaa tctgcgtttt
      721 gtttatcgac tgggaggcgc aattctcttg cactattaac tatgttcagt ccctgcgcga
      781 gttgtacacc gatgtcatcg aagagtttta ctgggttgcg ctcccgctta cgacgcaaaa
      841 ttccctttca caataccaac ccgaatggca gtgctgggaa cctgatgtcg aatgggtgcg
      901 tcagcccccg caagatgcga taaccgatcc tgactttttc tgcttttacc agccaggcat
      961 gaccttcgaa caatttgtac gtgagtttgc cgaatggttt tcacaaaaac gtccggcggc
     1021 gatgatgatc ggcatccgtg cggatgagtc ctacaaccgt tttgtcgcca tcgccagttt
     1081 aaataaacaa cgttttgccg acgataaacc atggactacg gccgcaccag gcggtcatag
     1141 ctggtacatt taccccattt acgactggaa agtggctgat atctggacct ggtatgcaaa
     1201 tcatcaaagt ctctgcaacc cactgtataa cctaatgtat caggcaggcg ttcctctgcg
     1261 tcatatgcga atttgcgaac cttttggccc ggagcaacga caaggattat ggctctatca
     1321 cgttatcgaa ccggatcgct gggctgctat gtgcgcacga gtcagcgggg taaaaagtgg
     1381 cggcatttac gccggacatg acaatcattt ctatgggcat cggaaaatcc tcaagccaga
     1441 acatttagac tggcaagaat atgcattatt gctgctcaat agcatgccgg aagatgatcg
     1501 catcaaagcg attaatgaaa tccgcatggc gatccatcag gttagcccct ttcgtgaaga
     1561 gccagtggat tgcgttctgt gggttaaaaa cagccaactt atgcctaatg attacaaccc
     1621 aaacaacgtg gcaccacccg aaaaaaaact gctgcaaaaa tccattgaaa tagatggttt
     1681 tacccaaccc attgtggtca cacatacgga taaaaatgcc atggaaatcg tggatggttt
     1741 tcaccgccat gaaattggta aaggctcatc atcattaaaa ttacgcttaa aaggttattt
     1801 gccggtgacc tgtctggaag gtacgcgtaa tcaacgcatc gccgcgacta ttcgtcataa
     1861 tcgcgctcgt ggacgccatc aaatcaccgc catgtcggaa atcgtccgtg aacttagcca
     1921 gttgggatgg gacgataata aaattggcaa agagctggga atggacagcg acgaagtgct
     1981 gcgcctgaag caaattaacg gcctgcaaga gttgtttgcc gaccgtcaat attcccgcgc
     2041 ctggacggtt aaatagctaa agctggcgca ggcgttcagc tgctgccagc aacgtcgatt
     2101 ccttcttggc aaaacagaga cgaatcagtt tatgtgggaa gggatcggcg caaaacaccg
     2161 acagcggaat cgccgccacg ccgtgctccc gcgtcagcca ctggcaaaac tcaacatcat
     2221 ccagggtaga aacctcgctg taatccacca gcaaaaagta tgtaccttca cacggtaaaa
     2281 tctccagccg gctttcattt aaagcattca ccagaatatc gcgcttctgg cgataaaagt
     2341 ccggtaacgc aagataatgc tcaggttctg cacgtagcat atcagcaagc gccagctgtg
     2401 ccggggtatt caccgaaaag gtcagatact gatgtacctt gcgaatttcg gcgctgatgg
     2461 gcgctggcgc aacacaataa cccactttcc agccggtcat atgatagatc ttgccaaatg
     2521 aagaaaccgc cactgcccgc tcacgcagct gcggatgcgc cagcacactg gcatggccct
     2581 gttgtgaaaa gttgatgtgc tcgtagactt catcgctaat gacaaaaatc tcgtgcccgg
     2641 cgatcgcctg ccacaaagcg gcgaaatcag cctgctgcca gacagttgca ctggggttat
     2701 gcggagtgtt gaggatcacc agtctggtgc gctcgcttaa taatgcggca aattcctgcc
     2761 agtcaaggtg gttgcagtgc catacgcttc actattcccc cagaaagcgc gatggcgggg
     2821 gcgtaactgt catagctggg atcaaaacaa atcacttcat cgccattgcg caccagtgcg
     2881 gtaatcgccg cgtataacgc ttccgtcgcc cctgccgtta cggtgatatc gctatcggca
     2941 tctggttgat agccatacaa acgttccgtt ttctgagcaa tcgcctcgcg caaggcctgc
     3001 acgccggtca tgggcgcgta ttggtttgcc ccctgggcaa cgtggtacgc cagccgctcc
     3061 tgtaaatagc gcggaccatc aaaatcagga aagccttgcg acaggttaat cgcctggtgt
     3121 tgctgcgcca gcgcgctcat ctgggtgaaa atagtggtgc caagttgtgg aagtttgctt
     3181 tgtggaatca gagggttatt tgtcattttt attgtacctg acgaagttgc gtgttgaagg
     3241 cactataaca cgatgctagt atttggcaat caagacgttt agatgtctaa ataaaacaat
     3301 aaggacaaca caacatgcct cacaatccta tccgcgtggt cgtcggcccg gctaactact
     3361 tttcacatcc aagaagtttc aatcacctga acgatttttt cactgatgaa caactttctc
     3421 gcgcggtgtg gatctacggc aaacgcgcca ttgctgcggc gcaaaccaaa cttccgccag
     3481 cgtttggact tccaggggca aagcatattt tgtttcgtgg tcattgcagc gaaagcgatg
     3541 tacagcaact ggcggctgag tccggtgacg atcgcagcgt ggtgattggc gtcggcggcg
     3601 gcgcactgct cgacaccgcg aaagccctcg cccgccgtct cggtctgcca tttgttgccg
     3661 ttccgacgat cgccgctacc tgcgccgcct ggacaccgct ctccgtctgg tataacgatg
     3721 ccggacaggc gctgcattat gagattttcg acgacgccaa ttttatggtg ctggtggaac
     3781 cggagattat cctcaatgca ccgcaacaat atctgctggc ggggatcggt gacacgctgg
     3841 cgaaatggta tgaagcggtg gtgctggctc cgcaaccaga aacgttgccg ctaaccgtgc
     3901 ggctggggat caataatgcg caggccattc gcgacgtctt gttaaacagt agcgaacagg
     3961 cacttgccga tcagcaaaat cagcagttaa cgcaatcatt ttgcgatgtg gtggatgcta
     4021 ttattgctgg tggtgggatg gtcggtggtc tgggcgatcg ttttacgcgt gtggcggcgg
     4081 ctcatgccgt gcataacggt ctgactgtcc tgccgcaaac cgagaagttt cttcacggca
     4141 ccaaagtcgc ttacggaatt ctggtgcaaa gcgccttgct gggtcaggat gatgtgctgg
     4201 cgcaattaac cggggcgtat cagcgttttc atctgccgac tacgctggcg gagctggaag
     4261 tggatatcaa taatcaggcg gagatcgaca aagtgattgc ccacaccttg cgcccggtgg
     4321 agtccattca ttacctgcca gtcacgctga caccagatac gttgcgtgca gcgttcgaaa
     4381 aagtggaatc gtttaaagcc tgacgtgcaa atttagcagc agcgcgcgcc gccttttcca
     4441 ccgtagcgcg cgtcctgccg ctcacggaaa aactcctcgt aggtcatcgg cgtttgatcg
     4501 ggatggttaa cccgcatatg ttcgacatag ttgtcgtaat caggcatacc aatcatcagc
     4561 ttcgccgcct gacctaaata ttttccggct tttgccagtg aatcaaacat cttggcctcc
     4621 gctaaccatg ttgctgaaag agtgccggat gcggcgtgaa cgctttatcc ggcctacaaa
     4681 tgctatcaac gcactcggtc agtcccctcg ccccatcggg gagagggtta gggtgagggg
     4741 gaaccctcgg cactatgcca acattcgcca acatcccccc tcactctgac tttagtgcgc
     4801 gcctttcgcc tgcgctacga tctcctcgac attttccggc atcggctcat acggcgtttc
     4861 tttcgccgtt ggcttcggat ctttcaatgc cgcaagtgcc gtcttaatcg agaacagtgc
     4921 cagaaccacc acgaccacca taaagaagat ggttaacccg gcatccagac ggttgttgaa
     4981 caccagttgc gccagctgtg actcagtata ctgcgacgga atattgccgc tgtcgatcat
     5041 tgcctggaac ttgttagcaa tggccaggaa gccgactttc gcatccgggc taaacgcttt
     5101 ctgccagcca gcggtcaggg tacaaatcag cagccaggcc gttggtacca gcgccaccca
     5161 ggcgtaacgt tgacgtttca tcttgaacaa caccacggca cagagcatca gcgccatccc
     5221 tgccagcatc tggttggcaa taccaaacag cggccacaga gtgttaatac cgcccagcgg
     5281 atcgaccacg ccctgatgga ggaagtagcc ccacgccagt acgcacagcg ccgttgccag
     5341 caggttagca ggcagtgaat cggtccgctt caggccagga gacaccacgc ccagcagatc
     5401 ctgcaacata aagcgcgcag cacgcgtacc cgcatctacc gccgtcagaa taaacagagc
     5461 ttcaaataga atggcgaagt gataccagaa cgccacatcc atcataccac ccagcgcacc
     5521 gtgcaggatg taagccatcc ccaccgccaa cgtcggcgca ccgcccgcac gggaaatgat
     5581 cgactgttca cccacttcgc tggcaatctg gttgagcgta tctggtgtaa tgctaaagcc
     5641 ccagctactc accacctgcg cggcagaagc gaccacatcc gccgtccctg ctggagccag
     5701 caccgccatt gggctgttca tggcaaagta aacgcccgga tcgatgatac aggcggaaac
     5761 cagcgccata atcgccacga aggattccat taacattcca ccgtagccga taaaacaagc
     5821 ctgcccttcg ttcgccagca tcttcggcgt ggtgccggaa gagatcagcg catggaagcc
     5881 agacaccgcg ccacaggcga tggtgataaa caggaacggg aacaggttac cggtccatac
     5941 cgggccagtg ccatcgacaa atttggtcag cgcaggcatg gtcagcgtcg ggcgcataat
     6001 caaaatgcct accgccagac cgacgatcgt cccgattttc aggaaggtag agaggtagtc
     6061 acgcggggcc agcagcaacc acaccggcag caccgccgcc acaaaaccgt aacccaccag
     6121 catccaggtc agctgcacgc cggtaaagtc aaagtacggt gcccaggtcg gactttctgc
     6181 cacccagccg ccagagataa tggcgaaaat caggaatacc agaccgatga ccgacacttc
     6241 accaatacgc cccggacgca gatagcgcag gtagatcccc ataaacagcg ccagcggaat
     6301 ggtgaacgca acggtatacg ttccccacgg gctatgagtc agggctttca ccacgatcat
     6361 cgccagtact gcaaggataa tgaccatgat cataaagcag gccaccagcg ctatcacccc
     6421 ggcggttggc cccatctctt ctttgaccag ctcacccagc gatcgaccgt cacggcgcgt
     6481 agaaacaaac agcaccatga aatcctgcac cgcaccggcg agaaccaccc cggcgagtag
     6541 ccagatcatc cccggcaggt agcccatttg cgctgccagc accggcccaa ccaacggacc
     6601 tgctccggcg atggccgcaa aatggtgacc gaacagcact ttcttgtccg tcggcacata
     6661 gtccagcccg tcgttatggc gcaccgctgg cgtcatacgc ttcgggtcaa ccgccagcac
     6721 atttttggcg atatacaacc cataaaaacg gtaagcgatc agatagatac agaccgacgc
     6781 caccacaatc cacagcgcgt tgatctgttc cccacgattt aaagcaatgt atcccagagc
     6841 aaatgctccc attacagaga gcactgtcca gacgaggtat ttccctgatt tgttcatagt
     6901 tgttatccgt gtgcgtgtcc atagagatgt tacattttgt ttctataaca tctttgtacg
     6961 atttaacaac acggtaacta tgtaaatcgg agttgaaacc aatatttaac ttaacaatgt
     7021 taactcgatc actccgttaa ccgagttttc ctgcaatctc atttaattct gtcgggctca
     7081 tcccaaaact gccgtaccca gccgacaagt gcagcaacgc cgcccctgtt catcgaaaac
     7141 gacgatttcc cagctctgat tttgccgccc aagatgcagc ggctggcaga cgccgcgtac
     7201 cttgccttca gacaccgggc gatgatgggt ggcgttaagt tccgtgccca ccacacactg
     7261 cccgtcacgg gtcatcataa atccggccat cgatcccagc gtttcagcca gcgccgccga
     7321 cgcgccgcca tgcagcaggc caaacggctg atgagtacgg gtatcaaccg gcatttcggc
     7381 ttccagcaca tcatctccca gacgggtata cacaattccc agatgcgcca ccattgtgtt
     7441 atcgctggtg gcgttcagtt cgtcgagcgt taaatggcgt ttccagatca tgcttatgcc
     7501 cccagcgttg agccgccatc gaccacaata tcctgtaggg tgatatggct ggcgaggtca
     7561 gaggcgagga acaaaatcgt gttggcgatc tcttgtggac gggcgatttt ccccagcgga
     7621 atgccgagtt taaactgctc gccaaagccg cgaatacgct gttcttcggc gtcatcgctc
     7681 acccacagcg tgcgttgcat atcggtgtcg gtggagccag gcgaaaccac attacagcgc
     7741 acgccgctac ccgccagttc cagcccgacg ctcaacgcca ggcttttcag cgccgctttc
     7801 gatgcgccat aagcactcat accaatacgc ggcgtgtgtg cggcgtcgga cgccacagtg
     7861 acaatcgccc cgccccgctg acggcgaaac tggttcatgg tttgctggaa caggttaaac
     7921 gcaccgccga cgttaaccgc aaaagtctgc tgccagtcct ctttactgag ctgatcggtc
     7981 gcgcccatgc gcaaaattcc cgccgcattg atcagcacgt ccagtcgctc cgtttcagct
     8041 aacagtcgct gacatacctg cgccacctgc ccggcgtcgg caacatccat tacttcggtc
     8101 gcaaagggat attgctcctg agtgaacgct tgatcaaaac ctgtaacttt cgctcccgcc
     8161 tcaacaaacg ccagcgccgt ggcgtagccg atacctttac ctgcgccggt tacccagaca
     8221 tttttaccgc tgaaatccat tatttaacct cgcgggagag tagcttccac caggcgtcga
     8281 tggtcgggtt tttcgccagc atgacaaagt cgatatcacc atgcactttg cgccagcgcg
     8341 ccgccagcgc catcatgcgc accgaatcca gaccgtagtc gatcaggttg tcgtcatcga
     8401 acggttcatc ggactcgtcc agcaacggca ggataacctc acgcagcgcc gctttgctgg
     8461 cggggacagg tgctggcagt aattcttcag tcatcaccac ccggccagac cgcccggcca
     8521 catatttcag cgacatcaaa tgctcgtcac ggctgaaatc ggccagcgca tccgccacca
     8581 taaacggttt aatatcgcgc ataaatgcgt cggttgcggt ggtcatacag ccaatgtggg
     8641 catatacccc ggtaataatc agctggttac gtccactctc tttgagcatt tgctccagcg
     8701 gagaacgatg aaacgcgctg tagcgccact tcaccagcac cgtgtcgtcg gcatctggcg
     8761 tcaggcgatc caccaccttt tgctgttccg gcgaacgggt caggcccggc ccccacatat
     8821 cattcaacag cgcccgatct tcatcgctct gctctttcgg ctgggcggtg taataaactg
     8881 ggatattgtg ctgtttgcag tagtcgcgca gcgcagcaat attcgcgatc acctgctcca
     8941 tcatcgggca gttctcgccc cagaagctga caaaatagtc ctgcatatca tggattaaca
     9001 acgcggcacg ttgcagttca aaggcccagt caactttatt ctgcggaata tcgtgagact
     9061 ccggcagtgc gtaagcctgt aattttggaa tagccatcgt gttctctcct tcaggctgat
     9121 gcgcgtgacg ccagccactg acttaattgt tttttatcga ctttcccgac cgccgtcagc
     9181 ggaagtgaat ctacacactc cacgcgatcc ggtaatttaa attcggcaat accctgttca
     9241 cgcaggaaac gacgcacctg caccgcgcgc agcggctctt ttaccaccag ataagcacag
     9301 cttttttcgc ccatcagctc atcttccatg ctcaccagtg cggcatagat caccgccgga
     9361 tggcgcagca gcaggttttc gatctcttcg gcagcgatct tctcgccgcc acggttgatc
     9421 tgatctttct cgcgcccctg cacggtgatg taaccctctg gatcaataga gatcagatcg
     9481 ccggaacagt aaaaaccgtt ggcatcaaag gcgctggcat tgtgctgcgg acttttgtaa
     9541 taaccgcgga aggtgtacgg cccgcgcgtc atcaggcgtc cgacttcccc ttgcggcagt
     9601 ggatttcctt cggcatcggc aacccacact tcatcgtccg gacacattgg gtaaccctgg
     9661 gtatggataa ttttctccgc gctatcatca agacgggtgt agttcaccag cccttccgcc
     9721 atgccaaaca cctgctgcaa ctggcagcca atctcagcgg gaatacgcgc cgcaagggtg
     9781 gcagaaagac gtgcgccgcc gacctgtaac agtttcagcg aggcaagctg cgcccggctt
     9841 tcgccttcag ccagcgcctg caaccacagg ctgactgccg gcggcaccag cgcggtgacg
     9901 ttcacctgat gtttttcaat caatgggaag caaagcgtag cgctgggatc ggccgccaga
     9961 acaaccgttc ctccggcaag aaagacgccc agcgatcctg gcgaactcat ggcgtagtta
    10021 tgagccgccg ggatcgcgca caggtagcgc gtctgttgtg tgaactgaca aatctcgacg
    10081 ctacgacgca cgctgtagta gtagtcgtta tgagtgcgcg ggatcagctt cggtgtaccg
    10141 gtggtgccgc cggaaagctg gaaataggcc acttcatcag caggtgatgc cgtggcagta
    10201 aaaccgtctg ccggatggtt aatcgcatcc tgcaagttat gctcaccgct gtcgttgtgc
    10261 agttgcacca cgcgaatgga ggaatgttct gtgacgaaag tattgaggaa atcatccccg
    10321 ctaaacagcg catgttggcg atcggcaatc agcaatgcgg gttcaatctg gctggcatag
    10381 gcgttcagtt cactacgctg atggctgaac aacgccagca ccggcgcaac gcccagtttc
    10441 agcagcgcga aaaaggtaat atacaattca gcgacgttac ccagttgtac cagcgcggtt
    10501 tcaccaggtt taatgccctg acggcgtaaa gtacacgcga ggttatccgc cgcctgattc
    10561 agctcccggt aactcaactg tagctcgccg tcgataaccg cgatgctgtc actcgcagcg
    10621 tggcgagtca gaatgtcggt cagcggcaaa tcctgccagt agcctttttc ccgatagcga
    10681 cgggcaaact cttccggcca gcgggtgaat ggaatgctca tcctcgctcc ttaatgcaat
    10741 ccaaaaacat tcaacatggt agaaagtttg acgcctgttt cgcgccactc acccaacggt
    10801 gacgacgcaa gcacaatccc cgctccggca aacagacgca cctgattttc ccgcagcttc
    10861 gcgcagcgga tggtcaccac ccattcgccg ttaccttcgc tgtcacacca acccacaatg
    10921 ccgccaaaca gttcgcggtc gaacggctcc agttcagcaa taacctgagt cgcggcctga
    10981 tgcgggaaac cgctcagcgc gggggtcgga tgcagcagac aggccagagt cagtgcgttt
    11041 tcttgcgaat tcgctttacc ttcaaaggga gttgcgagat gccacagcgt cggcgtggta
    11101 atcaattgtg gagaggaggg aacgtgtaac tcactactgc gttcgcgcag tacctctttc
    11161 atcgcctgag tcaccagttc atgttcatgg cgatcttttt ctgacgccag cagacgatta
    11221 cccgcttcgc gatcgagcac ttcatccggc tgacgacgcg cggaaccggc taacggaatg
    11281 gagctaaaac gctcgccgtc tttacgtagc agcagttccg ggctggcccc cagcaggacg
    11341 ccaccatcag ccagcgggac atggaagttg taactaaccg ggttttgcgc aatcaaccgt
    11401 tccagcaata cgccactatc aatggcggcg tcagtggtga tatcaatcaa ccgtgacaac
    11461 accactttgt cgacctgcgg cgtggcggta agtgcggcag cgcgggcaac catctgttca
    11521 aacgtggttt gttccggaat tgcctggcgt tccaccacat tcagcgactg gctgcgggtg
    11581 aaacggcggg cggaagcttg tttttcctga cgggagaacg actgccagga ttcaggaata
    11641 tacagcgacg aaggctgacg tggatcgaag ggaatcgccc cgaccatcac cggatttttg
    11701 atgccctgca ctttggcatc ggcaaacagc gcggcgagtt tttgctggaa gggactgtcg
    11761 ggcgaatccc cgttcacagc cggttcatcg aagcgggcga aacatcctga cgtcgtaaaa
    11821 ctgcggtacg gcgacataaa gaaaaagcga ttgggcgcaa gtgttgccat ggtctgctgt
    11881 acttcctcag ccagtgacgt atccatatca tcctccacaa aatgataaag gctttaataa
    11941 tgattatcat ttatattttc ggtcgctaac ctaaaagcaa acgcgcacta tgtcaactct
    12001 tgaggtaacg caatctgcaa ctcggggttg catctggttg tggttacaat gaaaatgaga
    12061 agcattattg atggattcgc ataagcgcaa tgtgatgtcc tgcgccgttc ttccccctct
    12121 cccttccagg gagagggctg gggtgagggt caatattcgc accagtgctg gctgctccca
    12181 tcaccctaac cctctcccca aaggggcgag ggtacggata gtgcgctttg tcgaatttgt
    12241 cattacgccc ttaaccttat taataacagg aagctgattt gtgagactcg ccccgctcta
    12301 ccgcaacgcc cttctattaa caggactttt gctttccgga atagccgcag ttcaggccgc
    12361 cgactggccg cgtcagatta ctgacagccg gggcactcat accctggaaa gccagccgca
    12421 gcgtattgtt tccaccagcg tcaccctgac cggctcactg ctggcgattg atgctccggt
    12481 gattgccagc ggcgcgacca cgccaaataa ccgcgtcgcg gatgaccagg gctttttacg
    12541 ccagtggagc aaggtggcga aagaacgcaa actacaacgg ctctatatcg gcgaaccgag
    12601 cgccgaagcc gttgccgcgc aaatgccgga tctgatttta attagcgcaa ccggcgggga
    12661 ttcggcgctg gcgctgtatg atcagctttc caccatcgcc ccgacattaa tcatcaatta
    12721 cgacgacaaa agctggcagt cgctgttaac gcagcttggc gaaattaccg ggcatgagaa
    12781 acaagcggca gagcggattg cacagtttga taagcaactg gcagcggcga aagagcaaat
    12841 caaattaccg ccgcagccgg tcactgctat tgtctatacc gccgctgcac acagtgccaa
    12901 tctctggacg ccggaatcag cacaagggca gatgctggaa caactcggct ttacgctggc
    12961 gaaattgccc acagggttaa acgccagcca aagccagggc aaacgccatg acatcattca
    13021 gcttagtgga gaaaatctgg ctgcagggtt aaatggcgag tcactattcc tgttcgccgg
    13081 tgatcagaaa gacgccgatg cgatttatgc caatccactg ctcgcgcacc tgcccgcagt
    13141 acaaaacaag caggtttatg cgctgggaac cgagacgttc cgcctggatt actacagcgc
    13201 catgcaagtg ctggaacgac ttaaggcgct gttttaagca ttaactgtcg gacgctgtca
    13261 cctgcggcgg cgtctggcga aaacgtcgca actccaccag caccagcaat aacaacacgc
    13321 cgataatcaa caaaccaaaa ccgctcgcgc ttgcggaagc aaccggtgtc atcatcgctc
    13381 ccagaccgcc taacagcgcc gcgcctatgg catcgcccgt cacgttttgt gccgtccaca
    13441 aaccgttgat tcgccctaac attgcttccg gcgtttgcgt ttgcagcatt gtatattgca
    13501 gcaacgaact gaccgcactc agccagccga acagcgccag acaaaccacg cctaaaatcc
    13561 acatcggcat caggccaaat aaaccaatgg cgaggaacga tcccaacgtg gagagcaaca
    13621 tcaacaatcc tggtcgcgcg ctatgcgcca gtttcccact ggttaatgcg ccaatagccg
    13681 caccgagcgg gatcgccgca tagagaaaac caatctctgc cgccgacatc tgccagttgt
    13741 cagccagcgc cggatacagt acccgcaccg cgctcgccat cgtcaataaa ccacccagca
    13801 acgcaatccc gcccaccagc gggctggcga gcagaaaacg aaatcctgcc agtaatgatt
    13861 tcaacggatg ctcgcgcggc tgcggtggcg gtggcaacgc cggaaggctt aacaacggta
    13921 gcaaggtaat aaacgtgccc gccgccgcca gcccgtagtt ccaggctacg ccaccggtcg
    13981 ccagcaataa accgccaatc atgggcgaaa tcaccgaccc cagacgcacg gtcaacatgg
    14041 tgatcgcccc ggcctgcatt aagttttcac gccctaccag tgctggtgtc gccgccaata
    14101 gcgccgtaac gccaagcgat gcgaaaaaac catcccataa accaagtaaa tagattgcca
    14161 gcaatgacgg ctccggcagc agtgcattaa ggcacagtcc aatgaagcca atgccacagg
    14221 tgccgcgcgc cagcaaaatc acttttttgc gctcatagcg atccgccagc acaccgccaa
    14281 ccatcaggcc aacaaacatc gcgccgccgg tcagcgtcac cgaaagcccc accagccagg
    14341 tagaatgcgt catcatctgg atctgcaccg gcaccgcgac gccgagcaaa cccagagaca
    14401 caattgagat aaaacgagcg aggaatactg cgcgaaacgc cgggtgcgtt ttcaacaggc
    14461 tgaggttaag cagccaggat tgtttattca ttacaatgcc ttgccatcaa atattttaaa
    14521 tacctattct taggctgcac atgctaacat atccaaataa gatcgataac gataattaat
    14581 ttcattatca tggaagttcg tatgtctggt tctgttgccg tgacacgcgc cattgccgtg
    14641 cccggattgc tgttattact gattatcgcg acggcattaa gcctgctcat tggggcaaaa
    14701 tcactccccg cttccgtagt gctggaggcc ttctccggca cctgccagag cgccgactgc
    14761 accatcgtgc tcgacgcgcg actgccgcgc acccttgccg gtttactggc aggcggcgcg
    14821 cttggccttg ccggggcatt gatgcaaacc ctcacccgaa atccacttgc cgaccccggc
    14881 ttgcttggcg tgaacgccgg agccagcttt gccattgtgc tgggtgcggc gctgtttggt
    14941 tactcatccg cgcaggaaca actggcgatg gccttcgccg gggcgctggt ggcctcattg
    15001 attgttgcct ttaccggcag tcagggcggc gggcagttaa gtccggtgcg tttaaccctg
    15061 gcgggcgtgg cgctggcggc agtgctggaa gggctgacca gcggcatcgc cctgcttaat
    15121 cctgacgtct acgatcaact gcgtttctgg caagccggtt cgctggatat tcgcaatcta
    15181 cataccttaa aagtggtgct gatcccggtg ctaatcgccg gagcaaccgc gctattactg
    15241 agccgcgcgc tgaacagttt aagcctcggc agcgacaccg cgacggcgct gggcagtcgc
    15301 gtggcgcgca cacagttaat tggtctgctg gcgattaccg tgctttgtgg tagtgcgaca
    15361 gcggtagttg gcccgattgc ctttattggc ctgatgatgc cgcatatggc gcgttggctg
    15421 gtgggtgccg atcatcgctg gtcgctgccc gtaacgctgc ttgctacccc tgccctgctg
    15481 ctgtttgccg atatcatcgg gcgggtgatt gtgcccggtg aactgcgcgt ttctgtggtc
    15541 agtgccttta ttggtgcacc ggtgctgatc ttcctcgtgc gacgtaaaac gcgaggtggt
    15601 gcatgattta cgtctctcgc cgattactca tcacctgttt gctgcttatt tccgcctgtg
    15661 tggttgcagg tatctgggga ttacgcagcg gtgccgtcac gctggaaacc tcgcaggtat
    15721 tcgccgcgct gatgggcgat gcgccgcgca gtatgacgat ggtggtcacc gaatggcgtt
    15781 taccacgcgt gctgatggcg ctgttgattg gcgcggcact gggcgtcagc ggtgcgattt
    15841 ttcagtcgct gatgcgtaac ccgctcggca gccctgacgt aatgggcttt aacaccgggg
    15901 cgtggagcgg cgtgctggtg gcgatggtgc tgtttggtca ggacctgacg gctatcgcgc
    15961 tggcagcaat ggtgggcggc attgtcactt ctctgttggt ctggctgctc gcctggcgta
    16021 acggtatcga cacctttcgg ttgattatta tcggcatcgg cgttcgcgcc atgctggtgg
    16081 cctttaatac ttggctgttg ctgaaagcgt ctttagaaac ggcgctaaca gcgggtttgt
    16141 ggaatgccgg atcgctcaat ggcctgacgt gggcaaaaac ttcgccttcc gcacccatca
    16201 ttatattgat gctcattgcc gccgccttgc tggtgcggcg aatgcgcttg ctggagatgg
    16261 gcgatgatac cgcctgcgcg ctgggcgtca gcgtcgagcg ttcgcgtctg ttaatgatgc
    16321 tggttgcagt ggtgcttacc gctgcggcaa cggcgcttgc cgggccgatt tcctttattg
    16381 ctttagtcgc gccgcacatt gcccgacgca ttagcggcac cgctcgctgg gggctgaccc
    16441 aggcggcgct gtgcggagcg ctgttactgc tggcggccga tctctgcgcc caacaactgt
    16501 ttatgccgta tcaacttccg gttggcgtcg ttaccgtcag cctcggcggt atttacctta
    16561 tcgtcttgtt aattcaggag tctcgcaaaa aatgaccgaa tcagtagccc gtttgcgcgg
    16621 cgaacagtta accctgggat atggcaaata taccgttgcg gaaaatctga ctgtagaaat
    16681 tcctgatggt cacttcacgg caattatcgg accaaatggc tgtggtaaat ccacgttact
    16741 gcgtacctta agccgcctga tgacgcctgc tcacgggcat gtctggctgg atggcgagca
    16801 cattaaacat tacgccagta aagaagttgc acgccggatt ggtctgttgg cgcaaaatgc
    16861 taccacgccg ggcgatatca ccgtgcagga gctggtggcg cgtggacgtt atccgcatca
    16921 accgctgttt acccactggc gcaaagagga tgaagaagcg gtaacgaaag cgatgcaggc
    16981 cacgggaata actcatctgg cagatcaaag cgtggatacc ctttctggcg gacaacgcca
    17041 gcgagcgtgg atcgcgatgg tgctggccca ggaaacggca attatgctgc tcgacgaacc
    17101 cacgacctgg ctggatatca gtcatcagat tgatctactg gaactgttaa gcgaactgaa
    17161 ccgcgagaaa ggctataccc tggcggcggt gctgcacgat cttaatcagg cctgtcgtta
    17221 cgccagccat ttgattgcat tgcgggaagg gaaaattgtt gctcagggag cgccgaagga
    17281 gattgtcact gctgaactga ttgagcgcat ttatggtctg cgatgcatga tcattgacga
    17341 tccggtagcc ggaacgccgc ttgtggtgcc gctcgaacga acggcacctt caaccgcaaa
    17401 tagttaaact aagtggtctg ccatcatggc atcctgtttt ctggatgcca tcgcatagcg
    17461 caataacacg ctaccacaag ccaccatccc gccgatcagc gcggaaagga tcacaataat
    17521 cgccttaccc ggaccgtctt ttttcactgg caatgacggg cttaactgat atttaaacgg
    17581 cgtaaaattc acatcgttga catttgcttt tgttaattgc tcgacaagat actgccgatt
    17641 acgtaattca ccgttcagtt ccgcaacgtc agtaaccgct ttttcaattt ccagtttgcg
    17701 ttcaataccg tctgcgccga gagaaataga gaaatcgggg tcatctttaa cggcctgacc
    17761 attactgtat acgggctttt taattcctgc cgcgttggca atgtcgagtg aataattgag
    17821 gcgctgaatg tttgcatcaa gttgattttt cgttttaatg cgatcctgag ccagtttttc
    17881 tttttcaaac tgggttttga tctccagttt attacggacg ttttctatcg actctttcac
    17941 caccaacgca gagatataat cgatataccc gctcaaaacg gtctgcgcct ctttactggt
    18001 tggcgcggta aaacttagcg tccaggaggt atacagtgac ggttcatctt ttttcttact
    18061 ggcattgtca tcaaccgctt tcattttttc gctcaatgca acaatagcgc gatgcaaatc
    18121 cagttcatcg attttcgcct cttttaattg gtccatcaca taaggtgatg aacgcaggta
    18181 ctcttccagc aagctaacag actgaaactt cttgataaac aggttaaatg caccgccacg
    18241 gtcgatatta acatcgagat caagaacgcg gagtttggta aaggttttct ccaggtcctg
    18301 ccactgaatg gcttcggcgg gagtaataac ggctgagctg gtccattttt gcggcaggat
    18361 gaaagagatc agtaaacctg cgcaggcaaa tgcaaaaacg accgccatga ccgttttttt
    18421 ggcccgccat aaaacttcga ttagattaag taaatcaatt tcattactac tgggcgacgc
    18481 cagaggatac tcggaaaaat gagcgtcact tccctgttta atattcagtg atgacatggg
    18541 tataacctga aaatgagtcc aataggggga aatctccacg gcgctcactt taccagttgg
    18601 tgagaattat ccgaagctga agtttgtaaa ttccttccac tgaatgcaac attcactcta
    18661 tttaagagaa atattcatca aacctataaa tcaaacaaat aaaaaaccca taattatttt
    18721 ctgtaattat gggtttatag ataatattaa tttacctgtt tagcgttgcg cgaataatcg
    18781 gcccaatttt tacaaacgcc cctggagaga taatatccac atgcgcacaa tcctgacgat
    18841 agatatccag ctcggcaatc cagggcgacc aagcgcgttc ggggctcata ccttcctgaa
    18901 gcgtgcgttc agcaacaaac agcgtcgctt taccatcaaa cggtacgcta tgagcagtcg
    18961 tcagcagacg cacagcatca gcgtagttgc cttcaatggt ggtaaacaac tccgttgaag
    19021 tacttccctg ctgtgccgcc aggaaggcct cgcgttcgcg gttaatctcc gccagcactt
    19081 ccgggtccag accattagcc tctttttcct gccagttttg cgtttctggc ggccaggtat
    19141 ccagcaaacc aagaaatgcc acctgttcgc cacgggcacg cagtcgcgcc gcaatgccct
    19201 gcgccagcgt accgccaagg gaatacccca gcaggtaata agggccgtgc ggttgttgtt
    19261 caagtaacgt tgccagatgc gcttcacaga cttcatccag atttgccgcg gtatgcatgg
    19321 ggccattggg gcgcggcgac tgaatgccga taatcgacca ttgtggatcg atataacgcg
    19381 agagcacgct aaactgccag gcaaaaccgg atgccggatg gaaacaaaac agcgtcgggc
    19441 cattaccttc acgcaacggc agaatggttt cgaatcccat acgccgggtg ctgtcttctt
    19501 cagcatcaat aatcgttgcc agtttagcga cggttgacgc gaccatcact tgccccggcg
    19561 tcacctggcg ggcaacctgc cgacttaact gcgctgccag tttcattgcc agtagcgaat
    19621 gaccaccaag cgcaaagaaa tcagcatcgg catcctgcac gtcacaaccc agcaacgacg
    19681 cgaatgccgc ggcaataatc gtttcactgc ccgcttttgg cgcacgcccc ggcgcttgtg
    19741 ccttcagttc aggcaacggt aaggctttgc gatccagctt gccgttggcg ctaagaggta
    19801 acagtggaag ttgcagcaga accacgggca ccatatgtgg tggcaatgtt tcgcgaagct
    19861 gcgcctgtaa tgcgctggta tccaacggca gacctgattg cgacaccaga tagcccacca
    19921 actgacgcgc atcaccaccg gtggctgccg cctggttaat cacacaggcg tgggtaacgg
    19981 cttgttcgac atccggcagc gcctgcatca cgcgatcgat ttcgcccagt tcaatacgct
    20041 gcccgcgaat ttttagctga tcgtcactgc gcccgaggta ctccaccgcg ccgttatcca
    20101 gccagcgggc aacgtctccg gtacggtaca tccgttcacc agggacaaaa ggatcggcaa
    20161 taaagcggct ggcggtcaga tcgggtcgtc caagataccc ctgcgccagt tgaatgccgg
    20221 tgagatagag atcacccgcc acacccggcg gcaccggatg catcatcgca tcaagaatac
    20281 gcagacccgt attccatacc ggataaccaa tcggcacact gctgccgcgc acctgtgcca
    20341 gttcctcgcc aaaagccgga taccagctga catctaccgc cgcttccgtc gggccatata
    20401 gattatgcaa cggcacgctg gttaactgtt gccattcgcg gcataaatca gccggtaagg
    20461 cctcaccact acagaaaacc tgtttcaacg tcgcgcaact ctggcgagcg gtttgcggcg
    20521 tcagcgatgc aacaaatgct gccagcatcg acggcacaaa gtgcgtggtc gttacgccat
    20581 attcggcaaa gaattgctgc atagcgagcg ggtcgcggtg cgcttccggt tcagccatca
    20641 ccagtttagc cccggcaata aacggccaga aaaactccca caccgagaca tcaaaactgc
    20701 acggcgtttt ttgggcaacg acatcttcgc ctgtaagcag ataatgattt tgcatccaca
    20761 acaggcggtt aacgatagcc gtctgcccga ccattacccc tttcggcctg ccggtggagc
    20821 cagaggtaaa gatgatataa gccgtgtgat gcggttgtga aagttgcagc ggcgcactgc
    20881 cctgcggttt aagcggggcg ttatagcaaa ggttggttaa atctggaaca tcggcaaagc
    20941 gcggcagttg atcgtcggtg gtgattaaca gcgacggacg cgcatcttcc agcatcattt
    21001 tcaggcgatc gtccggatag ccggtatcca gcggtagcca ggccgcgcca gcttcaacta
    21061 tcgcatgtag cgccagggtc aaaaagaccg agcgcggtag cgccaccgcc acgctgtcgc
    21121 ccggtttaac gccacgctca cgcagcagat tcgccagcgc caccacctgc tcgcgcattt
    21181 cccgatagct gaactggtaa cgcgcatctg ccagcgccgg agcatccggt gtttttgccg
    21241 cttgttctgc caccagcgcg ctcagcgtgg tttctggaat ctcaacctga gtggcgttga
    21301 tctgcgccag ctgcgcatac tcacctggca gcataatatc gacatcgccg cacaacagcg
    21361 ccggatccgc ggcgaactgg gcaatcagca ttttcaggcg ttcagcatgc tggattaacg
    21421 ttggctcatc gtaacgctgt ttattggcga ggatctcaat actcaaatca ccgtgttcat
    21481 ccgggaacag ggccagttca aggtcattaa ccggaccggt tgccaaggta tgggtttgcg
    21541 cctgaacacc aggaatatcc agttggtaat caaatacctt gatattgagt accggaccaa
    21601 acagcggttc atcacctgcc gctcgcccgc tgtcacggac aatttgttcg gcatcgtaac
    21661 gttgatgacg acgcattttt ttcagttgtg ctgccagtcg ggttgccagt tccggcagcg
    21721 tttcttgcgc cgcaatgtga atacccaacg gcaaaacgtt gagcacgggt ccggtagccg
    21781 tcagcgccgc cgagcccagt cgacgcataa agataaatcc agcggcgtag tccatgcgat
    21841 tgcacaatcg ccccagccac aaagccgtca gcgcaagggc taaatcggta cgctgcacac
    21901 ctgaaagttg cgtagccaac tggcggaatt ccccgtcggt aaattccatt ttcagacgta
    21961 aaatatctgc cgaagcgctg cgccccggta aaggtgccgg agaaagtgac gcgggcggcg
    22021 gcagttgacg acgctgttct gcccagaatg ccgcatcacg ctgccaggct tcgctttcgc
    22081 ggtattgctg gtactcttcc actacatcag cgaaaggcgt aaacggcgaa gcaggcgttg
    22141 gttcaccacg cagccatgtg cagtaaatat tggcgatctg gcgggtaatg gccgggaaac
    22201 tgaagccatc gaccagcaaa tggtgataac gctgatacca gtaccagcgg ttatccgcca
    22261 cctgtatcag ctgatgaaag accagtggtt taccgctatc gacgcgcaga tcttgttgca
    22321 aatccgcctg cattaatgcc tgcgcagtac cgtgcggatc aatgttggtt cgcaggtcga
    22381 taatttctgg cagttcgaac gtcagcgcat catcgaccca ctgccagact tcgccgttat
    22441 cttccgtaaa acgcatccgc agcgtatctg cttgcgctag tccgtcaacc accgcgcggg
    22501 ccagtaatgg cgcatcaacc tctccggtta actcaacgta atgcgctacg ctccaggcgg
    22561 agggtaaatc cgacagtttt tctgccatcc agatgccggg ctgtgcggcg accaaaggta
    22621 aatgctggct cattgcgcct cctgcaactg ggtgaaattc gccggtgtca gagtacgcca
    22681 gtgggcttca agccactgct ggcaggactc ttgtgactgc ggctgacaca caatgtccca
    22741 gcctgccggt aaggcgcatt gttgcggcca cagactgaat tgcccctgcg cattgcgcaa
    22801 aatgtaaaac gctccctgtg gatcatcgaa gggattactg aatgccatat tcaactcctg
    22861 tcatggaaaa gtggttgcca gaggtcgatt agcccctgca tcaagccacc gcgccaacaa
    22921 agcgcatcat gtccgccgtc aacctgacgc cagaaaatgg attcttttat ggggtgtaat
    22981 tgcgcataca gcgcctgatt ggcccgcata atcatcggct cgcgaatacc cgcttccagc
    23041 acaatgcgca gaccttcggc gctaacttca ccagctttaa gcttttcaag taacacgccc
    23101 tcttgctgcc cgccccgatg cggccaccag tacgatcctg actggcttaa tacacaacca
    23161 aaacgttcag gccagtgcag tccggcatac agcgcggaaa gtccaccaaa actctgcccg
    23221 gcaaccacgg tgcgatcggc gcgatcgcta aaaggggcaa tagctttcac caggggtaat
    23281 aactcttgct gtactgcgag ccagaaatcc gcattacacg gcagttcgtg agcgcggtgc
    23341 gtggtgtcga tagcgtcgat caacacatac acggcgggag gaagttgctg acgatgggtc
    23401 agcgaagtca gcactggcca gacgggcata ctttgcgccc aaaattcgcc atcgagcaaa
    23461 actgccagcg ggcgttcttc tgctgttgca tcgccggtgg taaaaatcca tacacgacgt
    23521 gaatttttca accgttcact tttccagata atttctttgg ctggtatttc tggcgcttgc
    23581 ggacaatccc atcccggttg cagaggcgct tgcggcattt cgagtgcaga aacagcgtgc
    23641 cctcgcccgc ctttccagct ttgtggattc agcggatcgg ctattgcctg gggtaatagt
    23701 tttcgccagc cttcacgtaa ttcgaggcga tcgggggatg gtgcagaaaa aatgtcatcg
    23761 cgttcggtgg gaataaagca gtagctgccg cgccagttgg cattgagttg tgtcgtccac
    23821 tgccagacat cagtacctgc aatgcgctgc atcgactggg gctggctgtt ctgatgatga
    23881 tcggtcacac cagtgatgta gacccatacg cgctttatcg gcgagtattc ttcagaacct
    23941 tggggatcac gccaccagaa agtgacctca aacatttcgt cattcagacg ctgccattcc
    24001 gggccatgtt tcgactgcca ccagctctca cttcctactt ttaacgccgt cacaccataa
    24061 ccccatgttt actgtgcaat ttttcattga ttgcagaaat atattgataa tattattgat
    24121 aactatttgc atttgcaata gcgtaatggc gcgccgtggg aagcgcggac attaattaac
    24181 caactgcact gcgtgtcttt caggatcaaa ggttttcgcg gtagcgggat gcgtcgtgtt
    24241 gaggacgacc atgcccgaca gttgcaattc gtggcaaaaa tgcaggaata aaacaatgaa
    24301 caagaagatt cattccctgg ccttgttggt caatctgggg atttatgggg tagcgcaggc
    24361 acaagagccg accgatactc ctgtttcaca tgacgatacc attgtcgtta ccgccgccga
    24421 gcagaacttg caggcacctg gcgtttcgac catcaccgca gatgaaatcc gcaaaaaccc
    24481 ggttgcccgc gatgtgtcgg agatcatccg taccatgcca ggcgttaacc tgaccggtaa
    24541 ctccaccagt ggtcagcgtg ggaataaccg acagattgat attcgcggta tgggtccgga
    24601 aaacacgctg attttaattg acggcaaacc ggtcagcagc cgtaactcgg tgcgtcaggg
    24661 ctggcgtggc gagcgcgata cccgtggtga tacttcctgg gtgccgcctg aaatgattga
    24721 acgtattgaa gttctgcgtg gtccggctgc agcgcgttat ggcaacggcg cggcgggtgg
    24781 cgtagttaac atcattacca aaaaaggcag cggtgagtgg cacggttcct gggacgctta
    24841 tttcaatgcg ccagaacata aagaggaagg tgccactaaa cgcaccaact tcagtctgac
    24901 cggcccgctg ggcgacgaat tcagcttccg cttgtatggc aacctcgaca aaacccaggc
    24961 tgacgcgtgg gatatcaacc agggccatca gtccgcgcgt gccggaacgt atgccacgac
    25021 gttaccagcc gggcgcgaag gggtgatcaa caaagatatt aatggcgtgg tgcgctggga
    25081 cttcgcgcct ctgcaatcac tcgaactgga agcgggttac agccgccagg gtaacctgta
    25141 tgcgggcgat acccagaaca ccaactctga cgcttacact cgctcgaaat atggcgatga
    25201 aaccaaccgc ctgtatcgcc agaactactc gctgacctgg aacggtggct gggataacgg
    25261 agtgaccacc agcaactggg tgcagtatga acacacccgt aactcgcgta ttccggaagg
    25321 tctggcgggc ggtaccgaag ggaaatttaa cgaaaaagcg acacaggatt tcgtcgatat
    25381 cgatcttgat gacgtgatgc tgcacagcga agttaacctg ccgattgatt tcctcgttaa
    25441 ccaaacgctg acgctgggta cggagtggaa tcagcaacgg atgaaggact tgagttccaa
    25501 tacccaggcg ctgaccgggg cgaacaccgg cggcgctatt gatggtgtga gtgccaccga
    25561 ccgtagcccg tattcaaaag cagaaatttt ctcgctattt gccgaaaaca acatggagct
    25621 gactgacagc accatcgtaa cgccggggct gcgtttcgat catcacagta ttgtcggcaa
    25681 taactggagc ccggcgctga acatatcgca aggtttaggc gatgacttca cgctgaaaat
    25741 gggcattgcc cgcgcctata aagcgccgag cctgtaccag actaacccga actacattct
    25801 ctacagtaaa ggtcagggct gctatgccag cgcgggcggc tgctatctgc aaggtaacga
    25861 tgacctgaaa gcagaaacca gcatcaacaa agagattggt ctggagttca aacgcgacgg
    25921 ctggctggcg ggcgtcacct ggttccgtaa cgattatcgc aataagattg aagcgggcta
    25981 tgtggctgta gggcaaaacg cagtcggcac cgatctctat cagtgggata acgtgccgaa
    26041 agcagtggtt gaaggtctgg aaggatcgtt aaacgtacca gttagcgaaa cggtgatgtg
    26101 gaccaataac atcacttata tgctgaagag tgaaaacaaa accacgggcg accgtttgtc
    26161 gatcatcccg gagtacacgt tgaactcaac gctgagctgg caggcgcggg aagatttgtc
    26221 gatgcaaacg accttcacct ggtacggtaa gcagcagccg aaaaaataca actacaaagg
    26281 tcagccagcg gttggcccgg aaaccaaaga aatcagtcct tacagcattg tgggtctgag
    26341 cgcgacctgg gatgtgacga agaatgtcag tctgaccggc ggcgtggaca acctgttcga
    26401 caaacgtttg tggcgtgcgg gtaatgccca gaccacgggc gatctggcag gggccaacta
    26461 tatcgcgggt gccggggcgt atacctataa cgagccggga cgtacgtggt acatgagcgt
    26521 aaacactcac ttctgatgct aacgtcagat tgttgataaa gtgcgcgtcg ttcatgccgg
    26581 atgtggcgtg aacgccttat ccggcctaca aaaatcttgc caattcaata tattgcagga
    26641 ccatgtaggc ctgataagcg tagcgcatca ggcagtttag cgtttgtcac cagtctctaa
    26701 tatggtcgac atgaaaacta cgcatacctc cctccccttt gccggacata cgctgcattt
    26761 tgttgagttc gatccggcga atttttgtga gcaggattta ctctggctgc cgcattacgc
    26821 gcaactacaa cacgctggac ggaagcgcaa agccgaacat ttagccgggc ggatcgctgc
    26881 aatttatgcg ctgcgggaat atggctataa atgtgtgccc gcaatcggcg agctacgcca
    26941 accggtgtgg cctgcggagg tatacggcag tattagccac tgcggggcta cggcattggc
    27001 cgtggtttcc cgtcaaccga ttggcgttga tatcgaagaa attttttctg cgcaaacagc
    27061 gaccgaattg acagacaaca ttattacacc agcagaacac gagcgactcg cagactgcgg
    27121 tttagccttt tctctggcgc tgacactggc attttccgcc aaagagagcg catttaaggc
    27181 aagtgagatc caaactgatg caggttttct ggactatcag ataattagct ggaataaaca
    27241 gcaggtcatc attcatcgtg agaatgagat gtttgctgtg cactggcaga taaaagaaaa
    27301 aatagtcata actctgtgcc aacacgatta attgacaaca tctggtacga ttcgcccgca
    27361 gccatcactg accgcgggcg aaagtgtaaa gcaggtgcct taccatcctg acctgacaac
    27421 cggatatgcg gggattgctc cccgcacaac ggctacttct tcggttcgta agcgagaaca
    27481 gccttaaact caatattacg ttcctttacg gtgaactcac acagcgaatc cccgaccaga
    27541 agcgtaaatc ccagcaccgt taaacacagc actatgactg ccgcaagggc atatttcgtc
    27601 agcatgttta tattgcctcc atgcgaagaa gggactacca tccaaattgt tcaggtttgg
    27661 gtaggtagcc ccagggttga tagaaatatc gtcctggggc ttcatctttc cagacctcag
    27721 agtaaacctg aaaccggaaa gcttcaggca cccgcagtta tcttaccctt gcttagcaaa
    27781 atagctgttt atttatacag taagtcctgt ttcggacttc tcactcccca tttgatcaac
    27841 tgaagctgaa cccgtttttt tctgcatgcc tcaatcgtca aaattcttcg ccaccagtca
    27901 gcactgccat aacttgtcac attgcaaaag tagccaaatt gcttctgtca taatcagttc
    27961 accatcacca aaaaaaagaa acattccaga acttccgcat ctcgcccagc cgctcccact
    28021 tctatactga atagaaaacg ccaacataag agaaacctat gccattaccc gattttcatg
    28081 tttctgaacc ttttacactc ggtattgaac tggaaatgca ggtggttaat ccgccgggct
    28141 atgacttaag ccaggactct tcaatactga ttgacgcggt taaaaataag atcacggccg
    28201 gagaggtaaa gcacgatatc accgaaagta tgctggagct ggcgacggat gtttgccgtg
    28261 atatcaacca ggctgccggg caattttcag cgatgcagaa agtcgtattg caggcagccg
    28321 cagaccatca tctggaaatt tgcggcggtg gcacacaccc gtttcagaaa tggcagcgac
    28381 aggaggtatg cgataacgag cgctatcaac gaacgctgga aaactttggt tatctcattc
    28441 aacaggtgac cgtttttggt cagcatgttc atgttggctg cgccagtggc gatgacgcca
    28501 tttatttgct gcacggcctg tcacggtttg tgccgcactt catcgccctt tccgccgcgt
    28561 cgccatatat gcaaggaacg gatacgcgtt ttgcctcctc acgaccgaat attttttccg
    28621 cctttcctga taatggcccg atgccgtggg tcagtaactg gcaacaattt gaagccctgt
    28681 ttcgctgtct gagttacacc acgatgatcg acagcattaa agatctgcac tgggatattc
    28741 gccccagtcc tcattttggc acggtggagg ttcgggtgat ggataccccg ttaaccctta
    28801 gccacgcggt aaatatggcg ggattaattc aggctaccgc ccactggtta ctgacagaac
    28861 gcccgttcaa acatcaggag aaagattacc tgctgtataa attcaaccgt ttccaggcct
    28921 gtcgctatgg gctggaaggc gtcattaccg atccgcacac tggcgatcgt cgaccgctaa
    28981 cggaagacac cttgcgattg ctggaaaaaa tcgccccttc cgcacataaa attggtgcat
    29041 cgagcgcgat tgaggccctg catcgccagg tcgtcagcgg tctgaatgaa gcgcagctga
    29101 tgcgcgattt cgtcgccgat ggtggctcgc tgattgggct ggtgaaaaag cattgtgaga
    29161 tctgggccgg tgactaagta gggaattgcc ttacagaaga atatccctga caatggtgtt
    29221 ttaacttaca tttaacaatg ttatgaaaca ccctttagaa accttgacta ccgcagcagg
    29281 cattttgctg atggctttcc tctcttgcct gctgctgccc acccccgcac tggggctgac
    29341 gctggcacaa aaactggtga ccatgttcca tctgatggat cttagccagc tttacacttt
    29401 attgttttgt ctgtggtttt tagtgctggg cgctattgag tattttgttc tgcgctttat
    29461 ctggcgacgc tggttctcgc tggcggatta aacgtcgatt atcgccgtac ttcgcggcat
    29521 actttgctta ttctccttcg cctaaaggaa cgtttatgga taagcaatca ctgcacgaaa
    29581 cggcgaaacg cctggccctt gagttaccct ttgtcgagct ttgctggcct tttggcccgg
    29641 agttcgatgt ttttaaaatt ggcggcaaaa tttttatgct gtcgtcggag ctgcgcggcg
    29701 tcccctttat caatctgaag tccgatccac aaaaatccct gttaaatcag cagatatacc
    29761 cgagcattaa gccagggtat cacatgaata aaaagcactg gatttcggtg tatcccggcg
    29821 aggaaatctc cgaagcgtta cttcgcgatc tgatcaacga ttcgtggaat ctggtggttg
    29881 atggtctggc taaacgcgat caaaaaagag tgcgtccagg ctaaagcgga aatctatagc
    29941 gcatttttct cgcttaccat ttctcgttga accttgtaat ctgctggcac gcaaaattac
    30001 tttcacatgg agtctttatg gatatcattt ctgtcacctt aaagcgtcat tccactaagg
    30061 catttgatgc cagtaaaaaa cttaccccgg aacaggccga gcagatcaaa actctcctgc
    30121 aatacagccc atccagcacc aactcccagc cgtggcattt tattgttgcc agcacggaag
    30181 aaggtaaagc gcgtgttgcc aaatccgctg ccggtaatta tgtgttcaac gaacgtaaaa
    30241 tacttgatgc ctcgcacgtc gtggtgttct gtgcaaaaac cgcgatggac gatgcctggc
    30301 tgaagctggt tgttgaccag gaagatgctg atggccgctt tgccacgccg gaagcgaaag
    30361 ccgcgaacga taaaggtcgc aagttcttcg ctgatatgca ccgtaaagat ctgcatgatg
    30421 atgcagagtg gatggcaaaa caggtttatc tcaacgtcgg taacttcctg ctcggcgtgg
    30481 cggctctggg tctggacgcg gtacccatcg aaggttttga cgccgccatc ctcgatgcag
    30541 aatttggtct gaaagagaaa ggctacacca gtctggtggt tgttccggta ggtcatcaca
    30601 gcgttgaaga ttttaacgct acgctgccga aatctcgtct gccgcaaaac atcaccttaa
    30661 ccgaagtgta attctctctt gccgggcatc tgcccggcta tttcccctca gattctcctg
    30721 atttgcataa ccctgtttca gccgtcatca taggctgctg ttgtataaag gagacgttat
    30781 gcaggattta atatcccagg ttggggattt agcgggtatt gagatcgatc acaccacctc
    30841 gatggtgatg attttcggta ttatttttct gaccgccgtc gtggtgcata ttattttgca
    30901 ttgggtggta ctgcggacct tcgaaaaacg tgccatcgcc agttcacggc tttggttgca
    30961 aatcattacc cagaataaac tcttccaccg tttagctttt accctgcagg ggattatcgt
    31021 caatattcag gcggtattct ggctgcaaaa aggcaccgaa gcggcagata ttctgactac
    31081 ctgcgcgcag ttgtggatca tgatgtatgc gctgctttca gtcttctcgt tgctggatgt
    31141 tattttgaat ctggcgcaga aattcccggc ggcatctcag ttaccgctga aagggatatt
    31201 tcaggggatt aaactgatcg gcgcaatcct ggtcggcatt ttgatgatct cgctgctgat
    31261 tggtcagtcg ccagcgattc tgatcagcgg tcttggtgca atggctgccg tgctgatgtt
    31321 ggtatttaaa gatccgattc ttggtctggt ggcaggtatt cagctttccg cgaacgatat
    31381 gctgaaactg ggcgactggc tggagatgcc gaaatacggc gcggatggcg cggtgatcga
    31441 tattgggtta accaccgtca aagtgcgtaa ctgggacaat accattacca ctattcccac
    31501 ctggtctctg gtttctgact cctttaaaaa ctggagcggg atgtcagcat ctggcgggcg
    31561 acgtattaag cgcagtatca gtattgatgt caccagtatt cgttttcttg atgaagacga
    31621 aatgcaacgt ctgaataaag cgcacttgtt aaaaccttat ttaaccagcc gccatcagga
    31681 aattaatgag tggaatcgcc agcaaggttc tacggagtcg atattaaacc tgcgccgaat
    31741 gaccaatatt ggaacctttc gtgcctatct gaacgaatat ctgcgtaacc atccgcggat
    31801 tcgtaaagat atgaccttaa tggtacgcca actggctcca ggtgataacg gtttaccgct
    31861 cgagatctac gcgtttacca acaccgtggt gtggctggaa tatgaaagca ttcaggctga
    31921 tatattcgat cacatatttg cgattgtcga agagtttggt ctgcgacttc atcagtcgcc
    31981 agccggcaat gatattcgct ctctggcggg tgcatttaag cagtaattaa aaaaaccgct
    32041 ctcatcgaat ggatgagagc ggacatcgtt ttgtcggatg tagcgtgaat gccttatttc
    32101 cgacgcagcg ttttaaatgc cacaaacagg aatacaatcc acaccggcag caggatcgct
    32161 gacaagcgca tatcatccat cgtgcacatc agcagcaaaa tcatgccgag gaaggcaatg
    32221 caaagatagt tgccgaacgg ataaagcagc gccttaaact gtgtttcacg tccctgacgt
    32281 cgcatcgccg cgcgaaaacg cagatgcgcc aggcagatca taatccagtt caacagcagc
    32341 gttgctacca ccagcgccat cagcagacca aacgcttttt gcggcagcag atagttgatt
    32401 aacaccacca gcgaagtgat cgctccggaa agcatcagcg agttaatcgg cacgccgcga
    32461 tggctgacgc gagtcaaaaa cttcggcgca ttaccctgca cagaaaggcc aaacagcatg
    32521 cggctgttag agtaaacccc gctgttatac actgacagcg atgctaccag aatgacgaag
    32581 ttcagcgcag aagctacctc gttgctgtcg agattatgga aaatcatcac aaacgggcta
    32641 ctgttggatt tcacttccac ccacggatag agcgccagta aaaccaccag tgaacagatg
    32701 taaaacagca ggatgcgata caccacctga tttaccgctt ttggaatgct tttttccgga
    32761 tcgcgcgctt cagcggcagt aatcccaatc agctccagac cgccgaagga gaacataatt
    32821 accgccagcg acaaaatcag cccattccag ccggtggcga agaaaccacc gtagcgccag
    32881 aggttgtcga tactggcttt ctcgccgccg tgaccagaaa acagcagcca caggccaaag
    32941 ccgatcatac cgatgattgc cagcacttta atcaacgcaa accagaactc ggtttcgcca
    33001 tataagcgca cgttcaccag gttaacggcg ttgatgataa taaagaaggc ggcagcccaa
    33061 atccacgttg gaacatccgg gaaccagtac tgcatataga tgcccgcagc ggtcagctct
    33121 gccattccca ccagcacgaa cattacccag tagttccagc cagagaggaa gcccgcaaac
    33181 ggtccccagt atttataggc aaagtgggca aatgaaccgg ataccggctc ttcgaccacc
    33241 atctcgccga gctggcgcat aatcaggaaa gcgatgatcc cggcgacgcc gtagcccagc
    33301 aatacagccg gacccgccat ctgaatcgcc gggccaatgc caagaaacag accagtacca
    33361 attgcgccac ccagcgcaat cagttgaata tgacggttat gtaatccgcg atgaagcgtc
    33421 ggctcttgat ttgacgcagt atcttccgat acggttgacg cgtttttcac gcctttcccc
    33481 tgtgtgtctt ttttgttgag gggcaccttt taacatttag tgcccatcgt cgcaagacac
    33541 aatccacacg gttaaacggg gtatcctgct tttatttccg tacccgatgt cggtgcagcc
    33601 acatcagctt atacgccgcc gggataataa acagcgacag caaaggcgcg gtgatcatgc
    33661 cgccaatcat cggtgcggca atccggctca tcacctctga accagccccc gttccccaca
    33721 gaatcggcag cagaccggcg ataatcaccg ccaccgtcat cgctttcggg cgcacgcgca
    33781 gtaccgcgcc gtgatacaac gcctcatcca gcttctgctc actgaatgtt tgcggattat
    33841 tcaacgacgg ctcggcctct atggcgtgac gtaaatacat cagcatcacc acgccaaatt
    33901 cggcggcgcc cccggcaagg gcaataaaac cggtgcccgt tgccacagaa agatgaaagc
    33961 ccatccacca cagcaaccag atgccgccca ccagcgcaaa cggtacgctg ctgataatca
    34021 gcaacgcttc gcccacccga cggaatgcca gatacaacag cacgaagatg atcatcagtg
    34081 tcatcggcac catgagtttc agcttatggt tggcgcgctc cagtagctcg aactgcccgg
    34141 agaatgccac gctggtgccc ggttttaact gcactttttc aactatcgct ttttgcaaat
    34201 cgtgaaccac cgacaccatg tcacgatcgc gggcatcgat ataaatccag ctcgtcgggc
    34261 gcgcattctc ggttttcagc atcgacggtc cggtagagac tttaacgtcg gccacgtctg
    34321 ccagggtgat ttgctgcttc atcggcgtca ggatcggtag ctggcgcagt gcctgctttg
    34381 cggataacgc agattaatgg gataacgggc aatcccttcc accgtttcgc caaccatcgc
    34441 cccgcccacc gcagaagtca caaacaactg cacatccgcc accgtcatac cgtaacgcgc
    34501 ggctttttca cggttaatct caacgttgat atagcgccca ccttccagac gctcggcaag
    34561 cgcagaagcc acgcctggca ccgttcgcgc tacttcttca atttgctcag ccatcgcgtc
    34621 gatatccgcc agcacagtgc cggaaacttt aatgccgatg gggcttttaa tgccggttga
    34681 gagcatatcg atacggttac gaattggcgg cacccacaga ttcgccagcc ccggcagccg
    34741 cacggtgtta tccagttcct caatgatttt gtccatcgtc atgccaggcc gccactgatc
    34801 ctgcggctta agctggatgg tcgtttcaac catctcgagc ggagcagaat cggtggcggt
    34861 ttccgctttc ccggttttgc caaatacccg cgccacttca ggtacgctca taattagctt
    34921 gtcgtttttt tgcagcatac tcgccgcctc tgctgcggaa atccccggca gcgtcgatgg
    34981 catatacaac aagtcgcctt cattgatctg cggtaaaaat tccccgccaa ctttattgag
    35041 cggccagaga accgtcagca ccgaaagcgc tgccaccaac agcgtggttt tcggccagtg
    35101 cagtactttc agcaatagag gatgataaac acgaatcaaa aagcgattga gcgggttact
    35161 gctttccggc ggaattttgc cacggatcca gtaacccatc aggatcggga tcactacgat
    35221 cgccagcagc gccgcacccg ccatcgcata cgttttggtg aacgccagcg ggccaaacag
    35281 acgcccttct tgcccttcca gggtgaagat tgggataaac gacagcgtga taatcagcag
    35341 actgataaac agcgccggcc ccacttcaac agatgcatcg gtaatcacct gccagcgcgt
    35401 tttattatcc agcgtggcgt caggatgctg gtgctgccac tcttccagcc gtttatgcgc
    35461 attctcgatc atgacgatag cagcatcgac catcgccccg acggcaatcg caatgccacc
    35521 caacgacata atattggcat tcagtccctg gaagggcatg acaataaaag caatacacaa
    35581 ccccagcggc aacgaaataa tcgccaccag cgccgagcgc acatgccaga gaaacagcgc
    35641 acagactacc gccaccacaa taaactcttc cagcaacttg ccgctgaggt tgtcgatggc
    35701 gcggtcaatg agctggctgc gatcgtatgt tgtaactatc tccacgcctt ccggcagact
    35761 acttttcagc gtttccagtt tgtccttcac ggcggcgatc acttctcggg cgtttttacc
    35821 ggagcgcagg atcaccaccc cgcccgccac ttcgccttcg ccgttcagtt cggcaatgcc
    35881 ccggcgcatc tccgggccaa cctggacctt cgcaacatcg cgcagataaa cgggcacgcc
    35941 attttcactg gcttttaaaa cgatgtgatt aaagtcgtcg agcgtttgca gatagccgct
    36001 ggcgcgcacc atatattccg cttccgccag ttcgatcgac gaaccgcccg cttcctggtt
    36061 tgaagcatcc agcgcgcttt ttacttcggc gagactgatg ccatactgcg ccaggcgctg
    36121 gggatcgata accacctgat actctttcac cacaccgccc accgacgcca cttccgcaac
    36181 gtcagggatg gttttcagct catatttgag aaaccagtcc tgtaatgagc gtaaatcggc
    36241 cagatcgtgc ttaccgctgc gatccaccag tgcatattca tagatccagc caacacccgt
    36301 ggcatctggc cccagctcgg cgctgactcc cgcaggcagc ttaccctgta cctggttgag
    36361 gtactccagc acccgcgaac gcgcccagta cggatcggta ccatcttcga aaatgacata
    36421 cacataagag tcgccaaact gcgagaaacc acgcacagtc ttcgcgccag gcaccgacaa
    36481 catggtggtg gttagcggat aagtcacctg attttcaacg atttgcggtg cctgcccggg
    36541 atagctggtt ttaataatca cctgcacatc ggagagatcc ggcagcgcat ccactggcgt
    36601 attaatgatg gtccaggtgc cccagatgct aagaaacaac gcgcccatca gcaccaaaaa
    36661 acggttcgcc accgagcgac gaataatcca ttcaatcatt ggttattccc tcaatgcgca
    36721 tgggtagcac tttcagagcg catccgctcc agtgcgccag aaatattggc ttcggaatca
    36781 atcaggaaaa ggccgctgga aaccaccttt tcaccttccg ccagaccaga gcgtaatgcg
    36841 gtgacacctt gcgatgcctg gaaaacggca acgcgtttcg gtacaaagcg cccgtcggca
    36901 tcaatggtaa tcacccgctg ttcgctaccg gtatcaatca gcccttgtga cggaatgagc
    36961 agcatcggtt cgctggcggt attgagttgc aaccaggcgt tcatgcccgg ttttagcgcc
    37021 tcgtcggcgt tgtcgacttc cagacgcagc tgcagcgtgc gggtcgcggc atccacgccg
    37081 ggtagcagcg tccatttgcg gatggtgagt gttttatccg gtcgtgccgg aacggtgagc
    37141 gtaaactgcg aggcatcttt caccagccag gcgatagact ccgggatcgc agcagtgacc
    37201 cacaccgggt ccataccctg aattttcgct accacgttat ctttggcgat attcattccc
    37261 gcgcgcagat caaacgcggt gatcacgcca tcaatgggcg ctttgagcgt aaagcgagtc
    37321 tggatttttt gcgtggcgat caggcggcga atatccgcct ccggcattcc cgccagtcgc
    37381 agccgctcaa gaatgccttc agtctgggtc gccgtaccgc cggtttcgcg cagcagtaaa
    37441 tactcactct gcgcttccac ccagtcagga atggtcaggt cgagaagcgg tgtgcccttt
    37501 tgtactttat cgcccacggt aagcggatac accttgtcga taaacccggc agcgcgagcc
    37561 tgcacaatgg catactgata ctcgttgtaa ctgacattcg ccgggaaact ctgggcaaaa
    37621 gtcagcggtc cgcgcgtgac ggtagccgtt ttcaccccca gattctgcgt ctgagtcggg
    37681 tcaatgcgca caccagacgc agaactctct tcatcggcat atttcggcac cagatccata
    37741 tccataaacg gcgatttacc tggtttatcg aaccgcgtat tggggtacat cgggtcgtac
    37801 cagaataaga ttttacgttc
//
LOCUS       DADKRT010000014        37610 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.014, whole genome shotgun sequence.
ACCESSION   DADKRT010000014 DADKRT010000000
VERSION     DADKRT010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 37610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37610
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.014"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1985
                     /locus_tag="JQ356_000629"
     CDS             <1..1985
                     /locus_tag="JQ356_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catecholate siderophore receptor Fiu"
                     /protein_id="HAY4620813.1"
                     /translation="VGAFLAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDT
                     FNTEQVEVIKGPSGTDYGHSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVN
                     QVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHN
                     TPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDI
                     NDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILT
                     NQTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTR
                     NGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCP
                     AGVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQS
                     GSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQY
                     GKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLW
                     SQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLN
                     VYNLFDTDYVASINKSGYRYHPGKPRTFLLTANMHF"
     gene            1991..2704
                     /gene="ybiX"
                     /locus_tag="JQ356_000630"
     CDS             1991..2704
                     /gene="ybiX"
                     /locus_tag="JQ356_000630"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKHD-type hydroxylase YbiX"
                     /protein_id="HAY4620814.1"
                     /translation="MWGAGPTFWRNCMMYHIPGVLSPQDVARFREQLEQAEWVDGRVT
                     TGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNN
                     ETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGD
                     LVLYPSSSLHCVTPVTRGVRVASFMWIQSMIRDDKKRAMLFELDKNIQSLKSRYGENE
                     EILSLLNLYHNLLREWSEI"
     gene            2778..3044
                     /gene="ybiI"
                     /locus_tag="JQ356_000631"
     CDS             2778..3044
                     /gene="ybiI"
                     /locus_tag="JQ356_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc finger protein YbiI"
                     /protein_id="HAY4620815.1"
                     /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
                     PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR"
     gene            3309..3569
                     /locus_tag="JQ356_000632"
     CDS             3309..3569
                     /locus_tag="JQ356_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY4620816.1"
                     /translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG
                     ASTLDALEAKLTEKAAAAGASGYSITSATNNNKLSGTAVIYK"
     gene            complement(3797..4882)
                     /locus_tag="JQ356_000633"
     CDS             complement(3797..4882)
                     /locus_tag="JQ356_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
                     /protein_id="HAY4620817.1"
                     /translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG
                     HDSHGIGMIPSYVRSWSQGYLQINHHAKIVKEAGAAVTLDGDRAFGQVAAHEAMALGI
                     EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF
                     GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA
                     VMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII
                     INPELFGAPDCSAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGS
                     WQAICDAARQIGMSEETLQAFCQQLAS"
     gene            complement(5023..5985)
                     /gene="ybiB"
                     /locus_tag="JQ356_000634"
     CDS             complement(5023..5985)
                     /gene="ybiB"
                     /locus_tag="JQ356_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
                     /protein_id="HAY4620818.1"
                     /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
                     VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA
                     ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
                     FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI
                     GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQ
                     WIERCLAGSEPIPESLKIQMACCLEATGEAATISDGLARVNQAF"
     gene            complement(6013..8163)
                     /gene="dinG"
                     /locus_tag="JQ356_000635"
     CDS             complement(6013..8163)
                     /gene="dinG"
                     /locus_tag="JQ356_000635"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HAY4620819.1"
                     /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
                     EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
                     IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
                     GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE
                     VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL
                     DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
                     RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA
                     LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
                     SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRFE
                     PSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD
                     QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI
                     TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
                     LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
     gene            8283..8765
                     /gene="ybiA"
                     /locus_tag="JQ356_000636"
     CDS             8283..8765
                     /gene="ybiA"
                     /locus_tag="JQ356_000636"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosidase YbiA"
                     /protein_id="HAY4620820.1"
                     /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW
                     PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALR
                     AKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGNGKGKNRLGYLLMELREQLAIEK
                     "
     gene            complement(8997..10361)
                     /gene="rhlE"
                     /locus_tag="JQ356_000637"
     CDS             complement(8997..10361)
                     /gene="rhlE"
                     /locus_tag="JQ356_000637"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HAY4620821.1"
                     /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
                     MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
                     QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSSDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
                     QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
                     AAAQ"
     gene            10590..11261
                     /gene="cecR"
                     /locus_tag="JQ356_000638"
     CDS             10590..11261
                     /gene="cecR"
                     /locus_tag="JQ356_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CecR"
                     /protein_id="HAY4620822.1"
                     /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNTTTREIAAQAGQN
                     IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA
                     CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA
                     NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL
                     SQRSL"
     gene            11261..12259
                     /gene="hlyD"
                     /locus_tag="JQ356_000639"
     CDS             11261..12259
                     /gene="hlyD"
                     /locus_tag="JQ356_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HAY4620823.1"
                     /translation="MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRT
                     VNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQVKAGVSVAQAQYDLML
                     AGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA
                     TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTR
                     AVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQ
                     IGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGNEAGHE"
     gene            12252..13988
                     /locus_tag="JQ356_000640"
     CDS             12252..13988
                     /locus_tag="JQ356_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY4620824.1"
                     /translation="MNDAVITLNGLEKRFPGMGKPAVAPLDCTIHAGYVTGLVGPDGA
                     GKTTLMRMLAGLLKPDSGNATMIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELASEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD
                     DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE
                     LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD
                     LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL
                     KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ
                     LIHDWDKEHSNE"
     gene            13981..15114
                     /locus_tag="JQ356_000641"
     CDS             13981..15114
                     /locus_tag="JQ356_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4620825.1"
                     /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG
                     YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG
                     LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
                     FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
                     TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
                     GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
                     STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            15125..16231
                     /locus_tag="JQ356_000642"
     CDS             15125..16231
                     /locus_tag="JQ356_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4620826.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
                     ADFSRKLDTFQTAPLQLILDGRNSNSAQIATNYLQQIVKNYQQELLEGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
                     LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
     gene            complement(16193..16603)
                     /locus_tag="JQ356_000643"
     CDS             complement(16193..16603)
                     /locus_tag="JQ356_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620827.1"
                     /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL
                     CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
                     AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
     gene            16736..17487
                     /locus_tag="JQ356_000644"
                     /pseudo
     CDS             16736..17487
                     /locus_tag="JQ356_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308895.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
     gene            17484..18725
                     /gene="clsB"
                     /locus_tag="JQ356_000645"
     CDS             17484..18725
                     /gene="clsB"
                     /locus_tag="JQ356_000645"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HAY4620828.1"
                     /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
                     DNVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNKLTAAGVVFRYYDPRPRLF
                     GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL
                     QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
                     ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
                     GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
                     NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWHPAHTPRLTQVDP
                     PAQPTMETQDRVETENTGVKP"
     gene            18791..19681
                     /locus_tag="JQ356_000646"
     CDS             18791..19681
                     /locus_tag="JQ356_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000636449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HAY4620829.1"
                     /translation="MIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYG
                     CYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTIT
                     RIFSLSITTNWLGYILLAGIIFTAGVVVLPDHWYVAQTTLRILGIGLLMIIAVYLWFC
                     AFAKHRHMTIKGQKLVLPSWKFALTQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVL
                     LVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGSIIAALLAYRVLYYFIPLLLALI
                     CYLLLESQAKKLRAKNEAAM"
     gene            complement(19717..20430)
                     /locus_tag="JQ356_000647"
     CDS             complement(19717..20430)
                     /locus_tag="JQ356_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HAY4620830.1"
                     /translation="MESYSQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYL
                     EITATKYDSPTMYVAIGLLLVCMYGLSKDINKINAVIAGVIYLFLLSLVAIVVASLVP
                     VYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERP
                     IWVISCLVIVLWPGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFG
                     ILAAIAITLVWQRHTRFFH"
     gene            complement(20636..21340)
                     /locus_tag="JQ356_000648"
     CDS             complement(20636..21340)
                     /locus_tag="JQ356_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HAY4620831.1"
                     /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
                     SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS
                     IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
                     LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD
                     FINLFLMLLRIFGNRR"
     gene            complement(21477..21929)
                     /gene="moaE"
                     /locus_tag="JQ356_000649"
     CDS             complement(21477..21929)
                     /gene="moaE"
                     /locus_tag="JQ356_000649"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HAY4620832.1"
                     /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFAGVTSA
                     HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW"
     gene            complement(21931..22176)
                     /gene="moaD"
                     /locus_tag="JQ356_000650"
     CDS             complement(21931..22176)
                     /gene="moaD"
                     /locus_tag="JQ356_000650"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HAY4620833.1"
                     /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWAL
                     ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
     gene            complement(22169..22654)
                     /gene="moaC"
                     /locus_tag="JQ356_000651"
     CDS             complement(22169..22654)
                     /gene="moaC"
                     /locus_tag="JQ356_000651"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HAY4620834.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
                     D"
     gene            complement(22657..23169)
                     /gene="moaB"
                     /locus_tag="JQ356_000652"
     CDS             complement(22657..23169)
                     /gene="moaB"
                     /locus_tag="JQ356_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HAY4620835.1"
                     /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
                     VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            complement(23191..24180)
                     /gene="moaA"
                     /locus_tag="JQ356_000653"
     CDS             complement(23191..24180)
                     /gene="moaA"
                     /locus_tag="JQ356_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HAY4620836.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
                     YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
                     VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
                     RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF
                     GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG"
     regulatory      complement(24168..24312)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            24577..25485
                     /gene="yvcK"
                     /locus_tag="JQ356_000654"
     CDS             24577..25485
                     /gene="yvcK"
                     /locus_tag="JQ356_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HAY4620837.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
                     IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV
                     YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     gene            complement(25677..27698)
                     /gene="uvrB"
                     /locus_tag="JQ356_000655"
     CDS             complement(25677..27698)
                     /gene="uvrB"
                     /locus_tag="JQ356_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HAY4620838.1"
                     /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
                     NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
                     MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
     gene            complement(28277..28954)
                     /gene="bioD"
                     /locus_tag="JQ356_000656"
     CDS             complement(28277..28954)
                     /gene="bioD"
                     /locus_tag="JQ356_000656"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706656.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY4620839.1"
                     /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
                     EKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG
                     LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
                     QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
                     YINLALL"
     gene            complement(28947..29702)
                     /gene="bioC"
                     /locus_tag="JQ356_000657"
     CDS             complement(28947..29702)
                     /gene="bioC"
                     /locus_tag="JQ356_000657"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HAY4620840.1"
                     /translation="MATVNKQAIAAAFGRAAAHYEQHAELQRRSADVLLAMLPQRKYT
                     HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA
                     TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERP
                     HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
                     TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
     gene            complement(29689..30843)
                     /gene="bioF"
                     /locus_tag="JQ356_000658"
     CDS             complement(29689..30843)
                     /gene="bioF"
                     /locus_tag="JQ356_000658"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HAY4620841.1"
                     /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF
                     SSNDYLGLSHHPQIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRA
                     LLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLAR
                     LLASPCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
                     SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYNTSMPPAQAQAL
                     RASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL
                     AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG"
     gene            complement(30840..31880)
                     /gene="bioB"
                     /locus_tag="JQ356_000659"
     CDS             complement(30840..31880)
                     /gene="bioB"
                     /locus_tag="JQ356_000659"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HAY4620842.1"
                     /translation="MAHRPRWTLSQVAELFEKPLLDLLFEAQQVHRQHFDPRQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
                     KNPNERDMPYLEQMVQGVKDLGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT
                     PDTDEYYNAAAL"
     gene            31967..33256
                     /gene="bioA"
                     /locus_tag="JQ356_000660"
     CDS             31967..33256
                     /gene="bioA"
                     /locus_tag="JQ356_000660"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HAY4620843.1"
                     /translation="MTKDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRR
                     LIDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP
                     LECVFLADSGSVAVEVAMKMALQYWQAKGEVRQRFLTFRNGYHGDTFGAMSVCDPDNS
                     MHNLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG
                     GMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKAL
                     TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ
                     QVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRP
                     FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ"
     gene            33315..33791
                     /locus_tag="JQ356_000661"
     CDS             33315..33791
                     /locus_tag="JQ356_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HAY4620844.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
                     YDGAAPPKGETHRYIFTVHALDVEHIDVDEGASGAMVGFNVHFHSLASASITAMFS"
     gene            33943..35226
                     /locus_tag="JQ356_000662"
     CDS             33943..35226
                     /locus_tag="JQ356_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HAY4620845.1"
                     /translation="MNTFSVSRLALALAFSVTLTACSSTPPDQRPSDQTAPGTSSRPI
                     LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
                     AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
                     DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT
                     NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
                     AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD
                     DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK"
     gene            complement(35367..37604)
                     /locus_tag="JQ356_000663"
     CDS             complement(35367..37604)
                     /locus_tag="JQ356_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HAY4620846.1"
                     /translation="MFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMD
                     KLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVF
                     GLSAAQRYGGIFVPPHIAIIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGE
                     LVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVG
                     PGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYY
                     DGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLL
                     DKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
                     AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQM
                     SAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQ
                     PLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEF
                     TLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMV
                     YAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEV
                     GDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFN
                     KNRQM"
BASE COUNT         8811 a        10183 c         9740 g         8876 t
ORIGIN      
        1 gcgtgggtgc gtttttggcg ggtgagaacg gtaactccac cactggcgac gccatttata
       61 tgcgtggtgc cgatacctct aacagtattt atattgatgg cattcgcgat atcggcagcg
      121 tctcgcgcga caccttcaat accgagcagg tcgaagtgat taaagggccg tccggcaccg
      181 actacgggca cagcgcaccg acgggctcga tcaatatgat cagcaaacag ccgcgcaatg
      241 attccggcat tgacgcctcc gccagtattg gcagcgcctg gttccgccgc ggcacgctgg
      301 acgtcaatca ggtcattggt gataccaccg cggtgcgcct gaatgtaatg ggcgaaaaaa
      361 cgcacgatgc cggacgcgac aaagtcaaaa atgagcgtta cggcgtcgcc ccttctgtcg
      421 cttttggcct tggtacagcg aatcgtttgt atcttaatta tctgcatgtc acccagcaca
      481 acacgccaga cggcggcatt ccgaccatcg gtttgccggg ctattctgcc ccatctgcgg
      541 gaacggcggc cctgaatcat tccggaaaag ttgatactca taacttttac ggcacggatt
      601 ccgattacga cgattcgacc accgacaccg ccaccatgcg ttttgagcac gacatcaacg
      661 ataacaccac cattcgcaat actacccgtt ggtcgcgcgt aaagcaggat tacctgatga
      721 cggcgattat gggcggggcg tcgaatatta ctcagcccac cagcgatgtg aatagctgga
      781 cctggtcacg cacggcgaat accaaagatg tgagtaataa aattctcacc aaccagacca
      841 acctgacctc gacgttctat accggttcta tcggtcatga tgtcagtacc ggcgtggaat
      901 ttacccgtga aacgcagact aactacggcg ttaatccggt gacgttaccc gcggtaaata
      961 tttatcatcc tgacagcagc attcatcccg gcggcctgac gcgcaacggc gcaaacgcca
     1021 atggtcagac ggataccttc gcaatttacg cctttgatac gctgcaaatc acccgtgatt
     1081 ttgagctgaa cggcgggatc cgtctggata attatcatac tgaatatgac agtgccaccg
     1141 cctgcggcgg cagcggacgc ggtgccatca cctgcccagc tggtgtggca aaaggttctc
     1201 cggtcaccac cgtcgacacc gccaagtcgg gcaatctggt gaactggaaa gccggggcgc
     1261 tgtatcacct gacggaaaac ggtaatgtct atattaacta tgccgtttcc cagcagcctc
     1321 cgggcggcaa caacttcgcc cttgcgcagt ctggcagcgg taacagtgcc aaccgcaccg
     1381 attttaaacc gcaaaaagcc aacaccagcg agattggcac caaatggcag gttctggata
     1441 aacgcctgtt gctcaccgcc gcactgttcc gtactgatat cgaaaatgaa gttgagcaaa
     1501 atgatgacgg aacttactcg caatacggta agaaacgtgt cgaaggctat gagatatccg
     1561 tggccgggaa tatcactccc gcgtggcagg tgattggcgg ctatacccag caaaaagcaa
     1621 ccatcaaaaa cggcaaagat gttgcccagg atggttcctc atcgctgccg tataccccgg
     1681 agcacgcctt caccttatgg agccagtatc aggcaaccga tgatatctct gttggcgcgg
     1741 gcgcacgcta tatcggcagt atgcataaag gttcagacgg cgcggtggga acgccagcgt
     1801 ttaccgaagg ttactgggtc gccgatgcca aactggggta tcgggttaat cgcaatctcg
     1861 acttccagct aaacgtttac aacctgtttg ataccgatta cgtcgcctca atcaacaaga
     1921 gcggctaccg ttatcacccg ggcaagccaa gaaccttctt gctcacagcc aatatgcatt
     1981 tctgattcag atgtggggcg caggccccac tttttggaga aattgtatga tgtaccacat
     2041 tcccggcgtg ttatcgccac aggacgtcgc tcgttttcgc gaacaactgg aacaagccga
     2101 atgggtggat ggacgcgtca ccaccggcgc acaaggtgcg caagttaaga acaatcaaca
     2161 ggtagacacc cgcagcacgt tatacgccgc cctgcaaaat gaggtgctga acgcggttaa
     2221 ccaacatgct ttattctttg ccgcggcctt gccgcgtacc ctttccacgc cgctgtttaa
     2281 tcgctatcag aacaatgaaa cctatggttt tcatgtggat ggcgcagtac gcagccatcc
     2341 acaaaacggc tggatgcgca ctgacctttc tgccacgctg tttttaagcg atccacaaag
     2401 ctacgacggc ggcgaactgg tcgttaatga caccttcgga caacatcggg taaaactccc
     2461 ggcaggtgat ctcgtgttgt atccctccag cagcctgcat tgcgtgacac ccgtaacccg
     2521 cggcgtacga gtggcatcat ttatgtggat ccagtcgatg atccgcgatg ataaaaagcg
     2581 cgccatgctg tttgaactag acaaaaatat tcagtcgctg aaaagccgct atggtgaaaa
     2641 tgaagagatc ctgtcgctgc tcaatcttta tcataatctg ctgcgggaat ggtcggagat
     2701 ctgacgcttg aactgcccag gttcgtccct atattagcta cacttaactg tacaagcatt
     2761 gatatgggga ggacgatatg gcatccggtt gggctaacga tgacgccgtc aacgaacaga
     2821 tcaacagtac aattgaagat gcgattgccc gcgctcgggg tgaaattccg cgtggcgaaa
     2881 gcctgtatga atgtgaagag tgcggtgccc ccatcccgca agcccgtcgg gaagccattc
     2941 ctggcgtgcg cttatgtatt cattgtcagc aggagaaaga tttacaaaaa ccagcgtata
     3001 caggatataa tcgcagaggt tcgaaagaca gccagttacg ttaactacaa ctggcgagat
     3061 gcatagcgag tataatttgt attttgcgtg gcattccgtg cctttaacgc tgctgtgact
     3121 gccacgcggc ataaaacaag tccataagta caacaaataa atggtttatc agtatgttag
     3181 atgtcaatca atttatttga acaaggcggt caattctctt cgattttatc tctcgaaaaa
     3241 aaacgtgata ctcatcacat cgacgaaaca acgtcactta tacaaaaatc acctgcgaga
     3301 gattaattat gaaaactatc aatactgttg ttgctgctat ggctctttca actctatcat
     3361 ttggcgtgtt cgcggcggaa ccggtaacgg catcccaggc acagaacatg aataaaatcg
     3421 gcgtggtttc tgccgatggc gcatccaccc tcgatgccct ggaagcgaaa ctgactgaga
     3481 aagccgcggc agccggtgcc agtggataca gcatcacttc tgccaccaac aacaataaat
     3541 taagcggtac tgcggtaatt tataagtaat tcgtaggacg gataaggcgt ttacgccgca
     3601 tccggcaaca gatgcctgat gcgacgctac cgcgtcttat caggcctaca aaatccgaac
     3661 cgttggacgg atcaggcggt tacgctacgt ccagcacaag tatttccctg tctgtttgcc
     3721 gacagacgca tatgctctaa ccctcattga tcctatatta cccttgtttg cccgtccgtt
     3781 actagacggg ctttttttag ctggctaact gctgacagaa agcctgcaac gtctcttccg
     3841 acataccaat ctgccgcgcc gcatcacaaa tggcctgcca gcttcccgca tccaatggaa
     3901 tcccctgctc ctgccgttcg cgacgcgtgt tcacttccca ctcgcccggt agcaaaatcg
     3961 gcttatcgtc atcatgcggc gaggctttca cccactcggc aaaggcttca gtctgcgcgc
     4021 tacaatccgg cgcgccgaac agttccgggt tgatgatgat agtggtcatg cagttaagaa
     4081 tggcatcggg actggtttgt aacgtttcct gatgcgtcgt tttaccgcca gaaagcgccc
     4141 cgccaagaat ttcacacatc gctgcaaggg cgtagccttt atgttcggca aaggtcaaca
     4201 gcgaccccaa cggcgactcc tgcattaccg ccggattggt cgtcggcacg ccgttaacgt
     4261 caatcaggca acctggcggc acggggacgc ctttatgcca ggcgacgcga gttttaccaa
     4321 atgcgatggc gctggtggcg taatcaagca acagcgggaa attatcttta cgagggaaaa
     4381 ccacacagaa cggattggtg ccaaagcggc tgtcgcgacc gtggaacggt gcgaccattg
     4441 gaataccgac cacgctaaca aagtggatag agacaaaccc cgccgctgca cactgctccg
     4501 cccagtaacc gatacggccg atatgatgcg agttatgtag cgccacggca gcaataccgt
     4561 gctgatgcgc tttctcaatc cccagcgcca tcgcttcgtg tgccgcgacc tgaccgaatg
     4621 cgcgatcgcc atcgagcgtg actgccgccc ccgcctcttt aacgattttg gcatgatggt
     4681 taatttgcag atacccctga ctccaggaac gcacatagct tgggatcatg ccaataccat
     4741 gagaatcatg ccctgccagg tttgccgcga ttaaatgatc ggccactaat ttcgcttctt
     4801 gttcctcgct acccatctga cgaaatacag cctgaataaa actgtgcagc gtctgagcat
     4861 caaagcgatg accactttcc atggttaact cctgtttatg ttatgtgttt gttgtttttt
     4921 tatgctgcac gccgggcgcg ggaaggtcaa taaagatgca ggaatttcat attgcggtgg
     4981 ggtaaaagcc ggatgacatg gctcatccgg ctgagaaaag aattaaaatg cctgattaac
     5041 gcgcgccagg ccgtcgctga tagttgccgc ttcacccgta gcctccaggc agcaagccat
     5101 ctggattttc agcgattcgg gaatcggttc gctgccagca aggcaacgct caatccactg
     5161 cgccgtggtt tctgggtctt ttgcttgtgg cagtaactcg ctaccagcag tgtcctgttt
     5221 ttcatacagc acccgcatcc cttcacggtc aatgagattg atctgcgggc agcgctgcgg
     5281 attagcatac acttcgcctt cagtaccatg cattagtagc gcccgcccgc cgatatcgct
     5341 aaagaacttc gcgactcgcc cgatgtattc cggatgcgaa acgctggaaa gacgcagcgc
     5401 ctcaccttcg gcaaatggcg tcgccagttt cgccagggta tgtgcactgt tacgcacgcc
     5461 catccgccag cgcatcgcca gttgtttttc cagcggcggg caaaacgcgc cgacaggcat
     5521 aaacaccggt tgatgttcgt cgagcttcgc ctgcgcctgc ccgccgtgca acgttggtgt
     5581 aatacccatc agttcgaaaa tggtttctgt cagcacgcga gttggatctt cgctaacccc
     5641 gtgaaccacc acaggaaaac cgagtttgtg caggagaata gccaacaacg gcgtcaggtt
     5701 ggcctgttta cgcgcgccgt tgtaactggg gatgacaatc ggcatcggct tgcctgcagg
     5761 cggcgtcagc ttgatggtgt gattttgcat ggcttcgtaa aagccgagca tctctgcttc
     5821 cccttcccct ttgatacgta gcgcaatcaa tacgccgccc aactcaaggt cagggacttc
     5881 accattgagc atatgggcat acagaccgcg cgcagtatcc cggtctaaat cgcgcgcgtg
     5941 gtttttcccg cgcccgatct ctttaatgat tttgcgatag tccatttacg actccttacc
     6001 tgactcacat cattaacgcc gccgacggcg tggggatttc gttttttctt tctttttaac
     6061 tataccttca gggacttccg gttgctctat cggaaatacc ggtaatgcat ccagtagtcg
     6121 cttgccataa tttttggtca gcaagcgttt gtcgtagata accacttcgc cccagcaacc
     6181 gtggcttcga atcagtcgcc caacctgctg aatcaggtta aacgaggcgc tcggcaggct
     6241 ttgcacctca aacggatagc ggttgaggct tttcagccat tccccttcgg tgatcaccac
     6301 cgggctgtcg atgggcggaa aagcgatttt gtggatatgc acctggctga gcagatcacc
     6361 tttcaaatca agcccttcgg caaatgactg taagcccacc agcacactac gctcaccgtt
     6421 ggcaacgcgt ttgcggtgca gttcaactaa gcgataacgc ggctgatcgc cctgcaccag
     6481 cagcatcagg cgtaaatccg tcacatagtc gagaaagcgc tgcatcgccc gtccgctggc
     6541 aaacagtacc aacataccga gatgtttttt gctctccacc tgctcacgga aaaaggccgc
     6601 catttcggca atatgctgct cttcgttgtc gatggaaggc tcaaagcgca tccggggaat
     6661 aacaattttg ccctgttcgc agtggttaaa gggggaatcc agcgccacaa aacggtcgcc
     6721 cgctttctct ttcagcccgc tcatctcctg caaacgcgaa aaactgttca gcgaacgcaa
     6781 ggttgcggag gtgacaataa tgtgcggaat actgcgccac agcagccttt ccagctgatc
     6841 gctgacacgt attcccacgc agtgaaacca gagatgcagc tgcccttcgc gctcttcccg
     6901 cgtcgcccat ttggtcaccg gcgcaccgga agattgcgcc agagacgcca gccgccagag
     6961 tttgctttgc gcctcgaaca tccccaacgc gcggttcatc tgcaaaatca accgatgcag
     7021 acgcacaata tcgtggctgc cggttttctc acttaaatcg ttaagaaata actccgccag
     7081 accacgcagc atctcggtga gttttgccag ccgctggcag atctccagca cttcatcagg
     7141 cagttcgccc atcgcaaaac ggtgctctgc ctcctgcccg gcaggcatgt agagattgag
     7201 aatgttgttt aacgaggcga taagctcata caactcttca caatgcgcat tcaaacgttc
     7261 agggatcgcc agcggtggga tggtcttcgg gcgaaactgc tccatgcagg tagcgaccag
     7321 tttcgtgaac aagtccagct gtagtcgata ccagggcgcg gtgatttcag cgctcatctc
     7381 cagcgcatcc cgggccacat ctggcaggtg atgaccttcg tccagcacca gcagcagatt
     7441 tttcgggtca ggcagtacgg cttcgctttc catcgccgcc atcaccagcg catggtttgc
     7501 caccaccact tccgcttcct gaatctcccg acgagcaaca aaaaacgggc attcacgata
     7561 gtagtaacag ttacggttaa ggcagctggc tttgtcggta ctcaaacgac gccagagatc
     7621 atcatctata gcgatatccg tatgatcgcg cagaccatcc catttataag tgtcgagatc
     7681 gcccttcagc ttcgcacaac gtttttgctc ttcctgatta tttggcgtca gttcgtcgtc
     7741 aagaaacgcc agcagatcct gttgcgtggg ttcagtgctg gcgagcgccg tcagattacg
     7801 cggacaaacg tagcgcccac gcccgaaagc ggcagtgaat ttaagatcgg gaatgatctt
     7861 tttcagcagc ggtaaatctt tgctgtaaat ctgatcctgc aacgccacgt tggcggtact
     7921 caccaccagc gttttttgct cttcgcgggc aatggcgatg ccggggatca aataggagag
     7981 cgttttccca acgccggtgg gggcttcaat cgccagatgc cgcccttctt ctccggccag
     8041 cgttttggcg acgtccgcaa tcatctgccg ctgcggcgca cggggaataa agtcggggat
     8101 ctgttcctga agcgccttat accaggcggc aatttgcgct ttaagcgcgg cggttaatgc
     8161 catgagaaaa cctgaaatac tgtataaaca gccaatattg tggcattttt cggttttcag
     8221 gggtaatggt ttttctgttt ctggaaagcg gctcgcaata accaccaaca taatgcggtt
     8281 taatgcccgt tcgagcacaa aggatccaac acgtcatgca agacaccatc ataaatttct
     8341 acagcaccag cgatgactac ggtgattttt ctaactttgc cgcctggccc atcaaggttg
     8401 acgggaaaac ctggcccacc tccgaacact attttcaggc acaaaaattc cttgatgaaa
     8461 aataccgcga agagatccgt cgggtttctt cccccatggt cgccgctcgc atggggcgta
     8521 atcgttccaa gccacttcgt aaaaactggg agtcggttaa agaacaggtg atgcgtaaag
     8581 cacttcgtgc taaattcgaa cagcatgcag aactgcgtgc gctcttgctg gcaaccgcgc
     8641 ccgcaaaact ggttgagcat acggaaaacg atgcttactg gggagacggt ggtaatggta
     8701 agggcaagaa tcgactgggc taccttttaa tggagttgcg cgaacaattg gctatagaga
     8761 agtaacgtct cggtggctta tgggcggtaa aacagataaa ttttttcccg tgttctcaaa
     8821 ttgctgacaa gtgcttgttg tgaaatgccg gatgcggcgt aaacgcctta tccggcctac
     8881 aaaagcatgc aaattcaata tattgcagag ttaacgtagg cctgataagc gtagcgcatc
     8941 aggcagtttt gcgtttgttc atcagcctga tgccgggcat agcccggcat aaaagattac
     9001 tgcgcagcgg caggtttacg cggacggcgg cgacgttgtt gttcgcctgc cggtttggca
     9061 tcgccgaggc ggcgagacgg tttttctgca ggtttcgcgc ttgcagattt tgcgccacct
     9121 tccccacggc gtggttgctg ttgaccgcga ccaccacctt gcccacgacc gccgccgcca
     9181 cgttgctggc gaccgttctg gatcggttcg gctttgattg acgggtccgg ctcatagccc
     9241 ggaatcgcaa tgcgcgggat ctcttttttc agcagttttt cgatatcacg cagcagtttg
     9301 tgttcatcaa cacacaccag cgacaacgct tcaccggtag cagccgcacg accggtacgc
     9361 ccgatacggt ggacataatc ttccggtacg tttggcagtt catagttgac gacgtgcggc
     9421 aactcttcga tatccagacc gcgcgcagcg atatcggtcg ccaccagtac gcgaatgtca
     9481 ctcgatttaa aatcagccag cgcacgggta cgcgcacctt gcgatttatt cccgtggatc
     9541 gccgcactac ggatgccatc tttattgagc tgctcagcca gatggttagc gccgtgtttg
     9601 gtacgggtaa acaccagcac ctgctgccag ttccctttac caatcatgtg cgacagcaat
     9661 tcgcgtttgc gtttcttatc gacaaagtga acgtgctggg tcacctgatc agacgcggta
     9721 ttgcggcgtg ccacttcgat ttccagcggg ttgtgcaaca gtttttccgc cagggcttta
     9781 atatcgtcag agaaggtcgc agagaacagc aggttctggc gtttcgctgg cagttttgtt
     9841 aacacgcgac ggatatcgtg gataaagccc atgtcgagca tgcggtcagc ttcatcgagg
     9901 acgaggattt caacctgatc cagcttcact gcattttgat gttccaggtc cagcaaacgt
     9961 cccggtgttg ccaccagaac atcaacgccg ccgcgcagct tcatcatttg cgggttaatg
    10021 ctgacaccgc caaacaccac cagcgaacga atgttcaaat atttgctgta atcacggacg
    10081 ttttcgccaa tctgcgcagc cagttcacgg gtcggggtaa gaatgagcgc acgtaccgga
    10141 cgacgccctt tggcgtgcgg ctggcgagtg atcaggtgtt gcaacagcgg cagcgtaaag
    10201 cccgctgttt taccggtacc ggtctgggcg ctagccatca ggtcgcggcc ttccagcacc
    10261 gcagggatcg cctgctgctg aataggggtg ggttcacggt aaccctgctc ggcaacggcg
    10321 cgcaggatat cagggcttaa acccaaagaa tcgaaagaca taactactcc gaaccgcccc
    10381 gaccgttacc ggtgtagttt tcagggagat actgaaaagg aaaatgacaa aaaccacaat
    10441 gtcatgaggg agcggagtgt agcagttttt gtgacgcagc gcataaatta tccctgtgac
    10501 tggcgttgct aaaattctta gccatactgg acaactcccc tatggagtca taatcttaat
    10561 caatcatttg attaagaatg gactgtgcga tgaataatcc tgccatgaca atcaagggtg
    10621 aacaggcgaa aaaacagctg attgctgccg cactggcgca gtttggtgaa tatggaatga
    10681 acaccaccac tcgcgagata gccgcccagg ccgggcagaa tatcgctgcc atcacctact
    10741 acttcggttc gaaagaagat ttgtacctcg cctgcgccca gtggattgcc gattttattg
    10801 gcgagcagtt ccgtccgcat gccgaggaag ccgaacgctt gttcgcgcaa ccacagcctg
    10861 atcgggctgc catccgtgaa ctgatccttc gcgcctgcag gaacatgatt aagctgctca
    10921 cccaggatga caccgtcaac ctcagcaagt ttatctcccg tgagcagctc tctcccacgg
    10981 cagcctacca cctggtgcac gaacaggtga ttagtccgct acacagccac ctgacacgcc
    11041 tgattgccgc ctggaccggc tgcgacgcca atgacacccg catgatcctt catacccatg
    11101 cgttgattgg tgagattctg gcgttccgtc ttggcaaaga aacaattctg ttacgtaccg
    11161 gctggaccgc gttcgatgaa gaaaagaccg aactgatcaa ccagacggtg acctgtcata
    11221 tcgacctgat tttgcaagga ttatcgcaaa ggagtttgta gtgatgaaaa aacctgtcgt
    11281 gatcggactg gcggtagtgg tacttgccgc cgtggttgcc ggaggctact ggtggtatca
    11341 aagccgccag gataacggcc tgaagctgta tggcaacgtg gatattcgta cggtgaatct
    11401 tagtttccgt gttggggggc gcgttgaatc gctggcggtg gacgaaggtg atgcgatcaa
    11461 agcgggccag gtgctgggcg aactggatca caagccgtat gagattgccc tgatgcaggt
    11521 gaaagcgggc gtctcggtgg cacaggcgca gtatgacctg atgcttgccg ggtatcgcga
    11581 tgaagaaatc gctcaggccg ccgcagcggt gaaacaggcg caagccgcct atgactatgc
    11641 gcagaacttc tataaccgcc agcaaggact gtggaaaagc cgcaccattt cggcaaatga
    11701 cctggaaaat gcccgctcct cgcgcgacca ggcacaggca acgctgaaat cagcacagga
    11761 taaattgcgt cagtaccgtt ccggtaaccg tgaacaggac atcgctcagg cgaaagccag
    11821 cctcgaacag gcgcaggcgc aactggcgca ggcggagctg aatttacagg actcaacgtt
    11881 gatagcaccg tctgatggca cactgttaac gcgcgcggtg gagccaggca cggttctcaa
    11941 tgaaggtggc acggtgttta ccgtttcact aacgcgtccg gtgtgggtgc gcgcttatgt
    12001 tgatgaacgg aatcttgacc aggcccagcc ggggcgcaaa gtgctgcttt ataccgatgg
    12061 tcgcccggac aagccgtatc acgggcagat tggtttcgtt tcgccgactg ctgaatttac
    12121 cccgaaaacc gtcgaaacac cggatctgcg taccgacctc gtctatcgcc tgcgtattgt
    12181 ggtgaccgac gccgatgatg cgttacgcca gggaatgccg gtgacggtgc aattcggtaa
    12241 cgaggcagga catgaatgat gccgttatca cgctgaacgg cctggaaaaa cgctttccgg
    12301 gcatgggcaa gcccgccgtc gcgccgctcg attgtaccat tcacgccggt tatgtgacgg
    12361 ggctggtggg gccggatggt gcaggtaaaa ccacgctaat gcggatgctg gcgggattac
    12421 tgaaacccga cagcggcaat gccacgatga ttggctttga tccaatcaaa aacgacggcg
    12481 cgctgcacgc cgtgctcggc tatatgccgc agaaatttgg tctgtatgaa gatctcacgg
    12541 tgatggagaa cctcaatctg tacgcggatt tgcgcagcgt caccggcgag gcacgtaagc
    12601 aaacttttgc tcgcctgctg gagtttacgt ctcttgggcc gtttaccgga cgcctggcgg
    12661 gcaagctctc cggtgggatg aaacaaaaac tcggtctggc ctgtaccctg gtgggcgaac
    12721 cgaaagtgtt gctgctcgat gaacccggcg tcggcgttga ccctatctca cggcgcgaac
    12781 tgtggcagat ggtgcatgag ctggcaagcg aagggatgtt aatcctctgg agtacctcgt
    12841 atctcgacga agccgagcag tgccgtgacg tgttactgat gaatgaaggc gagttgctgt
    12901 atcaggggga accaaaagcc ctgacacaaa ccatggccgg acgcagcttt ctgatgacca
    12961 gtccacacga gggcaaccgc aaactgttgc aacgcgcctt gaaactgcca caggtcagcg
    13021 acggcatgat tcaggggaaa tcggtacgtc tgatcctcaa aaaagaggcc acaccagacg
    13081 atattcgcca tgccgacggg atgccggaaa tcaacatcaa cgaaactacg ccgcgttttg
    13141 aagatgcatt tattgatttg ctgggtggtg ccggaacctc agaatcgccg ctgggtgcaa
    13201 tattgcatac ggtagaaggc acacccggcg agacggtgat cgaagcgaaa gaactgacca
    13261 agaaatttgg tgattttgcc gccaccgatc acgtcaactt tgccgttaaa cgtggggaga
    13321 tttttggttt gctggggcca aacggcgcgg gtaaatcgac cacctttaag atgatgtgcg
    13381 gtttgctggt gccgacttcc ggccaggcgc tggtgctggg gatggatctg aaagagagtt
    13441 ccggtaaagc gcgccagcat ctcggctata tggcgcaaaa attttcgctc tacggcaacc
    13501 tgacggtcga acagaattta cgctttttct ctggtgtgta tggcttacgc ggtcgggcgc
    13561 agaacgaaaa aatctcccgt atgagcgagg catttggcct gaaaagtatc gcctcccacg
    13621 cgaccgatga actgccatta ggttttaaac agcggctggc gctggcctgt tcgctgatgc
    13681 atgaaccgga cattctgttt ctcgacgaac caacgtccgg cgttgatccc ctcacccgcc
    13741 gcgaattttg gctgcatatc aacagcatgg tagagaaagg cgtcacggtg atggtcacca
    13801 ctcactttat ggatgaagca gaatattgcg accgcatcgg cctggtgtac cgtgggaaat
    13861 taattgccag cggcacgccg gatgatttga aagcgcagtc ggccaacgac gagcaacccg
    13921 atcccaccat ggagcaagcc tttattcagt tgatccacga ctgggataag gagcatagca
    13981 atgagtaacc cgatcctgtc ctggcgtcgc gtacgggcgc tgtgcgttaa agagacgcgg
    14041 cagatcgttc gcgatccgag tagctggctg attgcggtag tgatcccgct gctactgctg
    14101 tttatttttg gttacggcat taacctcgac tccagcaagc tgcgggtcgg gattttactg
    14161 gaacagcgta gcgaagcggc gctggatttc acccacacca tgaccggttc gccctacatc
    14221 gacgccacca tcagcgataa ccgtcaggaa ctgatcgcca aaatgcaggc ggggaaaatt
    14281 cgcggtctgg tggttattcc ggtggatttt gcggaacaga tggagcgcgc caacgccacc
    14341 gcaccgattc aggtgatcac cgacggcagt gagccgaata ccgctaactt tgtacagggg
    14401 tatgtcgaag ggatctggca gatctggcaa atgcagcgag cggaggacaa cgggcagact
    14461 tttgaaccgc ttattgatgt acaaacccgc tactggttta acccggcggc gattagccag
    14521 cacttcatta tccccggtgc ggtgaccatt atcatgacgg tcatcggcgc gattctcacc
    14581 tcgctggtgg tggcgcgaga atgggaacgc ggcaccatgg aggctctgct ctctacggag
    14641 attacccgca cggaactgct gctgtgtaag ctgatccctt attactttct cgggatgctg
    14701 gcgatgttgc tgtgtatgct ggtgtcagtg tttattctcg gcgtgccgta tcgcgggtcg
    14761 ctgctgattc tgttttttat ctccagcctg tttttactca gtaccctggg gatggggctg
    14821 ctgatttcca cgattacccg caaccagttc aatgccgctc aggtcgccct gaacgccgct
    14881 tttctgccgt cgattatgct ttccggcttt atttttcaga tcgacagtat gcccgcggtg
    14941 atccgcgcgg tgacgtacat tattcccgct cgttatttcg tcagcaccct gcaaagcctg
    15001 ttcctcgccg ggaatattcc agtggtgctg gtggtaaacg tgctgttttt gatcgcttcg
    15061 gcggtgatgt ttatcggcct gacgtggctg aaaaccaaac gtcggctgga ttagggagaa
    15121 gagcatgttt catcgcttat ggacgttaat ccgcaaagag ttgcagtcgc tgctgcgcga
    15181 accgcaaacc cgcgcgattc tgattttacc tgtgcttatt caggtgattc tgttcccgtt
    15241 cgccgccacg ctggaagtga ctaacgccac catcgccatc tacgatgaag ataacggcga
    15301 gcattcggtg gagctgaccc aacgttttgc ccgcgccagc gcctttactc atgtgctgct
    15361 gctgaaaagc ccacaggaga tccgcccaac catcgacaca caaaaggcgt tactcctggt
    15421 gcgtttcccg gctgacttct cgcgcaaact ggataccttc cagaccgcgc cgttgcagtt
    15481 gatcctcgac gggcgtaact ccaacagtgc gcaaattgcc accaactacc tgcaacagat
    15541 cgtcaaaaat tatcagcagg aactgctgga aggaaaaccg aaacctaaca acagcgagct
    15601 ggtggtacgc aactggtata acccgaatct cgactacaaa tggtttgtgg tgccgtcact
    15661 gatcgccatg atcaccacta tcggcgtaat gatcgtcact tcactttccg tcgcccgcga
    15721 acgtgaacaa ggtacgctcg atcagctact ggtttcgccg ctcaccacct ggcagatctt
    15781 catcggcaaa gccgtaccgg cgttaattgt cgccaccttc caggccacca ttgtgctggc
    15841 gattggtatc tgggcgtatc aaatcccctt cgccggatcg ctggcgctgt tctactttac
    15901 gatggtgatt tacggtttat cgctggtggg attcggtctg ttgatttcat cactctgctc
    15961 gacacaacag caggcgttta tcggcgtgtt tgtctttatg atgcccgcca ttctcctttc
    16021 cggttacgtt tcgccggtgg aaaacatgcc agtatggctg caaaacctga cgtggattaa
    16081 ccctattcgc cactttacgg acattaccaa gcagatttat ttgaaggatg cgagtctgga
    16141 tattgtgtgg aatagtttgt ggccgctact ggtgataacg gccacgacag ggtcagcggc
    16201 gtacgcgatg tttagacgta aggtgatgta acttcttatc tttcgccagc aaagacacta
    16261 ccgccgggcc ggcaaggatt gccagccctg caattgccag caaaaagttg ttttccagta
    16321 cgcgggacaa cagccacagc acaatcagcg ctgcgccaaa ataccaggtc gtggtcagct
    16381 cttccaacac gtctgccacc tcacgccagc gttgctcggg gtggcgctga aacaccaaca
    16441 tcatcactac cgtgacacaa tacagtgcgc ataatcccac gccgacgtga accagagtct
    16501 tactcatcca gcccaccacc agcagcgcca ctaccagtaa atgcaacata atctgccagc
    16561 aacttagacc cgttgcgaca cgaacacgtt gttgccactt catggcttct ctcctgaaga
    16621 atttatctct acttactcag agtaccgaac tttacggaaa attccgtaag accgcacctt
    16681 tttttgacgc cgactacact atttcaatga gataagaggc aaagacagga aaattatgcc
    16741 cgatcaaaca caacaatttt cgttcaaggt gctcaccatc aacattcaaa aaggttttac
    16801 cgcgtttaac cgacgcttca ttttgccgga acttcgcgac gcggtgcgta ccgtcagcgc
    16861 cgatattgtt tgcctgcagg aagtgatggg cgcgcacgaa attcatccgc tgcatgtgga
    16921 aaactggccc gatacctcgc actacgagtt tctcgccgac actatgtgga gcgattttgc
    16981 ctacggtcgc aatgccgtat acccggaagg gcatcacggc aacgccgtac tgtcgcgtta
    17041 tcccattgaa cattatgaga atcgcgatgt ttcggtcgat ggtgcggaaa agcgcggcgt
    17101 gctctactgc cgcattgtgc cgccgatgac cggaaaagcg attcatgtga tgtgcgtaca
    17161 tctgggcctg cgtgaggcgc accgtcaggc gcagcttgcg atggggtgaa tgagctaccg
    17221 gacggcgaac cggtattggt ggcgggtgat ttcaatgact ggcggcaaaa agctaatcat
    17281 ccgttaaaag tgcaggccgg actggatgag atttttaccc gcgcccacgg acgcccggcg
    17341 cgcacgtttc cggtgcaatt tcctctacta cgactggaca ggatctacgt caaaaatgcc
    17401 agcgccagcg cgccaaccgc gttgccgctg cggacatggc gacacctttc tgatcatgcc
    17461 cctttaagtg cggagattca tttatgaaat gtagctggcg cgaaggcaat aagatccagt
    17521 tgctggaaaa cggcgagcaa tattatcccg cggtgtttaa ggcgattggc gaggcacaag
    17581 aacgcatcat tcttgaaacg tttatctggt ttgaggataa cgtcggcaaa cagctgcatg
    17641 cggcactact ggcagcagcg caacgcgggg ttaaagcgga agtcttgctg gatggctacg
    17701 gttcgccgga tctcagcgat gagtttgtca ataaactgac ggcagctggc gtagtgttcc
    17761 gctactacga tccccgccct cgcctttttg gtatgcgcac caatgtgttt cgccggatgc
    17821 atcgcaaaat tgtggtgatc gacgcgcgta tcgcctttat tggcgggctg aattactccg
    17881 ccgagcatat gtccagctac ggtccagagg ctaaacagga ttacgcggta cgccttgaag
    17941 ggccgattgt cgaagatatt ctccagtttg agctggaaaa cctgcctgga cagagcgcgg
    18001 cacggcgctg gtggcgacgt catcacaaag cggaagagaa ccgccagccg ggagaagcgc
    18061 aggtattgct ggtctggcgc gataacgaag aacatcgcga tgatattgaa cgccattatc
    18121 tgaaaatgct cactcaggcg cggcgggaag tgattatcgc caacgcctac ttcttccccg
    18181 gctatcgatt tttacacgcc ttgcgtaaag cggcacggcg cggggtgcgg atcaaactga
    18241 tcattcaggg cgaaccggat atgccgattg tcagagtcgg tgcgcgcttg ctgtataact
    18301 atctggttaa aggcggcgtt caggtttttg agtaccgccg ccgcccgctc cacggcaaag
    18361 tggcattgat ggacgatcac tgggcgacag tagggtccag taatctcgat ccgctcagtt
    18421 tgtcactgaa tctcgaagca aatgtcatca tccacgatcg tcattttaac cagacgctgc
    18481 gcgataatct gaacggcatt attgccgcag attgtcagca ggtggatgaa accatgctgc
    18541 ccaaacgcac ctggtggaac ctgaccaaaa gcgtgctggc gttccacttt ttacgccact
    18601 tcccggcgct ggttggctgg catccggcac acacaccacg tctgacgcag gttgatcccc
    18661 ccgcacaacc gacaatggaa acgcaggatc gggtagaaac tgaaaacacg ggggtaaaac
    18721 cctgatgagt aaatcacacc cgcgctagcg cttagcaaag aagatcctca cctggctgtt
    18781 ttttatcgcg gtgattgtgt tgctggtggt ctacgccaaa aaagtggact gggaagaggt
    18841 ctggaaggtc atccgcgact acaatcgcgt tgcgctgctt agtgcggtcg ggctggtggt
    18901 cgtcagctat ctgatttacg gctgctatga cctgctcgcc cgcttttact gcggtcacaa
    18961 actggcgaag cgccaggtga tgctggtgtc gtttatctgc tacgccttca acctgacgct
    19021 cagtacctgg gtcggcggca ttggtatgcg ctatcgtttg tactcccgac tagggttacc
    19081 gggcagcact attacgcgga ttttctcgct cagtattacc accaactggc tgggctatat
    19141 tttactggca gggattatct ttaccgcagg cgtggtggtg ttgccggatc actggtatgt
    19201 cgctcaaact acgctgcgta ttctcggcat tggcttactg atgattatcg cggtttattt
    19261 gtggttttgc gctttcgcga agcaccgcca tatgaccatc aaagggcaaa agctggtgct
    19321 gccttcatgg aaattcgccc tcactcagat gctgatttcc agcgttaact ggatggtaat
    19381 gggggcgatt atctggctgt tacttggtca aagcgtgaac tatttctttg tactgggcgt
    19441 gttactggtt agtagtattg ctggcgtcat cgtgcatatt ccggcgggga tcggtgtgct
    19501 ggaagcggtg tttatcgcac tactggctgg ggagcatacc tcgaaaggga gcattatcgc
    19561 cgcgctgctc gcttatcgcg tcctgtatta ctttatcccg ctgctgctgg cgctgatctg
    19621 ttacctgcta ctggaaagcc aggcgaagaa gctacgggcg aaaaatgaag cggcgatgtg
    19681 aaatttagtt aagttcttta gtatctgcat tcacgactaa tgaaaaaaac gcgtatgcct
    19741 ttgccagaca agcgttatag ctatcgcggc aagtatccca aagaagccga taaaatagta
    19801 atagagtgtc aatgcacctg taaaagcgca acgaaccgga ctccacaact cttcactatg
    19861 gcattttcct gccagttcaa ggagcttatt tcgtccatgc gagataatgc ctggccataa
    19921 cacaatcact aagcaactta ttacccaaat gggccgttca ctcattaatg ccgcattcac
    19981 gatgattacc agggccaacc ctgtcaacgt catcataatg ataaaacggt gagaaccagg
    20041 atcaacatta aataataaac cggccagcat actgattaaa aacatcgcgc ccgcagtgct
    20101 gaacacaatg ataatggcat atacaggaac taaacttgca acgacaatcg ccaccaaaga
    20161 gagtaaaaac agatatatta cgcctgcgat gacggcattt atcttgttga tatccttact
    20221 taagccatac atacaaacta ataataaccc tatggcgaca tacattgttg gtgaatcata
    20281 tttggttgcc gtaatttcga gatacttagc tccccaggcc agtcctgcgg ttgccaccaa
    20341 acctaaagcg gtaatgagcc atataccgtt taatatcctg gtctcgtgct gaaaatctaa
    20401 tttattgctg ttttgtgagt atgattccat tcttttagtt gtccttagaa aaaatattaa
    20461 tattcaccat caataaattt aaacccacgc atacaaaata cttttgtatt tatggatacg
    20521 gaaaacgctt ccgctcggcc ataaggcgta ttttatacct ggtacttgtt aagtgtcgtt
    20581 tttagtaaga aaagaaatcc cgacacatgg ccgggatatt gatggtgaaa aagaattaac
    20641 ggcggttgcc aaaaattcgc agcaacatca ggaacaggtt gatgaagtcc agatacaagg
    20701 ttaacgcgcc aagaatggaa tatttgcgca ggttcgacgt gtcgcgggta tcaatctgct
    20761 cacccatatt tttcaatttc tgagtgtcat acgccgtcaa tccgacaaag acaatcacgc
    20821 cgatgtaggt aactgcccac atcaatgctt cgcttttcag ccagaagttg accagcgatg
    20881 ccagcacaat gccgattaac gccataaaca gcatattgcc aaagccactt aaatcgcgct
    20941 tcgtggtgta accgtacagg ctcattgcgc cgaacatccc ggcagtaacg acgaaagtac
    21001 tggcgataga agcagcggta tagacaatga atatactgga aagcgtaaga cccgtcagcg
    21061 ccgaataaag cataaagagc atcgtcgtta cacctgcgct cagcttttga atcatcgctg
    21121 ataacacaat aaccaatgct aattgcgcga tgatcagacc gattaaaaag acacggttag
    21181 tgaacaacag ctccatcacg gccgcggaat tagccgcata ccaggcaaca aatgcggtca
    21241 gcaacaagcc aacggtcatc cagccataga cttgcgccat ataagtttgc aagccagccc
    21301 ggggttgtac gattgaatca gaacgtggga atctgtccat gacgatctcc tgaagatata
    21361 aggaatatct taaggatact gcaaaatgat gaggctgtgc atcgacgcag cgtaaacgca
    21421 tgtactgagc ggtgaaattg ccggacgcag cggtgcctta tccggctaac aaaaaactac
    21481 cagcgttttg ccgcctgctg atcgctctcc cgagcttcaa cccagcggtc gccttccggc
    21541 gtggcttcgc gcttccagaa cggtgcgcgg gttttgagat aatccataat aaactgcccg
    21601 gcttcaaacg cactgctgcg atgcgcactg gtgacaccgg caaaaacgat ttcatcgccc
    21661 ggccataatt ccccgatgcg gtgaatcaca gtgacgcgcc ccagcggcca gcggttacgc
    21721 gcttcatcaa caatttctgc cagtgctttt tcagtcattc ccggatagtg ttcgagggtt
    21781 aatgctttga cgctgtcgcc caggttatgg ttgcgcacct taccagtaaa ggtgactacc
    21841 gcaccgtctt cgtcacgctc cgccagccac gggtactctt ctcctacgct gaacggctgc
    21901 ggaccaacaa caattttggt ttctgccatc ttaacctccg gttaccggcg ggaagaaagc
    21961 tacttcgtcg ccgtcagtca gcggatggtc aaaactcacc agcgtctggt tgacggcagc
    22021 cagtaatttg ccatcttcca gcgccagcgc ccagcgatcg ctctgcgcag ccatgtgctg
    22081 gcgtaacgct tcaacagttg ggaaatccgc agccacttcg gttgcatctg ttcccaccaa
    22141 ctcgcgcacc tgcgcgaaaa aaagaacttt aatcatccgc ttccacctta aagtcacccg
    22201 acttgccgcc gctcttcgcc agcaaacgta ccggaccaat caccatatct ttttgcaccg
    22261 ctttgcacat gtcataaatg gtcagcgccg ccacggaggc cgcggttaat gcttccattt
    22321 cgacaccggt tttcccggtc aggcggcata aggtttctat acgcacccga ttgtgctccg
    22381 gctcggcctg taaattgact tcaactttgc tgagcatcag cggatgacag agcgggatca
    22441 gatcccaggt gcgttttgcc gcctgaatac cggcaatacg cgcagtggca aatacgtcgc
    22501 ctttgtggtg gcgaccatca ataatcatcg ccagcgtctc gctgcgcatg gtgacaaagg
    22561 cttccgcccg cgcttcacgc acggtttccg ctttggcgga gacatccacc atgtgcgctt
    22621 cgccagcggc gttgatatgg gtcagttgcg acatacttat ttcttcaaat gtggatggaa
    22681 attacacgga cgcgtacggg catccagctg cggcgcgatg atattttccc atgcggtacg
    22741 gcacgctttg gtcgaacccg gcatggcgaa aatcagcgtt ttgttggcga cgcccgcaac
    22801 cgcacgagat tgcaacgtgg aagtgccaat ctcttcaaac gacaacatcc ggaacacttc
    22861 accaaaacct tcaacttcac ggtcgaacaa cggcagcaat gcttcgggag cctgatcacc
    22921 ttccgtcagg ccagtaccac ccgtaatcaa taccacttgt acatcgtcgc tggcgatcca
    22981 cgcagatacc tgagcgcgaa tagcgtagcg gttttctttc acaatggctt tatcgacaac
    23041 gtgatggccc gcttcttgcg ccgaatcgcg cagatagtga ccggaggtat cgtcttcttc
    23101 accgcgacga ttagaaaccg taagaatagc aatacgggtc gggataaatt cagtgcttac
    23161 ctgactcatc tgatctctcc ttttgacgtt ttagccgcca atgtacgata agttttgcgt
    23221 aataccggtg ttgttttgat gcaggaaatg ggtctgtttc ttctcccgca gcgccgctga
    23281 aatacgcgct tccagcgcct gttgctgggt atcgtcttcc agcagatcgc gcaggttaac
    23341 gccgccttca ccaaacaggc agagatggag tttaccaatg gaggaaacgc gcaggcggtt
    23401 gcaagtggcg cagaagtctt tttcatacgg catgataagg ccaatctctc cggcgtaatc
    23461 tggatggcaa aagacttgcg cgggaccgtc gctgcgttga cgtaattggt ggatccagcc
    23521 gcgacgcagt agctcgtcac gcagaacctg accagagatg tgatgcttac ggaagagctc
    23581 gctgccctcg cccgtttcca tcagttcgat gaaacgcagc tggatagggc gatgctggat
    23641 ccagttcaga aaggtgtcga gctggtgatg attaacatca cgcatcagca cggtattgac
    23701 tttgaccttc tcaaaaccgg cctcaaatgc agcatcaatc cctgccatga cctggttgaa
    23761 tttatcctgc ccggtaatag cgtgaaactg gcgggcgtcc agactgtcga cactgacgtt
    23821 aatgccagta agtcccgcat cgcgccagtt cgccacatcg cgttccagac ggtaaccatt
    23881 ggtggtgacc gcaatctggc ggatagcgtc gttttcccgc acagcggcga tgatatcggt
    23941 aaagtcgcgg cgtaaagacg gctcacctcc tgtcaggcgc actttttcgg tgcccagact
    24001 ggcgaaggcg cgcgtaaccc ggcgaatttc atcgacggta agaaagcctt tattggtgac
    24061 gccgctcggt ttgtagccat ccggcaggca gtaggtgcaa cgaaagttac acacatcggt
    24121 aatcgacagg cgcaagtagt aaaacttacg cgcaaatgca tcagtcagtt gtgaagccat
    24181 gtacaccttt ccagatacgg gaggcgaagt catttcttcc ttcgccctgg tggcaatctt
    24241 tacgagcatt gtcacggcca aagcaccgta tcagttgacc caggtgcaga ggctagagtg
    24301 tttagtggtt aagccgatac tagcgtgtaa atgagatttt taccatccac actttcgcta
    24361 tgcaatcatg tatatagcgt catgatcgtg ctatttcgct acagaataag ggaaaatggc
    24421 agttttactt tgatatacat catcagggag gcatagcgtg catcgtcctt tagaggtaga
    24481 agaaaatagt ttgtatcctc aatattggca ggttaattgc tgtttccccg caatttgcgc
    24541 tactgtagcg cggataatct gactccagga aactatatgc gcaatcgtac gctggctgat
    24601 cttgatcgtg tcgttgctct cggcggaggg catggactgg gacgcgttct ctcatcactt
    24661 tcgtctttgg gttctcgttt aacgggtatc gtcaccacca cggataatgg tggctcgacg
    24721 gggcgtattc gccgttcaga aggcggcatt gcctggggcg atatgcgcaa ctgcctcaac
    24781 caactgataa cggaaccgag cgtcgcctcc gcgatgtttg aataccgttt tggcggcaat
    24841 ggcgaacttt ccgggcacaa ccttggaaac ttgatgttaa aggcgctgga tcaccttagc
    24901 gtgcggcctc tggaagccat caatttaatt cgtaatctgc tgaaagtgga tacgcatttg
    24961 attccaatgt cagagcatcc cgtcgatctg atggcgattg acgatcaggg gcatgaagtt
    25021 tacggcgagg tcaatatcga ccagttaact acgccgattc aagagttatt attaacgccg
    25081 aatgtacccg caacgcgtga ggcagttcac gctatcaatg aagcggatct catcattatt
    25141 gggcctggca gtttttatac cagcctgatg ccaattctgc tgctgaagga aatcgcccag
    25201 gcattacgcc gcacgccagc gccgatggtt tatatcggca atctggggcg tgagttgagt
    25261 ttacctgcgg ctaatttgaa gctggaaagc aagctggcaa ttatggagca gtatgttggt
    25321 aaaaaagtca ttgatgcggt catcgtcggg ccaaaagtgg atgtctcggc ggtgaaagag
    25381 cggattgtga tccaggaggt actggaggcc agcgatattc cgtatcgtca tgaccgccag
    25441 ttgttacata acgcgctgga aaaggcgtta caggctttag gttaacggaa atccgaagga
    25501 aaattccggc ttcctattga agacaaagtg cgcgttgttt atgccggatg cggcgtgaac
    25561 gccttatccg gcctacaaac cgcgcaaatt caatatattg cggagaaaat gtaggcctga
    25621 taagcgtagc gcatcaggct gttttccgtt tgtcatcagt cttcttcgct atcctgttac
    25681 gatgcggcaa taaacaactc acgcaactga tgcaactggt cacgaatttg tgccgcttct
    25741 tcgaactcca gattctgcgc gtgttgcatc atcagccctt ccagttcatg gattttctgc
    25801 tgcaacgctt tcggcgacat atccatcggc acattatccg gctcaacaat cgggcgcgat
    25861 tttcctctgc ccttcgcttt ggttttggca atgttctgcc ccagcgccag gatatcgacc
    25921 actttcttgt tcaagccttg cggcgtaatg ccgtgttcct cgttgtactt ctgctgtttc
    25981 tcacggcgac gttcggtttc gccaatcgct ttcgccattg atggggtgat cttatcgccg
    26041 tagagaatcg ctttaccgtt aacgttacgt gccgcacgac caatggtctg gatcaacgaa
    26101 cgttcggaac gcaggaagcc ttctttgtca gcgtcgagga tcgccaccag cgacacttcc
    26161 ggcatatcca gaccttcgcg cagtaagttg atccctacca gcacgtcgaa ctcacccaga
    26221 cgcaagtcgc ggataatctc catacgttcg acggtgtcga tatctgagtg aagataacgc
    26281 acgcgctcgc catgttcttc gagatattcg gtaagatctt ccgccatccg cttggtcagt
    26341 gtggtgacca gtacgcgttc gttaattgcc gctcgctgac gaatctccga aagaagatca
    26401 tcaacctgtg tcgccaccgg ccgcacttcg ataatcgggt caagcaatcc ggttggacgc
    26461 accacctgat ccaccacatc gccgccggat ttttccagct cgtaattacc cggcgtcgcc
    26521 gaaacataga tggtttgcgg cgctaatgct tcgaactctt caaacttaag cggacggtta
    26581 tccagcgctg atggcaggcg gaagccgtac tccaccagtg tctctttacg cgcccggtca
    26641 ccgcgataca tgccgccaat ttgtggaatg gtgacgtgag attcatcgac gaccagcagc
    26701 ccatcggcag gcaggtaatc aaacagcgtc ggcggtggct cacccggtcc acgaccggag
    26761 aggaagcgcg agtagttttc aatccccgaa cagtagccca gctcgttcat catctccaga
    26821 tcaaactggg tacgctgggt cagccgctgc tcttccagca gtttgttgtt ttccaacagc
    26881 actttgcgtc tggcggccag ttcttctttg atctcctcca tcgcctgtac gatgcgctcg
    26941 cgcggtgtga cgtagtgcgt tttcgggtag atggtaaaac gtggaatagt ggaaacaatc
    27001 tgcccggtca gcgggtcaaa taacgacaat cgttccactt cctcgtcaaa cagttccacg
    27061 cgaagtgcaa tgtcatccga ttctgccggg aagatatcaa tcacctcgcc acgaacgcgg
    27121 aaagtaccac gctggaatgc ttgatcatta cgagcgtatt gcagctccgc cagtcggcgc
    27181 agaatcgcgc gctgatcgat aatcataccg accgtgagat ggagcatcat cttgagatat
    27241 aaatcaggat cgcccagacc ataaatcgcg gaaacagagg ccactacaac cacatcacgc
    27301 cgctccagca tcgctttggt ggcggataaa cgcatctgct caatatgttc gttaaccgag
    27361 gcatctttct caatgaaagt gtcggaactc ggtacatagg cttccggctg atagtagtcg
    27421 tagtaggaga cgaaatactc caccgcgttt tccgggaaga actctttcat ttcgccatac
    27481 agctgggccg ccagcgtttt gttgggcgca agtaccatgg ttgggcgctg aaggtcagca
    27541 atgacattgg caatggtgaa ggttttccct gagccagtca cgccaagtaa cgtctggtgc
    27601 gccaggccat cttccagccc ctcttcgaga cgtcgaatcg cctctggctg atcgccagaa
    27661 ggtttaaaag cggaattcag tttgaacggt ttactcatga gtcgctacct gaaggagttg
    27721 ggcgggcagg tatgtaattt tactcgtcgt acttaattat gccaacaaat tatactggat
    27781 aaaaaaacag ttcatcacca taatatttct gatacagcgt aaactccgct gtcaatcatg
    27841 agcaaaattt actctgtggc gagataaaac tccggcctta ccgggttatc cccaaagcaa
    27901 cggctttttt aacatttgtc aagatgagtg atgacagttt tatggcaaga gatgcctgtt
    27961 cagtgactgc cattgcattt atctaaccag ttaaaaaata aaagatattt ctttgagccg
    28021 tctttaacgc caattcgcgt gcaagccgcg tattctctcg cttgcctcgt gttttctaac
    28081 tctaatacac atggttatcc acaggaatag tggataactg tctccagccc ctatcccccg
    28141 ccgcctgggc aattcccaca ttcgccgcat gaggcggaag taaaattttt ttcgtgatta
    28201 ttttagaatt taattggtta aattgcagtc aatcgaagac gcgatctcgc tcgcaattta
    28261 accaaataca gaatggctac aacaaggcaa ggtttatgta ctttccggtt gccgcatttt
    28321 ctggattttc tgcaagccag gggatctctc ccagcagcgg cgcgggaatc atgcgggtga
    28381 gcgtggtcat atattcagcg tgacgttttc ccggaggcgt aacatcgttc gccacccaac
    28441 ccgccagagt cagtccggcg tgttgtattg cctgcgcagt caacatcgcg tgattaatac
    28501 agccgagttt cacaccaact accagtatca ccggcagttg ttcctgtgtt acccaatctg
    28561 caaaagtgaa agtgtcagaa agcggcgtaa accagccgcc agcaccttcc actaacaccc
    28621 agtcagcctg ttgttcaagc gcgcgtaatc cggcgctcat taccaatgat tctatcggcc
    28681 tgccctcttg cgcgctgatg atgtgcggcg aagtgggttc tgcgaaggtg taaggattta
    28741 ctgttgcgta atccagctgc aggctgctgt tgtgctgtaa cgccagcgcg tcactattac
    28801 gtaagccttc cggggtcttt tcgctgccag aggcgaccgg tttataacct gccgtccgat
    28861 aacctactgc cttcgcggct tgtaaaagtg cacaactggc gacggttttc cccacttcgg
    28921 tatccgttcc ggtgacaaaa taacgtttac tcacgagcaa tcactcccaa aaaaagatga
    28981 tacgtcagag gatatcgccc ctgttgttgc ggccaggcca gttgcaatcg ctgcaattgc
    29041 gaacgcgtta atattcgcgg gtcgcgccct tcatgaagat gcgtagcacc gatgcctttc
    29101 agcgaacgca tggcactgag cgcatcatca aaccatagtg tgatgggctg aatatgatgt
    29161 tgataatgca cgccgttcag cgactgttcg atttcatctg gcggtaaaaa gcgattagca
    29221 tgcggacgct cgtccaccgc ctgccacgcc tgatgcagtt cgggtaacga tccctgcacc
    29281 agcgtggtaa acgccaccac gcctccgggg cgcaccaccc gatacagctc gcggagtgcc
    29341 gtggataaat taccgcacca ctgcaccgcg agattgctcc atgcaagatc gaacgtcgca
    29401 gtcgctaacg gcagggattc gatatctccc gccagataat ggtctgcagc atctttctgg
    29461 cgggcttgca caagcattgg cggtgagaga tctaacgccg tcacctgtgc gtgacgctct
    29521 cgccagtggc ggctcatcca gcctggccca caccccgcgt ccagtacgtg ggtgtattta
    29581 cgctgtggga gcattgccag taagacgtca gcactccggc gctgtaactc tgcgtgttgc
    29641 tcatagtgcg cggctgcccg accaaatgcc gctgcaatgg cttgtttatt aaccgttgcc
    29701 atgcagcacc tccagcagac ggtcgatatc ctgcatttca tgcgctgcgg ttagcgttaa
    29761 gcgcagtcgc gcagtaccag cgggtacggt tggcgggcga atcgccgtga cccagcagcc
    29821 ttgctggcgc agtttttctg ccagttgtaa cgcacggctg ttatcaccga cgatcaatgg
    29881 ctggatggcg ctgcatgaat cagcaagcgt aaacggcaaa tcctgtactc cggcacgaaa
    29941 acgcgcaatg agtgacacca gtttttcgcg ccgtgcatcc ccctcatcac ggcgaatgac
    30001 cgccagcgac gcacgtaatg cctgcgcctg agcgggcggc atactggtgt tgtagataag
    30061 gtggcgggcg aattgcagca gataatccgc caccgtactg gagcaaagca ccgctgcccc
    30121 gctgacgcca aatcctttgc caaaagtcac caccagcaat tctggtttta ccttttgcag
    30181 ccagcagctg ccgcgcccct gctccccgat aacgcccgtg ccgtgggcat catcgaccat
    30241 caaccagcca ttgtgctgtt gcgttacctg ctggatttcc gccagtggcg cactatcgcc
    30301 gtccatgctg aacacgcctt ctgtcaccac cagttgctgc cccggacagg gggaagcaag
    30361 cagtcgcgcc agatgagtga catcgttatg aacaaaacgg cgaagctgcg acgggcttaa
    30421 actggcagcc tccagcaatg aggcatggct aagccggtca gcgacaatgc ggtcctcttt
    30481 tgccatcatc gcggcaatga ccgcctgatt agcggcaaaa ccagagataa atagcagtgc
    30541 ccgcgaatag cccagccact cggccagttc ttcttccagc gcctgatgcg caacgctata
    30601 accgctgacg tgaccggaac cgccgctacc gacgccaaat tgctccgcac cctgctgcca
    30661 ggcacggata atttgcggat gatggcttaa acctaaataa tcgttactgg aaaagttcag
    30721 atactggcga tcatccgcca ccagccagcg tccggctcct tgcgccactg gataacggcg
    30781 acgcagggca tcggcagcac gccgcgcatc gagcgccgcg ttgattttct cctgccagct
    30841 catagtgctg ccgcgttgta atattcgtca gtatccgggg tcatcagcgc ctgttcaaga
    30901 cgttgctgtt gttcgttatc ccctgccagc acggcagttt gctgcggatt tagccccagt
    30961 ttgcggaaca gttgcaggtc tttatcttct tccggattcg gcgtggtcag cagtttgcaa
    31021 ccgtagaaaa tcgagtttgc gcctgccata aagcacatcg cctgagtctg ttcgttcatc
    31081 tgctcgcgtc cggcagaaag gcgcacgtaa gaggtcggca tcatgatccg cgcgaccgca
    31141 atggtgcgaa taaaatcaaa ggcatcaacg tcatcgttat cggcaagcgg cgtgcctttc
    31201 accttcacca gcatgttgat tggcacgctt tccggcggcg tcggcaggtt tgccagttgc
    31261 agcaataatc cggcgcgatc ttttaccgtt tcgcctaagc ccacaatgcc gccagaacag
    31321 actttgatcc cggcatcgcg cactttttcc agcgtatcga ggcgttcctg ataagtgcgg
    31381 gtggtgatga tattgccgta aaactccggc gaggtgtcga ggttgtggtt gtagtaatcc
    31441 agcccggcgt tcgcgaggcg ctgcgcctga gattcactca acgtgcccag cgtcatacac
    31501 gcctccagcc ctaaatcttt taccccctgc accatctgct ccaggtacgg catatcgcgt
    31561 tcgttgggat tcttccacgc cgcgcccatg caaaaacgcg tcgatcccgc cgctttcgct
    31621 ttgcgcgccg actccagcac ctgttcaact tccatcaacc gctcggcttc cagaccggtt
    31681 ttatagcgcg agctttgcgg gcaatatttg caatcttccg ggcaagcacc ggttttaatc
    31741 gacagcaacg tgctgacctg cacctgacga ggatcgaaat gctggcgatg cacctgctgc
    31801 gcttcaaaca gcagatccag caacggtttt tcaaataatt ctgcgacttg cgacaatgtc
    31861 cagcgtgggc ggtgagccat ggggcttctc caaaacgtgt tttttgttgt taattcggtg
    31921 tagacttgta aacctaaatc ttttcaattt ggtttacaag tcgattatga caaaggacga
    31981 tcttgccttt gaccaacgcc atatctggca cccatacaca tccatgacct ccccgctgcc
    32041 ggtttatccg gtggtgagcg ccgaaggttg cgagctgatt ttgtctgacg gcagacgcct
    32101 gattgacggt atgtcgtcct ggtgggcggc gatccacggc tacaatcacc cgcagcttaa
    32161 tgcggcgatg aagtcgcaaa ttgatgccat gtcgcatgtg atgtttggcg gtatcaccca
    32221 tgcgccagcc attgagctgt gccgcaaact ggtggcgatg acgccgcaac cactggaatg
    32281 cgtttttctc gcggactccg gttccgtagc ggtggaagtg gcgatgaaaa tggcgttgca
    32341 gtactggcaa gccaaaggcg aagtgcgcca gcgttttctg accttccgca atggttatca
    32401 tggcgatacc tttggcgcga tgtcggtgtg cgatccggac aactcaatgc acaacctgtg
    32461 gaaaggctat ctgccagaaa acctgtttgc tcccgccccg caaagccgca tggatggtga
    32521 atgggatgaa cgcgatatgg ttggctttgc ccgcctgatg gcggcgcatc gtcatgaaat
    32581 cgcggcggtg atcattgaac cgattgtcca gggcgcaggc gggatgcgca tgtaccatcc
    32641 ggaatggtta aaacgaatcc gcaaaatgtg cgatcgcgaa ggtatcttgc tgattgccga
    32701 cgagatcgcc accggatttg gtcgtaccgg caaactgttt gcctgtgaat atgcagaaat
    32761 cgcgccggac attttgtgcc tcggtaaagc cttaaccggc ggcacaatga ccctttccgc
    32821 cacactcacc acgcgcgagg ttgcagaaac catcagtaac ggcgaagccg gctgctttat
    32881 gcacgggcca acttttatgg gcaatccgct ggcctgcgcg gctgcaaacg ccagcctggc
    32941 gattctcgaa tctggcgact ggcagcaaca ggtggcggct attgaagtac agctgcgcga
    33001 gcaacttgcc cccgcccgtg atgccgaaat ggttgccgat gtgcgcgtgc tgggggcaat
    33061 cggcgtagtc gaaacaactc gtccggtgaa tatggcggcg ctgcaaaaat tctttgtcga
    33121 acagggggta tggatccggc cttttggcaa actgatttac ctgatgccgc cctatattat
    33181 tctcccgcaa cagttgcagc gtctgaccgc agcggttaac cgtgcggtgc aggatgaaac
    33241 atttttttgc caataacggg aagtcagcgt gtgggtttct ggctacactt tctgcaaact
    33301 agaaaggagg gttcatgaaa ctcatcagta atgatctgcg cgatggcgat aagctgccgc
    33361 atcgtcatgt ctttaacggc atgggttacg atggcgataa tatttcaccg catctggcgt
    33421 gggatgatgt tcctgcggga acgaaaagtt ttgttgtcac ctgctacgac ccggatgcgc
    33481 caaccggctc cggctggtgg cactgggtag ttgttaattt acccgctgat acccgcgtat
    33541 taccgcaagg gtttggctct ggtctggtag caatgccaga cggcgttttg cagacgcgta
    33601 ccgattttgg taaaaccgga tacgatggcg cagcgccgcc gaaaggcgaa acccatcgct
    33661 acatttttac cgttcacgcg ctggatgtag agcatattga tgtcgatgaa ggagccagcg
    33721 gcgcgatggt cgggtttaac gttcatttcc actctctggc aagcgcatcg attaccgcga
    33781 tgtttagtta atcactctgc cagatggcgc aatgctatct ggtatcactt aaaggtatta
    33841 aaaacaactt tttgtctttt taccttcccg tttcgctcaa gttagtataa aaaagcaggc
    33901 ttcaacggat tcatttttct atttcatagc ccggagcaac ctgtgaacac attttcagtt
    33961 tcccgtctgg cgctggcatt ggcttttagc gtgacgctga ccgcctgtag ctcaacacca
    34021 cccgatcaac gtccttctga tcaaactgcg cctggtacct cttctcgccc gattctgtcg
    34081 gcaaaagaag cgcagaattt cgatgctcaa cactattttg catccctgac accaggtgct
    34141 gcagcgtgga atccttcccc gattaccctg cctgcgcaac ctgactttgt tgtcggcccg
    34201 gcgggcactc aaggtgtaac gcataccacg attcaggcgg cggtagatgc ggcaattatc
    34261 aagcgtacca acaagcgcca gtatattgcc gtgatgcctg gtgagtatca gggaacggtg
    34321 tatgtccctg ctgctccggg tggaattact ctgtacggta caggtgaaaa accgattgat
    34381 gtgaagattg ggctttccct tgatgggggc atgagccctg ccgactggcg tcacgacgtc
    34441 aacccgcgcg gcaaatatat gccaggtaaa ccagcgtggt atatgtacga tagctgccag
    34501 agcaaacgca gcgacagtat cggtgttctc tgctctgcgg tcttctggtc acaaaacaat
    34561 ggcctgcaac tgcaaaacct gaccatcgaa aacacgctgg gcgatagcgt agatgcaggt
    34621 aaccatccgg cggtggcact gcgtactgat ggtgaccagg tacagattaa caacgttaac
    34681 attctcggtc gtcagaacac cttctttgtc accaacagcg gtgtgcagaa ccgtctggaa
    34741 acgaatcgtc agccgcgtac gctggtgacc aacagctaca ttgaagggga tgtggatatc
    34801 gtttctggtc gcggcgcagt ggtgttcgat aacaccgaat tccgcgtggt gaactcacgt
    34861 actcagcaag aagcgtatgt gtttgcaccg gctacgctgt ccaacattta ctacggtttc
    34921 ctcgccgtaa acagccgttt caatgctttc ggtgatggtg tggcgcaact gggccgctcg
    34981 ctggatgttg atgccaatac caacggtcag gtggtgatcc gtgatagcgc catcaacgaa
    35041 ggttttaaca cggctaaacc gtgggccgat gcggtgatct ctaatcgtcc gtttgcgggt
    35101 aataccggca gcgtagatga taacgacgaa atacagcgca atctgaatga cactaactac
    35161 aaccgcatgt gggaatacaa taaccgcggc gtgggtagta aagtggttgc agaggcgaag
    35221 aagtaagagc aattaactat ttgccggatg cggcgtaaac gccttatccg gcctacggtt
    35281 cgatgcgatt tgtaggtcgg ataagatgcg caagcatcgc atccgacaat aagtgccgaa
    35341 tgcgacctac attcacatgg cgctttttac atctgacggt ttttattgaa gttaatcaaa
    35401 ctacccgcct tgataatctc gcgctcttca gcagtcagac tttccatata gagcgtaatt
    35461 tccgttaccg gcgcatcttc atggatcaca taacctttaa acgtcgtacc cggattatcc
    35521 agcgccgctt taatgccagg gatgtaaatg taatccccca cttcaaaggt tggcacttcc
    35581 gccatctgca gcggtaacat cccccagttg atgacgttag aacggtagcg tttagtcgcg
    35641 tactcttcgg caatattcgc cagaccgcca atcacacgct ggcagctcgc cgcctgttca
    35701 cgcgcagaac catcgcctgg tttcaccgca tataccatgc tgccaatttc agtttgcagc
    35761 ggatcaatat gctcctgacc agcaatctgc ttaatgcgcg caaacacctc tgtcagctcg
    35821 ctgacattcc ccgccagacg ctgattttcc agctcagccg tcgctttact tctgccaaca
    35881 taaccgggat cgcggcgtga cagggtaaac tccgccagac caatcggatt tgaacgataa
    35941 gaagaggttt caccggaagg aatcagttcg tcggtggtgg tcacttcgtc gaggatcttc
    36001 gagcacactt tcaggacgat attgtcagtc agcgcaccca attccggcca gtctttaatg
    36061 ttcggtccgt aaatcagcgg ttgctgagtt gcccctttca caaagccctg ataaacacgg
    36121 tttttatacg gcgttacatc gaaggcgtac tccggcacgt tgtcccagca atcaagttcg
    36181 ctggcagagg ttaaatagcc accgtttgcc gcagtcgcag cgatagaacg agcgtccatc
    36241 aacgccaccg ctgacatctg cccattagct ggcttagagc cttcgcggtt cgggaagtta
    36301 cgcgtggtgt ggcgaatact taatccgttg ttgattggcg tatcgcccgc gccaaagcat
    36361 gggccgcaga acgcggttct gatgattgcg cctgcgccaa tcaaatctgc taccacacct
    36421 tttttggcta aatccataaa caccggctgt gatgacgggt aaaccgccag cgagaaggtg
    36481 tcattgccac aggattgacc gcgcagtgca ttcgccgccg cgatgacgtt ttcgtagtta
    36541 ccgccagaac agcccgcgat aatcccctgc tgcactttca ggcgaccatt ttccacttta
    36601 tccagcagcg agagtttggc tttaccgtgc gccacgcgtt cggactcaat ttcaatctca
    36661 cgcagaatgt cggtcaggtt ctggttcagt gtgtcgattt catacacgtt gctcgggtgg
    36721 aacggcagcg caatcattgg tttgatggcg cttaaatcaa cgctgatgca gccatcgtag
    36781 tacgccatcg gttgagggtt aagctggcag taatcctggc cgcgaccgtg cagcgccagc
    36841 cagttatgca cttcttcatc agtttgccag acggagctta aacaggtggt ttccgtggtc
    36901 atcacgtcaa cgctgttacg gaaatcggta gagagcgcgc taacgcccgg tccaacgaac
    36961 tccatgactt tgtttttgac gtaaccgttt ttgaacaccg cgccaatgat agccagcgcc
    37021 acatcctgtg gccccacata cggcgcaggt tttccggtca gatgcaccgc aaccacgccc
    37081 ggatagtcga tatcccaggt gtcattaagc agctgtttta ccaactcacc gccgccctca
    37141 ccgactgcca ttgtccctaa tgcaccgtaa cgggtgtggc tgtctgaccc gaggatcatt
    37201 ttgcccccgc ctgccatcat ctcacgcata tattgatgga tgatcgcaat atgcggaggc
    37261 acaaaaatac cgccataacg ctgagctgcc gataaaccaa aaacatggtc atcaccgtta
    37321 atggtgccgc cgacggcgca gagtgagtta tggcagttgg tcagcacata cggcagcggg
    37381 aaacgttcca ttccggacgc tttagcggtc tgtacaatac caacaaaggt aatatcgtga
    37441 gaggctaatg aatcaaactt aattttaagt ttatccatat ttccggacgt attatgagaa
    37501 gagagaatag accaggcaat agtgcctttt ttggcttctt cttttttaat ttcgccggtg
    37561 aaatgttctt cggcaattat ttcgttatta ctggcgagaa acacgccttt
//
LOCUS       DADKRT010000015        37224 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.015, whole genome shotgun sequence.
ACCESSION   DADKRT010000015 DADKRT010000000
VERSION     DADKRT010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 37224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37224
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.015"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..808)
                     /locus_tag="JQ356_000664"
     CDS             complement(<1..808)
                     /locus_tag="JQ356_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HAY4620847.1"
                     /translation="MTIEKSRFSSGAAPQPNVNTGVINGNDFAAIVPVIAGRIGGREA
                     NIVSAKALHKALGVGRDFTNWIKGRIDQYGFIAGTDFIRVENLSTPKRASAKTRQQIE
                     HDYLLSLDMAKEVAMVERNEQGRAIRRYFIQCEEELQRSVPEIAARYRRQLKARLSAA
                     NNFKPMCDALNMARAEMGKTTQQRHYSNESNMIARIVLGGMTAKQWAQANGITGEPRD
                     SMNAAQLEHLAYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEVNHA"
     gene            complement(822..1253)
                     /locus_tag="JQ356_000665"
     CDS             complement(822..1253)
                     /locus_tag="JQ356_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620848.1"
                     /translation="MEKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYML
                     RTGIEGWTENDILRYCRLSSGRNYASELERRLDIQLERIDEKNPDGIGSHLRYRFTGR
                     GDVLKVIRLVNHNADAGGYQGLSQPEIADILNLYPDNLTAA"
     gene            complement(1253..1456)
                     /locus_tag="JQ356_000666"
     CDS             complement(1253..1456)
                     /locus_tag="JQ356_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY4620849.1"
                     /translation="MNIDTIPTKGYIRRFRLAELLGVSVSTIDRKVRNGSLPRPVKLG
                     EKITAFDAVEIHNWLAERRGKVA"
     gene            complement(1569..2417)
                     /locus_tag="JQ356_000667"
     CDS             complement(1569..2417)
                     /locus_tag="JQ356_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620850.1"
                     /translation="MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGY
                     DGTLHSIASLYRNCSLFPDVKEDCLLLADIITEVEDEKSFKAGVVNHIDCHVLGLWHV
                     NASYILDIAGLDSIDTPARIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYIT
                     RPWVEYIGECMDKNQPIYSPETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYV
                     KRHYPEECKGKNGKETNEAWANATINHWALLGGGYDEPSIDYLKKLIADADRTPEERT
                     TAGKKR"
     gene            complement(2513..3772)
                     /locus_tag="JQ356_000668"
     CDS             complement(2513..3772)
                     /locus_tag="JQ356_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4620851.1"
                     /translation="MPKLTDMQIRAWIKSGERFEGRADGNGLYLRYREADKTPTWRFR
                     YKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGYDVAGEKQKRKTEALAKMEAE
                     KNAMRVSELAAEYFERQILPRWKHPDILRRRIDKDINPCIGSMKVEDVKPRHIDDMLK
                     GIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVADAGGKEAARDRWLTRD
                     ELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERS
                     KNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQNRMIPHIQESTLPVALAKVR
                     AEMPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKA
                     ALAQWADLLVALESGKDYNVTPLRRAN"
     gene            complement(3963..4826)
                     /locus_tag="JQ356_000669"
     CDS             complement(3963..4826)
                     /locus_tag="JQ356_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HAY4620852.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRSRLTRGKVECTLRYEPDISAQGELILNEKLAKQLVTAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            4953..5669
                     /gene="rph"
                     /locus_tag="JQ356_000670"
     CDS             4953..5669
                     /gene="rph"
                     /locus_tag="JQ356_000670"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HAY4620853.1"
                     /translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
                     AVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
                     ALARGGIESIVATQKAALAN"
     gene            5735..6376
                     /gene="pyrE"
                     /locus_tag="JQ356_000671"
     CDS             5735..6376
                     /gene="pyrE"
                     /locus_tag="JQ356_000671"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HAY4620854.1"
                     /translation="MKPYQRQFIEFALGKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGLEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEA
                     KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
                     RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV"
     gene            complement(6413..7009)
                     /gene="slmA"
                     /locus_tag="JQ356_000672"
     CDS             complement(6413..7009)
                     /gene="slmA"
                     /locus_tag="JQ356_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HAY4620855.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
                     QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(7116..7574)
                     /gene="dut"
                     /locus_tag="JQ356_000673"
     CDS             complement(7116..7574)
                     /gene="dut"
                     /locus_tag="JQ356_000673"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HAY4620856.1"
                     /translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
                     PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
                     NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
     gene            complement(7552..8772)
                     /gene="coaBC"
                     /locus_tag="JQ356_000674"
     CDS             complement(7552..8772)
                     /gene="coaBC"
                     /locus_tag="JQ356_000674"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HAY4620857.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEGLASRGLLIWGPDSGSQACGD
                     IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
                     VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNV
                     EEYARQKRIRKNLDLICANDVSQPTQGFNSENNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            8944..9612
                     /locus_tag="JQ356_000675"
     CDS             8944..9612
                     /locus_tag="JQ356_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HAY4620858.1"
                     /translation="MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTL
                     AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL
                     SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAI
                     KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE
                     RGWI"
     gene            9829..10065
                     /gene="rpmB"
                     /locus_tag="JQ356_000676"
     CDS             9829..10065
                     /gene="rpmB"
                     /locus_tag="JQ356_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HAY4620859.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRVIDKKGIDTVLAELRARSEKY"
     gene            10086..10253
                     /gene="rpmG"
                     /locus_tag="JQ356_000677"
     CDS             10086..10253
                     /gene="rpmG"
                     /locus_tag="JQ356_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HAY4620860.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            10351..11160
                     /gene="mutM"
                     /locus_tag="JQ356_000678"
     CDS             10351..11160
                     /gene="mutM"
                     /locus_tag="JQ356_000678"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HAY4620861.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
                     SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
     gene            complement(11199..11678)
                     /gene="coaD"
                     /locus_tag="JQ356_000679"
     CDS             complement(11199..11678)
                     /gene="coaD"
                     /locus_tag="JQ356_000679"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HAY4620862.1"
                     /translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
                     MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
                     AHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
     gene            complement(11686..12963)
                     /gene="waaA"
                     /locus_tag="JQ356_000680"
     CDS             complement(11686..12963)
                     /gene="waaA"
                     /locus_tag="JQ356_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HAY4620863.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
                     HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
                     AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQVLLQQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            13376..14434
                     /gene="rfaQ"
                     /locus_tag="JQ356_000681"
     CDS             13376..14434
                     /gene="rfaQ"
                     /locus_tag="JQ356_000681"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HAY4620864.1"
                     /translation="MDKLFRRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ
                     DTIPILSENPEINALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAI
                     LVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLRVDSLVKQT
                     TMSYPPASWKRMRRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEV
                     VLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHI
                     AAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSVIPAAD
                     VIAAVDKLLPSSTTGTSL"
     gene            14431..15555
                     /locus_tag="JQ356_000682"
     CDS             14431..15555
                     /locus_tag="JQ356_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HAY4620865.1"
                     /translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
                     YPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
                     ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAEPFRQETLNEILRKA
                     LTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG"
     gene            15548..16345
                     /gene="rfaP"
                     /locus_tag="JQ356_000683"
     CDS             15548..16345
                     /gene="rfaP"
                     /locus_tag="JQ356_000683"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HAY4620866.1"
                     /translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
                     KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWSAIHRLRDVGVDTMYGVAFGEKGI
                     NPLSRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
                     RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
                     TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
     gene            16361..17377
                     /gene="waaO"
                     /locus_tag="JQ356_000684"
                     /gene_synonym="rfaI"
     CDS             16361..17377
                     /gene="waaO"
                     /locus_tag="JQ356_000684"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HAY4620867.1"
                     /translation="MSAHYFNPQEMINKTIIFDERPAASVASSFHVAYGIDKNFLFGC
                     GVSITSVLLHNNDVSFVFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALP
                     TTKNWSIAMYFRFVIADYFIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTER
                     DANWWSLRGQSLQCNELEKGYFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRFTY
                     MDQDILNLILLGKVKFIDAKYNTQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYW
                     AGYPSAQPFIKAKEASPWKNEPLMRPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYL
                     KIIK"
     gene            17394..18389
                     /locus_tag="JQ356_000685"
     CDS             17394..18389
                     /locus_tag="JQ356_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase"
                     /protein_id="HAY4620868.1"
                     /translation="MNEFIKERFSYLADNKKENAPELNVSYGIDKNFLYGAGVSISSV
                     LINNSDINFVFHVFTDYVDDDYLKSFNETAKQFNTSIIVYLIDPKYFADLPTSQFWSY
                     ATYFRVLSFEYLSESISTLLYLDADVVCKGSLKPLTEIIFKDEFAAVIPDNDSTQAAC
                     AKRLNIPEMNGRYFNAGVIYVNLKKWHEANLTPYLLKLLRGETKYGSLKYLDQDALNI
                     AFNMNNIYLAKDFDTIYTLKNELYDRSHRKYQQTITDKTVLIHYTGITKPWHSWAGYP
                     SASYFNIAREQSPWKKYPLKEARTVAEMQKQYKHLFAHGEYIKGITSLIKYKLKK"
     gene            18399..19091
                     /gene="rfaY"
                     /locus_tag="JQ356_000686"
     CDS             18399..19091
                     /gene="rfaY"
                     /locus_tag="JQ356_000686"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HAY4620869.1"
                     /translation="MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVKVLCNIDD
                     TKVSLIDTKYGRYVFKVFAPKTKRNERFLKSFVKGDYYQNLIVETDRVRSAGLTFPND
                     FYFLAERKIFNYASVFIMLIEYVEGVELNDMPIIPENVKAEIKASMEKLHALNMLSGD
                     PHRGNFIVSKDGVRIIDLSGKSCTAERKARDRLAMERHLGIANEIKDYGYYSVIYRTK
                     LRKFIKKLKGKA"
     gene            19117..20142
                     /locus_tag="JQ356_000687"
     CDS             19117..20142
                     /locus_tag="JQ356_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactose--(galactosyl) LPS
                     alpha1,2-galactosyltransferase"
                     /protein_id="HAY4620870.1"
                     /translation="MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQS
                     VVMHNPDLAVKFHLFTDYIDEDYLQRVNAFTSKNANVEVIIYKVSNAFIDIFPSLKQW
                     SYATFFRLVAFQYLSETIENLLYIDADVICKGSLAGLLDINFDEDKFAAVIKDVPFMQ
                     EKPAKRLAIEGLPGNYFNAGVVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDI
                     LNILFFGHCNFISGDYDCFYGIDYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWT
                     NYPCQKYFNEAYQASCWNDVAFIPATNEKQYQVKYQHAKKNGDTFNAFIYFIKFKLNK
                     YKRKLFG"
     gene            20227..21210
                     /locus_tag="JQ356_000688"
     CDS             20227..21210
                     /locus_tag="JQ356_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HAY4620871.1"
                     /translation="MSNDYPLVSIIIPTYNSSDYITETLTKLEKQTYPNFEIVIVNDG
                     SKDNTSNVLREYGLTHSRLIIVNKENGGVSSARNTGIRKAQGQFICFMDDDDEIDPNY
                     LLKMYTRQHETGGDAIYCGLYGHYIKDGVTYSPINTEFNEGSLLFDFFYKKVRFHIGC
                     LFIRKQLLEENNLFFDEDLRLGEDLDFIYRLLITCDMYAVPYYMYKHNYRENSLMNSC
                     RTITHYRHESFAHERIYSSVMQLYKGNRKEEIHTLLSQNRAYHKTRYLWNVLLNGDFK
                     LLNQLVESNEKELRDCNLPGKRDKRRAKILASKNYILWRMVRLVNRKKNKR"
     gene            21256..22509
                     /locus_tag="JQ356_000689"
     CDS             21256..22509
                     /locus_tag="JQ356_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012602581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HAY4620872.1"
                     /translation="MSFCWNEINSGIKSLILILCIFSLMTLSLWDDVATKFLHAAGII
                     SALYFLATPKKTITNNPTLLIFISLCLLGIVNIIWYSHYKVSGSVYTNAYRGPMETGK
                     IALCSAFIFLVLFAKNEMRTKIKFGKLILFASLATQLLFFAHAMWQHFYLNVDRVALS
                     ASHATTAGYIILFPSLLASILILKSDFRHKTTLYTINFMLSLCAVIVTETRAAILVFP
                     FFALILIVMDSYINKRINYKLYCFIAIALLAGVFSFKDTLLMRMNDLNNDLVNYSHDN
                     TRTSVGARLAMYEVGLKTYSPIGQSLEKRAEKIHELEEKEPRLSGALPFVDSHLHNDL
                     IDTLSTRGIPGVVLTILAFSAILIYALRTAKEPYILILLFSLLVVGLSDVILFSKPVP
                     TAVFVTIILLCAYFKAQSDQYLLDK"
     gene            complement(22579..23550)
                     /gene="rfaC"
                     /locus_tag="JQ356_000690"
     CDS             complement(22579..23550)
                     /gene="rfaC"
                     /locus_tag="JQ356_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HAY4620873.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI
                     PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAAL
                     VTRLAHGVKHGLDWQTAREPLASLFYNCKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
                     GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWG
                     APHEEERAKRLAEGFDYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKRFIEENAAMI"
     gene            complement(23554..24600)
                     /gene="rfaF"
                     /locus_tag="JQ356_000691"
     CDS             complement(23554..24600)
                     /gene="rfaF"
                     /locus_tag="JQ356_000691"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HAY4620874.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
                     PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQL
                     QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
                     FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
                     AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQR
                     VLEELNTLLLQEEA"
     gene            complement(24610..25542)
                     /gene="rfaD"
                     /locus_tag="JQ356_000692"
     CDS             complement(24610..25542)
                     /gene="rfaD"
                     /locus_tag="JQ356_000692"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HAY4620875.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LDIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
                     QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            25756..26952
                     /gene="kbl"
                     /locus_tag="JQ356_000693"
     CDS             25756..26952
                     /gene="kbl"
                     /locus_tag="JQ356_000693"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HAY4620876.1"
                     /translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
                     QLGVIA"
     gene            26962..27987
                     /gene="tdh"
                     /locus_tag="JQ356_000694"
     CDS             26962..27987
                     /gene="tdh"
                     /locus_tag="JQ356_000694"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HAY4620877.1"
                     /translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
                     NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
                     KVILSWD"
     gene            28226..29260
                     /gene="waaH"
                     /locus_tag="JQ356_000695"
                     /pseudo
     CDS             28226..29260
                     /gene="waaH"
                     /locus_tag="JQ356_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418072.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronate:LPS(HepIII) glycosyltransferase"
     gene            complement(29247..30206)
                     /locus_tag="JQ356_000696"
     CDS             complement(29247..30206)
                     /locus_tag="JQ356_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312519.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HAY4620878.1"
                     /translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
                     AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
                     IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
                     MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPLTVRVL
                     QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPV
                     YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN"
     gene            complement(30210..31493)
                     /gene="envC"
                     /locus_tag="JQ356_000697"
     CDS             complement(30210..31493)
                     /gene="envC"
                     /locus_tag="JQ356_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HAY4620879.1"
                     /translation="MRGKAINTMTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADE
                     RDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNK
                     QIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQCGQRLQAYF
                     GYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKK
                     TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEA
                     TRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIG
                     ASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQ
                     PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
     gene            complement(31503..33047)
                     /gene="gpmM"
                     /locus_tag="JQ356_000698"
                     /gene_synonym="pgmI"
     CDS             complement(31503..33047)
                     /gene="gpmM"
                     /locus_tag="JQ356_000698"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HAY4620880.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
                     VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
                     DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
                     MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVAGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            33292..33723
                     /locus_tag="JQ356_000699"
     CDS             33292..33723
                     /locus_tag="JQ356_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HAY4620881.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
                     SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
     gene            33865..34116
                     /gene="grxC"
                     /locus_tag="JQ356_000700"
     CDS             33865..34116
                     /gene="grxC"
                     /locus_tag="JQ356_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HAY4620882.1"
                     /translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
     gene            34179..34646
                     /gene="secB"
                     /locus_tag="JQ356_000701"
     CDS             34179..34646
                     /gene="secB"
                     /locus_tag="JQ356_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HAY4620883.1"
                     /translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
                     DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
                     PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            34646..35665
                     /gene="gpsA"
                     /locus_tag="JQ356_000702"
     CDS             34646..35665
                     /gene="gpsA"
                     /locus_tag="JQ356_000702"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HAY4620884.1"
                     /translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
                     ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     QTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLAEMSRLGAALGAEPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
                     QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
                     ERSSH"
     gene            35745..36566
                     /gene="cysE"
                     /locus_tag="JQ356_000703"
     CDS             35745..36566
                     /gene="cysE"
                     /locus_tag="JQ356_000703"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HAY4620885.1"
                     /translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
     gene            complement(36619..37092)
                     /gene="trmL"
                     /locus_tag="JQ356_000704"
     CDS             complement(36619..37092)
                     /gene="trmL"
                     /locus_tag="JQ356_000704"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HAY4620886.1"
                     /translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
                     TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD"
BASE COUNT         9224 a         8862 c         9272 g         9866 t
ORIGIN      
        1 acgcatggtt tacctccaga cgtttagcga gccagcgttg cgacaggcgg gtgagttctc
       61 ctttgcgctg ctcatattcc atgcccatat caattaacgt gatattggtg ctttcgagat
      121 aggcgaggtg ttcaagctgt gctgcgttca tgctgtcccg tggttcgcca gtaatgccat
      181 ttgcctgcgc ccactgcttc gccgtcatgc cacccagcac gatacgggcg atcatgttgc
      241 tctcgttgct gtagtggcgc tgctgcgtcg ttttgcccat ctcggcacgg gccatattca
      301 gcgcatcgca cattggctta aagttgtttg cggcactgag acgggctttt agctggcgac
      361 gatagcgggc ggcgatttca ggcacgctac gctgtaattc ttcctcgcac tggatgaaat
      421 aacggcggat agcgcggccc tgctcgttgc gttcaaccat tgccacttct ttagccatat
      481 ccagcgatag caggtaatca tgctctattt gctggcgagt ttttgcgctc gcccgttttg
      541 gcgtgctcaa attttcaaca cggataaaat cggttccggc aataaaaccg tactggtcaa
      601 ttcggccttt aatccagtta gtaaagtcgc ggcccacccc cagcgcttta tgcaacgcct
      661 tagcgctcac aatattggct tcacgcccgc caatgcgtcc ggcaataacg ggaacaatag
      721 cggcaaagtc gttgccgtta attactcccg tgttaacgtt gggttgcggg gcggcccccg
      781 aactgaatcg gcttttttcg atagtcatat tttcggctcc gttatgcggc ggtgagattg
      841 tccgggtata gattgagaat gtcggcaatt tcaggctgag aaagtccctg atagccgcca
      901 gcgtcggcgt tatggttcac aagccgaata acttttagaa cgtcaccgcg cccggtaaag
      961 cgatagcgta aatgtgaccc tatcccgtcg gggttctttt cgtctatacg ctcaagctga
     1021 atatcaagcc tgcgctctaa ctcgctggcg tagttccttc cagacgaaag gcggcaataa
     1081 cgcagaatgt cattttctgt ccatccctct ataccagtac gcagcatata gactctggca
     1141 cgatgctttt tcggtgtgcg ctttggtgct tgaagggatt ttgtaagggg cgtaacatca
     1201 gatacgcgaa tatctgaatt agccgcctgt aatgggcggt ttttcttttc catcaggcca
     1261 ccttcccgcg gcgttctgcc agccagttgt gaatctcaac cgcatcaaac gcagttattt
     1321 tttctcccag ctttaccgga cgtggtagtg aaccgtttct tactttacgg tcgatggtgg
     1381 atacactaac gcccagcaat tcagccaggc ggaagcgtct gatatagcct tttgtaggga
     1441 tagtgtcgat gttcatgatt cccgtaacct cttagcgata gttgttgctt cgttacgggt
     1501 atttaatggc gtgcacgctc aaaaaggaat gatcgtattt tttactatcg tgatagtaaa
     1561 atttactatc accttttttt ccctgccgtg gtgcgttctt ccggtgttct gtctgcgtcg
     1621 gctatgagtt tcttcaggta atctatggat ggctcatcat agccgccccc caaaagcgcc
     1681 cagtggttta ttgtggcgtt cgcccatgct tcgttggttt ccttcccgtt cttcccttta
     1741 cactcttctg ggtagtgccg cttcacataa atcaacgcca agaggcaaat ttcgcgcttt
     1801 tgcctgtggc gctctctgtt tccgtgctca acgtttttaa catcctcata aagagcttgt
     1861 aagtttatgc gagtttcggg gctgtatatg ggctggtttt tgtccatgca ttcgccgata
     1921 tattcaaccc acggccttgt tatgtacaaa tcctctacgg atatttcgtg gaaggcatgt
     1981 tttgtataat cgagaaaaaa ataataattc gcacttacgt ctagttctct ttttctgtgt
     2041 gcggggctga atatgcgtgc gggagtgtca atagaatcaa gccctgcgat gtcgagtata
     2101 taggaggcgt taacatgcca tagcccaagc acatggcaat ctatatgatt tacaacgcct
     2161 gccttaaagc ttttttcgtc ctctacttca gtgattatgt cggcaagtaa taagcagtct
     2221 tctttgacgt ctgggaataa agagcaattg cggtaaagac tcgcgatgct atgtaatgtg
     2281 ccgtcgtagc cgcaaaggta cgcgctcaaa tatatagatt ctgccgccgc cataatcaaa
     2341 agatcatcaa tatctatttc taataattcg gctgctctgt taagcctgaa aaaaggggcg
     2401 ggtggtaatt ttttcattgt gtcacctttt acgctgcgcc ttattttgtg attgagccag
     2461 gcggtaaggc ttcccgcttt tcgccccgtc gagctaggct caatctattc agttagttcg
     2521 cccttctgag aggcgttacg ttgtagtctt ttccgctttc cagtgccacc agcagatcag
     2581 cccactgtgc cagtgctgct ttacgctcat caaaatactg atggcggtta taaatcccct
     2641 ctacgccctt aatgcgatga ttgaggcatc gttccgccac aacaggatca acacccaacg
     2701 ctgctaaatg agtacgtgcg gtgcgtcgaa agtcgtgaat cgtgaaatta ggcacatccg
     2761 gcatttcggc gcgaacctta gccagtgcta cgggtaaagt gctttcctga atatgtggga
     2821 tcattctgtt ttgcatcttc ctggccggaa gcacccatgc gctattacat gaaaaggtgt
     2881 gtagctctct caaccattca acggctgggg aaggtagagg tatatcaata gggtctccgt
     2941 ttttgctgcg ttcttccggc aaatgccata ccgcaccatc taaatcaaac tcttcccatc
     3001 gtgcggcgca taattccatt ttgcggacgc ataacgctaa cagtaatttg aacgtgattt
     3061 cgttctggcg actgaatccc ttagccgtgc gcatggcttt gaatagctgg attaactcat
     3121 cgcgggttaa ccagcggtca cgggcagctt ctttccctcc ggcgtctgcc acctcaaagg
     3181 ctgaacaggg gttaatctct agcgcgtgcc gtttgattcc gtagtcgaat atgcggcgcg
     3241 tccatctcag cacgtccgtt gctatggtcg gcgctccacg gtcaacaata cctttcagca
     3301 tgtcatcgat atggcgcggt ttcacgtcct ctaccttcat gctgccaatg caggggttta
     3361 tatctttgtc gatacggcgg cggagtatat cggggtgctt ccagcgcggg aggatctgac
     3421 gctcaaagta ttcagcggca agctctgaaa cgcgcatagc gttcttctct gcttccatct
     3481 tcgccagtgc ttcggttttg cgcttctgct tctctcctgc aacgtcatag cccagcgcaa
     3541 cgcgagccga tagctctttg gctgtctctc tggcctttga tagtgatagc tcgctatacg
     3601 aaccaattag catggcgcgg gacttccctg cgagtttata gcggaatctc catgtggggg
     3661 ttttgtcggc ttcacggtaa cgtaggtata aaccgttacc gtctgcccgc ccctcgaatc
     3721 gctctccgct cttaatccat gcgcggatct gcatgtctgt tagttttggc attttgcgaa
     3781 tatccaaact ttgaataggg ggtgtaccca aagcaatgta cccaaacctc attgggtaca
     3841 cctttgtgta caccataatc atgcgctttg ttgcgtcttt atgatagccc atgataacaa
     3901 aaaagcccgc tgggttgcgg gcttggtgtg atttatgcgt cgtcctaaat gttgctgata
     3961 gcttactcga tattctgaat ctgctcgcgc atctgctcaa tcaacacttt cagctcaatc
     4021 gcggagtttg tcacttcggc attgatagac ttcgacgcaa gagtgttcga ctcgcggttg
     4081 aattcctgca tcataaagtc cagacgacga ccaacggctt cttttttctt cagaatgttg
     4141 taggtctctt tgacatgcgc ttccaggcgg tccagttctt cggcaacgtc aattcgttgt
     4201 gccagcagaa ccagctcctg ctccagacgg ttgttttcca actgaacctg agcatcttcc
     4261 agcttcgcga ccagacgctc acgctgccat tgcaggattt ccggcatatg ggcgcggact
     4321 ttgaccactt cggcggtgac gccttccaga cgctgctcga tcaatgcttt cagtgcctga
     4381 ccttcggttt cgcgcgcgac aataaagtcg tccagcgtac catccagcgc cgcgagaatt
     4441 tcagcggcaa tggcgtcaag atcctgctcc tgggctgcca tcacgcccgg ccagcgtaga
     4501 atatcaaccg ggttgatttc cccttcgtca ctctgcattt ttacccagtt cgcggcagtt
     4561 accagctgtt tagccagttt ttcgttgagg atcagctcac cttgcgcgct aatatctggc
     4621 tcatagcgca gggtacattc cactttaccg cgcgtcaggc gagaacgaat acgctcgcga
     4681 acgacaggtt caaggctacg gaactgctcc ggcagacgaa agtaagtttc cagataacgc
     4741 tggtttaccg agcgcatttc ccaggttgcg ctcccccatt cacccttgat ttcacgccgg
     4801 gcgtaggcgg tcatactgcg gatcatagac gttcctgttt ataaaaggag aggtggaagg
     4861 attatagcca tcgatgcctt gtcaggatag gaataaccgc cggaagtccg tataatgcgc
     4921 agccacattt gtttcaagcc ggagatttca atatgcgtcc agcaggccgt agcaataatc
     4981 aggtgcgtcc cgttaccctg actcgtaact atacaaaaca tgcagaaggc tcggtgctgg
     5041 tcgaatttgg cgataccaaa gtgttgtgta ccgcctctat tgaagaaggc gtgccgcgct
     5101 tcctgaaagg tcagggccag ggctggatca ccgcagagta cggcatgctg ccacgttcta
     5161 cccacacccg taacgctcgt gaagcggcga aaggtaagca gggtggacgc acaatggaaa
     5221 tccagcgtct gatcgcccgt gctcttcgcg cggcagtaga tttgaaagcg ctgggtgagt
     5281 tcaccattac gctggactgc gacgtgcttc aggctgatgg tggcacgcgt accgcgtcga
     5341 ttacgggtgc ctgcgtggcg ctggcagatg cgctacagaa gctggtggaa aacggcaagc
     5401 tgaaaaccaa cccgatgaaa gggatggtag ccgcagtttc tgtcggaatt gtgaacggcg
     5461 aagcggtttg cgatctggaa tacgttgaag actctgccgc agagaccgac atgaacgtag
     5521 tgatgaccga agacgggcgc atcattgaag tgcaggggac ggcagaaggc gagccgttca
     5581 cccatgaaga gctactcacc ttgttggctc tggcccgagg gggaatcgaa tccattgtag
     5641 cgacgcagaa ggcggcgctg gcaaactgat ttttaaggcg actgatgagt cgcctttttt
     5701 ttgtctgtag aaaagtaaga tgaggagcga aggcatgaaa ccatatcagc gccagtttat
     5761 tgaatttgcg cttggcaagc aggtgttaaa gtttggcgag tttacgttga agtccgggcg
     5821 caaaagcccc tatttcttca acgccgggct gtttaatacc gggcgcgatc tggcactgtt
     5881 aggccgtttt tacgctgaag cgttggtgga ttccggcctt gagttcgatc tgctgtttgg
     5941 ccctgcttac aaagggatcc cgattgccac cactaccgcc gtggcgctgg cggagcatca
     6001 tgaccttgac ctgccgtact gctttaaccg caaagaggca aaagaccacg gtgaaggcgg
     6061 caatctggtt ggtagcgcgt tacaaggacg cgtaatgctg gtagatgatg tgatcaccgc
     6121 cggaacggcg attcgcgaat cgatggagat tattcaggct aatggcgcga cgcttgctgg
     6181 cgtgttgatt tcgcttgatc gtcaggaacg ggggcgcggc gagatttcgg cgattcagga
     6241 agttgagcgt gattacaact gcaaagtgat ctctatcatc accctgaaag acctgattgc
     6301 ttacctggaa gagaagccgg aaatggcgga acatctggcg gcggttaagg cctatcgcga
     6361 agagtttggc gtttaaagaa actcgccgga tgaaaagtca tccggcgtca tattactgca
     6421 actgtgccgc aattagcggc cagcgggcgt caaaatcatc cgtcgggcgg tatttaaatt
     6481 cgctgcggac aaaacgtgac agcatacctt cacagaaggc caggatctgg cttgccagca
     6541 gggtttcatc ggtggtgtaa ccttcaccct cacgcattct cttttcacgc aatacctgac
     6601 gcagctgcgc ttcaatacgc tcgaacagct ggttgatgcg cccttgcagg cgatcctgtt
     6661 caaacattag cgcatgacca gtgaggatgc gggtcaggcc aggattacgc tcaccaaaac
     6721 cgagaagcag caacacaatc agacgcaggc gcgctgtggt gtctttctca tctttcagaa
     6781 tcaggttgat gcgagtaatc aggctatctt cgataaactc aatcaggcta tcgaacatgc
     6841 gggtcttact ggggaagtgg cgatacagtg ccgcttcgga aacgccgaca gaggcggcca
     6901 gttttgccgt cgtgatacgt tggcttccat cgctggattc cagcatcagc gccagagact
     6961 gaagtatttc ctcgcgacgg ttccttttcg cagtttgttt ttctgccatg ttacaaaata
     7021 cccctgaaaa taagcacttg ccaggcggca cccacgctat gaccgcaaac gaaatgtttg
     7081 cggctatgtt atgacgttat tcggatgcgt atgtgttact gacgaccaga gtgaccaaag
     7141 ccgccttcac cgcggtcggt ggcgtcgaaa tcttccacca gattaaattc agcctgtact
     7201 accggaacaa aaatcatctg ggcgatgcgt tcgccaggtt gaatggtgaa gctgtcctga
     7261 ccacggttcc acacggaaat catcaactgg ccctgatagt cggaatcgat caatcctacc
     7321 aggttaccaa gcacgatacc gtgcttatgt cccaatccgg agcgcggcag catcattgcc
     7381 gccagtgaag gatcggcaat atgaatcgcc agcccggtcg gaaccagcgt agtgtcaccc
     7441 ggagccagtt ctacggcgtc gtcgagacag gcacgcaggt caagtccggc agagccagag
     7501 gtggcataag tcgggagcgg aaattccttc ccaacgcgcg ggtccagaat cttaacgtcg
     7561 atttttttca tcataacggg tcacgatctc gtcgagtaat agttggccaa ggagctcttt
     7621 gcgctcaagc ggtaagactt tatctccgtc ctgccagaaa aggtgtaatg cgttgttttc
     7681 gctgttaaat ccttgagttg gctgggaaac atcgttcgcg cagatcagat caaggttttt
     7741 acggatacgt ttttgccggg cgtattcttc cacattattt gtttcggcgg caaatccaac
     7801 gacgtagggt cgatggtctt ttagtgcggc aacgcctgcg acgatatcgg ggtttttaac
     7861 catttttatt gttaattcat caccctgcgt ggcctgcttt ttgatttttt ctggggccac
     7921 ggtagctgcg cgataatccg ccacggcggc gcagccgata aaaatatttt gctgctgtac
     7981 agaagcattc acggcggctt ccatttccag cgcggtcatc acatcaacac gtttaacaaa
     8041 cggtggcgtc ggtagtgaaa ccggacctga taccagcgtg acgttcgcgc cacgacgggc
     8101 agcggcggcg gcgatagcaa aacccatctt gccggagctg tgattagaga tataacgcac
     8161 gggatcgagc ggttcacgcg tcggaccggc ggtaatcata atgttcagat gtttcaggtc
     8221 gttgacgggc gaaaaatgcg ccaccgccat atccacaatg gttaacggat cgagcattcg
     8281 cccaggaccg atatcaccac aagcctgact gccactgtct ggcccccaga tgagcaaacc
     8341 acgggaagca agcccctcta aattatgctg cgtggcagcg gcacggtaca tctgctggtt
     8401 catggcgggg agcacggcta caggcgcagg tgtagccaga caaatcgtcg ataccaggtc
     8461 attcgccatt ccggcagcaa cacgggcaat caaatctgcc gtggcagggg cgagaatcac
     8521 taaatcagcc catttaccca gctcaatatg gcccatagcg gcttcggctg ccgggtccag
     8581 caaactgtcg gaaacgggat aaccagaaac cgcctgcaag ctaagtgggg tgataaaggc
     8641 ttttgccgct tcggtcatgg ctacgcggac gtcggccccg cgatcgcgca aacgacgcac
     8701 cagttcaggg gttttatagg cagcaatacc gccgctaacg ccgagaacga tttttttacc
     8761 ggccaggctc atgatgattt ttcctgttgg gtgacaccag aagttggcga ttttatcaca
     8821 atacttttgt tgtcgtgcct tcacctgaga atcactttgc gaggcgcttt ccaggattga
     8881 aaactggccg tcgatttaac ggaacggcta tgacaggatg cgagcaccac aaaggaggtg
     8941 aaggtgaaaa acaattcaca gctgttgatg ccgcgcgaaa aaatgctgaa gtttggtatt
     9001 agcgccttaa cggatgtcga gctgctggcg ctatttctgc gtaccggaac gcgcggtaaa
     9061 gatgtattaa ccctggcaaa agagatgctg gagaatttcg gctctcttta tggcttgtta
     9121 acctctgaat atgaacaatt tagtggcgtt catggaattg gcgtggcgaa atttgcccag
     9181 ttaaagggga ttgctgaact ggcgcggcgt tactacaacg tgcggatgcg tgaagaaagc
     9241 cctttactca gcccggagat gacgcgggaa tttttacaaa gccagcttac gggtgaggag
     9301 cgggagatct ttatggtgat ctttctcgac tcacaacacc gggttataac gcatagccgt
     9361 cttttttccg gcacgctaaa ccatgttgaa gtccatcctc gggaaattat ccgcgaagcg
     9421 ataaaaataa acgcctcggc gctgatcctt gcacataatc acccttcggg ttgtgctgaa
     9481 cccagtaaag cggataaact cattactgaa cggataataa agagttgtca gttcatggat
     9541 ttacgcgtgc tcgaccatat cgtgattggg cgtggagagt atgtttcttt tgccgaacgc
     9601 ggctggattt aacccgctat gcgcgatcct tcgggatctt tgtctgttcg ggacttgagc
     9661 acatcgctga gtcagcgtat actacgccac ctttgagaat ctcgggtttg gcatttgggc
     9721 ctggcaatcg agagttcaca tagaactgcg atgactgggc tgtaaagcct gacgaggcgc
     9781 caatacccca tacgaagctc gagctaattt gatttttgga gaatagacat gtcccgagtc
     9841 tgccaagtta ctggcaagcg tccggtgacc ggtaacaacc gttcccacgc actgaacgcg
     9901 actaaacgcc gtttcctgcc gaacctgcac tctcaccgtt tctgggttga gagcgagaag
     9961 cgttttgtca ccctgcgcgt atctgctaaa ggtatgcgtg taatcgataa aaaaggcatc
    10021 gatacagttc tggctgaact gcgtgcccgt agcgaaaagt actaagtact tagaggaaat
    10081 aaatcatggc taaaggtatt cgtgagaaaa tcaagctggt ttcttctgct ggtactggtc
    10141 acttctatac cactacgaag aacaaacgta ctaagccgga aaaactggaa ctgaaaaaat
    10201 tcgatccagt tgttcgccag cacgtgatct acaaagaagc gaaaatcaaa taattctcgc
    10261 tttgatgtaa caaaaaacct cgctccggcg gggttttttg ttatctgctt gcccccatat
    10321 tgactgcatc tgttcattcc tggagatgct atgcctgaat tacccgaagt tgaaaccagc
    10381 cgccgcggca tagaaccgca tctcgttggt gcaaccattc ttcatgcagt ggtgcgcaac
    10441 ggacgcttgc gctggccggt ttcagaagag atctaccgtt taagcgacca accagtgctt
    10501 agcgtgcagc ggcgggctaa atatctgctg ctggagctgc ctgagggctg gattatcatt
    10561 catttaggga tgtctggcag cctgcgcatc cttccagaag aacttccccc tgaaaagcat
    10621 gaccatgtgg atttggtgat gagcaacggc aaagtgctgc gctacaccga tccgcgccgc
    10681 tttggtgcct ggctgtggac caaagagctg gaagggcata atgtgctggc ccatcttgga
    10741 ccggagccgc ttagcgacga tttcaatggt gagtatctgc atcagaagtg cgcgaagaaa
    10801 aaaacggcga ttaaaccgtg gctgatggat aacaagctgg tggtaggggt agggaatatc
    10861 tatgccagcg aatcactgtt tgcggcgggg atccatccgg atcggctggc gtcatcactg
    10921 tcgctggcag agtgtgaatt gttagctcgg gtgattaaag cggtgttgct gcgttcgatt
    10981 gagcagggtg gtacaacgct gaaagatttt ctgcaaagtg atggtaaacc gggctatttc
    11041 gctcaggaat tgcaggttta cgggcgaaaa ggtgagccgt gtcgggtgtg cggtacgccg
    11101 attgtggcga ctaaacatgc gcagcgggca acgttttatt gtcggcagtg ccagaagtaa
    11161 ttcatgcgcg ccggatcgca taccatccgg cataaacgct acgctaactt cgccatcagc
    11221 gcctgatgga cattctccgg caggaaatgg gtgacatcgc cctgatggcg cgccacctct
    11281 ttcaccaacg atgaagagat aaacgaccac tctttcgacg gcatcagaaa cacactttcc
    11341 agttccggca ttaagtggcg attcatatgc gccagctgca tttcatattc aaaatccgcc
    11401 accgcacgta ggccacgaat cagcaccgta gcgtgttgat tacgggcgaa gttcgccatc
    11461 aaatcactaa acccaactac ttccacgttc cccagatgcg cggttgcctg ctgtgccagc
    11521 gccacacgct cttccagggt aaacatcggt tttttactgg ggctggcggc aatcgccaga
    11581 ataacgtgat cgaacatttg cgtggcgcgc gtcacgatat cgatatgacc attggtaatg
    11641 ggatcgaaag tacccggata aatcgcccgt ttttgcataa caacctcaat gcgttttcgg
    11701 tggcaggtaa ggttccagca gttgaagcag gcgctgtagc gcgccctggt tttgatacag
    11761 tacttcaacg gcatgacggc catagaaact acggtaatcg gcgtcggtga gtaaagagga
    11821 aacctctttt gcaagcgtag tggcatcggt aacggtaatc agcccgcttg cctgctccag
    11881 ccgcgcgcaa atgtctttaa aattaaaagt atgcggcccc atcaataccg gaatagcgtg
    11941 tgcggcagct tccagcggat tatgcccacc acgttcaacc agtgaaccgc caacaaaggc
    12001 gagatcggca atgccgtaca gtaacatcaa ctcgcccatc gtatcgccaa ccacaacctg
    12061 cgtgctggtg gaggggactt cccctgaaga gcgtgtgata tagcttagtc cagcctggcg
    12121 gacaaggtta atcgcatccg ggaagcgttc tggatgacgg ggtaccagga tgagcaataa
    12181 attcgggaat tgctgtaaca atacctgatg tgcggcgatc accacactct cttcaccttc
    12241 gtgagtgctg gtggcaatcc ataccgggcg gtgtggtgcc cactggcggc gcagcgtcac
    12301 ggctttagca gccaactgcg gcgttacaga aatatcgaat ttcaggctac cggtaacggt
    12361 tacctggtta ttttttgcgc ccagcgccac aaaacgtgca ccatcttctt cattttgggc
    12421 ggcaatcagc gtaatacgac gcagcaagcg acggacgaat ttacccagtt tggcataacc
    12481 tgcggccgag cgggcagaga gtcgcgcgtt cgcgatcacc agcggaattt tacgtttatg
    12541 tagcgccgca atcaggttag gccatagttc ggtttccata atcaacacca gtttagggtc
    12601 gactttattc aggaaacgat taagtgcatc gggcaggtca tacggcagat aaacgtgctg
    12661 aacatccttc ccgaaagccg attgtacgcg ctccgaaccg gttggcgtca tggttgtaac
    12721 ggtaatcggt aaatcaggat aacgatgacg cagcgcgcgc accaacggga tcgccgccag
    12781 agtttcaccg acggagacgg agtgcagcat aatgccgcct ggttttagcg gatggcggta
    12841 aaaaccgtaa cgttcacccc agcgttttcg ataggccgga gccttacgtc cgcgcaccca
    12901 gagccgtatc cagatcagcg gctgaataag gtagagaagg gcggtgtaaa gcaattcgag
    12961 catagtaaat agctgactta tggatgtgct ggggattcta tgtatttagc tgtggcttta
    13021 ccattacttt tcccgttttt gacttaaata gcaatttacc cgccaattct tgctgaacat
    13081 ctatactttt tttgtatttt tatgcgattc attgatttct gctgtacgtg caggaaggaa
    13141 tcgcagagca acagtgaaag aatatggttg ctaatgattt tatttgattg atttctttat
    13201 tgaaaatcaa caatatgctt aaaaatcatt cgggtcggat tgccgcgaaa gaagtgatac
    13261 actagcgcgt caatatcagt gcggtatcag tattcaggta gctgttgagc ctggggcggt
    13321 agcgtgcttt ttctgcttca ccttaatcgg ataatctcaa caaaaagagt tacttgtgga
    13381 taagctattt cgaagaattt tgctcattaa gatgcgtttt catggggata tgttattaac
    13441 tactcccgtc attagttcgc tgaaaaaaaa ttaccctgac gcaaaaatcg atgtgctgct
    13501 ttatcaggac accatcccga tcctgtctga aaatccagag attaacgcgc tctacggcat
    13561 aaaaaataaa aaagcaaaag cctcagaaaa aattgccaac ttttttcatc tcatcaaggt
    13621 attacgtgcc aataagtatg accttatcgt caatctcacc gatcaatgga tggttgctat
    13681 actggttcgc ttattaaatg cccgtgtgaa aatttcccag gattatcatc atcggcagtc
    13741 tgctttttgg cgtaaaagtt tcacccattt ggtgccgttg cagggtggaa atgtggtgga
    13801 aagtaactta tccgtgctga ccccattgcg agttgattcg ttggtgaagc agacaaccat
    13861 gagttacccg cctgcaagct ggaaacgtat gcgtcgcgaa cttgatcatg ctggtgttgg
    13921 acaaaattat gtggttatcc aacctacggc gcggcaaatc ttcaaatgct gggacaacgc
    13981 caagttttcc gctgtgattg atgccttaca tgctcgtggt tatgaagttg ttctgacgtc
    14041 cggcccagat aaagacgatc tggcctgcgt caatgaaatt gcgcagggat gccagacgcc
    14101 accagtaacg gcgctggctg gaaaggtgac cttcccggaa cttggtgcgt taatcgatca
    14161 tgcgcagctg tttattggcg ttgattccgc accggcgcat attgccgctg cagttaatac
    14221 gccgctgata tcgctgtttg gtgcgacaga ccatattttc tggcgtccct ggtcaaataa
    14281 catgattcaa ttctgggcgg gagattaccg ggaaatgcca acgcgcgatc agcgtgaccg
    14341 aaatgagatg tatctttcgg ttattccggc ggcagatgtc attgctgctg tcgataaatt
    14401 actgccctcc tccacgacag gtacgtcgtt atgatcgttg ctttttgttt atataaatat
    14461 tttccctttg gcggtttgca gcgcgatttt atgcgtattg ctcagacagt cgccgcccga
    14521 ggtcatcatg ttcgggttta tacccagtcg tgggaaggcg aataccctga tgtatttgaa
    14581 ctgatcaaag tgccggttaa atcgcatacc aatcacgggc gcaatgcgga gtattttgcc
    14641 tgggtgcaaa aacatttacg cgaacatccc gtcgataaag tcgttggatt caacaaaatg
    14701 ccggggctgg acgtttatta tgccgctgat gtttgttatg ccgagaaagt cgcgcaggaa
    14761 aaaggctttt tctatcacct gacgtcacgt tatcgccatt atgccgcctt tgagcgggca
    14821 accttcgaac agggcaagcc gacacagctg ctgatgctga cagataagca aatcgccgat
    14881 ttccagaaac attatcagac tgaagcggag cgttttcata ttctgccacc ggggatttat
    14941 cctgatcgta aatatagcca gcagccagct aatagccgtg aaatcttccg taagaagaat
    15001 ggaataaccg aacaacaata tttattgttg caggtcggtt cagacttcac gcgtaaaggt
    15061 gtcgatcgtt ccattgaagc acttgcttcg ttaccggatt cgctgcgcca caacacattg
    15121 ctatatgttg ttggacagga taaaccgcga aaatttgagg cgctggcaga aaaacgcggc
    15181 gtgcgcagta atgttcactt cttctcgggg cgcaacgatg tctcggaatt aatggcggcg
    15241 gcggatttat tactgcatcc tgcctaccag gaagcagcgg gaattgtgct actggaagcg
    15301 attactgcag gattaccggt actaacaaca gccgtttgtg gctatgcgca ttatattgtc
    15361 gacgccaatt gcggcgaggc tattgctgag ccattccgcc aggaaacatt gaatgagatt
    15421 ttacgcaaag cgttaacgca atcttcattg cgccaggcct gggcggaaaa tgcgcgacat
    15481 tatgctgata cacaagattt atacagtctg ccagagaaag cggcggatat cataacgggt
    15541 ggtctggatg gttgaactta aagagccgtt tgccacgtta tggcgcggta aagatccttt
    15601 tgaggaagtt aaaaccttgc agggtgaggt ttttcgtgaa ctggaaactc gccgcactct
    15661 gcgatttgaa atggcgggca aaagctattt tctcaaatgg catcgcggca cgaccctgaa
    15721 agagataatc aaaaatttac tctcattgcg gatgccagta ttaggcgcag accgcgaatg
    15781 gagtgcgatt catcgactgc gggatgtcgg cgttgatact atgtatgggg tggcatttgg
    15841 cgaaaaaggt attaatccgc tgagcagaac ctcgtttatt attaccgaag atctgacccc
    15901 aaccatcagt ctggaagatt actgtgctga ctgggcgacc aacccaccag atgttcgcgt
    15961 aaagcgtatg cttattaagc gtgtcgcgac gatggtgcgc gatatgcatg ctgcgggcat
    16021 taaccaccgt gactgttata tctgtcattt cctgctgcac ttgccttttt ccggtaagga
    16081 agaggagtta aaaatttcgg taattgacct acaccgggcg cagcttcgca cgcgcgttcc
    16141 acgtcgttgg cgcgataaag atcttatagg gctttatttt tcttcaatga atattggcct
    16201 gactcagcgg gatatctggc ggtttatgaa agtgtatttt gccgccccgc ttaaagacat
    16261 tctcaagcag gaacaaggac tgctgtcgca agcagaagca aaagccacaa aaatcaggga
    16321 aagaacgatt cgaaaatcgt tgtaatttcc ggagagaaat atgagtgccc actattttaa
    16381 tccacaagag atgatcaata agacaatcat cttcgatgaa aggccagcgg cgtcagtggc
    16441 atcatcattc catgttgctt atggcattga taaaaacttt ctttttggtt gtggtgtttc
    16501 aatcacgtca gttttgttac ataacaacga cgtgagtttt gttttccacg tttttattga
    16561 tgatatccct gaagccgata tccagcgttt agcccaattg gcgaaaagct atcgtacctg
    16621 tatccagatc catctagtaa attgtgaacg gcttaaggca ttaccgacga ccaaaaattg
    16681 gtctattgcc atgtatttcc gttttgtaat tgcagattac tttattgatc aacaagataa
    16741 gatcctttac ctggatgctg atatcgcctg tcagggaaac ttaaagccgc tgataacaat
    16801 ggatcttgcc aataacgttg ctgctgttgt tactgaacgc gatgctaact ggtggtcgtt
    16861 acggggtcaa agtctgcagt gtaatgaact tgaaaagggc tactttaatt caggtgtcct
    16921 gttaattaat acactagcgt gggcgcagga gtccgtttct gctaaagcga tgtcgatgct
    16981 tgctgataaa gccatcgttt cccgtttcac ctatatggat caagatatcc ttaatcttat
    17041 cctgttaggg aaagttaaat tcattgatgc taaatacaat acgcaattta gtttaaatta
    17101 tgaattaaaa aaatcatttg tttgtccaat taatgatgaa accgtattaa ttcattatgt
    17161 cggcccgaca aaaccctggc attactgggc cggttatcca agtgcgcaac cttttatcaa
    17221 agccaaagaa gcatcgccct ggaaaaatga accgttaatg cggccagtta actcaaacta
    17281 tgctcgttat tgcgccaagc ataattttaa acaaaataaa ccaattaacg ggataatgaa
    17341 ttatatttat tatttttatt taaagataat aaaatgaaat tgagaaaagt taaatgaatg
    17401 aatttataaa agaacggttt tcgtatttag cagataataa aaaagaaaac gccccagagc
    17461 taaatgtttc ctacggtatc gataagaatt ttttgtatgg tgctggcgtt tcaatttctt
    17521 ccgttttgat taataattca gatattaatt ttgtctttca tgttttcact gattatgtgg
    17581 atgatgatta tttaaagtca tttaatgaaa cagcaaaaca atttaatacc tcaattattg
    17641 tatatttaat tgaccccaaa tactttgctg atctgccgac gtcacagttt tggtcatacg
    17701 cgacatactt cagggtattg tcttttgaat atctgagtga aagtatttcc acactgctgt
    17761 atctggatgc cgatgttgtt tgtaaaggaa gcctgaaacc tctcacagaa attatattta
    17821 aagatgagtt tgctgcggtc attcctgaca atgatagtac tcaggcggca tgtgcaaaac
    17881 gcctcaacat tcccgaaatg aatggacgtt atttcaatgc aggcgttatc tatgtcaatc
    17941 ttaaaaaatg gcatgaagca aatttgacac cgtatttact caaactttta cgaggggaaa
    18001 ctaaatatgg ctctcttaaa tatttagatc aggatgcgtt gaatatcgca tttaatatga
    18061 ataatatcta ccttgcgaag gattttgata ctatttatac cctgaaaaac gaactttatg
    18121 atcgtagtca tcgaaagtat cagcaaacca ttaccgataa aacagtgttg attcactata
    18181 cagggataac taaaccatgg catagctggg ctggatatcc gtctgcatca tactttaata
    18241 tcgcgcgtga acaatctccc tggaagaaat atcctcttaa agaggcgcgg actgttgcag
    18301 aaatgcagaa acaatataag catctgtttg cccatggtga gtatataaaa ggcataactt
    18361 cattaattaa gtacaagctt aagaaataaa ttactcttat gattacaagt atacgttatc
    18421 gcggcttctc attttattac aaagataatg ataataaata taaagaaatc tttgatgaaa
    18481 tactggccta taattttaaa acagtaaaag tattatgtaa tattgatgat accaaagtat
    18541 cgttgattga tacgaaatat ggtcgctatg tttttaaagt ctttgctccg aaaacgaaaa
    18601 ggaatgaacg ttttttaaaa tcttttgtaa aaggtgacta ctatcagaat ttgatcgttg
    18661 aaaccgatcg tgtcagaagt gcaggtctta cttttcctaa tgatttttat tttctggctg
    18721 agcgtaaaat tttcaactat gccagtgttt ttatcatgct tatcgagtat gtcgagggcg
    18781 tagagctcaa tgatatgccg attattccag aaaatgttaa agcagaaatt aaggcttcga
    18841 tggaaaaatt gcatgcctta aatatgctat cgggcgaccc acaccggggt aactttatcg
    18901 ttagtaaaga tggtgtcagg ataattgacc tatccggtaa aagctgtacg gcagagcgta
    18961 aagctcgtga tcgtctggcc atggaacgtc acctgggtat tgccaacgaa ataaaagatt
    19021 atggctacta ttcagtaatc tacagaacca aactacgcaa atttattaaa aaattaaaag
    19081 gcaaagcgta aaccacacag tcaaaacgga accaacatgg atttattagc agagagtatt
    19141 actgaagtcg ctgtctctgg ggaaattgct aacaccgatc gtgtgttaaa tatcgcttac
    19201 ggtattgacc gtaacttttt atttggtgcg gcagtatcta tgcaatcagt tgttatgcat
    19261 aacccggacc ttgcggttaa gtttcatctc tttaccgact acattgatga agattatcta
    19321 caacgtgtta atgcttttac cagcaaaaat gctaacgttg aagtaataat ttataaagtc
    19381 tccaatgcct ttattgatat cttccccagc ctgaaacagt ggtcttatgc aacattcttc
    19441 cgtttagttg cgttccagta tttgagtgaa actattgaaa atctgttata tatcgatgct
    19501 gatgtcatct gtaaaggctc attagctgga ttgcttgata ttaattttga tgaggataag
    19561 ttcgcagctg ttattaaaga tgtgcctttt atgcaggaaa aaccagcgaa gcgtctggct
    19621 atagagggac ttccagggaa ttatttcaac gccggtgtag tatatctgca gcttgaagca
    19681 tgggcgaaaa atgattttat gaataaagcc attgctatgc tggcaagtga cccgcagcac
    19741 acgaagtata aatgccttga tcaggatatt ttaaatattc tgttctttgg tcattgtaat
    19801 tttattagcg gcgattatga ttgcttttat ggcattgact atgagttaaa aaataaaagc
    19861 gatgaagatt ataaaaagac cattaccgat gatactaagc tgattcatta tgttggcgta
    19921 acgaagccct ggaacgactg gacgaattat ccctgccaga agtattttaa tgaggcttat
    19981 caggcttctt gctggaatga tgtggcgttt attccagcca cgaatgaaaa gcagtatcaa
    20041 gtgaaatatc aacatgcaaa gaaaaatggt gatacgttta acgcttttat ttacttcatt
    20101 aaatttaaat taaataagta taaaagaaaa ctatttggat aataataaaa atcatggatg
    20161 tctgagttac aataataatt aaggatgagt actatcatat tttattagtt caggcaagag
    20221 aacacgatga gcaatgatta ccctttagta tctataataa taccgacgta taattcatct
    20281 gattacatta ctgaaactct aacgaaatta gaaaaacaaa cttacccaaa ttttgaaatt
    20341 gttattgtta atgatggttc taaagataac acatcaaacg ttttgagaga gtatgggtta
    20401 acccactctc gattaattat tgtcaataaa gaaaatggcg gtgtttcgtc tgccaggaat
    20461 acaggtatcc gcaaggcgca aggacagttt atatgtttta tggatgatga tgatgagata
    20521 gatcctaact atctgctgaa gatgtatacc agacaacatg agacgggagg ggatgcgatt
    20581 tattgtgggc tttatggcca ttatataaaa gatggtgtta cttactcacc tataaataca
    20641 gagtttaatg aaggatcttt acttttcgac tttttttata aaaaggttag attccatata
    20701 gggtgcttgt ttataagaaa acaacttctg gaagagaata atcttttttt tgatgaagat
    20761 ttacgactag gagaagatct tgattttatc tatcgactgc taattacatg cgatatgtat
    20821 gcggttccat attatatgta taagcataac tatagagaaa attccttaat gaactcatgt
    20881 agaaccatca ctcattatcg acatgagtca tttgcgcacg aaagaatcta ctcttctgtg
    20941 atgcagttat acaaaggtaa ccggaaagaa gaaattcata cattattgag tcaaaataga
    21001 gcttatcata aaactcgtta tttatggaat gttctactta atggtgattt taaactattg
    21061 aatcaattag ttgaaagcaa tgaaaaagaa ttaagagatt gtaatcttcc tggcaagaga
    21121 gataagagac gagcaaaaat attagcatca aaaaattata ttctctggag gatggtaaga
    21181 ctggtaaata gaaaaaagaa taaacgttag atcttgcatt aaataaccca tcctcgtagc
    21241 ataggttgaa attatatgtc gttttgttgg aatgaaatta attctggtat aaagtcttta
    21301 attcttatat tatgtatttt ttctttaatg actttgtctt tatgggatga tgttgcaaca
    21361 aagtttcttc atgcagctgg aattatatct gcattgtatt ttcttgcgac accaaaaaaa
    21421 acaataacta ataatcctac tttgttaatt ttcatctcat tatgtctttt gggtatcgta
    21481 aatatcatct ggtattcaca ttataaagtt tcaggctctg tttataccaa tgcatatcgt
    21541 ggcccaatgg aaactggaaa aattgccttg tgtagcgcct ttattttctt agttcttttt
    21601 gctaaaaatg agatgagaac aaaaataaaa tttgggaaac taattctgtt cgcatccctg
    21661 gcaacgcagt tacttttttt tgcgcatgcc atgtggcaac atttctattt aaacgtcgac
    21721 cgtgttgcat tatcagcttc ccacgctaca acagcaggct acatcatcct ttttccttct
    21781 ttactggcat caattctcat tttaaaatcc gactttagac ataaaacaac attatataca
    21841 attaacttca tgcttagctt atgtgctgtc atagtaactg agacgcgtgc agccatatta
    21901 gtgtttccat tctttgcgtt aatattaatc gtaatggata gttatattaa taagcgaatt
    21961 aattataagt tatattgttt tattgcgatt gcattattag caggtgtatt ttcttttaaa
    22021 gatacattgc ttatgagaat gaatgactta aataacgatt tagttaatta ttcgcatgat
    22081 aacaccagaa cttcagtcgg tgcccgtctg gcaatgtatg aagttggctt aaaaacatat
    22141 tctccaatag gacaatcact ggaaaaacgt gcagaaaaaa tacatgagct agaagaaaaa
    22201 gagcctagat tgagtggcgc tttacctttt gtagattctc atttgcataa cgatctcata
    22261 gatacgttat caacgcgtgg tattcctgga gttgtattaa caattttagc attttcagca
    22321 atactcatat atgccttaag aactgctaaa gaaccttata ttttaatctt gcttttttca
    22381 ctactggtag taggcctaag tgatgtaata ctcttttcta aaccggttcc gactgctgtg
    22441 tttgtcacca taatattgct ttgtgcttat tttaaagcac aatcagacca atatttatta
    22501 gataagtaat gaatatatga aataaaatca gcaaggaggc tgattttatt tcaaaattat
    22561 ctattaaggg gttgtaattt aaatcatagc agcgttttct tcaatgaatc gcttaacagc
    22621 atttgctgtc aattgagaca actcattccc cggagcccta caaaccattt gattcttccc
    22681 atacccacca attaatcccg gatcggttgg tccataaacc gtgatattgg gtctatccag
    22741 tgccgccgtt aaatggctta accccgtatc caccgacact acaaatttag ccccggccag
    22801 cacgcgggca acgccttcca gactcatctt cggcaatact tcaacataat caaatccttc
    22861 cgccagtcgt ttcgcccgtt cttcctcatg cggcgcgccc cacggaagtt taatccgtat
    22921 tcctgaatca gccagtaaac caatcaattc tcgccagtgt tcttccggcc agtgtttatc
    22981 atcacgggtc gtcgcatgaa gaaatacggc atattcgcca gcatctgtag gcaggttcgt
    23041 cagaaaatgc tgtgcgatag cataatcgcc ctgggtttgc ggtttgctat agcccaaact
    23101 tttggcaaac agttcgcggg tgcgttctac ggcgtgctgc tgttttgcaa tatgatgctt
    23161 acaattgtaa aacaggctgg ctaaaggttc gcgagcggtt tgccagtcca atccatgctt
    23221 tacgccatgc gccagacgtg tcaccagtgc cgcgcttttt accagcccct gagcgtcgat
    23281 aactgcgtca tagttctctg cttgtagcgc ttcacgaaac gctttgcgtt cagcttttat
    23341 gggggccgag aaccaggctt tacgccagcg acgtattgcc acaggaataa ctcgctcaac
    23401 ggcagcgtgc caggaaggaa tctgtgcgaa cccttcttcc accacccagt caaacttaat
    23461 ccctgggatt gcctgctggg catcagtgag tgcgggcaac gtatggagaa catcgcccat
    23521 cgacgatgtt ttaacgatca aaacccgcat ccgtcaggct tcctcttgta acaatagcgt
    23581 gttgagttct tccagtacgc gctggggagt aatgtcgatc aagctctggt gataaccctc
    23641 cgcagcgtca cctttacgca ctttgtgata gccggtaatc agacggatca cgcgcgcttt
    23701 atgggatagc ggcggtgtga agtccgggct acttggacca tacagggcaa ccagcggacg
    23761 attgagcgcc gccgcaacgt gcatcaggcc agaatcgtta gtgacaatgg ctttacaggc
    23821 tgcaatcagg ataaccgctt gatcaagctg tgtttccccc gccaggttcc gacaccatgc
    23881 ctgctgctcg gtattcaaag cggcaagaat ctcattgccc gcttcatgat ctttcgcaga
    23941 gccaaacaga accacctgat aaccttcatc aatcagctgc tttgccagtt ccgcatagtg
    24001 gtagtgtggc cagcgttttg ccggaccaaa ctccgcaccc gggcaaaagc caatcatcgg
    24061 acgttctgat gaaagcgaaa attgattaca ggtatatgat ttttcacctt cgctcacctg
    24121 caactgcggc cataacaatg gctgcggcag atcttgtgcg gtacgcataa tgcctttgtc
    24181 ataggccagc gcgacatagc gttccaccat tagcggccag gcttctttat cgagcacgcg
    24241 tacatcgttg agtaaaccgt agcgcatctc gccgcgccag ccggtgcgat gaggaatacc
    24301 cgcgaagaaa ggcactaatg cagatttgaa ggagttgggt aagacgtagg cgcggtcgta
    24361 gcgcttttca cgcaggctat gacccagttt gcggcgttcg ccgatttcca gcgctccgtg
    24421 accgagaggc atagggatag cttcgttaac ttccggcatc cgcgataata atggacggca
    24481 ccatgccggt gccatcacat cgattatcgc ctggggatag cgcgcctgga gcgtgcgata
    24541 gagactttgc gacatcatca tgtcgccaac ccaagacggg ccgatcacca gtattttcat
    24601 gcagagctct tatgcgtcgc gattcagcca ggccatgtat tccgttacac cttcagcaac
    24661 ggttttgaac ggtttgtcgt aacccgccgc gcgcagattt gtcagatctg cctgagtgaa
    24721 cgcctggtag cggcctttca gcttatccgg gaacggaatg tattcgatct ggcctttctt
    24781 gtgataagcc agagtagcat ctgctacggc ctggaaggat tccgcacgac cagtaccgag
    24841 gttgaagata ccggaaacgc cattttccag gaaccacagg tttacatctg ccacgtcgcc
    24901 cacatagacg aagtcacgtt tgaagttctc gctaccttca aacagcttcg gtgattcacc
    24961 gttgttaagc tgagtgttga gatggaaagc gacgctcgcc atgctgcctt tatggccttc
    25021 acgcggtcca taaacgttga aatagcggaa gccaacaatc tgcgagttcg cttcaggcag
    25081 gatttggcga acatattcat caaacaggaa ttttgagtaa ccgtagacgt tcaacggttt
    25141 ttcgtactcg cgggattcaa taaagtcgga ggtgcgtccg ccgtaggtgg ctgcggaaga
    25201 agcgtacagg aacgggattt cgcgctccag gcagtagtgc agcagctcct tggagtattg
    25261 atagttgtta tccatcatat acttgccgtc ccactcggtg gtggaagagc atgcgccttc
    25321 gtggaaaatc gcttcgacat cgccgaactc ttcgccagcc ataatctgga tcaggaagtc
    25381 ttccttatcc atatagtccg cgatatccag atccaccagg ttcacaaact tggtgccgtc
    25441 tttcaggttg tccaccacca gaatatcggt gatgccttta tcattcaggg ccttaacgat
    25501 gttgctgccg ataaagcccg cgccgccggt aacgatgatc ataactgtaa ccttcgaatt
    25561 atggagtcag agacaatctc agacacgaat acttctatca tatcactata cggcgttggc
    25621 ttcagccatt cgccaaaagt gagattgatg gacgttattt atcctgaatt ttgcagaagt
    25681 gttaacgcgt catctcgtcg cgacgtataa gtttgggtaa tatgtgctgg aatttgccct
    25741 gtctggagaa tcgcaatgcg tggagaattt tatcagcagt taaccaacga tctggaaacc
    25801 gcacgggcgg aagggttgtt taaagaagag cgcattatta cgtctgcgca gcaagcagat
    25861 atcactgtgg ctgatggaag ccacgtcatt aacttttgtg ccaacaacta tctcgggctg
    25921 gcgaatcatc cggatctgat tgcggcagca aaggcgggaa tggattctca cggtttcggc
    25981 atggcttcgg tgcgttttat ttgcggcact caggacagcc ataaagagct tgaacaaaaa
    26041 ctggcggcat tcctggggat ggaagatgcg attctctact cttcctgctt tgatgctaac
    26101 ggtggactgt ttgaaacgct gctgggtgcg gaagacgcca ttatctccga cgcactgaac
    26161 cacgcgtcta ttattgatgg tgtgcgtctg tgcaaagcta aacgctatcg ctatgccaac
    26221 aacgatatgc aggagctgga agcacgtctg aaagaagcgc gtgaagccgg tgcgcgtcat
    26281 gtgctgattg ccaccgatgg tgtgttctca atggacggcg tgattgccaa cctgaaaggc
    26341 gtttgcgatc tggcagataa atacgatgcc ttggtgatgg tggatgactc ccacgcggtc
    26401 ggttttgtcg gtgaaaatgg tcgtggttcc catgaatact gcgatgtgat gggccgggtc
    26461 gatattatca ccggtacgct tggtaaagcg ctgggcgggg cttctggtgg ttataccgcg
    26521 gcgcgcaaag aggtggttga gtggctgcgc cagcgttctc gtccgtacct gttctccaac
    26581 tcgctggcac cggccattgt tgccgcgtcc atcaaagtac tggagatggt cgaagcgggc
    26641 agcgaactgc gtgaccgtct gtgggcgaac gcgcgtcagt tccgtgagca aatgtcggcg
    26701 gcgggcttta ccctggcggg agccgatcac gccattattc cggtcatgct tggtgatgcg
    26761 gtagtggcgc agaaatttgc ccgagagctg caaaaagagg gcatttacgt caccggtttc
    26821 ttctatccgg tcgttccgaa aggtcaggcg cgtattcgta cccagatgtc tgcggcgcat
    26881 acccctgagc aaattacgcg tgcagtagaa gcattcacgc gtattggtaa acaactgggc
    26941 gttatcgcct gaggatgtga gatgaaagcg ttatccaaac tgaaagcgga agagggcatc
    27001 tggatgaccg acgtccctgt accggaactc gggcataacg atctgctgat taaaatccgt
    27061 aaaacagcca tctgcgggac tgacgttcac atctataact gggatgagtg gtcgcaaaaa
    27121 accatcccgg tgccgatggt cgtaggccat gaatatgtcg gtgaagtggt aggtattggt
    27181 caggaagtga aaggcttcaa aatcggcgat cgcgtttctg gcgaaggcca tatcacctgc
    27241 ggtcactgtc gcaactgtcg tggcggtcgt acccatctgt gccgcaacac gatcggcgtc
    27301 ggcgttaacc gtccgggctg cttcgccgaa tatctggtga tcccggcgtt caacgccttc
    27361 aaaatcccag acaatatctc cgacgacctg gcttccattt ttgatccctt cggtaacgcc
    27421 gtgcataccg cgctgtcgtt cgatctggtt ggcgaggatg tgctggtctc tggtgcaggt
    27481 ccgataggta ttatggctgc ggcggtggcg aaacacgttg gtgcacgcaa tgtggtgatc
    27541 actgatgtta acgaataccg ccttgagctg gcgcgcaaaa tgggtatcac ccgtgcggtt
    27601 aacgtcgcga aagaaaacct taatgatgtg atggctgaac tgggcatgac cgaaggcttt
    27661 gatgtcggtc tggaaatgtc cggtgcgccg ccagcgtttc gtaccatgct tgacaccatg
    27721 aaccacggcg gccgtattgc gatgctgggt attccgccgt ctgatatgtc tatcgactgg
    27781 accaaagtga tctttaaagg cttgttcatt aaaggtattt acggtcgtga gatgtttgaa
    27841 acctggtaca agatggcggc gctgattcag tctggcctcg atctctcgcc gatcattacc
    27901 catcgtttct ctatcgatga tttccagaag ggctttgacg ctatgcgttc gggccagtcc
    27961 gggaaagtaa ttctgagctg ggattaacac gaacaagggc tggtattcca gcccttttat
    28021 ctggggataa tctgttgaat atgtaaaatc ctgtcagtgt aataaagagt tcgtaattgc
    28081 gctgatctct tatatagctg ttctcattat ctctctaccc tgaagtgact ctctcacctg
    28141 taaaaataat atctcacagg cttaatagtt tcttaataca aagcctgtaa aacgtcagga
    28201 taacttcaga ggtcgtcggt aatttatgat gaacagcacc aataaactta gtgttattat
    28261 tccgttatat aatgcgggcg atgatttccg cacttgtatg gaatctttaa ttacgcaaac
    28321 ctagactgct ctggaaatca ttattattaa cgatggttca acggataatt ctgttgaaat
    28381 agcaaagcat tacgcagaaa actatccgca cgttcgtttg ttgcatcagg cgaatgctgg
    28441 cgcatcggta gcgcgtaatc gtgggatcga ggtggcgacg ggcaaatatg tcgcttttgt
    28501 cgatgctgac gatgaggtct atcccaccat gtacgaaacg ctgatgacca tggcgttaga
    28561 ggacgacctc gacgtggcgc agtgcaacgc tgactggtct tttcgtgaaa cgggagaaac
    28621 ctggcaatcc atccccagcg atcgccttcg ctcaaccggc gtattaaccg gcccggactg
    28681 gctgcggatg gggctttctt cgcgccgttg gactcacgtt gtctggatgg gggtttatcg
    28741 ccgtgatgtt attgttaaaa ataacattaa atttattgcc ggattacatc atcaggatat
    28801 tgtctggacg acagaattca tgtttaacgc gctgcgtgcg cgatataccg agcaatcatt
    28861 atataaatat tatctgcata atacgtcagt gagtcggttg catagacaag ggaataaaaa
    28921 ccttaattat caacgtcact atattaagat tacccgcctg ctggagaaat taaatcgaaa
    28981 ttatgccgac aaaattacga tttatccgga atttcatcag caaataactt acgaagcatt
    29041 gcgtgtttgc catgcggtgc gcaaagagcc ggatattctt acccgccaac ggatgattgc
    29101 cgagatattt acttccggta tgtataagcg cctgattacc aatgtgcgca gcgtgaaggt
    29161 cggttaccag gcgttactgt ggtctttccg cttatggcaa tggcgcgaca aaacgcggtc
    29221 gcaccatcgc attacgcgta gcgcctttaa tttgcgctag cgttaaactt cgccgcttcg
    29281 ggctgtttgc cccagccttg ccactgatgc tggaagtaaa cgatcagcgt gctctggctg
    29341 atgctttcgc ttaatacttc aaagaagcga ttagcataaa caggttctat cggtttcttc
    29401 ggtttgcaca gcttcacgcc acggaacgga ttacgcggtg catcaggcac agcgtttttc
    29461 ggcggtgtag aagtatcaac ctgcggttca ttcagcaagc tgctggcttt caccagcgta
    29521 atgtctggcg gcaggttata aaccatctgt tgtagcacgc gtaccgttaa agggtgagga
    29581 tgcccaatgg caatggttga accgttgcga cgcgccagat caattgcgcg attaaattgc
    29641 acacggatgt ccgcttcgtt ctgcgaatcg tcgaggaaca ccttccgttt aataaccttc
    29701 acgccagtac cttgcgcggc gcgcatcgcc tgggtattac cgatggttac gctgtcgagg
    29761 aagtaaagat tgtaacgctc cagtgcctgc atcactttct gcataccaaa caggttagag
    29821 gtcatcttgc tacccatgtg gttgttgatc cccacggcat agggcacgtt attgaccgca
    29881 ctacgaataa tgcgctcaat ttcgtcgctg ctcatctccg ggcgcagcgt atttttctcc
    29941 agcggctgtt tactcagtgg tgccatcggg agatgaatca acacttcgtg cccgctgtta
    30001 tgcgctttgg tcgccatctc tctggcgtgc ggtgaatcgg gtaatacagc gacggagata
    30061 gcggagggca tcgccagcac ctggttttcg ttgtgcgggc gatacccaaa atcatcaatg
    30121 acgatggcaa gtttgccagc aagtacgggg gaggagagcg ccaacagagc ggcaaatgca
    30181 agaacgttac gacgaaatgg aaacaaaact tatcttccca accacggctg tggattgacc
    30241 gcctgaccct ggcggcgaat ttcgaaatag agtgaaggcc gaccctgacc gccactgctg
    30301 cccaccagtg caattggctg gcccgcgcga acctgcgaac caacgctcac cagtgcgctc
    30361 tgattatagc cgtaaagact catgtcgcct ttaccgtgct caaccaccac caccagaccg
    30421 taaccttgca gccagtcagc cagaatcact cgaccgtcgg caattgcttt aacttcagta
    30481 ccttcagagg caccgataac catccctttc cagcgtaatt caccctgtag ctgctcgcca
    30541 tagcgatgca gcgtcggccc gcgaaccggc cagaatgcct gaccacgcgg cgcacccaga
    30601 ccaccagttc gggacatcag cgatttttcg ctttcggtcg gtttgtaggt ggtgcctttg
    30661 cgcgtcgctt ctttctggcg gtcgcgaacc gcctgggcct cacgcgcttc tcgttcagca
    30721 cgcgctttcg ccgcggcttc cgcacgggca atgctgttac gcagacggga ttcgttggca
    30781 cgcagttcac ttagctgctg ctgaccttgc tggatggaag attccagccc cgccagcgtc
    30841 tttttacgct cgttcagagc ctgagtcagt ttcgcctgtt gggcgcgctg ttcatataac
    30901 agcgtttgtt gctcgctttg tttctcttcc agttcagcac gctgcatggc gacttcttca
    30961 cgcgtttgct tcaactgggc aatggtttct tgtcgcgcct ggttgagata gccgaaataa
    31021 gcctgtaaac gctgtccaca ctggctttct tcaccgctga gaattagctg aataccggta
    31081 tgctcgccct gacggaatgc ggcatccagt tgtgcggcga ggctgcgctc ctgggcggct
    31141 ttttgctgct ccagtttggc aatcgacgcg ttcatctcat caatctgttt attgagttga
    31201 ttgagcgtgt tttgcgtttc gcgcagctta cgggtggctt cagagatcgc ttcttcctgc
    31261 tttttcaatt gtgcgagcag gcttgcgcgt tgttgttgct tttggcgtac cgcgcgctct
    31321 tttgcggcga tatcggcctg aatagatttg agttggtcac gctcatccgc gtgggcggaa
    31381 aaggcgcaca acaatacgcc agcgctaaga acgctggcgt agatgatggg cctgattgca
    31441 aacctgcgcg gtttcacggc ccgtgtcatg gtattaatcg cctttcccct catggggagg
    31501 gattattcca cgatgaacag cggcttacca gtcatctctt gcgggatttc catacccatc
    31561 agcgacaaca tggtcggcgc gatgtcagaa agtttgccgc ctgcaaccgc tttcacgttc
    31621 ttatcaccaa cgtaaatcag cggaactggc aggttggtgt gtgccgtgtg tgcctgaccc
    31681 gttgccggat cgcgcatctg ttcagcgtta ccgtggtcag cggtgatcag cagttgtcca
    31741 cccacggact caaccgcttt cgcgacttct tccacgcagt gatccagtgc ttcaaccgct
    31801 ttaaccgccg cttccatcac cccggtgtga cctaccatgt cgccgttcgg atagttacag
    31861 ataatggtgt cgtatttgcc gctcttgatg gccgcaacca gtttttcggt cagctctgcg
    31921 gagctcattt ccggttgcag atcgtaggta gccactttcg gtgagttgat cagaatgcga
    31981 tcttcgcctt tgaatgactc ttctacgcca ccgttgaaga agaaagtaac gtgggcatat
    32041 ttttcggttt cggaaatacg caactgagtt ttgtcgtttt tcgccatcca ctcgccgaag
    32101 gtgttaacca gggaagcggg tgggtaagca accgcagttt tgatgtcagc ggcgtattcg
    32161 gtcagcatca cgaaatcgac gttaaccact ttcttacgcg cgaagccgtc gaaatctgcg
    32221 tttacgaatg cacgagtgat ttcgcgcgcg cggtcagcac ggaagttcat gaaaatcagc
    32281 gcatcgccgt cttccattgc cgcatctggc tgaccttctg cacgaataac ggtcgctttc
    32341 acgaactcgt cgttttcgtc gcgagcataa gctgcctgca aaccagcaac ggcagtatcg
    32401 gcctggaact caccctgcgc cagagtcagc aggtcatagg ctttttcaac gcgatcccaa
    32461 cggttatcgc ggtccatcgc gtagtaacga ccaatgatgg acgctacgcg gcctttaccc
    32521 agcgcagcaa atttctcttc aaattttttc agcgaggatt cagcactgcg cggcggggtg
    32581 tcgcgaccgt caaggaatgc gtgcaggtag attttttctg cgccgcgttc agctgccagt
    32641 tctaccatcg ccatgatgtg atcttcgtgg ctgtgtacgc cgcctgcgga gagcagaccc
    32701 ataatgtgta ctgctttacc tgcgtttttc gctttatcta ccgcgccagt cagcactgga
    32761 ttagcaaaga aagcgcgatc tttgatttca acgtccagac gagtcaggtc ctgatacacg
    32821 atgcggccgg cacccaggtt aacgtggcct acttcggagt tacccatctg acggtcaggc
    32881 agaccgactt ccagaccgga agcgtcgatc agggtatgcg gacgattggc ccacagtgca
    32941 tccattaccg gggttttagc actaaaaatg gcgttatcct gctgttcttc acgatagcca
    33001 tagccatcca gaatcaccag taccataggt tttttagaaa ccgacattgc gacaacctca
    33061 tactcaagag tcaaaatttg cgtaatttta ctacagctga atcgataaaa tagcctctga
    33121 agatcaaaat atacgaccgc tcgcggcaag ccgatgccag atttgcgctt ttttttcgtc
    33181 gtgccccgca aaattgcatt ccagttaacg cgctggctgt atttgccgca ccgcgcaggt
    33241 atactccttt cctggttttt ttaatcacta cgtcgggagt tgttaccccc catgcaagaa
    33301 attatgcaat ttgttggccg tcatcccata ctgagtatcg cttggatcgc gttactggtg
    33361 gcggttcttg tgactacgtt taagagcctg acctcgaaag tgaaggtgat tactcgtggt
    33421 gaagctacgc gtctgatcaa caaagaagac gctgtggttg tggatttacg tcagcgtgat
    33481 gacttccgta aaggccatat cgcaggttct atcaatctgt tgccgagcga aatcaaagcc
    33541 aacaatgttg gtgagcttga gaagcacaaa gacaaaccgg ttatcgtggt agacggttct
    33601 ggcatgcagt gccaggagcc tgcaaacgcg ctgacgaaag ctggttttgc gcaagtattc
    33661 gtgctgaaag agggcgttgc tggctgggct ggcgaaaact tgcctctggt gcgcggcaaa
    33721 taatttacct gtcgtctttc atgatgcagg ccgttagctg caattaggcc cccagcgact
    33781 tattgttata agcttctggg gacactccat tttgcagccg ccctgcaaca tgaaatttca
    33841 gggtaaaaaa acaggagcta aattatggcc aatgttgaaa tctataccaa agaaacctgc
    33901 ccgtattgcc atcgtgcaaa agcactgctg agcagcaagg gcgtgagttt tcaggagttg
    33961 ccgatcgatg gcaatgccgc caagcgtgaa gagatgatca aacgcagcgg tcgcaccacg
    34021 gttccccaga tttttattga cgcacagcac attggcggct gtgatgactt gtatgcattg
    34081 gatgcacgtg gtggactgga tcccctgctg aaataacgtg tgaacgttgg cattacattg
    34141 cgcagtattt aaggacaaca cttaagggtt ttctacacat gtcagaacaa aacaacactg
    34201 aaatgacttt ccagatccaa cgtatttata ccaaggatat ctctttcgaa gcgccgaacg
    34261 cgccgcacgt tttccagaaa gattggcaac cagaagttaa acttgatctg gatacggcat
    34321 cttcccaact ggcagatgac gtatacgaag tggtactgcg tgttaccgta acggcctccc
    34381 tgggcgaaga aaccgcgttc ctgtgtgaag ttcagcaggg cggtattttc tccatcgcgg
    34441 gtatcgaagg cacccagatg gcacattgcc tgggcgcata ctgcccgaac attctgttcc
    34501 cgtatgctcg tgagtgcatc accagcatgg tatcccgcgg tacattcccg caactgaacc
    34561 ttgcgccggt taacttcgat gcgctgttca tgaactattt gcagcagcag gctggcgaag
    34621 gtactgaaga acatcaggat gcctgatgaa ccaacgtaat gcttcaatga ctgtgatcgg
    34681 tgccggctcg tacggcaccg ctcttgccat taccctggca agaaatggcc acgaggttgt
    34741 cctctggggc catgaccctg aacatatcgc aacgcttgaa cgcgaccgct gtaacgccgc
    34801 gtttctcccc gatgtgcctt ttcccgatac gctccatctt gaaagcgatc tcgccactgc
    34861 gctggcagcc agccgtaata ttctcgtcgt cgtacccagc catgtctttg gtgaagtgct
    34921 gcgccagatt aaaccgctga tgcgtcctga tgcgcgtctg gtgtgggcga ccaaagggct
    34981 ggaagcggaa accggacgtc tgttacagga cgtggcgcgt gaggccttag gcgatcaaat
    35041 tccgctggcg gttatctctg gcccaacgtt tgcgaaagaa ctggcggcag gtttaccgac
    35101 ggctatttcg ttggcctcta ccgaccagac ctttgccgat gatctccaac aattgctgca
    35161 ctgtggcaaa agtttccgcg tttacagcaa cccggatttc atcggtgtgc agcttggcgg
    35221 tgcggtgaaa aacgtcattg ccattggcgc ggggatgtcc gacggtatcg gttttggtgc
    35281 gaatgcgcgt acggcactga tcacccgtgg gctggctgaa atgtcgcgtc ttggcgcggc
    35341 gctgggtgcc gagcctgcca cctttatggg catggcgggg ctgggcgatc ttgtgcttac
    35401 ctgtaccgac aaccagtcgc gtaaccgccg ttttggcatg atgctcggtc agggcatgga
    35461 tgtacaaagc gcgcaggaga agattggtca ggtggtggaa ggctaccgca atacgaaaga
    35521 agtccgcgaa ctggcgcatc gcttcggcgt agaaatgcca ataaccgagg aaatttatca
    35581 agtattatat tgcggaaaaa acgcgcgcga ggcagcattg acgttattag gtcgtgcacg
    35641 caaggacgag cgcagcagcc actaacccca gggaaccttt gttaccgcta tgacccggcc
    35701 cgcgcagaac gggccggtca ttatctcatc gtgtggagta agtaatgtcg tgtgaagaac
    35761 tggaaattgt ctggaacaat attaaagccg aagccagaac gctggcggac tgtgagccaa
    35821 tgctggccag tttttaccac gcgacgctac tcaagcacga aaaccttggt agtgcactga
    35881 gctacatgct ggcgaacaag ctgtcatcgc caattatgcc tgctattgct atccgtgaag
    35941 tggtggaaga agcctacgcc gctgacccgg aaatgatcgc ctctgcggcc tgtgatattc
    36001 aggcggtgcg tacccgcgac ccggcagtcg ataaatactc aaccccgttg ttatacctga
    36061 agggttttca tgccttgcag gcctatcgca tcggtcactg gttgtggaat caggggcgtc
    36121 gcgcattggc aatctttctg caaaaccagg tttctgtgac gttccaggtc gatattcacc
    36181 cggcagcaaa aattggccgt ggcattatgc tcgaccacgc cacgggcatc gttgtgggtg
    36241 aaacggcggt aattgaaaac gacgtatcga ttctgcaatc tgtgacgctt ggcggtacgg
    36301 gtaaatctgg tggtgaccgt cacccgaaaa ttcgtgaagg tgtgatgatt ggcgcgggcg
    36361 cgaaaatcct cggcaatatt gaagttggtc gcggcgcgaa gattggcgca ggttccgtgg
    36421 tgctgcaacc ggtgccgccg catacaaccg ccgctggcgt tccggctcgt attgtcggta
    36481 aaccagacag cgataagcca tcaatggata tggaccagca tttcaacggt attaaccata
    36541 catttgagta tggggatggg atctaatgtc ctgtgatcgt gccggatgcg atgtaatcat
    36601 ctatccggca tacagtaact aatctctcaa caacgctccc ggatatccca gctgccgcca
    36661 ggcttcatac accactaccg acaccgcatt ggacagattc atgctgcggc tgtccggcac
    36721 catcggaatg cgaatttttt gttcagcggg cagggcatca agaatgctcg ctggcaggcc
    36781 gcgtgtttcc gggccgaaca tcagataatc gccatcctga tagcttacgg cgctgtgagc
    36841 aggcgtacct ttcgtggtga gggcaaacag gcgctgggga ttttctgctt cgaggaacgc
    36901 gcgatagtca tgatgacgcg taacggcggt aaactcgtga tagtccagcc ccgcgcggcg
    36961 caggcgctta tcgtcccagg caaatcccat cggttcgatg atatgcagac gaaagccggt
    37021 attagcgcaa agacggatga tgttgccagt atttggcgga atttctggtt cgtaaagtac
    37081 gatgtttagc atactgcccc cttagtgcgg gggcaggata gcagaaaatt ggtgaaccgt
    37141 gcggcctttt cccctcaccc cggccctccc cctgtctctt gatcaggaga tctgatcaag
    37201 agacagctcc ctgagggaga gggt
//
LOCUS       DADKRT010000016        36812 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.016, whole genome shotgun sequence.
ACCESSION   DADKRT010000016 DADKRT010000000
VERSION     DADKRT010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 36812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36812
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.016"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            582..668
                     /gene="leuL"
                     /locus_tag="JQ356_000705"
     CDS             582..668
                     /gene="leuL"
                     /locus_tag="JQ356_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HAY4620887.1"
                     /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH"
     gene            761..2332
                     /gene="leuA"
                     /locus_tag="JQ356_000706"
     CDS             761..2332
                     /gene="leuA"
                     /locus_tag="JQ356_000706"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HAY4620888.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN
                     AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
                     LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS
                     LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQHNENNKETV"
     gene            2332..3423
                     /gene="leuB"
                     /locus_tag="JQ356_000707"
     CDS             2332..3423
                     /gene="leuB"
                     /locus_tag="JQ356_000707"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HAY4620889.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD
                     VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
                     FGLYEPAGGSAPDITGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI
                     RTGDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            3426..4826
                     /gene="leuC"
                     /locus_tag="JQ356_000708"
     CDS             3426..4826
                     /gene="leuC"
                     /locus_tag="JQ356_000708"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HAY4620890.1"
                     /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
                     RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
                     VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
                     TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGQVKAQAEAEGLD
                     KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
                     AAAAVTGHFADIRNIK"
     gene            4837..5442
                     /gene="leuD"
                     /locus_tag="JQ356_000709"
     CDS             4837..5442
                     /gene="leuD"
                     /locus_tag="JQ356_000709"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HAY4620891.1"
                     /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
                     RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN"
     gene            complement(5491..6572)
                     /locus_tag="JQ356_000710"
                     /pseudo
     CDS             complement(5491..6572)
                     /locus_tag="JQ356_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025293.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(6673..6804)
                     /gene="sgrT"
                     /locus_tag="JQ356_000711"
     CDS             complement(6673..6804)
                     /gene="sgrT"
                     /locus_tag="JQ356_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HAY4620892.1"
                     /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES"
     gene            6893..8548
                     /locus_tag="JQ356_000712"
     CDS             6893..8548
                     /locus_tag="JQ356_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SgrR"
                     /protein_id="HAY4620893.1"
                     /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
                     NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
                     VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSTLRRSETHIARQIFSSLTRINEE
                     NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA
                     DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN
                     TTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG
                     CYYLLFDSRTHRGANQQVRDWVNYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART
                     IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES
                     DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA
                     SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      8582..8681
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            8712..9695
                     /gene="thiB"
                     /locus_tag="JQ356_000713"
     CDS             8712..9695
                     /gene="thiB"
                     /locus_tag="JQ356_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HAY4620894.1"
                     /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
                     ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
                     STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
                     TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISGWQRAVSR"
     gene            9671..11281
                     /gene="thiP"
                     /locus_tag="JQ356_000714"
     CDS             9671..11281
                     /gene="thiP"
                     /locus_tag="JQ356_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease ThiP"
                     /protein_id="HAY4620895.1"
                     /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
                     AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
                     PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
                     ALENIPDEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
                     GGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQ
                     GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
                     LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
                     LLNNTIGLQQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
                     KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
                     VTALILLLLCFLLFTVIEKLPGRNVKTD"
     gene            11265..11963
                     /gene="thiQ"
                     /locus_tag="JQ356_000715"
     CDS             11265..11963
                     /gene="thiQ"
                     /locus_tag="JQ356_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706019.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein
                     ThiQ"
                     /protein_id="HAY4620896.1"
                     /translation="MLKLTDITWLYQHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
                     IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL
                     NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
                     DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELL
                     SGKASASAILGITG"
     gene            complement(12076..12840)
                     /locus_tag="JQ356_000716"
     CDS             complement(12076..12840)
                     /locus_tag="JQ356_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY4620897.1"
                     /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
                     HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI
                     LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
                     WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV"
     gene            complement(12926..13804)
                     /gene="araC"
                     /locus_tag="JQ356_000717"
     CDS             complement(12926..13804)
                     /gene="araC"
                     /locus_tag="JQ356_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HAY4620898.1"
                     /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
                     YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA
                     YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL
                     LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ
                     LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
                     RAGCEEKVNDVAVKLS"
     gene            14143..15843
                     /gene="araB"
                     /locus_tag="JQ356_000718"
     CDS             14143..15843
                     /gene="araB"
                     /locus_tag="JQ356_000718"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HAY4620899.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
                     APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL
                     ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
                     PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
                     MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
                     QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
                     VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI
                     AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
                     SAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
                     "
     gene            15854..17356
                     /gene="araA"
                     /locus_tag="JQ356_000719"
     CDS             15854..17356
                     /gene="araA"
                     /locus_tag="JQ356_000719"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HAY4620900.1"
                     /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL
                     PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ
                     FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI
                     GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
                     NSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFT
                     TTFEDLHGLKQLPGLAVQHLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
                     YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI
                     VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH
                     TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR"
     gene            17556..18240
                     /gene="araD"
                     /locus_tag="JQ356_000720"
                     /pseudo
     CDS             17556..18240
                     /gene="araD"
                     /locus_tag="JQ356_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124519.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
     gene            18315..20666
                     /gene="polB"
                     /locus_tag="JQ356_000721"
     CDS             18315..20666
                     /gene="polB"
                     /locus_tag="JQ356_000721"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HAY4620901.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
                     IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
                     VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
                     RHGELYCIGLEGCGQRIVYMLGSENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD
                     VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID
                     GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
                     DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
                     EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG
                     RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG
                     DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL
                     VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
                     DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
     gene            20830..23736
                     /gene="rapA"
                     /locus_tag="JQ356_000722"
     CDS             20830..23736
                     /gene="rapA"
                     /locus_tag="JQ356_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HAY4620902.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
                     LVVDEAHHLVWSEDAPSREYQAIEQLAEHMPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
                     SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE
                     QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLLDIIGINQDDRGDNMIVL
                     TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
                     SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ"
     gene            23748..24407
                     /gene="rluA"
                     /locus_tag="JQ356_000723"
     CDS             23748..24407
                     /gene="rluA"
                     /locus_tag="JQ356_000723"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HAY4620903.1"
                     /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD
                     SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD
                     F"
     gene            complement(24524..25339)
                     /gene="djlA"
                     /locus_tag="JQ356_000724"
     CDS             complement(24524..25339)
                     /gene="djlA"
                     /locus_tag="JQ356_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HAY4620904.1"
                     /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR
                     VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE
                     LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
                     TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
     gene            25594..27948
                     /gene="lptD"
                     /locus_tag="JQ356_000725"
     CDS             25594..27948
                     /gene="lptD"
                     /locus_tag="JQ356_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HAY4620905.1"
                     /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
                     GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKV
                     SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
                     QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
                     AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL
                     EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
                     YDDAAVEHFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG
                     GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI
                     SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
                     NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL"
     gene            28001..29287
                     /gene="surA"
                     /locus_tag="JQ356_000726"
     CDS             28001..29287
                     /gene="surA"
                     /locus_tag="JQ356_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HAY4620906.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
                     IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
                     AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA
                     HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
                     SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS
                     ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
                     QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
     gene            29287..30276
                     /gene="pdxA"
                     /locus_tag="JQ356_000727"
     CDS             29287..30276
                     /gene="pdxA"
                     /locus_tag="JQ356_000727"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HAY4620907.1"
                     /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
                     DRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAIENGHYVVETLA
                     RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV
                     ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
                     GTEEIDTIIPVLDELRAQGMILNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
                     GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
     gene            30273..31094
                     /gene="rsmA"
                     /locus_tag="JQ356_000728"
     CDS             30273..31094
                     /gene="rsmA"
                     /locus_tag="JQ356_000728"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HAY4620908.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
                     KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES"
     gene            31097..31474
                     /gene="apaG"
                     /locus_tag="JQ356_000729"
     CDS             31097..31474
                     /gene="apaG"
                     /locus_tag="JQ356_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HAY4620909.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
                     DENGVPFSIDIPVFRLAVPTLIH"
     gene            31481..32323
                     /gene="apaH"
                     /locus_tag="JQ356_000730"
     CDS             31481..32323
                     /gene="apaH"
                     /locus_tag="JQ356_000730"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase
                     (symmetrical)"
                     /protein_id="HAY4620910.1"
                     /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
                     SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
                     EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE
                     AAAS"
     gene            complement(32401..32880)
                     /gene="folA"
                     /locus_tag="JQ356_000731"
     CDS             complement(32401..32880)
                     /gene="folA"
                     /locus_tag="JQ356_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HAY4620911.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
                     HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(33072..34934)
                     /gene="kefC"
                     /locus_tag="JQ356_000732"
     CDS             complement(33072..34934)
                     /gene="kefC"
                     /locus_tag="JQ356_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HAY4620912.1"
                     /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
                     LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
                     PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
                     FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
                     FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
                     GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
                     DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
                     TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
                     AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
                     ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
     gene            complement(34927..35457)
                     /gene="kefF"
                     /locus_tag="JQ356_000733"
     CDS             complement(34927..35457)
                     /gene="kefF"
                     /locus_tag="JQ356_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HAY4620913.1"
                     /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
                     DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGKALHGKHLLW
                     AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
                     RHYKQRLLEWQEAHHG"
     gene            complement(35539..>36812)
                     /locus_tag="JQ356_000734"
     CDS             complement(35539..>36812)
                     /locus_tag="JQ356_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005116114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4620914.1"
                     /translation="DGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLF
                     GYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMI
                     TEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIG
                     RFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLF
                     VAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNT
                     AGRRPLLIGSFAMMTLELAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELF
                     PTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFA
                     PETSRDVIGANQQYDDPRAENGVNCSDFSLF"
BASE COUNT         8958 a        10077 c         9684 g         8093 t
ORIGIN      
        1 tgcatataaa ataagaaaaa gcaaaatgag taaaattcgg aaaacataaa gatacgggtt
       61 ctgataaaaa cagaatccat tgccgtggaa tgagtcattt accacagcat aataatccat
      121 aatgtttttg ttgcgaaaac aatctaatca taactaccgc gaatactcaa tcatctacaa
      181 aatggattaa atgtgcttat ttaataatta atttatatat ttaatgcatt aattattaac
      241 attaatggat caataatatt caccatatca atatcaaaaa aaattcgcaa aacatataat
      301 tcaatacaaa tcatcaggat aggttttgca acgcgtgcat tttgtcccct ttttcctcgt
      361 tgattagatg caaaaattta ttctgaaata tgtcaaccta tgaaaagtgt cggtcgttaa
      421 acagaaatta atatcgcttg ctttaaccac cgcagcacaa ttagctaatt ttacggatgc
      481 agaactcgcg ctggcgggac gtttttattg cgtcagggtt gacatccgtt tttgtatcca
      541 gtaactctaa aagcatatcg cattcatctg gagctgattt aatgactcac atcgttcgct
      601 ttatcggtct actactacta aacgcatctt ctttgcgcgg tagacgagtg agcggcatcc
      661 agcattaagc cagcacgcag tcaaacaaaa aacccgcgcc attgcgcggg tttttttatg
      721 cccgaagcga ggcgctctaa aagagacaag gacccaaacc atgagccagc aagtcattat
      781 tttcgatacc acattgcgcg acggtgaaca ggcgttacag gcaagcttga gtgtgaaaga
      841 aaaactgcaa attgcgctgg cccttgagcg tatgggtgtt gacgtgatgg aagtcggttt
      901 ccccgtctct tcgccgggcg attttgaatc agtgcaaacc atcgcccgcc aggttaaaaa
      961 cagccgcgta tgcgcgttag ctcgctgcgt ggagaaagat atcgacgtgg cggccgaatc
     1021 cctgaaagtc gccgaagcct tccgtattca tacctttatt gccacttcgc caatgcacat
     1081 cgccaccaag ctgcgcagca cgctggatga agtgatcgaa cgcgctatct atatggtgaa
     1141 acgcgcccgt aattacaccg atgatgttga attttcttgc gaagatgccg ggcgtacccc
     1201 cattgccgat ctggcgcgag tggtcgaagc ggcgattaat gccggtgcca ccaccatcaa
     1261 cattccggac accgtgggct acaccatgcc gtttgagttc gccggaatca tcagcggtct
     1321 gtatgaacgc gtacctaaca tcgacaaagc cattatttcc gtacataccc acgacgattt
     1381 aggcctggcg gtcggcaact cactggcggc ggtacatgcc ggtgcacgcc aggtggaagg
     1441 tgcaatgaac gggatcggcg agcgtgccgg taactgttcg ctggaagaag tcatcatggc
     1501 gattaaagtt cgtaaggata ttctcaacgt ccacaccgcc attaatcacc aggagatatg
     1561 gcgcaccagc cagttagtta gccagatttg taatatgccg atcccggcaa acaaagccat
     1621 tgttggcagc ggcgcattcg cccactcctc cggtatccac caggatggcg tgctgaaaaa
     1681 ccgcgaaaac tacgaaatca tgacaccaga atctattggt ctgaaccaaa tccagctgaa
     1741 tctgacctct cgttcggggc gtgcggcggt gaaacatcgc atggatgaga tggggtataa
     1801 agaaagtgaa tataatttag acaatttgta cgatgctttc ctgaagctgg cggacaaaaa
     1861 aggtcaggtg tttgattacg atctggaggc gctggccttc atcggtaagc agcaagaaga
     1921 gccggagcat ttccgtctgg attacttcag cgtgcagtct ggctctaacg atatcgccac
     1981 cgccgccgtc aaactggcct gtggcgaaga agtcaaagca gaagccgcca acggtaacgg
     2041 tccggtcgat gccgtctatc aggcaattaa ccgcatcact gactataacg tcgaactggt
     2101 gaaatacagc ctgaccgcca aaggtcacgg taaagatgcg ctgggtcagg tggatattgt
     2161 cgccaactac aacggtcgcc gcttccacgg cgtcggcctg gccaccgata ttgtcgagtc
     2221 ctccgccaaa gccatggtgc acgtactgaa caatatctgg cgtgccgcag aagtcgaaaa
     2281 agagttgcaa cgcaaagctc aacacaacga aaacaacaag gaaaccgtgt gatgtcgaag
     2341 aattaccata ttgccgtatt gccgggggac ggtattggtc cggaagtgat gacccaggcg
     2401 ctgaaagtgc tggatgccgt gcgcaaccgc tttgcgatgc gcatcaccac cagccattac
     2461 gatgtaggcg gcgcagccat tgataaccac gggcaaccac tgccgcctgc gacggttgaa
     2521 ggttgtgagc aagccgatgc cgtgctgttt ggctcggtag gcggtccgaa atgggaacat
     2581 ttaccaccag accagcaacc agaacgcggc gcgctgttgc ctttgcgtaa gcacttcaaa
     2641 ttattcagca acctgcgtcc ggcaaaactg tatcaggggc tggaagcatt ctgtccgctg
     2701 cgtgctgaca ttgccgctaa cggcttcgac atcctgtgcg tgcgcgaact gaccggcggc
     2761 atctatttcg gtcagccaaa aggccgcgaa ggtagcggac agtatgaaaa agcgtttgat
     2821 accgaggtgt atcaccgttt tgagatcgaa cgtatcgccc gcatcgcgtt tgaatctgcc
     2881 cgcaagcgtc gccacaaagt cacctcaatc gacaaagcca acgtgctgca atcctctatt
     2941 ttatggcggg agatcgttaa cgagatcgcc acggaatacc cggatgtcga actggcgcat
     3001 atgtacatcg acaacgccac catgcagctg attaaagatc catcacagtt tgacgtcctg
     3061 ctgtgctcca acctgtttgg cgacattctg tctgacgagt gcgcaatgat cactggctcg
     3121 atggggatgt tgccttccgc cagcctgaac gagcaaggtt ttggtctgta tgaaccggca
     3181 ggcggctcag caccagatat cacaggcaaa aacatcgcca acccgattgc gcaaattctg
     3241 tcgctggcac tgctgctgcg ctacagcctg gatgccgatg atgcggcttg cgccattgaa
     3301 cgcgccatta accgcgcatt agaagaaggc attcgcaccg gggatttagc ccgtggcgct
     3361 gccgccgtta gtaccgatga aatgggcgat atcattgccc gctatgtggc agaaggggtg
     3421 taatcatggc taaaacgtta tacgaaaaat tattcgacgc tcacgtagtg tacgaagccg
     3481 aaaacgaaac cccgctgtta tatatcgacc gccacctggt gcatgaagtg acctcaccgc
     3541 aggcgttcga tggtctgcgc gcccacggtc gcccggtacg tcagccgggc aaaaccttcg
     3601 ccactatgga tcacaacgtc tctacccaga cgaaagacat taatgcctgt ggtgaaatgg
     3661 cgcgcatcca gatgcaggag ctgattaaaa actgcaaaga atttggcgtc gaactgtatg
     3721 acctgaatca cccgtatcag gggatcgtcc acgtaatggg gccggaacag ggcgtcacct
     3781 tgccggggat gaccattgtc tgcggcgact cgcataccgc cacccacggc gcgtttggcg
     3841 cactggcctt tggtatcggc acttccgaag ttgaacacgt actggcaacg caaaccctga
     3901 aacagggccg cgcaaaaacc atgaaaattg aagtccaggg caaagccgcg ccgggcatta
     3961 ccgcaaaaga tatcgtgctg gcaattatcg gtaaaaccgg tagcgcaggc ggcaccgggc
     4021 atgtggtgga gttttgcggc gaagcaatcc gtgatttaag catggaaggt cgtatgaccc
     4081 tgtgcaatat ggcaatcgaa atgggcgcaa aagccggtct ggttgcaccg gacgaaacca
     4141 cctttaacta tgtcaaaggc cgtttgcatg cgccgaaagg caaagatttc gacgacgccg
     4201 ttgcctactg gaaaaccctg caaaccgacg aaggcgcaac tttcgatacc gttgtcactc
     4261 tgcaagcaga agaaatttca ccgcaggtca cctggggcac caatccaggc caggtgattt
     4321 ccgtgaacga caatattccc gatccggctt cgtttgccga tccggttgaa cgcgcgtcgg
     4381 cagaaaaagc gctggcctat atggggctga aaccgggcat tccgctgacc gaagtggcta
     4441 tcgacaaagt gtttatcggt tcctgtacca actcgcgcat tgaagattta cgcgcggcag
     4501 cggagatcgc caaagggcga aaagtcgcgc caggcgtgca ggcactggtg gttcccggct
     4561 ctggccaggt aaaagcccag gcggaagcgg aaggtctgga taaaatcttt attgaagccg
     4621 gttttgaatg gcgcttgcct ggctgctcaa tgtgtctggc gatgaacaac gaccgtctga
     4681 atccgggcga acgttgtgca tccaccagca accgtaactt tgaaggccgc caggggcgcg
     4741 gcgggcgcac gcatctggtc agcccggcaa tggctgccgc tgctgctgtg accggacatt
     4801 tcgccgacat tcgcaacatt aaataaggag cagaccatgg cagagaaatt tatcaaacac
     4861 acaggcctgg tggttccgct ggatgccgcc aatgtcgata ccgatgcaat catcccgaaa
     4921 cagtttttgc agaaagtgac ccgtacgggt tttggcgcgc atctgtttaa cgactggcgt
     4981 tttctcgatg aaaaaggcca acagccaaac ccggacttcg tgctgaactt cccgcagtat
     5041 cagggcgctt ccattttgct ggcacgagaa aacttcggct gtggctcctc gcgtgagcac
     5101 gcgccctggg cattgaccga ctacggtttt aaagtggtga ttgcgccgag ttttgctgac
     5161 atcttctacg gcaatagctt taacaaccag ctgctgccgg tgaaattaag cgatgcagaa
     5221 gtggacgaac tgtttgcgct ggtgaaagcc aatccgggga tccatttcga cgtggatctg
     5281 gaagcgcaag aggtgaaagc gggagagaaa acctatcgct ttaccatcga tgccttccgc
     5341 cgccactgca tgatgaacgg tctggacagt attgggctta ccttgcagca cgacgacgcc
     5401 attgccgctt atgaagcaaa acaacctgcg tttatgaatt aatccccttg cccggtcaaa
     5461 tgaccgggct ttccgctatc gtccacgtca tcaaacgtct ttaacctttg cggttaaaaa
     5521 taatgcgaca acagaaataa ccgcaattac ccagtagaca gcaaagtgcc cccaactttg
     5581 tgcaattgct ccctgaataa cgccagccag aattaccccg gtagaaatac tgttagtaaa
     5641 taaggtggta gctgccccgc tcttccaggc attaaatcct gaaaccatag catcccaata
     5701 cccgcaacaa tgccgataaa tacagcgtta aaaagttgca gcgtcatcaa cgccatacgg
     5761 ctatgaaaga aaatcaatcc ggtgtaaaac agtactcctg ccgccactgc tatgaccatc
     5821 attcgccgct taccataacg tttgacatag tagccagcca gaatcattgc tggtatttcc
     5881 agtccagctg ccgtccccat caggaaaccc gccagtttgt ctggcaatcc taactcgcta
     5941 ctgatccaca acggcatatc aataatgtac atggtgttgc aggtccacat taacgtcgag
     6001 gcgacaaata acatccgtac gttactatcc tgccagccac cttgcattga taaagcattt
     6061 tccgacggca gttctacccg cgccacagac ggaagcataa atgcaatcaa taccagactg
     6121 agtgtgaata tcccggcggc aatcgaaaac atcaccactt ctcgcgccga gttatcctca
     6181 tattcccgcg ccagagcaaa taactgtggc attgccgtat tggccagaga tgccagaagc
     6241 acaccacagg tgataagcgt cagataatga cgattaaatg caaacaatgg cgcattgccg
     6301 atagccatca aacagcaaaa tataatcagt tttcgccgat cgccctgact gtcagaacgt
     6361 tttgccaacc agaggcttac gccgatccca gcaatagtat tcaccgtata aaagagtccg
     6421 atccagaaag gttgcgcgcc aacctcacga ctcagaaata agctcaatgt aggagcctgt
     6481 agcgccccgg ccacccccat cataaaagcg accagcataa atgccgcgta aacaccgttc
     6541 atacggcgag ccatcgtcat tatccagatc atacgttccc tttttagcgc ggcgagaata
     6601 aaaaaaccag caggtataat ctgctggcgg gtgattttac accaatactc agtcacacat
     6661 gatgcaggca agtcaacttt cagaattgcg gtcatcccac tgcatcagtc cttcaagcat
     6721 ggttaatcgt tgtgggacgc ttaaccaacg caaccagcac aacttcgctg tcgcggtaaa
     6781 atagtgctga taaaactgac gcatggggca cctccttgct tcatcgttag gaattattga
     6841 cttaatatag ggaaaataaa attgctgtct tttgcgcagg agttcccctt ttatgccatc
     6901 tgctcgtctg caacaacagt tcatccgcct gtggcaatgc tgcgagggta aatcgcagga
     6961 cacaacgctc aacgaactgg cagcgttatt gagctgctcg cgtcgtcata tgcgtaccct
     7021 gctcaacacc atgcaggatc gcggctggct gacgtgggaa gcggaagtcg ggcgcggtaa
     7081 acgctcgcgt ctgacattcc tctataccgg gctggcgctt cagcaacagc gggcggaaga
     7141 cctgctggag caggatcgta tcgaccaact agtgcagttg gttggcgaca aagcgactgt
     7201 gcggcaaatg ctggtttctc atctgggccg cagcttccgc caggggcggc acatcctgcg
     7261 cgtgctctac tatcgtccgt tgcgtaatct gctacctggc agcacattgc gccgttccga
     7321 aacccatatt gcccggcaaa tcttcagttc gctaacgcgc ataaatgagg aaaatgggga
     7381 actggaagca gacatcgccc accactggca gcaaatatca ccgcttcact ggcgtttctt
     7441 tttgcgtcca ggagtccatt ttcatcatgg tcgtgaactg gaaatggacg acgtgatcgc
     7501 ctctttaaaa cgaatcaata cgctgccgct ctattcgcat attgcggaca ttgtgtcgcc
     7561 gacgccctgg acgctggata tccatctcac gcaaccggac cgctggttac cgttactgct
     7621 ggggcaagtt ccggcgatga tcctgccgcg cgaatgggaa accctcagta actttgccag
     7681 ccatcccatc ggcaccggtc cgtatgcggt gatccgcaac accaccaatc aactgaaaat
     7741 tcaggcattc gatgacttct tcggttaccg ggcattaatc gatgaagtta acgtctgggt
     7801 tctgccggaa attgccgacg agccagctgg aggtctgatg ctaaaaggtc cacagggtga
     7861 ggaaaaagag attgaaagcc gcctggagga aggttgctac tatttactat tcgacagccg
     7921 cacccatcgc ggagcgaatc agcaagtcag ggactgggta aactatgtgc tttctccaac
     7981 taatctggtc tatttcgctg aggaacagta ccagcaactg tggttcccgg cttatggact
     8041 gctcccccgt tggcaccatg cccgcaccat aaagagcgaa aaaccggctg gcctggaaag
     8101 cctcaccctg accttttatc aggatcacag tgagcatcgg gtgattgccg ggatcatgca
     8161 gcagattctg gcaagtcacc aggtcacgct ggaaatcaaa gagatcagct acgatcagtg
     8221 gcatgaagga gagatcgaga gcgatatctg gcttaatagc gccaacttta cgctgccgct
     8281 ggatttttcg ctgttcgcgc acttgtgcga ggtgccgctg ctccaacact gtattccgat
     8341 cgactggcaa gccgacgccg cccgctggcg caatggcgaa atgaacctgg cgaactggtg
     8401 ccagcaactg gtcgccagta aagcaatggt gccgcttatc caccactggc tgatcattca
     8461 gggacaacgc agtatgcgcg gcctgcgtat gaataccctc ggctggttcg attttaaatc
     8521 agcgtggttt gcgccgccgg atccatgatt gctggtagat aacaaaatca ctacactaac
     8581 gccgttctca acggggtgcc acgcaaacgc gtgcgctgag aaaatacccg tcgaacctga
     8641 tccggataac gccggcgaag ggatttgagg ctccttctca agtcctttgc cactcttttt
     8701 tgaggtgcaa agtgttaaaa aaatgtcttc ccctgctgtt gctgtgcaca gcgcccgttt
     8761 tcgctaaacc cgttctgact gtttatacct acgattcctt cgccgccgac tgggggcctg
     8821 gtccaaagat caaaaaagct tttgaagccg actgtaactg cgaactgaaa ctggtggcgc
     8881 tggaagatgg cgtttcgctt ctcaaccgtc tacggatgga aggcaaaaat agtaaagccg
     8941 atgtggtgct ggggctggat aacaatctgt tagacgccgc cagtaaaacc ggactatttg
     9001 ccaaaagcgg tgtggcagcg gatgccgtta acgttcccgg cggctggaat aatgacactt
     9061 tcgtcccgtt tgattacggc tatttcgcct tcgtctatga caagaacaaa ctgaaaaacc
     9121 cgccgcaaag cctgaaagaa ttggttgaga gcgatcaaaa ctggcgggtg atttatcagg
     9181 atccgcgcac cagtacgccg gggctgggcc tgctgttgtg gatgcaaaaa gtctatggcg
     9241 atgacgcccc acaagcctgg caaaaactgg cgaagaaaac cgtcacggtc accaaaggct
     9301 ggagcgaagc ctacggcctg tttttaaaag gtgaaagcga tctggtactg agttacacca
     9361 cctctccggc ttatcacatt ctcgaagaga aaaaagataa ctacgccgcc gcgaacttta
     9421 gcgaaggtca ctatctgcag gtggaagtcg ccgcccgcac cgctgccagc aagcagccgg
     9481 agctggcgca aaaattcctc cagtttatgg tttctccggc ttttcagaat gcgatcccaa
     9541 ccggtaactg gatgtatccg gtggcaaatg tcacgctgcc tgccgggttt gaacaattga
     9601 ccaaaccggc caccacgctg gagttcacac cagctgaagt ggcggcacaa cgtcaggcat
     9661 ggattagcgg atggcaacgc gccgtcagcc gttaattccc ggctggttaa ttccaggtgt
     9721 aagcgccgcc acgctggtgg tagcggttgc gctcgcggcg tttctcgccc tgtggtggaa
     9781 cgcgccgcag ggtaactggg tggcagtctg gcaggacagc tacctgtggc atgtggtgcg
     9841 cttctccttc tggcaggcgt ttctctcggc gctactctct gtcgtacccg cgatattcct
     9901 cgcccgcgcc ctctatcgca ggcgctttcc gggtcggctg gcgctgttgc gtctgtgcgc
     9961 aatgaccttg atcctcccgg tgctggttgc tgttttcggc attcttagcg tctatggtcg
    10021 ccagggctgg ctggcatcgc tctgccaatc gctcggtctg gagtggacct tttcgcccta
    10081 cggcctgcaa ggtattttgc tggcgcacgt attttttaat ctgccgatgg cgagccgctt
    10141 attactccag gcactggaaa acattcccga cgaacaacgt cagcttgccg cccagcttgg
    10201 gatgcgcggc tggcattttt tccgcttcgt cgaatggccg tggttacggc gacaaatccc
    10261 gccggttgct gcacttatct ttatgctctg tttcgccagc ttcgccaccg tgctatcact
    10321 gggcggcggt ccgcaggcga ccactatcga gctggctatt tatcaggcgc tgagttacga
    10381 ctacgatcct gcccgcgcgg cgatgctggc gctgatccag atggtgtgtt gccttgggct
    10441 ggtactgttg agtcagcgat tgagtaaggc cattgcgcca ggcaccacgc tgctgcaagg
    10501 ctggcgcgac ccggacgatc gtctgcatag ccgcatttgc gacacggtgt taatagtgct
    10561 ggcgttgctg ctgttgttgc caccgttgct ggcggtgatc gtcgatgggg taaatcgcca
    10621 gttgccggaa gtgctggcac aaccggtgct gtggcaggcg ctgtggacct cgttgcgtat
    10681 tgcgctggcg gcaggtgtat tgtgcgtagt gctgaccatg atgctgctat ggagcagtcg
    10741 cgaacttcgg gcacggcaga aaatgctggc gggtcaggcg ctggagatga gcggcatgtt
    10801 gattctcgcc atgccgggga ttgtgctggc taccggcttc tttttactgc tcaacaacac
    10861 tatcggcctg caacaatctg ctgacggcat tgtgattttc accaatgcgt taatggcgat
    10921 cccttatgcg ctgaaagtac tggaaaaccc gatgcgcgat atcaccgccc gctacagtat
    10981 gttgtgtcag tcgctgggca ttgaaggctg gtcgcgctta aaagtggtgg agctgcgcgc
    11041 cctgaaacgt ccactggcgc aggcgctggc ctttgcctgc gtgctgtcga ttggtgattt
    11101 tggcgtggtg gcgttgttcg gtaacgatga tttccgtacc ctgccgtttt atctctacca
    11161 gcaaattggc tcctatcgca gccaggacgg cgcggtcacc gcgttaattc tgctgctact
    11221 ctgttttctg ctgtttaccg tgattgaaaa actaccgggg cgaaatgtta aaactgactg
    11281 atatcacctg gctttaccaa catttgccga tgcgttttag cttaacggtg gaacgcggcg
    11341 agcaggtggc gatcctcggg ccaagcggcg caggtaaaag taccctgctg aatttgattg
    11401 ccggttttct gacgccagcc agcggttcgc tgactatcga tggcgttgat cacaccacga
    11461 cgccgccgtc acgccgtccg gtgtcgatgc tgtttcagga gaacaacctg ttcagccacc
    11521 tgacggtcgc gcagaacatc gggctggggc ttaatccagg attgaagctg aacgcggcac
    11581 agcaggagaa aatgcacgct atcgcccgtc agatggggat tgataattta atggcgcggt
    11641 taccgggcga gctttccggc ggccagcgac agcgcgtggc gttagcgcgt tgtctggtgc
    11701 gcgaacagcc gattttattg ctcgatgaac cgttctctgc gctcgatccg gcgttacgtc
    11761 aggagatgct gacgctggtg agcacgagct gccagcagca aaaaatgacg ctattgatgg
    11821 tgtcgcacag tgtggaagat gcggcgcgga tcgccacacg ctcggtggtg gtcgccgacg
    11881 ggcgcatcgc ctggcagggt aagactgaag aattgttgag cggtaaggcg agtgcttcgg
    11941 caatattggg gattacgggt tagtatgcac tgtcagatgc agcgtgaaca ccttatccga
    12001 cctacggaca gtgcgttttg taggcctgat aagaccggtc agcgtcgcat caggcaaccc
    12061 gcacaagaca atcccctaaa ccccaaccac tttacgcaaa atatcgatat acaccggcat
    12121 caacgggtgg cgaattaaca ccaccagcgc caccacgccg atggcagaaa tcaacggcgt
    12181 cagccacaac aaacggccgc gcgacaaata atgacttaaa cgatcggttg ctttaccgct
    12241 gcgccataac cgccagcaca gccagccacc aacccacaaa aataccgccg tcgccagcag
    12301 caaccattta aactcgccgc tctgcattcc ggctggaata tcgatcgccg cgcccgccag
    12361 aatcccaggc aggaagtaaa acggtggcca cagcaggcag ccgataatat tcggcgtaat
    12421 gaattttgcc accggcagat ccagcattcc cgccaccatt ggcaccagcg gacgcgtcgg
    12481 gccaacaaag cgaccgacca gaatggtgaa catgctgtgt tgatgcaacg catgttcagt
    12541 tttatcgagt aatgctttgt ttttcttcag aaatgaccag cgatgcaacg gctttttaaa
    12601 acgccagccc agccagaagg agatccagtc gcccagcaga caaccgacaa tccctgccag
    12661 ccaggcgtgc cagaaactta actcgccgct gccaatcagc gctcccagcc ccgccatcag
    12721 caccgtaccg ggtagaatca aaccgaccag cgccagcgac tccagaaagg ccaccaacac
    12781 caccgccatc aatgaataca cggtagattg ggtaataaag tgttccagca atgcttgcat
    12841 aatgtgcctg tcaaatggac gaagcaggga ttctgcaaac cctatgctac tccgtcaagc
    12901 cgtcaattgt ctgattcgtt accaattatg acaacttgac ggctacatca ttcacttttt
    12961 cttcacaacc ggcacggaac tcgctcgggc tggccccggt gcatttttta aatacccgcg
    13021 agaaatagag ttgatcgtca aaaccaacat tgcgaccgac ggtggcgata ggcatccggg
    13081 tggtgctcaa aagcagcttc gcctggctga tacgttggtc ctcgcgccag cttaagacgc
    13141 taatccctaa ctgctggcgg aaaagatgtg acagacgcga cggcgacaag caaacatgct
    13201 gtgcgacgct ggcgatatca aaattgctgt ctgccaggtg atcgctgatg tactgacaag
    13261 cctcgcgtac ccgattatcc atcggtggat ggagcgactc gttaatcgct tccatgcgcc
    13321 gcagtaacaa ttgctcaagc agatttatcg ccagcagctc cgaatagcgc ccttcccctt
    13381 gcccggcgtt aatgatttgc ccaaacaggt cgctgaaatg cggctggtgc gcttcatccg
    13441 ggcgaaagaa acccgtattg gcaaatattg acggccagtt aagccattca tgccaatagg
    13501 cgcgcggacg aaagtaaacc cactggtgat accattcgcg agcctccgga tgacgaccgt
    13561 agtgatgaat ctctcctggc gggaacagca aaatatcacc cggtcggcaa acaaattctc
    13621 gtccctgatt tttcaccacc ccctgaccgc gaatggtgag attgagaata taacctttca
    13681 ttcccagcgg tcggtcgata aaaaaatcga gataaccgtt ggcctcaatc ggcgttaaac
    13741 ccgccaccag atgggcatta aacgagtatc ccggcagcag gggatcattt tgcgcttcag
    13801 ccatactttt catactcccg ccattcagag aagaaaccaa ttgtccatat tgcatcagac
    13861 attgccgtca ctgcgtcttt tactggctct tctcgctaac ccaaccggta accccgctta
    13921 ttaaaagcat tctgtaacaa agcgggacca aagccatgac aaaaacgcgt aacaaaagtg
    13981 tctataatca cggcagaaaa gtccacattg attatttgca cggcgtcaca ctttgctatt
    14041 ccatagcatt tttatccata agattagcgg atcctacctg acgcttttta tcgcaactct
    14101 ctactgtttc tccatacccg tttttttgga tggagtgaaa cgatggcgat tgcaattggc
    14161 ctcgattttg gcagtgattc tgtgcgagct ttggcggtgg actgcgccag cggtgaagag
    14221 atcgccacca gcgtagagtg gtatccccgt tggcaaaaag ggcaattttg tgatgccccg
    14281 aataaccagt tccgtcatca tccgcgtgac tacattgagt caatggaagc ggcactgaaa
    14341 accgtgcttg cagagcttag cgtcgaacag cgcgcagctg tggtcgggat tggcgttgac
    14401 agtaccggct cgacgcccgc accgattgat gccgacggta acgtgctggc gctgcgcccg
    14461 gagtttgccg aaaacccaaa cgcgatgttc gtattgtgga aagaccacac tgcggttgaa
    14521 gaagcggaag agattacccg tttgtgccac gcgccgggca acgttgacta ctcccgctac
    14581 attggtggta tttattccag cgaatggttc tgggcaaaaa tcctgcatgt gactcgccag
    14641 gacagcgccg tggcgcaatc tgccgcatcg tggattgagc tgtgcgactg ggtgccagct
    14701 ctgctttccg gtaccacccg cccgcaggat attcgtcgcg gacgttgcag cgccgggcat
    14761 aaatctctgt ggcacgaaag ctggggcggc ttgccgccag ccagtttctt tgatgagctg
    14821 gacccgatcc tcaatcgcca tttgccttcc ccgctgttca ctgacacctg gactgccgat
    14881 attccggtgg gcaccttatg cccggaatgg gcgcagcgtc tcggcctgcc tgaaagcgtg
    14941 gtgatttccg gcggcgcgtt tgactgccat atgggcgcag ttggcgcagg cgcacagcct
    15001 aacgcactgg taaaagttat cggtacttcc acctgcgaca ttctgattgc cgacaaacag
    15061 agcgttggcg agcgggcagt taaaggtatt tgcggtcagg ttgatggcag cgtggtacct
    15121 ggatttatcg gtctggaagc aggccaatcg gcgtttggtg atatctacgc ctggtttggt
    15181 cgcgtactcg gctggccgct ggaacagctt gccgcccagc atccggaact gaaagcgcaa
    15241 atcaacgcca gccagaaaca actgcttccg gcgctgaccg aagcatgggc caaaaatccg
    15301 tctctggatc acctgccggt ggtgctcgac tggtttaacg gccgccgcac accgaacgct
    15361 aaccaacgcc tgaaaggggt gattaccgat cttaacctcg ctaccgacgc tccgctgctg
    15421 tttggcggtt tgattgctgc caccgccttt ggcgcacgcg caatcatgga gtgctttacc
    15481 gatcagggga tcgccgtcaa taacgtgatg gcgctgggcg gcatcgcgcg gaaaaaccag
    15541 gtcattatgc aggcctgctg cgacgtgctg aatcgcccgc tgcaaattgt tgcctctgac
    15601 cagtgctgtg cgctcggtgc ggcgattttt gctgccgtcg ccgcgaaagt gcacgcagac
    15661 atcccatcag cccagcaaaa aatggccagt gcggtagaga aaaccctgca accgcgcagc
    15721 gaacagacac aacgctttga acagctttat cgccgctatc agcaatgggc gatgagcgcc
    15781 gaacaacact atcttccaac ttccgccccg gcacaggctg cccaggccgt tccgactcta
    15841 taaggacacg ataatgacga tttttgataa ttatgaagtg tggtttgtca ttggcagcca
    15901 gcatctgtat ggcccggaaa ccctgcgtca ggtcacccaa catgccgagc acgttgttaa
    15961 tgcgctgaat acggaagcga aactgccctg caaactggtg ttgaaaccgc tgggcaccac
    16021 gccggatgaa atcaccgcta tttgccgcga cgcgaattac gacgatcgtt gcgctggtct
    16081 ggtggtgtgg ctgcacacct tctccccggc caaaatgtgg atcaacggcc tgaccatgct
    16141 caacaaaccg ttgctgcaat tccacaccca gtttaacgcg gcgctgccgt gggacagtat
    16201 cgatatggac tttatgaacc tgaaccagac tgcacatggc ggtcgcgagt tcggcttcat
    16261 tggcgcgcgt atgcgtcagc aacatgccgt ggttaccggt cactggcagg ataaacaagc
    16321 ccatgagcgt atcggctcct ggatgcgtca ggcggtctct aaacaggata cccgtcatct
    16381 gaaagtctgc cgttttggcg ataacatgcg tgaagtagcg gtcaccgatg gtgataaagt
    16441 tgccgcacag atcaagttcg gtttctccgt caatacctgg gcggttggcg atctggtgca
    16501 ggtggtgaac tccatcagcg acggcgatgt taacgcgctg gtcgatgagt acgaaagctg
    16561 ctacaccatg acgcctgcca cacaaatcca cggcgaaaaa cgacagaacg tgctggaagc
    16621 ggcgcgtatt gagctgggga tgaagcgttt cctggaacaa ggtggcttcc acgcgttcac
    16681 caccaccttt gaagatttgc acggtctgaa acagcttcca ggtctggccg tacagcatct
    16741 gatgcagcag ggttacggct ttgcgggcga aggcgactgg aaaaccgccg ccctgcttcg
    16801 catcatgaag gtgatgtcaa ccggtctgca gggcggcacc tcctttatgg aggactacac
    16861 ctatcacttc gagaaaggta atgacctggt gctcggctcc catatgctgg aagtctgccc
    16921 gtcgattgcc gtagaagaga aaccgatcct cgacgttcag catctcggta ttggtggtaa
    16981 ggacgatcct gcccgactga tcttcaatac ccaaaccggt ccagcgattg tcgccagcct
    17041 gattgatctc ggcgatcgtt accgtctgct ggttaactgt atcgacacgg tgaaaacacc
    17101 gcactccctg ccgaaactgc cggtggcgaa tgcgctgtgg aaagcgcaac cggatctgcc
    17161 aactgcttcc gaagcgtgga tcctcgctgg tggcgcgcac cataccgtct tcagccatgc
    17221 gctgaacctc aacgatatgc gtcagttcgc cgagatgcac gacattgaaa tcacggtgat
    17281 tgataacgac acccgcctgc cagcgtttaa agacgcactg cgctggaacg aagtgtatta
    17341 cggatttcgt cgctaagtag ccacatcagg tatgtaacgc ctgatgcgac gctgacgcgt
    17401 cttatctggc ctacacgctg cgattttgta ggccggataa gcaaagcgca tccggcattc
    17461 aacgcctgat gcgacgctgg cgcgtcttat caggcctacg cgctgcgatt ttgtagaccg
    17521 gataagcgaa gcgcatccgg cacgaaggag tcaacatgtt agaagatctc aaacgccagg
    17581 tattagaagc caacctggcg ctgccaaaac acaacctggt cacgctcaca tggggcaacg
    17641 tcagcgccgt tgatcgcgag cgcggcgtct ttgtgatcaa accttccggc gtcgattaca
    17701 gcgtcatgac cgctgacgat atggtcgtgg ttagcatcga aaccggtgaa gtggttgaag
    17761 gtacgaaacg acacgccaac tcaccggctg ctctatcagg cattcccctc cattggcggc
    17821 attgtgcata cgcactcgcg ccacgccacc atctgggcgc agtcgggtca gtcgattcca
    17881 gcaaccggca ccacccacgc cgactatttc tacggcacca ttccctgcac ccgcaaaatg
    17941 accgacgcag aaatcaacgg cgaatatgag tgggaaaccg gtaacgtcat cgtagaaacc
    18001 tttgaaaaac agggtatcga tgcagcgcaa atgcccggcg ttctggtcca ttcccacggc
    18061 ccgtttgcat ggggcaaaaa tgccgaagat gcggtgcata acgccatcgt gctggaagag
    18121 gtcgcttata tggagatatt ctgccgtcag ttagcgccgc agttaccgga tatgcagcaa
    18181 acgctgctgg ataaacacta tctgcgtaag catggcgcga aggcatatta cgggcagtaa
    18241 tgactgtata aaaccacagc caatcaaacg aaaccaggct atactcaagc ctggtttttt
    18301 gatggatttt cagcgtggcg caggcaggtt ttatcttaac ccgacactgg cgggacaccc
    18361 cgcaagggac agaagtctcc ttctggctgg cgacggacaa cgggccgttg caggttacgc
    18421 ttgcaccgca agagtccgtg gcgtttattc ccgccgatca ggttccccgc gctcagcata
    18481 ttttgcaggg tgaacaaggc tttcgcctga caccgctggc gttaaaggat tttcaccgcc
    18541 agccggtgta tggcctttac tgtcgcgccc atcgccaatt gatgaattac gaaaagcgcc
    18601 tgcgtgaagg tggcgttacc gtctacgagg ccgatgtgcg cccgccagaa cgctatctga
    18661 tggagcggtt tatcacctca ccggtgtggg tcgagggtga tatgcacaat ggcactatcg
    18721 ttaatgcccg tctgaaaccg catcccgact atcgtccgcc gctcaagtgg gtttctatag
    18781 atattgaaac cacccgccac ggtgagctgt actgcatcgg cctggaaggc tgcgggcagc
    18841 gcatcgttta tatgctgggg tcggagaatg gcgacgcctc ctcgcttgat ttcgaactgg
    18901 aatacgtcgc cagccgcccg cagttgctgg aaaaactcaa cgcctggttt gccaactacg
    18961 atcctgatgt gatcatcggt tggaacgtgg tgcagttcga tctgcgaatg ctgcaaaaac
    19021 atgccgagcg ttaccgtctt ccgctgcgtc ttgggcgcga taatagcgag ctggagtggc
    19081 gcgagcacgg ctttaaaaac ggcgtctttt ttgcccaggc taaaggtcgg ctaattatcg
    19141 acggtatcga ggcgctgaaa tccgcgttct ggaatttctc ttcattctcg ctggaaactg
    19201 tcgctcagga gctattaggc gaaggaaaat ctatcgataa cccgtgggat cgaatggacg
    19261 aaattgaccg ccgtttcgcc gaagataaac ctgcgctggc aacttataac ctgaaagatt
    19321 gcgagctggt gacgcagatc ttccacaaaa ctgaaatcat gccattttta ctcgaacggg
    19381 caacggtgaa cggcctgccg gtggaccgac acggcggttc ggtggcggca tttggtcatc
    19441 tctattttcc gcgaatgcat cgcgctggtt atgtcgcgcc taatctcggc gaagtgccgc
    19501 cgcacgccag ccctggcggc tacgtgatgg attcacggcc agggctttat gattcagtgc
    19561 tggtgctgga ctataaaagc ctgtacccgt cgatcatccg cacctttctg attgatcccg
    19621 tcgggctggt ggaaggcatg gcgcagcctg atccagagca cagtaccgaa ggttttctcg
    19681 atgcctggtt ctcacgagaa aaacattgcc tgccggagat tgtgactaac atctggcacg
    19741 ggcgcgatga agccaaacgc cagggtaaca aaccgctgtc gcaggcgctg aaaatcatca
    19801 tgaatgcctt ttatggcgtg ctcggcacca ccgcctgccg cttcttcgat ccgcggctgg
    19861 catcgtcgat caccatgcgt ggtcatcaga tcatgcggca aaccaaagcg ttgattgaag
    19921 cacagggcta cgacgttatc tacggcgata ccgactcaac gtttgtctgg ctgaaaggcg
    19981 cacattcgga agaagaagcg gcgaaaatcg gtcgtgcact ggtgcagcac gttaacgcct
    20041 ggtgggcgga aacgctgcaa aaacaacggc tgaccagcgc attagaactg gagtatgaaa
    20101 cccatttctg ccgttttctg atgccaacca ttcgcggagc cgataccggc agtaaaaagc
    20161 gctacgccgg gctgattcag gagggcgata aacagcggat ggtgtttaaa gggctggaaa
    20221 ccgtgcgcac cgactggacg ccgctggccc agcagtttca gcaggagcta tacctgcgca
    20281 tcttccgcaa cgagccatat caggaatatg tacgcgaaac catcgacaaa ctgatggcgg
    20341 gtgaactgga tgcgcgactg gtttaccgta aacgccttcg ccgtccgctg agcgagtatc
    20401 agcgtaatgt gccgcctcat gtacgcgccg ctcgccttgc cgatgaagaa aaccaaaagc
    20461 gtggtcgccc cttgcaatat cagaatcgcg gcaccattaa gtacgtatgg accaccaacg
    20521 gcccggagcc gctggactac caacgttcac cactggatta cgaacactat ctgacccgcc
    20581 agctacaacc cgtggcggag ggaatactcc cttttattga ggataatttt gctacactta
    20641 tgaccgggca acttgggcta ttttgagcaa aaaaagagtt cgccagatac cattttgatg
    20701 cgtgacgaat gctttgccat ccagtaccat agcgcccttt ccattcctgg acctgaataa
    20761 caccactacc tcataagcac ggtagcgggt ggttattgcc tgcaattaaa gatatagagc
    20821 cgaacacata tgccttttac acttggtcaa cgctggatca gcgatacaga aagcgaattg
    20881 ggacttggaa ccgttgtcgc ggtggatgcg cgaactgtca ctttactttt cccatctact
    20941 ggtgaaaacc gtctgtacgc acgcagtgat tcccccgtga cccgcgtgat gttcaaccct
    21001 ggtgatacca ttaccagcca tgacggctgg cagatgcaag tcgaagaagt aaaagaagaa
    21061 aatggcttgc tgacctatat cggtactcgc ctggatactg aagagtccgg cgtagccctg
    21121 cgtgaagttt tccttgatag caaactggtg ttcagcaaac cgcaggaccg cctgtttgcc
    21181 gggcagattg accgtatgga ccgctttgcg ctgcgttatc gcgcgcgtaa gtattccagc
    21241 gaacagttcc gtatgccgta cagcggcctg cgcggtcagc gtaccagcct gatcccgcac
    21301 cagctcaaca tcgctcatga tgttggccgc cgccacgcgc cgcgcgtcct gctggctgac
    21361 gaagtgggtt tagggaaaac cattgaagcc gggatgatcc tgcatcagca actgctctct
    21421 ggcgctgctg aacgtgtgct gattatcgtc ccggaaacct tacagcatca gtggctggta
    21481 gaaatgctgc gccgtttcaa cctgcgcttt gctctgtttg atgatgagcg ttatgccgaa
    21541 gctcagcacg atgcttacaa cccgttcgac accgaacagc tggtgatttg ctcgctggat
    21601 tttgcccgtc gtagcaaaca gcgcctggaa catctctgtg aagccgaatg ggacctgctg
    21661 gtggtcgatg aagcgcatca cctggtgtgg agcgaagatg cgccaagccg tgaatatcag
    21721 gccattgaac aactggcaga gcacatgccg ggcgttctgc tgctgaccgc gaccccggaa
    21781 cagctgggga tggaaagcca cttcgcccgt ctgcgtctgc tggacccgaa ccgtttccac
    21841 gattttgcgc agttcgttga agagcagaaa aattatcgtc cggttgcgga cgccgttgcc
    21901 atgctgctgg caggtaacaa actgagcaat gacgaactga acatgctcgg cgagatgatc
    21961 ggcgagcagg atatcgagcc gctgttgcag gcagcaaaca gcgacagcga agatgcccag
    22021 agcgcccgtc aggagctggt ttcgatgctg atggatcgcc acggcaccag ccgcgtgctg
    22081 ttccgtaaca cgcgtaacgg tgtgaaagga ttcccgaaac gcgagctgca caccattaag
    22141 ctgccgctac cgacgcagta tcagacggct attaaagtct ccggcattat gggcgcacgt
    22201 aaaagtgcgg aagatcgtgc tcgcgatatg ctctacccgg agcgtattta tcaggaattt
    22261 gaaggtgata acgccacctg gtggaacttc gatccgcgcg ttgagtggct gatgggctac
    22321 ctgaccagcc atcgctctca gaaagtgctg gtgatctgcg ccaaagctgc cactgcgctg
    22381 caactggagc aggtactgcg cgaacgtgaa ggtattcgcg ctgcggtgtt ccacgaaggt
    22441 atgtcgatta tcgaacgtga ccgcgctgcc gcctggtttg ccgaagaaga caccggcgca
    22501 caggtactgc tgtgctcaga aatcggttct gaaggacgta acttccagtt cgccagccac
    22561 atggtgatgt ttgacctgcc attcaacccg gatctactgg agcagcgtat tggtcgtctg
    22621 gatcgtatcg gccaggcgca cgatattcag atccatgtgc cttatctgga gaaaaccgct
    22681 cagtcggtgc tggtgcgctg gtatcacgaa ggtctggatg catttgagca cacctgcccg
    22741 accggacgca ctatttacga tagcgtatac aacgatctga ttaactatct ggcttcaccg
    22801 gatcaaaccg aaggctttga cgatctgatc aaaaactgcc gcgagcaaca tgaagcgctg
    22861 aaagcacagc tggaacaggg tcgtgaccgc ctgctggaaa tccactccaa cggtggcgaa
    22921 aaagcccagg cactggcaga aagcattgaa gagcaggatg acgataccaa cctgatcgcc
    22981 ttcgccatga acctgctcga tattatcggt atcaatcagg acgatcgcgg cgacaacatg
    23041 atcgtgctga cgccgtccga tcatatgctg gtgccggact tccctggcct gtcggaagat
    23101 ggcatcacca tcacctttga tcgtgaagtg gcgctggcgc gtgaagatgc acagtttatt
    23161 acctgggagc atccgctgat ccgcaacggt ctggatctga tcctttctgg cgataccggt
    23221 agcagcacga tttcactgtt aaaaaacaaa gcgttgccgg taggtacgct gttggtggaa
    23281 ctgatttatg tggttgaagc ccaggctccg aagcagttgc agctcaaccg cttcctgcca
    23341 ccgacgccgg tacgtatgct gctggataaa aacggcaaca acctggcggc gcaggtagag
    23401 tttgaaacct ttaaccgcca gcttaacgcg gttaaccgtc acaccggcag caaactggtt
    23461 aacgccgtgc agcaggatgt tcacgctatc cttcaactgg gtgaagcgca gatcgagaaa
    23521 tctgcccgtg cattgattga tgcagcgcgt aacgaagccg acgaaaaact gtctgccgag
    23581 ctgtctcgtc tggaagctct gcgtgcagtg aacccgaaca ttcgtgacga cgaactgacc
    23641 gccattgaga gcaaccgtca gcaggtaatg gaaagcctgg atcaggcagg ttggcgtctg
    23701 gatgccctgc gtttgatcgt tgtaacgcat cagtaacgga gccgaaaatg gggatggaaa
    23761 actacaatcc accgcaggaa ccctggttgg ttatcctgta tcaggatgac cacattatgg
    23821 tggttaacaa gccgagcggt ttgttgtctg tgccggggcg tctggaagag cacaaagaca
    23881 gcgtgatgac gcgcattcag cgtgattatc cgcaggcaga atcggtgcat cgtctggata
    23941 tggctaccag cggcgtgatt gtagtggcgc tgaccaaagc cgcggagcgg gagttaaaac
    24001 gccagttccg cgagcgcgag ccgaaaaagc agtatgtggc ccgcgtctgg gggcatccat
    24061 cccctgcgga aggtctggtg gatctgccgc tgatttgcga ctggccaaac cgcccgaaac
    24121 agaaagtctg ttacgaaacg ggtaaacctg cgcagacgga atatgaagtg gtggagtatg
    24181 cggcggataa cacggcaaga gtggtgttaa aaccgattac tgggcgttcg catcaattgc
    24241 gtgtgcatat gctggcgctg gggcatccga ttctcggcga tcgtttttat gcatcaccag
    24301 aagcgagagc gatggcaccg cgtttgttgc tacatgcaga gatgttgacg attacccatc
    24361 cggcgtatgg caatagtatg acgtttaaag cgccagcgga tttttaatag tcacgctggc
    24421 gcagttcggt aggcggataa ggcgttcacg ccgaatccgg caattgtgcg ccgattgcct
    24481 gatgcgacgc gggccgcgtc ttatcaggcc tacagtttaa aacttattta aaccctttct
    24541 gctgctttat cagctcatat gcctgctgaa tttcctgcgc tttctgcttc gccatctcca
    24601 tcatctcagg cggcaaacct ttcgccacca gcttatcggg atggtgttca ctcatcagct
    24661 tacggtaggc tcgtttaatg gtggtcgcat catccgtcgg cttcacaccc agcacattac
    24721 aggcatcttc cagcgtcggg ccacgctgcg cttgctgcca gttaccaccg ccagattgct
    24781 gctgataacc gccgccaaac tgtgcaccgc cctgcatcat gcgcaaaaac tggtcaaact
    24841 gggcgcggga gatccctaat tcttctgcaa tgacatacag caccgcccgt tcattcgggt
    24901 gcagtgaacc atcagcaaac gctgcctgaa tctggatctc cagaaacata cgaattaagt
    24961 caaaacgacc aaagcagaca ctgcgaaact ggcgcatctt ttcgcgcagc gggtaattgt
    25021 ctgattttcc cacccggaac gcgttttgcg ccgcagtacg ggaagcgcca tgaaggttca
    25081 ttcggtccat cagctggctg gcgatatgaa tatcagcctc cgtgacgcga cctttggatt
    25141 tggttaaatg ccccatcact tcaaaagtgg tggcaaaaaa cagcgcctga cgctcacgct
    25201 ggttggcgaa ccacgccatt ttacggctac gggctttatc aaacatatgg ccaattaaca
    25261 ggcctaacac tacgccccaa aagccgccgc ccatcagtaa ggccacggcc acgccaatga
    25321 tttttcccca atactgcata tattccccaa atcgacacac ggatatcagg gctatctccc
    25381 acaatataaa ggtgctttta ccgttttccg gctgcagtca attgtgggac atcgcctata
    25441 atttgcatta tcatacctgt cattcaatgc cgtgcctaac accactgacg ctattcggac
    25501 aggattaaca ctagcgtaga gatgacgagt acgttagtct ctgaccgttt gtcacgcgca
    25561 acgttaccga tgatggaaca ataaaatcaa cgtatgaaaa aacgtatccc cactctcctg
    25621 gccaccatga ttgccaccgc cctttatagt caacagggac tggcagccga cctcgcctca
    25681 cagtgcatgt tgggcgtgcc aagctatgac cgtcctctgg tacagggcga taccaatgac
    25741 ttacccgtga ctatcaatgc tgaccacgcg aaaggggact acccggatga cgccgtgttt
    25801 actggcagcg tggatatcat gcagggtaac agccgtctgc aggccgacga agtgcagctc
    25861 catcaaaaag aggcaccagg acaaccggag ccggtacgaa ccgttgatgc gctcggtaat
    25921 gtccattacg acgataacca ggtgatcctc aaagggccga aaggctgggc gaatctgaac
    25981 accaaagata ccaacgtctg ggaaggtgat taccagatgg tgggtcgcca gggccgcggt
    26041 aaagcggacc tgatgaaaca acgtggtgaa aaccgctata ccattctgga taacggtagc
    26101 tttacctcct gtctgccggg ttctgacacc tggagcgtgg taggtagcga aattattcat
    26161 gaccgcgaag aacaagttgc ggagatctgg aacgcccgct ttaaggtggg tccagtaccg
    26221 atcttttata gcccctattt gcagttgccg gtgggtgaca aacgtcgctc tggtttcttg
    26281 atcccgaacg ccaagtacac caccaccaac tactttgagt tctacctgcc atattactgg
    26341 aacatcgcgc caaatatgga tgccaccatc acgccgcatt atatgcatcg tcgtggcaac
    26401 atcatgtggg agaacgaatt ccgctacctc tcccaggcgg gcgctggctt gatggaactg
    26461 gactatctgc cttcagataa agtctatgaa gatgaacacc cgaacgatga cagttcacgt
    26521 cgttggttgt tctactggca acactccggg gtcatggatc aagtgtggcg tttcaacgta
    26581 gactacacca aggtcagcga tcctagctac ttcaatgatt tcgataacaa gtacggttcc
    26641 agtactgacg gctacgcaac gcaaaaattc agcgttggct atgcggtgca aaacttcaat
    26701 gccaccgttt caaccaagca gttccaggtc tttagcgagc agaacaccag tagctactcg
    26761 gcagagccgc agttagacgt taactactac cagaatgatg ttggtccgtt tgatacgcgt
    26821 atttacggcc aggcagtgca ctttgttaac accagagacg acatgcctga agcaacccgt
    26881 gttcacctgg aaccgaccat caatttgccg ctctctaata actggggcag catcaatacc
    26941 gaagcgaagt tgctggcaac ccattatcag caaaccaatc ttgactggta taactccaga
    27001 aacacgacca agctggacga atccgttaac cgcgttatgc cgcaattcaa agttgacggc
    27061 aaaatggtct ttgaacgcga tatggaaatg ctggctccgg gttataccca aacgctggaa
    27121 ccgcgcgcgc agtatttgta cgtgccgtat cgcgatcaga gcgacatcta taactacgac
    27181 tcgtctctac tgcaatctga ctactctggc ctgttccggg accggactta cggcggtctt
    27241 gaccgtattg cctccgctaa ccaggtgacg accggtgtca catctcgcat atatgatgat
    27301 gctgccgttg aacattttaa tatttccgtt ggtcaaatct actatttcac ggagtctcgc
    27361 actggcgatg acaacataac atgggagaat gacgacaaaa cgggctcact ggtgtgggca
    27421 ggcgatactt actggcgtat ctccgagcgt tggggattgc gtggcgggat tcagtacgat
    27481 acacgtctgg ataacgtagc gaccagtaac tccagcattg aataccgtcg ggatgaagac
    27541 cgtctggtac agctgaatta ccgttacgcc agcccggaat atattcaggc tacgctgcct
    27601 aagtactatt ccactgctga gcaatataag aatggtattt cgcaggtagg tgctgtcgcc
    27661 agctggccaa ttgccgatcg ttggtccatt gttggggcct actactacga caccaatgcg
    27721 aacaagcaag ccgactctat gttaggtgtg caatacagct cctgctgcta tgcaattcgc
    27781 gtcggttacg agcggaagct gaacggttgg gataacgata aacaacatgc ggtatatgac
    27841 aacgcaatcg gctttaacat cgaacttcgc ggcctgagct ccaactacgg tctgggtacg
    27901 caagagatgc tgcgttcgaa cattctgccg tatcaaaaca ctttgtgatt tgttgattta
    27961 ccacgtaatc cgcagtgcgg ttaattgaaa tggaaaaagt atgaagaact ggaaaacgct
    28021 gcttctcggt atcgccatga tcgcgaatac cagtttcgct gccccccagg tagtcgataa
    28081 agtcgcagcc gtcgtcaata acggcgtcgt gctggaaagc gacgttgatg gattaatgca
    28141 gtcggtaaaa ctgaacgctg cgcaggcaag gcagcagctt cctgatgacg cgacgctgcg
    28201 ccaccaaatc atggaacgtt tgatcatgga tcaaatcatc ctgcagatgg ggcagaaaat
    28261 gggagtgaaa atctccgatg agcagctgga tcaggcgatt gctaacatcg cgaaacagaa
    28321 caacatgacg ctggatcaga tgcgcagccg tctggcttac gatggtctga actacaacac
    28381 ctatcgtaac cagatccgca aagagatgat tatctctgaa gtgcgtaaca acgaggtgcg
    28441 tcgtcgcatc accatcctgc cgcaggaagt cgaatccctg gcgcagcagg tgggtaacca
    28501 aaacgacgcc agcactgagc tgaacctgag ccacatcctg atcccgctgc cggaaaaccc
    28561 gacttctgat caggtgaacg aagcggaaag ccaggcgcgc gccattgtcg atcaggcgcg
    28621 taacggcgct gatttcggta agctggcgat tgctcattct gccgaccagc aggcgctgaa
    28681 cggcggccag atgggctggg gccgtattca ggagttgccg ggtatcttcg cccaggcatt
    28741 aagcaccgcg aagaaaggcg acattgttgg cccgattcgt tccggcgttg gcttccatat
    28801 tctgaaagtt aacgacctgc gcggcgaaag caaaaatatc tcggtgaccg aagttcatgc
    28861 tcgccatatt ctgctgaaac cgtcgccgat catgactgac gaacaggccc gtgtgaaact
    28921 ggaacagatt gctgccgata tcaagagtgg taaaacgact tttgctgccg cagcgaaaga
    28981 gttctctcag gatccaggct ctgctaacca gggcggtgat ctcggctggg ctacaccaga
    29041 tattttcgat ccggccttcc gtgacgccct gacccgcctg aacaaaggtc aaatgagtgc
    29101 accggttcac tcttcattcg gctggcattt aatcgaactg ctggataccc gtaatgtcga
    29161 taaaaccgac gctgcgcaga aggatcgtgc ataccgcatg ctgatgaacc gtaagttctc
    29221 ggaagaagca gcaagctgga tgcaggaaca acgcgccagc gcctacgtta aaatcctgag
    29281 caactaatgg ttaaaaccca acgtgttgtg atcactcccg gcgagcccgc cgggattggc
    29341 ccggacttag ttgtccagct tgcacagcgt gagtggccgg tcgaactggt tgtttgtgcc
    29401 gatgccactc tccttaccga ccgggcagcg atgctcggtt tgccgctcac cctccgccct
    29461 tattccccca actcccctgc acaaccgcaa actgcgggca cattaacgct acttcctgtc
    29521 gcgctacgcg aatctgtcac tgcggggcag ttagcgattg aaaatgggca ttacgtggtg
    29581 gagacgctgg cgcgagcgtg tgatggctgt ctgaacggtg aatttgctgc gctgatcaca
    29641 ggccccgtgc ataaaggcgt cattaacgac gcaggtattc cgtttactgg tcataccgag
    29701 tttttcgaag agcgctcgca ggcgaaaaaa gtggtgatga tgctggcgac cgaagaactt
    29761 cgcgtggcgc tggcaacgac gcatttaccg ctgcgcgata tcgcagatgc tatcacccct
    29821 gcacttttgc acgaagtgat tgctattttg catcacgatt tgcgtacaaa atttggtatt
    29881 gccgaaccgc gcattctggt ctgcgggctg aatccgcacg cgggcgaagg cggtcatatg
    29941 ggtacggaag agatagacac cattattccg gtgctcgacg agctgcgggc gcaggggatg
    30001 atactcaacg ggccgctgcc tgccgatacc ctgtttcagc cgaaatatct cgataacgcc
    30061 gacgccgtgc tggcgatgta ccacgatcag ggtcttcccg tgctaaaata ccagggcttc
    30121 gggcgcggtg tgaacattac gctgggcctg ccctttattc gcacatcagt ggaccacggc
    30181 accgcgcttg aactggcggg acgtggcgaa gccgatgtcg gcagttttat tacggcgctt
    30241 aatctcgcca tcaaaatgat tgttaacacc caatgaataa tcgagtccac cagggccact
    30301 tagcccgtaa acgcttcggg caaaactttc tcaacgatca gttcgtgatc gacagcattg
    30361 tttctgccat taacccgcaa aagggccagg caatggtcga aatcggcccc ggtctggcgg
    30421 cattgaccga gccggtcggc gaacgtctgg accagctgac ggtcatcgaa cttgaccgcg
    30481 atctggcggc acgtctgcaa acgcatccat tcttaggccc gaaactgacg atttatcagc
    30541 aggatgcgat gacctttaac tttggcgaac tggccgagaa aatgggtcag ccgctgcgtg
    30601 ttttcggcaa cctgccttat aacatctcca cgccgttgat gttccatctg tttagctata
    30661 ctgatgccat tgccgacatg cactttatgt tgcaaaaaga ggtggtgaat cgtctggttg
    30721 caggaccgaa cagcaaagcg tatggtcgat taagcgtcat ggcgcaatac tattgcaacg
    30781 tgatcccggt actggaagtt ccgccgtcag cctttacacc accacccaaa gtggattccg
    30841 ccgtcgtgcg cctggttcct catgcaacga tgcctcaccc ggttaaagat gttcgtgtgt
    30901 tgagccgcat caccaccgaa gcctttaacc agcgtcgtaa aaccattcgt aacagcctcg
    30961 gcaacctgtt tagcgtcgag gtgttaacgg gaatggggat cgacccggcg atgcgagcgg
    31021 aaaatatctc tgtcgcgcaa tattgccaga tggcgaacta tctggcggag aacgcgcctt
    31081 tgcaggagag ttaacgatga tcaattcgcc ccgagtgtgt attcaggttc aaagcgtcta
    31141 cattgaggca caatcttcac ctgataatga acgttacgtt tttgcttata ccgtaaccat
    31201 acgcaatctg gggcgagcgc cagtgcagtt gttggggcgt tactggctga tcaccaatgg
    31261 caatggccgt gaaaccgaag tccagggcga aggagtggtt ggcgtccagc cacttatcgc
    31321 gcctggcgaa gagtaccagt acaccagcgg tgcaatcatt gaaaccccgc tgggcaccat
    31381 gcagggtcac tacgaaatga tcgatgaaaa tggcgtccct ttcagcatcg acattcccgt
    31441 attccgactc gccgttccca cactcattca ttaaaagaat atggcgacat accttattgg
    31501 cgacgttcat ggttgttacg atgaactgat cgcattgctg cataaagtag aatttacccc
    31561 tgggaaagat accctctggc tgacgggcga tctggtcgcg cgcggcccgg gttcgctgga
    31621 tgttctgcgc tatgtgaaat ccttaggcga cagcgtacgt ctggtgctgg gcaatcacga
    31681 tctgcatctg ctggcggtat ttgccgggat cagccgcaat aaaccgaaag atcgcctgac
    31741 accgctgctg gaagcgccgg atgccgacga gctgcttaac tggctgcgtc gccagccttt
    31801 gctgcaaatc gacgaagaga aaaagttggt gatggcccac gcagggatca cgccgcagtg
    31861 ggatctacag accgccaaag agtgcgcgcg cgatgtagaa gcggtgctat cgagtgactc
    31921 ctatcccttc tttctcgacg ctatgtacgg cgatatgcca aataactggt caccggaatt
    31981 gcgggggctg ggaagactgc gttttatcac caacgccttt acccgtatgc gtttttgctt
    32041 cccgaacggt caactggata tgtacagcaa agaatcgccg gaagaggccc ctgccccact
    32101 gaaaccgtgg tttgcgattc ctggccctgt cgctgaagaa tacagcatcg cctttggtca
    32161 ctgggcatcg ctggagggca aaggtacgcc ggaaggtata tacgcgctgg ataccggctg
    32221 ctgctggggt ggtacattaa cctgcctgcg ctgggaagat aaacagtatt ttgtccagcc
    32281 gtcgaaccgg cataaggatt tgggcgaagc ggcggcgtct taaacacagc ctgatatagg
    32341 aaggccggat aagacgcgac cggcgtcgca tccggcacta gccgtaaatt ctatacaaaa
    32401 ttaccgccgc tccagaatct caaagcaata gctgtgagag ttctgcgcat cagcatcgtg
    32461 gaattcgctg aataccgatt cccagtcatc cggctcgtaa tccgggaaat gggtgtcgcc
    32521 ttccacttct gcgtcgatat gcgtcagata cagtttctgc gcttttggca ggaactgctc
    32581 ataaacgcga ccgccgccaa tcaccatgat ttctggtacg tcaccacacg ccgcgatggc
    32641 ttcatccacc gacttcaccc acgttacgcg atcgtccgta cccggttgac tgctgaggat
    32701 aatatttttg cgtcctggca acggacgacc gattgattcc caggtatggc ggcccataat
    32761 cacgggttta tttaaggtgt tgcgtttaaa ccaggcgaga tcggcaggca ggttccacgg
    32821 catggcgttt tccatgccga taacgcgatc taccgctaac gccgcaatca gactgatcat
    32881 tgagatttcc cgataaaaaa aattgtcgcc actatacgta aagcgtaaac cgtcgtcgac
    32941 tggtgcgagg atgatgttga ggaaaatttt atattctgct ggcgagtcca cgctctctcc
    33001 ctggactcgc cgcattacaa tgaaacaaaa acaaacagtt agctgtaaag tgtgatttat
    33061 gtcactcttt attaggatga gggtttcgtt tccggttcat ccgccatgtt gccggtatgt
    33121 ttaccttctt cggttccctg ccagccatgt cgttgaatta atgacagatg ttcgcggtcc
    33181 tcggtaatga tctcacttaa catcgcgctg gtgcgtttat agaccgccgc gcgggctttg
    33241 gtgtcgttct caaccattgc catctcttcc accatctgaa tattaaagcg gcggaacaca
    33301 tcggcacgtt ctcgcgcttc atacggcccc agacctaaac tttccagtgc cagacgcccg
    33361 gttttcagcg caccttcgaa ggtttcacgc tccggctttt caacgcctgc ctgacgcaaa
    33421 cgaatgtagt ggtcgacatc gcgggcgcgg gcaataatct gcaaatgcgg gaagtgttct
    33481 ttcaccatct ctgtcagttg caggttggtt tgcggatcgt cgatggcgtt aatcagcact
    33541 tccgctttcg ccgctcccgc agattccagt aaatccatcc gcgtggcatc gccataaaac
    33601 actttcatac caaatttacg caaggtttcg atatggtccg gatcgtgatc gagcaccacc
    33661 attttcaccc cgctggagag cagtaaacgt ccggtgatct gcccaaaacg accgaatccg
    33721 gcaatgatta cccgcggctg ttcttcgtcg atctcatcgg cttcacgcgc ctcttcagta
    33781 gaagattgct caaggcgatt gaggatcacc agcagaatcg gcgttgccgc catcgacagc
    33841 gccaccgcca gggtcagcga tttcgcccac tccggctcca gcacattcgc catctgcgcc
    33901 gcgccaaata ccacaaaggc aaactcactg ccctgcccta acaacaccgc aaaccaacga
    33961 cgctgtttat ttggcacttg caacggtcgg gcaatcagcc acagcatggc gattttgatg
    34021 atgaggaaac cgagcagcaa aatgacaatg cgcaatgggt tttcaagcag cgtgccaaag
    34081 tctatcgaca tgccaacacc gatgaaaaac agccccaaca gcaaaccttt aaagggttcg
    34141 atatcgctct ccagcgcatg acggtattcc gagcttgcca gcagtacgcc cgccagaaac
    34201 gcgcccatcg ccatcgacaa gccgacctct tccagcagca aaccaaagcc aaacacgagg
    34261 aataacgcca cggcactaaa cacttcccgc aagccagagc gggctacaaa acgcagcgcc
    34321 ggacgcgtga catagcgccc cagcaatacc accagcacca gcgcacccgc cacttttaac
    34381 gccgagagag caaatgcgcc catcgtcgtc gaggcactgc tcgttgccag tagcggaatc
    34441 atcgccacca gcgggatcgc cgcgatatcc tggaacagca gcaccgcaaa ggcactgcga
    34501 cccatttgcg tcaccatcag attgcgttca ttcatcgcct gcatggcaat cgccgtagag
    34561 gagagcgcca gcgtcatgcc gatcaattcc gcgacctgcc agcgcagccc aagtaacatg
    34621 cagaacagcc ccagcaggcc gccgcaaatc accatctgca atgcgccacc gccgaacact
    34681 gccgcacgca gcttccacag cctttgtgga tcgagttcga ggccgataat aaacagcatc
    34741 agcaccaccc caatctcggc aaagtgcaga atagattcgg catcggtcac cagtcgcagc
    34801 ccccacgggc caataatgca gccggcgatc aggtagccaa gtaccgatcc cagaccaaga
    34861 cgtaccgcaa tgggtacaat cagcgctgcc gaaccgagat aaatcagcgc ctgaatcagc
    34921 gtatggctat ccatgatggg cctcctgcca ttccagcaga cgttgcttat agtgacgcgc
    34981 ctgcccttcg agggtttcgt cgtcacaaat aaaggtgcag tgcatggcaa acggtggcag
    35041 ccagttcagc ccgcagtaga ttgccgtcgc ctgtagcggc tgcgacagca catcaaagcc
    35101 cggatgcgca ccaatttcaa aatggctttc cccgccgccg gtcgtcaccg cccacagcaa
    35161 atgtttgcca tgcagcgcct tgccgccgtg accgtaagcc cagccgtgcg acaaaacttt
    35221 atcgatccaa agtttaagaa gcggaggaat gctgtaccac tgcatcggat gctgccagac
    35281 gatcagatcg gcgcgagaca gcgcctcctg ctcggcggca atatcgatat tgaagtcagg
    35341 atagagttga taaagagagc gaatttcgac gccttccagc gtccttgcct gttcaagcat
    35401 ccgtttattc gcatgggaat gatgcggata cggatgcgca taaattataa gaatcatagg
    35461 tagcccgcgt gattacgcct ttgttttccc acaaagtgta gtcatatatt cacgcggctt
    35521 atagtcaata atattgattc agaaaagaga gaaatctgaa caatttaccc cattctctgc
    35581 ccgcggatcg tcatattgct ggtttgcgcc aatgacatcc ctcgatgtct ccggggcaaa
    35641 cgctacggaa atcaacaagc caaacagcga gatacccgcc cccattagca tcgtgttact
    35701 gataccgtaa ttattgataa agatcggcag tgcccaggtc gaaacaatgg tgccaatacg
    35761 gcttaaggac ataatcacgc ccacggcaga ggcgcggata tctgtcggga agagttcatt
    35821 aggatagagc cactgcaaat tacccggccc gccagagaaa aaggcataca ccgcaaaggc
    35881 catcactacc agccagatcc ccatatccgg gatcagcccc aaaaccgcca gctccagcgt
    35941 catcatggca aagctgccaa tcaacaatgg acgccgtccg gcagtgttta accacagcat
    36001 cggcggaata cagccgagca taaagaacag gctaatcacc acgttcccca gcgccgcgtt
    36061 tttgccaaca cccaatccca acaaaccaac gatttgcggg ccaaaggtgt aaatggcgaa
    36121 cattgggatc acctggcagg tccagatggc ggcaacaaac agaacaaaag gaaaatggcg
    36181 gcgattaaac agatcgcgaa aacgggtttg ctgcggctgc tcttcatcga aagccaccgg
    36241 ttcgccaaac agttttatca tcatctcttc gcactctttt actcgccctt tgcgtaataa
    36301 ccagcgggga gattcaggca gttcgaatcg accaatcaaa atcaacaaac aggggatcgc
    36361 cgcgctaccc agcatccagc gccagccgcc ttccacatca taaagccagt agccgaccag
    36421 atcggcgcag gtcgcgccga cataccacat ggcggcgata aagctgatgg aaaatgcccg
    36481 ctgacgggta ctggagaact cggtgatcat tgaggtggcg atgggataat cggcaccgat
    36541 gacaatgccg ataagtaccc gcatcaccaa cagttcgacg ggggatgaaa caaacatcgt
    36601 cgccaccgat atcacgccga tggcgatgat atcaatgagg aacattttgc gccgtccgac
    36661 tttatcggaa atatagccaa acagcgatgt gccaacgaac agcccggcga gcgttcccgc
    36721 gcccaacaag ccaatccagt cagcgtccag ttttagcgcc ggagtcagtt gctccagcgc
    36781 cacgccaatc attaccagta cataaccatc ca
//
LOCUS       DADKRT010000017        36530 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.017, whole genome shotgun sequence.
ACCESSION   DADKRT010000017 DADKRT010000000
VERSION     DADKRT010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 36530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36530
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.017"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            24..896
                     /locus_tag="JQ356_000735"
     CDS             24..896
                     /locus_tag="JQ356_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001381404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4620915.1"
                     /translation="MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFT
                     RKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQ
                     LISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPP
                     LRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPY
                     SFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT
                     MLQHIAEDRDGTNH"
     gene            complement(893..2370)
                     /gene="scpC"
                     /locus_tag="JQ356_000736"
                     /pseudo
     CDS             complement(893..2370)
                     /gene="scpC"
                     /locus_tag="JQ356_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA:succinate CoA transferase"
     gene            complement(2394..3179)
                     /gene="scpB"
                     /locus_tag="JQ356_000737"
     CDS             complement(2394..3179)
                     /gene="scpB"
                     /locus_tag="JQ356_000737"
                     /EC_number="7.2.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA decarboxylase"
                     /protein_id="HAY4620916.1"
                     /translation="MSYQYVNVATINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN
                     RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM
                     VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL
                     IFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGE
                     AHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
     gene            complement(3190..4185)
                     /gene="meaB"
                     /locus_tag="JQ356_000738"
     CDS             complement(3190..4185)
                     /gene="meaB"
                     /locus_tag="JQ356_000738"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HAY4620917.1"
                     /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
                     DAIMPYCGNTLRLGVTGTPSAGKRTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
                     GDKIRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS
                     ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYE
                     SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIEFKTALTASGRLQQVRQQQSVE
                     WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD"
     gene            complement(4178..6322)
                     /gene="scpA"
                     /locus_tag="JQ356_000739"
                     /pseudo
     CDS             complement(4178..6322)
                     /gene="scpA"
                     /locus_tag="JQ356_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417392.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
     gene            complement(6526..7419)
                     /locus_tag="JQ356_000740"
     CDS             complement(6526..7419)
                     /locus_tag="JQ356_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator ArgP"
                     /protein_id="HAY4620918.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
                     RMMRKVTDALLDYGHKVLRQD"
     gene            7802..8461
                     /gene="rpiA"
                     /locus_tag="JQ356_000741"
     CDS             7802..8461
                     /gene="rpiA"
                     /locus_tag="JQ356_000741"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HAY4620919.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV
                     VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            8716..9948
                     /locus_tag="JQ356_000742"
     CDS             8716..9948
                     /locus_tag="JQ356_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-3-phosphoglycerate dehydrogenase"
                     /protein_id="HAY4620920.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
                     EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
                     NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
                     ALQAMKAIPGTIRARLLY"
     gene            10177..10236
                     /gene="ibsC"
                     /locus_tag="JQ356_000743"
     CDS             10177..10236
                     /gene="ibsC"
                     /locus_tag="JQ356_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsC"
                     /protein_id="HAY4620921.1"
                     /translation="MMRLVIILIVLLLISFGAY"
     gene            10569..10628
                     /locus_tag="JQ356_000744"
     CDS             10569..10628
                     /locus_tag="JQ356_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY4620922.1"
                     /translation="MMRLAIILIVLLLISFPAY"
     gene            complement(10729..11331)
                     /locus_tag="JQ356_000745"
     CDS             complement(10729..11331)
                     /locus_tag="JQ356_000745"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HAY4620923.1"
                     /translation="MTQLPELPLTLSRQEIRKMIRQRRRALTPEQQQEMGQQAATRMM
                     TYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQ
                     SELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQ
                     HYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW"
     gene            complement(11352..11535)
                     /gene="ssrS"
                     /locus_tag="JQ356_000746"
     ncRNA           complement(11352..11535)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="JQ356_000746"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(11577..11906)
                     /gene="zapA"
                     /locus_tag="JQ356_000747"
     CDS             complement(11577..11906)
                     /gene="zapA"
                     /locus_tag="JQ356_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HAY4620924.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
                     TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
                     KTNQNFE"
     gene            12074..12652
                     /gene="ygfB"
                     /locus_tag="JQ356_000748"
     CDS             12074..12652
                     /gene="ygfB"
                     /locus_tag="JQ356_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YgfB"
                     /protein_id="HAY4620925.1"
                     /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
                     SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
     gene            12678..14003
                     /gene="pepP"
                     /locus_tag="JQ356_000749"
     CDS             12678..14003
                     /gene="pepP"
                     /locus_tag="JQ356_000749"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HAY4620926.1"
                     /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY
                     RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
                     LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADEIMNSALEKLRKGSRQNLTAP
                     ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH
                     EFNRHGARYPSYNTIVGSGENGCILHYTENESELRDGDLVLIDAGCEYKGYAGDITRT
                     FPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKG
                     DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
                     AEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
     gene            14000..15178
                     /gene="ubiH"
                     /locus_tag="JQ356_000750"
                     /gene_synonym="visB"
     CDS             14000..15178
                     /gene="ubiH"
                     /locus_tag="JQ356_000750"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HAY4620927.1"
                     /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
                     FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
                     GQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVA
                     ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
                     RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARA
                     ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQ
                     RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
                     "
     gene            15201..16403
                     /gene="ubiI"
                     /locus_tag="JQ356_000751"
                     /gene_synonym="visC"
     CDS             15201..16403
                     /gene="ubiI"
                     /locus_tag="JQ356_000751"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HAY4620928.1"
                     /translation="MQCVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADA
                     PPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYS
                     HLGHIVENSVIHYALWNKAQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV
                     IGADGANSWLRNKADISLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA
                     RQFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
                     YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
                     NDLPEWLR"
     gene            complement(16477..16560)
                     /locus_tag="JQ356_000752"
     CDS             complement(16477..16560)
                     /locus_tag="JQ356_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620929.1"
                     /translation="MSKNTKSKNNDIRKYNAKTEVKLVYFK"
     gene            16850..17944
                     /gene="gcvT"
                     /locus_tag="JQ356_000753"
     CDS             16850..17944
                     /gene="gcvT"
                     /locus_tag="JQ356_000753"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HAY4620930.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
                     GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY
                     YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
                     NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH
                     GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            17968..18357
                     /gene="gcvH"
                     /locus_tag="JQ356_000754"
     CDS             17968..18357
                     /gene="gcvH"
                     /locus_tag="JQ356_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HAY4620931.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            18476..21349
                     /gene="gcvP"
                     /locus_tag="JQ356_000755"
     CDS             18476..21349
                     /gene="gcvP"
                     /locus_tag="JQ356_000755"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HAY4620932.1"
                     /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
                     IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
                     QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
                     TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
                     AFPVLYTGRDGRVAHECILDIRPLKEETSISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
                     YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYL"
     gene            21615..22358
                     /locus_tag="JQ356_000756"
                     /pseudo
     CDS             21615..22358
                     /locus_tag="JQ356_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417378.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            complement(22415..23848)
                     /locus_tag="JQ356_000757"
     CDS             complement(22415..23848)
                     /locus_tag="JQ356_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY4620933.1"
                     /translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHG
                     VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
                     QPNEEGLKFYDSLFDELLKYNIEPVITLSHFEIPLHLVQQYGSWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHDNPEETMYQVLHHQFV
                     ASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMINAVKAEGGTGDAISGFE
                     GSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            23893..24204
                     /locus_tag="JQ356_000758"
     CDS             23893..24204
                     /locus_tag="JQ356_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HAY4620934.1"
                     /translation="MQPNDITFSQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRF
                     EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKC
                     L"
     gene            24368..25027
                     /locus_tag="JQ356_000759"
                     /pseudo
     CDS             24368..25027
                     /locus_tag="JQ356_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311798.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
     gene            complement(25223..26203)
                     /gene="ygfZ"
                     /locus_tag="JQ356_000760"
     CDS             complement(25223..26203)
                     /gene="ygfZ"
                     /locus_tag="JQ356_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HAY4620935.1"
                     /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
                     VTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
                     VFSKVTIAADDERVLLGVAGFQARAALANLFSELPSREKQVVKEGATTLLWFEHPAER
                     FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT
                     GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
     gene            26446..26712
                     /gene="sdhE"
                     /locus_tag="JQ356_000761"
     CDS             26446..26712
                     /gene="sdhE"
                     /locus_tag="JQ356_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HAY4620936.1"
                     /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
                     RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI"
     gene            26693..27100
                     /locus_tag="JQ356_000762"
     CDS             26693..27100
                     /locus_tag="JQ356_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin CptA"
                     /protein_id="HAY4620937.1"
                     /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
                     LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
                     GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR"
     gene            complement(27140..27661)
                     /gene="fldB"
                     /locus_tag="JQ356_000763"
     CDS             complement(27140..27661)
                     /gene="fldB"
                     /locus_tag="JQ356_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HAY4620938.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
                     QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG
                     MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW
                     CEQILNEMAEHYA"
     gene            27773..28669
                     /gene="xerD"
                     /locus_tag="JQ356_000764"
     CDS             27773..28669
                     /gene="xerD"
                     /locus_tag="JQ356_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HAY4620939.1"
                     /translation="MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
                     LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            28694..29404
                     /gene="dsbC"
                     /locus_tag="JQ356_000765"
     CDS             28694..29404
                     /gene="dsbC"
                     /locus_tag="JQ356_000765"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000715205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HAY4620940.1"
                     /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
                     AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGAAPVNVTNKMLLKQLNALEKEMIVYK
                     APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLESQAEQQMKAIW
                     CAKDKNKAFDDVMAGKAATPASCDIDIADHYALGVQLGVSGTPAIVLSNGTLVPGYQP
                     PKEMKEFLDEHQKMTSGN"
     gene            29410..31143
                     /gene="recJ"
                     /locus_tag="JQ356_000766"
     CDS             29410..31143
                     /gene="recJ"
                     /locus_tag="JQ356_000766"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HAY4620941.1"
                     /translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS
                     VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN
                     IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
                     HHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
                     IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
                     KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
                     GMQIEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
                     ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
                     LQIIIDNIWPI"
     gene            31234..32332
                     /gene="prfB"
                     /locus_tag="JQ356_000767"
     CDS             join(31234..31308,31310..32332)
                     /gene="prfB"
                     /locus_tag="JQ356_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HAY4620942.1"
                     /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQP
                     DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE
                     LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG
                     FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            32342..33859
                     /gene="lysS"
                     /locus_tag="JQ356_000768"
     CDS             32342..33859
                     /gene="lysS"
                     /locus_tag="JQ356_000768"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HAY4620943.1"
                     /translation="MSVQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
                     TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
                     AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE
                     YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(33902..34450)
                     /gene="idi"
                     /locus_tag="JQ356_000769"
     CDS             complement(33902..34450)
                     /gene="idi"
                     /locus_tag="JQ356_000769"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HAY4620944.1"
                     /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKG
                     QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF
                     RYRATDPNGIVENEVCPVFAARTNSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP
                     WMVMQAANSEARKLLSAFAQHN"
     gene            34505..34576
                     /locus_tag="JQ356_000770"
     CDS             34505..34576
                     /locus_tag="JQ356_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620945.1"
                     /translation="MINQVSVYRQPPVLSGCRQVKTI"
     gene            complement(34573..34698)
                     /locus_tag="JQ356_000771"
     CDS             complement(34573..34698)
                     /locus_tag="JQ356_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620946.1"
                     /translation="MNLLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF"
     gene            complement(34700..36148)
                     /locus_tag="JQ356_000772"
     CDS             complement(34700..36148)
                     /locus_tag="JQ356_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417364.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HAY4620947.1"
                     /translation="MSAIDSQLLSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAG
                     AVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFA
                     AVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSVGL
                     SIIQVGIDWAAGGKGNPQYGNPVYSGISFAVLIFILLITRYAKGFMSNVAVLLGIVFG
                     FLLSWMMNEVNLSGLHDALWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFL
                     ALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVC
                     ISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYN
                     LYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHAD
                     LVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE"
BASE COUNT         8795 a         9197 c         9768 g         8770 t
ORIGIN      
        1 tggacatttt tatttcgaaa aagatgcgca atttcatttt attagcgcaa accaataata
       61 ttgcccgggc ggcagaaaaa atccatatga cggcttcgcc atttggtaaa agcattgccg
      121 cgctggaaga acaaattggc tatacgctat ttacccgcaa agataataat atcagcctca
      181 ataaagccgg tcaggaactg tatcaaaaac tgttcccggt ttatcaacga ctttctgcga
      241 ttgataatga aatccataac tcagggcgtc gttcacgaga aattgtgatt ggcatagata
      301 atacttatcc gacaattatt ttcgatcagt tgattagtct cggagataag tatgaaggcg
      361 tgaccgccca gccagttgag ttcagcgaaa acggcgttat cgataatctt tttgaccgtc
      421 agttagattt tattatctcc ccacagcatg tatctgcacg agttcaggaa ctggaaaacc
      481 tgactatcag tgaattacca ccgctgcgat tgggctttct cgtttctcgc cgttatgaag
      541 agcgtcaaga gcaagagctg cttcaggagc tgccctggct acaaatgcgc tttcaaaacc
      601 gggctaactt cgaagcaatg attgatgcga atatgcgacc ttgtgggatc aatcccacca
      661 ttatttatcg tccctacagt tttatggcca aaatcagcgc cgtggagcgc ggacattttc
      721 tgacggtgat cccgcatttt gcctggcgac tggtgaatcc ggcaacgctg aaatattttg
      781 atgcgccgca caggccgatg tatatgcagg aatatcttta ttcaatcaga aatcatcgtt
      841 ataccgccac gatgcttcag catattgctg aagatcgtga cgggacaaac cattaaccca
      901 gcatcgagcc ggttgcaatt aaattacggt gtaagtcgaa gacgtggcta agatcgtggt
      961 gaatatgtcc gccgggcgca ttttccagat agcgatgcag ataatcccga tacataggat
     1021 gtgcacaatt atcaatgata gtgcgggcgc gttgaagcgg ggaaagaccg cgcagatcgg
     1081 cgatcccttg ttcggtgatg atcactttga cgctgtgttc gctgtgatca acatggctgc
     1141 acattggcac gacggttgag atcttgcctt ctttagcaat cgacggagcc ataaagatcg
     1201 acagatacgc gttgcgttca aaatcaccgc tgccgccgat gccgttcatc agatcgaccc
     1261 cggctacgtg cgttgaattt gcatgcccgt aaatatcaaa ctccaggccg acgttcagag
     1321 cgatgacgcc cagacgacgg atgatttccg ggttattgga aatctcctgc ggacgcaaca
     1381 caatgcggct ggcaaagtaa tccatattgt cgtaaatctt gcgcagggaa tcggccgaga
     1441 ttgtcaggct ggaggcgctg gccccgctga ttttgtcggt ttccagtaaa tgcaccaccg
     1501 attcctgtag cacttccgaa tacatcatga acggaggaat ttccgggttt tcccccagac
     1561 gcgccattac cgcattattg atattgccca cgccactttg cagcggcaga aattccggcg
     1621 gaatacgcca tgcgccattt cctgcaataa gaacgtgacc acgttatcgg caatctgctg
     1681 gcacatggga ttttgcttat ccagcatatt accggcgtcg ggcaagttgg tttccacgac
     1741 ggcgacaatc tttttcggat cgatttgcac atagcgggta ccgacgcgat ccattgcatg
     1801 gaagatcgac acgctattgc gccgcggtgg cgcgccagga atcacaatat ctgccagttc
     1861 tgcaacgcgc ggatcgtgat agtgattaag ttcaatgatc actttcttcg ctcgcagcag
     1921 ccaggtcggc gcattaccga tcccgctggt taaccagact cgaccatccg gtgccagtgc
     1981 cgatgcttca atgacggcaa catcaatgtc gccgaagaaa ccgtaattga ccatttgcgc
     2041 cacttcgctc aaatgcaggt caacgaaact caccgcgccc tgattgatct ttttacgtaa
     2101 accggacgat gtttgatatg gcgcacgcca ggaaacagca tcggcgtcag aaagtacatc
     2161 gtcagcggcg gcgctgattg acgcccccgt cagcaggcga atttgatacg gctttttggc
     2221 ctcatgctgt tcgttagctc tgcgggcaat cgcggtgggt agggctttcg gcgaacccgc
     2281 cggggtaaag ccgctaaatg ccaccatgtc gttatgctgg ataatttctg ccgcttcatc
     2341 ggcggtcatc cttgtccact gagtttccat ttttactcct tcgttcgcag ggattaatga
     2401 ccaacgaaat taggtttacg tttttcgagg aaagcgttca ttccttcctg gtaatcttcg
     2461 ctgtcataaa ccgcgcgtcg catcccctga atacgttcaa attcatcgga gttcatggtg
     2521 tgcgcttcgc ccagtacacg cagctcttct ttgataacag caatggctaa cggcgctttc
     2581 tcagagatgt ggtgcgccat ttgtaaggtg aaatcttcca gttcttccac ttccacaaca
     2641 tggttgagga tgccgacagc cagcgcgcgc tgggcggtga ttggcgaagc ggtaaaaatc
     2701 agctctttga caatgtggaa gcccgcgtcg cgggtcaggt tgtgaatgcc gaccaggtta
     2761 tacgggacgc cgaggtttac aggcgtcatt gagaaggttg aggtactggc ggcgatgatc
     2821 agatcggaac tcatgatcat ttcaaatgcg ccaccccaaa cactaccttc caccatcgaa
     2881 atgatcggtt tcgggaattt ttggatcatg cgggtgattt gacgcaatgg atcatcatag
     2941 gagagcggat cgcgaccgcc agacggcagt tcgtgaatat cgtgacctgc ggagaagact
     3001 ttggatccac tcggcgcgcg caaaatgata cagcgaattt ccggccggtt gagatcgctt
     3061 aacgcctgca taagatcatc aataaagact ttacttaagg cattaagttt tcggccatag
     3121 ttaaactcaa tgaccgccac tttgttgata gtggcaacgt tcacatactg ataagacata
     3181 aaaattcctt taatcaaaat attgcgtctg gataaattca ctgagctgcc gcaggccggt
     3241 gcgcggtgag agcgtattgt ttttgaccgc taaaagcgtc tggcggtaat agcgatcgaa
     3301 atcttcattc gcgaacaggt gattcagtac ttcttcttcg gtctgcttac gcagccattc
     3361 caccgattgt tgttgccgca cttgttgtaa acgaccactg gcagttagcg cggttttgaa
     3421 ctcgatgatg gcgtgccaga tctcatcgat tccacgtttt tccagtgcgc tacaagtcag
     3481 aacccgtggc tgccattcgt cgtatttacg tcgcagaata tgcagggcac tctcgtacat
     3541 atgccgggca atggcgacat tggtatggtt atcgccatcg tctttgttga taacgatcag
     3601 atcagccact tccatcagcc cttttttaat gccctgcaga tcatcgccgc caccggcaat
     3661 ttgcaacgag ataaaacagt ccaccatgcg ggcgacttct gtttccgact gcccgacgcc
     3721 aaccgtttcg acaatcacta cgtcataacc cgccgcttcg cataacagca ttaattcccg
     3781 cgctcgctga ctggcaccgc ccagatgacc ggaggatggt accgggcgaa taaacgccgc
     3841 ttcggcacgc gccaggtcat tcatgcggat tttatccccg agaatgctac cgccagtgac
     3901 cgggctgctg ggatcgaccg caataaccgc gacctttaat ccctctcgaa tcaacaacat
     3961 gccaaaggcc tcaagaaagg ttcttttccc cgcgctgggg gtgccggtaa cgcccagtcg
     4021 cagggtgtta ccgcagtacg gcataatggc atcaagcagc tgcgtactta gtgcctgatg
     4081 acgcgggtga cggctttcca ccagcgtcat ggcctgggcg agtgtggcac gctcaccctg
     4141 acgtaagcgg cgaatacttt ctgccagcgt ggcttcatta atcatgatgc tggcttatca
     4201 gattcagtac gtcgcgcaca ctgtcgagca taggtgtacc tggaccataa atcgccgcca
     4261 cgccgcgctc ttgcaggaag gcgtaatcct gcggtggaat gacgccaccg gcgactacgc
     4321 agatatcttc gcgtccccat tttttcagcg cctcgaccag ttccgggatc agcgttttat
     4381 gaccggcagc cagtgaggat gcgcccacta cgtgaacgtc attttctact gccaggcggg
     4441 cgatctcttc aggtgtagag aacatcgggc ttaaatctac gtcgaaaccg agatcggaat
     4501 aggcgctggc gatcactttc gagccacgat cgtgcccatc ctggcccatt ttggcgatca
     4561 gaatgcgcag gcgacgacca ttgtcggcaa ggaactgctc cgtttgcgca acaatggcat
     4621 cgaactcgga ggccgatttc tcagattgat gatagctttg cgcaatcacg ccggtaacac
     4681 actggcttgg caccagataa cggtcgaaag cggcttccag cgcatcggaa atttcaccca
     4741 gggtggcgcg aacgcgagcg gcattaacag cggcagccag caggttttcg ttatgctgtg
     4801 cggcgtgagt cagggcgttc aacgcggcgg ttacggcggc atcatcacgg gtggcgcgaa
     4861 tgcgttccag cgaagcaatt tgctcgttac gcaccatcac gttgtcgatc tcaagtacat
     4921 cggtttcgtc ttcgtgatcc agtttgtact tgttgacacc aacgatgaca cgtttgccct
     4981 ggtcgataag cgactgttcg cgcgctgagg cctattcgat cattcgtttt ggcagacctg
     5041 cttcgatcgc tttcgccata ccaccggctt cgtcgatctg ttggataata gctctggctt
     5101 gtttgacgat ttgatcggtc agcgactcaa tgtaatagga tccggccagt ggatcgacgg
     5161 tgcggcagag ttctgattct tcctggatga tgatctgggt gttgcgggca atgcgtgctg
     5221 agaaatcggt aggcaaacca agcgcttcgt caaaggcgtt ggtatgcagt gactgagtac
     5281 cgcccagcgt cgcagccagt gcttcaatgg tggtgcggat aacgttgtta tacggatcct
     5341 gttcagtcag gctccagcct gaggtctggc agtgggtacg cagcgccagt gatttcgggt
     5401 cctgtgcgcc aaatccactg accgcttcgc tccataaata acgtgccgca cgcaacatgg
     5461 cgacgttcat aaacagatcc atgccgatgc cgaagaagaa cgacaggcga ggagcgaagt
     5521 catcaatttt cagtccggca gagattgctg ctttgatgta ctcaatccca tcagcgagcg
     5581 taaatgctac ctgctgcacg cagttggcac ccgcttcacc catgtggtaa ccgctgatac
     5641 tgatggtatt aaatcgcggc atgttgccgg aacaccaggc gatgatgtcg gcgataatgc
     5701 gcattgacgg ttttggcggg taaatatagg tgttgcggca gaggtactct ttgaggatat
     5761 cgttctgaat ggtgccggtc agtttatcag gtgtaacacc ttgctcttcc gcggcgacga
     5821 tataaaacgc cagtactggt agcactgcgc cattcatggt catcgaaacc gacattttat
     5881 ccagcgggat ctggtcgaac aggactttca tatcttccac ggtgtcgata gcgacgcccg
     5941 ctttgccgac gtcgcccgcc acgcgcgggt tatcggagtc gtagcctcgg tgggtggcaa
     6001 ggtcaaacgc aacggaaaga cctttttgcc cggcggccag gttacggcga taaaaagcgt
     6061 tggactcttt tgctgttgaa aaaccagcat actgacggat ggtccacggt tgggcggtat
     6121 acatagtggc acgcgggcca cgaacgtagg gcggcaaacc aggaagggta cctgtcacct
     6181 ccagattatc gagatcggct tcggtataca gcggcttgat ggtgatccct tccgcggttt
     6241 gctgaaccag cgagtcgaca gttttctccc gacggctcaa ttccttgttg gcaagctgtt
     6301 gccactcctg cacgttagac attatttgct ccgtaaaacg caatcaaaat gagggtattt
     6361 gcgcctacgg tgagcttttt acgtgggttt gtcgccagca aaaaaaatgc attcagacgt
     6421 cgttttttgc cgcctgagat ttgtctattt tgtgatgtga ttcaaggaat acaaaaagaa
     6481 gtgaggacaa cgcctgatat gtgctatcag gcattatttg atggattaat cctgacgaag
     6541 gactttgtga ccataatcga gcaacgcatc agtgacttta cgcatcatgc ggctttcagg
     6601 agcaaagcgg tgccagtaga gcatccggcg ttgaaatagc cctggcgtta agtcaatcag
     6661 ttcaccgctg gctagttctt tctcgatttg caggtgcggg atcatacagc aggtggtgcc
     6721 ctggcgagca agttgcacga acgcttctga agaattaacg atatggcagg gcacgctgcc
     6781 tggaggcaga tcgaagtttt gctgcaaaaa ggcctggtgc atatcgtcaa gatggtcaaa
     6841 ggcgaccaca ggtgctttca ataatgccga acgcgttacg ccgttaggga aatatttttc
     6901 ggcaaacggt tttgagctga cgaacagata gtcaagcgca ccgagcttat cgacaaggca
     6961 actcggcagc gcctgatgtt gaatactcac cgcgccgacc acttcgccgc ggcgcagacg
     7021 ttcctgagta cgggtttcat cttctacctg caagttgagg cggataggcg aatcagccaa
     7081 tacaggagcc agtgccggaa gcaaccacgt cgccagactg tcggcgttga ccgccagtga
     7141 aagcagcagc ggagtcgaac cggtttgttc atcgcccagc cactcttctt ccagcaactc
     7201 cacctggcgc agcagtgcca gcagtttttg cccttgttcc gtcgggcgcg gcggtacggt
     7261 acgcaccaac agcggctgcc cgaacatatt ttccagttgc ttaatgcgct gtgagacggc
     7321 tgattgtgta atgcacagct tttgtgccgc gcgctcaaat cctcgttcac gtatcaccgc
     7381 atccagtgcc tgtaatgttc tgtagtccgg gcgtttcatt gctgttgtct gctcctggta
     7441 aatgcttttt cctgcactat gacacaattt tgtgtcaggt tgcatatacc gcagccgtcg
     7501 gcgggtaaca tttgtatcaa tggttaaacg cgcagcttaa aagatcaggg atttgcgcta
     7561 ttgcatttcg cttagcgact tcgcgccctg gttatgttga atggcgtggc gttattgcct
     7621 ctgttcgcac cgtggagcgg catacccaga ccgttgtatg ctttatttgc ggggcgaaag
     7681 gggatgcccg ccattgcgcg atattttatg gatgagttaa ccacccggct tgccaacggg
     7741 gtctgaatcg ctttttttgt atataatgcg tgtgaaattt cataccacag gcgaaacgat
     7801 catgacgcag gatgaattga aaaaagcagt aggatgggcg gcacttcagt atgttcagcc
     7861 cggcaccatt gttggtgtag gtacaggttc caccgccgca cactttattg acgcgctcgg
     7921 cacgatgaaa ggccagattg aaggggccgt ttccagttca gatgcttcca ctgaaaaact
     7981 gaaaagcctc ggcattcacg tttttgatct caacgaagtc gacagccttg gcatctacgt
     8041 tgatggcgca gatgaaatca acggccacat gcaaatgatc aaaggcggcg gcgcggcgct
     8101 gacccgtgaa aaaatcattg cttcggttgc ggaaaaattt atctgtattg ccgacgcctc
     8161 caagcaggtt gatattctgg gtaaattccc gctgccagta gaagttatcc cgatggcacg
     8221 tagtgcagtg gcgcgccagc tggtgaaact gggcggtcgt ccggaatacc gtcagggcgt
     8281 ggtgaccgat aatggcaacg tgatcctcga cgtccacggc atggaaatcc ttgacccgat
     8341 agcgatggaa aacgccataa atgcgattcc tggcgtggtg actgttggct tgtttgctaa
     8401 ccgtggcgcg gacgttgcgc tgattggcac acctgacggt gtcaaaacca ttgtgaaatg
     8461 atctgacggg ggaacctccc ccgttaaaaa aattctcttc attaaatttg gtgacatgtg
     8521 tcacgttttt acctggctat tgtcgattgc tctaaataaa tcctctaaac cagcatattc
     8581 aaccaagaaa tacctttgcg tgatatttcc tcaacatcgc gacgcaaacg ttcatattgc
     8641 cgcaatatta ttttttgata tgttgaaagg cggatgcaaa tccgcacaca acatttcaaa
     8701 gacaggattg ggtaaatggc aaaggtatcg ctggagaaag acaagattaa gtttctgctg
     8761 gtagaaggcg tgcaccaaaa ggcgctggaa agccttcgtg cagctggtta caccaacatc
     8821 gaatttcaca aaggcgcgct ggatgatgaa caattaaaag aatccatccg cgatgcccac
     8881 ttcatcggcc tgcgatcccg tacccatctg actgaagacg tgatcaacgc cgcagaaaag
     8941 ctggtcgcta ttggctgttt ctgtatagga acaaaccagg ttgatctgga tgcggcggca
     9001 aagcgcggga tcccggtatt taacgcaccg ttctcaaata cgcgctctgt tgcggagctg
     9061 gtgattggcg aactgctgct gctattgcgc ggcgtgccgg aagccaatgc taaagcgcac
     9121 cgtggcgtgt ggaacaaact ggcggcgggt tcttttgaag cgcgcggcaa aaagctgggt
     9181 atcatcggct acggtcatat tggtacgcaa ttgggcattc tggctgaatc gctgggaatg
     9241 tatgtttact tttatgatat tgaaaataaa ctgccgctgg gcaacgccac tcaggtacag
     9301 catctttctg acctgctgaa tatgagcgat gtggtgagtc tgcatgtacc agagaatccg
     9361 tccaccaaaa atatgatggg cgcgaaagaa atttcactaa tgaagcccgg ctcgctgctg
     9421 attaatgctt cgcgcggtac tgtggtggat attccggcgc tgtgtgatgc gctggcgagc
     9481 aaacatctgg cgggggcggc aatcgacgta ttcccgacgg aaccggcgac caatagcgat
     9541 ccatttacct ctccactgtg tgaattcgac aacgtacttc tgacgccaca cattggcggt
     9601 tcgactcagg aagcgcagga gaatatcggc ctggaagttg cgggtaaatt gatcaagtat
     9661 tctgacaatg gctcaacgct ctctgcggtg aacttcccgg aagtctcgct gccactgcat
     9721 ggtggtcgtc gtctgatgca catccacgaa aaccgtccgg gcgtgctaac tgcgctgaac
     9781 aaaatcttcg ccgagcaggg cgtcaacatc gccgcgcaat atctacaaac ttccgcccag
     9841 atgggttatg tagttattga tattgaagct gacgaagacg ttgccgaaaa agcgctgcag
     9901 gcaatgaaag ctattccggg taccattcgc gcccgtctgc tgtactaatt ccccttctct
     9961 gaaaattaac gggcaggtca ctgacttgcc cgttttttta tcccttctcc acaccgttgc
    10021 cgcgttgcgc attctacttt gcgagtctgc tccagaaaat aaatcaaagt cagatcaatg
    10081 cgttgtgttt atttaatggg gatttacgat ggcgggacag tatggggctg taacggtaaa
    10141 gccctcaccg aagcgagggc ttaaaggaga agggttatga tgcgacttgt catcatactg
    10201 attgtactgt tactgataag tttcggagct tattaacagt cagtctctgg ggaggagtca
    10261 tcctccctta cccttactca ctaaattagg tcaaagaatc aacgatgtca atcagggcga
    10321 tgcggggtgc atcgccctga accgaacttt ttgatagcca cttcatcgcc cacgtttact
    10381 gccgtaatag atcctttttc ccaaaaatta tctctgtttt gcatggggtt tttcgaacac
    10441 gctcgaagaa aagatttaaa ggtagatcaa tgcgttgtgg ttatttaaag agagcttacg
    10501 atagctgggc agcatggggc tgtaacggta aagccctcac cgaagcgagg gcttgaagga
    10561 gaagggttat gatgcgactt gccatcatac tgattgtact gttactcata agtttcccag
    10621 cttattaaca gtcagtcaca ggggaggagc aatcctccct tacccttact cactaaatta
    10681 ggttaaagaa tcaacgatgt caatcagggc gatgcaggtg tatcgccctt accactccca
    10741 gactttcgac ggtgtaacca ccgcaggaag agggatatcc cactcttcaa cggggagttt
    10801 ttccaccaac tgacaatcat gcgcataacc caccggttgc gttttatagt gctgccagtt
    10861 ttgtaaggtc cgatcataaa aaccaccgcc cattcccagg cgctgaccgt actcatcaaa
    10921 ggcgaccagc ggtgtgatca gcacgtctaa tcgggaaagg ggtagcacgt cacgcacatc
    10981 cagttttggc tcatggattt tcaacctgtt catcaccagt tcgctttgcg gatggtaatt
    11041 caggaacagc aaattaccag cactaaaggg atgcaaaact ggaagatata cgcgcttacc
    11101 ggcgcgccag agttgttcta ttagcggctg ggtgtcgagt tcaccatcaa aagagaggaa
    11161 tacagcgacc gtatgcgcca tcaccaccgg gggataagtc atcatccggg tagcggcttg
    11221 ttgacccatt tcctgctgtt gttccggcgt taacgcacga cgacgttgcc gaatcatttt
    11281 gcggatttct tgtcgggata atgtcagtgg gagttctggt agttgcgtca tggctggtgc
    11341 cagataagaa gggaatctcc gagatgccgc cgcaggctgt aacccttgaa cccttggttc
    11401 aaggtgaatg tgtcgtcgca gttttaaggc ttctcggacg gaccgagcat gctcaccaac
    11461 cgcggagcgc cacattcttg tggtatgaaa tatcggctca ggggactggc ccgcttgcga
    11521 acatctcaga gaaattttgt cttcacggtt actctaccac agtaaaccga aaagtgtcat
    11581 tcaaagtttt ggttagtttt ttcggtgatg cgaccttgtt caagtaacgc ttgttctatg
    11641 gtctgctgca gcatccgaat acgctgttcc atacttgccg cgtagtcacg agtcttcgct
    11701 ttttcttgcg ctaactcata gctgatattc aatgcggcaa tgaagaccaa ctgttcagta
    11761 tttgtgactc tagtgcgttc tttcagatct tgcaaccgtt ggttcagatc gtccgctgcc
    11821 tgattcaacg catccctttg gtcaggcggg cagttcacac gcagtgaacg gccaaaaatt
    11881 tggatatcga cgggttgtgc agacatgcca ccttcctgct gattgactgc gctgccttcg
    11941 tctttagacc catggtctgc gaaggggcga cactatagct accctgatga gaagagacaa
    12001 gcccttttct ggtccaccag ggcccaaagt ggtagcatat catgaatatt cctccctttg
    12061 acgacgaatg cttatgtcta tacagaacga aatgcctggt tacaacgaaa tgaaccagta
    12121 tctgaaccaa caagggacgg gtctgacccc tgccgagatg catggtttaa tcagtgggat
    12181 gatatgtggc ggtaacgatg acagctcatg gctgccgcta cttcacgacc tgacgaacga
    12241 aggcatggct ttcggtcatg agctggcaca ggcactgcgt aaaatgcact ctgccaccag
    12301 cgatgccctg caggatgacg gcttcctttt tcagctttat ctgcctgatg gcgatgatgt
    12361 cagcgttttc gatcgggctg atgcattggc aggttgggtc aatcacttcc tgcttggtct
    12421 tggcgttacg caaccgaagc tggataaagt gaccggcgaa accggtgaag ctatcgacga
    12481 tctgcgtaac attgcgcaac tgggttacga cgaagacgaa gatcaggaag agcttgaaat
    12541 gtcgcttgaa gagatcatcg aatacgttcg tgttgccgcg ctgttatgcc acgacacctt
    12601 tactcatccg caaccgaccg cgccagaagt acaaaaaccg actctacact aaaaacaaaa
    12661 aacgtaagga gagtgttatg agtgagatat cccggcaaga gtttcagcgt cgccgtcagg
    12721 ccctggtgga gcaaatgcaa cccggcagcg ccgcgctgat ttttgctgca ccagaagtaa
    12781 cacgtagcgc cgacagcgaa tacccctatc gtcagaacag tgacttctgg tacttcaccg
    12841 gctttaacga accggaagcg gtgctggtgc tgattaaaag cgatgacact cataaccaca
    12901 gcgttctgtt taaccgcgtt cgcgacctga cggcggagat ctggtttggc cgtcgcttag
    12961 gccaggatgc cgcgccagag aaactgggcg ttgaccgcgc actggcattc agcgaaatca
    13021 atcagcaact ttatcaacta cttaacggcc tggatgtggt ttaccatgcc cagggcgaat
    13081 atgcatatgc tgatgaaatc atgaacagtg cgctggaaaa actgcgtaaa ggttcgcggc
    13141 aaaatctcac cgcaccggca acgatgatcg actggcgtcc tgttgttcat gaaatgcgcc
    13201 tgttcaaatc gccagaagag attgccgtac tccgccgcgc gggagaaatc accgccatgg
    13261 cacatacacg ggcgatggaa aaatgccgtc cgggaatgtt cgagtaccat ctggaaggcg
    13321 aaattcacca cgaatttaac cgccacggtg cgcgctatcc gtcctataac accattgtcg
    13381 gcagcggtga aaacggctgc attctgcact acaccgaaaa cgagagtgaa ctgcgcgacg
    13441 gtgacctggt gttgattgac gcgggttgtg aatacaaagg ttacgcgggc gatattaccc
    13501 gcaccttccc ggtcaacggc aaattcaccc aggcccagcg tgaaatctac gacattgtgc
    13561 tggagtctct cgaaaccagc ctgcgcctgt atcgtccggg aacttccatt ctggaagtca
    13621 ctggtgaagt ggtgcgcatc atggttagcg gcctggtaaa actcggcatt ctgaaaggtg
    13681 atgttgatga actgatcgct cagaatgccc atcgtccttt ctttatgcat ggccttagcc
    13741 actggttagg gctagatgtc catgacgttg gcgtttatgg tcaggatcgc tcgcgcattc
    13801 tggaaccggg catggtactg accgtagagc cagggctgta tattgcgccg gatgcagaag
    13861 tgccagaaca atatcgcggt atcggcattc gtattgaaga cgacattgtg attaccgaaa
    13921 ccggtaacga aaacctcacc gccagcgtgg tgaaaaagcc ggaagaaatc gaagcgttga
    13981 tggctgctgc gagaaagcaa tgagcgtaat catcgtcggt ggcggcatgg cgggcgcgac
    14041 gctggcgctg gctatttccc ggttaagtca cggggcgctg ccggtacatt tgattgaagc
    14101 gactgcgcca gagtcacatg ctcatccggg ctttgatgga cgagcgatag cgctggcggc
    14161 gggtacctgt cagcaactgg cgcgcatcgg cgtctggcaa tctctggcgg attgcgcaac
    14221 tgccatcacc accgtgcatg tcagcgatcg tggtcacgct ggatttgtca ccctcgccgc
    14281 agaagattac caactggcgg cgctgggaca ggttgtcgaa ttgcacaatg tcgggcaacg
    14341 gctgtttgca ttgctgcgta aagcacctgg cgtaacgctg cattgccctg atcgcgtggc
    14401 taacgttgcc cgtactcaga gtcacgttga agtgacgctg gagagtggcg agacgctgac
    14461 gggccgcgtg ctggtagcag ctgatggcac ccattcagcg ttagccaccg cgtgcggcgt
    14521 tgactggcag caggagcctt acgaacaact ggccgtgatt gccaacgttg cgacttccgt
    14581 tgcgcacgaa ggccgcgctt ttgaacgctt cacgcaacat ggcccgctgg cgatgttgcc
    14641 gatgtctgac ggacgctgtt cgctggtctg gtgtcatcca ctggaacggc gcgaagaggt
    14701 gctgtcgtgg agcgacgaga agttttgccg tgaactccag tcggcctttg gctggcgact
    14761 tggaaaaatt acccacgccg gtaaacgcag tgcttatccg ctggcgttaa cccgcgccgc
    14821 cagagctatt acccatcgta ccgtgctggt gggcaatgcg gcgcaaactc tgcacccgat
    14881 tgccgggcaa gggtttaacc tcggtatgcg agatgtcatg agccttgcgg aaaccctgac
    14941 tcaggcgcat gagcgcggag aagacatcgg tgattacggc atattgtgcc gctatcagca
    15001 gcgtcgacag agcgatcgcg aagcaaccat cggcgtcacg gacagcctgg tacatctttt
    15061 tgccaaccgt tgggcaccgc tggttgtcgg gcgcaacatc ggactgatga cgatggaatt
    15121 attcaccccg gcacgcgatg tgctggcgca gcgcaccctc ggttgggtgg cgcgttgaag
    15181 gcggttttaa ggaataaaca atgcaatgtg ttgatgtagc cattgttggt ggcggcatgg
    15241 tggggctggc ggttgcctgc ggcttacagg ggagcggctt acgcgttgcc gtactggagc
    15301 agcgcgtacc ggaacctctg gcggcggatg caccaccaca actgcgcgtt tcggctatca
    15361 atgccgccag cgaaaaatta ctcacccgtc ttggcgtctg gcaggacatt ctctctcgta
    15421 gggccagttg ttatcacggt atggaagtgt gggacaaaga cagttttggt cacatttcgt
    15481 ttgacgatca aagcatgggc tatagccatc ttgggcatat cgttgaaaac tcagtgattc
    15541 actacgcgct gtggaacaaa gcgcagcagt cgtcagatat cactctgttg gcccccgcag
    15601 aattacagca ggtcgcctgg ggagaaaatg aaactttcct gacgctgaaa gatggcagca
    15661 tgttaacggc gcgtctggtg attggcgcgg acggtgctaa ttcctggttg cgcaacaaag
    15721 cagatatttc gctgactttc tgggattatc agcatcacgc gctggtagcg accattcgca
    15781 cggaagaacc gcatgatgcg gtggcgcggc aggttttcca tggcgaaggc attctggcct
    15841 ttttaccgct tagcgatccg catctttgct caattgtctg gtcactgtcg ccagaggaag
    15901 cgcagcggat gcagcaggca agtgaagatg aatttaatcg cgcgttaaat atcgcttttg
    15961 ataatcgcct gggcttatgc aaggttgaga gcgcgcgtca ggtgttccca ctgacggggc
    16021 gttatgcgcg ccagtttgcc gcgcaccgtc tggtgctagt gggcgacgcc gcgcatacca
    16081 ttcacccgct ggcggggcag ggagtaaatc tcggctttat ggatgctgca gagctgattg
    16141 ctgaactgaa acggttgcat cgtcagggga aagacatcgg gcagtacatt tacctgcgcc
    16201 ggtatgagcg tagccgcaag cacagtgcgg cgctgatgct ggctggtatg cagggattcc
    16261 gcgatctgtt ttccggtacc aatccggcga aaaaactgct gcgtgatatt ggtttgaaac
    16321 tggccgatac gcttcctggc gttaaaccac aacttatccg ccaggcaatg ggattaaacg
    16381 atttgcctga atggctgcgt taaaaatttc tcttctgctg tttatttgat acccatcaca
    16441 ctttcatctc ccggtttttt cgccgggaga ttttcctcat ttgaaataaa ctaatttcac
    16501 ctccgttttc gcattatatt ttctaatgtc attatttttt gatttagtgt tttttgacat
    16561 ttttttagct cttaatattg ccttattcaa attagatttc taatggcatc atctttatat
    16621 agaaactggt gtgttttttg gttttttatt ctgtcgcgat tttggcgttt tttaaccata
    16681 agctaatgtg atgatcaatt ttaccttatg gttaacagtc tgtttcggtg gtaagttcag
    16741 gcaaaagaga acgattgcgt tggggaccgg gagtggctcc gatgctgggt ttcgtggtga
    16801 taatttcacc atgaaaagtt gtcagccccg cttattcaat gaggacaaga tggcacaaca
    16861 gactcctttg tacgaacaac acacgctttg cggcgctcgc atggtggatt tccacggctg
    16921 gatgatgccg ctgcattacg gttcgcaaat cgacgaacat catgcggtac gtaccgatgc
    16981 cggaatgttt gatgtgtcac atatgaccat cgtcgatctc cgcggcagcc gcacccggga
    17041 gtttctgcgt tatctgctgg cgaacgatgt ggcgaagctc accaaaagcg gcaaagccct
    17101 ttactcgggg atgttgaatg cctctggcgg tgtgatagat gacctcatcg tctactactt
    17161 tactgaagat ttcttccgcc tcgttgttaa ctccgccacc cgcgaaaaag acctctcctg
    17221 gattacccaa cacgctgaac ctttcggcat cgaaattacc gttcgtgatg acctttccat
    17281 gattgccgtg caagggccga atgcgcaggc aaaagctgcc acactgttta atgacgccca
    17341 gcgtcaggcg gtggaaggga tgaaaccgtt ctttggcgtg caggcgggcg atctgtttat
    17401 tgccaccact ggttataccg gtgaagcggg ctatgaaatt gcgctgccca atgaaaaagc
    17461 ggccgatttc tggcgtgcgc tggtggaagc gggtgttaag ccatgtggct tgggcgcgcg
    17521 tgacacgctg cgtctggaag cgggcatgaa tctttatggt caggagatgg acgaaactat
    17581 ttctccttta gccgccaaca tgggctggac tatcgcctgg gaaccggcag atcgtgactt
    17641 tatcggtcgt gaagccctgg aagtgcagcg tgagcatggt acagaaaaac tggttggtct
    17701 ggtgatgacc gaaaaaggcg tgctgcgtaa tgaactgccg gtacgcttta ccgatgcgca
    17761 gggcaaccag catgaaggca ttatcaccag cggtactttc tccccgacgc tgggttacag
    17821 cattgcgctg gcgcgcgtgc cggaaggtat tggcgaaacg gcgattgtgc aaattcgcaa
    17881 ccgtgaaatg ccggttaaag tgacaaaacc tgtttttgtg cgtaacggca aagccgtcgc
    17941 gtgatttact tttttggaga ttgattgatg agcaacgtac cagcagaact gaaatacagc
    18001 aaagaacacg aatggctgcg taaagaagcc gacggcactt acaccgttgg tattaccgaa
    18061 catgctcagg agctgttagg cgatatggtg tttgttgacc tgccggaagt gggcgcaacg
    18121 gttagcgcgg gcgatgactg cgcggttgcc gaatcagtaa aagcggcgtc agacatttat
    18181 gcgccagtaa gcggtgaaat cgtggcggta aacgacgcac tgagcgattc tccggaactg
    18241 gtgaacagcg aaccgtatgc aggtggctgg atctttaaaa tcaaagccag cgatgaaagc
    18301 gaactggaat cactgctgga tgcgaccgca tacgaagcat tgttagaaga cgagtaacgg
    18361 ctttattcct cttctgcggg agaggatcag ggtgaggaaa atttatgcct caccctcact
    18421 ctcttcgtaa ggagagaggt tcacaattca ctgcacgttt caggaaccat cgctcatgac
    18481 acagacgtta agccagcttg aaaacagcgg cgcttttatt gaacgccata tcggaccgga
    18541 cgccgcgcaa cagcaagaaa tgctgaatgc cgttggcgca caatcgttaa acgcgctgac
    18601 cggccagatt gtaccgaaag atattcagct tgcgaccccg ccgcaggttg gcgcaccggc
    18661 gaccgaatac gccgcactgg cagaactcaa ggctattgcc agtcgcaata aacgcttcac
    18721 gtcttacatc ggcatgggtt acaccgccgt gcagctaccg ccggttatcc tgcgtaacat
    18781 gctggaaaat ccgggctggt ataccgcgta cactccgtat caacctgaag tctcccaggg
    18841 ccgccttgaa gcactgctca acttccagca ggtaacgctg gatttgactg gactggatat
    18901 ggcctctgct tctcttctgg acgaggccac cgctgccgcc gaagcaatgg cgatggcgaa
    18961 acgcgtcagc aaactgaaaa atgccaaccg cttcttcgtg gcttccgatg tgcatccgca
    19021 aacgctggat gtggtccgta ctcgtgccga aacctttggt tttgaagtga ttgtcgatga
    19081 cgcgcaaaaa gtgctcgacc atcaggacgt cttcggcgtg ctgttacagc aggtaggcac
    19141 taccggtgaa attcacgact acactgcgct tattagcgaa ctgaaatcac gcaaaattgt
    19201 ggtcagcgtt gccgccgata ttatggcgct ggtgctgtta actgcgccgg gtaaacaggg
    19261 cgcggatatt gtttttggtt cggcgcaacg cttcggcgtg ccgatgggct acggtggccc
    19321 acacgcggca ttctttgcgg cgaaagatga atacaaacgc tcaatgccgg gccgtattat
    19381 cggtgtatcg aaagatgcag ctggcaatac cgcgctgcgc atggcgatgc agactcgcga
    19441 gcaacatatc cgccgtgaga aagcgaactc caacatttgt acttcccagg tactgctggc
    19501 aaacatcgcc agcctgtatg ccgtttatca cggcccggtt ggcctgaaac gtatcgctaa
    19561 ccgcattcac cgtttgaccg atatcctggc ggcaggcctg caacaaaaag gtctgaagct
    19621 gcgccatgcg cactatttcg acactctgtg tgtggaagtg gccgacaagg cgggcgtact
    19681 ggcgcgtgcc gaagcggctg aaatcaacct gcgtagcgat atcctgaacg cggttgggat
    19741 cacccttgat gaaaccacca cgcgtgaaaa cgtaatgcag cttttcagcg tgctgctggg
    19801 cgataaccac gggctggaga tcgacacgct ggacaaagac gtggctcacg acagccgctc
    19861 tattcagcct gcgatgctgc gcgacgacga aatcctcact catccggtgt ttaatcgcta
    19921 ccacagcgaa accgaaatga tgcgctatat gcactcgctg gagcgtaaag atctggcgct
    19981 gaatcaggcg atgatcccgc tgggttcctg caccatgaaa ctgaacgccg ccgccgagat
    20041 gatcccaatc acctggccgg aatttgccga actgcacccg ttttgcccgc cggaacaggc
    20101 tgaaggttat cagcagatga ttgcgcagct ggctgactgg ctggtgaaac tgaccggtta
    20161 cgacgccgtt tgtatgcagc cgaactccgg cgcacagggc gaatacgcgg gcctgctggc
    20221 gattcgtcat tatcatgaaa gccgcaacga agggcatcgc gatatctgcc tgatcccggc
    20281 ttctgcgcac ggaactaacc ccgcttctgc acatatggca ggaatgcagg tggtggttgt
    20341 ggcgtgtgat aaaaacggca acatcgatct gactgatctg cgcgcgaaag cggaacaggc
    20401 gggcgataac ctctcctgta tcatggtgac ttatccctct acccacggcg tgtatgaaga
    20461 aacgatccgt gaagtgtgtg aagtcgtgca tcagttcggc ggtcaggttt accttgatgg
    20521 cgcgaacatg aacgcccagg ttggcatcac ctcgccgggc tttattggcg cggacgtttc
    20581 gcacctcaac ctgcataaaa ctttctgcat tccgcacggc ggtggtggtc cgggtatggg
    20641 accgatcggt gtgaaagcgc atctggcacc gtttgtaccg ggtcatagcg tggtgcaaat
    20701 cgaaggcatg ttaacccgtc agggcgcagt ttctgcggca ccgttcggta gcgcctctat
    20761 cctgccaatc agctggatgt acatccgcat gatgggcgca gaagggctga aaaaagcaag
    20821 ccaggtggca atcctcaacg ccaactatat tgccagccgc ctgcaggatg ccttcccggt
    20881 gctgtatacc ggtcgcgacg gtcgcgtggc gcacgaatgt attctcgata ttcgcccgct
    20941 gaaagaagaa accagcatca gcgagctgga tattgccaag cgcctgatcg actacggttt
    21001 ccacgcgccg acgatgtcgt tcccggtggc gggtacgctg atggttgaac cgactgaatc
    21061 tgaaagcaaa gtggaactgg atcgctttat cgacgcgatg ctggctatcc gcgcagaaat
    21121 tgaccaggtg aaagccggtg tctggccgct ggaagataac ccgctggtga acgcgccgca
    21181 cattcagagc gaactggtcg ccgagtgggc gcatccgtac agccgtgaag ttgcggtatt
    21241 cccggcaggc gtggcagaca aatactggcc gacggtgaaa cgtctggatg atgtttacgg
    21301 cgaccgtaac ctgttctgct cctgcgtacc gattagcgaa tacctgtaat tcactgattc
    21361 gactattttc taaaggcgct tcggcgcctt tttagtcaga tgacaaagta caaaagtgct
    21421 cagacagtcc cctcgcccct ttggggagag ggttagggtg aggggaacag gccggcactg
    21481 gcgcgaatat ttaccctcac cccggccctc tccctgaaag ggcgagggga aaagcgtgcc
    21541 aacattgaag attgagccag tttgttagca atctcaaaga tacgtcaacg aattaatttt
    21601 tctcggaaaa acaaatggct atagcacttg tgaccggtgg cagtcgcggc atcgggcggg
    21661 caactgcatt actgttggcg aaagaagagt atacggtggc ggttaattat caacaaaacc
    21721 tccatgcggc gcaggaagtg gtgaacttaa tcacgcaagc cggtggcaag gcattcgtgc
    21781 tccaggcgga tatcagcgac gaaaatcagg tcatcgcaat gtttacagca atcgatcagc
    21841 acgatgaacc gctagcagcg ctggtcaata acgccgggat cttgtttacc cagtgcaccg
    21901 ttgaaaacct taccgcagag cgaatcaacc gagtactttc caccaacgtg acgggatatt
    21961 ttctctgctg ccgcgaggcg gtaaaacgca tggcgcttaa aaatggtggc agtggcggcg
    22021 ctatcgtcaa tgtctcttcg gtggcctcac ggttgggttc gccaggggaa taggttgatt
    22081 acgcggcatc gaaaggggcg attgatacgt taaccaccgg actatcgctg gaagtcgccg
    22141 cgcaggggat ccgcgttaac tgcgtgcggc cagggtttat ttataccgaa atgcacgcca
    22201 gcggcggcga gcttggacgc gtcgatcgcg ttaagtcgaa catccccatg cagcgtggtg
    22261 gacaggcaga agaggtcgcg caggccattg tctggctact aagtgataaa gcctcttacg
    22321 tcacgggaag ttttatcaat ttggcgggcg ggaaataaaa cagggaagtt gtctgaccgg
    22381 atgcaacaag tattgcatcc ggtacttcat cgacttaaag cttctcgccg ttgctggcaa
    22441 tcacctcttt gtaccagtta aagctcttct tacgtgaacg cgacatatcg ccagtaccgt
    22501 cgtcatgttt attcacatag ataaagccgt agcgtttgct gtactgcccg gtagtgaatg
    22561 acacgcagtc gatgcagccc cacggtgtgt agcccatcag atccacacca tcgtaagtca
    22621 ctgctttttt catctcttca atatgggcgc gcaggtagtc aatgcggtag tcgtcgttga
    22681 tgctgccatc ttcttccact ttgtcgtaag cgccaaaacc gttttcgaca ataaacagcg
    22741 gcctctgata acgctcatac agttcgcaaa gggcatagcg cagacctact ggatcaatct
    22801 gccagcccca gtcagacgct ttaacatacg ggttcggtac gctgccttca aaaccagaga
    22861 tcgcatcgcc ggtgccgcct tcggccttca ctgcgttgat catgtaatag ctgaaaccaa
    22921 gataatcgca ggtgccttca cgcagtacat ccagatcgcc atcttccatt ttgatgttaa
    22981 atccgcgacg ctcccactcg ttcaacacat aggacgggta atagccgcgt agctgcacat
    23041 cggtaaagac gtagcgttcg cgcatcgact cctgagcgaa catcacatcg tccgggttac
    23101 aggagtaagg atagagcggc accatcgcca gcatacagcc gactttcatc tccgggttaa
    23161 tgcgacgcgc ggctttcact gctagggcgc tggcgacaaa ctggtgatgc agcacctggt
    23221 acatcgtctc ttccgggttg tcatgctcgg tatacaccac gccggagcag cagtaaccaa
    23281 acagcggcgc acgccagtta cgctggttgt ttatttcgtt gaaggtcatc cagtatttga
    23341 ctttatgctt gtagcgttcg aataccactt ccgcgaaacg gacaaagaaa tcaacgactt
    23401 tacggttggt ccagctaccg tattgctgca ccagatgcag cggtatttca aagtgggaga
    23461 gggttatcac cggttcgatg ttgtatttca gcagttcatc gaacagagag tcgtaaaact
    23521 tcagcccttc ttcgtttggc tgagcttcat caccttttgg aaaaatacgc gtccaggcga
    23581 tggaagtccg aaaacatttg aagcccattt cggcaaatag cttgatgtct tccttgtagt
    23641 gaccataaaa atcaacggct tcatggtttg gatagtattt tcctggcaag acttctttgg
    23701 tgatttcgcg cggcacgccg tgtgcgccac cggtcagaac gtcacaaatg ctcggtcctt
    23761 tgccgccttt gttccagccg ccttcgacct gatgagcggc aacggcgcca ccccataaga
    23821 aatctttcgg taaggtgagt tttttcacta tcataggctc cagatgagtc aattcttaca
    23881 ggaaatagta ccatgcagcc aaacgacatc actttttctc aacgtttcca ggatgacatt
    23941 ctggctgggc gtaaaaccat caccatccgc gacgagtctg aatcgcactt caaaacgggt
    24001 gatgtgcttc gtgtcggacg ttttgaagat gacggttatt tttgcacgat tgaagtcacc
    24061 gcaacctcaa ccgtaacgct ggatacgctg acggaaaaac atgcagagca ggaaaatatg
    24121 accctgactg aactgataaa ggtcattgcc gacatctatc ccggtcagac acagttttat
    24181 gtgattgaat ttaaatgtct ttaaattgaa ctcacgcctg ttagttgaaa tttctcattt
    24241 aatttcatga tttttaggag attagtctca aatcagaatt tattttagct aacaggtgtt
    24301 cactggaact attctcagtt acgctggaga ggtatacatg tgcgtgtacg tttctccgga
    24361 gtaagttatg gttcagaagc ccctcattaa gcagggatat tcgctggcag aggaaattgc
    24421 caacagcgtc agtcacggca ttgggttggt gtttggtatc gttgggctgg tgttgctact
    24481 ggttcaggcg gtggatctca atgccagcgc cacagcgata accagctaca gcctctatgg
    24541 cggcagtatg atcctgctgt tcctcgcttc gacgctctat cacgccattc ctcatcaacg
    24601 ggcaaaaatg tggctgaaga aatttgacca ttgcgctatt tacctgttga ttgccggaac
    24661 ctacacgccg tttttgctgg tggggctgga ttctccgtta gcgcgcgggt tgatgattgt
    24721 tatctgaagc ctggcattgc tggggattct gtttaaactg accatcgcgc accgattcaa
    24781 aattttatct ctggtgacct atctggcgat gggctggctg tcgctggtgg taatttatga
    24841 aatggcagtt aagctcgcgg cgggcagcgt taccttactg gcggtaggcg gcgtggttta
    24901 ttcgctcgga gtgattttct atgtctgcaa acgcattccc tacaatcatg ccatctggca
    24961 cggcttcgtg ctcggcggca gtatgtgcca ctttctggcg atctatttgt atattgggca
    25021 ggcgtaatgg gtatgccttt gtaggcctga taagacgcgc cagcgtcgca tcaggcatcg
    25081 gagcgcaacc gccggatgcg gcgtgaacgc cttatccgat ctacgggcct cgtccctgtt
    25141 gtgataaagg catcaaatcc cagacatgat aagacgcgtc agcgtcgcat caggcgataa
    25201 atgcctgatg cgatacagag atttactctt cgagtgaata cggcagcggc tcgatatgca
    25261 gtgtattcgc atcgtcgcgt acgcggaaga tgctgtccgg ttccatatcg ttattcatga
    25321 cgacctgtac cacgacctga ccatcttcca gttttaccgc agccagcacc gtaccggtac
    25381 gacgccagtt ctcgcccatt ttcagctcta agtcttcacc agcttccggc agtcggctgg
    25441 cgctacctgc cagcaaccag agcgcacgtt tattggcacc acggaatttt gctcgcgcca
    25501 ccatctcttg tccggtataa cagcctttct taaaactgat accgcccagc gcctggagat
    25561 tggtcgcctg tgggataaac tgcccgctgt tcgcggcatc aatcaccggg aaacccgctt
    25621 caatgtttaa tgccagccac tgttggctat tgttcagttc cgcttcaccg cgcagtttat
    25681 cggtcagcat attggcagta gcttcatcgg ttacgatcag gaaacgttct gccgggtgtt
    25741 caaaccatag caaagtggtc gcgccttctt taactacctg tttttctctc gaaggtagtt
    25801 cactaaagag attggcgagc gcggcgcgcg cctgaaaacc ggcaacacca agcagcacac
    25861 gctcgtcgtc tgccgcgatg gtcactttag agaacaccgc atattttttc agttcagtca
    25921 gctgcggttc acgcacgctg cgccgttcaa tccacgcaaa gccatcgccg tcgcggaaca
    25981 gacgtaaatt gctccacatt ttacctttgg cgtcgcaatg ggcggcgagc aggtgctgat
    26041 tttctgtcat ctggctgaca tctgctgtca cctgaccctg catatatttt tcgctgtccg
    26101 cgccagtaat ggtggcaagc gcccagtcat caagcgtcat cagcgtcagc ggtaaacggg
    26161 cagaagccgt aggctgacgg ggaggaaaag gtgtaaaagc cataatagag tcctgagttg
    26221 cttaacggcg tattaataac taatggtaaa agagctatga ggcaatgcaa gtgctttcac
    26281 tacgcgatct gtgccttctg cgaggcgact tccaaaaaaa tgaagctctt gaattgttgt
    26341 gaattaattt cgcgatcgcg atggtgttta ctgatattcc cgtaaaagaa gtcgaaaaac
    26401 acgttacaat agccgggtac tggattttcg tgagacagga agaagatgga cattaacaac
    26461 aaagcccgca ttcattgggc atgccgccgt ggtatgcgcg aactcgatat ttcaatcatg
    26521 ccgtttttcg aacatgagta cgacagctta agcgatgacg aaaaacgcat ctttattcgt
    26581 ctgctggaat gtgacgatcc ggacctgttt aactggctga tgaatcacgg taaaccggcc
    26641 gatgcagaac tggaaatgat ggtccgactc atccagacac ggaaccggga acgtggtcct
    26701 gtggcaatct gatttgcgcg tctcctggcg cgcacagtgg ctttccttgc tgattcatgg
    26761 gctggttgcc gctgttattt tactcatgcc ctggccgctc agttacaccc cgttatggat
    26821 ggtgttactt tcgctggtgg tatttgattg cgttcgcagc cagcggcgta ttaatgctcg
    26881 ccagggggaa attcgattgt tgatggacgg gcgtttgcgt tggcaagggc aggagtggag
    26941 catcgtcaaa gcaccgtgga tgattaagag cggcatgatg ctgcgtttac gttctgatgg
    27001 cggtaaacgg caacatttat ggctggcagc cgacagcatg gacgaagctg aatggcggga
    27061 tttacggcgg attttgttgc aacaagagac gcaaagataa atatgacggc aaagcatatg
    27121 cgctaagccg tcagtgagat caggcgtaat gctctgccat ttcgttgagg atttgctcgc
    27181 accagctctg aatacgctcg tcgctaaggt catactggtt agtttcatcc agcgccagac
    27241 ccacgaacag ttgcccgtca gcaatcaccg gtttcgggct ggtaaattca tatccttccg
    27301 ttggccagta gccgacgaac ttcacgcctt tggtcgagag tttgtcatgc agcataccga
    27361 gcgcatcgag gaaccactcg ccgtatccca gttgatcgcc aagcccatac agcgcaacaa
    27421 ttttaccttc aaggttcagg tcgtcgagct gatcccagac ggcttcccag tcttcctgga
    27481 tttcgccaaa atcccaggtc gggataccca gaatgagcac atcgtactgc tccattaatt
    27541 tcggggagtc gtccttgagg ttatgtaagg tcaccagttc tgggccgata atatcgcgga
    27601 ttttttctgc cgccatttcg gtgtaacagg tgctggaacc gtaaaaaaga cccatattca
    27661 taacgtaagc ttctcgattc tgctgtggct tttgcggcta gtgtatcaga atcgctttag
    27721 tcacggcaca ataaggcata atggatcaaa tgagtgacca taaggggcgc aagtgaaaca
    27781 ggatctggca cgcatcgagc agtttcttga tgctctgtgg ctggaaaaaa atctggctga
    27841 aaatacgttg aacgcttacc gtcgcgatct gtcaatgatg gtggagtggt tgcatcaccg
    27901 cgggttgacg ctggcgacgg cgcaaagtga cgatttgcag gcattactgg cagaacggct
    27961 agagggcggg tataaagcca ccagctcagc gcgtttgctg agtgcagtgc gccgattgtt
    28021 ccagtatctt tatcgcgaaa agtttcgtga agacgatccc agtgcgcatc tcgcttcacc
    28081 gaaattgcca cagcgtttgc caaaagattt aagcgaagcg caggtcgaac gtttattaca
    28141 ggcaccatta attgatcagc cactggagct acgcgataaa gccatgcttg aagtgttgta
    28201 tgctaccggg ctgcgtgtct ctgaactggt cgggctgaca atgagtgata tcagcctacg
    28261 tcagggcgta gtgcgggtca ttggtaaagg caacaaagag cgcctggtgc cgttaggtga
    28321 agaggccgtt tactggctgg aaacctatct ggaacatggg cgtccgtggc tgttgaatgg
    28381 tgtgtcaatt gacgtgttgt ttcccagcca gcgtgcgcag cagatgacgc gacagacctt
    28441 ctggcaccgc attaaacatt atgccgtgct ggcgggtatc gacagcgaaa agctgtcacc
    28501 gcatgtgttg cgtcacgctt ttgccactca tttattaaat catggtgcgg atttacgcgt
    28561 ggtgcagatg ctactgggcc acagcgatct ctccaccacg caaatttata cgcatgtcgc
    28621 taccgagcgt ctgcggcaac ttcatcaaca gcatcacccg cgggcgtgat gtctgaaaag
    28681 aacgggaaga tttatgaaga aaggttttat gttgtttact ttgttagcgg cgttttcagg
    28741 ctttgctcag gctgatgacg cggcaattca acaaacgtta gccaaaatgg gcattaaaag
    28801 cagcgatatt cagccagcac ccgtggctgg catgaagact gtgctgacta acagcggtgt
    28861 gttgtacatc accgatgacg gtaaacatat cattcagggg ccaatgtatg acgttagtgg
    28921 cgcggctccg gtcaatgtca ccaataaaat gctgctaaag cagttgaatg cgcttgaaaa
    28981 agagatgatc gtttataaag cgccgcagga aaaacacgtc atcaccgtgt ttactgatat
    29041 tacctgtggg tactgccaca aactgcatga gcaaatggca gactacaacg cgctggggat
    29101 caccgtgcgt tatcttgctt tcccgcgcca ggggctggag agccaggctg agcaacaaat
    29161 gaaagccatc tggtgtgcga aagataaaaa caaagcgttt gatgatgtga tggctggtaa
    29221 agctgccact ccggcaagtt gcgatatcga tattgccgat cattacgcac ttggcgtcca
    29281 gcttggcgtt agcggcactc cggcaattgt gctgagcaat ggcacacttg ttccgggtta
    29341 ccagccgccg aaagagatga aagaattcct cgacgaacac caaaaaatga ccagcggtaa
    29401 ttaattcgcg tgaaacaaca gatacaactt cgtcgccgtg aagtcgatga aacggcagac
    29461 ttgcccgctg aattgcctcc cttgctgcgc cgtttatacg ccagccgggg agtacgcagt
    29521 gcgcaagaac tggaacgcag tgttaaaggt atgttgccct ggcagcaact aagcggtgtc
    29581 gaaaaggccg ttgagatcct ttacaacgct tttcgcgaag gaacgcggat tattgtggtc
    29641 ggtgatttcg acgccgacgg cgcgaccagc acggctctaa gcgtgctggc gatgcgctcg
    29701 cttggttgca gcaatatcga ctacctggta ccaaaccgtt tcgaagacgg ttacggctta
    29761 agcccggaag tggtcgatca ggcccatgcc cgtggcgcgc agttaattgt cacggtggat
    29821 aacggtattt cctcccatgc gggggttgaa cacgctcgct cgttgggcat tccggttatt
    29881 gttaccgatc accatttgcc aggcgaaaca ttacccgcgg cggaagcgat cattaaccct
    29941 aacttgcgcg actgtaattt cccgtcgaaa tcactggcag gcgtgggtgt ggcgttttat
    30001 ctgatgctgg cgctgcgcac ctttttgcgc gatcagggct ggtttgatga gcgcggcatc
    30061 gcaattccta acctggcaga actgctggat ctggtcgcgc tggggacagt ggcggacgtc
    30121 gtgccgctgg acgctaataa tcgcattctg acctggcagg ggatgagtcg catccgtgcc
    30181 ggaaagtgcc gtccagggat taaagcgctg ctggaagtgg caaaccgtga tgcacaaaaa
    30241 ctcgccgcca gcgatttagg ttttgcgctg gggccacgtc tcaatgctgc cgggcgactg
    30301 gacgatatgt ccgtcggtgt ggcgctgttg ctgtgcgaca acatcggcga agcgcgcgtg
    30361 ctggcaaatg aactcgatgc gctaaatcag acgcgaaaag agatcgaaca aggaatgcag
    30421 attgaagcct tgaccctgtg cgagaaactg gagcgaagtc gcgacacgct acccggcggg
    30481 ctggcaatgt atcaccccga atggcatcag ggcgttgtcg gtattctggc ttcgcgcatc
    30541 aaagagcgtt ttcaccgtcc ggttatcgcc tttgcgccag caggtgatgg tacgctgaaa
    30601 ggttccggtc gctccattca ggggctgcat atgcgtgatg cgctggagcg attagacaca
    30661 ctctaccccg gtatgatgct gaagtttggc ggtcatgcga tggcggcggg tttgtcgctg
    30721 gaagaggata aattcgaact ctttcaacaa cggtttggcg agctggttac cgagtggctg
    30781 gacccttcgc tattgcaagg cgaagtggtg tcagacggcc cgttaagccc ggccgaaatg
    30841 accatggaag tggcgcagct gctgcgcgat gctggcccgt gggggcagat gttcccggag
    30901 ccgctgtttg atggtcattt ccgtctgctg caacagcggc tggtgggcga acgtcatttg
    30961 aaagtcatgg tcgaaccggt cggcggcggt ccgctgctgg atggtattgc ttttaatgtc
    31021 gataccgccc tctggccgga taacggcgtg cgcgaagtgc aactggctta caagctcgat
    31081 atcaacgagt ttcgcggcaa ccgcagcctg caaattatca tcgacaatat ctggccaatt
    31141 tagcgtcatc ttctctataa aaaagagcgt ggattgggta caatcccgct cttatcaccg
    31201 cattttgact agctcaataa aagaaatcag accatgtttg aaattaatcc ggtaaataat
    31261 cgcattcagg acctcacgga acgctccgac gttcttaggg ggtatctttg actacgacgc
    31321 caagaaagag cgtctggaag aagtaaacgc cgagctggaa cagccggatg tctggaacga
    31381 acccgaacgc gcacaggcgc tgggtaaaga gcgttcctcc ctcgaagccg ttgtcgacac
    31441 cctcgaccaa atgaaacagg ggctggaaga tgtttctggt ctgctggaac tggctgtaga
    31501 agctgacgac gaagaaacct ttaacgaagc cgttgctgaa ctcgacgccc tggaagaaaa
    31561 actggcgcag cttgagttcc gccgtatgtt ctctggcgaa tatgacagcg ccgactgcta
    31621 cctcgatatt caggcggggt ctggcggtac ggaagcacag gactgggcga gcatgcttga
    31681 gcgtatgtat ttgcgctggg cagaatcgcg tggtttcaaa actgaaatca tcgaagagtc
    31741 ggaaggtgaa gtggcgggta ttaaatccgt gacgatcaaa atctccggcg attacgctta
    31801 cggctggctg cgtacagaaa ctggcgttca ccgcctggtg cgtaagagcc cgtttgactc
    31861 cggcggtcgt cgccacacgt cgttcagctc cgcgtttgtt tatccggaag ttgatgatga
    31921 tattgatatc gaaatcaacc cggcggatct gcgcattgac gtttatcgcg cgtccggcgc
    31981 gggcggtcag cacgttaacc gtaccgaatc tgcggtgcgt attacccaca tcccgaccgg
    32041 gatcgtgacc cagtgccaga acgaccgttc ccagcacaag aataaagacc aggccatgaa
    32101 gcagatgaaa gcgaagcttt atgaactgga gatgcagaag aaaaatgctg agaaacaggc
    32161 gatggaagat aacaaatccg acatcggctg gggcagccag attcgttctt atgtccttga
    32221 tgactcccgc attaaagatc tgcgcaccgg ggttgaaacc cgcaatacgc aggccgtgct
    32281 ggacggcagc ctggatcaat ttatcgaagc aagtttgaaa gcagggttat gaggaaccaa
    32341 catgtctgta caacacgcac agggcgctga cgcggtagtc gatcttaaca atgaactgaa
    32401 aacgcgtcgt gagaagctgg cgaacctgcg tgagcaggga attgccttcc cgaacgattt
    32461 ccgtcgcgat catacctctg accaattgca cgcagaattc gacggtaaag agaacgaaga
    32521 actggaagcg ctgaacatcg aagtcgccgt tgctggccgc atgatgaccc gccgtattat
    32581 gggtaaagcc tcttttgtta ccctgcagga cgttggcggt cgtattcagc tgtacgttgc
    32641 ccgtgacgat cttccggaag gcgtttacaa cgagcagttc aaaaaatggg atctcggcga
    32701 catcctcggc gcgaaaggta aactgttcaa aaccaaaacc ggcgaactgt ctatccactg
    32761 caccgagctg cgtctgctga ccaaagcact gcgtccgctg ccggacaaat tccacggctt
    32821 gcaggatcag gaagcgcgct atcgtcagcg ttatctggat ctcatctcta acgatgaatc
    32881 ccgcaacacc tttaaagtgc gttcgcagat cctctctggc attcgccagt tcatggtaaa
    32941 tcgcggcttt atggaagttg aaacgccgat gatgcaggtg atcccaggcg gtgccgctgc
    33001 gcgtccgttt atcacccatc ataacgcgct ggatcttgac atgtacctgc gtatcgcgcc
    33061 ggaactgtac ctcaagcgtc tggtggtcgg tggcttcgag cgtgtattcg aaatcaaccg
    33121 taacttccgt aacgaaggta tttccgtacg tcataaccca gagttcacca tgatggaact
    33181 ctatatggct tacgcagatt acaaagatct gatcgagctg accgaatcgc tgttccgtac
    33241 tctggcacag gatattctcg gtaagacgga agtcacctac ggcgacgtga cgctggactt
    33301 cggtaaaccg ttcgaaaaac tgaccatgcg tgaagcgatc aagaaatatc gcccggaaac
    33361 cgacatggcg gatctggaca acttcgactc tgcaaaagcg attgctgaat ctatcggcat
    33421 ccacgttgag aagagctggg gtctgggccg tatcgttacc gagatcttcg aagaagtggc
    33481 agaagcacat ctgattcagc cgaccttcat tactgaatat ccggcagaag tttctccgct
    33541 ggcgcgtcgt aacgacatta acccggaaat cacagaccgc tttgagttct tcatcggtgg
    33601 tcgtgaaatc ggtaacggct ttagcgagct gaatgacgcg gaagatcagg cgcagcgctt
    33661 cctggatcag gttgccgcga aagacgcagg tgacgacgaa gcgatgttct acgacgaaga
    33721 ttacgtcacc gcactggaac acggcttacc gccgacagca ggtctgggaa ttggtatcga
    33781 ccgtatggta atgctgttca ccaacagcca taccatccgc gacgttattc tgttcccggc
    33841 gatgcgtcca gtaaaataag cattacgtta tgctaataac cccggcaaat gtcggggttt
    33901 tttaattgtg ctgcgcgaaa gcagacaaca attttcttgc ttcactattg gctgcctgca
    33961 ttaccatcca cggactgaac gcccacggcg tggcatcaat accgtgtaat acatctgcta
    34021 aatcacacca ttgataatcc atcacttcat catcgttgat ctgtaacgca ctgttggtgc
    34081 gtgcggcaaa taccggacac acttcatttt ccacaatgcc attcggatcg gtggcgcgat
    34141 agcgaaagtc aggatagata gattcaggag gcgtaatttc cacgccaagc tcataacggc
    34201 aacggcggat cactgcgtct tcgttgcttt ctcccagttg tgggtgccca caaaccgagt
    34261 tagtccacac gccaggccat gcttttttgc tcagtgcgcg gcgggtaact aataattgcc
    34321 ccttggcatt aaacagccaa ctggagaacg cgagatgtaa gagggtgtct gccgtgtgtg
    34381 cggcatactt ttccagcgta cccgtgggaa ctccctgtgc attcaataaa atgacgtgtt
    34441 ccgtttgcat aatttctcac atgtaattct gatcactcat cattatagat aattgaagag
    34501 tgaaatgatt aaccaagtga gcgtttatcg acaaccgccc gttttgagcg gatgccgaca
    34561 ggtaaaaacc atttaaaaaa gtagcatcat atatttgaag cgactttcaa tggccattgc
    34621 aacacagtca gaaatgacag gaatagagag agtaaaaagc aacagcagac tgaatatagc
    34681 gcgcattaaa agatttatat tattctccat gctcattttt cttcagcttg cgcatcagaa
    34741 gccacatacg tactgtcctg acttttaaat ctttatcaga gacggattcc ttcaccaggt
    34801 cagcatgatg ctgatagcca ttaaagaaga cgttcagcac aacggcgcta agggttgcga
    34861 gcataatgcc gctatgtagc agcggttgca gtacggccgg taacttagaa aagaaatcgt
    34921 gagagagcgt cggagtcatg ccaacgccga gactgatcgc cacaatatag aggttgtaac
    34981 ggttggtggt gtagttacag cgcgacagaa ttcgaatccc tgtcgccagt accatgccga
    35041 acatcactag accagcgccg cccagcacaa attgcggaat ggaggctacc agcaccgcca
    35101 tttttggcac catgccaaac aggattaata taattcccga agaaatacac acccagcggc
    35161 tatgaacgcg cgtcacgcta accaggccaa cgttttgaga aaatgacgtg tgggggaagc
    35221 tgttaaacgt gccgcctatc attgtcccta cgccatcgac acgcagcccg cgaataatat
    35281 cgtgtgaaga gagtttacga ccgactattt cacccagtgc caggaacatc cccatcgact
    35341 cgataaacac gatgattaac acggcagtca tggtcagaat ggaaacggga tcgaaaatcg
    35401 gcataccaaa cgacatcggg gtgacaatcg caaaccacaa ggcatcatgt agcccggata
    35461 aattgacttc attcatcatc cacgaaagta aaaagccaaa tacaatcccc agtaatacgg
    35521 cgacgttgga cataaatcct ttcgcatagc gagtaatgag caagataaaa attaagacgg
    35581 caaaggagat acctgaataa acgggattac catattgcgg attcccttta cctccggcgg
    35641 cccagtcaat acccacctga atgatgctaa gtccgacaga agtaataacc acaccggtaa
    35701 ccagtggcgg gaataaaggc atcaagcgac cgataagtgg cgctaataat gtggtgataa
    35761 aacccgcggc gatagtggca ccaaatatcc ccagcaggcc aatatccggg ttcatcccaa
    35821 tggctatcat tggtgttaca gcagcaaagg tcaccgacat aatcaccggc aggcggatcc
    35881 ccataaagcg gccgataccg atacattgca ataatgtgac gatcccgcag caaaagagat
    35941 ccgagctaat gagcatcgca atagcttctt ttgagaggcc cagtcggtca ccaatcataa
    36001 gaggaacagc gactgcacct gcgtacatga caaggacgtg ttgcagaccg agtatgatca
    36061 gctttcctgg tgataatatg cggtcaacct catcagttgg gcggtcttgc ccagaagatg
    36121 agagaagttg ggaatctatg gcgctcatca gtgtttctcc tttcgcccgc cagagtaaaa
    36181 agcaaccgtt tacgttaatg aaactgtcta aacacatgct cgtggagtgc cagtttttgc
    36241 gaggaagggg agttagagac aggaattgcg gaggcaatca cataatcgtg gttaaaccac
    36301 gaaaatgaga agagaacctg acaatggaat tatctgtaat tttctcatat tgatatttca
    36361 ttaatcattc tggcatgtcg tactctcgca tttaatcgtt tttatctgga tagcactctt
    36421 ttgatcggca atgttgaaat aatgaaagcg gcatagattg aggggcaata atttgaactc
    36481 agtcgcaaaa ttataattaa aacggtcatg ctacctaata tatgcccgtt
//
LOCUS       DADKRT010000018        35065 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.018, whole genome shotgun sequence.
ACCESSION   DADKRT010000018 DADKRT010000000
VERSION     DADKRT010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 35065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35065
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.018"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..334)
                     /locus_tag="JQ356_000773"
     CDS             complement(<1..334)
                     /locus_tag="JQ356_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY4620948.1"
                     /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFDLSSS
                     WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFV
                     AQTAMCCGE"
     gene            complement(415..1842)
                     /locus_tag="JQ356_000774"
     CDS             complement(415..1842)
                     /locus_tag="JQ356_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HAY4620949.1"
                     /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETEPQGFKQLRQ
                     AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY
                     CSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAI
                     AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKL
                     HRNLLRWYSAGRLDIPELLDYARSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCD
                     YWREYPSTQADALILQWCRQHRVDYYPLVVMMIEARELVNDQGKQLLYVPGDSARTRF
                     HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHLLWPLYLVAKQLVQASQPT
                     EESLMPIVSRLDAEDRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGC
                     LGVIKIIFYIFIFAGLIGKILHLFG"
     gene            complement(1839..2546)
                     /locus_tag="JQ356_000775"
     CDS             complement(1839..2546)
                     /locus_tag="JQ356_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY4620950.1"
                     /translation="MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS
                     WGIDDRDDLLRTIHRMIENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV
                     ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
                     YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQP
                     LADYPTCPETLKDMSDL"
     gene            2709..3686
                     /locus_tag="JQ356_000776"
     CDS             2709..3686
                     /locus_tag="JQ356_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HAY4620951.1"
                     /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP
                     DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKTALQGHTFASN
                     ALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
                     QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGE
                     GVDQDYKQAMYWYLKAAAQESVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA
                     TVWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL"
     gene            complement(3756..4238)
                     /locus_tag="JQ356_000777"
     CDS             complement(3756..4238)
                     /locus_tag="JQ356_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HAY4620952.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
                     EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
                     "
     gene            4473..7055
                     /gene="leuS"
                     /locus_tag="JQ356_000778"
     CDS             4473..7055
                     /gene="leuS"
                     /locus_tag="JQ356_000778"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HAY4620953.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
                     DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
                     NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKS
                     MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
                     ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA
                     VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
                     EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
                     PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPEY
                     KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
                     GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
                     NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
                     KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
                     TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
                     STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
                     LVVG"
     gene            7070..7651
                     /gene="lptE"
                     /locus_tag="JQ356_000779"
     CDS             7070..7651
                     /gene="lptE"
                     /locus_tag="JQ356_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HAY4620954.1"
                     /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
                     GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
                     TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
                     SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN"
     gene            7651..8682
                     /gene="holA"
                     /locus_tag="JQ356_000780"
     CDS             7651..8682
                     /gene="holA"
                     /locus_tag="JQ356_000780"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HAY4620955.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
                     QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
                     LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL
                     ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRTLHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK
                     PLADVFIDG"
     gene            8684..9325
                     /gene="nadD"
                     /locus_tag="JQ356_000781"
     CDS             8684..9325
                     /gene="nadD"
                     /locus_tag="JQ356_000781"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HAY4620956.1"
                     /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP
                     HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL
                     AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNQED
                     LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
     gene            9349..9957
                     /locus_tag="JQ356_000782"
     CDS             9349..9957
                     /locus_tag="JQ356_000782"
                     /EC_number="3.1.3.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
                     /protein_id="HAY4620957.1"
                     /translation="MRLWLIRHGETQANIDGLYSGHAPPLTARGIEQAQNLHTLLHGV
                     SFDLVLCSELERAQHTARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAENY
                     SAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARLI
                     GMPAEAMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVDNA"
     gene            10217..10534
                     /gene="rsfS"
                     /locus_tag="JQ356_000783"
                     /gene_synonym="rsfA"
     CDS             10217..10534
                     /gene="rsfS"
                     /locus_tag="JQ356_000783"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HAY4620958.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            10538..11005
                     /gene="rlmH"
                     /locus_tag="JQ356_000784"
     CDS             10538..11005
                     /gene="rlmH"
                     /locus_tag="JQ356_000784"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HAY4620959.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            11036..12937
                     /gene="mrdA"
                     /locus_tag="JQ356_000785"
     CDS             11036..12937
                     /gene="mrdA"
                     /locus_tag="JQ356_000785"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HAY4620960.1"
                     /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
                     DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
                     SGYWELAKDGMYGVANRPNGTTHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
                     PAVAAAEDH"
     gene            12940..14052
                     /gene="mrdB"
                     /locus_tag="JQ356_000786"
                     /gene_synonym="rodA"
     CDS             12940..14052
                     /gene="mrdB"
                     /locus_tag="JQ356_000786"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HAY4620961.1"
                     /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
                     SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            14063..15151
                     /gene="rlpA"
                     /locus_tag="JQ356_000787"
     CDS             14063..15151
                     /gene="rlpA"
                     /locus_tag="JQ356_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HAY4620962.1"
                     /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
                     GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
                     PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
                     NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP
                     VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA
                     MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
                     FASKAEASTLQQRLQTEAQLQSFITTAQ"
     gene            15291..16502
                     /gene="dacA"
                     /locus_tag="JQ356_000788"
     CDS             15291..16502
                     /gene="dacA"
                     /locus_tag="JQ356_000788"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HAY4620963.1"
                     /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI
                     DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
                     REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDMYLTIPRGRM
                     KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            16613..16876
                     /locus_tag="JQ356_000789"
     CDS             16613..16876
                     /locus_tag="JQ356_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HAY4620964.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
                     PTVKPSSKGNYHSVSITINATHIEQVEILYEELGKIDIVRMVL"
     gene            16977..17618
                     /gene="lipB"
                     /locus_tag="JQ356_000790"
     CDS             16977..17618
                     /gene="lipB"
                     /locus_tag="JQ356_000790"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415163.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HAY4620965.1"
                     /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV
                     TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA"
     gene            17877..18830
                     /locus_tag="JQ356_000791"
     CDS             17877..18830
                     /locus_tag="JQ356_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HAY4620966.1"
                     /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIALNLLTIFEAVYVHK
                     GIVNAAKVLNLPPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES
                     ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL
                     SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL
                     PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP
                     LEKLPFPSLNKEQIDFSIHYNKFSLRDPILHGVIDVIRNAF"
     gene            19039..20004
                     /gene="lipA"
                     /locus_tag="JQ356_000792"
     CDS             19039..20004
                     /gene="lipA"
                     /locus_tag="JQ356_000792"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HAY4620967.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVAIEREALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
                     PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(20105..20308)
                     /gene="tatE"
                     /locus_tag="JQ356_000793"
     CDS             complement(20105..20308)
                     /gene="tatE"
                     /locus_tag="JQ356_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HAY4620968.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
                     DDDAAAKKGADVDLQAEKLSHKE"
     gene            complement(20437..21225)
                     /locus_tag="JQ356_000794"
     CDS             complement(20437..21225)
                     /locus_tag="JQ356_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
                     /protein_id="HAY4620969.1"
                     /translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
                     RDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAG
                     NIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQA
                     LQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPF
                     GVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL"
     gene            21318..21701
                     /gene="crcB"
                     /locus_tag="JQ356_000795"
     CDS             21318..21701
                     /gene="crcB"
                     /locus_tag="JQ356_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HAY4620970.1"
                     /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIG
                     AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VFVNLLGSFAMTALAFWLFSASTAH"
     gene            complement(21756..21965)
                     /gene="cspE"
                     /locus_tag="JQ356_000796"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(21756..21965)
                     /gene="cspE"
                     /locus_tag="JQ356_000796"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY4620971.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVIAL"
     gene            complement(22140..22700)
                     /locus_tag="JQ356_000797"
     CDS             complement(22140..22700)
                     /locus_tag="JQ356_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid:lipid A palmitoyltransferase"
                     /protein_id="HAY4620972.1"
                     /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAPTWQQ
                     PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS
                     WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP
                     VTFQMTYIPGTYNNGNVYFAWMRFQF"
     gene            23289..24674
                     /gene="dcuC"
                     /locus_tag="JQ356_000798"
     CDS             23289..24674
                     /gene="dcuC"
                     /locus_tag="JQ356_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HAY4620973.1"
                     /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
                     MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
                     VPGTAAAVTGK"
     gene            complement(24715..25395)
                     /gene="dpiA"
                     /locus_tag="JQ356_000799"
                     /gene_synonym="citB"
     CDS             complement(24715..25395)
                     /gene="dpiA"
                     /locus_tag="JQ356_000799"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HAY4620974.1"
                     /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM
                     MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF
                     DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID
                     PLTLNAVRKLFKEPGVQHTAETVAQALTISRTSARRYLEYCASRHLIIAEIVHGKVGR
                     PQRIYHSG"
     gene            complement(25364..27021)
                     /gene="dpiB"
                     /locus_tag="JQ356_000800"
                     /pseudo
     CDS             complement(25364..27021)
                     /gene="dpiB"
                     /locus_tag="JQ356_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308685.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
     gene            27370..28428
                     /gene="citC"
                     /locus_tag="JQ356_000801"
     CDS             27370..28428
                     /gene="citC"
                     /locus_tag="JQ356_000801"
                     /EC_number="6.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
                     /protein_id="HAY4620975.1"
                     /translation="MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTR
                     DEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYE
                     ALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNG
                     HRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISR
                     ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMR
                     YWLKTPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQ
                     NLLEHSRQDAAARQKTPA"
     gene            28443..28739
                     /gene="citD"
                     /locus_tag="JQ356_000802"
     CDS             28443..28739
                     /gene="citD"
                     /locus_tag="JQ356_000802"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HAY4620976.1"
                     /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
                     IRTTILDVLARYNVRGVQLNVDDKGTLDCILRARLEALLARASGIPTLPWEDCQ"
     gene            28736..29644
                     /gene="citE"
                     /locus_tag="JQ356_000803"
     CDS             28736..29644
                     /gene="citE"
                     /locus_tag="JQ356_000803"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HAY4620977.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
                     DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG
                     KMVDGPVIDRARLVLSRAELSGIREE"
     gene            29655..31187
                     /gene="citF"
                     /locus_tag="JQ356_000804"
     CDS             29655..31187
                     /gene="citF"
                     /locus_tag="JQ356_000804"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HAY4620978.1"
                     /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR
                     KLCANLEEAIHRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD
                     CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI
                     DVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASI
                     EQEQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT
                     GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA
                     QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRG
                     ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR
                     PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV
                     KE"
     gene            31191..31741
                     /gene="citX"
                     /locus_tag="JQ356_000805"
                     /pseudo
     CDS             31191..31741
                     /gene="citX"
                     /locus_tag="JQ356_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308680.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
     gene            31716..32543
                     /gene="citG"
                     /locus_tag="JQ356_000806"
     CDS             31716..32543
                     /gene="citG"
                     /locus_tag="JQ356_000806"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005056457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
                     /protein_id="HAY4620979.1"
                     /translation="MSMPATSTKTTKLATSLIDEYALLGWHAMLTEVNLSPKPGLVDR
                     INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM
                     FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQSLTPTTVCSTAASFCRGLTDRELRTN
                     NSQLTAGQRLYQQLALTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL
                     LMAINGDTNVASRGGEGACAGYSARRKHYCKKGAFEPPPISIISGSSTGSVSNEISV"
     gene            32644..34107
                     /gene="citT"
                     /locus_tag="JQ356_000807"
     CDS             32644..34107
                     /gene="citT"
                     /locus_tag="JQ356_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/succinate antiporter CitT"
                     /protein_id="HAY4620980.1"
                     /translation="MSLAKDNIWKLLAPLVVMGVMFLIPVPNGMPPQAWHYFAVFVAM
                     IVGMILEPIPATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSST
                     TVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT
                     ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL
                     GLEFVSKIAGIQISWLQWFLCFLPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDE
                     LKTMGALTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITR
                     YNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAH
                     YLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIY
                     GCGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN"
     gene            34218..35024
                     /gene="rna"
                     /locus_tag="JQ356_000808"
     CDS             34218..35024
                     /gene="rna"
                     /locus_tag="JQ356_000808"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HAY4620981.1"
                     /translation="MKAFWRNAALLAVSLLPFSSANAVALQAKQYGDFDRYVLALSWQ
                     TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG
                     CATRPIPNLPEAHASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF
                     GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKL
                     TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPSNCGKTFVIDKVGY"
BASE COUNT         8733 a         8940 c         8664 g         8728 t
ORIGIN      
        1 cttccccaca gcacatagcg gtttgggcaa cgaattgggt ataaatcaac cctctctccg
       61 agccaccagc aattaatgct ttccactctt caggggaaga gcgatgccat gtcagatata
      121 agccagctaa atcattggca tgaccatcat cagtcatctg ataaatagtc tgaattaaat
      181 catcacgatt atttattccc caggatgatg agagatcgaa ttcttttata ccggtataca
      241 tttttggcga gtcatgcgcg ggtttgcaac cctgattaag tatttccatg ggcgcagaaa
      301 gcgcaaaaag aagatattgt tcttccttat tcatttgtta ataatccctt aagtgcatta
      361 actgactact tttttatatt acttgccggg ctttccgcac attaacgtcg actgtcaccc
      421 gaacagatgg agtattttcc ctatcaaacc ggcaaagata aaaatgtaga aaataatttt
      481 gatgacgccc agacagcccg gcccaccatc gtcaacgggc attggctgcg gttgcggctc
      541 cggttcaaca gtttgcttct cggtaaaatt cgccgcctga attaataatc gacgaataat
      601 taatgcttcc agtggacaac gatcttctgc atcaagacgg cttacgatcg gcattaatga
      661 ttcttctgtc ggttggctgg cctgcactaa ttgtttggca actaaatata atggccataa
      721 gagatgttct gtatcacgcg tgagtgagat ccgcggctta cgtcctttgt gcaaaaccat
      781 ctcgaccagt gaacgcccca gcgcagagag tttttcatcg ctgagtattt cgtataaatg
      841 aaaacgcgta cgggcgctgt cgccggggac ataaagtagc tgtttaccct gatcgttaac
      901 cagttcacga gcttcaatca tcatcaccac taacgggtaa taatcgaccc gatgctgacg
      961 gcaccattgc aatattaaag catccgcctg ggtggaggga tactcgcgcc agtagtcaca
     1021 aagttctgcc agcaagcttt cgccttctcc acaatagacg cgttgcgcgt attcataata
     1081 acgcgcatct tcattatcag gttcagcttc ccgccacgac cgggcgtaat ccagaagttc
     1141 ggggatatcc aggcgacctg cgctatacca gcggagtaaa tttctgtgca gttttgcatc
     1201 atcggggatg atcactgcgc gatgttgcgc taaatacaat gtcagccatt ctggatgcga
     1261 tgaccaaatc cgagcgaaca tttggtaaaa atcgatggtg tcattttgca cggcaacggg
     1321 cagatgcaga atggtctgga agttaaaaac attccccttc gcaatggcat ataaaaagga
     1381 ttccagttct tcttcgtcta tttccccgac gttttcctcc tgcaaccacc gcaatctttc
     1441 tgctaataac accacgcact cgaaggataa atgggcagtg ttcatggcga ttgtgcacag
     1501 cgaccagcgt aattcatcaa tctcttccat cgagcaataa tttaattgct gaatgaatcg
     1561 ctgccaggcg gagggcagaa aacgttcgct atcagaggca agtaacgcgc gaaaggcgag
     1621 cagaatttca tgttctgcta cctcatattc ttctggttgc caaacagatt tagcaggcga
     1681 ctgcgcaatc cgtagcgcct cctcatacgc ctgacgaagt tgtttaaaac cctgcggttc
     1741 ggtttctgga tgaaaggacg gtaacagcgc cagataagcg cggcggataa tatcgacgtc
     1801 agtcgtttcc tctatatcga ggatcttcca gcaatttttc ataagtcgct catatcctta
     1861 agcgtttccg ggcatgtggg gtagtcagcc agtggttgcc aggacaaggt agggtaatac
     1921 gcatcatcac tggcaaataa ttgataaaac atatcattgc cggaatcgtc gtattcttta
     1981 cgcgctaaga attcgcgtaa taaaggcaga tgatcatctt cgggagactg ccaatattgc
     2041 cgaccaaagg tataaccggc aaagtattgc cgccagttac tataataacg tagagcccgt
     2101 agatgaatac gcgactggat ccatagactt tcttcttcac tcaaccagtt attaagtacg
     2161 cccattcgac ttaaaaaacc catccggaca taatcccatg ctttaattcc tccctcacca
     2221 cagcattcgg ctgtgctggc gacaaattgc gcataagcct gaccttgctc atttaattca
     2281 gcaagatagt cacgccattc acatggagaa taacgaaacc agcggtgata aaaccctgcc
     2341 aaccgagcgg catgaccgtt ctcgatcatt cggtgaattg tgcgcagcag gtcatcacgg
     2401 tcatcaattc cccatgagga agaaaggtca aaaaagcatg tacctaaata cattttgggg
     2461 gatgaatgcg aaggtaaaca gcattcattg cgtatttcca tcggagtgga aagtgcaaac
     2521 aatatttttt gcgaccccat gtccatataa tttatcctta aacattcatt taatgaatgt
     2581 aaactacatt tcgagactca gttatttata cttttctgac gcgacataat acgcataaaa
     2641 taaggcttac gcaaaaatgg aacacataaa atataatatg ttttatctac aaccataagg
     2701 aaatgataat gatttttacg tcaagttgct gcgataattt atcaatagat gagattatcg
     2761 aacgtgctga aaaaggcgat tgcgaggctc aatatattgt tgggttttat tataatcgcg
     2821 atagcgcaat tgactctccg gacgacgaaa aggcctttta ctggctgaag ctggccgccg
     2881 agcaaggtca ttgtgaagca caatattcct taggacaaaa gtatactgag gataaaagcc
     2941 gtcataaaga taatgagcat gccatctttt ggctgaaaaa aactgcccta caaggccata
     3001 ctttcgcttc caacgccctt ggctggatac tggatcgtgg agaagacccc aattataaag
     3061 aagcggttgt ctggtatcag atagccgcgg agagcggaat gtcttatgcg caaaataatc
     3121 ttgggtggat gtacagaaat ggcaacggag tcgcaaaaga ctatgcgctg gcatttttct
     3181 ggtacaaaca agctgcatta caaggccata gtgacgcgca aaacaatctg gccgatcttt
     3241 atgaagacgg aaaaggcgtt gctcaaaaca agacactcgc cgcattctgg tatttgaaaa
     3301 gcgcacagca gggtaatcgg cacgcccagt ttcaaattgc atgggattat aacgctggcg
     3361 aaggggtgga ccaggactat aagcaagcga tgtactggta tctgaaggct gccgctcagg
     3421 aaagcgtcgg cgcttacgtc aacatcggtt atatgtataa acacggacaa ggcgttgaga
     3481 aagattatca ggctgccttt gaatggttta cgaaagccgc tgaatgcaat gacgccactg
     3541 tctggtataa cctggccatt atgtatcact acggagaagg aagacctgtc gatctccgac
     3601 aggctctcga cctgtatcgt aaagttcagt catccggaac cagagatgtc agtcaggaaa
     3661 ttcgtgagac tgaagattta ctgtagagat aaaaacaagg gccggggaat ttcattcggc
     3721 ccatattctc tttattgctg tgcgaaatca gactattacg gctcaaacgg gcgtctctgg
     3781 aactggtcat gaccacattt cgggcatagc gtcagcactt ccggtgtgta gatcgggaga
     3841 tggaagtgac atttctcgca gaccagattt cccagcccga ccacttctcc gctgtgataa
     3901 accccatgat gattgaggtc ctggaaaact tcgcgccatt caagctgcgt tttatcggtg
     3961 atatctgcca gctcctgcca taagctttct ttaatcaccc gcataaagac gctgtcagat
     4021 tcttctttca ggctctcttc atagctcatg gcgaactctt ccaggtcacg tcttacagct
     4081 cgcgtcagct catcgacctc ggttcgcgtt aactcccctg tttttattac gcgctcgcgc
     4141 gcctgttcca ccagtgcgtc gatatcacgt tcgccattgc gcaggcgttc gctcagtgac
     4201 gcgaccagtt cacggtaata ttgagcaacc ttgttcatcg tttcatctcc cgggtcgtta
     4261 actgactata ataatagacg ttctttgttc cttgctttgc taatacgccc acaaactctg
     4321 taaattaatg tatgaataat ccgggcatca tttcaacgtc gagtgcgcga aaggctgttt
     4381 tgacgcggac gtttgggcta tgctatgcgg atctgaaaaa ccacctcaac gctacatttg
     4441 tagccgtatt gaaaacagga ccactggctg ccatgcaaga gcaataccgc ccggaagaga
     4501 tagaatccaa agtacagctt cattgggatg agaagcgcac atttgaagta accgaagacg
     4561 agagcaaaga gaagtattac tgcctgtcta tgcttcccta tccttctggt cgactacaca
     4621 tgggccacgt acgtaactac accatcggtg acgtgatcgc ccgctaccag cgtatgctgg
     4681 gcaaaaacgt cctgcagccg atcggctggg acgcgtttgg tctgcctgcg gaaggcgcgg
     4741 cggtgaaaaa caacaccgct ccggcaccgt ggacgtacga caacatcgcg tatatgaaaa
     4801 accagctcaa aatgctgggc tttggttatg actggagccg cgagctggca acctgtacgc
     4861 cggaatacta ccgttgggaa cagaaattct tcaccgagct gtataaaaaa ggcctggtat
     4921 ataagaagac ttctgcggtc aactggtgcc cgaacgacca gaccgtactg gcgaacgaac
     4981 aagttatcga cggctgctgc tggcgctgcg ataccaaagt tgaacgtaaa gagatcccgc
     5041 agtggtttat caaaatcact gcttacgctg acgagctgct caacgatctg gataaactgg
     5101 atcactggcc agacaccgtt aaaagcatgc agcgtaactg gatcggtcgt tccgaaggcg
     5161 tggagatcac cttcaacgtt aacgactatg acaacacgct gaccgtttac actacccgcc
     5221 cggacacctt tatgggttgt acctacctgg cggtagctgc gggtcatccg ctggcgcaga
     5281 aagcggcgga aaataatcct gaactggcgg cctttattga cgaatgccgt aacaccaaag
     5341 ttgccgaagc tgaaatggcg acgatggaga aaaaaggcgt cgatactggc tttaaagctg
     5401 ttcacccatt aacgggcgaa gaaattcccg tttgggcagc aaacttcgta ttgatggagt
     5461 acggcacggg cgcagttatg gcggttccgg gtcacgacca gcgcgactac gagtttgcct
     5521 ctaaatacgg cctgaacatc aaaccagtta tcctggctgc tgacggctct gagccagatc
     5581 tttctcagca agccctgact gaaaaaggcg tgctgttcaa ctctggcgaa ttcaacggtc
     5641 ttgaccatga agcggccttc aacgccatcg ccgataaact gactgcgatg ggcgttggcg
     5701 agcgtaaagt gaactaccgc ctgcgcgact ggggtgtttc tcgtcagcgt tactggggcg
     5761 cgccgattcc gatggtgacg ctggaagacg gtaccgtaat gccgaccccg gacgaccagc
     5821 tgccggtgat cctgccggaa gatgtggtga tggacggcat taccagcccg attaaagcag
     5881 atccggagtg ggcaaaaact accgttaacg gtatgccagc gctgcgtgaa accgacactt
     5941 tcgacacctt tatggagtcc tcctggtact atgcgcgcta cacttgccca gagtacaaag
     6001 aaggtatgct ggattccgaa gcagctaact actggctgcc ggtggatatc tacattggtg
     6061 gtatcgaaca cgccattatg cacctgctct acttccgctt cttccacaaa ctgatgcgtg
     6121 atgcaggcat ggtgaactct gacgaaccag cgaaacagtt gctgtgtcag ggtatggtgc
     6181 tggcagatgc cttctactat gttggcgaaa acggcgaacg taactgggtt tccccggttg
     6241 atgctatcgt tgaacgtgac gagaaaggcc gtatcgtgaa agcgaaagat gcggcaggcc
     6301 atgaactggt ttataccggc atgagcaaaa tgtccaagtc gaagaacaac ggtatcgacc
     6361 cacaggtgat ggttgaacgt tacggcgcgg acaccgttcg tctgtttatg atgtttgctt
     6421 ctccggctga tatgactcta gaatggcagg aatccggtgt ggaaggggct aaccgctttc
     6481 tgaaacgtgt ctggaaactg gtttacgagc acacagcaaa aggtgatgtt gcggcactga
     6541 acgttgatgc gctgactgaa gatcagaaag cgctgcgtcg cgatgtgcat aaaacgatcg
     6601 ctaaagtgac cgatgatatc ggccgtcgtc agaccttcaa caccgcaatt gcggcgatta
     6661 tggagctgat gaacaaactg gcgaaagcac caaccgatgg cgagcaggat cgcgctctga
     6721 tgcaggaagc gctgctggcc gttgtccgta tgcttaaccc gttcaccccg cacatctgct
     6781 tcacgctgtg gcaggaactg aaaggcgaag gcgatatcga caacgcgccg tggccggttg
     6841 ctgacgaaaa agcgatggtg gaagactcca cgctggtcgt ggtgcaggtt aacggtaaag
     6901 tccgtgccaa aatcaccgtt ccggtggacg caacggaaga acaggttcgc gaacgtgctg
     6961 gccaggaaca tctggtagca aaatatcttg atggcgttac cgtgcgtaaa gtgatttacg
     7021 taccaggtaa actcctcaat ctggtcgttg gctaagcgcg ggaggaagcg tgcgatatct
     7081 ggcaacattg ttgttatctc tggcggtgtt aatcaccgcc gggtgtggct ggcatctgcg
     7141 tgataccacg caggttcctt ccactatgaa ggtcatgatc ctggactcag gcgatccgaa
     7201 cgggccatta agccgtgcgg tgcgtaacca gttacgtctg aatggtgtcg agttgcttga
     7261 taaagaaacc acgcgtaagg acgttccatc cctgcgtttg ggtaaagtga gcatcgcgaa
     7321 agataccgca tcggtattcc gtaacggtca aacagcagag tatcagatga tcatgacggt
     7381 gaatgcgacc gtgttgatcc ccggccgtga tatctacccg attagcgcca aagtcttccg
     7441 ttcgttcttt gataacccgc aaatggcgtt agcgaaagat aacgaacaag acatgatcgt
     7501 aaaagagatg tacgaccgtg ctgccgaaca gctgattcgt aagctgccaa gcatccgtgc
     7561 tgcggatatt cgttccgacg aagaacagac gtcgaccaca acggatactc cggcaacgcc
     7621 tgcacgcgtc tccaccacgc tgggtaactg atgattcggt tgtacccgga acaactccgc
     7681 gcgcagctca atgaagggct gcgcgcggcg tatcttttac ttggtaacga tcctctgtta
     7741 ttgcaggaaa gccaggacgc tgttcgtcag gtagctgcgg cacaaggatt cgaagaacac
     7801 cacacttttt ccattgatcc caacactgac tggaatgcga tcttttcgtt atgccaggct
     7861 atgagtctgt ttgccagtcg acaaacgcta ttgctgttgt taccagaaaa cggaccgaat
     7921 gcggcgatca atgaacaact tctcacactc accggacttc tgcatgacga cctgctgttg
     7981 atcgtccgcg gtaataaatt aagcaaagcg caagaaaatg ccgcctggtt tactgcgctt
     8041 gcgaatcgca gcgtgcaggt gacctgtcag acaccggagc aggctcagct tccccgctgg
     8101 gttgctgcgc gcgcaaaaca gctcaactta gaactggatg acgcggcaaa tcaggtgctc
     8161 tgctactgtt atgaaggtaa cctgctggcg ctggctcagg cactggagcg tttatcgctg
     8221 ctctggccag acggcaaatt gacattaccg cgcgttgaac aggcggtgaa tgatgccgcg
     8281 catttcaccc cttttcattg ggttgatgct ttgttgatgg gaaaaagtaa gcgcacattg
     8341 catattcttc agcaactgcg tctggaaggc agcgaaccgg ttattttgtt gcgcacatta
     8401 caacgtgaac tgttgttact ggttaacctg aaacgccagt ctgcccatac gccactgcgt
     8461 gcgttgtttg ataagcatcg ggtatggcag aaccgccggg gcatgatggg cgaggcgtta
     8521 aatcgcttaa gtcagacgca gttacgtcag gccgtgcaac tcctgacacg aacggaactc
     8581 accctcaaac aagattacgg tcagtcagtg tgggcagagc tggaagggtt atctcttctg
     8641 ttgtgccata aacccctggc ggacgtattt atcgacggtt gatatgaaat ctttacaggc
     8701 tctgtttggc ggcacctttg atccggtgca ctatggtcat ctaaaacccg tggaaacgct
     8761 ggcgaatttg attggtctga cgcgggtcac aatcatccct aataatgttc ctccgcatcg
     8821 tccccagccg gaagcgaaca gcgtgcagcg taaacacatg cttgaactgg cgattgccga
     8881 caagccatta tttactcttg atgaacgcga gctaaagcgc aatgccccct cttacactgc
     8941 gcaaacactg aaagagtggc ggcaggaaca aggaccggac gtgccgctgg cgtttattat
     9001 tggtcaggat tcactgctga cctttccgac ctggtacgaa tacgaaacga tactcgacaa
     9061 tgcacatttg atcgtctgtc ggcgtccagg ttacccactt gaaatggcgc aaccgcaata
     9121 ccagcaatgg ctggaagatc atttgacaca taaccaggaa gatcttcacc ttcagcctgc
     9181 cggtaaaatt tatctggctg aaacgccgtg gtttaacatc tcggcgacca tcatccgcga
     9241 acgtttgcaa aacggtgaat cgtgtgagga tttattgccg gaaccggtac tgacttacat
     9301 taaccaacaa ggcttgtatc gctgatacct gtcgttacgg agggcatgat gcgactgtgg
     9361 ttaattcgtc atggtgaaac gcaagcgaat atcgatggtc tttacagcgg tcatgcgccc
     9421 cccctgaccg cgcgcggtat tgagcaagcg caaaatctgc atacgctgct acatggtgtt
     9481 tcctttgatc tggttttatg cagtgaactg gaacgggcac agcataccgc gcgactggtt
     9541 ctcagtgacc gccagctccc cgtgcaaatc atccctgaac tcaacgaaat gttttttggc
     9601 gactgggaga tgcgacatca tcgcgacctc atgcaagaag atgccgaaaa ctatagcgcg
     9661 tggtgcaatg actggcagca tgcaatcccc acgaacggtg aaggatttca ggcattttcg
     9721 caacgtgtgg aacgctttat cgcaaggctt agtgaatttc agcactatca gaatatttta
     9781 gtcgtcagcc atcagggtgt actgagtctg ttaatcgccc gtttaattgg catgcctgcc
     9841 gaggctatgt ggcattttcg cgttgaccag gggtgttgga gcgccattga tatcaaccaa
     9901 aaattcgcga cgctacgcgt cctcaatagc cgtgccatcg gggtcgataa tgcatgactt
     9961 ttctgttttt ttacgggtaa gccgcaacga ccattgacag acccgggcag gctgatattc
    10021 tccgcagcca gacttttttc gccagacacg actttgtaga aattgtttta caaaaatggc
    10081 gatgcaatct gcggcgcggg gtgggatgat agcccacttt cgaaagccga ttcggcgaca
    10141 attgtcccga aatcgcctct ggttcaggta tactgacaga ccatttttat ctatttgatt
    10201 cacccagggg gaaaacttgc agggtaaagc actccaggat tttgttatcg acaaaattga
    10261 tgacctcaaa ggtcaggaca tcatcgcctt agacgttcaa ggcaaatcca gcatcaccga
    10321 ctgcatgatc atctgtacgg gtacgtccag ccgtcatgtt atgtccattg ctgaccacgt
    10381 tgtgcaggag tctcgcgcag cgggcctgtt accgctcggc gtagaaggtg aaaacagcgc
    10441 cgactggatt gtcgtggatt tgggcgatgt gattgtccat gtcatgcagg aagagagccg
    10501 tcgcctgtat gaactggaaa aactctggag ttaatgcgtg aagctgcaac ttgtcgccgt
    10561 gggaacgaaa atgccggact gggtacaaac cggttttacc gagtacctgc gtcgttttcc
    10621 gaaagatatg cccttcgagc tgattgaaat tccggccgga aaacgcggca agaatgcgga
    10681 catcaagcgc atactcgaca aagagggtga gcagatgttg gcggccgcag gcaaaaaccg
    10741 cattgtcacc ctcgatattc caggcaagcc ctgggatacg ccgcagttag ccgctgagct
    10801 ggaacgctgg aagctggatg gtcgcgacgt cagtctactg attggcgggc ctgaagggtt
    10861 gtcgcctgcc tgtaaagcgg cggcggagca gagctggtcg ctgtcggcgc ttaccctccc
    10921 ccatccgctg gttcgcgtgc tggtcgcaga gagtctgtac cgggcgtgga gcatcaccac
    10981 caaccatcct tatcaccgtg agtgataagg gagctttgag tagaaaacgc agcggatgaa
    11041 actacagaac tcttttcgcg actatacggc agagtccgcg ctgtttgtgc gccgggcgct
    11101 ggtcgccttt ttggggattt tgctgctgac cggcgtgctt atcgccaacc tgtataatct
    11161 gcaaattgtt cgctttaccg actaccagac ccgctctaat gaaaaccgca ttaagctggt
    11221 gcctatcgcg cccagccgcg gcattattta cgaccgtaat ggtatccctc tggccctcaa
    11281 ccgcactatc taccagatag aaatgatgcc agagaaagtc gataacgtgc agcaaacgct
    11341 ggacgctttg cgcagcgtgg ttgatctgac cgatgacgat attgctgcat tccgaaaaga
    11401 gcgcgcacgt tcacaccgtt tcacctctat tcccgtgaaa actaacctga ccgaagtaca
    11461 agtagctcgc tttgccgtca atcagtaccg ttttccgggg gttgaagtta aaggctataa
    11521 acgtcgttac tatccttacg gttcggcgtt gacccacgtc atcggctatg tgtcgaaaat
    11581 caacgataaa gacgtcgaac gcctgaataa tgacggcaaa ctggccaact atgcggcaac
    11641 gcatgatatc ggtaagctgg gcattgagcg ttactatgaa gacgtgctgc acggtcagac
    11701 cggttatgaa gaggttgaag ttaacaaccg tgggcgtgtt atccgccagt taaaagaagt
    11761 accaccgcaa gccggacacg atatttacct gacgctggat ctcaaactcc agcaatatat
    11821 tgaaacgctg ctggcgggta gccgcgcagc tgtggtagtc accgatccgc gtacaggtgg
    11881 ggtgctggcg ctggtttcca cgcctagtta tgacccaaac ttgtttgttg acggtatctc
    11941 cagcaaagat tattccgcct tgttgaacga cccgaataca ccgctggtga accgcgccac
    12001 acagggggtt tatcctcccg cgtctacagt taaaccctat gtggcggttt cggcattgag
    12061 cgccggggtg atcacgcgca atacgacgct gtttgaccca ggctggtggc aactgccagg
    12121 ttcggaaaaa cgttatcgtg actggaaaaa atggggccac gggcgtctga atgtcacaag
    12181 atcgctggaa gaatctgcgg ataccttctt ctatcaggtg gcctacgata tggggatcga
    12241 tcgcctctcc gaatggatgg gtaaattcgg ttatggtcat tacaccggta tcgacctggc
    12301 ggaagaacgt tccggcaaca tgcctacccg cgaatggaaa cagaaacgct ttaaaaaacc
    12361 gtggtatcag ggtgacacca ttccggttgg tatcggtcag ggttactgga cagcgacccc
    12421 aatccagatg agtaaggcac tgatgatcct gattaatgac ggtatcgtga aggttccgca
    12481 tttgctgatg agcaccgccg aagacggcaa acaggtgcca tgggtacaac cgcatgaacc
    12541 gcccgtcggc gatattcatt ccggttactg ggagctggcg aaagacggta tgtacggtgt
    12601 tgctaaccgc cctaacggta cgacgcataa atactttgcc agcgcaccgt acaaaattgc
    12661 ggcgaaatct ggtaccgctc aggtcttcgg tctgaaagcg aacgaaacct ataatgcgca
    12721 caaaattgcc gagcgtttac gtgaccacaa actgatgacc gcctttgcgc catacaacaa
    12781 tccgcaagtg gctgtcgcca tgattctgga gaacggcggc gcgggtccgg cggttggtac
    12841 gctgatgcgt cagatcctcg accacattat gctgggtgat aacaacaccg atctgcctgc
    12901 ggaaaatcca gcggttgccg cagcggagga ccattaatca tgacggataa tccgaataaa
    12961 aaaacattct gggataaagt ccatctcgat cccacaatgc tgctgatctt actggcattg
    13021 ctggtttaca gcgccctagt tatctggagc gccagcggtc aggatattgg catgatggag
    13081 cgtaaaatcg gccaaatcgc gatgggtctg gtcatcatgg tggtgatggc gcaaattcct
    13141 ccacgcgttt atgaaggctg ggccccctat ctctatatca tctgtattat tttgctggtg
    13201 gcggtagatg ctttcggtgc catctctaaa ggtgctcaac gctggctgga cctcggtatt
    13261 gttcgttttc agccgtcgga aattgccaaa atagccgtac cactgatggt tgcgcgcttt
    13321 atcaaccgcg acgtttgccc accgtcgttg aagaacacag gcatcgcgct ggtgctgata
    13381 tttatgccca cgctgctggt ggctgcacag cctgacctgg gaacatcaat cctcgttgcg
    13441 ctttccggtc tgtttgtact gttcctctct ggccttagct ggcgtctgat tggcgtcgca
    13501 gtagtgctgg tggcggcgtt cattcctatt ctgtggttct tcctgatgca tgattaccag
    13561 cgccagcgcg taatgatgct cctagacccg gaatcagacc cactcggcgc gggctatcac
    13621 attattcagt ctaaaattgc tattggctcc ggcggattac gcggcaaagg ctggctgcat
    13681 ggcactcagt cacaacttga atttctaccc gaacgccata ccgactttat cttcgcggta
    13741 ctggcggaag agctgggatt agtgggcatt ttgattctgc tcgctctcta cattctgctg
    13801 atcatgcgcg ggctgtggat agccgccaga gcgcaaacca cctttggtcg cgtcatggct
    13861 ggcggcttaa tgctgatatt attcgtttat gtcttcgtaa atattggtat ggtaagcggt
    13921 attctgccgg ttgtaggggt tccgctccca ctggtcagtt atggaggatc agcgctaatt
    13981 gtgctgatgg ctgggttcgg gattgtaatg tcaatccaca cccacaggaa aatgttgtcg
    14041 aaaagcgtgt aagaggtgcg caatgcgtaa gcagtggctc gggatctgca tcgcggcagg
    14101 aatgctcgcg gcatgtacaa gcgatgatgg tcagcaacag acggtaagtg taccgcagcc
    14161 tgcggtatgt aacggcccca tagttgaaat tagcggggcg gacccgcgtt tcgaaccact
    14221 gaacgcgacg gcaaatcagg attaccagcg cgacggtaaa agctacaaaa tcgtgcagga
    14281 tccgtctcga tttagccagg cgggactggc ggcaatctat gatgccgaac caggcagtaa
    14341 cctgacggcc tctggcgaag ctttcgatcc gacacagctg acggcggccc atccaacgct
    14401 tccgatcccc agctacgcca gaatcactaa cctggctaac gggcgaatga tcgtggtgcg
    14461 cattaatgat cgcggccctt acggcaacga ccgcgttatt tcgctttctc gcgcggcagc
    14521 tgaccgtctt aacacgtcaa acaacaccaa agttcgtatc gatccgatta ttgtcgccca
    14581 ggatggttcg ctttctggtc ctggtatggc ttgtaccaca gtcgccaaac agacttacgc
    14641 cctgcctgca cctcccgatt taagcggtgg cgcgggaaca agttcagtgt ctggcccgca
    14701 gggtgacatt cttccggtca gtaattcgac gctaaaaagc gaagatccga ccggcgcgcc
    14761 ggtaaccagt agcggtttcc tcggcgcacc aacgacctta gcgcctggtg tactggaagg
    14821 cagcgaaccg acgcctgcgc cacagcccgt tgttacagct ccgtcgacaa cgcctgcaac
    14881 ctcgcctgca atggtgacac cgcaagccgc ctcgcaaagc gccagcggca actttatggt
    14941 gcaagtcggg gccgttagcg atcaggctcg tgcgcaacag taccaacagc aactgggaca
    15001 gaagttcggc gtccccggtc gcgtaactca aaatggcgcg gtctggcgga tccagcttgg
    15061 ccccttcgcc agcaaagccg aagccagtac cttgcagcaa cgtttgcaaa ccgaagccca
    15121 attacagtca tttattacca ccgcgcagta gcgtaaagca ggcatctgat gtgtcaattt
    15181 ctgtaaatga cgttaacaaa gtcacgcgga aagtcagatg cctgccggta gtgcatttgc
    15241 tatagtaggg cacttttttt aattccatca cggatgtcgt agttcagacc atgaatacca
    15301 ttttttccgc tcgtatcatg aagcgcctgg cgctcaccac ggctctttgc acagccttta
    15361 tctctgctgc acatgccgat gacctgaata tcaaaactat gatcccgggt gtaccgcaga
    15421 tcgatgcgga gtcctacatc ctgattgact ataactccgg caaagtgctc gccgaacaga
    15481 acgcagatgt ccgccgcgat cctgccagcc tgaccaaaat gatgaccagt tacgttatcg
    15541 gccaagcaat gaaagccggt aaatttaaag aaactgattt agtcactatc ggcaacgacg
    15601 catgggccac cggtaacccg gtgtttaaag gttcttcgct gatgttcctc aaaccgggca
    15661 tgcaggttcc ggtttctcag ctgatccgcg gtattaacct gcaatcgggt aacgatgctt
    15721 gtgtcgccat ggctgatttt gccgctggta gccaggacgc ttttgttggc ttgatgaaca
    15781 gctacgttaa cgccctgggc ctgaaaaaca cccacttcca gacggtacat ggtctggatg
    15841 ctgatggtca gtacagctcc gcgcgcgata tggcgctgat cggccaggcg ttgatccgtg
    15901 acgtaccgaa tgaatactcg atctataaag aaaaagaatt tacgtttaac ggtattcgcc
    15961 agctgaaccg taacggcctg ttatgggata acagcctgaa tgtcgacggc atcaaaaccg
    16021 gacacactga caaagcaggt tacaaccttg ttgcttctgc gactgaaggc cagatgcgct
    16081 tgatctctgc ggtgatgggc ggacgtactt ttaaaggccg tgaagccgaa agtaaaaaac
    16141 tgctgacctg gggcttccgt ttcttcgaaa ccgttaaccc actgaaagta ggtaaagagt
    16201 tcgcctctga accggtttgg tttggtgatt ctgatcgcgc ttcgttaggg gttgataaag
    16261 acatgtacct gaccattccg cgtggtcgca tgaaagatct gaaagccagc tatgtgctga
    16321 acagcagtga attgcatgcg ccgctgcaaa agaatcaggt cgtcggaact atcaacttcc
    16381 agcttgatgg caaaacgatc gagcaacgcc cgctggttgt gttgcaagaa atcccggaag
    16441 gtaacttctt cggcaaaatc attgattaca ttaaattaat gttccatcac tggtttggtt
    16501 aaaaattaaa cacttgaaag tgtaatttcc gtccccatat actaagcatc agtaaaaaaa
    16561 ctcccgcctt ctggcgggag ttgctattta attacgttac gccggagctg acatgaaaac
    16621 caaacttaac gaactgcttg aattccctac tccttttact tacaaagtta tggggcaggc
    16681 gttacctgag ctggttgatc aggtggttga agtggtacag cgccatgcgc caggtgacta
    16741 caccccaacg gtaaaaccaa gcagcaaagg caactaccac tcggtatcta tcactatcaa
    16801 cgccactcat atcgagcagg ttgaaatact gtatgaagaa ctgggcaaaa tcgatattgt
    16861 ccgcatggtt ctgtaactcg cttctccgtt acccggctcc tggtcgggta actcccctct
    16921 cctcgctgtg atatactttt cccccacttt tactcattct ccacggagat gccgttttgt
    16981 atcaggataa aattcttgtc cgccagctcg gtcttcagcc ttacgagcca atctcccagg
    17041 ctatgcatga attcaccgat acccgcgatg atagtaccct tgatgaaatc tggctggtcg
    17101 agcactatcc ggtattcacc caaggtcagg caggaaaagc ggagcacatt ttaatgccgg
    17161 gtgatattcc ggtgatccag agcgatcgcg gtgggcaggt gacttatcac gggccgggac
    17221 aacaggtgat gtatgtgttg cttaacctga aacgccgtaa actcggtgtg cgtgaactgg
    17281 tgaccttgct tgagcaaaca gtggtgaata ccctggctga actgggtata gaagcgcatc
    17341 ctcgggctga cgcgcctggt gtctatgtcg gggaaaagaa aatttgctca ctgggtttac
    17401 gaattcgacg cggttgttca ttccacggtc tggcattaaa cgtcaatatg gatctttcac
    17461 catttttacg tattaatcct tgtgggtatg ccggaatgga aatggctaaa atatcacaat
    17521 ggaaacccga agcgacgact aataatattg ctccacgttt actggaaaat attttagcgc
    17581 tactaaacaa tccggacttc gaatatatta ccgcttaatt ccatacatca atggcccaat
    17641 ttacactggg tcattactca taatacctgc taatgcttta catctccttc gcgtttgtat
    17701 attttcttta tcacttgcag aaatgaggtg ccacgccttg ctccgtaact caccccattg
    17761 attaacctat tgaaatagtt gattatggtg agcaaaagcg ttccgttcca attagacata
    17821 agattattgt aattttttaa atattatttt tccatgaata aaattggagt aagtgcgtgg
    17881 atagtaataa tcaaattgaa ccctgtttaa gcagaaagtc gtcagaaggt aaaccacaaa
    17941 tatttacaac cttacgaaat attgctctta accttctgac tatttttgaa gctgtatatg
    18001 tacataaagg gatcgttaat gcagcgaaag tgcttaatct gcccccctcg gcaatcagtc
    18061 agtctattca gaaactgcgc gttatattcc ctgacccatt gtttattcgc aaaggccaag
    18121 gtgtcactcc taccgcattt gcgatgcatc tacatgagta tatcagtcag ggccttgagt
    18181 ccattcttgg cgcgctggat atcgaaggaa gctatgataa gcaacgaacg ataactattg
    18241 cgaccactcc ctcggtcgga gccctggtcc ttcctgtcat ctatcgggcg attaaaactc
    18301 actatccgca gcttttactg cgcaacccgc ccatcagcga cgcggaaaac caactcagtc
    18361 agtttcaaac cgatctcatc atcgataaca tgttttgcac caatcgtacg gtgcaacatc
    18421 atgttctgtt caccgacaat atggtgttaa tttgccgcga gggaaatcca ctactctctt
    18481 tagaagatga cagagagact atcgacaacg ctgcgcatgt acttctgtta ccggaagagc
    18541 aaaatttcag cggtctgcgg cagagagttc aagaaatgtt tccggaccgg caaatcaatt
    18601 tcaccagcta caacattttg acaatcgctg cactggttgc caacagtgac atgttagcga
    18661 ttattcccag ccgtttttat aacctgttta gccgctgctg gccgctggaa aaactgcctt
    18721 ttccgtcctt aaataaggag caaatagatt tctctatcca ctacaacaaa ttcagcctgc
    18781 gtgatcccat cctgcacgga gtaatagatg ttatccgtaa tgcattttga aaaagtattg
    18841 ttacagccag atcacagcgc agaacgataa aatggcacaa tccaacaaca attttacatt
    18901 ttcgcgaccg ctttggctgc tttcaggtcc gtttcaatga tatactgcca gtcgttaatt
    18961 caaaaatagt tgataattac aacaatctat tgaattgaaa cgctttcctt cgtaattcgc
    19021 aactggaaca cgcacgctat gagtaaaccc attgtgatgg aacgcggtgt taaataccgc
    19081 gatgccgata agatggccct tatcccggtt aaaaacgtgg caatagagcg cgaagccctg
    19141 ctgcgcaagc cggaatggat gaaaatcaag cttccagcgg actctacacg tatccagggc
    19201 atcaaagccg caatgcgcaa aaatggcctg cattctgtct gcgaggaagc ctcctgccct
    19261 aacctggcgg aatgcttcaa ccacggcaca gcaacgttta tgatcctcgg cgctatttgt
    19321 acccgccgtt gtccgttctg tgatgttgcc cacggtcgcc cggtagctcc tgatgccaat
    19381 gaaccagtga aactggcgca gaccattgcc gatatggcgc tgcgttatgt ggttatcacc
    19441 tccgttgacc gtgatgacct gcgcgatggc ggtgcccagc actttgcgga ttgcattact
    19501 gccattcggg aaaaaagccc gcaaatcaaa attgaaactc tggtgccgga tttccgtggt
    19561 cgtatggatc gtgctctgga tattctgact gcaacgccac cagatgtgtt caaccataac
    19621 ctggaaaacg taccgcgtat ttaccgtcag gtacggcctg gtgcagatta caactggtcg
    19681 ctgaagctgc tggaacgctt taaagaagcg catccggaaa tcccgaccaa gtctggtcta
    19741 atggtgggac tgggtgaaac caatgaagaa attattgagg taatgcgcga cctgcgccgt
    19801 catggtgtga cgatgttaac gctggggcaa tatttgcagc caagccgcca tcacctgccg
    19861 gttcaacgtt acgttagccc ggatgagttc gacgaaatga aagccgaagc gctggcgatg
    19921 ggctttaccc atgctgcatg cggtccgttt gtccgttctt cttaccacgc cgatttgcag
    19981 gcgaaaggga tggaagttaa gtaatcctgt aataattact tacatctgtc tgataaaaaa
    20041 cccgcttttt gaagcggttt ttttgtatcg aacaagatat tgagggagcg tcctgctcgc
    20101 cacgtcactc tttatgagag agcttttcag cctgaagatc aacgtctgcg ccttttttcg
    20161 ccgcagcatc atcatcattc atcgccttct tgaacccttt aatggccgct ccaaggtctc
    20221 cgcccagcgt acgtaacttc ttagtcccaa acagcagaac gaccagcgcc gcaactacta
    20281 gcagtttggt aatactaatc tcacccatag ataccttctt gacatataac cggcaacaga
    20341 acgcgcctta aaaaccagag aatattaacg gtcattcgac gcgcgcacac aatagcaatc
    20401 tgtaacaagg tgaatcaagc gccgagtaaa aaaacatcat aataattgcg gcggcgcaaa
    20461 gcgacggttg tttaagacgg gcagttgcgc gcgcacctga cgcacacgtt cgggcgtcac
    20521 ttccgccata atgagtgcag gcatttctga cgctgccgca atggtgacgc caaaaggatc
    20581 tataatccgg ctttgcccga tatttttgtt cccgcactcg cccgccgcca ccatataaca
    20641 ggtggtatcc agcgcacgag cggcaagcaa cgttgaccag tgatgctctt tgagcggccc
    20701 gcgaacccag gcggcaggaa gtaccaggat ttcagctccc tgtaatgcct gtgccagcgc
    20761 cagctctgga aagcgtaagt cataacaggt catcagaccg accttcatcc cttccacctc
    20821 cagtaacgga gcgatttcat taccagcatc aacacggcgt gattcctgaa tggcaaatgc
    20881 atcatagaga tgcagtttgg cataacgggc gacgatgttt cctgcctgaa gtgccaccag
    20941 catattccat gcgcgccccg gcgttgaagg aacatgaatc gtcagaattg tcgtcatcat
    21001 gttacgttta ctttctcgcc gtaaacgtcc gaggaattcg ccttccagca gctgtgctga
    21061 tttaaccgat agatctgcat catgatcatc gcgtgccagc aatgcttccg gcaggacaaa
    21121 cagcgatacg tcgttttccg ccgcctgcgc catcaacgag gcacaaatct cagcgttctt
    21181 ttcccacaca gatgtaacag caaactgtcc tgcagcaacc agcattgcca cctcctgtca
    21241 gagtcgtaaa attcgccaac gacgattatt cggcgttaca cttatcactc atacaaatca
    21301 aatagcagga ttttgcagtg ttacaacttc ttttagcagt ttttattggc ggtggtacgg
    21361 gaagcgtggc gagatggctg ttaagtatgc gatttaaccc actgcatcag gcgattccgt
    21421 tggggacgct gacagcaaac ctgattgggg cattcatcat aggaatggga ttcgcatggt
    21481 tcagcaggat gacgaacatt gatccagtgt ggaaagtatt aatcaccacc ggattttgtg
    21541 gcggtctaac aaccttctca acattttcgg cagaagtggt gtttttgtta caagagggtc
    21601 gctttggctg ggcattactg aacgttttcg tcaaccttct ggggtctttt gccatgacag
    21661 cactggcttt ctggctgttt tcggcctcaa ccgcacacta aagacccaaa aaaaacccgc
    21721 tgattaagcg ggttttgaat tcttgctgac gtatcttaca gagcgattac gtttgcagca
    21781 gaagggcctt tggcaccgtt agtgatttcg aactctacgc gctgaccttc agcaagagtt
    21841 ttaaaaccat tagtctggat tgcagagaag tgtacgaaca cgtctttgct gccgtcttcc
    21901 ggagtaatga aaccgaatcc tttggactca ttaaaccact taacgttacc tttaatctta
    21961 gacatcaaaa ttacctttac atgaaaaata gacacaaatg ctgcgtcggt taccagtaca
    22021 ccaattgtgg tacgctttgt ccagtgcaac tttactaaaa agtgataaaa gtcgcgttat
    22081 ttttgatgtt acttatttta gctattgatt ttaaagaagt tactaaaact tcatttgtct
    22141 caaaactgaa agcgcatcca ggcaaagtac acattgccat tgttgtaggt acccggaatg
    22201 taggtcatct gaaaagtcac tgggccataa cccacggagg ccaatggcag tagaaccggg
    22261 agagggatgt aattccagtt atcgcgtgcc gttacgccag cggtgaatcc cagacctaaa
    22321 tgaaaatttt catccgccag cggtcgccag gtactttccc atccgtatcc ggcaatcggt
    22381 tcccatttgt tccacgagtc cttaaatgcc atggcataca ggccatgcca gtttcctttt
    22441 tcatcccaac gcgacaggcc aaaaccgcca ccccacggtc gctcgttata gcgatcggtt
    22501 ttttctttgt cgtaagcgaa acgtgcatgc caggtgatgg caggaatata taaatcataa
    22561 tgttcaggct gttgccaggt tggtgcaata ttttctctaa acgttgtcat ccactcatct
    22621 gcgttagcaa aaactttacc aacgctgatt aactgaataa aaacaaagga aaagatagcg
    22681 acatatttac tcacgttcat ttgtgaccat aaaacattta tcaaaaatct actactagca
    22741 tagcaaagct acaattaaca taaccttaat agacccaaca taaagaataa tctgaatagc
    22801 tgctctattt atttccgctt gttcaagtta aatatttccg cgcatcgatt aaagatgatg
    22861 cgtcgttttc tgcgatggga atagtcaaaa aagaaaaacc aagtcttttt tgatgacaaa
    22921 atgcaatcaa ggaaaaatta ttttattttt taacgagata caacaatcac cttaacaaag
    22981 tatataatat atatcgtcaa cctatgctca tattagatta ttttttgagc gcacagccgc
    23041 agctaacacc attgcaatta acaaatttgc atcaatccac catcaatttg cacacattat
    23101 tatgtgataa ttgccaaccg ctaaatatgc gttttgttat ctatgtataa aaacagtaac
    23161 ttcaatgtct taatggcagt ttttcttgat tttaatcagc attcatcgcc aatttattgg
    23221 gcatattttt tccttaagct ttaggaattt tttattattt actttggggc ctggagacag
    23281 gaaaaattat gctgacattc attgaactcc ttattggggt tgtggttatt gtgggtgtag
    23341 ctcgctacat cattaaaggg tattccgcca ctggtgtgtt atttgtcggt ggcctgttat
    23401 tgctgattat cagtgccatt atggggcaca aagtgttacc gtccagccag gcttcaacag
    23461 gctacagcgc cacggatatc gttgaatacg ttaaaatatt actaatgagc cgcggcggcg
    23521 acctcggcat gatgattatg atgctgtgtg gatttgccgc ttacatgacc catatcggcg
    23581 cgaatgatat ggtggtcaag ctggcgtcaa aaccattgca gtatattaac tccccttacc
    23641 tgctgatgat tgccgcctat tttgtcgcct gtctgatgtc tctggccgtc tcttccgcaa
    23701 ccggtctggg tgttttgctg atggcaaccc tatttccggt gatggtaaac gttggtatca
    23761 gtcgtggcgc agctgctgcc atttgtgcct ccccggcggc gattattctc gcaccgactt
    23821 caggggatgt ggtgctggcg gcgcaagctt ccgaaatgtc gctgattgac ttcgccttca
    23881 aaacgacgct gcctatctca attgctgcaa ttatcggcat ggcgatcgcc cacttcttct
    23941 ggcaacgtta tctggataaa aaagagcaca tctctcatga aatgttagat gtcagtgaaa
    24001 tcaccaccac tgctcctgcg ttttatgcca ttttgccgtt cacgccgatc atcggtgtac
    24061 tgatttttga cggtaaatgg ggtccgcaat tacacatcat cactattctg gtgatttgta
    24121 tgctgattgc ctccattctg gagttcctcc gcagctttaa tacccagaaa gttttctctg
    24181 gtctggaagt ggcttatcgc gggatggcag atgcgtttgc taacgtggtg atgctgctgg
    24241 ttgccgctgg ggtattcgct caggggctta gcaccatcgg ctttattcaa agtctgattt
    24301 ctatcgctac ctcgtttggt tcggcgagta tcatcctgat gctggtattg gtgattctga
    24361 caatgctggc ggcagtcacg accggttcag gcaatgcgcc gttttatgcg tttgttgaga
    24421 tgatcccgaa actggcgcac tcttccggca ttaacccggc gtatttgact atcccgatgc
    24481 tgcaggcgtc aaaccttggc cgtacccttt cgcccgtttc tggcgtagtc gttgcggttg
    24541 ccgggatggc gaagatctcg ccgtttgaag tcgtaaaacg cacctcggta ccggtgcttg
    24601 ttggtttggt gattgttatc gttgctacag agctgatggt gccaggaaca gcagcagcgg
    24661 tcacaggcaa gtaaatagta atgccggagg caagtttcct ccggctttat catgtcaccc
    24721 actgtggtat atgcgttgtg gtctgccaac tttgccgtga acaatttcag caataatcag
    24781 atggcggctg gcgcaatatt caagataacg tctggcagac gtgcggctga tggtcagtgc
    24841 ctgcgccacc gtttctgccg tatgttgcac accaggctct ttaaacagtt ttcgcaccgc
    24901 gtttagcgtc aagggatcaa tgccggtcgg cagttcgtct ttaggttcac cgcgagcata
    24961 ggcattaaac atctcatcaa tttgcttctg gctggcgcta tcaatacttt ccagcatatg
    25021 tttacgctgg cggaaacggg ttagcgtttg ccccagccgt tcataggcaa tgggcttaat
    25081 gagataatca aatacaccac aacgtacggc ttcagacacc gtttccatat cgctggctgc
    25141 agtggtaaac accacgtcgc cgggataatg cgcctgcacc agttcatgca ataaattaat
    25201 ccctctgccg tcaggaagat agttatcgag caagattagc cccggcttaa aacgctcgat
    25261 catcattcgg gcctgcgcca ggtttcccgc cagtaatatc tgactgaatc cgggaatgtg
    25321 acgaatatat tccgcatgca tctctgccag cggcgtttcg tcctcaacga tcaatagggt
    25381 taatggagct gtcattaggt ttcactttcg gaatatagat tgaaaataag gtaccgcagg
    25441 gatcattatc ttcgagagtg ataacaccac cgcagcgcgt tacgtagctg gcaatcaagt
    25501 acaacccaat gccatgttca ccgggctcgt cagcacgcgt actgaccccc tgctcaaata
    25561 ttttgtctcg tagagactct ggaacgccgc agccctgatc ggcgacttca atcaccacat
    25621 catcgccttc atcgctgagg aataattcaa cgatcttgtt tccttcatcg ctacgcaggc
    25681 tggcttcgaa ggcgttatca agtaaattgc ccacaatggc tgcaaactcg gtgctatcca
    25741 gtcctggcgg cagttgcgaa agctggctac cggggacaat gatcattttt agccccagtt
    25801 cccgggcgcg ctgcacttta ccaaaaagca gccccgccac ctagcgatcg gcaaacgcct
    25861 cgcgcaggct gtcaataagc tgttgctggg cctgagactc cccctgcacc atcgccagca
    25921 cgcgatcata ctctttcatc tgcaacagac cattgagcgt cgacatccaa ttgagatgct
    25981 cgtgtcgcaa tgtacgaagg ctctcaacgt attgttttat ttgcgtcagt tgcgcattga
    26041 gggtggaaat ttcgtcttta ctgcgaaagc tgataatggc ccccagcaaa tcatcacctg
    26101 aacgaatagc ttcccgattg gcaataacgc tcagaccgtt aaagttagcc accatatcct
    26161 gacgtttttc atcaatctgt tcggtaaaga aatcggcggg cctgaccact tcagcaatgg
    26221 gtttacccaa ccattgccgt ccgggggaac tcagccccag catctttctt gcgttacgat
    26281 tgatggcggt aatgtaaccg tgcggatcca ccgcaatcag cccttcataa accgaactaa
    26341 acagcgcctc ttgctgacgg accacgcgtg cgatttgctt tggctccatg cccatcatct
    26401 gccgacggat atgcgcggcc aggaaccacg acagcaacat cagaatccct aacagcacga
    26461 caaacacacc tgccatcggt aataaaaact cagcccgcca gctatcgatt ttactcacca
    26521 ggtagccaat cgacaccacg ccgatgactt ttccatcgtc atcaaagatt ggcgttttgg
    26581 cgcgcatcgc catccccatt gaccctttcc cggtaatgaa gtagctctcc cctttctcca
    26641 gcgcgccctg tttggtgaac tgcataggat aaccaatttt ctccggatta ggatggtaaa
    26701 ggcggatcga gtgccggtcg ccatcaccac ataatcaaaa tcggtatctc tttgtaattt
    26761 gttagcgatg gtcgccagcc gtttgtagtc acgcgttttc accgcagaga tgacactgtc
    26821 attggaggca ataattttcg cctgattcat tgccatgtcg cgtacatgaa gcgttaaata
    26881 gtcctcaaaa ctggccgtaa aatattgcgc caaggctgca atgacaaata ttgagaacac
    26941 cagaatcagc aaaaagatac gcagcggaaa tgccagtctt tggaaaaatg caaactgttt
    27001 attctcgtta agctgcaaca ttgttttcct tgcgggttat cccgagcctc tttgacagat
    27061 gtaattaaaa tgttgaatca aaatacatag atattaatta tgatcgtggc aaattttatt
    27121 cattaaatca attaaatcac ttaaacctgc aggtcatttc gtaattacat taattaaaaa
    27181 acttaaacca ttaaataaat aaaaatttca cgccgaaata ctccttagga tgtatagcga
    27241 aaggagaaaa agatatacct cgatcacccc cctttctccc aagtgaaaat aaaaggttat
    27301 cagtttgcaa cattgaacaa cattcgttgc aaatcgataa caacatgcac cttcaggata
    27361 ctatttatta tgttcggcaa tgatattttc acccgcgtaa aacgttcaga aaataaaaaa
    27421 atggcggaaa tcgcccaatt cctgcatgaa aatgatttga gcgttgacac cacagtcgaa
    27481 gtatttatta ccgtaacccg cgatgaaaag cttatcgcgt gcggtggaat tgccggaaat
    27541 attattaaat gcgttgctat cagtgaatcc gttcgcggtg aaggactggc gctgacatta
    27601 gccactgaac tgataaacct cgcctatgag cggcacagca cgcatctgtt tatttatacc
    27661 aaaaccgaat acgaggcgct gttccgccag tgcggttttt ccacgctgac cagcgtaccc
    27721 ggcgtgatgg tgctgatgga aaacagcgcc acgcgactga aacgctatgc cgaatcgctg
    27781 aaaaaatttc gtcatccagg gaacaagatt ggctgcattg tgatgaacgc caatcccttt
    27841 acgaatggtc accgttatct gattcaacaa gctgcggcac agtgcgactg gttgcatctg
    27901 tttttagtca aagaagattc ttcacgcttc ccctatgaag accggctgga tctggtgtta
    27961 aaaggcaccg ccgatattcc acgcctgact gtgcatcgcg gctccgaata catcatctcc
    28021 cgcgctacgt tcccttgcta cttcattaaa gaacagagcg tcattaacca ttgttacacc
    28081 gaaattgatc tgaagatttt ccgtcagtac ctcgctcccg cactgggtgt aactcaccgc
    28141 tttgtcggta ctgaaccctt ttgtcgcgtt accgcccagt acaaccagga tatgcgctac
    28201 tggctgaaaa cgccgactat ctccgcaccg cccatcgaac tggttgaaat tgagcggctg
    28261 cgttaccagg agatgccgat atccgcttcc cgggtacgtc aactgctggc gaaaaacgat
    28321 ctcacggcta tcgcgccgct ggtccctgca gtcacgctgc attatttgca gaacctgctt
    28381 gagcactccc gccaggacgc ggcagctcgt caaaagaccc ccgcatgaga aacaggtgaa
    28441 aaatgaaaat aaaccagccc gccgttgcag gcacccttga gtctggggat gtgatgatac
    28501 gcatcgcccc actcgatacg caggatatcg acctgcaaat caacagcagc gttgagaaac
    28561 agtttggcga tgcaattcgc accaccattc tggacgttct cgcccgctac aacgtgcgcg
    28621 gcgtacagct gaatgtcgat gacaaaggca cactggactg cattttacgt gcacgactgg
    28681 aagccctgct ggcacgcgcc agcggtatcc cgactctgcc atgggaggat tgccaatgat
    28741 ttccgcttcg ctgcaacaac gtaaaactcg cacccgccgc agcatgttgt ttgtgcctgg
    28801 tgccaatgcc gcgatggtca gcaactcctt catctacccg gctgatgccc tgatgtttga
    28861 cctcgaagac tccgtggcat tacgtgaaaa agacaccgcc cgccgcatgg tttatcacgc
    28921 gctgcaacat ccgctgtatc gcgatattga aaccattgtg cgtgtcaacg cgctggattc
    28981 cgaatggggt gttaacgacc tggaagccgt cgttcgcggt ggtgcggacg ttgtgcgtct
    29041 gccgaaaacc gataccgctc aggatgttct ggatattgaa aaagagatcc tgcgtatcga
    29101 aaaagcctgt ggtcgtgaac ccggcagcac cggcctgctg gcggcgattg aatctccgct
    29161 gggcattacc cgcgcagtgg aaatcgctca cgcttccgag cgtttgatcg gtatcgccct
    29221 cggtgcagaa gactatgtgc gcaacctgcg tacagaacgc tccccggaag gaactgaact
    29281 gctgttcgca cgctgttcca ttttgcaggc cgcgcgctct gcgggtattc aggcgttcga
    29341 taccgtctat tccgacgcta acaacgaagc cggattcctg caagaagccg cccacatcaa
    29401 acagctgggc tttgacggca aatcgctgat caacccgcgt cagattgatc tgctgcacaa
    29461 cctctacgca ccgacccaga aagaagtgga tcacgcccgc cgcgtcgtag aagccgctga
    29521 agccgccgct cgcgaaggcc tcggcgtggt ttccctgaac ggcaagatgg tggacggtcc
    29581 ggttatcgat cgcgcccgtc tggtgctctc ccgtgcagaa ctttccggca tccgcgaaga
    29641 ataaggcaat caaaatgacg cagaaaattg aacaatctca acggcaagaa cgggtagcgg
    29701 cctggaatcg tcgcgctgaa tgcgatcttg ccgctttcca gaactcacca aagcaaacct
    29761 accaggctga aaaagcgcgc gatcgcaaac tgtgtgccaa cctggaagaa gcgattcatc
    29821 gctctggttt acaggacggc atgacggttt ccttccatca cgctttccgt ggcggtgacc
    29881 tgaccgtcaa tatggtgatg gacgtcatcg cgaagatggg ctttaaaaac ctgactctgg
    29941 cctccagctc cctgagtgat tgccatgcgc cgctggtaga acacattcgc cagggcgtgg
    30001 ttacccgcat ttatacctct ggcctgcgcg gtccactggc ggaagaaatc tcccgtggtc
    30061 tgctggcgga accggtgcaa atccactctc acggcggacg tgtgcatctg gtacagagcg
    30121 gcgaactgaa tatcgacgtg gctttcctcg gcgtcccatc ctgtgatgaa ttcggtaatg
    30181 ccaacggtta caccggtaaa gcctgctgtg gctccctcgg ctatgcaatg gttgatgccg
    30241 acaacgcaaa acaggtcgtg atgcttaccg aagaactgct gccttatccg cataatccgg
    30301 caagcattga gcaagagcag gttgatttga tcgtcaaagt tgatcgcgtt ggcgatgctg
    30361 caaaaatcgg cgctggtgcg acccgtatga ccactaaccc gcgcgaactg cttattgccc
    30421 gtagcgctgc ggatgtgatt gtcaactctg gctacttcaa agaaggtttc tccatgcaaa
    30481 ccggcaccgg cggcgcttcg ctggcggtaa cccgtttcct ggaagacaaa atgcgtagcc
    30541 gcgatattcg cgccgacttc gccctcggcg gtattactgc aacgatggtt gatctgcacg
    30601 aaaaaggtct gatccgcaaa ctgctggatg tgcagagctt tgacagccat gctgcgcaat
    30661 cgctggcccg taaccccaat cacatcgaaa tcagcgccaa ccagtacgct aactggggtt
    30721 cgaaaggcgc atcggttgat cgtctcgacg tggtggtact gagcgcgctg gaaattgaca
    30781 cccagttcaa cgttaacgtg ctgaccggct ctgacggcgt actgcgtggt gcttccggtg
    30841 gtcactgcga taccgcgatt gcctctgcgc tttccatcat cgtcgcgccg ctggtacgcg
    30901 gtcgtattcc gactctggtg gataacgtgc tgacctgcat caccccgggc tccagtgtcg
    30961 atattctggt cacagaccac ggtatcgcag ttaacccggc acgtccggag ctggcagaac
    31021 gtctgcagga agcgggcatt aaagtggttt ccattgagtg gctgcgtgaa cgtgcgcgtc
    31081 tgctgaccgg tgaaccacag ccgattgaat tcaccgaccg cgtcgttgcc gttgtgcgtt
    31141 accgcgatgg ctcggtgatc gatgttgtac atcaggtgaa ggaataagcc atgcacctgc
    31201 ttcctgaact cgccagccac catgcggtgt caattcccga gctgctcgtc agccgggatg
    31261 aaaggcaagc acggcaacac gtctggctca agcgccatcc tgttccactg gtctccttta
    31321 ccgtggttgc gcctaggccg attaaagaca gtgaggtcac acgccgaatt tttaatcatg
    31381 gcgtgacagc cttgcgtgcc ttagccgcaa aacagggctg gcaaattcag gagcaggctg
    31441 cactggtttc cgccagcggg ccggagggta tgttgagcat tgccgccccg gctcgcgacc
    31501 tcaagctcgc caccattgag cttgaacata gtcatcctct cgggcggtta tgggatatcg
    31561 atgtcctgac gcccgaaggc gaaattctct cccgccgcga ctattcactg ccgcctcgcc
    31621 gctgcctgtt gtgcgagcaa agcgcagccg tctgcgcgcg tggaaaaccc atcaactgac
    31681 cgatttactc aaccgcatgg aggcactgct gaacgatgtc gatgcctgca acgtcaacta
    31741 aaaccacaaa gcttgcgacg tcattaatcg atgagtacgc cctgctgggc tggcacgcca
    31801 tgctgactga agtcaatctg tcaccgaaac caggtctcgt ggatcgcatt aactgcggtg
    31861 cgcataaaga tatggcgctg gaagatttcc accgcagcgc gctggcgatt cagggctggc
    31921 taccccgttt cattgaattt ggtgcctgta gtgcggaaat ggcaccagaa gcggtactcc
    31981 acggattacg cccaattggt atggcttgcg aaggtgatat gttccgcgcc accgcgggcg
    32041 taaacacgca taagggcagc attttttctt tagggctact gtgtgcggca attggccgtt
    32101 tgcttcagct caaccagtcg ctaacgccaa caaccgtttg ttctacggcg gcaagtttct
    32161 gccgtggcct gaccgatcgc gaactgcgta ccaataattc acaactgacg gcaggtcaac
    32221 ggttgtacca gcagcttgcc cttaccggcg cacgcggtga agccgaagcg ggttatccac
    32281 tggtgatcaa ccacgccttg ccgcattacc tcactctgct ggatcagggg ttagatcctg
    32341 aactggcatt gctcgatacc ttgctcctac tgatggcgat caacggcgat accaacgttg
    32401 cttcgcgcgg tggcgagggg gcctgcgctg gctacagcgc gaggcgcaaa cattattgca
    32461 aaaagggggc attcgaaccc ccgccgatct cgattatctc cggcagttcg acagggagtg
    32521 tatcgaacga aatctcagtc taggcggcag tgccgacctg ctgatcctta cctggttttt
    32581 agcacagatt taattattta agcacttgat aaatttggaa atattaattt tcggagaacc
    32641 cgtatgtctt tagcaaaaga taatatatgg aaactattgg ccccactggt ggtgatgggt
    32701 gtcatgtttc ttatccctgt ccccaacggt atgccaccac aggcatggca ttacttcgct
    32761 gtgtttgtgg caatgattgt cggcatgatc ctcgagccaa ttccggcaac agcgatcagt
    32821 tttattgcgg ttactatttg cgttattggc agtaattacc tgctctttga tgccaaagaa
    32881 ttagctgacc cagcgtttaa tgcgcaaaaa caggcgctga aatggggtct ggctggtttt
    32941 tccagcacca cggtatggct ggtatttggc gcatttattt ttgcattagg gtatgaagtt
    33001 tccgggttag gtcgtcgcat tgcccttttc ctggtgaaat tcatgggcaa acgcacgctg
    33061 acgttgggtt atgcgattgt cattatcgac attctgctgg cgccgtttac accgtccaac
    33121 accgcgcgta ccgggggtac ggtttttccg gtcattaaaa acctgccgcc gttgtttaaa
    33181 tcattcccca acgatccgtc cgcgcgtcgt attggcggct atttgatgtg gatgatggtc
    33241 attagtacca gtctgagttc gtccatgttt gtcaccggtg cggcaccaaa cgtgctgggt
    33301 ctggagttcg tcagcaaaat tgccggtatc cagattagct ggttgcagtg gttcctctgc
    33361 ttcctgccgg ttggggttat cttgcttatc attgcgccgt ggctttccta cgtgctgtac
    33421 aaaccggaaa tcacacacag tgaagaagtg gcaacctggg cgggtgatga actgaaaacc
    33481 atgggtgcgc tgacacgcag agagtggaca ctgattggcc ttgtattgct cagcttaggt
    33541 ttgtgggttt ttggcagtga agtcattaat gctactgcag ttggtctgct ggcagtttcg
    33601 ctaatgctgg ccctgcacgt tgtgccttgg aaagatatta cccgctataa cagcgcatgg
    33661 aacacgctgg tcaacctggc aactctggtt gtgatggcta acggcctgac tcgttctggc
    33721 tttattgact ggttcgccgg taccatgagt acgcacctgg aaggattctc accaaacgca
    33781 acggtgattg tactggttct ggtgttctac tttgcacact acctgtttgc cagcctgtct
    33841 gcgcacaccg caaccatgct gccggttatt ctggccgtcg gtaaaggtat tccgggcgta
    33901 ccaatggaac aactgtgtat cctgctggtg ctgtctatcg gtatcatggg ctgtctgacg
    33961 ccctatgcaa ccggtcctgg ggtgattatt tacggctgtg gctatgtgaa atcaaaagat
    34021 tactggcgtc ttggcgcaat cttcggggtg atttatatct ctatgttgct gttggttggc
    34081 tggccgattc tcgccatgtg gaactaatac gttcgccaaa cgctgaataa atcatcacgc
    34141 ccgccaggta agcccacctg gcgggcgtga tgatttaata gatagtattc agtgtatgta
    34201 tgagttccac acccattatg aaagcattct ggcgtaacgc cgcgttgctc gcggtttctc
    34261 tgcttccctt ctcttctgcc aacgccgtag cgttgcaggc aaaacagtat ggcgattttg
    34321 atcgctatgt cctggccctc tcctggcaaa ccggattttg ccagagtcaa cacgatcgaa
    34381 atcgtaacga acgagatgaa tgtcgcctgc aaaccgaaac gaccaacaaa gctgattttc
    34441 tgaccgtaca tggtctgtgg ccaggattgc ctaaatcggt tgctgcccgt ggtgttgatg
    34501 aacgccgctg gatgcgcttc ggttgcgcta ctcgcccaat cccgaatcta ccagaagcgc
    34561 acgccagccg gatgtgttca tcgccggaaa ccgggttatc actggaaacg gccgctaaac
    34621 taagtgaagt catgccagga gctggcggac gttcctgcct ggaacgctac gaatatgcca
    34681 aacacggtgc ctgctttggt tttgatccgg acgcatactt cggtacgatg gtacgcctga
    34741 atcaagaaat taaagagagc gaagccggaa aattccttgc ggataattac ggtaaaacag
    34801 tgagccgccg tgactttgac gccgcctttg ccaaaagctg gggaaaagag aacgtgaaag
    34861 cagttaagct aacgtgccag ggtaaccctg cgtatttgac tgaaattcag atctcgatca
    34921 aagctgacgc catcaacgct ccgctttctg caaactcatt cttgccacaa ccacacccaa
    34981 gcaactgtgg caaaaccttt gtgattgata aagtgggtta ttaatcatct gatttacaaa
    35041 acacgctaat tcgtcttcca taaac
//
LOCUS       DADKRT010000019        35012 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.019, whole genome shotgun sequence.
ACCESSION   DADKRT010000019 DADKRT010000000
VERSION     DADKRT010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 35012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35012
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.019"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            44..1270
                     /gene="dsdA"
                     /locus_tag="JQ356_000809"
     CDS             44..1270
                     /gene="dsdA"
                     /locus_tag="JQ356_000809"
                     /EC_number="4.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
                     /protein_id="HAY4620982.1"
                     /translation="MAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIE
                     SELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISSSIKARGGIYEVLAHAEKLALE
                     AGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADA
                     RAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAG
                     QRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSP
                     CMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMVRLLDGFYTLSDQTM
                     YDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGG
                     GMVPEEEMNQYLAKGR"
     gene            complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="JQ356_000810"
     CDS             complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="JQ356_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrY"
                     /protein_id="HAY4620983.1"
                     /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
                     SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
                     STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
                     LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG
                     GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
                     GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
                     IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
                     GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS
                     SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA
                     KGVG"
     gene            complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="JQ356_000811"
     CDS             complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="JQ356_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrK"
                     /protein_id="HAY4620984.1"
                     /translation="MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYVYWSMELEDMIS
                     TDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA
                     NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL
                     ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGY
                     IAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV
                     VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM
                     TATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
     gene            4495..5109
                     /gene="evgA"
                     /locus_tag="JQ356_000812"
     CDS             4495..5109
                     /gene="evgA"
                     /locus_tag="JQ356_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system DNA-binding response
                     regulator EvgA"
                     /protein_id="HAY4620985.1"
                     /translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGASAVQRVETL
                     KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK
                     KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD
                     NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG"
     gene            5114..8707
                     /gene="evgS"
                     /locus_tag="JQ356_000813"
     CDS             5114..8707
                     /gene="evgS"
                     /locus_tag="JQ356_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HAY4620986.1"
                     /translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
                     SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALEEGEVDIVLSHLVASPPLNDDIAATKPLIITFPALVTTLHDSMRPLT
                     SSKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVVLNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLNPGGWDIIPGAIYSEDRENNVSFAEAFITTPYVF
                     VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELD
                     ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP
                     SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV
                     IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENS
                     DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDHAVYI
                     CGWQDITETRDLIHALEVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGS
                     GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHS
                     FGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLV
                     HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM
                     QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEHPITLPEKLSILIADDHPTNRL
                     LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS
                     LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI
                     EALKNNTANDLQLMQEILITFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL
                     NLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND"
     gene            complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="JQ356_000814"
     CDS             complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="JQ356_000814"
                     /EC_number="2.8.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA:oxalate CoA-transferase"
                     /protein_id="HAY4620987.1"
                     /translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPP
                     GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDYDKSIFINMLKQADVLAENFR
                     PGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
                     DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
                     YIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPR
                     FSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQA
                     RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS"
     gene            complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="JQ356_000815"
     CDS             complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="JQ356_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter YfdV"
                     /protein_id="HAY4620988.1"
                     /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
                     LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
                     IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
                     NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
                     LAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
                     IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
     gene            complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="JQ356_000816"
     CDS             complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="JQ356_000816"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HAY4620989.1"
                     /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
                     GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI
                     SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
                     GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
                     GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML
                     VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIGDIASSMQGMLAELK
                     QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSSVRDVLRENQDIYLV
                     NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
                     GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
                     FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
     gene            complement(12744..13994)
                     /gene="frc"
                     /locus_tag="JQ356_000817"
     CDS             complement(12744..13994)
                     /gene="frc"
                     /locus_tag="JQ356_000817"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HAY4620990.1"
                     /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
                     TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
                     DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
                     LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
                     DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
                     WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
                     CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
                     TAAVLQELGYSDDEIAAMKQNHAI"
     gene            complement(14507..15139)
                     /locus_tag="JQ356_000818"
     CDS             complement(14507..15139)
                     /locus_tag="JQ356_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HAY4620991.1"
                     /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA
                     AERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKT
                     NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
                     NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
     gene            15435..15710
                     /locus_tag="JQ356_000819"
     CDS             15435..15710
                     /locus_tag="JQ356_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4620992.1"
                     /translation="MKVNLILFSLFLLVYIMACNVFAFSISGGVSERSYKETEKTSAM
                     TTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYPTKANYLIHPVR"
     gene            complement(15787..16029)
                     /locus_tag="JQ356_000820"
     CDS             complement(15787..16029)
                     /locus_tag="JQ356_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HAY4620993.1"
                     /translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
                     FTMWLTGGNELVTEIFMFLAPACGLMIRFMVGYGRR"
     gene            16382..17302
                     /gene="lpxP"
                     /locus_tag="JQ356_000821"
     CDS             16382..17302
                     /gene="lpxP"
                     /locus_tag="JQ356_000821"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311285.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HAY4620994.1"
                     /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI
                     GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS
                     RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKII
                     EKEIMRAPEQYLWIHCRFKTRPVGESSLYI"
     gene            17658..17729
                     /gene="ypdK"
                     /locus_tag="JQ356_000822"
     CDS             17658..17729
                     /gene="ypdK"
                     /locus_tag="JQ356_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HAY4620995.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
     gene            complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="JQ356_000823"
     CDS             complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="JQ356_000823"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HAY4620996.1"
                     /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRQDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
                     VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
                     TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWIVEMPKASMYVWAKI
                     PEPYAAMGSLVFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA
                     MFRADGLLPASSKHIHENAE"
     gene            19409..21105
                     /locus_tag="JQ356_000824"
                     /pseudo
     CDS             19409..21105
                     /locus_tag="JQ356_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311287.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
     gene            21120..21854
                     /locus_tag="JQ356_000825"
     CDS             21120..21854
                     /locus_tag="JQ356_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY4620997.1"
                     /translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH
                     NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP
                     YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA
                     HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI
                     LRLKDLDFEVPVSRSKVKEFRQLMHL"
     gene            21867..22724
                     /locus_tag="JQ356_000826"
     CDS             21867..22724
                     /locus_tag="JQ356_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY4620998.1"
                     /translation="MKAPGLPADQQFFADLFSGLVLNSQLLGRVWFASQPASLPVGSL
                     CIDFPRLDIVLRGEYGNLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPT
                     WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL
                     LHLCRNVVNMPPGNSQPRGDFLYHSICNWVQDNYTQPLTRESVAQFFNITPNHLSKLF
                     AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP
                     GEYSARFQG"
     gene            complement(22727..25222)
                     /gene="ptsP"
                     /locus_tag="JQ356_000827"
     CDS             complement(22727..25222)
                     /gene="ptsP"
                     /locus_tag="JQ356_000827"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY4620999.1"
                     /translation="MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKA
                     DAKSSLALIGTGTLFNDSCSLNISGSDEEQAQRVLEEYIQVRFIDSDSIQPTQAELTA
                     HPLPRSLSRLNPDLLYGNVLASSVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLA
                     TLAEQLNQQLRESDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQ
                     VCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQ
                     FLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCG
                     VLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPG
                     AFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKS
                     IPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQI
                     LWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT
                     QYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLL
                     LGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEED
                     VRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVG
                     FGVAIPHTKSQWIRHSSISIARLAKPIDWQSEMGEVELVIMLTLGANEGMNHVKVFSQ
                     LARKLVNKNFRQSLFAAQDAQSILTLLETELTF"
     gene            complement(25247..26284)
                     /gene="ypdE"
                     /locus_tag="JQ356_000828"
     CDS             complement(25247..26284)
                     /gene="ypdE"
                     /locus_tag="JQ356_000828"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY4621000.1"
                     /translation="MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGS
                     VLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR
                     EECKIPGLLDGDRQGNDVSAMRVDIGTRSYDEVMQAGIRPGDRVTFDTTFQVLPHQRV
                     MGKAFDDRLGCYLLVTLLRELHSAELPAEVWLVASSSEEVGVRGGQTATRAVSPDVAI
                     VLDTACWAKNFDYGAANHRQICNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQAD
                     MFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIKRLT
                     RETVVQLTDFR"
     gene            complement(26284..27369)
                     /gene="ypdF"
                     /locus_tag="JQ356_000829"
     CDS             complement(26284..27369)
                     /gene="ypdF"
                     /locus_tag="JQ356_000829"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY4621001.1"
                     /translation="MTLLASLRDWLKEQQLDAVLLSSRQNKQPHLGISTGSGYVVISR
                     ESAHILVDSSYFVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSW
                     ETAHRWKSELNAKLVSATPDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSE
                     REIAAELEWFMRQQGAEKASFDTIVASGWRGVLPHGKASDKIVAAGEFVTLDFGALYQ
                     GYCSDMTRTLLVNGEGVSAESHPLFDVYQIVLQAQLAAISAIRPGVRCQQIDDAARRV
                     ITEAGFGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRI
                     EDVVLVTPQGAEVLYAMPKTVLLTGEA"
     gene            complement(27384..28631)
                     /locus_tag="JQ356_000830"
     CDS             complement(27384..28631)
                     /locus_tag="JQ356_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HAY4621002.1"
                     /translation="MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGIS
                     RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF
                     GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV
                     PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
                     FGGWINGVIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
                     VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
                     LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI
                     TALMVVFLRLMMFRKGKLLIDSL"
     gene            complement(28653..28979)
                     /locus_tag="JQ356_000831"
     CDS             complement(28653..28979)
                     /locus_tag="JQ356_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-like phosphotransferase enzyme IIB
                     component 1"
                     /protein_id="HAY4621003.1"
                     /translation="MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD
                     GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM
                     IASEQQ"
     gene            complement(29198..30163)
                     /gene="glk"
                     /locus_tag="JQ356_000832"
     CDS             complement(29198..30163)
                     /gene="glk"
                     /locus_tag="JQ356_000832"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HAY4621004.1"
                     /translation="MIKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
                     IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
                     AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH
                     VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI
                     TERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASG
                     FRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
     gene            30367..31623
                     /locus_tag="JQ356_000833"
     CDS             30367..31623
                     /locus_tag="JQ356_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel protein"
                     /protein_id="HAY4621005.1"
                     /translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQR
                     LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPG
                     LIVALILGLAGGVSLGPEHPIMTINIALAVAIGARLLPRVNRMEWTILASAGTIGALF
                     GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM
                     EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGG
                     PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA
                     LGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML
                     PAWLLLAGKPMMMVNRPKQQPPHDNV"
     gene            31738..32064
                     /locus_tag="JQ356_000834"
     CDS             31738..32064
                     /locus_tag="JQ356_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY4621006.1"
                     /translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW
                     DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERSYREGWRDRDDHRGKGR
                     GHGHRH"
     gene            complement(32205..33443)
                     /gene="mntH"
                     /locus_tag="JQ356_000835"
     CDS             complement(32205..33443)
                     /gene="mntH"
                     /locus_tag="JQ356_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mn(2+) uptake NRAMP transporter MntH"
                     /protein_id="HAY4621007.1"
                     /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA
                     GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
                     IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKTLEKVIGGL
                     LLFVAAAYIVELIFSQPNLAQLGKGMVLPSLPTSEAVFLAAGVLGATIMPHVIYLHSS
                     LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAY
                     LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP
                     SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV
                     IVVLVVALNIWLLVGTALGL"
     gene            33779..34981
                     /gene="nupC"
                     /locus_tag="JQ356_000836"
     CDS             33779..34981
                     /gene="nupC"
                     /locus_tag="JQ356_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HAY4621008.1"
                     /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
BASE COUNT         9232 a         8695 c         8082 g         9003 t
ORIGIN      
        1 gtcacggcga actgcctttc aaggttgaag tggcacgacc tcattggctg aaggtttacc
       61 ttatgttggc ctgaccgaac aggatgttca ggacgcccat gcgcgcttat cccgttttgc
      121 accctatctg gcaaaagcat ttgctgaaac tgctgccact ggggggatta ttgaatcaga
      181 actggttgcc attccagcta tgcaaaaacg gctggaaaaa gaatatcagc aaccgatcag
      241 cgggcaactg ttactgaaaa aagatagcca tttgcccatt tccagctcca taaaagcacg
      301 cggcgggatt tatgaagtcc tggcacacgc agaaaaactg gctctggaag cggggttgct
      361 gacgcttgat gatgactaca gcaaactgct ttctccggag tttaaacagt tctttagcca
      421 atacagcatt gctgtgggct caaccggaaa tctggggtta tcaatcggca ttatgagcgc
      481 ccgcattggc tttaaggtga cagttcatat gtctgctgat gcccgggcat ggaaaaaagc
      541 gaaactgcgc agccatggcg ttacggtcgt ggaatatgag caagattatg gtgttgccgt
      601 cgaggaagga cgtaaagcag cgcagtctga cccgaactgt ttctttattg atgacgaaaa
      661 ttcccgcacg ttgttccttg ggtattccgt cgctggccag cgtcttaaag cgcaatttgc
      721 ccagcaaggc cgtatcgtcg atgctgataa ccctctgttt gtctatctgc cgtgtggtgt
      781 tggcggtggt cctggtggcg tcgcattcgg gcttaaactg gcgtttggcg atcatgttca
      841 ctgctttttt gccgaaccaa cgcactcccc ttgtatgttg ttaggcgtcc atacaggatt
      901 acacgatcag atttctgttc aggatattgg tatcgacaac cttaccgcag cggatggcct
      961 tgcagttggt cgcgcatcag gctttgtcgg gcgggcaatg gtgcgtctgc tggatggctt
     1021 ctataccctt agcgatcaaa ccatgtatga catgcttggc tggctggcgc aggaagaagg
     1081 tattcgtctt gaaccttcgg cactggcggg tatggccgga cctcagcgcg tgtgtgcatc
     1141 agtaagttac caacagatgc acggtttcag cgcagaacaa ctgcgtaata ccactcatct
     1201 ggtgtgggcg acgggaggtg gaatggtgcc ggaagaagag atgaatcaat atctggcaaa
     1261 aggccgttaa taacgtttca acgcagcatc gcaatccttt ccctgggtga gcgatgctgc
     1321 cgatggcgca gacttaagat ccccggtctt acccgctata accccctcct tttatcatca
     1381 cccaacgcct ttcgctgtaa acggcggttt cgcaaaccaa accaaaaccg taagtaagat
     1441 aaaagcaata gccgccatac ggaaaatctc atttgcagaa atagaaagtg actgctgggt
     1501 tatttcatta ttaatttcat taagaactcc tgaaagcgaa ccataatatt tatccataat
     1561 ttgtgacgat gaattaaaca cggggttaaa ttgatcgatg gttgctgtca actgactatg
     1621 gtgtaacgat tcgcgtcgtc cccacagcgt cattgtcaac gacgtaccaa ctgatcctga
     1681 caaggtacga aaaaaattac tcatactcga ggcattggca aatttattat ctggcaagcc
     1741 tgaaaacgaa atcgttgtta agggtaaaaa gaaacaggca acggcgaatc cctgaaaaaa
     1801 ctgcggcaaa atgatgcctg taaaatcaat cgttggcata aatgtcacag aacgccagta
     1861 atagcaaacc gcatacatca aaaaactaaa tgtcactaac aaccgcatgt ctattttgtt
     1921 gccataacgt cctatcaaag gtgaaattaa tagtggcatg atgccgatgg gcgcataagc
     1981 aagtccggcc catatcgcat tataccccat cgtttcctgg agtaactgcg gcataaggac
     2041 gatcgctcca gagtaaaata aatacgcgca tgtgatactc acaataccaa tggtgaagtt
     2101 acgggactta aacaaactga gatcaagaat cgggttctct gaggtcgact cccaaatgac
     2161 taaagagatc agagaaataa ctgatactac tgttaatatt attattgtac tcgagttgaa
     2221 ccaatccaga tcgcgccctt tatcaagcat aatttgcaag ccaccaacac cgagcactaa
     2281 cagggtcagt cctggtagat tcattttgac cggtgaagtc tcagtttctc ttcctttaag
     2341 taaggttaag cataatgtca ggacgataat ccccataggg acattgatta aaaatatcca
     2401 accccagcta aagttatcac aaatataacc gcccaatatc ggcccacata tcggagcgat
     2461 aatcacggtc attgaccata atgccagagc aaatgttctt ttttctggcg gataattcct
     2521 taataataaa ctctgtgaca gtggaattaa cggccccgcc attaacccct gaacgactct
     2581 aaaaaatatc agcacatcaa gattggtcga taggctacac attaatgaag acagcgaaaa
     2641 aaaggttact gaaagtaaaa ataatcttaa ttcgcctatt ctttgtgcca acctgccagt
     2701 aacagggatc gcaatggcat ttgctacacc aaacgaggtg ataacccagg tgccttcgtc
     2761 tgttgatgct cccagaaagc cagatattgt cggtattgcg acgttagaaa tagtggaatc
     2821 caacatttgc ataaatgtcg ctaatgacaa tgcaatagtg acgcaccata acgtcccacc
     2881 ggttaatggt gccggagtcg atttagtgat tgccattaaa gttgtccatt atgcgaaata
     2941 atgttgctaa tttctttttc tatcggactg gtatcgataa ctaaagcctt actggtataa
     3001 gccggcatgg aggtcacggt tgaagccagc tcaggcatct cggcaatgtc ttcgttcttc
     3061 gtatcaatag ttgctgtcat cgataaacca atacgcaagg gatgttccat gagttctttt
     3121 ggatcaagag aaacttcaac cggtacacgc tgaacgattt tgatccagtt ccctgtcgca
     3181 ttttgtgcag gtaataagga gaacgcattg ccggttccca tattgatccc tgtcacccga
     3241 ccatgaaaca caacattttc accataaaga tcgctgataa tattgaccga ttgaccaatc
     3301 cgcacatccg tgagttgtgt ttctttaaag ttggcattaa cccacatttg acgtgccggt
     3361 acgacagcca ttaacgattg tccggggctc actgtttcgc cgacctgaac acttctctgg
     3421 gcaatatagc cggtaaccgg actcttaata tccgtacgtt taagcgccaa ccaggcttct
     3481 ttagttgcat ccgccgcttc aacgacttgt ggctgacggt ttaatggtgt gttcattact
     3541 aaagctttat tcgctttata agcctggata gcggcattca atgccgcttt gctacttatt
     3601 aacgtatctt tggtatgctc cagcgtttct tttgaaataa ccccctgctt cgctaacggc
     3661 actcgacggt tataatcttc taaagattgt tgatactgaa tacgtgctga agcgacttcg
     3721 gcactgtatt gtttatcctg taagtatagt ttattcgttt gccgaacaat atttgccaga
     3781 ttatttttag ctttattgag tgcgatagtg gcatcagttt tatccagtga aactaaaatg
     3841 tcaccttgtc gaacgtagtt cgtatcttta tgattaacga cagtgacact acctgagact
     3901 tgtgcagaaa ttggatctgc attccccgtg acataggcgt catctgtact aatcatgtct
     3961 tctaattcca ttgaccaata gacataggca cctgaaaacg caataaataa aactaccgcc
     4021 aataaagaaa agtattttct tctgttagaa tgttttttat ttgaattaat ctgttccact
     4081 attatctctc atttctcata gatgaaattt atgaattgaa tgaaaagagc attcattctt
     4141 catatcaaac acagtgcatg tgttgcacat tatcccagga acgttggagg cctaatttaa
     4201 atgaggtgca aaaaaaacaa cagaggacta aaccgtggct tttgcaatac aattcttacg
     4261 cctgtaggat tagtaagaag acttatagtg ctaacttgaa actataaatc atcggtacaa
     4321 cccctgattt tattgttgac atttcattta tgccgactat ttatatggta tacttgtcga
     4381 attatcttaa aggaagctca gattttctta tttttattga gaaaatgaga tgacgcctta
     4441 tgtctgtatt actacaggga gaagggagat gcttcattgc aaagggaata atctatgaac
     4501 gcaataatta ttgatgacca tcctcttgct atcgcagcaa ttcgtaattt attgatcaaa
     4561 aacgatattg aaatcttagc ggagttgact gaaggggcaa gcgccgttca gcgggtggaa
     4621 acacttaagc ctgatatcgt catcattgat gtcgatatcc ccggagttaa cggtatccag
     4681 gtgttagaaa cgctgaggaa gcgccaatat agcggaatta ttattattgt ctccgctaaa
     4741 aatgaccatt tttacgggaa acattgtgct gatgctggcg ctaatggatt cgtgagtaaa
     4801 aaagaaggca tgaacaatat cattgcggct attgaagctg caaaaaatgg ctactgctat
     4861 ttccccttct ctctcaaccg gtttgttgga agtttaacgt ccgaccagca aaaactcgac
     4921 tccttatcga aacaagaaat tagtgtcatg cggtatattc ttgatggcaa ggataataat
     4981 gacattgctg aaaaaatgtt catcagcaac aaaactgtca gcacttataa aagtcgcctg
     5041 atggaaaaat tagaatgtaa atcactgatg gatctttaca cattcgcgca acgtaacaaa
     5101 atcggctaat cacatgaagt ttttacccta tttttttctt ctctgttgtg gtctttggtc
     5161 gaccataagt ttcgcagacg aagattacat cgaatatcgt ggcatcagta gtaacaaccg
     5221 tgtcacactt gatccagtac gtctgagcaa caaggaatta cgttggttag cgagcaaaaa
     5281 aaatcttgtg attgcagtac acaagtccca aacggctacc ttgttgcata ccgattcgca
     5341 gcaacgggtt cgtggtatta atgctgatta tttaaatctt ttaaaaagag cgttaaatat
     5401 caaattaaca ctccgggaat acgccgatca tcaaaaagca atggacgcgc tggaagaagg
     5461 tgaagtcgat atagtgttat cacatttagt tgcttcgccg cctcttaatg atgacattgc
     5521 tgcaaccaaa ccactgataa ttacctttcc ggcgctcgtc accacccttc acgattcaat
     5581 gcgaccgctt acctcatcaa aaccagtaaa tattgctcga gtagcaaatt atccccctga
     5641 cgaggtaatt catcaatcat ttccaaaagc aacaattatc tcttttacaa atttatatca
     5701 ggcattagca tccgtctcag ccggacagaa tgattacttt attggtagta acatcattac
     5761 cagcagtatg atttcccgct atttcactca ctccttaaat gtagtgaaat attataactc
     5821 accgcgtcaa tataattttt tcttgaccag aaaagaatct gtcgttctta atgaagtact
     5881 caatcgattt gttgatgctt taacaaatga agttcgctat gaagtttcac aaaattggct
     5941 tgatacagga aacctggcct ttctgaacaa accattagaa ctcactgaac atgaaaaaca
     6001 gtggattaag caacatcccg atttaaaggt gctggaaaat ccttactctc ctccctattc
     6061 tatgacggat gaaaatggct cggttcgggg cgttatgggg gatattctta atattattac
     6121 cttgcaaaca ggtttaaatt tttctccgat caccgtttca cacaatatcc atgccggaac
     6181 acagcttaac cccggtggat gggatataat acctggcgct atttatagtg aagatcgaga
     6241 aaataatgtt tcatttgcag aagctttcat aacaacgcca tacgtttttg tcatgcaaaa
     6301 agcacctgac agtgaacaaa cattaaaaaa aggaatgaaa gttgccattc catattatta
     6361 tgagctgcat tcgcaattaa aagagatgta tccggaggtt gagtggataa aagtcgataa
     6421 cgccagcgct gcatttcaca aggtcaagga aggtgaactt gatgctctgg tcgcgacaca
     6481 gctaaattcg cgttacatga tcgatcatta ctatcctaat gaactgtatc attttcttat
     6541 tcccggcgtt ccgaatgcat cgctttcgtt cgcttttcct cgcggagaac cggaacttaa
     6601 ggatattatt aataaagcac tgaatgcaat tcccccaagc gaagttctgc gcctgacgga
     6661 aaaatggatt aaaatgccca atgtgaccat tgacacatgg gacctctata gcgagcaatt
     6721 ttatattgtt acgacattat ccgttttatt agttggcagt agccttttat ggggattcta
     6781 cctgttacgc tcagttcgtc gtcgtaaagt cattcagggt gatttagaaa accaaatatc
     6841 attccgaaaa gcactctcgg attccttacc aaatccaact tatgttgtaa actggcaagg
     6901 taatgtcatt agtcataata gtgcttttga acattatttc actgcggatt actacaaaaa
     6961 tgcaatgtta ccattagaaa acagtgactc accctttaaa gatgtttttt ctaatgcgca
     7021 tgaagtcaca gcagaaacga aagaaaatcg aacaatatac acacaggtat ttgaaattga
     7081 taatggcatc gagaaaagat gcattaatca ctggcataca ttatgcaatc tgccagccag
     7141 cgatcatgct gtttatattt gtggttggca agatattacc gagacgcgtg atttaattca
     7201 tgcactcgaa gtagagagaa ataaagcgat caatgcaact gtcgcaaaaa gtcagtttct
     7261 ggcaacaatg agtcacgaaa taagaacacc aataagctcc attatgggct tcctggaact
     7321 tctgtcgggt tctggtctta gcaaggagca acgggtggag gcgatttcac ttgcctacgc
     7381 caccggacaa tcactcctcg gcttaattgg tgaaatcctt gatgtcgaca aaattgaatc
     7441 gggtaactat caacttcaac cacaatgggt cgatatccct actttagtcc agaacacttg
     7501 tcactctttc ggtgcgattg ctgcaagcaa atcgatcgca ttaagttgca gcagtacatt
     7561 tcctgatcat tacctggtta agatcgaccc tcaggcgttt aagcaggtct tatcaaattt
     7621 actgagcaat gctctcaaat ttaccaccga gggggcagta aaaattacga cctccctggt
     7681 tcacattgat gacaaccacg ctgttatcaa aatgacgatt atggattctg gaagtggatt
     7741 atcgcaggaa gaacaacaac aactctttaa acgctacagc caaacaagtg caggtcgcca
     7801 gcaaacagga tctggcttag gcttaatgat ctgcaaagaa ttaattaaaa atatgcaggg
     7861 cgatttgtca ttagaaagtc atccaggcat aggaacaaca tttacgatca caatcccggt
     7921 agaaattagc cagcaagtgg cgactgtcga ggcaaaagca gaacacccca tcacactacc
     7981 tgaaaagttg agcatattaa tcgcggatga tcatccgacc aacaggctat tactcaaacg
     8041 ccagctaaat ctattaggat atgatgttga tgaagccact gatggtgtgc aagcgctaca
     8101 caaagtcagt atgcaacatt atgatctgct tattactgac gttaatatgc cgaatatgga
     8161 tggttttgag ttgactcgca aactccgtga gcaaaattct tccttaccca tctgggggct
     8221 tacagccaac gcacaggcta acgaacgtga aaaagggtta agttgcggca tgaacttatg
     8281 tttgttcaaa ccgttgaccc tggatgtact gaaaacacat ttaagtcagt tacaccaggt
     8341 tgcgcatatt gcacctcagt atcgccacct tgatatcgaa gccctgaaaa ataatacggc
     8401 gaacgatcta caactgatgc aggagattct catcactttc cagcatgaaa cgcataaaga
     8461 tctacccgct gcgtttcaag cactagaagc tggcgataac agaactttcc atcagtgtat
     8521 tcatcgcatc cacggtgcgg ctaacatcct gaatttgcaa aagttgatta atattagcca
     8581 tcagttagaa ataacacctg tttcagatga cagtaagcct gaaattcttc agttgctgaa
     8641 ctctgtaaaa gaacacattg cagagctgga ccaggagatt gctgttttct gtcagaaaaa
     8701 tgactaaata gcggctccca caatgttcaa atgtgggagc tatttaccag cacatcttac
     8761 atttatgatg agaactcctg gcgaatttgt tccccatgct ggtcgagcgt tgccgctccc
     8821 ggcataacat gcgggtccgc gcagccgctg atttttatcg gattacccgg catcattatt
     8881 cccccggctt caatcaacat atttctcgcc tgagtttgtg gcaatttaat ggcctcagcc
     8941 acacttaata acggcgcgac gggtacacca acttcatgta ttctggctaa ccaaacttca
     9001 gctgcctgcg tttttaacgt ccgctcaata tattgtttaa gaatagcctg gttttgtacg
     9061 cgtaaaatat tgctgctaaa tcggggatca ttaaccagtt ccgtaagctc cagtgcctgg
     9121 cataacgcag aaaaaagctt gtcattacca caacaaatcg taatcggctt atcctgagta
     9181 ttgaaaacat caaaaggtgc catgtaggga tggcgatttc ccagacgttg tggtgacttc
     9241 cctgtcgcga tatatgccat cagaccatgc tccagaaaac tcagcgtggc atcaaacatc
     9301 gctatatcga catgcgcccc tctctggctc ttttcgcggc cataaagtgc actcactatt
     9361 ccgctgaata aatagacacc gccgcataga tccgcaagag atgtaccaac gcgcactggc
     9421 ggagcatcag gatatcctgt ttccatcatt atcccgctca ttgcctgaat gatggtatcg
     9481 taggcaggag catcttttag cggaccggta tgtccgaaac ctgacgatga agcatatatg
     9541 aggcgcgggt tgatttcttg aagcgtttcc catgaaaacc ccagtttttc cattgtacct
     9601 gggcgaaaat tctcagctaa tacatcagct tgtttgagca tatttataaa tatactttta
     9661 tcgtaatcat tctttaaatc aagaaccaca ctctctttgc catgattaat aaaactgtaa
     9721 tagagtgact gtccatccac atagggacca aatgtgcggg tatcatcacc atgacccggc
     9781 ggctcaactt taattaccct tgcgcccata ttacaaagaa gttgagttcc gaaaggtcca
     9841 ttaaggacat gtgtcatatc gataactaat aagccttcaa acggcccttt gctttcatta
     9901 tttgtcattt gcttatgcct tgaaaaaagc cgaaggtgaa aagacacttc ggcatttatg
     9961 taaaatcaat aacatgatta attatgaaac cagtcgactg acataaatcc acaagggagc
    10021 cgtgacgaca aagcccagta cgctcacagc caatgacgct gtaccagtac gggtgtagac
    10081 attaaaccgg ctggcaataa taattccgga gaatgccggc ggtaatgcgc ctgccagtac
    10141 catcatctgc agatgttcgc tgttcaaatg acatgccata ccaacgagaa gcagtgccag
    10201 tggcatcaga atcagcttca ggaaggtgtt ataagcaatt tcggcactga actcgaattt
    10261 atgtgcagcc agagtcaacc ccgcagcgaa taccgctacc cctgagttag ccttcgcaat
    10321 cagattaaag gttgggtccc atgctgccgg aatttttacc ccaaccaaca ccaggatcgt
    10381 tgccagaaca ggtgcccata ctactggctc ctttgccgca gaaattaatg cactcagatt
    10441 actattcttc ttaccatccg ctcctgaaga aggattcagc aaatacagac caataggaat
    10501 agtaattgcg ttaacaataa tagaaataat tgctaccact aaacctgttg atacggaatc
    10561 accataaata ggatcgagaa ctgcaaaccc caggaatcca atggtaggtg aacctgcaat
    10621 taatgcacat acagctgctt ctgcatgggt acgtttaaaa aatttgtagc aaccgaacca
    10681 ggagaaaaag aaacatccga caataaccac aagtgataca agggtcagac gagtgtccgc
    10741 aaaaatcatt tccctgtttg cccgagtaat agatacaaat agagccgcag gaagcgcgta
    10801 gtttaatacc agtttattaa atgcgcgggc ttgatcttct gaaaaagttt ctcgtctgcc
    10861 gctaaaataa cccaacagca tgattacgat aataggcaat aaatcgccaa taaaaaatgt
    10921 tagcataata gtatttccga taagggtccc ctcaccatcg cataatgagt tggcaagagg
    10981 agacgatgtc agtatttaat taccagcgac ttgttttggg ttaagtttgg taatatggcc
    11041 actttcagtt cctgctgcag ggtcgatgac cacattaata atggtcggtt tgcgcgactg
    11101 aataccggtg gttaaagcat gacgaagttc atctgtcgtg gtgacgttat agccaacgcc
    11161 acgaaacgca tccattaatt tgtcatacct tgcatggtgc aacagatccg ttggagatgg
    11221 tgcaccagcg ccactgagat caacaccgtc tcctctgtag atgccgccat tattaaaaat
    11281 aacgatcgtc accggcaggt tatatcgaca aatcgtttca atttccatcc cactgaaacc
    11341 aaaagcacta tcaccttcaa tggcgacaac cggagaacca gaagtcacgc tagcaccgat
    11401 ggcatagccc ataccgatgc ccatgacacc ccaggtacca caatccagac gacgacgtgg
    11461 tttatacata tcaataatat ttcgtgcatt atccagggta tttgcacctt cattaactaa
    11521 ataaatatcc tggttctcgc gcaatacgtc gcgcacagaa cttaatgcat taaagtaatt
    11581 taatggttga gtatctgtac ttaatttttc atgcattttt tgtgcatttt gctgcttgtg
    11641 gatatttaaa atatcgcgcc ataccagtgg agtcgtaaat gtgttttgtt tcagttctgc
    11701 cagcatacct tgcatactgg atgcaatatc accaatgact ggcacagcaa tggggcggtt
    11761 gctgtcaatt tcctgcggtt caatatccag ttgaataaac tgtgtatctg ccgcccatcc
    11821 ttttttaccg tgtgccaata accaattcag tcgtgcacca acaagcatga caacgtcagc
    11881 atttgccagg gcaaacgaac gcgcagctgc cgcagaaagt ggatgcgtat cttcaaggat
    11941 ccctttcgcc atagacattg gcaggaatgg aatctgagca ctttcaataa attcacgaag
    12001 ctgttcatca gcttgtgaat acgccgcgcc tttgccaagg ataattaatg gccgttcagc
    12061 ttttgctaaa agcgaaattg cgctagtgac tgacttcggg catggcaata atgctggcga
    12121 cggattttca actttaacaa tcgtggttaa cgcttcgtct ttttccatcg tcgcggccag
    12181 gacatttgct ggcaaatcaa gataaactcc gccagggcga cccgatacag agacccggat
    12241 agcgcgtgcc aatgcaatgc caagatcctg cggctgatta acgcgaaatg ctgctttggc
    12301 atacggtttt gccgcattca tttggtccag ctcttcataa tcaccttgct gtaggtcgac
    12361 gatcgcgcgg tcgctggagc cgctaatcat gatcatcgga aaaccattta ccgttgcgtt
    12421 ggccaatgcc gtcaaaccat tgaggaatcc tggcgcagaa actgtcaggc agatccccgg
    12481 tttttgggta agaaaaccgc ttgccgcagc ggcatagcct gccgactgct catgacgaaa
    12541 accaatataa cgaatgcctt ccgcctgggc atggcgtgcc atatccgtca caggaatacc
    12601 tacaacacca taaatagtgt caatattatt ctgttttaat gcttcaacga tgatatgcat
    12661 accatctgtc atttgaagtt gatctgacat gattaataac ctcgaaattt ttataaattg
    12721 ggagccagaa gcccccgtta atatcagatg gcgtggtttt gcttcattgc agcaatttca
    12781 tcgtcgctat aacctagctc ctgcaataca gcagcggtat gttcacctaa tagcggcgca
    12841 gctttaatat ccggcgtaaa agcagagaat ttcattggac aaccaacggt cagatatttt
    12901 ccacgcaacg gttgttccac ttcaacaaca ctgccacttt ggcgcaaaga gggatcaagt
    12961 gaaatttctt tcatacttaa aaccggtgca caaggaatat caaactgagt caaataggcc
    13021 accgcttcat gtttatcaat agtgacagtg tatttttcga tttcagcaaa aatatcgaaa
    13081 atatgtggct gtcgggcatg ggctgtactg tatgccggat cggtaatcca ttctggtttg
    13141 ccgatggctt tacaggtgtt ttcccagttt tgctcctgaa tagtgaaata aatataggcg
    13201 ttcggatcgg tttcccagcc tttacatttc aggatccagc caggctgacc gccaccacct
    13261 gcattaccac cgcggggaac tgcatcacca aatgtaccat tcggatactg cgggtattct
    13321 tccagataac ccaatttatc gagacgctgc tggtcacgta atttcacgcg gcaaaggttc
    13381 aatacggcat cctgcattga catggtgact cgttgcccac gccccgtttt ttcgcgatgc
    13441 agcaaagcag caagcaaacc gatcagcaaa tgcattccgg tgttgctgtc acccaacgct
    13501 gcagcgctta ccagcggcgg accatcccaa aaacccgtag tggatgccgc gccacccgct
    13561 gcctgagcaa cgttttcata ggcttttaca ttcacataag gcgaacactc atcaaaccct
    13621 ttgatcgaac caaaaatcag acgtggattg atttcttgaa tatgctccca ggtgaagccc
    13681 atgtgatcaa tggcccctgg atgaaagttc tcgactaaga tatcagcttc gcggatcagc
    13741 ttttccatta cctctttgcc ttccgctgtt ttggtattta actcaataga acgtttgtta
    13801 ctgttaagca tggtgaagta aagcgcatcg atatcaggaa tatctcgcag ctggtgacgc
    13861 gttacgtcac caacgccggg acgttcaatt ttaataacgt cagcgccaaa ccaggccagc
    13921 atttgagtac aagatgggcc agattgcaca ccggtgaaat cgagaacttt aattccttga
    13981 agtggagttg acatagcaat acctattagt taattaaata tgtgttaatt tagcgtttat
    14041 ttaaggcgta atatcttcta taaataaccc gcaaaatatc gtcgtagctg cactcgatat
    14101 ttttaaaatc ctgtatcaag tgctgaaaat catttcatcg ccacttccaa ttcctttctg
    14161 catggtaagt agtgaggacg aaaagaagaa tatgataaat attgattcgt ggtaatcaga
    14221 gagagtcgcg acatttgtga tgttattctt acaactgtaa gaagcgccgg tgatttacaa
    14281 gtaagggtat gattacgctt tttaaagcgt accataaaac ataacataat aaatgatttg
    14341 tgatgacacg ggattattgg ggtttacttt gaggaagata aaatgcgtgt ttatagaacc
    14401 gcgagcgcca aataatttta tgaccacaac ctgtcgtatt gtggtcataa aaaattgtcg
    14461 gctggaggga gttaaatcct ttacctcaat atactgcctg tcagcattag ttcacaaaca
    14521 gtgcttcgct gtcgacgatg attccatctt ccgcaccttt cagcgccagg tttgcctcgt
    14581 agtattgctt tttatcaagc agtttctgcg catcagcaag tgcattacga gtctgtttaa
    14641 gcggcatcag atattggttt tccattacgc caacaccggc caggcgaagt tcttccattg
    14701 cgcccttttt atcccctttc gccatttttt cattggcaat ttttatcgcg gcttcttttt
    14761 cgggagttgc tacataactc tcagaaattc cgacagatgc attaatgaca atatattggt
    14821 catcattgag attggtcttt ttacctggct tagcgaactt tgcccattcg gtactgtcat
    14881 ctgacagcaa agcggaagct tcattggtca gttcttttgc cttttctgga tcgccatgaa
    14941 acagagccag gcgcgctacc tgcacgtcac gcatcgcata taaaccttgt tcagagatac
    15001 gctctgctgc tgccgttttc tgggtttgct gaacttgctg agtttgctgt tgtgccgcta
    15061 ccggtgcatt atcagcagcc catacagttg aagatgccag aattgctgtg accatcgtag
    15121 ccataattaa acgtttcata cttacctcat tctttaacag ttttagaaaa cgccgccatc
    15181 atattgggtg agcatgaaat gagaaatcag agagcaacgg tcattttgaa agggttatct
    15241 tacagttgta gttattatcg caagaagtat tttagtctta caattgtagg aatctgcttc
    15301 ctgtcgcaga gaactattct tatgtaccac aaagagatgt catttattat atcgatgtaa
    15361 atattgatta attatatgta aatacagcca taacatcgta ggttctcagt gaaccatttt
    15421 caggataact ttctatgaaa gtaaacttaa tacttttcag cttattttta ttggtctata
    15481 ttatggcatg caatgttttt gcattttcca tttctggtgg tgtaagtgag aggagctata
    15541 aagagactga aaaaacatca gcgatgacga ccacacactc tacaaaactt cagccatcac
    15601 aggcgatttt gtttaagatg agagaagatg cgccaccatt aaacctcaca gaagaaatca
    15661 cgcctactta tccgacaaag gcgaattatc ttattcatcc tgtgcgatag cgtctgtcac
    15721 atggcaggtg aacaatcatg tctgatgctg atgtgaacac ctgcccaaat gagccatcct
    15781 gacccactat cgcctgccat accccaccat aaagcgaatc atcaagccac aagccggggc
    15841 aagaaacata aatatctccg tcactagttc attaccgcca gttaaccaca tggtgaagta
    15901 ataaatgagt gcagcgagga tcaccatgcc gaagaaagaa gagaccgccg ataccacgtt
    15961 cagtacctga ccgatgtagc cgcttacgca gacaatacac agggcgagaa acatccataa
    16021 ataaatcata gctcaacctc ctgccgcgct aaaaaacctg taacttcagt cactttaata
    16081 gtaagacaat ccttaacctc tggcaatttt tgctaagcat caatgaaaac agcatgttaa
    16141 atgcaagact gttgtgtacg gaaaaatatt tactttgcac gattaataat cagtagctga
    16201 aagcagtcag cgagtgataa agtacagata ccgcattcat gctcctcgtg gttatgtcct
    16261 gactagtctt tacacacttt acaggaacca ttgtcgtaca tgatggccca accaattgag
    16321 tgtaccgctg tcgacatgga atcttctgcg atacaacaat tcgtatctac agaaggtaac
    16381 tatgtttcca caatgcaaat tttcccgcga gtttctacat cctcgctact ggctcacatg
    16441 gtttgggctt ggtgtactct ggctttgggt acagcttcct tatcctgttc tctgctttct
    16501 cggcacgcgt attggcgcaa tggcgcgacc attcctgaaa cgtcgtgaat ctatcgcccg
    16561 taaaaacctg gaactttgtt tcccgcagca ttctgcggaa gaacgcgaga agatgattgc
    16621 cgaaaacttt cgttcactcg gcatggcgct ggtagaaacc ggcatggcat ggttctggcc
    16681 cgacagtcgc gtacgtaaat ggtttgatgt tgaagggttg gataacctta aacgcgcaca
    16741 aatgcaaaat cgcggcgtaa tggttgtcgg cgtccatttt atgtcgctgg aactgggcgg
    16801 ccgcgtgatg ggactgtgcc aaccaatgat ggctacctat cgtccacata ataatcagct
    16861 gatggaatgg gtgcagaccc gtgggcgcat gcgctctaac aaagcgatga tcggcagaaa
    16921 taatctgcgc ggcattgtcg gtgcactgaa gaaaggtgaa gcggtatggt ttgctcccga
    16981 tcaggattat ggtcgtaaag gcagctcctt cgcgccgttc tttgcggtgg aaaatgtcgc
    17041 cacaaccaat ggcacctatg ttctctcccg tctctctggc gcagccatgt tgaccgtaac
    17101 gatggtaaga aaagcggatt acagcggata tcgtttgttc atcaccccag agatggaagg
    17161 ctacccgaca gatgaaaatc aagccgctgc ctatatgaac aagattatcg agaaagagat
    17221 catgcgcgca ccggagcagt acctctggat ccactgtcgc tttaaaacgc gcccggtggg
    17281 agaatcgtcg ttgtacattt aacaaactgc tcttactctt tccctcctca aatcggccat
    17341 aataacctca tggtttttat ggcttttttc ttaaggtttt ttccttcgct gaatatctaa
    17401 ttattaccgt cagaaattaa actgtcgccg atatgagaca cttgtaagtt actaaaagta
    17461 aataagaaaa tgcctcttgt ctcgtttcag ttttaggcgt acattagcgc cgtctcgagc
    17521 agtttagctc agaattctgg ggtgatgccc acggtaaaat acagggcttt taaggtcgct
    17581 ttgcccagtg tcaactcact gtatcaggtg taatgaagtc attcaggcgt aacagcaatt
    17641 acgcggagag atgtaaagtg aaatatttct ttatgggcat ttcttttatg gtcatcgttt
    17701 gggccggtac ttttgccctg atgatctaaa agcaaactgt gcaatgaaaa acaggagcca
    17761 tcaggctcct gtttgcattt ctgacgacgg tgtttattcc gcgttttcgt gaatatgttt
    17821 gctgctggcg ggtagtaaac cgtcggcacg gaacatcgct ttaatccctc tgatggcctg
    17881 acgaatacgg tcgcggtttt caatcagtgc aaagcgaaca tgcgtatcac catagtcgcc
    17941 aaagccaatc cccggcgaga cacagacctt cgcttcgtta agcaatttct tggcaaatac
    18001 cagcgagccc atggcagcat acggttccgg tattttcgcc cagacataca tcgaagcctt
    18061 cggcatttca actatccagc ccgcttcatg cagcccttta accaatacat cacggcggcg
    18121 tttgtactgt tcggcaatgt cgcgcacgca ctgttgatcg ccctccagcg ccgcaatcgc
    18181 cgccacctgc aacggcgtaa aggtgccgta atcgtgatag cttttaatac gagccagggc
    18241 gctgaccagc gttttgttgc caaccataaa gccgatacgc cagcccgcca tgttgtagct
    18301 tttcgacagc gtaaagaact cgactgccac atcgcgtgca cccggtacct gcatgattga
    18361 cggcgctttc cagccatcgt agacgatatc ggcataggcc aggtcgtgga ccaccagcac
    18421 atcgtagcgt ttcgccagcg ccacaacctt ttcgaagaac tccagctcca cgcattgcgc
    18481 ggttggattc gacgggaagc cgaggatcat catcttcggt ttcggataac tttcacgaat
    18541 ggcgcgctcc agttcgttga agaaatcgac accttccacc agcggcactg agcgtacctg
    18601 cgccccggca atcaccgcgc cataaatatg gatcgggtaa cttggattcg gcaccagcac
    18661 cgtgtcacca tgatccagcg tcgccagcat cagatgcgcc aggccctctt tcgaaccaat
    18721 agtgacgatg gcttctgatt ccgggtcgat ttcaacgtcg tagcgatcct gataccagcg
    18781 ggaaatggcg cgacgtaacc gcggaatgcc gcgtgaagtg gagtaaccat gcgtgtcctg
    18841 gcgctgggcc acagtacata atttttcgac gatatgcggc ggagtcgcac cgtccgggtt
    18901 acccatgctg aaatcgataa tatcttcgcc gcgccgacgc gcagccattt tcagttcagc
    18961 ggtgatgtta aaaacgtagg gcgggagacg atcaatgcgc gtaaagcgac gttcagggcg
    19021 agtgtcagcc ataatttcct cagattaacg ttagcgcccg gaccgtccga gcgacgctgc
    19081 cacaatggtg gctgttttga aaatagcctg attaatttct gtctgtccag cgttttagaa
    19141 catttttatc aatggcttta aatgaggaac tccacttcaa aaacaggaaa tttttctacg
    19201 ctaacaagaa aattaccacc aattttatta acattataat ttcaataaat ttaccagcca
    19261 gaagtgcatt atcaagagat acattgctaa tacaccattt atctttcaat ccccttttaa
    19321 atttatggtt tttcctcaaa aacggcctgc tggtcatcag ccttcaggtt acctatcata
    19381 gaggtttaat ccttattcag agtcacccgt gcacgaaata ttcaacatgc tgctggcggt
    19441 cttcgatcgg gcagcgttaa tgcttatctg cctgttcttt ctcatccgta tccgcctgtt
    19501 tcgcgagctg ttgcacaagt cggcacactc cccaaaagag ttgcttgctg ttaccgccat
    19561 tttctcgctg ttcgccctgt tcagcacctg gtccggcgtt cccgtagaag gctcgctggt
    19621 gaacgtacgt attatcgcgg tgatgtccgg cgggattctg tttggcccgt gggtaggcat
    19681 cattaccggc gtgattgcgg gtattcaccg gtatttaatt gatatcggcg gcgtgacggc
    19741 gatcccctgc tttatcacca gcattctggc gggttgtata tcaggctgga taaacctgaa
    19801 aatccccaaa gcacagcgct ggcgcgtcgg tattctcggc ggcatgttgt gtgagacgtt
    19861 gaccatgatt ctggtaattg tctgggcacc aactaccgcg ttggggatcg atatcgtctc
    19921 taaaatcggc attccaatga tcctcggtag cgtctgtatc ggctttattg tgcttctggt
    19981 gcaaagcgtt gagggcgaaa aagaggccag cgccgcgcgg caggccaagc tggcgctgga
    20041 tatcgccaac aaaacgctac cgctgtttcg ccatgtcaat agcgagtcat tacgcaaggt
    20101 ctgcgaaatt atccgcgatg acattcacgc cgatgcggtg gcgattacta ataccgatca
    20161 tgtgctggcc tatgttggcg tgggtgaaca taactatcag aatggcgatg acttcattag
    20221 cccgactacc cgtcaggcga tgaattacgg aaaaatcatc attaaaaaca atgatgaagc
    20281 ccaccgcaca ccagagattc attccatgct ggtgatccca ttgtgggaga aaggcgttgt
    20341 gaccggaacg ctgaaaattt actactgcca cgcgcatcag ataacctcgt cattacagga
    20401 aatggcggtt ggtctgtcgc aaatcatctc cacgcaactg gaggtttcac gcgccgagca
    20461 gctacgtgaa atggcaaata aggcagagct tcgcgccctg caaagcaaaa ttaatcccca
    20521 ttttctgttt aacgctctga acgctatttc atcgtcaatc cgtctgaatc cggataccgc
    20581 tcgccagttg atctttaatc tgtcgcgtta tctgcgctat aacattgaat taaaagacga
    20641 tgagcaaatc gatatcaaaa aagagctgta tcaaattaaa gactatattg ccattgagca
    20701 ggcccgcttt ggtgacaagc tgacggttat ctatgatatt gatgaagagg tgaattgctg
    20761 cattcccagc ctgctgatcc agccgttggt ggagaacgcc attgtccacg gtattcagcc
    20821 ttgcaaaggt aaaggcgttg tcaccatcag cgttgcagag tgcggaaatc gggtacgcat
    20881 tgcggtgcga gataccggca cggcatcgat ccaaaggtga ttgagcgggt cgaagcgaat
    20941 gaaatgccgg gcaataaaat tggcctgctg aatgtccatc atcgcgtgaa gttattgtat
    21001 ggcgaggggc tgcatatccg ccgcctggag ccggggacgg aaattgcgtt ttacattcct
    21061 aaccaacgca ccccagtcgc ctcacaggct acgttattgc tttgagccgg agtgatattg
    21121 tgaaagtcat cattgttgaa gacgaattcc tggcacaaca ggaactgagc tggctaatta
    21181 aagagcacag ccagatggag attgtcggca cctttgacga cggtctggac gtgttgaagt
    21241 ttttgcagca taaccgcgtc gacgccattt ttctggatat caatattccg tcgctggatg
    21301 gcgtgttgct ggcgcaaaac atcagccagt tcgcccataa accgtttatt gtgttcatca
    21361 ccgcgtggaa agaacatgcg gtagaagcgt ttgaactgga ggcgtttgac tacattctca
    21421 aaccgtatca ggagtcacgt attaccggga tgctgcaaaa actggaagcg gcctggcaac
    21481 aacagcagac cagcagtacg cctgccgcga cggtaacgcg tgagaatgac accattaatc
    21541 tggtgaaaga tgagcgaata atcgtcacgc caattaacga tatctattac gccgaagcgc
    21601 acgagaaaat gacctttgtc tatacgcggc gtgaatccta cgtaatgccg atgaacatta
    21661 ccgaattttg cagcaaactg ccgccgtcgc attttttccg ctgccatcgc tcattttgtg
    21721 tcaatctgaa caaaatacgc gaaatcgaac cgtggtttaa taacacctac attctgcgac
    21781 tgaaagatct ggattttgaa gtgccggtca gccgcagcaa agtgaaagaa tttcgccagt
    21841 taatgcatct ttaatcggga actttcatga aagcaccagg cttgcccgcc gatcaacaat
    21901 ttttcgccga tctgttcagc ggcctggtgc ttaactcgca actactgggg cgcgtctggt
    21961 ttgccagcca gcctgcctcg ttaccggtgg gcagtttatg tattgatttt ccccgtctgg
    22021 atatcgtgct gcgcggcgaa tacggcaacc tgctggaagc aaagcagcag cgaatggtgg
    22081 aaggagaaat gctgtttatt ccggcacgcg cggctaattt accgatcaac aacaaaccgg
    22141 tgatgctgtt aagcctggtg ttcgcaccga cctggcttgg gttatcgttt tacgatagcc
    22201 gcaccacgtc gttgttgcat cctgctcgcc agatccagct tcccagcctg caacgcggtg
    22261 aaggtgaagc gatgcttacc gccctcactc atcttagccg ttcgccgctg gagcagaata
    22321 tcattcagcc actggtgtta agtttgctgc atctttgccg caacgtggtg aatatgccgc
    22381 cgggtaattc gcaaccgcgc ggcgattttc tctatcacag catttgtaac tgggttcagg
    22441 ataattatac ccagccgctc acccgcgaga gcgtggcgca gttttttaat atcacgccca
    22501 atcatctgtc aaaactgttt gctcagcatg gaacgatgcg ttttatcgag tatgtgcgtt
    22561 gggtgcgaat ggcgaaggcg aggatgattt tgcagaaata tcatctgtca attcatgaag
    22621 tggcacagcg ttgcggtttt ccggatagcg actatttttg tcgcgttttc cggcgtcagt
    22681 ttggtctgac gccgggagag tacagcgccc gttttcaggg ctaacgtcag aaggttaatt
    22741 ctgtttccag cagcgtcagg atactttgtg catcttgcgc ggcaaacaac gactggcgga
    22801 agtttttatt caccagttta cgcgccagct gcgagaagac tttcacatga ttcatccctt
    22861 cgttagcacc cagcgtcagc atgatcacca gttcgacttc gcccatttct gactgccagt
    22921 caatcggttt cgccagccgg gcaatgctga tactggaatg acggatccac tgagatttgg
    22981 tgtgcgggat cgctacgcca aaaccaacgc cggtggtaac aatctcttcc cgctgccaga
    23041 catcttcttc cagctcaaac ggatgttcag tgcgcccgtt aacgccgagg ttgccgcaca
    23101 ggaactggat cgcctgctct ttattgctaa aatcctgatc aacaaagata ttctccagcg
    23161 ccagcagtgg gcgaacgtct tcttccggcg taaaggcggt gagtaacgct tcaatttcct
    23221 gcgcactgcg gcattcacat gcctgacgcg ccagttcccg acacgcctcg ctatccagtt
    23281 gacgaagctg gcttttcacc gccggaatac gcgggctact catactcagc tcatccaggc
    23341 ccagcccaag cagtagcggc agataacggc tttcaccgcc cagttcaccg caaatgccta
    23401 cccatttgcc ccgctgatgc gcagtggtaa ctatttgctg caacatgcgc aggaacgatg
    23461 gcgtaatcgg gttatatagc ggcgatacgc gcgggttatt acgatcgacc gcatacagat
    23521 actgggtcat atcgttggag ccgatactga agaaatcgac ctcatcgcag aagtggtcga
    23581 tgatgtagca caccgacggc acttccacca tgatcccaag cgtaatcgtc tctgcatgac
    23641 gcaggccatc gcgcttaagc tcaacgatcg ctttttggat ctcgcccttc acccataaga
    23701 tctgatcgag actgtggacc atcgggatca tcaactgggc gttgccaaaa ctggcggcgc
    23761 gcaaaatcgc ccgtagttga gtgcggaaca ggccagcaaa ttccgggtaa atacgtaccg
    23821 cgcgatagcc gaggaacggg ttctcttcct ggggaatatt cagataagga atgcttttat
    23881 cgccaccgat gtccattgtg cggaagataa tcggcttgtc gcccgctgcc agtagcacct
    23941 gctggtaggc ttcaaattgc tcctgctcgt ccggcgcgct gtcgcgatcc atatagagca
    24001 tttcagtacg gaacagtcca acgccttccg cgccgttggc aaacgcgcct ggcgcttcca
    24061 gagcggtgcc gatattcgcc gcaatatcaa tacgcttgtt atcacgggaa taggccagct
    24121 gcgcggcggc ctgcgcctgt tgtttttggc gtttatccgc cagcgtctgt gcgacctgat
    24181 aataaccgct caccgcgtca ttcgggttaa tcgccagcac gccgcactgg gcgtcaagca
    24241 ccgccggttg cccggcataa cgggcaatcg catccagcgg caggccgctc agtaccggga
    24301 tcgccgaggc gcgggccaga atcagggtat gcgaggtgcg cccagttttc tccagaatca
    24361 tgcctgcaag attttttaaa tcgaggctca aaaactggct tggggttaaa tcctcggcta
    24421 ccagaatagt cggtttttcc agcaccagat tgttgcgcgg cttcagttcc ggccaggtga
    24481 tatgcagcaa ctgttcgcta atatcgcgaa tgtcgctaac acgttcgcgc agataatcac
    24541 tggcagaagc agaaagtttg gcgcaaacct gctccatatt gctgatgatc gccgccccca
    24601 gcccttgatg ctgttctgtc atcagacgac ggatattgcc cgcgaattca tcatcctgaa
    24661 tcagcgacaa atgggcgcta aggatagttt tgctttcgcc gtcactctca cgcaattgct
    24721 ggttcagttg ctcggcaagc gttgcaaggc tgtgctccag ccgggtggaa tcttgcgcac
    24781 tggcggggat tgcccgataa ctgtcgaggc tgtcgctttg taacagggtc agcgtaccca
    24841 cgccgacgct gcttgccagc acattgccgt acagtaaatc cgggttcagg cggcttaatg
    24901 aacgcggcag cggatgcgcc gtcagttctg cctgcgttgg ctggatgctg tcgctgtcga
    24961 taaagcgcac ctggatgtac tcttccaaca cgcgctgcgc ctgctcttca tcgctgccgc
    25021 taatgttcag gctgcaactg tcattaaata aagtaccggt gccaatcagc gccagcgagc
    25081 ttttcgcatc ggcctttgcg ttctggcgat ggttgataaa ggtgatttcg ctttgccact
    25141 ggctgcactg ttctttaagt tcccacgccg gacgagcatg aagaccgttt ggcaaaggac
    25201 agagaaattg aatcgttaac ataaccgctc cgggttaatc aggagatcat ctgaaatccg
    25261 tcagttgaac aaccgtctca cgcgtaagac gtttaataag ggcagataaa agctgctgca
    25321 tctgcaaaat gtcacggcaa tcggcaatcg atgcggcgca atgtccgtgg cgggttgctg
    25381 gccccatcac cactgtaggc acgccggtgc cggttaagtg caccgctccg ccgtccgtgc
    25441 cgccgttgct gaacatatct gcctgtaacg gcacgccaat ttctgccgcc acggtttcga
    25501 tccacgcggt aagttttggc ggcgcaatca gcgacttgtc gcttaacacc agcatcggcc
    25561 cgttacaaat ctgacgatgg ttagccgcgc cataatcaaa gtttttcgcc cagcaggcgg
    25621 tatcaagcac aatggcgaca tccggcgaca ccgcgcgggt ggcagtttgc ccgccgcgta
    25681 cccccacctc ttcgctggaa ctggccacca gccacacttc cgcaggcagt tcagcgctgt
    25741 gtagttcgcg cagtaacgtc accagcaggt agcaaccgag gcggtcatca aaggctttcc
    25801 ccatcacccg ctggtgaggg agaacctgaa aagttgtatc aaaggtgacg cgatcgcctg
    25861 gacgaattcc cgcctgcatc acttcgtcat acgagcgcgt accaatgtcc acgcgcatgg
    25921 cgctgacgtc attcccctgc cggtcgccgt caagcaggcc tggaattttg cactcttcac
    25981 gggtggtgat gcgcaccggc tgcagctggc gggcagccat gcgcacgttg ccaaccggca
    26041 gcacatcaat tgccccttcg cgggagatgc tgcgcaccat aaatcccact tcgtccatat
    26101 gggcgcagat catcaccttc ggccctgtcg attcattgag gcggatcagc accgatccca
    26161 gaccatcaaa tcgcacttct ttttgcaggc gatccgcttc ttccagcagg atctgccgca
    26221 cttcctgttc cgaggaggcg atcgcatctg cctcgctcaa cgcttttaat agcgataaat
    26281 ccattatgcc tctcccgtga gcaacactgt tttcggcatg gcgtagagca cttctgcgcc
    26341 ttgcggggta accagcacaa catcttcgat gcgcacgccc ccttgccctg gcaaataaat
    26401 ccccggctcc acggtcagca acatgcctgg ctgtagcgtc gtggtgtccc gcggtgaaaa
    26461 acgcggatct tcatggactt caatgccgat agcgtgacca gtgttatgac cgaaatagtc
    26521 gccaaatcca gcctcggtaa tgacccggcg cgcggcgtcg tcaatctgct ggcagcgcac
    26581 gccggggcga attgcagaga ttgccgcgag ctgtgcctgc aggacaatct gatagacgtc
    26641 aaacagcggg tgagattcgg cgctcacccc ttcgccattc accagcaagg tgcgcgtcat
    26701 atcagagcag tagccctgat acagcgcacc aaaatcgaga gtgacaaact cgcccgctgc
    26761 aacaatcttg tcgctggctt tgccgtgcgg cagcaccccg cgccagccgc tggcgacaat
    26821 ggtgtcaaaa gaggcttttt ctgcgccctg ctggcgcata aaccactcca gttcagcggc
    26881 tatctcgcgc tcgctcatcc ccgcctgaat aaagcggcga atatgctccg ctccgcgatc
    26941 ggcaatccca caggcgaggc ggattatctc cacctcctct ggcgttttga tttgccgcag
    27001 cacatccggc gtggcgctaa ccagtttcgc attgagttca gacttccagc ggtgcgcggt
    27061 ttcccaactc acctgctggc cttcaaaacc gagcgtttgc aactgctcat cggcaatgat
    27121 ttgattgacg atagtggtaa gcgtgttcgt cgcgtcaagc aaatgcagct ggtagccttg
    27181 cgcacgggct tccacctcaa cgaaatagct cgaatctacc agaatgtgcg cactttcacg
    27241 gctaataacc acatagcctg atccggtgga gatccccaga tgcggctgtt tgttctgccg
    27301 tgaggagaga agcactgcat ccagttgttg ctccttaagc cagtcgcgca gcgaagcgag
    27361 taatgtcatc tggattttcc ttcttacagg ctatcgatta acaatttgcc tttacggaac
    27421 atcatcagac gcaggaacac caccatcagc gcagttatga ctgcccccag cgcgatcccc
    27481 gccatataga cgccaaggtt agtgaccagc ggccatgccc agatagcgga ttccgggaac
    27541 cattgcactg cgcccagcca gacagcggcg gttgagccga caatcgcgcc gaccatatac
    27601 gacggaatgg cggtgatggg gctttccagc gcaaacggaa tcgcaccctc actaatcccc
    27661 ataaaggcaa ggaacatcgc ggtcttaccc tgcggataaa gttgagcgtt gaacaggcgt
    27721 ttgccggtta aacgacggtc aataatggtc gccagcccca gaccaatcgg aggaataacg
    27781 atagcgatag aacgagcggt gaccggtaat acgtggtcag tggtaaagct gaaggcaacg
    27841 aaacctgcgg ctttgttgat cgggccacca aggtcgattg ctgtcgccgc ggcgatcccc
    27901 attgcgtaca tcagcgcgcc cttctcacct gcggcagtca gcacggtacg gataacgccg
    27961 ttgatccagc cgccaaaggg ggtaatgacg tagtacatcg ccagcatgac aaaaatggcg
    28021 gaaagaatcg gtagcaaaaa tgtggttttg aacgctaaca ggaaatccgg taactggatt
    28081 ttctggttca tccacttcac aaggtaaccc gcgacgatag aaataatcag cgcaccaatg
    28141 aaggtggacg gcaccggcga agaggtcgcc cattgcatag tgctgggatc gaagttcagc
    28201 agttgcgtcg gctgggtaga catcaagccg ccgataaaac cagccgggaa cgccagtttg
    28261 ccaccgatag agttcgccac aaaagcagca aacatcggaa tggcaaaacc aaacaacacg
    28321 ccgccgaagg actgcgacag ccaggcaaat ttcagtaagg agaggtcgaa accggagaat
    28381 ttcccgctat taagagcatc catgatgccg atctcagcag gaattttaag ccagctataa
    28441 gcaatcagct ggctgaaagc gaggatcaca ccgcccataa ttaaggtcgg caccatgcgt
    28501 gaaatccctg acatcacatg ctgcgggagt tcaccccaga agctgctttt agaggcctgc
    28561 ggattcttaa ctgccgctgc cgcaccggat gcgccaggca caacggttgc actgcgtttt
    28621 ttaatggcca taacaattat ccctgtcgaa tattactgtt gttcagaggc aatcatctct
    28681 tcgatttctt tgatgatgcc cgcagcgttt ttaattgcgt cctgcaaagt gatttcataa
    28741 acgtcgcgtg attcgaaacg ctcattatct tccggggtaa ctgccacgga gtggatgatg
    28801 atggttgctt cggcgatatc ctgcgccgtc aggcgattct ggataccgtc cgcgccctgg
    28861 gtttcaattt tcacttcata accggcttct accgccgctt cttccaacgc ctgagcggcc
    28921 ataaaggtgt gagccaggcc cattgggcag gcacataagg caatcagttt cttactcatc
    28981 gttaattcct cattcagtga tagttgacaa gtgaaattat gaacgtgcaa aacaaatcgc
    29041 cgttaccaga caaataatgc atttactgga gaattaatcc cgctgtacgg aagtgtgacg
    29101 caggtcggcc ttgtgagggg acacaaagaa aaattgaatt aactgtatga tttaaacgat
    29161 tatcgggaga gttacctccc gatataacag gaaggattta cagaatgtgc cctaaggtct
    29221 ggcgtaaatg tgcaccggaa ccgagaagac ccggattgtc atggacgatg agatacaccg
    29281 gaatatcatg gacatattct ttaaagcgcc ctttatcttc aaatgcagca cggaaaccag
    29341 aggctttgaa gaactcaagg aagcgcggca cgataccgcc cgcaataaac acgccgccaa
    29401 atgtcccgag attgagcgcc agattgccgc caaaacggcc cataatgacg caaaacagcg
    29461 acaacgcgcg gcggcaatcg gtacagctgt cagccagcgc gcgttcggta atatcttttg
    29521 gcttgagatt ttctggcagg cggttgtcag ctttcacaat tgcgcgatac aaattcacca
    29581 gcccagggcc agaaagcacg cgctccgccg aaacatgacc aatttccgca cgcaatattt
    29641 cgaggataat ggcctcttct tcactattcg gcgcaaaatc aacgtgaccg ccttcgcccg
    29701 gcaagcttac ccaacgctta tcgacatgga ccagatgcgc aaccccaagc cctgttccgg
    29761 caccgtaaac cgcaataggt ttaccttcta ccggttctgc gccaccaaac tgaatcagat
    29821 gctctttttt cagcatcggg atcgccatcg atacagcggt aaaatcgtta ataatttcca
    29881 gatggctaaa accgagattc tttttcattt cggcaattga gaacgcccag gtatggttgg
    29941 tcattgccac ccagtcaccg gtaattgggc aagcgatggc aatacagccg tctttcacct
    30001 cgaccttatg ttcttcaaga taaacgcgaa tgaccgcttc gaggctgggg taatcaagcc
    30061 ctgaataggt cttagcctgc gagatttcac cactggcaat atcacacaga gcaagacgtg
    30121 cgttggtgcc gcccacatca ccgactaatg catactttat cattcttcaa ctgctccgct
    30181 aaagtcaaaa taattctttc tcacactgta aatacctggg ggcataacaa caacgccgga
    30241 aaggcaggct ccctgtaaat atcgatctgg gtcacacatt tactttatcg tttcagcacc
    30301 aattgcagcg atgccttttt gcaagctggg caaactaagt atctgacccc gcataaggaa
    30361 tagaacatgc tccatccgcg agccagaacc atgttgttat tatcgctccc cgccgtggca
    30421 attgggattg cgtccagtct tattctgatt gtggtgatga aaatcgcctc ggtattacag
    30481 aatttgctct ggcaacgact gccgggaact ctggggatag cccaggattc acctctctgg
    30541 atcatcggtg tattaacgct aacgggtatt gcggtggggt tggttatccg tttcagccag
    30601 ggtcatgccg gaccagaccc cgcctgtgaa ccgctgatcg gcgcaccagt tccgccctct
    30661 gcgctaccag gacttatcgt agcattaatt ctcggtcttg ctggcggcgt cagcctgggg
    30721 ccggaacatc cgatcatgac catcaatatc gcccttgccg tcgccattgg cgctcgtctg
    30781 ttaccgcgcg tcaaccgaat ggagtggact attttagcct ctgccggaac catcggcgcg
    30841 ctgtttggca cacctgttgc agcggcgttg atattttcgc aaaccttaaa tggcagtagt
    30901 gaagttccgc tatgggatcg tctctttgcg ccgttaatgg cggcagcagc tggtgcacta
    30961 actaccggat tatttttcca tccccatttt tcactgccca ttgcgcatta cggacagatg
    31021 gaaatgaccg atattctcag cggtgcaatt gtcgcggcga ttgccatcgc agcagggatg
    31081 gtcgccgtat ggtgcttacc acggttgcac gcgatgatga atcaaatgaa aaatccggtg
    31141 ctcgtgctgg gtattggcgg atttattctc ggtattctgg gggttattgg tggaccagtt
    31201 tcgctgttta aagggctgga tgagatgcag cagatggtgg caaatcaggc tttcagcacc
    31261 agcgattact ttttgctggc ggtaattaaa cttgccgccc tggtcgttgc tgccgccagt
    31321 ggctttcgcg gtgggcgaat cttcccggca gtgtttgtcg gcgtggcatt agggttgatg
    31381 ctgcatgagc acgtacccgc cgtaccagcg gcaataaccg tttcttgcgc tattctcggc
    31441 atcgtgctgg tggtaacacg cgatggctgg ttaagtcttt ttatggcggc ggtcgttgta
    31501 cccaatacca cattgctacc gctgctctgt atcgtcatgc ttccggcatg gctgttatta
    31561 gcaggtaagc cgatgatgat ggtcaatcgt ccgaagcaac agccacccca cgataacgtt
    31621 tagcaaaaaa tgctctcctt tatgatttaa gagttatggc gatgatacgg ggctttacct
    31681 ccccgtaata ttgcgttaac aggccgctga cggcttcgat cgtgaaggag aataacaatg
    31741 ttcaggtcac tgtttctggc ggccgccctg atggcattta ccccgcttgc agcaaacgca
    31801 ggtgaaatca ccctactgcc atcaatcaaa ttacaaattg gcgatcgcga tcattacggt
    31861 aattactggg acggtggtca ctggcgcgac cgtgactact ggcatcgcaa ttatgagtgg
    31921 cgcaaaaacc gttggtggcg tcatgataat ggctatcatc gtggctggga taagcgtaaa
    31981 gcgtatgagc gtagctatcg tgaaggctgg cgcgatcgtg acgatcatcg cggaaaaggc
    32041 cgcggacatg gacaccgcca ttaaacacat tcgccaatgg agcacaatgc ctgatgcgac
    32101 gctagcgcgt cttatcaggc ctacaaaccg gatctttaac gcgtagggcg gataaggcgt
    32161 ttacgccgca tccgccaata gtgccagatg cgacgctcat tcaactacaa tcccagcgcc
    32221 gtccccacca acaaccagat attcagcgcc acgaccagca ctacaatcac ccagcctgtc
    32281 tgttttacgc gtttgctgtt caccagatcg cccatcaact tgctgtcact ggtgaaaatc
    32341 agcagtggaa ccagcgccag ggcgatacca aaacttaaca gcacctgact cataaccaga
    32401 atccgtgtcg gatctaatcc catcagaatg acaataaatg acggcagcat ggtgactgta
    32461 cgacgcaccc acagcgggat atggaagcga atgaacccct gcatcaccac ctgccctgcc
    32521 agtgtcccca ctaccgttga ggacagtccg gcagcaacca gacttaaccc aaagaccgtt
    32581 gccgcagcat ggcttaacag cggttgcagc gtcagataag cctcatcaag atcggcaaca
    32641 ccagtatgac cagaaaagtg gaacgccgcc gcagctgtag ccatcatcgc cagattgaca
    32701 aaaccggcaa tagtcatggc gatagccaca tcccatttgg tggcggaata acgttgttga
    32761 cgcgaaccgc catgtaaatg ctgagtgagc gaggagtgca aataaatcac atgcggcata
    32821 atcgtcgccc ctaacacgcc tgctgccagg aagaccgctt ccgaagtagg taaactcggg
    32881 agcaccattc ctttacccag ctgcgccagg ttaggctggg agaaaatcaa ctcgacaatg
    32941 taagccgcgg caacaaacaa cagtaacccg ccaatcactt tctccagcgt tttttgcccg
    33001 cgacgttgca gcattaaaat caggaaagtc gcgatccccg tcagcaccgc gccctgcaac
    33061 aacgaaacac caagaatgag tttaaaaccg atcgccgcac caataaattc cgccaggtcg
    33121 gttgccatcg caataatttc tgcctgaacc caatagaacc acactacggg acgcggatag
    33181 tgatcgcgaa tctgctccgc cagattttta ccggtggcaa tccctagttt ggcagagagg
    33241 atctgaatca gcatcgccat caggttggcc caaacgacaa cccacagtag ctgatagccg
    33301 aagctggcac ccgcctgaat attggtcgca aagttaccgg gatcgatata accaatcgcc
    33361 gcaatgaacg caggtcccat taatgcgagc ctcatcttgc gcgccgcccg tccgctgcta
    33421 ctctcaacgc gatagttcgt catcttgtgc ctctaaaaca tagcctttgc tatgtttcat
    33481 gctatgataa acgagaatga ttatcaaatt catttaaatg gattgtggtg atttctgtga
    33541 tagaccagga ttatgactac gaaaagattg atgacttgaa tgttatggtt atgtttaatg
    33601 ttagcacatt tacataactt tcagcttcca tacacaacat agcagaaatg tatgacagat
    33661 cactattttt gaagcctgtc acaggacgtc attatagtgt gtgtcagatc tcgttttcct
    33721 taaccatgtt acatagaatg tgcacggaaa tttaacctgc ctcatatttg gagcaaatat
    33781 ggaccgcgtc cttcattttg tactggcact tgccgttgtt gcgattctcg cactgctggt
    33841 aagcagcgac cgcaaaaaaa ttcgtatccg ttatgttatt caactgcttg ttatcgaagt
    33901 gttactggcg tggttcttcc tgaactccga cgttggttta ggcttcgtga aaggcttctc
    33961 cgaaatgttc gaaaaactgc tcggatttgc caacgaaggg actaacttcg tctttggtag
    34021 catgaatgat caaggcctgg cattcttctt cctgaaagtg ctgtgcccaa tcgtctttat
    34081 ctctgcactg atcggtattc tccagcacat tcgcgtgttg ccggtgatca tccgcgcaat
    34141 tggtttcctg ctctccaaag tcaacggcat gggcaaactg gaatccttta acgccgtcag
    34201 ctccctgatt ctgggtcagt ctgaaaactt tattgcctat aaagatatcc tcggcaaaat
    34261 ctcccgtaat cgtatgtaca ccatggctgc cacggcaatg tccaccgtgt cgatgtccat
    34321 cgttggtgca tacatgacca tgctggaacc gaaatacgtc gttgctgcgc tggtattgaa
    34381 catgttcagc acctttatcg tgctgtcgct gatcaaccct taccgtgttg atgccagtga
    34441 agaaaacatt cagatgtcca acctgcacga aggtcagagc ttcttcgaaa tgctgggtga
    34501 atacattctg gcaggtttca aagttgccat tatcgttgcc gcgatgctga tcggctttat
    34561 cgccctgatc gctgcgctga acgcactgtt tgccaccgtg actggctggt ttggctacag
    34621 catctccttc cagggcattc tgggctacat cttctatccg attgcatggg tgatgggtgt
    34681 tccttccagt gaagcactgc aagtgggcag tatcatggcg accaaactgg tttccaacga
    34741 gttcgttgcg atgatggatc tgcagaaaat tgcttccacg ctctctccgc gtgctgaagg
    34801 catcatctct gtgttcctgg tttccttcgc taacttctct tcaatcggga ttatcgcagg
    34861 tgcagttaaa ggcctgaatg aagagcaagg taacgtggtt tctcgcttcg gtctgaaact
    34921 ggtttacggc tctaccctgg tgagtgtgct gtctgcgtca atcgcagcac tggtgctgta
    34981 agaccataca taaaaaagcc ggggataatt cc
//
LOCUS       DADKRT010000020        34647 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.020, whole genome shotgun sequence.
ACCESSION   DADKRT010000020 DADKRT010000000
VERSION     DADKRT010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 34647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34647
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.020"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..53)
                     /locus_tag="JQ356_000837"
     CDS             complement(<1..53)
                     /locus_tag="JQ356_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY4621009.1"
                     /translation="MMKLLIIVVLLVISWPA"
     gene            332..1579
                     /gene="mdtA"
                     /locus_tag="JQ356_000838"
     CDS             332..1579
                     /gene="mdtA"
                     /locus_tag="JQ356_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HAY4621010.1"
                     /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQ
                     QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTIIAANTVTVRSRVDGQLMALH
                     FQEGQQVKAGDLLAEIDPSQFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLV
                     SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS
                     SGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL
                     LSLDNQIDATTGMIKVKARFNNQNDVLFPNQFVNARMLVDTEQNAVVIPTAALQMGNE
                     GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGNRVVTDGIDRLTEGAKVEVVE
                     AQSATTPEEKATSREYAKKGARS"
     gene            1579..4701
                     /gene="mdtB"
                     /locus_tag="JQ356_000839"
     CDS             1579..4701
                     /gene="mdtB"
                     /locus_tag="JQ356_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HAY4621011.1"
                     /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS
                     ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM
                     TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAE
                     NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTT
                     NIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLIFS
                     LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN
                     RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD
                     NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ
                     INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT
                     SLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA
                     LYSAFGQRLISTIYTQANQYRVVLEHNTEITPGLATLDTIRLTSSDGGVVPLSSIAKV
                     EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGST
                     LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGS
                     ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTT
                     LAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTK
                     SRFARHEEEA"
     gene            4702..7779
                     /gene="mdtC"
                     /locus_tag="JQ356_000840"
     CDS             4702..7779
                     /gene="mdtC"
                     /locus_tag="JQ356_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HAY4621012.1"
                     /translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN
                     GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGKLYDFAST
                     QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQG
                     ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
                     AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
                     EQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAL
                     TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
                     LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
                     VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA
                     DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ
                     QIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRK
                     KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY
                     QPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL
                     SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI
                     IAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI
                     GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSG
                     GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
     gene            7780..9196
                     /locus_tag="JQ356_000841"
                     /pseudo
     CDS             7780..9196
                     /locus_tag="JQ356_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            9193..10596
                     /gene="baeS"
                     /locus_tag="JQ356_000842"
     CDS             9193..10596
                     /gene="baeS"
                     /locus_tag="JQ356_000842"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeS"
                     /protein_id="HAY4621013.1"
                     /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
                     HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
                     WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
                     KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
                     ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
                     TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
                     LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFAD
                     SAPGVSDEQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
                     VSITVELPLERDLQREV"
     gene            10593..11315
                     /gene="baeR"
                     /locus_tag="JQ356_000843"
     CDS             10593..11315
                     /gene="baeR"
                     /locus_tag="JQ356_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HAY4621014.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
                     QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
                     LTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRIV"
     gene            11506..11838
                     /locus_tag="JQ356_000844"
     CDS             11506..11838
                     /locus_tag="JQ356_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310915.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HAY4621015.1"
                     /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIA
                     SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGT
                     SQTVKDNT"
     gene            11961..13361
                     /locus_tag="JQ356_000845"
     CDS             11961..13361
                     /locus_tag="JQ356_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000911981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HAY4621016.1"
                     /translation="MLKGLRTLFSRRVLFNVEMNNSVDCELLLIQQQLQALIAEPGNY
                     LAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGHKEDVAAIEELLLAANDWVKEVRLA
                     ATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHRAFVDEILRYLLTENNRPQLTYW
                     LTCPDKKLSRAVLQTLIEYGYFNDESSLLSILDKPDEGLRMLATTHWLRQQLPLSEAV
                     LTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNNMLIRLRAKNMLHEVMDVP
                     QFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQNVFPLRLAAMHILAKA
                     NPRCGVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQLQENAPSVKHACAYC
                     RLYHNLNKWDGLILLLQSQHKLTEEFAGKQLAIWQRNFNLSGIQPNALQRQQLQALFT
                     RNPELHNRLWGYIPFK"
     gene            13682..15043
                     /locus_tag="JQ356_000846"
     CDS             13682..15043
                     /locus_tag="JQ356_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HAY4621017.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREYFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM
                     TPQGNINFTLEHMENAKGVAMPVAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
                     HGK"
     gene            complement(15373..15690)
                     /locus_tag="JQ356_000847"
     CDS             complement(15373..15690)
                     /locus_tag="JQ356_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621018.1"
                     /translation="MKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQRKLDN
                     QYYTEAEASLARSRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFK
                     CGE"
     gene            16104..17002
                     /gene="yegS"
                     /locus_tag="JQ356_000848"
                     /pseudo
     CDS             16104..17002
                     /gene="yegS"
                     /locus_tag="JQ356_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310919.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
     gene            complement(17084..17863)
                     /locus_tag="JQ356_000849"
     CDS             complement(17084..17863)
                     /locus_tag="JQ356_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY4621019.1"
                     /translation="MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRF
                     LEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
                     VILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMH
                     GSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKF
                     NRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV"
     gene            complement(17963..19003)
                     /gene="gatD"
                     /locus_tag="JQ356_000850"
     CDS             complement(17963..19003)
                     /gene="gatD"
                     /locus_tag="JQ356_000850"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY4621020.1"
                     /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR
                     IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
                     CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITIGLHAFHLAQGCE
                     NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGSMQTFNSSEMSAP
                     QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
                     LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
                     RNAMPGKVLLIP"
     gene            complement(19051..20397)
                     /locus_tag="JQ356_000851"
     CDS             complement(19051..20397)
                     /locus_tag="JQ356_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HAY4621021.1"
                     /translation="MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
                     AILVNVAMLLTRMTRVVNIDIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDW
                     FARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPF
                     GEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQAR
                     SRLQAKFGGQEFLIGLDPALLLGHTAVVSVSLIFIPLTILIAVCVPGNQVLPFGDLAT
                     IGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGGMVA
                     SMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFITWRRARGFIKQEKAVLAE"
     gene            complement(20401..20685)
                     /gene="gatB"
                     /locus_tag="JQ356_000852"
     CDS             complement(20401..20685)
                     /gene="gatB"
                     /locus_tag="JQ356_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HAY4621022.1"
                     /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI
                     ETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG"
     gene            complement(20716..21168)
                     /gene="gatA"
                     /locus_tag="JQ356_000853"
     CDS             complement(20716..21168)
                     /gene="gatA"
                     /locus_tag="JQ356_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HAY4621023.1"
                     /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIARE
                     AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALI
                     VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
     gene            complement(21178..22440)
                     /gene="gatZ"
                     /locus_tag="JQ356_000854"
     CDS             complement(21178..22440)
                     /gene="gatZ"
                     /locus_tag="JQ356_000854"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
                     /protein_id="HAY4621024.1"
                     /translation="MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIE
                     ATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAA
                     MEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQ
                     REQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIVRGLTEALTRVIA
                     IVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFA
                     ILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGF
                     NDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQS
                     GELSAIPHQLIMDKIYDVLRAYRYGCAE"
     gene            complement(22469..23323)
                     /gene="gatY"
                     /locus_tag="JQ356_000855"
     CDS             complement(22469..23323)
                     /gene="gatY"
                     /locus_tag="JQ356_000855"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatY"
                     /protein_id="HAY4621025.1"
                     /translation="MHVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
                     VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM
                     IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQA
                     REFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI
                     QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATEPRDYLQSAKSAMRDVVSKVIA
                     DCGCEGRA"
     gene            complement(23631..24683)
                     /gene="fbaB"
                     /locus_tag="JQ356_000856"
     CDS             complement(23631..24683)
                     /gene="fbaB"
                     /locus_tag="JQ356_000856"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HAY4621026.1"
                     /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI
                     EAGCNCVVSTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
                     AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
                     ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKITIA"
     gene            24940..26217
                     /locus_tag="JQ356_000857"
     CDS             24940..26217
                     /locus_tag="JQ356_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4621027.1"
                     /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT
                     NIPLLITAGSSALLGVFAFFLPGTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII
                     AVLFMIFFCESDNEITAIKVDDRDIALTQGEVK"
     gene            26214..27218
                     /locus_tag="JQ356_000858"
     CDS             26214..27218
                     /locus_tag="JQ356_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HAY4621028.1"
                     /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTSMALCLADALLERKGKIDPDLIGRNILDWALRFDAFNKN
                     VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALAS
                     SPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSITRHAQQKRTTTFSASLAAR
                     LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGINAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV
                     "
     gene            27215..28180
                     /locus_tag="JQ356_000859"
     CDS             27215..28180
                     /locus_tag="JQ356_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY4621029.1"
                     /translation="MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYALPWRGCDIE
                     LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL
                     LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
                     ITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL
                     AGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV"
     gene            complement(28154..28900)
                     /locus_tag="JQ356_000860"
     CDS             complement(28154..28900)
                     /locus_tag="JQ356_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY4621030.1"
                     /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW
                     VPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI
                     KQVALDQQQRPIEYSISHCRSDLYVFVCEE"
     gene            complement(28952..29770)
                     /locus_tag="JQ356_000861"
     CDS             complement(28952..29770)
                     /locus_tag="JQ356_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 25 family protein"
                     /protein_id="HAY4621031.1"
                     /translation="MQLRITSRKKLTSLLCALGLISIVAIYPRQKVNFFYSTAVQITD
                     YIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKAT
                     EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVAAPVQARLFLQTVDFSQGDFPAVL
                     DVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
                     YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP"
     gene            complement(29835..30635)
                     /gene="thiD"
                     /locus_tag="JQ356_000862"
     CDS             complement(29835..30635)
                     /gene="thiD"
                     /locus_tag="JQ356_000862"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HAY4621032.1"
                     /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
                     NTRGVQSVYRIESDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQYV
                     VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
                     QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
                     LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW"
     gene            complement(30632..31420)
                     /gene="thiM"
                     /locus_tag="JQ356_000863"
     CDS             complement(30632..31420)
                     /gene="thiM"
                     /locus_tag="JQ356_000863"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HAY4621033.1"
                     /translation="MQVDLQSSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLAL
                     GASPAMVIETEEASQFAAIASALLINVGTLTQLRAQSMCAAVEQAKSSQTPWTLDPVA
                     VGALDYRRRFCLELLPHKPTAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTL
                     ARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTL
                     ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
     regulatory      complement(31455..31551)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(33132..33425)
                     /locus_tag="JQ356_000864"
     CDS             complement(33132..33425)
                     /locus_tag="JQ356_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000274322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621034.1"
                     /translation="MYGQDTTAGGNLKKDSPLGKLWDFLHSPDLPTNPDFAKPADKTG
                     WVSSYSNPTYVPPTPTITAPQLKVDMAGNPLMTPPAWLNQPLNVNVNVKVQDG"
     gene            complement(33389..>34647)
                     /locus_tag="JQ356_000865"
     CDS             complement(33389..>34647)
                     /locus_tag="JQ356_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HAY4621035.1"
                     /translation="MIEGAGGAITIAATVALSGKIMTTGQDFESALSGLTAITGSTDK
                     AAKEFDYLRDQSNRLGLDLLKTSRDYTQFAAAVGDKLPKDQMRSIFEGASEWGLVTGA
                     SADEASRALKSLNQMMSKGTVMSEELKGQLSEALPGAVGLFVKALNQMKGTTNLTEKD
                     LFDLMQQGKLFSKDILPEVAKQMKAAARNGGALDKAMKSNRASWQRLQTSMQNAMNIF
                     FASGFGNELTSAFDAISAAVNGSGGAFEMFGHIAGKIVEGATDAFTELHDTVILTFRI
                     IEYYASKMGITGEQLKAWGEMAAYAAGVAMFAGSIWKLGVAFKWLLTMLNPLTKLLGV
                     MKGIAAIGGIEAATTGGSGGEGKDKPNKPGRGPKVGKVGGAAALSGGPVGWSIAVGSV
                     GGDYAWDKVMTLTTPCMDRTPPPGAI"
BASE COUNT         8285 a         9075 c         8705 g         8582 t
ORIGIN      
        1 taagctggcc agctaatgac taagagcacc acgatgatga gtagcttcat catgaccctt
       61 tccttattta tggccccttc ctcgggaggg gctttcccgt ttcagcgtcc cgctgaaatc
      121 ggcggcttac ctcctttcgc catgcaagca gtctatccct aacgcgtaga taaaatagtt
      181 tcctgtgtta ttactggatg cgtgctcgca aatgtgcccg tcattcagac aattcccgac
      241 agtgtttcat aattcctcca tttttctccc ttattggctg gctacactag tatcattccg
      301 cgaaacgttt caggaagaga aactcttaac gatgaaaggc agttataaat cccgttgggt
      361 aatcgtaatc gtggtggtta tcgccgccat cgccgcattc tggttctggc aaggccgcaa
      421 tgactcccgg agtgcagccc caggggcgac gaaacaagcg cagcaatcgc cagcgggtgg
      481 tcgccgtggt atgcgttccg gcccattagc cccggttcag gcggcgaccg ccgtagaaca
      541 ggcagttccg cgttacctca ccgggcttgg caccattatc gccgctaata ctgttacggt
      601 gcgcagccgc gtggacggtc aactgatggc gttacatttc caggaaggcc agcaggtcaa
      661 agcaggcgat ttactggcag aaattgaccc cagccagttc aaagttgcat tagcacaaac
      721 ccagggccaa ctggcaaaag ataaagccac gcttgctaac gcccgccgtg atctggcgcg
      781 ttatcagcaa ctggcaaaaa ccaatctcgt ctcccgtcag gagctggatg cccaacaggc
      841 gctggtcagt gaaaccgaag gcaccattaa ggctgatgaa gcaagcgtcg ccagcgcgca
      901 gttgcaactc gactggagcc gcatcaccgc accagtcgat ggtcgcgttg gtctcaagca
      961 ggttgatgtt ggtaaccaaa tctccagtgg tgataccacc ggaattgtgg tgatcaccca
     1021 gacgcatcct atcgatttag tctttaccct gccggaaagc gatatcgcta ctgtagtgca
     1081 ggcgcaaaaa gccggaaaac cgctggtggt agaagcctgg gatcgcacca attcgaagaa
     1141 attaagtgaa ggcacgctgt taagcctcga taaccaaatc gatgccacaa ccggtatgat
     1201 taaagtgaaa gcacgcttta ataatcagaa tgatgtgctg tttcccaatc agtttgttaa
     1261 cgcgcgcatg ttagtcgaca ccgaacaaaa cgccgtagtg atcccaacag ccgccctgca
     1321 aatgggcaat gaaggccatt ttgtctgggt gctgaatagc gaaaacaagg tcagcaaaca
     1381 tctggtgacg ccgggcattc aggacagtca gaaagtggtg atccgtgcag gtatttctgc
     1441 gggcaatcgc gtggtgacag acggcattga tcgcctgacc gaaggggcga aagtggaagt
     1501 ggtggaagcc cagagcgcca ccactccgga agagaaagcc accagccgcg aatacgcgaa
     1561 aaaaggagca cgctcctgat gcaggtgtta cccccgagca gcacaggcgg cccgtcgcgc
     1621 ctgtttatta tgcgtcctgt cgccaccacg ctgctgatgg tggcgatctt actcgccggg
     1681 attatcggtt atcgcgccct gcccgtttcg gcgctgccgg aagtggacta tccgaccatt
     1741 caggtggtca cgctctaccc aggtgccagc ccggatgtca tgacctctgc cgttaccgcg
     1801 ccgctcgaac gccagttcgg gcagatgtct ggcctgaaac agatgtcgtc gcaaagttcc
     1861 ggcggtgcgt cagttatcac tttgcagttc cagctaacat taccgctcga tgtcgccgag
     1921 caggaagtgc aggccgcgat taacgctgcg accaacttgt tgccgagcga tctgcctaac
     1981 ccgccggttt acagcaaagt gaacccggca gatccgccga tcatgacgct cgccgtcacc
     2041 tcaaccgcca tgccgatgac gcaagtggaa gatatggtgg aaacccgcgt cgcgcagaaa
     2101 atctcgcaga tttccggcgt cggcctggtg acgctttccg gcggtcagcg tccggctgtt
     2161 cgcgtcaaac ttaacgctca ggcgattgcc gccctcggcc tgaccagcga aaccgtgcgc
     2221 accgccatta ccggcgctaa cgttaactcg gcaaaaggta gcctcgacgg cccttcccgt
     2281 gcggtcacgc tttccgcgaa cgaccagatg caatccgccg aagagtatcg ccagctaatc
     2341 atcgcctacc agaacggcgc gccaattcgt ctgggcgatg tcgcaactgt agagcaaggt
     2401 gcagaaaaca gctggctcgg cgcgtgggcg aacaaagaac aggccattgt gatgaatgtt
     2461 cagcgccagc ccggtgctaa cattatctcc accgccgaca gcattcggca gatgctgcca
     2521 cagctcactg agagtctgcc gaaatcggtg aaggtgacag tgctttccga tcgcaccacc
     2581 aatatccgcg catccgtcga tgatactcag tttgaattga tgatggctat cgcgctggta
     2641 gtcatgatta tctacctgtt tttgcgcaat attccggcga ccatcattcc cggtgttgct
     2701 gtaccgctgt cgttaatcgg cactttcgcg gttatggtgt ttctcgattt ttcaatcaat
     2761 aacctgacac tgatggcgtt aactatcgcc accggattcg tggtcgatga cgccatcgtg
     2821 gtgatcgaaa acatttcccg ctatatcgaa aaaggcgaaa aaccgttggc ggcggcgctc
     2881 aagggcgcag gtgaaatcgg ctttaccatt atctcgctga tcttctcact gattgcggtg
     2941 ttgatcccac tgctgtttat gggcgatatc gtcgggcgac tgttccgcga atttgctatt
     3001 accctggcgg tagcgatttt gatctcagcg gtggtgtcgc tgaccctgac accgatgatg
     3061 tgcgcgcgga tgctcagcca ggagtcgttg cgtaaacaga accgcttctc ccgtgcctcg
     3121 gaaaaaatgt tcgacaggat aatcgccgcc tatggtcgtg gactggcgaa agtgctgaat
     3181 catccgtggc tgaccttaag cgtggcactc agcacgctgc tgcttagcgt gctgctgtgg
     3241 gtgttcattc cgaaaggttt cttcccggta caggacaatg gcattattca gggcactttg
     3301 caggcaccgc aatccagctc ctttgccaat atggcccagc gacaacgcca ggtcgcggac
     3361 gtgattttgc aggatccggc agtgcaaagc ctgacctcat ttgttggcgt tgatggcact
     3421 aacccgtcgc tgaatagtgc acgtttacaa atcaacctca aaccgttgga tgaacgtgat
     3481 gatcgggtgc aaaaagtcat cgcccgtctg caaacggcgg tagataaagt gccgggcgtc
     3541 gatctcttcc tgcaaccaac gcaggatctg actattgata ctcaggtcag ccgcacccag
     3601 taccagttta ccttgcaggc cacctcactg gatgcgctca gtacctgggt gccacagttg
     3661 atggaaaaac tccagcaact gccacagctt tctgatgtct ccagcgactg gcaggacaaa
     3721 gggctggtgg cgtatgtcaa tgttgatcgc gacagcgcca gccgtctggg gatcagcatg
     3781 gcggatgtcg ataatgccct gtacagcgcg tttggtcagc gactgatttc cactatttat
     3841 actcaggcta accagtatcg cgtagtgctg gagcacaaca ccgaaattac cccgggcctc
     3901 gcgacgctgg ataccattcg cctgaccagt agcgacggcg gcgtggtgcc gttaagctca
     3961 attgccaaag ttgaacagcg ttttgcgccg ctttccatca accatctgga tcagttcccg
     4021 gtaacgacca tctcctttaa cgtgccggat aactattcgc tgggcgatgc ggtgcaggcg
     4081 attatggaca ccgaaaagac gctgaatctg ccggtggata tcaccacgca attccagggc
     4141 agcaccctcg ccttccagtc ggcgctgggc agcactgtct ggctgattgt cgcggcggtg
     4201 gtggcgatgt atatcgtgct cggcattctg tacgagagct ttattcaccc gatcaccatt
     4261 ctctcgacgc tacccaccgc aggggtcggc gcgctgctgg cattaatgat tgccggtagc
     4321 gaactggatg tgattgcgat tatcggcatt attttgctga tcggtattgt gaagaagaac
     4381 gccatcatga tgatcgactt cgcgctggct gctgagcgcg agcaaggcat gtcgccgcgc
     4441 gatgcaatct accaggcttg tctgttgcgt tttcgtccga tcctgatgac caccctggcg
     4501 gctctgcttg gcgcgctgcc gctgatgttg agtaccgggg tcggcgcgga actgcgtcgt
     4561 ccgttaggta tcggcatggt cggcggtctg attgtcagcc aggtgctgac gctgttcacc
     4621 acgccggtga tttatctgct gttcgaccgc ctggcattgt ggaccaaaag tcgctttgct
     4681 cgccatgaag aggaagcgta agtgaagttt tttgccctct tcatttaccg tccggtggcg
     4741 acgattttac tgtcggttgc cattaccctg tgcggcatac tgggcttccg tatgctgccg
     4801 gtcgccccgc tgccgcaggt cgattttccg gtgattatgg tcagcgcctc gctgcccggt
     4861 gcgtcaccag aaacaatggc gtcttccgtt gccacgccgc tggagcgctc acttgggcgc
     4921 attgccggag tcagtgaaat gacctccagc agttcgctcg gcagcacgcg tattattttg
     4981 cagtttgatt ttgaccggga tatcaacggc gcggcgcgcg atgtgcaggc ggcgatcaac
     5041 gctgcacaaa gtttgctgcc cagcgggatg cccagccgtc cgacctatcg caaagctaac
     5101 ccatcggatg cgccaattat gatcctcacg ctgacatccg atacttattc gcagggtaaa
     5161 ctgtacgatt tcgcctcgac gcagctggct ccgacgattt cgcaaatcga cggtgttggt
     5221 gatgtcgatg tcggcggcag ctcactgccc gccgtacgcg tcgggctgaa tccgcaggcg
     5281 ctgtttaatc agggcgtctc gctggacgac gtacgcactg ccatcagcaa tgccaacgtg
     5341 cgtaaaccgc agggggcgct ggaagatggc actcaccgct ggcagatcca gaccaatgat
     5401 gagctaaaaa ccgccgccga atatcagccg ctgattattc attacaacaa cggcggcgcg
     5461 gttcgtctgg gcgatgtggc gacagtgacc gactctgtac aggatgtacg taacgccggg
     5521 atgaccaatg ccaaaccggc tattttgctg atgatccgca agctgccgga agccaatatt
     5581 atccagacgg ttgacagcat ccgggcaaaa ttaccggagt tgcaggaaac cattccggcg
     5641 gcgattgatc tgcaaattgc tcaggatcgc tcccccacca ttcgcgcctc gctggaagaa
     5701 gtcgagcaaa cgctgattat ctcggtggcg ctggtgattc tggtggtgtt tttattcctg
     5761 cgctcgggtc gcgcaactat tattcccgcc gttgcggtgc cggtttcgct gattggtacg
     5821 tttgcggcga tgtacctgtg cggtttcagt ctcaataatc tttcgttaat ggcgctcacc
     5881 atcgctactg gtttcgtggt ggatgacgcc atcgtggtgc tggaaaacat tgcccgtcat
     5941 ctggaagcgg gaatgaaacc gttgcaagcc gcactgcaag gtactcgcga agtcggtttt
     6001 acggtgctgt cgatgagtct gtcactggtg gcggtgttcc tgccgctgct gttgatgggc
     6061 ggattgccgg gccgactgtt acgcgaattt gccgtgacgc tttctgtcgc cattggtata
     6121 tcgttgctgg tttctctgac attaacgcca atgatgtgtg gctggatgct gaaagccagc
     6181 aagccgcgcg agcaaaagcg actgcgtggt tttggtcgca tgttggtagc cctgcaacaa
     6241 ggctacggca agtcactgaa atgggtgctc aatcataccc gtctggtggg cgtggtgctg
     6301 cttggcacca ttgcgctgaa tatctggctg tatatctcga tcccgaaaac cttcttcccg
     6361 gagcaggaca ctggcgtgtt gatgggcggg attcaggcgg atcagagtat ttcgtttcag
     6421 gcgatgcgcg gtaagttgca ggatttcatg aaaattatcc gtgacgatcc ggcagtggat
     6481 aatgtcaccg gctttacagg cggttcgcga gtgaacagcg ggatgatgtt tatcaccctc
     6541 aagccacgcg acgaacgcag cgaaacggcg cagcaaatta tcgaccgtct gcgcgtaaaa
     6601 ctggcgaaag aaccgggggc gaatctgttc ctgatggcgg tacaggatat tcgcgttggt
     6661 gggcgtcagt cgaacgccag ctaccagtac acgttgttat ccgacgacct ggcggcactg
     6721 cgagaatggg agccgaaaat ccgcaaaaaa ctggcgacgt tgccggaact ggcggacgtg
     6781 aactccgatc agcaggataa cggcgcggag atgaatctgg tttacgaccg cgacaccatg
     6841 gcacggctgg gaatcgacgt acaagccgcc aacagtctgt taaataacgc cttcggtcag
     6901 cggcaaatct cgaccattta ccagccgatg aaccagtata aagtggtgat ggaagtggat
     6961 ccgcgctata cccaggacat cagtgcgctg gaaaaaatgt tcgttatcaa taacgaaggc
     7021 aaagcgatcc cgctgtcgta tttcgctaaa tggcaaccgg cgaatgcccc actatcggtg
     7081 aatcatcagg gattatcggc ggcctcgacc atttcgttta acctgccgac cggaaaatcg
     7141 ctctcggacg ccagtgcggc gatcgatcgc gcaatgaccc agcttggggt gccttcgacg
     7201 gtgcgcggca gttttgccgg cacggcgcag gtgttccagg agacgatgaa ctcgcaggtg
     7261 atcctgatta tcgccgccat cgccacggtg tatatcgtgc tgggtatcct ttacgagagt
     7321 tacgtacatc cgctgacgat tctctccacc ctgccctcgg cgggcgttgg agcgctgttg
     7381 gcgctggagc tgttcaatgc cccgttcagc ctaatcgccc tgatagggat catgctatta
     7441 atcggcatcg tgaagaaaaa cgccattatg atggtcgatt ttgcgcttga agcccaacgg
     7501 cacggtaacc tgacgccgca ggaagctatt ttccaggcct gtctgctgcg ttttcgcccg
     7561 attatgatga ccaccctggc ggcgctgttt ggtgcgctgc cgctggtatt gtcgggcggc
     7621 gacggctcgg agctgcggca acccctgggg atcaccattg tcggcggact ggtaatgagc
     7681 cagctcctta cgctgtatac cacgccggtg gtgtatctct ttttcgaccg tctgcggctg
     7741 cgtttttcgc gtaaacctaa acaaacggta accgagtaaa tgacagatct tcccgacagc
     7801 acccgttggc aattgtggat tgtggctttc ggcttcttta tgcagtcgct ggacaccacc
     7861 atcgtaaaca ccgcccttcc ctcaatggcg caaagcctcg gggaaagtcc gttgcatatg
     7921 cacatggtca ttgtctctta tgtgctgacc gtggcggtga tgctgcccgc cagcggctgg
     7981 ctggcggaca aagtcggcgt gcgcaatatt ttctttaccg ccatcgtgct gtttactctc
     8041 ggttcactgt tttgcgcgct ttccggcacg ctgaacgaac tgttgctggc acgcgcgtta
     8101 cagggcgttg gcggcgcgat gatggtgccg gtcggcagat tgacggtgat gaaaatcgta
     8161 ccgcgcgagc aatatatggc tgcgatgacc tttgtcacgt tacccggtca ggtcggtccg
     8221 ctgctcggtc cggcgctcgg cggtctgctg gtggagtacg cgtcgtggca ctggatcttt
     8281 ttgatcaaca ttccggtggg gattatcggt gcgatcgcca cattgctgtt aatgccgaac
     8341 tacaccatgc agacgtggcg ctttgatctc tccggatttt tattgctggc ggttggcatg
     8401 gcggtattaa cccctggcgc tggacggcag taaaggtaca ggtttatcgc cgctggcgat
     8461 tgctggcctg gtcgcagttg gcgtggtggc actggtgctt tatctgctgc acgccagaaa
     8521 taacaaccgt gccctgttca gtctgaaact gttccgtact cgtacctttt cgctgggcct
     8581 ggcggggagc tttgccggac gtattggcag tggcatgttg ccctttatga caccggtttt
     8641 cctgcaaatt ggcctcggtt tctcgccgtt tcatgccgga ctgatgatga tcccgatggt
     8701 gcttggcagc atgggaatga agcgaattgt ggtacaggtg gtgaatcgct ttggttatcg
     8761 tcgggtactg gtagcgacca cgctgggtct gtcgctggtc accctgttgt ttatgactac
     8821 cgccctgctg ggctggtact acgttttgcc gttcgtcctg tttttacaag ggatggtcaa
     8881 ctcgacgcgt ttctcctcca tgaacaccct gacgctgaaa gatctcccgg acaatctggc
     8941 gagcagcggc aacagcctgc tgtcgatgat tatgcaattg tcgatgagta tcggcgtcac
     9001 tatcgccggg ctgttgctgg gactttttgg ttcacagcat gtcagcgtcg acagcggcac
     9061 cacacaaacc gtctttatgt acacctggct tagcatggcg ttgatcatcg cccttccggc
     9121 gttcatcttt gccagagtgc cgaacgatac gcatcaaaat gtagctattt cgcggcgaaa
     9181 aaggagcgcg caatgaagtt ctggcgaccc ggtattaccg gcaaactgtt tctggcgatt
     9241 ttcgccacct gcattgtctt gctgatcagt atgcactggg cggtgcgtat cagttttgag
     9301 cgtggcttta ttgattacat caagcatggt aatgaacagc gattacaact gttaagtgat
     9361 gcgcttggcg agcagtatgc gcagcatggc aactggcgct tcctgcgcaa caatgatcgc
     9421 tttgtctttc agatcctgcg ttcatttgaa cacgataatt cggaagataa acccggcccg
     9481 ggtatgccac cgcacggctg gcgtacccag ttctgggtgg ttgatcaaaa caacaaagtg
     9541 ctggttggtc cgcgagcgcc gattccacct gacggtacac ggcgacccat tctggtcaac
     9601 ggtgcggaag ttggcgcggt gatcgcctcc cccgttgagc ggttaacgcg caatactgat
     9661 atcaatttcg ataaacaaca gcggcaaacc agctggttga ttgtcgccct ggcaacgtta
     9721 ctcgcggcac ttgccacttt tctgctggcg cgcggtttac tggcaccggt aaaacgactt
     9781 gtcgatggca cgcacaaact ggcggcgggc gatttcacta cccgcgtaac gcccaccagt
     9841 gaagatgaac tgggcaaact ggcgcaagac ttcaaccagc ttgccagcac actggagaaa
     9901 aaccagcaaa tgcggcgcga ttttatggcc gatatttctc acgaactgcg tacgccatta
     9961 gcggtgctgc gcggtgaact ggaagccatt caggatggcg tgcgtaaatt cacgccggag
    10021 acggtggcgt ctttacaggc ggaggtcggt acactgacca aactggttga cgatctccat
    10081 cagttgtcga tgtctgatga aggcgctctc gcctatcaaa aagcaccggt agatttgatc
    10141 ccactgctgg aagtggcggg cggcgcattt cgcgaacgat tcgccagtcg tggcctgaaa
    10201 ctgcaatttt ccctgccaga cagtattacc gtatttggcg atcgcgaccg tttaatgcag
    10261 ttattcaata atttacttga aaacagcctg cgctatactg acagcggcgg cagcctgaaa
    10321 atctctgccg agcagcacga caaaacggtg cgcctgacct ttgccgacag tgcgccaggt
    10381 gtcagtgacg agcagctaca aaaattattt gaacgttttt atcgcaccga aggttcccgc
    10441 aaccgcgcca gcggtggttc cgggctgggg ctggcgattt gcctgaacat tgttgaagca
    10501 cataatggcc gcattattgc tgcccattcg ccttttggcg gggtaagcat tacagtagag
    10561 ttaccgctgg aacgggattt acagagagaa gtatgaccga gttaccaatc gacgaaaaca
    10621 caccacgtat tttgatcgtg gaagatgaac cgaagctggg gcagttgctc attgattatc
    10681 tgcgtgctgc gagctatgcg ccgacgctta tcagccacgg cgatcaggta ctgccgtatg
    10741 tgcgccagac accaccggat ctgatcctgt tggatctgat gctccctggc accgatggct
    10801 tgacgctgtg ccgggaaatt cgtcgttttt ctgacattcc tatcgtgatg gtgacggcaa
    10861 aaatcgaaga gatcgaccgc ctgctcggac tggagattgg cgcagatgac tacatctgca
    10921 agccgtacag cccacgggaa gtggtagcgc gcgtcaaaac cattttgcgc cgttgcaaac
    10981 cgcagcgcga attgcagcaa caggatgccg aaagcccgtt gattatcgac gaaggtcgtt
    11041 ttcaggcttc atggcgcggt aaaatgcttg acctgacacc tgcggaattt cgtctgttga
    11101 aaacgctctc tcatgaacca ggaaaagtgt tctcccgcga gcaattgctc aatcatcttt
    11161 atgacgacta ccgcgtagta accgaccgca ccattgacag ccacattaaa aacctgcgcc
    11221 gcaagctgga atctctcgac gccgaacagt catttatccg cgccgtttac ggcgttggtt
    11281 accgctggga agccgacgcc tgccgcatcg tttagtttta gcgacatgac tttgttagcc
    11341 ggagatggcg ttcagaccag atccggcaac attatcccac gcatggtcag caaactgaca
    11401 ttatctctcc gccctggcag gcatcagaaa atcgctcata ctttaatcgg taaacagcac
    11461 ctttagatgc tgttttcgat acgcaatttc aatcaaggag tcattatggc tggttggttt
    11521 gaactcagta agagcagtga taatcagttc cggtttgtgc taaaagcggg caatggtgag
    11581 actatcctca ccagcgagct gtatacatca aaagcctctg cggaaaaggg catcgcgtca
    11641 gtgcgtagca acagcccgca agaagaacgc tatgagaaaa aaacggcaag taacggcaaa
    11701 ttctatttca atctgaaagc cgccaatcat caaattatcg gctccagcca gatgtacgcc
    11761 accgcgcaat ctcgtgaaac cggaattgcc tccgttaaag ccaatggcac aagccagacg
    11821 gtgaaagaca atacgtaatt acgatgccgg gcgtgggttg ttggcgtccg gctttatttt
    11881 ctctcatcac agagttacta tccctcaaga aattattaac catgaaatga gttttctcct
    11941 cataactgat aaggaaaatt atgctcaaag gattgcgtac attattttca cgcagggttt
    12001 tgtttaacgt cgaaatgaat aattctgttg actgtgaatt acttctcatc cagcaacaac
    12061 tccaggcatt gatagccgaa ccaggcaatt atttagcaca tgattgtgat ctcaacgata
    12121 ctctggttct ttgccagctt acccatcatc acaatggata tatacgagaa aaggccgtgc
    12181 agtatctggg gcacaaagag gatgttgcgg ctatagaaga attattactt gcagctaatg
    12241 actgggtaaa agaggttcgc cttgctgcaa ccatagcatt acgtcattta atgaaggata
    12301 agaatgcagc ggcatttgcc gttaatctac ccatgatacg taaccttctc caatgccagc
    12361 gttacgatca ccgtgcattt gtagacgaga tacttagata tttattgaca gaaaataacc
    12421 gcccacaatt aacgtattgg cttacttgcc ctgataaaaa gctctcccgc gcggtattac
    12481 aaacgctgat tgaatacggt tactttaatg atgaatcttc actgctttca atactcgata
    12541 aacccgatga gggtttgcga atgctggcga ccacccactg gctgcgtcaa caattaccat
    12601 taagcgaagc ggtattaact cgtctgttaa aagaccgctg gccgcgtatt cgacaagcaa
    12661 cgttatttag cctcactgac cgagcaatag aaatgcctcc ggcgttgcac agcacattac
    12721 tgctggataa caatatgttg atccgcctac gcgctaaaaa tatgcttcac gaagtcatgg
    12781 atgttccgca attctggcgt catgttgtca cttctgcgga atatactccc tcacagcgac
    12841 gggccgcttt atacgggctg gattccattc atgatcccaa tattttaaaa ctggcagaat
    12901 ggggattatc acagaatgta ttcccactgc gtttagccgc tatgcacatt cttgcaaaag
    12961 ctaatcctcg ttgtggcgtc aaagagacta ttctgaccac gctggctaac ccggacgccg
    13021 ccgggttgcg atttatggtt aacatctgtg tatggtgtcg cgttccgctc acgttcgagg
    13081 aaatacgtca gttgcaggaa aacgcgccgt cagttaaaca tgcttgcgca tattgtcggc
    13141 tgtatcataa cttgaacaaa tgggacggtt taattcttct tcttcaatcg caacacaagc
    13201 taactgaaga atttgcaggt aaacagctcg cgatatggca acgcaatttc aatctttcgg
    13261 gcattcaacc gaatgctctt cagcgtcagc aacttcaggc gctttttacc cgcaatccgg
    13321 aacttcacaa cagattatgg ggttacattc cttttaaata acttcgaatt atagacttac
    13381 gatgacaaat gtacctgctg acgagcggaa ccaaaacgaa acaatacgtg aagctttacg
    13441 cttgctacga gaaaaacttg ccgagggact acgcagtggc gaagcccaac cgtgggaaaa
    13501 ggatctgttt ttacataaag tgaaggccgg taacaaataa atcccccagt cttttccctc
    13561 acatttgcac tggagccaac cccgccgatt gcgctacaat gcccgccctt aaagtggggg
    13621 cactccccta accgcttcat caggtgaagc ggatctgacc tgtcatcaga acgagagaat
    13681 tatgtttaaa ccggaactcc tttccccggc gggaacgctg aaaaatatgc gttacgcttt
    13741 cgcttatggc gcagatgctg tttatgcggg ccagccgcgt tactccctgc gtgtgcgcaa
    13801 caacgaattc aaccacgaaa atcttcagct cggcatcaat gaagcccacg cgctggggaa
    13861 aaagttttat gtcgtggtca acattgcacc gcacaacgcc aagctgaaaa cctttatccg
    13921 tgacctgaaa ccggtggtgg aaatggggcc ggatgcgctg attatgtccg atccagggct
    13981 gattatgctg gtgcgtgagt acttccctga aatgccgatc cacctctcgg tgcaggctaa
    14041 cgccgtaaac tgggcgacgg tgaaattctg gcagcaaatg ggcctgaccc gcgtgatcct
    14101 ctctcgcgaa ctgtcgctgg aagagattga agagatccgc aatcaggtgc cggatatgga
    14161 gatcgagatc ttcgttcacg gtgcgctgtg catggcctac tccggtcgct gcctgctctc
    14221 tggctatatc aacaagcgcg atccgaacca gggtacctgc accaacgcct gccgctggga
    14281 gtacaacgtc caggaaggga aagaagatga cgttggcaac atcgtacaca agtacgagcc
    14341 gatcccggtg caaaatgttg agccgacgct aggtatcggc gcgccaaccg acaaagtgtt
    14401 tatgatcgaa gaagcccagc gtccgggcga gtatatgacc gcgtttgaag atgagcacgg
    14461 cacttacatc atgaactcga aagatctgcg cgccatcgcc catgtagaac gcctgaccaa
    14521 aatgggcgtg cattcgctga aaatcgaagg ccgtactaaa tctttctact attgcgcacg
    14581 caccgcacag gtttatcgta aagctatcga tgatgccgct gcgggcaaac cgttcgatac
    14641 cagcctgctg gaaactctgg aaggtctggc gcatcgtggc tataccgaag gtttcctgcg
    14701 tcgtcatact cacgacgatt atcagaacta cgaatacggt tattcagttt ctgaccgcca
    14761 gcagtttgtt ggtgagttta ccggtgagcg caagggggac ctcgcagcgg tagcggtgaa
    14821 aaataaattc tccgttggcg acagccttga gctgatgacg ccgcaaggca acattaactt
    14881 tacccttgag cacatggaaa acgccaaagg tgtagcgatg ccggtcgcac caggcgatgg
    14941 ttatactgtg tggctcccgg tcccgcagga tcttgaacta aattacgcgc tgctgatgcg
    15001 taatttctcc ggggaaacca cgcgtaaccc acacggtaag tgattaattt cgattatttt
    15061 tcccggatgg aaaattctta gaaaccgatc acatacagct gcatttatta aggttatcat
    15121 ccgtttcgct gaaaaacata acccataaaa tgctagctgt accaggaacc acctccttag
    15181 cctgtgtaat ctcccttaca cgggcttatt ttttatgcat aagccctatc cctggtcacc
    15241 gtcttccatt gaccacatcg atagaatctc ccttcatagc acgatgcctt tcacgtaacg
    15301 gcatcgtgct cgcacaggtt ccggctaagc acaaccagaa cgcgcatgtt tgatgcttac
    15361 caaaaaatat tctcactctc cacatttgaa tgtcagacga gcgacaccat gtaatcctac
    15421 accttctgtc ttcagctcaa ctatttgcat ttttttgccc tgagtaacac agaaatgagt
    15481 tgcatcattt tttactatat tttctgcacc agatattcta ctcctggcta aagaagcttc
    15541 ggcttcggtg tagtattggt tatcgagttt acgctgaata ttacttttat atgcaagacc
    15601 aaatttaccg atacttgtct catcattatg cacagcacaa ccagacataa taaaaatact
    15661 aattaatgat atagcagcta tctttttcat ctcacctttc cccattaaat accaacgaca
    15721 ctctctagtg tttaaatata ataatggctg atcattatat ttgaatagga ttataataaa
    15781 tgttctgtac aacatttcct acataagtag gacttacaga catgaaggcc ctttccaggt
    15841 aactccatgg ggctttaata tatttggaat agtatattta agatgccact gtttggttga
    15901 atattaggca tatgctcttt tttgaaattt atcggtggct accgttaata ttcgctgttc
    15961 ccattgcaag ctcctggtgg taaccactga atcctccata cttgaactga ctttttatcc
    16021 tccgactttc atcctgttct gactccacct tttcttttct gctctacact atctacagac
    16081 caatcataaa ggcacatacg atcatggcag aatttcccgc cagcttactg attcttaatg
    16141 gcaaaagtac tgacaatcta cccttgcgcg aagcaattat gctgttgcgt gaggaaggaa
    16201 tgacgatcca tgtgcgggtc acctgggaga aaggtgatgc cgcacgattt gtagaggagg
    16261 cccggaagtt gggcgtcgca acggtaattg ccggtggtgg cgatggcacc attaatgaag
    16321 tttctacggc gttgattcag tgtgaggggg atggcatacc cgcgctggga attttgccat
    16381 taggaaccgc caatgatttt gccaccagtg tagggattcc tgaggcactg gataaggcgc
    16441 tgaaactggc aattgccggt aacgccattg cgatagatat ggcgcaggtc aacaaacaaa
    16501 cctgttttat taatatggcg acaggcggat ttgggacgcg tattaccaca gaaacgccgg
    16561 aaaaattaaa agccgcgctg ggtggcgtct cttacatcat tcatggctta atgcgcatgg
    16621 atactctgca accggaccgt tgtgaaatcc gcggtgaaaa ctttcactgg caaggtgacg
    16681 ccctggtatt ggtattggta acgggcgtca ggccggtggc ggtcagcaat tgtgtccgaa
    16741 cgcgttaatt aacgatggct tgctgcaact gcgcattttt accggcgatg aaattcttcc
    16801 ggctctcgta tcaaccttaa aatctgacga agataacccg agtattatcg aaggcgcttc
    16861 gtcgtggttt gatatacaag ccccacacga aatcactttt aatcttgatg gcgaaccgtt
    16921 gagcggacaa aactttcata ttgaaatact tccggcggcg ttgcgttgtc gattaccacc
    16981 agattgtcca ttattgcgtt aatcaaacta ttctctcttg aaccagggag aatccgaaat
    17041 gccggatgcg gtgtaaatac cttatccggc atacagaaca atactacacc gtaattaatt
    17101 ttacccgtgt cttctgcaat gccagtttat ccacctctga tacagcatca tcggtaataa
    17161 taatgtcaat tttttcgatt ggcagtacct gattaaaacc gcgacggtta aatttcgatg
    17221 aatcgagaac ggcaatcact ttattagcgg ctgtgaccat cgcaccgcta acggaataac
    17281 cctcattaaa ggtcgtaata ccattaaccg catcaatacc atcagcaccg acaaacatta
    17341 aatcggcatt aatatcctgc agggaacgtt cagcaataga tccatgcata gatcgcgttt
    17401 tatggcggac cgtgccaccg cagacgacca gagtaatgtc tttattttcg gaaagggcaa
    17461 acgctgccgg gagactgttg gtaatcaccg tgatattttt agcggtcatt aatccttcgg
    17521 cgataagcat tgtggtactt ccgctgtcga gaataacggt catcccttca tggatcattt
    17581 tgactgccgc ctgcgctatt ctgttttttg gcgcgctggc gagctgaaat cgctctttaa
    17641 acccgacttc ctgggtctcg gtttcactat taccggacat tattttcgcc gcaccgccat
    17701 gaaagcgcgt aaccacgcct ttttgttcga gaaagcgcaa atcggcacgg attgtcgctt
    17761 ccgaggcagc aaatactccc gccagatcct gaacaagcac ggttccctgt tcattcacta
    17821 attggatgat cttattcctt cgctcgaatg aattcatcgt catttaccca tattcaattg
    17881 tggctagtgt aaacgaaggg ggaccattgg tgaatgatct gttttgcaca ataccgggcc
    17941 agcatcacgc tggcccgcgg tttcatggaa tgagcaacac tttgcccggc atggcattac
    18001 gagcgatgtc acgcaccgcc tgggtgaagc tttcaaagct tccacggtga gcgattaatg
    18061 gctccaggct taacttacgt tctgtcagca accggctcgc cgtttcccac tcctgccccg
    18121 gccaagggct ggaatagttc atccaactgc cgataaccgt cagctcttta cgcaatattt
    18181 tgccaaacgt tgccgatgtt aaatgcagat cctgatgcaa cgtgcccacc agcgccagtt
    18241 gggcatgagg accggcaatc tctaccgcca gttcgacagt ttgcggtacg ccagccgtct
    18301 cgaggataag ctgattaaaa cgcagttcgc gtaaaacgct ctgcatttgc ggcgcgctca
    18361 tttcgctact gttaaatgtt tgcatcgaac cgaaagattt tgccagtgcc agtttttctg
    18421 agctaatgtc gatagccgtc acactctttg ctcccagcgc gacagcgcac tgaatagcca
    18481 gcaggccaat ggttccggca ccaataataa taacgttttt attctcacaa ccttgcgcta
    18541 aatgaaaagc atgcagacca atggtaatcg gctcaataaa agccccatcc tcaataggca
    18601 tatccgtggg tagagcaaag acattttttc gcttaacgac aatatattca gcaaatccac
    18661 catcacgccg cgagccaata aaatcatatt ttgcgcactg ggaataaaac cctttcagac
    18721 actctggaca agtaaaacag ggtaataacg gcacacaggc aaccgcatcg ccagggtgta
    18781 aatcatcaac accggatccc accgcatcaa tatagccgct aaattcatgg cctaacgtta
    18841 ttggataata atgtgcacca tttttaaata tcctgggtaa atcggaacca cataagcccg
    18901 agctggcaat ttttacccgc acctcatcct gatgtttaat ttcaggaatg acgctttctg
    18961 caacgcgcac gataccatca gtatcattca ccactgattt cataaaaact cctgattgtt
    19021 aagggggata aactccccct cagttaaaaa ttattctgcg agaacggctt tctcttgttt
    19081 aataaaacca cgcgctctac gccaggtaat gaaaataccg gtcagataaa ttgcgccgat
    19141 aataatgaaa ccgggaatat tttgcgggga gaaaacctga atcagtaacc aggtaatggg
    19201 agaaccgccc tgatccattg aagccaccat acccccggct tttaacgccc cagcattagc
    19261 cgccagttgg gtgtgcaaac caatagtttg cgtcgcgatc cacagagtga tgctcatgat
    19321 gatgacaccc gagattaagg tgcggaacag atttccacga tgcacggcga ctgccatcgc
    19381 cacaaagaag ccgatggtgg caagatcgcc aaacggcagt acctgattac ccggaacaca
    19441 aacagcaatt aaaatggtga gcgggataaa aatcaggctt accgatacca ccgccgtatg
    19501 ccccagcagt aatgcgggat ccaagccaat caggaactcc tgaccgccga acttcgcctg
    19561 taaacgacta cgggcctgct tagcgatggg cgttaaacca tccatgatgg gtttaatcac
    19621 ccgtggcatt agcagcatca ctgccgccgt ttttaccgcc agctgcaata cacctttgac
    19681 atcgtaaccc gcgaggatgc cgataatcag ccccatcaca aaacccacgg tgacaggttc
    19741 gccaaaaggg ccaaatttgc gctgaatatc atcggcgcta aatttaattc ggttaacgcc
    19801 tgggattttc tcgatgatag catcgaccag caccgcaatc ggccccatat acgccgacgt
    19861 accgtgcgga atagcaatac cttccagctc aaagaaattt cgggtatcgc gggcaaacca
    19921 gtcgccgagc ttataaacaa acgccgcgtg aattaccaca cccgccatcc ctatcatcca
    19981 tgaaccggtt gccagatgca gcaacgcgcc ggtgaaagtc atatgccaga tatcaatatt
    20041 taccacccgc gtcatacggg tcagtaacat cgccacgtta accagaatag caatcggaat
    20101 cgccaccagc gcaatttgcg acgcccaggt cattggtgaa gagcccggcc agccgacatc
    20161 gaccacatgc agattcaggt cgaaattttc cgccatcgct ttcgccgccg gaccaatgga
    20221 atccagcatt aagccaatca caaggccaat gccaacaaag ccaatcccta tatgaagacc
    20281 cgctttaaag caatcgcctg ccttcatgcc taatatttta gaaaaaataa tgatgacaat
    20341 cggcagcatc accgtagggc cgaggtcgag aatataacgc atgacttctg aaaacatagg
    20401 tcacccctgt aagatagtca gaattttatt ttgtaatgct tcgataccga caccagaaac
    20461 aaaaggcatg ccgtgaacta acggaatatc gccaaaacta cgatccaccc tggcagtagt
    20521 gcatatcaaa tgcacgccat ccatataggt ttctatttca ttaacccgac actggattaa
    20581 ttcaacagga atattatgat tctgacacaa ttctttaatt tcttccgccg ccatcgtaga
    20641 ggtcgcaacc gcgcctccgc aagcgacaat aatcttgcgt ttcataaata gtccttttta
    20701 ttgttacaga gggatttatt cgtctgaatc taaaacatac tttgtgaagt attcctttaa
    20761 ctgggtttca ggaagagtga ttagtgtctc gacgatatcg ggctgttgta acttgccaaa
    20821 taaacagcgt aaaagtttca attgctgctg cggattttcc acaatcaacg caataaccaa
    20881 cgatacctcc acgtcgttat catcatccgc ttgctgaaaa tgaactttat ttgttggcct
    20941 taacagataa atggctgacg acttagcatg aatcgcctca caatgcggta ttgcaatggc
    21001 gtgctgctca agcattatcc cggtagggaa ttctgcttct ctggcaatta atgcctgtgg
    21061 ccaggtatca tgaaccacac ctttggcgag catctcatta ccgatatggg ttaaaacttc
    21121 gctacgatcg acaaaagaaa ttccgctacg aacaaacagg ttagtcatat accgtcctta
    21181 ttccgcacag ccgtagcgat aggcgcgcaa aacatcataa attttatcca taatcagctg
    21241 atgcggtatt gctgataatt ccccggactg aatgcgttca aattgtttgg gaagatactg
    21301 actaatcatg cccagtggga tgtccacgcc ttcaagattc accatcatcg tttcgacgct
    21361 atttttaatc cgactatgcg gccagtaata acgaatacga tccgacaggc tgtaacgaat
    21421 atccagtaat gaatcgttaa aacccgtacg ataatatttt ttccagtatt gcggttcgtc
    21481 gagcatcact tcttcaatta ccgccaggca accgctgcga ttttcagggg cgataagttc
    21541 ctgctcaatt tgtgccagtg caaatatcgc ctcgcgtaaa gcaaaggtta atgcgggacc
    21601 gactttcaat attgcaaagt gatcgcggac taattcccaa taagccgtcc gggtctggta
    21661 atcggtagaa tgtgcttcat aaaccattcg ggtgttttct atccattgcg ccagcggctg
    21721 cgcttcctgc ggctgataat ggataatatt gctgtgatca aattccacgc ccggctgcac
    21781 cacgatggca atcacgcgtg ttaacgcctc tgtcagccca cggacaataa aggccttttg
    21841 atgcgtacgt aaagtattgg cggcatcttc aacatgggtg atgtgtactg actgaatggc
    21901 gctggcctca ccgcccggaa ccggaacttc ggtgccaatg acatagctca gttgctcacg
    21961 ctggcaatct gtcgccacac tttccgcagc aaagcaaagc acagcagctc gttccgcaac
    22021 cgtttctggt gctaacggta tgggatcccc cgcgcaggac attgacgcat caagatgaat
    22081 tttactgaag ccggcacgaa catattcctt taccagctcg acggattttt ccatcgccgc
    22141 atccgcattt tcttgctgcc agcagtttgg ccccagatga tcgccgccga gaataatgcg
    22201 ttcgcgtgca aacccaactt tatcggcaat cgtaaaaaca aattcgcgaa agtctgccgg
    22261 tgtcattccg gtataaccgc caaattgatt gacctggttt gacgttgctt caatcagcac
    22321 tttgcgcgtg ctgttgcgat caaatgccag cgccgcttcg ataaccaacg gatgggcaga
    22381 acagactgaa catatgccga tatgttcacc agctttatgc cgggcaatta acgttttcat
    22441 gttttttcct tattaaatgg caggtgcgtt atgccctgcc ctcgcagcca caatcggcaa
    22501 tcactttgct caccacatcg cgcattgcgg atttagccga ctgcaaataa tcccggggct
    22561 cggtcgcttc agggtgctcg gtcaggtaat tttttaacgc ctgcgagaag gcatttttca
    22621 gctccgttgc aacgttgatt ttgcatatcc ccagtttgat ggtttgctga atatccttag
    22681 tcgataaccc tgacgcgcca tgcagcacca gcggtaagtt cacccactgg cgaatgttct
    22741 ccagtctaga aaaatcaagc gccggtgcgc tggcatacat cccatgagcc gtgccgatgg
    22801 cgaccgccag ggaatcaatt ccggttgcct cggcaaattc acgcgcctga gcggggttgg
    22861 tataaaaagc atcggcttca ttgacttgca catcatcttc ctggccgcca agttgcccca
    22921 gctccgcttc gacgctgaca tcaaagcgat ggcaaaaatc caccacctct ttgacccgtg
    22981 aaatattttg cgcaaaaggc aaatgcgagg cgtcaatcat gactgagcgc acgccagaac
    23041 gaaccttctg agcgatatcg tcaaatttcg tgtgatggtc gagatgaatt gccagtggat
    23101 ggtgatattg cttcgccatc gcgctgacca gcgccaacag attttctgta ccagcatgag
    23161 taaatgtgcc aggcgttccg gcgatgatga ccggcgcatg caggttggca gcggtttcca
    23221 ccaccacttg catcgtttcg agattgtgaa tattgaatgc cggaaccgca taaccgccgc
    23281 gctgtgcgtt gttcagcatc tgctttgtcg ataccacgtg cattttcata tcctgtcgtt
    23341 tgttttcgtt ttcaaaatat aatgaaatta tttgttttta aatatcgaga taacgatcac
    23401 aaaaacgaca atatgaaaat tattcgagga gtgaaaggca aaaaaacggc ctcccgatag
    23461 ggaagccgta gcaaagtgcg cgtgttttta tgccggatgc ggtgtaaaca tacgtggcag
    23521 tgctatgtag gcatgataag acgcttccgc gtcgcatcag gcataggttg ccggatgcag
    23581 tgtaaacgcc ttatccgtcc tacggggtgg tgttgttcgt ataaggcgta tcaggcaata
    23641 gtaattttgc tatcgagata aacgtcctgc acggcgttaa tcagtttcac gccgtcagcc
    23701 atcgatttct tgaacgcctt acgtccaaga atcagcccca ttccgccagc gcgtttgttg
    23761 ataaccgcag tacgcactgc atcactgagg tcagtttcac cgcctgcagc accgccggag
    23821 tttatcaacc cagcccggcc catatagcag ttagctaact gataacgcac cagatcaatc
    23881 gggttttcgc tggttaactt gctgtacacg cgatcgtcgg tataaccgta attaatcgct
    23941 ttatagccgc cgttattttc cgccattttt tgtttgacga tatctgcgcc gatggttgcc
    24001 gccagatggt ttgcctgacc ggtcaggtcg gcggaaacat ggtaatcaac gccatctttc
    24061 ttaaaggcgg agttacgcaa ataggcccac agcacggtca ccatgcccag ctcatgcgca
    24121 cgttcaaaag ccgcagaaat ttcttcaatc tggcgacgtg actcttccga gccaaaatag
    24181 atagtcgcac caaccgccac cgcgcccatg ttgaaagcct gctccacgct ggcatacagc
    24241 gtttgatcgt aggtattcgg gtaacttagc gtctcgttgt gattaagttt gacgagaaat
    24301 ggaatgcgat gcgcatagcg ccgcgatacc gacgccaaca cgccgtaagt tgataccaca
    24361 cagttacagc ccgcttcgat cgccagttca acaatgtttt tcgggtcaaa gtagagcggg
    24421 ttagcagcaa atgaagctcc ggcagagtgc tcaacgccct ggtcaaccgg cagaatagaa
    24481 agatatcctg tgccagccag acgcccggtg ttgtacaacg tctgcatatt acgtaacacc
    24541 gctggcgggc gattattgtc aatcattacg cggtctacgt agtcatgtcc ggggagataa
    24601 agctggtcag aaggaattgt catacaacgg tgctgtaaaa ggttgtcggc gtctttgcca
    24661 agcaactgcg caatatctgt cattactatg ctcccgtaaa ttccgattgg atatcggcta
    24721 tggattgtcc tggcccgcct tttgcgggca atcataatcc tggtcgttac gggcgagttt
    24781 ttccatcttt tggatgtttt ttcagcgttt tctgttggct cgattcatca gaaaaaatgt
    24841 tagcgcggtc aagttttcac cgtaaaggca tttaaaaggt attattaagt ggtattgtca
    24901 tcgcgtacct tacattacct gtcatgaagg aattaaaaga tgaaaacaac agcaaagctg
    24961 tcgttcatga tgtttgttga atggtttatc tggggcgcgt ggtttgtgcc attgtggttg
    25021 tggttaagta aaagcggttt tagtgccgga gaaattggct ggtcgtatgc ctgtaccgcc
    25081 attgcggcga tcctgtcgcc aattctggtt ggctccatca ctgaccgctt tttctcggcg
    25141 caaaaagtgc tggcggtatt gatgttcgca ggcgcgctgc tgatgtattt cgctgcgcaa
    25201 cagaccactt ttgccgggtt ctttccgtta ctgctggctt actctctaac ctatatgccg
    25261 accattgcgc tgactaacag catcgctttt gccaacgtgc cggatgtgga gcgtgatttc
    25321 ccgcgcattc gtgtgatggg cactatcggc tggattgcct ccggtctggc atgtggtttc
    25381 ttgccgcaaa tactggggta tgccgatatc tcaccgacta acatcccgct gctgattacc
    25441 gccggaagtt ctgctctgct cggtgtgttt gcgtttttcc tgcccggcac gccaccaaaa
    25501 agcaccggca aaatggatat taaagtcatg ctcggcctgg atgcgctgat cctgctgcgc
    25561 gataaaaact tcctcgtctt tttcttctgt tcattcctgt ttgcgatgcc actggcgttc
    25621 tattacatct ttgccaacgg ttatctgacc gaagtcggca tgaaaaatgc caccggctgg
    25681 atgacgctcg gccagttctc tgaaatattc tttatgctgg cattaccgtt tttcactaaa
    25741 cgctttggta tcaaaaaggt attattgctt ggtctggtca ccgctgcgat ccgctatggc
    25801 ttctttattt acggtagtgc ggatgaatat ttcacctacg cgttactgtt cctcggtatt
    25861 ttgcttcacg gcgtaagtta cgatttttac tacgttaccg cttacatcta tgtcgataaa
    25921 aaagcccccg tgcatatgcg taccgccgcg caggggctga tcacgctctg ctgccagggc
    25981 ttcggcagtt tgctcggcta tcgtcttggc ggtgtgatga tggaaaagat gttcgcttat
    26041 caggaaccgg taaacggact gactttcaac tggtccggga tgtggacttt tggcgcggtg
    26101 atgattgcca ttatcgccgt gctgttcatg atttttttct gcgaatccga caacgaaatt
    26161 acggctatca aggtcgatga tcgcgatatt gcgttgacac aaggggaagt taaatgaaaa
    26221 cagaacgtat tctcggtgct ctttatgggc aggcgttagg ggatgcgatg gggatgccct
    26281 ccgagctttg gccacgcagc cgcgttaaag cacactttgg ctggattgac cgttttctgc
    26341 ctggaccaaa ggagaataac gcggcctgtt attttaaccg cgccgaattc accgacgata
    26401 cctcgatggc gctgtgtctg gcggatgcgt tgctggaacg taaaggcaag atcgatccgg
    26461 atctgattgg gcgtaatatc ctcgactggg cgctgcgttt cgacgccttc aacaaaaacg
    26521 tgctaggtcc gacctcgaag attgcgctta acgccattcg cgacggtaaa cccgttgctg
    26581 aactggaaaa caacggcgta accaacggcg cagcgatgcg cgtctcgcca ttaggttgtt
    26641 tgcttccggc gcgcgatgtt gattccttta ttgatgatgt ggcgctggcg tcgagcccga
    26701 cccataaatc cgatctggca gttgcaggtg cggtagtcat cgcatgggcg atttctcgtg
    26761 ctattgacgg agaaagctgg tcagcgattg ttgattcact gccttcaatt acgcgacatg
    26821 cccagcaaaa acgcaccacc acgttcagcg cctcactggc ggcgcggctg gagattgcgc
    26881 tgaaaattgt gcgcaatgcc gacggcaccg aatccgccag cgaacagctt taccaggtcg
    26941 ttggcgcagg taccagcact attgagtccg ttccgtgcgc cattgcgctg gttgaactgg
    27001 cacaaaccga cccgaaccgt tgcgccgtcc tctgcgctaa ccttggcggc gatacagaca
    27061 ccatcggtgc tatggcgacg gcaatctgcg gcgcgttgca tggcattaac gctatcgatc
    27121 ctgcgttaaa ggcggagctg gatgcggtaa atcagcttga tttcaaccgc tatgccacag
    27181 cgctggcgaa atatcgtcaa caacgggagg cggtatgagc ggcgctcgat tacacacgct
    27241 gctgcctgaa ttaaccacgc gtcagtcggt gatggtcgtc ggcgcggcgg tcattgacgt
    27301 gatcgccgac gcttatgccc tcccctggcg tgggtgcgat atcgaactga aacagcagag
    27361 cgttaacgtt ggcggctgcg cactgaatat tgccgtggcg ttaaagcgcc tcggcatcga
    27421 agcgggtaat gccttgccgc tcggtcaggg ggtatgggcg gagattattc gcaaccggat
    27481 ggcgaaagag gggttaatca gcctgatcga taacgccgaa ggcgataacg gctggtgtct
    27541 ggcgctggtt gagccggatg gcgaacgtac ttttatgtca ttcagcggtg tggaaaatca
    27601 gtggaatcgc cagtggctgg cgcgattaac cgttgcgcct ggcagcctgc tctatttttc
    27661 cggttatcaa ctggcctcgc cctgcggcga attgttagtg gaatggctgg aagagctgca
    27721 agacgtgacg ccgtttatcg attttggccc acgtattggc gatatcccgg acgcattact
    27781 ggcgcggatc atggcctgtc gacctttagt gtcactcaat cgtcaagagg ctgagattgc
    27841 cgccgaacgt tttgctttat ccgcagagat aacaacactt ggcaagcaat ggcaggagaa
    27901 atttgccgcg ccgttgatcg ttcgtctcga taaagaaggc gcatggtatt tcagcaacga
    27961 cgcttctggc tgcattccgg catttccaac gcaagttgtc gacaccattg gggcgggcga
    28021 cagtcatgcc ggtggcgtac ttgccgggct ggcctctggt ctgccactgg cggatgccgt
    28081 attactgggc aatgcagtgg cgtcatgggt tgtcgggcat cggggcggtg attgtgcgcc
    28141 aacgcgcgag gaactactcc tcgcacacaa aaacgtatag atcgctgcga cagtggctaa
    28201 tgctgtactc aataggccgt tgctgttggt caagcgccac ttgcttgatc accagcaccg
    28261 gtattttgct atctaactga atatgtgact gaaactcggc atccggcatc cgggcgctaa
    28321 cgcgggaacg cgtacgttgt gggtaaatgt gctggctgcg gaaatagtca taaagtgaaa
    28381 tcccgatggc atcaacatca tgaattaaat gcgccggaac ccacgattcc tcaatcgata
    28441 ccgcttcttc atcgacatag cgaatacgct taagcaaaaa gacatcactt cctgcttcga
    28501 ccgccagctg ctgcgcgact tcttcgggac atttcacgac acgcttgtta acccatagcg
    28561 tatcgggctt tttcccgcgc aataccacct gctgagaaaa acctcgcgct tctttcaacg
    28621 agtattcgaa gatgttgttg atctgcgtgc cgtaaccgcg cgaacgcgtc accacaccct
    28681 cttcttccag cgcctgcatc gccttgcgca ccgtaatgcg cgaaacgccg gttaactgac
    28741 ttaaatcacg ctcaccgggc aaaatattgc catgctccag caccccgctg cgcacggcat
    28801 tttttaccgt ttcggcaaac ttaatataaa gcggcgtgtt atccgccgct aaaatacgct
    28861 cgttcagttg ggcaatcagc tgggtatgcg cttgttccat ttgtcttgtt cctgccgggg
    28921 agtctggtgg gagtatatca ctgcttctta tttaaggcgt ttctttaatc ccatcaacga
    28981 atgcctgcaa ctcctccacc gtgccattaa atacattaaa atccaccgga ccattgatgc
    29041 catctacctg tccacggtcg gaatgctgcc agaagcgcca ggccatgccg tcattgtccg
    29101 gacgacgttg ataatagtga gccacccacc acggatattc attgaaatag cccgccagat
    29161 tggtgtgata aaaaacggct cctgagtaaa taatcggctt ttttcccgta cttttttcga
    29221 ccatttttag ccactgactt actcgtttgc gtaattcttt tgccgataat tttccccgtt
    29281 cttctacgtc cagtaccgca gggaaatcac cttgtgagaa atccaccgtt tgcagaaata
    29341 atcgtgcctg aaccggcgct gctaccgacg gggagaaata atgatacgcc ccgcgcagca
    29401 ggccattttc gcggcttagt tgccagttac gcgaaaaata cgggtccacc agcttttcgc
    29461 cttccgtcgc cttaataaaa gcaaactgta agcggatacc gttgtcgcgc atttttgcca
    29521 cccgctgcca gtcgatccgc tcctgccagc gagaaacatc tattccgtga atggtgtaac
    29581 tggcaggaat gcgaatagcg aaagatttaa ccgggcgata accgtagaaa tggatgtagt
    29641 ctgtaatctg aactgctgtc gaatagaaaa aattcacctt ctgacgcgga taaattgcaa
    29701 cgatggaaat tagcccaaga gcgcataata gagaggtgag tttttttcga ctggtaattc
    29761 ttagctgcat tggtttcatc cctgaatgtc agtgccaaag gctgacaata accaaagcag
    29821 ctatagtacg gtgctcacca ccaggcgtgg aagtggtgaa ccggaccaat accgtgacca
    29881 acttccagcg tgtcggcctg ggctaatgct gatgaaagcc agctttttgc ctcctgtacg
    29941 gtgtcagccc agtttgtatg gcgcgggcgt agtgcagcca acgccgcaga gagcgtacaa
    30001 ccagtgccgt gggtgttttt ggtcataatg cgcggtgcgg taaaccgttg ttcaccctcg
    30061 cgggtaaaca gccagtccgg gctttgctca tcatccagat gaccaccttt cattagcact
    30121 gcgccacagc ccatcgccaa cagcgatcgc ccttgttcca gcatttcctg ttcagtgcgc
    30181 gcgtgtggcg cgtcgagcaa ggcggcagct tcgggcaagt ttggcgttat taatgaaacc
    30241 tgtggcaata atcgactgcg cagcgtagca accgccgaag gtgaaagcag cgggtcgccg
    30301 ctttttgcca gcataacggt gtcgagtacc acgtattgga tctgataacg ttgcaaccgt
    30361 tctgccaccg cttcaacaat atcggtttcc gccaacatac cgattttagt ggtgtcgatt
    30421 cgcacatcgc tgaacaccga atcgagctgg gcggcgacaa aatcagactc aatgcgatac
    30481 accgactgta cgccacgggt attttgcgcc accagtgcag taataactga gcaaccataa
    30541 gcgccaagtg ccgagaaggt tttaagatcg gcctgaatcc ccgcaccacc actcggatca
    30601 gtaccggcaa tcgtcagagc gttaattcgt ttcatgcctg cacctcctgc gtcaattgcc
    30661 agagcgcatc aaggaaatgt ggaacaaaac tgcctggccc ctcgcttctg gcgactgcgc
    30721 gttctccggc ttgtttcatc cagtgacagg cagatgcgac attttccagc gtatcgcctg
    30781 gtaacgcaca gcaggcagcg acaaccgccg ataatgcaca gccagttcct accactttgg
    30841 tcattaacgg atcgccaccg tgaataccaa tgatacgatg tccatcggta acataatcca
    30901 tctcgccagt gaccacgacg attgcgccag tttcccgtgc cagtgtttgt gcagcgggta
    30961 tcgcgttagc tgcggcgtca gtggtatcca ctccccgtcc accattagca atgccagcta
    31021 atgccatgat ttccgaagca ttaccacgta tagcggttgg cttatgaggc agaagttcca
    31081 gacaaaaacg gcggcgataa tcgagtgcac caaccgctac tggatcaagc gtccagggtg
    31141 tttgagagct ttttgcttgc tcaacggcgg cacacatcga ctgtgcgcgt agctgcgtca
    31201 gcgtgccaac gttaatcagc aacgcactag caatagccgc aaactgactg gcctcttcgg
    31261 tttcgataac catcgctggc gatgcaccga gcgccagcaa ggtattggca gtaaaggttt
    31321 gcaccacatc gttggtcatg cagtgcacaa gaggggaatg ttggtgaaaa aggtgtaacg
    31381 cgtgcgcaga ttgcgctgaa ctctgcaggt cgacttgcat agtttgctcc tgccataacg
    31441 tgaagaagca atgacctggt ggtccgtgac ttccctacgc tggcattatc cagatcaggt
    31501 aatacgggta tttctcagcc ttcacaaaga agggcacccc gagtcattta aaacaaaatc
    31561 aaaagattgc gattaacgtc ccgttaatcc ctgttctgga tcatgccagc ggaaagccaa
    31621 agactcaacc ctaaaaaatc ctctgtgtcc cagtttgtgt ctcacgttgt ggcccacaga
    31681 taaatggcag gcacaaaaaa accgcccata aggcggctta agtaaattat tcagtcgtga
    31741 agatttaaat gaaatctatt ttctgcatac gctttcttca tgcagtcgaa gtgcttttgc
    31801 caattccaat tggaatgcaa aggaaagacg ggaacggctg atcttgatac cgtcaataat
    31861 gatgtatgta gggtaaacag tgaccatgcg gcccaagtat tggaagtgtt tagggtggtt
    31921 tactttatcg ttattcattg tgtgccatcc gtctgggtgg gggtaatccc ggcaacggat
    31981 gattgatcta aaatcgatca aaatcaataa cttaacagat caccaaatcc aggggggtgt
    32041 acattggcga gcctccctca gcctaaccta tacacgacca taaaataggg gcggattcct
    32101 tccagttggg tgggaaaata tctgggagtt tggatacagt agccaggcag ggtaaccaga
    32161 cccatagatg agaatgttta ttattcccaa atatccaggc gaggggcctg ctgtggctct
    32221 ctttacgcgc cgctgtggcg tcttctctcc tctttctata caatcccata gctaacccat
    32281 tgcgaggctt acagagcgtt acagagcgtc cgtgtgaata ttgcataaat gaaagtggtg
    32341 aaaggtccga tttggtcaac ttttagacaa ctatttaaca tatgcgcaac aggttagacc
    32401 tgtacccttt caataggtcc gcctcctggg cgctgtgtac gccccataac tgtggctctt
    32461 ctgtacccat ccgggagcca ttccacagag taaactgtaa aactgatctg cctgtgagta
    32521 acgccctttt cctgtggata acttccacgc actaacccca taaactcccc ttttgaggcg
    32581 tccgcctctt caggcccttt cttgtggcaa aaacacaaaa agggtttagg gcggtggcta
    32641 ccgcccctgt agatgggaat gagtcgcact cgaaagaggg attgagaacc aattctcaag
    32701 tgataatcga tctcatttgt gttcgaagtt ttccccagaa aaataatttt ggggttaagc
    32761 atgtaaaatg ctacacactt gcactttgta atgataatta attgaccata aaaacaaata
    32821 gttagaagcg ctgggggagt cccactagtt acacaattga ttgctttttg agctaaaact
    32881 gattctttta ccgggtatac aatccatttg atcgcccttt accacatatt taaacggatt
    32941 taaagccatt tatttagggg gttagcaaag tgttgattcc atggttacag ataacaaaaa
    33001 agcccgccgg gggttagccg ggggcctgtg gttgggggtg tcaaacgtgg ttagttcggc
    33061 ccgccctgca ttagcatgtt gaaagcctgc tgattattgc tctcaacttc agagcgtacc
    33121 agatccttaa cctatccatc ctgcactttc acattaacgt tcacgtttag cggctggttt
    33181 agccacgctg gcggcgtcat cagtggatta cctgccatat caactttaag ctgtggcgct
    33241 gtaatcgtcg gcgtaggagg tacataagtt ggattggagt aagagcttac ccaccctgtt
    33301 ttatctgctg gtttggcaaa gtctggatta gtcggaaggt ctggactatg gaggaaatcc
    33361 cacagtttac ccagcgggct atcttttttc agattgcccc cggcggtggt gtcctgtcca
    33421 tacatggcgt cgttagcgtc atgaccttat cccaggcata atccccacct accgaaccga
    33481 ccgcaatgct ccagccaaca ggaccgccag agagagccgc cgcgccgcct accttgccaa
    33541 ctttcggacc ccgacccggt ttgtttggct tgtctttacc ttccccacca gatccgccag
    33601 tagtagcggc ttcaatgcca ccaatagcgg cgatcccttt catgaccccc agtaatttgg
    33661 ttagtgggtt aagcatggtc aacaaccatt taaaggctac gcccaacttc cagatagacc
    33721 cggcgaacat agccaccccg gcggcgtatg ctgccatttc gccccaggct ttaagctgct
    33781 caccagtgat ccccatcttg ctggcgtaat actcaataat gcggaaggtc aggatcacag
    33841 tgtcatgcaa ctctgtaaac gcatctgtgg caccctcaac gattttcccg gcaatatgcc
    33901 cgaacatctc aaaggcccca ccagagccgt taacagcggc gctgatagcg tcgaaagcgc
    33961 tggttaattc gttgccgaag ccagaagcaa agaagatgtt catcgcgttc tgcatactgg
    34021 tttgcaggcg ctgccagctt gcccggttgg acttcatagc cttatccaga gcgccgccgt
    34081 tacgagctgc ggctttcatc tgtttagcca cttccgggag gatgtcctta gagaacagct
    34141 tcccttgttg catcaggtca aacagatcct tttctgtaag gttggttgtc cctttcatct
    34201 ggttgagagc cttaacgaac agacccacag cccccgggag agcttcggac aactggcctt
    34261 tgagttcttc actcattacc gttcctttag acatcatctg attcaaactt ttcaaagcgc
    34321 ggctggcttc atcggctgaa gcacctgtaa caaggcccca ttcactggca ccctcaaaga
    34381 tggatcgcat ctggtcttta gggagcttgt caccaacagc ggcggcaaac tgagtgtaat
    34441 cacgggaagt cttgaggaga tccagcccca aacggttgga ttgatcacgg agataatcaa
    34501 actctttagc ggccttatct gtggaaccgg tgatcgctgt cagaccagaa agcgcggatt
    34561 caaaatcctg tccggtggtc atgatcttgc cgctcagcgc cacagttgcg gcaatggtga
    34621 tcgccccgcc tgcaccctcg atcatgg
//
LOCUS       DADKRT010000021        34544 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.021, whole genome shotgun sequence.
ACCESSION   DADKRT010000021 DADKRT010000000
VERSION     DADKRT010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 34544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34544
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.021"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            235..718
                     /locus_tag="JQ356_000866"
                     /pseudo
     CDS             235..718
                     /locus_tag="JQ356_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-associated peptidase"
     gene            900..1323
                     /locus_tag="JQ356_000867"
                     /pseudo
     CDS             900..1323
                     /locus_tag="JQ356_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000368730.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YfbM family protein"
     gene            complement(1390..2847)
                     /gene="nuoN"
                     /locus_tag="JQ356_000868"
     CDS             complement(1390..2847)
                     /gene="nuoN"
                     /locus_tag="JQ356_000868"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HAY4621036.1"
                     /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK
                     DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGMMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYL
                     FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY
                     SAGGIVVLISALLVLVLGVWPQSLISIVRLAMPLM"
     gene            complement(2854..4383)
                     /gene="nuoM"
                     /locus_tag="JQ356_000869"
     CDS             complement(2854..4383)
                     /gene="nuoM"
                     /locus_tag="JQ356_000869"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HAY4621037.1"
                     /translation="MLLPWLILIPFIGGFLCWQTEHFDVKVPRWIALITMGLTLALSL
                     QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
                     LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG
                     VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
                     PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
                     QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
                     VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
                     QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
                     P"
     gene            complement(4547..6388)
                     /gene="nuoL"
                     /locus_tag="JQ356_000870"
     CDS             complement(4547..6388)
                     /gene="nuoL"
                     /locus_tag="JQ356_000870"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HAY4621038.1"
                     /translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
                     TAFIGVDFFANGEQAYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
                     PEILHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
                     LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYFCFLVGGAALSALPLV
                     TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
                     VTHSLPLIVLLILSTFVGALIVPPLQSVLPQTTELAHGSMLTLEITSGVVAVVGILLA
                     AWLWQGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
                     SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            complement(6385..6687)
                     /gene="nuoK"
                     /locus_tag="JQ356_000871"
     CDS             complement(6385..6687)
                     /gene="nuoK"
                     /locus_tag="JQ356_000871"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HAY4621039.1"
                     /translation="MIPLQHGLILSAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(6684..7238)
                     /gene="nuoJ"
                     /locus_tag="JQ356_000872"
     CDS             complement(6684..7238)
                     /gene="nuoJ"
                     /locus_tag="JQ356_000872"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HAY4621040.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
                     MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRKDDSAKRKTEEHA"
     gene            complement(7250..7792)
                     /gene="nuoI"
                     /locus_tag="JQ356_000873"
     CDS             complement(7250..7792)
                     /gene="nuoI"
                     /locus_tag="JQ356_000873"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HAY4621041.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(7807..8784)
                     /gene="nuoH"
                     /locus_tag="JQ356_000874"
     CDS             complement(7807..8784)
                     /gene="nuoH"
                     /locus_tag="JQ356_000874"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HAY4621042.1"
                     /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
                     VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ"
     gene            complement(8781..11507)
                     /gene="nuoG"
                     /locus_tag="JQ356_000875"
     CDS             complement(8781..11507)
                     /gene="nuoG"
                     /locus_tag="JQ356_000875"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HAY4621043.1"
                     /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
                     ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLE
                     VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
                     LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
                     NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
                     VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
     gene            complement(11560..12897)
                     /gene="nuoF"
                     /locus_tag="JQ356_000876"
     CDS             complement(11560..12897)
                     /gene="nuoF"
                     /locus_tag="JQ356_000876"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HAY4621044.1"
                     /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
                     LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(12894..13394)
                     /gene="nuoE"
                     /locus_tag="JQ356_000877"
     CDS             complement(12894..13394)
                     /gene="nuoE"
                     /locus_tag="JQ356_000877"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HAY4621045.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
                     QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
                     LLERYK"
     gene            complement(13397..15199)
                     /gene="nuoC"
                     /locus_tag="JQ356_000878"
     CDS             complement(13397..15199)
                     /gene="nuoC"
                     /locus_tag="JQ356_000878"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HAY4621046.1"
                     /translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
                     ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
                     PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
                     NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
                     SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
                     DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSY
                     AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(15293..15955)
                     /locus_tag="JQ356_000879"
     CDS             complement(15293..15955)
                     /locus_tag="JQ356_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017490251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HAY4621047.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(15971..16414)
                     /gene="nuoA"
                     /locus_tag="JQ356_000880"
     CDS             complement(15971..16414)
                     /gene="nuoA"
                     /locus_tag="JQ356_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HAY4621048.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(17045..17983)
                     /gene="lrhA"
                     /locus_tag="JQ356_000881"
     CDS             complement(17045..17983)
                     /gene="lrhA"
                     /locus_tag="JQ356_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HAY4621049.1"
                     /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
                     FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV
                     ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
                     AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
     gene            18902..20119
                     /locus_tag="JQ356_000882"
     CDS             18902..20119
                     /locus_tag="JQ356_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HAY4621050.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
                     EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
                     SKFARFLSGYHQL"
     gene            20203..20802
                     /gene="yfbR"
                     /locus_tag="JQ356_000883"
     CDS             20203..20802
                     /gene="yfbR"
                     /locus_tag="JQ356_000883"
                     /EC_number="3.1.3.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
                     /protein_id="HAY4621051.1"
                     /translation="MKQSHFFAHLSRLKLINRWPLMRNVLTENVSEHSLQVAMVAHAL
                     AAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ
                     KLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAK
                     TRLEATLEARRSQEMDYFMEVFVPSFHLSLDEISQDSPL"
     gene            complement(20861..22693)
                     /locus_tag="JQ356_000884"
     CDS             complement(20861..22693)
                     /locus_tag="JQ356_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HAY4621052.1"
                     /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
                     VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
                     AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGYHGFSFFSVTPVGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
                     DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
                     GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
                     SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
                     AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM
                     GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
                     LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
                     SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
     gene            complement(22780..23430)
                     /gene="hxpA"
                     /locus_tag="JQ356_000885"
     CDS             complement(22780..23430)
                     /gene="hxpA"
                     /locus_tag="JQ356_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HpxA"
                     /protein_id="HAY4621053.1"
                     /translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH
                     GKQAITSLRHFMAGKSEADIAAEFTCLEHIEATETEGITALPGAIALLNHLNKAGIPW
                     AIVTSGSMPVARARHKIAGLPAPKVFVTAELVKRGKPEPDAYLLGAQLLGLAPQECVV
                     AEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQLNGDVIIQ"
     gene            complement(23441..23935)
                     /locus_tag="JQ356_000886"
     CDS             complement(23441..23935)
                     /locus_tag="JQ356_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HAY4621054.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
                     RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR
                     YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACLRQYHLSANEINQ
                     IINA"
     gene            complement(24019..24474)
                     /locus_tag="JQ356_000887"
     CDS             complement(24019..24474)
                     /locus_tag="JQ356_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HAY4621055.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
                     RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
                     LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            24812..26014
                     /gene="ackA"
                     /locus_tag="JQ356_000888"
     CDS             24812..26014
                     /gene="ackA"
                     /locus_tag="JQ356_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HAY4621056.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
                     KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            26089..28233
                     /gene="pta"
                     /locus_tag="JQ356_000889"
     CDS             26089..28233
                     /gene="pta"
                     /locus_tag="JQ356_000889"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY4621057.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
                     EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG
                     GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
                     GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
                     LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
                     NTWQTSLSLQSFNQEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
                     RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
                     ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
                     LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
                     AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
                     LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
                     MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
     gene            28423..29943
                     /gene="yfcC"
                     /locus_tag="JQ356_000890"
     CDS             28423..29943
                     /gene="yfcC"
                     /locus_tag="JQ356_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HAY4621058.1"
                     /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTS
                     GSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD
                     VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVSRL
                     NGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI
                     SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH"
     gene            complement(29976..30518)
                     /gene="yfcD"
                     /locus_tag="JQ356_000891"
     CDS             complement(29976..30518)
                     /gene="yfcD"
                     /locus_tag="JQ356_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HAY4621059.1"
                     /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
                     HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
                     HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA
                     LALWMKRNAKNEAVETETAE"
     gene            complement(30576..31127)
                     /gene="yfcE"
                     /locus_tag="JQ356_000892"
     CDS             complement(30576..31127)
                     /gene="yfcE"
                     /locus_tag="JQ356_000892"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HAY4621060.1"
                     /translation="MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN
                     ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFL
                     THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGML
                     DNDVLSVIALNDQSIIAQVAINP"
     gene            complement(31183..31815)
                     /gene="yfcF"
                     /locus_tag="JQ356_000893"
     CDS             complement(31183..31815)
                     /gene="yfcF"
                     /locus_tag="JQ356_000893"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HAY4621061.1"
                     /translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE
                     HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA
                     RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASVAMAEHLLALGQPNLFGEW
                     CIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG"
     gene            31951..32598
                     /gene="yfcG"
                     /locus_tag="JQ356_000894"
     CDS             31951..32598
                     /gene="yfcG"
                     /locus_tag="JQ356_000894"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
                     /protein_id="HAY4621062.1"
                     /translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL
                     RISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLF
                     WQVGELGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS
                     IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS"
     gene            32655..33017
                     /gene="folX"
                     /locus_tag="JQ356_000895"
     CDS             32655..33017
                     /gene="folX"
                     /locus_tag="JQ356_000895"
                     /EC_number="5.1.99.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate 2'-epimerase"
                     /protein_id="HAY4621063.1"
                     /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
                     ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
                     LHALRYADSVSMTLSWQR"
     gene            33038..33931
                     /locus_tag="JQ356_000896"
     CDS             33038..33931
                     /locus_tag="JQ356_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family protein"
                     /protein_id="HAY4621064.1"
                     /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
                     VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS
                     DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
                     LRTGVVLAPDGGILGKMLPPFRLGLGGPIDSGRQYLAWIHIDDMVNGILWLLDNELRG
                     PFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRL
                     EEAGFAFRWYDLEEALADVVR"
     gene            complement(33979..>34544)
                     /locus_tag="JQ356_000897"
     CDS             complement(33979..>34544)
                     /locus_tag="JQ356_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY4621065.1"
                     /translation="GYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSA
                     FPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKA
                     LFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQE
                     MLDRGLDRELVMMVTRLSPDDLIAQSH"
BASE COUNT         8664 a         9393 c         8642 g         7845 t
ORIGIN      
        1 tgtatagatc taacaaccgt aataaaacaa atactcataa ctcattataa ataatgataa
       61 aataacgtct tttattgata atttatatat gggaaaaatt ccttttgtta tattgtttct
      121 gatttcactc cctctgatta tttttaccaa ccctgggtca ctgcattacc accaacgccc
      181 cgacacgtca gtcctgagca attagaaaaa acagttcgtt atcttacaca aactgtgcat
      241 ccacgtaatg ccgacaatat tgataatctg aataggtccg tagagtatat aaaagagttc
      301 tttgtcagta gcggtgccag agttaccgcg cagggcgtcc ccgattggct attacgactc
      361 tgcgcctggt agccaggatt acctttaccc gcaatgtcct ggctttatcc cgatcggggg
      421 gactttattg cctggtcggc agaatacagg atatcaacgc cgttcgtcag gtaaaaacgg
      481 cattgttatc atcccgggat ttatctgttt attctatgaa tgccccatgg tttattcccg
      541 gtattgattt ctctgaccac ctgaattatt ggcaacacga tattcccgcc gtaatgatta
      601 ctgacaccgc tttttatcgt aataaacaat accacttgcc cggtgataca gcagacagat
      661 tgaattatca gaaaatggct cagatggtgt tataaccttg ttacacaaca gtaaataata
      721 aaaatttctc gaggcgggtc cagaaacagc gacatgtaca ttttattttc cctcgtctgt
      781 tttaagatgc gaaacataaa attcaatgga ggaaaaataa atgggaatga ttggttattt
      841 tgcagaaatt gactcagaaa agattaacca atctgcttga gtctactgaa aaacctttga
      901 tggataatat acatgacacg ctttcaggat tacgccgact ggatattgat aaacgctggg
      961 attttttaca ctttgggctg acaggcaccc ctgcttttga tcccgcgaag aatgatccgc
     1021 tgagtcgtgc cgtgcttggt gaacacagcc tcgaagatgg catagatggc ttcctgggat
     1081 tgacctggaa tcaggaatta gccgcgacaa tcgaccgact ggaatcactg gatcgaagta
     1141 agctgcgtaa acagttttcc attaagcgac tatgaaatgg agatttatcc gggagtgacc
     1201 ttttcagaag agttagaggg gcaactcttt gcctcgatca tgcttgatat ggaaaagctg
     1261 attagcgcgt atcgacgtat gctgcgacaa gggaatcatg cgctgacggt tattgttggg
     1321 tgatggtgtc agagcgccaa aaaaaaccgc cgaacatgtc ggcggttttc tgacttacaa
     1381 actaacagat tacatcagcg gcattgctaa ccgcacaata ctaatcagcg attgtggcca
     1441 tacacccagc accagtacca acagtgcaga aatcagcacc acgataccgc ccgcgctgta
     1501 ctgccagttt gacggtgcat cgcgacccgg ttgttccggt gcgtgcaggt acaggctcac
     1561 cgccacgcgc aggtagtagt agaggccgat tgccgaaccg acaaccacgg cacccaccag
     1621 ccaccacaag tgtgcctgga caccgaccgc cagcacgtag aacttaccga taaagcccag
     1681 cgtcatcggg ataccggcca gagacagcat catcaccgtc atcactgccg cgaggatcgg
     1741 acgatgccag aacagaccgc ggtaagagaa cagggaatca gcatccgggc cacgatacgg
     1801 gctggacatc aggctgacca cgccgaacgc gccgaggctg ctgaacagat aaccggccag
     1861 gtaaacccct accgcttcca tcgacatctc gccggtttgc agcgcaatca gcgccaccag
     1921 cagatagccg aggtgagaga tagatgagta accgagcaga cgtttgatgt tggtctggct
     1981 caacgccatc aggttaccga agatgatgga ggcaaaggcg ataatcgcca gtactacgcg
     2041 aatcgcttcg ctgtcaccca ccggtgcata gaggaacaga cgcatcacca caccgaagat
     2101 agcgattttg ctcgccgtcg ccaggaaagt ggaaaccggc gcaggcgcgc cttggtatac
     2161 gtctggcgtc cacaggtgga acggcaccag agagagtttg aagccgaggc caacaatcat
     2221 catgccgaaa cctgccagca acagcggctc gttgagcata ccgtcaccga ggtttttacc
     2281 cagcgcgaca aacgacaggt cgccagactg cgcatacacc agcgccatac caaacagcag
     2341 gaaagaagac gctgcggcag aaaggatggt gtatttgata ctggcttcca gcgaacgttt
     2401 ctggcggaaa gcgtaaccga ccaggccaaa cagcggcaaa gagatcagtt caataccgag
     2461 gaacagagac gccagatggt ttgcattcgc cagcaggatc ccgcccagcg cggcaattaa
     2521 caccaacagg tagaactcat ccttgttgtc gttatagcct tcaagccacg ggtaggcgaa
     2581 agtacaggtg gcgaggctcg ccaacaatac cagcccggtg taaagcatgg cgaaaccatc
     2641 aacgcgcatc agcggcgtaa cgtccatagc gcccgcctgg ccaacaaacc agagcgaaac
     2701 cagcgccgcg ttaagcccaa taaccgagag cgtagcgttg aggaaatgat tgcgtcgcca
     2761 cgcaatggag agcatcacaa ccaccaccgt taagccgacg atcagcaacg gtagcagtgc
     2821 gatcaggttt tgtggagtta ttgtcatggc gatttacggc cttgtagtag taacggaatt
     2881 aacaaaccac tgctggatat tgccaatcgc ggagtgcgag gtatccagaa tcggctgcgg
     2941 atagaagccc agcagtacca gcagcaccac cagcaacagg atcataaaca gctcacgcag
     3001 cgacatccct ggcagttcct ggctggcaat ctggcttttc gctttaccga agtaagcgcg
     3061 atgcaacatc gccagcgaat aaacagatgc aaagaccagc ccaaaggtag agataacggt
     3121 aatcaccggg acaacctgga agctgccgaa cagaatcata aattcgccga cgaagttacc
     3181 ggtgccaggc atcccaagcg ttgccaccgc aaagaacagc gacaatgctg gcagccattt
     3241 catcttgctc cacagaccgc ccatcatgcg catgtcgcgg gtatggatac gttcataaag
     3301 ctgaccacaa agaataaaca gacccgccgc cgacaaaccg tgcgcaatca tctggattac
     3361 cgcgccctgg taggccaact ggctgccggt gtagatagca atcagcacga agcccatgtg
     3421 ggaaaccgag gtgtaggcga tcagacgttt gatatcggtc tgggcgaagg ccatccacgc
     3481 accgtagaag atgccgataa cacccagcca catagcaatt ggcgcgaact ctgccgacgc
     3541 gttcgggaac agcggcaggg agaaacgcag caaaccgtaa gcggcagttt tcagcaagat
     3601 ccccgcgaga tcaacggaac cggcggtcgg agcctgggag tgcgcatccg gcagccagcc
     3661 atgcagcgga accaccggca ttttgactgc gaaggcgatg aagaagccca gcattaacag
     3721 gtattccaca ccactggaca ttggcgtatt cagcagctct tcatagttga aggtccagac
     3781 gccggtcgca ttgtagtgaa caaaaaccag cgccaggatg gcaatcaaca tcaccaggcc
     3841 actcgcctgg gtgtaaatga agaacttggt tgccgccgtg atacgcgttt taccgtcaga
     3901 ggctttatgc ccccacagtg cgatcaggaa gtacatcggc accagcatca tttcccagaa
     3961 gaagaagaac aggaacatgt cgatggcaag gaacacgccg ataacgccgc ccaggatcca
     4021 catcaggttg aggtggaaga agccctgata tttttcgatc tctttccacg aacagagtac
     4081 cgccagcaca ccgagcagac cggtcagcac gaccatcagc agcgacagac cgtcaatggc
     4141 gagatgaata gagataccaa aacgcgggat ccacggcatg tcgaattcag actgccactg
     4201 cggaattccg gcggattgcg tcagtgaata accgccctgc aaccacagtt gcagcgacag
     4261 cgccagcgtc aatcccatgg tgatcagcgc gatccagcgt ggcaccttga cgtcaaagtg
     4321 ttcggtctgc cagcacagga agccgccaat aaagggaatt aatattagcc agggtagtaa
     4381 catggcgatc tttattcctt gtaaaagtcc cgtcaggacc ggattttcaa cgaattctca
     4441 cgacagaaaa ttctcttcgg actgggggta gtgtcggatg cgccgcgaag gcagcttatc
     4501 cgacctacgt tcttatatgc ccaggagcaa tcccacaatc cttaactcaa cgcagtacca
     4561 tcaacagtgc cagcaccacg accgcaccga tgctcatgga tgccacatac cagcgcagat
     4621 aaccgttctc gcttaacagc aggcctttac ctgcaaagcg ggaaagaacc gccggaatgt
     4681 tcatcattga gttcagcgga tcgcgtttca gcaaccaggc aatacccaga aacggcttga
     4741 cgaacacttt gtcgtacagc cagtcaaagc cccaggcgtt gtaccaccag gtgcccagca
     4801 gacggcccgg cgcactgttg gcaatggagg tcaccagagt acgtttaccc tgccacagcc
     4861 aggctgccag cagaatgccg accaccgcga ccacgccaga ggtaatttcc agggtcaaca
     4921 tgctgccgtg cgccagttcc gtcgtttgcg gaagcacgct ctgcagcggc ggtacaatca
     4981 gtgcgccaac gaaggtggaa aggatcagca gcacaatcag cggcaggctg tgagttaccc
     5041 ctttcacggc gtgagcgtga atttgttctt ttccgtggaa gacgatgaaa atcatacgga
     5101 aggtgtagag cgaggtcata aacgcaccga ccagacctgc caccatcaga ttgatatgac
     5161 cattcgccat cgcacccgcg aggatctcat ccttactgaa gaagcccgca gtgaccagcg
     5221 gtagtgccga cagtgctgcg ccgcccacca ggaagcagaa ataaaccagc ggaatagatt
     5281 tacgcagacc gcccatcttg aagatgttct gttcgtgatg gcaggccaga atgacggaac
     5341 cggatgccag gaacagcagc gctttaaaga acgcgtgagt catcaagtgg aaaatcgccg
     5401 catcccatgc ctgcacgcca agcgcgagga acatgtagcc aatctggctc atggtagagt
     5461 aagcgagaac acgtttgatg tcggtctgta ccagcgcggc aaaaccggcc agcagcagcg
     5521 taaccgcccc gacaatgccc accagatgca gaatttccgg cgtcatcagg aacaggccgt
     5581 gggtacgggc gatcaggtag acacccgcgg ttaccatggt tgcggcgtgg atcagcgcgg
     5641 agacaggcgt cgggcccgcc atcgcgtcgg caagccatgt ctgcaacggc aactgcgcag
     5701 atttaccgac cgcaccgccc agcagcatca gcgtcgccca catcagcatg ttattgccgt
     5761 cagcaaagtg cgctggtgcc agttccacca tttcgcggaa gttcagggtg cccagttcgt
     5821 tgtaaagaat gaacagcgcg aaagcgagga acacgtcacc cacacgggtc acgacgaacg
     5881 ctttcattgc cgctgcgcca ttcttcggat cggtgtaata gaacccgatc agcagatagg
     5941 agcacaggcc cacgccttcc cagccgaggt acatcagcag caggttatcg gcgagaacca
     6001 gaactaccat gctggcgatg aacaggttgg tgtaggcgaa gaagcgagag tagccctctt
     6061 caccgcgcat gtaccaggag gcgtacatgt gaataaggaa acccacacca gtgaccaccg
     6121 agagcatggt cagcgacagg ccgtccagca ccaggttaaa accgatgtta aagtcgccta
     6181 ccgacatcca cgtccacagc ggctggctgt atgcctgctc gccgttagcg aagaaatcaa
     6241 cgccgataaa ggcggttacc agcgccgcca ggcccacaga gccaacgccg acgatcgccg
     6301 aaacgttttc agaccagcgc ccacgggaga acgccagcag gacgaagcca atcaatggca
     6361 aaataatggt taaggcaagc atgttcatcc gcgcatctca cttactgaat cgatgttcag
     6421 gttctggcga cgacggtgaa gttgcagcag cagcgcaagg ccgatactcg cttctgccgc
     6481 cgcgaggctg atggcgagaa tgtacatcac ctgaccgtcg gtctgacccc agtagcttcc
     6541 ggcgaccaca aaggccagcg cggaggcgtt aatcatgatt tccagaccaa tcagcataaa
     6601 cagcagattg cgacggataa ccagaccggt taagccaaga acgaataaga ttgccgagag
     6661 gatcagtcca tgttgtaagg ggatcatgcg tgctcctccg tttttctttt cgcgctgtcg
     6721 tctttacgat tgctcagcac ttcacccgca cgctcttcac gaccgacgtg gaaggccaca
     6781 accagacccg cgagcagcag catagaagcc agttccaccg ccagtacgta aggcccgaac
     6841 agcgtaatac ccactgcttt agcactgatt ggcgtaccgt cgataccctg atcattaaca
     6901 ccaaggatgg cgtaaacaat caccaccagc atgatggccg acaaaattgc cggaccaatc
     6961 cacacctgcg gtttcagcca ctggcgttcc tgttcgattt ctgaaccgcc caggttgagc
     7021 atcatcacca cgaacacgaa cagcaccata atggcacccg cgtagacgat aatttccagc
     7081 gcaccggcga agtaagcgcc cagtgagaag aacaccccgg aaatcgccag cagcgaaata
     7141 atcaggtaca gcagtgcgtg taccggattg gtatgggtga tcactcgcaa ggtcgcaagt
     7201 atggctatca ggccacagat ataaaaagcg aactccattg cccctctcct tacggtaaca
     7261 ggctcttgac gtcgataggc ttggcttcgt tctctgcttc gcccttatct ttgccgtcga
     7321 ttgccatacc tgccatccgg tagaagttat attccgggta tttgcccgga ccggagatca
     7381 gcagatcctc tttttcgtaa accagatcct ggcgcttgta ttcccccatt tcgaaatccg
     7441 gggttaactg aatcgccgtg gtcggacagg cttcttcgca cagaccacag aaaatgcagc
     7501 gtgagaagtt gatgcggaaa aattccgggt accagcgacc gtctttggtt tctgcttttt
     7561 gcagcgagat acagccgacc gggcaggcta ccgcgcagag gttacaggct acgcaacgct
     7621 cttcgccgtc cgggtcgcgg gtcagaacga tacgaccacg ataacggggc ggcagataga
     7681 ccggctcttc cgggtacatt cgcgtttcgc gtttggcgaa cgcgtgcagg ccgatcatcc
     7741 agatactacg aacctgggtg ccgaaaccta ctaacaattc ttttaaggtc atggtcttat
     7801 tgccccttat tgcgcctgcc agagaatgac agccgccgtt accagcaagt tgatcagcgt
     7861 cagcggcagg cagattttcc agccgaagga cattacctgg tcataacgcg gacgcggtaa
     7921 cgacgcacga atcaaaatga acatcatcat aaagaacgcg gttttcaacg cgaaccagat
     7981 gaatggcggt aacaacgggc cttgccagcc accgaagaac agcgtcacca tcaatgcaga
     8041 gatggtcaca atcccgatgt actcacccac gaagaacaga ccgaacttca taccggaata
     8101 ttcaatgtgg taaccatccg ccagttcctg ctcggcttcc ggctggtcaa acgggtgacg
     8161 gtgacatacc gccacgcccg cgatggcaaa ggtaataaaa ccaaagaatt gcgggataac
     8221 gttccacaca tgcgcctggc tgttgacgat gtcggtcatg ttgaatgaac cggcctgcgc
     8281 caccacgccc atcagggaaa gcccgaggaa cacttcgtag ctcagggtct gcgcagaagc
     8341 acgcatcgca cccagcaacg agtatttgtt gttacttgac cagcccgcaa acagcaccgc
     8401 gtaaaccgcc agacctgcca tcatcaggaa gaacaaaatc ccgatgttca ggtcggcaac
     8461 cacccaaccc ggactgactg gcacaatcgc aaaggccagc agcagcgagg taaaggcaat
     8521 catcggtgcc agggtaaaga tgacgcgatc cgagaatttc gggatccagt cttctttaaa
     8581 gaacattttg atcatgtccg caaccagctg gagcgaaccg ccccagccaa cacggttagg
     8641 tccataacgg ttctggaaca gacccagcag gcgacgttcg ccaaagctca tgaatgcccc
     8701 acaggtgaca accaccagca ggatcaccac cgctttgagg atggtcagca ggatctcaat
     8761 cagttccggt gatatccaac tcattgttgt gcctccttga gatcctcaag atgcgcgcca
     8821 gccagcaccg gagcaatgcc ggacataccc atcggcaagc ccacctgccc tgccgtcagt
     8881 ccttcggcga tttcaaccgg cagcgtgacc gtgttgccat cgtaactaaa ggagacgcgt
     8941 gtacctgcgt tcacacccaa cttcgcggca tccgctgggt tgagtttgat gtacggctgc
     9001 ggcatacggc tctggaagac cggagcacgc tgtgacaatt catcgctgcc aaacaggtgg
     9061 taatacggcg caatacgcca tttcccgtcc tgcggctgga agcgtgccgg tacgctggtg
     9121 aagtaatcca gaccattctc gctggtttca aacagacgca cgcccggatc gccaaagcgc
     9181 agtttgccgc ccacttcgtc ctggaatttg ttccacgcct gcggggagtt ccagcccggt
     9241 gcccaggcaa acggcacttg cgaacggtgc gcggtcggct ggttgttacc ttccatcgag
     9301 aaggtgaaca tggtgtcaat atcctgcggc tgacgcggct catgaacgct gatattggcg
     9361 cgcatggcgg tacgaccgct gtaacggtgc ggttcacggg ccagtttctg cccacgaata
     9421 cggaatgtcg catccggcgc agcatctttg atacctgcca gttccgggat tttcgccaca
     9481 acagcgtcaa tcacatggtc gagctgcgtc cagtccactt cacggctcag cagggtgctg
     9541 tgcagcgagt gcagccagcg ccagctttcc agcatgacag ttttgctgtc gtaataagcc
     9601 ggatcgtaaa cctggaagaa acgttgggcg cgaccttcat tattaattac cgtaccgtcg
     9661 ctttcagcaa agctggcggc ggaaagtacc agatgggcgt tttccatgat cgctgtacgc
     9721 tgatggtcaa ccaccatcac cagcggtgct ttagccagcg cagcattcac gcgggtagca
     9781 gaagcgtgac gatgcagatc gttttccaac accaccaccg cgtcggcgcg tccggtttcc
     9841 agttcggtta acgcttcttc aagcgaaccg ccacccataa tgcccagccc catgctgttg
     9901 acggaacggg caatcatggt gataccgacg tcagcgccgc gacctttcag ggctttcgcg
     9961 acgttagccg ccgcctgaat cacctctaag ctaccggcgt tcgtcccgga gataatcaac
    10021 ggtttcttcg cacctgccag tgcctgcacg atgacgtcga ttttgctttg cagctcaggt
    10081 tcgataccgt caaccgctgg tgcagagtta tccagcgcat gggcgatggc aaaacctaaa
    10141 cgcgcctgat cttcaaccgg tgcgcggtaa gtccacgccg cgatatcatc cagacgggtg
    10201 tcatcaacgt tggtaacaaa cagcggatgc ttcgcacgtt gaccgatgtt aaggattgcc
    10261 gcaatctgcc agtcagccac tttctgtgct gccgccattt cgcgcgcttt acctttcacc
    10321 gcctgacgca ctgccagcgc gacgcgcgcg ccggtctggg taacgtcttc acccagcacc
    10381 agtaccgcat cgtaagattc gatttcgcgc agagccggag tataaatgcc gccttcacgc
    10441 agcactttca gcgccagttg cagacgttcc tgctcaccgt gagcgatacc ggtgtagaag
    10501 ttttcttcgc ccaccagttc acgcagtgca aagttgcttt ccacgctggc acgcggagaa
    10561 ccaataccga tcactttctt cgactgacgc agaatatctg ccgcgccctg cattgcctgt
    10621 tcggcgttga gggtaatgaa atcatcgcca cgacgctgta ctggctgacg cggacgatcc
    10681 ttcaggttga cgtaaccgta accgaaacga ccacggtcgc agaggaagta gtggtttacc
    10741 gtaccgttgt aacggttttc gatacgacgc agttcgccgt aacgttcacc ggggctgatg
    10801 ttacagccga tggaacattg ctggcagatg ctcggcgcaa actgcatatc ccatttacgg
    10861 ttgtaacgct cggagtgcgt tttgtcggta aatacgccgg tcgggcaaat ttcgaccagg
    10921 ttaccggaaa attcgctttc cagcgtgccg tcttccgggc gaccgaagta gacgttgtcg
    10981 tgcgcgccat aaacgcccag atctgtaccg tcagcgtaat ctttgtagta acgcacacag
    11041 cggtagcagg cgatgcagcg gttcatttcg tgagatatga atggccccaa atcctgatta
    11101 cggtgggtac gtttggtgaa acggtagcga cggaagctgt gtccggtcat cacggtcata
    11161 tcctgaagat ggcagttacc gccttcttca cataccggac agtcgtgcgg gtggttggtc
    11221 attaaccact cgaccacact ttcacggaac tgtttcgctt cttcgtcgtc aatggaaata
    11281 aaggtgccat cggaagccgg tgtcatacag gacatcacca ggcgaccacg cgtgtcttcc
    11341 gcgttttggt attgcttcac cgcacactgg cggcaagcac cgacgcttcc cagcgccgga
    11401 tgccagcaaa agtaaggaat atcaaggccc agagacagac aagcttccag caggttgtcc
    11461 gctccgttga cctcgtattc tttgccgtct acatgaattg tagccattag catgcttcca
    11521 gttttctcgg tcagggaccg agcgttaatc gaaattcggt taccagcgct ctttcagcag
    11581 gttcggctga atcccattaa tcaaatgggt attgctgaac ggctgtttga ttcccgcctc
    11641 aaattcttcg cggaaatatt tgatggcgct ctgtaacggc tccactgcac caggtgcgtg
    11701 ggcacagaaa gttttacccg ggcctaagaa tcgacacagt tgctcaagtg tttcaatatc
    11761 gcccggctgg ccttcgccac gctccagcgc acgcagaatt ttcacgctcc acggcagacc
    11821 gtcgcggcac ggcgtacacc agccgcagga ctcacgggcg aaaaactctt ccaggttacg
    11881 caccagcgac accatgttga tctcatggtc aaccgccatc gccagcgccg tacccagacg
    11941 gctgcccgct ttaccgatac tttcgaattc catcggcaga tcaaggtgcg cttcggtcag
    12001 gaagtcagtc cccgcgccgc ctggctgcca ggctttaaat ttcagaccat cacgcatacc
    12061 accggcgtaa tcttcgagga tctcgcgtgc ggtggtgccg aacggcagtt cccacagtcc
    12121 cggatttttc acccgaccgg agaagcccat cagcttggtg ccagcatctt tacttttcga
    12181 gatgttctga taccactcca cgccgttagc gaggatcgcc ggaacgttac acagggtttc
    12241 gacgttgttg acacaggtcg gtttgcccca tacgccggag gttgccggga aggggggttt
    12301 cgagcgtggg ttagcacgac gcccttctag ggagttgatt aacgctgttt cttccccgca
    12361 gatgtagcgc cctgccccgg tatggacgaa cagttcgaag tcgaaacctg ttcccataat
    12421 gtttttgcca agcaagcccg cttcagtggc ttcggcaatg gcgcggcgca gatttactgc
    12481 cgcttcgata tattcgccac gcaggaagat gtagccacgg taagctttca gcgcaaacgc
    12541 ggagatgagc ataccttcca ccagcaggtg cggcagttgc tccatcaaca ggcggtcttt
    12601 ataggtgccc ggctccattt catcggcgtt acacagcagg taacggatgt tcatggattc
    12661 gtctttcggc atcaggctcc acttcaggcc agtagaaaag cccgctccgc cgcgcccttt
    12721 cagaccagcg tcttttacct gattaacgat ttcgtccgga gacagcccgg tcagcgcctt
    12781 acgcgcccct tcgtaaccgt ttttgctgcg gtattcgtcc agccacactg gctgtttgtc
    12841 atcgcgcaga cgccaggtca gcggatgcgt ttcgggagta cggataatgt ttttcattta
    12901 taccgctcca gcagttcagg gatcgcttcc ggggtcagat gcgcgtgagt gtcctcatcg
    12961 atcatcatgt ttggcccttt atcacagttc cccaggcagc aagttggcag cagcgtaaag
    13021 cggccatcaa atgtcgtttg ccctggtttg atgttcagct ttttctcgag cgccgcctga
    13081 ataccctgat acccgttgat atgacagacc acgctgtcgc aataacggat cacatggcga
    13141 ccaaccggct ggcggaagat ctgactgtag aacgttgcca caccttcgac gtcgcttgcc
    13201 ggaataccca gcacatcggc gatcgcgtgg atcgcaccat ccggcaccca gccacgctgc
    13261 ttctgaacga ttttcagcgc ttcaatggac gccgcacgcg ggtcttcgta gtggtgcatc
    13321 tcgtgctcaa tcgcttcacg ctctgccgca ctcagctcaa aagcctcggt ttgtggttgt
    13381 tgattctcgt gcataattag cggtccacat ctgacataac aaaatcgata ctgcccagat
    13441 aaacaatcag gtcagacacc aggctgccgc ggatcgccgc cggaatttgc tgcaaatgcg
    13501 cataactcgg cgtgcggata cgagtgcgat aactcatggt gctaccgtcg ctggtcaggt
    13561 agtaactgtt gatccccttg gtcgcctcaa tcatctggaa agattcattg gcaggcatca
    13621 ccggccccca cgacacttgc aggaagtggg tgatcagggt ttcgatatgt tgcagcgtgc
    13681 gctctttcgg cggcggcgtg gtcagcgggt gatccgcttt gaacgggcct tccggcatgt
    13741 tgttgaggca ctgctcaaga atgcgcagac tctggcgcag ctcttccact ttcagcatta
    13801 cgcgggtgta gcagtcagaa acaccaccac caaccgggat ttcaaagtcg aagttttcat
    13861 agccagaata aggacgcgcc ttacgcacgt cgaagtcgat cccggtagca cgcaggcccg
    13921 cgccagtggt gccccactcc agcgcctctt tcgcgccata ggcggcaacg ccctgggaac
    13981 gacctttcag aatggtattt tgcagcgccg ctttctcgta agacgccaga cgtttcggca
    14041 tccagtcgag gaactcacgc agcaggcgat cccagccgcg cggcaggtcg tgcgctacgc
    14101 cgccaatacg gaaccacgcc gggtgcatac ggaaacccgt gatcgcttcc accagatcgt
    14161 aaattttctg acgatcggta aaggcgaaga acacgggcgt cattgcgccg acgtcctgaa
    14221 taaaggtcga gatgtacagc aggtggctgt tgatacggaa cagttcggag agcataacgc
    14281 gaatgacgtt aacgcgatcc ggcacggtga tcccggccag tttctctacc gccagcacgt
    14341 aaggcatttc gttaacgcag ccgccgaggt attcaatacg gtcggtatac ggaatgtagc
    14401 tgtgccagga ctggcgctcg cccattttct cagcaccacg gtggtggtag ccgatgtctg
    14461 gtacgcagtc gacaatctct tcgccgtcga gttgtaaaac gatacggaaa gccccgtgcg
    14521 ccgacgggtg gttcggaccg aggttgagga acatgaagtc ctcgttttcg gtgccgcgct
    14581 tcatccccca ctcttccggt ttgaaggtca gggcttccat ctccagatcc tgtttggctt
    14641 tggtcagctc aaacggcgag aattcggtag cgcgcgccgg gtaatcttta cgcagcgggt
    14701 gacctttcca ggtttgcggc atcatgatgc ggcgcaggtt cgggtgaccg tcgaaagtaa
    14761 tgccaaacag atcccaggtt tcacgctcat accagttagc gttcgggaac agtttggtga
    14821 aggtcggtac gtgcaggtcg ttttctgcca gcgccacctt cagcatgatg tcgcggttac
    14881 gatcgataga aatcagatgg tagaaaacgg aaaaatccgc ggcaggtaac ccttcgcggt
    14941 gtgtgcgcag acgttcgtcc atgccgtgta agtcaaacag catgacgtaa ggtttcggca
    15001 gtttctttaa gaaatcgcca acttccagta attgttcacg cttgatccac acaacgggaa
    15061 ccccggtgcg agtcgcctga acagtaaagg catccggccc aaaacggttg cgcagttcgc
    15121 caattaccgg atcatcaaga tgatcgcggg tctgccaggc gggttcttgc gcggttaagt
    15181 cggtcatatt gttcaccatt gcaaatggtc cgtggtgact gtcggcgcag taagcttcgc
    15241 gaaatagatt taggaataag cgaagaaaaa tccctttgcc gacaggcgca aattaaatct
    15301 cgtcaggtgt acgcaggttg gttacggcaa tgcgttcacc gcgcttgcgt tcgcgctctg
    15361 attgcatatt ggcgcgataa acgccctgat cgccaaccac ccaggagagc ggacgacgtt
    15421 ctttgccgat agattcctgc aacagcatca gtgcctgcat gtacgcttca ggacgcggcg
    15481 ggcagcccgg gatatacaca tcaaccggga tgaatttatc gacgccctgc acaacggaat
    15541 aaatatcgta cataccacca gagttggcac aggcacccat tgagataacc cattttggtt
    15601 ccagcatctg gtcatacaga cgctgaataa ccggtgccat tttggtaaag caggttcctg
    15661 caaccaccat caggtcagcc tgacgcggcg aagcacgcaa tacttctgcg ccaaaacgcg
    15721 ccacgtcatg caccgcggta aacgaagtca ccatctcaac gtaacagcag gaaagaccga
    15781 agttatacgg ccaaattgag tttttacgac cccagttaac catgtcattg agcttgccca
    15841 taaacacgtt tttgttaact tcttgctcca gagggtcggt tacgatctcc tgcttttgca
    15901 gggggtaacg gtcgttctca ccgttgggat ctatgcgggt gagcgtataa tccatcttaa
    15961 tgcctcgcgg ttagcgttga cgattagcga tactgttcgt ttccgggttc atacgctcgc
    16021 ggcgtgaacg cgcgggcgtc cagtccagcg cgccaatacg caccagataa accagacctg
    16081 ccagtaacac aaaaataaaa attgcagctt ccacaaagcc tacccagccg ctttcgcgga
    16141 tagaggttga ccatgcgaac agatacagcg cttcaacgtc gaagataacg aagaacatgg
    16201 ccaccagata aaacttggcg gacaggcgta agcgggcgga gccgaccgag tcgataccgg
    16261 attcaaacgg cacgtttttc gacctcgcgc gtgcgcgacc gcctaaaaac caaccaccta
    16321 ccagcattag gcaacacagg ccaatggcaa cgataagaaa gatagcgaat gcccagtgat
    16381 gagcgatgac ttcagtggat gttgacatac tcattgctta ctcatcaaaa gtagcgccag
    16441 attcactgct cttcacggca gatggacgcc acatcgattc atggggagga ataaaaaaaa
    16501 ccttacaatc actgtagaaa ttcttttata cagctaattg atgtggtctt ttactccttt
    16561 ctataacctt ttgtcaactt taacaaaagt ttcttcacat tagtttacat aatatcaaca
    16621 ccattagcat ttaatgccct ttcaccccag atccttgacg actccaggat aattagatgt
    16681 tgttgaatcg tgtccgttgt gaagcaatgg aaaaaatacg ggtctatttt gacaggaatt
    16741 tgtgtcgatt cctcccccca aaagagagta ttttcttgat ctgtgacacg cttttgtcat
    16801 tccataacaa aaacgcagca acaaatttac gtatttttta acatcattgt agcaggtgat
    16861 ttttttcagg cgattatttg tgcgttcggg acgtgaatct ctggtgatta aaaaatgaac
    16921 agttttgtac gttctgcact atgcgaggaa ggatttttac taaaaaaaag ccgctggggt
    16981 ttaaaacacc cccagcggct cgttttttac actattgtct caggaattat ctatcgtccg
    17041 tcgattactc gatatccctt tcaatcaaca atgaatcatc cccttccgga gcagacattg
    17101 ggctgtattg ccacggatta tggtagctct ccatcgcctg atagatcacc tgggccagct
    17161 cattattact ggacgggtca tagcacagca aatattcggt atcaggtagc ggcggtaagc
    17221 catctactcc actcagcaca cgcaggtccg ggctcatcat ctcaaccggc cttgccgtca
    17281 cgccaagacc ggctttcact gccgcacgaa cggccggaag cgtcgaggcg acataagcca
    17341 gtcgccatgg aatatctgct ttattaagcg ttgccagcac catatcgcga aacggacttg
    17401 gatcatccag caatacaaga gggatcggct cgcctttttg caatacgtat tccgctgcgc
    17461 agtaccagtg tgttggcgag gtacgcaggt tcaatgcctt aaacgctgaa ggacgatggg
    17521 tggttaccat caaatccact tcctgggatt ccagcatttc tgccatatag gcattacgtt
    17581 taacgcggac atccagcgct aatttcggat aaaccgaact cacgcgattt aacaggaaag
    17641 gtaagatcgt atcggcagat tcatctgaag caccgatagt taacacgccc tgaagattac
    17701 tgaacattaa tgatgagcag gcctcatcat taaaacgcag gattttcctg gcgtaaccaa
    17761 gaagttgaat gccatgttca gttaacagtt tgttgcgacc gtgacgagcg aacagttctt
    17821 tcccaacgag ttgttccaga cgctgcattt gctgacttac ggcggactga gtacgacaca
    17881 cagcggcagc tgcggcagca aaagtgttca gatcggcaac agcaacaaat gttctcagca
    17941 gatcgaggtc gaggttaatt atcggacgat ttgcacttat catatattat cacttactgg
    18001 cggctcatac tgagctggtt aatgctgtgc acacacaaac aagcaattcc atttgtaatg
    18061 tgcctccctg gcagtttcat ccggaacccg gacgaaagta aaaatgcata tgagttgcac
    18121 taaaaaagcg actcacattg ttccgttata atgcctgaag tagatcacag aatatatctt
    18181 cagggatcgc atatctatta agttactcac tcttttctat ttatgacatg cgcgtgtttg
    18241 tataaatgta aatgtgagtc cttgttccac tctcgtgcag catcgctggt catacgcgaa
    18301 cacgtacaaa cagcaatggt gaggcggcat caagagcagg gatccgtcat ttatgcgagc
    18361 attttacccc aaaaaccttt tatttataag ggccattgcg aatcatctga tgcaaagtta
    18421 tgttatgtta ggcaaagtaa tcttctatta ttaataagca catcaaaacc tttttgaata
    18481 ttaaataata attaattagc atcatcctca ttcattaatt ccgcttaaca atagtttcac
    18541 accttgcccc attacgacac ctcggaaatc atcacgctgt taaactctcc gtaatgcgga
    18601 aatatcatca tcgcgtttca ttagtgaatt cttaaatgag gcattttcac acaattatct
    18661 tacagataaa aaaaccagac ttacaattaa gaatcagaac aattcactat ataacattgc
    18721 atgtaaagca tatacacctc attattttgt catcattaag ttattaacag cacaatcgag
    18781 ccttcccctc tggcaaaatc ttattctgca gaccttcaaa acaccgtcct gggggagtac
    18841 attgttctaa gctgacttcc acggcaggga gtggcgataa cagcaaaaaa ggtcaagatt
    18901 catgtccccc attgaaaaat ccagcaaatt agagaatgtc tgttatgaca tccgtggtcc
    18961 ggtgctgaaa gaagcaaaac gcctggaaga agaaggtaac aaggtactga aactgaacat
    19021 cggcaaccca gccccgttcg gttttgacgc gccagatgaa atcctcgttg acgtgatacg
    19081 caacctgcct accgctcaag ggtattgcga ttccaaaggt ctttactccg cgcgtaaagc
    19141 catcatgcag cactaccagg ctcgtggcat gcgtgatgtt accgtggaag atatttacat
    19201 cggcaatggt gtatcggagc ttatcgttca ggcaatgcag gcattgctga acagcgggga
    19261 cgaaatgttg gttcctgcac cagattaccc actatggacc gcggcggttt cgctttccag
    19321 cggtaaagcg gtgcattatc tttgcgatga atcctctgac tggttcccgg acctcgatga
    19381 tattcgcgct aaaattacgc ctcgtacgcg tgggatcgtt attatcaacc caaataaccc
    19441 aaccggcgcg gtatattcca aagagctttt aatggagatt gtggagattg cacgtcagca
    19501 taatctcatt atcttcgccg atgaaattta tgacaaaatt ctttacgacg acgctgagca
    19561 tcactcaatt gcgccgctgg cacctgacct gctgaccatt acctttaacg gactgtcgaa
    19621 aacgtaccgc gttgcaggct tccgtcaggg gtggatggtg ttgaacgggc cgaaaaaaca
    19681 cgccaaaggc tacatcgaag gtctggaaat gctggcttca atgcgcctgt gtgctaacgt
    19741 tcctgcgcaa cacgccattc agaccgcgct gggtggttat cagagcatca gtgaatttat
    19801 tacccctggc ggtcgtcttt atgagcagcg taaccgcgcg tgggaactga tcaacgatat
    19861 tccgggcgtt tcctgcgtga aacctcgtgg tgcgctgtat atgttcccga aaatcgacgc
    19921 caaacgcttt aacattcacg acgatcagaa aatggtgctg gatttcctgt tgcaggaaaa
    19981 agttctgttg gtgcaaggga cggcattcaa ctggccgtgg ccggatcact tccgcattgt
    20041 cacgctaccg cgtgtcgatg atatcgagct gtctttgagc aagttcgcgc gtttcctttc
    20101 tggttatcat cagctgtaat cttaatttca ctgccggaga ttgcatccgg cagcgttatc
    20161 ccgccacaat gacctgatga tgtcatcata cgtaaggtca ctatgaaaca gagccatttt
    20221 tttgcccatc tctcccgcct gaaactcatt aaccgctggc cgctaatgcg caacgtgctg
    20281 acggaaaatg tgtccgaaca cagtttgcag gtagcgatgg tcgcccatgc gctggcagct
    20341 atcaaaaatc gaaaatttgg cggtaatgtc aacgccgaac gtatcgcttt actggcgatg
    20401 taccacgatg cctcagaagt gctcaccggc gatctcccta ctccggtgaa atacttcaat
    20461 tcgcaaatcg ctcaggagta caaggctatt gaaaaaatcg ctcagcaaaa actggtcgat
    20521 atggttccgg aagagctgcg ggatatcttt gcgccgttaa ttgacgagca tgcatatagc
    20581 gatgaagaaa aatcgctggt gaaacaggca gatgcactgt gtgcatatct gaaatgtctg
    20641 gaagaactcg cggccggaaa taatgaattc ttgctggcaa aaacgcgact ggaagcgacg
    20701 cttgaagcgc gtcgcagcca ggagatggac tacttcatgg aagtatttgt tcccagcttc
    20761 catctttcgc tcgatgagat tagccaggat tcaccgctgt aagcagccgg agtctgcgtc
    20821 gcatcaggca ataagcgccg gatgcgacat caggctcttg tcaaaacgga aacagcatcg
    20881 ggatcatcac cacacaaacc gccatcacga taatggtgaa cggtaccccc aacttcacaa
    20941 agtcactgaa gctgtaattt cccggaccta aaaccagtgt gttaacaggt gaagaaaccg
    21001 gtgtcataaa ggcggcggat gctgccatcg ccacgaccat cgcgaatgga taaggcgaca
    21061 cccccatcgt tttggcagca gccagcgcaa tcggagccat caacaccgcc gtcgcggtat
    21121 tagagataaa tagcccaata accgccgaca agacaaacaa acaccccagc atcatatgtg
    21181 gcccgtaacc accgccaatg tccatcagcc ctttcaccgc cagcgcgaca cctcccgttt
    21241 tctgtaatgc cacagcaaac ggcatcatcc caacgatcaa aataatgctc ggccagtgaa
    21301 tggatttata ggcgctttca gcatctatac agcggaattt ccccatcagc aggcaggcga
    21361 tgatagcggc aacaggatta ggaatttcat ctgtcagcat taacgccacc attagcacca
    21421 gacagaaaat ggcatggggt gcctggctgt gcgcgggcga tgcttcactc acctcttccg
    21481 gtaagttcag cgctacgaag tcgcggccct gtttggccag cataccgatc agtttccagt
    21541 tacccacaac caggatgata tcgcccagca gcagaggctc atccgccagc gaaccttcca
    21601 gcgccacgcc attgcgcttt agccccacca cattcagtcc gtagcgggta cgaaaaccaa
    21661 tttcgcgcac cgatttacca atcagttctg actcaggaat taatgaaatc tctgccatgc
    21721 ccacatcaag ggcctggtca gaaaaatact cgccgcgcag taccatcggc tccagcaatt
    21781 gctcactaca aaattgccgg agatcgacat cagccgcaga catatcaata agcaaaacgt
    21841 cacgcgcgcg aaattcagaa accccattaa cgttcacgat aacgcgacga aaacgccgcc
    21901 agcgttcaac accgatgacg ttagcgccat aacgctcacg taatttgaga tcatccagcc
    21961 gttgaccaat cattggcgat ccggggcgaa tagccagacg tcgcgcacgc ccggtcagtc
    22021 gatattcacg gataagatcg cgaaaggttc gacgcgtcca gccttcgcgc tgcggggtct
    22081 gggtatcccc tttcagcatg aaacgcatca ctaacatata caaaataccc agcaccagca
    22141 cgaccaggcc aacaggtgtt acgctaaaga aactgaagcc gtgatagcct tcacgcagca
    22201 attcactgtt gactaccagg ttcggcggcg tcgccaccag cgtcatcatg ccgctaatca
    22261 gcccggcaaa acttaacggc atcatcagac gtgacggcga agtttgcata cgcatggcaa
    22321 cgcttaacac cacgggaata aagatagcga caacgccggt tgaactcata aacgcgccaa
    22381 gccccgcgac ggtcagcatc aacaaaacca acattttgat ttcactgttg cccgccactt
    22441 tgaccagcca tgttcccatt acggtggcaa caccggtacg gaccaaacca tcgccaataa
    22501 taaacaaggc ggcaatcagg acaacgttag gatcagaaaa gccggaaaat acttcgggga
    22561 ccgtcagcgt tccgcttaat gcaaacgcga caataacaaa caaagcgacc gcatccatac
    22621 gcactctgcc cgtcgcaaac aagacgatgg caacggccag taatgaaaga acccaaatca
    22681 attcaccgtt cacaacttat ccttgttaat tgagggggat gacttgattc tgccataaaa
    22741 aagccccgac gagacggggc taaatcatga tcaggtgttt cactgaataa taacatcgcc
    22801 atttagctgt ttggtcacag taatttgctc cagactgtgg aggaccaaat cgacctcatt
    22861 caggcgcggg gtatctgccg gagcgttaac cgcaatgaca tggcaacccg ccgccaggcc
    22921 agaaagcacg ccagcgggag catcttccgc caccacacac tcctgcggcg caagccccag
    22981 cagctgcgca cctaacagat acgcatcagg ttctggtttt ccgcgcttca ctagctcagc
    23041 ggttacaaac acctttggtg cgggaagccc agctatttta tggcgcgctc gcgctaccgg
    23101 catggagcca gaagtcacaa tggcccacgg aatacctgct ttattcaaat gattgagtaa
    23161 ggcgattgcc cccggaagcg cggtaatacc ttcggtttcc gtggcctcga tgtgctccag
    23221 acacgtaaac tcggcggcaa tatcagcctc ggatttgccc gccataaaat ggcgcaaaga
    23281 ggtgatcgcc tgtttaccgt gaatgaaagc cagcacctct tccggcgcta acccatgacg
    23341 tctggcccag ttgctccacg cccgttctac cgcaggcagg gaatccacca gcgttccatc
    23401 aagatcaaac agaaaacctt tgcaccgcac gcgggcctcc tcaggcgttg ataatttgat
    23461 taatttcgtt ggcgctcaaa tggtactgac gcaggcaggc atgccacaca ttaagcatgc
    23521 gctgatattt ttcccacatt ggcgtctggg cgttaaaacc atgagtccca gcgtcaaaat
    23581 gggtatagcg cccttccaca ttaaccataa agcggacata accgaggtaa cgtgcttcag
    23641 tggcggcgtc aaagccgagg aaggtgacac gacgttcatc gatggattgc tggtcctgca
    23701 aattagacca ggaaacatgc aacgcatgat acatctccat aatgtcgatg atagtgcggc
    23761 aggtttcttc tttcagctcg ccaaactcgc gatccaattc acgcatctgt aatccgtaac
    23821 cacgctcaat aattgtttgc aggcgacggt aacgttcagc atttgccgga tcgagcatag
    23881 tcatcatctt gtactgatta gacaaaataa gacgttgcgc gttggtcatt tccattgttg
    23941 actcctgtat cactctacta cggtgaaaaa aaaagaaggc tgagtatgcc ttcttttata
    24001 tgcgtaatca ggggtcaatt acaaatcatc aaggaaagtt ttatccagtt gtttgaaggc
    24061 gcgcttaagc gtgtcagcta atgcctggta atcaggcttg ccttcaacgg gtgccaacac
    24121 ctgtccagac tcctgcaatt taccgcgaac ttcataaaac cagttgagga tagcaggggg
    24181 taatggcgtt acagaacgct tgcccagcca ccataatccc tgcatgggta aacttaaggc
    24241 gaacagcgca gtggcaactg ccggcccaag ctgaccgccc agggcaatct gccagcagag
    24301 agtaaatacg gcgatcggcg gcataaaacg gatcgcataa cgcgtcatct tgataacgcg
    24361 attttcgaca aagaccgggg caaggcgttt ttccagcggc cacgtctttg agtaatgctg
    24421 tccccggcga aacaagctaa aaaaattaac agaacgatta tccggcgttg acatgcttca
    24481 cctcaacttc acatataaag attcaaaaat ttgtgcaaat tcacaactca gcgggacaac
    24541 attcaaaaca ttttgtcttc catacccact atcaggtatc ctttagcagc ctgaaggcct
    24601 aagtagtaca tattcattga gtcgtcaaat tcatatacat tatgccattg gctgaaaatt
    24661 acgcaaaatg gcatagactc aagatatttc ttccatcatg caaaaaaaat ttgcagtgca
    24721 tgatgttaat cataaatgtc ggtgtcatca tgcgctacgc tctatggctc cctgacgttt
    24781 ttttagccac gtatcaatta taggtacttc catgtcgagt aagttagtac tggttctgaa
    24841 ctgcggtagt tcttcactga aatttgccat catcgatgca gtaaatggtg aagagtacct
    24901 ttctggttta gccgaatgtt tccacctgcc cgaagcacgt atcaaatgga aaatggacgg
    24961 caataaacag gaagcggctt taggtgcagg cgccgctcac agcgaagcgc tcaactttat
    25021 cgttaatact attctggcac aaaaaccaga actgtctgcg cagctgactg ctatcggtca
    25081 ccgtatcgta cacggcggcg aaaagtatac cagctccgta gtgatcgatg agtctgttat
    25141 tcagggtatc aaagatgcag cttcttttgc accgctacac aacccggctc acctgatcgg
    25201 tatcgaagaa gctctgaaat ctttcccaca gctgaaagac aaaaacgttg ctgtatttga
    25261 caccgcgttc caccagacta tgccggaaga gtcttacctc tacgccctgc cttacaacct
    25321 gtacaaagag cacggcatcc gtcgttacgg cgcgcacggc accagccact tctatgtaac
    25381 ccaggaagcg gcaaaaatgc tgaacaaacc ggtagaagaa ctgaacatca tcacctgcca
    25441 cctgggcaac ggtggttccg tttctgctat ccgcaacggt aaatgcgttg acacctctat
    25501 gggcctgacc ccgctggaag gtctggtcat gggtacccgt tctggtgata tcgatccggc
    25561 gatcatcttc cacctgcacg acaccctggg catgagcgtt gacgcaatca acaaactgct
    25621 gaccaaagag tctggcctgc tgggtctgac cgaagtgacc agcgactgcc gctatgttga
    25681 agacaactac gcgacgaaag aagacgcgaa gcgcgcaatg gacgtttact gccaccgcct
    25741 ggcgaaatac atcggtgcct acactgcgct gatggatggt cgtctggacg ctgttgtatt
    25801 cactggtggt atcggtgaaa atgccgcgat ggttcgtgaa ctgtctctgg gcaaactggg
    25861 cgtgctgggc tttgaagttg atcatgaacg caacctggct gcacgtttcg gcaaatctgg
    25921 tttcatcaac aaagaaggta cccgtcctgc ggtggttatc ccaaccaacg aagaactggt
    25981 tatcgcgcaa gacgcgagcc gcctgactgc ctgatttcac accgccagct cagctggcgg
    26041 tgctgttttg taacccgcca aatcggcggt aacgaaagag gataaaccgt gtcccgtatt
    26101 attatgctga tccctaccgg aaccagcgtc ggtctgacca gcgtcagcct tggcgtgatc
    26161 cgtgcaatgg aacgcaaagg cgttcgtctg agcgttttca aacctatcgc tcagccgcgt
    26221 accggtggcg atgcgcccga tcagactacg actatcgtgc gtgcgaactc ttccaccacg
    26281 acggccgctg aaccgctgaa aatgagctac gttgaaggtc tgctttccag caatcagaaa
    26341 gatgtgctga tggaagagat cgtcgcaaac taccacgcta acaccaaaga cgctgaagtc
    26401 gttctggttg aaggtctggt cccgacacgt aagcaccagt ttgcccagtc tctgaactac
    26461 gaaatcgcta aaacgctgaa tgcggaaatc gtcttcgtta tgtctcaggg cactgacacc
    26521 ccggaacagc tgaaagagcg tatcgaactg acccgcaaca gcttcggcgg tgccaaaaac
    26581 accaacatca ccggcgttat cgttaacaaa ctgaacgcac cggttgatga acagggtcgt
    26641 actcgcccgg atctgtccga gattttcgac gactcttcca aagctaaagt aaacaatgtt
    26701 gatccggcga agctgcaaga atccagcccg ctgccggttc tcggcgctgt gccgtggagc
    26761 tttgacctga tcgcgactcg tgcgatcgat atggctcgcc acctgaatgc gaccatcatc
    26821 aacgaaggcg acatcaatac tcgccgcgtt aaatccgtca ctttctgcgc acgcagcatt
    26881 ccgcacatgc tggagcactt ccgtgccggt tctctgctgg tgacttccgc agaccgtcct
    26941 gacgtgctgg tcgccgcttg cctggcagcc atgaacggcg tagaaatcgg tgccctgctg
    27001 ctgactggcg gctacgaaat ggacgcgcgc atttctaaac tgtgcgaacg tgctttcgct
    27061 accggcctgc cggtatttat ggtgaacacc aacacctggc agacctctct gagcctgcag
    27121 agcttcaacc aggaagttcc ggttgacgat cacgaacgta tcgagaaagt tcaggaatac
    27181 gttgctaact acatcaacgc tgactggatc gaatctctga ctgccacttc tgagcgcagc
    27241 cgtcgtctgt ctccgcctgc gttccgttat cagctgactg aacttgcgcg caaagcgggc
    27301 aaacgtatcg tactgccgga aggtgacgaa ccgcgtaccg ttaaagcagc cgctatctgt
    27361 gctgaacgtg gtatcgcaac ttgcgtactg ctgggtaatc cggcagagat caaccgtgtt
    27421 gcagcgtctc agggtgtaga actgggtgca gggattgaaa tcgttgatcc agaagtggtt
    27481 cgcgaaagct atgttggtcg tctggtcgaa ctgcgtaaga acaaaggcat gaccgaaacc
    27541 gttgcccgcg aacagctgga agacaacgtg gtgctcggta cgctgatgct ggaacaggat
    27601 gaagttgatg gtctggtttc cggtgctgtt cacactaccg caaacaccat ccgtccgccg
    27661 ctgcagctga tcaaaactgc accgggcagc tccctggtat cttccgtgtt cttcatgctg
    27721 ctgccggaac aggtttacgt ttacggtgac tgtgcgatca acccggatcc gaccgctgaa
    27781 cagctggcag aaatcgcgat tcagtccgct gattccgctg cggccttcgg tatcgaaccg
    27841 cgcgttgcta tgctctccta ctccaccggt acttctggtg caggtagcga cgtagaaaag
    27901 gttcgcgaag caactcgtct ggcgcaggaa aaacgtcctg acctgatgat cgacggtccg
    27961 ctgcagtacg acgctgcggt aatggctgac gttgcgaaat ccaaagcgcc gaactctccg
    28021 gttgcaggtc gcgctaccgt gtttatcttc ccggatctga acaccggtaa caccacctac
    28081 aaagcggtac agcgttctgc cgacctgatc tccatcgggc cgatgctgca gggtatgcgc
    28141 aagccggtta acgacctgtc ccgtggcgca ctggttgacg atatcgtcta caccatcgcg
    28201 ctgactgcga ttcagtctgc acagcagcag taatctcgtc atcatccgca gctttgcgct
    28261 gcggatatct gaaccggaaa taatcactat ttccggtttt ttattctctt aatctgcatt
    28321 aatcctttct gattatcttg cttaactgcg ctgcatcaat gaattgcgcc atttcacttt
    28381 gcatacttac cactttgttt tgtgcaaggg aatatttgcg ctatgtccgc aatcactgaa
    28441 tccaaaccaa caagaagatg ggcaatgccc gatacgttgg tgattatctt ttttgttgct
    28501 attttaacca gccttgccac ctgggtagtt ccggtgggga tgtttgacag tcaggaagtg
    28561 cagtatcagg ttgatggtca aacaaaaaca cgcaaagtcg tagatccaca ctcatttcgc
    28621 attctgacta acgaagcagg cgaacctgag tatcaccgcg tacagctgtt cacgacgggc
    28681 gatgaacgcc cgggcctgat gaacttcccg tttgaaggat taacctcagg atcgaaatac
    28741 gggacagctg ttggcatcat catgtttatg ctggtgattg gcggcgcgtt tggcattgtg
    28801 atgcgtacag gaaccattga taacggtatc ctggcgctta ttcgccatac ccgcgggaat
    28861 gaaattctct ttattcctgc gctgtttatt ctgttttcac ttggcggcgc ggtatttggt
    28921 atgggagaag aggccgtcgc ctttgccatt atcatcgcac cgctaatggt ccggctgggc
    28981 tatgacagta ttaccaccgt cctggtgacc tatattgcca cgcaaatcgg ttttgccagt
    29041 tcgtggatga acccgttttg tgtggtcgtt gctcagggga ttgccggcgt tccggtgctt
    29101 tctggctccg ggttgcgcat cgtggtgtgg gttatcgcca ctatgattgg cctgatcttt
    29161 accatggtgt acgcctcacg agtgaaaaag aatcctcttc tgtcacgcgt gcatgagtcc
    29221 gaccgcttct ttcgtgaaaa gcaggcggat gttgaacaac gtccgtttac ctttggtgac
    29281 tggctggtat tgattgtcct gaccgccgta atggtctggg tgatttgggg cgtgatcgtt
    29341 aatgcctggt ttattccaga aattgccagc cagttcttca ccatgggtct ggtgattggc
    29401 atcatcggcg ttgtttcccg ccttaacggc atgacggtta ataccatggc ttcatccttt
    29461 accgaagggg cgcgaatgat gatcgcccct gccctgctgg tgggtttcgc caaagggatt
    29521 ttgctgctgg tcggtaatgg tgaagcgggt gatgccagcg tgttaaatac catcctcaac
    29581 agcattgcca atgccattag cggtctggac aacgcggtcg cggcctggtt tatgttgctc
    29641 ttccaggcgg tatttaattt cttcgtgacg tccggttctg gtcaggcggc gttaaccatg
    29701 ccgttactgg caccgcttgg cgatctggtc ggtgttaacc gtcaggttac cgtgctggca
    29761 ttccagtttg gtgatggctt cagtcacatc atttacccaa cctcagcttc gttaatggca
    29821 actctcggtg tgtgcagggt ggacttccgt aactggctga aggtgggcgc gaccctactt
    29881 ggactgctgt ttattatgtc cagcgtcgta gtgatcggcg ctcagttgat gggctaccac
    29941 taaaaatgtt aagagccgca attgcggctc ttttttcatt ctgccgtttc agtctctacg
    30001 gcttcatttt tggcattgcg cttcatccac aacgccagcg ctttcagcga gtctggagtg
    30061 aactcatcgc agcgtgcggt gatttcttcc ggcgtcagcc agcaaacttc actgacttca
    30121 tcttcctgta gggcgaaggg accgtgagag acgcagctga acaacgcgcc ccagacacgg
    30181 caatttttat cttcgaaata gaactgcccg tgctcggcaa aggggacacc ggcaatgccc
    30241 aactcttctt ccgcttcgcg acgcgcggat tccagcagtt gctcatcggc ctgaaccaca
    30301 ccgcctgcgg tcgcatctaa catgccgggt aaaaagtctt ttgtctcggt acgacgctgg
    30361 accagaattt tgcccatgcc atcatgcacg acgatgtaag ttgcacgatg acgcagacac
    30421 tgtgcccgca tttgttcccg gctggcttgt gcaatgactt cgttctcttc attgacaata
    30481 tccacccatt cagtacttgc caaacgacgc tgttccatta tcaggaaacc ttctttttct
    30541 ggcgctctta cggcgcattt tgagttgtgg gtaaattacg gattaatcgc gacctgcgca
    30601 atgatacttt gatcattgag tgcgattaca ctaagtacgt cattatccag catgccataa
    30661 ctcgccggat taccgccttt cggaatactc accgagccgg ggttgaagtg gaaaatctcc
    30721 ccccgctgtt ctgccactgg cagatgggta tgaccgtaca ccagcacatc gttctggttt
    30781 aaagcaggta gattttccgg gccaaaaaga tgaccatgcg tcaaaaacag acgttgtttt
    30841 tccagtaata cctgttgcca cggcgcggtt atcgggaaat gcagcagcat ttgatccact
    30901 tcgctgtcgc agttgccgcg cacagcgata accttatgtg ccacttcatt aagccgttca
    30961 gcgactttgg ctggcgcgta accctccggt aaagcattac gcgggccgtg attcaacacg
    31021 tcgccaagga tcaccagcca ctgggcaccg ctttgggcaa acaactccag aacacgttcc
    31081 gtcgccggta acgacccatg aatgtccgat gcaaacatca gtttcatcac tcactcctcg
    31141 tcgaaaaaac gtaagctatg atactggatt ctgtcgttgc tatcagccag attgcttcgc
    31201 cgaaagtgca ataaaacgct ggacagacgc tcgctgccac tggaatgtcg cataatccac
    31261 caggcgttct ggcacctcat cgccatgtag taccaggcgg ttaatcatta gcgccagatc
    31321 agtatcagca atgcaccatt caccaaataa attcggctga cccagtgcta acaaatgttc
    31381 tgccatcgcg acactggctt ttccctcggc cgttagtggc gcttttttcg cccccgcaaa
    31441 gacaacatcc gtcggacgct cttcgcggat gggcatcaga tcgctgcgca gccaggcctg
    31501 aatctgtcgt gcacgcgcac gattttctaa atcaagcgga taaatacgtt cccaggtcgg
    31561 tggcgcaaat cgatcttcca gatactccgc aatggcagaa gattcactca actcaaaatc
    31621 atcgatttgt aataacggca cacggcgtgt ctgaccgtaa ccttgccacg tcggctgcaa
    31681 atgttcaccg ctgtcgaggt cgatggtctt gatatgaaac gacaggcctt tttcctgcaa
    31741 cgccacccaa gcggataaca cataagggga gaaaaagtgg gcatctgacc aaagcgtgat
    31801 agcgggttta ctcattatgt cctcggcaat aaaggaggct ggctatcaaa ctatagagcc
    31861 tttttgtcac tgtcacgtga cgaatactca cgtaagtcgc cgcgctttct atacttgtgg
    31921 tgttcagatg attaaacaac cggagctgca atgatcgatc tctatttcgc cccgacaccc
    31981 aatggtcaca aaattacgct gtttctcgaa gaagcagagc ttgattatcg cttgattaag
    32041 gtagacctgg ggaaaggcgg tcagtttcgt ccggaatttt tgcgcatttc gcccaacaac
    32101 aaaattccgg caattgttga tcattctcct gccgatggcg gcgaaccgct aagcctcttt
    32161 gaatctggtg ccattttgtt gtatctggct gagaaaacgg ggctcttttt gagtcatgaa
    32221 acgcgtgaac gcgccgccac attacagtgg ttattctggc aggtaggcga actggggccg
    32281 atgcttgggc aaaatcatca ttttaatcac gcagcccccc aaaccattcc ttacgctatt
    32341 gaacgttatc aggttgaaac tcagcgtctt taccatgtac taaacaagcg gctggaaaac
    32401 tcgccctggc tgggaggcga gaactacagc attgcggata ttgcctgctg gccgtgggtt
    32461 aatgcctgga ctcgccagcg aattgacctc gcaatgtatc cggcagtcaa gaactggcat
    32521 gagcggatcc gttcgcgccc tgccaccggg caggcactgc taaaagcaca actcggtgat
    32581 gagcgttcgg atagttaaca gaaacaggtt ctcgtgtatt atttcatcct aagtaaaaca
    32641 acggagaacc tgcaatggca caacctgccg ctattattcg tataaagaac cttcgtttac
    32701 gtacgtttat cggaattaag gaagaagaaa ttaacaaccg tcaggatatt gttatcaatg
    32761 tgacgatcca ctaccccgcc gataaagcgc gcactagcga agatatcaac gatgcgctga
    32821 attatcgcac cgtaacgaaa aacattattc agcatgtaga gaataaccgt ttctctttgt
    32881 tggaaaaatt aactcaggat gtgctcgata tcgcacgtga acatcactgg gtgacgtatg
    32941 ctgaagtgga gatcgataaa ctgcacgcgc tgcgctacgc cgattcggta tccatgacct
    33001 taagctggca gcgttaaccg ccatatcggg aggctgcatg aacatagtga tcaccggagg
    33061 gacgggatta attggtcgcc atttgattcc gcgtttgctg gagctgggcc atcaaatcac
    33121 ggtagtgacg cgtaacccac agaaagccag ttccgttctc ggccctcggg tgacgctatg
    33181 gcaagggcta gccgatcaaa gcaacctcaa cggcgttgat gcggtaatca acctggccgg
    33241 agaaccgatt gctgataaac gctggactca cgagcaaaaa gagcgtctct gccaaagccg
    33301 ctggaatatc acgcaaaaac tggtcgattt gattaatgcc agcgacacgc cgccgtcggt
    33361 actcatttcc ggctcggcaa cgggctatta tggcgactta ggtgaagtgg tggttaccga
    33421 agaggaaccg ccgcataacg aatttactca taaactctgc gcccgctggg aagagattgc
    33481 ctgccgggcg caaagtgaca aaacgcgagt gtgcctgctg cgaaccggcg tggtactggc
    33541 accggacggc ggtattctcg gtaaaatgct gccaccgttt cgtcttggcc tgggcgggcc
    33601 gattgactct ggtcggcagt atctggcctg gattcatatt gatgatatgg tcaacggtat
    33661 tctctggctg ctggataacg agctgcgcgg gccatttaat atggtttcgc cctacccggt
    33721 acgcaatgaa caatttgccc atgcgctcgg tcacgcgctg catcgcccgg ccattttgcg
    33781 cgtccccgcg accgccattc gactgttaat gggcgaatct tcagtactgg tattaggtgg
    33841 acaacgcgcg ctgcctaaac ggctggaaga agcgggtttt gcgtttcgct ggtacgattt
    33901 agaagaggcg ctggcggatg tcgttcgctg atgtggttta cagcaaacat ccgccagtta
    33961 actcccggtg ttacaggatt agtggctttg cgcgataaga tcgtctggtg aaagtcgggt
    34021 caccatcata actaactctc tgtctaaacc tctatccagc atctcctgag caatacgcag
    34081 ggcttcttcg tgtttgccct gcattgcgcc ttcttcacgt aatctgtcag caatggtcat
    34141 cagtttctcc ttttcttgtg gtgcgcgttc cgctatctca ccaataaatg cacgaaaacg
    34201 ctgggcatcc cctgtttgta atacgtaatt aaacagggct tttagctgtc tgtcattagt
    34261 gttccctgta actagcagcg aaacaatttg gtcgactaat cccaacagat cgcgctgacg
    34321 aatatgtttc tgaattaact ccaacagcgc cattttgcgg tgttgcataa tctcgtcatc
    34381 cggcaccacg gtaatatcca ccaacggaaa cgctgatgaa tatattttgc gggctatagc
    34441 aggctcggca aattcatcaa gccagcagag tgaataagga taaggacttc tgcaaccatg
    34501 ataaaacagc atcgggatca ccaatggaag ctctttatag cccg
//
LOCUS       DADKRT010000022        33689 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.022, whole genome shotgun sequence.
ACCESSION   DADKRT010000022 DADKRT010000000
VERSION     DADKRT010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 33689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33689
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.022"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1266..2045
                     /gene="ipaJ"
                     /locus_tag="JQ356_000898"
     CDS             1266..2045
                     /gene="ipaJ"
                     /locus_tag="JQ356_000898"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     protease IpaJ"
                     /protein_id="HAY4621066.1"
                     /translation="MSEQRKPCKRGCIHTGVMLYGVLLQGAIPREYMISHQTDVRVNE
                     NRVNEQGCFLARKQMYDNSCGAASLLCAAKELGVDKIPQYKGSMSEMTRKSSLDLDNR
                     CERDLYLITSGNYNPRIHKDNIADAGYSMPDKIVMATRLLGLNAYVVEESNIFSQVIS
                     FIYPDARDLLIGMGCNIVHQRDVLSSNQRVLEAVAVSFIGVPVGLHWVLCRPDGSYMD
                     PAVGENYSCFSTMELGARRSNSNFIGYTKIGISIVITNEAL"
     gene            complement(2989..3918)
                     /locus_tag="JQ356_000899"
     CDS             complement(2989..3918)
                     /locus_tag="JQ356_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Virulence regulon transcriptional activator
                     VirB"
                     /protein_id="HAY4621067.1"
                     /translation="MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTF
                     VNQKTNVRDQESLTEESLADIIKTIKLQQFFPVIGREIDGRIEILDGTRRRASAIYAG
                     ADLEVLYSKEYISTLDARKLANDIQTAKEHSIRELGIGLNFLKVSGMSYKDIAKKENL
                     SRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILK
                     EEIKDLDTNLPPDIYKKEILNIIKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTN
                     RTLIFTLSKINKTVQREIDEAIRDIISRHLSSS"
     gene            complement(4135..4371)
                     /locus_tag="JQ356_000900"
     CDS             complement(4135..4371)
                     /locus_tag="JQ356_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY4621068.1"
                     /translation="MIKEKILSIVAFCYGIAYSKLSEETKFIEDLSADSLSLIEMLDM
                     ISFEFNLRIDESALEHIITIGDLISVVKNSTKSI"
     gene            complement(4375..6276)
                     /gene="ipaA"
                     /locus_tag="JQ356_000901"
     CDS             complement(4375..6276)
                     /gene="ipaA"
                     /locus_tag="JQ356_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector invasin IpaA"
                     /protein_id="HAY4621069.1"
                     /translation="MHNVNNTQAPTFLYKATSPSSTEYSELKSKISDIHSSQTSLKTP
                     ASVSEKENFATSFNQKCLDFLFSSSGKEDVLRSIYSNSMNAYAKSEILEFSNVLYSLV
                     HQNDLNFENEKGLQKIVAQYSELIIKDKLSQDSAFGPWSAKNKKLHQLRQNIEHRLAL
                     LAQQHTSGEALSLGQKLLNTEVSSFIKNNILAELKLSNETVSSLKLDDLVDAQAKLAF
                     DSLRNQRKNTIDSKGFGIGKLSRDLNTVAVFPELLRKVLNDILEDIKDSHPIQDGLPT
                     PPEDMPDGGPTPGANEKTSQPVIHYHINNDNRTYDNRVFDNRVYDNSYHENPENDAQS
                     PTSQTNDLLSRNGNSLLNPQRALVQKVTSVLPHSISDAVQTFANNSALEKVFNHTPDN
                     SDGIGSDLLTTSSQERSTNNSLSRGHRPLNIQNSSTTPPLHPEGVTSSNDNSSDTTKS
                     SASLSHRVASQINKFNSNTDSKVLQTDFLSRNGDTYLTRETIFEASKKVTNSLSNLIS
                     LIGTKSGTQERELQEKSKDITKSTTEHRINNKLKVTDANTINYVTETNADTIDKNHAI
                     YEKAKEVSSALSKVLSKIDDTSAELLTDDISDLKNNNDITAENNNIYKAAKDVTTSLS
                     KVLKNINKD"
     gene            complement(6285..7283)
                     /gene="ipaD"
                     /locus_tag="JQ356_000902"
     CDS             complement(6285..7283)
                     /gene="ipaD"
                     /locus_tag="JQ356_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle tip complex
                     protein IpaD"
                     /protein_id="HAY4621070.1"
                     /translation="MNITTLTNSISTSSFSPNNTNGSSTETVNSDIKTTTSSHPVSSL
                     TMLNDTLHNIRTTNQALKKDLSQKTLTKTSLEEIALHSSQISMDVNKSAQLLDILSKK
                     EYPINKDARELLHSAPKEAELDGYEMISHRELWDKIAKSINNINEQYLKVYEHAVSSY
                     TQMYQDFSAVLSSLAGWISPGGNDGNSVKLQVKSLKDELTKLKEKYKDKPLYPANNTV
                     SKEQANKWLTELGGTIGKVSEKNGGYVVNINMTPIDNMLKSLDNLGGNGEVVLDNAKY
                     QAWNAGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSCTDTDKLFLHF"
     gene            complement(7334..8425)
                     /gene="ipaC"
                     /locus_tag="JQ356_000903"
     CDS             complement(7334..8425)
                     /gene="ipaC"
                     /locus_tag="JQ356_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS translocon subunit IpaC"
                     /protein_id="HAY4621071.1"
                     /translation="MEIQNTKSAPILYTDISTKQTQSSSETQKSQNYQQLAAHIPLNV
                     GKNPVLTTTLNDDQLLKLSEQVQHDSEIIARLTDKKMKDLSEMSHTITPENTLDISSL
                     SSNAVSLIISVAVLLSALRTAETRLGSQLSLIAFDATKSAAENIVRQGLAALSSSITG
                     AVTQVGITGIGAKKTHSGISEQKGALRKNLATAQSLEKELAGSKLGLNKQIDTNITSP
                     QTNSSTKILGKNKLAPDNISLSTEHKTSLSSPDISLQDKIDTQRRAYELNTLSAQQKQ
                     NIGRATMETSAVAGNISTSGGRYTSALEEEEQLISQASSKQAEEASQVSKEASQATNQ
                     LIQKLLNIIDNINQSRNSTASQIAGNIRA"
     gene            complement(8445..10187)
                     /gene="ipaB"
                     /locus_tag="JQ356_000904"
     CDS             complement(8445..10187)
                     /gene="ipaB"
                     /locus_tag="JQ356_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocon subunit
                     IpaB"
                     /protein_id="HAY4621072.1"
                     /translation="MHNVSTTTTGLPLAKILASTELGDNTIQAANDAANKLFSLTIAD
                     LAANKNINTTNAHSTSNILIPELKAPKSLNASSQLTLLIGNLIQILGEKSLTALTNKI
                     TAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQ
                     IQTRLSELAPDSPENKKLRREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLE
                     KEIDSFSAFSNTASAEQLSTQQKSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQ
                     SLQESRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTIVSVVAAAFSGGASL
                     ALAAVGLALMVTDAIVQAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVD
                     SKKAKMIGSILGAIAGALVLVAAVVLVATVGKQAAAKLAENIGKIIGKTLTDLIPKFL
                     KNFSSQLDDLITNAVARLNKFLGAAGDEVISKQIISTHLNQAVLLGESVNSATQAGGN
                     VASAVFQNNASKNLADLTLSKYQVEQLSKYIGDAIEKFGQLQEVIAELLASMSNSQAN
                     RTDVAKAILQQTTA"
     gene            complement(10193..10660)
                     /gene="ipgC"
                     /locus_tag="JQ356_000905"
     CDS             complement(10193..10660)
                     /gene="ipgC"
                     /locus_tag="JQ356_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocator chaperone
                     IpgC"
                     /protein_id="HAY4621073.1"
                     /translation="MSLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAY
                     DFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN
                     DYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIKE"
     gene            complement(10718..11344)
                     /gene="ipgB"
                     /locus_tag="JQ356_000906"
     CDS             complement(10718..11344)
                     /gene="ipgB"
                     /locus_tag="JQ356_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgB"
                     /protein_id="HAY4621074.1"
                     /translation="MQILNKILPQVEFAIPRPSFDSLSHNKLVKKILSVFNLKQRFPQ
                     KNFGCPVNINKIRDSVIDKIKDSNSGNQLFCWMSQERTSYVSSMINRSIDEMAIHNGV
                     VLTSDNKKNIFAAIEKKFPDIKLDEKSAQTSISHTALNEIASSGLRAKILKRYSSDMD
                     LFNTQMKDLTNLVSSSVYDKIFNESTKVLQIEISAEVLKAVYRQSNTN"
     gene            complement(11360..11749)
                     /gene="ipgA"
                     /locus_tag="JQ356_000907"
     CDS             complement(11360..11749)
                     /gene="ipgA"
                     /locus_tag="JQ356_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgA"
                     /protein_id="HAY4621075.1"
                     /translation="MCRKLYDKLYEITGAKLDFNDKNQAFILLEEQIPVCITDNDEYI
                     FLTGLLNEHELFTENIINPEHILILNYSLSRDYGSSICLLPDTHQCVLTKKHYKKYLS
                     PDELIESLYEFLFCIKLTIANITSEVN"
     gene            complement(11762..13246)
                     /gene="icsB"
                     /locus_tag="JQ356_000908"
     CDS             complement(11762..13246)
                     /gene="icsB"
                     /locus_tag="JQ356_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector IcsB"
                     /protein_id="HAY4621076.1"
                     /translation="MILKISNFIDASNTKGPIRVEDTEHGPILVAQKFNLKDLFFRTL
                     STINAKINSQILNEQLKNYRLANQKSLLLFLKTLASEKSAESAFAAYEAVKNSIQHSF
                     TGKDIKLMLNTAESFHGIGTAKNLERHLVFRCWGNRGITHLGHTSISIKNNLLQEPTH
                     TYLSWYPGGNVTKDTEINYLFEKRSGYSVDTYKQDKLNMISDQTAERLDAGQEVRNLL
                     NSKQDQNNNKKIFFPRANQKKDPYGYWGVSADKVYIPLSGDNKTKDGKISYNLFGLDE
                     TNMSKFICQKKADAFRQLANYKLISKSENCAGMALNVLKAGNSEIYFPLPDVKLVATP
                     NNVYAYANKVRQRIESLNQSYNEIMKYIESDFDLSRLTQLRRSYLKSFNKINLIHTPK
                     TFKPLSISLYKHPTENVSSEDFDAVINACHSYLVKSAPSNMSRVLNELKTGATDKKEV
                     IIEKSIKTIDYYNSLKSPDLGTKLYIHDLLQVNKLLLNNSHSNI"
     gene            13560..15176
                     /locus_tag="JQ356_000909"
     CDS             13560..15176
                     /locus_tag="JQ356_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector inositol
                     phosphate phosphatase"
                     /protein_id="HAY4621077.1"
                     /translation="MHITNLGLHQVSFQSGDSYKGAEETGNQKGVSVISYQRVKNGER
                     NKGVEALNRLYLQNQTSLTGKGLLFARDRAAVFYEAIKLAGGDTSKIKAMMEQLDTYK
                     LGEVDKRNINELNKVISEEIRAQLGIKNKKELQSEIKQIFTNYLNNKNWEPINKNINY
                     NGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESKHIANMWLSKVVDDEGKE
                     IFSGIRHGVISAYGLKKNSSERAVAARNKAEELASAALYSRQELLSQALSGKTVDLKI
                     VSTSLLTPTSLTGGEESMLKDQVKALKELNSKRGEPTKLLIRNSDGLLQEVKVNLKVV
                     TFNFGVNELALKMGLGWRNVDKLNGESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKN
                     DVIYLANQIKEILNKKLQKNDNGEPYKLSQRMALLAYTIGAVPCWNCKSGKDRTGMQD
                     AEIKREIIRKHETGQFSQLNSKLSSEEKRLFSTILMNSGNMEIQEMNTGVPGNKVMKK
                     LPLSSLELSYAERIGDPKIWNMVKGYSSFV"
     gene            15186..15548
                     /gene="ipgE"
                     /locus_tag="JQ356_000910"
     CDS             15186..15548
                     /gene="ipgE"
                     /locus_tag="JQ356_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgE"
                     /protein_id="HAY4621078.1"
                     /translation="MEDLADVICRALGIPSIDTDDQAIMLDDDVLIYIEKEGDSINLL
                     CPFCALPENINDLIYALSLNYSEKICLATDDEGGSLIARLDLTGINEFEDIYVNTEYY
                     ISRVRWLKDEFTRRMKGY"
     gene            15548..16006
                     /gene="ipgF"
                     /locus_tag="JQ356_000911"
     CDS             15548..16006
                     /gene="ipgF"
                     /locus_tag="JQ356_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgF"
                     /protein_id="HAY4621079.1"
                     /translation="MSRFVFIFLCFIPYLGRADCWDKAGERYNIPSSLLKAIAEKESG
                     FNKFAVNVNNNGSKDYGIMQINDFHSKRLREMGYTEEMLISHPCLSVHYAAKLLNEFM
                     LMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYKRYLRIAAESKQNNRRI"
     gene            16015..17130
                     /gene="mxiG"
                     /locus_tag="JQ356_000912"
     CDS             16015..17130
                     /gene="mxiG"
                     /locus_tag="JQ356_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiG"
                     /protein_id="HAY4621080.1"
                     /translation="MSEAKNSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETL
                     EFGNDNFPENIIPVTDSKSDGIIYLAISKDNICQFSDEKGEQIDINSQFNSFEYDGVS
                     FQLKNMMEDKSRVHILNGMYNKPSVFFFFAVIVVLIIIFSLSLKKDEVKEIAEIIDDK
                     RYGIVNTGQCNYILAETQNDAVWASVALNKSGFTKCRYILVSNKEINRIQQYINQRFP
                     YINLYVLNLVSDKAELLVFLSKERNSSKDTELEKLKNALIVEFPYIKNIKFNYLSDHN
                     AREDAKGIFTKVNVQYKEICETNKVTYSVREELTDEKLELINRLISDHKNVYGDQYIE
                     FSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFFLDKNK"
     gene            17138..17389
                     /locus_tag="JQ356_000913"
     CDS             17138..17389
                     /locus_tag="JQ356_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscF/YscF/HrpA family type III secretion system
                     needle major subunit"
                     /protein_id="HAY4621081.1"
                     /translation="MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNP
                     QLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR"
     gene            17402..17695
                     /gene="mxiI"
                     /locus_tag="JQ356_000914"
     CDS             17402..17695
                     /gene="mxiI"
                     /locus_tag="JQ356_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod protein
                     MxiI"
                     /protein_id="HAY4621082.1"
                     /translation="MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQ
                     VSQIMEMVSHPESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS"
     gene            17701..18426
                     /locus_tag="JQ356_000915"
     CDS             17701..18426
                     /locus_tag="JQ356_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscJ/YscJ/HrcJ family type III secretion inner
                     membrane ring protein"
                     /protein_id="HAY4621083.1"
                     /translation="MIRYKCFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHN
                     ITARKVDGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPRAE
                     KARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVIAIYDSPKESE
                     LLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPVKEIKSEFLTNEVIYVFLG
                     MAVLVVILLVWAFKTGWFKRNKI"
     gene            18423..18950
                     /locus_tag="JQ356_000916"
     CDS             18423..18950
                     /locus_tag="JQ356_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion apparatus protein OrgA/MxiK"
                     /protein_id="HAY4621084.1"
                     /translation="MIRMDGIYKKYLSIIFDPAFYINRNRLNLPSELLENGVIRSEIN
                     NLIINKYDLNCDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGK
                     ISKQGEAAIRSGFWHLIEWKENISVGIYERINLLFNPIALEGNYTPVERNLSRLNEGM
                     QYAKRHFTGIQTSCL"
     gene            18892..19587
                     /locus_tag="JQ356_000917"
     CDS             18892..19587
                     /locus_tag="JQ356_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MxiN"
                     /protein_id="HAY4621085.1"
                     /translation="MKVCNMQKGTLPVSRHHAYDGVVIKRIEKELCKTIKDRDTESKK
                     KAICVIKDATKKAESLRIDAVCDGYQIGIQTAFEHIIDYICEWKLKQNENRRNIEDYI
                     TSLLSENLHDERIISTLLEQWLSSLRNTVTELKVVLPKCNLALRKKLELDLHKYRSDV
                     KIILKYSEGNNYIFCSGNQVVEFSPQDVISGVKIELAEKLTKNDKKYFKELAHKKLRQ
                     IAEDLLKENPVND"
     gene            19580..19987
                     /locus_tag="JQ356_000918"
     CDS             19580..19987
                     /locus_tag="JQ356_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mxi-Spa secretion machinery protein MxiL"
                     /protein_id="HAY4621086.1"
                     /translation="MINQINASNALQQRLNSEEFVNLNERLSSSQSFDENIIYEIMQY
                     FSQSELNSIDNDELHNKIEQLFNSRFPYLTAAQKSSLLNKLIDANQYVDLHEGFYASL
                     SIYNNIDFYIKTTTFDSLISVFEAGREADDSTW"
     gene            19971..20399
                     /gene="mxiM"
                     /locus_tag="JQ356_000919"
     CDS             19971..20399
                     /gene="mxiM"
                     /locus_tag="JQ356_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system pilotin MxiM"
                     /protein_id="HAY4621087.1"
                     /translation="MIRHGSNKLKIFILSILLLTLSGCALKSSSNSEKEWHIVPVSKD
                     YFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKI
                     AIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI"
     gene            20529..21161
                     /gene="mxiE"
                     /locus_tag="JQ356_000920"
     CDS             20529..21161
                     /gene="mxiE"
                     /locus_tag="JQ356_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional activator MxiE"
                     /protein_id="HAY4621088.1"
                     /translation="MEGFFFVRNQNIKFSDNVNYHYRFNINSCAKFLAFWDYFSGALV
                     EHSHAEKCIHFYHENDLRDSCNTESMLDKLMLRFIFSSDQNVSNALAMIRMTESYHLV
                     LYLLRTIEKEKEVRIKSLTEHYGVSEAYFRSLCRKALGAKVKEQLNTWRLVNGLLDVF
                     LHNQTITSAAMNNGYASTSHFSNEIKTRLGFSARELSNITFLVKKINEKI"
     gene            21148..22848
                     /gene="mxiD"
                     /locus_tag="JQ356_000921"
     CDS             21148..22848
                     /gene="mxiD"
                     /locus_tag="JQ356_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system secretin MxiD"
                     /protein_id="HAY4621089.1"
                     /translation="MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDT
                     VGSFFERFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKMTLLVGLIWYKDGNAL
                     YIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
                     LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLL
                     NNGKALSNRQAKNDPMPPFNITQKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSIL
                     VKGNDQQIQIIRDIITQLDVAKRHIELSLWIIDIDKSELNNLGVNWQGTASFGDSFGA
                     SFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVS
                     LVGERNSSLEHVTYGTLINVIPRFSSQGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
                     EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFKYKTRNISN
                     IVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSLVSYLNY
                     "
     gene            22867..23934
                     /gene="mxiC"
                     /locus_tag="JQ356_000922"
     CDS             22867..23934
                     /gene="mxiC"
                     /locus_tag="JQ356_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system gatekeeper subunit
                     MxiC"
                     /protein_id="HAY4621090.1"
                     /translation="MLDVKNTGVFSSAFIDKLNAMTNSDDGDETADAELDSGLANSKY
                     IDSSDEMASALSSFINRRDLEKLKGTNSDSQERILDGEEDEINHKIFDLKRTLKDNLP
                     LDQDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVESLTKIINEIISGSEKSVNAG
                     INSAIQAKLFGNKMKLEPQLLRACYRGFIMGNISTTDQYIEWLGNFGFNHRHTIVNFV
                     EQSLIVDMDSEKPSCNAYEFGFVLSKLIAIKMIRTSDVIFMKKLESSSLLKDGSLSAE
                     QLLLTLLYIFQYPSESEQILTSVIDVSRASHEDSVVYQTYLSSVNESPHDIFKSESER
                     EIAINILRELVTSAYKKELSR"
     gene            23947..26007
                     /gene="mxiA"
                     /locus_tag="JQ356_000923"
                     /gene_synonym="virH"
     CDS             23947..26007
                     /gene="mxiA"
                     /locus_tag="JQ356_000923"
                     /gene_synonym="virH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiA"
                     /protein_id="HAY4621091.1"
                     /translation="MIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLN
                     IVLAILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKIITTF
                     GQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
                     AGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIGGISVGMSQ
                     HGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDSDNMGRNIMSQIFG
                     NPFVLIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYT
                     GTFDIDNSHDSSLAMIENLDAISSETVPLILLFAENKISANDMEGLIERIRSQFFIDY
                     GVRLPTILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDALGIPVVST
                     SYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIFGIQETKNMLD
                     QFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREKDVIT
                     LVEHVRASLSRYICSKIAVSGEIKVVMLSGYIEDAIRKGIRQTSGGSFLNMDIEVSDE
                     VMETLAHALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINV
                     LKTI"
     gene            26020..26421
                     /gene="spaK"
                     /locus_tag="JQ356_000924"
     CDS             26020..26421
                     /gene="spaK"
                     /locus_tag="JQ356_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone SpaK"
                     /protein_id="HAY4621092.1"
                     /translation="MSNINLVQLVRDSLFTIGCPPSIITDLDSHSAITISLDSMPAIN
                     IALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSDEYLQLRV
                     VIKDDYVHDGIVFAEILHEFYQRMEILNEVL"
     gene            26425..27717
                     /locus_tag="JQ356_000925"
     CDS             26425..27717
                     /locus_tag="JQ356_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HAY4621093.1"
                     /translation="MSYIKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNE
                     IIARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEV
                     TDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEGQRMGIFAS
                     AGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKSRCVLVYATSDY
                     SSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPV
                     SVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLA
                     QKGQFPAIDSLKSISRVFTQVVDEKHRIMATAFRELLSEIEELRTIIDFGEYKPGENA
                     SQDKIYNKISVVESFLKQDYRLGFTYEQTMELLGETIR"
     gene            27810..28148
                     /gene="spaM"
                     /locus_tag="JQ356_000926"
     CDS             27810..28148
                     /gene="spaM"
                     /locus_tag="JQ356_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface presentation of antigens protein SpaM"
                     /protein_id="HAY4621094.1"
                     /translation="MEALDKRIIYFLQLENDLEPVGAQSVSQLFNTRRKIAIVKKHII
                     QYQSERILLKGRIEEIQKDIDEANASKRKLLHKESKICKRIGLIKRNNFAKQLILDEL
                     SQEDMKYGIR"
     gene            28135..29013
                     /gene="spa32"
                     /locus_tag="JQ356_000927"
     CDS             28135..29013
                     /gene="spa32"
                     /locus_tag="JQ356_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle length
                     regulator Spa32"
                     /protein_id="HAY4621095.1"
                     /translation="MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEY
                     SLIASNYFTIDKHFEHKHDKGEIYSGIKNAFELRNERATYSDIPESMAIKENILIPDQ
                     DIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVNPDNLLESDNRNGQIGLKNHS
                     LSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDKNVFQKNSE
                     MTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKG
                     NKNNSTGYNEQSEEEC"
     gene            29007..29888
                     /gene="spaO"
                     /locus_tag="JQ356_000928"
     CDS             29007..29888
                     /gene="spaO"
                     /locus_tag="JQ356_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000944309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein SpaO"
                     /protein_id="HAY4621096.1"
                     /translation="MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLT
                     SVCGDWVIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKITF
                     RITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEFCLGSSNVRLA
                     TLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKINLSESNGESDHTEVSLAL
                     FNYDDINVKVDFILLEKKMTINELKMYVENELFKFPDDIVKHVNIKVNGSLVGHGELV
                     SIEDGYGIEISSWMVKE"
     gene            29893..30543
                     /gene="spaP"
                     /locus_tag="JQ356_000929"
     CDS             29893..30543
                     /gene="spaP"
                     /locus_tag="JQ356_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaP"
                     /protein_id="HAY4621097.1"
                     /translation="MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQ
                     QVPSNMTLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQY
                     LKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDAFKIGFYLYLP
                     FIVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA"
     gene            30558..30818
                     /gene="spaQ"
                     /locus_tag="JQ356_000930"
     CDS             30558..30818
                     /gene="spaQ"
                     /locus_tag="JQ356_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaQ"
                     /protein_id="HAY4621098.1"
                     /translation="MSDIVYMGNKALYLILIFSLWPVGIATVIGLTIGLLQTVTQLQE
                     QTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMFLIKSGV"
     gene            30818..31588
                     /gene="spaR"
                     /locus_tag="JQ356_000931"
     CDS             30818..31588
                     /gene="spaR"
                     /locus_tag="JQ356_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858288.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaR"
                     /protein_id="HAY4621099.1"
                     /translation="MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIR
                     IPVIFLVASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVGSI
                     IDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILESIQLSYNICPL
                     FSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQMNAFSVSLT
                     IKSLLAIFIIFICSSTIYFSKVQFFLGEHKFFTNLFVR"
     gene            31595..32623
                     /gene="spaS"
                     /locus_tag="JQ356_000932"
     CDS             31595..32623
                     /gene="spaS"
                     /locus_tag="JQ356_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     switch protein SpaS"
                     /protein_id="HAY4621100.1"
                     /translation="MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISF
                     FSLSDVMLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQTKF
                     VLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYFFWINDRKIIF
                     SQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKRE
                     YIEQEGHFETKSRRRELHIEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPF
                     ISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVW
                     LEQVENTH"
     gene            32636..32878
                     /locus_tag="JQ356_000933"
     CDS             32636..32878
                     /locus_tag="JQ356_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621101.1"
                     /translation="MCYMGVNFCNKIGIDQSEFEIESSIINSIANEVLNPISFLSNKD
                     IINVLLRKISSECDLVRKDIYRCALELVVEKTPDDL"
     gene            complement(33455..>33689)
                     /locus_tag="JQ356_000934"
     CDS             complement(33455..>33689)
                     /locus_tag="JQ356_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HAY4621102.1"
                     /translation="QRPPAGLIHHTDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDN
                     APMEIFWGTLKNESLSHYRFKSRDISSAYGKTD"
BASE COUNT        10514 a         4904 c         6737 g        11534 t
ORIGIN      
        1 ttgttgactg cctgtgcggc atctggtatc aaggtggcgt gaagccggtt caggttctca
       61 tgcggaacgt tggaacctat atccccccga taccaaaggc gaaatgtaag tgacaaaatg
      121 caatgaacac gttctccgtt aactgaggag catggtgata aataaaggta aatgcagaag
      181 gtgtagagtc tcgcagattt ctgacatcat agagcctaac attagatgca taacgctaca
      241 gattgtagaa tctctacagg tgaaatatac actggttggc gtttatgtcg caaaacatgt
      301 cattcaggtt catctcacca ataaggatat gagtgaagtg gaggataagt gagtctgctg
      361 tcagagtttt ctggtgtatg tcagtaactg cgaaccatgt ctgcttgata tgggagctta
      421 tggaggctct ctgtacaagg ttagggagct aacaaagcag ggataaaaag tccgcctgat
      481 gcaggcacgg ttcgttaaat cttttgccat tggtaacaaa atggtgcgat gaatgttcag
      541 gctatcttta tcttgatggt ggttcagctg tttggtaaag aaatcgctgt aacaatagaa
      601 gaactgcagg cagtactggt cccacatcgt ttgctcagtc aactggtgaa gttccgtagc
      661 gcgtaaatta atgctttgca tgaaacgtta ctggagtgga tgaaagaata cctgcatata
      721 tcattactgc gttggattac cagtacaaca gattgaatga actggacatg ttgatagacg
      781 gcattgaaaa gcagcttata agcatagtgc ggcagagtta attggagagc acttcgcctt
      841 ctgagtatta agtaatcatg gtggtacctg cggatactat ctattcactg tgctcggtcg
      901 gcagccttac tgaccaagga gttgggggag ttgataacaa agttgaaaaa acagctctca
      961 accaaggtgg ttattgtaac aatagcaaat aagctggtgt gacctgtatc acaataaccg
     1021 attatggacg taaatacgac aaaaatatgt cagtatcagg cggtattaat tgctgatgct
     1081 gatggacatt aactcttaat aaaagggtgg atgctgaaag gttgttatgg tgacggacgt
     1141 gatgacgacg gaaaagagta tgaggttttg gatttaaagt tcgttcgggg aataaggacc
     1201 cggtcagcta attctcatag tagttcgcat tgctggatgc aatactgtgc tgcaattact
     1261 cgtcgatgtc ggaacaacgg aagccttgca aacggggatg tattcataca ggtgttatgt
     1321 tatatggggt tttattgcag ggggctatac caagagaata tatgatatct catcagactg
     1381 atgtgagggt aaatgagaat agagtaaacg aacaaggttg ttttttggcg aggaagcaga
     1441 tgtatgacaa ttcttgtgga gctgccagtt tactctgtgc tgcaaaggaa ttaggggttg
     1501 ataaaatacc acaatacaaa gggtctatgt ccgaaatgac aaggaagagt tctcttgatt
     1561 tggataatcg ttgtgagcgg gatttatact taataactag tggtaattat aatccgagaa
     1621 tacacaaaga taatatcgcg gatgccggtt attctatgcc tgataagata gtcatggcta
     1681 cgaggcttct tggattgaat gcttatgtcg ttgaagaaag taacattttt tcgcaagtaa
     1741 ttagttttat ttatcccgat gcaagggact tattaattgg catgggatgt aatatagtac
     1801 atcaacgaga tgtgttatct tctaaccaaa gagttttgga agctgttgct gtatccttta
     1861 ttggagttcc tgtcggcctc cactgggtgt tgtgtagacc tgatggaagc tatatggatc
     1921 cagctgtagg agaaaattat tcttgttttt caactatgga attaggtgca agaagaagta
     1981 attctaactt tataggatat actaaaatag gtatttccat agttataact aatgaggctt
     2041 tgtaaattgt cgttttttat ctgtgaagga gcttgaatat tttggggcgg gggcataaca
     2101 aatgatatta ctgagtacaa atttagctat attgggcgga ttagttgtgt gggaagacga
     2161 aatgtttctc ttgaaataag tgaactccct caaggaatga ttgtgtgctt aaatatttaa
     2221 gtgctggtaa gtttgagaag gctgacatat tttgcagagc aaacagtgat tgacttggat
     2281 gatattttta ttttagtcac tcgttgtaat tggagtatgc tttattttat ttgaaaatag
     2341 atgtatttta tacccgcaat ttaaactgta agccctatga ggggtatgga tattataagt
     2401 tactctttga ctaagcataa cttttggggt tagaaaaata aatctcttgt taataattaa
     2461 tatgatttta aaatcaaact tgtttataat tataaaatca tgtaagtcgg tcattttatg
     2521 ggaagattag gagaataaaa cagtaattat atttgagaaa tctgctaata tattcttaaa
     2581 gcttttttga tactgtgaac gaagtctgtt aatggtggat tttttgttta tcaccatgta
     2641 aaaaattgag tagtaaaagc gttgactgct aatcctcgct gtttttattg aaacgattaa
     2701 aaatacgctg aatattttcg gccagtcact catcttcaca taaaattttg accatcatgc
     2761 cgcatccctt agttgcacaa ttcattttca atgatatgaa tattactaat ttcaccagat
     2821 aatgttctcg tggtcagcag ggtatgagtt ttcaccgtaa ttttaaggaa acacagtgcg
     2881 tggggattga ataacagata gccgacggaa ttaccccacc ggctgaaagt caagttcaac
     2941 gaagattttt attatctgaa ttgggcagtt tacatcagtg ttcgatgttt atgaagacga
     3001 tagatggcga gaaattatat ctcgaatagc ttcatctatt tctctctgaa ctgttttgtt
     3061 tattttagat aatgtaaata ttagagttct gtttgtttta ttctcttttc tttttatgta
     3121 agtccgtttg tctttagaaa taaataacga gtcaactttt agcgaagggt tttgctttct
     3181 gtttttgctt ttctttatga tgtttaaaat ttctttttta tatatgtccg ggggcaaatt
     3241 tgtatcaagg tcttttattt cttcctttaa tattggtagt gtagaactaa gagattcatt
     3301 agccttttca agtcctttat aataattgaa taatatcttg tagtcattaa agttaagttc
     3361 tgacgcgatt ggaaatagag atattatttc ctgtggaacg cttgctgcct gaaaggcacg
     3421 agtgactttc gcgcgagaca gattctcttt tttggctatg tctttatagg acatccctga
     3481 tactttcaga aaattaagac caataccaag ttctcggatg ctatgctctt ttgctgtttg
     3541 tatatcgttt gctagttttc tggcatcaag agtagatata tattcttttg aatatagaac
     3601 ttcaagatct gctcctgcat atattgcaga tgctcttcta cgagtgccat ccagaatttc
     3661 aattctacca tcaatctccc ttcctattac agggaagaat tgttgtagct ttatagtttt
     3721 tatgatatcg gctaatgatt cttctgttag ggattcttga tcgcgtacat tcgttttttg
     3781 gttgacgaag gttaaatctt ggatcctttt atgaggaatc ttggctttga taaaggaaac
     3841 tttattacca gaatggagtg taaactcttt cttttggcct tcctttatac ttaacaagtc
     3901 gttgcacaaa tccaccatat cacaccctgt ttattcatat tgatttatat tgacaaaagt
     3961 taaatgcagt gtgagcaaga ttgtatgtaa ctgttgatga tagtcaacgg tagtcttaaa
     4021 aattactatt ttaatagctg gattgatgca atttatcttt attggataaa agaataatat
     4081 tcttgtggag ctctgatgtg agagctccat agatgaaaaa atgcttatca attactatat
     4141 tgattttgta ctatttttga ctacagaaat aagatctcca atagtaataa tgtgttctaa
     4201 tgcagattca tctatacgta gattgaactc aaaactaatc atatccagca tttcaatcag
     4261 agaaagagaa tcggcagaaa gatcttcaat aaatttagtt tcttcagata gtttgctgta
     4321 cgctatacca tagcaaaagg ccactattga taatattttt tcttttatca tattttaatc
     4381 cttattgata ttctttaata cttttgatag ggaagtggtt acatcttttg ctgctttata
     4441 tatattattg ttttcagctg taatatcatt gttatttttt aaatcagata tatcatctgt
     4501 aagtaattct gcagaggtat cgtcaatttt tgacaatacc ttgctgaggg cgctagatac
     4561 ttcttttgcc ttttcataga tcgcatgatt tttatcaatt gtatctgcgt tggtttctgt
     4621 tacgtagttt attgtatttg catctgtaac ttttaatttg ttgtttattc tgtgttctgt
     4681 tgtggatttt gtaatgtcct ttgatttttc ctgtaactct cgttcttgtg ttcctgattt
     4741 agttccaatg agagatataa gattacttag ggagtttgtt actttttttg aagcttcaaa
     4801 tatcgtttcc cgtgttaaat atgtgtctcc atttcttgat aaaaaatcag tctgaagtac
     4861 ttttgaatca gtgtttgagt tgaatttatt gatttgcgaa gctactctat gagaaagaga
     4921 agcgctactt ttagttgtat ctgatgagtt atcattactg cttgtcactc cttccgggtg
     4981 gagagggggg gtggttgaag agttctgtat gttcagaggc ctgtgtcccc gagaaagaga
     5041 gttatttgta gatctttctt gactactcgt agttaacagg tctgaaccta ttccatccga
     5101 attatctgga gtatggttga aaaccttttc taaagctgaa ttatttgcaa atgtctggac
     5161 agcatctgat atagagtgtg gtagaacgga agttactttt tgaactagtg ctctttgtgg
     5221 atttagtaat gagtttccgt tacgggataa tagatcgttt gtctgagaag taggagactg
     5281 tgcatcattt tctgggttct cgtgatagct attgtcatat actctgttgt caaaaactct
     5341 attatcgtaa gttctattat cattatttat atgatagtga attacaggtt gggatgtttt
     5401 ctcattggct ccgggggttg gtccgccatc tggcatatct tcgggaggtg tagggaggcc
     5461 atcttggata ggatgcgaat cttttatatc ttctaaaata tcattaagga cttttctcaa
     5521 cagctcagga aacacggcta ctgtatttaa gtctcttgac agtttaccta taccaaatcc
     5581 tttactatca atagtatttt tacgttgatt gcgcaaacta tcaaaggcaa gttttgcctg
     5641 tgcgtcaact aaatcatcta gtttgagaga tgaaacagtt tcattactta actttaattc
     5701 agcaagaata ttattcttga taaatgatga tacttcagta ttgaggagtt tttgtcccaa
     5761 tgataaagct tcaccagatg tgtgttgttg tgctaatagt gcaagtctgt gctcaatgtt
     5821 ttgtcgtaat tgatggagtt tcttattctt tgccgaccat ggtccaaagg cagaatcttg
     5881 ggataattta tcttttataa ttagttccga atactgtgcg acaatttttt gaagtccctt
     5941 ttcgttttca aaattaagat cattttgatg tactaaggag tacaaaacat ttgaaaattc
     6001 gagaatctcg cttttggcat acgcattcat tgagttggaa taaatgcttc ttaacacatc
     6061 ttctttccct gaggaagaaa ataaaaaatc aagacatttc tgattaaaag acgttgcaaa
     6121 gttttctttt tcagacactg atgctggtgt ttttagagaa gtttgcgaac tatggatatc
     6181 ggatattttg ctttttaact cgctgtattc tgttgatgat ggtgaagttg ccttatataa
     6241 gaatgttggc gcttgagtat tatttacatt atgcatggcg cacctcagaa atggagaaaa
     6301 agtttatctg tatctgtaca tgagcttatt gtactactca aaacctttac taaattatca
     6361 aaaatactat tggcattact gtatttttga actaaagttt gaagattatt tttcattgtt
     6421 tcatcttcgg cagagaatcc ggcattccat gcctgatatt ttgcattatc tagcacaacc
     6481 tcgccatttc cacctagatt atctaagctt tttaacatat tgtctattgg ggtcatgttt
     6541 atattgacaa catatccccc gtttttttca gataccttgc cgattgttcc acctaattct
     6601 gtaagccatt tatttgcttg ttccttacta acagtattat ttgctggata tagcggttta
     6661 tctttatatt tttccttgag ctttgtcaat tcgtctttaa gcgatttgac ttgtaatttc
     6721 acggagtttc cgtcgttacc tccgggagag atccagccgg caagactgga aagaacagcg
     6781 ctaaaatctt gatacatttg agtatatgaa ctaacggcat gttcatatac tttcagatac
     6841 tgttcattaa tattattgat tgactttgca attttatccc acagttctct gtgagatatc
     6901 atttcatatc catcaagctc ggcttctttc ggggctgaat gtaataattc tcttgcgtct
     6961 ttattaattg gatattcttt cttggaaaga atatccaata gttgagcgga tttgtttaca
     7021 tccatgctaa tctgagatga atgtaatgct atttcttcta gcgatgtttt agtcaacgtt
     7081 ttttgtgaga gatctttctt taatgcctga tttgttgttc tgatattatg aagggtgtcg
     7141 ttgagcatag taagggaact tacaggatga gaactggtcg ttgtttttat atcagaatta
     7201 actgtttcgg ttgatgaacc gttggtattg tttgggctga atgatgaggt ggaaatacta
     7261 ttagtcagag ttgttatatt catggttatt tccttatagg aagagccata tattattatg
     7321 gctcttggat atattaagct cgaatgttac cagcaatctg actggctgta gaattccttg
     7381 attggttgat gttgtcaatt atattcaata atttttgtat taattgattt gtcgcttggg
     7441 atgcttcttt agatacttgg gatgcttcct ctgcttgttt actgctggcc tgactgatta
     7501 gttgttcttc ttcttcaaga gcagatgtat aacgccctcc tgatgtggat atattaccag
     7561 caacggctga tgtctccatt gttgcacggc caatgttttg tttttgctga gcagaaaggg
     7621 tattgagctc gtaagctctt ctctgggtgt caattttatc ctgcaaagaa atatcgggag
     7681 aactaagaga agttttatgt tcagttgaca gggatatatt atctggtgcc agtttatttt
     7741 tacctaaaat ttttgtgcta gagttagttt gtggtgaggt gatatttgta tctatttgtt
     7801 tatttaaccc taatttagaa cctgcaagct ctttttcaag agattgagca gtggcaaggt
     7861 tctttcttaa ggctcctttt tgttcgctaa tccctgaatg cgtttttttg gcaccgatac
     7921 ccgttatacc tacttgtgtg accgctccag taatgcttga tgatagggct gctaggcctt
     7981 gccgaacaat gttctctgca gctgattttg tagcatcgaa cgcaatcaat gacaattgag
     8041 agcccaatct agtttctgca gtgcggagag cagaaagtag aacggctaca ctaataatta
     8101 aagaaacagc attagaagaa agactggaaa tatccagggt gttctctggg gtaattgtgt
     8161 gactcatttc tgaaagatct ttcatctttt tgtcagtaag gcgagcaatg atttctgaat
     8221 catgctgaac ctgctctgat aactttaaaa gttgatcatc atttaatgta gttgttaata
     8281 cgggattttt accgacatta agtggaatat gtgctgctaa ctgctgataa ttttgtgatt
     8341 tttgtgtttc ggaagaactt tgagtttgtt ttgtagatat atctgtatat aaaatcgggg
     8401 ctgattttgt gttttgaatt tccataacat tctccttatt tgtatcaagc agtagtttgt
     8461 tgcaaaattg cttttgcaac atcagttcta ttagcctgag agttggacat tgaggctaac
     8521 agctctgcaa ttacttcctg caattggccg aatttttcta ttgcgtcacc gatgtatttt
     8581 gacagttgtt caacttgata tttcgataat gtcaggtctg ctagattttt cgacgcgttg
     8641 ttttggaaaa cagcagaagc gacatttcct cccgcttgtg tggcagagtt aacactttct
     8701 cctaataaaa ctgcttggtt taaatgggtg gaaataattt gtttggatat tacttcatca
     8761 cccgctgcac caagaaattt atttaatctg gcaacagcat tagtgattaa atcgtccagt
     8821 tgagaagaaa aattcttgag aaactttggt ataaggtctg tgagggtttt acctattatt
     8881 ttgccaatat tctctgcaag ttttgctgct gcctgtttac caacagtggc tacgagaacg
     8941 actgctgcaa ccaagacaag agcgcctgcg attgccccca gaatagagcc aatcattttg
     9001 gcttttttcg agtcgacgcc caagccttcg agcatttttg taaatgcatc tgaaaggagt
     9061 ttgattaagg gttcaatgac tgctttcatg atcggattca gggcttgttc catgaaggaa
     9121 ttgccggtcg ctgcttgtac tatagcatcc gtaaccataa gagctaaacc aacagctgcc
     9181 agtgctagag atgctcctcc agaaaaagct gctgcaacaa cactaacgat agttaaaagt
     9241 gccccaagta ttttcccaac acaacccatt actctgttga gttcttctgc tttacgtact
     9301 tcagcagcat actcatcaga ttttctctcc atttcagttt ttcttgattc ttggagagac
     9361 tggaatagag ccagatcatt ttttaaagat tcttcattat tttttccaac tagttgaata
     9421 aaggttgcca tcaattgagt aacactggca agtccggtta atgatttctg ctgggttgat
     9481 agctgttcag cagatgctgt gtttgaaaat gcagaaaaag agtctatttc tttttcgagt
     9541 tgcattgatt tatctgtaag tttgctatga attgacagag ttttctgctc aatcaatgtc
     9601 ctgtctttaa ctgctgcgtc ttttttgata gtgagttgta tttcttcccg tcttaatttt
     9661 ttattttctg gtgaatctgg ggcgagttcg gataatcttg tttgaatttg gttaatttta
     9721 ttttctaggt cttttatttt tgaatctgcg ttttttagtt tattaatttg tttttcatag
     9781 tctctggtta gtccttcagt ttcagataga agagtattaa ttttatcgga gaattctagg
     9841 tttttttgct gtcttgcctg ttgctgggac ttccaggcag taattttatt tgttaatgca
     9901 gttaaagatt tttcaccaag tatttgaata aggtttccaa ttaaaagcgt tagttgggaa
     9961 cttgcattta atgactttgg tgctttaagt tcagggatta atatattcga agttgagtgt
    10021 gcattagttg tattaatatt tttgttagca gcaagatcag caattgtaag agaaaataat
    10081 ttgttagctg catcatttgc agcctggata gtattgtctc caagctcagt ggaagccaat
    10141 attttggcaa gaggcaaacc agtggttgtg gtgcttacat tatgcataat aattactcct
    10201 tgatatcctg aattgcgtct aagtatgatt gtgcttttat ttttaatttt tcatcattgc
    10261 tgtgttgaat tacgagttcg aagcactctt tggctttcaa gggggctttc aaccgaagct
    10321 ggcattgtcc agtatggaat accggtgtat agtcattttt tcctaatgca aaagcgacag
    10381 cataaaggtc tgctgcttgt tggaactgtt cttttatctg ataaatagct gcgagtccca
    10441 taatgtagtc tacattgtaa aagtcgtata tacataaaaa tctgaagaaa acttcagctt
    10501 cctctattct tcctttgttg taaaagtcat aagcatatga ataaatgtca tccatcatat
    10561 catcaggaat tgcattaata tctttcagtg tagcgccaga gttaattgca tcaattactg
    10621 cagtagagat gctttcattt tcagtgatat ttaaagacat aaggtctcct ttttgtctgc
    10681 attactttaa taagtataag atttaatata aacagattta atttgtattg ctttgacggt
    10741 atacagcctt tagaacctct gcgcttattt ctatttgtaa aacttttgtt gattcattaa
    10801 atattttatc gtagacggaa ctggatacta gatttgtaag atccttcatt tgtgtgttaa
    10861 acaaatccat gtcactgcta taacgtttta aaatctttgc tctgaggcca gatgaggcaa
    10921 tctcgtttag tgctgtatga ctgatagatg tttgtgctga tttttcatca agttttatat
    10981 ccgggaattt tttttcaata gctgcaaata tgtttttttt gttatctgag gtcaaaacaa
    11041 ctccattgtg tatggccatt tcatctatac ttctgtttat cattgaagag acataagagg
    11101 ttcgctcttg gctcatccaa caaaatagtt gattccccga attactatct tttattttgt
    11161 ctatgacgct gtccctgatt ttatttatat tcaccgggca tccaaaattc ttctgaggaa
    11221 agcgttgttt taagttaaaa acagataata ttttctttac aagcttattg tgacttaacg
    11281 aatcaaatga tgggcgagga atcgcgaatt caacctgtgg aagtattttg tttagaattt
    11341 gcatgatacc ccctatatgt tagttcactt ctgaagtgat gtttgcaatg gttagtttaa
    11401 tacaaaataa aaattcgtac aaagattcaa tgagttcatc aggtgaaaga tattttttgt
    11461 agtgtttctt ggtcaaaaca cattgatgag tatcagggag aagacagata gaagaaccat
    11521 aatctctact caaagagtag ttaaggatga gtatgtgttc tggattaata atattttctg
    11581 taaaaagttc atgttcatta agaagtccgg tcaaaaagat gtattcatca ttatctgtta
    11641 tacaaacagg tatttgttct tcgagcaata taaaggcttg atttttatcg ttaaaatcaa
    11701 gctttgcacc tgttatttca taaagtttat catatagttt gcgacacatt tctatggcct
    11761 tctatatatt agaatgagag ttattcaata aaagcttatt gacctgtaat aagtcgtgaa
    11821 tgtaaagttt ggttccaaga tctggcgatt taagagaatt gtaataatca atagttttta
    11881 ttgacttttc gataattact tcttttttat ctgttgctcc ggtttttaat tcgtttaata
    11941 cacgagacat attgctgggt gctgatttta ctaagtatga gtggcaagcg ttgatgaccg
    12001 catcaaagtc ttctgaagat acattttcag taggatgttt gtaaagtgaa attgataaag
    12061 gcttgaatgt ttttggggtg tggataaggt taattttatt gaaactttta agatagctac
    12121 gtcgtaattg agtcaatctg gaaagatcaa aatcagattc aatatacttc attatctcgt
    12181 tataagactg attgagactt tcaatgcgtt gcctaacttt atttgcatac gcgtatacat
    12241 tgttaggtgt agcaaccaat ttaacgtcag ggagtggaaa gtatatttca gaatttcctg
    12301 ctttaagaac attaagtgcc ataccagcac agttttcaga tttactgatt aatttataat
    12361 ttgccaattg tctgaaagca tctgctttct tttggcatat aaattttgac atgtttgttt
    12421 catcaaggcc aaaaaggtta tagctgattt taccatcctt tgttttatta tcacctgata
    12481 atggaatgta tactttatca gcactgaccc cccaataacc ataggggtct tttttttgat
    12541 tagctctggg aaaaaatatt tttttgttgt tattttgatc ttgttttgaa tttaataagt
    12601 ttctaacctc ttggcctgca tcaagtcttt cggctgtttg gtctgaaatc atatttagtt
    12661 tgtcttgttt ataggtatcg acactgtaac ctgagcgttt ttcaaaaagg tagtttattt
    12721 ctgtatcttt tgtaacattc ccgccgggat accagctgag ataggtatga gttggttcct
    12781 gtagtaaatt gttttttata ctgatactgg tatgccctaa atgggttatg cctctatttc
    12841 cccagcaacg aaacactaaa tgtctttcaa gatttttggc tgtaccgatg ccatgaaaac
    12901 tctctgcggt attcaacatt aatttgatgt ctttacctgt aaaagaatgt tgaattgaat
    12961 ttttgactgc ttcataggcg gcaaacgcac tttctgcaga tttttcgcta gctaatgtct
    13021 tgaggaaaag caataaggat ttttgattcg ctagtcgata attttttagt tgttcattta
    13081 atatctgtga atttatcttt gcattaatag tgcttaatgt tctgaaaaag agatccttta
    13141 ggttgaattt ctgtgctacc aatataggtc catgctctgt atcttcaacg cgtataggcc
    13201 cttttgtatt gcttgcgtca atgaaattgc taattttgag aatcatactt tattaactct
    13261 ccattacgtg gtgattgtgg ggatgtaaaa tgtatttgat atataatata ttcaattaat
    13321 aaatttagaa acttgagcct gttaacataa tcaaattttc ttttgctgta cataatatgt
    13381 acctcgtgag catatgtagt gctggtttca tcatgaaatc ccacaagtta aagtgtctga
    13441 tatatcaggc tcggagtgtt atagaaaaag agagaaccct gttgaataag tatctttttt
    13501 gttgtaaaac gaggtacaaa actgcaatca atgccccatt tatgactgag gataattaaa
    13561 tgcacataac taatttggga ttgcatcagg tttcatttca aagcggagat tcctataaag
    13621 gcgcagaaga aaccggaaac caaaaaggtg taagcgtgat ttcatatcaa agagttaaaa
    13681 atggagagag aaataagggg gtcgaagcgc ttaatcgatt atatttacag aaccaaacaa
    13741 gcttaacagg gaaaggcctt ttgtttgcgc gtgacagagc tgcagttttt tacgaggcaa
    13801 taaagttggc aggtggtgat acgtcaaaaa ttaaagccat gatggaacaa ttagatacct
    13861 ataaacttgg tgaagttgat aaaagaaata ttaatgagct taataaagta ataagtgaag
    13921 agataagagc acagctaggc attaaaaata aaaaggaatt gcaatcggaa ataaaacaaa
    13981 tatttactaa ttatttaaat aataagaatt gggaaccgat caacaaaaat attaattata
    14041 atgggaaaaa ttatggtttt caattaacac ccgcctctca tatgaagata gggaataaaa
    14101 atatatttgt caaagagtat aatggaaaag gaatttgttg tgcttctacg agagagagta
    14161 agcatattgc gaatatgtgg ctttcaaaag tggtggatga cgaggggaag gaaatttttt
    14221 cgggtatcag acatggagtt atatcagcct atggattgaa aaaaaactca tctgaaagag
    14281 ctgttgcagc tcgtaataaa gctgaggagt tagcaagcgc agcattatat agcagacaag
    14341 aattattatc acaggctttg tctggtaaaa cagtagattt aaagattgtt tcgacttctc
    14401 ttctgacgcc gaccagttta actgggggag aggagagtat gttaaaagat caggtaaagg
    14461 cattaaaaga gttaaactct aaaagggggg aaccaacgaa attattaatt cggaatagtg
    14521 atggtcttct gcaagaagta aaggttaatc taaaagtggt gacatttaac tttggtgtaa
    14581 atgaattagc gctaaaaatg ggcttaggct ggaggaatgt tgacaagctt aatggtgaat
    14641 caatatgttc tttgttgggg gataatttcc tcaaaaatgg tgtgattgga ggttgggctg
    14701 cagaagctat agaaaaaaat ccaccatgta agaatgatgt gatatatctg gctaaccaga
    14761 taaaagagat tctaaacaag aagttacaaa aaaatgataa tggagagccg tataaattgt
    14821 cacaaagaat ggctctattg gcttatacta taggtgctgt accttgctgg aattgtaaga
    14881 gtgggaagga cagaacaggt atgcaggatg ctgaaattaa aagagaaata ataagaaaac
    14941 atgaaacagg gcagttttct caattaaata gtaaattatc ctcagaagag aaaagattat
    15001 tttctactat tctaatgaat agtggtaata tggaaatcca agagatgaat actggtgtgc
    15061 ctggaaataa agttatgaaa aaattaccgc tatcttcgtt agagctgtct tatgctgaaa
    15121 gaatagggga ccccaaaata tggaatatgg tgaaagggta ttcgtcattt gtataagagg
    15181 aatatatgga agatttagca gatgttattt gccgagcctt gggtatccct tcaattgata
    15241 ccgatgatca agcaatcatg cttgatgatg atgtgttaat atatattgaa aaagaaggag
    15301 attcaataaa tttattatgt cctttttgtg cattgcctga aaatataaat gatcttatat
    15361 atgcgttgag cctaaattac tcagaaaaga tatgtttagc tactgatgat gaaggtggaa
    15421 gtctaatcgc gcgattagat cttaccggga taaatgaatt cgaggatata tatgttaata
    15481 cagaatatta tatttcgcgt gtgcgttggc tgaaggatga atttacgcga agaatgaagg
    15541 ggtattaatg tcccgtttcg tatttatttt tctgtgtttt atcccatatt tagggagagc
    15601 tgattgttgg gataaggctg gtgaaaggta caacattcca tcgagtttgt taaaagcgat
    15661 tgcggaaaaa gaatccggat ttaataaatt tgcagtcaat gttaataaca atggaagtaa
    15721 agattatggt ataatgcaaa taaatgactt tcattctaaa agacttagag aaatgggata
    15781 tactgaggaa atgctaatta gtcatccatg tctttctgta cattatgcag caaagttatt
    15841 aaatgagttt atgctgatgt atggaagagg gtgggaggct gttggtgcct ataatgcagg
    15901 aacatctccg aaaaagaaaa aagaaagatt aaagtacgca gaggatatct ataaacgcta
    15961 tttgcggata gcagcagaga gcaagcagaa taatcgaagg atataagagg atttatgtct
    16021 gaggcaaaga actcaaatct tgcaccattc aggttattag tgaaactcac aaacggtgtc
    16081 ggggatgagt ttccgttata ttatgggaat aacttaattg ttctcggacg gacgatagaa
    16141 acacttgagt ttggaaacga taatttccca gaaaatatta ttccagtaac agatagtaaa
    16201 tcggatggta taatttattt ggccataagt aaagataata tctgtcaatt tagtgatgaa
    16261 aaaggtgaac aaattgatat caattcacaa tttaactcat ttgaatatga cggagtttct
    16321 tttcaactta aaaatatgat ggaggataaa tcgagagttc atatactaaa cggaatgtat
    16381 aataaaccct cggtgttttt tttctttgct gttattgttg tgttaattat aattttttcc
    16441 ctctctttaa agaaagatga agtaaaagaa attgctgaaa ttatagatga taagagatat
    16501 ggaatagtca acacaggaca gtgcaattat attcttgccg aaacacaaaa tgatgcggta
    16561 tgggcatctg tagccttaaa taaaagcgga tttaccaaat gcagatatat tctggtgtcc
    16621 aacaaagaaa taaatagaat tcaacaatat atcaatcaac gattcccata tatcaatttg
    16681 tatgtgttga atttagtgag tgataaagcg gaattactgg tatttttaag taaagaaaga
    16741 aatagttcaa aagataccga acttgagaaa ttgaaaaatg ctctgatagt tgaatttccg
    16801 tatatcaaaa atattaaatt caactatctt agcgatcata atgcaaggga ggatgctaaa
    16861 ggtattttca caaaggtaaa tgtccagtat aaagagattt gtgaaactaa taaagttaca
    16921 tattctgtca gagaagaact gacagatgaa aagcttgagc tcattaatag actgatttct
    16981 gatcataaaa atgtatatgg agatcagtat attgagtttt ctgtactttt gatagatgat
    17041 gattttaaag gtaaatcata tcttaacagc aaagacagtt atgtaatgtt gaatgataaa
    17101 cactggtttt ttttagataa aaataagtga ggataaaatg agtgttacag taccggataa
    17161 agattggact ctgagttcat tatctgaaac ttttgatgat ggaactcaaa cattacaagg
    17221 gcaactaaca tcggcactaa atgcattagc tgaaaatcct tcgaatccac agttgctggc
    17281 tgaataccaa agtaaattat ctgaatatac attatatagg aacgcgcaat ctaatactgt
    17341 gaaagtgatt aaggatgttg atgctgcaat tattcaaaac ttcagataat agggagcatt
    17401 catgaattac atttatccag tcaatcaggt tgatattatc aaagccagtg attttcaatc
    17461 tcaagagata tcaagcctgg aagacgtcgt gtcggctaaa tatagtgata ttaagatgga
    17521 tacagatatt caagtatcac aaataatgga gatggtaagc catccagaat cattaaaccc
    17581 agaatctttg gccaagttac agacgacgct ctcaaattat tcaataggag tatcattagc
    17641 tggcacgtta gcaagaaaaa cagtttcggc tgttgaaact ttattaaagt cttaatttat
    17701 atgattaggt ataaatgttt tattttattc ttgttgctga tgttgattgg atgtgagcaa
    17761 cgtgaagagt taatttctaa tttatctcaa agacaggcaa atgaaataat atctgtgcta
    17821 gaacgccata atattactgc tagaaaagtt gatggaggta aacaggggat ctcggtacaa
    17881 gtcgaaaagg ggacatttgc atcggcagtt gatttgatgc gcatgtacga tttgccaaat
    17941 ccggagagag ttgatatctc acaaatgttt cctacagatt cattagtgtc ttctccaaga
    18001 gctgaaaagg cccgtttata tagtgctatt gagcaacggc tggaacagtc tttagtttct
    18061 attggtggtg ttatttcggc aaaaatacat gttagctatg atcttgaaga aaaaaatata
    18121 tcttcaaaac cgatgcatat atcagtaatc gctatatatg actcaccgaa agagtctgaa
    18181 ctattagtta gtaatattaa gcgatttttg aaaaacacct tttctgatgt taagtatgaa
    18241 aatatatctg tcatattaac tccgaaagaa gaatatgttt atacaaatgt acaacctgtt
    18301 aaggaaatta aatcggaatt tttaacaaat gaagtaatat atgtatttct cgggatggct
    18361 gtactagttg tcattctttt ggtatgggca ttcaaaacag ggtggttcaa gagaaacaaa
    18421 atatgataag aatggatgga atttataaaa aatatctttc aataattttt gatccagcgt
    18481 tctatataaa tagaaatcgg ttaaatttgc cttctgaact gttagaaaat ggcgtaatca
    18541 gaagtgagat taataatctc ataattaaca aatatgatct aaattgcgat attgaacctt
    18601 taagcggggt aaccgctatg tttgttgcca actggaattt acttccagct gttgcttatt
    18661 ttatcggtag tcaagagtct cggttaatta atcatagtga gatggttatt agttattatg
    18721 ggggcaaaat cagtaagcaa ggggaggccg ctattcgaag tggtttttgg catcttattg
    18781 agtggaagga aaatatatct gttggtatat atgaaagaat aaacttatta tttaatccaa
    18841 ttgctttgga gggaaattat acgcctgtag aaagaaattt gtcccgatta aatgaaggta
    18901 tgcaatatgc aaaaaggcac tttaccggta tccagacatc atgcctatga tggtgttgtt
    18961 ataaagagaa ttgaaaagga attatgtaaa accataaaag atagagacac tgagagtaag
    19021 aagaaagcaa tttgtgttat aaaggatgct acgaaaaaag ctgaatcact gcgtatagat
    19081 gctgtatgcg atggttatca aattggtata cagactgctt ttgagcatat tattgactat
    19141 atttgtgaat ggaagttaaa gcaaaatgaa aacagaagaa atattgagga ctatataact
    19201 agtttgcttt cagaaaattt acatgatgag aggatcatta gcactttatt ggagcagtgg
    19261 cttagttcgt tgcgtaatac agtaacagaa ttaaaagtgg ttttgcccaa gtgtaattta
    19321 gcactgagga aaaagttaga acttgatctc cataaatatc gctcagatgt caagattatt
    19381 ttaaaatatt ctgaagggaa taattatata ttctgtagtg gtaatcaagt agtggagttt
    19441 agtcctcagg atgtaatatc aggtgttaaa atagaacttg cggaaaaatt aacaaaaaat
    19501 gataaaaaat atttcaaaga gttagcacat aagaaactga gacaaattgc agaagacttg
    19561 ttaaaagaga atcctgttaa tgattaatca aataaatgca agcaatgctc tgcagcaaag
    19621 attaaatagt gaagaatttg ttaatttaaa tgagagatta tcatcttcgc aatcatttga
    19681 tgagaatata atctatgaaa taatgcaata tttctcacag agtgaattaa attccataga
    19741 taatgatgaa ctgcacaata agattgaaca attattcaat tcacgttttc cttatcttac
    19801 agctgcacaa aaaagttcac ttcttaataa actcatagat gcaaatcaat atgtcgattt
    19861 gcatgaggga ttttatgcat cattgtccat atataacaat attgatttct atattaagac
    19921 tacaaccttc gattcattaa ttagtgtctt tgaagcaggg agagaggcag atgattcgac
    19981 atggtagtaa taagttgaaa atatttattt taagtatatt gctattaaca ctgagtgggt
    20041 gtgctttaaa gtcatcatct aattctgaaa aagaatggca tattgttcct gtaagtaagg
    20101 attatttttc tattccaaat gatttattat ggtcgtttaa tacaaccaat aaaagtataa
    20161 atgtttactc taaatgtatt agtggtaagg cggtttatag ttttaatgca ggtaaattca
    20221 tgggcaactt taatgttaag gaagtagatg ggtgcttcat ggatgcacaa aagatagcta
    20281 tagataaact attttctatg ctgaaagacg gggttgtttt aaaaggtaat aagataaatg
    20341 ataccatcct tatagagaag gatggggaag ttaaattaaa attaattcga gggatataat
    20401 tgtattgtga gtaaatataa aggtctaaat acaagtaata tgttttacat ttactctagt
    20461 ggacatgaac cagttaacgt tgagcttgta aaagataaag aacgtaacat aattgagctg
    20521 gctccagcat ggaagggttt ttttttgtcc gaaatcaaaa tataaaattc agtgataatg
    20581 tgaactatca ttatcgcttt aacattaata gttgtgcaaa atttcttgct ttttgggact
    20641 atttcagtgg tgctctagta gagcatagcc atgctgaaaa atgtattcat ttctatcatg
    20701 agaatgatct tcgggatagt tgtaataccg aatcgatgct tgataagtta atgttaagat
    20761 tcatcttttc atctgaccag aatgtaagta atgcactggc tatgatacga atgactgagt
    20821 catatcattt ggttctttat cttctgagaa ctattgagaa agaaaaggag gtaagaataa
    20881 agagtctgac agagcattat ggtgtgtcgg aggcttattt tagatcttta tgtagaaaag
    20941 ctttaggggc aaaagtcaaa gaacaactga acacttggcg gttagtaaat ggtttattag
    21001 atgtattttt gcacaatcaa acaatcactt ctgctgccat gaataatggg tatgcatcaa
    21061 catcccattt ttcaaatgag ataaaaacac gactaggctt ttctgcaaga gaattatcga
    21121 atattacttt tttagtgaaa aaaataaatg aaaaaattta atattaaatc tttgactctc
    21181 ttgattgtat tgttaccatt gatagttaat gctaataata ttgactctca tttattagaa
    21241 caaaatgaca tagcgaaata tgttgctcaa agtgatacgg taggatcttt ttttgaacgt
    21301 ttttctgcgt tattaaatta tcctattgtt gttagcaaac aagctgcaaa aaagagaata
    21361 tctggggagt ttgatttatc taatccagaa gaaatgcttg aaaaaatgac attacttgtg
    21421 ggactcatat ggtataaaga tggaaatgca ttatacatat atgactctgg agaattaata
    21481 agcaaagtta ttttgctgga gaatatatca cttaattatc ttattcagta tctgaaggat
    21541 gctaaccttt atgatcacag atatcctata agaggaaaca ttagtgataa aacattctat
    21601 atatctggtc ctccggcatt ggttgaactg gtagctaata cagcaacttt gcttgataag
    21661 caggtttctt ctattgggac agataaagtt aattttgggg ttataaaatt aaaaaataca
    21721 tttgttagtg acagaactta taatatgaga ggggaggata ttgtcatccc aggggtggct
    21781 actgttgtag aacgtttatt aaataatggt aaggctctga gtaacagaca agccaaaaat
    21841 gatccgatgc caccctttaa tattacacag aaagtatctg aggatagtaa tgacttttca
    21901 tttagttcag ttaccaatag ttctatatta gaggatgtat cacttattgc atatccagaa
    21961 accaattcta tattagtcaa aggtaatgat cagcaaatac agattattcg cgatattatc
    22021 actcagttag atgtagccaa acgacatata gaattatcat tatggataat cgatattgat
    22081 aaatctgaat taaataacct tggcgttaat tggcaaggaa cggcttcatt tggtgattcg
    22141 tttggtgcat catttaatat gagctcatca gcatcgataa gcactttgga cggcaataag
    22201 tttattgctt cagttatggc attaaatcag aaaaagaaag caaatgtagt ttcaaggccg
    22261 gtgattttga cacaagagaa tattccggct atatttgata ataacaggac tttttatgtg
    22321 tcattagttg gtgagcgcaa ttcttcgttg gagcatgtta cgtatggaac attgataaat
    22381 gttatacctc gcttttcatc tcagggacaa attgagatgt ctttaacgat agaggatgga
    22441 acaggaaata gtcagtcaaa ttacaattat aataatgaaa atacatctgt ccttccagaa
    22501 gttggaagga ccaaaatcag tacaatagcg agagttccac aaggcaaaag tttgttgata
    22561 ggtggttata cgcatgaaac gaactctaac gaaatagtat ctattccttt tctctcctct
    22621 attcctgtaa tcggtaatgt gttcaagtat aaaacaagga atatcagtaa tattgtaagg
    22681 gtttttctga ttcaaccccg tgagataaag gagtcaagtt attataatac tgcagaatat
    22741 aagagcctca tatctgaaag agaaatacaa aagactacac aaataatccc atctgaaact
    22801 actttgctgg aagacgaaaa atcattggtt tcatacttaa attactaact ataaagtagg
    22861 tgatgtatgc ttgatgttaa aaatacagga gtttttagct ctgcattcat tgataagttg
    22921 aatgcaatga caaattcaga tgatggagat gagactgctg atgcagagct tgattctggc
    22981 ttggctaata gcaagtatat tgactcatct gatgagatgg cttccgctct ttcgtcattt
    23041 ataaacagaa gagaccttga gaaactgaaa ggaacaaata gtgatagtca ggaacgtatt
    23101 ttagatgggg aagaagatga aattaatcac aagatttttg atttaaagag aactttaaaa
    23161 gataaccttc ctctagatca ggattttata gacagactaa agagatattt taaagatcca
    23221 agtgatcaag tcttagcatt aagggaactt ttgaatgaaa aagatcttac tgctgaacaa
    23281 gtcgaatcat taactaaaat tattaatgag ataatatcag gtagtgaaaa aagtgttaat
    23341 gctggaataa attcagctat acaggctaaa ttatttggca acaaaatgaa acttgaacca
    23401 cagcttttgc gtgcatgtta tcgtggtttt atcatgggga acatatcaac aacagatcag
    23461 tatatagaat ggcttggtaa ttttggtttt aatcacagac atacaattgt gaattttgta
    23521 gagcagtcac tgattgtaga catggattct gagaaaccga gctgtaatgc ttatgagttt
    23581 ggttttgtgt tatctaaatt aattgcaatt aagatgatta gaacttcaga tgtaattttt
    23641 atgaagaaac tggaatcctc aagcttgcta aaagatggca gtttaagtgc agagcagcta
    23701 ttgctaactt tattatatat ttttcaatat ccaagtgaaa gtgagcaaat tcttacttct
    23761 gttatagacg tatcacgagc cagtcatgag gattctgtag tgtatcaaac atatctatct
    23821 tctgttaatg aaagtcctca tgatatattt aaaagtgaaa gtgaaagaga aattgcgatc
    23881 aatattctac gagagcttgt cacaagtgca tacaagaaag agctttctag ataacaggag
    23941 atgaaagtga tccagtcttt tcttaagcaa gtaagtacta agcctgaatt aattatatta
    24001 gtgcttatgg ttatgatcat tgctatgttg atcataccat tacctacata ccttgttgat
    24061 tttttaatag ggcttaatat tgtacttgct attctcgttt ttatgggatc attttatatt
    24121 gaaagaatat tgagtttttc tacattccct tcggttttgt tgataacgac attatttcgt
    24181 ctcgctttat caataagtac tagtcgacta attttagttg atgcggatgc gggtaaaatt
    24241 attactacat ttggccagtt tgtcattggt gatagtctgg ctgtaggttt tgttattttt
    24301 tcaatagtaa ctgttgtgca gttcattgtt ataacaaaag gatctgaaag ggttgcggag
    24361 gtagctgctc gcttttctct tgacggtatg ccggggaaac aaatgagcat tgatgcggat
    24421 ttaaaggctg gaattattga tgccgcagga gctaaagaaa gacgcagtat tctggaacgt
    24481 gagagtcaat tgtatggttc atttgatgga gcaatgaagt tcattaaagg tgatgcaatt
    24541 gctggcatca ttattatttt tgtcaattta ataggaggta tttctgttgg tatgagtcaa
    24601 catggaatgt ctctatctgg tgcattatct acttatacca tactaactat tggtgacgga
    24661 ttggtctctc agattcctgc tctgttaatt tctataagtg caggatttat cgttacaaga
    24721 gttaatggtg atagcgataa tatgggacgt aacataatgt cccagatatt tgggaatcct
    24781 tttgttctca ttgttacatc agctcttgcc ttggcgatag ggatgttgcc aggttttccg
    24841 ttttttgttt ttttcctgat agcagttact ttgacggctt tattctatta taaaaaggtc
    24901 gtagaaaaag aaaaaagtct gtctgagtct gattctagtg gctatactgg tacatttgat
    24961 attgataata gccatgactc atctttggca atgatagaaa atctggatgc tattagttca
    25021 gaaaccgttc ctttaatttt attatttgcc gaaaataaga taagtgcaaa tgatatggaa
    25081 ggtcttattg aaaggataag aagtcagttc tttattgatt atggtgtcag gcttccaact
    25141 attttatata gaacaagcaa tgagcttaag gtcgatgata ttgttttgtt aataaatgag
    25201 gtgcgtgccg atagttttaa tatatacttt gacaaagtgt gtattacaga tgaaaatgga
    25261 gatatagatg ctctaggtat tcctgttgtt tcaacttcat ataatgaacg tgttatttct
    25321 tgggtagacg tttcatatac agaaaatcta actaatattg atgctaaaat taaaagtgct
    25381 caagatgaat tttatcacca gttgtcacaa gctttattaa acaacataaa tgagattttt
    25441 ggtatacaag aaacaaaaaa tatgttagat cagtttgaaa atcggtatcc tgatctatta
    25501 aaggaagtct tccgacatgt gactatacag agaatttctg aggtattaca aagattgctt
    25561 ggagaaaata tttctgttcg caatttaaaa cttattatgg agtctttggc gctttgggct
    25621 cccagagaaa aagatgtcat aacattagtt gaacatgtcc gtgcatcact ttctaggtat
    25681 atttgtagta aaatagctgt ttctggtgag attaaagttg tgatgctttc cggatatatt
    25741 gaggatgcaa taagaaaagg gataaggcaa acctctggtg gctctttctt gaatatggat
    25801 atagaggttt cggatgaggt aatggaaact ttagcacatg ctttgagaga attgagaaat
    25861 gcaaaaaaaa atttcgttct tttggtatca gtagatatac gtaggtttgt taaaagactt
    25921 atagataaca gatttaagag tatactcgtt atatcgtatg ctgagattga tgaagcatat
    25981 accattaatg tattaaagac tatttagtga ggtttaaata tgagtaacat taatttagtt
    26041 caattagtta gagatagtct tttcacgatt ggttgtcctc catcaattat tacagattta
    26101 gacagccatt cagcgattac catttctttg gatagtatgc ctgctattaa tatagctctt
    26161 gtcaatgagc aggttatgtt atgggctaat ttcgatgcac caagtgatgt aaaacttcag
    26221 tcatctgctt ataacatatt aaatttaatg ttaatgaact ttagttatag cattaatgag
    26281 ctggtagagc ttcatcgttc tgatgagtac ttacagttaa gagttgttat taaagatgac
    26341 tacgttcacg atgggattgt ttttgcagag attctgcatg agttttatca gaggatggaa
    26401 atcttaaatg aggtcttata atcaatgagc tatataaaat tgctcactca attatctttt
    26461 cctaatagaa tctcggggcc aatcttggaa acaagtctta gcgatgtttc gattggtgag
    26521 atttgtaaca ttcaggctgg aattgaaagt aatgaaatta ttgcaagagc tcaggttgta
    26581 ggatttcatg atgaaaaaac aatattaagc ttgattggaa attctcgtgg actttcaagg
    26641 caaacgttga ttaagcccac tgcccagttt cttcatacgc aagtcggccg tggattattg
    26701 ggagcagtag tcaatccttt aggggaggtt actgataagt ttgctgttac ggataacagt
    26761 gaaattcttt atcgacctgt agataatgct cctccgctat atagtgaaag ggctgcaatt
    26821 gagaagcctt ttttaacagg tgttaaggtt attgattctt tactcacgtg tggtgaagga
    26881 cagcgaatgg ggatttttgc gtcagctggt tgtggcaaaa cttttctcat gaatatgctc
    26941 attgaacata gtggtgctga tatatatgtt attgggttaa ttggtgagcg aggtcgagag
    27001 gttacagaaa cggttgatta tttgaagaac tctgagaaaa aaagcaggtg tgttttagta
    27061 tatgcaactt cggattactc ttcggttgat cgttgtaatg ctgcatatat agccactgct
    27121 atagccgaat tttttaggac tgaaggacat aaagtagcgc tttttattga ttcattaaca
    27181 aggtatgcca gagcattacg tgatgtggcc ttagccgctg gagaatcacc tgccagaaga
    27241 ggctatccgg tttcggtttt tgatagctta cccagacttc ttgaaaggcc aggaaagtta
    27301 aaggcaggtg gctctattac tgcattttac actgttcttt tggaggatga tgattttgct
    27361 gatccattag ctgaagaggt aagatccatt ttagatggac atatatattt gagcagaaat
    27421 ctagcccaaa aaggacaatt tcctgcaatt gattccttaa aaagtataag cagggtattt
    27481 acacaggttg ttgatgaaaa acatcgtatt atggccactg catttcggga gctactttct
    27541 gaaatagaag agctaaggac aattattgac tttggtgaat acaaaccggg ggagaatgcc
    27601 tctcaggata aaatctacaa caaaatatct gttgttgaga gttttctgaa gcaagattat
    27661 cgactcggtt ttacttatga gcagacaatg gagcttcttg gtgaaacaat tagataaggt
    27721 tttaaaaatc aaagataaat atcaacggtc tgttaaatta attgaagcac acatattaac
    27781 actaaaaaaa aaactctttg tatcgagatg tggaggcatt agataaaagg attatatact
    27841 tcctgcaact ggagaatgac ttggaacctg taggcgctca gagtgttagt cagcttttca
    27901 atacaagacg taagatcgct atagtaaaaa agcatattat ccaatatcag tctgaacgaa
    27961 ttcttctaaa gggaagaatt gaagaaattc aaaaagatat tgatgaggca aatgcttcta
    28021 aaagaaaact gcttcataaa gagagtaaaa tatgtaaacg gattggcttg attaaaagaa
    28081 ataactttgc caaacagttg atacttgatg agttatcaca agaggatatg aagtatggca
    28141 ttagataata taaacctaaa ttttagtagt gacaaacaga tagaaaaatg tgagaaacta
    28201 tcttcaatag ataatattga tagtctcgtt ttgaagaaga agaggaaggt tgaaattcct
    28261 gagtactctt taattgcatc taactatttt actattgata agcactttga acataagcat
    28321 gataaaggag aaatttatag tggcattaaa aatgcgttcg aacttagaaa cgaacgagcg
    28381 acatattctg atattccaga atcaatggcc attaaagaaa atattttgat accagatcaa
    28441 gatatcaaag caagggaaaa aataaatatc ggcgatatga gggggatctt ttcatataat
    28501 aagagtggaa atgcagacaa gaacttcgaa agaagtcata cttcttctgt aaaccctgat
    28561 aatctgctag aatctgataa tagaaatggt caaattggtt taaaaaatca tagcttgtct
    28621 attgataaga atattgctga catcatttct ttactaaatg gaagtgttgc taaatcattt
    28681 gagctgcctg taatgaataa aaatactgca gacataaccc catccatgtc attgcaagaa
    28741 aaatcaatag ttgaaaatga taaaaatgtt tttcaaaaaa atagtgaaat gacttaccac
    28801 tttaaacagt ggggggctgg acattctgtt agtatttcag tggagtctgg ttcttttgtt
    28861 ctaaaaccgt cagatcaatt tgtaggaaat aaacttgact taattttgaa acaagatgct
    28921 gagggtaatt acagatttga tagcagtcaa cataataagg ggaataaaaa taatagtaca
    28981 ggatataatg aacagagtga agaagaatgc taagaattaa acattttgac gctaacgaaa
    29041 aactacagat tttatatgca aagcaactct gcgagcgttt ttcgattcag acattcaaaa
    29101 ataaatttac aggcagtgaa agtttagtca ctcttacttc cgtgtgtggg gattgggtaa
    29161 ttcgtattga tacattatct tttttgaaaa aaaaatacga ggtattttca ggattttcta
    29221 cacaagaatc tttactgcat ttatcaaaat gtgtctttat agagtcgtca tctgtatttt
    29281 cgattccaga actgtctgat aagattactt tccggatcac gaatgaaatc cagtatgcaa
    29341 ctactgggag tcatttatgc tgtttttcct cttctttagg tattatttat tttgacaaga
    29401 tgccggtatt acgtaatcaa gtttctcttg acttattgca tcatctttta gagttttgct
    29461 taggttcatc taatgtaagg ctggctactt taaaaagaat tcgtactggt gatataatca
    29521 tagttcagaa actttataat ttattattgt gtaatcaagt tattattggg gattatattg
    29581 tgaatgataa taatgaggca aaaattaatc tgtcagaaag taatggtgag tcagatcaca
    29641 cagaagtttc tttggcatta ttcaattatg atgatatcaa tgtaaaagtc gactttatcc
    29701 ttttagaaaa aaagatgaca atcaatgaac taaaaatgta tgtagaaaac gaattattca
    29761 agtttcccga tgacatagtt aaacatgtaa atattaaagt aaatggttct ttggttgggc
    29821 atggggaact tgtttctatt gaggatggtt atggtatcga gattagttct tggatggtaa
    29881 aggagtaatc tcatgctgag tgatatgtcc ctcatcgcta cactttcttt ttttacgcta
    29941 ttaccatttt tagttgctgc tggtacttgt tatataaagt tttctattgt ttttgtaatg
    30001 gtacgaaatg cacttggttt gcagcaggtt ccatcaaata tgactctcaa tggtattgca
    30061 ttgattatgg ctttgttcgt gatgaaaccc attattgaag ctggttatga aaattatcta
    30121 aatggcccgc aaaaatttga tacaatatca gatattgtcc gtttttctga ttctggcttg
    30181 attgaataca agcaatactt gaaaaagcat acagatcttg agttggcacg ttttttccaa
    30241 aggtctgaag aagaaaatgc tgatttaaag agtgcagaga ataatgatta ttcattgttt
    30301 tccctcttgc ctgcatatgc gctaagtgaa attaaagatg cgttcaaaat aggtttttat
    30361 ttatatttgc catttattgt tgttgatctt gttatttcaa gcattttact tgcacttggt
    30421 atgatgatga tgagtccaat cacaatatca gtaccaataa aacttgtatt atttgttgcg
    30481 cttgatgggt gggggatcct gtctaaggcc ttgattgaac aatatatcaa tgttcctgct
    30541 tagatgatgg aggtaatgtg tctgatatag tttatatggg taataaggct ctttatttaa
    30601 tccttatctt ttccttatgg ccagtaggta tagctacggt tattggatta actattggtt
    30661 tattacagac agtgactcaa cttcaagagc agacacttcc ttttggtata aagcttatag
    30721 gtgtctcaat atctttgcta cttctttctg gatggtatgg tgaggtttta ttgtcttttt
    30781 gtcatgaaat aatgttttta attaagagtg gggtttgatg gacatttcaa gctggttcga
    30841 aagtattcat gtgtttttaa tactcctgaa cggcgttttt tttagattgg ctccattatt
    30901 tttctttctt ccatttttaa ataacggtat aatttctcca tctattagaa tacctgtgat
    30961 ttttcttgtt gcatcaggat taattacttc tggtaaggta gacataggtt cttctgtttt
    31021 tgaacatgtt tatttcctta tgttcaagga aataattgtt ggcctccttc tctctttttg
    31081 cttgtctctt cccttttgga tatttcatgc tgttggtagt attattgaca accagcgtgg
    31141 ggcaacgctt agtagttcaa ttgatcctgc caatggtgtt gatacgtctg aattggcaaa
    31201 atttttcaat cttttttctg cagttgtatt tctatacagt ggtggaatgg tctttatttt
    31261 agaatccata caattgtctt ataatatatg cccgttattt tctcaatgtt ctttccgtgt
    31321 ctcaaatatc ttaacatttc tgactttatt ggcaagtcag gctgttattt tagccagtcc
    31381 tgttatgata gtattgttac tatcagaagt attacttggt gtattatcga gatttgctcc
    31441 gcagatgaat gctttttccg tatcattaac tattaaaagt ttacttgcaa tatttattat
    31501 tttcatctgt tcttctacta tttacttttc taaagttcaa tttttcctcg gtgaacataa
    31561 atttttcaca aatctatttg ttagataaaa tattatggca aataaaacag aaaagccgac
    31621 acctaaaaaa ctaaaggatg ccgcaaaaaa aggacagtca tttaaattta aggatttaac
    31681 gacagttgtt attattctgg tagggacatt tactataata tcattctttt ccttaagtga
    31741 tgtaatgctc ttatacagat atgtaataat taatgacttc gaaattaatg agggtaaata
    31801 cttttttgca gtggttattg tcttttttaa gataattggc ttcccacttt ttttctgtgt
    31861 tctttcggct gtgttgccaa cattggttca aacaaagttt gttcttgcga ctaaagctat
    31921 caagattgat ttttcagtat taaaccctgt taaagggtta aaaaaaatat ttagtataaa
    31981 gacaataaaa gaatttttca aaagcattct gcttcttatt attctagcat taacaaccta
    32041 tttcttttgg attaatgacc gaaaaataat tttttctcag gtgttttcta gtgttgatgg
    32101 cttatatctt atttgggggg ggctatttaa ggatataata ttatttttct tagcattttc
    32161 tatttttgtt attattcttg actttgtgat tgagttcatt ttatacatga aagatatgat
    32221 gatggataaa caggagataa aaagagaata tatagagcaa gagggacact ttgagacaaa
    32281 gtcgagaagg cgtgagttgc atatcgagat tctttcagag cagactaaat ctgatatacg
    32341 taattcaaaa ttagtggtaa tgaacccgac tcatattgca attggtattt attttaatcc
    32401 agaaatagcg cctgcacctt ttatttctct cattgaaact aaccagtgtg ccttggctgt
    32461 cagaaaatat gcaaatgaag ttggtatacc aactgtgcgt gatgtgaaat tagctagaaa
    32521 actatataaa acacatacaa aatatagttt tgttgatttt gaacacttgg atgaagtcct
    32581 acgtcttatt gtttggcttg agcaggttga aaacactcat taataagtaa aggagatgtg
    32641 ttatatggga gttaatttct gtaataaaat aggtattgat cagtctgaat ttgaaataga
    32701 atcttccatc attaactcca ttgctaatga ggtattgaac ccaatatctt tccttagcaa
    32761 caaggatata ataaatgttt tactcagaaa gatttcatct gaatgtgacc tggttagaaa
    32821 agacatttat cgttgtgctc ttgagttggt cgttgaaaaa acacctgatg atttataatc
    32881 attcataata actcttttgt tgatataaat atttttgttg aagatattta tgtagtcaca
    32941 ggatcaattg tagaaaattg ttatgttttt gttaggaact gaactaaata atatatgata
    33001 agacagcaaa aacgactgac cataatcctt cttttattag gagttgataa gagagactat
    33061 tcatcctgta atgttaaaac tctgttatat agtattcgcg attatgcaaa gtctgtaaat
    33121 gatcatgaga tactaaccga gagtaatcgt ttattatctc attgcatttc agatagtaac
    33181 ggagctttct ttaaaagtag taaatacgtt ccccttaagt acttacgtaa aaggagaata
    33241 gcacgaaaga taccaaatga ttagcacttt gctagtaagc ttgctggtaa actatattga
    33301 ccgttgggtt tgttttgaga ctgtaattta aattgtgtaa ttgcctgttt ttgatatgtt
    33361 tactccaaca acggagacag gtaaattatg gacgaaaaga agcttaaagc ccttgcggct
    33421 gaactggcta aaggcctcaa aactgaggcc gacctcaatc agttttcccg tatgctgacg
    33481 aaatatcccg gctcttaaaa cgatagtggc tcaggctttc atttttcagc gttccccaga
    33541 agatttccat cggagcgttg tcgtaacagt tacctttacg cgacattgat gttttcagac
    33601 cagactgctc ctgtatgacc cggtaatcgt atgcgcagta ctgtgaacct cgatcggtgt
    33661 ggtggattag cccggcaggt gggcgctgg
//
LOCUS       DADKRT010000023        32956 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.023, whole genome shotgun sequence.
ACCESSION   DADKRT010000023 DADKRT010000000
VERSION     DADKRT010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 32956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32956
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.023"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..257
                     /locus_tag="JQ356_000935"
     CDS             <1..257
                     /locus_tag="JQ356_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HAY4621103.1"
                     /translation="LDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVV
                     MTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN"
     gene            267..1641
                     /gene="gspE"
                     /locus_tag="JQ356_000936"
                     /pseudo
     CDS             267..1641
                     /gene="gspE"
                     /locus_tag="JQ356_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
     gene            1631..2833
                     /gene="hofC"
                     /locus_tag="JQ356_000937"
     CDS             1631..2833
                     /gene="hofC"
                     /locus_tag="JQ356_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
                     /protein_id="HAY4621104.1"
                     /translation="MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLS
                     LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH
                     DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK
                     SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW
                     LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA
                     GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTG
                     EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL
                     GDAMSGMG"
     gene            complement(2868..3911)
                     /gene="guaC"
                     /locus_tag="JQ356_000938"
     CDS             complement(2868..3911)
                     /gene="guaC"
                     /locus_tag="JQ356_000938"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HAY4621105.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSDQSW
                     SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS
                     TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
                     RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVQEQENRIFNNL"
     gene            4136..4756
                     /gene="coaE"
                     /locus_tag="JQ356_000939"
     CDS             4136..4756
                     /gene="coaE"
                     /locus_tag="JQ356_000939"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HAY4621106.1"
                     /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
                     PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ
                     ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
     gene            4756..5499
                     /gene="zapD"
                     /locus_tag="JQ356_000940"
     CDS             4756..5499
                     /gene="zapD"
                     /locus_tag="JQ356_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HAY4621107.1"
                     /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF
                     RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL
                     ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
                     LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
                     KSRFAIRFMPLDSENGQVPERLDFELACC"
     gene            5509..5706
                     /gene="yacG"
                     /locus_tag="JQ356_000941"
     CDS             5509..5706
                     /gene="yacG"
                     /locus_tag="JQ356_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HAY4621108.1"
                     /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIPSSGDLSESDDWSEEPKQ"
     gene            complement(5813..6202)
                     /gene="mutT"
                     /locus_tag="JQ356_000942"
     CDS             complement(5813..6202)
                     /gene="mutT"
                     /locus_tag="JQ356_000942"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HAY4621109.1"
                     /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
                     TPEQAVVRELQEEVGITPQHFSLFEKLAYEFPDRHITLWFWLVESWEGVPWGKEGQPG
                     EWMSLVGLNADDFPPANEPVIAKLKRL"
     gene            complement(6262..8967)
                     /gene="secA"
                     /locus_tag="JQ356_000943"
     CDS             complement(6262..8967)
                     /gene="secA"
                     /locus_tag="JQ356_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HAY4621110.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK
                     GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
                     RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
                     RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
                     PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
                     RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
                     LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
     gene            complement(9029..9541)
                     /gene="secM"
                     /locus_tag="JQ356_000944"
     CDS             complement(9029..9541)
                     /gene="secM"
                     /locus_tag="JQ356_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414639.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HAY4621111.1"
                     /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNVPA
                     KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQYAIRTVIRHLSFAMAPQTL
                     PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ
                     GIRAGPQRLT"
     gene            complement(9772..10689)
                     /gene="lpxC"
                     /locus_tag="JQ356_000945"
     CDS             complement(9772..10689)
                     /gene="lpxC"
                     /locus_tag="JQ356_000945"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000595491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HAY4621112.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
                     FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFIAYKSGHALNNKLLQAVL
                     AKQEAWEYVTFQDDAELPLAFKAPSAVLA"
     gene            complement(10790..11941)
                     /gene="ftsZ"
                     /locus_tag="JQ356_000946"
     CDS             complement(10790..11941)
                     /gene="ftsZ"
                     /locus_tag="JQ356_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HAY4621113.1"
                     /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD"
     gene            complement(12002..13264)
                     /gene="ftsA"
                     /locus_tag="JQ356_000947"
     CDS             complement(12002..13264)
                     /gene="ftsA"
                     /locus_tag="JQ356_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017374018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HAY4621114.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(13261..14091)
                     /gene="ftsQ"
                     /locus_tag="JQ356_000948"
     CDS             complement(13261..14091)
                     /gene="ftsQ"
                     /locus_tag="JQ356_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HAY4621115.1"
                     /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
                     VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
                     LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
                     YGPEGSANEVLQGYREMGQMLAKDRFTLKETAMTARRSWQLTLNNDIKLNLGRGDTMK
                     RLARFVELYPVLQQLAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
                     "
     gene            complement(14093..15013)
                     /locus_tag="JQ356_000949"
     CDS             complement(14093..15013)
                     /locus_tag="JQ356_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY4621116.1"
                     /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
                     VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE
                     NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS
                     DETQYFCPAGLDASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(15006..16481)
                     /gene="murC"
                     /locus_tag="JQ356_000950"
     CDS             complement(15006..16481)
                     /gene="murC"
                     /locus_tag="JQ356_000950"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HAY4621117.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
                     QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFLGTGRRFDFLGEF
                     PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
                     DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
                     APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
     gene            complement(16535..17602)
                     /gene="murG"
                     /locus_tag="JQ356_000951"
     CDS             complement(16535..17602)
                     /gene="murG"
                     /locus_tag="JQ356_000951"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HAY4621118.1"
                     /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
                     MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
                     PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
                     GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
                     LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
                     AASIPDATERVANEVSRAARA"
     gene            complement(17599..18843)
                     /gene="ftsW"
                     /locus_tag="JQ356_000952"
     CDS             complement(17599..18843)
                     /gene="ftsW"
                     /locus_tag="JQ356_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HAY4621119.1"
                     /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY
                     DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
                     PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI
                     ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVVFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     MLLRIDYETRLEKAQAFVRGSR"
     gene            complement(18843..20159)
                     /gene="murD"
                     /locus_tag="JQ356_000953"
     CDS             complement(18843..20159)
                     /gene="murD"
                     /locus_tag="JQ356_000953"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HAY4621120.1"
                     /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
                     DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELS
                     SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
                     MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
                     QVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
                     QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
     gene            complement(20162..21244)
                     /gene="mraY"
                     /locus_tag="JQ356_000954"
     CDS             complement(20162..21244)
                     /gene="mraY"
                     /locus_tag="JQ356_000954"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HAY4621121.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL
                     VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
                     TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(21238..22596)
                     /gene="murF"
                     /locus_tag="JQ356_000955"
     CDS             complement(21238..22596)
                     /gene="murF"
                     /locus_tag="JQ356_000955"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HAY4621122.1"
                     /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
                     GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
                     ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP
                     LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
                     ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK
                     QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG
                     TC"
     gene            complement(22593..24080)
                     /gene="murE"
                     /locus_tag="JQ356_000956"
     CDS             complement(22593..24080)
                     /gene="murE"
                     /locus_tag="JQ356_000956"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HAY4621123.1"
                     /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
                     HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHELAGLVEQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKV
                     IDVNYHDSGVTIRFSSSWGDGEIESHLIGAFNVSNLLLALATLLALGYPLADLLKTAA
                     RLQPVCGRMEVFTVPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
                     AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA"
     gene            complement(24067..25833)
                     /locus_tag="JQ356_000957"
     CDS             complement(24067..25833)
                     /locus_tag="JQ356_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HAY4621124.1"
                     /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
                     LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALTTGDKNEFVINQGEGTGGRS"
     gene            complement(25849..26214)
                     /gene="ftsL"
                     /locus_tag="JQ356_000958"
     CDS             complement(25849..26214)
                     /gene="ftsL"
                     /locus_tag="JQ356_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HAY4621125.1"
                     /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(26211..27152)
                     /gene="rsmH"
                     /locus_tag="JQ356_000959"
     CDS             complement(26211..27152)
                     /gene="rsmH"
                     /locus_tag="JQ356_000959"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HAY4621126.1"
                     /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF
                     AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL
                     GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
     gene            complement(27154..27612)
                     /gene="mraZ"
                     /locus_tag="JQ356_000960"
     CDS             complement(27154..27612)
                     /gene="mraZ"
                     /locus_tag="JQ356_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HAY4621127.1"
                     /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
     gene            complement(28214..29218)
                     /gene="cra"
                     /locus_tag="JQ356_000961"
     CDS             complement(28214..29218)
                     /gene="cra"
                     /locus_tag="JQ356_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HAY4621128.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANAPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
                     SYEREAAAQLFEKWLETHLMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
                     "
     gene            complement(29300..29386)
                     /locus_tag="JQ356_000962"
     CDS             complement(29300..29386)
                     /locus_tag="JQ356_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fruR/shl operon leader peptide"
                     /protein_id="HAY4621129.1"
                     /translation="MCNLQPNMSRWAFFAKSVGTWNKSSCRS"
     gene            complement(29398..29889)
                     /gene="ilvN"
                     /locus_tag="JQ356_000963"
     CDS             complement(29398..29889)
                     /gene="ilvN"
                     /locus_tag="JQ356_000963"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HAY4621130.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
                     RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIREVAKIVEVARSGVVGLSRGDK
                     IMR"
     gene            complement(29892..31616)
                     /gene="ilvI"
                     /locus_tag="JQ356_000964"
     CDS             complement(29892..31616)
                     /gene="ilvI"
                     /locus_tag="JQ356_000964"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025294.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HAY4621131.1"
                     /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID
                     HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ
                     VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD
                     LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVVAKKPVVYVGGGAI
                     MAGCHQQLKETVEALNLPVVSSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI
                     FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPISISKTVTADIPIVGDARQVLEQMLEL
                     LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT
                     SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS
                     IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA
                     EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
                     WLSKTERT"
     gene            31735..31779
                     /locus_tag="JQ356_000965"
     CDS             31735..31779
                     /locus_tag="JQ356_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621132.1"
                     /translation="MKRNDKILHYEGLN"
     gene            complement(31934..32878)
                     /gene="leuO"
                     /locus_tag="JQ356_000966"
     CDS             complement(31934..32878)
                     /gene="leuO"
                     /locus_tag="JQ356_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
                     /protein_id="HAY4621133.1"
                     /translation="MPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
                     SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ
                     ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR
                     FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL
                     PLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR"
BASE COUNT         7912 a         9256 c         8017 g         7771 t
ORIGIN      
        1 gattagatac ctgcgacggt ggcagcaatg gcattccctc gcctaccacc acccgctatg
       61 tttcagccat gagtgtggca aaaggcgtgg tgtcgctgac cgggcaagaa agtctcaatg
      121 gactaagcgt cgtcatgacg ccaggttggg ataacgcaaa cggcgtcacc ggctgggcgc
      181 gcaactgcaa tattcaaagt gacagcgcat tgcagcaagc ctgcgaagat gtcttccgct
      241 ttgatgacgc caactaagga gcggcaatga atattccaca gctcaccgcc ctgtgtctgc
      301 gttatcaggg agtcttgctg gatgccagcg aagaggtggt tcatgttgcg gtagtcgatg
      361 caccttcgca tgagttgctg gacgcattgc atttcgctac caccaaacgt attgagatca
      421 cctgctggac gcgccaacaa atggaaggcc acgccagtcg cacacaacag acattgcccg
      481 tagctgttca ggagaagcat cagtcgaaag cagagttgct gactcgaacg ttacaatctg
      541 cgctggaaca acgtgcgtct gatattcata tcgaaccagc ggacaatgcc taccgcatcc
      601 gcttgcgtat cgacggcgta ttgcatcctt taccggatgt ttcaccggat gccggagtcg
      661 cattaaccgc cagattaaaa gtgctgggaa acctggatat tgcggaacat cgcctgccgc
      721 aggacgggca attcactgtc gaactggcag gaaacgccgt ctcatttcgt attgcgacct
      781 taccatgtcg gggtggtgaa aaggtggtat taaggttgtt acagcaggtg aaccaggcac
      841 tggatgttaa cacgctggga atgcagccgt tacaactggc ggactttgct catgccttgc
      901 aacaaccaca gggactggtg ctggtaactg gccctacagg cagcggcaaa acggtcacgc
      961 tttatagtgc cctgcaaaag ctgaataccg ctgacattaa tatttgtagc gtcgaagatc
     1021 cggttgagat ccccatagcc ggactaaacc agacgcaaat ccatccgcgt gccgggctca
     1081 cctttcaggg cgttttgcgt gcgttattgc gccaggatcc tgacgtcatc atgatccgat
     1141 ggcgaaacgg cagaaattgc cattaaagcc gcgcaaaccg gtcacctggt gttgtctacc
     1201 ctacacacta attccacctg cgaaacgctg gtacgtttac agcaaatggg agtcgcccgc
     1261 tggatgctct catcagcgct tacgctggta atagcccagc gtctggtacg taaattttgc
     1321 ccacattgtc gccagcagca aggggagccc atccatattc cagacaatgt atggccgtcg
     1381 ccgctgcccc actggcaggc acccggttgt gtacattgct accacggttt ttatggtcgt
     1441 accgccttgt ttgaagtcct gcccattaca ccagccatac gccagcttat ttccgctaat
     1501 accgacgttg aatcgctgga aacgcacgca cgacaggcgg gtatgcgtac gctttttgaa
     1561 aacggctgcc tagccgtgga gcaaggctta accacctttg aagagttaat ccgcgtactg
     1621 gggatgccgc atggcgagta agcaactctg gcgctggcat ggcataaccg gcgacggcaa
     1681 tgcgcaagat gggatgctat gggcagagag ccgtgctttg ctgctcatgg cactacagca
     1741 acagatggtt accccactta gcctgaagcg aatcgccatc aattctgcgc agtggcgagg
     1801 agataaaagc gcggaagtca ttcatcaact ggcgacgcta ctcaaagccg ggttaacgct
     1861 ttctgaaggg ctggcactgc tggcggaaca gcatcccagt aagcaatggc aagcgttgct
     1921 gcaatcgctg gcgcacgatc tcgaacaggg cattgctttt tccaatgcct tattaccctg
     1981 gtcagaggta tttccgccac tctatcaggc gatgatccgc acgggtgaac tgaccggtaa
     2041 gctggatgaa tgctgctttg aactggcgcg tcagcaaaaa gcccagcgtc agttgaccga
     2101 caaagtgaaa tcagcgttac gttatcccat catcatttta gcgatggcaa tcatggtggt
     2161 tgtggcaatg ctgcattttg ttctgccgga gtttgccgct atctataaga ccttcaacac
     2221 cccactaccg gcactaacgc aggggatcat gacgctggca gactttagtg gcgaatggag
     2281 ctggctgctg gtgttgttcg gctttctgct ggcgatagcc aataagttgc tgatgcgccg
     2341 accgacctgg cttatagtgc ggcagaaatt gctgttacgc atcccgatta tgggttcact
     2401 gatgcgggga caaaaactca cgcagatctt tacgattctg gcgctgacac aaagtgcagg
     2461 cattactttt ttgcagggcg tagagagcgt cagagaaaca atgcgctgcc cgtactgggt
     2521 gcaacttctg acacaaatcc agcacgatat cagtaacggt catcccatct ggctggcgct
     2581 aaaaaatacc ggggagttta gcccgctctg tttgcaatta gtgagaacag gagaggcatc
     2641 cggctcgctg gacctcatgt tagacaacct cgcccatcat catcgggata acacaatggc
     2701 gctggcggat aacctcgcag ccttactgga accggcgttg ctgatcataa cgggaggaat
     2761 tatcggtacg ctggtggtgg cgatgtatct gccaattttc catttaggcg atgcgatgag
     2821 tgggatggga taacgctggc gtgttgctcc acaccagcgt tgaaagatta caggttgttg
     2881 aagatgcggt tttcttgttc ctgcacacgg ataaatgtgg tgcgcttggt cagttctttc
     2941 aggcgtgaag ccccaacgta tgtacaagct gaacgcaggc cgcccaaaat atcacgcgcg
     3001 gtattttcaa ccgggcctcg cagcggcagc ttaacggttt taccttctgc tgcgcgatat
     3061 tccgcaacgc cgccaacgtg acgtttcatc gcagactcgg agctcatgcc gtagaacagc
     3121 ataaatttct cgccgttctc ctcaacgatg cgaccgccgc tctcttcgtg gcccgccagc
     3181 atgccgccaa gcatgacgaa atcggcaccg ccgccaaagg cttttgcgac atcgcccggc
     3241 gtggtgcagc caccgtcgct gacgatcatt ccgcccagac cgtgcgccgc atcggcacat
     3301 tcgattaccg cagaaagctg cggataaccg acgcctgttt tgacgcgagt tgtacaaaca
     3361 gaacctgggc caatgccaac tttaacgata tcagcaccgg agaggataag ctcctcacac
     3421 atttcaccag tcactacgtt gccagcacaa atggttttgg tcggccacgc ttcacgcgct
     3481 ttcgcaacga actgcacgaa gtgttcggaa taaccattcg ccacatcaat acaaacaaag
     3541 tttaatgccg ggttcaggtc gagaatctgt ttagtttttt cgaaatccgc atcagacgta
     3601 ccggtagaaa ccatcacatg tttcagcaca tcagcggaag aattgttgat aaacgcttgc
     3661 cactcttcga cagaatagtg tttatgcaca gcagtcaaaa tatcaaaaga agccagcgca
     3721 gaggccatag aaaatgtacc tacggtgtcc atatttgcgg cgataatcgg cacgccggac
     3781 cagctctgat ctgaatgttt gaaggtgaat tgacgttcca gttcaacatc ggaacggctt
     3841 ttaagagtgg agcgtttagg gcggatgaga acgtctttaa aacctaactt cagatcttct
     3901 tcaatacgca tgtgcggatt cctggggtta atggctataa gggtaagagc gcaactccag
     3961 tgacgctatc atacgcacta atcaatgcgg cgcaagactg cgaaattgtc tttttttacg
     4021 ctacaatccc ataaatttac ctggtaaata gtgagcgaac gtttcatcaa tttcgctttc
     4081 gtgcactcat ttttaacgtt ttgataatca tgatgaattc ccgggaatat aaattatgag
     4141 gtatatagtt gccttaacgg gaggcattgg cagtggcaag agtaccgttg ccaatgcgtt
     4201 tgctgatctc ggaattaacg tcattgatgc cgatattatt gcgcgtcagg tggttgaacc
     4261 aggtgcacct gcgctacatg ccattgctga tcactttggc gctaacatga ttgctgctga
     4321 tggaacattg cagcgccggg ccttgcgcga gcggatcttc gccaacccgg aagagaaaaa
     4381 ctggcttaac gccctgctgc atccgctgat tcagcaagag acgcaacacc agatccagca
     4441 agctacttcc ccctatgtac tgtgggttgt gccattgctg gtagaaaact cactgtataa
     4501 aaaagcgaat cgagtgctgg tggtggatgt cagcccagaa acgcaactta agcgcaccat
     4561 gcagcgcgat gatgtaactc gcgagcatgt cgaacaaatc cttgctgctc aggcaacgcg
     4621 cgaagcccgc cttgccgtgg cagatgacgt cattgataat aacggcgcac cggatgctat
     4681 cgcatcggat gttgcccgcc tgcacgcaca ctatttgcag cttgcgtcgc agtttgtctc
     4741 acaggaaaaa ccgtaatgca gacccaggtc ctttttgaac atccactaaa tgaaaaaatg
     4801 cgtacatggc tgcgcattga gtttttgatt cagcaactca ccgttaattt acccatcgtt
     4861 gaccacgctg gcgcgctgca tttcttccgt aatgtcagtg aattactgga tgttttcgag
     4921 cgcggcgaag tccgcactga gctgttgaaa gaacttgacc ggcagcaacg taaactccag
     4981 acctggattg gcgtgcctgg cgtggaccag agccgtattg aagcattaat tcagcagtta
     5041 aaagcggcgg ggagcgtatt aatttccgcg ccgcgtatcg ggcaatttct gcgtgaagat
     5101 cgtttgattg ctctggtgcg tcagcgactg agcatcccag gcggctgttg cagctttgat
     5161 ttacctacat tgcacatttg gctgcatcta ccccaggcgc agcgcgacag ccaggtagaa
     5221 acctggattg ccagcctgaa cccgctcacc caggcactta ccatggtgct ggatttaatt
     5281 cgccagtcgg cccccttccg taaacaaacc agcctgaatg gtttttatca ggataacggt
     5341 ggcgatgccg acttgctgcg cctgaatctg tcgctcgatt cacagcttta tccgcaaatt
     5401 tccggacata agagccgttt tgccattcgt tttatgccgc tggacagtga aaacggacag
     5461 gtaccggaac gtctagattt cgaactggcc tgttgctaag gagtgaaaat gtcagaaact
     5521 attacggtga attgcccaac ctgcgggaaa acggtggtat ggggtgaaat cagcccgttt
     5581 cggccatttt gctccaaacg ttgtcagctg atcgacctcg gagaatgggc tgctgaagaa
     5641 aaacgaatcc ccagcagtgg cgatctttcc gaaagcgatg actggagcga agagccaaag
     5701 cagtgacatt ggtctgatgc cgcacatagg cctgataaga cgcggacagc gtcgcatcag
     5761 gcatcttgtg caaatgtcgg atgcggcgtg aacgccttat ccgacctaca gactacagac
     5821 gcttaagctt cgcaattacc ggttcattgg ctggcggaaa atcatcggca ttaagaccga
     5881 ccagcgacat ccactcaccg ggttgccctt ctttacccca cggcacccct tcccaacttt
     5941 cgaccagcca gaaccacaga gttatatgcc tgtccgggaa ttcatatgcc agtttttcaa
     6001 atagcgaaaa atgttgtggg gtaatcccga cctcttcctg aagttcacgc accaccgcct
     6061 gttccggcgt ttcgcccatt tcaattttac cgccgggaaa ctccagttta ttcgccatgt
     6121 gcgcatctgc tgcgcgacgc gttataaaga tttcattgtt ctcgttgcga ataataccta
     6181 ccgcaatttg cagctttttc attgttttaa acctataaaa aaggcgcaga atcctgcgcc
     6241 ttttgcttca acagttagct tttattgcag gcggccatga cactgcttgt attttttacc
     6301 agaaccgcac gggcaaggat cgttacgtcc tactttgcgc tcaccggttt gcgccgccag
     6361 tgcagctgcg gctgcagagt cgtcatcctg atggctaagc tgctgcattt gcgctaaacg
     6421 ctcggcttcc atacgacgct gttgttccag ctcctcaacc tcttcaggca tacgtacctg
     6481 aactttgctc agcgtactga taacttcata tttcaacgac tccagcatcg ctgcaaacat
     6541 ggagaacgat tcacgtttgt attcctgctt cggatctttc tgtgcatagc cacgcaggtg
     6601 gataccctga cgcagatagt ccatcgctgc caggtgctct ttccacaggg agtcaagcgt
     6661 ttgcagcatg acgcctttct cgaagtgacg catcatctca gcaccaacca cttcttcttt
     6721 acgctgatac acttcgatgg actgcgccag aatgcgctca cgcagcgtct cttcatgcag
     6781 ttctggttct ttatccagcc actcggcaat tggtaaatcg aggtcgaaat cgttcttcag
     6841 acgttcctgc agccccggaa tatcccacat ttcttccagc gactgtggcg gaatgtaggc
     6901 atcaatggtg gctttgaaca catcttcacg aatgctgttg atggtttcgc tcacatcgct
     6961 gacatccagc agttcgttac gctgggagta aatggcgcga cgctgatcgt tagccacgtc
     7021 atcatattcc agcagttgct tacgaatgtc gaagttacga ctttcaactt tacgctgggc
     7081 gttggcaatc gctttagtca cccacgggtg ttcaatggct tcgcctggct tcatacccag
     7141 tttacgcatc atgccggata ctcggtcgga agcaaaaata cgcatcagcg catcttccat
     7201 cgacaggtag aaacgggaag aaccagcatc cccctgacga ccagaacgac cgcgcaactg
     7261 gttatcgata cgacgggatt cgtgacgctc ggtaccgatg atatgcaggc cacctgcttc
     7321 cagtaccgca tcgtgacgta cctgccagtc ggctttaatt ttttcaattt gctctgcggt
     7381 cggattttcc agcgcggcaa cttctgcctg ccagctacca ccgagcacaa tatctgtacc
     7441 acgacccgcc atattggtcg cgatagtcac cgcagccgga taacctgctt gagcaacaat
     7501 cgccgcttcg ttggcgtgga atttggcgtt caggacgttg tgcttaatac cggctttggt
     7561 cagttcgttt gacaccagct ccgatttttc gatggagata gtacccacca gcaccggctg
     7621 gcctttcgca gtacgttctt tgatatcttc aatgatcgcc tgaatttttt ccgcttcagt
     7681 catgtagacc aggtccggca gatctttacg aatcattgga cggttggtcg gaacaacgac
     7741 ggtatccagc ttgtagatgg agctaaattc gaaagcttcg gtatcagcag taccggtcat
     7801 ccccgccagt ttttcataca gacggaagta gttctggaag gtgatcgaag ccagcgtttg
     7861 gttttcgttc tggatctgca caccttcttt cgcttccaca gcctggtgca gaccatcgga
     7921 ccagcgacgg ccctgcatgg tacgaccggt gtgttcgtca acgatgataa cttcaccatc
     7981 tttaacgatg tagtcgacgt cgcgggtaaa cagcgcatga gcgcgcagcg ccgccgttac
     8041 gtggtgcatc agcatgatgt tggccggaga gtacagagac tccccttcat ccatgatgcc
     8101 ctctttcacc agcagttctt caatcagcac cagaccacgt tcggtcaggt tcacctggcg
     8161 agatttttcg tccaccgaga agtggccttc gccctggaag gtttcggagt cttctttttc
     8221 ctgacggatc aggtgcggaa taattttatt cacgcgttta tacatttccg agctgtcttc
     8281 tgccgggccg gaaatgatca gcggtgtacg cgcttcatcg atcaggatgg agtccacttc
     8341 gtccaccagc gcatagtgca gtttacgctg tacacgttct tcagggctga acgccatatt
     8401 gtcgcgcagg tagtcaaagc cgtattcgtt gttcgtaccg taagtgatgt cagctgcgta
     8461 agcttcgcgc tttgccggtg ctggcatgcc cggcaggttg ataccgacag tcaggccaag
     8521 gaattcaaac agcggacggt tgttttcggc gtcacgttgc gccaggtagt cgttgacggt
     8581 aactacgtgc acgcctttac cggttagtgc gttcaggtaa gcaggcagcg ttgcggtcag
     8641 ggttttacct tcaccggtac gcatttcggc gatgcagcgt tcgttaagaa ccataccgcc
     8701 gagtaactga acgtcgaagt gacgcatacc aaagacgcgc ttacttgcct cacgtaccac
     8761 ggcgaaagct tccgggatca gattttccag cacttcgcct ttttccagac gtgcacgaaa
     8821 ctctgcggtt ttccctttca gttcttcgtc ggagagtttt tccatctccg gttccatggc
     8881 attgatgatg ttgaccactt tgcgcatccg gcgcagggtg cgatcgttac gactaccgaa
     8941 aactttagtt aacaatttga ttagcataat aaaatctcaa acgccccgcg ttgcggagtt
     9001 aataaaatga agtaaaggtt tattgttgtt aggtgaggcg ttgagggcca gcacggatgc
     9061 cttgcgcctg gcttatccag acgggcgtgc tgaattttgc ttgtggggta aaatgcgcat
     9121 aatcaatgcg ataacccttt tcagacggcg tgccttcctg ggtcagcagc gcgctgagcg
     9181 tatccagtaa tgcaagatgt tgcgcctgaa gaggcaaaga ttcttcagca acgggcagtg
     9241 tttgcggtgc cattgcgaaa gaaagatgac ggattaccgt gcgaatggca tattgatgcc
     9301 agtaatcaac ggaatagttc gaattcgggc ggcgtgtgtt cgcttccagc aaggccaatt
     9361 gaccaaagtt aactttggct gaaggctcgt ggttgcgggt tgtcgctttt gcgggcacgt
     9421 ttggttcggc ggcgttgctg agcgcaggca aacctaaact cgccgcgacc atccctaata
     9481 agagatgcgg ccagaagtag cgtttaccaa actgtcgcca gcgcgtcagt attccactca
     9541 cgttattgcc atcccgatcg aattcaaacg tatttagcgc acaaatctta tcattaaagc
     9601 ctgaagtcca cagcatgaat gaagataagt tgtgcgtaaa agtgcttaaa aaaacagcgt
     9661 tcgcaccgtt ttttatagct cttataaaat tcaaaaaaaa acgactggtt cacctggccg
     9721 gagagagtgc cagatttgcc agtcgaattt tatacgacag tataaatgtc gttatgccag
     9781 tacagctgaa ggcgctttga aggccaacgg cagttctgcg tcgtcctgga aggtcacata
     9841 ttcccaagct tcctgtttcg ccaggacagc ctgcagcagt ttgttattca gtgcatgacc
     9901 ggatttataa gcgataaatg caccaataat attgtgacca cacatgaaca agtcaccgat
     9961 cgcatcgagc attttgtgac gcacaaattc gtcttcaaaa cgcaggccgt cttcgttcag
    10021 tacgcgataa tcgtcaacaa cgatggcaca atcgaagctg ccgcccaggc acaaaccacg
    10081 ggactgcaga tattcgatat cacgcatgaa accgaacgta cgcgcacggc tgatctggcg
    10141 cataaacgca tcagcggaga agttcatcgc atagcgctgg ttgctggaat caatagccgg
    10201 atggttaaaa tcgatggtga aatccagcga aaaaccattg tacggcttaa attcagccca
    10261 cttatcgcca tcttcgacac gaacagtctc tttgatgcga acaaattttt tggcgcagtt
    10321 caactcgtcg ataccggcgt caagcagcag gtatacaaac ggagcggcgc tgccgtccat
    10381 gatcgggatt tccggcgcgt taacttcgat aacaatgtta tcgatgccca ggcccgcgag
    10441 agcagcattg aggtgctcta cggttgaaat ccgtacatca tgctcgttga ccagacacgt
    10501 acagagcatg gtatcacgca cagatttggc atcggccggg aaatctaccg gtggattcaa
    10561 gtcggtgcga cgatagatga ccccggtgtt ggccggcgca gggcgtaacg tcagagtgac
    10621 tttcttgccg gtatgtaaac cgacacccgt cgcctgaacg atacgtttaa gtgtcctttg
    10681 tttgatcatc gtattatctc gccaaattac ctatccaacc gaagtgtact atacattcgg
    10741 cgggccagtt tagcacaaag agcctcgaaa ccaaaattcc agtcaattct taatcagctt
    10801 gcttacgcag gaatgctggg atatccagat aatccggctc tttcgcagtt tgcggcgcat
    10861 tgtcattcac gactttagca accggcttct gctcctgggt cagcggagcc atcccatgct
    10921 gctggtagcg atccatcact ggctgctgaa cctgcttatt ggtcaccaga gtgatttcag
    10981 gacgtttgtc catgccgata cctgtcgcaa caacggttac gcgcagctcg tcattcatat
    11041 ccgggtcaag agaagtaccg ataaccacag tcgcgttgtc ggaagcaaat gcacggatgg
    11101 tgttacctac cgtttcgaac tcatccagac gcaggtcgaa gcccgccgtg atgttaacca
    11161 gcacgccgcg cgcgccagac aggtcgatat cttccagcag cggagaagag atagccattt
    11221 cagcagcttc ttccgcacgg tcttcaccgc tcgccacgcc agaacccatc attgcgtagc
    11281 ccatctcaga cattacggtg cgtacgtctg caaagtccac gttcatcaaa cccggacgag
    11341 taatcagttc agcgatacct tgcacagcgc ctttcagtac atcgttcgct gcgccaaacg
    11401 catccagcag ggagataccg cggcccagaa ctttcagcag tttgtcgttc gggatagtga
    11461 tcagagagtc cacatgcttg gacagttcag tgatcccctg ctccgcgaat gccatacgct
    11521 tcttgccttc aaagttgaaa ggcttagtga cgacagcaac ggtcaggata cccaaatctt
    11581 ttgccacttc agcgacgact ggtgctgcac ctgtaccggt accaccaccc atacccgcag
    11641 caataaagac catgtctgca ccttccagcg ccgcacgcaa tgcatcgcga tcctcatcag
    11701 ccgcattgcg gccaacttct ggattagcgc cagcgcccag tcctttggtg ataccgctac
    11761 cgatttgaat cgtctgtcca accgctgttt tacgcagcgc ttgtgcatcg gtatttaccg
    11821 cgaagaattc aacaccttca atgcgctcgc gcaccatgtg ttcaacagca ttaccgccgc
    11881 cgccgccgac gccgatgact ttaatcaccg cgtcattggt aagttccatt ggttcaaaca
    11941 tagtttctct ccgatttgtg cctgtcgcct gaggccgtaa tcatcgtcgg cctcataaaa
    12001 attaaaactc ttttcgcagc caactattga gtcgcttgat ccacgagcca actgatgctg
    12061 taacacgttt ttctacttca gcttcaccgt taagatgtga ctctttccca tagtgaagca
    12121 atcccaccgc cgtcgaataa tacggctcct gagcataatc cgttaaaccg gtaatgttca
    12181 gcggcgcgcc gatacgcact tgcgtatgaa acacgcgctg agcacaggct gcaagacctt
    12241 cgatctgcgc tgcgccaccg gttaatacaa tgcctgccgc caggtgatgt ttaacccctt
    12301 gttggcgaag cttttcctgc aactgcaata tctcttcgtt gaccaggttg agcagctcgg
    12361 tatagcgcgg ctcgatcacc tctgccaggg tctgacgttg cagactccgt ggcggacgac
    12421 cgcctacgct cggcacttcc acgctctcat cttttccaac gatggaaccc agcgcacaac
    12481 cgtggcgaac tttaatcgct tcggcgtcgc ttggcggcgt gccaaaggcg taagcgatat
    12541 cactggtcac gacattgcca gcataaggaa ttaccttagt gtggcgcaat gccccaccgg
    12601 tataaacggc gatatccatt gtaccacctc cgatatcgac gacgcagaca cccagttcac
    12661 gttcatcttc cgtcaatacc gaataacttg atgccagtcc ggcaaatatc agttggtcaa
    12721 ctttcagccc acaacgttca accgctttga cgatgttttt cgccatatcg ttgtgacatg
    12781 tgatcaggtg cacttttgcc tgcatccgca cgcccgaaag tcctaccgga ttcttgatcc
    12841 cttcctgata gtcaatcgca tactcttgcg ggatcacatg cagcacacga tgttcatcgc
    12901 gcacacgcac cgatttcgcg gtatggacga cgttttccac atcttcttgc gtcacttctt
    12961 cttcagaaat aggcaccata ccaatttcat tctggcagct gatgtgctta ccagaaagcg
    13021 ccagatatac cgaagagatc tgacaatctg ccatcaattc tgcctggtca atggcgcgtt
    13081 gtacgcactt gaccacggat tcgaggtcgt tcaccccgcc tttatccata ccacgtgacg
    13141 ggcagctgcc cacgccaatg atattgacca taccgtcggg cagaacttcc cctactaaag
    13201 cggcaacctt cgcggtacca atctccagtc ctactaccag ttttctgtcc gtcgccttga
    13261 tcattgttgt tctgcctgtg cctgattttg ttgctgagta gattcctctg gcggcaaggg
    13321 cgcccagcct actgccgctc cagagtcata acgcaaatca acgtagctaa tccgtttgcc
    13381 atcggtttgc gccagctgct gtaaaaccgg ataaagttct acaaagcgag ccaaacgttt
    13441 catcgtatcg ccccggccaa gattgagctt aatatcgtta ttcagcgtca actgccagga
    13501 acgccgcgcg gtcatcgccg tttccttcag agtaaatctg tcctttgcca gcatctgccc
    13561 catttcgcga tagccctgca acacttcatt ggcgctgcct tccgggccat acagcattgg
    13621 aagcacctgc ttgctggtgc gatctggcgg cacgctgaag gtgtttcctt ccgcgtctac
    13681 catatgttga tcattccacc gcgcaatcgg cacatattca accagatgaa tcttcaattc
    13741 atcaggccac tgctttctga cgctcacctg cttaatccac ggcaggcgtt gttctatttg
    13801 cgtctggatg atgttgacat cctgggtcat aaaggtaccc ggctcaccca atgccaggat
    13861 cgactgccgg atatcgtcat tacgcgtgta atggcgttca ccggtcaaca ccagctttga
    13921 gagcggcagg cgttgcgcat cttccatcca gcccaacacg acccagccgc tcaccaacac
    13981 tgtcgttaaa acggtcagca ggaaaaggat ccccgccaga cgcgttccat tattgcggcg
    14041 agaagaaacc tcttcttcgc tgtttcgcgt gttcagagca gcctgcgaca tattagtccg
    14101 ccagttccag aattcgtact accaactgcg agaagctcat acctgcctga cgtgccgcca
    14161 tcggcaccag gctgtggctg gtcatacccg gtgaggtatt ggcttccagc agataaaact
    14221 gtccatcgct gtccagcata acgtcaatac gtccccatcc tttgcaacct aacgtcgtcc
    14281 atgctttcag cactaatgcc tgcaaattgg cctcttgtga cgcatccaga cctgcggggc
    14341 agaaatactg tgtctcatca gagagatact tcgcctcata atcatagaag gttccggacg
    14401 gttgaatacg tattgacggt aaaatttctt caccgagtat cgcaaccgtg aactccggcc
    14461 cacttagcca tttttcaatc aatacttctt catcgtgctg aaatgccaat cttaatgcat
    14521 cttgtagagc attttctgct actacttttg acattcccac actggaacct tcgcggctcg
    14581 gcttaacgat aaccggcaaa cccagagcag aaatttctgc taactgctta tcgctcaggc
    14641 ctttttcaaa ctctgcgcgg gttaacgcta cccacggcgc gaccggtaaa ccggcacctt
    14701 gccacagcag tttgctgcgt agtttatcca ttgaaagcgc agatgccatc actccgctgc
    14761 cggtataagg caagcccatc agctcgagca tgccctgcag cgtaccatct tcaccgccgc
    14821 gaccgtgtag cgcgataaac actttctgaa aacccatcga cttcagttgc gtcacgtcga
    14881 cttctttcgg gtcgacagga tacgcatcaa taccaccttc acgcagcccg gctaacaccg
    14941 ctgcgccaga attcagagaa acttcccgct cagcggaagt cccgcccaac aggaccgcga
    15001 ttttatcagt catgttgttc ttcctccgga gtttgcggct tcagtttgat ttcagctaaa
    15061 gaacgggcaa tttttccgat attaccagcc ccctgaacga gaatcaggtc gttaccggtt
    15121 aataccggtg ccagcatctc ggctacctgc gcagggtccg gcaccagaat gggatcaatt
    15181 ttcccacgtc cacgaattgt gcgacacagc gaacggctgt ccgctcccgg aattggcgct
    15241 tcgccagccg gatacacttc cagcatcaac agggtatcaa cctgcgtcag cacattggcg
    15301 aaatcatcat acaagtcgcg cgtacgggta aaacggtgcg gctgaaacag cattaccagg
    15361 tttttatccg gccagcctgc gcgcgccgct ttaatggtgg cgtcaacttc cgtcgggtgg
    15421 tggccgtagt catcgaccag cattgccgta ccgcttttac cattcactgg ctccagcggg
    15481 aattcaccga ggaaatcaaa acggcgacca gtccccagga agctctccag cgcacgcaaa
    15541 atagcctcgt cgtcaattcc ctcttccgta gcaaccgcaa ccgcagctgc ggcgttcagc
    15601 gcgttatgac ggcctggcgc attcagggtg acgcgcatcg gctctttgtc ctggcgcagc
    15661 agcgtaaagt gcccctgcgg gccaatctgc tgataatctt ctacacgcac gtcggcatct
    15721 tcgctgaagc cgtaagtcgt ggtctgacgt cccacacgcg gtaacaattc gcggatcacc
    15781 ggatcatcaa cacacatcac cgcacgaccg taaaacggca ggttgtgcag aaaattaata
    15841 aaagtctgtt ttaaattctc aaagtcgccc tggtaggtat ccatgtggtc ggcttcgata
    15901 ttggtgacaa tcgccaccat cggttgcaga tgcaggaacg atgcatcact ctcatctgct
    15961 tcggcaatca ggtaccgacc atgccccaaa cgcgcatgaa cccccgccgc ttttaccagc
    16021 ccgccgttaa cgaaggttgg gtcgagcccc gcttctgcgt agatgctgga aaccatcgcg
    16081 gtggttgtcg ttttgccgtg cgttcctgca atggcgatgc catgacgaaa acgcattaac
    16141 tcagccagca tttcggcacg acggatcacc ggaatacgcg cttcatgagc tgcgacaatt
    16201 tccgggttat cggcagaaat ggcgctggaa acaacgacca cgctggcatc acgtacgttt
    16261 tccgggcgat ggttgaaata aatcgtcgct cccagattca ttaactgctg cgtgaccgga
    16321 tttggcgcta aatcggaacc actgatctga taaccttcat tggccagaac ttcggcaata
    16381 ccgcccatac cggcaccacc gatgccgaca aaatgtatgt gccgaacgcg acgcatttcg
    16441 ggcacgatgg aacgcagttt tgccaattgt tgtgtattca ttctttacgc cattaacttc
    16501 ttaaattcat acgatgcaaa aggcatcgct acaattacgc ccgggcagcc cggctcactt
    16561 catttgccac tcgctcggtg gcatccggaa tggatgcagc gcgggcgcgt tctgccatgg
    16621 ttaataaggt ttctcgcgac cacccggcca gggtgttggc gacagcatcc acgctaagct
    16681 gtggctgctc gataattttg gctgcgcccg ctttttccag cggtagcgca ttccagtatt
    16741 gctggcggtc tttatgttga aacggcacaa acaacgccgg tagtcctgcc gcggcgattt
    16801 cactcaccgt taaagcaccg gagcggcaaa cgacgacatc cgcccacgca tacgccgccg
    16861 ccatatcatc aataaattcc gtcactttat gctgcggttg ccccgcttcg gcatacgcct
    16921 gttcaacgga ttgttgcgaa cctttaccgc tctgatgcca gatagtgact gaatcaccca
    16981 gtttcgcagc aacctgcggc attgtctggt taagaatgcg tgcgccctgg gaaccaccca
    17041 ctaccagcac acgaaccgga ccttcacgtc cagccaaacg ttgctgcggc aacggcagcg
    17101 ccagcacatc ggtacgcacc gggttaccca ccacttccgc attagggaaa gcgcctggaa
    17161 acgcctgcat cactttggtg gcaatcttcg ccagccattt attggttaag cccgcaatac
    17221 cgttttgttc atgaagtaca accggaatgc ctaacgacca cgcggccaga ccacctggac
    17281 ctgatacata gccgcccata ccgagtacca cgtcaggttt gtacgctttc ataatcgccc
    17341 gcgcctgacg ccaggcgttg aagatacgca gcggcgcagc tatcagtgct tttatacctt
    17401 ttccacgcag accagagata cgaatgaaat caatttcgat gccatgtttt ggcactaagt
    17461 ccgcttccat acggtcggca gtccccagcc agcgaacttg ccaaccctga gccattagat
    17521 ggtgcgcaac cgccagtccc gggaatacat gtccaccggt tccgcctgcc atcaccatta
    17581 atcgctttcc ttgaccactc atcgtgaacc tcgtacaaac gcctgcgctt tctccagacg
    17641 cgtttcataa tcaatacgca acagcatcat gatggctgtc gacataatca gtaagctcga
    17701 accaccgtaa ctgatcagcg gcaatgtcag acctttggtc ggtaacatcc ccgccgccgc
    17761 gcctacgtta accagcgcct ggaagctaaa ccagatgcca atagaacagg cgagaaaacc
    17821 ggaaaaacgg tggtcaattt ctaacgcttt gcggccaatc gacatcgcgc gaaaagcgac
    17881 gaagaatacc attaaaagtg ccagcaccac accgacatac cccagttctt cgccgataat
    17941 ggcgaaaata aagtcagtgt gcgcttccgg cagatactcc agtttttgta ccgagttacc
    18001 taaaccttgt ccccaaagtt cgccgcgacc aaacgccatc agcgattgcg ttaactgata
    18061 gccgctgcca aagggatctt cccacgggtt ccagaatgcg gtaacacggc ggatacggta
    18121 cggttcggcg agtatcagca acacaaccgc tgaaatgccc ataccgataa tggcaatgaa
    18181 ctgccacaat ttcgctcccg ccaggaacaa catcgccagc gtagtcacaa acaccaccac
    18241 caccgtacca aggtctggct gtgccagcag taacactgcc aacaccagaa tcacgcccat
    18301 cggtttcagg aagccgcgca ggttattacg tacttcgtcg cctttacgca ccagatagtt
    18361 ggcgatataa caaaacagcg acagttttgt cagctccgca ggctggatac gcagcaaacc
    18421 gagatcgatc caacgcgatg cccctttaac cgagctcccc actaccagca cgatcatcag
    18481 caggatgata gatccgagca gcatcgtggc actgtagcgt tgccagaact ccatcggcag
    18541 acgcagcgta atgatcgcca gaatgaatgc caggatcaga tagacgccat cacgcttcgc
    18601 gaagaagaac ggatcgttgg ttaagcgttg ccctatgggc attgacgccg aggtcaccat
    18661 gataaagcca atcgccgcaa ggccgaaggt cagccacagt aaggtgcgat cgtacatgat
    18721 caggctgtcg gtatcttttt cccgcgagcc catcacccag ccttttagcg ccgtggagat
    18781 ccagaccagg atactgaatc ctggcaggcg cggcattttc aggcgaggga gagataaacg
    18841 catcaaccta actccttcgc cagacgggca aactcattgc ctcgttgttc aaagttcttg
    18901 aactgatcaa ggctggcaca ggccggggag agcagaacca tatcgcccgg ctgaacacgc
    18961 ggagccagca agcgcatcgc ctgttccata gtttcggttt gttctgccac ttccgggcgt
    19021 agcgccgcca gctgcgcacc gtcacgacca aaacagtaca aacgcacgtt gtcgccattc
    19081 agatagcgcg ccagtggact gaagtccgcc gatttaccat cgccgcccag caacaaatgc
    19141 agcgtgccgt ctacctgcaa gccattcaac gccgcttccg tactgccgac gttagtggct
    19201 ttcgaatcgt taatccagcg tacgccattg tgctccagca ccacttcaaa gcgatgcggc
    19261 agaccggtga aggtggttaa cgctttcagg ctgctggcgc gcggcaaacc agctgcgtct
    19321 gccagtgcca gtgctgccag cgcattggtg tagttatgct gcccggaaag tttcatctct
    19381 ttcacgttca gcactttctc gcctttcact cgcagccagg tttctccctg ctgatgattc
    19441 aggtgatagt cacccatgtt gacgccaaag ctgacgcagc gttcatcagc accgcgaatc
    19501 ggcattgtta aggcatcatc agcattgacg acacaaactt tcgcattttc gtaaatacgc
    19561 aattttgccg cacggtattg ctgcaaacca aacggatagc ggtccatatg atcttcagtc
    19621 acgttcagaa tggtcgccgc caccgcctgt aagctggaag tggtttccag ctggaagctc
    19681 gacagttcca gcacgtacag ttcgcactca gcatcaagca gcatcaacgc tggcaggcca
    19741 atattgccac ccacaccaac gttaaccccc gccgctttcg ccatttcacc cactagcgtg
    19801 gtgaccgtgc ttttgccgtt agaaccggta atcgccacaa tcggtgcttg tgcttcgcgg
    19861 cagaacagct cgatatcgcc aacgatttcg attccggcat cagcggcagc gcttaaggat
    19921 ggatgcgcca gtgcaatacc gggactggcg acaatcagat ctgccgccat cagccattca
    19981 tcattcagac tgcccgtgtg gcgttctacg gcttcgggta atttatccag gccaggcggt
    20041 gtcatacgcg tatccataac gcgcggcgtc acaccgcgag cgaggaaaaa gtccacgcag
    20101 gaaagcccgg tgaggcccag gccgataatg acgacatttt taccctgata atcagccatg
    20161 attaacgtac cttcagcgtt gccagaccaa tcagaaccag catcagcgaa ataatccaga
    20221 aacgcacaat gacgcgcggt tccggccagc ctttcagttc atagtggtga tgaatcggtg
    20281 ccatgcggaa aatacgttgt ccgcgcagtt taaaggagcc gacctgcagg atgacagaaa
    20341 gcgtttctac cacgaacacg ccccccataa tcaccagcag gaattcctga cgtagcagta
    20401 cggcgataat gcctaacgca ccacctaacg ccagcgaacc tacatcgccc ataaagacct
    20461 gcgccggata ggtgttaaac cacaggaagc ccagtcctgc cccgactatc gcggtacaga
    20521 caataaccag ttccccggcg tgtcgcagat acggtatgtg taaatagctg gcaaagttca
    20581 tgttgccggt cgcccacgcc accagcgcaa aaccaccggc gacaaatacg gtcggcataa
    20641 ttgccaggcc gtcgagacca tcggtcaggt ttaccgcgtt gccagtaccc acaatgacga
    20701 agtaagccag cagaatgtag aacagcccca actgcggcat cacatcttta aagaatggga
    20761 ccaccagctg cgttgcgggc gtgtctttgc cggcaaggta cagggcgaag gcgacaccca
    20821 gcgcaatgac cgacatccag aaatacttcc aacgagcgat caaccctttg gtgtctttac
    20881 gcaccacttt gcgataatca tcaacaaagc caataacacc gtaacctacc agcaccacca
    20941 acacgcacca gacgtacgga ttggacgggt aagcccacag cagtacggag atcacaatcg
    21001 ccgtcaggat cataatcccg cccatggtcg gcgtaccgcg cttgctgaag tgtgattcag
    21061 gaccgtcgtt acgcaccacc tgaccaaagg aaagtttttg caaatgagca atcatacgcg
    21121 ggcccatcca caatgagatg aacagcgcgg tcagcaggct gacgatggcg cgaaacgtca
    21181 gataggaaaa gacgttaaag ccggaataat atttgaccaa atgttcggcc agccaaacta
    21241 acatgtccca ttctcctgta aagcgcgtac tacctcttcc atggcggcac tacgtgaacc
    21301 cttaactaaa atcgtaatta cctgttgctc agcaatcagt gatttaagac gcgtaattaa
    21361 cgcagtttta tcagcaaaat gttcgccaac gccgctggcg gtgctgatag catggctttg
    21421 tttacccacg cttaacacgc ggtcaatacc agcagctttt gccgcctcgc ccacctgtac
    21481 atggcaggct tcgctttcag cgcccagttc cgccatatcg cccaccacca gcacgcggta
    21541 gcccggcatt tcagccagta cctgaacagc ggcggtcatt gaaccgacat tggcgttgta
    21601 ggagtcgtcg agcagcaact ggttttctgc cagttggatg gggaacagac ggcctggaac
    21661 agctttcaga tttgccagcc ccgctttgat agcatcaagc gttgcgccca cggacatgga
    21721 gagcgcagcg gctgccagcg cattcgcaat attgtgacgc cccggcaacg gcagcagaac
    21781 atcgacgcta ccggttgggg tttgtagggt aaattccgta ccgtgcgagg tcacatggat
    21841 attggtggcg gtgaaatcgc tgttggcggc attgggtgag aaacgccaca ctttgcgtga
    21901 gccaattacg ctctgccagt tcagccagtc gttgttgtcg gcgttcataa tggcgatacc
    21961 gttttccggc aggccgctaa agatttcacc tttcgctttc gcgacacccg caagcgagcc
    22021 aaaaccttcc agatgcgccg ctgccaggtt gttgaccagc gcagcttccg ggcgagtcag
    22081 actcacagtc caggctattt cgccctgatg gttcgcgcca agttcaataa ctgcgtaatc
    22141 gtattccggc gttaagcgca acaacgtcat cggtacaccg atgtcgttgt tgagattgcc
    22201 tgccgtataa agcgtgttgc cgcactggct taaaatcgcc gccgtcatct ctttaacgga
    22261 ggttttgccg gaggaacctg tcagagcaac cacgcgcgcc ggaacttgct ggcgaaccca
    22321 tgcagccagt tcaccaaacg ccagacgcgt atccttgacg attaactgcg gcaggtcgat
    22381 atccagcgga cggctgacca gtagtgcgcc cgcgccgcca gctttcgcct ggtcggcaaa
    22441 atcgtgggca tcaaaacgtt cgcctttcag ggcaacaaac aggcagcccg gcgtcagttt
    22501 tcgggtatca gtggttacag catcaagggt gatatctgca ccttgcagtt caccgttgag
    22561 aatgtcggta agttggctaa gggttacgct aatcatgcaa tcacccccag cagacgcgcc
    22621 accgtgacgc gatcggagta gtccagacgc tgattgccaa caatctggta atcttcatgg
    22681 cctttgcccg cgaccagcac cacatcgttc tctttagcct gcataacggc gcaagtcacc
    22741 gcttcagcac ggccttccat cactttggca tgtccggcat ctaacattcc cgccagaata
    22801 tcgttgatga tggcacgcgg ttcttcggta cgcgggttat cgtccgtcac caccgccacg
    22861 tcagcaaact cttcggcaat tgcgcccatc agtggacgct tacctttatc gcgatcgcca
    22921 ccacagccaa agacacacca cagcttgccc gcacagtgca gacgcgccgc ctgtaaggct
    22981 ttttccagtg catccggcgt atgcgcgtaa tccaccacca ccgtcggttt gcctggcaca
    23041 gtgaacactt ccatacgtcc gcaaaccggt tgcagacgcg cggcggtttt caacagatca
    23101 gccaatggat agccgagtgc caacagtgtc gccagcgcga gcagcaggtt gctgacgtta
    23161 aaagcgccta tcagatggct ttcaatttcg ccatcgcccc aacttgagct aaagcgaatc
    23221 gtcacaccgc tgtcgtgata gttcacgtcg atcactttta accagcgtcc gtgacagttc
    23281 ggattaatat gatcttccat tgataccgca accgcgtccg gcagctttgc cagccaacgg
    23341 cggcccactt catcgtcggc gttaataatc gcctgaccgc aatgatgttc agaataaagc
    23401 agccatttcg cagcttcgta gtgttccata tcaccatgat aatcaaggtg atcgcggctt
    23461 aagttggtaa agaccgacgc cgcaaatttc aatgccgcca cacggtgctg taccagcccg
    23521 tgggaggaaa cttccattgc gcaaaacgtc gcgccctgct ccaccagccc cgccagctca
    23581 tgctgaacat cgactgccga accggtggta ttttctgtcg ggatcacttt ccccagcaga
    23641 ccgttaccaa cggtgcccat taccgcgctg gtttcgccaa gcagttggct ccactgcgcc
    23701 agcagctggg tagtcgtggt tttgccgttg gtgcccgtta cgcctacgag acgtaaattg
    23761 tcagagggtt catggtaaaa gcggcccgcc agtgcagata aacgctcgtt gagctggctg
    23821 agatagatga ccggtacgcc gtgcatttca cggatttcac cgtcggtcgc ctcatctttc
    23881 gcctctgcaa taatggcagc cacaccttgc gctatcgcct gcgggatata tcgacgcccg
    23941 tccgcctgat gacctactac agctacaaag agatcgcccg ccgcagccac acggctgtcg
    24001 agtgtcatct ctcgcagtgc tcgcgaaggt gcgtctggca cccacggagc aagaaggtcg
    24061 cgcaaattac gatctgccac ctgtcccctc gccttgatta atcacaaatt catttttatc
    24121 gcccgttgtc agcgcatccg gctcgatgtt catggtacgc aatacgccgc ccatgatggc
    24181 accaaagacc ggcgcggaaa cggcgccgcc gtagtattta cccgcctgcg gatcgttgat
    24241 aacaacaacc agcgcgaagc gcggctgact cgcaggcgca acgcctgcgg tataagcaat
    24301 atatttattg atgtagcgac cgtccggccc gacctttttc gcggtaccgg ttttaatggc
    24361 gatacgatag cctttaatcg ccgccttcac gccgccgccg cccggtagcg ccacgctttc
    24421 catcatatgc accacggtgc ggacaatgga ttccgggaag acacgttcac cgggaaccgg
    24481 ggggtcaact ttggtaatcg acagtgggcg ataaatgccg tagctgccga tagttgcgta
    24541 gactcgcgct aactgtaacg gtgttaccat tagcccgtag ccgaaagaga aggtggccct
    24601 ctctatgtca gaccaccgtt gtttttgagg atataagcca ctgcgttctc cgaccaaccc
    24661 caaattggtc gcttttccca gtccaaaacg tgagtaagta tctactaacg ctgaggacgg
    24721 catcgctaac gccagcttgg aaacaccgac gttactcgac ttctgtaata ccccggtcag
    24781 ggttaattcg ctgtagcgtg ccacgtcttt gatttcgtgg ccgttaattc gataaggaat
    24841 ggtattgagt accgagtttt cccgcaccac gccacgttgc aacgcggtca tcaccaccat
    24901 cggtttaacc gttgagcccg gttcaaacac gtcggtgatg gtacggttac gcatcgcctc
    24961 tttcggcgtg ccgctcagat tgttagggtt gtatgacggg ctgttagcca tcgccagcac
    25021 ttcacctgtg ttgacatcca ccagcacggc gctaccagat tcagccttgt taaaggccac
    25081 cgcgttgttc agttcgcgat aaaccagcgc ctgcaggcgt tcatcaatac tcagcgccag
    25141 gttgtgcgct gcctggctgt cagtagaaga aatatcttca attacgcgac catagcggtc
    25201 tttacgcaca atgcgctcac ccggctgccc ggtaagccat ttatcgaaac tcttctcaac
    25261 gccctcaatc ccttgactat cgacgttagt aaagccaatg aggtgagcag tcacttcgcc
    25321 ggatggataa taacggcgag attcttcacg cagatgaata cccggcagtt tcagtttttt
    25381 gatgtagtcc gccatgtcag ggtttacctg acgcgccaga taaataaagc gccctttcgg
    25441 gttggcgtta atgcgggcag aaagctgatc cagcggaata ttgagcgcgt tagccagcgc
    25501 cttccagcgg tcaccgacgc tgataccgcc agcgtcatgc acttctttcg ggtcagccca
    25561 aatcgctttt accggcacgc tcaccgctaa cgggcgacca gaacggtcag taatcatgcc
    25621 gcgggaggtg gaaacttgct gaacgcgaag agaacgcatg tcgccctctt tcaccagcat
    25681 atccggggag ataacttgta accacgctac gcgtccgagc agaaaagcca gcgccaggag
    25741 aatacagccg cataacaacg caaaacgcca actaataaag ttggcatgtt cttcctgacg
    25801 ttttggtttc tgcgttttcg ccgctgcttt catgcgtcgc gtttatcctt atttttgcac
    25861 tacgatattt tcttgtgacg gatcaacatg ctgcatttgc agcttttccg tggcgatcct
    25921 ttccacccgg ctatggtcgc cgagcgcatt ctcttcaagg atcaggttgc gccattcaat
    25981 gtctaaagca tctcgctcca gcaccagttg ttcgcgctga gcggtcagta aacgggtatg
    26041 gtgcgccgtg gttaccacgg tcaccgccgt caaaataatg caaatgaaca ggcagagtgg
    26101 cagcttccca aatcgcaaaa gatcgtcacc gataacacca ggcaatgcat ggcgctcgtg
    26161 gcttcccatc gatcctttaa ctttgcttag agcttctgtc actctgctga tcatgcgttc
    26221 gtcctctctg cgatacgcag aactgaacta cgggcacgag gattctcagc cacctcttct
    26281 tcgcccggca ttaacttgcc taatgctcgc agctgacggc cacccagttt tttgagctgc
    26341 tcttcagtca tcggtaaccc tgccggaact tgcggaccgc ggctgttttc acgcataaaa
    26401 cgtttcacaa tacggtcttc cagcgagtgg aagctgatga tcgaaagccg cccacccggg
    26461 gccagcacgt tgagcgagct ttttagcgcc tgctctatct cctccagttc actgtttacc
    26521 caaatgcgca ccgcctggaa ggtacgggtc gcgggatgtt taaacttatc tttcaccggc
    26581 gttgcagcag ccacgacttc cgccagttct ttggtgcggg tcatcggctg ttcgcggtta
    26641 cgctcgacaa tggcgcgggc aatgcgtttg gcaaaacgct cttcaccata ggttttcaat
    26701 acccaggcga tatcggcttc ttctgcggtt tgtagccatt cagcggctga ctgcccacgg
    26761 gttgggtcca tacgcatgtc cagcggacca tcgcgcataa aggaaaagcc acgttcagca
    26821 tcatcaagtt gcggtgaaga gacgccaaga tcgaggagaa tgccgtcgat cttgccgata
    26881 agatcgcgct cggcaacgta ttcgcccagc gcggagaaag gtccgtggat gatggagaag
    26941 cgcggatcat caatagtctt cgcaacggcg atagcctgcg ggtcgcgatc gatcgccagc
    27001 aaacgcccct cttcgccaag ctgcgagagg atcagacgtg agtgaccacc gcgaccaaaa
    27061 gtcccatcaa tgtagatgcc atcaggacgg atattgaggc cattaacggc ttcatccagc
    27121 agcaccgtag tatgtttata gttttccatc attttataga gacaagtcct gcagtcgctc
    27181 cgataagtct ccagtagcca actgctctgc gtcgatatct tccttgacct gttgatgcca
    27241 ggttgtttca tcccacagct caaacttgtt gaactgtcca accagcatca cttcttttgt
    27301 cagcccggca tgttgccgca gtactggcgc gattaacaat cgacctgcgc catccatctg
    27361 acattcgctg gcatgaccta acagtaggcg ctgcacacgg cgctcaactg ggttcatgct
    27421 cgacagacgc gataattttt gctcgataat ttcccattca ggcagggggt aaagcagcag
    27481 gcacgggtga tgaatgtcaa tggtgcaaac catttgaccg gcagcgttct caagcagctg
    27541 ttcccgataa cgggtaggca ctgataagcg ccctttgctg tcgagattga ctaacgttgc
    27601 tccccggaac atgccagcct caccccttat tcccactttg ccccacaatt tcccactgaa
    27661 aggagtttac ggagcggagg aaaagcttgt caagccagtc acaaggcata ccgaggtaaa
    27721 aaacccgatg tttacggcta atatcagcgt tgtttatttt acgtccaacg cgcgaagcaa
    27781 attaacgtta tgaatagctg taagaaaaaa tccctcatcg tcatcactgt tttaaaatga
    27841 ctcactattt tccacagcaa atataaagtg tcagtttgcg acgcgagcgg cattttagga
    27901 catatcttcc ccggttaaca gtccttgtta cgtctgtgtg gcgcttgatg ccagcgggtt
    27961 tgcgcaaaag caaagaaaag tgtttgttaa atcggcaatt catcgccgca tgtaacaaaa
    28021 taatgcaaaa acgcgctgtc gatatcactt aattattgtg aatttcagct ggtgagttaa
    28081 ttaacgggcg ggtttaaaac catttatcaa taatagtcag gaatagtctt atttacttta
    28141 agcatattga tgtccagtcc cgtactctac gcgccagagg gaaattcacc tggcgcgtat
    28201 ttttgttcgc ggcttagcta cggctgagca caccgcggcg atagagatta cgtttaatgc
    28261 gcgttaaacc aggttttggc ttacgcggtt cgtccaggct tgccaggaca atctccagca
    28321 cacgctctgc gacatcgcgg tgacgttgag ccactgccag caccgggcac tgtaagaagt
    28381 cgagcagttc gttatcgcca aaggtggcaa ttgccaggtc agaaggcagt ttaccatcgc
    28441 gacgtagcgt gacatccatc accccttgca acaacgcaaa cgacgttgtg aacagcgcct
    28501 gcggcatcag atgcgtttcc agccattttt cgaataactg ggcagccgcc tcccgctcat
    28561 agctgttggc atacaggaaa tgcacttcgc gcggatcatc tttccaggca gtacggaaac
    28621 cttgttcacg caggaagctg acagaaagct ccggcagcgc gccaagataa agcaccgtct
    28681 cggcgggaaa cttacgtaac tcttccgcca gcatttcggc atcatcctga tcggcaccaa
    28741 ccacgctggt gaaatgttca cgatcgaggg cgcggtccag cgcgacaatc gggaacgggg
    28801 cgttagccca gcgttgataa aaaggatgct caggtggcaa cgacgtcgaa acaataatgg
    28861 catcaacctg acgctgtaaa aggtgctcaa tgcagcgcat ttcgttgtct ggctgatctt
    28921 ctgagcaggc aatcagcagt tgataacccc gttgccgcgc ctggcgctca agatagttag
    28981 cgatgcgggt atagctggtg ttctccagat cggggatcac aagaccaata gaacgtgtgc
    29041 gtccagcacg aagcccagct gccacggcgt tcgggtggta attgtgctca cgcaccacag
    29101 ccatgacttt ttcaacggtt ttgtcgctca cacggtattg cttcgctttg ccgttaataa
    29161 catagcttgc agtggtccgc gacactcccg ccagccgagc gatttcatcc agtttcacaa
    29221 ttgccccttg cgtaaaatgt aaaaaccata gccattgtac tggtatgggt taaattcatt
    29281 aacatctaag cgcagaaaat taactgcggc aactgctttt attccaggtt cccactgatt
    29341 tcgcaaaaaa agcccagcgt gacatgttgg gctgcaaatt gcacactgag atcattctca
    29401 acgcattatt ttatcgccgc gcgaaagtcc gaccacacca gagcgagcaa cttccacaat
    29461 tttcgccacc tcgcgaatcg atgctaaaaa tgcatcaagc ttatcgctgg tgcctgctaa
    29521 ttgaacggta taaagcgagg gggtgacatc gataatttgc ccacggaata tttccgtatt
    29581 acgtttcact tcgtcacgcc cgtaaccgct ggcctgaatt ttcaccagca tgatttcccg
    29641 ctcaacatgc gcgccctgcc ccaactcact cacgcgcaag acatcgacca gcttgtgtaa
    29701 ttgcttttcg atctgctcaa gtactttttc atcgcccacg gtctggatgg tcatacgcga
    29761 taatgtcgga tcgtcggttg gcgcaacggt caggctttca atgttgtagc ctcgctggga
    29821 aaaaaggcca atcacgcggg ataacgcgcc tgattcattt tcgagtaaga ctgataatat
    29881 ccggcgcata atcaggttct ctccgttttg cttaaccaca tttcatccat tccgcccccg
    29941 cgaatctgca tcgggtagac gtgctcactg ccatcgacgg taacatcaac aaacaccagg
    30001 cgattattgc gcacctgttc cagcgcctcg ctaagtttgc tttccagctc atgcggatga
    30061 gagatctgga tcccgacgtg accataggct tccgccagac ggacgaaatc gggtagtgat
    30121 tgcatataag attgtgaatg acggccggaa tagatcatgt cctgccactg tttcaccatc
    30181 cccagatagc ggttattgag attcaccacc agtacgggca actcgtattg caacgcggta
    30241 gacagttcct gaatgttcat ctgaatactg ccgtcgccag tgacgcaaac cacggtttct
    30301 tctggcaacg ccattttgac gcccagtgcc gcaggtaaac caaaacccat cgtgccgagg
    30361 ccaccggaat tgatccagcg acgcggtttg tcgaatggat aataaagtgc agcaaacatc
    30421 tggtgctgcc cgacatcgga cgtcacgtaa gcgtctccct tcgtcaaccg ccaaagagtc
    30481 tcgatcaccg cctgcggttt aatcttttca ctgtgagtgt catatttcag gcactgacga
    30541 gcgcgccact gttcaatttg ctgccaccag tcgcggatct catccagtgg ttgatgggcg
    30601 gattcttgcg acaagagttc aagcatttgt tcgaggacct ggcgagcatc ccccacaatc
    30661 gggatatccg cagtcacggt tttagaaatg gaaataggat caatatcgat atgcagaaca
    30721 gtggcatttg ggcagtactt tgccagattg ttcgtcgttc ggtcatcaaa tcgtaccccg
    30781 acggcgaaaa tcacatccgc gttatgcatc gtcatattgg cttcgtaggt accgtgcatt
    30841 cccagcatgc ccagtgcctg acgatgcgtt gccggaaacg cccccagccc catcaatgag
    30901 gaaacaacgg gcagattcaa cgcctccacc gtttctttca actgctgatg gcagcccgcc
    30961 atgattgccc caccgcctac gtagacaacc ggtttttttg ccactaccag cgtttgcaga
    31021 gcacgcttaa tttgcccttt atgtccggta gtagtgggat tgtaagaacg catactgacc
    31081 gactccggcc agacataggg taatttgttc gccggattaa gaatatcttt cggtaaatca
    31141 acgactactg gtccaggacg accacttgcc gccagccaga aagccttttt cagcacctgc
    31201 ggaatgtctt ccgtttgctt aaccagaaaa ctgtgtttaa ccactggtcg cgaaatcccc
    31261 accatgtcgc actcctgaaa ggcatcgtaa cctatcaacg aggtcgctac ctgcccggaa
    31321 aggacaacta atggaatgga atccatataa gcggtggcga tgccggtaat cgcattggtc
    31381 gcccctggac ccgacgttac cagcacgacg ccgacttccc cggtcgcgcg cgccagacca
    31441 tcggccatat gcactgccgc ctgctcatga cgaactaaaa catgatcgat accacccacg
    31501 gtatgcaatg catcgtaaat atcaaggact gcgcctccag gataaccgaa tacttgttta
    31561 acgccctgat cgataagcga tcggacgacc atctcggctc cagacaacat ctccatggcc
    31621 tgcctcactg tttgatggaa aaaatgtgta aaacacatta accgtccgat cttgcttaag
    31681 caattggcag ccagagacat aaacgcaggg taataagaat aaacaggagg aaagatgaaa
    31741 agaaacgata aaatcctcca ttacgaagga ttaaattgat aataaatcgg ctgaatccca
    31801 caacttacag caatttctct atttttttaa ttaatcctaa aatagagagc ccacacattc
    31861 agaataaaat tctacattca ataaaaaatg cagaataaac cagacattca tgtctgacct
    31921 attctgcatt cagttagcgt ttgcaaattg agactaattg ttcttccatc cactgatggc
    31981 ctttatcgcg cccggcagct tcatgccatg agagataaca ggttctgctg ttttgtttta
    32041 acggcagcgg taatacctgt aattctaagg attcagcgaa ctcttcagcc agccaacgcg
    32101 gcgcaatagc gaccaaatgc gtttgcgaca ccacgctaag tacgctcatc attgccatgc
    32161 cctgatacgc gatactggct tgcttatcta ccgtgtcata ccaaggttga ctaaatgacg
    32221 cgaaacgatc gagcgaaacc gccgcatgtt gttcgttata aacatcatgt ttcagtaacg
    32281 ggcctttaat tgttggatga tttttgctgg ctaccagcac catttcatct ttaaataatg
    32341 gcacgctggt aaattcagga cgatggaagt cttcataact aatcacaaac tccgtttcct
    32401 gataacgcag ctgatgttca gtgttctgat ttaatgaaga cttgaacata acatgtatat
    32461 ttggcgcaat ctgctcaatg tgattataaa tctgcgaggt cagaatgctg tctaacgggc
    32521 tgcaaacaca aagatgaaat acacgttcac tactcgcggg ttcaaaacct gaaccaggca
    32581 attcattttg tactagttgc aatgcctggc gaactgaacc aaaaagttga aatgcgcgag
    32641 cagtcggttg aataccacgg ccataacgaa caaaaagctc gtcattaaac atcaccttca
    32701 ggcgtgcaac agcgttactg accgcaggtt gcgacatacc cagaacatga gcggcacggg
    32761 taatgttttg ctcctgcatc acggcatcga aaacggttaa taagttgaga tcgaccatgc
    32821 gtagctgtgg cttgcttaac tccgccgtct ctgaatgatc tgtttgtacc tctggcatac
    32881 ttaactccac tgtcacactt aactcccttt cccttattgg aatgcagaga aataatcctg
    32941 aagaatatga tttatc
//
LOCUS       DADKRT010000024        32818 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.024, whole genome shotgun sequence.
ACCESSION   DADKRT010000024 DADKRT010000000
VERSION     DADKRT010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 32818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32818
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.024"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(312..524)
                     /gene="rpmE"
                     /locus_tag="JQ356_000967"
     CDS             complement(312..524)
                     /gene="rpmE"
                     /locus_tag="JQ356_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HAY4621134.1"
                     /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF
                     TGKQRDVATGGRVDRFNKRFNIPGSK"
     gene            727..2925
                     /gene="priA"
                     /locus_tag="JQ356_000968"
     CDS             727..2925
                     /gene="priA"
                     /locus_tag="JQ356_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HAY4621135.1"
                     /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG
                     VVVSVSDVSELPLNELKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI
                     LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF
                     NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL
                     DLKGQKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPMFPGVPIS
                     RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
                     DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
                     RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWILGPVPALAPK
                     RGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRKVKWVLDVDPIEG"
     gene            3081..4106
                     /gene="cytR"
                     /locus_tag="JQ356_000969"
     CDS             3081..4106
                     /gene="cytR"
                     /locus_tag="JQ356_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HAY4621136.1"
                     /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV
                     EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI
                     GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
                     LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVD
                     PQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS
                     IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR
                     GSTRALP"
     gene            4198..5157
                     /gene="ftsN"
                     /locus_tag="JQ356_000970"
     CDS             4198..5157
                     /gene="ftsN"
                     /locus_tag="JQ356_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HAY4621137.1"
                     /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL
                     VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP
                     SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ
                     QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTT
                     AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK
                     ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG"
     gene            5250..5780
                     /gene="hslV"
                     /locus_tag="JQ356_000971"
     CDS             5250..5780
                     /gene="hslV"
                     /locus_tag="JQ356_000971"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HAY4621138.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC
                     IYTNHFHTIEELSYKA"
     gene            5790..7121
                     /gene="hslU"
                     /locus_tag="JQ356_000972"
     CDS             5790..7121
                     /gene="hslU"
                     /locus_tag="JQ356_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HAY4621139.1"
                     /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR
                     KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI
                     KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA
                     RRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL"
     gene            7188..8114
                     /gene="menA"
                     /locus_tag="JQ356_000973"
     CDS             7188..8114
                     /gene="menA"
                     /locus_tag="JQ356_000973"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HAY4621140.1"
                     /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL
                     VALLALITAGLLQILSNLANDYGDAVKGSDRPDRIGPLRGMQKGVITQQEMKRALIIT
                     VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV
                     FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV
                     RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP
                     VAMRPMLERTVKGALLTNLLFILGIFLSQWAA"
     gene            8207..8692
                     /gene="rraA"
                     /locus_tag="JQ356_000974"
     CDS             8207..8692
                     /gene="rraA"
                     /locus_tag="JQ356_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HAY4621141.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(8777..9022)
                     /gene="zapB"
                     /locus_tag="JQ356_000975"
     CDS             complement(8777..9022)
                     /gene="zapB"
                     /locus_tag="JQ356_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HAY4621142.1"
                     /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ
                     NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV"
     gene            9448..10293
                     /gene="glpF"
                     /locus_tag="JQ356_000976"
     CDS             9448..10293
                     /gene="glpF"
                     /locus_tag="JQ356_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol uptake facilitator protein GlpF"
                     /protein_id="HAY4621143.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAA
                     LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG
                     WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVKEKETTTPSE
                     QKASL"
     gene            10316..11824
                     /gene="glpK"
                     /locus_tag="JQ356_000977"
     CDS             10316..11824
                     /gene="glpK"
                     /locus_tag="JQ356_000977"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HAY4621144.1"
                     /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG
                     WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI
                     VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRSE
                     LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEV
                     RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
                     GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA
                     TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV
                     LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
                     AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE"
     gene            11959..12969
                     /gene="glpX"
                     /locus_tag="JQ356_000978"
     CDS             11959..12969
                     /gene="glpX"
                     /locus_tag="JQ356_000978"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY4621145.1"
                     /translation="MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVT
                     ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD
                     NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH
                     IL"
     gene            13066..13812
                     /gene="fpr"
                     /locus_tag="JQ356_000979"
     CDS             13066..13812
                     /gene="fpr"
                     /locus_tag="JQ356_000979"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HAY4621146.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID
                     GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK
                     RYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(13817..14245)
                     /gene="uspD"
                     /locus_tag="JQ356_000980"
     CDS             complement(13817..14245)
                     /gene="uspD"
                     /locus_tag="JQ356_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspD"
                     /protein_id="HAY4621147.1"
                     /translation="MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLS
                     ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE
                     QCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK"
     gene            complement(14272..14571)
                     /locus_tag="JQ356_000981"
     CDS             complement(14272..14571)
                     /locus_tag="JQ356_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 domain-containing protein"
                     /protein_id="HAY4621148.1"
                     /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM
                     TKLKELAAAASSVDEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA"
     gene            complement(14783..15223)
                     /locus_tag="JQ356_000982"
     CDS             complement(14783..15223)
                     /locus_tag="JQ356_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY4621149.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG
                     CFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN"
     gene            15324..15923
                     /locus_tag="JQ356_000983"
     CDS             15324..15923
                     /locus_tag="JQ356_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HAY4621150.1"
                     /translation="MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDL
                     SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK
                     SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
                     TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK"
     gene            16031..16798
                     /gene="tpiA"
                     /locus_tag="JQ356_000984"
     CDS             16031..16798
                     /gene="tpiA"
                     /locus_tag="JQ356_000984"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HAY4621151.1"
                     /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE
                     MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(16853..17608)
                     /gene="cdh"
                     /locus_tag="JQ356_000985"
     CDS             complement(16853..17608)
                     /gene="cdh"
                     /locus_tag="JQ356_000985"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HAY4621152.1"
                     /translation="MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLP
                     NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW
                     LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLAN
                     ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQS
                     DNSFVLLATQRNLLTLNRASAEEIQDHQCEILR"
     gene            complement(17715..18704)
                     /locus_tag="JQ356_000986"
     CDS             complement(17715..18704)
                     /locus_tag="JQ356_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4621153.1"
                     /translation="MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQQTGDNVVMRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK
                     NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR"
     gene            complement(19024..19986)
                     /gene="pfkA"
                     /locus_tag="JQ356_000987"
     CDS             complement(19024..19986)
                     /gene="pfkA"
                     /locus_tag="JQ356_000987"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HAY4621154.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
                     HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY"
     gene            complement(20167..21069)
                     /gene="fieF"
                     /locus_tag="JQ356_000988"
     CDS             complement(20167..21069)
                     /gene="fieF"
                     /locus_tag="JQ356_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312867.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HAY4621155.1"
                     /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV
                     DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI
                     QHLISPTPMIDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM
                     NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEI
                     IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP
                     GSDVIIHQDPCSVVPREGKRSMLS"
     gene            complement(21217..21729)
                     /gene="cpxP"
                     /locus_tag="JQ356_000989"
     CDS             complement(21217..21729)
                     /gene="cpxP"
                     /locus_tag="JQ356_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HAY4621156.1"
                     /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQRS
                     TQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQ
                     AEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLK
                     LLSSSNSRSQ"
     gene            21879..22577
                     /gene="cpxR"
                     /locus_tag="JQ356_000990"
     CDS             21879..22577
                     /gene="cpxR"
                     /locus_tag="JQ356_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HAY4621157.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            22574..23947
                     /gene="cpxA"
                     /locus_tag="JQ356_000991"
     CDS             22574..23947
                     /gene="cpxA"
                     /locus_tag="JQ356_000991"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HAY4621158.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTV
                     NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
                     LPLYKRS"
     gene            complement(24053..24727)
                     /gene="yiiM"
                     /locus_tag="JQ356_000992"
     CDS             complement(24053..24727)
                     /gene="yiiM"
                     /locus_tag="JQ356_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418346.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HAY4621159.1"
                     /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ
                     AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD
                     IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL
                     ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFS
                     RRLWGK"
     gene            complement(24876..25841)
                     /gene="kdgT"
                     /locus_tag="JQ356_000993"
     CDS             complement(24876..25841)
                     /gene="kdgT"
                     /locus_tag="JQ356_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate transporter"
                     /protein_id="HAY4621160.1"
                     /translation="MRKSRGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVSI
                     LAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAG
                     LSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASF
                     EPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGL
                     LGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPMLIAEMVPAFKP
                     MAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK"
     gene            complement(26120..26740)
                     /gene="sodA"
                     /locus_tag="JQ356_000994"
     CDS             complement(26120..26740)
                     /gene="sodA"
                     /locus_tag="JQ356_000994"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HAY4621161.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            27024..28058
                     /gene="rhaT"
                     /locus_tag="JQ356_000995"
     CDS             27024..28058
                     /gene="rhaT"
                     /locus_tag="JQ356_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HAY4621162.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV
                     SWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLLNTEGGRMTLLGVLVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     IIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFY
                     AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA
                     ANIVGIGMAN"
     gene            complement(28055..28993)
                     /gene="rhaR"
                     /locus_tag="JQ356_000996"
     CDS             complement(28055..28993)
                     /gene="rhaR"
                     /locus_tag="JQ356_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709710.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HAY4621163.1"
                     /translation="MAFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFA
                     SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD
                     KHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVI
                     GQLEHESSQHVSFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAAS
                     LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD
                     ISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD"
     gene            complement(28977..29813)
                     /gene="rhaS"
                     /locus_tag="JQ356_000997"
     CDS             complement(28977..29813)
                     /gene="rhaS"
                     /locus_tag="JQ356_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HAY4621164.1"
                     /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL
                     PQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS
                     SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR
                     YLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGF
                     LQ"
     gene            30101..31513
                     /gene="rhaB"
                     /locus_tag="JQ356_000998"
     CDS             30101..31513
                     /gene="rhaB"
                     /locus_tag="JQ356_000998"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HAY4621165.1"
                     /translation="MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHS
                     QNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY
                     RDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
                     PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG
                     HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINP
                     NDDRFINPEAMCSEIQAACRETAQPIPESDAELAQLRGEDFSQLHIVGGGCQNTLLNQ
                     LCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDS
                     EIAHYVAQLHSTRQTKELCA"
     gene            31510..32769
                     /gene="rhaA"
                     /locus_tag="JQ356_000999"
     CDS             31510..32769
                     /gene="rhaA"
                     /locus_tag="JQ356_000999"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HAY4621166.1"
                     /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
                     VSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESD
                     TPVSRDQIKPEHFKNWGEWAKANQLGLDFNPSCFSHPLSADGFTLSHPDDSIRQFWID
                     HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISKKLNP
                     AHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAA
                     MLYVPQLLLHVSRPVRWDCDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINR
                     IAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYC
                     QRHDTPAGSEWLESVRAYEKEILSQRG"
BASE COUNT         8040 a         8535 c         8506 g         7737 t
ORIGIN      
        1 ggattgaccg gatggccgga cgtcaccccg ccggggcaca ctgaacaggc cacgccggtg
       61 ggagcaccaa tgcgcacccc ggctgaaccc tgaacaatgc taccgccata ctgcgtcatg
      121 tcgccctgac gcgccgccgg ttttccgctc atcgtaaaat ccttttgaaa taaataagaa
      181 ccagaagcct agcgccagtc aacaacagga aatgataatg agttaacacc ccggaatttt
      241 tcagaattta taaaaggcaa aattcaggca caaaaaaagc gccgtgcggc gcttttttcg
      301 gaaatccggt cttatttgct gcccgggatg ttgaaacgct tgttgaagcg gtcaacacgg
      361 ccaccggtag caacatcacg ctgtttgcca gtgaagaacg ggtggcactt gctgcacacg
      421 tcgaggttca ggtcatgacc aacagtggag cggattttca ttacgttacc gcaagagcag
      481 ctagcagtaa tttcttcgta tttcgggtga atatcttttt tcatgggaaa acctcggttt
      541 aaggccgcgt cgctcttcca gccctaacgc cagacaccac gcgatgttaa aagtatagct
      601 tcaatacgat catttcgtac gaaggcgcga aatcatacag aaattaacca acgtatgcaa
      661 actgatccgc actcttctac ggcaatgtgt atactaaccc accgaatttc aagtcaggat
      721 gatgctatgc ccgttgccca cgttgccttg cccgttccgc ttcctcgtac ctttgactat
      781 ctgctgccag aaggcatgac ggttaaagcc gggtgtcgcg tgcgcgtgcc gtttggcaaa
      841 cagcaggagc gcatcggggt tgtggtgtca gttagcgatg tcagtgagct gccgcttaac
      901 gagctgaaag cggtagtgga agtgctggac gttgagccgg tatttactca ctccgtctgg
      961 cggttactgc tctgggcggc agattactat catcatccga ttggcgatgt gctgtttcat
     1021 gccttgccga ttttactgcg ccaggggcgg cctgcggcga acgcgccgat gtggtactgg
     1081 tttgccactg aacaaggcca ggcggtggat ctgaacagcc tgaaacgctc ccccaagcaa
     1141 caacaggcgc tggcggcgtt acggcaaggc aaaatctggc gcgaccaggt cgccacgctc
     1201 gaatttaatg atgccgcgtt gcaggcgcta cgcaaaaaag gtctgtgtga tttagcaagt
     1261 gaaacaccag agtttagcga ctggcgaacg aactatgccg tttctggtga gcggttgcga
     1321 ttgaataccg aacaggccac cgccgttggc gcaattcata gcgcggcaga tactttttct
     1381 gcctggctgc tggcgggcgt taccggttcc ggtaaaacgg aggtttatct cagtgtactg
     1441 gaaaacgtgc tcgctcaggg caaacaggcg ctggtgatgg tgccggaaat cggcctgaca
     1501 ccgcaaacta tcgcccgttt tcgtgaacgt tttaatgccc ccgtggaagt tctgcattcc
     1561 ggcctgaacg acagcgagcg gctttctgcg tggttgaaag cgaaaaatgg cgaggcggcg
     1621 attgtgatcg gcacccgctc cgcgctgttt acgccgttta aaaatctcgg cgtgattgtc
     1681 attgatgaag agcacgacag ctcctacaag cagcaggaag gctggcgcta tcatgcccgc
     1741 gacctggcgg tgtatcgtgc gcacagcgag caaatcccga ttattcttgg ctccgcaacg
     1801 cccgcgctgg aaacgttatg caacgtccag cagaaaaaat accgcctgct gcgcctgacc
     1861 cgtcgggcag ggaatgctcg tccggcaatt caacatgtgc tggatttaaa aggtcagaag
     1921 gtgcaggcag gtctggctcc ggcgttaatc acccgtatgc gccagcattt acaggccaac
     1981 aatcaggtta tcctctttct taatcgtcgg ggttttgcgc ctgcgctgct gtgccacgac
     2041 tgcggctgga tagccgaatg cccacgttgc gatcactact acacgctgca tcaggcgcaa
     2101 cagcatttgc gctgtcacca ctgtgacagt cagcgtccgg tgccgcgcca gtgcccttcc
     2161 tgcggttcca cgcacctggt ccccgtgggg ctgggcaccg aacagcttga acagacgctt
     2221 gcgccgatgt tccccggcgt gcccatttca cgtatcgacc gcgataccac cagccgcaaa
     2281 ggggcactgg aacagcaact ggcggaagtg catcgcggcg gcgcgaggat tttgatcggc
     2341 acacaaatgc tggcgaaagg tcaccacttt ccggatgtga cgctggtggc gttactggat
     2401 gtggacggcg cgctgttttc tgccgatttt cgctcggcag aacgtttcgc ccagctttac
     2461 acccaggtcg ccggtcgtgc cgggcgtgcg ggtaaacagg gcgaagtggt gctgcaaacg
     2521 caccatccgg aacatcctct gttgcaaacg ttgctctata aaggctacga cgcctttgcc
     2581 gaacaggcgc tggctgagcg acgcatgatg cagctgccgc cgtggaccag ccatgtgatt
     2641 gtgcgtgcgg aagatcataa caatcagcac gcgccgctgt tcctgcaaca actgcgtaat
     2701 ctgatccttt ccagcccgct ggcagacgac aaactgtgga ttctcggccc ggttccggct
     2761 ctggcaccta agcgtggtgg ccgctggcgc tggcagatct tgttgcagca cccttcccgc
     2821 gtgcgcttgc aacacatcat tagtggtacg ctggcgctta ttaatacaat accggattcc
     2881 cgcaaggtga aatgggtgtt ggatgtcgat cccatcgaag gctaatgcgc aaacgttgcg
     2941 aggcggatcg aaaaattcaa tattcatcac acttttcatg aaaattctgt aaccgttttc
     3001 acgcgctatc tgctaaaaat gttgccgatg tgaagtaaac atggatgtag tacgcctgac
     3061 gtaccaggcg aggagtgagt gtgaaagcga agaagcagga aactgccgcg accatgaaag
     3121 acgttgccct caaggcaaaa gtctctacag cgactgtctc ccgagcatta atgaatcccg
     3181 ataaagtctc ccaggccacc cgtaatcggg ttgaaaaagc ggcccgggaa gtgggttatt
     3241 taccgcagcc tatggggcgc aacgtcaagc gtaatgaatc ccgcaccatt ctggtgattg
     3301 tcccggatat ctgcgatccc ttctttagcg aaattattcg cggtatcgaa gttacggcgg
     3361 caaatcacgg atatctggtg ctgattggcg actgtgcgca tcaaaatcag caggaaaaaa
     3421 cctttatcga tttgatcatc accaagcaaa ttgatggcat gttgctgctg ggttcaaggc
     3481 tgccgtttga tgccagcatt gaggaacagc gtaatctgcc gccgatggtg atggcgaacg
     3541 aatttgcacc ggaactggag ctgcctaccg ttcatatcga caatctgacc gccgcatttg
     3601 atgcagtaaa ttatttatat gagcaagggc ataaacggat tggctgtata gccggtcccg
     3661 aagagatgcc actgtgtcac taccgcctgc aaggctatgt tcaggcgctg cgtcgctgcg
     3721 gaattatggt tgatccacaa tacatcgccc gtggcgactt caccttcgaa gccggaagca
     3781 aagcaatgca acagctgctt gatcttccac aaccgcctac tgcagtcttc tgccatagcg
     3841 atgtgatggc gctcggcgca ctttctcagg caaaacgcca ggggctgaaa gtcccggaag
     3901 acctttccat aatcggtttt gataacatcg acctgacgca attttgtgat ccgccgctga
     3961 caaccatcgc gcagccgcgt tacgaaatcg gtcgggaagc tatgctgtta ttgcttgatc
     4021 aaatgcaggg gcaacacgtt ggcagtggct ctcgtttaat ggactgcgaa cttatcatcc
     4081 ggggatcaac acgcgcgtta ccttaaagta aacctttaag actgccgtga ctggtcaaag
     4141 gcccgccgct taagtaacat ggcgggctga cgaacgaata aatacagcga aacgatagtg
     4201 gcacaacgag attatgtacg ccgcagccaa ccggcacctt cgcggcgaaa aaagagcacc
     4261 tcacggaaaa agcaacgaaa tctgcctgcg gtttctcccg ctatggtcgc tattgctgcc
     4321 gccgttcttg tgacctttat cggtggtctg tacttcatta cgcatcacaa gaaagaagag
     4381 tccgagacgc tgcaaagcca gaaagtgacc ggaaacggac taccaccaaa accagaagaa
     4441 cgctggcgct acattaaaga gctggaaagt cgccagccgg gtgtgcgtgc gcccacagaa
     4501 ccttctgccg gtggtgaagt gaaaacgccg gagcaactga caccagaaca acgtcagctt
     4561 cttgaacaaa tgcaggctga tatgcgccag cagccaacgc agctggttga ggttccgtgg
     4621 aatgaacaga cgccggaaca gcgtcagcaa acgctacaac gccagcgtca ggcgcagcaa
     4681 ttagcggagc agcaacgcct ggctcagcag tcgcgtacga ctgaacaaag ctggcagcag
     4741 cagacgcgta cgtcgcaagc cgcgccggta caggcgcaac cgcgccagtc taaaccagct
     4801 tctactcagc agccgtacca ggatctgctg caaacccctg cgcacacgac cgcgcagtcg
     4861 aagccgcagc aagctgcacc ggttgctcgt gccgctgacg cgccaaaacc gacggcggag
     4921 aaaaaagacg aacgccgctg gatggtgcag tgcggttcgt tcagaggcgc ggaacaggca
     4981 gagacggtac gtgctcagct ggcgttcgaa ggatttgact cgaaaatcac caccaacaat
     5041 ggctggaatc gtgtggtcat tggcccggtg aaaggcaaag agaacgcaga cagcaccctc
     5101 aatcggttga agatggcggg tcatacaaac tgcattcggc tcgccgccgg gggttgaaac
     5161 cctcaaaatc ccccccatct ataattgcat tatgcctcgt acttttgtac ggggtttgta
     5221 ctctgtattc gtaaccaagg ggtcagctcg tgacaactat agtaagcgta cgccgtaacg
     5281 gccatgtggt catcgctggt gatggtcagg ccacgttggg caataccgta atgaaaggca
     5341 acgtgaaaaa ggtccgccgt ctgtacaacg acaaagtcat cgcgggcttt gcgggcggta
     5401 ctgcggatgc ttttacgctg ttcgaactgt ttgaacgtaa actggaaatg catcagggcc
     5461 atctggttaa agccgccgtt gagctggcaa aagactggcg taccgatcgc atgctgcgca
     5521 aacttgaagc actgctggca gtcgcggatg aaactgcatc gcttatcatc accggtaacg
     5581 gtgacgtggt gcagccagaa aacgatctta ttgctatcgg ctccggcggc ccttacgccc
     5641 aggctgcggc gcgcgcgctg ttagaaaaca ctgaacttag cgcccgtgaa attgctgaaa
     5701 aggcgttgga tattgcaggc gacatttgca tctataccaa ccatttccac accatcgaag
     5761 aattaagcta caaagcgtaa ggatctccca tgtctgaaat gaccccacgc gaaatcgtca
     5821 gcgaactgga taagcacatc atcggccagg acaacgccaa gcgttctgtg gcgattgctc
     5881 tgcgtaaccg ctggcgtcgc atgcagctca acgaagagct gcgccatgaa gtgaccccga
     5941 aaaatatcct gatgatcggc ccgaccggtg tcggtaaaac tgaaatcgcc cgtcgtctgg
     6001 ctaagctggc gaatgcgccg ttcatcaaag ttgaagcgac caaattcacc gaagtgggct
     6061 atgtcggtaa ggaagtggat tctattattc gcgatctgac cgatgccgcc gtgaaaatgg
     6121 tacgcgtcca ggctatcgag aaaaaccgtt atcgcgctga agaactggca gaagaacgta
     6181 ttctcgacgt gctgatccca cctgctaaaa acaactgggg acagaccgaa cagcagcagg
     6241 aaccgtccgc tgctcgtcag gcattccgca aaaaactgcg tgaaggccag cttgatgaca
     6301 aagaaatcga gatcgatctt gccgcagcac cgatgggcgt tgaaattatg gctcctccag
     6361 gcatggaaga gatgaccagc cagctgcagt ccatgttcca gaacctgggc ggccagaagc
     6421 aaaaagcgcg taagctgaaa atcaaagacg ccatgaagct gctgattgaa gaagaagcgg
     6481 cgaaactggt gaacccggaa gagctgaagc aagacgctat cgacgctgtt gagcagcacg
     6541 ggatcgtgtt tatcgacgaa atcgacaaaa tctgtaagcg cggcgagtct tccggtccgg
     6601 atgtttctcg tgaaggcgtt cagcgtgacc tgctgccgct ggtagaaggt tgcaccgttt
     6661 ccaccaaaca cgggatggtc aaaactgacc acattctgtt tatcgcttct ggcgcgttcc
     6721 agattgcgaa accgtctgac ctaatcccgg aactgcaagg tcgtctgcca atccgcgttg
     6781 aactgcaggc actgaccacc agcgacttcg agcgtattct gaccgagccg aatgcctcta
     6841 tcaccgtgca gtacaaagca ctgatggcga ctgaaggcgt aaatatcgag tttaccgact
     6901 ccggtattaa acgcatcgcg gaagcggcat ggcaggtgaa cgaatctacc gaaaacatcg
     6961 gtgctcgtcg tttacacact gttctggagc gtttaatgga agagatttcc tacgacgcca
     7021 gcgatttaag cggtcaaaat atcactattg acgcagatta tgtgagcaaa catctggatg
     7081 cgttggtggc agatgaagat ctgagccgtt ttatcctata atcgcgttca atcattttca
     7141 tcattgtttg atggggctga aaggccccat ttttattggc gcgtattatg actgaacaac
     7201 aaattagccg aactcaggcg tggctggaaa gtttacgacc taaaaccctc cccctcgcct
     7261 ttgctgcaat tatcgtcggg acggcgctgg catggtggca aggtcatttt gatccgctgg
     7321 tcgccctgct ggcactgatt accgccgggc tattacagat cctttctaac ctcgccaatg
     7381 attacggcga tgcggtaaaa ggcagcgata gacctgaccg cattgggccg ctacgcggca
     7441 tgcaaaaagg ggtcattacc cagcaagaga tgaaacgggc gctcattatt accgtcgtgc
     7501 tcatctgtct ctccgggctg gcactggttg cagtggcgtg ccatacgctg gctgattttg
     7561 tcggtttcct gattcttggc gggttgtcga tcattgccgc tatcacctac accgtgggca
     7621 atcgtcctta tggttatatc ggtctggggg atatttccgt actggttttc tttggctggt
     7681 taagcgtcat ggggagctgg tatttacagg ctcatacatt gattccggca ctgatccttc
     7741 cggcgaccgc atgcggcctg ctggcaacgg cagtactgaa cattaataac ctgcgtgata
     7801 tcaatagcga ccgagaaaac ggcaaaaaca cgctggtggt gcgcttaggt gaagtgaacg
     7861 cgcgtcgtta tcatgcctgc ctgctgatgg gctctctggt atgtctggcg ctgtttaatc
     7921 tcttttcgct gcatagcctg tggggctggc tgttcctgct ggcggcaccg ttgctggtga
     7981 agcaagcccg ttatgtgatg cgggaaatgg acccggtggc gatgcgaccg atgctggaac
     8041 gcactgtcaa gggggcgtta ctgactaacc tgctgtttat tttagggata ttcctaagcc
     8101 agtgggcagc ataactgaca aatatcaatt aacaattgat gattttgcca acagcccaca
     8161 tagcgcgata tactgaaaat tctcgcagca actgaatgtt aagcctatga aatacgatac
     8221 ttccgagctt tgtgacatct atcaagaaga tgttaacgtc gtggaaccgc tgttctccaa
     8281 ctttggcgga cgggcgtcgt ttggcggaca aataatcacg gtaaaatgtt tcgaggacaa
     8341 cgggttgctg tacgatctgc tcgaacagaa tggccgtggt cgtgttcttg tcgtcgatgg
     8401 cggtggttct gttcgtcgcg cactggtcga tgctgaactg gcgcgtctgg cagtacaaaa
     8461 tgaatgggaa ggtctggtta tttacggcgc ggtgcgtcag gtagatgacc tggaagagtt
     8521 ggatatcggc atccaggcga tggcggcaat tccggttggt gccgctggcg aaggcattgg
     8581 cgaaagcgat gtccgcgtca attttggcgg tgtaaccttc ttctccggcg accatcttta
     8641 tgccgacaat accgggatta ttctttcaga agatccgctg gatattgaat gataagaaag
     8701 gcaccgcaag gtgccttttt tctgcgttac ctgttggcct acacagtaaa gaaattacgc
     8761 gaaagatgaa gcgtaatcag acctcttcca tgcgacccag cagggcctgc agacgttcct
     8821 gccagccgtt ctgctgttct ttcagatggt tgttctcacg ctccagctct tcgcgctgat
     8881 gctgggcatt ttgaacttcc tgcgacagtg agttgttttt ttctttcagc tcttcgattt
     8941 ccatctgcaa cagagtgatg gtatcaatcg cctgctgtac ttttgcttcc agtttctcaa
     9001 acacttctaa tgacattgtc atacctctcc tgaattgcaa ggcgttgatg gataaaaaat
     9061 cctcgtcccg attaccggtg acgccttaat aaatacgagc gcactttagt tagctccgat
     9121 tgtatgaagc cgcgccatcg ctgtccagcg gcacgccttg cagattacgg tttgccacac
     9181 ttttcatcct tctcctggtg acataatcca catcaatcga aaatgttaat aaatttgttg
     9241 cgcgaatgat ctaacaaaca tgcatcatgt acaatcagat ggaataaatg gcgcgataac
     9301 gctcatttta tgacgaagca cacacatttt aagttcgata tttctcgttt ttgctcgtta
     9361 acgataagtt tacagcatgc ctacaagcat cgtggaggtc cgtgactttc acgcatacaa
     9421 caaacattaa ctcttcagga tccgattatg agtcaaacat caaccttgaa aggccagtgc
     9481 attgctgaat tcctcggtac cgggttgttg atttttttcg gtgtgggttg cgttgcagca
     9541 ctaaaagtcg ctggtgcgtc ttttggtcag tgggaaatca gtgtcatttg gggactgggg
     9601 gtggcaatgg ctatctacct gaccgcaggg gtttccggcg cgcatcttaa tcccgctgtt
     9661 accattgcat tgtggctgtt tgcctgtttc gacaagcgca aagttattcc ttttatcgtt
     9721 tcacaagttg ccggcgcttt ctgtgctgcg gctttagttt acgggcttta ctacaattta
     9781 tttttcgact tcgagcagac tcatcacatt gttcgcggca gcgttgaaag tgttgatctg
     9841 gcaggcactt tctctactta ccctaatcct catatcaatt ttgtgcaggc tttcgcagtt
     9901 gagatggtga ttaccgctat tctgatgggg ctgatcctgg cgttaacgga cgatggcaac
     9961 ggtgtaccac gcggcccttt ggctcccttg ctgattggtc tactgattgc ggtcattggc
    10021 gcatctatgg gcccattgac gggttttgcc atgaacccag cgcgtgactt cggtccgaaa
    10081 gtctttgcct ggctggcggg ctggggcaat gtcgccttta ccggcggcag agacattcct
    10141 tacttcctgg tgccgctttt tggccctatc gttggcgcga ttgtaggtgc atttgcctac
    10201 cgcaaactga ttggtcgcca tttgccttgc gatatctgtg ttgtgaaaga aaaggaaacc
    10261 acaactcctt cagaacaaaa agcttcgctg taatatgact acgggacaat taaacatgac
    10321 tgaaaaaaaa tatatcgttg cgctcgacca gggcaccacc agctcccgcg cggtcgtaat
    10381 ggatcacgat gccaatatca ttagcgtgtc gcagcgcgaa tttgagcaaa tctacccaaa
    10441 accaggttgg gtagaacacg acccaatgga aatctgggcc acccaaagct ccacgctggt
    10501 agaagtgctg gcgaaagccg atatcagttc cgatcaaatt gcagctatcg gtattacgaa
    10561 ccagcgtgaa accactattg tctgggaaaa agaaaccggc aagcctatct ataacgctat
    10621 tgtctggcag tgccgtcgta ccgcagaaat ctgcgagcat ttaaaacgtg acggtttaga
    10681 agattatatc cgcagcaata ccggtctggt gattgacccg tacttttctg gcaccaaagt
    10741 gaagtggatc ctcgaccatg tggaaggctc tcgcgagcgt gcacgtcgta gtgaattgct
    10801 gtttggtacg gttgatacgt ggcttatctg gaaaatgact cagggccgtg tccatgtgac
    10861 cgattacacc aacgcctctc gtaccatgtt gttcaacatc cataccctgg actgggacga
    10921 caaaatgctg gaagtgctgg atattccgcg cgagatgctg ccagaagtgc gtcgttcttc
    10981 cgaagtatac ggtcagacta acattggcgg caaaggcggc acgcgtattc caatctccgg
    11041 gatcgccggt gaccagcagg ccgcgctgtt tggtcagttg tgcgtgaaag aagggatggc
    11101 gaagaacacc tatggcactg gctgctttat gctgatgaac actggcgaga aagcggtgaa
    11161 atcagaaaac ggcctgctga ccaccatcgc ctgcggcccg actggcgaag tgaactatgc
    11221 gttggaaggt gcggtgttta tggcaggcgc atccattcag tggctgcgcg atgagatgaa
    11281 gttgattaac gacgcctacg attccgaata tttcgccacc aaagtgcaaa acaccaatgg
    11341 tgtgtatgtg gttccggcat ttaccgggct gggtgcgccg tactgggacc cgtatgcgcg
    11401 cggggcgatt ttcggtctga ctcgtggggt gaacgctaac cacattatac gcgcgacgct
    11461 ggagtctatt gcttatcaga cgcgtgacgt gctggaagcg atgcaggccg actctggtat
    11521 ccgtctgcac gccctgcgcg tggatggtgg cgcagtagca aacaatttcc tgatgcagtt
    11581 ccagtccgat attctcggca cccgtgttga gcgcccggaa gtgcgcgaag tcaccgcatt
    11641 gggtgcggcc tatctcgcag gcctggcggt tggcttctgg cagaacctcg acgagctgca
    11701 agagaaagcg gtgattgagc gcgagttccg tccaggcatc gaaaccactg agcgtaatta
    11761 ccgttacgca ggctggaaaa aagcggtcaa acgcgcgatg gcgtgggaag aacacgacga
    11821 gtaatgtaaa tgccggatga agcgtttatg ccgcatccgg tagtcctgaa acgtgcgggg
    11881 gcaaccccgc acacatcaat aatcccaccc ttcccctgtg ctacacttcg cgccattcct
    11941 tactgcttag agtttgctat gagacgagaa cttgccatcg aattttcccg cgtcaccgaa
    12001 tctgcggcgc tggctggcta caaatggtta ggacgcggcg ataaaaacac cgcggacggc
    12061 gcggcggtaa acgccatgcg tattatgctc aaccaggtca acattgacgg caccatcgtc
    12121 attggtgaag gtgaaatcga cgaagcaccg atgctctaca ttggtgaaaa agtcggtact
    12181 ggtcgcggcg acgcggtaga tattgctgtt gatccgattg aaggcacgcg catgacggcg
    12241 atgggccagg ctaacgcgct ggcggtgctg gcagtaggcg ataaaggctg cttcctcaat
    12301 gcgccggata tgtatatgga gaagctgatt gtcgggccgg gagccaaagg caccattgat
    12361 ctgaacctgc cgctggcgga taacctgcgc aatgtagcgg cggcgctcgg caaaccgttg
    12421 agcgaactga cggtaacgat tctagctaaa ccacgccacg atgccgttat cgctgaaatg
    12481 cagcaactcg gcgtacgcgt atttgctatt ccggatggcg acgttgcggc ctcaattctc
    12541 acctgtatgc cagacagcga agttgacgtg ctgtacggta ttggtggcgc gccggaaggc
    12601 gtagtttctg cggcggtgat ccgcgcatta gatggcgaca tgaacggtcg tctgctggcg
    12661 cgtcatgacg tcaaaggcga caacgaagag aatcgtcgca ttggcgagca ggagctggca
    12721 cgctgcaaag cgatgggcat cgaagccggt aaagtattgc gcctgggcga tatggcgcgc
    12781 agcgataacg tcatcttctc tgccaccggt attaccaaag gcgatctgct ggaaggcatt
    12841 agccgcaaag gcaatatcgc gactaccgaa acgctgctga tccgcggcaa gtcacgcacc
    12901 attcgccgca ttcagtccat ccactatctg gatcgcaaag acccggaaat gcaggtgcac
    12961 atcctctgat tgatttgatc gattgagcct tccagtcctt cgggactgga atttttttgt
    13021 tcggagaacg aagataaggc aagtcaatca aaacaggaga aaaacatggc tgattgggta
    13081 acaggcaaag tcactaaagt gcagaactgg accgacgccc tgtttagtct caccgttcac
    13141 gcccccgtgc ttccgtttac cgccgggcaa ttcaccaagc ttggccttga aatcgacggc
    13201 gaacgcgtcc agcgcgccta ctcctatgtt aactcgcccg ataatcccga tctggagttt
    13261 tacctggtca ccgtccccga tggcaaatta agcccacgat tggcggcact gaaaccaggc
    13321 gatgaagtgc aggtggttag cgaagcagct ggcttctttg ttctggatga agtaccagat
    13381 tgcgaaacgc tatggatgct ggcaaccggt acagcgattg gcccttattt atcgattctg
    13441 caactaggca aagatttaga tcgcttcaaa aatctggtcc tggttcacgc cgcacgttat
    13501 gccgccgact taagctattt gccactgatg caagaactgg aaaaacgcta cgaaggcaaa
    13561 ctgcgcattc agacggtggt cagtcgggaa acggcagcgg ggtcgctcac cggacggata
    13621 ccggcattaa ttgaaagtgg ggaactggaa agcgcgattg gcctgccgat gaataaagaa
    13681 accagccatg tgatgctgtg cggcaatcca cagatggtgc gcgatacaca acagttgctg
    13741 aaagagaccc ggcagatgac gaaacattta cgtcgccgac cgggccatat gacagcggag
    13801 cattactggt aagcggttac ttatcgataa acggcacgat gagcaaatcc gcactcatct
    13861 tattgatcat cccgcgatat gctggcatca aacggttgat aaatgagtga tgatgaccac
    13921 agacaaggag gtcgcactgc tctttttgca taatttccag cagtgtttcc ggcatttctc
    13981 cgcgttcaat acgcagtttt gtcttcggcc attgaatatt tttcgtcagt ttatacagct
    14041 tgttatccga cttattcttc aacaattgaa gaatatcttc tgttgcaggg aagtagatac
    14101 ccggatacaa ctcgcttaag ccatcatcaa tatgaattaa cgtcaggtga gcgtcattat
    14161 gtctggcgag ctccagagct ttattcacca gtaaggcatc ttcttcattc ccggaaattg
    14221 ccacgccaat gtgtttataa gccatgttta actccttcta aagcaactcc atcaagctaa
    14281 cgaacgcagt gataactcaa aaataatcat ctcggcctgg catgagaaag tgaaggccgc
    14341 atcaagctca acttgcccct ccagatcctt aatcttgtag gccacgctgg ccccttcatc
    14401 tacagaggat gcagcggcgg caagctcttt cagtttggtc ataaaagact ctgcttcttc
    14461 gcgggtggca aaaaagcgcg aaaacttact ggtacagttg tcgttatcaa tcaccgtacc
    14521 gatatcaatc gcacatcctt tagtactgca tttatctacg acatctttca tagggcacct
    14581 ctgtatattc gcctctctgt cgattacgac ttaagaataa tgcgccgtta agggaagaac
    14641 aaacaagtaa tgatcttatg gattaccatt ttttttgata ttgcttaagg tgaagagttc
    14701 agaaggattt tccgggtatt gtcatttgca tcgtggaaat aacaatcccg gaaaaaaata
    14761 gcagtaagag atatattaaa ggttaattac ttgatttatt gtcggcttta tacttcacat
    14821 cctgagtatc tttaccatat ttattttcgc cttgtgtgcc aacaaacgca ccaagatcga
    14881 taagcatcat caccagaatc aacgtcggga caaaacaccc caccgcccat tgccagacac
    14941 ccggtaaaat cgcccagtta cccgccagca gcatccacgc cacaatcatc agaaatgccc
    15001 atgcgccgga acgcccgcga tcatgcaagc gcttaacagt tactgccgct gttggccaaa
    15061 gcaagcacac aaggcaaaac gccgcggtct gaatatcgag taaattttta cccgccagtg
    15121 agaaaagcac cagcatgcct gcgaaccaca ggcctatcca aatccagaaa tcacggcgtc
    15181 caatacgccc tttaaatgag aataaccatt gctgtatggt catgtaagtt ccttgatggt
    15241 tgtcttttcc aggattctac ccttttgaca agggcgacag atatcgtttt aatcggagcc
    15301 agtcataaca aaaggtactg tcaatgaagc cagggtgtac gctgtttttt ctcttatgtt
    15361 ctgcattaac cgttacaaca acggcgcatg cacaaacacc agatacggca acgaccgcgc
    15421 cttatctgct ggctggagcc cctactttcg atctctccat cagccagttt cgagaagact
    15481 ttaacagcca gaatcctagc ctgccactga acgaatttcg tgccatcgac agcagtcccg
    15541 acaaagccaa tctcactcgt gctgcaagta aaattaacga gaacttgtat gcttctacag
    15601 cgctggagcg cggtacctta aaaatcaaaa gcattcaaat gacctggcta cccatccagg
    15661 ggccagagca aaaagcagcg aaagcgaaag ctcaggaata catggcagca gtgatccgca
    15721 cactcacccc attaatgacc aaaacacaaa gccagaaaaa actgcagtcg ctgctaacgg
    15781 cggggaaaaa caaacgttat tacaccgaga cagaaggtgc actgcgttat gttgtcgcgg
    15841 acaacggcga aaaggggctg accttcgctg ttgaaccgat taagctggcg ctatctgaat
    15901 cgcttgaagg tttgaataaa tgacaaaaag caaagccttt gtgccgatga atctctatac
    15961 tgtttcacag acctgctgcc ctgcggggcg gccatcttcc tttattcgct tataagcgtg
    16021 gagaattaaa atgcgacatc ctttagtgat gggtaactgg aaactgaacg gcagccgcca
    16081 catggttcac gagctggttt ctaacctgcg taaagagctg gcaggtgttg ctggctgtgc
    16141 ggttgcaatc gcaccaccgg aaatgtacat cgatatggcg aagcgcgaag ctgaaggcag
    16201 ccacatcatg ctgggtgcgc aaaacgtgga cctgaacctg tccggcgcat tcaccggtga
    16261 aacctctgct gctatgctga aagacatcgg cgcacagtac atcatcatcg gccactctga
    16321 acgtcgtact taccacaaag agtctgacga actgatcgcg aaaaaattcg cggtgctgaa
    16381 agagcagggt ctgactccgg ttctgtgcat cggtgaaacc gaagctgaaa acgaagcggg
    16441 caaaactgaa gaagtttgcg cacgtcagat cgacgcggta ctgaaaactc agggtgctgc
    16501 ggcattcgaa ggtgcggtta tcgcttacga acctgtatgg gcaatcggta ctggcaaatc
    16561 tgcaactccg gctcaggcac aggctgttca caaattcatc cgtgaccaca tcgctaaagt
    16621 tgacgctaac atcgctgaac aagtgatcat tcagtacggc ggctctgtaa acgcgtctaa
    16681 cgctgcagaa ctgtttgctc agccagacat cgacggcgcg ctggttggcg gtgcgtctct
    16741 gaaagctgac gctttcgcag taatcgttaa agctgcagaa gcggctaaac aggcttaagt
    16801 ctgacaggtg ccggatttca tatccggcac ttactttcct taactcttcg ccttaacgca
    16861 aaatctcaca ctgatgatcc tgaatttcct cggctgaagc acggttaagc gtcagtagat
    16921 ttcgttgtgt cgccagcaat acaaatgagt tatcactctg ccgtaccatc gccagcccgt
    16981 agcttcccat atgttcccgc gcctcaggta cttcttctgc cagcatcata aatgggctgc
    17041 gttgtaccag ttcgctttcc gttacccgac gcgccaggta ttcatgcccg cgcaaaccac
    17101 ctggcagtgg caaccagcgg ctgctgatgt tcgccagatt gttatccagt tgttcgcgca
    17161 catcaggacg aatacaagag atatgaatat gaaaatggtt ttgcgtacgc ccggtgcggg
    17221 agttgatcgc caaagaaacc gcgcgatcgg gaaccggctg gccgtacttt ttgctcataa
    17281 aatcacgcgc ctgccaggcc aaccaaaaga agttcggcgt tgaaggatcg gtcaacaaag
    17341 gactttcagt accgttaata cgatacgttg gcatcaacag atattgcagt gggccattaa
    17401 gatcttttaa aaccacgtat ccggcattgg gtttgacttc cgcacatggc gaaggatttt
    17461 gattttgctg ctgattgggc aaacattcct caaggacaat cttacgtaat gtatccgact
    17521 cttcaccggt taatttccag taaccaatac cggcagccac aacggcgata actatcatca
    17581 ccaaaaaaag aagacccgct tttttcatct ttttttccct gtacctcaaa gagatgcaag
    17641 ggtaacgcaa aatcgtgaca aataaaaaac ccggtcgcga gaaaccaccg ggtttgataa
    17701 ttatcctggg gaaatcagcg tttgctgatc tgatcgaacg taccgccgtt agcaaaatgc
    17761 tctttttgcg ctttcgtcca gccgccgaac tcttcatcaa tggtgaataa cttcagcttt
    17821 ggaaacgcat tttcgtactt tttcgctact tcagcgtcgc gcggacggta gtagtttttc
    17881 gcggcaattt cctgaccttc tggcgagtag agatatttca ggtaggcttc cgccacctct
    17941 ttggtgcctt ttttctcgac cactttatcg accaccgaca cggttggctc tgcgaggata
    18001 gactcactcg gcgtgacgat ttcgaattta tctttcccca gttcattcgc tgccagcaga
    18061 gcttcgtttt cccaggcgat cagtacatcg ccaatcccgc gctcgacaaa ggtgttagtg
    18121 gagccgcgcg cgccagaatc cagaacttcg acgtttttat acagtgcccg aacaaaatcc
    18181 tgtgcttttg cctgatcgtt gttgttgtga tgcagcgcgt agccccaggc agccaggtag
    18241 ttccagcgtg cgccaccaga gcttttcgga ttaggcgtga tcaccgaaac acccggttta
    18301 atcagatcgt tccagtcatg gatctgcttc ggattgccct tacgcaccag gaaaacaatg
    18361 gtggaagtgt acggtgcgga gttatccggc agacgtttga tccactcttt atcaatccgc
    18421 ccgcgttccg caattgcgtc cacgtcatag gccagagcca gcgtgacaac atcagcttca
    18481 ataccgttga ttaccgacgt cgcttgttta cctgaaccac cgtgtgactg acgcatcacc
    18541 acgttatcac cagtttgctg tttccagtgg gcgctgaatg ccttgttgta ctgttcgtac
    18601 aattcgcgcg ttggatcata tgaaacgtta agaagctgaa tatcctttgc cataacgctg
    18661 gttgccgcca gcaaaaatgt taaccctacg ccccacttgt tcatcgcccg actctcttat
    18721 gttgtgttgt gatgagcaaa gcgtgccaga aggttaacca aacattaaag aataaaaaaa
    18781 gattggctat aacttgcggg tatatgttga gggattaaaa aggcggaaga aatccgcctc
    18841 atattgctga caaagtgcgc tttgtccatg ccggatgcgg cgcgaacgcc ttatccggcc
    18901 tacaaaagtt tgcaaattca ataaattgca gaattcatgt aggcctgata agcgaagcgc
    18961 atcaggcatt tttgcttctg tcatcggttt caggctaaag gaatctgcct ttttccgaaa
    19021 tcattaatac agttttttcg cgcagtccag ccagtcacct ttgaacggac gcttcatgtt
    19081 ttcgatagcg tcgatgatgt cgtggtgaac cagctgttcg ttctggatac ctacacaacg
    19141 accgccgtaa cctgccagca gcagatcgat agcgtaagcg cccatacggg aagccagaat
    19201 acggtcgtaa ggcaccggag aaccaccgcg ctggatgtgg cccagcacag ttgcgcgggt
    19261 ttcacgaccg gtttctttct cgatgaaatg cgccagttcg tcaacatcac acatatgttc
    19321 ggtaatcgcc acgatcgcgt gttttttacc tttcgcgata cccgctttga tttcgtttac
    19381 caggtcttca cggctgaatt caacttccgg aaccacaacg aattcacagc caccggcaat
    19441 ggccgcagcc aacgtcagat cgccacaata acggcccatc acttccacca cggaaatacg
    19501 ctggtgagaa gaagaggtgt cacgcagacg gtcgatcgct tctacaacgg tgctcagcgc
    19561 agtgaagaaa ccgatagtgt agtcagtgcc tttgatgtcg ttgtcgatag tgcccggcag
    19621 accgatgcac gggaagccca tttcggtcag acgcattgca cccatgtagg aaccgtcacc
    19681 gccgataacc accagcgcgt cgataccacg ttttttcagg ttttcgatag ccacggcgcg
    19741 gatgttctcg tcgcggaatt ccgggaaacg cgcagaaccg aggaacgtac cgccacggtt
    19801 gatcatgtca gacacgctgt aacggtctag ctgtaccata cggtcttcat acagacccag
    19861 atagccgtca taaataccca ttacttccag accttctgtc agcgcagaac gaacaacccc
    19921 gcgaattgcg gcgttcatgc ctggcgcatc accgccgctt gtcaacacac cgattttctt
    19981 aatcatgact acctctgaac tttggaatgc aaaatgaaat ctgttgccgg aagtcttctt
    20041 gcacatcgaa gtgatccaac gaatgtgcaa atagtataac aatcacttcc tgctgaattg
    20101 attcaggtca ggccaaatgg cggtatttta tacacaaaat gcgggtctgg ctctctttta
    20161 tactgattat gaaagcatag accgtttacc ctccctgggt acgacggaac aggggtcctg
    20221 atggataatt acatccgatc ccggaaaacg ccgtaaaata gcctgctcta cctgatccgc
    20281 caccatatgt gcctgaacca aaggcagaga gtcttccatt tccaaatgaa tctgaataaa
    20341 gcgggtcggc cctgactgcc gcgtgcgaag atcgtgagcg ccgctaacac ccggccagga
    20401 agtcacgata tcaataattt cttgccgttc ctcatcaggc aatgcgcgat ccagtaatga
    20461 ctgtaccgcc tcatatccca tgcgtaacgc gctatataaa atatagatgc cgattcccaa
    20521 tgcaaacaga gcatcggcgc gatgccagcc gtaccaggac aaccccagcg ccagcagaat
    20581 tgcgccgttc atcataacat cagactggta atgtagcata tcagcccgca ccgcctggct
    20641 ttgcgtccgg cgcaccaccc aacgctgaaa cgagacaagg ataatcgtac aaattagcgc
    20701 cacaattgtc acgataaccc cgacgcctgg atctatcatc ggtgttggag atatcagatg
    20761 ttgaataccc gtcaaaaaca ggaatagtgc cgaaccggag ataaacatac tttgcgccag
    20821 cgccgcgagg gactctgctt taccgtgacc aaacgagtga ttatcgtcgg caggttgcag
    20881 ggaatatcgc accaccagta aattcgtcaa cgacgcgccg atatccacca gcgaatccac
    20941 cagcgcggcg agaatactca ccgacccggt ataccaccat gcaaaaattt taatcagcaa
    21001 tagcaacgaa gccatcgccg tcgcagcaat cgccgcccga ctgaccagcc gtccataaga
    21061 ttgattcata aatactcccg ctatcaactg acgctagtat aacggaagca aatcatctgc
    21121 aatgcattaa gcagcaggca aattgaggat aaaaaaaacc ccacatcatg tgggggaaga
    21181 cagggatggt gtctatggca aggaaaacag ggtttactac tgggaacgtg agttgctact
    21241 actcaatagc ttcaacgatg aacttttttg ccattgcgtc acgtcacgca actgctccat
    21301 tcgttgttga tgtttctcgt ttaaaaccgc ttgctgctcc ggcgttaaca ggcgatacat
    21361 ttggttgcgg acttttgcca tctcaacctg acgagcaatt tgctcattcg ccattttttc
    21421 tgcctgtgcg cgcacagcgt tttcatcaaa attttctgcg gtgacaaggc gatgcattgt
    21481 ctccagttcg ctaacattaa caggaggctg ttcgtgccgg gcctgttgca taagatctcg
    21541 catctgctga cgctgatgtt cggttaaact tatgccgtcg aacatatggc tctgcgtact
    21601 gcgctgcgta ctgcgctgcg taagttcttc acccggatgc cagttatcgc ctgaaccgac
    21661 ttcagcagcg tggcttaatg aactgactgc cagcgttgaa gccatgacgg cagcggtaac
    21721 tatgcgcatc atttgctccc aaaatctttc tgtcgcgatt caacgataga gagtttacga
    21781 ttcaggctgc aaacatgcgt cagggggtgt aaaacaacgt aaagtcatgg attagcgacg
    21841 tctgatgacg taatttctgc ctcggaggta tttaaacaat gaataaaatc ctgttagttg
    21901 atgatgaccg agagctgact tccctattaa aggagctgct cgagatggaa ggcttcaacg
    21961 tgattgttgc ccacgatggg gaacaggcgc ttgatcttct ggacgacagc attgatttac
    22021 ttttgcttga cgtaatgatg ccgaagaaaa atggtatcga cacattaaaa gcacttcgcc
    22081 agacacacca gacgcctgtc attatgttga cggcgcgcgg cagtgaactt gatcgcgttc
    22141 tcggccttga gctgggcgca gatgactatc tcccgaaacc gtttaatgat cgtgagctgg
    22201 tggcacgtat tcgcgcgatc ctgcgccgtt cgcactggag cgagcaacag caaaacaacg
    22261 acaacggttc accgacactg gaagttgatg ccttagtgct gaatccaggc cgtcaggaag
    22321 ccagcttcga cgggcaaacg ctggagttaa ccggtactga gtttaccctg ctctatttgc
    22381 tggcacagca tctgggtcag gtggtttccc gtgaacattt aagccaggaa gtgttgggca
    22441 aacgcctgac gcctttcgac cgcgctattg atatgcacat ttccaacctg cgtcgtaaac
    22501 tgccggatcg taaagatggt cacccgtggt ttaaaacctt gcgtggtcgc ggctatctga
    22561 tggtttctgc ttcatgatag gcagcttaac cgcgcgcatc ttcgccatct tctggctgac
    22621 gctggcgctg gtgttgatgt tggttttgat gttacccaag ctcgattcac gccagatgac
    22681 cgagcttctg gatagcgaac agcgtcaggg gctgatgatt gagcagcatg tcgaagcgga
    22741 gctggcgaac gatccgccca acgatttaat gtggtggcgg cgtctgttcc gggcgattga
    22801 taagtgggca ccgccaggac agcgtttgtt attggtgacc accgaaggcc gcgtgatcgg
    22861 cgctgaacgc agcgaaatgc agatcattcg taactttatt ggtcaggccg ataacgccga
    22921 tcatccgcag aagaaaaagt atggccgcgt ggaactggtc ggtccgttct ccgtgcgtga
    22981 tggcgaagat aattaccaac tttatctgat tcgtccggcc agcagttctc aatccgattt
    23041 cattaactta ctgtttgacc gcccgctatt actgctgatt gtcaccatgt tggtcagtac
    23101 gccgctgctg ttgtggttgg cctggagtct ggcaaaaccg gcgcgtaagc tgaaaaacgc
    23161 tgccgatgaa gttgcccagg gaaacttacg ccagcacccg gaactggaag cggggccaca
    23221 ggaattcctt gccgcaggtg ccagttttaa ccagatggtc accgcgctgg agcgcatgat
    23281 gacctctcag cagcgtctgc tttctgatat ctctcacgag ctgcgcaccc cgctgacgcg
    23341 tctgcaactg ggtacggcat tactgcgccg tcgtagcggt gaaagcaagg aactggagcg
    23401 tattgaaacc gaagcgcaac gtctggacag catgatcaac gatctgttgg tgatgtcacg
    23461 taatcagcaa aaaaacgcgc tggttagcga aaccatcaaa gccaaccagt tgtggagtga
    23521 agtgctggat aacgcggcgt tcgaagccga gcaaatgggc aagtcgttga cagttaactt
    23581 cccgcctggg ccgtggccgc tgtacggcaa tccgaacgcc ctggaaagtg cgctggaaaa
    23641 cattgttcgt aatgctctgc gttattccca tacgaagatt gaagtgggct ttgcggtaga
    23701 taaagacggt atcaccatta cggtggacga cgatggtcct ggcgttagcc cggaagatcg
    23761 cgaacagatt ttccgtccgt tctatcggac cgatgaagca cgcgatcgtg aatctggcgg
    23821 tacaggattg gggctggcga ttgttgaaac cgccattcag cagcatcgtg gctgggtgaa
    23881 ggcagaagac agcccgctgg gcggtttacg gctggtgatt tggttgccgc tgtataagcg
    23941 gagttaaact ccgcatttgt aggcaggata aggcgtttac gccgcatccg gcatttgagc
    24001 aggatgcctg atgcgacgct gatagcgtct tatcaggcct acactccggg ggttattttc
    24061 cccacaaccg gcgggaaaaa tcttcgatct tgccgctcag tcggcgcttt tgcatcgtcc
    24121 gcgtccagct tttcgataac ccggcggcgg agagtaaacg gtgatactga tcgtcatcaa
    24181 acggcatatg ccatgcgatg gcggcagcct cctgcacggt cacatcgctg acacgggaaa
    24241 ccaactccag cggcgcgtcc gcagacactt tccctggcgc tatcacgcta tacaaccacc
    24301 ccaccttacc tgtgttttgc atcaactgcg ctatatcgct gatatcaaaa tggtaattga
    24361 gtttatagca aggcgagcgc ggctggctga cctgaattaa tgcctctccc cagcggaaaa
    24421 tatcgcccat ataaacatta ctttccgtca ggccgtcggt tgagaggttt tcaccaaacg
    24481 caggcgcaac aaacaactcc gcctgttccg gaaattcccg cgcccagtag agataatgct
    24541 cacgaggata atgacacagc gctctgtctg gcccaccatg aacctttttc tccgcctgct
    24601 cgtcaccttc cagccccagc tccgtcagca tcaactcacc atcaacctgg attttggcaa
    24661 ttgcgctggg tttgccttcg ggataagcct gaatcttgcc tgtgtataca tcaaccggat
    24721 atcgcatctg ttccctctcc acgagaaatt tccccattag accatattta ttttatgtca
    24781 ggcgtgctgt tttcgcggta agtatccagg caggaactca atagcaaacc ggacgaacgt
    24841 tagttcatcc ggctgtgggg attaaggaag caggtttatt tcaccgtacc taaaatttcg
    24901 attttcgctg ctctggcttt gactttacgt gaccagatag aggtaagaat tggcaccaga
    24961 atcgaagtca caatgaccgc cgtcgctacc agcgaagttg ctgccggagc catcggttta
    25021 aacgcaggca ccatttctgc aatcagcata ggtgtcgcta ccgcggcccc tgcggaactg
    25081 gaagcggcaa ttccggcagt gccatcgcca ccgccaatca atttatcggc gataatcaac
    25141 ggaataccgg tcacgataat tactgccaca cccaacagga tccccagcaa accagtctgg
    25201 gcaatcacag tcaaatcaat ggtattgccc agcgcgaagg caaagaatgg aatcagcgtt
    25261 tgcaccgctt tgctgaaaaa ttctcgtaat tcagggtcaa ggttccccag ggcaaagccc
    25321 accaggaacg gtaatactgc gccgacgaaa acatgcggtt caaacgaggc aatccctgca
    25381 gtgcccagaa taatcatcgt catgagcggc ccggactcca acgacatcaa cacaaatgcc
    25441 ccagcttctt cttttgtgcc gtactgctgc atgatggaag cgtaaagtcc gccattggtc
    25501 atatccatcg ccgccaccag cgccagcgtt gaaagtccgg caaagaatcc aacttcaaca
    25561 ccatgttccg gaataatgcg cgaggcaatt gccgcaacca cccacgcgac ggcaattttt
    25621 gttaccacca gcgtaccgga tttacgcaat accgttcccg tcgcgcttaa ttttattgac
    25681 gcccccatgc aaaaaaacca caccgccaga atggacaccg taccggtaat catcccgttg
    25741 gtgaatgatc caaaatattt ccccgccccc ggcgagaagg tgtggcacag tgcgccaagg
    25801 aatagcggga cgagcatcat ccccccccgg gattttctca atcgagcgtt ttatctgcat
    25861 ttccatcacc tgtcggcata tttttaaggg ctgatgcgta attcctcaat ggagcatcag
    25921 tgttgatgga aacgaagata gacattcatt taatcaataa aagtgatcaa aaccacatca
    25981 attgaaacgc tgttttattt ttatcggatc attgttttta ttttgaaatt gatcacaaaa
    26041 aaaccaccgc cgttggcgat ggttcatttt ttaagctgat atgcggcgta aacgcctcat
    26101 tgcagcaggc ggcaaatgat tattttttcg ccgcgaaacg tgccgctgct tcatcccagt
    26161 tcaccacgtt ccagaactct ttgatgtagt ccggacggcg gttctggaat ttcaggtagt
    26221 aagcatgttc ccacacatcc aggcccagaa tcgggaagcc ggaagcgcca gaaatagctt
    26281 cacccatcag cggggaatcc tggttagcag tagaaaccac cgccagttta tcgcctttca
    26341 gcaccagcca tgcccagccg gaaccaaagc gggaagctgc cgctttctca aattctgctt
    26401 tgaagttatc aacggagccg aagtcacgtt cgatagccgc tttcaggtca ccctgtaagg
    26461 tggtgccttt tttcagacct ttccagaaca ggctgtggtt agcgtgaccg ccagcgttgt
    26521 tgcgcagtac ggttttcttg tctgctggca gctggtccag tttggtgatc agctcttcaa
    26581 ccggcaggtt ggcaaattct ggcaggcttt ccagcgccgc gttggcgttg ttgacgtagg
    26641 tctgatggtg tttggtgtgg tggatttcca tggtctgctt atcgaagtgc ggttccaggg
    26701 catcgtaagc atacggcagg gatggcaggg tatagctcat attcatctcc agtattgtcg
    26761 ggcggccgat tgttaatgcg cgtaagcagt tggttcatta tagttaatta aatgatattg
    26821 aaaatgatta tcaatgccgt acttttcgta agggtatggt tttgcaggaa aattcccgag
    26881 atgtgaagca aatcacccac ttaatgccgt gattgccagt aaatcgacaa cggcggcaac
    26941 aggcgaaagg ttaatcgaca gcacgatttt tacactcatc tcgtcggaga tgtgacgcga
    27001 cgaaaaatga tgaggataag aagatgagta acgcgattac gatggggata ttttggcatt
    27061 tgatcggcgc ggccagtgca gcctgttttt acgctccgtt caaaaaagta aaaaaatggt
    27121 catgggaaac catgtggtca gttggtggga ttgtttcgtg gattattctg ccgtgggcca
    27181 tcagcgccct gttactgccg aatttctggg cgtattacag ctcgtttagt ctctctacgc
    27241 tgctgcctgt ttttctgttc ggcgctatgt gggggatcgg taatatcaac tacggcctga
    27301 ccatgcgtta tctcggcatg tcgatgggaa ttggcatcgc cattggcatt acgttgattg
    27361 tcggtacgct gatgacgcca attatcaacg gcaatttcga tgttctgctt aataccgaag
    27421 gcggacgcat gacgttgctc ggcgttctgg tggcgctgat tggtgtaggg attgtgactc
    27481 gcgccgggca gttgaaagag cgcaaaatgg gcattaaagc cgaagagttc aacctgaaaa
    27541 aagggctggt gctggcggtg atgtgcggca ttttctctgc cggtatgtct tttgcgatga
    27601 acgccgcaaa accgatgcat gaagccgctg ccgcactggg cgtcgatcca ctgtatgtcg
    27661 ctctgccaag ctatgtcatc atcatgggcg gcggcgcgat catcaacctc ggtttctgct
    27721 tcattcgtct ggcaaaagtg aaggatttgt cgctaaaagc cgacttctcg ctggcaaaac
    27781 cgctgatcat tcacaatgtg ttactctcag cactgggcgg gttgatgtgg tatctgcaat
    27841 tctttttcta tgcctggggc cacgcccgca ttccggcgca gtatgactac atcagttgga
    27901 tgctgcatat gagtttctat gtattgtgcg gcggtatcgt cgggctggtg ctgaaagagt
    27961 ggaacaatgc aggtcgccgt ccggtaacgg tgttgagcct cggttgtgtg gtgattattg
    28021 tcgccgccaa catcgtcggc atcggcatgg cgaattaatc tttctgcgaa ttgagatgac
    28081 gccactggct gggcgtcatc ccggtttccc gggtaaacac caccgaaaaa tagttactat
    28141 cttcaaagcc acattcggtc gaaatatcac tgattaacag gcggctatgc tggagaagat
    28201 attgcgcatg acacactctg acctgccgca gatattgatt gatggtcatt ccagtctgct
    28261 ggcgaaattg ctgacgcaaa acgcgctcac tgcacgatgc ctcatcacaa aatttatcca
    28321 gcgcaaaggg acttttcagg ctagccgcca gccgggtaat cagcttatcc agcaacgttt
    28381 cgctggatgt tggcggcaac gaatcactgg tgtaacgatg gcgattcagc aacatcacca
    28441 actgcccgaa cagcaactca gccatttcgt tagcaaacga cacatgctga ctactttcat
    28501 gctcaagctg accgataacc tgccgcgcct gcgccatccc cacgctacct aagcgccagt
    28561 gtggttgccc tgcgctggcg ctaaatcccg gaatcgctcc ctgccagtca agattcagct
    28621 tcagccgctc cgggcaataa ataatattct gcaaaaccag atcgttaacg gaagcgtagg
    28681 agtgtttatc gtcagcatga atgtaaaaga gatcgccacg ggtaatgcga taagggcgat
    28741 cgttgagtac atgcagacca ttaccgcgcc agacaatcac cagctcacaa aaatcatgtg
    28801 tatgttcggc aaaaacatct tgcggataac ggtcagccac agcgactgcc tgctggtcgc
    28861 tggcaaaaaa atcatctttg agaagtttta actgatgcgc caccgtggct acctcggcca
    28921 gagaacgaag ttgattattc gcaatatggc gtacaaatac gttgagaaga ttcgcgttat
    28981 tgcagaaagc catcccgtcc ctggcgaata tcacgcggtg accagttaaa ctctcggcga
    29041 aaaagcgtcg aaaagtggtt actgtcgctg aatccgcagc gataggcgat gtcagtaacg
    29101 ctggcctcgc tgtgacgtag cagatgtcgg gccttcatca gtcgcaggcg gttcaggtaa
    29161 cgctgaggcg tcagtcccgt ttgctgctta agctgccgat gtagcgtacg cagtgaaaga
    29221 gaaaattgat ccgccacggc atcccaattc acctcatcgg caaaatggtc ctccagccag
    29281 gccagaagca agttgagacg tgatgcgctg ttttccaggt tctcctgcaa actgctttta
    29341 cgcagcaaga gcagtaattg cataaacaag atctcgcgac tggcggtcga gggtaaatca
    29401 ttttcccctt cctgctgttc catctgtgca accagctgtc gcacctgctg caatacgctg
    29461 tggttaacgc gccagtgaga cggatactgc ccatccagtt cttgtggcag caactgattc
    29521 agcccggcga gaaactgaaa tcgatccggc gagcgataca gcacattggt cagacacaga
    29581 ttatcggtat gttcatacag atgccgatca tgatcgcgta cgaaacagac cgtgccaccg
    29641 gtgatggtat agggctgccc attaaacaca tgaatacccg tgccatgttc gacaatcaca
    29701 atttcatgaa aatcatgatg atgttcagga aaatccgcct gcgggagccg gggttctatc
    29761 gccacggacg cgttaccaga cggaaaaaaa tccacactat gtaatacggt catactggcc
    29821 tcctgatgtc gtcaacacgg cgaaatagta atcacgaggt caggttctta ccttaaattt
    29881 tcgacggaaa accacgtaaa aaacgtcgat ttttcaagat acagcgtgaa ttttcaggaa
    29941 atgcggtgag catcacatca ccacaatgaa gcaaattgtg aacatcatca cgttcatctt
    30001 tccctggttg ccaatggccc attttcctgt cagtaacgag aaggtcacga attcaggcgc
    30061 tttttagact ggtcgtaatg aaattcagca ggatcacatt atgacctttc gcaattgtgt
    30121 cgccgtcgat ctcggcgcat ccagtgggcg cgtgatgctg gcgcgttacg agcgtgaatg
    30181 ccgcagcctg acgctgcgcg aaatccatcg ttttaacaat ggcctgcata gccagaacgg
    30241 ttatgtcacc tggaatgtgg atagcctgga aagtgccatt cgccttggat taaacaaggt
    30301 gtgcgaggaa gggattcgta tcgatagcat tgggattgat acctggggcg tggactttgt
    30361 gctgctcgac caacagggtc agcgtgtggg cctgcccgtt gcttatcgcg atagccgctc
    30421 caatggccta atggcgcagg cacagcaaca actcggcaaa cgcgatattt atcaacgtag
    30481 cggcatccag tttctgccct tcaatacgct ttatcaactg cgtgcgctga cggagcaaca
    30541 acctgaactt attccacaca ttgctcacgc tctgctgatg ccggattact tcagctatcg
    30601 cctgaccggc aagatgaact gggaatatac caatgccacc accacacaac tggtcaatat
    30661 caatagcgac gactgggacg agtcgctact ggcgtggagc ggggccaaca aagcctggtt
    30721 tggtcgcccg acgcatccgg gtaatgtcat tgggcactgg atttgcccgc agggtaatga
    30781 gattccggtg gtcgccgttg ccagccatga taccgccagc gcggttatcg cctcgccgtt
    30841 aaacggttca cgcgctgctt atctctcttc tggcacctgg tcattgatgg gcttcgaaag
    30901 ccagacgcca tttaccaatg acacggcgct ggcagccaac ataaccaatg aaggcggggc
    30961 ggaaggtcgc tatcgggtgc tgaaaaatat tatgggctta tggctgcttc agcgagtgct
    31021 tcaggagcgg caaatcaacg atctcccggc gcttatcgcc gcgacacagg cacttccggc
    31081 ctgccgcttc atcatcaatc ccaatgacga tcgctttatt aatcctgagg cgatgtgcag
    31141 cgaaattcag gctgcgtgtc gggaaacggc gcaaccgatc ccggaaagtg atgctgaact
    31201 ggcgcagcta cgcggtgaag atttctcgca actgcatatt gtcggcggcg gctgccagaa
    31261 cacgctgctc aaccagctat gtgccgatgc ctgcggtatt cgggtgatcg ccgggcctgt
    31321 tgaagcctcg acgctcggca atatcggcat ccagttaatg acgctggatg aactcaacaa
    31381 tgtggatgat ttccgtcagg tcgtcagcac caccgcgaat ctgaccacct ttacccctaa
    31441 tcctgacagt gaaattgccc actatgtggc gcagcttcac tctacacgac agacaaagga
    31501 gctttgcgca tgaccactca actggaacag gcctgggagc tggcgaaaca gcgtttcgcg
    31561 gcggtgggga ttgatgtcga ggaggcgctg cgccaacttg atcgtttacc cgtttcaatg
    31621 cactgctggc agggcgatga tgtttccggt tttgaaaacc cggaaggttc gctgaccggg
    31681 gggattcagg ccacaggcaa ttatccgggc aaagcgcgta atgccagtga gctacgtgcc
    31741 gatctggaac aggctatgcg gctgattccg gggccgaaac ggcttaattt acatgccatc
    31801 tatctggaat cagatacgcc agtctcgcgc gaccagatca aaccagagca cttcaaaaac
    31861 tggggtgaat gggcgaaagc caatcagctc ggtctggatt ttaacccctc ctgcttttcg
    31921 catccgctaa gcgccgatgg ctttacgctc tcgcatcccg acgacagcat tcgccagttc
    31981 tggattgatc actgcaaagc cagccgtcgc gtttcggcct attttggcga gcaactcggc
    32041 acaccatcgg tgatgaacat ctggatcccg gatggtatga aagatatcac cgttgaccgt
    32101 ctcgccccgc gtcagcgtct gctggcagca ctggatgagg tgatcagcaa gaagctaaac
    32161 cctgcgcacc atatcgacgc cgttgagagc aaattgtttg gcattggcgc agagagctac
    32221 acggttggct ccaatgagtt ttacatgggg tatgccacca gccgccagac tgcgctgtgc
    32281 ctagacgccg ggcacttcca cccgactgaa gtgatttccg acaagatttc cgccgccatg
    32341 ctgtatgtgc cgcagttgct gctgcacgtc agccgtccgg ttcgctggga ctgcgatcac
    32401 gtagtgctgc tggatgatga aacccaggca attgccagtg agattgtgcg tcacgatctg
    32461 tttgaccggg tgcatatcgg ccttgacttc ttcgatgcct ctatcaaccg cattgccgcg
    32521 tgggtcattg gtacacgcaa tatgaaaaaa gccctgctgc gtgcgttgct ggaacctacc
    32581 gctgagctgc gcaagctgga agcggcgggc gattacactg cgcgtctggc actgctggaa
    32641 gagcagaaat cgttgccgtg gcaggcggtc tgggaaatgt attgccaacg tcacgatacg
    32701 ccagcaggta gcgaatggct ggagagcgtg cgggcttatg aaaaagaaat tttgagccag
    32761 cgtgggtaaa cactgccgga tgcggcgcga gcgccttatc cggcctacgg gtcggcaa
//
LOCUS       DADKRT010000025        32486 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.025, whole genome shotgun sequence.
ACCESSION   DADKRT010000025 DADKRT010000000
VERSION     DADKRT010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 32486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32486
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.025"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            196..990
                     /gene="panB"
                     /locus_tag="JQ356_001000"
     CDS             196..990
                     /gene="panB"
                     /locus_tag="JQ356_001000"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HAY4621167.1"
                     /translation="MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
                     DSLGMTVQGHDSTLPVTVADIAYHTASVRRGAPNCLLLADLPFMAYATPEQAFENAAT
                     VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
                     DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
     gene            1002..1853
                     /gene="panC"
                     /locus_tag="JQ356_001001"
     CDS             1002..1853
                     /gene="panC"
                     /locus_tag="JQ356_001001"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HAY4621168.1"
                     /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
                     TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
                     KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
                     ERDLDEIIAIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
                     NKIVELA"
     gene            complement(2145..3041)
                     /locus_tag="JQ356_001002"
     CDS             complement(2145..3041)
                     /locus_tag="JQ356_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY4621169.1"
                     /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
                     HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQGKPDKKMAFRMMRYSIAAM
                     HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
                     TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR
                     GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKG
                     MSREDVAEMTNLSLAEIDRLIN"
     gene            3315..3695
                     /gene="panD"
                     /locus_tag="JQ356_001003"
     CDS             3315..3695
                     /gene="panD"
                     /locus_tag="JQ356_001003"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HAY4621170.1"
                     /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
                     PNVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(3699..4899)
                     /locus_tag="JQ356_001004"
                     /pseudo
     CDS             complement(3699..4899)
                     /locus_tag="JQ356_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000899461.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
     gene            complement(4994..5434)
                     /locus_tag="JQ356_001005"
     CDS             complement(4994..5434)
                     /locus_tag="JQ356_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HAY4621171.1"
                     /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
                     SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA
                     CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY"
     gene            complement(5539..6309)
                     /locus_tag="JQ356_001006"
     CDS             complement(5539..6309)
                     /locus_tag="JQ356_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4621172.1"
                     /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
                     HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
                     GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGINDVPLATTFGVLVVFIVVFYLICWSLIQRGRGLRS"
     gene            complement(6306..7232)
                     /locus_tag="JQ356_001007"
     CDS             complement(6306..7232)
                     /locus_tag="JQ356_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY4621173.1"
                     /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKALLAKLKLETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
                     EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
     gene            7341..8003
                     /gene="can"
                     /locus_tag="JQ356_001008"
     CDS             7341..8003
                     /gene="can"
                     /locus_tag="JQ356_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HAY4621174.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPHFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
                     GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
                     STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
                     HK"
     gene            complement(8044..8580)
                     /gene="hpt"
                     /locus_tag="JQ356_001009"
     CDS             complement(8044..8580)
                     /gene="hpt"
                     /locus_tag="JQ356_001009"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HAY4621175.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG
                     SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY
                     AQRYRHLPYIGKVILLDE"
     gene            8786..11176
                     /locus_tag="JQ356_001010"
     CDS             8786..11176
                     /locus_tag="JQ356_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HAY4621176.1"
                     /translation="MAINNTGSRRLLVTLTVLFAALCGLYLLIGGGWLVAIGGSWYYP
                     IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWRRLVIPASGAVAALVVALLISGSILTWAGFNDPQEINGTLSADATPTEAI
                     SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV
                     TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPKLKTNESFQHVTCRGVSYHEAKAE
                     TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE
                     PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD
                     EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT
                     GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV
                     VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPKKDLSGADMWGATMFDQLVCRVMFHQM
                     RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN
                     PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV
                     VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN
                     GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK"
     gene            complement(11223..12773)
                     /gene="cueO"
                     /locus_tag="JQ356_001011"
     CDS             complement(11223..12773)
                     /gene="cueO"
                     /locus_tag="JQ356_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HAY4621177.1"
                     /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
                     RNRIQLTIGAGQSTFGEKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW
                     HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
                     VIEDDEILKLMLPKQWGIDDVPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNG
                     AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL
                     MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
                     SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
                     MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
                     QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT
                     GMMLGFTV"
     gene            12939..13286
                     /locus_tag="JQ356_001012"
     CDS             12939..13286
                     /locus_tag="JQ356_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HAY4621178.1"
                     /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND
                     CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            13392..14258
                     /gene="speE"
                     /locus_tag="JQ356_001013"
     CDS             13392..14258
                     /gene="speE"
                     /locus_tag="JQ356_001013"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HAY4621179.1"
                     /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPSGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
                     YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP
                     QYLQDALASQPS"
     gene            14274..15068
                     /gene="speD"
                     /locus_tag="JQ356_001014"
     CDS             14274..15068
                     /gene="speD"
                     /locus_tag="JQ356_001014"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HAY4621180.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
     gene            complement(15105..15467)
                     /locus_tag="JQ356_001015"
     CDS             complement(15105..15467)
                     /locus_tag="JQ356_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414661.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HAY4621181.1"
                     /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
                     AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG
                     VEDFLQVVAAYRNFVQQK"
     gene            complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="JQ356_001016"
     CDS             complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="JQ356_001016"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HAY4621182.1"
                     /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKKPPAGEEEF
                     LLDLLTNRVPPGVDEAAYVKAGLLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFMNRP
                     ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG
                     PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
                     DGVIFQTAV"
     gene            18594..20447
                     /locus_tag="JQ356_001017"
     CDS             18594..20447
                     /locus_tag="JQ356_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HAY4621183.1"
                     /translation="MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAAVETQSTQ
                     LAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY
                     PANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL
                     GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSN
                     TVLTASPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP
                     FIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHN
                     GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYHNGVPYHDQDMAKRFHQTDVNGGMSA
                     TQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFS
                     RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQRREAARERIQPASPEQRQ
                     AVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA
                     SPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER"
     gene            complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="JQ356_001018"
     CDS             complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="JQ356_001018"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HAY4621184.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNPKAKKK"
     gene            complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="JQ356_001019"
     CDS             complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="JQ356_001019"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HAY4621185.1"
                     /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE
                     VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
                     IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR
                     RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV
                     DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK
                     RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV
                     PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN
                     APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD
                     IRRLVM"
     gene            complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="JQ356_001020"
     CDS             complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="JQ356_001020"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HAY4621186.1"
                     /translation="MSERFPNDVDPIETCDWLQAIESVIREEGVERAQYLIDQLLAEA
                     RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
                     EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
                     NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHSI
                     KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
                     YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
     gene            complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="JQ356_001021"
     CDS             complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="JQ356_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HAY4621187.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
                     TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
     gene            28303..29676
                     /gene="aroP"
                     /locus_tag="JQ356_001022"
     CDS             28303..29676
                     /gene="aroP"
                     /locus_tag="JQ356_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter AroP"
                     /protein_id="HAY4621188.1"
                     /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
                     VIAVVAMIIFGGWLLFSGNSGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
                     HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
                     NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
                     VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
                     AKAVKAH"
     gene            complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="JQ356_001023"
     CDS             complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="JQ356_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HAY4621189.1"
                     /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
                     GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
                     SHARVTMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGIWGPV
                     TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
                     PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL
                     LTIYGALV"
     gene            complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="JQ356_001024"
     CDS             complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="JQ356_001024"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HAY4621190.1"
                     /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPD
                     RKTDPGPAFDWARFRALVSKETT"
     gene            31209..32102
                     /gene="nadC"
                     /locus_tag="JQ356_001025"
     CDS             31209..32102
                     /gene="nadC"
                     /locus_tag="JQ356_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HAY4621191.1"
                     /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
                     ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
                     PLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR
                     SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
                     LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
                     FISVGALTKHVQALDLSMRFR"
     gene            32305..>32486
                     /locus_tag="JQ356_001026"
     CDS             32305..>32486
                     /locus_tag="JQ356_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY4621192.1"
                     /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
                     TFVPYRTAVELCALEHG"
BASE COUNT         7832 a         8834 c         8001 g         7819 t
ORIGIN      
        1 ccacgctaca acaggatgga actataccaa tagaagctgg tgagtttaaa gccaccagta
       61 ctttccaggt aacctaccct taataagtcc accgcaccgc catcatctgg cggtgcggta
      121 attgataaat cattgccccc accaatgtga ctgataaaat gccaggcaac acgacatcat
      181 ttatcaggac acgttatgaa accgaccacc attgcttcac ttcagaaatg taagcaggat
      241 aaaaagcgtt tcgcgaccat caccgcttac gactacagct tcgcgaaact atttgctgat
      301 gaaggactta acgtcatgct ggtaggcgac tcgctgggca tgacggttca gggtcacgac
      361 tccaccctgc cggtgaccgt tgccgatatc gcctaccaca ctgcctccgt acgtcgtggt
      421 gcgccaaact gcctgctgtt ggctgacctg ccgtttatgg cgtatgccac gccggaacaa
      481 gcctttgaaa acgccgcaac ggttatgcgt gccggtgcca atatggtcaa aattgagggc
      541 ggtgagtggc tggtcgaaac cgtaaaaatg ctgaccgaac gtgccgttcc tgtatgtggt
      601 cacttaggtt taaccccaca gtcagtgaat attttcggtg gctacaaagt tcaggggcgc
      661 ggcgatgaag cgggcgatca actgctcagc gatgcattag ccttagaagc cgctggggca
      721 cagctgctgg tgctggaatg cgtgccggtt gaactggcaa aacgtattac cgaagcactg
      781 gcgatcccgg ttattggcat tggcgcaggc aacgtcactg acgggcagat cctcgtgatg
      841 cacgacgcct tcggcattac cggcggtcac attcctaaat tcgctaaaaa tttcctcgcc
      901 gaaacgggcg acatccgcgc ggctgtgcgg cagtatatgg ctgaagtgga gtccggcgtt
      961 tatccgggcg aagaacacag tttccattaa ggagtcacgt tgtgttaatt atcgaaaccc
     1021 tgccgctgct gcgtcagcaa attcgccgcc tgcgtatgga aggcaagcgc gtggcgctgg
     1081 tgcctactat gggtaatctg cacgatggcc atatgaagct ggtcgacgaa gccaaagccc
     1141 gcgccgatgt ggtcgtcgtc agtattttcg ttaacccgat gcagttcgac cgcccggaag
     1201 atctggcacg ttatccacgg accttgcagg aggactgcga gaagctaaac aaacgtaaag
     1261 tggatttagt tttcgcccct tcggtaaaag agatctaccc gaacggtact gaaacccata
     1321 cttacgttga cgttcccggg ctttcgacca tgctggaagg cgcgagccgt ccggggcatt
     1381 ttcgcggcgt ttcgactatc gtcagcaagc tgtttaacct ggtccagccg gacatcgcct
     1441 gcttcggtga aaaggacttt cagcaactgg cgctaatccg caaaatggtt gccgatatgg
     1501 gcttcgatat tgaaattgtc ggcgtcccga ttatgcgcgc caaagatggc cttgcgctca
     1561 gttcccgtaa tggttatctg acggcggaac aacgcaaaat tgcgcccggt ctgtacaaag
     1621 ttttaagttc aattgccgac aaattgcagg ctggcgagcg ggatcttgat gaaattattg
     1681 ccattgcagg gcaagaactg aatgaaaaag gcttccgcgc cgatgatatt cagattcgcg
     1741 atgccgacac gttgctggaa gtctctgaaa ccagcaaacg agctgtaatt ctggtagccg
     1801 cctggcttgg cgatgcccgc ctgatcgaca acaaaatcgt cgaactggcg taatgctttt
     1861 actctaaata attcaagttg caggaaggcg gcaagcgagt gacaaattcg tcaggaacga
     1921 atttgcccag ccgcaggctg gccttcggtg agagacatgg atgtctctca ttaatcccca
     1981 ggagcttaca taagtaagtg actggggtta gcgaacgcag acacagcaca tgcaatttaa
     2041 agtatgacga gtataactgg cgctacggct gatggcgcca attattaatt tgccccacgt
     2101 catggcgatg gcgtctgtaa gcaattattc ataacgcaga caacttagtt aatcagccta
     2161 tcaatctcag caagagataa atttgtcatc tctgcaacgt cttcccgaga catcccttta
     2221 ctcagaaaac gctgggcgaa ttcttgcctt tcctcctgtc ttccctgctg aatccccttc
     2281 tcaatccctt tctcttcaaa ccactgcgcc agcgtcatca tagactcccc tcccgtttcc
     2341 ctgtctctca gcacaccata aaacaaatcc gcttgttcag tatgaccgcg ttgcagcata
     2401 tagttttgca tggcaactaa ctgacttccg ctagtgtacc cttcgtcaat cagcgtgacc
     2461 agttgctcca gcaataacat taagtcgcgc tggcgaatat gtttttgcag tagttcgaga
     2521 atcgcaatcc gccgatgttg catgatttcg tcatccggtg tgatggtgat atccaccagc
     2581 gggaaaggac tgttatagac gcgtcgtgcc agctccggcg agtaaaatat atcaaaccag
     2641 cacattgaga gcggataagg tgtggcctcg ccctgataaa acagtatcgg caccaccagc
     2701 ggcagcttat cgtgatccgc ctccagatgc cggtgcatgg cagcaataga ataacgcatc
     2761 atgcgaaagg ccattttctt atccggcttg ccttggtgtt caatcacaac atgcagataa
     2821 ccgggattgc cctgcatttg cacggaatag agcacgtccg tgctgtgtcc tttcaggctc
     2881 tcttcaatga aactccccga ctctaaatga agcgtgttga ggtcacaaag ttctcgtaat
     2941 tccactggca aatgtatctc cagaaagtcg cgagccgtct ccgcgtgcat taaaaattgt
     3001 ttaaacactg catcatgcgg tgtggtactc ggtgcatcca tcttccctgc cttccgtgtt
     3061 gtcttgcgtg aaggcagtat ccagtcaagg cgtgccatcg tcagccacct ctttagtgtt
     3121 taccgagcag cgttcagaga aatttcaatt ggttacagcc gttacatggc acgcttcggc
     3181 acggtacgca aactgctgat gtaaatgccg tcagatgagt agacactaaa caaaaatcgg
     3241 gcaatactgc gtgagaattt cctcaaagca ggcatcgcct gcttcgttaa cgacagggta
     3301 gaaaggtaga agttatgatt cgcacgatgc tgcagggcaa actccaccgc gtgaaagtga
     3361 ctcatgcgga cctgcactat gaaggttctt gcgccattga ccaggatttt cttgacgcag
     3421 ccggtattct cgaaaacgaa gccattgata tctggaatgt caccaacggc aagcgtttct
     3481 ccacttatgc catcgcggca gaacgcggtt cgagaattat ttctgttaac ggtgcggcgg
     3541 cccactgcgc cagtgtcggc gatattgtca tcatcgccag cttcgttacc atgccagatg
     3601 aagaagctcg cacctggcga cccaacgtcg cctattttga aggcgacaat gaaatgaaac
     3661 gtaccgcgaa agcgattccg gtacaggttg cttgattgtt atccctgcgg ctggttactc
     3721 accagccgcg acatcgtctc cagcgaatcc gttcttaaga tataaagtcg ttttagtaac
     3781 aacggattat cccccggttt tactttgcct ttcatggttg tcaccgccag gtgaaatccg
     3841 gcatcgtttg ctgccttcac ggctttgtca ttaaatccgc caaacggata cgaaagatac
     3901 cagacatgcg gattaaattg cgccagagcg cggcgtgaac gtgcaaaatc aaacagaata
     3961 ttgtgttcac tacggctcgg taatatgggg cggcgataac catccacccg atgcaaaaaa
     4021 tgggtatgtg actggaaatc aaaaacatcg cgaatttcgt taagttcaga aacgctcata
     4081 aattgcagcg attttgggtc ccacttctgc gggtgacgtt tgatgcgcga ggtaacaata
     4141 aacgccgtcg ccttcatgcc atattgtttc aacacgggat acgcatagcg gctcaccgat
     4201 ttgaggccat catcaaaggt aatcaccacc gctcgcgcag ggagattgat cttattcttc
     4261 acgtaacctt ccagctgcac catgctcagt gtcgcgtatc ccctgtcgcg cagccaggcc
     4321 atctggttat tgaaagcgcg tactgaggtg gtcgtcgaag tatggcgaaa acgggtgttt
     4381 tcttcatcgc gcagaatatg gtgataggtt agcaccggca ggccattatc gggttgggca
     4441 tccagcgcgc tgatataggc cagtcgatcg ccaatacgga tctgatacca ggtttgattt
     4501 aacctgtctt tcagtttatg caaaatcggg tagcgcaaat tgtccgccag taccccataa
     4561 tggcgcactg cccgcactcg gcgcgttata gaccggcgta tctttccagg taattaagtt
     4621 ctgattactc agcggcttgt tgaggtcacc caaaccgtct tcaacttttt gtcgcccctg
     4681 aactggctcg agatgccctt tatcgataaa ccctttacca aagccaaaat taaatgcgta
     4741 ataacttgcg gcagtgggct ccacggcaat gatttgcccg gcccgaatat tccccacggt
     4801 caccatcttg tcgccaattt gcgcccagat cgcagcattt tcgatggttt gcatataacg
     4861 ggcaggtaac gcggcactaa cgcttgcggt aaacagcatc agcaggatga ataacagctt
     4921 gtttatacat gaaaaaataa ccgagggtga aacaacgctt gtattgtagc aaaagcgcca
     4981 tcagaatcgc gggttaatac tcatacaaat tatgtttgag gacaaaaggc ggattttttt
     5041 gttgttggtg ccaaagacta ctcacctccg gcgcacccag ttcgacaata cgctcgcgaa
     5101 actctgaact ggtcatggtt tcacggcaag ccatcatctg ttcaattaac ggtaacgtga
     5161 caccagaaat cacttcacaa cgggagtgtt tatggcttaa taatgaagcc acgcggtacg
     5221 gtggcgctcc ggctatatcg gttaagaaga tgacaccctc accagagtcc gcttcatgca
     5281 gagcatcgca catcatgcgg ctgagcatat tagagcttaa tccgcgccag aaattcacgg
     5341 cccggcactg aagaagtgcc ccatgttttt tctccagcgc atccagtatc tcttgcgccc
     5401 ggtcatcgtg acaggtaatt acccaaccta acatcgcctt cctccttagc cgaaaatcag
     5461 tctatcctga ccattgttga taaagggtga tagccgtcaa aactcctctc ccccgaatcc
     5521 agaggagagg aaatagcctt agctacgcaa accacgtcca cgttggatca gcgaccaaca
     5581 gatcaaataa aacaccacaa taaagaccac cagtacgcca aaggtagtgg ccagcggcac
     5641 atcatttata ccgaggaagc cgtagcggaa accactgatc atataaacga ttgggttcag
     5701 gtgcgacagc ccttgccaga acggcggcaa caaagtcagg gagtaaaaca ccccgcccaa
     5761 atacgtgagt ggcgttaaca caaaggttgg caccaggctg atgtcatcga acgttttggc
     5821 aaacacgccg ttcagcaaac ccgcaaggga gaatagcacc gccgtgagca ccagggttaa
     5881 ggcaacgaat acccacgaat gcacctgaaa cggcacaaaa aacagtgaaa ttgccgtcac
     5941 cagaatgcca acaaacagac cacgcgccac gccaccgccg acatatccgg caataatgac
     6001 gtgagtcgga accggcgcta ccagcagctc ttcaatatta cgctggaact tggcaccaaa
     6061 aaatgatgac gcgacgttag cgtaggcatt ggtgatcacc gacatcatga tcagccccgg
     6121 tacgatgaac tgcatatagc tgaagccatg catatcgcca atacgcgaac ctatcaggtt
     6181 accgaagata ataaagtaaa gggtcatggt gatgactggc ggcaccagcg tctgcaccca
     6241 gatacgcata aagcgatgga tctctttcgc ccagatgctt tttagcgcca cccagtaaag
     6301 atgcatcatg cgcgatctcc ttgtttttca ttaaccagtg aaacaaacag ctcttccaga
     6361 cggttagctt tgttacgcat acttaatacc tgaatgccct gctcacttaa ctgcgtaaat
     6421 acgctgttga tcccctgctc acgcagcact tcaacttcca gcgtcgcggt atcgaccagt
     6481 cgatactgat agccatcgag cttcggtaac gggcttttcg gtgcgagatc gagaataaag
     6541 gtttccaatt tcagcttcgc cagcagcgcc ttcatcgagg tattttccac cagctcaccg
     6601 tgttgaataa tgccgatatt gcggcacagc atttctgctt cttccaggta gtgtgtagtg
     6661 agaatgatgg tggtgccttt gtcgtttaaa tccttcaaaa agccccacat tgagcggcga
     6721 agttcaatat ccacgcctgc ggtcggttcg tcgagaatca gtagtttagg ttcatgcatt
     6781 aacgcacggg caatcattaa acggcgcttc atcccgccag ataacatacg cgcacgttcg
     6841 ttgcgttttc cccataaatc gagttgtttg agatattttt cgctgcggat gtacgcttct
     6901 ttgcgctcca cgccgtagta ccctgcctga ttcaccacaa tttgctgcac ggtttcaaac
     6961 gggttgaagt taaattcctg cggcaccagt cccaactgac gtttagcgtt cacgacatcc
     7021 ttctcgagat cgtaaccaaa tacgctgacc cgcccggagg ttttatttac cagagagctg
     7081 ataataccga tagtggtcga tttcccggcc ccgttcggcc cgagaagcgc ataaaaatca
     7141 cccgcttcga cctgcaaatc tattccacga agcgcctgaa cgccgcctgg ataggttttt
     7201 ttaagctgtt gaagttccag tgcaatggtc ataaattttt acttacctta cgttcttaca
     7261 ctttatctgt ggtttaaatc gtcccggagt tgccctatat tagccaaacg taattatttg
     7321 gttacaggtc gttaacctcc atgaaagaca tagatacact catcagcaac aatgcactat
     7381 ggtcaaaaat gctggtggaa gaggatcccg ggttttttga gaaactggca caagcgcaaa
     7441 aaccgcactt tctatggatt ggatgttccg acagtcgcgt tcctgcagaa cgtttaaccg
     7501 gtcttgagcc gggcgaactc tttgttcacc gtaatgttgc taacctggtc attcacaccg
     7561 acctgaactg cctttccgtg gttcagtatg cagtggatgt actagaagtt gaacacatta
     7621 ttatctgtgg ccactacggt tgcggcggcg tacaagccgc agttgaaaac ccggaactgg
     7681 ggcttatcaa caactggctg ctgcatatcc gcgatatctg gttcaaacat agctcattgc
     7741 tcggcgaaat gccgcaagag cgccgtctgg ataccttgtg tgaactgaac gtcatggaac
     7801 aggtgtataa cctaggccac tccaccatta tgcaatcagc gtggaaacgc gggcagaaag
     7861 ttaccattca cggctgggcc tatggcattc acgacggctt gctgcgtgat ctggatgtta
     7921 ctgccaccaa ccgcgaaacc cttgagcaac gttaccgtca cgggatttcc aacctcaagc
     7981 tgaaacacgc caaccacaaa taaaaatgcc atgccggatg caacacatcc ggcaacttca
     8041 cacttactcg tccagcagaa tcactttgcc gatatacggc agatgacggt aacgctgtgc
     8101 gtaatcaatg ccgtaaccca ccacaaactc atccgggatc gagaaaccga taaattctac
     8161 cgggacgttc acttcacgac gggacggttt atccagcagc gtacaaatcg ccagcgactt
     8221 cggttcgcgc aggcttaaga tctcacgcac tttcgacagt gtattccccg agtcgatgat
     8281 atcttcaaca atcagcacgt ccttgccacg gatatcttca tccagatctt tgaggatttt
     8341 cacatcacgg gtggtggaca tgccgctacc gtagctggag gcggtcataa agtcgacttc
     8401 atgagatacc tgaacttcac ggcacaggtc cgccataaac ataaatgagc cacgcagcag
     8461 acccaccagc accatatcgc tgccgctgtc tttgtaacgc tcagtaatct gacgacccag
     8521 ttcggcgata cgcgctttaa tctccgcttc ggggatcatt acttctacag tatgtttcat
     8581 atctctaacc atatgattta aaaacaaatc acttcgcacg ggcaggtttt ggcaccgcaa
     8641 caaagcgcaa gacacgcagt ataccagtaa aactattcat tcgcggaatc tgttaataaa
     8701 gctcgaattg tgatgacgat cacacatgtt aaaacctata attaattgct actaaaatat
     8761 taatgaattg aaatggtgtc tctttatggc aattaacaat acaggctcgc gacgattact
     8821 cgtcacgcta acagtccttt ttgcagcgct ttgcgggctg tatctactca ttggcggagg
     8881 ctggctggtc gcgattggcg gctcctggta ctaccctatc gctggccttg tgatgctcgg
     8941 cgtcgcctgg atgctgtggc gcagtaaacg tgccgcgctt tggctatacg ccgccctgct
     9001 gctcggcacc atgatttggg gcgtctggga agttggtttc gacttctggg cgctgactcc
     9061 gcgcagcgat attctggtct tcttcggcat ctggctgatc ctgccgtttg tctggcgtcg
     9121 cctggtcatt cctgccagcg gcgcagttgc cgcactggtg gtggcactgc tgattagcgg
     9181 tagtatcctg acctgggccg gatttaacga tccgcaggaa atcaacggca ccttaagcgc
     9241 cgatgccaca cctacggaag ctatctcacc cgttgccgat caggactggc ctgcctatgg
     9301 tcgcaatcag gaaggtcaac gcttttcacc tctgaaacaa attaacgccg ataacgtcca
     9361 taatctgaaa gaagcctggg tgttccgtac tggcgatgtg aagcagccga acgatccggg
     9421 cgaaatcacc aatgaagtga cgccgattaa agtgggcgac accctttacc tgtgtaccgc
     9481 tcaccagcgc ctgtttgcgc tcgatgccgc cagcggcaaa gagaaatggc attacgatcc
     9541 taagctgaaa actaacgagt ctttccagca cgtaacctgc cgtggcgtct cttatcatga
     9601 agccaaagca gaaacggctt cgccggaagt gatggcggat tgcccgcgtc gtatcattct
     9661 tccggtcaat gatggtcgac tgattgcgat taacgctgaa aacggcaaac tgtgcgaaac
     9721 cttcgccaat aaaggcgtgc tcaatctgca aagcaatatg ccagacacca aaccgggtct
     9781 gtatgaaccg acttcgccac cgattatcac cgataaaacc atcgtgatgg caggttcagt
     9841 taccgataac ttctcaaccc gcgaaacgtc tggcgtgatc cgtggttttg atgtcaacac
     9901 cggggagctg ctgtgggctt ttgatcccgg cgcgaaagat ccgaacgcaa tcccgtctga
     9961 cgaacacacc tttaccttta actcgccaaa ctcctgggca ccagcggcct atgacgcgaa
    10021 gctggatctg gtctatctgc cgatgggcgt gaccacgccg gatatctggg gcggtaaccg
    10081 cacaccggaa caggaacgtt atgccagctc gattctggcg ctgaatgcca ctaccgggaa
    10141 actggcgtgg agctaccaga ccgttcacca cgacctgtgg gacatggatc ttccggcaca
    10201 gccgacgctg gcggacatca ccgttaatgg tcagaaagtg ccagttattt acgctccggc
    10261 gaaaaccggc aacatttttg tgctcgatcg tcgcaatggc gaactggtgg ttccggcccc
    10321 ggaaaaaccg gtgccgcaag gtgctgcgaa aggcgattac gttactccga cccagccgtt
    10381 ctctgaactg agcttccgtc cgaagaaaga tttgagcggt gcggatatgt ggggagccac
    10441 catgtttgac caactggtgt gccgcgtgat gttccaccag atgcgctatg aaggcatttt
    10501 cacgccgcca tctgaacagg gcacgctggt cttcccgggt aacctgggaa tgtttgaatg
    10561 gggcgggatt tccgttgatc caaatcgtga agtggcaatt gccaacccaa tggcactgcc
    10621 gtttgtttcg aaactgatcc cacgcggtcc gggtaacccg atggagcagc cgaaagatgc
    10681 caaaggcacg ggtacggaat ccggcattca gccacagtac ggtgtaccgt atggtgtcac
    10741 gctcaacccg ttcctctcac cgtttggtct gccgtgtaaa cagccagcat ggggttatat
    10801 ctcggcgctg gatctgaaaa ccaatgaagt ggtgtggaag aaacgtattg gtacgccgca
    10861 ggacagtatg ccgttcccga tgcctgtacc ggtgccgttc aatatgggta tgccgatgct
    10921 gggcgggcca atctccacgg cgggtaacgt gctgtttatc gccgctacgg cagataacta
    10981 cctgcgcgct tacaacatga gcaacggtga aaaactgtgg cagggtcgtt taccagcggg
    11041 tggtcaggcg acgccaatga cctatgaagt gaatggtaag cagtatgtgg tgatctccgc
    11101 aggcggtcac ggttcatttg gtacgaagat gggcgactat attgtggctt atgccctgcc
    11161 ggatgatgtg aaataaccat aatgcccgga gagatccggg catatttccg aatacggtct
    11221 ttttataccg taaaccctaa catcatcccc gtatcttcat gctccagcag atggcagtgc
    11281 gccatataag catgttcttt cggtgcgtcg tgattaaact tcaccagcac ttcactgaca
    11341 ttgccttcta ccttaacggt atctttccag cccgcgcgat gagccgctgg cggtttgcca
    11401 ttttctgaca agatacggaa ctgcgtgccg tgaatatgga acggatgcag catcatgtcg
    11461 cccacgccag agataaccca acgttcgtac tgccctttcg ccgccgcaaa catcggctta
    11521 ttcatatcaa acgcctgacc gttgatttta ttggcatggt ggaaatcgaa cttcccgccg
    11581 tggttcatat gattcatatt accgtgcccc atatggccca tcatctggct gtgatccatt
    11641 ccggccatcg cctgatcgcc atatttctcc attagcatct gcatacccat catatcgagc
    11701 atcgggtcca tagaaagttg cagcttgcgt accgtcagcc cttccagcga aggtaacgca
    11761 ggcaggctac ttaatgtgtc tggcaaagca ccggaggcac taatagcaat cggctgaatc
    11821 cgcattaccg gatgcggctt gtcaaacggc gcaatcgcca tccccatctg gctgaccggt
    11881 agcgtcacca ggtcaaaggg tttgttgtcg ttaacctcca ccagcacttc aaaacgctcg
    11941 cccatcagca ccggcagctc gctcaccttc accggttcag gtagcagacc accgtcgctg
    12001 gcaatcacat acagcgggcg attgtcgctg gtggcgaaat tgagcgagcg ggcattacag
    12061 ccattgagca aacgcaggcg cagccaacca cgcggggcag cgtgttgtgg gtagattgca
    12121 ccgttggtca gcagcgtatc gccaaaccag cccacggcgg cggtcatcac atccagttga
    12181 taatcaatct gcccatcagc gttaaatttt ttatcctgaa caatcaccgg aacatcatcg
    12241 ataccccact gttttggcag cattaatttc aggatctcgt catcttcaat taccaccagc
    12301 ccagccaacc ccatcgccac ctgtcgccca gtcttgccat gttgatgtgg atggaaccag
    12361 caagtagcgg caggttgatc aacgttcaac gtcaccgagc gcttgccacc tggcggaata
    12421 attccctgcg ggccgccgtc gacttcaccc ggtacttcca gcccgtgcca gtgcaacgtc
    12481 gtctcttccg tcagttggtt atagatatca accgttaccg ctttgccgcg ctgtaatttc
    12541 accgccggcc ccagcagatt gccgttatag ccccaggtag ttgcagtttt ctcgccaaag
    12601 gtagactgac ctgcgccaat agttaactga atgcgattac gggcatcggt cgtgagcaaa
    12661 tcagggatcg gtaacgttgg gcgttccgcc gcaaagactg cgcggctcca cagcggcaag
    12721 gctgaagcca cacccagcgc gacggaatat tttaagaaat cacgacgttg catagttatt
    12781 tccttattct taagcaggcg aaacaaaatc aaacgttgag catagtcctt ccccttacgg
    12841 gaaggtcaag ccgcagacac aatttaatcg acaataatgg tcgtcgcctc gctcgcagtg
    12901 tgctaacgtt tatcttcttt aagcccctgg tagaagcaat gaagacgttt ttcagaacag
    12961 tgttattcgg cagcctgatg gccgtttgcg caaacagtta cgcgctcagc gagtctgaag
    13021 ccgaagatat ggccgattta acggcagttt ttgtctttct gaagaacgat tgtggttacc
    13081 agaacttacc taacgggcaa attcgtcgcg cactggtctt tttcgcccag caaaaccagt
    13141 gggatctcag taattacgac accttcgaca tgaaagccct cggtgaagac agctaccgcg
    13201 atctcagcgg cattggcatt cccgtcgcta aaaagtgcaa agccttggcc cgcgattcct
    13261 taagcctgct tgcctacgtc aaataatccc tgataccttt ttgtagaaat attgaccgtg
    13321 catccgcggt caatgttagc tattatgttg cgcccttttt ttacgggtgt taacaaagga
    13381 ggtatcaacc catggccgaa aaaaaacagt ggcatgaaac gctacacgac cagtttgggc
    13441 agtactttgc ggtagataac gttctgtatc atgaaaagac cgatcaccaa gatctgatca
    13501 tttttgagaa cgctgcattt ggtcgcgtaa tggcgctgga tggcgtagta caaaccaccg
    13561 agcgcgacga gtttatctat catgagatga tgacccatgt tccgctactg gcccacggtc
    13621 acgcgaaaca tgtgctgatt atcggcggcg gcgacggtgc catgctgcgt gaagtaaccc
    13681 gacataaaaa cgttgagtca atcacgatgg tggaaatcga tgcgggtgtc gtgtcgttct
    13741 gccgtcagta tctgcccaac cataacgccg gtagctacga cgatccgcgc tttaagctgg
    13801 tgatcgacga tggcgtcaat ttcgttaatc aaaccagcca gacctttgat gtcattatct
    13861 ccgactgcac cgatcctatc ggtcccggcg aaagtctgtt cacctcagca ttttatgaag
    13921 gctgcaaacg ttgcctgaat cctagcggta tcttcgtcgc acaaaacggc gtctgctttt
    13981 tacagcagga agaagccatc gacagccatc gcaaactcag ccattacttc agcgacgttg
    14041 gcttttatca ggcggcgatc ccgacctatt acggcggtat catgactttt gcatgggcga
    14101 cagataacga cgccttacgc catctctcaa ccgaaattat tcaggcgcgt tttctcgctt
    14161 ctggcctgaa atgccgttat tacaatccgg caatccatac ggcagctttt gccttacctc
    14221 agtatctgca agatgcactg gcttcacagc cgtcctaagg agaagataag aaattgaaaa
    14281 aactgaaact gcatggcttt aataatctga ccaaaagtct gagtttttgt atttacgata
    14341 tctgctacgc caaaactgcc gaagagcgcg acggttatat tgcttatatc gatgaactct
    14401 ataatgccaa ccgtctgacc gaaatcctgt cagaaacctg ttccattatc ggggccaata
    14461 ttcttaacat cgcccgccag gattacgaac cacagggtgc cagcgtcact attctggtga
    14521 gtgaagaacc ggttgacccg aaactcatcg acaaaacaga acaccccggc ccactgccag
    14581 aaacggtcgt tgcccatctc gataaaagtc atatttgcgt acatacctac ccggaaagcc
    14641 atcctgaagg tggtttatgt accttccgcg ccgatattga agtctctacc tgcggcgtga
    14701 tttctccgct gaaggcgctg aattacctga tccaccagct tgagtccgat atcgtaacca
    14761 ttgattatcg cgtgcgcggt tttacccgcg acattaacgg tatgaagcac tttatcgacc
    14821 atgagattaa ttcgattcag aactttatgt ctgacgatat gaaggcgctg tatgacatgg
    14881 tggatgtaaa cgtctatcag gaaaatatct tccataccaa gatgttgctt aaagagttcg
    14941 accttaagca ctacatgttc cacaccaaac cggaagattt aaccgacagc gagcgccagg
    15001 aaattaccgc tgcgctgtgg aaagaaatgc gcgagattta ttacgggcgc aatatgccag
    15061 ctgtttaacg gctctggcgg agctccaggc tccgccagat ttatttactt ctgctgcacg
    15121 aaattgcggt aagccgccac gacctgcaga aaatcctcaa cgccgcatag cgacaggctt
    15181 tcttcgtcgt agtagttcat cccctcttcc atttcatcgc cagcgaattc cagttgattg
    15241 gcgcgaacca tcacctcttc accgtccatc cacagggtgt attcatgccc tgcccgttgc
    15301 caggaccgtt cgctaccttt cagtgcgtgc gctgcttgtt ccacttcatc aagcaaggcc
    15361 aggttttctt tcacctcttc attaaaccag tgcccgacca cttcatgccc catggacata
    15421 cgcaccttta ccactccggt aatatcgcgc agaaattcgt aatccatagt gtgttcctct
    15481 gctcccggca atgcgccgaa atcgcattgc gccattgatg taattatcgc agccttaccg
    15541 gagaaaaaca gcggaacggc gatggtttag aaataaaaaa tgcccgggaa tctcattcac
    15601 cgggcattgt gtcgtttatg cgcagcgcgt gcgcttactt attacaccgc agtctggaaa
    15661 atcaccccat cggctttttc ggtgtactga gaaagttggt tgaagttcag ataacgataa
    15721 gtatcaacgg cagttttatc tacttgcgca acgtaggtct ggtactcttc cggcgtcggc
    15781 agtttgccaa tcagcgccgc aacagccgcc agttctgcag aagccaggaa gacattcgcg
    15841 ccagtcccca gacggttcgg gaagttacgg gtagaggtgg aaaccaccgt cgcaccgtct
    15901 gctacacgcg cctggttacc catacacaga gaacagcccg ggatctcgat acgagccccg
    15961 ctcttaccga agacgctgta gtagccttct tcagtcaact gtgcggcgtc catacgggtt
    16021 ggcggtgcca cccacaggcg ggtcggcaac tggcctttat gcgcatccag cagtttaccc
    16081 gcagcacgga agtgaccgat gttagtcatg caagaaccga taaatacttc gtcgatcttc
    16141 tcgccctgta ccgcagacag cggacgcgcg tcatccgggt cgttcggagc acacaggatt
    16201 ggctctttaa tatccgccag atcgatgtca atcactgccg cgtattccgc atctgcatcg
    16261 gcttccagca gctcaggatt cgccagccat ttttccatgc cctgaatacg acgttccagg
    16321 gtacgacgat cgccgtaacc ttccgcgatc atccacttca gcaggacgat attagagtta
    16381 aggtattcga tgattggttc tttgttcagc ttgatagtac aaccagcggc agaacgctca
    16441 gcggacgcat cggtaagctc aaaggcctgc tcaactttca gatccggcag accttcaatt
    16501 tccagaatgc ggccagagaa gatgtttttc ttgcctttct tctcaacggt cagcagacct
    16561 tgtttgatgg catacagcgg aatggcgtgt accagatcgc gcagggtgat gcccggctgc
    16621 attttgcctt tgaagcgcac cagaacggat tccggcatat ccagcggcat tacgcctgtt
    16681 gcggctgcaa atgccaccag accagaaccc gccgggaaag agataccgat cgggaaacgg
    16741 gtatgggagt cacctccggt accgacggta tccggcagca gcatacggtt cagccaggag
    16801 tggattacgc cgtcacccgg acgcagcgac acaccgccac ggttcataat gaagtccggc
    16861 agcgtgtggt gcgtgttcac gtcaactggc ttcggatacg ccgcggtgtg gcagaaagac
    16921 tgcatcacca ggtcagccga gaagcccagg cacgccaggt ctttcagttc atcacgggtc
    16981 atcgggccgg tagtgtcctg tgaacctaca gaagtcattt tcggttcgca gtacgcgccc
    17041 ggacgaatgc ctttcacgcc acaggcacgg cctaccattt tctgcgccag cgagaagccg
    17101 cgatcgctct cagcgacatc tttcgcctga cggaacacat cactgtgcgg cagaccaagt
    17161 gcttcacgcg ctttggtggt caggccacgc ccgataatca gcgggatacg gccgccagca
    17221 cgcacttcat caatcagcac gtcggttttc agttcgaagg tcgccagcag ttcgcctgtt
    17281 tcgtggttac gcacttcacc tttgtacggg taaacgtcaa tcacgtcgcc catgttcagg
    17341 ttagagacgt cgacttcgat tggcagtgca cccgcgtctt ccatcgtgtt aaagaagatg
    17401 ggtgcaattt taccgccgag gcacaaacca ccgccgcgtt tgttcggcac atgtggaata
    17461 tcatcgccca taaaccacag aacggagttc gtggcggatt tacgcgatga acccgtaccc
    17521 acaacgtcac cgacgtacgc cagcgggaaa cctttctgtt gcagagcttc aatctgtttg
    17581 atcgggccaa caacacctgg ctggtctggc tcaatacctt cacgggcgtt tttcagcatc
    17641 gccagcgcgt gcagtgggat atccgggcgc gaccacgcat ccggtgccgg agaaaggtca
    17701 tcggtgttgg tttcgccagt gactttgaag acggtaacgg tcagtttttc agccagcgcc
    17761 gggcgattca taaaccattc ggcatccgcc caggactgca ttacctgctt cgcatattcg
    17821 ttgcctgctt tcgctttctc ttctacgtca tagaagttat cgaacatcag cagtgtgtga
    17881 gaaagtgctt tggcagcgat cggtgccagt ttggcatcat ccagcgcgtc gatcagcgga
    17941 tgaatgttgt aaccaccctg catggtgccc agcagttcga tggctttttc cggagtcagc
    18001 agaggggatt tggcttcgcc tttcgcgata gcagccagta agcctgcttt gacataggcg
    18061 gcttcatcga cgccaggggg aacacggttg gttaacagat ctaacaggaa ttcttcttcg
    18121 cccgcgggcg gttttttcag cagctctaca agtgcggcca tttggtttgc atccaggggt
    18181 ttgggcgcaa tcccctcagc ggcacgctca gctacgtgct tacggtattc ttctagcacg
    18241 acggttctcc tcgctctcat tgtcatagtg cggcaggcga ttctcttcac gctcctgtga
    18301 gacagcagtt tgtagggtaa atgcccagta ccgcaacggg cagaatagca ggattttgac
    18361 gacgtgttaa tctgtttaca aaaaagcaac ataaaaaagt ggctgaatcg ttaaggatgg
    18421 tctagagatt gtttccctcc gtaaaaactt cgttaattcg catggtgata atcacctttc
    18481 tcaacgaatc ccaagattag tcaaaattta aactaccgcc tctttatact cggattaaca
    18541 gcacctgcgg gtgacagttc gccgaccatt gcgatttcct tgagatccga attatgaaaa
    18601 tgactttgcc gtttaaaccc catgtgctgg cactaatttg cagtgccggg ctttgtgccg
    18661 cctctgccgg gctatatata aaaagccgca cagtggaagc ggctgtggaa acgcaatcga
    18721 cacaactggc tgtgtctgac gctgccgcgg ttacgcttcc tgcaacggtt tccgcgcctc
    18781 ccgtaacacc cgccgtcgtt aaatccgcat tcagcactgc acaaatagat caatgggtcg
    18841 cgcccgtcgc gctgtatccc gacgccctac tttcgcaggt gctgatggca tcaacctatc
    18901 cggcaaacgt tgctcaagca gtgcaatggt cgcacgataa tccacttaaa caaggcgatg
    18961 ctgctattca ggcggtatct gaccagccgt gggacgccag cgttaaatca ctggtggcct
    19021 ttccacaatt gatggcattg atgggcgaaa acccgcaatg ggtgcaaaac ctgggcgatg
    19081 cttttctggc gcagccgcag gacgtgatgg actcggtaca gcgattgcgg caactggcgc
    19141 aacaaaccgg ttcgctgaag tcatcaaacg aacaaaaagt tattaccaca acgaagaaag
    19201 ctgtaccggt aaaacagaca gtcacggcac ccgtcatacc atccaatacc gttttaactg
    19261 ccagccccgt cattacagag cctgcaacaa ccgtcatttc cattgagccc gccaatcctg
    19321 atgtggtcta tattcccaac tacaacccaa ccgtggttta cgggaactgg gccaatactg
    19381 cgtatccgcc ggtttatctg ccaccaccag ccggagaacc gtttattgac agctttgtgc
    19441 gcggattcgg ctatagcatg ggtgttgcta ccacgtacgc actattcagc agcatcgact
    19501 gggatgacga cgatcatgac catcatcatc atgacgatga tgattatcat caccacgatg
    19561 gcggtcatcg tgacggtaat ggctggcaac acaacggcga caacatcaat atcgacgtca
    19621 acaatttcaa ccgtatcacc ggtgagcatc ttactgataa gaatatggca tggcggcaca
    19681 atccaaacta ccataatggt gtgccctatc atgatcagga tatggcaaag cggtttcatc
    19741 aaaccgatgt caacggcgga atgagtgcca cgcagctacc tgctccaaca cgcgacagcc
    19801 agcgtcaggc ggcagcaagt cagtttcagc aacgaacaca cgccgccccc gtcattacac
    19861 gagataccca acgtcaggca gcggcacagc ggtttaatga agctgaacac tatgggagct
    19921 atgacgactt ccgcgacttc agccgtcgcc aacccctgac ccagcaacaa aaggacgccg
    19981 ctcgtcagcg ttatcagtca gcttctcctg agcagcgcca ggcagttcgc gagagaatgc
    20041 agactaaccc gcagatccag cagcgaagag aggcagcgcg tgagcgcatt cagcccgcct
    20101 cgcctgagca gcgccaggca gtccgcgaga aaatgcagac taacccacag atccagcagc
    20161 gaagagacgc agcgcgtgag cgtattcagt cagcctcgcc tgagcagcgc caggtgttta
    20221 aggaaaaagt acagcagcgc ccactgaacc aacagcaacg tgataacgcc cgccagcgtg
    20281 ttcaatcagc atcacctgaa caacgtcagg tttttcggga gagagttcag gagagccgcc
    20341 cacaacgtct aaacgacagt aaccgtactg ccagattgaa taacgatcaa cggtcagcag
    20401 tacgcgaacg tctctctgag cgcggagcaa ggcgactgga aaggtaaatt acagacgtaa
    20461 aaaaagcggc gtggttagcc gcttttttaa ttgccggatg ttccggcaaa cgaaaaatta
    20521 cttcttcttc gctttcgggt tcggcaggtc ggtaatgcta ccttcgaaca cttctgccgc
    20581 caggcccaca gactcgtgca gagtcgggtg cgcatggatg gtcagcgcga tgtcttcagc
    20641 gtcacaaccc atttcgattg ccaggccgat ttcacccagc agctcgccgc cgttggtacc
    20701 gacaatcgca ccaccgatca cacggtgaga ttctttgtcg aaaatcagct tggtcatacc
    20761 gtctgcgcag tcggaagcga tagcacgacc agaagcagcc cacgggaagg tggcggtttc
    20821 atagctgatg cctttctctt tcgcttcttt ctcagtcaga cctacccatg caacttctgg
    20881 ttcggtatag gcgatagacg ggataacttt cggatcgaag tagtgttttt taccggcgat
    20941 aacttcagcg gcaacgtgac cttcgtgaac acctttgtgt gccagcatcg gctgaccaac
    21001 gatatcgccg atagcaaaga tgtgcggtac gttggtacgc agctgtttgt caacgcggat
    21061 gaaaccacgg tcgtccactt ccacgccagc tttgcctgcg tcgaggtttt taccgttcgg
    21121 cacacgacca atcgctacca gcacggcgtc gtaacgctgc ggttcagcgg gtgctttttt
    21181 gccttccatc gtcacataaa taccgtcttc tttcgcttca acggcggtaa ctttggtttc
    21241 cagcatcagg ttgaatttct tgctgatacg cttggtgaag actttaacga tgtctttgtc
    21301 agctgccggg ataacctggt cgaacatttc aaccacgtca atctgtgaac ccagcgcgtg
    21361 gtatacggtg cccatttcca gaccgatgat accgccaccc attaccagca ggcgttctgg
    21421 tacttctttc agttccagcg cgtcagtgga gtcccagata cgcggatctt catgcggaat
    21481 aaacggcagt tggatcgggc gagaacccgc tgcaatgatc gcgttgtcga agttgatcac
    21541 ggttttaccg ttctcacctt caacttccag ggtgttagcc ccggtaaatt tacccagacc
    21601 gttgaccact ttgactttgc ggcctttcgc cataccagcc agaccaccgg tcagctgatt
    21661 gatcactttc tctttccagg tacgaatctt gtcaatatcg gttttcggtt cgccgaagac
    21721 gataccgtgt tcagccagcg ctttggcttc ttcgataact tttgctacgt gcagcagtgc
    21781 tttagaaggg atacagccga cgttcaggca aacaccgcca agggtgttgt aacgttctac
    21841 gattacggtt tccagaccta aatcagcgca acggaaggca gcggagtaac ctgcggggcc
    21901 tgccccaagt accacgacct gagttttgat ttcagtactc atcatgacct ctatatattt
    21961 atctccggcg gtcatacccg tcgtctttca ggccgcagcg gcgttagctt cacgccctca
    22021 ccccagtcac ttacttatgt aagcccctgg ggattctggc gcttgctacc ttgctgcacc
    22081 cagaaatcca tagggtatgt gaagtaatac cctaaccacc accgggtcgt tctatccgtc
    22141 ggtattttac aaaattgtta acaattttta aacaacaaac ggcaaccgat ttgtctattc
    22201 gctaataacc tcaatacatt catgagatta ccagaaaaaa gccggccgtt gggccggctc
    22261 ttttacttac atcaccagac ggcgaatgtc agacagcgtg ttgttaatga tggtaatgaa
    22321 acgggcacca tcagcaccgt cgatcacgcg gtggtcgaag gagagagaaa tcggcagcat
    22381 cagacgcggc acgaactctt taccattcca caccggctcc atcgcggact tggaaacgcc
    22441 gaggatagcc acttccggcg cgttcacaat cggcgcgaag tgggtagtac ccaggccgcc
    22501 gatgctggag atggtgaagc aaccgccctg catttcgccc gcagtcagct taccgtcacg
    22561 cgctttctta gaaatagtca tcagctcgcg agacagctcg atgatgcctt tcttgttgac
    22621 gtctttgaat accggaacaa ccagaccgtt cggggtatcc accgccacac cgatgttgat
    22681 gtatttcttc agggtcagac gctgaccgtc ttccgacagc gaactattga agcgaggcat
    22741 ctgctcaaga gctgcagcaa cggctttcat gatgaagaca accggggtga tcttcacatc
    22801 cagcttacgt ttcgccgctt cttcgttctg ctgtttacgg aacgcttcca gctcggtgat
    22861 atcggttttg tcgaagtggg taacatgcgg gatcatcacc cagttacggc tcaggttagc
    22921 accagaaatt ttctggatac ggcccagttc cacttcttcg atttcaccaa acttgctgaa
    22981 gtccaccttc ggccacggca gcatgcctgg gataccgccg ccagtcgccg ccggagctgc
    23041 ttctgcacgt ttgatagctt ctttcacgta agcctgaacg tcttcgcgca ggatacgacc
    23101 tttacggcca gtgcccttca ctttcgccag gttaacacca aactcgcgtg ccagacggcg
    23161 gatcagcgga gtcgcgtgaa cataagcgtc gttttcagca aattcagatt tgccttccgc
    23221 tttcgcagct ggtgctgctg ccggggcttc agcttttgct gccggtgccg gcgctgccgc
    23281 ttcctgtttc gcaggagctg ccgcaggcgc tgcgccttca acttcgaaga tcataatcag
    23341 cgagccagtt ttcactttat cgccaacgtt gactttcagt tccttcacga cgcctgcaaa
    23401 cggcgccgga acttccatag aagctttgtc gccttctacg gtgatcagtg actgttcagc
    23461 ggcaactttg tcgcccactt tcaccatcac ttcagtcact tcaacttcgt caccgccgat
    23521 atccggaacg ttaacttctt tcacgccagc tgctggtgca ggggccgctg ccggagccgc
    23581 ttcctgttta gccgccggag ctgccgcgcc tgcttcaccc gcgacttcga agaccataat
    23641 cagcgagccg gtagacactt tgtcacccac gttcactttg atctctttca cggtgccagc
    23701 aaacggagcc ggaacttcca tagaagcttt atcgccttct acggtgatca gcgactgttc
    23761 agcttcaact ttatcgccaa ctttcaccag gatttcggtc acttcaactt cgtcgctgcc
    23821 gatatccgga acgttaacgt cttttgccgc cgcagccgcg ggtgctgctg ccggagctgc
    23881 ttctttcttc tcttctgcct gagcaggtgc agcgtctgct gcaccgtcgg cggaatcgaa
    23941 aatcataatc agtgcgccgg tctgggtttt atcgccaaca gagactttga tctctttaac
    24001 gatacccgcc tgcggagacg gaacttccat agaggctttg tcgccttcta cggtgatcag
    24061 cgactgttcg gcttcaactt tgtcgcccac tttgaccagg atctcggtga tttcaacttc
    24121 atcagccccg atgtccggta ctttgatttc gatagccatt attcttttac ctcttacgcc
    24181 agacgcgggt taactttatc tgcatcgatg ttgaatttgg cgattgcgtc agcaaccact
    24241 ttcttatcga tttcgccacg tttagccagt tcgcccagcg ccgcaaccac gacataagaa
    24301 gcatcaactt cgaagtggtg acgcaggttc tcacggctgt cggaacgacc gaagccatca
    24361 gtacccagta cgcggtagtc gtcagccggt acgtaagtac ggacctgctc agcgaacagt
    24421 ttcatatagt cggtagatgc cactgccgga gcgtcgttca tcacctgagc gatatacgga
    24481 acgcgcggag tttccagcgg atgaagcatg ttccagcgtt cacaatcctg accatcacgc
    24541 gccagctcgg tgaaggaggt cacgctataa acgtcagaac ctacgccgta atctttcgcc
    24601 aggatctctg ccgcttcacg gacgtgacgc aggatagaac cggagcccag cagctgaact
    24661 ttacctttgc taccttcaat ggtttcgagt ttgtagatac ctttacggat accttcctca
    24721 gcaccttccg gcattgccgg catgtggtag ttttcgttca gcgtggtgat gtagtagtaa
    24781 acgttctctt gtttttcacc gtacatacgc tccagaccgt catgcataat gacagcaact
    24841 tcgtaagcgt aagccgggtc gtaagagata cagttcggaa tagtcagcga ctgaatgtgg
    24901 ctgtgaccat cttcatgctg cagaccttct ccgttcaggg tggtacgacc ggaagtaccg
    24961 ccgatcagga agccacgcgc ttgctggtcg ccagccgccc agcacagatc gccaatacgc
    25021 tggaagccga acatcgagta atagatgtag aacgggatca tcggcagatt gttggtgctg
    25081 taagaggtcg ccgctgccag ccaggaacaa cctgcgccca gctcgttgat cccttcctgc
    25141 agaatctgac ctttctcgtc ttctttatag taagcaacct gctcgcggtc ctgcggggtg
    25201 tactgctgac cgttcgggct gtaaatacca atctgacgga acagaccttc cataccgaaa
    25261 gtacgcgctt cgtcggcgat gatcggtacc agacgatctt tgatcgactt gttcttcagc
    25321 attacgttca gggcacgaac gaaagcgata gtggtagaga tctctttgct ctgctcttcc
    25381 agcagcgcgc cgaagtcttg caggctcggc agctcaagct tctcggtgaa gttcggctga
    25441 cggcttggca gataaccgtg cagtttctga cgctgtgcgt gcagataggt atgctcttca
    25501 gaaccttccg ggaaggtgat gtacggcagt ttttcgatat ctgcatcaga caccggcaca
    25561 ttgaaacggt cgcggatgtg acgcacgccg tccatgttca ttttcttaac ctggtgcgcg
    25621 atgtttttac cttcagccgc gtcgcccatg ccgtaacctt taatggaatg agcaaggatt
    25681 actgtcgctt tgcctttggt ttcctgcgct ttcttgaatg cagcgtagat tttcttcgga
    25741 tcgtgaccac cacggttcag tgcccagatc tgctcgtcag tccagtctgc aaccagtgct
    25801 gcggtttcag gatatttacc gaagaagtgt tcacgaacgt acgcaccatc tttcgatttg
    25861 aaggtctggt agtcgccgtc aacggtttcg ttcatcagct ggatcagttt accgctggta
    25921 tctttacgca gcagttcatc ccaacggcta ccccacatca ctttgatcac gttccagcca
    25981 gcaccttcga agatgccttc cagttcgttg atgatcttgc cgttaccggt gaccgggccg
    26041 tcaagacgct gcaggttaca gttgataacg aagaccaggt tatccagttt ttcacgggta
    26101 gcgatggtga tcgcaccttt ggattccggt tcgtccattt caccgtcgcc gaggaacgcg
    26161 taaacggtct gtttagaggt atctttcagg ccacggtgtt ccagatattt caggaattta
    26221 gcctggtaaa tagcaccaat cggccccagc cccatagata cggtcgggaa ctgccagaat
    26281 tccggcatca gtttcgggtg cggataggaa gagaggccat tgccgtgaac ttcctgacgg
    26341 aagttatcca gctgctcctg agtcagacga ccttccagga aagcacgagc gtacacgccc
    26401 ggggagatgt ggccctggaa gtaaaccagg tcgccgccat cctgctcgtt gcgtgcacgg
    26461 aagaagtggt taaagcacac atcataaatg gttgcggaag actggaagga cgccatatgg
    26521 ccgcccagtt cgaggtcttt tttcgacgca cgcagcaccg tcatgatggc gttccagcgg
    26581 atagctgaac gaatacggcg ttccagttcc agattacccg gatactccgg ttgttcttca
    26641 acggggatgg tgttgatgta gttgctgata cctgtgcctg cggctacgtt tacaccgcct
    26701 ttgcgggctt cagcaagcag ttggtcgatc agatactgag cacgctcaac accttcttca
    26761 cggatgaccg attcgatcgc ctggagccag tcgcaagttt cgatcggatc cacgtcattt
    26821 gggaaacgtt ctgacatggg ttattcctta tctatctaat aacgttgagt tttctggaac
    26881 ctgtcccatt gaactctcgc cggaaagctc aataagacag gttctacgtt tagttgccgc
    26941 gcttttatat gcgcttgatt tacaacatct tctggataat ttttaccagt aaaatcacta
    27001 attctttcgt tgctccagac gacgcagaga acgctcacgg cggctctctt cacgacttct
    27061 gtcgagcaaa atttcttcga taaaggccag atggcgatgc gatgcttcgc gcgcttcttc
    27121 cggcttaccg gccataatcg cttcaaatat gcgggtgcgg tgactactca ccagcggcag
    27181 catctcgcga cgcgaataga gcaattcgaa gttctggcgg acattctggg ccaacatcgg
    27241 ctccatacac cttagcagat gaagcagaac cacattgtgg gccgcttcag tgacagcaat
    27301 ctgatactgg agtacggcgt ttgattccgc gtccagatcg ccagactgct gcgccagttc
    27361 tatggcgtga tggagttcac ggatgcgttc cttgtcttca tcggtactac gcagcgcggc
    27421 gtaataagcg gcgatacctt ccagggcgtg tcgtgtttcg agcaagtcat actgtgactc
    27481 aggatggtcg gagagcagct ccaccagcgg atcgctgaag ctttgccata ggctgctctg
    27541 gacaaaagtg ccgccaccct ggcgacgaag caacaagccc ttcgcttcga gacgttgaat
    27601 cgcctcacgc aaggagggac gggagacgtc aaactgtttt gccagttcgc gttccggtgg
    27661 gagtttttcg cccgggcgga gagtgccttc gaggatcaaa aactccagtt gctgctcaat
    27721 cacatcggag agttttggtt ggcggatttt gctgtaggcc atgagttcct gtcttaagcc
    27781 acttgccgaa gtcaattggt cttaccaatt tcatgtctgt gacgctaaag taacaaagta
    27841 ttcaccttat gtccatacag gttttgattg aaatcatgaa actgtgcaca ttttaacaac
    27901 ttgacatata taacgtttca aagttgtaac tatgcacaaa tgtagacttt acgtaggaaa
    27961 gggatttttt aacgattatt aaactataaa aatccgaatt gaaccgattc acttaccaat
    28021 tttgtgattt ttaattcaat taaaacgaat ttaaattcat tctacatatt gagaggggtt
    28081 gaggctgagc tttacaaacg gtttcttttt aagcaactca tcttcaacca tgcataaagc
    28141 gggtgcattc gctgccacat accattattc ttgatctgac ggaagtcttt ttgtaacaat
    28201 tcaaacttct ttgatgtaaa caaattaata caacaaacgg aattgcaaac ttacacacgc
    28261 atcactgcgt agatcaaaaa aacaaccacc gcacgaggtt tcatgatgga aggtcaacag
    28321 cacggcgagc agctaaagcg cggccttaaa aaccgccata ttcagcttat cgcgctgggt
    28381 ggcgcgatag ggaccgggtt attcctgggt agcgcctccg taatacagtc cgcagggcca
    28441 gggattatcc tgggttacgc cattgctggt tttatcgcct ttctgatcat gcgtcagctg
    28501 ggtgaaatgg tggtcgaaga acctgtcgca ggctccttta gccactttgc ttataaatac
    28561 tggggcagtt ttgccggttt cgcctctggc tggaactact gggtactgta cgttttagtt
    28621 gccatggctg agctgactgc cgtgggtaaa tacattcagt tctggtatcc ggaaatcccc
    28681 acctgggttt ctgccgccgt attctttgtg gtgattaacg ccatcaacct gaccaacgtt
    28741 aaagtgtttg gcgagatgga gttctggttt gccattatca aagttatcgc tgtggtagcg
    28801 atgatcatct tcggcggctg gctgctattc agtggcaaca gcggcccgca ggcgaccgtt
    28861 agcaacctgt gggatcaggg tggtttcctg ccgcacggct tcaccgggct ggtgatgatg
    28921 atggcgatta tcatgttctc gttcggtggt ctggaactgg tggggatcac cgcagcagaa
    28981 gctgataacc cggagcaaag tataccgaaa gcaactaacc aggttatcta ccgcatcctg
    29041 attttctata ttggttcgtt agccgttctg ctctcactga tgccgtggac ccgcgttacc
    29101 gccgatacca gtccgtttgt gctgatcttc cacgagttag gcgatacctt tgtggcgaat
    29161 gcgctgaaca tcgtggtact gactgcggcg ctctccgtgt acaacagctg cgtatattgc
    29221 aacagccgta tgctgtttgg tctggcacaa cagggtaatg cgccaaaagc gctggcgtct
    29281 gtcgataaac gtggtgtacc agtaaatacc attctggtgt ctgcactggt aacggcgttg
    29341 tgcgtactga ttaactacct tgccccagag tccgctttcg gactgttaat ggcgctggtg
    29401 gtatctgcac tggtaatcaa ctgggcgatg attagcctgg cgcatatgaa attccgtcgc
    29461 gccaagcagg aacaaggcgt ggtaactcgc ttccctgctc tgctttatcc gctgggtaac
    29521 tggatctgcc tgctgtttat ggcggcggta ctggtgatta tgctgatgac cccaggaatg
    29581 gcgatttcgg tatacctgat cccggtatgg ctgatcgtgt taggtatcgg ctatctgttt
    29641 aaagagaaaa ccgccaaagc cgtaaaagcg cattaatctc tctacgccct cacccgtaca
    29701 gggtgagggc aataatcttt acaccaacgc cccgtaaatc gtcagtagtg caatcaccac
    29761 cacgaccacg aacgaggttt tcttcgccat tgaaaccgct gccttcggcg tctccacctt
    29821 atcgacatgc ggttcacgcg ccagagagaa ctgcgccaga cgcgttaaca cctgatactg
    29881 cgaagtatgg aagtcaccca gcgaagcaaa ccaggccggt aacgctttct ccccatgacc
    29941 gatcaaggca tataccacac ccgcaagacg aaccggcacc caatccagta catgaagcac
    30001 ggcatcaatg ccggactgta aacgatgatg cggcgtctgg tatcgcgcca gccagtattg
    30061 ccatgcacgc aaaaacgcat accccatcag cgtaacgggt ccccagattc cccccacaat
    30121 caaccagaac agcggagcaa gataaaaacg aaagttaatc cacagcaatg cattttgcag
    30181 ctcacgcaaa tactcacgtt catcgcagcc tgccgggacg ccgtgaatca tggtgagttc
    30241 gccagccatc gtgacacggg catggctatc attacgtgaa gcagctgtca gataagcatg
    30301 ataatgaaga cgaactttac ctgcgccaat acacagcaaa ccaatcagca gccacaccag
    30361 cagcgtggga acgttgaaca atactccctg caatgcgcgt aacagtaaaa aagtcacgcc
    30421 catcgcaata atggtcatgc ctaacgtgcg cccgagagaa aaatgtttca cccgccgaaa
    30481 gaacgcttca agacgatgat caagctgcca gtgctcgccc aacttaaaca ggcgctcgaa
    30541 aattaacacc agtaaggttg taaatagcgt catgttgtct ccttgctgac cagcgcacga
    30601 aaccgcgccc aatcaaatgc agggccggga tcggttttcc gatccggcgc aatatcacaa
    30661 tggcccgtca tgttattagc gatatctgga tagcgatcaa tcagtgcccg cgtaaccgcc
    30721 gcaagctgtt gatactgcgc atcggtatac gccagcgtat cggtgccttc aagctcaatc
    30781 ccaatagaaa aatcattgca gcgttcgcgc ccctgatact gagagactcc cgcatgccat
    30841 gcacgtttat cgaaaggaac atactggact atttcaccat cacggcgaat caaacagtga
    30901 gcggagacgc gcaaatgggc gatctcagca aagaaaggat gtgcctgcgg atcaatagtt
    30961 ccagtgaata atgcgtcgat ccacggaccg ccaaactcgc ctggcggcag gctaatattg
    31021 tgcaccacca gcagggtggg tgtttcgtca tccgggcggc aatcgtaatg tggtgaggga
    31081 acgcggcgcg cgccaaccag ccacccctgt tctaacaaca tgcaggatct ccttatatgt
    31141 ggtgctaata cccggttcag agtagcatgt ttctacctta tgattcgtta gctatctgga
    31201 gttttaacat gccgcctcgc cgctataacc ctgacacccg acgtgacgag ctgctggaac
    31261 gcattaatct cgatatcccc ggcgcggtgg cccaggcgct gcgggaagat ttaggcggaa
    31321 cagtcgatgc caacaatgac attacggcaa aacttttacc ggaaaactct cgctctcatg
    31381 ccacggtgat cacccgcgag aatggcgtat tttgcggcaa acgctgggtt gaagaggtgt
    31441 ttattcaact ggcaggcgac gatgtcacca taatctggca tgtggatgac ggcgatgtca
    31501 tcaacgccaa tcaacccttg ttcgaacttg aaggcccatc ccgcgtgctg ttaacgggcg
    31561 aacgcactgc gcttaatttt gtgcaaaccc tttcaggagt tgccagtaag gtacgccact
    31621 atgtcgaatt actggaaggc accaacacgc agttgttgga tacgcgcaaa accttacctg
    31681 gcctgcgttc agctctgaaa tacgcggtac tttgcggcgg cggagcgaat caccgtctgg
    31741 ggctttctga tgccttcctg atcaaagaaa atcatattat tgcctccggc tcagtgcgcc
    31801 aggccgtcga aaaagcgtcc tggctgcacc cggatgcgcc agtagaagtc gaagtagaga
    31861 atctggaaga acttgatgaa gccctgaaag caggagccga tatcatcatg ctggataact
    31921 tcgaaacaga acagatgcgc gaagccgtca aacgcaccaa cggcaaggcg ctactggaag
    31981 tgtctggcaa cgtcactgac aaaacactgc gcgaatttgc cgaaacgggc gtggacttta
    32041 tctccgtcgg tgcgctaact aaacacgtac aagcactcga cctttcaatg cgttttcgct
    32101 aattgctgac agatttatcc gctccatcgc gggcggataa tctccccttc cccaactttc
    32161 ttcgtaacgc ctcgcaaatt tcttgtcttt cgctgcaacg aaataaaaaa cctcggaagc
    32221 tgctttcccg tttcgttttt tgcccctcgc ttgtgctgat ggcgtttgcc aaagtagcgc
    32281 caaccaaatc aaggagcgaa acagatggac aagcaacgcg gttttacact tatcgaactg
    32341 atggtggtta ttggcatcat tgccatttta agcgccattg gtattcccgc ttatcaaaac
    32401 tacctgcgca aagctgcact caccgacatg ctacaaacct ttgtgcctta ccgtaccgcc
    32461 gtagagttgt gcgcgctgga acatgg
//
LOCUS       DADKRT010000026        31437 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.026, whole genome shotgun sequence.
ACCESSION   DADKRT010000026 DADKRT010000000
VERSION     DADKRT010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 31437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31437
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.026"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(80..3361)
                     /locus_tag="JQ356_001027"
     CDS             complement(80..3361)
                     /locus_tag="JQ356_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5107 domain-containing protein"
                     /protein_id="HAY4621193.1"
                     /translation="MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYG
                     VTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPA
                     LVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMT
                     GFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKR
                     AVSAFPIATGTYYKVDYSAGVDISCYKNVPVTTSYMAEKSQYDFVGAWCHDEDGGLLH
                     VANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEE
                     KRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLVIREIGKCN
                     ALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQELPLLDVAKA
                     PLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNR
                     ADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGN
                     SKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARV
                     QREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTL
                     AAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESI
                     EECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELA
                     ARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLN
                     LWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDAREPQQASELL
                     HAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEAMRCLRLAATGDRTINIHS
                     YYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLL
                     SLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFI
                     FNYVH"
     gene            3479..4672
                     /locus_tag="JQ356_001028"
     CDS             3479..4672
                     /locus_tag="JQ356_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HAY4621194.1"
                     /translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV
                     SNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL
                     SPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
                     MPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG
                     SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLK
                     SQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL
                     YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA
                     QLRQI"
     gene            complement(4736..5989)
                     /locus_tag="JQ356_001029"
     CDS             complement(4736..5989)
                     /locus_tag="JQ356_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HAY4621195.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
                     QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
                     KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
                     INDEAVIERIKGKVLDICARYPVYA"
     gene            6317..7507
                     /gene="hmpA"
                     /locus_tag="JQ356_001030"
     CDS             6317..7507
                     /gene="hmpA"
                     /locus_tag="JQ356_001030"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HAY4621196.1"
                     /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
                     LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
                     TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
                     IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISSGVGQTPMLA
                     MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
                     GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIYYECFGP
                     HKVL"
     gene            complement(7552..7890)
                     /gene="glnB"
                     /locus_tag="JQ356_001031"
     CDS             complement(7552..7890)
                     /gene="glnB"
                     /locus_tag="JQ356_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HAY4621197.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(7951..9285)
                     /gene="glrR"
                     /locus_tag="JQ356_001032"
     CDS             complement(7951..9285)
                     /gene="glrR"
                     /locus_tag="JQ356_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HAY4621198.1"
                     /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV
                     LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
                     FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
                     LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
                     NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT
                     HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
                     AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
                     EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(9275..9988)
                     /gene="qseG"
                     /locus_tag="JQ356_001033"
     CDS             complement(9275..9988)
                     /gene="qseG"
                     /locus_tag="JQ356_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HAY4621199.1"
                     /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
                     VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGCWQ
                     NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER
                     QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
                     PHESEKPAPSTHEVTPDEP"
     gene            complement(10153..11580)
                     /gene="qseE"
                     /locus_tag="JQ356_001034"
     CDS             complement(10153..11580)
                     /gene="qseE"
                     /locus_tag="JQ356_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417051.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HAY4621200.1"
                     /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA
                     GVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR
                     GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG
                     NSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETV
                     VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSS
                     HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG
                     ELYLVDESGQDVCFRIELPSSKNTK"
     gene            complement(12138..16025)
                     /gene="purL"
                     /locus_tag="JQ356_001035"
                     /gene_synonym="purI"
     CDS             complement(12138..16025)
                     /gene="purL"
                     /locus_tag="JQ356_001035"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HAY4621201.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
                     APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
                     VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFDLDDAEQLFAHHQPTPVTS
                     VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
                     HKIFNADWIIDGEQQPKSLFRMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRILGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY
                     EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
                     GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
                     SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
                     CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
                     ALVREGITIADAVKRILHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
                     TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
                     MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
                     SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
                     VRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGINADIASLGD
                     DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
                     VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
                     APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL
                     VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
                     LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
                     DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
                     RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
     gene            16286..17842
                     /gene="mltF"
                     /locus_tag="JQ356_001036"
     CDS             16286..17842
                     /gene="mltF"
                     /locus_tag="JQ356_001036"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HAY4621202.1"
                     /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE
                     LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLCNLTAEQLTVAPGHVV
                     VNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA
                     VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD
                     TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT
                     KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML
                     DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLF
                     SRKGSEEKQN"
     gene            complement(17839..18375)
                     /gene="tadA"
                     /locus_tag="JQ356_001037"
     CDS             complement(17839..18375)
                     /gene="tadA"
                     /locus_tag="JQ356_001037"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HAY4621203.1"
                     /translation="MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAV
                     LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
                     GAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
                     RMRRQEIKAQKKAQSSTD"
     gene            complement(18400..19035)
                     /gene="yfhb"
                     /locus_tag="JQ356_001038"
     CDS             complement(18400..19035)
                     /gene="yfhb"
                     /locus_tag="JQ356_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HAY4621204.1"
                     /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQE
                     RLTTYLLSSDADIWLITGSPQPLVEAVYFDKPWLPRVNLIASQIQRGYGGWVLTMRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
     gene            19244..20092
                     /locus_tag="JQ356_001039"
     CDS             19244..20092
                     /locus_tag="JQ356_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417056.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HAY4621205.1"
                     /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA
                     GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL
                     IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN
                     AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN
                     ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
                     LVKKLV"
     gene            20148..20408
                     /gene="yfhL"
                     /locus_tag="JQ356_001040"
     CDS             20148..20408
                     /gene="yfhL"
                     /locus_tag="JQ356_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster ferredoxin YfhL"
                     /protein_id="HAY4621206.1"
                     /translation="MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
     gene            complement(20602..20682)
                     /gene="shoB"
                     /locus_tag="JQ356_001041"
     CDS             complement(20602..20682)
                     /gene="shoB"
                     /locus_tag="JQ356_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin ShoB"
                     /protein_id="HAY4621207.1"
                     /translation="MTDCRYLIKRVIKIIIAVLQLILLFL"
     gene            complement(21102..21482)
                     /locus_tag="JQ356_001042"
     CDS             complement(21102..21482)
                     /locus_tag="JQ356_001042"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HAY4621208.1"
                     /translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
                     GVVNMHVTLADERHYACATVIIES"
     gene            complement(21482..22213)
                     /gene="pdxJ"
                     /locus_tag="JQ356_001043"
     CDS             complement(21482..22213)
                     /gene="pdxJ"
                     /locus_tag="JQ356_001043"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HAY4621209.1"
                     /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
                     TEGGLDVAGQREKMRDACKRLTDAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
                     DAKTDAEQAQELVRIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
                     IGRAVMTGLKDAVAEMKRLMLEARG"
     gene            complement(22225..22953)
                     /gene="recO"
                     /locus_tag="JQ356_001044"
     CDS             complement(22225..22953)
                     /gene="recO"
                     /locus_tag="JQ356_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HAY4621210.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGEPVDD
                     TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTHYE"
     gene            complement(22965..23870)
                     /gene="era"
                     /locus_tag="JQ356_001045"
     CDS             complement(22965..23870)
                     /gene="era"
                     /locus_tag="JQ356_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HAY4621211.1"
                     /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
                     NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ECFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            complement(23867..24547)
                     /gene="rnc"
                     /locus_tag="JQ356_001046"
     CDS             complement(23867..24547)
                     /gene="rnc"
                     /locus_tag="JQ356_001046"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003848606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HAY4621212.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            complement(24820..25794)
                     /gene="lepB"
                     /locus_tag="JQ356_001047"
     CDS             complement(24820..25794)
                     /gene="lepB"
                     /locus_tag="JQ356_001047"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HAY4621213.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD
                     SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
                     VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
                     ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            complement(25810..27609)
                     /gene="lepA"
                     /locus_tag="JQ356_001048"
     CDS             complement(25810..27609)
                     /gene="lepA"
                     /locus_tag="JQ356_001048"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010434076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HAY4621214.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
                     CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
                     KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
                     VNNIDELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            complement(27807..28286)
                     /gene="rseC"
                     /locus_tag="JQ356_001049"
     CDS             complement(27807..28286)
                     /gene="rseC"
                     /locus_tag="JQ356_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HAY4621215.1"
                     /translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
                     DVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
     gene            complement(28283..29239)
                     /gene="rseB"
                     /locus_tag="JQ356_001050"
     CDS             complement(28283..29239)
                     /gene="rseB"
                     /locus_tag="JQ356_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HAY4621216.1"
                     /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
                     LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGDEISYFEPGLEPFTL
                     NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
                     KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
                     LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
     gene            complement(29239..29889)
                     /gene="rseA"
                     /locus_tag="JQ356_001051"
     CDS             complement(29239..29889)
                     /gene="rseA"
                     /locus_tag="JQ356_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HAY4621217.1"
                     /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
                     GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
                     GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            complement(29922..30497)
                     /gene="rpoE"
                     /locus_tag="JQ356_001052"
     CDS             complement(29922..30497)
                     /gene="rpoE"
                     /locus_tag="JQ356_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HAY4621218.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
                     DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            complement(30494..30649)
                     /gene="rseD"
                     /locus_tag="JQ356_001053"
     CDS             complement(30494..30649)
                     /gene="rseD"
                     /locus_tag="JQ356_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HAY4621219.1"
                     /translation="MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFG
                     LGRLYLG"
     gene            30905..>31437
                     /locus_tag="JQ356_001054"
     CDS             30905..>31437
                     /locus_tag="JQ356_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY4621220.1"
                     /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG
                     STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV
                     LFDTHVQPNGEESYHLTREGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERS
                     NAVDLIVSDKIGLPGTRR"
BASE COUNT         7529 a         8422 c         7924 g         7562 t
ORIGIN      
        1 cacgcaagca ccttaaaatc accatcatac actaaatcag taagttggca gcattaccaa
       61 atattacagt taatagggtt tagtgaacgt agttaaaaat aaaaggcatc acagtggtga
      121 ataatgccgc tttcggccag gccggattaa tcgccgtcaa ttcagcgcga gcagactcat
      181 attgcgcaac ctccccgagt cccgcggacg ccagcatcgc caccatcagg catttttctt
      241 tatgctgctg ttgtaaatcg ccatacagcg ataacaggtc aggttgtgaa acagcaaaga
      301 aatccgcctc aatactggtt ttcgccatct cttgcgccca ctgtttcatt tcactaaaca
      361 gttgctgtgc ggtttgctgt tcacccagca gtcgcagcgc cattccttgc cagaagagat
      421 aatcaaccgg ctgatcgttg taataactgt ggatgttaat ggtgcgatcg ccggtcgccg
      481 ccagacgtaa acaacgcatc gcttcagttt catcgccctg cgcgttggcg catatcgcct
      541 gccagaacca gatgtcgtta tcagtttgcc ccggtaaacg gccttcgctt aaattctccg
      601 gataatgcag cgcggcatga agcagttcgc tggcctgctg cggctctctg gcatcaagat
      661 gctgccaggc gcgtaataac tggttgagga taaactgact ggtgaccttc ccttccccgc
      721 cttcccacgg gtggaattta cgcgtggcga gaatgtccgc cgctttgtct gcctgacccg
      781 tgagatgcca caaattgagc agttctgcgg tcatgtcgtc gcgtttcagc gcaatttcca
      841 gattattttc cagacgcgcc agtcgtttct ccggtgtggc tccacttaac ttatcaagca
      901 aatcccgttc gaaaagcaga cgtgcatcct gcggcgcaag ctgataagca ttatcaagat
      961 aacgcgcggc cagctcataa tcgtgttgct tattccacgc atggatcgct aacccgcgcc
     1021 agccgtcggc aaactccggc gacatctcta cgcaacgttg ccaaaaggca atggctttgt
     1081 tgtagctacg tttgttgtag tagaagcagg ccagtaaatg gcgagcaaac cagcactctt
     1141 caatactctc cagcgccgcc acttcttcca gcgtattcgg gaaacggaca aactgcggga
     1201 agacatcaat ggcttttgcg accagttcgc cacgttcggc tttcggcagc aagctggctt
     1261 gcaggtaaag cggcagcgtg cgctggcagt ccagtgcgtt cagcatctct gccgccaggg
     1321 tgggcattcc ccagttaatc agttgcccgg cggtcatcag ggcgttaacg tcgcgtccct
     1381 gacacagacc gcgccactgc gcgagagctg attcgctacg accatcgaac cagttcagcc
     1441 accacagagt ggcgttcagc ggataatcgc gcagcagttt ctcgcgctgc acacgcgcgt
     1501 tgtcctgacg accacttaac accagcagca gattatgcag gcaaagcact tcctgattgg
     1561 ttgggcaggc gcgaagactt tgttggcaaa aatccagacc agcgtcgaag ttaccattac
     1621 gcgccgccag tcgtgccagg ccataatagc caccggcttt gctgttgccg ctccagaccg
     1681 cacgccagaa atcctcttcg gcttgttgat attgtccctg acgttcgtaa gcactggcgc
     1741 gaatcaaact cgcctgtccg cactgcggat ttttgttcag cgcatgtgcg cgtttcagag
     1801 cctgagtggc atacgccacc gcttgcggga aatcggcgcg gttatattcc agcatcgcca
     1861 gcgccaggtt acagcggtaa tccagcggat ccagcgccac gccgcgcagg tagtaatcga
     1921 acggtgaacg gctggcgtga tgatattgct ccagatgctg accgataaac caggcttcat
     1981 ctgtactggt aatgtcttgt gctgccagtg gcgctttggc gacgtccagc aacggcaact
     2041 cttgcggctg atgttcctga taactcagta caatattgcc gtcggcatcg gagagctcaa
     2101 tggtcagcct ttcaggattg ataccgtgca acacgccctg gatggcggtc gcaggcatca
     2161 gtgccacggc atcatcaagt aacgcgttgc atttgccgat ttcgcggatc accaggcggt
     2221 atccgttcaa cggagagatg gcatacagcc cccactcaat cccccgctta ctacgctgga
     2281 gttttatcac cgcatcgcgg gaggcatttt gcaccatgcc caaagaatga taaggcagga
     2341 aatactgctc aaaacgcttc tcttcgtaag catcaagcca ggtaaaatcg ggctggttat
     2401 cggcaaaaat accggtcatc agttcgatat acgggccgtt attgtcggtc agactcttat
     2461 cccacgcctg gccaaattca ctgtgtcccc aactccactg ttttttacct ggcgcaatat
     2521 ggtggttggc aacgtgcagc aaaccgccat cttcatcgtg acaccacgcg ccgacaaaat
     2581 cgtactgcga tttttcggcc atatatgagg ttgtaacagg cacattttta tagcaagaaa
     2641 tgtccactcc ggcggagtag tccactttgt agtaagtgcc ggtggcgatg gggaaagcgg
     2701 agacggcccg tttgccgtga tcaaacaccg cagtcacatc cggtgggaaa acgctctgat
     2761 gcccttcccc ccctttcact gccgggttgg cccaccacaa gaaatgacgc ggcgtggcgt
     2821 taccgttata gacgcggctg gcgatttcca gcgccgcccg gtcagggcgc agggtgaaac
     2881 ctgtcatcac ctgtaaacca tgcatcggct ccgtttcgcc tacccacacc gtctgtgcac
     2941 cgtcttcatg ggcttcgagg gtgaaatcaa cgggcataaa ggtggtcggg cgatgatgtt
     3001 gcggccagtt aaactcaatc ccaccggaaa tccacggccc cagcagcccc accagcgcag
     3061 gtttaatgac ttcattgtga taaacaaaat cgcgctgttt cactttatcc cacgcgcgat
     3121 gcacccgacc gcccagttcc ggcaggatca tcactttgat gtagtcgttt tccagccaca
     3181 ccgcctgcca ggatttcagg gttttctgct cgctcagcgt atcggtcacg ccgtagggat
     3241 aaaccgcgcc ggacgatccc tgataaacgc gattttccag gaacatggga tgtatatcct
     3301 gcggcccggt ttcataggtc gggatctcaa cgcgctcttg ccacactttt actggagtca
     3361 tggtgccctc aatattaaca agacatactg aattaaaaga tttgtggcag tgtattgaac
     3421 aatctggcaa tgttttcgcg gaataatcac gcaattaact aaacaaggtt tagtgaagat
     3481 gagagcctgc attaacaatc aacagattcg ccaccataac aaatgcgtga ttctggaact
     3541 gctgtaccgg caaaagcgcg ccaataaatc aacgctggcc cggctggcgc aaatttcgat
     3601 tccggcagtc agtaatattt tgcaggaact ggaaagcgaa aaacgggtgg tgaatattga
     3661 cgatgaaagc cagacgcgcg ggcatagtag cggtacatgg ctgattgcgc cggaaggtga
     3721 ctggacgctg tgcctgaacg tgacgcccac cagtattgag tgtcaggttg ctaatgcttg
     3781 tttaagtccg aaaggtgaat ttgagtattt acagattgat gcaccgacgc cgcaggcgct
     3841 gctgtccgaa atcgaaaaat gctggcatcg ccaccgtaaa ttgtggccgg accgcaccat
     3901 caatctggcg ctggcaatcc acggtcaggt tgatccggtg accggcgtgt cgcaaaccat
     3961 gccgcaagcg ccgtggacaa cgccggttga ggtgaagtat ctgctggaag agaagctggg
     4021 cattcgggtg atggtcgata atgactgcgt gatgctggcg ctggcggaga aatggcaaaa
     4081 taattcgcag gaacgggatt tctgcgtgat caacgttgat tacggcattg gctcgtcgtt
     4141 cgtgattaac gagcaaattt atcgcggcag tttgtatggt agcggacaaa ttggtcacac
     4201 catcgttaat ccggatggcg tcgtctgcga ctgtggacgt tacggctgcc tggaaaccgt
     4261 cgcctcgtta agtgcattaa aaaaacaggc gcgggtatgg ctaaaatcac aaccggttaa
     4321 tactcagctt gatcctgaaa aactgacaac cgcgcagtta atcgctgcct ggcagagtgg
     4381 agaaccgtgg atcaccagct gggttgatcg ctctgccaat gccattggtt tgagtctgta
     4441 taacttcctc aacatcctca atattaatca gatttggttg tacggtcgca gttgtgcctt
     4501 tggtgagaac tggcttaata ctattattcg ccagacagga tttaacccgt tcgaccgcga
     4561 cgaaggaccg agcgtgaaag cgacgcaaat tggcttcggg caattaagcc gcgcacaaca
     4621 ggtgctggga attggctatt tgtatgttga ggcgcagtta cgacagattt gatggcgcga
     4681 taacgtagaa aggcttcccg aaggaagcct tttttcaaca gattaaccgt ttcgcttatg
     4741 cgtaaaccgg gtaacgtgcg cagatgtcga gaactttacc tttgatgcgc tcgataacgg
     4801 cttcatcatt gatgctgtcc agcacgtcac acatccagcc agccagttct ttcgcttctg
     4861 cttctttgaa gccgcgacgc gtaattgccg gagtacccac gcgaataccg gaggtcacaa
     4921 acgggctctt cggatcgttc ggtacgctgt ttttgttgac ggtgatgtta gcacggccca
     4981 gagcggcgtc tgcttcttta ccggtcaggt ttttatcaac cagatcaacc aggaacaggt
     5041 ggttatcagt gccgccggaa accactttgt agccgcgctc gaggaacact tctaccatcg
     5101 ctttagcgtt tttcgcgacc tgctgctggt aagttttgaa ctcaggctcc atcgcttctt
     5161 tcagagcaac cgctttaccg gcgattacgt gcatcaacgg accgccctga ccaccaggga
     5221 aaacggcaga gttcagtttt ttgtacagct cttcgctacc acctttcgcc aggatcaggc
     5281 cgccgcgcgg acccgccagg gttttgtgag tggtggtagt aacaacgtga gcatgaggaa
     5341 ccgggttcgg gtagacgcca gcagcaacca ggcccgcaac gtgcgccata tcaacgaaca
     5401 ggtaagcacc gatgctgtca gcgatttcac gcattttcgc ccagtccacc acgccggaat
     5461 atgcagagaa accaccgata atcattttcg gcttgtgttc tttggcttgt ttttccagat
     5521 cggcgtagtc gatatgaccg gtagcatcga taccgtaagg aacgatgttg tacagtttac
     5581 cggagaagtt aaccggagaa ccgtgagtca ggtgaccgcc atgcgccagg ttcataccca
     5641 gaacggtatc acctggttcc agcagcgcgg tgtagaccgc aaagttagcc tgggagccgg
     5701 agtgcggctg gacgttagcg tagtcagcgc cgaacagttc tttcgcacga tcgatcgcca
     5761 gttgttcaac gatatcaaca tactcgcaac cgccgtagta gcgtttgccc ggataacctt
     5821 cagcatattt gttggtcagc tgagaaccct gcgcctgcat tacgcgcggg ctggtgtagt
     5881 tttcggaggc gatcagttcg atgtgctctt cctgacgtac tttttcctgc tccatagcct
     5941 gccacagttc ggcatcataa tcggcaatgt tcatttcacg ctttaacatc cgcatctcct
     6001 gactcagcta acaataaaat ttttggcctt tataggcggt cctgttggac aacggcgaac
     6061 agtataaccg aatcattgtg cgataacagg tcttgacaaa ggaatttacg caaacgatta
     6121 ccttcaggct acgcaaggct ttggagaata aagagcttgc aaccggaaac ggatttcttt
     6181 tcaggtttgt gatgcaaatt tttcacttca tcacattctt tctgaaaaac accaaagaac
     6241 catttacatt gcagggctat tttttataag atgcatttga aatacatcaa ttaagatgca
     6301 aaaaaaggaa gaccatatgc ttgacgctca aaccatcgct acagtaaaag ccaccatccc
     6361 tttactggtg gaaacggggc caaagttaac cgcccatttc tacgaccgta tgtttactca
     6421 taacccagaa ctcaaagaaa tttttaacat gagtaaccag cgtaatggcg atcaacgtga
     6481 agccctgttt aacgctattg ccgcctacgc cagtaatatt gaaaacctgc ctgcgctgct
     6541 gccagcggta gaaaaaatcg cgcagaagca caccagcttc cagatcaaac cggaacagta
     6601 caacatcgtc ggtgaacacc tgttggcaac gctggacgaa atgttcagcc cggggcagga
     6661 agtgctggac gcgtggggta aagcctatgg tgtactggct aatgtattta tcaatcgcga
     6721 ggcggaaatc tataacgaaa acgccagcaa agccggtggt tgggaaggta ctcgcgattt
     6781 ccgcattgtg gctaaaacac cgcgcagcgc gcttatcacc agcttcgaac tggagccggt
     6841 cgacggtggc gcagtggcag aataccgtcc ggggcaatat ctcggcgtct ggctgaagcc
     6901 ggaaggtttc ccgcatcagg aaattcgtca gtactctttg actcgcaaac cggatggcaa
     6961 aggctatcgt attgcggtga aacgcgaaga gggtgggcag gtatccaact ggttgcacaa
     7021 tcacgccaat gttggcgatg tcgtgaaact ggtcgctccg gcaggtgatt tctttatggc
     7081 tgtcgcagat gacacaccag tgacgttaat ctcttccggt gttggtcaaa cgccaatgct
     7141 ggcaatgctc gacacgctgg caaaagcagg ccacacagca caagtgaact ggttccatgc
     7201 ggcagaaaat ggcgatgttc acgcctttgc cgatgaagtt aaggaactgg ggcagtcact
     7261 gccgcgcttt accgcgcaca cctggtatcg tcagccgagc gaagccgatc gcgctaaagg
     7321 tcagtttgat agcgaaggtc tgatggattt gagcaaactg gaaggtgcgt tcagcgatcc
     7381 gacaatgcag ttctatctct gcggcccggt tggcttcatg cagtttaccg cgaaacagtt
     7441 agtggatctg ggcgtgaagc aggaaaacat ttattacgaa tgctttggcc cgcataaggt
     7501 gctgtaattt gatgttgccg gatggaaaca tccggcaacc cttgacgcgg tttaaattgc
     7561 cgcgtcgtcc tcttcaccgg tacggatgcg aatgacccgt gccacgtcaa agacgaagat
     7621 tttaccgtca ccgattttgc cggtttgcgc cgtgcgaata atggtatcga cacaggtatc
     7681 gacaatgtcg tccggtacga caatctcaat tttcactttc ggcagaaaat ccaccatata
     7741 ctccgcgccg cggtacagct cggtatggcc tttctggcga ccaaagcctt tcacttcggt
     7801 caccgtcatg ccggtaatac cgacttcggc cagtgcttcg cggacatcgt ccagcttgaa
     7861 gggttttata atcgcatcaa tctttttcat gctattcctt gaaaaggtcg cctgtctttt
     7921 gatctgctaa acgtaacaca taacgccaat tcattccttg aaatcgtttg catccagctc
     7981 gtgtcgggaa agcagtttat aaaattctgt ccggttgcgc cccgccattc tcgccgcgtg
     8041 ggtgacgttg cctttggtaa tttgcagcag cttacgcaaa tagttgagtt caaactgatt
     8101 acgtgcctca acaaaggttg gcagcgccgt gttttcaccc tccagcgcct gctctactaa
     8161 tgcatcgcta ataaccggag atgaggtcag cgccacgcac tgttcaatca cgttgaccaa
     8221 ctggcgcaca ttacccggcc agctagcggt catcaggcgt ttcatcgcat cagtggagaa
     8281 cgcgcggaca aacggtttat gtcgctctgc cgcctggcgc aacaggtgat ttgccagaag
     8341 cggaatgtct tctgtgcgct ctgccagagc cggaattttc aggctgacaa cgttgaggcg
     8401 gtaatagaga tcttcgcgga attccccgcg cgccatcgct tttggcagat cacggtgagt
     8461 ggcagaaata atccgcacat tgatatcaat atcgcggtta ctgcccagcg ggcgcacttt
     8521 acgctcctgc aacacgcgca gcagtttgac ctgtaacggc gcaggcatat cgccaatttc
     8581 atcgagaaat agcgttccgc cttccgccgc ctggaataaa ccttcgcgat tgctgacagc
     8641 gccagtaaac gcgccacgcg catgaccaaa cagctccgac tccagcaatt gctcgggcaa
     8701 tgcgccacag ttaatagcaa taaatggttt gctgttgcgc gggctggcgt tgtggatagc
     8761 ctgggcgaaa atctctttcc cggtgccgct ctgaccgtta atcaaaacgc tgacgtctga
     8821 ttgcgccacc agccgcgcct gttccagcaa acgcagcatc agcgggctgc gggtgacaat
     8881 tgcctcgcgc cagcgttcat cggtggctgg cgcggattgc tccagcgcat cgtcaattgc
     8941 ctgatatagc gcgtctttgt cgacaggctt ggtgaggaaa ctaaaaacgc cctgctgtgt
     9001 tgcagcaacg gcatcgggga tagaaccatg cgcagtaaga ataattactg gcattcccgg
     9061 ctgcactttc tggatttcag caaatagctg cataccgtcc atttcatcca tccgcaggtc
     9121 gctgataact aaatctactt tttcgcgatt cagtacccgt aatccttcag cgccactttc
     9181 cgccgtgacc acactgtagc cttcgctggt caggcgcagg ccaagcagtt tcagcaatcc
     9241 cggatcgtca tcgaccaata ataaatgcgc aggtttatgg ctcatcagga gtgacctcat
     9301 gggtggatgg cgcgggcttt tcactctcgt gcggcgtatc cggcgagaaa tttccagccg
     9361 gtttgcgggt cgagagctgg cgttcaatat cggtcaggtt ttccagcttg cgggtggtga
     9421 gttccagttg ctgctgtaga acgtgatgtt gctggcgcaa tgtatccagc tcgctgtcgc
     9481 tggactgctg gagtttactg taacgttggc gctcttccgc cagttgcagt tgcagcgcct
     9541 gaccgtcgcg ccagagttga tacagtgggc gaacctgtgc cgggatctcg gtacttaacg
     9601 cttcaatacg cgcgaccagc tggcggcgct catacggcgt aattttggcg tcggcgagca
     9661 aaatcccttg tttaaaggta ttttgccagc agccgtcgtc atattggcga gcttgctgac
     9721 gcgactgcgc aggcattaaa cgatcagcac aatccatcgc ccgcagccag taaagcggat
     9781 tggtttcggt tgatttacct tgcagcgccc agatgtcgct acattcagta gaaagatagt
     9841 cagccagttg ataaaccgga attttttctt ctgctggcgt atcaatggct ggcttattgt
     9901 gattctgcac gcaacccagc aatgccagac atggcagccc tgccagccac agccgtcggg
     9961 gcaataatcg ttgaaaaatg tgtcgcatat tcaccagact taaagcctat cccagtgggc
    10021 gtaattgttg cagacagtct ggacatggac agcgcggaga aaccggagcg tacatatcgt
    10081 acgtgaagat ttcgagcact gcccggagcc gaactgacaa ataaaatagc ctgataggat
    10141 aggctgttag cattatttcg tgtttttcga cgacggtaat tcaatgcgga aacaaacgtc
    10201 ttgcccgctc tcgtcgacca gatacagttc cccttgcata cggcgaatac aatccctggc
    10261 aatgcttaat cccagaccgc tgcccttcac cgcccctttt cgctggtggc ttccctgaaa
    10321 aaagggttcg aagatcatgg cgcgttcctc ttgcggaatg ggcgtgcctg tattgatgac
    10381 atcaatataa acccgcgcac catgtgaact gctgcgaagg caaatgttac cggattcagc
    10441 cccgtagtgc accgcattgg agtaaagatt atccagtacg ctcatcagca gcattggctc
    10501 cgccaggcaa gctgttgctt tgagatcgac gtcggtatgc atcattttag cccgtgcggg
    10561 caggctatga gcagaaacca ctgtctccac cagcggtgct aattcaacat tctccagttc
    10621 caccgcactg tccgcctgtt tacggttgta atcaagcagt tgttcgatca gtttttgcaa
    10681 attgcggctg ctgctatcaa gaatgctcac cacctctttt tgctctggcg taagcggccc
    10741 gacaacctgg tcagccagta attcagtgcc ctcgcgcata ctcgccagtg gcgtttttaa
    10801 ttcatgagat aaatgtctta aaaattgatg gcgttgggat tccagccatg acaggcgctc
    10861 acttaaccaa agaatacgtt gcccaaccga gcgtaactcg ctcggtccac tgaacgaaac
    10921 gctattgccc agagaacgcc cttcccccag acggttgatc atgcgctcga tatttttcac
    10981 cggcccgata atcatccgcg tgaaaagtag caccatcacc agactcacca gaaatagcac
    11041 cagcgattgc caaccaaaat attgcccacg ttcggcgatt tcacgctgaa gttgctgccc
    11101 acgagagaac accactgtgc gcgtggcctg caccatttcg gtattggcac tggcaaaggc
    11161 ttcaagacgc gcggcggcgg cagcatcggg accactgttg ttacactgaa gttgggccag
    11221 attgttcaaa tcctgacgca atgcctggta aagtttatcg tctggcagta cgcctgcgtg
    11281 ggcatcgagc atttcgctgt aacgcttgcg ctggctttga taaaccttcg caagcgtagg
    11341 gtcgtccagc acgcaatact gacggtagct acgctccatc tccagcgccg cgttggtcat
    11401 cgcttcacta cgccgggcat caataagcgt agtgcggtta accagcgccg cctgatcgct
    11461 aagcgcattc aggctttgcc aggcttgcca tgccagcacc aacaggggta gtagaattag
    11521 caaaaatgcc agcattacca gttgtcgtaa tgagcgggga aaaacgggcc agcgtttcaa
    11581 ggtgttactc tcgtcagacg cgaatagcct gatgctaacc gaggggaagt tcagatacaa
    11641 caaagccggg aattacccgg ctttgttatg gaataaggcg gtgcctaact cgacgtttcg
    11701 cccgatggtt gatatagcta cgctgatatc agaagttgga cggcaggcac cttgttgtgc
    11761 gtcattcgaa ttttatgtag cacgtcccga aggggctgac ataagtcggt gaatgagcca
    11821 ctgcttacta ttatgcagta actgtgccaa taaagaaaat agtttggtaa cgtactgatt
    11881 atacgttgct ttgagggatt tatggcttct tcgctatttg aatgtaaatc agccactgtg
    11941 tcgctaaaaa gagacagctt aagataaact tattagatta caataaaatc aaccacttaa
    12001 gtgtcaccag aaagcgacac ggtaaaccac ccattgtcgt gatttacaga cacaaaaaag
    12061 ctcccggagt tgggagctta tgatagtggt tggtgcttaa tgccgcatcc gggctgcaaa
    12121 accaatgaac tgatgaatta ccccaactgc ttacgcgcat tgcggaaaat gcgcatccat
    12181 gggccatcct cgccccagtt ttccggatgc caggagttgc tgacagtacg gaaaacacgt
    12241 tccgggtgcg gcatcataat ggtgactcga ccactttcag tcgtgactgc cgtaataccg
    12301 ttcggtgaac cgttcgggtt ggccgggtag gtctcagtga ctttgccgaa gttatcgaca
    12361 tagcgcagtg ccaccagccc tttgctttcc agtgccgcca gatgcgccgc atcacgcact
    12421 tccacgcgcc cttcaccatg agagacagca atcggcattt gcgagcccac catcccctgc
    12481 aacaacagag acgggctttg ggttacttca accaggctga aacgcgcttc aaagcgatcg
    12541 gaggtattgc gcacaaaacg tggccacaac tcactacctg ggatcagttc gcgcaggtta
    12601 gacatcatct ggcaaccgtt acataccccc agcgccagcg tttgcggacg gtggaagaag
    12661 gttgcaaact catcgcgtac acggtcattg aacaggattg acttcgccca accttcaccg
    12721 gcacccagca catcaccgta ggagaaacca ccgcacgcga ccagggcgtg gaaatcttcc
    12781 aggcccgtgc gtccggtcag caggtcactc atatgcacgt cgatagcatc aaagcctgca
    12841 cggtggaaag ctgccgccat ttcaacatgc gagttcacgc cctgctcacg cagtacggca
    12901 actttcggac gtgcgccagt ggcaatatac ggtgctgcca catcttcgtt gatatcgaac
    12961 gacagtttta cattcaggcc cggatcggcg tcgttagatt tcgcctgatg ctcctgatcg
    13021 gcacactccg ggttgtcacg caggcgctgc atctgccagg tagtttctgc ccaccagaca
    13081 cgcaacgtgg tgcggctttc gctgaataca gtctgcccgt tggcggtaat cacaaaacgg
    13141 tcaccggaaa ccgcctgccc tacataatgg acacaatcag caagcccatg ctgtgccagt
    13201 acggactcga ccgcttcacg gtcagcggca cgaacctgaa tcaccgcacc cagttcttcg
    13261 ttaaacaacg ccgccaggcg atcgtcgccc agagaggcaa tatccgcgtt aatgccgcaa
    13321 tgaccagcaa aggccatttc cgccagcgtt accagcaggc cgccatcaga gcggtcgtgg
    13381 tatgcgagca gcttacgctg tgcaaccagc gcctgaatcg cgtcatagaa gcctttcagt
    13441 tgcgcgacgt cgcgtacatc tgccggtttg tcgccaagct gacgataaac ctgcgccagc
    13501 gccgttgcgc ccagcgcgtt attgcctttg cccaaatcaa tcagcaatag tgcgttatct
    13561 tcggtagaaa gctgtggcgt gatggtgtga cgcacatctt ccacgcgggc aaatgcagaa
    13621 atcaccagcg acagcggcga cgtcatttcg cgctcttcgt taccttcctg ccagcgggtt
    13681 ttcatcgaca tagagtcttt acccaccggg atcgtcaggc ccagcgccgg acaaagctct
    13741 tcgcccacgg ctttaacggc ttcatacagg cccgcatctt caccagggtg gcctgccgcc
    13801 gccatccagt tggcggaaag tttaatgcgt ttgatatcgc caatctgtgt tgcggcaata
    13861 ttggttaacg cttcaccgac cgccagacgg gcagaggcgg cgaaatccag cagcgcaacc
    13921 ggcgcacgct cgccaatcgc catcgcttca ccgtagtagc tgtcgaggct ggcggtagtg
    13981 accgcgcagt tagcgaccgg cacctgccac ggacccacca tctgatcgcg cgctaccatg
    14041 ccagttacgc tgcggtcacc gatggtcacc aggaaagttt tctccgccac ggtcggcaga
    14101 tgcagtatgc gtttcaccgc gtctgcaatg gtgatccctt cacggaccag cgcatcgccc
    14161 ttcgctttca gcgtttgtac atcgcgggtc atcttcggcg ttttaccaag caggacgtcc
    14221 agcggcagat cgatcggctg attatcaaaa tgacgatcgt gtagagaaag atgcagttct
    14281 tcggtcgctt caccaatcac cgcgtagggt gcgcgctcac gcttacacag ttcgtcaaac
    14341 agcggtaatt gatcggcagc aaccgccagc acgtagcgtt cctgggattc gttacaccag
    14401 atttccagcg ggctcatgcc tggctcgtcg ctcagaatgt cgcgcagttc aaatttaccg
    14461 ccacgcccgc cgtcgctcac cagttccggc atagcgttag aaagaccgcc tgcgccaacg
    14521 tcgtggataa acagtattgg gttggcatca ccaagctgcc agcaacggtc aatcacttcc
    14581 tggcagcgac gctccatctc cgggttgtcg cgctgtacgg aagcaaagtc gaggtcggca
    14641 tcagactgac cagacgccat ggaagacgcc gcgccgccgc caagaccgat gttcattgcc
    14701 gggccgccga gaacgaccag cttcgcgcca acgttgatct cgcctttttg tacgtgatcg
    14761 gcgcgaatgt tgccgatccc gcccgccagc atgatcggtt tgtgataacc gcgcagctct
    14821 tcgccgttgt ggctgttcac tttttcttca taagtacgga agtagccgtt cagtgccgga
    14881 cgaccaaatt cgttgttaaa cgccgcaccg cccagcgggc cttcggtcat gatgtccagc
    14941 gcggtgacaa tgcgctcagg cttaccgaaa tcttcttccc acggctgttc gaagccaaga
    15001 attcgcaggt tggaaacgga gaaaccaacc aaacccgctt tcggcttcgc gccgcgcccg
    15061 gtggcacctt catcgcggat ttcaccgccg gaaccggtcg ccgcgcccgg ccacggagaa
    15121 atcgccgtcg ggtggttgtg agtttcgact ttcatcagaa tatgcgccgg ttcctgatgg
    15181 aaatcatagc ggcccgtttc gtggtcagca aagtagcggc ccacttcaga accttccatt
    15241 acggcggcgt tatctttata agcagagaga acgtgatctg gcgtggtttc gaaagtattt
    15301 ttgatcatcc tgaacagcga tttcggctgt tgttcaccgt cgataatcca gtcggcgtta
    15361 aaaattttgt ggcggcagtg ctcagagttc gcctgagcga acatatacag ctcgatgtcg
    15421 ttcgggttac gaccaagctt tgtgaaagca tcctgcagat agtcaatttc atcttccgcc
    15481 agagccaggc caagacgcag gttagcgtcg atcagcgcct gacggccctg ccccagcaaa
    15541 tcaacgcttg tgaccggagt cggttgatgg tgggcaaaca actgctctgc atcatctaaa
    15601 tcaaaaaaga cagtttccat catgcggtcg tgcagttcag cggtaacctg ctgccattgt
    15661 tcattggtca gcgtaccggc ttctatatag taagcaacgc cgcgctcaag gcggtttacc
    15721 tgttgtagcc cgcagttatg ggcaatatcg gtcgctttcg aagaccaggg agagatggtg
    15781 ccaggacgcg gggtcaccag caggagtttg ccttgcgggg cgtggctggc gagtgccgga
    15841 ccatatttca gcaggcgttc aagttgtgcg tgctcatcat cgtttaacgg cgcattgagg
    15901 tcagcaaaat ggacatactc ggcgtaaata ttgtgaaccg ggagcctggc agcctgaaaa
    15961 cgtgccagca gtttgttgat tcggaatgcc gacagtgcag gcgaaccacg cagaatttcc
    16021 atcataagtc tctcgtcttc taagctttcg gtgtacccaa gggggggggg aaacgggcgt
    16081 cattataaag aatctgatgc gctgacgaaa ccgtttgcgt ggaaataaaa tcaccatcgt
    16141 gaattagcaa cgcgtgccgc caatggctgt aataagttgc catctggcgc aggtttacgc
    16201 aaaatgccgc tcatttatga gtaaaccttt cactattatt acgttttttc aagctgggac
    16261 gcgcacgaca cagagaatta actaattgaa aaaattaaag attaattatc tgttcatcgg
    16321 cattctggca ctgctgctcg cggtcgctct ctggccatcc attccctggt ttggtaaagc
    16381 cgacaaccgt atcgccgcca ttcaagcgcg gggagagttg cgtgtgagca ccattcatac
    16441 tcccctgact tataacgaaa tcaacgggaa accttttggc ctggattacg aactggcgaa
    16501 acagtttgcc gattacctcg gcgtaaaact gaaagtgacc gtgcggcaga atatcagcca
    16561 gctgtttgac gaccttgata atggtaacgc cgacctgctg gcggcaggac tggtctataa
    16621 cagtgagcgg gtaaaaaatt atcagcctgg ccctacctat tattccgtgt cacaacaact
    16681 ggtttataaa gtgggtcagt atcgcccacg tacgctgtgc aacctgacgg cggagcaact
    16741 caccgttgca ccgggtcatg tggtggttaa cgatctccag accctgaaag aaacaaaatt
    16801 cccggaatta agctggaagg tagacgacaa aaaaggctct gcggaattaa tggaagatgt
    16861 catcgaagga aaactcgatt acaccattgc tgattctgtc gccatcagcc tgtttcagcg
    16921 cgttcacccg gagctcgccg tagcgctcga tatcaccgat gaacaaccgg tgacttggtt
    16981 tagcccgtta gatggcgata ataccctttc cgccgccctg ctcgacttct tcaacgaaat
    17041 gaatgaagac ggtacgctgg cacgcattga agagaaatac ctggggcatg gcgatgattt
    17101 tgattacgtc gatacgcgca catttttacg cgccgtcgat gcggtactgc cgcagttaaa
    17161 gcccctgttt gagaaatacg ccgaagaaat tgactggcgt ttgctggccg ctattgctta
    17221 tcaggaatcg cactgggatg cacaggccac ttcaccgacg ggtgtgcgcg gcatgatgat
    17281 gttaaccaaa aataccgcgc aaagcctcgg cattacggat cgtaccgatg ccgaacagag
    17341 catcagcggt ggcgtgcgtt atttgcagga tatgatgagt aaagtgccgg aaagtgtgcc
    17401 ggagaacgag cggatctggt ttgccctcgc tgcgtacaat atgggctatg cgcatatgct
    17461 ggatgcccgc gccctgacgg caaaaaccaa agggaatcct gacagttggg ctgacgtaaa
    17521 acagcgtctg cctttactta gccagaaacc ctattacagc aagctgactt acggctatgc
    17581 tcgtggacat gaagcctacg cttatgtcga aaatattcgt aagtatcaaa ttagcctggt
    17641 gggttatctg caagagaaag agaagcaggc tacagaagcg gcgatgcaac tggcgcagga
    17701 ttatccggcg gtatcgccta cggagttggg caaagagaaa tttccttttc tctcgtttct
    17761 ttcccagtcg tcatcaaact atttgaccca ttctccctct ctgctgtttt ccaggaaagg
    17821 gagtgaagag aaacaaaatt aatccgtcga ggattgcgct tttttctgcg ctttaatttc
    17881 ctggcggcgc atgcgaaaga agtcactgag caacgccgcg cactcatccg ccagtattcc
    17941 ttccgtaatt tccactcggt gattcatacc cggatgatgc agcacatcca ttaaagatcc
    18001 cgcagcgcca gttttcgcgt cacgcgcacc aaagaccacg cgaccaatgc gactgtggat
    18061 catcgctccg gcacacatta cacatggttc aagcgtgaca tacaacgtgg cgtcgatcag
    18121 acgataattt tgcatcacca gaccaccctg ccgcagggcc atgatttctg catgtgcggt
    18181 gggatcatgg cgaccaatcg ggcggttcca accttcgccg attacccgat tgttatgcac
    18241 taataccgcg ccgaccggca cttcccgctc atcccaggca cgtttcgcca gcgtcagcgc
    18301 gtgacgcatc cagtattcgt ggctaaattc gacttcagac aaaaagaaaa ctccggttat
    18361 aaaagcgcgg cgcattatac acggacgcta tgctttactc tattccagtt gctggagttc
    18421 accgcgcggg gttactcgcc aacgatgctg acagaaataa agcagcggat tgtcctgatt
    18481 actgtcgcta tagccactgt acagccgcag cggagtgccg attttgcgct ccagttgtgc
    18541 gaccttttca tgtcccagac aacgcatcgt caatacccaa ccaccatagc cacgctgaat
    18601 ttggctggcg ataagattaa cccgcggcag ccagggctta tcgaaataaa ccgcttcaac
    18661 cagcggctgc ggagagccgg taatcaacca gatatcagca tcggaactta acaggtaggt
    18721 ggttaatcgc tcctgaacca gcggaaaggc ggtaacattg tcgcgaaacc agcgcacgaa
    18781 atcggcctgc aacgtctgta aacgtgcttc gctgtgacca aaagtgcacc cccacagaag
    18841 cagactcatc ggccagcgtg ccgcacgacc ttttatcaat aacgcaatgg ctataatcgg
    18901 taacaacggc aggacaagta acgcattcag cggttggcga cgtagtaaat agcgcagaaa
    18961 actgccgaac atatcctgct gatgcaatgt tccatctaag tcaaaaaaca ccacacgacg
    19021 ctcgtgagtt gccaaaccat actcctctgg actgaaacat cctgattaat tttcgctact
    19081 acatagccta acagatagat catcactttt ccggcaacaa tcgaccgcat catggctaac
    19141 tggaattttt aattcatggc aattagcggc aatggaatat aaaattcact cgcgtgtgtc
    19201 tcatattgcc tgttgtcgcc actatttcat cgcgaggaaa gatatgaacg gcttacttcg
    19261 tatccgtcag cgttaccagg ggcttgccca gagtgataaa aaactggcgg attatctgct
    19321 gctacaacct gatacggcgc gccatttaag ctctcagcaa ctggccaacg aagccggagt
    19381 cagtcagtcc agcgtcgtga agttcgcgca aaaactcggc tataaaggtt ttccggcgct
    19441 taagttggcg ttgagtgaag cgctggcaag ccagccggaa tcgccctccg tgcccattca
    19501 taaccaaatc cgcggtgatg atccgttacg gctggtcggc gaaaaactga ttaaagaaaa
    19561 tactgccgct atgtacgcaa cgctaaacgt taatagtgaa gagaaactgc atgaatgcgt
    19621 aacaatgttg cgctctgcgc ggcggataat tctgaccggt attggcgctt cgggtctggt
    19681 ggcgcaaaac tttgcctgga agctgatgaa gattggcttc aatgctgccg cagtgcgcga
    19741 tatgcatgcg ctactcgcaa cagtacaggc gtcgtcccct gacgatctgt tattagccat
    19801 ttcctacacc ggtgtacgac gcgagttaaa cctggcggca gatgagatgc tgcgagtggg
    19861 cggaaaagtg ctggcgatta ccggctttac tccgaatgcc ctgcaacagc gtgcttctca
    19921 ttgcctgtat accattgccg aagaacaagc gacaaacagt gcttcaatct ctgcttgtca
    19981 cgctcaggga atgttaacgg atttgctgtt cattgcgctg attcagcagg atctggaact
    20041 ggcaccagaa cgtattcgtc atagtgaagc gctggtgaaa aaactggtct gagtaaagaa
    20101 tgcgcgtata atgcccgccc ggtttgtgtt gttttgagag tttccttatg gcgttgttaa
    20161 tcactaaaaa atgcatcaat tgtgatatgt gtgaacccga atgcccgaat gaggcgattt
    20221 caatgggaga tcatatctac gagattaaca gcgataagtg taccgaatgc gtagggcact
    20281 acgagacacc aacctgccag aaggtgtgcc cgatccccaa tactattgtg aaagatccgg
    20341 cgcatgtcga gacagaagaa cagttgtggg ataaatttgt gctgatgcac cacgcggata
    20401 aaatttaata ttctactctg gaagtagagt attaattata ttactgggaa gccttaacgc
    20461 cattatattt atttaattga tgacattagc ataatcattc actaagttaa tttatatagt
    20521 atctgccaag acacttattt atagttatta aaggcgcgtc cgattggttc accggacgca
    20581 ccttaagtac gtttccttgt gttataagaa cagaaggatc agctgtaaaa cagcaatgat
    20641 gattttgatg acccgtttaa tcaggtatcg gcaatcagtc attcgttttt ccttaaacaa
    20701 ggaatgcagc cgttcagatt agcccttaca tctccccaaa actgaacgtg cgagttattg
    20761 agggtgcatg ctgcactcca caccagagct ttgacgacac cactcgtttc aatgggggaa
    20821 ttctgtggca tggtgtaaag cacagcaaaa tcttcaataa cgaagccaat tttaatgtac
    20881 ttacgaattg gcggtcacgt taatctttcc atcaatattg ctttcttcgt aaaggctcga
    20941 gtttttatgc taaagattgc aagttgcttg taaaagataa gtacactgat ccataatcgc
    21001 tgttgttgag ggtgcatgct gcacaaaatt aaagttaaaa agtaaaaccc ccgttcctta
    21061 ccagttcggg ggttttactt tttaaagaga acggtattat tttaactttc aataattacc
    21121 gtggcacaag catagtggcg ttcatctgcc agcgttacat gcatatttac aacgccgagc
    21181 ttttccgcca gttttaatgc ctcaccccat agccgtagcc gtggtttgcc gagctcatca
    21241 ttgaatactt caaattgatt aaacgccaga ccattgcgga tcccggtgcc aaacgctttt
    21301 gctgcggctt ctttcacagc aaaacgcttc gccagaaaac gcaccggctg gtggtgcgtt
    21361 ttccagattg cccattcgtt atcgcttaat acgcggcgtg ctaggcgctc accggatcgg
    21421 gcgatcactg cttctatgcg agcgatctct acgatatccg tgcctaaacc taatattgcc
    21481 attagccacg cgcttccagc atcagacgct tcatttctgc caccgcatct ttcagtccgg
    21541 tcatcactgc acggccaata atggcatgac cgatattcag ttcatgcatc tcagggatgg
    21601 cggcaatggc tttcacgttg tgataggtca gaccgtgtcc ggcgttaact ttcagaccga
    21661 gactagcggc aaaggtcgcg gctttggcga tacgcaccag ctcttgcgcc tgttcggcgt
    21721 cagttttggc atcagcatag caaccggtgt ggatctcgat aaacggtgcg ccaacctctg
    21781 ccgcagcttt gatctgctct tcatcggcgt cgataaagag agaaacctga atcccggcat
    21841 ctgtcagacg tttgcaggca tcgcgcattt tttcacgctg ccctgcaacg tccaggccgc
    21901 cttcggttgt tacttcctga cgcttttccg gtaccaggca gcaaaaatgt ggcttcgtct
    21961 caacggcgat cgccagcatc tcttcggtca ctgccatctc cagattcatt cgggtatcca
    22021 gcgtctgccg caggatgcgc acatcgcggt cagtaatgtg gcggcgatct tcacgtaaat
    22081 gcacggtaat gccgtccgct cccgcctgct cggcaataaa cgccgcctgc accggatccg
    22141 ggtaagcagt accgcgtgcg ttacgcagcg ttgcaatatg gtcaatgttg acgcctaaca
    22201 gtaattcagc catgacaatc ctcatcattc ataatgtgtt ttcaccgttc gcttaggcat
    22261 aaactgccgg aacagttccc tgctctttaa tggtttaccg ccaagatacg gcttaagcgc
    22321 catgcgggta aagcgtttcg cggcgcgtag tgtgtctgcg tcaggaaatt cccgcgcgtt
    22381 taacgctttt aactgccttc cggtgaacgt tttattgtcg ataacgacgc ttgcgataaa
    22441 ccctttttct tcgcgataac gatacgtcat ggtgtcatct accggctcgc cgctacccgc
    22501 gcaataggta aaattgacgc catagcccag atgcccgagc aatgccagtt caaagcggcg
    22561 cagcgcgggt tctggcgtac cagtggcacc tgcaagagac tgaatgcagt gcaaataatc
    22621 gaaaaagagt tcagagaagc gcgtctcgta ttccagtacg cgggagagaa gttcgttgat
    22681 gtacagaccg ctgtaaagcg tgataccgct taatggcagc gccagcgaga cagcttcagc
    22741 actgcgcagc gttttgactt cgccacgccc gccgaaacgt agcaagagag gggtgaaagg
    22801 ctgtaatgca cctttcagag tagagcgttt agagcgtgcg cctttggcaa ccagacgcac
    22861 gcgacccgat tcctccgtga agacgtccag catcaggctg gtttcgctcc acgggcgact
    22921 atgcaggaca aatgcgcgct gccagccttc catcggagtg actcttaaag atcgtcaacg
    22981 taaccgagac tgcgcagtgc gcgttcgtcg tcggcccaac cggatttcac ttttacccac
    23041 agttcaaggt ggacaggcgc ttcgaacatt tcctgcatgt ctttacgcgc ttcaatcccg
    23101 atggttttga tcttggcccc tttgttgcca ataaccatct tcttctgccc ttcacgctca
    23161 acgagaatca aaccattgat gtcataacca ccgcgttcgt tagagacgaa acattcgatc
    23221 tccacggtca cggagtacgg cagttcagcg ccgaggaaac gcatcagttt ttcgcggatg
    23281 atttcagacg ccataaaacg ctgtgagcga tcggtgatgt aatcttccgg gaagtgatgg
    23341 gtcgcttcag gcagatgctt acgcacgatt gctgcgatag tgtcgacatt cagcccggtt
    23401 tcagcagaga tcggcacgat atcgaggaag ttcatctgac ttgccaggaa ctgtaagtgc
    23461 ggcagcagat cggctttttc ctgcacgtta tccactttgt tcaccgcgag gatcaccggc
    23521 gctttgccat cgcgcagttt gttgagcacc atttcgtcgt ccggcgtcca gcgggtgcct
    23581 tcaacgacaa aaatcaccag ctcaacgtcg ccaatagagc tgctcgccgc tttgttcatc
    23641 aggcggttaa tagcgcgttt ttcttccata tgcaggccag gggtatcaac gtagatcgcc
    23701 tgatacgcgc cttcagtatg gatccccaca atgcggtgac gagttgtttg cgctttgcgg
    23761 gaggtgatgg agatcttctg ccccagcagt ttgttcaaca atgtggattt gccaacgttc
    23821 ggacgtccga cgatggcaat aaatccgcag taacttttat cgatgctcat tccagctcca
    23881 gttttttcaa cgcctgttcg gcggcagcct gctcagcctt acgacggctt gaacctgtgc
    23941 caaccaccgg ttcactcagg ccgctgacct ggcagtggat agtaaattcc tgatcgtgcg
    24001 cttcgccacg tacctggact accagataag tcggcagcgg cagatggcga ccctgcaaat
    24061 attcttgcaa gcgcgttttc ggatcttttt gtttatcgcc tgggctaatt tcgtccaaac
    24121 gagtttgata ccagttgagg attaatttct cgacggtttg aatatcactg tcgaggaata
    24181 cgccaccaat taatgcttcg acggtatcgg cgagaattga ctcacgacga aatccaccgc
    24241 ttttaagttc accaggccct aaacgtaagc actcgcctaa ctcaaattcg cgcgccagtt
    24301 ccgccagcgt attgccacgg accagcgtgg cgcgcatccg gctcatatcg ccttcatcca
    24361 cacgagggaa acggtgataa agcgcattgg cgataacgta gctcagaata gagtcgccta
    24421 aaaattctaa acgctcgtta tgtttgctgc tggcactacg atgagttaat gcctgctgca
    24481 acagttcctg atgattaaaa gtgtagccca gcttccgttg aagccgatta attacgatgg
    24541 ggttcatgcg ataccaataa ataaatgcgt caacaattca gcacacgaaa cagacctgat
    24601 atacatggct ctgctaactg cttcgctgca gtttcagttt accggtatat ggggaccaac
    24661 gctgtttcgt gtgccgtggc aacctggagg tgccaacctt aaacttcggg ggaatattct
    24721 atacacaacg acgggggatg tcgttagcca cgggagattt atctcataaa taattcacgt
    24781 tgtcgccata acggcgacaa cgtgaacgaa gatgggctat taatggatgc cgccaatgcg
    24841 acttaagcgc acacctgtcg gccattcgcc ttcttgctta tcgaaactca tccagatagc
    24901 cgttgcccga ccgaccagat tcgcttcagg cacaaaaccc cagtaacggc tgtccgcgct
    24961 gttgtcgcgg ttgtcgccca tcatgaagta ttgtcccggc ggaacaatcc aggttgccag
    25021 ttgttgccct ggctgctggt aatacatccc cacctggtcc tgcgcaatcg gcactgtcag
    25081 aattcggtgc gtcacatcac ccagtgtctc tttacgctcg gaaagacgaa ttccattttc
    25141 tttggtttcg tttttcggca cttcaaagaa tccgctggtc gcttccccac cattacggcg
    25201 tgagaaggtc tgaacgaaat cgctcggttc cacgttggag taggtgaccg gtagcgcgtt
    25261 ttcacacgcc tggccggaac tgcatcccgg ttgaatcgtc agctcttttg agaccggatc
    25321 gtaagtgact ttatcgcccg gtaaacccac cgcgcgcttg atgtaatcaa gctttggatc
    25381 ttccggatat ttaaagacca cgatatcgcc gcgtttcgga tgaccggttt cgatcagcgt
    25441 tttctggtag ataggatctt taatgccata agcaaacttc tctaccagaa taaaatcacc
    25501 gattaacaga gtcggcatca tcgaacctga cgggatctgg aacggttcat aaataaacga
    25561 acgtacaatc aatacgatag ccagcaccgg aaaaacagaa gcaccggttt ccagccagcc
    25621 aggcttcggc gcaacctttt tcagggttgc tttatccagt gagtcaccgg cagccgcctg
    25681 cgccgctgcc tgacgttccc gccgtttagg tgcgaaaaag aatttatcca cgcaccataa
    25741 aatgcccgtc accagtgtgg caatcaccag aatcagggca aacatattcg ccatgccaac
    25801 tcctaagggt tatttgttgt ctttgccgac gtgcagaatg gcgaggaacg cttcctgcgg
    25861 cagctcgacg ttaccgatct gcttcatgcg tttcttacct tctttctgct tctgcagcag
    25921 ctttttctta cggctgatat cgccgccata acatttagcc agtacgtttt tacgcagctg
    25981 tttcacggtg gatcgcgcaa taatgtgcgt accaatcgct gcctgaatgg cgatatcaaa
    26041 ctgctggcgt gggatcagat ctttcatctt ctccaccaac tcgcgaccgc ggttttgcga
    26101 attatcacgg tgggtgatca gcgccaacgc atcaacacgt tcaccgttga ttaatacgtc
    26161 tacacgtacc atgtcggacg cctggaagcg tttgaagttg taatccagag acgcataacc
    26221 acgcgaggta gatttcaggc gatcgaagaa gtcgagcacc acttccgcca tcgggatctc
    26281 gtacgtcagc gccacctgat taccgtggta aaccatattg gtctgcacgc cgcgtttttc
    26341 tacgcacagc gtaataacgt tgccgagata tgcctgcggc agcagcatgt gacactctgc
    26401 aatcggctcg cgcagttcgt caatgttatt taccgcaggc agcttggatg ggctgtcgac
    26461 gtagataact tcccttgacg tggtttcaac ttcatacact acggtcggcg cagtggtgat
    26521 cagatccaga tcgtattcac gttccagacg ttcctggatg atctccatgt gcagcaggcc
    26581 aaggaagccg cagcggaaac caaagcccag cgcgctggag ctttccggct catagaacag
    26641 tgaggcatca ttcaggctga gtttacccag cgcgtcacgg aaggcttcat agtcgtcgga
    26701 acttaccggg aacagaccgg cgtatacctg cggtttgact ttcttaaagc caggcagcgc
    26761 cttttctgcc ggattacgcg ccagcgttaa ggtatcgccg actggagcgc cgtggatatc
    26821 tttaatcgca cataccagcc agcctacttc gccacatttc agttcagtgc ggtcaacctg
    26881 tttcggcgtg aagatgccca gacggtcggc gttataggtc tgcccggtac tcatgacttt
    26941 cactttgtcg cccttacgca gggtgccgtt tttaatacgg ataagtgaaa caacgcccag
    27001 gtagttgtcg aaccatgagt cgataattag tgcctgcaac gggccttccg gatcgccttc
    27061 cggcggcgga atgtcgcgca ccagacgttc gagaacgtcc tgcacgccaa cgccggtttt
    27121 cgctgaacag cgcaccgcgt cagtggcgtc gatgccgacg atatcttcaa tttcttccgc
    27181 cacgcgttca ggatcggctg ccggcaggtc aatcttgttc agtactggca ccacttcgag
    27241 atccatttcc atggcggtgt agcagtttgc cagggtttgc gcttccacgc cctgcccggc
    27301 gtcgaccacc agcaatgcac cttcacaggc agccagcgaa cgggaaactt cataggagaa
    27361 gtctacgtgg cccggggtgt cgataaagtt aagctgatag gtttcgccgt cagacgcttt
    27421 gtagtccagc gtcacgcttt gcgctttgat ggtaatgcca cgctcacgct caagatccat
    27481 ggaatcgaga acctgcgcct ccatttcacg gtcagacagg ccaccgcaga tctggataat
    27541 acggtcagac agcgtcgatt taccgtggtc aatgtgagct atgatcgaaa agttacgtat
    27601 attcttcata aagtatgatt attgtgcctt aatgcccggt taaccaggct tttagaagtc
    27661 gctgttctga gcttaacgtc tgtattaata gaaacgccgc attctacact acaacattga
    27721 ggcgaggaaa tgttcatacc gtatggattg tggtatctgg aaacgtcctc gcatttgtta
    27781 tgcaaaatgc aacaaagcca gtgaaatcac tggctcgcgt cttccgaaga tgtttcaaat
    27841 cgcacaaggc caggcggcaa tgccacgctt aagatgatcg gttgccattc tgcccgggca
    27901 gcaaacttac gcgagtagcc gcgcgcaatc aggaacccgc caataccgcc gaggaccgca
    27961 ccacataatg ctgcgacgtc agaagcaaag agtagctgaa atagcgaagc gatgaggaat
    28021 aatcccacca gcggcgacat ataaaccagt aatgcggagc taagcaggct gccttcggcg
    28081 atccccaatt ccactttttg ccccggcact aacggttcat cacagggtac gacaatggta
    28141 tgcgtggttt gcgggccaag tttattcaac acgcggctac cgcaaccggc gcgtgaagcg
    28201 cagctgctgc atgaagcttt aacatcacaa ctgaccagcg cctgcccgtt ttgccaggag
    28261 acgacggtag cccactcttt gatcattgcg ctgccccgaa cttaatattc tcggcaatgc
    28321 gtttcgccgt ttgcggcggc agttcaccga caatggtgat ttcggcgtta tcacgtacgc
    28381 ttgtactgac ggttctgcgt ccggtgcgca acatctgatc ggtgctcgat ggcgtagcgc
    28441 ggttaacgtt taccgagaag ctgaataatc cgtcagaata gagacgtgat tcgataggca
    28501 tgttgtccat cgtcggtagc ggacgtcgac tactggaaac ttcgctaaaa ccctgtggca
    28561 accaggttgg cgtccagctg aatttagctt tttcacctac aggaacagaa agcaacggcg
    28621 gcaaatttgc cttcgccagc gtctgcatac tgctgctgat atcctgattg acgttaaaag
    28681 caatcacgcg aaattgttcc agcgtttcac catcgcgatc aaggagatca acccgcatcg
    28741 gtaatttcga ttcggtgtcc atccacacga tgtagctgta gcgtgtacca tctcgggcaa
    28801 ccacgcgaat gacttcgcaa agacgatcag caatacgcgt gcgcccgacg gagataaagt
    28861 cgtagtaagg agaaaggcgt ttgaaatcgg tatagatgag cgatggcaga gaatcaacaa
    28921 tgtaatcgcc attaagcgtg aacggttcaa gtcccggttc aaaatagctg atttcatcgc
    28981 cgcgctgtac cacttcccgg cgcgggccat ccatttgcaa caattgtgca agaggacggt
    29041 tatcgaggcg tgcatgtcga taacgcagag actcaacacc ctgtttattg atgctgatga
    29101 atgacagctc gtaattcagt gactgactgg ccaggttcat ctgctgtaat aacgccccgg
    29161 acgcgggagt ggccgaggcg ttagcagaga ataacaggct acctgtcact aatgacatgg
    29221 caaaccaaag ttgcttcatt actgcgattg cgttcctaaa gtttgaattc ctggcacctg
    29281 tacagcggct tgctgggttt gcgcctgctc aaactgaagc tgttcagagt ggagtcggcg
    29341 ttgcagttcg taatcctgca acattgcatt aatgcgacga cgctgctcct gtacctgctg
    29401 ctgttgacca ttgtttgcgg tcgcttcaga aggtactccc aggcttaccg ggctggcttt
    29461 acccatcatc ggcagtgtat taaataccgg cgtttcgggc tgctgggacg tttcagattg
    29521 tccattatag tgctggacgc caacgataac tgcaagcgat acgcatgctg ctacgcccat
    29581 ttgggtaagc tgtgccgccc acggacgtac tttctgccag aatggcattt tctgccattg
    29641 atgcggcgca ggctgggctt ccgggatcaa tgtcgccggt tgacgtactg gctcttcttc
    29701 aatggcggcc atcacgcgtg aagagatatc gaaatggagc acctcgggag tatcaccccg
    29761 cattgagtca cggattaagt gatagctttc ccaggttttc tgcatttctg ggttatgagc
    29821 cagttcgtta agcagctcac tatccagcgt ttcgccatcc attaaagcgg aaagttgttc
    29881 tttctgcatg cctaataccc ttatccagta tcccgctatc gtcaacgcct gataagcggt
    29941 tgaactttgt tatcaatagc ttccctcgct cggaagatac gtgaacgcac cgtacctacc
    30001 ggacaatcca tgatagcggc tatctcttca tagctcaggc catccagctc ccgcaaggtt
    30061 attgccatgc gcaaatcttc cgggagggac tcaatagttc ggaaaactat ctgtctcagt
    30121 tcttctgaca acattaagtt ctcagggttc gaaatttctt tcaacgcgcc gccactttcg
    30181 aagttttcag cttcaatggc atccacatca ctggaaggtg gacgacgccc ctgagcaacc
    30241 aggtaatttt tcgctgtatt tacagcaatc cgatacagcc atgtataaaa agcgctatct
    30301 ccccggaacg aatccagcgc acgataggct ttaataaaag cttcttgtac cacatcggga
    30361 acatcacccg acggcacata gcgggaaacc agactcgcca ctttatgctg atagcgcact
    30421 accagtaagt taaaggcttt ctgatctccc ttctggaccc gttcaaccag gacctggtcc
    30481 gttaactgct cgctcatccg aggtaaagtc tccccaaacc aaatttccac gcgctatcga
    30541 aacgccactc cattagctgc aatttgagca agcaaagggt tagagtgtct cgtttttgta
    30601 aagttccgta acgcatctgt ttttgtttgt catgctgtag acggatcatt atctatcatt
    30661 ataagtctac agaatctgaa catcgcatta tctgtgtaga aatgcccatt taactgcctg
    30721 aagagtaacc caacggcctt tttatttcac cacctaatcc tccaccagcc agtaacttct
    30781 ctttttctcg ccgccctgca tcagcgtgtt tagcaactgt aacaaatatt aaaatagcag
    30841 gtgtttattc gcacaacatg atgctatact gaccaaaccg tgtttagtaa attaaacaaa
    30901 gaaaatgaat actctccctg aacattcatg tgacgtgttg attattggta gcggcgcagc
    30961 cggactttca ctggcgctac gcctggctga ccagcatcag gtcatcgttc taagtaaagg
    31021 cccggtaacg gaaggttcaa cattttatgc ccagggcggt attgccgccg tgtttgatga
    31081 aactgacagc attgactcgc atgtggaaga cacattgatt gccggggctg gtatttgcga
    31141 tcgccatgca gttgaatttg tcgccagcaa tgctcgttcc tgtgtgcaat ggttaattga
    31201 ccagggggtt ttgtttgata cccacgttca accgaatggc gaagaaagct accatctgac
    31261 ccgtgaagga ggacatagtc accgtcgtat tcttcatgcc gccgacgcca ccggtagaga
    31321 agtacaatcc acgctggtga gcaaggcgca gaaccatccg aatattcgtg tgctggagcg
    31381 cagcaacgca gttgatctga ttgtctctga caaaattggc ctgccgggca cgcgacg
//
LOCUS       DADKRT010000027        30942 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.027, whole genome shotgun sequence.
ACCESSION   DADKRT010000027 DADKRT010000000
VERSION     DADKRT010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 30942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30942
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.027"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            248..631
                     /gene="secE"
                     /locus_tag="JQ356_001055"
     CDS             248..631
                     /gene="secE"
                     /locus_tag="JQ356_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HAY4621221.1"
                     /translation="MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
     gene            633..1178
                     /gene="nusG"
                     /locus_tag="JQ356_001056"
     CDS             633..1178
                     /gene="nusG"
                     /locus_tag="JQ356_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HAY4621222.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMV
                     PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            1338..1766
                     /gene="rplK"
                     /locus_tag="JQ356_001057"
     CDS             1338..1766
                     /gene="rplK"
                     /locus_tag="JQ356_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HAY4621223.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGAGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            1770..2474
                     /gene="rplA"
                     /locus_tag="JQ356_001058"
     CDS             1770..2474
                     /gene="rplA"
                     /locus_tag="JQ356_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HAY4621224.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASVN"
     gene            2887..3384
                     /gene="rplJ"
                     /locus_tag="JQ356_001059"
     CDS             2887..3384
                     /gene="rplJ"
                     /locus_tag="JQ356_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HAY4621225.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            3451..3816
                     /gene="rplL"
                     /locus_tag="JQ356_001060"
     CDS             3451..3816
                     /gene="rplL"
                     /locus_tag="JQ356_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HAY4621226.1"
                     /translation="MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKALEEAGAEVEVK"
     gene            4136..8164
                     /gene="rpoB"
                     /locus_tag="JQ356_001061"
     CDS             4136..8164
                     /gene="rpoB"
                     /locus_tag="JQ356_001061"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HAY4621227.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     EEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            8241..12464
                     /gene="rpoC"
                     /locus_tag="JQ356_001062"
     CDS             8241..12464
                     /gene="rpoC"
                     /locus_tag="JQ356_001062"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HAY4621228.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQIL
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAK
                     TSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQI
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEA
                     PAAPQVTAEDASASLAELLNAGLGGSDNE"
     gene            12677..13216
                     /locus_tag="JQ356_001063"
     CDS             12677..13216
                     /locus_tag="JQ356_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-shock protein C"
                     /protein_id="HAY4621229.1"
                     /translation="MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYR
                     FWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPES
                     NVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVK
                     FFTIAYNLLRNKQLPQPSK"
     gene            complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="JQ356_001064"
     CDS             complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="JQ356_001064"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HAY4621230.1"
                     /translation="MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMA
                     LLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
                     PLAKTEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMD
                     ERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHP
                     ELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL"
     gene            complement(14756..15526)
                     /gene="thiG"
                     /locus_tag="JQ356_001065"
     CDS             complement(14756..15526)
                     /gene="thiG"
                     /locus_tag="JQ356_001065"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418418.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HAY4621231.1"
                     /translation="MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKR
                     VDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDA
                     RWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQG
                     LETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAK
                     AFRLAVEAGLLARQSGPGSRSHFAHATSPLTGFLEASA"
     gene            complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="JQ356_001066"
     CDS             complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="JQ356_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HAY4621232.1"
                     /translation="MQILFNDQPMQCATGQTVHELLEQLDQRQAGAALAINQQIVPRE
                     QWTQHIVQDGDQILLFQVIAGG"
     gene            complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="JQ356_001067"
                     /pseudo
     CDS             complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="JQ356_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709786.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole biosynthesis adenylyltransferase ThiF"
     gene            complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="JQ356_001068"
     CDS             complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="JQ356_001068"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709787.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY4621233.1"
                     /translation="MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRR
                     DEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAG
                     LRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYP
                     TVAIGGISLARAPAVIATGVGSIAVISAITQAADWRLATAQLLEIAGVGDE"
     gene            complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="JQ356_001069"
     CDS             complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="JQ356_001069"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HAY4621234.1"
                     /translation="MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYLTGTHSGVRV
                     PMREIQLSPTLIGGSKEQPQFEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWID
                     ARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL
                     GDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
                     LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQTIEMGMADMSENFRARGGEI
                     YLRKEEA"
     regulatory      complement(19071..19171)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="JQ356_001070"
     CDS             complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="JQ356_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma D regulator"
                     /protein_id="HAY4621235.1"
                     /translation="MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQ
                     IMDYYDSSLETAIDHDNYLEFQKVLSDIGEALEARFVLEDKLILLVLDAARVKHPA"
     gene            19795..20568
                     /gene="nudC"
                     /locus_tag="JQ356_001071"
     CDS             19795..20568
                     /gene="nudC"
                     /locus_tag="JQ356_001071"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HAY4621236.1"
                     /translation="MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRAL
                     QIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVVLFQLAGRGVQLAEFYRSHKYCGYCG
                     HEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE"
     gene            20608..21672
                     /gene="hemE"
                     /locus_tag="JQ356_001072"
     CDS             20608..21672
                     /gene="hemE"
                     /locus_tag="JQ356_001072"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HAY4621237.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVP
                     PEHAGVFVEAVHRLSEQYHR"
     gene            21682..22353
                     /gene="nfi"
                     /locus_tag="JQ356_001073"
     CDS             21682..22353
                     /gene="nfi"
                     /locus_tag="JQ356_001073"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HAY4621238.1"
                     /translation="MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYILGFLSFREYPALLAAWEMLSQKPDLVFV
                     DGHGISHPRRLGVASHFGLMVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRY
                     TANQP"
     gene            22396..22986
                     /locus_tag="JQ356_001074"
     CDS             22396..22986
                     /locus_tag="JQ356_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HAY4621239.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVVLSE
                     LVHSRLSGETLEHAVEVSKTSITTVAMLEMTQVGREMSDEELKENPAVEQEWDIQWEI
                     FRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ"
     gene            23173..23445
                     /gene="hupA"
                     /locus_tag="JQ356_001075"
     CDS             23173..23445
                     /gene="hupA"
                     /locus_tag="JQ356_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HAY4621240.1"
                     /translation="MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            23458..24153
                     /locus_tag="JQ356_001076"
     CDS             23458..24153
                     /locus_tag="JQ356_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HAY4621241.1"
                     /translation="MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASG
                     FAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPV
                     NIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQG
                     RWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVAN
                     SDFCRWQPNEKTF"
     gene            complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="JQ356_001077"
     CDS             complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="JQ356_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HAY4621242.1"
                     /translation="MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQ
                     QTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLD
                     ELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW"
     gene            24818..26194
                     /gene="zraS"
                     /locus_tag="JQ356_001078"
     CDS             24818..26194
                     /gene="zraS"
                     /locus_tag="JQ356_001078"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HAY4621243.1"
                     /translation="MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAA
                     ARQTLLEKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTI
                     VMHSNSGMVGKQLYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQFQPMFAAGMHR
                     MRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALATVLLASVLSFFWYRRY
                     LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQL
                     AQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRF
                     TANDTLPEIQADPDRLTQVLLNLYLNAIQAIVQHGVISVTVSESGAGVKISVTDSGKG
                     IAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVN
                     ITRKDPQG"
     gene            26191..27515
                     /gene="zraR"
                     /locus_tag="JQ356_001079"
                     /pseudo
     CDS             26191..27515
                     /gene="zraR"
                     /locus_tag="JQ356_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418432.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
     gene            complement(27512..28801)
                     /gene="purD"
                     /locus_tag="JQ356_001080"
     CDS             complement(27512..28801)
                     /gene="purD"
                     /locus_tag="JQ356_001080"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HAY4621244.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQ
                     NVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLE
                     GSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLDEKTSEWDERASLGV
                     VMAAGGYPGDYRTGDVIHGLLLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGH
                     TVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN"
     gene            complement(28813..30402)
                     /gene="purH"
                     /locus_tag="JQ356_001081"
     CDS             complement(28813..30402)
                     /gene="purH"
                     /locus_tag="JQ356_001081"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HAY4621245.1"
                     /translation="MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVV
                     VNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEM
                     DDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVK
                     EFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRD
                     LGMVGAEELRVVTQRQPTEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEV
                     IAAADEHGIAMLFTDMRHFRH"
BASE COUNT         7336 a         7987 c         8432 g         7187 t
ORIGIN      
        1 gcaaaagttc tgagctaatt gccgataaca tttgactcaa tgcgcactaa aagggcatca
       61 tttgatgccc tttttgcacg ctttcgtacc agaacctggc tcatcagtga ttttctttgt
      121 cataatcatt gctgagacag gctctgttga gggcgtataa tccgaaaagc taatacgcgt
      181 ttcgatttgg tttgcctcgc gatcgcgggg tgaaaatgtt tgtagaaaac ttctgacagg
      241 ttggtttatg agtgcgaata ccgaagctca aggaagcggg cgcggcctgg aagcgatgaa
      301 gtgggtcgtt gtggtggcat tgctcttggt ggcgattgtc ggcaactacc tttatcgcga
      361 cattatgctg ccgctgcgtg cgctggccgt agtaattctg attgctgcag cgggtggtgt
      421 cgcgctgtta acgacaaaag gtaaagctac cgttgctttt gcccgtgaag cgcgtaccga
      481 agtccgtaag gtcatttggc cgactcgcca ggaaacattg cacaccacgc tgattgtggc
      541 tgcggttacc gcagtaatgt cactgatcct gtggggactg gatggtattc tggttcgcct
      601 ggtatccttt atcactggcc tgaggttctg agatgtctga agctcctaaa aagcgctggt
      661 acgtcgttca ggcgttttcc ggttttgaag gccgcgtagc aacgtcgctg cgtgagcata
      721 tcaaattaca caacatggaa gatttgtttg gtgaagtcat ggtaccaacc gaagaagtgg
      781 ttgaaatccg tggcggtcag cgtcgcaaaa gcgaacgtaa attcttccct ggctacgtcc
      841 tcgttcagat ggtgatgaac gacgcgagct ggcacctggt gcgcagcgta ccgcgagtga
      901 tgggcttcat cggcggtact tccgatcgtc ctgcgccaat cagcgataaa gaagtcgatg
      961 cgattatgaa ccgcctgcag caggttggtg ataagccgcg tccgaaaacg ctgtttgaac
     1021 cgggtgaaat ggtccgtgtt aatgatggtc cgttcgctga cttcaacggt gttgttgaag
     1081 aagtggatta cgagaaatct cgtctgaaag tgtctgtttc tatcttcggt cgtgcgaccc
     1141 cggtagagct ggacttcagc caggttgaaa aagcctaacc cagcgatcaa aaaagcggcg
     1201 atttaatcgt tgcacaaggc gcgagattgg aatacaattt cgcgcctttt atttttatgg
     1261 gccttgcccg taaaaacgat tttttatatc acggggagcc tctcagaggc gttattaccc
     1321 aacttgagga atttataatg gctaagaaag tacaagccta tgtcaagctg caggttgcag
     1381 ctggtatggc taacccgagt ccgccagtag gtccggctct gggtcagcag ggcgtaaaca
     1441 tcatggaatt ctgcaaagcg ttcaacgcaa aaactgattc catcgaaaaa ggtctgccga
     1501 ttccggtagt aatcaccgtt tacgctgacc gttctttcac tttcgttacc aagaccccgc
     1561 cggcagcagt tctgctgaaa aaagcggctg gtatcaagtc tggtgccggt aagccgaaca
     1621 aagacaaagt gggtaaaatt tcccgcgctc agctgcagga aatcgcgcag accaaagctg
     1681 ccgacatgac tggtgccgac attgaagcga tgactcgctc catcgaaggt actgcacgtt
     1741 ccatgggcct ggtagtggag gactaagaaa tggctaaact gaccaagcgc atgcgtgtta
     1801 tccgcgagaa agttgatgca accaaacagt acgacatcaa cgaagctatc gcactgctga
     1861 aagagctggc gactgctaaa ttcgtagaaa gcgtggacgt agctgttaac ctcggcatcg
     1921 acgctcgtaa atctgaccag aacgtacgtg gtgcaactgt actgccgcac ggtactggcc
     1981 gttccgttcg cgtagccgta tttacccaag gtgcaaacgc tgaagctgct aaagctgcag
     2041 gcgcagaact ggtaggtatg gaagatctgg ctgaccagat caagaaaggc gaaatgaact
     2101 ttgacgttgt tattgcttct ccggatgcaa tgcgcgttgt tggccagctg ggccaggttc
     2161 tgggtccgcg cggcctgatg ccaaacccga aagtgggtac tgtaacaccg aacgttgctg
     2221 aagcggttaa aaacgctaaa gctggccagg ttcgttaccg taacgacaaa aacggcatca
     2281 tccacaccac catcggtaaa gtggactttg acgctgacaa actgaaagaa aacctggaag
     2341 ctctgctggt tgcgctgaaa aaagcaaaac cgactcaggc gaaaggcgtg tacatcaaga
     2401 aagttagcat ctccaccacc atgggtgcag gtgttgcagt tgaccaggct ggcctgagcg
     2461 cttctgtaaa ctaatgcctt tacgtgggcg gtgattttgt ctacaatctt acccccacgt
     2521 ataatgctta atgcagacgt atatccgaga tattcgggtt gtggcaaggc ggcaactgag
     2581 tgagtcgcca agagcatagc taactatgtg actggtgcga atgaaggaag ccaacgccgc
     2641 cacaagttga atagcgacgg atagaaaaga tttgttcgtt ggagcttggc ctatccaggc
     2701 ctccgtcgaa gaccgcagga gtttcgcaag aaacttaatc ccctgcgtag acggtgacag
     2761 aacgctaaga ttattctttt atattctggc ttgtttctgc tcaccgtaat taagacgctc
     2821 tctccgtttg gaggagtgaa gtgagttcca gagattttct ctggcaaaca tccaggagca
     2881 aagctaatgg ctttaaatct tcaagacaaa caagcgattg ttgctgaagt cagcgaagta
     2941 gccaaaggcg cgctgtctgc agtagttgcg gattcccgtg gcgtaactgt agataaaatg
     3001 actgaactgc gtaaagcagg tcgcgaagct ggcgtataca tgcgtgttgt tcgtaacacc
     3061 ctgctgcgcc gtgctgttga aggtactccg ttcgagtgcc tgaaagacgc gtttgttggt
     3121 ccgaccctga ttgcatactc tatggaacac ccgggcgctg ctgctcgtct gttcaaagag
     3181 ttcgcgaaag cgaatgcaaa atttgaggtc aaagccgctg cctttgaagg tgagctgatc
     3241 ccggcgtctc agatcgaccg cctggcaact ctgccgacct acgaagaagc aattgcacgc
     3301 ctgatggcaa ccatgaaaga agcttcggct ggcaaactgg ttcgtactct ggctgctgta
     3361 cgcgatgcga aagaagctgc ttaatcgcag ttatcttttt aacgcattcg cttacgtata
     3421 aacttattct gatattcagg aacaatttaa atgtctatca ctaaagatca aatcattgaa
     3481 gcagttgcag ctatgtctgt aatggacgtt gtagaactga tctctgcaat ggaagaaaaa
     3541 ttcggtgttt ccgctgctgc tgctgtagct gtagctgctg gcccggttga agctgctgaa
     3601 gaaaaaactg aattcgacgt aattctgaaa gctgctggcg ctaacaaagt tgctgttatc
     3661 aaagcagtac gtggcgcaac tggcctgggt ctgaaagaag ctaaagacct ggtagaatct
     3721 gcaccggctg ctctgaaaga aggcgtgagc aaagacgacg cagaagcact gaaaaaagct
     3781 ctggaagaag ctggcgctga agttgaagtt aaataagcca acccttccgg ttgcagcctg
     3841 agaaatcagg ctgatggctg gtgacttttt agtcaccagc ctttttgcgc tgtaaggcgc
     3901 cagtagcgtt tcacactgtt tgactactgc tgtgcctttc aatgcttgtt tctatcgacg
     3961 acttaatata ctgcgacagg acgtccgttc tgtgtaaatc gcaatgaaat ggtttaagcg
     4021 tgatagcaac aggcattgcg gaaagtgttc cattttccgg tcaacaaaat agtgttgcac
     4081 aaactgtccg ctcaatggac agatgggtcg acttgtcagc gagctgagga accctatggt
     4141 ttactcctat accgagaaaa aacgtattcg taaggatttt ggtaaacgtc cacaagttct
     4201 ggatgtacct tatctccttt ctatccagct tgactcgttt cagaaattta tcgagcaaga
     4261 tcctgaaggg cagtatggtc tggaagcagc tttccgttcc gtattcccga ttcagagcta
     4321 cagcggtaat tccgagctgc aatacgtcag ctaccgcctt ggcgaaccgg tgtttgacgt
     4381 ccaggaatgt caaatccgtg gcgtgaccta ttccgcaccg ctgcgcgtta aactgcgtct
     4441 ggtgatctat gagcgcgaag cgccggaagg caccgtaaaa gacattaaag aacaagaagt
     4501 ctacatgggc gaaattccgc tcatgacaga caacggtacc tttgttatca acggtactga
     4561 gcgtgttatc gtttcccagc tgcaccgtag tccgggcgtc ttctttgact ccgacaaagg
     4621 taaaacccac tcttcgggta aagtgctgta taacgcgcgc atcatccctt accgtggttc
     4681 ctggctggac ttcgaattcg atccgaagga caacctgttc gtacgtatcg accgtcgccg
     4741 taaactgcct gcgaccatca ttctgcgcgc cctgaactac accacagagc agatcctcga
     4801 cctgttcttt gaaaaagtta tctttgaaat ccgtgataac aagctgcaga tggaactggt
     4861 gccggaacgc ctgcgtggtg aaaccgcatc ttttgacatc gaagctaacg gtaaagtgta
     4921 cgtagaaaaa ggccgccgta tcactgcgcg ccacattcgc cagctggaaa aagacgacgt
     4981 caaacttatc gaagtcccgg ttgagtacat cgcaggtaaa gtggttgcta aagactatat
     5041 tgatgagtct accggcgagc tgatctgcgc agcgaacatg gagctgagcc tggatctgct
     5101 ggctaagctg agccagtctg gtcacaagcg tatcgaaacg ctgttcacca acgatctgga
     5161 tcacggccca tatatctctg aaaccttacg tgtcgaccca actaacgacc gtctgagcgc
     5221 actggtagaa atctaccgca tgatgcgccc tggcgagccg ccgactcgtg aagcagctga
     5281 aagcctgttc gagaacctgt tcttctccga agaccgttat gacttgtctg cggttggtcg
     5341 tatgaagttc aaccgttctc tgctgcgcga agaaatcgaa ggttccggta tcctgagcaa
     5401 agacgacatc attgatgtta tgaaaaagct catcgatatc cgtaacggta aaggcgaagt
     5461 cgatgatatc gaccacctcg gcaaccgtcg tatccgttcc gttggcgaaa tggcggaaaa
     5521 ccagttccgc gttggcttgg tacgtgtaga gcgtgcggtg aaagagcgtc tgtctctggg
     5581 cgatctggat accctgatgc ctcaggatat gatcaacgcc aagccgattt ccgcagcagt
     5641 gaaagagttc ttcggttcca gccagctgtc tcagtttatg gaccagaaca acccgctgtc
     5701 tgagattacg cacaaacgtc gtatctccgc actcggccca ggcggtctga cccgtgaacg
     5761 tgcaggcttc gaagttcgag acgtacaccc gactcactac ggtcgcgtat gtccaatcga
     5821 aacccctgaa ggtccgaaca tcggtctgat caactctctg tccgtgtacg cacagactaa
     5881 cgaatacggc ttccttgaga ctccgtatcg taaagtgacc gacggtgttg taactgacga
     5941 aattcactac ctgtctgcta tcgaagaagg caactacgtt atcgcccagg cgaactccaa
     6001 cctggatgaa gaaggccact tcgtagaaga cctggtaact tgccgtagca aaggcgaatc
     6061 cagcttgttc agccgcgacc aggttgacta catggacgta tccacccagc aggtggtatc
     6121 cgtcggtgcg tccctgatcc cgttcctgga acacgatgac gccaaccgtg cattgatggg
     6181 tgcgaacatg caacgtcagg ccgttccgac tctgcgcgct gataagccgc tggttggtac
     6241 tggtatggaa cgtgctgttg ccgttgactc cggtgtaact gcggtagcta aacgtggtgg
     6301 tgtcgttcag tacgtggatg cttcccgtat cgttatcaaa gttaacgaag acgagatgta
     6361 tccgggtgaa gcaggtatcg acatctacaa cctgaccaaa tacacccgtt ctaaccagaa
     6421 cacctgtatc aaccagatgc cgtgtgtgtc tctgggtgaa ccggttgaac gtggcgacgt
     6481 gctggcagac ggtccgtcca ccgacctcgg tgaactggcg cttggtcaga acatgcgcgt
     6541 agcgttcatg ccgtggaatg gttacaactt cgaagactcc atcctcgtat ccgagcgtgt
     6601 tgttcaggaa gaccgtttca ccaccatcca cattcaggaa ctggcgtgtg tgtcccgtga
     6661 caccaagctg gggccggaag agatcaccgc tgacatcccg aacgtgggtg aagctgcgct
     6721 ctccaaacta gatgaatccg gtatcgttta cattggtgcg gaagtgaccg gtggcgacat
     6781 tctggttggt aaggtaacgc cgaaaggtga aactcagctg accccagaag aaaaactgct
     6841 gcgtgcgatc ttcggtgaga aagcctctga cgttaaagac tcttctctgc gcgtaccaaa
     6901 cggtgtatcc ggtacggtta tcgacgttca ggtctttact cgcgatggcg tagaaaaaga
     6961 caaacgtgcg ctggaaatcg aagaaatgca gctcaaacag gcgaagaaag acctgtctga
     7021 agaactgcag atcctcgaag cgggtctgtt cagccgtatc cgtgctgtgc tggtagccgg
     7081 tggcgttgaa gctgagaagc tcgacaaact gccgcgcgat cgctggctgg agctgggcct
     7141 gacagacgaa gagaaacaaa atcagctgga acagctggct gagcagtatg acgaactgaa
     7201 acacgagttc gagaagaaac tcgaagcgaa acgccgcaaa atcacccagg gcgacgatct
     7261 ggcaccgggc gtgctgaaga ttgttaaggt atatctggcg gttaaacgcc gtatccagcc
     7321 tggtgacaag atggcaggtc gtcacggtaa caagggtgta atttctaaga tcaacccgat
     7381 cgaagatatg ccttacgatg aaaacggtac gccggtagac atcgtactga acccgctggg
     7441 cgtaccgtct cgtatgaaca tcggtcagat cctcgaaacc cacctgggta tggctgcgaa
     7501 aggtatcggc gacaagatca acgccatgct gaaacagcag caagaagtcg cgaaactgcg
     7561 cgaattcatc cagcgtgcgt acgatctggg cgctgacgtt cgtcagaaag ttgacctgag
     7621 taccttcagc gatgaagaag ttatgcgtct ggctgaaaac ctgcgcaaag gtatgccaat
     7681 cgcaacgccg gtgttcgacg gtgcgaaaga agcagaaatt aaagagctgc tgaaacttgg
     7741 cgacctgccg acttccggtc agatccgcct gtacgatggt cgcactggtg aacagttcga
     7801 gcgtccggta accgttggtt acatgtacat gctgaaactg aaccacctgg tcgacgacaa
     7861 gatgcacgcg cgttccaccg gttcttacag cctggttact cagcagccgc tgggtggtaa
     7921 ggcacagttc ggtggtcagc gtttcgggga gatggaagtg tgggcgctgg aagcatacgg
     7981 cgcagcatac accctgcagg aaatgctcac cgttaagtct gatgacgtga acggtcgtac
     8041 caagatgtat aaaaacatcg tggacggcaa ccatcagatg gagccgggca tgccagaatc
     8101 cttcaacgta ttgttgaaag agattcgttc gctgggtatc aacatcgaac tggaagacga
     8161 gtaattctcg ctcaaacagg tcactgctgt cgggttaaaa cccggcagcg gattgtgcta
     8221 actccgacgg gagcaaatcc gtgaaagatt tattaaagtt tctgaaagcg cagactaaaa
     8281 ccgaagagtt tgatgcgatc aaaattgctc tggcttcgcc agacatgatc cgttcatggt
     8341 ctttcggtga agttaaaaag ccggaaacca tcaactaccg tacgttcaaa ccagaacgtg
     8401 acggcctttt ctgcgcccgt atctttgggc cggtaaaaga ttacgagtgc ctgtgcggta
     8461 agtacaagcg cctgaaacac cgtggcgtca tctgtgagaa gtgcggcgtt gaagtgaccc
     8521 agactaaagt acgccgtgag cgtatgggcc acatcgaact ggcttccccg actgcgcaca
     8581 tctggttcct gaaatcgctg ccgtcccgta tcggtctgct gctcgatatg ccgctgcgcg
     8641 atatcgaacg cgtactgtac tttgaatcct atgtggttat cgaaggcggt atgaccaacc
     8701 tggaacgtca gcagatcctg actgaagagc agtatctgga cgcgctggaa gagttcggtg
     8761 acgaattcga cgcgaagatg ggtgcggaag caatccaggc tctgctgaag agcatggatc
     8821 tggagcaaga gtgcgaacag ctgcgcgaag agctgaacga aaccaactcc gaaaccaagc
     8881 gtaaaaagct gaccaagcgt atcaaactgc tggaagcgtt cgttcagtct ggtaacaaac
     8941 cagagtggat gatcctgacc gttctgccgg tactgccgcc agatctgcgt ccgctggttc
     9001 cgctggatgg tggtcgtttc gcgacttctg acctgaacga tctgtatcgt cgcgtcatta
     9061 accgtaacaa ccgtctgaaa cgtctgctgg atctggctgc gccggacatc atcgtacgta
     9121 acgaaaaacg tatgctgcag gaagcggtag acgccctgct ggataacggt cgtcgcggtc
     9181 gtgcgatcac cggttctaac aagcgtcctc tgaaatcttt ggccgacatg atcaaaggta
     9241 aacagggtcg tttccgtcag aacctgctcg gtaagcgtgt tgactactcc ggtcgttctg
     9301 taatcaccgt aggtccatac ctgcgtctgc atcagtgcgg tctgccgaag aaaatggcgc
     9361 tggagctgtt caaaccgttc atctacggca agctggaact gcgtggtctt gctaccacca
     9421 ttaaagctgc gaagaaaatg gttgagcgcg aagaagctgt cgtttgggat atcctggacg
     9481 aagttatccg cgaacacccg gtactgctga accgtgcacc gactctgcac cgtctgggta
     9541 tccaggcatt tgaaccggta ctgatcgaag gtaaagctat ccagctgcac ccgctggttt
     9601 gtgcggcata taacgccgac ttcgatggtg accagatggc tgttcacgta ccgctgacgc
     9661 tggaagccca gctggaagcg cgtgcgctga tgatgtctac caacaacatc ctgtccccgg
     9721 cgaacggcga accaatcatc gttccgtctc aggacgttgt tctgggtctg tactatatga
     9781 cccgtgactg tgttaacgcc aaaggcgaag gcatggtgct gactggcccg aaagaagcag
     9841 aacgtctgta tcgctctggt ctggcttctc tgcatgcgcg cgttaaagtg cgtatcaccg
     9901 agtatgaaaa agatgcaaac ggtgaattag tagcgaaaac cagcctgaaa gacacgactg
     9961 ttggccgtgc cattctgtgg atgattgtac cgaaaggtct gccttactcc atcgtcaacc
    10021 aggcgctggg taaaaaagca atctccaaaa tgctgaacac ctgctaccgc attctcggtc
    10081 tgaaaccgac cgttattttt gcggaccaga tcatgtacac cggcttcgcc tatgcagcgc
    10141 gttctggtgc atctgttggc atcgatgaca tggtcatccc ggagaagaaa cacgaaatca
    10201 tctccgaggc agaagcagaa gttgctgaaa ttcaggagca gttccagtct ggtctggtaa
    10261 ctgcgggcga acgctacaac aaagttatcg atatctgggc tgcggcgaac gatcgtgtat
    10321 ccaaagcgat gatggataac ctgcaaactg aaaccgtgat taaccgtgac ggtcaggaag
    10381 agaagcaggt ttccttcaac agcatctaca tgatggccga ctccggtgcg cgtggttctg
    10441 cggcacagat tcgtcagctt gctggtatgc gtggtctgat ggcgaagccg gatggctcca
    10501 tcatcgaaac gccaatcacc gcgaacttcc gtgaaggtct gaacgtactc cagtacttca
    10561 tctccaccca cggtgctcgt aaaggtctgg cggataccgc actgaaaact gcaaactccg
    10621 gttacctgac tcgtcgtctg gttgacgtgg cgcaggacct ggtggttacc gaagacgatt
    10681 gtggtaccca tgaaggtatc atgatgactc cggttatcga aggtggtgat gttaaagagc
    10741 cgctgcgcga tcgcgtactg ggtcgtgtaa ctgctgaaga cgttctgaag ccgggtactg
    10801 ctgatatcct cgttccgcgc aacacgctgc tgcacgaaca gtggtgtgac ctgctggaag
    10861 agaactctgt cgacgcggtt aaagtacgtt ctgttgtatc ttgtgacacc gactttggtg
    10921 tatgtgcgca ctgctacggt cgtgacctgg cgcgtggcca catcatcaac aagggtgaag
    10981 caatcggtgt tatcgcggca cagtccatcg gtgaaccggg tacacagctg accatgcgta
    11041 cgttccacat cggtggtgcg gcatctcgtg cggctgctga atccagcatc caggtgaaaa
    11101 acaaaggtag catcaagctc agcaacgtga agtcggttgt gaactccagc ggtaaactgg
    11161 ttatcacttc ccgtaatact gaactgaaac tgatcgacga attcggtcgt accaaagaaa
    11221 gctacaaagt accttacggt gcggtactgg cgaaaggcga tggcgaacag gttgctggcg
    11281 gcgaaaccgt tgcaaactgg gacccgcaca ccatgccggt tatcaccgaa gtaagcggtt
    11341 ttgtacgctt tactgacatg atcgacggtc agaccattac tcgtcagaca gacgaattga
    11401 ccggtctgtc ttcgctggtg gttctggatt ccgcagaacg taccgcaggt ggtaaagatc
    11461 tgcgtccggc actgaaaatc gttgatgctc agggtaacga cgttctgatt ccgggtaccg
    11521 atatgcctgc gcagtacttc ctgccgggta aagcgattgt tcagctggaa gatggcgtac
    11581 agatcagctc tggtgacacc ctggcgcgta ttccgcagga atccggcggt accaaggaca
    11641 tcaccggtgg tctgccgcgc gttgcggacc tgttcgaagc acgtcgtccg aaagagccgg
    11701 caatcctggc tgaaatcagc ggtatcgttt ccttcggtaa agaaaccaaa ggtaaacgtc
    11761 gtcttgttat caccccggta gacggtagcg atccgtacga agagatgatt ccgaaatggc
    11821 gtcagctcaa cgtgttcgaa ggtgaacgtg tagaacgtgg tgacgtaatt tccgacggtc
    11881 cggaagcgcc gcacgacatt ctgcgtctgc gtggtgttca tgctgttact cgttacatcg
    11941 ttaacgaagt acaggacgta taccgtctgc agggcgttaa gattaacgat aaacacatcg
    12001 aagttatcgt tcgtcagatg ctgcgtaaag ctaccatcgt taacgcgggc agctccgact
    12061 tcctggaagg cgaacaggtt gaatactctc gcgtcaagat cgcaaaccgc gaactggaag
    12121 cgaacggcaa agtgggtgca acttactccc gcgatctgct gggtatcacc aaagcgtctc
    12181 tggcaaccga gtccttcatc tccgcggcat cgttccagga gaccactcgc gtgctgaccg
    12241 aagcagccgt tgcgggcaaa cgcgacgaac tgcgcggcct gaaagagaac gttatcgtgg
    12301 gtcgtctgat cccggcaggt accggttacg cgtaccacca ggatcgtatg cgtcgccgtg
    12361 ctgcgggtga agctccggct gcaccgcagg tgactgcaga agacgcatct gccagcctgg
    12421 cagaactgct gaacgcaggt ctgggcggtt ctgataacga gtaatcgtta atccgcaaat
    12481 aacgtaaaaa cccgcttcgg cgggtttttt tatgggggga gtttagggaa agagcatttg
    12541 tcagaatatt taaggaattt ctgaatactc ataatcaatg tagagatgac taatatcctg
    12601 aaactgactg aactaattga gtcaaactcg gcaaggattc gatactattc ctgtgtaact
    12661 ttcttaagga acgagaatga aacaggaagt ggaaaagtgg cgaccttttg gacatccgga
    12721 tggtgatatt cgtgatttat catttcttga tgctcatcag gctgtctacg ttcagcatca
    12781 tgagggcaaa gagcctttag agtatcgctt ttgggttacc tactctcttc actgcttcac
    12841 aaaagattat gaacatcaga cgaacgaaga aaaacaatcg ttaatgtacc acgcgcctaa
    12901 agaatctcgt cccttctgcc agcaccgtta taacttagcg cgcacacact taaaaagaac
    12961 tattttggcg ctgccagaaa gcaacgttat tcatgccggg tatggtagct atgccgtgat
    13021 tgaggtggac ttagacggag gagataaggc attttacttt gttgcgttca gggctttcag
    13081 ggaaaagaaa aaactccgtt tgcatgtaac tagcgcttat cccatttctg aaaaacagaa
    13141 aggtaaatca gtgaaatttt tcaccattgc ctacaactta ttgagaaata agcagcttcc
    13201 tcagccctca aaataacaaa acccacctta aggtgggttt cgccagagaa ttatctctgg
    13261 tattcagaac gccattaccg gactttgcct tgaccttgcg ataatcgcag gttgcgggat
    13321 gtctgaattt cttcagtctg ctgcatcctg gaagatgaga acatgtgttc ttattttcgt
    13381 ctctatcata gttgagtatt tactctctta caatcagatc tctttcattg ctcaacaggc
    13441 gatggcttca gactttgcat tacggaattt ttaagaaagg cagggcgaaa cgaggaagaa
    13501 gcttttcgcc ctggacaaca ttcctgctga cggcactacc ataaaaaaac acaacgcttt
    13561 caacaacctt gcgtttttca tcttccgtag cggctcggaa taaatttacg ttcttacatt
    13621 ccgtctcata gtctttgcga ggcccgtccc agatagctgt cccagtcttt ccataccggc
    13681 tgcaaaccct gagcggttaa cgcggcagca accgcttccg gtctgcgatc gtcgtgcggt
    13741 gagaactgtt ccaactcggg gtgattatcg gcatagccac ctggctgcgt tttcgagaag
    13801 gcgctgacgt tattgatcgc cagcggaata acgcgatcgc gaaaccacgg tgattcccgc
    13861 gtggagagtg acagttcaat ctccggtgca agcagtcgga aggcgcagat ggtttgcact
    13921 aactggcgtt catccataat cgacgcaggc tcaatgccgc cagtacacgg gcgcaggcgc
    13981 ggaaaggaga cagagtaacg gctttgccag taatgctgtt gcagccatag caaatgttcg
    14041 gcaaccatat agcagtcaac gcgccagttg tcggaaaggc caattagcgc gccgaggcct
    14101 atcttatcaa tccccgcacg ccccagccga tccggcgttt ccagccgcca gaagaagtcc
    14161 tgttttttgc ctttcagatg atggcgggca taagtcgcct cgtgatatgt ctcctgataa
    14221 accatcacgc catccagacc aagctgcttt aactcggcgt attccgtctt cgccagcggt
    14281 tgcacttcca tttgtagtga agagaactgt tcacgcaggg cggggagatg acgacgaaag
    14341 taatccatcc ccactttcgc ctgatgttca ccagtgacta atagcagatg ttcaaagccc
    14401 atctcccgta tagcggcgct ttccctggca atatccgctt catccagcgt tttgcgcttg
    14461 atgcgattac tcatggaaaa tccgcagtac gtgcagtcgt tagcgcaaag attggaaaga
    14521 taaagcggga cgtagaaact aactgtgttg ccaaatcgct gacgggtcag acgctgcgcc
    14581 cgttgggcca gttgttccag atagccactg gcggctggcg ataacagcgc catcatatcg
    14641 tcgcgggtga attgcgaggc atttagcgcc cgctctacgt caacagccgt tttgccgttg
    14701 atacgcaggc ggatgtcatc ccagtccagt tgtcgccagc gatcgctgaa ggttttcatg
    14761 ccgatgcctc cagaaatcca gtcagcgggc tggtggcatg agcaaaatga ctgcggctgc
    14821 ccggtccgga ctgacgtgcc agcaggcctg cttctaccgc cagacgaaat gccttcgcca
    14881 tgttgacggg atcgtccgct acggcaatcg ccgtattcac taacaccgcg tcggccccca
    14941 tttccagggc ctgcgctgca tggctgggaa cgccgatgcc agcatcgaca accaccggaa
    15001 ctgtggcctg ctggataata atctccagca tggcacgggt ttccagtccc tgattcgagc
    15061 caatcggcgc gccgagcggc atcaccgctg cacagccgac ttcttccaga cgtttacaca
    15121 ataccggatc ggccccgcag taaggcagca cgacaaatcc ctgttgtacc agcatttcgg
    15181 cggctttcag agtttcgatg ggatcgggca acagccagcg ggcgtcaggg tgaatctcta
    15241 attttaacca gtttgtgcct aacgcttcac gtgccagatg ggcggcgaaa atggcttctt
    15301 ccgctgtttt cgccccggaa gtatttggca gcagggtcac acccgccgcg ataagcggtt
    15361 cgaggatagc gtcgttgtgc tggcgcaagt cgacacgttt catcgccagt gtcaccagct
    15421 ggctgccgga agcgcggatc gcctccacca tcagttgtga agaagcgaat ttccctgtgc
    15481 cggtaaacag atgtgaatca aacgttttgt ccgcaatacg taacatctca accccctgca
    15541 ataacctgaa aaagcaggat ctggtcgcca tcctgcacga tatgttgcgt ccactgctca
    15601 cgcgggacga tttgctgatt aatcgccaga gccgcgcccg cttgtcgttg gtcgagttgc
    15661 tccagtagtt cgtgaacagt ttgcccggtg gcgcactgca tcggttgatc gttaaacagg
    15721 atctgcattg cttcctccgc ataccgggca accactggcg cggcgcaacg ccaggctgcg
    15781 ccactggctc gatttaccgt cgaacagtcg gagttctccc gcaggtgtct ctataccgct
    15841 taataactta atggcttcca gtgcctgcaa agtgcccata accccgacca ccgggccaac
    15901 cacgcccgcc gtgcggcagt tgcgttctgg ctcctggtta tctggccaca ggcagcggta
    15961 acacccctgc tcccagggcg gcgtcagtac catcaactga ccgccaaatc cgaccgcgct
    16021 ggcggtgata agcggcgtgt tgagtaccac gcaggcggca ttaatctcct ggcgagtcgc
    16081 catattgtcg gtacagtcga gcaccacatc ggcccgtgca accgcatctt ttaacgcctc
    16141 acccgttaac cgttgttgta atgctgtcag ttgaatgtcg ggattcaact gtgtcagtcg
    16201 ctgttggctg acctgcgatt tcgggctgtt gatatcttca gtggtaaaga gaatttgtcg
    16261 ttacagattg cttaaatgca catcgtcgtc atctgccagt accagcgtcc cgacgccagc
    16321 gcccgccagg tatagcgcag caggtgtacc cagcccgcca agaccgataa tcagcacctg
    16381 gctgtcgagc agtttttgct gcccgtcaag agcgatatca tcgagcagga tttggcggct
    16441 ataacgcata aaatcacggt cattcatcgc caactcctgc aatttccagc aactgtgccg
    16501 ttgccaaacg ccagtctgcg gcttgagtaa tggcgctgat gacggcgata ctgccgacac
    16561 ccgttgctat caccgcaggc gcgcgtgcca gactgatacc gccaatcgcc acggtgggat
    16621 aatccgccag tcgctcaaca tgccgtgcca gctgttccag cccctgcggt gcagaaggca
    16681 tctgtttggt ttgcgtcggg aacacatgtc ccagcgcgat ataagagggg cgtgctgcca
    16741 gcgcgacgtc gatttccata tcgtcatgtg tcgaaacacc cagccgcagg cctgccgcgc
    16801 ggatggcatt gagatcggtg gcttgcaaat cttcctgccc caaatggacg ccatacgcct
    16861 gatgcttgat cgcgagccgc cagtaatcgt tgataaacaa tcgcgcgtta tagcggcggc
    16921 ccagcgcaat tgccgccacg acatcggctt ccacctcttc atcgcgccga tctttgatgc
    16981 gtagctggag agtacgtacg cctgcatcca acagacgttc gatccactgt acgctgtcca
    17041 ccactgggta cagtcctaaa cgaaaaggta caggaggaaa atcaggctga tacatcacgc
    17101 ttcctcctta cgcaggtaga tttctccgcc tctggcacgg aagttctccg acatatccgc
    17161 cattcccatt tcaatagttt gcgtggcggc gtaatcacgc acttcctggc tgattttcat
    17221 cgagcagaat ttcggcccac acatggagca aaaatgggcg actttacctg actcttgcgg
    17281 cagggtttca tcgtgataag cgcgggcggt aaacgggtcg agggccagat taaactggtc
    17341 ttcccagcga aattcgaagc gggctttcga catggcgtta tcgcgaattt gcgcgcccgg
    17401 atgccctttc gccaggtcag cggcgtgggc ggcaatctta taggtgataa gcccctgctt
    17461 aacatcttct ttattaggca gacccagatg ctcttttggt gttacgtaac agagcatcgc
    17521 gcagccaaac cagccaatca tcgccgcacc aatccccgac gtgaagtggt catagcccgg
    17581 cgcaatatcg gtagttagcg gccccagagt gtaaaacggc gcttcgtggc agtgctctaa
    17641 ctcctcggtc atattgcggc ggatcatctg catcggcacg tggcctgggc cttcaatcat
    17701 cacctgcacg tcatattccc aggcaatttt ggtcagttcg cccagcgtat gcagctcggc
    17761 aaactgcgct tcatcgttgg cgtcctgaat agaaccgggg cgcagaccgt cgcccagcga
    17821 cagcgaaacg tcataagcgg cacagatttc acaaatttcg cggaagtgtt gatagaggaa
    17881 attttcctga tgatgggaga ggcaccattt cgccataatc gaaccgccgc gagagacgat
    17941 accggtcagg cgtttcgcgg tcatcggcac atagcgcaac agtacgcccg catggatagt
    18001 gaagtaatcc acaccttgct cggcctgttc cagcagcgtg tcgcggaacg cttcccaggt
    18061 aagatcttcg gcgatcccgt taaccttctc cagcgcctgg tagatcggca ctgtaccgat
    18121 cggcaccgga ctgttacgca aaatccactc gcgggtttcg tgaatatagc gaccggtgga
    18181 gagatccatc accgtatccg ctccccagcg cgtggaccat accagctttt ccacttcttc
    18241 ttcgatggaa gaggtgaccg ccgagttgcc gatattggcg ttaactttta ccaggaagtt
    18301 acggccaata atcatcggct ccgattccgg atgattaatg ttggccggga taatcgcacg
    18361 tccggcagca acttcatcac ggacaaattc cgcagtgata ttttccggca gacgtgcgcc
    18421 aaagctcatt cccggatgct ggtggcgtaa aacttcgcta cgtatgcgct cgcggcccat
    18481 attctcgcgg atggcgatga attccatttc cggtgtgatg atgccctggc gggcgtagtg
    18541 cagttgggtg acacggcgtc ctgctttggc gcgttttggt gttagtacgc cgctaaaacg
    18601 cagttcgtcg aggccatcat ctgccagccg cgctttagtg taatcggaac tgcgcacggt
    18661 aagttcttcg gtatcgccgc gcgcatcgat ccacggctgg cgtagttttg ccagcccttg
    18721 ctgcacgtta atggcgatct gcggatcgcc atatgggccg gaggtgtcgt agaccggaat
    18781 cgcttcgttt tcttcaaact gcggctgttc tttgctgccg ccgattagcg tcgggctaag
    18841 ctggatctca cgcatcggca cgcgaacgcc agagtgtgtg ccagtgaggt aaatgcgttt
    18901 tgagttggga aaggcggtgc cttccagggt gtcgataaaa tgttgggccc gggcgcgttg
    18961 ttcgcggcgg gtcagttttg ttgcagacat agctcattcc aaaaagttaa ggacgtggct
    19021 tgtcagacga cggatgaagc aagagacgat cgccgcaaag gcgatgcgat agcagattaa
    19081 ctcttgttcc cttcgcaggt attagcctga tcaggttccg cggatcccga ataaacggtc
    19141 tcagccagtt aaggcactcc gacaagaaat tagcccccac aaacggggcg ttgaatgtaa
    19201 attacgcgtt aacagcgcag aactcaagca ggatgtttga cgcgggcggc gtcaagcacc
    19261 agcagaatca gcttatcttc cagcacaaag cgcgcttcca gcgcctcgcc gatgtcagat
    19321 aaaacctttt gaaactcaag gtaattatca tgatcgatgg cggtttccag gctggaatcg
    19381 tagtaatcca taatctgttg ggtattggct tcgagttgcg gccaaatctt cgcggcgcgc
    19441 gcgagttgcc cgttgccttc cagcttatga agaatgcgct cataaatact gaaatgtccg
    19501 gcagacaagt aatcgaccag gctctgacaa aaatcatcaa gggctttttc gtttagcctc
    19561 atgtacgatt ctttgccagg cttaatgcca accagattgt agtaagccac gagcagatgc
    19621 ttacgtacat gtagccagcg atcaaccagt ttgttacttc ctctgacgcg ctccgtcagg
    19681 ttatcgagct ggttaagcat gattgactcc gcaagtttgt attcaaaaac tgctcagtga
    19741 gaaatgtaaa aaccatgtta aacatgccag tgatgcaaag gtagtgcaag agctatggat
    19801 cgtataattg aaaaattaga tcacggctgg tgggtcgtca gccatgaaca aaaattatgg
    19861 ttgccgaagg gagaattgcc atatggcgaa gcggcaaatt tcgatcttgt gggtcagcgc
    19921 gcactacaaa tcggcgaatg gcagggggaa cctgtttggt tagtacaaca gcagcggcgt
    19981 cacgatatgg ggtcggtacg tcaggtcatt gatctcgatg ttgtgctgtt tcaactggcc
    20041 ggacgaggcg tacaactggc ggagttttac cgatcgcata aatactgtgg ttactgcggg
    20101 catgaaatgt atccgagcaa aaccgaatgg gcgatgctgt gcagccattg ccgtgagcgt
    20161 tactacccgc aaatcgcccc ctgcattatt gttgccatcc gtcgcgatga ttcgatcctc
    20221 ctcgcccagc atacccgcca tcgtaacggt gtccatacag tacttgccgg attcgtcgaa
    20281 gtgggcgaaa ccctcgagca ggcagtcgcg cgggaagtga tggaagagag cggaattaaa
    20341 gttaaaaact tgcgttacgt gacttctcag ccgtggccgt ttcctcagtc tttaatgacc
    20401 gcgtttatgg cggaatatga cagcggcgac atcgtgatcg acccgaaaga attgctcgag
    20461 gcgaactggt atcgctatga cgatttgccg ttactcccgc cgcccggcac cgtagcgcgc
    20521 cgtctgatag aagatactgt ggcgatgtgt cgggcagagt atgagtgatg atacactgac
    20581 cgcctgacgc actaaggaac agccaaaatg accgaactta aaaacgatcg ttatctgcgg
    20641 gcgctgctgc gccagcccgt tgatgtcact ccagtatgga tgatgcgcca ggcgggtcgc
    20701 tatctaccgg aatataaagt cacgcgcgcc caggcgggcg attttatgtc gctgtgcaaa
    20761 aacgccgagc tggcgtgcga agtgactttg caaccgctgc gtcgctaccc gctggatgcg
    20821 gcgatcctct tttccgatat cctcaccgtg ccggacgcga tggggttagg gctctatttt
    20881 gaagccggag aaggtccgcg ttttacctcg ccagtcacct gcaaagccga cgtcgataag
    20941 ctgccaattc cggacccgga agatgagctg ggttacgtga tgaacgcggt gcgtaccatt
    21001 cgtcgcgaac tgaaaggcga agtgccgctg attggttttt ccggcagccc gtggacgctg
    21061 gcaacctaca tggtggaagg cggcagcagc aaagccttca ccgtgatcaa aaaaatgatg
    21121 tatgccgatc cgcaggcgct gcacgctcta ctcgataaac tggcgaaaag cgtcactttg
    21181 tatctgaatg cgcagattaa agccggtgct caggcagtga tgattttcga cacctggggc
    21241 ggtgtgctta ccgggcgcga ttatcaacag ttctcgctct attacatgca taaaattgtt
    21301 gatggtttac tgcgtgaaaa cgacggtcgc cgcgtaccgg tcacgctgtt taccaaaggc
    21361 ggcggacagt ggctggaagc gatggcagaa accggttgcg atgcgttggg cctcgactgg
    21421 acaacggata tcgccgatgc gcgccgccgt gtgggcaata aagtcgcgtt gcagggtaat
    21481 atggatccgt cgatgctgta cgcgccgcct gcccgcattg aagaagaagt agcgactata
    21541 cttgcaggtt tcggtcacgg cgaaggtcat gtctttaacc ttggtcacgg cattcatcag
    21601 gatgtgccgc cagaacatgc tggcgtgttc gtggaggcag tgcatcgact gtctgaacaa
    21661 tatcaccgct aaggagtgat tatggatctc gcgtcattac gtgctcaaca aatcgaactg
    21721 gcttcttctg tgatccgcga ggatcgactc gataaagatc caccggatct gatcgccgga
    21781 gccgatgtcg ggtttgagca gggcggagaa gtgacgcgag cggcgatggt gctgctgaaa
    21841 tatccctcgc ttgagctggt ggagtataaa gttgcccgca tcgccaccac catgccttac
    21901 attctaggtt ttctttcctt ccgcgaatat cctgcgctgc tggcagcgtg ggagatgctg
    21961 tcgcaaaagc cggatttagt gtttgtcgat ggtcatggga tctcgcatcc tcgccgtctt
    22021 ggcgtcgcca gccattttgg tttgatggtg gatgtgccaa cgatcggcgt ggcgaaaaaa
    22081 cggctctgcg gtaaattcga accgctctcc agcgaaccgg gcgcgctggc cccactgatg
    22141 gataaaggcg agcagctggc ctgggtctgg cgcagcaaag cgcgctgtaa cccgttgttt
    22201 atcgctaccg gccatcgggt cagcgtggac agcgcgctgg cgtgggtaca acgctgcatg
    22261 aaaggctatc gtctgccgga gccaacgcgc tgggcggacg cggtggcctc ggaacgtccg
    22321 gcgttcgtgc gctatacagc aaatcagccc taattcaggt aaactgcgga taatttccgt
    22381 atttgagaac ttaacatgtt acaaaaccca attcatctgc gtctggagcg cctggaaagc
    22441 tggcagcatg tcactttcat ggcttgctta tgcgaacgca tgtaccccaa ttacgccatg
    22501 ttctgccagc aaaccggttt tggtgatggg caaatttacc gtcgtattct cgatctcatc
    22561 tgggaaacgc tgaccgttaa agacgcaaaa gtaaatttcg acagccaact ggagaaattt
    22621 gaagaagcga ttccttcagc cgacgatttc gatctgtacg gcgtttatcc ggcaatcgat
    22681 gcctgcgtgg tgttaagtga actggtccat tcgcgtttga gtggtgaaac gctcgaacac
    22741 gcggtggaag tgagtaagac ctccatcacg accgttgcga tgctggaaat gactcaggtt
    22801 ggtcgcgaaa tgagcgatga agagcttaaa gaaaacccag ctgtagagca agaatgggac
    22861 attcagtggg aaatattccg acttttagct gagtgcgaag aacgcgatat cgagctgata
    22921 aaaggcctta gggcagacct gcgtgaggcg ggtgagagca atattggtat aatttttcag
    22981 caataagacc agaaaacgtg atttaacgcc tgatttgtcg tacctggagt cttccctttc
    23041 gccccccgtc tggtctacat ttggggggcg aaaaaaagtg gctatcggtg cgtgtatgca
    23101 ggagagtgct attctggcat ttccgtcgca ctcgatgctt agcaagcgat aaacacattg
    23161 taaggataac ttatgaacaa gactcaactg attgatgtaa ttgcagagaa agcagaactg
    23221 tccaaaaccc aggctaaagc tgctctggag tccactctgg ctgcaattac tgagtctctg
    23281 aaagaaggcg atgctgtaca actggttggt ttcggtacct tcaaagtgaa ccaccgcgct
    23341 gagcgtactg gccgcaaccc gcagaccggt aaagaaatca aaattgccgc agctaacgta
    23401 ccggcatttg tttctggcaa ggcactgaaa gacgcagtta agtaagattg cgtggcagtg
    23461 aacagtttta acgaaggggt ggtttcaccc cttttgtctt tctggcgtcg atcattgatg
    23521 ctggctggcg ctctgcttct cactgcctgt agtcataact cttcacttcc tccctttacc
    23581 gccagtggat ttgctgaaga ccagggcgcg gtacgcatct ggcgaaaaga cagcggcgat
    23641 aatgtgcatc tgcttgccgt gtttagcccg tggcgcagtg gcgataccac gacgcgagag
    23701 tatcgctggc agggcgataa cctcacgctc atcaatatca atgtttacag caaaccgccg
    23761 gtgaatattc gcgcgcgttt tgacgatcgc ggtgatctga gctttatgca acgtgaatcc
    23821 gatggggaaa agcagcagct ttctaacgac caaatcgatt tataccgtta tcgtgctgat
    23881 cagatccgcc agattagcga tgccttacgt caggggagag tcgtgctgcg ccaggggcgc
    23941 tggcatgcga tggaacagac cgtgaccacc tgcgaagggc aaaccattaa acctgattta
    24001 gattcgcagg cgatagcgca tatcgagcgc cgccagagcc gctcttctgt tgatgtcagc
    24061 gtggcatggc tggaagcgcc cgaaggttcg caattactgt tagtggcaaa ctctgatttc
    24121 tgtcgctggc aacccaacga gaaaacgttc tgatttacca gtggcccata cccatatgac
    24181 cgccaccacc gcagccgccg tagcccatgc ccattccggc tccgcgcgga atacccgctt
    24241 cagccatcgc gatatctcgt ttcacccgta actcatctaa cgactgacgc aaattctcca
    24301 tctctttggc gaccgcgtta attttgctgc tatccggtgg gttcgcggct aacagggcat
    24361 tgtattcata acgcttcgtc accagttgct gttgcagtgc gctgctttga gcgtaaaagt
    24421 cattatggat tttctgccac gctgtctgtt gttcgctggt caaaggcgcg gcattttgct
    24481 gccacatacc gtgtccgccg tgagcaaatg cagatgtcga tcccatcgcc attgctgaaa
    24541 gcgccatcat taccagggca attttcgtgt tccgtttcat ggttaatcct ccagtggttg
    24601 tcttacttcg ggtattgcat cttccgtgcc aacgatgaaa cgctgatatg acgggtaatc
    24661 tggcatgata aacgagtaaa aatgactcgc ctgctgcggg tagcgagtca tttttactca
    24721 ttgaaactta agcctttgtg ttacagcgca gggtaagcgc tgataaaaga tggcatgatt
    24781 tctgctgtca gaaagggatg agcaggcaaa gaagaagatg cgttttatgc aacgttctaa
    24841 agactcctta gctaaatggt taagcgcgat cctccccgtg gtcattgttg ggctggtagg
    24901 gttgtttgcg gtgacggtga ttcgcgatta tgggcgcgag actgccgccg ccagacaaac
    24961 gctgctggaa aaaggcagtg tacttattcg cgctcttgaa tccggctcgc gcgtcggcat
    25021 ggggatgcgc atgcatcatg cgcagcagca ggccttactg gaagaaatgg ccgggcagcc
    25081 tggagtacgt tggtttgcgg tcacggatga acaaggaaca atcgtgatgc atagcaactc
    25141 cggcatggtg ggaaaacagc tttattcccc gcaggaaatg cagcagttac atccgggaga
    25201 tgaagaagcg tggcggcgga tcgatagcgc agacggtgag cctgttctgg aaatttatcg
    25261 ccagtttcaa ccgatgtttg ctgctggaat gcaccggatg cgccatatgc agcagtatgc
    25321 cgcgacacca caagcaattt tcatcgcttt cgacgccagt aatattgtga gtgccgaaga
    25381 tcgtgagcag agaaacaccc tgattatcct cttcgccctg gcgacggtct tgctggcaag
    25441 cgtattgtca ttcttctggt atcgccgcta tctgcgctcg cgccagcttc tacaagatga
    25501 aatgaagcgc aaagagaagc tggtggcact ggggcatctg gcggcaggcg ttgcccacga
    25561 aatccgtaat ccactttcct caattaaagg gctggcgaaa tactttgccg aacgcgcgcc
    25621 agcaggggga gaagcgcatc aactggcgca ggtgatggcg aaagaagccg accgtttaaa
    25681 ccgcgtggta agcgagttgc tggaactggt taagccaacg catctggctt tgcaggcggt
    25741 ggatctcaac acgctgatta accactcatt acagctggta agccaggatg caaacagccg
    25801 ggagatccag ttacgcttta ccgccaacga cacattaccg gaaattcagg ccgatccgga
    25861 caggctgact caggtcctgt tgaatctcta tctcaatgct attcaggcga ttgttcagca
    25921 tggcgtgatt agcgtgacgg tcagcgaaag cggcgcgggc gtgaaaatca gcgttaccga
    25981 cagcggtaag ggaattgcgg cagatcagct tgaagccatc ttcactccgt acttcaccac
    26041 caaagccgaa ggcaccggat tggggctggc ggtcgtgcat aatattgttg aacaacacgg
    26101 tggtacaatt caggtcgcaa gccaggaggg aaaaggctca acgttcaccc tctggcttcc
    26161 ggtcaatatt acgcgtaagg acccacaagg atgacgcacg ataatatcga tattctggtg
    26221 gtggatgatg acattagcca ctgcactatt ttgcaggctt tactgcgcgg ctggggctat
    26281 aacgtcgcgc tggcgaacag cgggcgacag gcgctggagc aggtgcggga acaggttttt
    26341 gatcttgtgc tttgcgatgt gcgaatggcg gagatggacg gcatcgccac gctgaaagag
    26401 atcaaagcgt taaacccggc aattccggtg ctgattatga ctgcgtactc cagcgtcgag
    26461 acggcggtag aggcactgaa aactggggcg ctggattatc tcatcaagcc gctggatttc
    26521 gataacctac aggcgacgct ggaaaaggcg ctcgcgcata cgcacagtat tgatgctgaa
    26581 acacctgcgg tgactgccag ccagttcggt atggtcggta aaagcccggc gatgcaacac
    26641 ctgctcagtg aaatcgccct cgtcgcgcca tcggaagcca cagtgctgat ccacggcgat
    26701 tccggcaccg gtaaagagct ggtcgccagg gcgattcacg ccagtagcgc acgtagcgaa
    26761 aaaccgctgg taacgctcaa ctgtgcggca ctcaacgaat ccttgctgga atctgaattg
    26821 ttcggtcacg aaaaaggggc gtttactgga gccgataaac gccgggaagg gcgctttgtt
    26881 gaggcggacg gcggcacgct gtttctcgat gaaattggcg atatctcgcc gatgatgcag
    26941 gtgcgtctgc tgcgtgcgat tcaggagctc gaagttcagc gtgtcggtag caaccagact
    27001 atctcggttg atgtccggct gattgcggcg acccatcgcg atcttgccgc agaggtgaat
    27061 gccgggcgtt ttcgccagga tctctactat cgcctgaatg tggtggcgat tgaagtacca
    27121 tcgctgcggc aacggcggga agatatccct ctgctggctg gccattttct gcagcgcttt
    27181 gccgagcgta atcgcaaggc ggtaaaaggt tttacgcccc aggcgatgga tctgttgatt
    27241 cattacgact ggccgggaaa tattcgtgag ctggaaaacg cggtggaacg ggcagtggtg
    27301 ctgctgccgg ggaatatatt tccgaacgcg agctgccgct ggcgattgcc agtacgccga
    27361 tcccgctggg gcaaagtcag gatattcagc cgctggtgga agtggaaaaa gaggtgattc
    27421 tggcggcact ggagaaaacg ggcggcaaca aaactgaagc cgcccgtcag ttagggatca
    27481 cgcgtaaaac gttattggca aaactgtcgc gttagttctg ctcgcgttcg atagcacgcc
    27541 agccgatatc tttccggcag aagcagtcgt cccagtggat atcggtcatt aaggcatagg
    27601 cgcgtttctg cgcttctgcc acggtatgac ccagcgcggt gacgcacagt acgcgcccgc
    27661 cgttggtcac tacctgctcg tcatccgcca gttttgtgcc cgcgtggaac actttgccgc
    27721 ctgccacttc ttccagcagc aggccgtgga tcacgtcacc ggtgcggtaa tcacccggat
    27781 atccacccgc agccatcacc acgccgagag aagcgcgttc atcccactcg gacgttttct
    27841 cgtccagttt gctttcacag gccgccaggc agagctcaac cagatcggac ttcatgcgca
    27901 gcataatcgg ctgggtttcc ggatcgccaa agcggcagtt aaattcaata accttcggat
    27961 tgccctgttt gtcgatcatc aggcccgcgt agagaaaacc ggtgtaggtg ttgccttccg
    28021 ccgccatgcc tttcacggtt ggccagataa tacgttccat ggtgcgctga tgaacgtcat
    28081 cggttactac cggcgcgggg gagtaagcgc ccatcccgcc ggtgtttggt ccggtatctt
    28141 tatcgcctac gcgtttgtga tcctggctgg tagccatcgg cagcacatgc tcgccgtcca
    28201 ccatcacgat aaagctcgct tcttcgccat cgaggaactc ttcgataacg atgcgatgac
    28261 ccgcgtcgcc aaaagcgttg cccgccagca tatcgtgaac agccgcttcc gcttcttcca
    28321 gcgtcatcgc cacgataacg cctttcccgg cagccagacc gtccgcttta atgacgattg
    28381 gcgcgccttt ctcacgcaga tacgccagcg caggttctac ctcggtgaag ttctggtatt
    28441 ccgccgtagg gatcttatgg cgggccagga aatctttggt aaacgctttt gagccttcca
    28501 gttgggccgc acctgcggtt gggccgaaga ttttcagccc ggcggcgcgg aaggtatcga
    28561 ccacgccttt caccagcggc gcttccgggc cgacgatggt cagatcaatc ttttcgtttt
    28621 gtgcgaaatc caacagcgcc gggatatcgg tcacgccaat agcaacgttt tgcagcgcgg
    28681 gttccagcgc agtgcctgca ttacccggag caacaaaaac agtctcaacc agcggcgact
    28741 gggccgcttt ccaggccagc gcgtgctcgc gcccgccgtt accaatcact aatactttca
    28801 tctattgctc cattaatggc ggaagtggcg catgtcggtg aagagcatcg caataccgtg
    28861 ctcgtcggcg gcggcaatca cttcgtcatc acggatggaa ccgccaggct ggattacgca
    28921 ggtcacgccc gcagcggcgg cggcatcaat accgtcgcgg aacgggaaga acgcgtcaga
    28981 agccatcgag gaacctttca cttccaggcc ttcatcggca gctttaatac cggcgatttt
    29041 cgcggagtac acgcggctca tctggcccgc gccaataccg atggtcatat tgtttttggc
    29101 atagacgata gcattggatt tcacgaactt cgccactttc cagcagaaca gcgcatcgcg
    29161 cagttcctgt tcggtcggct gacgttgggt gacgacgcgc agttcttccg caccgaccat
    29221 ccccaggtca cgatcctgaa ccagcagacc gccgttcacg cgtttgaaat caagacccgg
    29281 aacacgctcg ccccactgac cgcaggtcag aacgcgtacg ttctgcttgg cggcggtgat
    29341 tttcagggct tcttcgctgg cggaaggcgc aataatcact tcgacaaact gacgagaaat
    29401 gatggcctgt gcggtttccg catctagctc gcggttaaag gcaatgatgc cgccgaatgc
    29461 ggaggttggg tcggttttgt acgcgcgatc gtaagcatca agaatggaat tgccgatagc
    29521 tacaccgcaa gggttggcgt gcttcacaat cacacatgcc ggctcggcga actctttcac
    29581 gcactccagc gccgcatcgg tatcggcgat gttgttataa gagagggctt taccctgaac
    29641 ctgggttgcg gtagcaacgg aggcttcttt cacattctct tctatataga aggcagcctg
    29701 ctggtggctg ttctcgccgt aacgcatatc ctgcttctta atgaagttca ggttcagcgt
    29761 gcgtgggaag cgaccggcgg cttctttgct ttcaccgtgg tacgccggaa ccatgctgcc
    29821 gaagtagttg gcaatcatgc tgtcgtaggc ggcagtgtgt tcgaaggctt tgatggcgag
    29881 gtcgaaacgg gttgcaagcg tcagcgatcc ttcgttgtca tccatctctt taataatggc
    29941 gtcgtagtcg ctgctcttca ccacgattgc gacatcttta tggttcttag cggcggagcg
    30001 caccatggtc gggccgccga tatcgatgtt ctcaaccgca tcttccagcg agcagccttc
    30061 acgagcaaca gtctgggcga acggatacag gttaacaacc accatatcga taggctggat
    30121 ctgatgttct tccataatgg catcgtcctg gccgcgacgg cccagaatgc caccatgtac
    30181 tttcggatgc agggtcttca cgcgtccatc catcatctcc gggaaaccgg tgtaatcgga
    30241 aacttcggtt accggcagac ctttttctgc taacagacgg gcagtgcccc ctgtagacag
    30301 cagctccaca ccgcgtgcgg aaagtgcctg ggcgaattcg acgataccgg ctttgtcaga
    30361 aacactgagc agagcgcggc ggactggacg acgttgttgc atggtaaatc ccctggattt
    30421 gactattaca gagagcgtta gctgaatttt tcgcgaaaaa ctcagctaac gcccctaacg
    30481 gggcatcctt atttttcgcc cgcattgtaa cgaaaacgtt tgcgcaacgc tcgcgaattt
    30541 ttctctttca atggtgatca caattttgac agtggctacc gtgggaaaaa tacagaaatt
    30601 acattgatga ttgtggataa ctctgtgcgt aaaaaggtat aaagcggggt tttgctgggg
    30661 aatgcagcag tcagtcattt ttctgcaatt tttctattgc ggcctgcgga gaactcccta
    30721 taatgaacct ccatcgacac ggcggatgtg aatcacttca cacaaacagc cggttcggtt
    30781 gaagagaaaa atcctgaaat tcagggttga ctctgaaaga ggaaagcgta atatacgcca
    30841 cactcacgac agtgcgctaa agctcgtcgc aactgctctt taacaattta tcagacaatc
    30901 tgtgtgggta ctcgaagata cggattctta acgtcgcaag ac
//
LOCUS       DADKRT010000028        30401 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.028, whole genome shotgun sequence.
ACCESSION   DADKRT010000028 DADKRT010000000
VERSION     DADKRT010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 30401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30401
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.028"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            718..2571
                     /locus_tag="JQ356_001082"
     CDS             718..2571
                     /locus_tag="JQ356_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY4621246.1"
                     /translation="MAFKHYDVVRAASPSDLAKQLTQKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGDVVVSGATEPEWYYVIVLAGQSNAMAYGEGLPLPDSYDAPHPRIKQLARRN
                     TVTPGGEVCVFNDIIPADHCLHDVQDMSTINHPRADLSKGQYGCVGQGLHIAKKLLPY
                     IPNNAGILLVPCCRGGSAFTQGTEGTFSESTGASQDSARWGVGKPLYQDLLFRTKAAL
                     QKNPKNVLLAICWMQGEFDMTNASYAQQPAAFLAMVQQFRADLAGLAAQCHGGSPASV
                     PWICGDTTYAWKQEHGTQYEVVYGAYKGKESQQIYFVPFMTDGSGVNTPTNNPSEDPD
                     IAGSGYYGSASRTNKNWVSSNRPTHFSSWARRGIIPDRMATAILNVAGRTLAFISGKA
                     PEIKPSPGGDTPSGPSEDASVRTISLLPTAGDAAAQGWSIKNGGIQLSDGVFKITKQS
                     NKAWSLTRPVDDAVSLLTRGGRLSCKFRLSGALTNNQFGLGIYLYTDVALPDVVAMTG
                     TGNPFLMSFFTQTTDGKLNLMHHKKAGNTKLGEFGNYSNDWQTLELVFTAGSATVTPK
                     LNGVAGPAFQVIKDSLTVGLNALTLTDITKNATYGVEIESLVLEINAPASS"
     gene            2721..2936
                     /locus_tag="JQ356_001083"
     CDS             2721..2936
                     /locus_tag="JQ356_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY4621247.1"
                     /translation="MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGS
                     LLFGLLTYLTNLYFKIREDRRKAARGE"
     gene            2941..3291
                     /locus_tag="JQ356_001084"
     CDS             2941..3291
                     /locus_tag="JQ356_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HAY4621248.1"
                     /translation="MTQNYKLIVKGIRNFENKVTVTLALRDKKRFDGEIFDLDISLDR
                     VEGAALEFYEAAARRSIRQVFLDVAAGLCEGDEQSPEKRPVILEAQNVWITYKGKLPG
                     RITGSLKTPPESQP"
     gene            3355..3888
                     /locus_tag="JQ356_001085"
     CDS             3355..3888
                     /locus_tag="JQ356_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY4621249.1"
                     /translation="MNAKIRYGLSAAVLALIAAGAPAPDILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDGKPVVPGMKLSKEKCDRVNAIERDKALAWVEKNIRVPLSEPQK
                     AGIASFCPYNIGPGKCFPSTFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VSRRDQESALACWGIDR"
     gene            4187..4624
                     /locus_tag="JQ356_001086"
     CDS             4187..4624
                     /locus_tag="JQ356_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HAY4621250.1"
                     /translation="MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKEQRDKATSTI
                     ADMQKRQRDVAELDARYTKELADANATIESLRADVSAGRKRLQVAATCAKSTTGASGM
                     GNGESPRLTADAELNYYRLRSGIDKITAQVNYLQEYIRTQCLK"
     gene            5041..5661
                     /locus_tag="JQ356_001087"
     CDS             5041..5661
                     /locus_tag="JQ356_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000654791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7726 family protein"
                     /protein_id="HAY4621251.1"
                     /translation="MKDQDVRFAVHHKLLKESHLDPDCLVVDEFSISLGASRADIAVI
                     NGVIHGYELKSEYDSLERLPLQIKHYSSVMDKVTLVVAEKHLEGALKLIPGWWGVKTV
                     SVGPKGAILIKHMRGEKLNRNHDTLMLAQLLWKDECIDVLERWGYSKGIKSKPRFELW
                     NIIAENIPIANLRLEVRTALKKRVGWKVKAWQAESAPTNKAVSRLT"
     gene            complement(5603..6670)
                     /locus_tag="JQ356_001088"
     CDS             complement(5603..6670)
                     /locus_tag="JQ356_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001383880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621252.1"
                     /translation="MSQHQYYPQLKWKPAEYESLMLLDQTTLSGFTPIITIPDIDWDY
                     ENECYKKSLSSYLSDFGINLAASWKANRPVLLDVKYLDKHGSSRHHPLDMCIQDARVN
                     GKEIIPVVSPAYSTNYIHAVQRNLINGLAISITPQTWHQFTSLVNHLNIHPSLIDVII
                     DFGDIQNATDSLKQQALSMVNTLSGQAPWRNLILSSTAYPASQAGIPQHQVHHIPRHE
                     YDLWMYVVQNFSNGRTPSFSDYPTASSTITSVDPRFMSQYVSVRYSNDTSWIFVKGTA
                     VKGNGWGQTKNLCTTLVSSPEYQVFGSKFSWGDDYIYQRSLGANKSGGSKEWRKVAHT
                     HHITLVVRQLYWLAQTQPAKP"
     gene            7083..7628
                     /locus_tag="JQ356_001089"
     CDS             7083..7628
                     /locus_tag="JQ356_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-packaging protein"
                     /protein_id="HAY4621253.1"
                     /translation="MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSA
                     AVIKWYAERDAEIENEKLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNA
                     RDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN
                     KAAALDELIPGLLSEYIEQSG"
     gene            7603..9528
                     /locus_tag="JQ356_001090"
     CDS             7603..9528
                     /locus_tag="JQ356_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HAY4621254.1"
                     /translation="MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKES
                     AYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTL
                     IWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKHRDNTLTMKRFTNGRGFWCLG
                     GKAAKNYREKSVDVAGYDELAAFDEDIEQEGSPTFLGDKRIEGSVWPKSIRGSTPKVR
                     GTCQIERAASESPHFMRFHVACPHCGEEQYLKFGDKETPFGLKWTPDDPSSVFYLCEH
                     NACVIRQQELDFTDARYICEKTGIWTRDGILWFSSSGEEIEPPDSVTFHIWTAYSPFT
                     TWVQIVKDWMKTKGDTGKRKTFVNTTLGETWEAKIGERPDAEVMAERKEHYSAPVPDR
                     VAYLTAGIDSQLDRYEMRVWGWGPGEESWLIDRQIIMGRHDDEQTLLRVDEAINKTYT
                     RRNGAEMSISRICWDTGGIDPTIVYERSKKHGLFRVIPIKGASVYGKPVASMPRKRNK
                     NGVYLTEIGTDTAKEQIYNRFTLTPEGDEPLPGAVHFPNNPDIFDLTEAQQLTAEEQV
                     EKWVDGRKKILWDSKKRRNEALDCFVYALAALRISISRWQLDLSALLASLQEEDGAAT
                     NKKTLADYARALSGEDE"
     gene            9525..9731
                     /locus_tag="JQ356_001091"
     CDS             9525..9731
                     /locus_tag="JQ356_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lambda prophage-derived head-to-tail joining
                     protein W"
                     /protein_id="HAY4621255.1"
                     /translation="MTRQEELAAARAALHDLMTGKRVATVQKDGRRVEFTATSVSDLK
                     KYIAELEVQTGMTQRRRGPAGFYV"
     gene            9728..11329
                     /locus_tag="JQ356_001092"
     CDS             9728..11329
                     /locus_tag="JQ356_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HAY4621256.1"
                     /translation="MKTSTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRAWNPPSES
                     VDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIVGSFFRLSHRPSWRYLGIGEE
                     EARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTS
                     SSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQK
                     WTWIPRELPGGRASFIHVFEPVEDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKA
                     MYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAPVRLGGAKVPHLM
                     PGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANES
                     WAYFMGRRKFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGS
                     GRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRGDDYQEIFAQQVRETMERRAAGLKPP
                     AWAAAAFESGLRQSTEEEKSDSRAA"
     gene            11310..12629
                     /locus_tag="JQ356_001093"
     CDS             11310..12629
                     /locus_tag="JQ356_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HAY4621257.1"
                     /translation="MTAELRNLPHIASMAFNEPLMLEPAYARVFFCALAGQLGISRLT
                     DAVSGDSLTAQEALATLALSGDDDGPRQARSYQVMNGIAVLPVSGTLVSRTRALQPYS
                     GMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALA
                     NDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHK
                     VDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVLDTEAAVYSGQEAID
                     AGLADELVNSTDAITVMRDALDARKSRLSGGRMTKETQSTTVSATASQADVTDVVPAT
                     EGENASAAQPDVNAQITAAVAAENSRIMGILNCEEAHGREEQARVLAETPGMTVKTAR
                     RILAAAPQSAQARSDTALDRLMQGAPAPLAAGNPASDAVNDLLNTPV"
     gene            12639..12971
                     /locus_tag="JQ356_001094"
     CDS             12639..12971
                     /locus_tag="JQ356_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HAY4621258.1"
                     /translation="MTSKETFTHYQPQGNSDPAHTATAPGGLSAKAPAMTPLMLDTSS
                     RKLVAWDGTTDSAAVGILAVAADQTSTTLTFYKSGTFRYEDVLWPEAASDETKKRTAF
                     AGTAISIV"
     gene            13027..14052
                     /locus_tag="JQ356_001095"
     CDS             13027..14052
                     /locus_tag="JQ356_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HAY4621259.1"
                     /translation="MSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQI
                     PGLVNMALYVSPIVSGEVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLA
                     DPAYRRRRIIMQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAAN
                     NITQSGSTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVREKL
                     DTRRGSHSELETAVKDLGKAVSYKGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGN
                     TQARGLRTYGCIQDADAQREGINASARYPKNWVTTGDPAREFTMIQSAPLMLLADPDE
                     FVSVQLA"
     gene            14094..14489
                     /locus_tag="JQ356_001096"
     CDS             14094..14489
                     /locus_tag="JQ356_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-packaging protein FI"
                     /protein_id="HAY4621260.1"
                     /translation="MTKDELIVRLRSLGEQLNRDVSLTGTKEELALRVAELEEELDDT
                     DDAAGQDTPLRPENALTGHENEVVSAQTDTVTDAAALVTVVALVTLHTDALHATRDEP
                     VAFVLPETAFRVSAGVAAEMTERGLARMQ"
     gene            14501..14854
                     /locus_tag="JQ356_001097"
     CDS             14501..14854
                     /locus_tag="JQ356_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621261.1"
                     /translation="MADFDNLFDAAIARADETIRGYMGTSATMTSGEQSGAVIRGVFD
                     DPENISYAGQGVRVEGSSPSLFVRTDEVRQLRRGDTLTIGEENFWIDRISPDDGGSCH
                     LWLGRGVPPAVNRRR"
     gene            14866..15444
                     /locus_tag="JQ356_001098"
     CDS             14866..15444
                     /locus_tag="JQ356_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621262.1"
                     /translation="MAIKGLEQAVENLSRISKTAVPGAAAMAINRVASSAISQSASQV
                     ARETKVRRKLVKERARLKRATVKNPQARIKVNRGDLPVIKLGNARVVLSRRRRRKKGQ
                     RSSLKGGGSVLVVGNRRIPGAFIQQLKNGRWHVMQRVAGKNRYPIDVVKIPMAVPLTT
                     AFKQNIERIRRERLPKELGYALQHQLRMVIKR"
     gene            15441..15836
                     /locus_tag="JQ356_001099"
     CDS             15441..15836
                     /locus_tag="JQ356_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621263.1"
                     /translation="MKHTELRAAVLDALEKHDTGATLFDGRPAVFDEEDFPAIAVYLT
                     GAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSM
                     VASGYDYRRDDDAGLWSSADLTYVITYEM"
     gene            15844..16584
                     /locus_tag="JQ356_001100"
     CDS             15844..16584
                     /locus_tag="JQ356_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621264.1"
                     /translation="MPVPNPTMPVKGAGTTLWVYKGSGDPYANPLSDVDWSRLAKVKD
                     LTPGELTAESYDDSYLDDKDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNE
                     GDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTA
                     ATGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKG
                     VAAGKVNIPVVSGNGELAVVAEITVTDS"
     gene            16600..17022
                     /locus_tag="JQ356_001101"
     CDS             16600..17022
                     /locus_tag="JQ356_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HAY4621265.1"
                     /translation="MFLKTESFEYNGVSVTLSELSALQRIEHLALLKRQAEQAGSSLN
                     RQVSVEDLVRTGAFLVAMSLWHSHPQKTKMPSMNEAVKQIEQEVLTTWPTEAIAQAEN
                     VVMRLSGMSEFVVNDAPEQADDAGPAEPVSAGKCSTVS"
     gene            17004..17438
                     /locus_tag="JQ356_001102"
     CDS             17004..17438
                     /locus_tag="JQ356_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
                     /protein_id="HAY4621266.1"
                     /translation="MFDGELSFALKLAREMGRPDWRAMLAGMSSTEYADWHRFYSIHY
                     FHDVLLDMHFSGLTYTVLSLFFSDPDMHPLDFSLLNRREADEEPEDDVLMQKAAGLAG
                     GVRFGPDGNEVIPASPDVADMTEDDVMLMTVSEGIAGGVRYG"
     gene            17431..19992
                     /locus_tag="JQ356_001103"
     CDS             17431..19992
                     /locus_tag="JQ356_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY4621267.1"
                     /translation="MAEPVGDLVVDLSLDAARFDEQMARVRRHFSGTESDAKKTAAVV
                     EQSMNRQALAAQKVGISVGQYKAAMRMLPAQFTDVATQLAGGQSPWLILLQQGGQVKD
                     SFGGMIPMFRGLAGAITLPMVGATSLAVATGALAYAWYQGNSTLSDFNKTLVLSGNQA
                     GLTADRMLVLSRAGQAAGLTFNQTSESLSALVKAGVSGEAQIASISQSVARFSSASGV
                     EVDKVAEAFGKLTTDPTSGLTAMARQFHNVTAEQIAYVAQLQRSGDEAGALQAANEAA
                     TKGFDDQTRRLKENMGTLETWADRTARAFKSMWDAVLDIGRPDTAQEMLIKAEAAFKK
                     ADDIWNLRKDDYFVNDEARARYWDDREKARLALEAARKKAEQQTQQDKNAQQQSDTEA
                     SQLKYTEEAQKAYERLQTPLEKYTARQEELNKALKDGKILQADYNTLMAAAKKDYEAT
                     LKKPKQSGVKVSAGDRQEDSAHAALLTLQAELRTLEKHAGANEKISQQRRDLWKAESQ
                     FAVLEEAAQCRQLSAQEKSLLAHKDETLEYKRQLAALGDKVTYQERLNALAQQADKFA
                     QQQRAKRAAIDAKSRGLTDRQAEREATEQRLKEQYGDNPLALNNVMSEQKKTWAAEDQ
                     LRGNWMAGLKSGWSEWEESATDSMSQVKSAATQTFDGIAQNMAAMLTGSEQNWRSFTR
                     SVLSMMTEILLKQAMVGIVGSIGSAIGGAVGGGASASGGTAIQAAAAKFHFATGGFTG
                     TGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYATGGYVGTPGSMADSRSQAS
                     GTFEQNNHVVINNDGTNGQIGPAALKAVYDMARKGARDEIQTQMRDGGLFSGGGR"
     gene            19989..20318
                     /locus_tag="JQ356_001104"
     CDS             19989..20318
                     /locus_tag="JQ356_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621268.1"
                     /translation="MKTFRWKVKPGMDVASVPSVRKVRFGDGYSQRAPAGLNANLKTY
                     SVTLSVPREEATVLESFLEEHGGWKSFLWTPPYEWRQIKVTCAKWSSRVSMLRVEFSA
                     EFEQVVN"
     gene            20318..21016
                     /locus_tag="JQ356_001105"
     CDS             20318..21016
                     /locus_tag="JQ356_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HAY4621269.1"
                     /translation="MQDIRQETLNECTRAEQSASVVLWEIDLTEVGGERYFFCNEQNE
                     KGEPVTWQGRQYQPYPIQGSGFELNGKGTSTRPTLTVSNLYGMVTGMAEDMQSLVGGT
                     VVRRKVYAHFLDAVNFVNGNSYADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDG
                     AVFPGRIMLANTCTWTYRGDECGYSGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNV
                     GNFGGFLSINKLSQ"
     gene            21022..21765
                     /locus_tag="JQ356_001106"
     CDS             21022..21765
                     /locus_tag="JQ356_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621270.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVSTPEGERYFPCVNISGEPE
                     AYFRMSPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGTIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFYREDDWWRNGQNLYLDNLEAT
                     GLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHRAWRASAFTGIYNDLVAASTFV"
     gene            21702..22334
                     /locus_tag="JQ356_001107"
     CDS             21702..22334
                     /locus_tag="JQ356_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY4621271.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGS
                     FFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKARTPRTQTTDNGKQN
                     TCFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            22395..25793
                     /locus_tag="JQ356_001108"
     CDS             22395..25793
                     /locus_tag="JQ356_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY4621272.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVEGPVDGLKS
                     VLLNSTPVLDSEGNTNISGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRFTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVDNLPPRPFSIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGSQKVSRNYHLRGRVLQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCL
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAWLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNAVEVNWIDPDNGWETATELVEDTQAILRYGRNVTKMDAFGCTSRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISIGGRVLAVNSQTRTLTLD
                     REITLPSSGTTLISLVDGSGNPVSVEVQSVTDGVKVKVSRVPDGVAGYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTAETTYRFTQ
                     LALGRYTLTVRAVNAWGQQGDPASVSFRIAAPVAPSRIELTPGYFQITATPHLAVYDP
                     TVQFEFWFSETRITDIRQVETTARYLGAGLYWIAASINIKPGHDYYFYIRSVNTVGKS
                     AFVEAVGRASDDAEGYLDFFKGKITESHLGKELLEKVDLTEDNASRLDEFSKEWKDAN
                     DKWNAMWGVKIEQTKDGKHYVAGIGLSMEDTEEGKLSQFLVAANRIAFIDPANGNETP
                     MFVAQGNQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGKLTAKNADISGNVNANSGT
                     LNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTNSYASGTITVRISDDQKFDRQV
                     MIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMP
                     AGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS"
     gene            25860..26459
                     /locus_tag="JQ356_001109"
     CDS             25860..26459
                     /locus_tag="JQ356_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY4621273.1"
                     /translation="MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHARTNVPG
                     SDDLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQITRYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKKHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDVAYEGSGSGDWRTDGFIVGVGYKF"
     gene            26524..29547
                     /locus_tag="JQ356_001110"
     CDS             26524..29547
                     /locus_tag="JQ356_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621274.1"
                     /translation="MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPD
                     EAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSRPGTLNDFLGAMTEDDARPEA
                     LRRFELMVEEVARNASVVAQNTAAAKKSASDASTSAREAATHATDAAGSARAASTSAG
                     QAASSAQSATSSAGTASTKATEASKSAAAAESSKSAAATSASAAKTSETNAAASQQSA
                     ATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKT
                     SETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSA
                     STATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSASSSASS
                     ASASKDEATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAE
                     DIASAVALEDASTTKKGIVQLSSATNSTSESLAATPKAVKAAYDLANGKYTAQDATTA
                     QKGIIQLSSATNSTSETLAATPKAVKAANDNAEKRLQKDQNGADIPGKDTFTKNIGAC
                     RAFGGSVSTTTGNWTTAQFIEWLDSQGAFNHPYWMCKGSWSYGNNKIITDTGCGNIHL
                     AGAVIEVMGIKSAMTIRITTPTTSTGGGTTNAQFTYINHGTDYSPGWRRDYNSRNKPT
                     ASEIGALPSGGTAVSSVNLSSKGRVTALTDNTQGATGLELYEVYNNGYPTAYGNIIHL
                     KGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVG
                     APIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASDRAVL
                     SQEQDGIKSHTHSASVSSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGAHTH
                     SMTFVSGGSSGAPGSGSPDYSKYSVNTSSAGAHTHSVSGTAASAGAHAHTVGIGAHTH
                     SVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA"
     gene            29547..30131
                     /locus_tag="JQ356_001111"
     CDS             29547..30131
                     /locus_tag="JQ356_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000885581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4621275.1"
                     /translation="MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTD
                     IAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSP
                     EGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEE
                     TSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE"
     gene            complement(30186..>30401)
                     /locus_tag="JQ356_001112"
     CDS             complement(30186..>30401)
                     /locus_tag="JQ356_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HAY4621276.1"
                     /translation="DGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLT
                     HILSEHFENVKTKVQGTVVMFSASGKK"
BASE COUNT         7389 a         7499 c         9011 g         6502 t
ORIGIN      
        1 ctgtgccgga tacatcacag tttctggaac cttaggtact acagtatcag tcagggtgct
       61 atattttcag atgtgatgaa agcctgtcag caggcagggc gtatcggaaa tgacccagta
      121 gagaaaacgt tgactcagat accggtgctg agttaccggg aaaccggcat cacatgaccg
      181 ctatccttcc aggcccatcc gctccggtgg gcctttttac tgcagaaaac aggttccccg
      241 ttaaatgcta tgttgctcac aattcagtaa gttgacagtt gcctgtcaga ctgggcattt
      301 gttaaaaaaa tttcgcatgg tgaatccccc tgagcggagg ggcgactggt gacggtataa
      361 tctctgatta tcaaaacgag aatgacgcgg gtttagtggc accgggctga actcaccggg
      421 aggcacccgg caccatgtgc atgatgatac agatacgcgg ctttagcccc tctccggagg
      481 ggctttctta tggacaaaaa aagcccgcgc tgggagacgc gggcggcaag gaataaacaa
      541 taaaacgtga agtaatattt cagctggcga ataatacccc atagtaatca ctctgcgcaa
      601 ctgcgcggtc tttttcgaat tgcgggctgt agtctccctt ctgccattgt cctgtaactt
      661 ccggacttca gcctgctcct tatctgactc acaacattat cccgcccggg aggattcatg
      721 gcatttaaac actatgacgt ggtcagggcg gcatcgccgt cagaccttgc gaaacaactg
      781 acacaaaaac tgaaggaggg ctggcagccg tttggtagtc cggtggccat aaccccttat
      841 accctgatgc aggcgattgc agcagaaggt gatgtggtcg tcagtggtgc aactgagccg
      901 gagtggtact acgtcatcgt actggccggg caatccaatg ccatggctta cggtgaaggg
      961 cttccgcttc cggattcata cgatgcgccc catccgcgca ttaagcaact ggcccgtcgt
     1021 aacacagtga ctcccggtgg tgaagtatgc gtatttaacg acatcattcc tgctgaccat
     1081 tgtctgcatg atgttcagga tatgagtacg attaaccatc cccgggctga cctgagcaaa
     1141 gggcagtacg gctgtgtcgg acagggctta catattgcca aaaaactgct tccgtatatc
     1201 cctaataatg cggggatcct gctggtacca tgctgtcgtg gtggttcggc attcacccag
     1261 ggcacggagg ggacattcag cgagtccacg ggagccagtc aggattcggc tcgctgggga
     1321 gtgggtaagc cgttatatca ggatctgctt ttccgcacga aggcagcatt gcagaaaaac
     1381 ccgaaaaacg ttttgctggc gatatgctgg atgcaggggg aattcgatat gacgaatgcc
     1441 agttacgccc agcagccagc agcatttctt gcaatggtac agcagttccg tgctgacctt
     1501 gccgggctgg cagcgcagtg tcacggtgga agtccggcat cagtcccctg gatttgtggc
     1561 gacacgacat acgcgtggaa acaagaacac ggtacgcaat atgaagtggt atatggtgca
     1621 tataaaggta aagaatccca gcagatttat tttgttccct ttatgaccga tggtagcgga
     1681 gttaatacac cgacaaacaa cccgtcagaa gatcctgata ttgccgggtc tggttattac
     1741 ggttcggcat cccgaacgaa caaaaactgg gtatcatcaa atcgcccgac gcatttcagc
     1801 tcatgggcgc gtcgtggcat tattcccgat cgtatggcaa ctgctattct gaacgtagcc
     1861 ggtcgcacct tagccttcat tagtggtaag gcaccggaaa tcaaaccctc gcccggcggc
     1921 gacacgccat cggggccgtc tgaagatgca tccgtacgca caatctccct gttgccgaca
     1981 gccggagatg ctgctgcgca gggctggagc attaagaatg gcggaattca gttgtcagat
     2041 ggtgtattta agatcaccaa gcagagcaat aaagcctggt ccctgacgcg cccggtggat
     2101 gacgcagtct ccctgctgac acggggtggc agactgagct gtaagtttcg actgtcaggc
     2161 gcactgacca acaaccagtt cggtctggga atttatctgt ataccgatgt agcgttacct
     2221 gacgtcgtgg cgatgaccgg gactggtaac ccgttcctga tgtcgttctt cacccagacc
     2281 acagacggca aactgaatct gatgcatcac aagaaagccg gaaacacaaa gttgggcgag
     2341 ttcgggaatt acagtaacga ctggcagacg ctggagctgg tgttcaccgc cggcagtgcc
     2401 acggttactc cgaaactgaa tggagtggct ggcccggcat tccaggtcat aaaagacagt
     2461 ctgacagtgg gactaaatgc actgacgctg acggatatta ccaaaaatgc aacgtatggc
     2521 gttgagatag aaagtctggt gctggagata aatgcaccgg catcatcata aaaagtgagc
     2581 cagtcaaatg gaaggtatcg ttaaactcac cggtagtgtc agtgggtcgt ctgagacgcc
     2641 tgcatgagtt atcagagcca tcagtactta actggtggct tttttattgt tgtcagcttc
     2701 cggataacgg gagacggggt atgtaccaga tggaaaaaat cacaacaggt gtgtcataca
     2761 ccacgtcagc ggtgggaacg ggctactggt tcctgcagtt gctggacagg gtttccccgt
     2821 ctcagtgggc ggcaataggc gtgctgggga gtctgctgtt tgggctgctg acatatctga
     2881 ctaacctgta tttcaaaatc agagaggacc gtcgtaaggc tgcacgggga gagtaattca
     2941 atgactcaaa actataaact gattgtgaaa gggatccgca attttgagaa taaagttacg
     3001 gtaactttag cgttacggga caaaaaacgc tttgacggtg aaatttttga cctggacatc
     3061 tcgctggacc gtgttgaagg tgccgcgctg gagttttatg aggcagcagc cagaaggagc
     3121 atcagacagg tcttcctgga tgttgctgcc gggttatgtg aaggggatga gcagtcgccg
     3181 gaaaagcgcc ccgtaatttt agaggcgcag aatgtatgga taacctacaa aggaaagcta
     3241 ccgggaagaa ttactggttc tctgaagact cctccggaat cacaacctta agtcactgac
     3301 cggaacagat aaacctgtcc gtgggcagaa accgataaat cctgataaat atccatgaac
     3361 gcaaaaatca gatacggcct gtcggctgcc gttctggcgc tgattgccgc tggtgcgcct
     3421 gcgcctgaca ttctcgacca gtttctggat gaaaaggaag gtaaccacac cacggcatac
     3481 cgtgatggcg cgggtatctg gaccatctgc cgcggtgcca tcctggtgga tggcaaacct
     3541 gtcgttccgg gcatgaagtt gtcgaaggaa aaatgcgacc gggttaacgc cattgagcgt
     3601 gataaggcgc tggcatgggt ggagaaaaac atcagagtgc cattgagtga accccagaaa
     3661 gcggggatcg cgtcattctg tccgtacaac attggccccg gtaagtgttt tccgtcgacg
     3721 ttttataaac gaattaatgc aggtgatcgc aggggagcgt gtgaggcgat tcgctggtgg
     3781 attaaggacg gtggcagaga ctgccgtatt cgctcaaaca actgttacgg tcaggtatcc
     3841 cgtcgcgacc aggagagtgc gctggcgtgc tggggaattg acagataagc agaatatttt
     3901 gctgaaaaat gcggtttgct cacacggacg gataacacga aatcctgcga actgacaaaa
     3961 actaagagaa taaaagtaaa aaccccgttt gttggctgca agcggggttt tgtgtttcct
     4021 gactccggaa aagtcaaagg agaaagtgtg tttgatttta gcaaactgat tcgggagatt
     4081 cgagtgatgg ctgaaaaatt atccacctgg aagttcattc ttatctggct ggtgtttgtg
     4141 attatggcct ccggttattt catcggtcag atacgctggt ggtgaaatga accgcgtact
     4201 gtgcgtggtc atcattgccc tgctggtggc ctgtggtgcg cttagtctgg ggctgaatca
     4261 ttaccgtgat aacgccataa cctacaaaga gcagcgcgat aaagccacat ccacaatcgc
     4321 tgatatgcag aagcgtcaac gtgacgtagc agaactcgat gccagatata caaaggagct
     4381 tgctgatgct aacgcgacta tcgaaagcct ccgtgctgat gtttctgctg ggcgtaagcg
     4441 cctgcaagtc gccgctacct gtgcaaagtc aacgaccgga gccagcggca tgggcaatgg
     4501 agaaagccca agacttacag cagatgctga actcaattat taccgtctcc gaagtggaat
     4561 cgacaagata accgcgcagg tcaactacct gcaggagtac atcaggacgc agtgcttaaa
     4621 ataattttaa tttcactgaa atttaatacg tgactttcag gaaaatgcct cgcagatgcg
     4681 gggcattttt gtacaggtat ttcaccgcgc accgcagtgc actcaaccac gtcgaaccaa
     4741 accctttgga atgagccttt gagtagtcag ttagtgctgg tgagccttga cgggctgatc
     4801 tcctatgcag caaaggttca tctcaaagta aggcgaacgc tatgacaaac caagattcta
     4861 tagacctatc tgatcttcgt ggaatggtca gttttccaga caaaaggtaa tcaccatagt
     4921 cgtatggcta tgaatcttgt tgctgcagat aagcattttg tgattgaagt ggtcaaatct
     4981 ctcaaatgca gtaaaatgca gtgcgctata attcaataac ggagggagta aggagaagtc
     5041 atgaaagatc aagatgttag gttcgcggtg catcataagc ttttgaaaga atcgcattta
     5101 gatccagact gccttgtggt cgatgaattt tccatatccc ttggcgccag tagagcagac
     5161 attgctgtaa taaatggtgt tatacacggg tacgagctca aaagtgaata tgactctttg
     5221 gagcgtttgc ctcttcaaat caagcattat tcttctgtaa tggacaaggt tactcttgtc
     5281 gtagctgaga aacatcttga gggagcatta aagttaatcc caggttggtg gggcgttaaa
     5341 acggtttctg ttgggccaaa aggcgccatt cttataaagc acatgcgtgg agaaaagctt
     5401 aatcgaaacc atgacacatt gatgctcgct caattgcttt ggaaagatga atgtatcgac
     5461 gtacttgaac gatggggcta ttccaaagga atcaaaagca agccccgatt tgagttatgg
     5521 aatattattg cggaaaatat tccaatagcg aatctcaggc ttgaagtcag aacagcctta
     5581 aagaaacgcg taggctggaa agttaaggct tggcaggctg agtctgcgcc aaccaataaa
     5641 gctgtctcac gactaacgta atatggtgcg tatgtgcaac tttacgccat tctttagagc
     5701 cgccagattt gttagcgcct aatgatcttt ggtaaatgta atcatccccc caactaaatt
     5761 tggaaccaaa gacttgatac tctggcgaac taacaagggt agtacataag tttttagttt
     5821 ggccccatcc atttccttta actgcggtac cttttacaaa gatccatgag gtatcgttcg
     5881 aatatctcac tgagacatac tgagacatga agcgtgggtc tacgctcgta atggtagagc
     5941 tagcggtggg ataatcacta aaacttggcg ttcttccatt gctaaaattc tgtactacgt
     6001 acatccaaag atcgtattca tggcgcggaa tatgatgaac ttgatgttgc ggtatccctg
     6061 cctgtgatgc tgggtatgcg gttgaagata aaatcaagtt tctccacgga gcttggcctg
     6121 ataatgtgtt gaccatgctt aatgcttgtt gttttaaact atcagttgcg ttttgaatat
     6181 ctccaaaatc aatgattaca tcaattaaac taggatgaat atttaagtgg ttaaccagac
     6241 ttgtgaattg gtgccatgtc tggggggtga tagatatagc gagcccattg attaagttgc
     6301 gttgaacagc atgtatatag tttgttgaat atgcgggaga aacaacaggg ataatttcct
     6361 taccatttac tctagcatct tggatacaca tatctagagg atgatggcgg ctcgaaccat
     6421 gtttatctaa atatttaaca tccagcaaaa caggacgatt ggctttccag gatgccgcaa
     6481 ggttaatacc gaagtcagat aagtaagaac tcaaactctt cttgtagcat tcgttttcat
     6541 aatcccagtc tatgtctgga atggtaatga tcggagtaaa accagagagc gtagtttgat
     6601 ctaaaagcat cagagattca tattcagcag gcttccattt cagctgtgga taatattgat
     6661 gttgactcat taaaactcct taaaatcttt acttatccta agtatagtgt tatggcgtaa
     6721 cgccaattgt ttttatacac ttgaaaacat tgggaaaagt tgagctatat ctaaatttac
     6781 aaaattggat gttatagaaa tcgaggtttc aactaggcat ggaactgcaa aatttttaat
     6841 gcctgcacgc gaaagtcgtt ggcgggtcct ttccggtgat ccagaccgtt acggggcggc
     6901 gacctcgcgg gttttcgcta tttatgaaaa ttttccggtt taaggcgttt ccgttcttct
     6961 tcgtcgtaac ttaatgtttt tatttaaaat accccctgaa aagaaaggaa acgacaggtg
     7021 ctgaaaacga acttttgggc ctttgtcgtt tcctttctct gtttttggcc gtggaatgaa
     7081 caatggaagt caacaaaaag cagctggctg acattttcgg tgcgagtatc cgtaccattc
     7141 agaactggca ggaacaggga atgcccgttc tgcgaggcgg tggcaagggt aatgaggtgc
     7201 tttatgactc tgccgccgtt ataaaatggt atgccgaaag ggatgctgaa attgagaacg
     7261 aaaagctgcg ccgggaggtt gaagaactgc gccaggccag cgaggcagat ctccagccag
     7321 ggactattga gtacgaacgc catcgactta cgcgtgcgca ggccgacgca caggaactga
     7381 agaatgccag agactcagct gaagtggtgg aaaccgcatt ctgtactttc gtgctgtcgc
     7441 ggatcgcagg tgaaattgcc agtattctcg acgggatccc cctgtcggtg cagcggcgtt
     7501 ttccggaact ggaaaaccga catgttgatt tcctgaaacg ggatatcatc aaagccatga
     7561 acaaagcagc cgcgctggat gaactgatac cggggttgct gagtgaatat atcgaacagt
     7621 caggttaaca ggctgcggca ttttgtccgc gccgggcttc gctcactgtt caggccggag
     7681 ccacagaccg ccgttgaatg ggcggatgct aattactatc tcccgaaaga atccgcatac
     7741 caggaagggc gctgggaaac actgcccttt cagcgggcca tcatgaatgc gatgggcagc
     7801 gactacatcc gtgaggtgaa tgtggtgaag tctgcccgtg tcggttattc caaaatgctg
     7861 ctgggtgttt atgcctactt tatagagcat aagcagcgca acacccttat ctggttgccg
     7921 acggatggtg atgccgagaa ctttatgaaa acccacgttg agccgactat tcgtgatatt
     7981 ccgtcgctgc tggcgctggc cccgtggtat ggcaaaaagc accgggataa cacgctcacc
     8041 atgaagcgtt tcactaatgg gcgtggcttc tggtgcctgg gcggtaaagc ggcaaaaaac
     8101 taccgtgaaa agtcggtgga tgtggcgggt tatgatgaac ttgctgcctt tgatgaggat
     8161 attgaacagg aaggctctcc gacgttcctt ggcgacaaac gtattgaagg ctcggtctgg
     8221 ccaaagtcca tccgtggctc cacgcccaaa gtgagaggca cctgccagat tgagcgtgca
     8281 gccagtgaat ccccgcattt tatgcgtttt catgttgcct gcccgcactg cggggaggag
     8341 cagtatctta aatttggcga caaagagacg ccgtttggcc tcaaatggac gccggatgac
     8401 ccctccagcg tgttttatct ctgcgagcat aatgcctgcg tcatccgcca gcaggagctg
     8461 gactttactg atgcccgtta tatctgcgaa aagaccggga tctggacccg tgatggcatt
     8521 ctctggtttt cgtcatccgg tgaagagatt gagccacctg acagtgtgac ctttcacatc
     8581 tggacagcgt acagcccgtt caccacctgg gtgcagattg tcaaagactg gatgaaaacg
     8641 aaaggggata cgggaaaacg taaaaccttc gtaaacacca cgctcggtga gacgtgggag
     8701 gcgaaaattg gcgaacgtcc ggatgctgaa gtgatggcag agcggaaaga gcattattca
     8761 gcgcccgttc ctgaccgtgt ggcttacctg accgccggta tcgactccca gctggaccgc
     8821 tacgaaatgc gcgtatgggg atgggggccg ggtgaggaaa gctggctgat tgaccggcag
     8881 attattatgg gccgccacga cgatgaacag acgctgctgc gtgtggatga ggccatcaat
     8941 aaaacctata cccgccggaa tggtgcagaa atgtcgatat cccgtatctg ctgggatact
     9001 ggcgggattg acccgaccat tgtgtatgaa cgctcgaaaa aacatgggct gttccgggtg
     9061 atccccatta aaggggcatc cgtctacgga aagccggtgg ccagcatgcc acgtaagcga
     9121 aacaaaaacg gggtttacct taccgaaatc ggtacggata ccgcgaaaga gcagatttat
     9181 aaccgcttca cactgacgcc ggaaggggat gaaccgcttc ccggtgccgt tcacttcccg
     9241 aataacccgg atatttttga tctgaccgaa gcgcagcagc tgactgctga agagcaggtc
     9301 gaaaaatggg tggatggcag gaaaaaaata ctgtgggaca gcaaaaagcg acgcaatgag
     9361 gcgctcgact gcttcgttta tgcgctggcg gcgctgcgca tcagtatttc ccgctggcag
     9421 ctggatctca gtgcactgct ggcgagcctg caggaagagg atggtgcagc aaccaacaag
     9481 aaaacactgg cagattacgc ccgtgcctta tccggagagg atgaatgacg cgacaggaag
     9541 aacttgccgc tgcccgtgcg gcactgcatg acctgatgac aggaaaacgg gtggcaacgg
     9601 tacagaaaga cggacggaga gtggagttta cggccacttc cgtgtctgac ctgaaaaaat
     9661 acattgcgga gctggaagtg cagaccggca tgacacagcg acgcagggga cctgcaggat
     9721 tttatgtatg aaaacgtcca ccattcccac ccttctgggg ccggacggca tgacatcgct
     9781 gcgtgaatat gccggttatc acggcggtgg cagcggattt ggagggcagt tgcgggcgtg
     9841 gaacccaccg agtgaaagtg tggatgcagc cctgctgccc aactttaccc gtggcaatgc
     9901 ccgcgcagac gatctggtac gcaataacgg ctatgccgcc aacgccatcc agttgcatca
     9961 ggatcatatc gtcgggtctt ttttccggct cagtcatcgc ccaagctggc gctatctggg
    10021 catcggggag gaagaagccc gtgccttttc ccgcgaggtt gaagcggcat ggaaagagtt
    10081 tgccgaggat gactgctgct gcattgacgt tgagcgaaaa cgcacgttta ccatgatgat
    10141 tcgggaaggt gtggccatgc acgcctttaa cggtgaactg ttcgttcagg ccacctggga
    10201 taccagttcg tcgcggcttt tccggacaca gttccggatg gtcagcccga agcgcatcag
    10261 caacccgaac aataccggcg acagccggaa ctgccgtgcc ggtgtgcaga ttaatgacag
    10321 cggtgcggcg ctgggatatt acgtcagcga ggacgggtat cctggctgga tgccgcagaa
    10381 atggacatgg ataccccgtg agttacccgg cgggcgcgcc tcgttcattc acgtttttga
    10441 acccgtggag gacgggcaga ctcgcggtgc aaatgtgttt tacagcgtga tggagcagat
    10501 gaagatgctc gacacgctgc agaacacgca gctgcagagc gccattgtga aggcgatgta
    10561 tgccgccacc attgagagtg agctggatac gcagtcagcg atggatttta ttctgggcgc
    10621 gaacagtcag gagcagcggg aaaggctgac cggctggatt ggtgaaattg ccgcgtatta
    10681 cgccgcagcg ccggtccggc tgggaggcgc aaaagtaccg cacctgatgc cgggtgactc
    10741 actgaacctg cagacggctc aggatacgga taacggctac tccgtgtttg agcagtcact
    10801 gctgcggtat atcgctgccg ggctgggtgt ctcgtatgag cagctttccc ggaattacgc
    10861 ccagatgagt tactccacgg cacgggccag tgcgaacgag tcgtgggcgt actttatggg
    10921 gcggcgaaaa ttcgtcgcat cccgtcaggc gagccagatg tttctgtgct ggctggaaga
    10981 ggccatcgtt cgccgcgtgg tgacgttacc ttcaaaagcg cgcttcagtt ttcaggaagc
    11041 ccgcagtgcc tgggggaact gcgactggat aggctccggt cgtatggcca tcgatggtct
    11101 gaaagaagtt caggaagcgg tgatgctgat agaagccgga ctgagcacct acgagaaaga
    11161 gtgcgcgaaa cgcggtgacg actatcagga aatttttgcc cagcaggtcc gtgaaacgat
    11221 ggagcgccgt gcagccggtc ttaaaccgcc cgcctgggcg gctgcagcat ttgaatccgg
    11281 gctgcgacaa tcaacagagg aggagaagag tgacagcaga gctgcgtaat ctcccgcata
    11341 ttgccagcat ggcctttaat gagccgctga tgcttgaacc cgcctatgcg cgggttttct
    11401 tttgtgcgct tgcaggccag cttgggatca gccgcctgac ggatgcggtg tccggcgaca
    11461 gcctgactgc ccaggaggca ctcgcgacgc tggcattatc cggtgatgat gacggaccac
    11521 gacaggcccg cagttatcag gtcatgaacg gcatcgccgt gctgccggtg tccggcacgc
    11581 tggtcagccg gacgcgggcg ctgcagccgt actcggggat gaccggttac aacggcatta
    11641 tcgcccgtct gcaacaggct gccagcgatc cgatggtgga cggcattctg ctcgatatgg
    11701 acacgcccgg cgggatggtg gcgggggcat ttgactgcgc tgacatcatc gcccgtgtgc
    11761 gtgacataaa accggtatgg gcgcttgcca acgacatgaa ctgcagtgca ggtcagttgc
    11821 ttgccagtgc cgcctcccgg cgtctggtca cgcagaccgc ccggacaggc tccatcggcg
    11881 tcatgatggc tcacagtaat tacggtgctg cgctggagaa acagggtgtg gaaatcacgc
    11941 tgatttacag cggcagccat aaggtggatg gcaaccccta cagccatctt ccggatgacg
    12001 tccgggagac actgcagtcc cggatggacg caacccgcca gatgtttgcg cagaaggtgt
    12061 cggcatatac cggcctgtcc gtgcaggctg tgctggatac cgaggctgca gtgtacagcg
    12121 gtcaggaggc cattgatgcc ggactggctg atgaacttgt taacagcacc gatgcgatca
    12181 ccgtcatgcg tgatgcactg gatgcacgta aatcccgtct ctcaggaggg cgaatgacca
    12241 aagagactca atcaacaact gtttcagcca ctgcttcgca ggctgacgtt actgacgtgg
    12301 tgccagcgac ggagggcgag aacgccagcg cggcgcagcc ggacgtgaac gcgcagatca
    12361 ccgcagcggt tgcggcagaa aacagccgca ttatggggat cctcaactgt gaggaggctc
    12421 acggacgcga agaacaggca cgcgtgctgg cagaaacccc cggtatgacc gtgaaaacgg
    12481 cccgccgcat tctggccgca gcaccacaga gtgcacaggc gcgcagtgac actgcgctgg
    12541 atcgtctgat gcagggggca ccggcaccgc tggctgcagg taacccggca tctgatgccg
    12601 ttaacgattt gctgaacaca ccagtgtaag ggatgtttat gacgagcaaa gaaaccttta
    12661 cccattacca gccgcagggc aacagtgacc cggctcatac cgcaaccgcg cccggcggat
    12721 tgagtgcgaa agcgcctgca atgaccccgc tgatgctgga cacctccagc cgtaagctgg
    12781 ttgcgtggga tggcaccacc gacagtgctg ccgttggcat tcttgcggtt gctgctgacc
    12841 agaccagcac cacgctgacg ttctacaagt ccggcacgtt ccgttatgag gatgtgctct
    12901 ggccggaggc tgccagcgac gagacgaaaa aacggaccgc gtttgccgga acggcaatca
    12961 gcatcgttta actttaccct tcatcactaa aggccgcctg tgcggctttt tttacgggat
    13021 ttttttatgt cgatgtacac aaccgcccaa ctgctggcgg caaatgagca gaaatttaag
    13081 tttgatccgc tgtttctgcg tctctttttc cgtgagagct atcccttcac cacggagaaa
    13141 gtctatctct cacaaattcc gggactggta aacatggcgc tgtacgtttc gccgattgtt
    13201 tccggtgagg ttatccgttc ccgtggcggc tccacctctg aatttacgcc gggatatgtc
    13261 aagccgaagc atgaagtgaa tccgcagatg accctgcgtc gcctgccgga tgaagatccg
    13321 cagaatctgg cggacccggc ttaccgccgc cgtcgcatca tcatgcagaa catgcgtgac
    13381 gaagagctgg ccattgctca ggtcgaagag atgcaggccg tttctgccgt gctcaagggc
    13441 aaatacacca tgaccggtga agccttcgat ccggttgagg tggatatggg ccgcagtgcg
    13501 gcgaacaaca tcacgcagtc cggcagcacg gagtggagca agcgtgacaa gtccacgtat
    13561 gacccgaccg acgatatcga agcctacgcg ctgaacgcca gcggcgtggt gaatatcatc
    13621 gtgtttgatc cgaaaggctg ggcgctgttc cgttccttca aagccgtcag ggagaagctg
    13681 gatacccgtc gcggctctca ttccgagctg gagacagcgg tgaaagacct gggtaaagcg
    13741 gtgtcctata aggggatgta tggcgatgtg gccatcgtcg tgtattccgg acagtacgtg
    13801 gaaaacggcg tcaaaaagaa cttcctgccg gacaacacga tggtactggg gaacactcag
    13861 gcacgcggtc tgcgcaccta tggctgcatt caggatgcgg acgcacagcg cgaaggcatt
    13921 aacgcctctg cccgttaccc gaaaaactgg gtgaccaccg gcgatccggc gcgtgagttc
    13981 accatgattc agtcagcacc gctgatgctg ctggctgacc ctgatgagtt cgtgtccgta
    14041 caactggcgt aatcgtggcc cttcggggcc attttctctc tgtggaggag tccatgacga
    14101 aagatgaact gattgtccgt ctccggtcgc tgggtgagca actgaaccgt gatgtcagcc
    14161 tgacggggac gaaagaagaa ctggcgctcc gtgtggcaga gctggaagag gagcttgatg
    14221 acacggatga cgctgccggt caggataccc ctctcagacc ggaaaatgcg ctgaccggac
    14281 atgaaaatga ggtggtatca gcacagacgg ataccgtgac tgatgcggct gctctggtca
    14341 cggttgtggc actggtgacg ctgcataccg atgcacttca cgccacgcgg gatgaacctg
    14401 tggcatttgt gctgccggaa acggcgttcc gtgtctctgc cggtgtggca gctgaaatga
    14461 cagagcgcgg cctggccaga atgcaataac gggaggcgct gtggctgatt tcgataacct
    14521 gttcgatgct gccattgccc gcgccgatga aacgatacgc gggtacatgg gaacgtcagc
    14581 caccatgaca tccggtgagc agtccggcgc agtaatacgt ggtgtttttg atgaccctga
    14641 aaatatcagc tatgccggac agggcgtacg cgttgaaggc tccagcccgt ccctgtttgt
    14701 ccggactgat gaggtgcggc agctgcggcg cggcgacacg ctgaccatcg gtgaggaaaa
    14761 cttctggata gaccggattt cgccggatga tggcggaagc tgtcatctct ggcttgggcg
    14821 gggcgtaccg cctgccgtta accgtcgccg ctgaaagggg gatgtatggc cataaaaggt
    14881 cttgagcagg ccgttgaaaa cctcagccgt atcagtaaaa cggcggtgcc cggtgccgcc
    14941 gcaatggcca ttaaccgcgt tgcttcatcc gcgatatcgc agtcggcgtc acaggttgct
    15001 cgtgagacaa aggtacgccg gaaactggta aaggaaaggg ccaggctgaa aagggccacg
    15061 gtcaaaaatc cgcaggccag aatcaaagtt aaccgggggg atttgcccgt aatcaagctg
    15121 ggtaatgcgc gggttgtcct ttcgcgccgc aggcgtcgta aaaaggggca gcgttcatcc
    15181 ctgaaaggtg gcggcagcgt gcttgtggtg ggaaaccgtc gtattcccgg cgcgtttatt
    15241 cagcaactga aaaatggccg ctggcatgtc atgcagcgtg tggccgggaa aaaccgttac
    15301 cccattgatg tggtgaaaat cccgatggcg gtgccgctga ccacggcgtt taaacagaat
    15361 attgaacgga tacggcgtga acgtcttccg aaagagctgg gctatgcgct gcagcatcaa
    15421 ctgagaatgg taataaagcg atgaaacata ctgaactccg tgcagccgta ctggatgcac
    15481 tggagaagca tgacaccggg gcgacgcttt ttgatggtcg ccccgctgtt tttgatgagg
    15541 aagattttcc ggcaattgcc gtttatctca ccggcgctga atacacgggc gaagagctgg
    15601 acagcgatac ctggcaggcg gagctgcata ttgaagtttt cctgcctgct caggtgccgg
    15661 attcagagct ggatgcgtgg atggagtccc ggatttatcc ggtgatgagc gatatcccgg
    15721 cactgtcaga tttgatcacc agtatggtgg ccagtggcta tgactaccgg cgcgacgatg
    15781 atgcgggcct gtggagttca gccgatctga cttatgtcat tacctatgaa atgtgaggac
    15841 gctatgcctg taccaaatcc tacaatgccg gtgaaaggtg ccgggaccac cctgtgggtt
    15901 tataagggga gcggtgaccc ttatgcgaac ccgctttcag acgttgactg gtcgcgtctg
    15961 gcaaaagtta aagacctgac gcccggcgaa ctgaccgctg agtcctatga cgacagctat
    16021 ctcgatgata aagatgcaga ctggactgcg accgggcagg ggcagaaatc tgccggagat
    16081 accagcttca cgctggcgtg gatgcccgga gagcaggggc agcaggcgct gctggcgtgg
    16141 tttaatgaag gtgatacccg tgcctataaa atccgcttcc cgaacggcac ggtcgatgtg
    16201 ttccgtggct gggtcagcag tatcggtaag gcggtgacgg cgaaggaagt gattacccgc
    16261 acggtgaagg tcaccaatgt gggacgtccg tcgatggcag aagatcgcag cacggtaaca
    16321 gcggcaaccg gcatgaccgt gacgcctgcc agcacttcgg tggtgaaagg gcagagcacc
    16381 acgctgaccg tggcattcca gccggaaggc gcaaccgaca agagcttccg tgcggtgtct
    16441 gcggataaaa caaaagccac cgtgtcggtc agtggtatga ccatcaccgt gaaaggtgtt
    16501 gctgcaggca aggtcaacat tccggttgta tccggtaatg gtgaacttgc tgtggttgca
    16561 gaaatcaccg tcaccgacag ttaatccgga gagtcagcga tgttcctgaa aaccgaatca
    16621 tttgaatata acggtgtgag cgtcacgctt tctgaactgt cagccctgca gcgaattgag
    16681 catctcgccc tgctgaaacg acaggcagaa caggcgggat ccagtctcaa tcgacaggtg
    16741 agcgtggaag atctcgtcag aaccggtgct tttctggtgg cgatgtccct gtggcatagc
    16801 catccgcaga agacaaagat gccgtccatg aatgaagccg ttaaacaaat tgagcaggaa
    16861 gtgcttacca cctggcccac agaggcaatt gctcaggctg aaaatgtggt aatgcgtctg
    16921 tccggtatgt ctgagtttgt tgtgaatgat gcacctgaac aggcagatga cgccgggcca
    16981 gcagagcctg tttctgcggg aaagtgttcg acggtgagct gagttttgcc ctgaaactgg
    17041 cgcgtgagat ggggcgaccc gactggcgcg ccatgcttgc cgggatgtca tccacggagt
    17101 atgccgactg gcaccgcttt tacagtatcc attattttca tgatgttctg ctggatatgc
    17161 acttttccgg gctgacgtac accgtactca gcctgttttt cagcgatccg gatatgcatc
    17221 cgctggattt cagtctgctg aaccggcgcg aggctgacga agagcctgaa gatgatgtgc
    17281 tgatgcagaa agcggcaggg cttgccggag gcgtccgctt tggcccggac gggaatgaag
    17341 ttatccccgc ttccccggat gtggcggaca tgacggagga tgacgtaatg ctgatgacag
    17401 tatcagaagg gatcgcagga ggagtccggt atggctgaac cggtaggcga tctggtcgtt
    17461 gatttgagtc tggatgcggc cagatttgac gagcagatgg ccagagtcag gcgtcatttt
    17521 tccggtacgg aaagtgatgc gaaaaaaaca gcggcagtcg ttgaacagtc gatgaaccgg
    17581 caggcgctgg ctgcacagaa agtgggaatt tccgtcgggc agtataaagc cgccatgcgt
    17641 atgctgcctg cgcagttcac tgacgtggcc acgcagcttg caggcgggca aagtccgtgg
    17701 ctgatcctgc tgcaacaggg ggggcaggtg aaggactcct tcggcgggat gatccccatg
    17761 ttccgggggc ttgccggtgc gatcaccctg ccgatggtgg gggccacctc gctggcggtg
    17821 gcgaccggag cgctggcgta tgcctggtat cagggcaact caaccctgtc cgatttcaac
    17881 aaaacgctgg tcctttccgg caatcaggcg ggactgacgg cagatcgtat gctggtcctg
    17941 tccagagccg ggcaggcggc agggctgacg tttaaccaga ccagcgagtc actcagcgca
    18001 ctggttaagg cgggggtaag cggtgaggct cagattgcgt ccatcagcca gagtgtggcg
    18061 cgtttctcct ctgcatccgg cgtggaggtg gacaaggtcg ctgaagcctt cgggaagctg
    18121 accacagacc cgacgtcggg gctgacggcg atggcacgcc agttccataa cgtgacggcg
    18181 gagcagattg cgtatgttgc tcagttgcag cgttccggcg atgaagccgg ggcattgcag
    18241 gcggcgaacg aggccgcaac gaaagggttt gatgaccaga cccgacgcct gaaagagaac
    18301 atgggcacgc tggaaacctg ggcagacagg acagcacggg cattcaaatc catgtgggat
    18361 gcggtgctgg atattggtcg tcctgatacc gctcaggaga tgctgattaa ggcagaggct
    18421 gcgtttaaga aagcagacga catctggaat ctgcgcaagg atgattattt tgttaacgat
    18481 gaagcgcggg cgcgttactg ggatgatcgt gaaaaggccc gtcttgcgct tgaagccgcc
    18541 cgaaagaagg ctgagcagca gactcaacag gacaaaaatg cgcagcagca gagcgatact
    18601 gaagcgtcac agctgaaata taccgaagag gcgcagaagg cttacgaacg gctgcagacg
    18661 ccgctggaga aatataccgc ccgtcaggaa gaactgaaca aggcactgaa agacgggaaa
    18721 atcctgcagg cggattacaa cacgctgatg gcggcggcga aaaaggatta tgaagcgacg
    18781 ctgaaaaagc cgaaacagtc cggcgtgaag gtgtctgcgg gcgatcgtca ggaagacagt
    18841 gctcatgctg ccctgctgac gcttcaggca gaactccgga cgctggagaa gcatgccgga
    18901 gcaaatgaga aaatcagcca gcagcgccgg gatttgtgga aggcggagag tcagttcgcg
    18961 gtactggagg aggcggcgca atgtcgccag ctgtctgcac aggagaaatc cctgctggcg
    19021 cataaagatg agacgctgga gtacaaacgc cagctggctg cacttggcga caaggttacg
    19081 tatcaggagc gcctgaacgc gctggcgcag caggcggata aattcgcaca gcagcaacgg
    19141 gcaaaacggg ccgccattga tgctaaaagc cgggggctga ctgaccggca ggcagaacgg
    19201 gaagccacgg aacagcgcct gaaggaacag tatggcgata atccgctggc gctgaataac
    19261 gtcatgtcag agcagaaaaa gacctgggcg gctgaagacc agcttcgcgg gaactggatg
    19321 gcaggcctga agtccggctg gagtgagtgg gaagagagcg ccacggacag tatgtcgcag
    19381 gtaaaaagtg cagccacgca gacctttgat ggtattgcac agaatatggc ggcgatgctg
    19441 accggcagtg agcagaactg gcgcagcttc acccgttccg tgctgtccat gatgacagaa
    19501 attctgctta agcaggcaat ggtggggatt gtcgggagta tcggcagcgc cattggcggg
    19561 gctgttggtg gcggcgcatc cgcgtcaggc ggtacagcca ttcaggccgc tgcggcgaaa
    19621 ttccattttg caaccggagg atttacggga accggcggca aatatgagcc agcggggatt
    19681 gttcaccgtg gtgagtttgt cttcacgaag gaggcaacca gccggattgg cgtggggaat
    19741 ctttaccggc tgatgcgcgg ctatgccacc ggcggttatg tcggtacacc gggcagcatg
    19801 gcagacagcc ggtcgcaggc gtccgggacg tttgagcaga ataaccatgt ggtgattaac
    19861 aacgacggca cgaacgggca gataggtccg gctgctctga aggcggtgta tgacatggcc
    19921 cgcaagggtg cccgtgatga aattcagaca cagatgcgtg atggtggcct gttctccgga
    19981 ggtggacgat gaagaccttc cgctggaaag tgaaacccgg tatggatgtg gcttcggtcc
    20041 cttctgtaag aaaggtgcgc tttggtgatg gctattctca gcgagcgcct gccgggctga
    20101 atgccaacct gaaaacgtac agcgtgacgc tttctgtccc ccgtgaggag gccacggtac
    20161 tggagtcgtt tctggaagag cacgggggct ggaaatcctt tctgtggacg ccgccttatg
    20221 agtggcggca gataaaggtg acctgcgcaa aatggtcgtc gcgggtcagt atgttgcgtg
    20281 ttgagttcag cgcagagttt gaacaggtgg tgaactgatg caggatatcc ggcaggaaac
    20341 actgaatgaa tgcacccgtg cggagcagtc ggccagcgtg gtgctctggg aaatcgacct
    20401 gacagaggtc ggtggagaac gttatttttt ctgtaatgag cagaacgaaa aaggtgagcc
    20461 ggtcacctgg caggggcgac agtatcagcc gtatcccatt caggggagcg gttttgaact
    20521 gaatggcaaa ggcaccagta cgcgccccac gctgacggtt tctaacctgt acggtatggt
    20581 caccgggatg gcggaagata tgcagagtct ggtcggcgga acggtggtcc ggcgtaaggt
    20641 ttacgcccat tttctggatg cggtgaactt cgtcaacgga aacagttacg ccgatccgga
    20701 gcaggaggtg atcagccgct ggcgcattga gcagtgcagc gaactgagcg cggtgagtgc
    20761 ctcctttgta ctgtccacgc cgacggaaac ggatggcgct gtttttccgg gacgtatcat
    20821 gctggccaac acctgcacct ggacctatcg cggtgacgag tgcggttata gcggtccggc
    20881 tgtcgcggat gaatatgacc agccaacgtc cgatatcacg aaggataaat gcagcaaatg
    20941 cctgagcggt tgtaagttcc gcaataacgt cggcaacttt ggcggcttcc tttccattaa
    21001 caaactttcg cagtaaatcc catgacacag acagaatcag cgattctggc gcacgcccgg
    21061 cgatgtgcgc cagcggagtc gtgcggcttc gtggtaagca cgccggaggg ggaaagatat
    21121 tttccctgcg tgaatatctc cggtgagccg gaggcgtatt tccgtatgtc gccggaagac
    21181 tggctgcagg cagaaatgca gggtgagatt gtggcgctgg tccacagcca ccccggtggt
    21241 ctgccctggc tgagtgaggc cgaccggcgg ctgcaggtgc agagtgattt gccgtggtgg
    21301 ctggtctgcc gggggacgat tcataagttc cgctgtgtgc cgcatctcac cgggcggcgc
    21361 tttgagcacg gtgtgacgga ctgttacaca ctgttccggg atgcttatca tctggcgggg
    21421 attgagatgc cggactttta tcgtgaggat gactggtggc gtaacggcca gaatctctat
    21481 ctggataatc tggaggcgac ggggctgtat caggtgccgt tgtcagcggc acagccgggc
    21541 gatgtgctgc tgtgctgttt tggttcatca gtgccgaatc acgccgcaat ttactgcggc
    21601 gacggcgagc tgctgcacca tattcctgaa caactgagca aacgagagag gtacaccgac
    21661 aaatggcagc gacgcacaca ctccctctgg cgtcaccggg catggcgcgc atctgccttt
    21721 acggggattt acaacgattt ggtcgccgca tcgaccttcg tgtgaaaacg ggggctgaag
    21781 ccatccgggc actggccaca cagctcccgg cgtttcgtca gaaactgagc gacggctggt
    21841 atcaggtacg gattgccggg cgggacgtca gcacgtccgg gttaacggcg cagttacatg
    21901 agactctgcc tgatggcgct gtgattcata ttgttcccag agtcgccggg gccaagtcag
    21961 gtggcgtatt ccagattgtc ctgggggctg ccgccattgc cggatcattc tttaccgccg
    22021 gagccaccct tgcagcatgg ggggcagcca ttggggccgg tggtatgacc ggcatcctgt
    22081 tttctctcgg tgccagtatg gtgctcggtg gtgtggcgca gatgctggca ccgaaagcca
    22141 gaactccccg tacacagaca acggataacg gcaaacagaa cacctgtttc tcctcactgg
    22201 ataacatggt tgcccagggc aatgttctgc cggttctgta cggtgaaatg cgcgtggggt
    22261 cacgcgtggt ttctcaggag atcagcacgg cagacgaagg ggacggtggt caggttgtgg
    22321 tgattggtcg ctgatgcaaa atgttttatg tgaaaccgcc tccgggcggt tttatcgttt
    22381 atggagcatg acgaatgggt aaaggcagca gtaaggggca taccccgcgc gaagcgaagg
    22441 acaacctgaa gtccacgcag ctgctgagtg tgatcgatgc catcagcgaa gggccggttg
    22501 aaggtccggt ggatggatta aaaagcgtgc tgctgaacag tacgccggtg ctggacagtg
    22561 aggggaatac caatatatcc ggcgtcacgg tggtgttccg ggccggtgag caggagcaga
    22621 caccgccgga gggatttgaa tcctccggtt ccgagacggt gctcggtaca gaagtgaaat
    22681 atgacacgcc gatcacccgc accattacgt ctgcaaacat cgaccgtctg cgctttacct
    22741 tcggtgtaca ggcactggtg gaaaccacct caaaggggga caggaatcca tcggaagtcc
    22801 gcctgctggt tcagatacag cgtaacggtg gctgggtgac ggaaaaagac atcaccatta
    22861 agggtaaaac cacttcacag tatctggcct cggtggtggt ggataacctg ccgccgcgcc
    22921 cgttcagtat ccggatgcgc aggatgacgc cggacagcac cacagaccag ctgcagaaca
    22981 aaacgctctg gtcgtcatac accgaaatta tcgatgtgaa acagtgctac ccgaacacgg
    23041 cactggtcgg cgtgcaggtg gactcggagc agttcggcag ccagaaggtg agccgtaatt
    23101 atcatctgcg cgggcgtgtt ctgcaggtgc cgtcgaatta taacccgcag acgcggcaat
    23161 acagcggtat ctgggacgga acgtttaaac cggcatacag caacaacatg gcctggtgtc
    23221 tgtgggatat gctgacccat ccgcgctacg gcatggggaa acgtcttggt gcggcggatg
    23281 tggataaatg ggcgctgtat gtcatcggcc agtactgcga ccagtcagtg ccggacggct
    23341 ttggcggcac agagccgcgc atcacctgta atgcctggct gaccacgcag cgtaaggcgt
    23401 gggatgtgct cagtgatttc tgctcggcga tgcgctgtat gccggtatgg aacgggcaga
    23461 cgctgacgtt cgtgcaggac cgaccatcag ataaggtgtg gacctataac cgcagtaatg
    23521 tggtgatgcc ggatgatggc gcgccgttcc gctacagctt cagcgccctg aaggaccgcc
    23581 ataatgccgt tgaggtgaac tggattgacc cggataacgg ctgggagacg gcgacagagc
    23641 ttgtggagga cacgcaggcc attctccgtt acggtcgtaa cgtcacgaag atggatgcct
    23701 ttggctgtac cagccggggg caggcacacc gcgccgggct gtggctgatt aaaacggagc
    23761 tgctggagac gcagaccgtg gatttcagcg tcggcgcaga agggcttcgc catgtgccgg
    23821 gtgatgttat tgaaatctgc gatgatgact atgcggggat cagcatcggc gggcgcgtgc
    23881 tggcggtgaa cagccagacc cggacgctga cgctcgaccg tgaaatcacg ctgccatcct
    23941 ccggtaccac gctgataagc ctggttgacg gaagtggcaa tccggtcagc gtggaggtcc
    24001 agtccgtcac cgacggcgtg aaggtaaaag tgagccgtgt tcctgacggc gttgccggat
    24061 acagcgtatg ggggctgaag ttgccgacgt tgcgccagcg cctgttccgc tgcgtgagta
    24121 tccgtgagaa cgatgacggc acgtatgcca tcaccgccgt gcagcatgta ccggaaaaag
    24181 aggccatcgt ggataacggg gcgcactttg acggcgacca gagcggcacg gtgaatggtg
    24241 tcacgccgcc agcagtgcag catctgaccg ccgaagtcac tgcagacagc ggggaatatc
    24301 aggtgctggc gcgatgggac acgccgaagg tggtgaaggg cgtgagcttc ctgcttcgcc
    24361 tgaccgtggc agcggatgac ggcagtgagc ggctggtcag cacggcccgg acggcggaaa
    24421 ccacataccg cttcacgcag ctggcgctgg gacggtacac gctgacagtc cgggcggtaa
    24481 atgcgtgggg acagcagggc gatccggcgt cggtatcgtt caggattgcc gcaccggtag
    24541 caccgtcgcg gattgagctg acgccgggct attttcagat aactgccacg ccgcatcttg
    24601 cggtttatga tccgacggta cagtttgagt tctggttctc ggaaacgcgg attaccgata
    24661 tcaggcaggt tgaaaccaca gcccgctacc ttggcgcggg gctgtactgg atagccgcca
    24721 gtatcaatat caaaccgggc catgattatt acttttatat ccgcagtgtg aacaccgttg
    24781 gcaaatcggc attcgtggag gccgtcggtc gggcgagcga tgatgcggaa ggttacctgg
    24841 attttttcaa aggcaagata accgaatccc atctcggtaa agagctgctg gaaaaagttg
    24901 atctgacgga ggataacgcc agcagactgg atgagttttc gaaagagtgg aaggacgcta
    24961 acgataaatg gaatgcgatg tggggcgtca aaattgagca gaccaaagac ggcaaacatt
    25021 atgtcgcggg tattggcctc agcatggagg acacggagga aggcaagctg agccagtttc
    25081 tggttgccgc taaccgtatc gcgtttattg acccggcaaa cgggaatgaa acgccgatgt
    25141 ttgtggcgca gggcaaccag atattcatga atgacgtgtt cctgaaacgc ctgacggctc
    25201 ccaccattac cagcggtgga aatccgccgg cattttccct gacaccagac ggaaagctga
    25261 ccgctaaaaa tgcggatatc agcggtaatg tgaatgcaaa ttcagggacg ctcaacaatg
    25321 tcacgattaa tgaaaactgt cagattaagg ggaaactgtc agccaatcag attgaaggcg
    25381 atattgtcaa aacggtcagc aagtctttcc cccgcacgaa cagttatgcc agtggcacca
    25441 tcacggtaag aatcagtgat gatcagaaat ttgaccggca ggtcatgata ccgccagtgt
    25501 tattccgcgg tggtaagcat gagaatttca acagtaataa ccaacagtca tactggtatt
    25561 caacctgccg gttaagagtg acccgcaatg gtcaggagat ttttaatcag tccacgacgg
    25621 atgctcaggg cgtattttcc tcagttatag atatgcctgc cggacagggg acgctgacac
    25681 tgacattcac cgtatcttca tcaggagcga ataactggac accaacaacc agtatcagcg
    25741 atctgctggt tgtggtgatg aaaaaatcca cagcaggtat cagtatcagc tgaattttat
    25801 aacccagaac gggcgtcaga aatgacgcct tttttattgc agaaaagcga gaggtaatta
    25861 tgcgtaaact ttatgccgcc attttgtccg cagccatttg tctggccgta tccggtgcgc
    25921 ctgcatgggc gtctgaacat cagtccacgc tgagcgcggg gtatcttcat gcccggacga
    25981 acgttcccgg cagtgatgat ctgaacggga ttaacgtgaa ataccgttat gagtttacgg
    26041 acacactggg gatggtgacg tcgttcagct atgcaggaga caagaatcgc cagattaccc
    26101 gttacagcga tacccgctgg catgaagatt ccgttcgtaa ccgctggttc agcgtaatgg
    26161 cggggccgtc tgtgcgcgtg aatgaatggt tcagcgcgta tgcgatggcg ggtgtggctt
    26221 acagccgtgt gtcgactttc tccggggatt atctccgcgt aactgacaac aaggggaaaa
    26281 agcacgatgt gctgaccgga agtgatgacg gtcgccacag caacacgtct ctggcgtggg
    26341 gagctggcgt gcagtttaac ccgaccgaat ccgtggccat tgatgtcgct tatgaaggct
    26401 ccggcagtgg tgactggcgc actgacgggt tcatcgtggg tgttggttat aaattctgat
    26461 tagccaggta acacagtgtt atgacagccc gccggttcag gcgggctttt ttgtggggtg
    26521 aatatggcag taaaaatttc aggtgtactg aaagacggca caggaaaacc ggtacagaac
    26581 tgcacaatcc agctgaaagc aaaacgtaac agtaccacgg tggtggtgaa cacgctggca
    26641 tctgaaaatc cggatgaagc cgggcgttac agcatggacg ttgagtacgg tcagtacagc
    26701 gttattctgt tggtggaagg attcccgccg tcacatgccg ggaccatcac cgtgtatgaa
    26761 gattcccgac ccggtacgct gaatgatttt ctcggtgcca tgacggagga tgatgcccgt
    26821 ccggaggcac tgcgccgttt tgagctgatg gtggaagagg tggcgcgtaa cgcgtccgtg
    26881 gtggcacaga acacggcagc cgcgaagaag tcagccagtg atgccagcac atcagcccgt
    26941 gaggcggcaa cccatgcgac tgatgctgca ggctcagcac gcgcagccag cacgtcagcc
    27001 ggacaggccg cgtcgtcggc tcagtcagcg acttccagcg caggaacggc atcaacaaag
    27061 gccactgaag catcaaaaag tgctgccgct gcagagtcct caaaaagcgc ggcagctacc
    27121 agtgccagtg ccgcgaaaac gtcagaaacg aatgctgcag cgtcacaaca atcagcagcc
    27181 acttctgcat ccaccgcgac tacgaaagcg tcagaagctg ccacctcagc ccgggatgcg
    27241 gcggcttcaa aagaggcggc aaaatcatca gaaacgaacg catcctcgag cgccagtagc
    27301 gcagcttcct cggcaacagc ggcaggaaat tccgcgaagg cggcaaaaac gtcagagacg
    27361 aacgccaggt cttctgaaac ggcagcggga cagagcgcct cggctgcggc aggctcaaaa
    27421 acagcggctg cgtcgtctgc cagtgcagcg tcaacaagtg ccgggcaggc ctcagccagt
    27481 gccaccgccg ccggaaaatc ggcagaaagc gccgcatcgt ctgcttcaac agccacaacg
    27541 aaggctggcg aagccactga acaggccagc gcagcagcga ggtctgcttc cgcagcgaag
    27601 acatccgaaa cgaacgcgaa agcgtcggaa accagcgcag aatcctcaaa aacggctgcc
    27661 gcatcgtcag ccagttcggc gtcgtcatcg gcctcatcgg cgtctgcttc aaaagatgag
    27721 gcgaccagac aggcgtcagc agcgaagggt agcgccacga cggcatccac gaaggcgaca
    27781 gaggcagctg gcagtgcgac ggcggcagct cagagcaaaa gtacggcgga atctgcagca
    27841 acgcgcgccg agacagcggc aaaacgggca gaggatattg catccgccgt ggcgcttgag
    27901 gatgcgagca cgacgaaaaa ggggatagta cagctcagca gtgcgaccaa cagcacttcc
    27961 gagtcactgg cggcaacgcc aaaagccgtt aaggccgcgt atgacctggc taacgggaaa
    28021 tacaccgcac aggatgcaac gacagcacag aaagggataa tccagctaag cagcgcgacc
    28081 aacagcacgt ctgaaacgct ggcggcaacg ccaaaggcag taaaagcagc caatgacaat
    28141 gctgagaaac gtctgcagaa agatcagaac ggtgcggata tccctggcaa agacaccttt
    28201 acgaaaaata ttggtgcctg ccgtgccttc ggtgggtcag taagcacaac aacaggaaac
    28261 tggacgactg cacagtttat cgagtggctg gattctcagg gagcatttaa ccatccatac
    28321 tggatgtgca agggttcctg gtcttatggc aataataaaa tcattactga tactggctgc
    28381 ggtaatattc atctcgccgg agctgtcatt gaagtaatgg ggataaagtc agcgatgacg
    28441 atccgcatta ccacaccgac cacctccact ggtggtggaa caactaacgc ccagtttacc
    28501 tatattaatc acggaacaga ttattcacct ggctggcgaa gggactataa ctccagaaat
    28561 aagccaacgg catcagagat cggggcgtta ccgtcaggtg gaacagcagt atcatcagtt
    28621 aatctgtctt caaaaggtcg ggtaaccgcg ctgacagaca atacgcaggg ggcaacaggt
    28681 cttgagttat acgaggtgta taacaacgga tatccaacag cgtatggaaa tatcattcac
    28741 ctgaaaggga tgacagccgt tggcgaaggt gagttactca tcggctggag tggtacaagc
    28801 ggtgctcatg ctccggcatt tattcgttca cgacgggata cgaccgacgc aaactggtcg
    28861 ccgtgggcgc agctttacac ctcggctcat cctcctgcag agttttatcc agtcggtgca
    28921 ccaatcccgt ggccatcaga taccgttccg tctggttatg ccctgatgca ggggcagact
    28981 tttgacaaat ctgcttaccc gaaacttgca gccgcttatc cgtcaggcgt gatccctgat
    29041 atgcgtggct ggacgattaa gggcaagccc gccagtgatc gagccgtatt gtctcaggaa
    29101 caggacggca ttaaatcaca cacccacagc gccagcgtat ccagtacgga tttggggacg
    29161 aaaaccacat cgtcgtttga ttacggcact aaatccacga ataacactgg tgcgcatacc
    29221 catagtgtta gcggtacggc tgcttcagcc ggtgcacata cccattcgat gacatttgtt
    29281 tcaggtggtt ccagtggtgc tccgggaagt ggatcacctg attattctaa atacagtgtt
    29341 aacacttctt ctgcaggcgc tcatacgcac tctgtatcgg gtactgctgc aagcgcaggt
    29401 gcacacgcac atactgtcgg tattggtgct catacgcact ccgttgcgat tggttcacat
    29461 ggacatacca tcaccgttaa cgctgctggt aacgcggaaa acaccgtcaa aaacatcgca
    29521 tttaactata ttgtgaggct tgcataatgg cattcagaat gagtgaacaa ccacggacca
    29581 taaaaattta taatctgctg gccggaacta atgaatttat tggtgaaggt gatgcatata
    29641 ttccgcctca tacaggtctg ccagcaaaca gtaccgatat tgcaccgcca gatattccgg
    29701 caggcttcgt ggctgttttc aacagtgatg aggcatcgtg gcatctcgtt gaagaccatc
    29761 ggggtaaaac ggtttatgac gtagcgtcag gggacgcgtt atttatttct gaactcggtc
    29821 cgttaccgga aaatgttacc tggttatcgc cggaagggga gtttcagaag tggaacggca
    29881 cagcctgggt gaaagatgca gaagcagaaa aactgttccg gatccgggag gcggaagaaa
    29941 caaaaaacag cctgatgcag gtagccagtg agcatattgc gccacttcag gatgctgtag
    30001 atctggaaat cgcaacggag gaagaaacct cattgctgga agcctggaaa aaatatcggg
    30061 tgttgctgaa ccgtgttgat acatcaactg cacctgatat tgagtggcct acgaaccctg
    30121 tcagggagta atcattggga ttatgccgca gcacgtctta agcaagaacg tgctgcggtt
    30181 ggatgctatt ttttccctga agcggaaaac attactacag taccttgaac cttggtttta
    30241 acattctcga aatgctctga gagtatatgt gttaagcctt cttcggaatc ttttgtgttt
    30301 gaaaagatgc ctttctgatt gtaaatgcgc atcagttttt gaccgaagct attgtgcaca
    30361 actccatcgc caagaattgt ggctccgtat agagttccat c
//
LOCUS       DADKRT010000029        29257 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.029, whole genome shotgun sequence.
ACCESSION   DADKRT010000029 DADKRT010000000
VERSION     DADKRT010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 29257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29257
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.029"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..154
                     /locus_tag="JQ356_001113"
     CDS             <1..154
                     /locus_tag="JQ356_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2135 domain-containing protein"
                     /protein_id="HAY4621277.1"
                     /translation="NYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTL
                     VKSFDW"
     gene            429..3278
                     /gene="rcsC"
                     /locus_tag="JQ356_001114"
     CDS             429..3278
                     /gene="rcsC"
                     /locus_tag="JQ356_001114"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HAY4621278.1"
                     /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
                     EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANR
                     LQALLGGEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGEPRWMQERSW
                     FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA
                     RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE
                     PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
                     YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES"
     gene            complement(3478..4128)
                     /gene="rcsB"
                     /locus_tag="JQ356_001115"
     CDS             complement(3478..4128)
                     /gene="rcsB"
                     /locus_tag="JQ356_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HAY4621279.1"
                     /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
     gene            complement(4145..6817)
                     /gene="rcsD"
                     /locus_tag="JQ356_001116"
     CDS             complement(4145..6817)
                     /gene="rcsD"
                     /locus_tag="JQ356_001116"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HAY4621280.1"
                     /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIQKRVNTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYL
                     EKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLIST
                     LPLKDLTSGFKESTISDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT
                     FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGDNDNEKEGTDSVSIHFNS
                     TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS
                     SRSTESLPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL
                     NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
                     AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDE
                     IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD
                     RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH
                     FPFINQPQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE
                     VEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNP
                     SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG
                     GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG
                     KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL"
     gene            7556..8686
                     /gene="ompC"
                     /locus_tag="JQ356_001117"
     CDS             7556..8686
                     /gene="ompC"
                     /locus_tag="JQ356_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HAY4621281.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNKSEDGDQTYVRLGFKGETQVTDQLTGYGQWEYQIQGNTSEDNKENSWTRVAFAGL
                     KFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFG
                     LVDGLNFAVQYQGKNGSVSGEGMTNNGRGALRQNGDGVGGSITYDYEGFGIGAAVSSS
                     KRTDDQNGSYISNGVVRNYIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSL
                     GWANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKNLGVINSRNYDDEDILKYVDVGATY
                     YFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF"
     gene            8798..9853
                     /gene="apbE"
                     /locus_tag="JQ356_001118"
     CDS             8798..9853
                     /gene="apbE"
                     /locus_tag="JQ356_001118"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HAY4621282.1"
                     /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
                     FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
                     MAEIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDEMKAKTGLQH
                     LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR
                     GINGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
                     TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
                     KTWMSPQFKSFLVSEKN"
     gene            9927..10979
                     /gene="ada"
                     /locus_tag="JQ356_001119"
     CDS             9927..10979
                     /gene="ada"
                     /locus_tag="JQ356_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HAY4621283.1"
                     /translation="MKNATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA
                     RHALRENVSFYANASEALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTL
                     EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP
                     DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCALGRCPVAESERGICAILLGDD
                     DATLISELQQMFPAADNAPADLTFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW
                     QALRTIPCGETVLANAIGKPKAVRAVASACAANKLAIVIPCHRVVGGDGTLSGYRWGV
                     SRKAQLLRREAENEER"
     gene            10979..11629
                     /gene="alkB"
                     /locus_tag="JQ356_001120"
     CDS             10979..11629
                     /gene="alkB"
                     /locus_tag="JQ356_001120"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HAY4621284.1"
                     /translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS
                     PFRQMVTPGGYTMSVAMTNCGHLGWTIHRQGYLYSPIDPQTNKPWPAMPQSFHDLCQR
                     AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK
                     RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFYPLTTDCRYNLTFRQAGKKE"
     gene            11705..13348
                     /gene="yojI"
                     /locus_tag="JQ356_001121"
     CDS             11705..13348
                     /gene="yojI"
                     /locus_tag="JQ356_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin J25 efflux ABC transporter YojI"
                     /protein_id="HAY4621285.1"
                     /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIEMA
                     DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT
                     IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA
                     QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLMAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQD
                     NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
                     EDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
                     SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
     gene            13566..15212
                     /gene="mqo"
                     /locus_tag="JQ356_001122"
     CDS             13566..15212
                     /gene="mqo"
                     /locus_tag="JQ356_001122"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HAY4621286.1"
                     /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA
                     TLGTYLRELEPEWSMTMLERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
                     EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL
                     QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS
                     LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL
                     QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD
                     GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML
                     SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDADKGGVLRLGTEVVSDQQGTIA
                     ALLGASPGASTAAPIMLDLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE
                     LQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQKEVADIAL"
     gene            complement(15362..15850)
                     /gene="eco"
                     /locus_tag="JQ356_001123"
     CDS             complement(15362..15850)
                     /gene="eco"
                     /locus_tag="JQ356_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HAY4621287.1"
                     /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV
                     IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVS
                     TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAE
                     VR"
     gene            16258..16752
                     /gene="napF"
                     /locus_tag="JQ356_001124"
     CDS             16258..16752
                     /gene="napF"
                     /locus_tag="JQ356_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HAY4621288.1"
                     /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI
                     NACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDAC
                     LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY
                     LHAH"
     gene            16742..17005
                     /gene="napD"
                     /locus_tag="JQ356_001125"
     CDS             16742..17005
                     /gene="napD"
                     /locus_tag="JQ356_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HAY4621289.1"
                     /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
                     IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
     gene            17002..19488
                     /gene="napA"
                     /locus_tag="JQ356_001126"
     CDS             17002..19488
                     /gene="napA"
                     /locus_tag="JQ356_001126"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HAY4621290.1"
                     /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
                     PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
                     RMKNGKYDKEGEFTLITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
                     KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
                     MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
                     QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
                     EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
                     LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
                     GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
                     DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
                     RRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
                     LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
                     GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
                     FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
                     QLVNKLTQDATDPLSKETDFKKCAVKLEKV"
     gene            19495..20190
                     /gene="napG"
                     /locus_tag="JQ356_001127"
     CDS             19495..20190
                     /gene="napG"
                     /locus_tag="JQ356_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HAY4621291.1"
                     /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
                     RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
                     EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
                     ITLELERNTRTGKHARFLPTVHRDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
                     YRFGWLEGNNGKS"
     gene            20177..21040
                     /gene="napH"
                     /locus_tag="JQ356_001128"
     CDS             20177..21040
                     /gene="napH"
                     /locus_tag="JQ356_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HAY4621292.1"
                     /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
                     FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
                     LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWI
                     NPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
                     AATDRQKCNRCMDCFHVCPEPRVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
                     ITTRWSSGAKS"
     gene            21037..21486
                     /gene="napB"
                     /locus_tag="JQ356_001129"
     CDS             21037..21486
                     /gene="napB"
                     /locus_tag="JQ356_001129"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HAY4621293.1"
                     /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
                     GAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
                     THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
     gene            21496..22098
                     /gene="napC"
                     /locus_tag="JQ356_001130"
     CDS             21496..22098
                     /gene="napC"
                     /locus_tag="JQ356_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HAY4621294.1"
                     /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
                     KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
                     QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
     gene            22117..22734
                     /gene="ccmA"
                     /locus_tag="JQ356_001131"
     CDS             22117..22734
                     /gene="ccmA"
                     /locus_tag="JQ356_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HAY4621295.1"
                     /translation="MLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLL
                     RLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDG
                     DTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVN
                     GVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA"
     gene            22731..23393
                     /gene="ccmB"
                     /locus_tag="JQ356_001132"
     CDS             22731..23393
                     /gene="ccmB"
                     /locus_tag="JQ356_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HAY4621296.1"
                     /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
                     LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
                     VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL
                     LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS
                     IQ"
     gene            23435..24172
                     /gene="ccmC"
                     /locus_tag="JQ356_001133"
     CDS             23435..24172
                     /gene="ccmC"
                     /locus_tag="JQ356_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmC"
                     /protein_id="HAY4621297.1"
                     /translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
                     PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
                     FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
                     ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
                     MRMRNLILLMEKRRPWVSELILKRGRK"
     gene            24169..24378
                     /gene="ccmD"
                     /locus_tag="JQ356_001134"
     CDS             24169..24378
                     /gene="ccmD"
                     /locus_tag="JQ356_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HAY4621298.1"
                     /translation="MTLAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR
                     AILCGVEQQRAREARLRAAQQQEAA"
     gene            24375..24854
                     /gene="ccmE"
                     /locus_tag="JQ356_001135"
     CDS             24375..24854
                     /gene="ccmE"
                     /locus_tag="JQ356_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HAY4621299.1"
                     /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
                     YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL
                     FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
     gene            24851..26800
                     /locus_tag="JQ356_001136"
     CDS             24851..26800
                     /locus_tag="JQ356_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY4621300.1"
                     /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
                     MLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL
                     MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
                     LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAIASLLSGRLDSTYARFTRPWTLAAW
                     IFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKA
                     WTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAA
                     RGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPF
                     FNTMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKV
                     VAMTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQN
                     YSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKPETVLYAEK
                     RYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMAL
                     GGLLCLFDPRYRKRVSPQKTAPEAV"
     gene            26797..27354
                     /gene="dsbE"
                     /locus_tag="JQ356_001137"
     CDS             26797..27354
                     /gene="dsbE"
                     /locus_tag="JQ356_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbE"
                     /protein_id="HAY4621301.1"
                     /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
                     VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
                     MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
                     GDLNPRVWEEEIKPLWEKYSKEAAQ"
     gene            27351..28403
                     /locus_tag="JQ356_001138"
     CDS             27351..28403
                     /locus_tag="JQ356_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HAY4621302.1"
                     /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
                     KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
                     LLWVLPVVAIGIGGWVIYARSRRRVRVVPDAFPEQSVPEGKRAGYIVYLPGIVVALIV
                     AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
                     PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
                     LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLSANDTRRAVIE
                     RSIAQAMQHLSPQESK"
     gene            complement(28438..29085)
                     /gene="narP"
                     /locus_tag="JQ356_001139"
     CDS             complement(28438..29085)
                     /gene="narP"
                     /locus_tag="JQ356_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HAY4621303.1"
                     /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPSFEVVAEAGDGASA
                     IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
                     ADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
BASE COUNT         6682 a         7221 c         8105 g         7249 t
ORIGIN      
        1 caactactat ggtgggcgca gcgaaacgga attaaccacc gcccaactga cgctgatcac
       61 cgatgaagga tcggtcaatg agaaacagga aacatttatt gtaccgatgc gtaatgctgg
      121 cgagctgacg ctggtgaaaa gttttgactg gtgatccatc ccttcacaca acctggctct
      181 ctcttttttc agataagact gctgggcgat ctgccgacgc caggatataa ccattaacaa
      241 gcgtcggcag attggtcatt tcttattttt cgtactgaga actgtccatc tactccggct
      301 ttcctggtta aggcaatggt ttctaagcga tacgcattat tgcaataatg acagaacatt
      361 gcggtaacac gcttttaccg ctaccttaac cacactccat cggtcacctg aggcggagct
      421 tcgccccttt gaaatacctt gcttcttttc gtacaaccct gaaagcctcg cgctacatgt
      481 tcagagcatt ggcgttagtg ctctggctgt tgattgcttt ttcatccgtt ttttacatcg
      541 ttaatgcgtt acatcagcga gaatcggaaa ttcgtcagga atttaatctg agttccgatc
      601 aggctcagcg ctttattcaa cgcacctctg atgtgatgaa agagctgaag tacatcgccg
      661 aaaatcgctt atcggcagaa aacggtgtgc tttccccgcg tggacgagaa acgcaggcgg
      721 atgtgcctgc gtttgaaccg ctgtttgccg actccgattg ttccgcaatg agtaacacct
      781 ggcgaggttc tctggagtca ttggcgtggt ttatgcgcta ctggcgcgat aatttttctg
      841 cggcttacga tctaaaccgg gtatttttaa tcggcagcga taacctctgc atggccaatt
      901 tcggtctgcg tgatatgcca gtggaacgcg ataccgcgtt gaaagctttg catgaacgca
      961 tcaataaata tcgaaatgca ccacaagatg atagcggcag taacctctac tggatcagcg
     1021 aaggtccgcg ccctggcgtc gggtattttt acgcgttgac gccagtttat ctggcgaacc
     1081 ggttgcaggc gcttttgggg ggcgagcaga ccatccggat ggagaacttt ttcttaccgg
     1141 gtacgttgcc gatgggggtt accattcttg atgaaaatgg tcataccctg atttcgctta
     1201 ccggaccaga aagtaaaatt aagggcgagc ctcgctggat gcaggaacgc tcctggtttg
     1261 gctatacgga agggttccgg gagctggtgc tgaagaaaaa tctgccaccc tcatcgctaa
     1321 gcatcgtgta ttcggtgccg gttgataagg tgctggaacg cattcgcatg ttgatcctta
     1381 acgcaatttt gctgaatgtg cttgccggag ctgcattgtt tactctcgca cggatgtacg
     1441 agcgacgtat tttcattccg gcggaaagcg acgccctgcg actggaagaa catgagcagt
     1501 tcaatcgcaa gattgtcgcc tccgcgccag tgggtatctg cattttgcgt accgctgatg
     1561 gcgtcaatat tttaagtaac gaactggcgc atacctatct caatatgctt acgcatgagg
     1621 accgccaacg actgacgcaa attatctgtg ggcagcaggt caattttgtt gatgtcctga
     1681 ccagcaacaa taccaatctg caaatcagct tcgtccattc gcgctatcgt aatgaaaacg
     1741 tggccatttg tgtgctggtg gatgtttctt cgcgcgtgaa gatggaagag tcgttgcagg
     1801 agatggcaca agcagcggaa caggcgagcc agtcaaaatc gatgttcctt gccaccgtca
     1861 gtcatgagct gcgaacgccg ctgtatggca ttatcggtaa cctggatctg ttgcaaacca
     1921 aagagttacc gaaaggcgtc gatcggctgg tgacggcaat gaacaactct tccagcctgt
     1981 tgttgaaaat tatcagcgat attctcgatt tctcgaagat tgaatcggaa cagttgaaga
     2041 tcgaaccgcg tgagttttca ccgcgtgaag tgatgaacca catcaccgcc aactatttac
     2101 cgctggtggt acgcaagcag ttaggcttgt actgctttat tgaaccggat gtgccagtgg
     2161 ccttaaatgg cgacccgatg cgtttacagc aggtcatctc caacctgttg agtaacgcca
     2221 taaaattcac cgataccggc tgtatagttt tgcatgtccg cgctgatggc gattatctct
     2281 ctatccgtgt tcgcgatacc ggcgtgggga ttccggcgaa agaagtggtg cgcttgtttg
     2341 atcccttctt ccaggtcgga acgggcgtac agcgaaactt ccaggggacc ggtctgggtc
     2401 tggcgatttg tgaaaaactg atcagcatga tggacggcga tatctcggta gattcagaac
     2461 cgggaatggg cagccagttt accgtgcgta ttccgttgta cggcgctcag tacccgcaga
     2521 aaaaaggcgt ggaagggttg agtggtaaac gctgctggct ggcggtccgc aatgcgtcgc
     2581 tctgtcagtt cctagaaact agtttgcagc gcagcggcat cgtcgttaca acatacgaag
     2641 ggcaggaacc gactcccgaa gatgtgttaa ttactgacga ggtagtgagt aaaaaatggc
     2701 agggtagagc ggtagtgacc ttctgtcgtc gccatattgg tattccgctg gagaaagcgc
     2761 caggggagtg ggtacacagt gtggctgccc cgcatgagct accggcattg ttggcgcgta
     2821 tttatttgat cgagatggag agcgacgatc ctgctaacgc tctgccgtcg acggacaaag
     2881 cggtcagcga taatgacgat atgatgattc tggtcgtgga tgatcatccg attaaccgac
     2941 gtctgctggc agatcagttg ggatcgttgg gctatcaatg taaaaccgcg aatgatggtg
     3001 tcgatgcgct taatgtactt agcaagaatc atattgatat cgtgcttagc gacgtcaaca
     3061 tgccaaatat ggatggttac cgcttgacgc aacgcattcg tcagttggga ctgacgttgc
     3121 cggtaatcgg agtaactgct aatgcgttgg ctgaagagaa gcagcggtgt ctggagtccg
     3181 gtatggacag ctgcctgtcg aagccggtaa cgctggatgt gataaaacag acgctgacgg
     3241 tatatgccga gagggtcagg aaatcgcggg aatcgtagga cggataaggt gtttatgtcg
     3301 catctggcat tcagtgcaaa tgccagatgc gacgctgacg cgtcttatct ggcctacttt
     3361 gatgtaatct gttgaaataa tgggaatcgt aggacgcata aggcgtttac gccgcatccg
     3421 gcaatcggtg caaatgctag ataagacact aacgcgtctt atctggccta caggtgatta
     3481 gtctttatct gccggactta acgtcactga agagagataa ttcagcaggg cgatatcgtt
     3541 ctcgacaccc agcttcatca tcgcagattt cttctggcta ctgatggttt taatactgcg
     3601 gttcagcttt ttagcgatct cggtcaccaa gaagccttcc gcaaacaggc gcagaacttc
     3661 actctctttt ggcgagagac gcttgtcacc gtaaccacca gcactgattt tttccaacag
     3721 gcgagaaacg ctttccgggg taaatttctt ccctttctgc agcgcggcga gagctttcgg
     3781 cagatcggtc ggtgcacctt gtttcagcac gatcccttcg atatccagat ccaataccgc
     3841 actaagaatc gccgggttgt tgttcatagt cagaacaatg atcgacaggc ttgggaaatg
     3901 gcgcttgatg tacttgatta aggtaatgcc atcgccgtac ttatcgccag gcatggagag
     3961 atcggtaatc aacacatgcg catccagttt cggcaggttg ttgatcagtg ctgtagagtc
     4021 ttcaaattcg ccgacaacat tcacccactc aatttgctca agtgatttgc gaataccgaa
     4081 caagactatc ggatggtcat cggcaataat tacgttcata ttgttcatgt aataggctac
     4141 cttgctacag caagctcttg acataactgt caatgtcgct gatgtatttt tctattcctg
     4201 gaacatcctt ctcacgaatc agatgttcca gcgtttcaca taactgcttg ccgggtacca
     4261 gatttagcat ggcaaatacg cctttaagac gatgagccgt ttgggctaac gcagcaaagt
     4321 cactggttgc tgcttcagta tacagcctct taacatcatc cggtactgtg tctacaaaga
     4381 gcgcataata gccgctggca tggagttgcg cattttcatc tccgcccaga ggcgattctg
     4441 tcacctcttc ctgcgccagt tgcacttcaa ttaattgtaa gaccgcttcc tgcatagcgt
     4501 tgctcatatt gaagttgacg cacaattgac caggcccaat ttcccgtacg ccagactcat
     4561 catcgcttaa aagcaagcca gaggcagtaa gattagacgg attatccgtt aaaaagatat
     4621 cataatcttg actaattaat ctttcatcgg gtgtgataca ggttgcaccc caattttcta
     4681 actggcgagt gacaatattc cgaatttctg ccgaagtaac atccaccatt acgcagacat
     4741 catccagtaa acgctcttct tcctcttcaa cttccgggtc agcggcgagc attttgatat
     4801 gcacagagta gcgtgtacca agcccatccc gcgttttgat gtttaaatga ccgcccagtt
     4861 tacgcgccag ttgatcgctc agccagaatg ccagcgggtc cgccttgcca tagcgatcgt
     4921 tttggggctg gttgataaac gggaagtgca aattatccat ttcatgaata cttacgcctt
     4981 ctcccgtgtc cagaatgcgg aatgtcaggc ggtcttcaga ggactcatcc tgatcaacct
     5041 caagggtgat ttttcccaat tgcgttgagg tcacggcata ttgcatcagt agcagcaaaa
     5101 tacgtcgtaa ggcatcgcga tcgccgcggc gcatatcgtg tgctttcaga tgattgttaa
     5161 tcagcagttg cagaccttta cgcttgatgg caggcaacac tgaaggcaca acttcatcaa
     5221 ttaaatcctg cacggagaac agcaccgtct cacttttcca gctatcgtcc gcaagcatgt
     5281 tcgctaactg tatttcatcg accagccgca ccagcacatc tgcctgattc gccagttgtt
     5341 tgctttccgg ggcgttgagt ttagccgcgc tctccgccag ggactgtgcg ggttctttca
     5401 gcgcatcgcc aatgtttttc ataaaggtca tccgcccctg ctggtttttc tcatacagac
     5461 gctgcgcctg cttgagtttc ttgtttacca gcacttcgcg atcctgatcg cgaataatga
     5521 aaatttgtgt gcgcggcgcg acctggctgc ggaacatgcg gatctcatac agctcgttat
     5581 tgatcgtcgc ctgaataatc ccctgatgct gttccgccat ggtggtgatg ttttgcagat
     5641 tcaaatgcgg cagcaaatga tcggcaattt tgttacttat gacagtgcgg ttcgattcct
     5701 gatcgtgaac cagcaggccg agcggcagca gtgagactat ctcttcatta attgcccgta
     5761 aaatgcgcaa ttcgttattg accgccgtgc tgggtagact ttctgtactg cggctggaga
     5821 aatggcggaa tgtggtatag ccaaataacg ccagcgccag caaaccgatg ttcagcagca
     5881 gtggcagcag aatgttttgc aacgtatcca gcaataaggt gccataagga acctgccaga
     5941 ccaggcgcat atcggtagag ttgagtgccg aggagatttc aatcttcgta ctgttaaagt
     6001 ggatactgac gctatccgtc ccttctttct cattatcatt gtctcccgtt gccgtcgcgt
     6061 ctggctcaag gcggaaactg tccagcggca tacccggtgg gatcaaatca ttaatcggta
     6121 gatcaaaagc tacgaccgtt gccagatgtc ccggctggtt gaacgtggta cgcaaggtaa
     6181 agtaatgacc gttctgccag gccaggcggc gcatgttaga aaaactttcg cgttcatcga
     6241 gggcgttggc ctgttgcaac atctctgcac gacgtgaatc aacaatgtcg ctgatggtcg
     6301 attctttaaa tccggaggtg agatctttga ggggcagggt tgagatcagc accagactgt
     6361 tatcctgacc attcaggtaa tacatcgacc acggtacatt ttctgcgccc cacaatgtgt
     6421 ccagataggt ggacatccgc tgagtcatct caagcgttga gttgtcgtga gagccaaaga
     6481 ttaacgcttc cgttttgcgg cgcggtttct ccagatagta gacatcctgt ttcaggcgcg
     6541 tctcttgtaa accttcgccg gaggaggggg aggttgtcgc ggcaatgttg tcgtagatct
     6601 gccaggtcac gtaacgccag gtattgacgc gcttttggat agcgtgggta atgtcgacaa
     6661 tctggtaact tttatctttc agccatgcgt taacggcgct ttgtaccatt acacccatcg
     6721 tcaccagtaa cacaatgatc aacagtaaaa agaagcgggt aatgctcccc ggtaggagtg
     6781 aaaagcgggt cgtggccgtt gtctctttct gacgcattcg tgtttatgac ctgttaaaac
     6841 ttcgcgaagt gatagggcag tataaagggt acagtgtgaa attccagact cttacctgat
     6901 tgatgattct ctattctccc gtgatattta tcatcctgca ttgggggaaa tagatgtaca
     6961 agcgccattt tgctgtacaa ataacctaca aaaagcccaa cgaaattaat tgcaaataaa
     7021 cgatgattgc tggaaattat gctgatgtta attatttgtg aaatagttaa caagcgttat
     7081 agtttttctg tggtagcaca gaataatgaa aagtgtgtaa agaagggtaa aaaaaaccgg
     7141 atgcgaggca tccggttgaa ataggggtaa acagacattc agaaatgaat gacggtaata
     7201 aataaagtta atgatgatag cgggagttat tctagttgcg agtgaaggtt ttgttttgac
     7261 attcagtgct gtcaaatact taagaataag ttattgattt taaccttgaa ttattattgc
     7321 ttgatgttag gtgcttattt cgccattcca caataatctt aaaaagttcc cttgtattta
     7381 cattttgaaa catctatagc gataaatgaa acatcttaaa agttttagta tcatattcgt
     7441 gttggattat tctgcatttt tggggagaat ggacttgccg actgattaat gagggttaat
     7501 cagtatgcag tggcataaaa aagcaaataa aggcatataa cagagggtta ataacatgaa
     7561 agttaaagta ctgtccctcc tggtcccagc tctgctggta gcaggcgcag caaacgctgc
     7621 tgaagtttac aacaaagacg gcaacaaatt agatctgtac ggtaaagtag acggcttgca
     7681 ctatttctct gacaacaagt cagaagacgg cgaccagacc tatgtacgtc ttggtttcaa
     7741 aggcgaaact caggttactg accagctgac cggttacggc cagtgggaat atcagatcca
     7801 gggcaatacc tctgaagaca acaaagaaaa ctcctggacc cgtgtggcat tcgcaggtct
     7861 gaaattccag gatgtaggtt ctttcgacta cggtcgtaac tacggcgttg tttacgacgt
     7921 aacttcctgg accgacgtac tgccagaatt cggtggcgac acctacggtt ctgacaactt
     7981 catgcagcag cgtggtaacg gcttcgcgac ctaccgtaac accgacttct tcggtctggt
     8041 tgacggtctg aactttgctg ttcagtacca gggcaaaaac ggtagcgtaa gcggcgaagg
     8101 catgaccaac aacggtcgtg gcgctctgcg tcagaacggc gacggtgtcg gcggttctat
     8161 cacttatgat tacgaaggct tcggtatcgg tgctgcagtt tccagctcca aacgtactga
     8221 tgatcaaaat ggtagctaca tcagcaatgg tgtagttcgt aactacatcg gtactggcga
     8281 ccgtgctgaa acctacactg gtggtctgaa atacgacgct aacaacatct acctggctgc
     8341 tcagtacacc cagacctaca acgcaactcg cgtaggttcc ctgggttggg cgaacaaagc
     8401 acagaacttc gaagctgttg ctcagtacca gttcgacttc ggtctgcgtc cgtctgtagc
     8461 atacctgcag tctaaaggta aaaacctggg tgtcatcaat agtcgtaact acgacgacga
     8521 agatatcctg aaatatgttg atgttggcgc gacctactac ttcaacaaaa acatgtccac
     8581 ctatgttgac tacaaaatca acctgctgga cgacaaccag ttcactcgtg acgctggcat
     8641 caacactgat aacatcgtag ctctgggtct ggtttaccag ttctaatctc gattgatatc
     8701 gaacaaaggg cctgcgggcc cttttttcat tgttttcagc gtacaaactc agttttttgg
     8761 tgtactcttg cgaccgttcg catgaggata atcacgtatg gaaataagct ttacccgcgt
     8821 ggcactgctg gctgccgcgc tcttctttgt tggttgcgat caaaaaccac aacccgccaa
     8881 aacccacgct actgaagtta ccgttcttga aggcaaaacc atgggtacct tctggcgtgc
     8941 cagcatcccg ggcattgatg ccaaacgcag tgccgaactt aaagaaaaga ttcagaccca
     9001 gctggacgcc gacgatcagc tgctttcgac ctataaaaaa gattccgcgc tgatgcgctt
     9061 taacgactcg caaagtttgt cgccgtggcc agtaagtgaa gcgatggccg aaatcgtcac
     9121 tacctcgctg cgcattggcg cgaagaccga tggtgcgatg gatattaccg tcgggccgct
     9181 ggtaaatctg tggggctttg gcccggaaca acagccggtt caaattccga gccaggaaca
     9241 gatcgacgag atgaaagcca aaactggttt acagcacctt acggtcatta atcagtcgca
     9301 tcagcaatat ctgcaaaaag acctgccgga tttatatgtc gatctctcta ccgtcggcga
     9361 aggttatgcg gcggatcact tggcacgctt gatggagcag gaagggattt cccgctatct
     9421 ggtgtcggtg ggcggcgcgc tgaacagccg tggtatcaac ggtgaaggcc tgccgtggcg
     9481 ggtagcgatt caaaaaccaa ccgataaaga aaacgcagtt caggctgtgg tggatatcaa
     9541 cggtcatggg attagcacct ctggcagcta ccgtaactat tacgaactgg acggcaaacg
     9601 tctttcccat gttatcgatc cgcaaaccgg gcgtcccatc gaacacaatc tggtatccgt
     9661 gacggtgatt gctccgacgg cgctggaagc cgatgcctgg gatactggct tgatggtact
     9721 cgggccggag aaagccaaag aggttgttcg ccgggaaggg ctggcggttt atatgatcac
     9781 caaagaaggc gatagcttta aaacctggat gtcaccacag tttaaaagct tccttgtcag
     9841 cgaaaaaaat taaagcgcaa gattgttggt ttttgcgtga tggtgaccgg gcagactaaa
     9901 ggctatcctt aaccagggag ctgattatga aaaacgccac atgcttaact gacgatcaac
     9961 gctggcaatc tgtcttagcc cgcgacccga atgccgacgg cgaattcgtt ttcgccgtgc
    10021 gcaccacagg catcttttgc cgtccgtctt gccgcgccag acatgccttg cgggaaaatg
    10081 tctccttcta cgcaaatgcc agcgaggcac tcgccgccgg atttcgcccc tgcaaacgct
    10141 gccaacctga taaagccaat gcccagcaac atcggttgga taaaatcacc cacgcgtgtc
    10201 gactgctgga acaggaaacg cctgtaacgt tggaagcctt agccgaccag gtggcgatga
    10261 gtccatttca tctacatcgg ttgtttaaag cgactaccgg aatgacgcct aaagcctggc
    10321 aacaggcctg gcgcgctcgc cgtttgcgcg aatcgctggc gaaaggggag agcgtgacga
    10381 cgtctattct taacgccgga ttccccgaca gcagcagtta ctaccgcaaa gccgatgaaa
    10441 cgctgggcat gacggctaaa caattccgtc acggtggcga aaatctggcg gtgcgttacg
    10501 cgctggctga ttgtgcgctg ggtcgttgcc cggtggcaga aagcgagcgg gggatttgcg
    10561 cgatattgct gggcgatgat gacgcgacat taatcagcga gttgcagcag atgtttcccg
    10621 ctgccgacaa cgcgcctgcc gatctgacgt ttcagcaaca tgtgcgtgaa gtgatcgcca
    10681 gcctcaatca acgcgatacg ccgctgacgt taccgctgga tattcgcggc actgcttttc
    10741 agcaacaagt ctggcaggca ctgcgcacga taccttgcgg tgaaaccgta ctggctaacg
    10801 ccatcggcaa accgaaagcg gtacgggccg ttgccagcgc ctgtgccgcc aacaagctgg
    10861 ctatcgtaat accctgtcat cgagtggtcg gtggtgatgg cacactttcc ggttaccgct
    10921 ggggcgtgtc tcgtaaagcg caactgctgc gccgcgaagc tgaaaatgag gagaggtaat
    10981 gttggatctg tttgccgatg ctgaaccgtg gcaagagcca ctggcggctg gtgcggtaat
    11041 tttacggcgt tttgctttta acgctgcgga gcaactgatc cgcgatatta atgacgttgc
    11101 cagccagtcg ccgtttcgcc agatggtcac ccccggggga tataccatgt cggtggcgat
    11161 gaccaactgt gggcatctgg gctggacgat ccatcggcaa ggttatctct attcgcccat
    11221 tgatccgcaa acaaataaac cgtggcccgc catgccacaa agctttcatg atttatgtca
    11281 acgtgcggct acggcggcgg gctatccaga tttccagcca gatgcttgtc ttatcaaccg
    11341 ctacgctcct ggcgcgaaac tgtcgctgca tcaggataaa gacgaaccgg atctgcgcgc
    11401 gccaattgtt tctgtttctc tgggcttacc cgcgattttt caatttggtg gcctgaaacg
    11461 taatgatccg ctcaaacgtt tgttgttgga acatggcgat gtggtggtat ggggcggtga
    11521 atcgcggctg ttttatcacg gtattcaacc gttgaaagcg gggttttatc cactcaccac
    11581 cgactgccgc tacaacctga cattccgtca ggcaggtaaa aaagaataaa aataagaatt
    11641 attattgctg tgcgcgcgaa gatgtttaaa ctgcgggctg taattcattg tccgggtttt
    11701 ctgcatggaa cttcttgtac ttgtctggcg gcagtatcgc tggccattta tcagtgtgat
    11761 ggcgctaagc ctcgccagtg cggcattagg cattggctta attgctttta tcaatcagcg
    11821 ccttatcgaa atggcggata ccagtctgct ggtattgccg gagtttctgg gattattgct
    11881 gctgttgatg gcagtcactc tcggatcgca actggcgctc accactttgg ggcatcactt
    11941 cgtttaccga ctgcgtagtg aatttatcaa gcggattctg gatacccacg tcgagcgcat
    12001 tgaacaactc ggtagcgcct cgttgttggc gggattaacc agcgatgtgc gcaatatcac
    12061 cattgctttt gtgcgtcttc cggaactggt gcaggggatc attctcacta tcggttccgc
    12121 ggcgtatctg tggatgctgt cgggcaaaat gttgctggta acggctatct ggatggcgat
    12181 caccatctgg ggtggttttg tactggtggc gcgggtgtac aaacatatgg cgaccctacg
    12241 tgaaaccgaa gacaagctgt acacggattt tcaaactgta cttgaagggc gcaaagagct
    12301 gactctgaac cgggaacgcg ccgagtatgt gtttaacaac ctctacatcc ccgatgcgca
    12361 agagtatcgc catcatatta ttcgcgcaga caccttccat cttagtgccg tgaactggtc
    12421 aaacatcatg atgctgggcg ctatcggcct ggtgttctgg atggcgaaca gtctcggttg
    12481 ggctgatacc aacgttgctg cgacctattc gttgacgctt ttattcctgc gtacgccgct
    12541 gctttcggcg gttggcgcat tgccgacgct gctgatggcg caggtggcgt ttaacaagct
    12601 gaacaaattc gcgctcgcgc ctttcaaagc agagtttccg cgcccgcagg cgtttcccaa
    12661 ctggcaaacg ctggagctgc gtaatgtgac gtttagctat caggataacg cgttttccgt
    12721 tggtccgatt aatctcacca tcaaacgtgg cgagctactg tttctgattg gtggtaacgg
    12781 tagtggaaaa tcgacgctgg cgatgttgtt gacgggcttg tatcagccac aaagcggcga
    12841 aatcttgctg gatggcaaac ctgtcagcgg cgaacaaccg gaagattatc gcaaactgtt
    12901 ttcggcagtg tttaccgatg tctggctttt tgatcaactg ctggggccgg agggtaaacc
    12961 cgctaacccg caactggttg agaagtggct ggcgcagctg aaaatggctc ataagcttga
    13021 gttaagcaac gggcgtattg ttaacctgaa gttatcaaaa gggcagaaaa aacgcgtggc
    13081 gctgttgctg gcgctggcag aagaacgcga tattatcctg ctggatgaat gggcggcgga
    13141 tcaggatcca cacttccgtc gtgagtttta tcaggtgttg ctgccgctga tgcaggagat
    13201 gggtaaaact attttcgcta tcagtcatga tgatcattac tttatccacg ccgaccgcct
    13261 gctggaaatg cgcaatgggc aacttagcga gctgacgggc gaagagcgcg atgccgcttc
    13321 gcgtgatgcc gttgcccgga cggcataata ttacgacgct gacctggcgg actgctgccg
    13381 tcaggtcaat atgctaaaaa tcccttcatt tctaataacc ctataattaa tcaacgaaat
    13441 tataatgttt ctaaaattag aatataattt ataaacatta tttaaatgtt gttacttaag
    13501 tgttaccttt gatgccgcgc aaatctcacc tgcaataaag cgactaaaag taaggcatta
    13561 acaagatgaa aaaagtgact gccatgctct tctcgatggc cgtggggctt aatgccgttt
    13621 cgatggcggc aaaagcgaaa gcgtccgagg agcaggaaac tgatgtactg ttgattggcg
    13681 gcggcattat gagcgccacg ttggggacct atttacgcga gctggagcct gaatggtcga
    13741 tgaccatgct ggagcgcctg gagggtgtcg cgcaggagag ttcgaacggc tggaataacg
    13801 ccggaaccgg gcattctgca ctgatggaac tgaactacac cccgcaaaac gccgatggca
    13861 gtatcagtat tgaaaaagca gtcgccatta acgaagcatt tcagatttcc cgccagttct
    13921 gggcgcacca ggtcgagcgc ggcgtgctgc gtactccgcg ttcatttatc aataccgttc
    13981 cgcatatgag ctttgtctgg ggcgaggata acgttaattt cctgcgcgcc cgttacgccg
    14041 cgttgcaaca aagctcgctg tttcgcggta tgcgttactc tgaagatcac gcgcagatca
    14101 aagagtgggc accgttagtg atggaagggc gcgatccgca acagaaagtg gcagccacgc
    14161 gtacggaaat tggtaccgat gtgaactacg gcgagatcac ccgccagtta attgcttcct
    14221 tgcagaagaa atctaacttc tcgctgcaac tcagcagcga agtccgcgcc ctaaagcgta
    14281 atgacgataa cacctggacc gttaccgttg ccgatctgaa aaatggcact gcacagaaca
    14341 ttcgtgccaa atttgtcttt atcggcgcgg gcggtgcggc gctgaagctg ttacaggaat
    14401 cggggattcc ggaagcgaaa gactacgccg gtttcccggt gggcggacag ttccttgttt
    14461 cggaaaaccc ggacgtggtt aatcaccatc tggcgaaggt ttacggtaaa gcatccgttg
    14521 gcgcaccacc gatgtcggtt ccgcatatcg atacccgcgt tctggacggt aaacgcgtag
    14581 tgctgtttgg gccatttgcc accttctcaa ccaaattcct caaaaacggt tcattgtggg
    14641 atctgatgag ttccaccacc acctctaacg tgatgccgat gatgcacgtc gggctggata
    14701 atttcgatct ggtgaaatat ctggtgagtc aggtgatgtt gagtgaagag gatcgttttg
    14761 aagcgttgaa agagtactat ccgcaggcga aaaaagagga ctggcgtttg tggcaagcgg
    14821 ggcagcgtgt gcagattatc aagcgtgatg ccgataaagg tggtgtactg cgtctgggta
    14881 ctgaagtggt cagtgaccag caagggacca ttgccgcgct cctgggagca tcgccagggg
    14941 cgtcaaccgc cgcgccgatt atgttggatc tgctggaaaa agtatttggc gatcgcgttt
    15001 ccagcccgca atggcaggct acgttgaaag cgatcgttcc gtcttatgga cgcaagctga
    15061 acggtgatgt agcggcaaca gaacgcgagt tgcagtacac cagcgaagtg ctggggctga
    15121 aatacgacaa gccgcaggca gcagatagta cgccaaaacc gcagttgaaa ccgcaacccg
    15181 ttcaaaaaga agtggcggat attgcgttgt aatgatgtgc cacatccggc atggtatgcc
    15241 ggatgtggcg tatactgata agacgcgcca gcgtcgcatc aggcaaccgg ctcgggcgtt
    15301 agatgttgga tgcggcgtaa ccgccttatc caaccaacgg ggtgccgtac ttcacaacag
    15361 tttagcgaac ttctgcgttg tcaattttct cttccgcctt ccagacgcgg tatttcacat
    15421 ctacattgtc tggcgtatac accacgatcg gcagcttgct gttgtaacgc agcattccag
    15481 catcgcccag atacgcggtg acaaatttct tctctttctt gccatccggg caggccatca
    15541 tcgtggaaac cggcgagcta actttatcaa agacataata atcatagccc cagccttcca
    15601 gcgttttgct ttccagcttc ccgccgagac gatgcaaatt gcaatcgact tccagcgtct
    15661 gaccgattaa cagttctact ttcagggtag attcatcttc ttgcggggtt aactgaatca
    15721 cctgacgctt catccctttt tcagcttgtg gataaggcgc gattttttcc agtggctgga
    15781 cgctttctgc cgcccaggcg gaagtggtag cgaaagcggc aaacaatact gcaggtagaa
    15841 tggtcttcat ttttttgctt tccttcttca tttataggtt ttcaccgatg atgtcgctga
    15901 aggttaacat attcataaga tttattaatt tgctttatga ataacttaaa gaatattcag
    15961 acaattttac ctgctctttt agtgttaaat tctgatgaga gaacaaacca gcagaaatat
    16021 ctctggtgaa ttaatcgcta tataaatatg tttataacca tttgaaatgt gagcaaaagc
    16081 ccgtttttgc cacgcttccc gccactcttt tgatcctgct acaggtttta ccccgatcgg
    16141 ggtatgcatc tttgacacat cctttaatat cttagcggtt ataaaaatgg cttattaatt
    16201 atgcggttta tttggtcgct ctcaattttc agagcgcgtt aatgatggaa ggtcaatgtg
    16261 aagattgatg catcccgtcg gggcatactc actggtcgct ggcgcaaagc cagtaacggt
    16321 atccgtccgc cctggtccgg tgatgaatct cattttctga cccattgcac ccgttgcgac
    16381 gcctgtatta atgcttgtga aaacaacatt ctgcaacgcg gcgcgggcgg ctatccgagc
    16441 gttaatttca aaaataacga gtgcagcttc tgttacgctt gcgcgcaggc ttgccccgaa
    16501 tcgctatttt ctccgcgcca caccagggcc tgggatttgc agttcaccat tggggacgcg
    16561 tgcctggcgt atcagtcagt tgaatgccgc cgctgtcagg atagctgtga gccaatggca
    16621 attatctttc gcccgacgct ctccgggatc taccagccgc aacttaatag ccaactttgc
    16681 aacggatgtg gagcatgtgc agccagctgt ccggtatcag ccataactgc ggagtatctc
    16741 catgcacact aactggcaag tttgcagcct ggtcgtgcag gccaaaagcg aacgaatttc
    16801 agacatcagc acccaactga acgcctttcc cggctgtgaa gttgctgtca gcgacgcgcc
    16861 gagcggtcag ttgattgtgg tggtggaagc agaagacagc gaaacgctga tccaaaccat
    16921 tgagtcagta cgcaacgtag agggcgtgct ggcggtgtcg ctggtttatc accagcagga
    16981 agagcaaggt gaggaaacac catgaaactc agtcgtcgta gctttatgaa agctaacgcc
    17041 gttgcggccg ctgcggcggc tgccggtctc agcgtgccgg gcgttgcccg cgccgttgtt
    17101 ggtcagcagg aagccatcaa atgggataaa gcgccgtgcc gtttctgcgg tactggttgc
    17161 ggcgttctgg tcggaacgca gcagggacgt gtggtggcct gtcagggcga cccagacgca
    17221 ccggttaacc gtggcctgaa ctgcattaag ggctatttcc tgcccaagat catgtacggt
    17281 aaagaccgtt tgacgcagcc gctgctgcgt atgaaaaacg gtaaatatga caaagaaggc
    17341 gaatttaccc taatcacctg ggatcaggcc ttcgatgtga tggaagagaa attcaaaacc
    17401 gccctgaaag aaaaagggcc ggaatcgatc ggtatgttcg gttctggtca gtggactatc
    17461 tgggaaggtt atgccgcgtc caagctgttt aaagcgggct tccgttcgaa caacatcgac
    17521 ccgaacgcgc gtcactgtat ggcgtcggca gtagttggct ttatgcgtac ctttggtatg
    17581 gatgagccga tgggctgcta tgacgacatc gagcaggctg acgcgtttgt gctgtggggc
    17641 gcaaacatgg cggagatgca cccgatcctc tggtcgcgca tcactaaccg tcgtctctct
    17701 aatcagaacg tcaccgtggc ggtgctttct acctaccagc atcgtagctt cgagctggcg
    17761 gataacggca tcatctttac gccacagtct gacctggtga tcctgaacta catcgccaac
    17821 tatatcattc aaaacaatgc gataaatcag gacttcttca gcaaacacgt taacctgcgc
    17881 aaaggggcga cggacattgg ctacggttta cgtccgaccc atccgctgga aaaagcagcg
    17941 aagaatccag gttctgacgc ctccgaaccg atgagctttg aagattacaa agccttcgtt
    18001 gccgagtata cgctggaaaa aactgccgaa atgaccggcg tgccgaaaga ccagttagaa
    18061 caactggcgc agctgtatgc cgatccgaac aagaaagtca tctcctactg gacgatgggc
    18121 ttcaaccagc atactcgtgg cgtgtgggct aacaacctgg tctacaacct gcacctgctg
    18181 accggcaaaa tttcccagcc gggttgcggt ccgttctccc tgaccgggca accttctgcg
    18241 tgtggtactg cgcgtgaagt gggcaccttt gctcaccgtc tgcctgcgga catggtggtg
    18301 accaacgaga aacaccgtga tatctgcgag aagaagtgga atatcccgag cggcaccatt
    18361 ccggcgaaaa tcggtctgca cgcggtggca caagaccgtg cgctgaaaga cggcaaactg
    18421 aatgtttact ggaccatgtg taccaacaac atgcaggccg ggccgaacat caatgaagag
    18481 cgtatgccgg gctggcgcga tccgcgcaac ttcatcatcg tctccgatcc gtatccgaca
    18541 gtcagtgcgc tggccgccga cttgatcctg ccgaccgcaa tgtgggtaga gaaagagggc
    18601 gcttacggta acgccgaacg ccgtactcag ttctggcgtc aacaggtaca ggcaccgggc
    18661 gaagcgaaat cggatctctg gcagttagtc cagttctccc gccgcttcaa aactgaagaa
    18721 gtatggccgg aagatctgct ggcgaagaaa ccggaactgc gtggcaaaac gctgtacgaa
    18781 gtgctgtatg ccacaccgga agtgagcaaa ttcccggtat ccgaactggc ggaagatcag
    18841 ctgaacgatg aatcccgcga gctgggcttc tatctgcaaa aagggctgtt cgaagagtac
    18901 gcatggtttg gtcgcggtca cggtcacgat ctggcaccgt tcgatgacta ccacaaagcg
    18961 cgcggtctgc gctggccggt ggtgaacggt aaagaaacgc agtggcgtta cagcgaaggt
    19021 aacgacccgt acgtgaaagc gggcgaaggc tataagttct acggcaaacc ggatggcaaa
    19081 gcggtgatct tcgcactgcc attcgaaccg gcggcggaag caccggatga agagtacgac
    19141 ctgtggctct ctaccggacg cgttctggag cactggcaca ccggcagtat gactcgccgt
    19201 gtaccagaac tgcaccgcgc cttcccggaa gcggtcctgt ttattcaccc gctggatgcg
    19261 aaagcgcgcg atctgcgtcg tggcgacaaa gtgaaagtgg tttctcgccg tggcgaagtg
    19321 atctcgattg tcgaaacgcg cggtcgtaac cgtccgccgc agggcctggt gtacatgccg
    19381 ttcttcgacg ccgcacagct ggttaacaaa ctaacgcagg acgcgaccga tccgctctcg
    19441 aaagagacgg acttcaagaa gtgcgcagtc aaactggaga aggtgtaagc cattatgtcc
    19501 cggtcagcga aacctcaaaa tggtcgccgc cgctttctgc gcgatgttgt tcgcacagca
    19561 ggcgggctgg ctgccgtggg tgtggcgctg gggttacaac agcaaaccgc acgcgcatct
    19621 ggcgtgcggt tgcgcccgcc cggagccata aacgagaacg cctttgccag tgcctgtgtg
    19681 cgttgcggtc agtgtgttca ggcttgccct tacgacacct taaaactggc gacgctggcc
    19741 tctggtctgt cggcgggcac gccatatttt gtcgcacggg atattccttg cgaaatgtgt
    19801 gaggacattc cgtgcgccaa agtgtgcccg agcggtgcgc tggatcgtga gatcgaatcg
    19861 atcgacgacg cgcggatggg gctggcggta ctggtggacc aggaaaactg tctcaacttt
    19921 caggggctgc gctgcgatgt ttgttatcgc gaatgcccga aaattgatga ggccatcacc
    19981 ctggagctgg agcgcaacac gcgtaccggt aagcacgccc gctttctgcc gacggttcac
    20041 agagacgcct gtaccggttg cggtaagtgc gaaaaagtgt gcgtgctgga acaaccggca
    20101 atcaaggtgt taccgctgtc actggctaaa ggggagttag gtcaccatta ccgcttcggc
    20161 tggctggagg ggaacaatgg caaatcgtaa acgtgacgcc gggcgcgagg cgctggagaa
    20221 aaaaggctgg tggcgcagtc accgttggct ggtgttacgt cgcctttgtc agttcttcgt
    20281 gctggggatg tttttgagcg gtccgtggtt tggtgtgtgg atcttacacg gtaactacag
    20341 cagtagcctg ttattcgaca ccgttccgct gaccgatccg ctgatgacgc tgcaaagtct
    20401 tgccagcggt catctgcctg ccacggtggc gttgaccggt gcggtgatta tcaccgtgct
    20461 ctacgccctg gcaggaaagc gattattttg cagctgggtc tgcccgctga atccgattac
    20521 cgacttagcg aactggttac gcaggcgctt tgacctcaat cagtctgcga cgatccctcg
    20581 ccacattcgc tacgtgctgt tggtggtcat tctgctggga tcggccttaa ctggcacgct
    20641 catctgggaa tggatcaacc ccgtatctct gatggggcgc agcctggtaa tgggcttcgg
    20701 cagcggcgcg ctgcttattc tcgcgctgtt tttatttgat ctactggtcg ttgaacacgg
    20761 ctggtgcggg cacatttgtc cggttggcgc gctgtatggc gtgctgggta gcaaaggtgt
    20821 gattaccgtt gcggccaccg atcggcagaa atgtaaccgc tgtatggatt gttttcatgt
    20881 ttgcccggaa ccgcgtgtgc tacgtgcccc ggtgctggat gaacaaagcc cggtgcaggt
    20941 caccagccgc gattgcatga cgtgcggtcg ctgcgtggat gtctgttctg aggatgtatt
    21001 tacaataact acacgatgga gttcgggagc gaaatcatga aaagccatga cctgaagaaa
    21061 gcgctgtgtc aatggacggc gatgctggcc ctggtggtaa gcggcgcggt ttgggcggct
    21121 aatggcgtcg attttagcca gtcgccggaa gtatccggga cacaggaagg ggccattcgg
    21181 atgccaaaag agcaggaacg gatgccgctg aactatgtga atcagccgcc aatgatcccg
    21241 catagcgttg aaggttatca ggtaacgacc aataccaacc gctgcttgca gtgccacggt
    21301 gtcgaaagtt atcgcaccac tggcgcgccg cgcattagtc ctactcactt tatggacagc
    21361 gacggcaaag tgggcgcgga agtggctccg cgtcgttatt tctgtctgca atgtcacgta
    21421 ccgcaggccg ataccgcgcc aatcgtgggg aataccttta ccccatcaaa aggttacggg
    21481 aaataagagg ttattatggg aaattctgac cgtaagcctg gtctgattaa gcgcctgtgg
    21541 aaatggtggc gtacccccag ccgtctggcg ctggggacgc tgctgttgat cggttttgtt
    21601 ggcggcatcg tcttctgggg tggctttaac accgggatgg aaaaagccaa taccgaagag
    21661 ttctgcatta gctgccacga aatgcgcaac acggtgtatc aggaatacat ggattccgtg
    21721 cactacaaca accgtagcgg cgtccgtgcg acctgtccgg attgtcacgt tccgcacgag
    21781 tttgtgccga agatgatacg caagctcaaa gcaagtaaag agctgtatgg taaaattttt
    21841 ggcgttattg acacgccgca gaaatttgaa gctcatcgtc tgacgatggc acagaatgag
    21901 tggcggcgca tgaaggacaa taactcgcag gagtgccgta actgtcacaa cttcgagtat
    21961 atggatacaa ccgcccagaa atcggttgcc gcgaagatgc atgaccaggc ggtgaaagat
    22021 gggcaaacct gtattgattg ccataaaggg atagcgcaca agctgcccga tatgcgtgaa
    22081 gtcgagccag gtttttaaca gggttattgc gtgggtatgc ttgaagccag agagttactt
    22141 tgtgagcggg atgaacgaac cttatttagt ggcttgtcat ttacgctgaa cgcaggagag
    22201 tgggtacaaa tcaccggtag caacggcgcg gggaagacaa cgcttctccg tttgctgacg
    22261 gggttgtctc gccctgacgc aggcgaggtt ctctggcaag ggcagccctt gcatcaggta
    22321 cgcgacagct accatcaaaa cctgttatgg ataggccatc agccggggat caaaacccgg
    22381 ctgacggcgt tagaaaatct gcacttttat catcgcgatg gcgataccgc acaatgtctg
    22441 gaagccctgg cgcaggccgg gcttgccgga ttcgaagata ttcctgtaaa tcagctctcg
    22501 gccgggcaac aacgccgcgt cgctttagcg cgtctgtggc tgacccgtgc cacgttatgg
    22561 atcctcgacg agccttttac cgcgattgac gttaacggcg tcgatcgtct gacccagcgt
    22621 atggcgcagc atacggagca gggggggatt gtgattctga ctacccacca gccgctcaac
    22681 gttgctgaaa gtaaaattcg ccgcatttca ctgacgcaaa cgagggccgc atgatgttct
    22741 ggcgcatttt ccgtcttgag ctgcgtgtag cgtttcgcca tagcgccgaa atcgccaacc
    22801 cgctgtggtt cttcctgatt gtaattaccc tttttccgct cagtatcggt ccggagccgc
    22861 aactgctggc gcgtattgca ccgggcatta tctgggttgc tgcgctgctt tcatccttgc
    22921 tggcgctgga acgactgttc cgtgacgatt tgcaggacgg cagtcttgaa caattgatgt
    22981 tgttgccgtt acccttgccc gccgttgtgc tggcgaaggt gatggcgcac tggatggtaa
    23041 ccggtctgcc gttactcatc ctttcgccac tggtagcaat gctactggga atggatgttt
    23101 atggctggca agtgatggcg ctgacgctgc tgctgggaac gcctacgctt ggctttctcg
    23161 gtgcaccggg tgtggcgttg acagtgggac ttaagcgcgg tggtgtgctg ctcagcatac
    23221 tggtgttacc gctgactatc ccattactca tctttgccac cgccgcgatg gacgcggctt
    23281 ccatgcattt gcccgttgac gggtatctgg caattttagg cgcgttgctg gcaggcaccg
    23341 cgacattaag tccttttgcg acggcggcag cgttacgaat cagcattcaa taacgctgga
    23401 ttactgattt ttgttcgagt ctggtatcga aactatgtgg aaaacactgc atcaactggc
    23461 gatcccacca cggctgtatc aaatctgtgg ctggtttata ccgtggctgg caattgccag
    23521 tgtggtcgtg cttaccgtcg gctggatctg gggattcggc tttgctccgg ctgattatca
    23581 gcagggaaat agctaccgca ttatctacct gcatgtgcct gcggcgatct ggtcgatggg
    23641 tatttatgca tcaatggcgg tggcggcgtt tattggcctt gtctggcaga tgaaaatggc
    23701 caacctggcg gtggcggcga tggcccccat tggtgccgtg tttaccttta ttgccctggt
    23761 taccggctct gcatggggaa aaccgatgtg gggcacctgg tgggtatggg atgcacgtct
    23821 gacttctgaa ctggtgctgc tgtttttgta tgtgggtgtg attgccctgt ggcacgcctt
    23881 cgacgaccgc cgtctggcgg gccgtgcggc aggtatcctg gtgctgattg gcgtggtgaa
    23941 tctgccgatt attcattact ccgtggagtg gtggaacacc ctgcatcagg gatcaacgcg
    24001 gatgcagcaa agtatcgatc cggcgatgcg ttcgccgctg cgctggtcga tttttggctt
    24061 cctgctcctg tctgccacgc tgacgctgat gcggatgcgt aatttgattt tgctgatgga
    24121 aaaacgccgt ccgtgggtga gtgaactgat actgaaaaga ggccgtaaat gacccttgca
    24181 tttgcttcct ggaatgaatt tttcgcaatg ggcggttacg ccttttttgt ctggctggcg
    24241 gtggtgatga ccgttattcc gctggtggtt ttggtcgtgc actcggtgat gcagcatcgc
    24301 gcaattctgt gtggtgtgga gcaacagcgg gcgcgtgagg cgcgtttacg tgctgcgcaa
    24361 cagcaggagg ctgcatgaat attcgccgta aaaaccgctt gtggattgcc tgtgctgtgt
    24421 tggcaggttt ggcgctgacc atcggtctgg tgctgtatgc gctgcgctcg aatatcgatc
    24481 tcttttatac gccgggggaa attctctacg gcaagcgtga aactcagcaa atgccggaag
    24541 tcggtcagcg tctgcgcgtt ggcgggatgg tgatgccggg tagtgtgcag cgcgatccca
    24601 attcgctgaa agtgaccttc accatttacg acgctgaagg ctcagtggat gtctcttacg
    24661 aaggcatttt gccggatctg ttccgtgaag ggcagggcgt tgtggtgcag ggcgagctgg
    24721 aaaaaggcaa tcatatcctc gcgaaagaag tgctggcgaa acacgacgaa aactacacgc
    24781 cgccagaagt tgagaaagcg atggaagcta accaccgtcg cccggcgagt gtttataagg
    24841 acccagcatc atgatgccgg aaattggaaa cgggctgctg tgcctggcgc tgggaattgc
    24901 gctgctgctg tccgtgtatc cgctatgggg cgtggcgcgc ggagatgcgc gcatgatggc
    24961 gtcttcccgc ttgtttgcct ggatgctgtt tatgtctgtg gctggcgcat ttctggtgct
    25021 ggtcaatgct ttcgtggtca acgactttac cgtcacctat gttgccagca actccaatac
    25081 ccagcttccg gtgtggtatc gcgtggcggc tacctggggc gcgcatgaag gttcgcttct
    25141 gctgtgggtg ctgctgatga gcggctggac ctttgcggtg gcgattttta gtcagcgtat
    25201 tccgctggat attgtggccc gtgtactggc gataatgggg atggtcagcg tcggcttttt
    25261 gctgttcatt ctctttacct ctaacccgtt ctcacgcacg ctgccgaact tcccaattga
    25321 agggcgcgat cttaacccgc tgttacagga tccggggctg atcttccatc cgcctctgct
    25381 ttatatgggg tacgtgggtt tctcggtggc gtttgctttt gccattgcca ttgcttcttt
    25441 gctgagcggg cgtctggaca gcacttatgc gcgttttact cgcccgtgga cgctggcggc
    25501 gtggattttc ctgacgctcg gcattgtgct cggttccgca tgggcctatt acgaactcgg
    25561 ctgggggggc tggtggttct gggatccggt agaaaacgcc tcgtttatgc cgtggctggt
    25621 ggggactgcg ctgatgcact cactggcggt cactgaacaa cgcgccagct tcaaagcgtg
    25681 gacattactg ctggcaatca gtgccttctc gttgtgtctg ctggggactt tcctggtgcg
    25741 ttccggcgtg ctggtatcgg tacacgcgtt tgcctctgat ccggcacgcg gtatgtttat
    25801 cctcgccttt atggtactgg tgattggtgg ttcgctgctg ctgtttgccg cgcgtggaca
    25861 caaagttcgc tcacgcgtaa acaatgcgct gtggtcgcgg gaatctctgc tgttagcgaa
    25921 caacgttttg ttggtcgccg cgatgctggt ggtattactg gggacgctgc tgccgctggt
    25981 gcacaagcaa ctgggactgg gcagtatttc gattggcgaa ccgttcttca acaccatgtt
    26041 tacctggctg atggtgccgt ttgcgctgct gcttggtgtc ggtcctctgg tgcgctgggg
    26101 gcgcgatcgc ccacgtaaaa tccgcaattt attgattatc gccttcatct caacgctggt
    26161 gctgtcgctg ctgctgccgt ggctgttcga aagcaaagtt gtggcgatga cggtgctcgg
    26221 cctggcaatg gcctgctgga ttgctgtgct ggcaattgcg gaagctgcgc tgcgtatttc
    26281 acgtggcacg aaaaccacct tcagttattg gggaatggtg gcggctcacc tggggctggc
    26341 agtgacaatt gttggtattg cctttagcca gaactatagc gttgagcgtg atgtgcgcat
    26401 gaagtccggc gatagcgtcg atattcatga atatcgcttc accttccgtg atgtcaaaga
    26461 ggtgactggc ccgaactggc gcggcggtgt ggcgactatt ggcgtaacgc gagagggtaa
    26521 accggaaacg gtgctgtatg cggaaaaacg ttattacaac actgccgggt cgatgatgac
    26581 cgaagcggcg attgacggcg gcatcacgcg tgacctgtac gccgcgctcg gtgaagagct
    26641 ggaaaacggc gcgtgggccg tgcgtcttta ctacaaaccg tttgttcgct ggatttgggc
    26701 gggcgggctg atgatggcgt tgggcggact gctgtgtctg tttgatcctc gctatcgtaa
    26761 gcgcgtgagt ccgcaaaaaa ctgcgccgga ggctgtatga agcgcaaagt attgttaatt
    26821 ccgttgatta tcttcctggc gattgccgcg gcgctgctgt ggcagctggc gcgtaatgcc
    26881 gaaggggatg atccgaccaa tctggaatcg gcgctcattg gcaagccagt gccgaagttt
    26941 cgcctcgaat cactggacaa tccggggcag ttttatcagg cggatgtgct gactcagggc
    27001 aaacctgtgc tgcttaacgt ttgggctacc tggtgtccga cctgccgtgc ggaacatcaa
    27061 tatctgaatc agctttctgc gcagggcatt cgcgtggtcg gcatgaacta taaagacgat
    27121 cgccagaagg caataagctg gctgaaagag ctgggcaatc cttacgcgct aagcctgttt
    27181 gatggcgatg gcatgttagg gctggatctc ggtgtctatg gcgcgccaga aacgttcctc
    27241 atcgacggca acggcatcat tcgctatcgc catgcgggcg atctcaatcc tcgcgtctgg
    27301 gaagaagaga tcaagccgct gtgggagaaa tacagtaagg aggccgcaca atgaggtttt
    27361 tattgggcgt gctgatgctg atgatctccg gctcagcgct ggcgaccatc gacgtgttgc
    27421 agtttaagga tgaagcgcag gagcagcagt tccgccaact cactgaagaa ctacgctgcc
    27481 cgaaatgcca gaacaacagc attgccgatt ccaactcgat gattgccacc gacctgcgcc
    27541 agaaagtgta tgaactgatg caggaaggta aaagtaaaaa agagattgtc gattatatgg
    27601 tggcgcgtta cggcaacttc gtcacttacg atccgccgtt aacgccgctg accgtgctgc
    27661 tgtgggtgct tccggtagtg gctattggca ttggcggttg ggtcatttac gcccgttcgc
    27721 ggcgtcgggt acgcgtggtg ccggacgcgt ttcctgaaca aagcgtgccg gaaggtaagc
    27781 gtgccggata tattgtttat ctgccgggta ttgtggtggc gttaattgtg gctggcgtca
    27841 gctactacca gactggcaat tatcagcagg tgaaaatctg gcagcaggcc acggcacagg
    27901 ctccggcgtt gctggacagg gcgctggatc cgaaagccga tccgctcaac gaagaagaga
    27961 tgtcgcgtct tgcgctgggg atgcgtactc aactgcaaaa aaatccggga gatatagaag
    28021 gctggattat gttgggccgc gttggcatgg cgctgggtaa cgccagtatc gccaccgatg
    28081 catacgctac tgcgtatcgc ctcgatccga aaaacagtga tgccgcactg ggttatgctg
    28141 aagcgttgac acgttcatct gatcccaacg acaaccgcct cggtggtgaa ctgctgcgcc
    28201 agttggtgag aacggaccat agcaatatcc gtgtgttaag catgtatgcg tttaatgcct
    28261 ttgagcagca gcgatttggc gaagccgttg ccgcgtggga gatgatgttg aaactcttat
    28321 ctgccaacga tactcgccgt gcggtgattg aacgtagtat cgcgcaggcg atgcaacatt
    28381 tgtcgccgca ggagagtaaa taaaaagagg cccgatggtg atgccatcgg gctattttta
    28441 ttgtgccccg cgttgttgca ggaacagaat ggtggctgcc acgcgtgagc ggacattgag
    28501 tttgcgcagc agattgcgaa tatgtacttt tactgtctgc tctgaaatat tcaacaccga
    28561 ggcaatctgt ttatttgaca gcccctgtgc cagctcgtgc agaacatcca gctcgcgctc
    28621 cgtcagcacg ctgaagggat cttcttccgc gccaaacatt tcacgttcac gtaagtactg
    28681 attgacgcgt tcgctaaaga ctttgctgcc tttcgctcca gcacgaattg cttccagcaa
    28741 tacttccggg tcgctgtctt tcaacagata accgtctgcg cctgcgtcta tcagcgcaaa
    28801 gacatcgctg gaggcatctg atacggtcag gataataatt tgcgcggtaa cgccatccct
    28861 gcgcaaggca ttgagggtat ccaggccact catacctttc atattgagat ccagcaagat
    28921 cacgtcgata tccagtctat ttgccagatc gatcgcgctc gcgccgtcgc ccgcttcggc
    28981 gaccacttca aagctaggat caagctccag taactgacga acaccgcgtc gcataagtgg
    29041 atgatcatcc acaatcatca cctgaaaagg cgttgcttca ggcatagtag tctcctgggg
    29101 ttttattaga atcattatgt ttgagcgtag cgttggtaac gctaccaggc gcgtgaatgt
    29161 taccccattt tatgtatgga catgtagtga aaactacaac cttgtcgttc gctttggcat
    29221 cattttcatt ataaagacgg aattttgcat cagcttc
//
LOCUS       DADKRT010000030        28456 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.030, whole genome shotgun sequence.
ACCESSION   DADKRT010000030 DADKRT010000000
VERSION     DADKRT010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 28456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28456
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.030"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..193)
                     /locus_tag="JQ356_001140"
     CDS             complement(<1..193)
                     /locus_tag="JQ356_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HAY4621304.1"
                     /translation="MFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTL
                     EAFHKFTSKHASPIHSSEGI"
     gene            complement(329..3448)
                     /locus_tag="JQ356_001141"
     CDS             complement(329..3448)
                     /locus_tag="JQ356_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000580159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4621305.1"
                     /translation="MIGQFLSATEILAKNYVRNKMVKNPFYSNLKWNFIEKNIIRLTS
                     SPVKSVLCISAFSFVLLYVGYLNELFIKNNLLHYFPFRHSLTEWQTTILSGQLTIIGI
                     VYPLVIGLVSVLFQKKADRKIAQTAYQRYSGFMLAGLSGLFLSGFILLSVLIKTVFGS
                     YLYGIACLISILWLLINIVLSIWFFIVSLEILDDVKRQIIIKRYIAFEIVMPHICNKI
                     SAKLRLYPIYQKHNYSNLEITQADYKGEYISVASSYSKEDELSLYHRPFQLTLNLINY
                     QLKKKNHFASFVIGDNRTKETESTGKILFSVKNIKPDSLLIKILKQCFYRAPIKGGDF
                     SVSLTMQAITADTYMYLRDSDLISFDNAISALINNFNNLCDLYFFQDDNTNNNFLLIT
                     TELFERSFQYEFSDEVYKISNNSMDKINLSERFFELCLWSGVRIINNRKHLISNELCI
                     YMGITRSQWSILTEWFRNNQSLLNASLRSRYNRILRTYITVWEQYQESINFRFCNTEN
                     SDLFELFCKTQLQELPSMIIDATQTRDPSTIDTAVDLINRWQHSMNIDSHSVEKYSYK
                     GQLFNPGFFISKKLNFNSDREWFNIAIINALTDMRICTCLYLTSRINTSDKLMTHYIK
                     LILEGKLIDQTGGYETPTEEIDNASQLIKILIRICLWTWSENMEHNGWMNSLARRLRD
                     YDKTDMVMGRVYSNVFDCGFIDMEQSWVQLLLIFSNKNDSVSKEIKEAIENNYITYRE
                     KQRLIGVLSKICNSIEYTKIKLTLTLDDLQTKKENLRKLLQEHINMLKKDLDMRLQDA
                     AIDVHRLDSTARKTSEHLRKRIKKTLPLSLFKSIDFKQASDCFTKHKISIKIDKEPYA
                     EGIESIPYINEGDIQADLILKDIQRIILSNLFSTGCSQHTVIEDFNMLIDHIKSSADL
                     AGKLVLVMSKEIFQQYNRMLFDNPNLRELMRKNDDGSMNITTESGTRKVYFLPFVNQP
                     FSLVVKDNYFTKLIIREYDNNKLVNVTSENIKSDSDKFKLTLNYELNIVFEGNADLKI
                     AHSQRVTSE"
     gene            complement(3697..4806)
                     /locus_tag="JQ356_001142"
                     /pseudo
     CDS             complement(3697..4806)
                     /locus_tag="JQ356_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494339.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
     gene            4964..6148
                     /locus_tag="JQ356_001143"
     CDS             4964..6148
                     /locus_tag="JQ356_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HAY4621306.1"
                     /translation="MSETRFHGARVTENTDLVTAINDVDSSVIGIVATADDADAKLFP
                     LNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLV
                     IGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIADKLRAFVY
                     ASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKNGKNETFPAPAYACGLRAYID
                     HEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNR
                     TPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAG
                     KLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEYFEPAFAVLG
                     GA"
     gene            6148..6658
                     /locus_tag="JQ356_001144"
                     /pseudo
     CDS             6148..6658
                     /locus_tag="JQ356_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310671.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
     gene            6714..7088
                     /locus_tag="JQ356_001145"
     CDS             6714..7088
                     /locus_tag="JQ356_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000651574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621307.1"
                     /translation="MKDIDTETRNNTVADNVTAVEDMAVERGVKLTRPIERGGEKITY
                     VEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLC
                     AVAVNFMSEPDSGAKSVQETAA"
     gene            7097..7201
                     /locus_tag="JQ356_001146"
     CDS             7097..7201
                     /locus_tag="JQ356_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000333494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY4621308.1"
                     /translation="MCFEHIEDLVADIAAIFNWSPAEIFMMTPGEVVS"
     gene            7239..10046
                     /locus_tag="JQ356_001147"
     CDS             7239..10046
                     /locus_tag="JQ356_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY4621309.1"
                     /translation="MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNL
                     ERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLER
                     LNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVT
                     RARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRID
                     QNSPQFKALREQALKLGSETQFTAGDAASGQAFLAMAGFTPQAIQAALPGVLSMATAG
                     GMDLGETADIGSNILTQFGLSADQMDRVGDTLTAAFTRTNTDLRALGETMKYAGPVAG
                     KLGISLEQAAAMAGVLANMGIRGSDAGTAMRASLARLASPPKAAAEALKELGVSVSDA
                     GGKMRPMEDVLADLYKATRKYGEVDRVSFFKDIAGEEAFTSFMALVDAAGDGSLPKLR
                     KELEGARGEAERTAKVMANNLDGDLKSLSSAWEGLRIRIADLIDGPLRSVTQWLTRVV
                     SKVTALAQAHPALTRQLLIAGGALLAMTATVGSLSLAIGVLAGPLAKLRLGFSLLTGS
                     MNAVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFA
                     GVFSGIMERLTPLRETFERFGPVFDAIGSGISQVFNWFKSLLSPMESSKETLDKCTSA
                     GEIFGNVLGGALQLVLTPAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQD
                     KVALLQGDLAKINPPKPVENGNGTGGDNPKDNKPLTDSNTGTLRRLSKIADNTGKLVE
                     ETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPAPAINITPVVPAPLPPALVPV
                     VAASSRPVAEAIRSPVASVPVTSRNREPVAFGFGGEIHVHLHNVVTQNPRELAKLVGE
                     MVRAEMERRARAGRGCFYDKD"
     gene            10059..10547
                     /locus_tag="JQ356_001148"
     CDS             10059..10547
                     /locus_tag="JQ356_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001761054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621310.1"
                     /translation="MMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIG
                     AGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTR
                     SEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKG
                     LF"
     gene            complement(10576..11174)
                     /locus_tag="JQ356_001149"
                     /pseudo
     CDS             complement(10576..11174)
                     /locus_tag="JQ356_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905087.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            11953..12486
                     /locus_tag="JQ356_001150"
     CDS             11953..12486
                     /locus_tag="JQ356_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000972171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4621311.1"
                     /translation="MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNF
                     QPDTLKMVYYHNGVIICIEKDVSAINPEGASVVELPDITANRRADISGKWLFKDGVVI
                     KRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV
                     ESTDTSSLPVTFPEQPE"
     gene            complement(12515..13078)
                     /locus_tag="JQ356_001151"
     CDS             complement(12515..13078)
                     /locus_tag="JQ356_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000930007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4621312.1"
                     /translation="MAHGITSHRCKLCSILKNIKSGNPKTKEQYQLTKNFDVIWLWSE
                     DGKNWYEEVNNFQDDTIKIVYDENNIIVAITKDAPTLNPEGFSVVEIPDITANRRADD
                     SGKWMFKDGTVVKRIYTADEQQQQAESQKVALLSEAESVIQPLERAVRLNMAMDEERT
                     RLESWERYSVLVSRVDTANPEWPQKPE"
     gene            complement(13047..15197)
                     /locus_tag="JQ356_001152"
     CDS             complement(13047..15197)
                     /locus_tag="JQ356_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621313.1"
                     /translation="MSTTTRKFKTIITDTGAKKLAQVAAPDGKPVRLTHMAVGDGGGT
                     LPTPDSKQTRLVHEVWRHTVNRVILDATHQNRIIAELVIPPETGGFWIREIGVFDEHG
                     DLIAVGNTAESYKPAVAEGSGRAQTFRTILTVSSTATVALTVDNTMVMATVDYVDDKL
                     KEHEQSRRHPDASLTAKGFVQLSSATNSVSETQAATPKAVKAAYDLANGKYTAQDAST
                     TRKGLVQLSSATNSTSETQAATPKAVKAAYDLANAKYTAQDATTAQKGIVQLSSATNS
                     TSETLAATSKAVKAVMDETNKKAPLNSPALTGTPTTPAARQGTNNTQIASTAFVMAAI
                     AALVDSSPDALNTLNELAAALGNAPNFATTMTNALAGKQPKDATLTALAGLATAADRF
                     PYFTGNDVASLATLTKVGRDILAKSTVAAVIEYLGLQETVNRAGNAVQKNGDTLSGGL
                     TFENDSILAWIRNTDWAKIGFKNDADGDTDSYMWFETGDNGNEYFKWRSRQSTTTKDL
                     MTLKWDALNILVNAVINGSLGVGSTNALGGSSIVLGDNDTGFKQNGDGILDVYANSQR
                     VFRFQNGVAIAFKNIQAGDGKKFTLSSSNNSTKNATFNLWGASTRPVVAELGNEAGWH
                     FYSQRNTDNSVIFSVNGQIQPSNWGNFDSRYVKDVRLGTRVVQLMARGGRYEKAGHAI
                     TGLRIIGEVDGDDEAIFRPIQKYINGTWYNVAQV"
     gene            complement(15200..15730)
                     /locus_tag="JQ356_001153"
     CDS             complement(15200..15730)
                     /locus_tag="JQ356_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HAY4621314.1"
                     /translation="MSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHL
                     LPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEW
                     WEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
                     AAATYDGEVITIYPGD"
     gene            complement(15723..16619)
                     /locus_tag="JQ356_001154"
     CDS             complement(15723..16619)
                     /locus_tag="JQ356_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY4621315.1"
                     /translation="MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVS
                     AALELESEPLNVIAQTMSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLV
                     ITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
                     PANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLY
                     FYPGPESEPILAAAESSFRKWLAEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNM
                     AISDIQAARCASFTISEGGRNE"
     gene            complement(16623..16973)
                     /locus_tag="JQ356_001155"
     CDS             complement(16623..16973)
                     /locus_tag="JQ356_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY4621316.1"
                     /translation="MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYG
                     SLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVM
                     QTMQNVELTITLRE"
     gene            complement(16970..17551)
                     /locus_tag="JQ356_001156"
     CDS             complement(16970..17551)
                     /locus_tag="JQ356_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HAY4621317.1"
                     /translation="MSAELMRLLSNIIRTGIISEVDEKSWRVRVRSGELETGWLRWNT
                     SRAGAFNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDAIPAPGKSLKEIVVSAPDG
                     AVFRYDADAGALSASGMKTATLQASVSVTLDTPVVECTDLLRTATLDVTKGGKMSGNI
                     THSGGNFTSNGITVHTHKHGGVKGGSDSTGGPQ"
     gene            complement(17548..18183)
                     /locus_tag="JQ356_001157"
     CDS             complement(17548..18183)
                     /locus_tag="JQ356_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY4621318.1"
                     /translation="MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIR
                     PQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNS
                     IRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA
                     RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERLIYNTVLGRIAEAVR"
     gene            complement(18176..18643)
                     /locus_tag="JQ356_001158"
     CDS             complement(18176..18643)
                     /locus_tag="JQ356_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621319.1"
                     /translation="MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFV
                     YRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADL
                     LFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG"
     gene            complement(18781..19188)
                     /locus_tag="JQ356_001159"
     CDS             complement(18781..19188)
                     /locus_tag="JQ356_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HAY4621320.1"
                     /translation="MKLWPTLGVAFLLTAGWGTSMRLSWSLGRENARNEAQASTLKST
                     ADTLNIISAGVQDMQQVLAQLRVENQQRNQDGEVRREQLRNDIAKDECAHALPDARFT
                     DRLRRHAERATASAVSPAYTADADHTGNASPLP"
     gene            complement(19185..19577)
                     /locus_tag="JQ356_001160"
     CDS             complement(19185..19577)
                     /locus_tag="JQ356_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HAY4621321.1"
                     /translation="MSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLR
                     SRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQMSWEWPLYEKIAAAFRQASREL
                     NIPVEWGGDWKTLKDGPHFQLPHGAYPA"
     gene            complement(19574..19897)
                     /locus_tag="JQ356_001161"
     CDS             complement(19574..19897)
                     /locus_tag="JQ356_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY4621322.1"
                     /translation="MSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTL
                     VQTVTGSLACGVLAMAVAGSLRFFGFPEDAVTFIGASIGFMGAEKARDKVIAAFNRRV
                     KEKDE"
     gene            complement(19900..20100)
                     /locus_tag="JQ356_001162"
     CDS             complement(19900..20100)
                     /locus_tag="JQ356_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4621323.1"
                     /translation="MKVKALEGDTVDSLCFRYYGTTQGVTEKVLDANPGLCQQVFLDA
                     GQEVEMPEPEKKKREMIQLWGE"
     gene            complement(20100..20594)
                     /locus_tag="JQ356_001163"
     CDS             complement(20100..20594)
                     /locus_tag="JQ356_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HAY4621324.1"
                     /translation="MTIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAV
                     RLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWH
                     WRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIF
                     AELC"
     gene            complement(20762..21508)
                     /locus_tag="JQ356_001164"
     CDS             complement(20762..21508)
                     /locus_tag="JQ356_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004983471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HAY4621325.1"
                     /translation="MITPAQQHWQNVMAQRAGRANEGVDHAARTAHEEVLYRLRLAQA
                     RLKGVQARSAKAAIKKELLPDFSGWIEGTLEADGGQQDEVIATLMVWAIDCGDLPLAL
                     RIGAYVVRHNLIMPDNFGRTAATVLTEEICNPVLTQAGTDADADLSAFIEPLDTLREI
                     VTDQDMPDEVRAKLCKACAFARRGLSDADSMALSLKLLREAMHLNPNAGVKREIATLS
                     RALKKADSAAEPEDASAQQAQDESSKKQQK"
     gene            complement(21554..22426)
                     /locus_tag="JQ356_001165"
     CDS             complement(21554..22426)
                     /locus_tag="JQ356_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005136493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HAY4621326.1"
                     /translation="MIGVTDQKGEKILLDTTGPIARTNTSYDGTKRRNPNNVVDLKNR
                     KYQCEQVNYDTFISYPQLDAWSAHPDFQSRISAQIARQVALDRIMIGFNGTSHADESN
                     FSTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHAGKYANADALVQDAR
                     SSLLDEWHKEADDLVVIMGRNLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGL
                     GVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDY
                     GKCAMVTGLKFADS"
     gene            complement(22423..22605)
                     /locus_tag="JQ356_001166"
     CDS             complement(22423..22605)
                     /locus_tag="JQ356_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005054714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid protein"
                     /protein_id="HAY4621327.1"
                     /translation="MNLVMSDITRNKLGCYMAQQVSLNNIPVSALVSRFTVEPAVQQR
                     FENASKESTEFTKKIT"
     gene            complement(22629..23465)
                     /locus_tag="JQ356_001167"
                     /pseudo
     CDS             complement(22629..23465)
                     /locus_tag="JQ356_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262634.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
     gene            23620..25371
                     /locus_tag="JQ356_001168"
     CDS             23620..25371
                     /locus_tag="JQ356_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY4621328.1"
                     /translation="MIQDAFVRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQW
                     DETPPGQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKG
                     RAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGAT
                     WYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKI
                     ILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFS
                     TPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVV
                     NHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCGVDGYDDWKDWKP
                     FAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPSVPGGRFRTVETRRVQGLEFEEQ
                     ARVIEEFTCRYNVEHIGIDVTGGNGEAVYQIVKRFFPAAIPYTFTLSSKRSLVLKMLQ
                     IMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITYETDRARGISHGDLAWATMLAVIN
                     EPIGGEGENERFTVMEF"
     gene            25371..26407
                     /locus_tag="JQ356_001169"
                     /pseudo
     CDS             25371..26407
                     /locus_tag="JQ356_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000087802.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            complement(26886..27476)
                     /locus_tag="JQ356_001170"
     CDS             complement(26886..27476)
                     /locus_tag="JQ356_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY4621329.1"
                     /translation="MSEINYQALRERYSPVPVPKCPICGEEMSIQRISGAQVVYACSG
                     YGDDGDFKIGRTLADKHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYA
                     LKFQKAQDALKHAALLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIK
                     AGGKALWQEKHEDRTHQSCDVNCGWFSPLTTDKNNT"
     gene            complement(27540..27851)
                     /locus_tag="JQ356_001171"
     CDS             complement(27540..27851)
                     /locus_tag="JQ356_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012907691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein"
                     /protein_id="HAY4621330.1"
                     /translation="MTTPTRRISFYLKPTAVKNEGEACAWLDSLTPEARKSGQRVAFL
                     AGLALLKMNPAEAYRLAAWAGDEALSVTQTRTERPASQPVSTAQITSQMAGNIRALFP
                     E"
     gene            complement(27856..>28456)
                     /locus_tag="JQ356_001172"
     CDS             complement(27856..>28456)
                     /locus_tag="JQ356_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="stability/partitioning protein"
                     /protein_id="HAY4621331.1"
                     /translation="KKANVMRPVEYQNGEAFTIRNVQVMPESIPAGFKALADMSPFES
                     LLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSHHIAN
                     TIIEHRHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAVFSGYGRVMVVGG
                     GAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE"
BASE COUNT         6529 a         7161 c         7398 g         7368 t
ORIGIN      
        1 ggatgccctc tgatgagtga atgggggagg cgtgctttga agtgaatttg tggaaggctt
       61 ccagtgttga gaaacatacg ccgcattcta gattgttaca ctgataatac ttttgtctca
      121 cggtgtttga atcattttcc ggacgactgg tgcggatacg ggcagatgcg ccacaaagcg
      181 gacaacggaa catagcgacc tctcttattg tagtgcttac actattctag gttgtattct
      241 ctaagattta aacatgactt tctctatata atgattttta gcattagtta ataaacgaac
      301 ggcactctaa ggagcgccgt caaagatatt attctgatgt cactctttgc gagtgagcta
      361 tttttaaatc agcgtttcct tcaaatacta tattcaactc atagttaaga gttagcttga
      421 atttatctga gtcacttttg atattctctg aagtgacatt tactaactta ttattatcat
      481 attctctaat aattaattta gtgaagtagt tatcctttac cacaagagaa aatggttgat
      541 taacaaatgg taagaagtaa accttacggg taccggattc agtagttatg ttcatagagc
      601 catcatcatt ttttctcatt agttctctga ggttgggatt atcgaaaagc atacgattat
      661 attgctgaaa gatctcttta ctcatcacaa gaaccagttt gccagccaag tcagcagatg
      721 attttatgtg atcaatcaac atattgaaat cttctattac ggtatgttgc gaacagccag
      781 tgctaaataa atttgaaagt attattctct ggatgtcctt gagaattaag tctgcttgaa
      841 tatcaccttc attgatataa gggatggatt ctattccttc ggcatacggt tctttatcta
      901 tcttaataga tatcttatgt tttgtgaaac aatcgctagc ctgcttaaaa tcaatagatt
      961 tgaaaagtga aagagggagc gttttcttga tgcgtttacg aagatgttct gatgttttac
     1021 gtgcagtgct atctagtcga tgtacatcta tggcagcatc ctgaagtctc atatcaagat
     1081 ctttctttag catgttaata tgctcttgaa gcaactttct taagttttct ttttttgttt
     1141 ggagatcgtc caatgttaaa gtcagcttga ttttagtgta ttcgatggag ttacaaattt
     1201 ttgataatac tccaatgagt cgttgcttct cacgatatgt tatatagttg ttttctattg
     1261 cttcttttat ttcttttgat acgctatcgt tcttgttaga aaaaattaat aatagctgaa
     1321 cccatgattg ttccatatca ataaatccac agtcaaaaac attactgtaa actctgccca
     1381 tcaccatgtc tgttttatca tagtcacgta aacgccttgc taaactattc atccacccat
     1441 tgtgctccat attttcagac catgtccaca ggcagattct aattaatatc ttgattagtt
     1501 ggcttgcatt atcaatttct tcagtgggag tttcatatcc accggtttgg tcaataagtt
     1561 taccctctaa aataagttta atgtaatgtg tcattagttt gtcagaagta ttgattcttg
     1621 atgtcagata aagacatgtg catatacgca tgtcagtcaa cgcatttatg atggcaatat
     1681 tgaaccactc tctgtctgaa ttgaagttta gttttttgga tatgaaaaaa cccgggttaa
     1741 aaagctggcc tttgtaactg tatttttcta ccgaatggct gtcaatattc attgagtgct
     1801 gccatcggtt aataagatcg acggctgtat caatagtaga aggatcgcga gtctgtgttg
     1861 catcaataat catcgatgga agttcttgta gttgcgtttt gcaaaataat tcaaataaat
     1921 ctgaattctc tgtattgcag aaacgaaagt ttatgctttc ttgatattgc tcccaaacag
     1981 tgatataggt tcttaatata cgattataac gtgaacgaag cgaggcattt aagagtgatt
     2041 ggttgtttcg gaaccattct gttaatattg accattgtga acgagtaatt cccatataga
     2101 tacaaagttc attgctgata agatgttttc tattattgat aatacgcact ccgctccaaa
     2161 gacataattc aaaaaatctt tcagaaagat taattttatc catggaatta tttgatattt
     2221 tataaacttc atctgaaaac tcatattgaa aactccgttc aaataattct gtagtgatca
     2281 gtaagaagtt attgttggta ttatcatctt gaaaaaaata caaatcgcag agattattaa
     2341 agttattaat taatgcagag atagcattgt caaaactaat gagatcagaa tcccgcagat
     2401 acatatacgt atctgctgtt atagcctgca ttgtaagact tacggaaaaa tctcctcctt
     2461 taatcggagc cctataaaaa cattgcttaa gtatttttat taataagctg tctggtttga
     2521 tatttttaac gctaaaaagt atcttacccg tggattctgt ttcttttgta cgattatcac
     2581 caatgacaaa tgacgcaaaa tgattcttct tttttagttg gtaattaata agattaagag
     2641 taagttgaaa aggacggtga tataaactta actcatcttc cttagaataa ctgctagcca
     2701 cagatatgta ttctcctttg taatcggctt gcgtgatttc taaatttgaa tagttatgtt
     2761 tttgatagat agggtataac ctaagcttgg ctgatatttt gttacaaata tggggcatta
     2821 ctatttcgaa ggcaatgtat cgctttataa ttatttgccg ttttacatca tcaagaattt
     2881 caagactcac gataaagaac caaatagaaa gaactatgtt tatcaaaagc cataatatgc
     2941 tgattagaca agctatacca taaagataac ttccaaagac agttttaatt agtacactga
     3001 gaagtataaa tcctgataag aaaagcccgc tgagtccagc aagcatgaat cctgagtaac
     3061 gctgataagc agtttgggct atttttctat ctgccttttt ttggaataag acacttacta
     3121 aacctataac aagggggtat acaataccaa taattgtcaa ttggccactt aaaatggttg
     3181 tttgccattc ggttaatgaa tgcctaaacg ggaaataatg taaaagatta ttttttataa
     3241 ataattcgtt taaatatcca acataaagta gtacaaatga aaaagctgat atgcaaagta
     3301 ctgatttaac cggtgaggat gttaatctta tgatgttttt ttcaataaaa ttccatttta
     3361 aattcgaata aaatggattt ttaaccattt tattacgaac atagttcttt gctaaaatct
     3421 ctgttgcact taaaaattgt ccaatcatga attactcttc tataaagtgt gggtctacta
     3481 actaaactgg aacttttact attgagtcat attcccttgg acgggatgga ctgtgaagat
     3541 tatacttgac ttcctctgtc atgtgggaaa aacatccgta ttattgttag catctggttg
     3601 atgccccaac ctctgacatc tagtgggctg atacattatc ttttgttctt actgtcagtg
     3661 tagaagcaca tctcaaaaat aatattttta agagatttat tctgtttctg ctatccattc
     3721 cgggattttt gcttcaagtt caagctgcgt ggtaaagccg ctgttatcaa tggtgtgctc
     3781 ggcttttgca atagtccagt cctgataatc aatctcgctt ttaaagcctg tcactgtgcc
     3841 atgcatttcg ggatagagtt ctgcacgacc acgcgccagc gtgatggaga atgatgcggc
     3901 tccgcgttgt agctgctgcc actttgccgc cgctgcgcgt cttgctgcct gctcgttctg
     3961 ataagtcttg cgtaacacaa acacgttgcc ttccgcacct tccatatagt cgccttcccg
     4021 actgctgctt ttctcctttt tgggttttgg cggtttgcgg cgtttcacgc tgactttttt
     4081 ctttttcccg taattaagat caagccagta ggcgcgtacc cccgtatacg cctcgcggtc
     4141 agcaatgcgg aactgatggc gatcgccgct gctgcgtgta atggcgaacg agggcaacgg
     4201 ctgcccctgt gcgttcacgc caccacctgg catgatgaat aacagattgc cgctttttac
     4261 cgtggcgatt gctcccagca tttccgccat gcgcgtaaga aaggacatgt cgctttcttc
     4321 ggtctggtcg gcgtggtcga tttcgatatc catcagcatt tcgctgattt gcggtttcag
     4381 accgtaccga tgagtgatgg cggataccac acgctcaacg gtcacatcat gccaggacac
     4441 ctcacgttta acgttaaatt catcccgaaa atctgcgctt ctggctgaaa cagtcagcct
     4501 gtccggcggt ccttcgtgag cgatttcatc aacaatgtaa gtgccttttt ctgtcagcgg
     4561 ttcccctttc cagccaatga gaaccgtcag acgcgcgccc cgtggcggta gctgcaactg
     4621 accatccgca tcatccagcg tgatggtgag ctggtccgcc tcaaatcccc ggttgtcggt
     4681 cagttacagg ctcatcaggc gctccgccac gcctgacagc gttttaccct ccgagagaat
     4741 atcaaaatcc ggcattttca cgggggccgt gccctgactg agcaattgca tggtggtgtc
     4801 ggtcatctgc tccctccctg tgcggcatgg tcgcatgtgc gtgcggaggg ggttactgct
     4861 ttttgttgtc gccgtggcgg gagaacggcg caggggtgag attacgcgcg tggtgggtga
     4921 tgattgttgc tgaatcattt aacggataca aggggctgaa gctatgagtg aaactcgttt
     4981 tcatggtgcc cgtgttacgg agaataccga cctggtaaca gcgattaacg atgttgattc
     5041 cagcgttatc ggtatcgtgg caacggcgga tgatgcggac gcgaagctgt tcccgctgaa
     5101 caagcccaca ctgctgaccc gcgtcaatga cgtgctggga aaatgcggga caacggggac
     5161 gctttatcgt gcgcttaagg ccatcgcaga ccaggtgagc acaaaggtga tcgtcgttcg
     5221 cgtggctgaa cacaaagaag aagacggaaa gacgcaggat caactggtta tcggtggttc
     5281 tgaggatgac ggcagctata cggggatgta tgcgctgctt gttgcagagc aggatgaaag
     5341 catcggatac cgtccgcgta ttctggccgc gccggagctg gacacggagg cggtaacaaa
     5401 atccctgtgc gtgattgcag ataaactgcg cgcgtttgtg tatgcctcat gtcatggctg
     5461 taacacgatg gccgaggcaa ttacctaccg ccagaaattc aacgaacgtg aggtgatgct
     5521 cttatggccg gacttcatcg cctacaaccc gaaaaatggc aaaaacgaaa cgttccccgc
     5581 gcctgcctat gcgtgcggcc ttcgtgcgta cattgaccat gaacagggat ggcacaaatc
     5641 gctgtccaac gttccggtta aaaatgtgct ggggatgtcg aggcatgtgt tctggtcgtt
     5701 gcaggccgaa gacagcgatg ccaacagcct caacaacaaa gaaatcacga ccattattcg
     5761 tcgcaacggg ttccgcttct ggggtaaccg cacaccggaa acgaacgcct acatctttga
     5821 ggtgtatacc cgaaccgcac aggtgctggc tgattcaatt gcggaagcgc agtttgaaac
     5881 catcgacagt ccactgacgc ctgcgaatgt gaaggatgtt atcagtgcca tcagggcaaa
     5941 actggattca ctggtgactg ccgggaaact gattggcgcg gagtgctggt atgacgtggt
     6001 ggataacagc accacggatt tacgtcaggg acgtgtgcgt attcgctaca aatatacgcc
     6061 cgttccgcca ctggaagaca tggagcttta ccagacgttt actgatgaat actttgaacc
     6121 cgcatttgcg gtgctgggag gtgcctgatg gctgtgccaa aacatcttcg cttttttacg
     6181 ctgtttgtgg atggtgaaaa cgaagtgggt aatgtgacgt ccgtcactct gcctaagctg
     6241 acgcgcaaaa ccgacagcta ccggggtggt ggcatgatgg gtgcggtaag tattgatctc
     6301 ggtctggacg actccgcgct tgatgcgagc tttgtcatgg gggcgcagtt cgtgagctgt
     6361 tccttaagta tggcggcacg attgacggca cgctgctgcg ttttgcgggt gaatactaca
     6421 ccgatgcaga aagcgacctg tatgaagtcg aaatgcgcgg acgtgtgacg gaaattgata
     6481 tgggggaagc caaacagggc gaagccacat cacacactta cgccattaaa acacctacta
     6541 caagctgagt gttaacgatc gcccgttgtg ggagattgac ctgctgaact tcatttaccg
     6601 gaaggacggc aaggacattg tgcccgatcg catccgttcc gcgcttgggc ttggctgata
     6661 agtaatatgc tggcggcgca gtgcgtcgcc tctgactgaa aaggagacaa cagatgaaag
     6721 acatcgatac tgaaacccgg aataacaccg tggcggataa tgtgacggca gttgaggata
     6781 tggctgtcga acgtggcgta aaactgaccc gaccaattga gcgtggtggc gaaaaaatca
     6841 cgtatgtgga gatcaccggg gctattgagc aggctggatc cctgcgtggt ctgtcgctgt
     6901 ctgatgtgct gaatctgaaa gcggatacca tgttcacgct gttgcctcgc gtgacctcgc
     6961 cacgactgga tgaagtgatg attaaaaaaa tgtcgtcacg cgattttatt cagttgtgcg
     7021 ctgtggctgt aaattttatg agcgagccag actctggcgc gaagagcgtg caggagacgg
     7081 cagcgtaatc accctggtgt gctttgagca catcgaagat ctggtggcgg atattgccgc
     7141 catttttaac tggtcgcccg ccgaaatctt catgatgacg cccggcgaag tggttagctg
     7201 acgtgagcgg gcggcacttc gtagcgggaa tgcagacaat gaagactctt gatatccggg
     7261 tcgctttcag cgccgttgac aggctgaccc ggcctgccga aaacgcccgc cgcctgatgg
     7321 ggcagtttgg tgactccatc cagcgaacgc agggggcgat caaaaatctc gagcgtcagg
     7381 cgcgatcatt tgagcgcgcc cgtgacgctg tcagtaaagc ggatgctggc atcgtgaaag
     7441 cacgacgcca gcttaacgcc cttaatcagt tacaacgcac gggtacagtg ctcagcgaaa
     7501 aacaacaaaa gctgatgcag cagttaagca cccggcttga acgcctgaat gaatcgcgca
     7561 cacgggaaat tcagaaaatg cgggagcttg gcggagagct gaaacgccac ggcatttccc
     7621 tgacaggcag cgataacacc atccagcagg ccatcagacg caccgaacag tacaacaacc
     7681 agcttgaacg cgaacggcag gcgcttgcgc gtgtaacacg ggcgcgtgag cggtattcgc
     7741 gcgcgcagga aacagcggga aaactgaaaa caggtggtgc gctggcaatt ggtgcggcag
     7801 cggcgggcgg ctatgctgcc gggcgttttt tgcagcctgc gatcgggttc ggcaaagaga
     7861 tgtcccgcgt tcaggcactg acgcgaatcg accagaacag cccgcagttt aaggcgctgc
     7921 gtgagcaggc gttaaaactt ggctctgaaa cgcagttcac cgcaggcgat gccgccagtg
     7981 gacaggcatt tcttgcaatg gctggcttta caccacaggc cattcaggct gcgctccctg
     8041 gcgtactgag catggcaacg gctggcggta tggacctcgg tgagacggcg gatattggct
     8101 caaatattct gacgcagttc ggtctttctg ctgaccagat ggaccgggtc ggcgacacac
     8161 tcaccgcagc gtttacccgt accaacactg accttcgcgc actgggtgaa accatgaaat
     8221 atgcaggtcc ggtggcgggt aagctgggaa tatctctgga gcaggccgca gcgatggcgg
     8281 gcgtgctggc gaatatgggt atcaggggga gtgatgctgg tacggcaatg cgtgccagcc
     8341 tggctcgtct ggcatcaccg ccaaaggcgg cagcagaggc gctgaaagag cttggcgtgt
     8401 ctgtctcgga tgccgggggc aaaatgcgcc cgatggagga tgtgctggct gacctttata
     8461 aagctacccg caaatacggg gaagttgacc gggtatcgtt ctttaaggac attgccggag
     8521 aagaggcttt cacatcattt atggccctcg ttgatgcggc aggtgacggc tccttaccca
     8581 aactgagaaa agaacttgaa ggcgcgcgcg gtgaggctga acgcacggca aaggttatgg
     8641 ccaacaacct tgacggcgat ctgaaatcac tcagcagtgc atgggaaggg ttgcgcatcc
     8701 gcattgcaga tctgattgac ggtccgctgc gttctgtcac gcagtggctc acgcgtgtgg
     8761 tatcaaaggt gacggcgctg gcgcaggccc atcccgcact gacgcgccag ctactgattg
     8821 caggcggtgc attgctggca atgactgcaa cggttggctc gttgtcgctg gctattggtg
     8881 tgcttgctgg cccgctggca aaactgcgtc ttggtttttc cctcctgacc ggatcaatga
     8941 atgctgtcag ggttctgcca gcactatggg gaatggtgac gggttccgtt tctttactgg
     9001 gaggcgctat cggggcgttg ttcagtccgg ttggtcttat cgtggctgcg cttgccggag
     9061 ctgccgttct tatctggaaa tactgggatc ccatcagggc attttttgcc ggggtgttca
     9121 gcgggattat ggaaaggctg accccgttgc gcgaaacctt tgaacggttt ggtcctgttt
     9181 ttgacgcaat cgggagtggg atcagccagg tgtttaactg gtttaaatcg ctgctgtcac
     9241 cgatggagtc cagcaaggaa actctggata aatgtaccag tgctggcgag atattcggta
     9301 acgttcttgg cggtgcgtta caacttgttc tgacacctgc aaaaatgttg ctggatacgc
     9361 tggcgtggat acttgaaaag cttggtgtgc ttccggatga agcggaaagg gcgcgcaaga
     9421 aaatcgaaga cgcacagcgt gcggccattc ttcaggacaa ggttgccttg cttcaggggg
     9481 atctggcgaa aatcaatccg ccgaagcctg tggaaaatgg caatggcacc ggaggtgata
     9541 accccaaaga caataaaccg ctcacagaca gcaataccgg tacgctgcgc agactcagca
     9601 aaattgctga taacacaggt aagctggttg aggagacgaa aaaacgcatt ggccccggcg
     9661 atattgtctt taaaaacctg ccccgagcac ttgctgttcg tggggagtgg caggagcgga
     9721 agattgcgca ggtcagtaag cctgcccccg caattaatat cacacccgtg gttccggctc
     9781 cgctgcctcc ggcgctggtc cctgttgttg cggccagctc ccgcccggtg gcggaggcta
     9841 tacgatctcc agtggcatca gttcctgtaa cttcccgtaa ccgggagcct gttgccttcg
     9901 gatttggtgg tgaaattcat gttcatctgc ataacgttgt tacgcagaat ccccgcgaac
     9961 tggcgaaact ggtcggtgaa atggtcaggg cagaaatgga acggcgcgcc cgtgccgggc
    10021 gtggctgttt ttacgataaa gattgaggag tcatggccat gatgatgatc tacggcatgt
    10081 ttgtttttga gctgcgcacg ctgccgcatc agcagttaca gcaaaacaaa agctggcggc
    10141 atgtgaaaaa tgaacgcgtt aaccgttcag caagctggca gtatatcggt gcaggtgatg
    10201 atcgcatcgt tctttctggt gtgctttatc ctgaaattac aggtggcgaa gtgtcgctgt
    10261 cgctgctgac tacgcaggcg tatacaggac gaccctggcc tttgattgat ggcgtcgggc
    10321 agatttacgg catgtatgtc ctgactgaaa cgaatacgac ccgctccgag tttgatcgct
    10381 acggtaaggc gaaaaagata gaattttcac tgactcttga acgctgtgat gaggatttgc
    10441 gggagcgcct gcaatcctca tcgttcagtg atatgctgtc cggcttcaaa gataaggtga
    10501 catcatctct taacagcgcg gccagttcag ttaaagggct gttctgattt aacacaaaaa
    10561 ccgctaatgg tcagattagc ggttttcatt ttcctgagtc tgcccggttg tttcttcagt
    10621 ctgtatatcg cctacagggt gataacgata aatcgtcgat gtgccaatgc cgtaaattat
    10681 tgccagttgt tttctgtcgt gcccgttttt gattagcctt gctatttgct catgctgttc
    10741 ttttgtcagc ttcggtcgac gtccgcctgt gcgccccctt gcgcgcgctg ccgccagccc
    10801 ggccagtgta cgttcaacaa ttaattcacg ttccatttca gccagggcac ccatcacgtg
    10861 gaagaaaaaa cgccccattg gagaagatgt gtctatgctg tcggtcagac tgcgaaaatt
    10921 aatccctcgc tcccgtagtt ccccgacgag agaaatcaga tgtttcatgc ttcgcccgag
    10981 gcgatccagt ttccagacaa ccagcgtgtc accttttgaa ggcgctttaa agcgcgtttt
    11041 aatcccggtc ggtctgtctt tgtcccgctt aatttatctt caaatatttg ttcacatcct
    11101 gcacaaacaa gagcgtttcg ttgcaggtct gtattctggt catttgttga tacccttaca
    11161 tagccaatca gcacactgaa tctcccgtcc aaaagcgcaa atcatgccat gcaggccaga
    11221 aacggccatt atttaaaacc tcggtttacg agaactcggc acaagcgggg agaaaatacc
    11281 gttactcagt acagcgaata cctggaccaa tcgacaaaca ttcagcggtg gcctttctgg
    11341 ggaactgtcc ggcaatgccg ctactgcaac aaagctgaaa acagcacgaa aaattgctgg
    11401 agttggtttt gatggttcta gcgatatttc aattagtgcc aaaaatgtca atgcatttgc
    11461 actccgacaa acaggtaata ctgttaatgg tgatacatcc gttggatgga attgggatag
    11521 tggtgcatat aacgccctga ttggtggtgc atctgcatta attcttcact ttaatataaa
    11581 tgctggtagc tgtcctgccg tacaattccg tgtgaattat aaaaatggtg gcatttccta
    11641 caggtcggct cgtgatggtt atggggttga attaggttgg tcagatttct ataccacgac
    11701 acgaaaacct tcagcgggag atgttggtgc atatacgcgg gcagaatgta actcaaggtt
    11761 tattacaggt attcgccttg gcggtctgtc atctgttcag acatggaatg gtcccggctg
    11821 gtctgacagg tcaggttatg tcgttacggg ttcagttaac ggaaaccgtg atgaattaat
    11881 tgatacaaca caggcaaggc caattcagta ttgcattaat gggacgtggt ataacgcggg
    11941 gagtatttaa cgatgatgca cttaaaaaac attactgctg gcaaccctaa aacaaaagag
    12001 caataccagc taacaaagca atttaacatc aaatggcttt attcagatga tgggaaaaac
    12061 tggtatgagg aacaaaagaa tttccagcca gacactttga aaatggtcta ttaccataac
    12121 ggcgttatta tttgtattga aaaggatgtt tcagcaatta atccggaagg cgcaagcgtc
    12181 gttgaattac ctgatattac agcaaatcgc cgggctgata tttcggggaa atggttgttc
    12241 aaagatggcg tagtgataaa gcgaacttat accgaggaag agcagaggca acaagcggaa
    12301 aatgaaaagc aaagcctgtt gcaacttgtc agggataaaa cccagctatg ggactcacag
    12361 ctacggctgg gcatcatttc cgacgagaat aaacaaaaat taaccgagtg gatgctctat
    12421 gcgcagaaag tcgaatctac agacacctcc agcctgccag taacgtttcc cgaacaacca
    12481 gaatgagaga aggcccgata ttgggcctta atttttactc aggcttttgt ggccattcgg
    12541 gatttgctgt atccacacgg ctgaccagaa cgctgtagcg ttcccatgac tccagtcgtg
    12601 tgcgttcctc atccatcgcc atattcagcc tgacagcgcg ttccagtggc tgaataacgc
    12661 tttcagcttc agaaagcaac gcgacctttt gtgattcggc ctgttgttgc tgttcgtctg
    12721 ctgtataaat ccgcttaacc acagttccgt ccttaaacat ccacttccct gaatcatcgg
    12781 cacgacgatt ggctgttata tctggaatct caacgacact aaagccttcg ggattaagcg
    12841 ttggggcatc tttggttatg gcaacaataa tattattttc gtcgtataca atctttatgg
    12901 tgtcgtcctg aaagttattt acttcctcat accagttttt accgtcttcg gaccataacc
    12961 agataacatc aaaattcttt gttagctgat attgttcttt tgtttttgga tttccggact
    13021 taatattttt taatatgctg cataatttac acctgtgcga cgttatacca tgtgccattg
    13081 atgtattttt gtattggtct gaagatggct tcatcatcgc catctacttc accaatgatt
    13141 cttaatccgg taattgcgtg tccggctttt tcataacgac caccacgcgc catcaattga
    13201 acaacacgcg tacccaggcg aacatctttt acatagcgtg aatcaaaatt cccccagttg
    13261 ctgggctgta tctgaccgtt aacagaaaat attaccgagt tatctgtatt tcgctggcta
    13321 tagaaatgcc atcctgcctc attgcctaac tctgcaacta ctggacgggt tgaagcaccc
    13381 cataaattaa acgttgcatt ctttgtggag ttgttggagc tggatagcgt gaatttttta
    13441 ccatccccgg cctgaatatt tttaaaagca atagccactc cattctgaaa gcggaataca
    13501 cgctgactat tagcataaac atccagaata ccgtctccat tctgtttaaa tccggtgtca
    13561 ttatcaccaa gaacaataga gctaccacct aacgcattcg tcgaaccaac tccaagactg
    13621 ccattaatga cagcattaac aagaatattt agtgcatccc atttcagcgt catcaggtct
    13681 tttgttgtgg tgctctggcg gcttctccat ttgaaatatt cattgccgtt gtcgcctgtt
    13741 tcaaaccaca tgtatgaatc agtgtcacca tcggcatcat ttttaaatcc aatcttcgcc
    13801 cagtcagtat ttcgaatcca ggcaaggatt gagtcatttt caaaagtaag cccaccggac
    13861 aaggtatcgc catttttttg cacggcgtta ccagccctgt ttaccgtttc ctgtaaaccg
    13921 aggtattcga taacggcagc aacggtcgat ttcgcaagaa tatcccgccc gacttttgtc
    13981 agggttgcca ggctggcgac atcattcccc gtaaaatacg gaaacctgtc tgccgcagta
    14041 gcaagcccgg ccagcgccgt cagggtggca tctttcggtt gcttacccgc aagcgcgtta
    14101 gtcatggtgg tcgcaaaatt cggggcgttt cccagcgccg ccgctaactc gttcagcgta
    14161 ttcagtgcgt caggtgacga atctacaagg gcggcaatcg cagccataac gaaagccgtg
    14221 cttgcgattt gggtattatt cgttccctgt cgcgcagctg gcgttgttgg cgttccggtc
    14281 agcgcaggac tgtttaaggg cgctttcttg ttcgtttcat ccattaccgc cttaaccgct
    14341 ttcgatgtcg cggccagtgt ttcagacgtg ctgttggtgg cactactgag ctggactatc
    14401 cctttttgtg ccgtcgtggc gtcctgagcg gtatattttg cgttagcaag gtcatacgcg
    14461 gcctttactg ctttcggcgt tgcagcctgc gtttcagacg tgctgttggt ggcgctactg
    14521 agctggacaa ggccttttcg cgtcgtgctg gcatcctgcg cagtatattt accgttagca
    14581 agatcatacg cggcctttac tgctttcggc gttgcagcct gcgtttcaga cacgctgtta
    14641 gtggcgctac tgagttgaac aaagcctttt gcggtcagcg aggcgtccgg gtgacgtcgt
    14701 gactgttcat gctctttcag tttgtcatcc acgtaatcca ctgtggccat caccatggtg
    14761 ttgtccacgg taagcgccac ggtggcagtg ctggatacgg tcagaatggt gcgaaatgtt
    14821 tgtgcacgac cggacccttc ggcaacggct ggcttgtaac tttcggcagt atttcccacc
    14881 gcgattaaat cgccgtgctc atcaaataca ccaatttccc ggatccagaa tccgcccgtt
    14941 tcaggaggaa taaccagctc cgcaataatg cggttctgat gtgttgcgtc caggatgacg
    15001 cgattaacag tatgtcgcca cacctcatgc accagacggg tctgcttact gtctggtgtg
    15061 ggcaacgtgc cgccaccgtc gcccacggcc atatgagtca ggcggacagg cttaccatct
    15121 ggcgcggcta cctgagctaa tttttttgca cccgtatcgg tgataatggt tttaaatttt
    15181 cgtgttgtgg tactcatgct taatcgcctg gataaatggt aataacttca ccgtcataag
    15241 ttgccgccgc tgcgaaaata tcccccggaa tttcctgaat gatattcagc cctgtcatgt
    15301 ggcggctgac cgggcgggca tcagcaatca accgctccat ttccagatac atttcctccg
    15361 tcacgccact gtccagcgtg ccgacttcaa cggtaaatgt tcccggttct ccgccgaact
    15421 cccaccactc agacacgcga atgaggtatc ccagcggctc aatggcccgg cgcagtgcgc
    15481 tgatggtccc tttgtgtcgg tgtatcagcc atgcatcacg aataacctgt cgctttgtct
    15541 cttccggcca gttgcgatcc cagcggtcaa cggaaaacgc ccaggcgaga taaggcagca
    15601 gatgcaccgg gcaggtgtcc ggcgaccaca gcgtgttgag gtctaccgga atgtctgtaa
    15661 tgcgtgttcc gacggcttcg gcacaacgca tgaaattgct ggctgatggt ggtaacaacg
    15721 aattactcat tgcgtccacc ttcgctgatg gtgaatgacg cacagcgcgc cgcctgtatg
    15781 tcgctgatgg ccatattctg tgtgggttcg attatctcca cgcgttgcac accgtgcaca
    15841 tgcagtgcgg cagcaatggc ggacaacgcc acgtcctgac cgataagccc ctgctcagcc
    15901 agccacttcc tgaacgacga ttcagccgcg gccagaatag gttcggattc cgggccgggg
    15961 taaaagtaca gttttgcatt cagccgccat gtcacgattc tggcactctg tacggtcagg
    16021 cggtcggcca ccgggcgggt atcctctgca ttcagaacgg cgcgaacggt attaagcaac
    16081 gcctccgttg ctgtgccgtc gccctcagtg gacaggatgg aaaccgtcac gttggccgga
    16141 gacgggctga tggcccgcgc atcgcgtacc agaccgctgg cgctgcgtgc aaaatactcg
    16201 tatgcacctg acgggccagc aacactcaga ccgtcatatg cccgttgcgc ccgtagtctc
    16261 agcgaggtgt cactttccat cactgcatcg gtggtatccg ttgccggagt gataaccagg
    16321 cgctttgtgt tcatattgcc cgcgaggttg tccaggtctg tcccggcgct gtggcttagc
    16381 atgcaggcgc gtgcaccctc attgacccgc tggcgtaaca gcatttcacg aaacgacatg
    16441 gtttgagcga taacgttaag gggttccgat tccagctcca gcgcggcgga aacggcttca
    16501 cgctgttcgg cgggatagga cgcaatcatc atggcctttg tgtcagccag aattgcctca
    16561 aagtcaggct ccgcgatgat ggcgggttcc ggtaactgtg aaaggtcaac ggcaggcatg
    16621 atttactccc tcagcgtgat ggttaattca acattctgca tggtctgcat gacagtgccc
    16681 gacagcgtca ccccggcgcg gcctcctgcc ttccagacaa cgtcgatagc gtccagggca
    16741 atgcggggtt cccatcgtgt cagcgcaatc acggcagcac tcatgcattg cagacgcgtg
    16801 gtgttattca tgggttcgtc aatcaaatca ggcacaaggc tgccatattc ccgtcgcata
    16861 acccggcttg ccagcggggt ggtcaggatg tccctgactg actgtttcag gtgctccata
    16921 tcgttcaggt ttcccgttcc gtccgggttc attcctgtgt agcgggttgt cactgcgggc
    16981 ctcctgtcga atcgctgcca cctttaacgc caccgtgttt atgcgtatgc actgtgatgc
    17041 cgtttgaggt gaaattaccg ccgctgtgcg tgatattgcc gctcatcttt cccccttttg
    17101 tgacgtcaag cgtcgccgtt ctcagaaggt ctgtgcattc cacgacgggc gtatccagtg
    17161 tcacgctgac ggatgcctgc agggtggctg ttttcatgcc gctggcgctc agtgcgcctg
    17221 cgtccgcgtc gtagcggaac accgcgccat ccggcgcgct gaccacgatt tctttcaggc
    17281 ttttgccggg ggccggaatg gcatcactcc acaggctgcc aattatcatg gcggtttccg
    17341 ggttgccgcc aatgcaggca attaccacct gttcgcctgg tgatggcggc agccacacat
    17401 tgaaggctcc cgcgcgagag gtgttccagc gcagccaacc tgtttccagt tcgccgctgc
    17461 gaacgcgcac gcgccaggac ttctcatcaa cttcagagat gatcccggtg cggatgatat
    17521 tgctcagtag ccgcatgagt tctgcgctca ccgtacagcc tccgcaatcc ggcccagcac
    17581 cgtgttataa atcaggcgct catctgcctg gctgataccc agcagctcac gtaccgggta
    17641 atcggtgaaa atgcccggcg caacctgatc gcgctcaccg aactgatgaa cgcgtgcaat
    17701 acgtgcggcc acgccgctgt aacccaccgt cacaccggaa gcatctgcac gggctttcag
    17761 gtagcgggcg gtgcgcagtt ttacgaacat ggggacgcgc tttgtgctgt cctggttgat
    17821 gcgccgggtg cgtatttcca gaaagcggtc gatgtcatcc cggtaaaacg tgcggatgct
    17881 gtttttatcc tcatcccacc cggtgatggt tcgcccgtat ttccccgtgt cgtgatgcca
    17941 gtttttcagc gtgcgtgctt cgttattcca gataaagcga atgcgctcct gtatccgggt
    18001 tacgtggcgt ctgcgtggtg tccatgcggt cccgtccggc gctttctgtg gccggatacg
    18061 tgcctgctgg gcgcggcgta aatcctgtgc cagctttctg gcgatgttat tgatggcctg
    18121 ctgattcagg ctgtcgcgga tggcctcaaa ggtttcatcc acgcgagtga atgccttatc
    18181 catcgctttc accccacgtc acatcctgga atacatgcga ccagtcgcct tcggaagatg
    18241 gcaggcgggg ttttggctcc agcaggtgtt ctgcctgcgg tgtgccctga ctgctgcgcg
    18301 tgatgcgaac gcgttcccgc agggggagcg taaacaggag atcggcgctg tcatcgtcat
    18361 tgataacggc ggaaaatttg atgtcctgat tacgctcagg gttgagcaac aactgtggct
    18421 gattttcgga taaccacgcc agcagcggca gcgtgaggtc gtccagctcc ccggcgtaat
    18481 ccatgacaaa catcaccatc tgatagcggt aaacaaacga tggggtttct ccggtcgttt
    18541 caatgttgcc gctctccacg aaaatggtga atttttccgg gttagcctga caccatcggc
    18601 atgaacgggt catggcttca cgcagggaat cagttttcag catggttgtt atcctcgttg
    18661 ttcagtcgtt gcagcctgcg ctgttccagt aattcaatgg cccgtttatc cgcgttacag
    18721 gtttccagtg catccagaag gcggtcgccc catataccga gatttcccca tgtgggagtg
    18781 tcagggaagg ggggaggcgt taccggtatg gtcagcgtct gcggtataag ccggactgac
    18841 ggcgctggca gtggcgcgtt ctgcgtgcct gcgcagcctg tcagtaaaac gagcgtcagg
    18901 caaagcgtgg gcgcattcat cttttgcaat atcgttgcgt agctgttcac gtcttacctc
    18961 tccgtcctga ttgcgttgct gattttccac gcggagttgc gccagcacct gctgcatatc
    19021 ctgtaccccg gcgctgatga tattcagggt gtcggcggta cttttcaggg tgctggcctg
    19081 cgcttcgttt ctggcgttct cccggcccag cgaccacgac agacgcatgg atgttcccca
    19141 tccggcagtc agaaggaaag cgacgccaag cgtgggccag agcttcatgc cggataggct
    19201 ccgtgtggta actgaaaatg cggtccgtct ttcagggtct tccagtcgcc gccccattcc
    19261 accggaatat tcagttcccg gctggcctgt ctgaatgctg ctgcgatttt ttcgtacagc
    19321 ggccattccc atgacatctg gctgccgata taagccacaa catccacggc atgccccgta
    19381 aggtggcggc tgttcatggt ctggctctta cccgtggcca ccagttgctt ctggcggtaa
    19441 cggctgcgca acccttcggt gataccaaaa tccacttccg agatttccag tgcccgtcgg
    19501 gtcactttca ccagatcagg atttacaccc tgcaaattct tttcgctccg gctgctgaat
    19561 ttaaatgtgt tgctcattcg tccttctcct tcaccctgcg attaaaggcc gcaataacct
    19621 tgtcgcgtgc tttctctgca cccataaaac cgattgatgc gccgataaac gtcacggcat
    19681 cttcaggaaa cccgaagaag cgcaacgacc cggccacggc catggcaaga acgccgcacg
    19741 ccagcgatcc cgttacggtc tgaaccagtg ttcgtccgtc ataaaggctc atcagcgcgg
    19801 aaatgctgac cgccgcgcct actgcataca ccgttggcag gtggtcaaag agccacgcaa
    19861 taacctgctc tgtgatccct gtttgaatgg tgctcactgc tactcccccc acaactgaat
    19921 catttctcgt ttcttcttct ccggctccgg catctccact tcctgcccgg cgtccagaaa
    19981 tacctgctga cagagtccgg ggttggcatc cagcaccttt tcggtgacgc cctgcgtcgt
    20041 gccgtagtac cggaaacaga gcgaatccac ggtgtcgcct tccagtgcct tcactttcat
    20101 cagcacaact ccgcaaagat tcgcgggcgg cacagaatgt cagagatggc ccagctcaca
    20161 tcacgccaca aatccgatgt ctgtatatcc agagcgtctg cccggcggtc gcccttgtcc
    20221 gtagtgtctg catcacgata acgctccaga atcagggcgc gcgtggcggt ataaacagca
    20281 ttgcgccagt gccagagatt gacgctttct ccgttaatta cgggtgccgg aacatcggcc
    20341 agcgtctgat ggccagctgc ctgctgttcc tgctgccatg cttccagctc gcgggtaacg
    20401 tgtgccacag ccccggtggc agtatgcagc aggcgggagg tggtcacgcg ccccggcagt
    20461 cgtaccgcca gacgcagctc gcgcagcaca atatccggcc agaatgcacc cgctgaaatg
    20521 cgggtatcgc catcatcggt atcggtgatg tcgtcctctg cgggtccggg ttcagttctg
    20581 gcaactatag tcatggggtt cactcctgaa aaaaaatcgg gcggtgggtg cgcggtgtaa
    20641 acggtcacgg agtcaaactg gaacaccgcg cacgccgccc gctgacgggg tcagtcgtta
    20701 accgcgcttc gccttctgcg tcgcggtggt ttttcgtgtt gcaggcttcc gcgttgtctt
    20761 tttacttttg ctgctttttg ctgctttcgt cctgcgcctg ctgtgcgctg gcgtcttctg
    20821 gttcggctgc ggaatcggct tttttcaggg cgcgggaaag ggttgcaatc tcgcgtttca
    20881 cacctgcgtt cgggttcagg tgcattgctt cgcgcagcag cttcagtgac agggccatgc
    20941 tgtccgcatc actcaggcca cggcgggcaa aggcgcacgc tttgcataat ttggcgcgca
    21001 cttcgtccgg catgtcctgg tcggtgacaa tctcccggag ggtgtccagt ggttcgataa
    21061 aggcggacaa atccgcgtcg gcatccgtcc cggcctgcgt cagtaccgga ttacagattt
    21121 cttcggtcag taccgtggca gcagtacggc caaagttatc cggcatgatg aggttgtgac
    21181 ggactacata cgcgccgata cgcagcgcaa gcggaagatc gccacagtca atcgcccaca
    21241 ccatcagcgt ggcaatcact tcatcctgct gcccgccgtc agcctccagc gttccctcaa
    21301 tccagccgga aaaatccggc aacaactctt ttttgatggc ggctttcgcg cttctggcct
    21361 gtacgccctt aagccgggcc tgtgccagac gcagacgata cagcacctct tcatgcgcgg
    21421 tacgcgcggc gtggtccacg ccttcattcg cccggcctgc gcgctgtgcc atcacgttct
    21481 gccagtgttg ttgtgcagga gtaatcattt ttgctctccg ttacaggcgg gcatgatgcc
    21541 cgccgtgagt tgattagctg tcggcgaact tcaggccagt aaccatcgcg cacttgccat
    21601 agtcttcaac gacataagcg tcattgatgg actggtaggt ggcgatgcgg ttgtattccg
    21661 gctcgtcttt catcaggcga cgcattgaac ctttctgcca gtaaatcgac aggttgttga
    21721 acgaggtgat cagcatcgtt gcatccggga agaacggcgc aaggaacacg cccagcccgc
    21781 caatggtgcg cgatgacagg atgagctgcc cggcgagtaa ttccgcattg ggattctggc
    21841 cgctgatgct gttcagcacg ggcagacgca gcgagttaaa caggttgcgc cccataatca
    21901 ccacgaggtc gtcagcttcc ttgtgccatt catctagcag ggatgaacgc gcgtcctgta
    21961 ccagtgcatc agcgttcgca tacttacccg cgtgcgccac ggtgttgtcc atgttgcggg
    22021 aggtcagcgt cacgtcattc ataacgcgtt cgctggcgtc ggttctgatg tgctccagcc
    22081 agcccacgtt aacgtcctga agcagcttgt tggtgctgaa gttggactca tccgcgtgag
    22141 acgtgccgtt gaaaccgatc atgatgcggt caagcgccac ctgtcgggca atctgtgcgc
    22201 tgatgcggga ctgaaaatca gggtgtgccg accaggcatc aagctgcgga tacgaaataa
    22261 acgtgtcgta gttcacctgt tcacactgat atttgcggtt tttcagatca accacgttat
    22321 tcgggttacg gcgttttgtg ccgtcataac tggtattcgt gcgcgcaatc ggtcctgtgg
    22381 tatccaggag gattttttcg cctttctggt cggtcacgcc gatcacgtta tttttttcgt
    22441 aaattcggta ctttcctttg aggcgttttc aaaacgctgc tgcaccgcgg gttccacggt
    22501 aaatcgcgac accagtgcag ataccgggat attattaagc gacacctgct gcgccatata
    22561 gcaacccagc ttgttgcggg taatatctga catcaccaga ttcataaaaa atttgctcct
    22621 ttgtctaatc agaagtcggc cagctggtcg gaggctgcgc ccgttgcggt gaagcggttc
    22681 tgcggatcgc cgtcctgcgt gcgcagtttt tccttcagtg ctgccagctc tgtggtcagt
    22741 gacgtaattt tctggcggtc ctgctgatgg cgggtttcca gcacattaaa acggtcgata
    22801 atgtcggcct gtgacgttgc gacgccttcc accgcttcct gaatacggga aaaactggcg
    22861 tcatccgctt tgcggccacg gccaataatc cccattacgc ggttaaacca ctgggtgcct
    22921 tcttcctggc gttgttctgc catttcgatg atttcagact cgatggcttc ggagataagc
    22981 ggcgcttcac cctggatact gttaaacgtc atcaccgcct aacgttgctg tgccgtgaat
    23041 ttcaggcgct cagtgcccag gcttgccggg gtgtcggtca tcgccagccc gaccagatag
    23101 gcgcgcccgt taacggagaa ctgcgggtgc agttcgatac tggaatagat tttcttgccg
    23161 tccgcaacaa gctgcttcat gcgctcggtc ggttcgattt ctgcatacag cgcagtacgt
    23221 ccggccagcg gaccttccgt aatgtcttcc gtactcagtg cggtgacatc gcccattgcg
    23281 gaaaattcgc ttgacgggca tggcgagaga tagtgctcaa cgttcacgcg ggcagcgtaa
    23341 acatccgggt tgaagttctc ggcggcttca cgcagatgca ccggactgat ttcacggcca
    23401 tcaacagttg atccggagac agccacgcga aactttttgc gggatgtctt tttttcatta
    23461 gccatagttt ttgcccctct gactggttct tcagtcatga tggcaaagcg taacaggctg
    23521 atacaaaggg cttttgttgt aagaaaacgg ccagaacaga gggttaagga gaacagtttc
    23581 gcgcgcgggt aatcttcctg taattactca gggggagcaa tgattcagga cgcttttgtg
    23641 cgccagcgtg cgcggcaact ttactggcag ggttatccgc ccgcagaaat atcacgtctg
    23701 atgggaataa acccgaacac gatttatgcg tggaaaaaac gtgaccagtg ggatgaaacg
    23761 ccacccgggc agcgtgtcac gcagtccatc gatgcgcgcc tcatccagct tactgaaaaa
    23821 cagaataaaa caggcggtga ctttaaggaa atagacctgc tgacccggca gcttaaaaag
    23881 ctgcatgatg gccagccgga tgtgatggcc gcaggaaaga aaggccgggc gaaaaaactc
    23941 aaaaatcatt tcacgccgga acagattgcc gcactgcggg aaaaaatcat cagcaggctg
    24001 gagtggcatc agcggggctg gtttgactcc ctgacccttt gcagggaagc cgggatacgt
    24061 aacaggatga tcctgaaatc ccgacagatt ggggcgacct ggtattttgc acaggaagca
    24121 ctgctgatgg cgctgcgtga cgatgtggcg caaccttacc agcgtaacca gatttttttg
    24181 tctgcgtcgc gtcgtcaggc gttccagttt aaaagcatta ttcagaaggc cgcggctgaa
    24241 gttgatgtgg agctgaaagg gggcgataaa atcatcctct ccaacggcgc agagctgcat
    24301 tttctcggca cttctgctgc gtcggcacag tcctatacgg gcaattttta ttttgatgaa
    24361 tttttctggg tcagtcgctt tgctgaactg cgcaaggtgg ctggcgctat ggcaaccctc
    24421 agcggactgc ggcgcaccta cttctccacg ccatccaccg aaacgcacga ggcatacgcc
    24481 tactggaacg gcgaccgctg gaacgagaaa aaggcctcgc ataaacgcca gcgtttttct
    24541 gtggactgga aaacgctgca taacgggctt atctgccctg accggacgtg gcggcaaatt
    24601 gtcacgctgg aagatgtggt taatcacggc tggaaacaca ccgatatcga cgaaattcgt
    24661 gatgaaaaca ccgaagacga gttcctcaat ctctatatgt gtgagtttgt ccgcgaaggg
    24721 gaatcggcat ttaacctgaa tatcctgatt ggctgcggcg ttgacggata cgacgactgg
    24781 aaagactgga aaccttttgc tccccgcccg atggggaatc gtccggtatg gattgggtat
    24841 gacgcaaacg gcagcagtgg caacggcgac agcggcgctg tgtccgtggt ggttcctccg
    24901 tctgttcctg gtggccgttt tcgaacggtg gagacgcgac gcgttcaggg gctggagttt
    24961 gaagaacagg ccagagtcat tgaagagttc acgtgtcgct acaacgtgga acacatcggc
    25021 attgatgtga cgggcgggaa cggggaggct gtttatcaga tagtgaaacg gtttttccct
    25081 gccgctattc cgtacacctt cacgctgtca tcaaaacggt cgctggtact gaaaatgctg
    25141 caaataatgc gtgccgggcg gtgggaatac gatcgcgccg aacgcgagct ggtcgcggcc
    25201 tttaacgccg tgcgtaaggt gaaaacaccg ggcggcttta tcacttacga aacggaccga
    25261 gcgaggggga tcagccacgg cgaccttgcg tgggcaacca tgcttgctgt cattaacgaa
    25321 ccgattggcg gcgaaggaga aaacgagcgt ttcacggtta tggagttctg atgagcagaa
    25381 aaaataaaaa agtgcgcatg agttcacgca ttgatctcgc tgatgcgctc aggaaagaat
    25441 catcgctcag tgcattcaca tttgatggtc cttatcgcct gacctgctgg acaatatgta
    25501 ctgtgctgat aacgggcggt ggtatgaaac cccggtggac tggtacggtc tggcaagagc
    25561 tgcccggcaa acgtcctggc atcagtctgc gctttatttt aagcgcaatg tattgctcgg
    25621 ttgctacatc ccgcacccgc tgctttcccg gcaggatttc tcggcgctgg cgctggactg
    25681 gtttgtgttc ggtaacgcat tccttgagct tcgaagcaat atgctcggcg aaccgcttaa
    25741 attacggcac gccctggcga aatacatgcg acgcggaagc gatcttgaat catggaggta
    25801 tgtgcaggat ggcaaggatg cgtttcagtt tcgcccaggc aaagtgtgtc acctgatgaa
    25861 tcctgacatt aaccaggaaa tctacggcat gccggaatat ctcggcgcat tactctcggc
    25921 cagcctgtct cattcggcgg acatgttcag aaaactgtat tacgacaacg gatcccacgc
    25981 cgggtgcatc atctacatcg gtgccgcgca ggtaaaccgc gaaagcatgg actccctgaa
    26041 agaaacgcta cagggtgcgc gtggtggtgg tgcgtttaaa aacgtgctca ttcatgcgcc
    26101 caacgggggc aaagaggggg tgcaaatttt gccgttccag cagatcaccg caaaggatga
    26161 gttcatgaat gttaaggcgg catcccgtga tgatgtgctg gctgcgcacc gcgttccgcc
    26221 gcaactgatg ggggcgatgc cgggtgaaaa aagtgcgttt ggtgatgtgg agaaggccgc
    26281 gcgggtttac gcaattaacg agctgatgcc cgtcatggag gccatgaagc acatcaatga
    26341 ctggcttggc gaagaggtga tccgctttaa cccttacgca ctgttagaca tccagcccac
    26401 atcctgacgc gcttcgcttg tctgctgctt cgccggggca taaaaaattt atgccccgac
    26461 tctccagctc ctgtatcagt cagataattt cacgacgcct tccagtttat cgccaccatc
    26521 gacggtcaga ctcttacgca atcccaccgc gttgactgca tgttctcgcc gcctcagtgc
    26581 gattttgacg gccttacctt tcaccccatc aaatcagaat ccctcacgta tttttcacgc
    26641 tcagcgtgag aaatacggcc attctgtcgt gtcgctgcga catcgttaag ggaacgctat
    26701 ttaccccctg aaacgcgggc tgttcccccg tcacctgcgc gcagaaaaag cgcgtttttt
    26761 tgtgcacgca cggatccttg acggatccag ccgccacgcg ggctggaagg gcaaaaattc
    26821 gttcaaaaaa attgtgcaaa tgtgcagcag ggcgatgtgc gattatcgcc ctggtttgag
    26881 ggggatcagg tgttattttt atctgtcgtc agtgggctaa accatccaca atttacatcg
    26941 catgactgat gcgttctgtc ctcgtgtttc tcctgccaca atgcttttcc gccagccttt
    27001 atgatggctc tttcaacatc ccgctcgtat cgcaagggct gaaatacgtc attaatgaaa
    27061 tattcgctta tgtccggaag cgatactgca aaattatttg tttgttgcgc cgtcctgcta
    27121 tgcagcaaag cggcatgctt taatgcgtcc tgtgctttct ggaatttaag tgcatagtca
    27181 gtggcgattt tttccagttc agcgattcgg ttgtctttgg tttccagcca atcaagtagc
    27241 gccaatactt caggatcccc gacatccaac actgttacgc gtgatttttc ataatgtttg
    27301 tcagcaagag ttcggccaat tttgaaatct ccatcatcac cataaccgga gcaggcataa
    27361 acaacctgtg ctccagatat tcgctgaatt gacatttcct cgccgcaaat agggcatttc
    27421 ggtactggca caggtgaata acgttcacgt aatgcctgat agttgatttc gctcattaag
    27481 tcgttctcct tgtttatgtt ctgaggtgga gagcagggcg aactcgccct gatgttgtgt
    27541 tattcaggaa ataacgcccg gatatttccg gccatctgac tggttatctg tgcggttgat
    27601 actggctgtg atgcggggcg ttctgtcctg gtttgtgtca ctgataacgc ttcatcacca
    27661 gcccatgcag ccagtcgata agcctctgcc ggattcattt tcagaagtgc cagcccggcc
    27721 agaaaagcca cgcgttggcc gcttttgcgg gcttctggtg taaggctgtc cagccaggcg
    27781 catgcttctc cttcgttctt gacggcggtg ggcttcagat agaaacttat ccgtctggtt
    27841 ggagtcgtca ttggtttact ccttgtccat tgcgtacagc ccattaacca gagcaaactg
    27901 tggcaccccg tccgcgatga aagtcgcatt aactccgcag gcttcgcgga tagcgggtgc
    27961 cacaatctcc gcccctccac cgacaaccat cacccgcccg taacccgaaa aaaccgccag
    28021 cgcgcggatc acgcgttgtt tcagtgtttc ttccttttca cgaattaccg ccatcaggct
    28081 ggcgtaatgc gcgtcattgt ggatgtgctg gcgcagccag gcttcatcat ggcgatgttc
    28141 gataatggta ttggcgatgt ggtgactggt gcgcataccg ttagtggcca tcaccgacag
    28201 tacggcatcg gccatcagag aaacgcccac gtgtggatcg caaaacacct ggctgatacc
    28261 tgccagttgc ccctgaacct ttgccacatc cagcgtggtt ccgcccaaat ccacaatcag
    28321 cagggattca aacggactca tgtcagccag tgccttaaag ccagccggaa tggattcagg
    28381 cataacctgt acgttacgga tagtgaatgc ttcgccgttc tggtactcca ccgggcgcat
    28441 gacgttcgct tttttg
//
LOCUS       DADKRT010000031        28223 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.031, whole genome shotgun sequence.
ACCESSION   DADKRT010000031 DADKRT010000000
VERSION     DADKRT010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 28223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28223
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.031"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..777)
                     /locus_tag="JQ356_001173"
                     /pseudo
     CDS             complement(1..777)
                     /locus_tag="JQ356_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(955..1866)
                     /gene="gsiD"
                     /locus_tag="JQ356_001174"
     CDS             complement(955..1866)
                     /gene="gsiD"
                     /locus_tag="JQ356_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001236035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HAY4621332.1"
                     /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
                     LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
                     LAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(1869..2789)
                     /gene="gsiC"
                     /locus_tag="JQ356_001175"
     CDS             complement(1869..2789)
                     /gene="gsiC"
                     /locus_tag="JQ356_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
                     /protein_id="HAY4621333.1"
                     /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD
                     AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT
                     ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG
                     WLPTVGADSWQHYILSSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV
                     VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA
                     EILLFSLEFILINLVVDVLYAAINPAIRYK"
     gene            complement(2807..4345)
                     /gene="gsiB"
                     /locus_tag="JQ356_001176"
     CDS             complement(2807..4345)
                     /gene="gsiB"
                     /locus_tag="JQ356_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
                     /protein_id="HAY4621334.1"
                     /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY
                     DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT
                     DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILVH
                     PATAMISPAALEKYGKEIGFHPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI
                     TWRPVADNNTRAAMLQTGEAQFAFPIPYEQAALLEKNKNIELMASPSIMQRYISMNVT
                     QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA
                     RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV
                     EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ
                     ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED
                     ADLQ"
     gene            complement(4365..6236)
                     /gene="gsiA"
                     /locus_tag="JQ356_001177"
     CDS             complement(4365..6236)
                     /gene="gsiA"
                     /locus_tag="JQ356_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter ATP-binding protein
                     GsiA"
                     /protein_id="HAY4621335.1"
                     /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET
                     LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVR
                     GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT
                     ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM
                     SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG
                     AMKGLDYPRRFPLISLEHPAKQEPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT
                     REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS
                     PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLCVHGLLPGKDAAARVAWLLERV
                     GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD
                     LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA
                     VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
     gene            complement(6223..7188)
                     /gene="iaaA"
                     /locus_tag="JQ356_001178"
     CDS             complement(6223..7188)
                     /gene="iaaA"
                     /locus_tag="JQ356_001178"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY4621336.1"
                     /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE
                     AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH
                     LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPAIFSTPLRYEQLLAARKEG
                     ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC
                     YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG
                     LIAIGHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ"
     gene            7392..8627
                     /gene="moeA"
                     /locus_tag="JQ356_001179"
     CDS             7392..8627
                     /gene="moeA"
                     /locus_tag="JQ356_001179"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HAY4621337.1"
                     /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV
                     VSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
                     PVPEGCEAVVMQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE
                     LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
                     EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
                     TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
                     VDVGEWVEVEPFNALFGGL"
     gene            8627..9376
                     /gene="moeB"
                     /locus_tag="JQ356_001180"
     CDS             8627..9376
                     /gene="moeB"
                     /locus_tag="JQ356_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HAY4621338.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGC
                     AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHNDATVGQPKVESARDALTRINPHIA
                     ITPVNALLDDAELAALIAEYDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ
                     ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            complement(9452..10114)
                     /gene="fsa"
                     /locus_tag="JQ356_001181"
     CDS             complement(9452..10114)
                     /gene="fsa"
                     /locus_tag="JQ356_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY4621339.1"
                     /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP
                     QLHEAMGGQGRLFAQVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAE
                     GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA
                     KVLAASFKNPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWLGAFGRT
                     SI"
     gene            10245..11144
                     /locus_tag="JQ356_001182"
     CDS             10245..11144
                     /locus_tag="JQ356_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415345.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HAY4621340.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL
                     LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE
                     VKSVEEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPEIATALLQACHEAGIHTAVETC
                     LHVPWKYITPSLPYIDLFLADLKHIADAPFKQWTDGNAAKVLDNLKKLAAAGKKIIIR
                     VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD
                     APDLLDFAQQYACQKGLTATLRG"
     gene            11150..13582
                     /locus_tag="JQ356_001183"
     CDS             11150..13582
                     /locus_tag="JQ356_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HAY4621341.1"
                     /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
                     DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE
                     HIERFAALAREMAATETRESRRDELLAIAENCDLIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQTLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGNVFLPQEKALSAGNFNNFDEVMDAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
                     LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            13728..14543
                     /gene="ybiV"
                     /locus_tag="JQ356_001184"
     CDS             13728..14543
                     /gene="ybiV"
                     /locus_tag="JQ356_001184"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase YbiV"
                     /protein_id="HAY4621342.1"
                     /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIEFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLQSAYVSENAPEAFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPL
                     VIDKLHIAFDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
                     DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
     gene            14695..15960
                     /locus_tag="JQ356_001185"
     CDS             14695..15960
                     /locus_tag="JQ356_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HAY4621343.1"
                     /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
                     TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFSREQALGW
                     DQSMLDYLDRNRFDEVYKGPGDNFFGTLSTSRPEIYPIYWSQTQMQARQSEEMANAQS
                     FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP
                     HEDYETNWEGRFTLADLNIHGKRALGMDV"
     gene            complement(16201..17793)
                     /locus_tag="JQ356_001186"
     CDS             complement(16201..17793)
                     /locus_tag="JQ356_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HAY4621344.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
                     KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL
                     FKNLNLLLEVGEKLAVLGTNGVGKSTLMKTLVGDLQPDSGTVKWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
                     TPERVIDFSGNYEDYLRSKGIE"
     gene            18012..18932
                     /gene="ldtB"
                     /locus_tag="JQ356_001187"
     CDS             18012..18932
                     /gene="ldtB"
                     /locus_tag="JQ356_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY4621345.1"
                     /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
                     IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
                     KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
                     VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
     gene            complement(18991..20109)
                     /locus_tag="JQ356_001188"
     CDS             complement(18991..20109)
                     /locus_tag="JQ356_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HAY4621346.1"
                     /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL
                     FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
                     AQMAPLAGAMMLTLLLLCWCCFPGKVLQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE
                     FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS
                     HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLASLIA
                     LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN"
     gene            complement(20106..20573)
                     /locus_tag="JQ356_001189"
     CDS             complement(20106..20573)
                     /locus_tag="JQ356_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MntR"
                     /protein_id="HAY4621347.1"
                     /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK"
     gene            20759..20887
                     /gene="mntS"
                     /locus_tag="JQ356_001190"
     CDS             20759..20887
                     /gene="mntS"
                     /locus_tag="JQ356_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HAY4621348.1"
                     /translation="MNEFKRCMRVFSHSPFKVRLILLSMLCDMVNNKPQQDKPSDK"
     gene            21159..22742
                     /locus_tag="JQ356_001191"
     CDS             21159..22742
                     /locus_tag="JQ356_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY4621349.1"
                     /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
                     AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST
                     EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
                     LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT
                     YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD
                     GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK
                     NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY
                     TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP
                     FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF
                     QLQKVDYNHLGTDIFDPKP"
     gene            complement(22791..23306)
                     /gene="ompX"
                     /locus_tag="JQ356_001192"
     CDS             complement(22791..23306)
                     /gene="ompX"
                     /locus_tag="JQ356_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HAY4621350.1"
                     /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
                     GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
                     YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
     gene            complement(23359..23424)
                     /locus_tag="JQ356_001193"
     CDS             complement(23359..23424)
                     /locus_tag="JQ356_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621351.1"
                     /translation="METFCYMKWPVRHHKSRRVSH"
     gene            23659..24546
                     /gene="rhtA"
                     /locus_tag="JQ356_001194"
     CDS             23659..24546
                     /gene="rhtA"
                     /locus_tag="JQ356_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
                     /protein_id="HAY4621352.1"
                     /translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVT
                     ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA
                     LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW
                     AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS
                     TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS
                     MGSTLTVRKESKIKELDIN"
     gene            24845..25348
                     /gene="dps"
                     /locus_tag="JQ356_001195"
                     /gene_synonym="pexB"
     CDS             24845..25348
                     /gene="dps"
                     /locus_tag="JQ356_001195"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HAY4621353.1"
                     /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
                     FIESNIE"
     gene            25752..26498
                     /gene="glnH"
                     /locus_tag="JQ356_001196"
     CDS             25752..26498
                     /gene="glnH"
                     /locus_tag="JQ356_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HAY4621354.1"
                     /translation="MKSVLKVSLAALTLVFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
                     FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL
                     RDKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            26637..27296
                     /gene="glnP"
                     /locus_tag="JQ356_001197"
     CDS             26637..27296
                     /gene="glnP"
                     /locus_tag="JQ356_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HAY4621355.1"
                     /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
                     TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            27293..28015
                     /gene="glnQ"
                     /locus_tag="JQ356_001198"
     CDS             27293..28015
                     /gene="glnQ"
                     /locus_tag="JQ356_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017491583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HAY4621356.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     NPQVLIKNPPSQRLQEFLQHVS"
BASE COUNT         6980 a         7540 c         6970 g         6733 t
ORIGIN      
        1 tgtctttgca atatactccg tatcgacaga atcaataata ttataattac cttcgctatt
       61 ataaataatc agtttttcac gagcgagttg attcttggca atgatctcat gaccttgttt
      121 caaaaataga acttcatcat tagcgctgat ttgatcaaga tactcgttca aataccgcca
      181 gtttaaatcg acatgaattt tatctaccgc taacaaatcg tgatctttgc cgttgatacg
      241 tagcgtaaaa gagatacatt ttttacccgg acgatcaaag caattgtatg ccggattcca
      301 gctgttgtta gagtcatctg aagccaccga ccacggtcgt ttcgatgggt taaaatcggc
      361 aaaaataacc cgccctgact cgtcgacaag cggtccattt acttattcct gatgataaac
      421 aacgatttta tcattcgccc tccgtgaaaa gagataatat ttattatcat caagtaccag
      481 tcccaccgag tctaaaaatg gcatcatttc cattttcaga atcacggcac gttgaatctc
      541 ctctgtattt tttaataaat acagtgagtc ctttaatgtc agggccgaac gttcaatatc
      601 tttaaagaaa tagccaacgt ttttctgaat aagttcaaag cggctatcgg cacgttttac
      661 cgcgcgttcc gataccagtt gatagttaat gatgaaaaaa agaccaataa ataacagtgc
      721 tgccaataaa aataaaatta tcagccttat ctttatcttt tcgtataaac tcagcatgtt
      781 aatacattta acaaaataac tatctgaacg ctgtgccgct gcaaaaatag tcccttgctg
      841 cggcttttta accaaattac ccgattctac aaaatcagca gaaagttaca acacttgctt
      901 agggcaataa tttcctgtga ggtgattacc ctttcaagca atattcaaac gtaactatcc
      961 tttaattttc ggatccagcg catcgcgtaa accatcgccc aacaaattga acgccagtac
     1021 ggtcagaaaa atagccaggg ccggaaaaac agcgacatgc ggcgcgataa ccatatccgc
     1081 tcgtgcctca ttgagcattg ctccccactc tggtgtcggc ggctgcgcac cgaggccgag
     1141 aaatgacagg ctggcggcag agataatcga ggtgccaatg cgcatggtga aaaacaccac
     1201 gatagacgag acggtcccag gcaagatatg acgcaataaa atggtcatat cgctggcacc
     1261 aatactgcgt gctgactcaa taaaggtttg ctgtttcaac accagcgtgt tgccgcgcac
     1321 cagtcgggca aacgcgggga tggaaaaaat ggcgactgcg ataatcacgt tagcaatgcc
     1381 gcttcccaac accgcaacaa cagcgatcgc cagtaaaata cccgggaagg caaacagcac
     1441 atcgcaaatg cgcatgatca gccgatccca ccagccttca taatatccag ccaacaagcc
     1501 cagcaacgtc ccgatcgccg caccgataaa cacggcaaac acgcccgccg ccagcgagat
     1561 ttgcgcacca accaggacac ggctgaaaat gtcgcgcccc agtgaatcga cgccaaacca
     1621 gtgctgcaaa gaaggtccgt tattcagatt gtcataatca aaataatttt cggcgtcata
     1681 gggagcgatc cagcgtgcaa aaatggccac cacaatcaat aaaataacga ataatgcggc
     1741 ggtcatcgcc atatgctgac ggcgaaatcg tcgccagaat tcatgccacg gtgtacgcac
     1801 ctggtcaggt ttgaccagtg gcatggcgtt taacaccgcc tgacgtcgcc agttaaatag
     1861 tcgcatcctt acttgtacct gatagccggg ttaatggcgg cgtaaagcac atccaccact
     1921 aagttgataa gaataaattc cagcgagaaa agcagaattt ccgcctgaat caccgggtaa
     1981 tcgcgcattt ctacggagtc aacgagtaag cgtccaagtc cgggccagtt gaaaactttc
     2041 tccaccacga tagaaccacc gagcaaaaag ccaaactgta agcccatcat ggtcactacc
     2101 gggatcatcg cgttacgtag cccgtgtttg aggacaaccc aggtttcgct cacccctttc
     2161 gccctcgcgg tacgcatata atcttcgctt aaaacatcga caaacgacgc gcgggtaaag
     2221 cgcgccatca cggctgccac tgccgcgccg agcgtcaggg aggataaaat gtagtgctgc
     2281 caactgtctg ctcccacggt aggcagccag cccagttcaa cggagaatac ctgaattaaa
     2341 agcatcccca gcgcaaatgc cggaaacgag atccccgaca ccgcaatggt catactcaat
     2401 cgatccggcc aacgattacg ccagacggcg gcgataattc ccgccgccat accaaatatc
     2461 accgcccaga ccatactggt tatggtcagc cacagcgttg gcataaagcg gctggcaatc
     2521 tcatcggcaa ccggacgacg cgacaccatc gacaggccaa aatccccctg cacagcattg
     2581 ctgatatagt gccagaactg gtgatacagc ggctgatcca accccagctg ctgacgcacc
     2641 agttctataa cctgcgcatc agcttcgggc ccggcaatca atcgcgccgg atcgccgggc
     2701 agcatatgca caaataaaaa caccagcacc gagacgataa acagcgtcgg aatcaacccc
     2761 agtaagcgtt tgataacgta attaagcatt ccactccctg cgttgcttat tgcaaatccg
     2821 cgtcttcaaa gctgaagccg gtgtctggca tgatccaaaa accggtcagg tttttactgt
     2881 gtgccgacac cagtttttct accaccagcg ggatccacgg cgactcttgc cagatgatat
     2941 cctgcgccgc cttatacaag cgggtctttt ccgccggatc attagttttc agtgcctgag
     3001 ccaggaagtc gtccacctgt ttattgctgt aaaatgcggt attaaacagc gtcggtggcc
     3061 agttttgcga ggcgaacagt ggcgatagcg cccagtccgc ttcgccggtt gaagccgacc
     3121 agccagtgta gaacatccgc acgccgctct ctttttgccc tttaccttca acttctgccg
     3181 cccgctgtcc ggcatccatc gcggtcacct gggctttaat cccgacctgc gctaactgct
     3241 gctgggtaaa ttgcagcact ttctgcgcgg tgctgtggtt atgtgacgac cacagcgtgg
     3301 tactgaaacc gttgggatat cccgcctctt tcagtaattc gcgcgctttc actggatcgt
     3361 aaggccacgg tttataactt tgcgcgtagg cgatacttgg cggtaccaca ccagtagctg
     3421 gcgttgcata gcccgcaaag gcaactttca ccagcgccgg acggttaatg gcgtaattca
     3481 gcgcctcacg gaccttcggg ttatcgaacg gcttttgcgt cacgttcata ctgatataac
     3541 gctgcataat tgacggactg gccatcaact cgatattttt gtttttctcc agcagtgcgg
     3601 cctgctcgta gggaatgggg aaagcaaact gcgcttcacc ggtttgcagc attgccgcgc
     3661 gggtgttgtt atccgccacc ggacgccagg ttatgctgtc cagtttgggc aatcctggct
     3721 gccagtaacc cgcgaatttt ttcaccttca caaaatcggt ctgattccag gtatccagtt
     3781 catacggtcc ggttcccacc ggatgaaaac caatctcctt gccatatttt tccagcgctg
     3841 ccggtgaaat catcgcggtc gccggatgga caagaatatt aataaacgct gagaacggct
     3901 gtttgagggt aatctttacc gttgtcggat cgatcgcctc cgttttggca atattcttat
     3961 acaggttata gcgtttaaga tgattcgccg gatcgctggc ccggtccaga ttcgctttca
     4021 ccgccgcggc gttgaaatcg gtgccatcct ggaatttaat tccttcccgc aatttcacgg
     4081 tgtaagtaat gccgtcatcg gaaacggtat aactctccgc cagcacgttt ttcagtttca
     4141 tctctttatc cagaccgaac agcccctggt aaaacgattt cgctacggcc tgagataacg
     4201 tgtcattcgc gtcatacgga tcgagcgtgg tgaaattcga tcctaccgcc accaccacat
     4261 ctttggcagc gaatgcacaa gatgccatca acgctgtcgc aatgcccagc gccactaacc
     4321 cactacggtg tacagctctt gccattttat tctccgcctg aatgttatct acgcatgaat
     4381 gcgtattctg attgtggttg tgcgacgtaa tgccccggcc cgacgcattg caacgagacg
     4441 gctgccacct cttcgccacg cagatgaata ttgctgggaa gatcgtccga cagcagtaca
     4501 cgctgcggtc gttgtcggga cggttcagcg accggaactg ccgccagtaa tttacgcgta
     4561 taaggatgct gcgggttttc gaagaccgcg cgccgtggac caatttcaac aatttgcccg
     4621 agatacatca ccgccacacg atgactaatc cgctctacca cggccatatc gtgggagata
     4681 aacagatacg caatgccgaa atcacgctgg agatcgagca acaagttgat aatctgcccg
     4741 cgaatagaaa catccagcgc cgaaacggct tcgtcggcaa tgatcacttt tggattcaat
     4801 gccaacgcgc gagcaatgca gatgcgctgg cgctgaccgc cggaaaactc atgcgggtaa
     4861 cgccaggcat gttcaggtaa caggcccacg cgctccagca accacgcaac gcgtgcagcc
     4921 gcgtctttac ctggcaataa accgtgtaca cacagcggtt cgataatcga atcaccgatg
     4981 gtctgacgtg ggtccagcga agcgtaaggg tcctgaaaaa taaactgaat atcccggcgc
     5041 aatgcctgaa gtttgccagg tgacaaggta tcgattcgct gaccgttaaa gataatttcg
     5101 ccgccctgcg attcgaccag gcgcagcaac gcccgcccgg tagtggattt accgctgcca
     5161 gactcgccca ccagcgatag cgtttcgcca ggccagagat caaaactgac tttctcaacg
     5221 gcatgcactt cccgcgttac gcgattcaac aaaccgctgc gcaaagggaa acgggtgaca
     5281 agattacgca ctcgtaaaac aggttcgcca tccaccaccg ttttctgctc gatggggggt
     5341 tcctgtttcg ctggatgttc aagcgatatc aatgggaaac gtcggggata atctaaccct
     5401 ttcatcgcac caagttgcgg aacagcagct aacagcgcac gggtgtaagg atgttgcggt
     5461 gcatgaaaaa tctgttcgac ggtacccgtt tccaccgcct cgccctgata catcaccagt
     5521 acccgatcgg ctatctctgc caccacgccc atatcgtgcg tgataaagat aacgcccatc
     5581 gacatctctt tttgcaatac tttgattaat tgcaggatct gcgcctgaat agtgacatcc
     5641 agcgcggtgg ttggctcatc ggcaatcagc accgccgggc ggcatgacag cgccatcgca
     5701 atcatcactc gctggcgcat cccgccagag agttgatgcg gataacgtga aagaatggtt
     5761 tgtgcctcag gaatgcgtac ctgatccagc atccgcttcg cctcgaccat cgcttcttca
     5821 cgactggcgt tctgatgcag acgaattgat tcggcaatct gttcacccac agtaaatacc
     5881 gggttcagcg atgtcatcgg ctcctgaaat atcatcgcca tatccgcacc gcgaacatgg
     5941 cgcatttgtg cagcgctctg ctcgctaagt tcaatcactt cgcgactgcg ccgctgcaac
     6001 agcattttat cgcactgtac taaaccgccc gcctgttcca acaggcgcat caatgccaac
     6061 gcagtcactg acttaccgga gccggattcg ccaacaattg ccagcgtctc accgcgttgc
     6121 agactaaaag agagattgcg gaccgcagct attttctgct ggtcctgcat aaaggcaata
     6181 ttcagatttt caaccgccag cacattaccg gcatcaagtt catcactgtg tggcaacggt
     6241 gtcccctttt tcacggtaga taccggtggt tggcgtatcg cctgcgtagc cccaggcgcg
     6301 atacattcct tcggtgttaa acggtagcgc gacattccct tcatggccga tagcgattaa
     6361 gccaccgcta ccgccaagcg cagggagttt ttccattact acccgctcgc aggcttccgc
     6421 gagacttaat ccgccgtaat ccattaacgc ggcgatgtca tatgccgcca gcgcgcggat
     6481 gaagacttcg cccgtgccgg tacaagaaac cgccacactg gcgttattgg cgtagcatcc
     6541 ggcacccact aagggactat cgccaactcg tccgggtaat ttattggtca ttccgcctgt
     6601 ggacgtggct gccgccaaat tgccgtctaa atccaacgcc acggccccca cggtgcccat
     6661 tttctgtttt tcatccagtg gcgcaccgct atggtcgagg acggttgccc cttccttgcg
     6721 cgctgccagt agttgttcat aacgcaaagg cgtggagaaa atcgccggcg agacgcgctc
     6781 catgccacga gcaaacgcaa aattttctgc cccttcgcca atcatcatca catgcgggct
     6841 ttgctccatc accagccggg cggcaagaac cggattacgc agatgactaa cgcccgccac
     6901 cgcaccggct ttcagggtgt taccatccat cacacaggcg tccagttcat gggtttcatc
     6961 acgcgtaaag acagcgccaa ttccggcgtt aaacagtgga cactcttcca gcagacgcac
     7021 cgcttccgtc accacatcca gcgcactttc gcccgcttcc agcattttct gcccggtttc
     7081 aacaatggca gacaacgcct caatgtagcg taattcctgt tgcagactca tctgcgcgcg
     7141 gctaattgca cctgcgccac catgaattgc aatgactgct ttgcccatag tattcgtcca
     7201 ttaagggtgg ctcgccactt ttgctataaa tatcagaatt tttatgaatt actcattcaa
     7261 tttttgaata tagaaagatg gatatggcat gtaaaggcag gagccaacgc tacgcccgag
     7321 gtggcataca gtctgtggcg tttttctgac ataataggca aattcgattt tgcctccgca
     7381 ggagtgtttt catggaattt accaccggat tgatgtcgct cgacaccgcg cttaatgaga
     7441 tgctttctcg cgtcacccca ctgaccgccc aggaaacgct gccactggta cagtgttttg
     7501 gtcgtattct ggcgagcgat gtcgtttcgc cgcttgatgt tccggggttt gataactccg
     7561 caatggacgg ctacgcggtg cgtttagccg atattgcctc cgggcaaccg ctgcccgttg
     7621 ccggtaaatc ctttgccggt cagccgtatc atggtgaatg gcctgcgggc acctgcattc
     7681 gtattatgac cggtgcgccg gtgccggaag gctgcgaagc ggtggtgatg caggagcaga
     7741 ctgaacaaac ggacaatggc gtgcgtttta ctgctgaagt gcgtagcggg caaaatattc
     7801 gccgtcgcgg tgaagatatc tctgcaggtg cggttgtttt cccggcggga actcgcctga
     7861 ctaccgcaga gctgccagta attgcttcac tggggattgc cgaagttccg gtgattcgta
     7921 aagtgcgtgt agcgcttttt tctaccggtg atgaactcca gttgcccggt cagccgctgg
     7981 gtgacggcca aatctacgac accaaccgtc tcgccgtaca cctgatgtta gaacagctgg
     8041 gttgcgaggt aatcaactta gggattatcc gcgacgatcc ccatgccctg cgcgccgcat
     8101 ttattgaagc cgacagccag gcggatgtag tgatcagttc cggcggtgtt tcagtgggtg
     8161 aagcggatta caccaaaacg attcttgaag agctggggga gatcgccttc tggaagctgg
     8221 cgattaaacc aggtaaaccg ttcgcgttcg gtaaactcag caatagctgg ttctgcggcc
     8281 tgccgggcaa cccggtttca gcgacgctga ccttctatca actggtacag cctttgctgg
     8341 caaaactaag cggcaacacc gccagcggcc tgcccgcgcg ccagcgcgta cgcacagcgt
     8401 cccgcctgaa aaaaacgcca ggacgtcttg atttccagcg cggcgtgctg caacgcaacg
     8461 ccgacggtga acttgaagtg acgaccaccg gacatcaggg ttcacatata tttagctcct
     8521 ttagtctcgg caactgcttt atcgtgctgg aacgcgatcg cggcaatgtg gacgtgggcg
     8581 aatgggtgga agtagaaccg tttaacgcgt tgttcggagg cctgtaatgg cggaactcag
     8641 cgatcaggag atgctgcgct acaaccggca aatcattctg cgcggttttg attttgacgg
     8701 tcaggaggcg ctaaaagatt ctcgtgtgct gatcgtcggc ctcggtggac tcggctgcgc
     8761 agcttcgcag tatctggcaa gcgccggtgt cggcaacctg acgctgctcg acttcgacac
     8821 ggtttcgctc tcgaatctgc aacgccagac actgcacaat gatgccacgg tcgggcaacc
     8881 gaaggtggaa tccgcccgtg acgccctgac gcggatcaac ccacatatcg cgattacgcc
     8941 agtcaatgca ctgctagatg acgcagaact tgcagcattg attgctgaat acgatctggt
     9001 gctcgactgt acggataacg ttgcggtacg taatcaactg aacgcaggct gttttgccgc
     9061 gaaggtgccg ctggtttccg gcgcggcaat tcgtatggaa gggcaaatca cggtcttcac
     9121 ttatcaggac ggcgaaccgt gctatcgctg ccttagccgt ttgtttggcg agaacgcgtt
     9181 aacctgcgta gaagcaggcg tgatggcacc gttgatcggc gtaattggtt cgttgcaggc
     9241 aatggaagcg atcaaactgc tggcaggtta tggcaaaccg gccagcggga aaatcgtcat
     9301 gtacgatgcg atgacctgtc agtttcgcga aatgaaactg atgcgtaatc cggggtgtga
     9361 ggtgtgcggg cagtaattgc cacctccagg ccagataaga cgcggcactc cgccacgtca
     9421 tcagcaattt atgaggatgc agaacgtccg gttaaatcga cgttctgcca aacgctccca
     9481 gccagtcctg ttcaaacttc gccacagcgg catcaaccgc cggatagcta atcatctgtt
     9541 gtgccacatc cagtggcagc gtaattgatt cacatcctgc cagtaagcag tccagcgcct
     9601 gacgcgggtt tttgaaactc gctgccagca ctttcgcctg cggcgcatgc attttcaata
     9661 actggtgtaa gtcggtcaca gtctgaatgc cgctaccgcc ctgagcatca atacgattaa
     9721 cgtaaggcgc aacatattcc gcacctgcca gcgccgacag cagcccttgt gctgcgccat
     9781 ataccgcggt tcccagcgtt ggaatccctt ccgcttttaa catcttaata gctgccagcc
     9841 cctcggcggt caccggaact ttcaccacga tatccgcaat aatagaacgc aatttacgtg
     9901 cgtcattcac catcccttca gcagtggtag ccattacctg ggcaaacaga cgcccctgac
     9961 cgcccatcgc ttcatgaagt tgcggaagca caacatccag cggtttttta cccgcggcga
    10021 taatgcttgg gttagtggtc acacccgcca gcggaaaaat acgtgacagc gccttcactg
    10081 caacaacgtc tgaagtatcc agatacagtt ccataaccat cctcaaaatg tactttttgt
    10141 ctgaatgtag actatcacgg gaaaactctc tgaacagttg acgcacatca atccaacttt
    10201 cattcgaaag tattttaatg tttgaacgaa acagagaggc aactatgatt ttcaatattc
    10261 agcgctactc gacccatgat ggccccggta tccgcacggt cgtatttctt aaaggctgtt
    10321 cgctgggctg ccgctggtgt cagaacccgg aaagccgcgc ccgcacgcag gatctgctgt
    10381 atgacgcacg actgtgtctg gaaggctgcg agctgtgcgc taaggcagcg ccggaagtga
    10441 ttgagcgcgc attgaatggt ttgcttattc atcgggaaaa gttaaccccg gagcatctga
    10501 cggcgctaac cgactgctgc ccgacacagg cgttaaccgt gtgtggggaa gtgaaaagcg
    10561 ttgaggagat catggcgacc gttctgcgcg ataaaccgtt ttacgatcgc agcggcggcg
    10621 gcttaacgct ttcgggtggt gaacccttta tgcagccgga aatagcgacg gcgctactgc
    10681 aagcctgcca cgaggcaggc attcatactg cggtagaaac ctgtctgcat gtgccgtgga
    10741 aatatatcac cccttctctg ccctatatcg atctgtttct tgccgattta aaacacattg
    10801 ccgacgcgcc gtttaaacag tggaccgacg gtaacgccgc caaggtgctg gataacctga
    10861 aaaaactcgc cgcagcgggc aaaaaaatca ttatccgcgt gccgctgatt cagggcttta
    10921 atgccgacga aacctctgta aaagccatta ccgattttgc cgccgacgag ctgcacgttg
    10981 gcgaaattca ttttctgccc taccacacgc tgggcatcaa caaatatcac ttacttaatc
    11041 tgccctatga cgccccggaa aaaccgcttg atgcgccaga cctgctcgac tttgcccagc
    11101 agtatgcctg ccagaaaggg ttaaccgcga ccttacgagg ataacaacca tgaccacact
    11161 gaaactggac acgctcagcg accgcattaa agcgcacaaa aatgcgctgg tgcatattgt
    11221 gaaaccgccg gtctgtaccg agcgcgcgca gcactatacc gagatgtatc aacaacatct
    11281 cgataagccg atcccggtac gtcgcgcgct ggctctggcg catcacctgg cgaatcgcac
    11341 catctggatc aagcacgatg agttgatcat cggcaaccag gcaagcgagg ttcgcgctgc
    11401 gccgatcttc ccggaatata ccgtctcgtg gatcgaaaaa gagattgatg atctggcaga
    11461 tcgtcccggt gctggttttg cggtgagcga agagaacaaa cgcgttctgc atgaagtgtg
    11521 cccgtggtgg cgcggtcaga cggtacagga tcgctgctac ggcatgttta ccgatgagca
    11581 aaaaggtctg ctggcgaccg gaatcattaa agcggaaggc aatatgacct ccggcgatgc
    11641 gcacctggcg gtgaatttcc cgctgctgct ggaaaaaggt cttgatggtc tgcgcgagaa
    11701 agtagcggaa cgtcgctcgc gcatcaatct gacggtactg gaagatttgc acggcgaaca
    11761 gttcctgaaa gcgattgata tcgtgctggt ggcagtcagc gaacacattg aacgttttgc
    11821 agccctggcg cgtgaaatgg ccgcgaccga aacccgcgaa agccgtcgcg atgaactgct
    11881 ggcgatagca gaaaactgcg atcttatcgc ccaccagccg ccgcagactt tctggcaggc
    11941 gctgcaactg tgttacttca tccagttgat attgcagatc gaatctaacg gtcactcggt
    12001 atcgtttggt cgtatggacc agtatctcta cccgtactat cgccgagacg ttgaactcaa
    12061 ccagacactg gatcgcgaac acgccatcga attgctgcat agctgctggc tgaaactgct
    12121 ggaagtgaac aagatccgct ccggctcaca ctcaaaagcc tctgcgggaa gtcctctgta
    12181 tcagaacgtc accattggcg gacaaactct ggttgatggt caaccaatgg acgcggtgaa
    12241 tccactctct tacgcgatcc tcgaatcctg cggtcgcctg cgttccactc agcctaacct
    12301 cagcgtgcgt taccatgcag gaatgagtaa tgatttcctc gacgcctgcg tacaggtgat
    12361 ccgttgcggc ttcgggatgc cggcgttcaa caacgacgaa atcgtgatcc cggaatttat
    12421 taaactcggt attgaaccgc aggacgctta cgactacgca gcgattggtt gtatcgaaac
    12481 cgccgtcggt ggcaaatggg gctatcgctg taccggcatg agctttatca acttcgcccg
    12541 cgtgatgctg gcggcgctgg aaggcgggcg tgatgccaca agcggcaacg tgttcctgcc
    12601 acaagaaaaa gcgttgtcgg caggcaactt taacaatttc gatgaagtaa tggacgcgtg
    12661 ggatacgcaa atccgttatt acacgcgtaa atcaatcgaa atcgaatatg tcgtcgacac
    12721 catgctggaa gagaacgtgc acgatattct ctgctcggcg ctggtggatg actgtattga
    12781 gcgagcgaaa agtatcaagc aaggcggcgc gaaatatgac tgggtttctg gcctgcaggt
    12841 tggcattgcc aacctcggca acagcctggc ggcagtgaag aaactggtat ttgaacaggg
    12901 cgcgattggt cagcaacagc tggctgccgc actggcggat gacttcgatg gcctgactca
    12961 tgagcaactg cgtcagcggc tgattaacgg tgcgccgaag tacggcaacg acgatgatac
    13021 tgtcgatacg ctgctggctc gcgcttatca gacctatatc gacgaactga aacagtacca
    13081 taatccgcgc tacggtcgtg gtccggttgg cggcaactat tacgcgggta cgtcatctat
    13141 ctccgctaac gtaccgtttg gtgcgcaaac tatggcaacg ccggacgggc gtaaagccca
    13201 caccccgctg gcagaaggcg ctagtccggc ctctggtact gaccatctcg gccctactgc
    13261 ggtcattggc tcggtgggta aactgcctac ggcagcgatt ctcggcggcg tgttgctcaa
    13321 ccagaaactg aatccggcaa cgctggagaa cgaatctgac aagcagaagc tgatgatcct
    13381 gctgcgcacc ttcttcgagg tgcataaagg ctggcatatt cagtacaaca tcgtttcccg
    13441 cgaaacgctg ctggaggcga aaaaacatcc ggatcagtac cgcgatctgg tagtgcgtgt
    13501 cgcgggttat tccgccttct tcaccgcgct ctctccagac gctcaggacg atatcatcgc
    13561 tcgtactgaa catatgctgt aatctcttcg gcccggctgc ggcgtcgccg ggctaaatca
    13621 ttcacatcat caatttcatc cttactttca ttcgaaatat aatttgtgct ctgcgtcaca
    13681 ttgttattac actgttacgg tttcattttc gagccaggag cacacctatg agcgtaaaag
    13741 ttatcgtcac agacatggac ggtacttttc ttaacgacgc caaaacgtac aaccaaccac
    13801 gttttatggc gcaatatcag gaactgaaaa agcgcggcat tgagttcgtt gtcgccagcg
    13861 gtaatcagta ttaccagctt atttcgttct ttcctgagct aaaggatgag atctcttttg
    13921 tcgcggaaaa cggcgcactg gtttacgaac atggcaagca actgttccac ggcgaactga
    13981 cccgacatga atcgcggatt gttattggcg agttgctaaa agataagcaa ctcaattttg
    14041 tcgcctgcgg tctgcaaagt gcatatgtca gcgaaaatgc ccccgaagca tttgtcgcac
    14101 tgatggcaaa acactaccat cgcctgaaag ctgtaaaaga ttatcaggag attgacgacg
    14161 tactgttcaa gttttcgctc aacctgccag atgaacaaat cccgttagtg atcgacaaac
    14221 tgcacatagc gttcgatggc attatgaaac ccgtcaccag tggttttggc tttatcgacc
    14281 tgattattcc cggtctacat aaagcaaacg gtatttcgcg gttactgaaa cgctgggatc
    14341 tgtcaccgca aaatgtggta gcgattggcg acagcggtaa cgatgcggag atgctgaaaa
    14401 tggcgcgtta ttcctttgcg atgggcaatg ctgcggaaaa cattaaacaa atcgcccgtt
    14461 acgctaccga tgataataat catgaaggcg cgctgaatgt gattcaggcg gtgctggata
    14521 acacatcccc ttttaacagc tgacctctct accggagccg tgcgctccgg ttttcccttc
    14581 tttttacatc ctgtacatca catcaaatca ttaaacttgc attaacttat ttataactta
    14641 tattgtcaca tgcaaatcat aatggtttcg aatgaaagtt aatgagaggt ggttatggct
    14701 tctactttta ccagcgacac attgccagcc gatcacaaag cagctatccg tcagatgaag
    14761 cacgcgctgc gggcgcagct tggcgacgtc cagcagatct ttaatcagct aagcgatgac
    14821 attgccacgc gagtggctga aatcaacgca ctcaaagcac agggcgatgc cgtctggccg
    14881 gtgctgtctt atgccgatat caaagcaggt catgttactg cagagcagcg cgaacagatt
    14941 aaacgtcgcg gttgtgcggt gataaaaggc catttctccc gcgaacaagc gctaggctgg
    15001 gatcagtcga tgctggacta tctggaccgc aaccgctttg acgaggtcta caaaggcccc
    15061 ggcgataatt tcttcgggac gctcagcact tcacgtcccg agatttaccc catctactgg
    15121 tcgcagacgc aaatgcaggc ccgccagagt gaagaaatgg cgaatgcgca gtcgtttctc
    15181 aatcgtctgt ggacatttga aagtgatgga aagcaatggt ttaacccgga tgtgagcgtc
    15241 atctaccctg accgtatccg ccgccgtccg cccggaacga cctccaaagg tcttggagcg
    15301 cataccgact ccggggcgct ggaacgctgg ctgcttccag cgtatcagcg cgttttcgcc
    15361 aacgtcttta atggcaatct ggcgcaatat gatccctggc atgcggcaca tcgtacggaa
    15421 gttgaagagt acacggtgga caacaccacc aaatgttccg tgtttcggac attccagggc
    15481 tggacagcgc tctctgatat gctgcctggt caggggttgc tgcacgttgt gcccattcct
    15541 gaagccatgg cgtacgtact gttacgtccg ctgcttgatg atgtgccgga ggatgaactg
    15601 tgcggcgtag cgcccggaag agtgttgccg gtatcagagc aatggcatcc actgttaatt
    15661 gaggcgttaa ccagcattcc aaaactcgag gccggagact ccgtctggtg gcactgcgac
    15721 gtcatccatt ccgttgcccc cgttgaaaat caacagggtt ggggcaacgt gatgtacatt
    15781 cctgcggcac cgatgtgcga gaaaaatctt gcctacgcgc acaaggtgaa ggccgcactg
    15841 gaaaaaggcg catcgccggg cgacttcccg cacgaggact atgaaacaaa ctgggaagga
    15901 cgctttacgc ttgccgacct caacattcac ggtaagcgag cgttgggcat ggatgtttga
    15961 gagttaatgg aagtgaattg atgtgggatt aagaaaatcg attcgacgtt actcagattg
    16021 ctgacaagtg cgctttctta atgcctgatg cggcgttaac gccttatctg gcctacaaag
    16081 tcctgcagat tcaatatatt acaggtactg cgtaggcctg ataagcgtag cgcatcaggc
    16141 tattttgcat ttgtcatcag ccgccgtcac cccgacagta tcggggtgac ggataatcac
    16201 ttactcgatc cctttactac gcaggtaatc ttcgtaatta ccgctaaagt cgatcacgcg
    16261 ttccggggtg atttccagaa tgcgggtcgc cagggagctt acgaactcac ggtcgtgtga
    16321 aacaaagatc agcgtgccct gatacagttc cagcgccatg ttcagtgact cgatggattc
    16381 catatccagg tggttggtcg gttcgtccat gatcagaatg ttcggcttct gcatcattaa
    16441 cttaccaaac agcatccgcc ctttttcccc accggaaagc actttagctg gctttttgat
    16501 gtcgtcctgg ctgaacagca aacgaccgag aatgctgcgt accgcctgct cgtcatcgcc
    16561 ttcctgcttc cactgactca tccattcgaa cacggtcaga tcattttcaa actcatattc
    16621 gtggtcctgg gcgtagtaac caatgcgcgc gttttcagac cattttacgg tgccgctgtc
    16681 cggttgcaga tcgcccacca gcgttttcat cagcgttgat ttaccgacgc cgttggtacc
    16741 cagtaccgca agtttttcac cgacctccag cagcaggttg agatttttaa acagtggacc
    16801 gttatcaaac cctttggtca gaccttccac ttccagcgcg ttacggaaca gtttcttatc
    16861 ctgttcaaaa cggatgaacg ggttctgacg gctggaggct ttcacctctt ccagtttgat
    16921 tttatcaatc tggcgcgcgc gcgaagttgc ctggcgagat ttcgaggcgt tggcgctaaa
    16981 gcggctaacg aaagattgca actcagcaat ctgcgctttc ttcttggcgt tatcggccag
    17041 cagacgttca cgcgcctggg tcgccgccgt catgtactca tcgtagttac ccggataaac
    17101 gcgcagctcg ccgtaatcca gatccgccat gtgggtacag accatgttaa ggaagtgacg
    17161 gtcgtgcgag atgatgatca tggtgctgtc acgctcgttc agcacctgtt ccagccagcg
    17221 aatggtgtcg atgtcgaggt tgttggtcgg ttcgtcgagc aggagaatat ccggatcagc
    17281 aaacagcgcc tgcgccagaa gcacacgcag cttccagcca ggagcaactt cactcatcgg
    17341 gccgtagtgc tgttccactg gaattcccac gccaagcaac aattcaccgg cgcgagcttc
    17401 cgcagagtaa ccgtccattt cgccgtattt aacttccaga tcggccactt tatagccgtc
    17461 ttcctcactc atttccggca aagcatagat gcggtcacgc tcctgcttca cttcccacaa
    17521 ctctttatgc cccatgatca ccgtatccag cacagtgaac tcttcaaagg caaactgatc
    17581 ctgacgcagc ttaccaatgc gctcgttggg atcgagggaa acgttaccca aagtcggctc
    17641 taagtcgccg ccgaggatct tcataaaggt ggatttacca ctaccgttcg cgccaatcag
    17701 gccgtaacgg ttgccgccgc caaatttgac ggaaatgttt tcaaacaacg gcttactgcc
    17761 gaactgcatg gtgacgttac tggaaactaa cacaggcgta tcctgaaaag agatatgaca
    17821 aaccgcgcat tatgccataa gtctgaaaga agatcctgct cctcgcttaa ggtctacact
    17881 caagccaaag gcaaaaaatg tgatttcgta cacatctgat ttcactgtga gctggaatga
    17941 acttataatg cgcttccaat actctaatat tctcaaccca atggcctgcc aggcacaaaa
    18001 tctcgcttaa catgaatatg aaattgaaaa cattattcgc agcggccttc gctgttgtcg
    18061 gcttttgcag taccgcctct gcggtaactt atcctctgcc aaccgacggg agtcgcctgg
    18121 ttggtcagaa tcaggtgatc accattcctg aaggtaacac tcagccgctg gagtattttg
    18181 ccgcggagta ccagatgggg ctttccaata tgatggaagc gaacccgggt gtggatacct
    18241 tcctgccgaa aggcggtact gtactgaaca ttccgcagca gctgatcctg ccggataccg
    18301 ttcatgaagg catcgtcatt aacagtgcag agatgcgtct gtattactat ccgaaaggga
    18361 ccaacaccgt tatcgtgctg ccgatcggca ttggtcagtt aggcaaagat acgcctatca
    18421 actggaccac caaagttgag cgtaagaaag caggcccgac ctggacgccg accgcaaaaa
    18481 tgcacgcaga gtaccgcgct gcgggcgaac cgcttccggc tgtcgttccg gcaggtccgg
    18541 ataacccgat gggtctgtat gcactctaca tcggtcgcct gtatgctatc catggcacca
    18601 acgccaactt cggtatcggc ctgcgtgtaa gtcatggttg tgtgcgtctg cgtaacgaag
    18661 acatcaaatt cctgttcgag aaagtaccgg tcggtacccg cgtacagttt attgatgagc
    18721 cggtaaaagc gaccaccgag ccagacggca gccgttatat tgaagtccat aacccgctgt
    18781 ctaccaccga agcccagttt gaaggtcagg aaattgtgcc aattaccctg acgaagagcg
    18841 tgcagacagt gaccggtcag ccagatgttg accaggttgt tcttgatgaa gcgattaaaa
    18901 accgctccgg gatgccggtt cgtctgaatt aatcttcaaa acttaaagca aaaggcggac
    18961 tcataatccg ccttttttat ttgccagacc ctagttggcc gggagtataa ctaacaaaac
    19021 atatcccacc aacgccgccc acaacagcat cggtattgaa tagagatgga aacgccacca
    19081 gatgcggcga tcgttcgcca tacgtagcgc aatcaaactt gccagcgatc cgggtaataa
    19141 cccaaagcca cctacgttta ccgcccatgc cagtaataaa gacggcggca catagttcag
    19201 caacaatatg gtactcggca cgttactgat cacctgcgat aaaccgattg ccgttaacca
    19261 taacccgggt tcagatagat gactcacgtt acccaacacg ccttgcaacg ctggaagctg
    19321 ggtcagtaaa tggacgtcga taaacatcgc cataaacacc agcagcagcg tccagtccac
    19381 actgagcacc acgcgacgtg ccagcagcgc aaagcctgcc gccacaatca ccagtcccca
    19441 cagctcttgt ttgaactcca gcgccgttag aaagacgata tacagcccca gacaactcca
    19501 caccagccgc ggtttccact ccggtgtttg cacccccgta tggtattgca gcacctttcc
    19561 agggaaacaa caccagcaca ggagcaggag cgtcagcatc attgcgccag ccagcggtgc
    19621 catttgggca ataaatccgg caaacgaaag accagaacgt ccccagataa gaatattttg
    19681 cgggttgcca attggcgtca gtagcgaacc agcattgact gccagcgcct caaaaataat
    19741 cagacgatta accgggatct cacacagtct ttttagcgtg atagtcagcg gaacaacaat
    19801 aaacagcgcg acatcgttgg tcagaaaggt agaaagcagc gccgccgcca gcaccataaa
    19861 catcgccagc cgacgctccg tagcaaagcg gcgcaccatt ttgcgcccca gcacatcaaa
    19921 ataaccgctt aactccacac ctttggtcag cagcatcagg ccgcttaagg tgatgatggt
    19981 gtgccagtcg atagcagcag gccaggattt cggtgcaaag ggcacgaaaa agcttaatcc
    20041 gataccaaca agaattaata actgaaaaaa acgatcgcct tgcagcgtgc gtaaaaaagg
    20101 caggctcatt tggcaccgtg tttctgggta aacaaacgaa aagcgtcgag cgtctcttca
    20161 ctaacatggt gctccatgcc ttccgcgtcg cgacgggcga tttccggact gacgcccaac
    20221 accaacaaga aattttcgac tatctgatgt cgctcgcggc tttcctgcgc cagcttctct
    20281 ccttctgccg ttaaaaacac gccacgccag gggatcattt caatcagccc catggttgcc
    20341 agccgcttaa gcattttagc caccgtcggt tgcgaaactc ccagacgagc agccatgtcc
    20401 acctgacgag cttcccccac ttccctgatc aagtcagaaa tcagctcaac gtaatcatca
    20461 ataagctcgc gccgatgcgc ctctctgacc tggcggaacc cttcaacgtg ctcttccacg
    20521 ttcactaact gcgtcacttt ttttgctgtt ggcgtacctg cgcgacgact cattgtgctt
    20581 cctcattatg gtgacgcata catagcgttc tcatttcgtg cgcacattgt aaaccagagt
    20641 tgcgaaggta caaaaaatta acgttttagc aatagctata taatatagcc tgtgctatat
    20701 ctgtatgtaa tgcaatcatc cctcaaggat cgacgggatt agcaagtcag gaggtcttat
    20761 gaatgagttc aagaggtgta tgcgcgtgtt tagtcattct ccctttaaag tacggttaat
    20821 actgctctct atgttgtgcg atatggtcaa caacaaaccg cagcaagata aaccttccga
    20881 taaatagcgg cgtcgcggta cgccgcttca ctcctgcttt catgcaggca taacgcgttt
    20941 tggcctgaaa aaccccactt tttgtcggat ttgcaatccc cttcgcaaaa gatttgttcg
    21001 tcagtagttg acctgaacgg cggctcgctc tatcttcttg cagccctgcg tatattgcgg
    21061 ctcgcggatg cggacccctt tccactcttc acgcactctt gcaggtattg acccttgacg
    21121 ccagggtaag cacatggcgt ttgttacgat agtggcatat gaatttaacc ctcaaagaat
    21181 cgcttgttac ccgtagccgg gtatttagcc cgtggactgc gttctacttt ttacagtcgc
    21241 tattaattaa cctcggctta ggttacccct tcagtttgct ctacaccgct gcgtttacgg
    21301 ctattttgct tttgctatgg cgaacattgc ctcgcgtaca aaaagttctg gtcggtgtca
    21361 gttcgctggt ggcggcttgt tatttccctt ttgctcaggc ctacggcgcg cctaatttca
    21421 atacattgct ggcattgcac tccaccaata tggaagagtc gaccgaaatc ctgacgattt
    21481 ttccgtggta cagctacctg gtcggcttat ttatttttgc gctcggcgta atagcaatca
    21541 ggcgaaaaaa agagaatgaa aaagcgcgct ggaatacctt cgacagcctg tgtctggtat
    21601 tcagtgtggc gacatttttt gttgctcccg tgcaaaacct ggcctggggt ggcgtattta
    21661 aactgaaaga tactggctat ccggtatttc gttttgctaa ggatgtcatc gtcaataata
    21721 acgaggtgat tgaagagcaa gaacggatgg caaaactttc cggaatgaaa gatacctgga
    21781 cggtcactgc cgttaagccg aagtatcaga cctatgtggt ggtgatcggt gaaagcgcgc
    21841 gtcgcgatgc cctcggtgcc tttggcggtc actgggacaa taccccgttt gccagcagcg
    21901 ttaacggttt gatatttgct gactacattg ccgccagtgg ctccacgcag aaatcgcttg
    21961 gcttaacgct caatcgcgta gtcgatggca aaccacagtt tcaggataac tttgtcaccc
    22021 tggcaaatcg cgcgggcttc cagacctggt ggttttccaa ccagggccaa atcggcgaat
    22081 acgatactgc tatcgccagc atcgccaaac gtgcagatga agtgtacttc ctgaaagaag
    22141 gtaattttga agcagataaa aacacgaaag acgaagcgtt actggatatg accgctcaag
    22201 tgctggcgca agagcactcg caaccgcagc tgattgttct gcatctgatg ggctcgcatc
    22261 cgcaggcctg cgacaggaca caaggcaaat acgaaacctt tgtgcaatcg aaagaaacgt
    22321 cgtgctatct ctataccatg acgcaaacgg acgatttact gcgcaagctg tacgatcagt
    22381 tacgcaacag cggcagcagc ttctctctgg tttacttttc tgaccacggt ctggccttta
    22441 aagagcgcgg caaagacgtg caataccttg cccatgatga taaatatcag caaaatttcc
    22501 aggtgccttt tatggtcatt tccagcgacg ataaagcgca tcgggtgatt aaagcccgcc
    22561 gctcagccaa tgacttctta ggctttttct cgcagtggac gggaattaaa gcgaaggaaa
    22621 taaatatcaa atacccgttt atatctgaga agaaagccgg gccgatatac atcaccaact
    22681 tccagttaca gaaggtggat tacaaccatc tcggaaccga tattttcgac ccgaaacctt
    22741 aaaaacaaaa atccgccccg agaggcggat tttttatatc accaaagtga ttagaagcgg
    22801 taaccaacac cggcaatcca ggtgcctacg tcaacgctac gaatacggct ctgctcgtaa
    22861 gagaagtcca gagcaacgtt ttccatcggg ttgaactgca gaccagcacc gtaggagaaa
    22921 ccgtagtcgc tggtgtcgtg tttgtaggtc gggtattcag tggtctggaa tttaccataa
    22981 cccacaccca ctacaccgta gatgcttgcc cagtcgttaa tgcggtaagc cggaccagca
    23041 gtgatgccgt agtactggtt tttgttgtag tcaccagagc ttgcagtacg acttttctcg
    23101 gtgtaagtga aagaaccgat cacacccagc gggctgttgt cttcttcata gcggtatttc
    23161 aggttgaaac cgcccatttt gttcatttgg ccctgagcgt cgctctgtgc gtaaccgcca
    23221 gttacggtag aagtcgcagc tacggaagta cctgcggtga aagccagaac tgcggccagt
    23281 gctgaaagac atgcaatttt tttcataacc acctcaaatg tgattcaaat aagtcctaag
    23341 ttttaaatat atcaaaaatt aatgggaaac tcttcgcgat ttgtgatgtc taacgggcca
    23401 tttcatgtaa cagaacgttt ccatacaccg ctatccatct aaatttaaat cactttttca
    23461 gagaactgcg taagtattac gcatgttttc cctgtcattc atccagatta ttcctaatca
    23521 ccagactaat gattccatca atcctggcgc attttagtca aaacggggga aaattttttc
    23581 aacaaatgct caaccagcat tgggtatatc cagtacactc cacgctttac ttaagtctag
    23641 atatttgtgg gagaaaggat gcctggttca ttacgtaaaa tgccggtctg gttaccaata
    23701 gtcatattgc tcgttgccat ggcgtctatt cagggtggag cctcgttagc taagtcactt
    23761 tttcctctgg tgggcgcacc gggtgtcact gcgctgcgtc tggcattagg aacgctgatc
    23821 ctcatcgcgt tctttaagcc atggcgactg cgctttgcca aagagcaacg gttaccgctg
    23881 ttgttttacg gcgtttcgct gggtgggatg aattatcttt tttatctttc tattcagaca
    23941 gtaccgctgg gtattgcggt ggcgctggag ttcaccggac cactggcggt ggcgctgttc
    24001 tcttctcgtc gcccggtaga tttcgtctgg gttgtgctgg cggttcttgg tctgtggttc
    24061 ctgctaccgc tggggcaaga cgtttcccat gtcgatttaa ccggctgtgc gctggcactg
    24121 ggggccgggg cttgttgggc tatttacatt ttaagtgggc aacgcgcagg agcggaacat
    24181 ggccctgcga cggtggcaat tggttcgttg attgcagcgt taattttcgt gccaattgga
    24241 gcgcttcagg ctggtgaagc actctggcac tggtcggtta ttccattggg tctggctgtc
    24301 gctattctct cgaccgctct gccttattcg ctggaaatga ttgccctcac ccgtttgcca
    24361 acacggacat ttggtacgct gatgagcatg gaaccggcgc tggctgccgt ttccgggatg
    24421 attttcctcg gagaaacact gacacccata cagctgctgg cgctcggcgc tatcatcgcc
    24481 gcttcaatgg ggtctacgct gacagtacgc aaagagagca aaataaaaga attagacatt
    24541 aattaaattt acatttctgc atggttatgc ataaccatgc agaatttctc gctacttttc
    24601 ctctacaccg tctttatata tcgaattatg caaaagcata tttattccga aaattcctgg
    24661 cgagcagata aataagaatt gttcttatca atatatctaa ctcattgaat ctttattagt
    24721 tttgtttttc acgcttgtta ccactattag tgtgatagga acagccagaa tagcggaaca
    24781 catagccggt gctatactta gtctcgttaa ttactgggac ataacatcaa gaggatatga
    24841 aattatgagt accgctaaat tagttaaatc aaaagcgacc aatctgcttt atacccgcaa
    24901 cgatgtctcc gacagcgaga aaaaagcaac agtagagttg ctgaatcgcc aggttatcca
    24961 gtttattgat ctttctttga ttaccaaaca agcgcactgg aacatgcgcg gcgctaactt
    25021 cattgccgta catgaaatgc tggatggctt ccgcaccgca ctgatcgatc atctggatac
    25081 catggcagaa cgtgcagtgc agctgggcgg tgtagctctg gggaccactc aagttatcaa
    25141 cagcaaaacc ccgctgaaaa gttacccgct ggacatccac aacgttcagg atcacctgaa
    25201 agaactggct gaccgttacg caatcgtcgc taatgacgta cgcaaagcga ttggcgaagc
    25261 gaaagatgac gacaccgcag atatcctgac cgccgcgtct cgcgacctgg ataaattcct
    25321 gtggtttatc gagtctaaca tcgaataaat ccatcgctga tggtgcagaa ctttagtacc
    25381 cgataaaagc ggcttcctga caggaggccg ttttgttttg cagcccacct caacgcactt
    25441 atttagtgca tccatctgct atctccagct gattaagtaa attttttgta tccacatcat
    25501 cacacaatcg ttacataaag attgtttttt catcaggttt tacgctaaat aatcactgtg
    25561 ttgagtgcac aattttagcg caccagattg gtgccccaga atggtgcatc ttcagggtat
    25621 tgccctataa atcgtgcatc acgtttttgc cgcatctcta aaaatcaatg agttgcaaaa
    25681 ctggcacgat tttttcatat atgtgaatgt cacgcagggg atcgtcccgt ggatagaaaa
    25741 aaggaaatgc tatgaagtct gtattaaaag tttcactggc tgcactgacc ctggtttttg
    25801 cggtttcttc tcatgccgcg gataaaaaat tagttgtcgc gacggatacc gccttcgttc
    25861 cgtttgaatt taaacagggc gataaatatg tgggctttga cgttgatctg tgggctgcca
    25921 tcgctaaaga gctgaagctg gattacgaac tgaagccgat ggatttcagt gggatcattc
    25981 cggcactgca aaccaaaaac gtcgatctgg cgctggcggg cattaccatc accgacgagc
    26041 gtaaaaaagc gatcgatttc tctgacggct actacaaaag cggcctgtta gtgatggtga
    26101 aagctaacaa taacgatgtg aaaagcgtga aagatctcga cgggaaagtg gttgctgtga
    26161 agagcggtac tggctccgtt gattacgcga aagcaaacat caaaactaaa gatctgcgtc
    26221 agttcccgaa catcgataac gcctatatgg aactgggcac caaccgcgca gacgccgttc
    26281 tgcacgatac gccaaacatt ctgtacttca tcaaaaccgc cggtaacggt cagttcaaag
    26341 cggtaggtga ctctctggaa gcgcagcaat acggtattgc gttcccgaaa ggtagcgacg
    26401 agctgcgtga caaagtcaac ggcgcgttga aaaccctgcg cgagaacgga acttacaacg
    26461 aaatctacaa aaaatggttc ggtactgaac cgaaataata acgctacacc tgtaaagcgc
    26521 actggcagtt ccctctcccc tctggggaga ggattagggt gaggggcgca aacccgctcc
    26581 ggggccatta attaccctga atttgattat ttacaccacg gtaacaggaa caacatatgc
    26641 agtttgactg gagtgccatc tggcctgcca ttccgcttct gattgaaggt gccaaaatga
    26701 ccctgtggat ttcggtcctc ggtctggctg gcggtctggt aatcggattg ctggcaggtt
    26761 ttgcacgcac cttcggtggt tggatagcca accacgtcgc gctggtcttt attgaagtga
    26821 tccgcggcac acctatcgtc gtccaggtga tgtttatcta tttcgccctg ccgatggcgt
    26881 ttaacgactt acgcatcgac ccatttactg cggcggtggt caccatcatg atcaactccg
    26941 gcgcgtacat tgcggaaatc acgcgtggtg cggtgctgtc tattcacaaa ggttttcgtg
    27001 aagcaggact ggcgctcggt ctttcacgtt gggaaaccat tcgctacgtc attttaccgc
    27061 tggcactgcg tcgtatgctg ccgccgctgg gtaaccagtg gatcatcagc attaaagaca
    27121 cctcgctgtt tattgttatc ggcgtggcgg aactgacccg tcaggggcaa gaaattattg
    27181 ccggtaactt ccgcgccctt gagatctgga gcgccgtggc ggtgttctat ctgattatta
    27241 ccctggtgct gagctttatt ctgcgtcgtc tggaaagaag gatgaaaatc ctgtgattga
    27301 atttaaaaac gtctccaagc actttggccc aacccaggtg ctgcacaata tcgatttgaa
    27361 cattgcccag ggcgaagtcg tggtgattat cgggccgtcc ggttccggta aatcgaccct
    27421 gctgcgctgc atcaacaaac tggaagaaat cacctccggc gatctgattg tcgatggcct
    27481 gaaggttaac gatccgaaag ttgacgagcg cctgattcgc caggaagcag gtatggtgtt
    27541 ccagcagttt tacctcttcc cgcatctgac ggcgctggaa aacgtcatgt ttggtccgct
    27601 acgcgtgcgt ggcgcgaaca aagaagaggc ggaaaaactg gcgcgtgagc tgctggcgaa
    27661 agtcggtctg gcagaacgtg cacatcacta cccttccgaa ctttctggtg gtcaacagca
    27721 gcgtgtggcg attgcccgcg cgctggcggt gaagccgaaa atgatgctgt ttgatgaacc
    27781 gacttccgct cttgacccgg aactgcgcca tgaagtgctg aaggttatgc aggatctggc
    27841 tgaagaaggg atgacgatgg tgatcgtgac ccacgaaatc ggttttgccg agaaagtagc
    27901 ttcgcggctg atctttatcg acaaaggccg gattgcggaa gatggcaatc cgcaggtgtt
    27961 gatcaagaac ccgccgagcc agcgcttgca ggaatttttg cagcacgtct cttaataaga
    28021 cacattgcct gatgcgctac gcttatcagg cctacaggat atctggcaac ttattaaaat
    28081 tgcatgaact tgtaggacgg ataaggcgtt cacgccgcat ccggcaaaaa agcccgcacg
    28141 ttgtcagcaa tctgcttaat atcccttcct ccctttcacc cgaaagggag gcacaccaga
    28201 ttcctctcat ttaaaatcgc ccc
//
LOCUS       DADKRT010000032        28118 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.032, whole genome shotgun sequence.
ACCESSION   DADKRT010000032 DADKRT010000000
VERSION     DADKRT010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 28118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28118
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.032"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(206..1306)
                     /gene="chaA"
                     /locus_tag="JQ356_001199"
     CDS             complement(206..1306)
                     /gene="chaA"
                     /locus_tag="JQ356_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HAY4621357.1"
                     /translation="MSNAQEAVKTRHKEISLIFPVLALVVLFLWGSSQTLPVVIAINL
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH
                     SSVWHAIWLIIHLIAVIAVTKMNASPLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
     gene            1576..1806
                     /gene="chaB"
                     /locus_tag="JQ356_001200"
     CDS             1576..1806
                     /gene="chaB"
                     /locus_tag="JQ356_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HAY4621358.1"
                     /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRD
                     DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
     gene            1964..2659
                     /locus_tag="JQ356_001201"
     CDS             1964..2659
                     /locus_tag="JQ356_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY4621359.1"
                     /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE
                     GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG
                     RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHP
                     EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA
                     ENYPDGVLRPGFA"
     gene            complement(2703..3056)
                     /gene="ychN"
                     /locus_tag="JQ356_001202"
     CDS             complement(2703..3056)
                     /gene="ychN"
                     /locus_tag="JQ356_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/F sulfur relay family protein YchN"
                     /protein_id="HAY4621360.1"
                     /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
                     AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
                     ELAQWTLSADKVLTF"
     gene            3240..4634
                     /gene="ychO"
                     /locus_tag="JQ356_001203"
     CDS             3240..4634
                     /gene="ychO"
                     /locus_tag="JQ356_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415738.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter invasin YchO"
                     /protein_id="HAY4621361.1"
                     /translation="MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLP
                     DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV
                     ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYFTWSQLGLTQQDNGLVSNV
                     GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLLANFYQPFAAWHEQT
                     ATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGL
                     NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY
                     DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ
                     ILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEYNQGQRVSSNEITLTLVE
                     PFDALSNDELRWEP"
     gene            complement(4635..5285)
                     /gene="narL"
                     /locus_tag="JQ356_001204"
     CDS             complement(4635..5285)
                     /gene="narL"
                     /locus_tag="JQ356_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HAY4621362.1"
                     /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
                     IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
     gene            complement(5278..7074)
                     /gene="narX"
                     /locus_tag="JQ356_001205"
     CDS             complement(5278..7074)
                     /gene="narX"
                     /locus_tag="JQ356_001205"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HAY4621363.1"
                     /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDEQLAQLQGL
                     QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
                     VFMALLLVFTIIWLRVRLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
                     MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
                     NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
                     ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPASSRELLSQIRNELNASWAQLRELLT
                     TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
                     NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
                     CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
     gene            7413..8804
                     /gene="narK"
                     /locus_tag="JQ356_001206"
     CDS             7413..8804
                     /gene="narK"
                     /locus_tag="JQ356_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HAY4621364.1"
                     /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
                     RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
                     WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
                     LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKK"
     gene            9320..13042
                     /locus_tag="JQ356_001207"
     CDS             9320..13042
                     /locus_tag="JQ356_001207"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HAY4621365.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR
                     SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
                     VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
                     EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
                     CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
                     TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
                     YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
                     GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
                     NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD
                     SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERAYPATYERFTSIGPLMEKIGNGG
                     KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
                     AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
                     HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNPEKALN
                     FLTPHQKWGIHSTYSDNQLMLTLGRGGPVVWLSEADAKELGIADNDWIEVYNSNGALT
                     ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYAH
                     LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGND"
     gene            13060..14598
                     /gene="narH"
                     /locus_tag="JQ356_001208"
     CDS             13060..14598
                     /gene="narH"
                     /locus_tag="JQ356_001208"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HAY4621366.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
                     ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
                     PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
                     FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
                     GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
                     ADAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
                     MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN
                     LLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA
                     NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
                     EPHP"
     gene            14595..15305
                     /gene="narJ"
                     /locus_tag="JQ356_001209"
     CDS             14595..15305
                     /gene="narJ"
                     /locus_tag="JQ356_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HAY4621367.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQEMFEVIAASKNLSKEDAHALG
                     IFLRDLTAMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
                     LQLNSRELPDHLPLYLEYLSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDL
                     LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            15305..15982
                     /gene="narI"
                     /locus_tag="JQ356_001210"
     CDS             15305..15982
                     /gene="narI"
                     /locus_tag="JQ356_001210"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HAY4621368.1"
                     /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFAGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
                     IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QLVRARH"
     gene            complement(16165..16296)
                     /locus_tag="JQ356_001211"
     ncRNA           complement(16165..16296)
                     /ncRNA_class="other"
                     /locus_tag="JQ356_001211"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(16344..16428)
                     /locus_tag="JQ356_001212"
     tRNA            complement(16344..16428)
                     /locus_tag="JQ356_001212"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16392..16394),aa:Tyr,seq:gta)
     gene            complement(16588..17430)
                     /gene="purU"
                     /locus_tag="JQ356_001213"
     CDS             complement(16588..17430)
                     /gene="purU"
                     /locus_tag="JQ356_001213"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HAY4621369.1"
                     /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVNHEGLSRNEHDQKMADAIDAYK
                     PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
                     TIIL"
     gene            complement(17480..17938)
                     /locus_tag="JQ356_001214"
     CDS             complement(17480..17938)
                     /locus_tag="JQ356_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HAY4621370.1"
                     /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
                     DADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
                     GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
     gene            18051..18956
                     /gene="rssA"
                     /locus_tag="JQ356_001215"
     CDS             18051..18956
                     /gene="rssA"
                     /locus_tag="JQ356_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HAY4621371.1"
                     /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
                     LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQCREIMPETEI
                     ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
                     PIPISLTRVLGADIVIAVDLQHDAHLIQQDLLSFNVSEENSENGESLPWHARLKERLG
                     SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
                     AAIAAGQLAVERKMDELLPLVRTNI"
     gene            19048..20061
                     /gene="rssB"
                     /locus_tag="JQ356_001216"
     CDS             19048..20061
                     /gene="rssB"
                     /locus_tag="JQ356_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HAY4621372.1"
                     /translation="MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDAL
                     ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDATVDNPAAAAKLLQEL
                     QPPVQQVISHCRVNYRQLVAADKPCLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
                     LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
                     LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
                     SAE"
     gene            20263..21171
                     /gene="galU"
                     /locus_tag="JQ356_001217"
     CDS             20263..21171
                     /gene="galU"
                     /locus_tag="JQ356_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HAY4621373.1"
                     /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGHSQIMVEQVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNTLGTEFKAWLEEEMGIKK"
     gene            complement(21314..21727)
                     /gene="hns"
                     /locus_tag="JQ356_001218"
     CDS             complement(21314..21727)
                     /gene="hns"
                     /locus_tag="JQ356_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HAY4621374.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
     gene            22332..22949
                     /gene="tdk"
                     /locus_tag="JQ356_001219"
     CDS             22332..22949
                     /gene="tdk"
                     /locus_tag="JQ356_001219"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HAY4621375.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE
                     VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
                     GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVGSLTAIQERHRHD"
     gene            complement(23231..24127)
                     /locus_tag="JQ356_001220"
                     /pseudo
     CDS             complement(23231..24127)
                     /locus_tag="JQ356_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904641.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
     gene            complement(24251..26926)
                     /gene="adhE"
                     /locus_tag="JQ356_001221"
                     /gene_synonym="adhC"
     CDS             complement(24251..26926)
                     /gene="adhE"
                     /locus_tag="JQ356_001221"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HAY4621376.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGILSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
                     KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
                     KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA"
     gene            27404..28051
                     /gene="ychE"
                     /locus_tag="JQ356_001222"
     CDS             27404..28051
                     /gene="ychE"
                     /locus_tag="JQ356_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YchE"
                     /protein_id="HAY4621377.1"
                     /translation="MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
                     KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
                     ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
BASE COUNT         6906 a         6761 c         7326 g         7125 t
ORIGIN      
        1 ctcaattcat cttcacttca tccctgaaat gtttgcaata aagagtacat tccggctttt
       61 caacagctgt tgcagtggtt tcgtgcaggt tgtggtacag gctcgcaatt ctgattaacg
      121 agctgtccag gtagtatgaa gaaatacaat aagcaggaat ttatcttatc tcccccgatt
      181 tccgtcatcg gaggagatat aactgtcagg caaatatcgt catcaaatag gcggcaaaca
      241 gtgccagatg cgctgcgcca ttgagcacgt tagtacgtcc ggtggagaag gagatatggc
      301 acagcactaa agaggccacc atcaccacca tttctggcgc accaagtgca aactgtaatt
      361 cgttacccgt cataaaggca attagcgtga cgacaggtac ggtaagtgaa atggttgcta
      421 acactgaacc aaagaacaga ttcatcgcgc gctggacctg gttgttcaac actgctttta
      481 acgcacctaa accttccggc gacagaatca acagagccac caggaagcca gtaaaggcga
      541 caggggcatt catgctgtcg agcaatgtct ccagcgggct ggcattcatt ttggtgactg
      601 caataacggc aatcagatgg ataatcaacc agatagcatg ccacacgctg ctatgggcag
      661 acggtttacc gtgatgcggg tcgtcgtcat cactgtcatc ttcgtgctcg tagacaaaca
      721 aactttgatg cgttttggtc tggatcagca aaaatacgcc atacattgcc gcagaaatta
      781 atgctaccag taacgcctga ccggttgaaa aattcgccgc aggcagagcc attggaaata
      841 ccagtacgat tatcgccagg gggaacagcg caattaaata ctgcttgata ccaaacagat
      901 tcatatattg ggtggcaaac ttacgaccgc ccaacaataa tgaaaagcca accagcccac
      961 cggtaacaat cataatgatt gaatagagcg tatcacgcat tagcgttggc gcggcgtcgc
     1021 cggttgccat taaagctgaa atcaaactga cttcaagaat aaccactgaa aggctaagaa
     1081 taagcgaacc gtaaggttct cccaggcgat gggctaatac gtccgcatga cggacaacac
     1141 taaaggcgct acttaaaata ccaataagcg caagaagatt gatggcaatg accactggta
     1201 gtgtctggct gcttccccac aggaacagca ctaccagcgc cagaaccggg aaaataagcg
     1261 aaatctcctt gtggcgggtt tttaccgcct cttgagcatt tgacattatg gttatccctt
     1321 tgcagatgaa tttatcgaaa atgtaaaaaa taggtaggaa aaataacaga aagtgtctgg
     1381 atatcggtaa cattttacga atttttaccc cactgtcgat tttttactca ttgggacata
     1441 aaaataagta ttacgtttag acaatgtttg ttttagcgtt tcttaagaac agtctgacat
     1501 gaaaattctt atgttttggc aagagtagat attgttgacc acacttaatg ttcaactttg
     1561 taaaaggagt caacgatgcc gtataaaacg aaaagcgatc tgccggaaag cgtaaagcac
     1621 gttctaccgt ctcatgccca ggatatctat aaagaagcgt tcaacagcgc atgggatcaa
     1681 tataaagata aagacgatcg gcgtgatgac gccagtcgcg aagaaaccgc gcataaagtg
     1741 gcctgggctg ctgtgaagca tgaatatgcc aaaggggatg atgataaatg gcataaaaaa
     1801 tcgtaaaacc ggtagcttag ttaaagctat tcgtgcggtg ttgccttgca agtggtccgt
     1861 ggattgcata ttgtcccgtt agtggtttca aaatgagcag taaaaatgtc cggaagacac
     1921 caaaaagttg tcgcagggaa gtatgcagtg gcggaggtgt aaggtgataa cgcgtgattt
     1981 cttgatgaat gccgattgta aaacggcatt tggtgccatt gaagaatcac tcttatggtc
     2041 agcagagcaa cgagcggctt cgctggcggc gacgctggct tgtcgacctg atgagggacc
     2101 ggtgtggatc ttcggttatg gatcgttgat gtggaatccg gcactggagt ttaccgagtc
     2161 gtgcaccggt acactggttg gatggcatcg cgcgttttgc ctgcgcctga ccgccgggcg
     2221 cgggactgcg caccagccgg gacggatgct tgcactgaaa gagggcggac gcactacagg
     2281 cgtcgcctat cgactgccag aagagacgct ggagcaggaa ctaaccctgt tgtggaagcg
     2341 cgagatgatt accggctgtt atctgccaac ctggtgtcag cttgatcttg atgatggatg
     2401 cacagtaaac gccattgtgt ttattatgga cccgcgacat ccagaatatg aatctgacac
     2461 tcgcgctcag gtcatcgcgc cgttgattgc ggcggcgagc ggtccgctgg gaaccaacgc
     2521 acaatacctg ttttcactgg aacaggagct tatcaaactg ggaatgcagg acgatgggct
     2581 gaatgatttg ctggtatcgg taaaaaaact gctggcggag aattatccgg atggtgtgtt
     2641 acggccggga ttcgcctgag taaacttccc gcatagtggg gcgtcagacg ccccctcaaa
     2701 cattaaaatg tgagcacttt atcggctgac agcgtccatt gcgccagttc cacaagagta
     2761 ccgatttcca ccccatcaat cagaggaagt gtactaatcc cgcgcccgtc ggtacaggtt
     2821 ttgcacaatt tcaccggtac attctgagcg gtaaggatct ccagcatttg ctgaatgttg
     2881 tagccttccc ctggtttttg cccgcgcaac ccggctgtga ccgcatcaga catgaggaac
     2941 agacgcagat ccagattgct ctcctgctct cgtaacgcaa tggccagccg caagctgtta
     3001 aacaaggatt cgctcccgta aggtgcgcca ttggcaacga tcacgatttt ttgcattatt
     3061 tactcctgta ttcagggaat tagacactca tcttctatct tactgcttct gcagcgtctg
     3121 accaatcggt cacattttta aggattttcc tgaaagcgcg agaaaatacg acaaaagttg
     3181 ccagtaatcg ttattcttta aggctatggt tttcattatt accggaagtt accgacgttt
     3241 tgagccgttt cgttcctcgc attatcccgt tttatttact cttgcttgta gcaggcggta
     3301 cagctaacgc acaatctacc ttcgagcaaa aagcggcaaa tccctttgat aataacaatg
     3361 atggtctgcc ggatttaggc atggctcccg aaaatcatga tggggaaaaa cactttgctg
     3421 aaattgtgaa agatttcggc gaaaccagta tgaatgataa cgggctggat actggcgagc
     3481 aggcaaaagc tttcgcattg ggaaaagtcc gcgacgcgct tagtcaacag gttaatcagc
     3541 acgtagagtc ctggctatca ccgtggggaa atgccagtgt tgacgtcaaa gtggataacg
     3601 aaggacattt caccggcagt cgtggaagct ggtttgtgcc gttacaagat aatgatcgtt
     3661 atttcacctg gagccagctt ggtcttactc agcaggataa tgggttggtg agcaatgtgg
     3721 gcgttgggca acgctgggcg cgcggcaact ggctggtggg ttataacact ttttatgaca
     3781 acttgctgga cgaaaatctt cagcgagcgg gctttggtgc cgaagcgtgg ggcgaatatt
     3841 tgcgattatt ggcaaacttt tatcagccgt ttgctgcatg gcatgaacag acagccacgc
     3901 aggaacaacg gatggcgcgc gggtacgacc tgacagctcg gatgcgcatg ccgttctatc
     3961 aacacctcaa taccagtgtc agcctagaac agtattttgg tgatcgtgtt gatttgttta
     4021 actctggtac gggttatcac aatcccgtcg cgttgagtct gggattaaat tacacccctg
     4081 tgccattagt cactgtgacg gcccagcata aacagggtga aagtggcgag aatcaaaata
     4141 acctcgggct gaatcttaat taccgctttg gtgtaccgct caaaaaacaa ctttctgcgg
     4201 gcgaggttgc cgaaagtcag tcgttacgtg gtagtcgcta tgacaatccg cagcgaaata
     4261 atctaccgac tcttgagtac cgacagcgaa aaacgttaac ggtgtttctg gcgacaccgc
     4321 cgtgggatct aaaacctggc gaaacagtgc cgctgaaatt acaaatccgc agtcgttacg
     4381 gtattcggca actgatttgg cagggcgata cgcagatatt aagtttgacg ccgggcgcac
     4441 aagccaacag cgcggagggc tggacgctga tcatgcctga ctggcagaac ggggaagggg
     4501 caagcaatca ctggcgattg tcggtggtgg tggaatataa ccaggggcag cgtgtctcct
     4561 ccaatgagat cacgctaacg cttgtcgaac cgttcgatgc attgtcaaac gacgaactgc
     4621 gctgggaacc gtaatcagaa aatgcgctcc tgatgcaccc ataccgctgc ttccacgcga
     4681 gacttgagct tcattttctt cagcatgtgc ttgacgtgca cttttactgt gctttcggtg
     4741 atatccaggc ggcgggcaat catcttgttc ggcaaaccct gggcaatcag cttgagaata
     4801 tcgcgctcgc gtggggttaa ctggttaaca tcgcgctcag tagtggcacg gttagcgcgc
     4861 aagctggcgg ccagaacagg cgttaatgct tcgcttaata ccatttcgcc agcagctgcc
     4921 tgatgcaatg ctttcagcag atcttccggt tccatatctt ttaacagata accatccgcg
     4981 ccgcgtttca gtgcggtgac cacatcttct tcatggttag agacgctgaa taccacaatg
     5041 cgccctgaga gggacttttc gcgcagttta tccagcgttt ccagaccgtt catgccgggc
     5101 atattgagat ctaacaggat cagatcggga tcaagagact ccgccagttc aataccctgt
     5161 tcgccattac tcgcttcgcc aaccacggtg atatctggtg ccatactgat aagctgtttt
     5221 acgccagttc gcagcatcgg gtgatcgtcg atcagcagga tagtagccgg ttcctgatta
     5281 ctcatgggta tctccttgga cgtctgtgaa agttttttcg ggaataaagg tgaccaccac
     5341 ttcggtgcca cctgattcac gacggcggac gcggcaatcg cctcgtaaac tttgcgcacg
     5401 gtcgcgcatt attatcatgc cgtagtgatt gctgcggatg gcattttcag gcacgccgca
     5461 gccgttatct tggacggtca gtttgacctg attatcgttt tgcgccaccg tcaccacgac
     5521 ctcactcgct tgcgaatgtt tgagggcgtt acttaatgcc tcacgggcaa tttgcaacaa
     5581 gtggattgcc tgatgtgaag gcaccagacg aggcggcaat tgataatcca gcttcaccgg
     5641 gaagccaaat ttggcgctgt actcttcgca actcgcctcc agcgccggac gtaatccagg
     5701 ctcggtgagc tgcaagcgga atgtggtgag caattcacgc aactgcgccc aggatgcatt
     5761 cagttcgtta cggatctgac ttaacagttc gcggctgctt gctggcagcg catcgccctg
     5821 catctgtaaa caactcacct gcatcttcat gcaagagaga gattgggcaa tagaatcatg
     5881 cagttcgcgc gcaatggtgg cacgctcttc catcacgatc aactgttgct gacgttcctg
     5941 atggcgatcc agcgccagcg tggcggtgag ttgttcaacc agggtatcca ccagttgttg
     6001 ttgatcatgg ctaagatgac gcccctgcgg cagggtcgcc agcaaaatac cgtactgcgt
     6061 atgagagtca gccagccgcc acttcagggt tgtgccgcga tcaccaacgg gtaatacgcc
     6121 gcgcgggcag agctggcagc ctttatcatc acaagtcata tctggctggc aggtaaactc
     6181 ctgatgattc tcttcatcat cagtgtcata cacccgcagt tcgatatcac gtagcagggt
     6241 taaattctgt aagccgttga gtacaggtga caggcgttca cacagcgggg cgcgggaatg
     6301 caaacggcgg ttagcctgcc ataaaaaaga gaggatctga tttttatgct ccagcccggc
     6361 ggttttctcc tgaacccgct gctcaagtac ggcataactt tcggccagtt ctgcagacat
     6421 attgttcaat gcagttccaa gcatcgccat ttcgttgcgc ccgctgatgt tcgcgcgttg
     6481 ggtaaaatcg cgatgactga cggcactcgc cattgccagc agttgccgcc acggttgtag
     6541 cagtcgcacc cgcaaccaga taatagtgaa caccagtaaa agtgccataa ataccgccat
     6601 tacccgatgg accagtacca ctgtctcaat gcgcatttcc gtggtgcggt caaaaccaga
     6661 taccagctga tcaagcccgg caacaaactg gctgacatcc gctgacaccg tttcgcggtt
     6721 ttgtgcacgc atcagtgcag ggatcagttc attacgccag taatcttgta aaccctgtaa
     6781 ttgcgccagt tgttcgtctc gttctgctgc tcgagttaac tcggcgctaa atgccgtttg
     6841 ttccatctct ttaattaagg gcttgtcttt ctcacttaat ggcactgccg ccaacagacg
     6901 gtaactttgc atgcgcagcg atcccgcttt gttgatcgca tgggcgctgc cctgaacgcc
     6961 ttgcaccagc cagccagaaa ccgccatccc tgccagtcca atagcagtag aaagcaacac
     7021 aataagcgca acctgattaa ccagggtgag cggagagaga caacgtttaa gcatgtaaac
     7081 ctcttccttc aggctttaaa tgagcaataa ccttaatgaa tgtgacgata cattctggaa
     7141 tggcagtatt ctcggctatt ggctgaagta tacccatacc cggaaagagt tactccttat
     7201 ttgccgtgtg gttagtcgct ttacatcggt aagggtaggg attttacagc accgtgaaaa
     7261 atctcataat ttttatgaaa tcactgtact cactatgggt aatgataaat atcaatgata
     7321 gataaagtta tcttatcgtt tgatttacat caaattgcct ttagctacag acactaaggt
     7381 ggcagacatc gaaacgagta tcagaggtgt ctatgagtca ctcatccgcc cccgaaaggg
     7441 ctactggagc tgtcattaca gattggcgac cggaagatcc tgcgttctgg caacaacgcg
     7501 gtcaacgtat tgccagccgt aacctgtgga tttccgttcc ctgtctgctg ctggcgtttt
     7561 gcgtatggat gttgttcagc gctgttgcgg tgaacttacc gaaagtcggt tttaatttta
     7621 cgaccgatca gctatttatg ttgactgcgc tgccttcggt ttctggcgcg ttattacgtg
     7681 ttccatactc ctttatggtt cctatcttcg gtggtcgtcg ctggacggcg ttcagcaccg
     7741 gtattctgat tattccttgc gtctggctgg gttttgccgt gcaggatacc tccacgcctt
     7801 atagcgtctt catcatcatc tctctgctat gcggctttgc tggcgcgaac ttcgcatcca
     7861 gtatggcaaa catcagcttc ttctttccga aacagaagca gggtggcgcg ctgggtctga
     7921 atggtggtct gggaaacatg ggcgtcagcg tcatgcagtt ggttgctccg ctggtggtat
     7981 cactgtcgat tttcgcagta tttggtagcc agggcgtcaa acagccggat gggactgagc
     8041 tgtatctggc gaatgcgtcc tggatatggg tgccgttcct tgccatcttc accattgcgg
     8101 cgtggtttgg catgaacgat cttgctacct cgaaagcctc catcaaggag cagttgccgg
     8161 tactcaaacg gggtcatctg tggattatga gcctgctgta tctggcaacc ttcggctcct
     8221 tcatcggctt ctccgcgggc tttgcaatgc tgtcaaaaac gcagttcccg gatgttcaga
     8281 ttctgcaata cgctttcttc gggccgttta ttggtgcgct ggcgcgttct gcaggtggtg
     8341 cattatctga ccgtctgggc ggaactcgtg tcacgctggt gaactttatt ctgatggcga
     8401 ttttcagcgg cctgctgttc ctgaccttac cgactgacgg gcagggcgga agcttcatgg
     8461 cgttcttcgc ggtcttcctg gcgctgttcc tgacagctgg gctgggtagt ggttccactt
     8521 tccagatgat ttcagtgatc ttccgtaaac tgacaatgga tcgcgtgaaa gcagaagggg
     8581 gttctgacga acgtgcgatg cgtgaagcgg caaccgacac ggcggcggcg ctgggtttca
     8641 tctctgcgat tggcgcgatt ggtggcttct ttatcccgaa agcgtttggt agctcgctgg
     8701 cattaacggg ttcgccagtc ggcgcaatga aggtattttt gattttctat atcgcctgcg
     8761 tagtgattac ctgggcggta tatggtcggc attctaaaaa ataaaccgtt actcgtcata
     8821 ctccgggtta catgtgctgc ggctgcgttc attcacccca gtcacttact ttagtaagct
     8881 cctgggattc attcacttgc cgccttcctg taaaccgaat tatatagagt aaaatatttg
     8941 attatccttt gcgcggcatg atgtcgcgct ttttttaagc gttatttagt tacaacatac
     9001 taatgttata tggtttattt cgccggattt cattaagagc cattaatatg ttacccatgg
     9061 ggaatactcc ttaataccca tctgcataaa aatcttaata gtttaaataa ctacaggtat
     9121 aaaacgtctt aatttacagt ctgttatgtg gtggctgttg attatcctaa aggggtatct
     9181 taggaattta ctttattttt catccccatc actcttgatc gttatcaatt cccacgctgt
     9241 ttcagagcgt taccttgccc ttaaacatta gcaatgtcga tttatcagag ggccgacagg
     9301 ctcccacagg agaaaaccga tgagtaaatt cctggaccgg tttcgctact tcaaacagaa
     9361 gggtgaaacc tttgccgatg ggcatggcca gcttctcaat accaaccgtg actgggagga
     9421 tggatatcgc cagcgttggc agcatgacaa aatcgtccgc tctacccacg gggtaaactg
     9481 caccggctcc tgcagctgga aaatctacgt caaaaacggt ctggtcacct gggaaaccca
     9541 gcagactgac tatccgcgta cccgtccgga tctgccaaac catgaacctc gcggctgccc
     9601 gcgcggtgcc agctactcct ggtatcttta cagtgccaac cgcctgaaat acccgatgat
     9661 gcgcaaacgc ctgatgaaaa tgtggcgtga agcgaaggcg ctgcatagcg atccggttga
     9721 ggcatgggct tctatcattg aagacgccga taaagcgaaa agctttaagc aggcgcgtgg
     9781 acgcggtgga tttgttcgtt cttcctggca ggaggtgaac gaactgatcg ccgcatctaa
     9841 cgtttacacc atcaaaaact acggcccgga ccgtgttgct ggtttctcgc caattccggc
     9901 aatgtcgatg gtttcttacg catcgggtgc acgctatctc tcgctgattg gcggtacttg
     9961 cttaagcttc tacgactggt actgcgacct gcctcctgcg tctccgcaaa cctggggcga
    10021 gcaaactgac gtaccggaat ctgctgactg gtataactcc agctacatca tcgcctgggg
    10081 ttcaaacgtg ccgcagacgc gtaccccgga tgctcacttc tttactgaag tgcgttacaa
    10141 aggcaccaaa actgttgccg tcacaccaga ctacgctgaa atcgccaaac tgtgcgatct
    10201 gtggctggca ccgaaacagg gcaccgatgc ggcaatggcg ctggcgatgg gccacgtaat
    10261 gctgcgtgaa ttccacctcg acaacccaag ccagtatttc accgactatg tgcgtcgcta
    10321 caccgacatg ccgatgctgg tgatgctgga agaacgcgac ggttactacg ctgcaggtcg
    10381 tatgctgcgc gctgctgatc tggttgatgc gctgggccag gaaaacaatc cggaatggaa
    10441 aactgtcgcc tttaatacca atggcgaaat ggttgcgccg aacggttcta ttggcttccg
    10501 ctggggcgag aagggcaaat ggaatcttga gcagcgcgac ggcaaaactg gcgaagaaac
    10561 cgagctgcaa ctgagcctgc tgggtagcca agatgagatc gctgaggtag gcttcccgta
    10621 ctttggtggc gacggcacgg aacacttcaa caaagtggaa ctggaaaacg tgctgctgca
    10681 caaactgccg gtgaaacgcc tgcaactggc tgatggcagc accgccctgg tgaccaccgt
    10741 ttatgatctg acgctggcaa actacggtct ggaacgtggc ctgaacgacg ttaactgtgc
    10801 aaccagctat gacgatgtga aagcttatac cccggcctgg gccgagcaga ttaccggcgt
    10861 ttctcgcagc cagattattc gcatcgcccg tgaatttgcc gataacgctg ataaaacgca
    10921 cggtcgttcg atgattatcg tcggtgcggg gctgaaccac tggtatcacc tcgatatgaa
    10981 ctatcgtggt ctgatcaaca tgctgatttt ctgcggctgt gtcggtcaga gcgggggcgg
    11041 ctgggcgcac tatgtaggtc aggaaaaact gcgtccgcaa accggctggc agccgctggc
    11101 gtttgccctt gactggcagc gtccggcgcg tcacatgaac agcacttctt atttctataa
    11161 ccactccagc cagtggcgtt atgaaaccgt cacggcggaa gagttgctgt caccgatggc
    11221 ggacaaatcc cgctataccg gacacttgat cgactttaac gtccgtgcgg aacgcatggg
    11281 ctggctgccg tctgcaccgc agttaggcac taacccgctg actatcgctg gcgaagcgga
    11341 aaaagccggg atgaatccgg tggactatac ggtgaaatcc ctgaaagagg gttccatccg
    11401 ttttgcggca gaacaaccag aaaacggtaa aaaccacccg cgcaacctgt tcatctggcg
    11461 ttctaacctg ctcggttctt ccggtaaagg tcatgagttt atgctcaagt acctgctggg
    11521 gacggagcac ggtatccagg gtaaagatct ggggcaacag ggcggcgtga agccggaaga
    11581 agtggactgg caggacaatg gtctggaagg caagctggat ctggtggtta cgctggactt
    11641 ccgtctgtcg agcacctgtc tctattccga catcattttg ccgacggcga cctggtacga
    11701 aaaagacgac atgaatactt cggatatgca tccgtttatt cacccgctgt ctgcggcggt
    11761 cgatccggcc tgggaagcga aaagcgactg ggaaatctac aaagccatcg cgaagaaatt
    11821 ctccgaagtg tgcgtcggcc atctgggtaa agaaaccgac atcgtcacgc tgcctatcca
    11881 gcatgactct gccgctgaac tggcgcagcc gctggatgtg aaagactgga aaaaaggcga
    11941 gtgcgacctg atcccaggta aaaccgcgcc acacattatg gtcgtagagc gcgcttatcc
    12001 ggcgacttac gaacgcttta cctctatcgg cccgctgatg gagaaaatcg gtaatggcgg
    12061 taaagggatt gcctggaaca cccagagcga gatggatctg ctgcgtaagc tcaactacac
    12121 caaagcggaa ggtccggcga aaggccagcc gatgctgaac accgcaattg atgcggcaga
    12181 gatgatcctg acactggcac cggaaaccaa cggtcaggta gccgtgaaag cctgggctgc
    12241 cctgagcgaa tttaccggtc gtgaccatac gcatctggcg ctgaataaag aagacgagaa
    12301 gatccgcttc cgcgatattc aggcacagcc gcgcaaaatt atctccagcc cgacctggtc
    12361 tggtctggaa gatgaacacg tttcttacaa cgccggttac accaacgttc acgagctgat
    12421 cccatggcgt acgctctctg gtcgtcagca actgtatcag gatcaccagt ggatgcgtga
    12481 tttcggtgaa agcctgctgg tttatcgtcc gccgatcgac acccgttcgg tgaaagaagt
    12541 gataggccag aaatccaacg gcaacccgga aaaagcgctc aacttcctga cgccgcacca
    12601 gaagtggggg atccactcca cctacagcga caaccagttg atgctgacct taggtcgcgg
    12661 tggcccggtg gtctggctga gcgaagccga tgccaaagag ctgggcattg ccgataacga
    12721 ctggattgaa gtttacaaca gcaacggtgc gctgactgcc cgtgcggttg tcagccagcg
    12781 tgttccggca gggatgacca tgatgtacca cgcgcaggaa cgtatcgtta acctgccggg
    12841 ttcggaaatt actggccagc gtggggggat ccacaactcg gtcacccgta tcacgccgaa
    12901 accgacgcat atgattggtg gctatgccca tctggcatac ggctttaact actacggcac
    12961 cgtaggttct aaccgcgatg agtttgttgt agtgcgtaag atgaagaaca ttgactggtt
    13021 agatggcgaa ggcaatgact aggtacagga gagcgtaaaa tgaaaattcg ttcacaagtc
    13081 ggcatggtgc tgaatctcga taagtgcatc ggctgccaca cctgttcagt tacctgtaaa
    13141 aacgtctgga ccagccgtga aggcgtggag tacgcgtggt tcaacaacgt ggaaaccaag
    13201 ccgggtcagg gcttcccgac tgactgggaa aaccaggaaa aatacaaagg cggctggatc
    13261 cgtaaaatca acggcaaact gcagccgcgc atgggtaacc gtgccatgtt gctgggtaaa
    13321 atcttcgcta acccgcatct gccggggatc gacgattatt acgagccgtt cgattttgac
    13381 tatcagaacc tgcataccgc gccggaaggc agcaaatcgc agccgattgc ccgtccccgt
    13441 tcgctgatta ccggggaacg gatggcgaaa atcgaaaaag ggccgaactg ggaagatgac
    13501 ctgggtggtg agtttgacaa actggcgaaa gacaagaact tcgacaacat ccagaaggcg
    13561 atgtatagcc agttcgaaaa cacctttatg atgtatttgc cgcgcctgtg cgaacactgc
    13621 ctgaacccgg catgtgtggc gacctgcccg agcggtgcga tttacaagcg tgaagaagat
    13681 ggcatcgtcc tgatcgacca ggataaatgc cgtggctggc gtatgtgcat caccggatgc
    13741 ccgtacaaaa aaatctactt caactggaag agcggtaagt ctgagaagtg catcttctgc
    13801 tatccgcgta ttgaagcggg tcagccgacc gtgtgctcag aaacctgtgt cggtcgtatc
    13861 cgttatcttg gcgtgctgct gtacgatgcc gacgcgattg aacgtgcagc cagcaccgag
    13921 aacgagaaag atctttacca gcgtcagctg gaggtgttcc tcgatccgaa cgatccgaaa
    13981 gtcatcgagc aggcgattaa agacggtatt ccgctgagcg ttattgaagc cgcacagcag
    14041 tcgccggttt ataaaatggc aatggaatgg aaactggcgc tgccgctgca tccagaatat
    14101 cgcacactgc cgatggtctg gtacgtgccg cctctgtctc cgattcagtc tgcagcagac
    14161 gcgggtgagc tgggtagcaa cggcattctg ccagacgtcg aaagcttgcg tattccggta
    14221 cagtatctgg cgaatctgct gaccgccggt gataccaaac cggtactgcg cgcactgaaa
    14281 cgtatgctgg cgatgcgtca ttacaaacgt gctgaaaccg ttgacggtaa agttgatacc
    14341 cgtgcgctgg aagaggtcgg tctgaccgaa gcccaggcac aggagatgta ccgttatctg
    14401 gctattgcta actacgaaga tcgctttgtg gtgccgagta gtcatcgtga actggcacgg
    14461 gaagccttcc cggagaaaaa tggctgcggc tttacctttg gtgatggctg ccacggctca
    14521 gataccaaat tcaatctgtt caacagccgt cgtatcgatg ccatcgatgt gaccagcaaa
    14581 acggagccgc atccatgatc gaactcgtga ttgtatcgcg tctccttgaa tatccggatg
    14641 ctgccttatg gcagcatcaa caagagatgt ttgaggtgat tgctgcgtcg aaaaatctgt
    14701 cgaaagaaga tgcccatgcg ctgggcattt tcctgcgcga tttaacggcg atggatccgc
    14761 tcgatgccca ggcccagtac agcgaactgt tcgaccgtgg ccgcgccacg tcactgttgc
    14821 tatttgaaca tgttcacggt gaatcccgtg accgcggcca ggcgatggtg gacctgctgg
    14881 cgcagtacga gcagcacggc ttgcagttaa acagccgcga attaccggac catctgccgc
    14941 tgtatctgga gtacctgtcg cagctgccgc aaagcgaagc cgtggaaggt ttgaaagata
    15001 tcgcgccgat tctggcattg ctgagcgcgc gtctgcaaca gcgtgaaagc cgttatgccg
    15061 tgatgtttga tctgctgctg aaattggcca ataccgctat cgacagcgac aaagtggcgg
    15121 aaaaaattgc cgacgaagcg cgcgatgata cgccgcaggc gctggatgct gtctgggaag
    15181 aagagcaggt taaattcttt gctgacaaag gctgcggtga ttcagcaatc actgctcatc
    15241 agcgtcgctt tgccggtgcc gtcgcgccgc aatatctgaa tatcaccacc ggaggacagc
    15301 actaatgcaa ttcctgaata tgttcttctt tgatatctac ccgtacatag ccggggcggt
    15361 cttcctgatt ggtagctggc tgcgttatga ctacgggcag tacacctggc gcgcggcgtc
    15421 cagccagatg ctggatcgca aagggatgaa cctggcgtcg aacctgttcc atatcggtat
    15481 tctggggatt tttgctggtc acttcttcgg tatgctgacg ccgcactgga tgtatgaagc
    15541 ctggctgccg attgaagtga aacagaaaat ggcgatgttt gctggtggtg ccagcggcgt
    15601 gctgtgtctg attggcggcg tgctgttgct gaagcgtcgt ctgttcagcc cacgcgtgcg
    15661 tgcaaccact accggagcgg atatcctgat cctgtcgctg ctcgttatcc agtgcgcgct
    15721 gggcctgttg accattccgt tctccgctca gcatatggac ggtagcgaga tgatgaaact
    15781 ggttggctgg gcgcagtcgg tggtgacctt ccacggtggc gcttctcaac acctcgatgg
    15841 tgtggcgttt atcttccgtc tgcacctggt gctggggatg acgttattcc tgctgttccc
    15901 gttctcgcgt ctggtacaca tctggagcgt accggtggag tatctgacac gtaagtacca
    15961 gctggtgcgc gctcgtcact aaacgaattt tagttcacat agaccctgct tcggcggggt
    16021 tttttatggg cacggtgcgg ggtgagttgt cggatgcgct tcgcttatcc gacctacagg
    16081 ggaggatatt gtaggcccgg taaacgtggt gccatcgggc aaaattagct cggagtaaca
    16141 ggttttgatt attcaaggag gcgatggtgg tgggggaagg attactcagc gctgcgcgct
    16201 tcgcccttcg ggtcgttgcc tgcggcaacg ctctctcgct ggcgctcaag tcgaaccttg
    16261 gtcgaagctt ctcatccttc cccgcttggg cagaatattt aattgcggat tcgtttgaga
    16321 gtttacggac ttttgaaaag tgatggtggt gggggaagga ttcgaacctt cgaagtcgat
    16381 gacggcagat ttacagtctg ctccctttgg ccgctcggga accccaccac ggggtaatgc
    16441 tttttactgg cctgctccct tatcgggaag cggggcgcat catatcaaat gacgcgccgc
    16501 tgtaaagtgt tacgttgaga aaaatgaact ggttgcgtaa ttttcatccg taacggatta
    16561 aaggtaacca gttatttttg ctggcgatta aagaataatc gtccgattac cgtaaacaaa
    16621 gacgcgctgt gccagtactt tgtatagcgc acgacttaag acgtttttct cgacgtcacg
    16681 acctgcgcgc atcatatctt cagctgtgta ggtatgatcg acatgaataa cgtcctgcat
    16741 gatgattggg ccttcgtcca gattgtcatt cacatagtga gcggttgcgc caataatctt
    16801 cacaccacgt tcataggcct ggtgataagg acgtgcgccg ataaacgcag gcaggaatga
    16861 atggtgaata ttgatgattt tattcgggaa gcgtgccaca aattccggcg ttaatacccg
    16921 catatacttc gccagcacca catagtcagg tttataagca tcaatggcgt ctgccatctt
    16981 ttgatcgtgc tcgttgcggc ttaacccttc atggtttacc agctcaaacg gaatatcaaa
    17041 acgctcaacc agagaacgta aagtatcgtg gttaccaata actgccgcga tttcgacatc
    17101 caggccgccg taattggctt tcatcaacaa atcgccaagg caatgcgctt ctttagtgac
    17161 cagaatcact atccggcgac gaccggcagg attcagctca cgcacggagc cttctggcaa
    17221 tgcgctatcg agatccgcca gcagggtgga atcattaaaa atcccttcca gttccgtgcg
    17281 cataaaaaag cgcccggtac ggtgatcaac aaattcattg ttctgtacga tatttaactc
    17341 gtgcttgtag caaatattgg taatacgtgc gatcagacct ttttggtccg gacaaatagt
    17401 acgcagaact ttacgttgga gtgaatgcat tgctggaaaa accttgttga gagtgtttgc
    17461 taaaccgtac cgtcaaccat tattggccgc agcacttttt aaatttttta cctgaaccac
    17521 aagggcaggg atcgttgcga ccaaactgcg gacgtgtacc gtcaatatag taccattgac
    17581 cgttttcttt caaaaatcgc gaacgttcaa ttattgcacc tgttttgcca ccttcggtaa
    17641 atcgagcaac aaaactgaca aatccgatat tgtcggcgtc ctgccaacaa tgttcaaata
    17701 cggtcaatcc caaccattca gtatgcgcaa atccggccat caattcggca cgtaacgccg
    17761 ctgctccaca agagggatgc caggtcttta ttaaataatc tgcgtcttgc atcacaaaag
    17821 cgcagtaacg cgaacgcatg agatgttctg gatcaggtgc aaccttttca ccagacacat
    17881 aagggtggca acataggcta tactcgacag cactaccaca gggacaaagc tgagacacaa
    17941 ataatctccc tggaaacaat aacggcgtat taaccgcctg agtagcacta tgttaaccga
    18001 gcagtagcga tgtggctacg attgcattcc aggggaatct tgcgggaata atgagaaaga
    18061 taaaaatagg gctggcgctg ggatctggcg cggcgagagg ttggtcgcat attggcgtta
    18121 ttaatgcgct aaaaaaagtg ggtattgaaa ttgatatcgt tgcaggatgt tcaattggtt
    18181 cgctggtggg cgctgcctat gcatgcgatc gattatctgc gctggaagat tgggtgacct
    18241 ctttcagtta ttgggatgtt ttacgcctga tggatctctc ctggcagcgc ggtgggttac
    18301 tgcgcggcga gcgtgtcttc aatcaatgcc gcgaaataat gccggaaaca gagatcgaaa
    18361 attgttcccg tcgctttgcg gctgttgcca ccaatttaag tacgggacgt gaattatggt
    18421 ttactgaagg cgatctccat cttgctattc gcgcatcatg cagtattcca ggactcatgg
    18481 cacctgttgc acataacggc tactggctgg ttgatggagc agtagttaac ccaattccta
    18541 tttccctcac gcgtgtattg ggggctgata ttgtgatagc ggtcgacctg cagcacgatg
    18601 ctcatttgat acaacaagat ttgctctcct ttaatgtcag tgaagaaaat agcgagaatg
    18661 gtgaatcttt gccgtggcat gcgcgtctga aagaaaggtt aggcagtata acaacacgtc
    18721 gggcggtgac agcgccaacg gcaacagaga ttatgaccac ttctatccag gtgctggaga
    18781 accgccttaa aaggaaccgc atggcaggtg atccgcccga tattctgatt caacctgttt
    18841 gcccgcaaat atctacgctt gatttccatc gcgcgcacgc tgccattgcg gccggacagc
    18901 tggcagtgga aaggaaaatg gacgaacttt tgccgttggt acgcaccaac atttgaccag
    18961 aatttttatc tacacttaag ttaattctga caggcgcagg tggcaatagc atgccactat
    19021 tgagtaaagc cagtcagggg agagaacatg acgcagccat tggtcggaaa acagattctc
    19081 attgttgaag atgagcaggt atttcgctcg cttctggatt catggttttc ctcattggga
    19141 gcgacaacgg tactggcggc tgatggggtg gatgcccttg agttgctggg aggtttcact
    19201 ccagacctga tgatatgtga tatcgcgatg ccacgaatga acgggcttaa actgctggag
    19261 catatacgta acagaggcga ccagacccca gttctggtga tatctgccac tgaaaatatg
    19321 gcagatattg ccaaagcgtt acgtctgggc gttgaagatg ttttgctgaa accagttaaa
    19381 gatctgaatc gcttgcgcga gatggttttt gcctgtctct atcccagcat gtttaattcg
    19441 cgcgttgagg aagaggaaag gctttttcgc gattgggatg caacggttga taaccctgcc
    19501 gcagcggcga aattattaca ggaactacaa ccgccggttc agcaggtgat ttcccattgc
    19561 cgggttaatt atcgtcaatt ggttgccgcg gacaaaccct gcctggtgct tgatattgcc
    19621 gcactttcgg aaaacgatct ggcattttat tgccttgatg tcacccgagc tggacataat
    19681 ggcgtacttg ctgccttgtt attacgcgca ttgtttaacg gattattaca ggaacagctt
    19741 gcacaccaaa atcaacggtt gccagagctg ggcgcgttat tgaagcaggt aaaccattta
    19801 ctccgtcagg ccaatctgcc ggggcagttt ccgctattag ttggctatta tcatcgcgaa
    19861 ctgaaaaatc tcattctggt ttctgcgggt ctgaatgcga cgttaaatac cggcgaacac
    19921 caggtgcaaa tcagtaatgg tgttccgtta ggcactttag gtaacgctta tttgaatcaa
    19981 ttgagccagc gatgcgatgc ctggcaatgc caaatatggg gaaccggtgg tcgactgcgc
    20041 ttgatgttgt ctgcagaatg agcaaacgat aacgcggact aaatttgcat tacctgctaa
    20101 tgtcggctgg tggtactatc gtcgccattc gtataagtaa ttgtcttaat tatgctaact
    20161 cgcctccttt tcagaactta gccccttcgg ggtgctgata tactgggatg cgatacagaa
    20221 atatgaacac gttcaaaaca cgaacagtcc aggagaattt aaatggctgc cattaatacg
    20281 aaagtcaaaa aagccgttat ccccgttgcg ggattaggaa ccaggatgtt gccggcgacg
    20341 aaagccatcc cgaaagagat gctgccactt gtcgataagc cattaattca atacgtcgtg
    20401 aatgaatgta ttgcggctgg cattactgaa attgtgctgg ttacgcactc atctaaaaac
    20461 tcgattgaaa accactttga taccagtttt gaactggaag caatgctgga aaaacgtgta
    20521 aaacgtcaac tgcttgatga agtgcagtct atttgtccgc cgcacgtgac tattatgcaa
    20581 gttcgtcagg ggctggcgaa aggcctggga cacgcggtat tgtgtgctca cccggtagtg
    20641 ggtgatgaac cggtagctgt tattttgcct gatgttattc tggatgaata tgaatccgat
    20701 ttgtcacagg ataacctggc agagatgatc cgccgctttg atgaaacggg tcatagccag
    20761 atcatggttg aacaggttgc tgatgtgacc gcatatggcg ttgtggattg caaaggcgtt
    20821 gaattagcgc cgggtgaaag tgtaccgatg gttggtgtgg tagaaaaacc gaaagcggat
    20881 gttgcgccgt ctaatctcgc tattgtgggt cgttacgtac ttagcgcgga tatttggccg
    20941 ttgctggcaa aaacccctcc gggagctggt gatgaaattc agctcaccga cgcaattgat
    21001 atgctgatcg aaaaagaaac ggtggaagcc tatcatatga aagggaagag ccatgactgc
    21061 ggtaataaat taggttacat gcaggccttc gttgaatacg gtattcgtca taacaccctt
    21121 ggcacggaat ttaaagcctg gcttgaagaa gagatgggca ttaagaagta acatccatat
    21181 cggtgttatc cacgaaacgg cgttgaacaa tcgacgccgt tttttatagc ttattcttat
    21241 taaattgtct taaaccggac aataaaaaat cccgccgatg gcgggatttt tagcaattgc
    21301 aatctacaaa agattattgc ttgatcagga aatcgtcgag ggatttacct tgctcatcca
    21361 ttgctttttt gattacagct ggagtacggc cctggccagt ccaggtttta gtttcgccgt
    21421 tttcgtcaac atagctatat tttgccggac gctgagcacg tttagctttg gtgccggatt
    21481 taacggcagc aaggctattc agcagttcgt tcgggtcaat accgtcagcg atcagcattt
    21541 cgcgatattg ctgcagttta cgagtgcgct cttcaacttc agcagcagcc gcgctttctt
    21601 cttcgcgacg ttcgttaaca acaacttcta atttttccag catttcttcc agcgtttcaa
    21661 gtgtacattc tcttgcctgc gcacgaagag tacggatgtt gttcagaatt ttaagtgctt
    21721 cgctcattgt agtaatctca aacttatatt ggggtggttt gttgaggtaa taatagagcc
    21781 ttaaattcag ttgtgcaata gccaggaatg taaggaattc aaaattgttc tttattttgt
    21841 gccgccaata aatatctttt cataaaatta gccagaaaag acgcggcata tagccctatt
    21901 tacaccgatg atttcgcagc acgtgaggtt aaaacttcct gattcatgtc acattttatg
    21961 gggagattat cgtaggctga cggcctttca gtcttctgta ttagttgtgt ttacgagaat
    22021 tccctattaa gcgaatgatg aaaagtagaa cagtcgcaat aagagcatgg acttagtatt
    22081 gcactatctc ctggaggtca acagagggct attacttgcg caacaggtta aagattgtga
    22141 atagttacca gcagtcattt acccgcttat aacaagcgag gcagttgtaa tgatagctca
    22201 gaaggattat gcaaggcttc gtaagggaga acgcatatac ccacttctgt gcatactgtt
    22261 gagctgaaaa actgacgaat tatgataaac tccagccaac tttatttcat atcattgagg
    22321 gcctgtggct gatggcacag ctatatttct actattccgc aatgaatgcg ggtaagtcta
    22381 cagcattgtt gcaatcttca tacaattacc aagaacgcgg catgcgcact gtcgtatata
    22441 cggcagaaat tgatgatcgc tttggtgccg ggaaagtcag ttcgcgtata ggtttgtcat
    22501 cgcctgcaaa attatttaac caaaattcat cattatttga tgagattcgt gcggaacatg
    22561 aacagcaggc aattcattgc gtactggttg atgaatgcca gtttttaacc agacaacaag
    22621 tatatgaatt atcggaggtt gtcgatcaac tcgatatacc cgtactttgt tatggtttac
    22681 gtaccgattt tcgaggtgaa ttatttattg gcagccaata cttactggca tggtccgaca
    22741 aactggttga attaaaaacc atctgttttt gtggccgtaa agcaagcatg gtgctgcgtc
    22801 ttgatcaagc aggcagacct tataacgaag gtgagcaggt ggtaattggt ggtaatgaac
    22861 gatacgtttc tgtatgccgt aaacactata aagaggcgtt acaagtcggc tcattaacgg
    22921 ctattcagga aaggcatcgc cacgattaat aagaatttct ttactgacag ggtgagcagg
    22981 gcacttttat cctgtcagtt cgttttacgc acttcttccg ggctatatac ccttctcggc
    23041 agttttttaa cgccgctata cgcctcacag ggctcttaag caccgacgtt gacttgtgac
    23101 ctgtaaagta caatatccct gtgtttaggc gttatacatc gtcgcaaata tgatgaaggc
    23161 taatgctgtc ggtttatgga aaagttgctt tgggtaaaca aaaaatacgg ccccagaagg
    23221 gcaatgccgt tcacttaaga ggagcggcac tatgtttcac aggataacgg gtttttgata
    23281 tcttaaccga cctcggcctt gatggtcggg ggcgttttgt tatgaacacc acttccagag
    23341 caccccgaag atgctccagt cgtttcggga tggtccctgg tgacgccgtg tttcccagct
    23401 ctatcatttc tgatgcgata ttcttccacg caggcagtag ccagtggcgg ttacaaccct
    23461 tctggttcag cgttagcagc aggtcttcgc tgtaaaaaag cttatcaaac aacgtaatag
    23521 agttatccgg gatggtggcg agcatggagt gggccagcac agtttcgctc tgccggtaag
    23581 gtgcggtcac ggcattcagc agaatgtgac ttcccaggtt cattaaggcc accagacgca
    23641 taaccgggta ggcgttctgc cgcttagtgg atgtgttggc agacccataa tattcacgca
    23701 gctcgggttt atcaggtgtc ctgaactgtg cgccatcaat ggcaaaaagt tgcaggccgt
    23761 gccagtcatc cttcaggtaa cgttccgcgc ccctgtctgt gcggtctggc ggaagagcca
    23821 ttccactggg gcggccccca cgcgctgacg cgcttgggtg acagcgctgc gggccagcag
    23881 gttcatcccc gcttcgccat ccgcgctcag gttcagacgg cgaacaacat cggtaattgg
    23941 ctcattgcac caccatccag ataaccatgt cccccggtaa acgacggcgg cgaacggtcg
    24001 catgagcaga aagcgtcagg cagtgttgta tccactcggt gggaaggtgt tctgcaaata
    24061 gttgtgcaga gggcggaggc ataagcggat ggtcactgaa atcgagcaga tcattgagaa
    24121 gtggcataag aaaacggctc cctgttgtgg aagccgttat agtgcctcag tttaaggatc
    24181 ggtcaactaa tccttaactg atcggcattg cccagaaggg gccgtttatg ttgccagaca
    24241 gcgctactga ttaagcggat tttttcgctt ttttctcagc tttagccgga gcagcttctt
    24301 tcttcgctgc agtttcacct tctacataat cacgaccgta gtaggtatcc agcagaatct
    24361 gtttcagctc ggagatcagc gggtaacgcg ggttagcgcc ggtgcactgg tcatcgaatg
    24421 catcttcaga cagtttatcc acgttcgcca ggaagtctgc ttcctgaacg ccagcttcac
    24481 ggatagattt cggaataccc agttcagctt tcagcgtttc cagccatgcc agcagtttct
    24541 cgatcttagc agcagtacgg tcgcccggtg cgctcagacc caggtggtca gcaatttcag
    24601 cataacgacg gcgagcctgc ggacggtcat actggctgaa tgcagtctgc ttggtcgggt
    24661 tgtcgttcgc gttgtagcga ataacgttac aaatcagcag ggcgtttgcc agaccgtgcg
    24721 gaatatggaa ctgggaaccc agtttgtgcg ccattgagtg acatacaccc aggaaggcgt
    24781 tcgcaaacgc gatacccgcg atagtcgctg cactgtgaac acgttcacgc gctaccggat
    24841 ttttagaccc ttcgtggtag gacgctggca gatattcttt cagcagtttc agtgcctgca
    24901 gagcctgacc atcagagaac tcagatgcca gtacagaaac ataagcttcc atggcgtgag
    24961 ttactgcgtc cagaccaccg aaagcacaca gggacttcgg catgtccata accaggttgg
    25021 cgtcgacaat cgccatatcc ggagtcagcg catagtctgc cagcggatat ttctgaccag
    25081 tagcgtcgtc agttacaacc gcaaacggag tgacttcaga acctgtacca gaagtggtgg
    25141 tgacagcgat cattttcgct ttcacgccca ttttcgggaa cttgtagata cgtttacgga
    25201 tatccataaa gcgcagcgcc agctcttcga agtgagtttc cggatgttcg tacataaccc
    25261 acatgatctt cgcggcgtcc atcggggaac caccacccag cgcgataatc acgtctggtt
    25321 tgaaggagtt tgccagttct gcacctttac gaacgatgct cagggtcggg tccgcttcta
    25381 cttcgaagaa gacttcagtt tcaacgcctg ctgctttcag tacggaagtg atctgatcag
    25441 cataaccatt gttgaacagg aagcggtcag tcacgatgag cgcacgtttg tggccatcag
    25501 taatcacttc atccagcgcg attggcaggg agccacggcg gaagtagata gatttcggaa
    25561 gtttgtgcca caacatgttt tcagctcgct tagcaacggt tttcttgttg atcaggtgtt
    25621 tcggaccaac gttttcagag atggagttac caccccaaga accacaaccc agagtcaggg
    25681 aaggtgcgag tttgaagtta tacaggtcac cgataccacc ctgagacgct ggggtgttaa
    25741 tcaggatacg agccgttttc attttctgac cgaagtaaga aacgcgagcc ggttggttat
    25801 cctggtcagt gtacaggcaa gaggtatgac cgataccgcc catagcaacc agtttctctg
    25861 ctttttctac cgcgtcttcg aaatctttag cgcggtacat tgccagagtc ggggacagtt
    25921 tttcatgtgc gaacggttcg ctttcatcaa caacggtcac ttcaccgatc agaatcttgg
    25981 tgttttctgg tacagagaag cctgccagtt cagcaatttt ataggctggc tgaccaacga
    26041 tagccgcgtt cagcgcaccg tttttcagga taacatcctg aacagctttc agctctttac
    26101 cctgcaacag atagccgccg tgggttgcaa aacgttcacg tacagcgtca taaacagagt
    26161 caacaacaac aacagactgt tcagaagcac agattacgcc gttgtcgaag gttttggaca
    26221 tcagtacaga tgcaactgca cgtttgatat cagcagtttc atcgataaca actggagtgt
    26281 tgcccgcgcc tacaccgata gctggtttac cggagctgta tgcggcttta accatgcccg
    26341 gaccaccagt cgcgaggatc aggttgatgt ctgggtggtg catcagtgcg ttagacagtt
    26401 caacagaagg ttgatcgatc cagccgatca gatctttcgg agcaccggca gcgatagcag
    26461 cctgcagaac gatatcagcc gctttgttgg tggcatcttt tgcacgcggg tgcggggaga
    26521 agataatggc gttacgggtc ttcagactga tcagcgattt gaagatagca gttgaagtcg
    26581 ggttagtggt cggaacgata ccgcaaataa taccgattgg ttcagcgata gtgatggtac
    26641 caaaagtgtc gtcttcagac agaataccac aggttttttc atctttatag gcgttgtaga
    26701 tatattcaga agcaaagtgg tttttgatca ctttatcttc gacgataccc atgccggatt
    26761 cggcaacggc cattttcgcg agtgggattc gagcatctgc agcagccaga gcggcggcgc
    26821 ggaagatttt gtctacttgc tcttgagtga aactggcata ttcacgctgg gctttcttta
    26881 cacgctctac gagtgcgtta agttcagcga cattagtaac agccataatg ctctcctgat
    26941 aatgttaaac ttttttagta aatcatctgc tcgaatacga gagtatagtc agtgcggtga
    27001 tgatttgctt aacctatgaa aatcaaaagc ttactcgcgc tcacactcac tgtgatttac
    27061 taaaagagtt taaacattag agttattatc tctaatgcgt cacttccagg tggcgtaagc
    27121 aagattactc acttctgggt actgattacg tgatccaaat caaatttttt gcaaagctga
    27181 cacctttcag catcgctttt cgccattata gctaacagtt aataaattgt agtatgattt
    27241 ggtggctaca ttagcatgtt ttgcacaact agataacaat aacgaatgat agcaatttta
    27301 agtagttagg aggtgaaaaa tgctgtcaaa aggcgtattg tcagcgcgtc ttttcaacct
    27361 tatttatggc taacattatc cggcttttgc ttcggagcta accgtgattc agaccttttt
    27421 tgattttccc gtttacttca aatttttcat cgggttattt gcgctggtca acccggtagg
    27481 gattattccc gtctttatca gcatgaccag ttatcagaca gcggcagcgc gaaacaaaac
    27541 taaccttaca gccaacctgt ctgtggccat tatcttgtgg atctcgcttt ttctcggcga
    27601 cacgattctg caactttttg gtatatcaat tgattcgttc cgtatcgccg ggggcatcct
    27661 ggtggtgacg atagcgatgt cgatgatcag cggcaagctt ggcgaggata aacagaacaa
    27721 gcaagaaaaa tcagaaaccg cggtacgtga aagcattggt gtggtgccat tggcgttgcc
    27781 gttgatggcg gggccagggg cgatcagttc taccatcgtc tggggtacgc gttatcacag
    27841 cattagctat ctgtttggtt tctttgtggc tattgcattg ttcgctttat gttgctgggg
    27901 attgttccgc atggcacctt ggctggtacg ggttttacgc cagaccggca tcaacgtgat
    27961 tacgcgtatt atggggctat tgctgatggc attggggatt gaatttatcg ttactggtat
    28021 taaggggatt ttccccggcc tgcttaatta attcctttca aatgaaacgg agctgccatg
    28081 ctccgtttac ttcgtcatta tttttacttt gttcccgc
//
LOCUS       DADKRT010000033        27862 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.033, whole genome shotgun sequence.
ACCESSION   DADKRT010000033 DADKRT010000000
VERSION     DADKRT010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27862
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.033"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..527
                     /locus_tag="JQ356_001223"
     CDS             <1..527
                     /locus_tag="JQ356_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HAY4621378.1"
                     /translation="KYKIMANHHGIIFDEQRKRYIIGSITVSIDEMTNALDPVELAEI
                     INKKHHAVINGKKFKNSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHN
                     GNGGRECIGETGTVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRN
                     GLMPLIRRRTMLQL"
     gene            893..1960
                     /locus_tag="JQ356_001224"
     CDS             893..1960
                     /locus_tag="JQ356_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY4621379.1"
                     /translation="MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIE
                     ATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVA
                     AAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISAQQLDDDRAAA
                     ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPR
                     DGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAP
                     DLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGV
                     AWVRVNEELPWPDDLVVRLPQ"
     gene            1957..4692
                     /gene="rbbA"
                     /locus_tag="JQ356_001225"
     CDS             1957..4692
                     /gene="rbbA"
                     /locus_tag="JQ356_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated ATPase/putative transporter
                     RbbA"
                     /protein_id="HAY4621380.1"
                     /translation="MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLI
                     GPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYH
                     TLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCC
                     ALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWL
                     VAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIA
                     IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW
                     LFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS
                     ERFKLNDVEDVLPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
                     VDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI
                     AYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALM
                     GTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDEL
                     DRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWL
                     QDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSTLSVVR
                     EKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTL
                     TLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGR
                     WIGEVYPTSHFLTIARGTFSKALDLTDMWQLFIPLLIAIPLVMGLSILLLKKQEG"
     gene            4692..5816
                     /locus_tag="JQ356_001226"
     CDS             4692..5816
                     /locus_tag="JQ356_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709253.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HAY4621381.1"
                     /translation="MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTP
                     GSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIP
                     PNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
                     LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPF
                     EIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIF
                     MGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAI
                     LYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA"
     gene            5889..6163
                     /locus_tag="JQ356_001227"
                     /pseudo
     CDS             5889..6163
                     /locus_tag="JQ356_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312384.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            6160..6519
                     /locus_tag="JQ356_001228"
     CDS             6160..6519
                     /locus_tag="JQ356_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HAY4621382.1"
                     /translation="MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSD
                     SIQGLQKEGELSLLEYLEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQV
                     SVNTYIIETLNERLNHL"
     gene            complement(6639..7040)
                     /gene="nikR"
                     /locus_tag="JQ356_001229"
     CDS             complement(6639..7040)
                     /gene="nikR"
                     /locus_tag="JQ356_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HAY4621383.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
                     TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
     gene            complement(7046..7852)
                     /gene="nikE"
                     /locus_tag="JQ356_001230"
     CDS             complement(7046..7852)
                     /gene="nikE"
                     /locus_tag="JQ356_001230"
                     /EC_number="7.2.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikE"
                     /protein_id="HAY4621384.1"
                     /translation="MTLLNVSGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
                     GRSGCGKSTLARLLVGLESPSQGNISWRGESLAKLNRAQRKAFRRDIQMVFQDSISAV
                     NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
                     CLARALAVEPKLLILDETVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
                     CQRVMVMDNGQIVETQAVGDKLTFSSDAGRVLQNAVLPAFPVRRRATEKV"
     gene            complement(7849..8613)
                     /gene="nikD"
                     /locus_tag="JQ356_001231"
     CDS             complement(7849..8613)
                     /gene="nikD"
                     /locus_tag="JQ356_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikD"
                     /protein_id="HAY4621385.1"
                     /translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
                     TCAATLGILPAGVRQTAGEILADGKAVYPCALRGIKIATIMQNPRSAFNPLHTMHTHA
                     RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESP
                     FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
                     IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS"
     gene            complement(8613..9446)
                     /gene="nikC"
                     /locus_tag="JQ356_001232"
     CDS             complement(8613..9446)
                     /gene="nikC"
                     /locus_tag="JQ356_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikC"
                     /protein_id="HAY4621386.1"
                     /translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSH
                     LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
                     VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
                     RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVSGMSFLGLGVT
                     APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHA
                     H"
     gene            complement(9443..10387)
                     /gene="nikB"
                     /locus_tag="JQ356_001233"
     CDS             complement(9443..10387)
                     /gene="nikB"
                     /locus_tag="JQ356_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikB"
                     /protein_id="HAY4621387.1"
                     /translation="MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
                     PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
                     ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
                     YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLND
                     KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
                     IQFFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
     gene            complement(10387..11961)
                     /gene="nikA"
                     /locus_tag="JQ356_001234"
     CDS             complement(10387..11961)
                     /gene="nikA"
                     /locus_tag="JQ356_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HAY4621388.1"
                     /translation="MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
                     TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKLSNGEPFD
                     AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
                     FRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITF
                     NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
                     TAKTPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
                     QKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
                     VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
                     PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
                     PIATEIPFEQIKPVKP"
     gene            complement(12072..12659)
                     /gene="acpT"
                     /locus_tag="JQ356_001235"
     CDS             complement(12072..12659)
                     /gene="acpT"
                     /locus_tag="JQ356_001235"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HAY4621389.1"
                     /translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
                     LSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
                     WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
                     LSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN"
     gene            complement(12714..13763)
                     /locus_tag="JQ356_001236"
     CDS             complement(12714..13763)
                     /locus_tag="JQ356_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HAY4621390.1"
                     /translation="METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFA
                     IVLNPLVTWFIRRGVQRPVTITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT
                     RKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMIGLSGAMASVLLLVMTVVF
                     MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLALM
                     GVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYACILVGALFLVVHMVIG
                     NILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
                     AILLGPGRPKSRLPG"
     gene            13895..15112
                     /locus_tag="JQ356_001237"
     CDS             13895..15112
                     /locus_tag="JQ356_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417930.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4621391.1"
                     /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYV
                     HDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLT
                     AGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
                     GAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLG
                     RVWLYGMALALASAGFGVIATFITLFYDAKSWDGAAFALTLFSCAFVGTRLLFPNGIN
                     RIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVP
                     QQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKK
                     RPPEHVPEAASSS"
     gene            complement(15116..15673)
                     /gene="dcrB"
                     /locus_tag="JQ356_001238"
     CDS             complement(15116..15673)
                     /gene="dcrB"
                     /locus_tag="JQ356_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage sensitivity protein DcrB"
                     /protein_id="HAY4621392.1"
                     /translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAENNATGNPVN
                     LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
                     LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
                     ITLPADDQQKAQTTAENIINTLVIQ"
     gene            complement(15746..16411)
                     /locus_tag="JQ356_001239"
     CDS             complement(15746..16411)
                     /locus_tag="JQ356_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HAY4621393.1"
                     /translation="MNVFSQTQRYKALFWLSLFHLQVITSSNYLVQLPVSILGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
                     HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
                     IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
                     QAS"
     gene            16632..16877
                     /gene="tusA"
                     /locus_tag="JQ356_001240"
     CDS             16632..16877
                     /gene="tusA"
                     /locus_tag="JQ356_001240"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HAY4621394.1"
                     /translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD
                     DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
     gene            complement(16979..19177)
                     /gene="zntA"
                     /locus_tag="JQ356_001241"
     CDS             complement(16979..19177)
                     /gene="zntA"
                     /locus_tag="JQ356_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase
                     ZntA"
                     /protein_id="HAY4621395.1"
                     /translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSSPTLSEN
                     VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
                     AVQKAGYSLRDEQAADEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATT
                     LVGLYPIAHQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
                     WAASRARQGVSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
                     SPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIE
                     EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
                     PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTA
                     IHPATGISESELLTLAAAVEQSATHPLAQAIVREAQVAALAIPAAESQRALVGSGIEA
                     QVNGERVLICAAGKHPADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAA
                     TAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEYKVKAVTELNQHAPLA
                     MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
                     RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
     gene            complement(19251..19877)
                     /locus_tag="JQ356_001242"
     CDS             complement(19251..19877)
                     /locus_tag="JQ356_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000964717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HAY4621396.1"
                     /translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
                     AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYF"
     gene            20018..20377
                     /locus_tag="JQ356_001243"
     CDS             20018..20377
                     /locus_tag="JQ356_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HAY4621397.1"
                     /translation="MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVV
                     VSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDK
                     GTLSYKGTRFVSFVGEQ"
     gene            complement(20380..20649)
                     /locus_tag="JQ356_001244"
     CDS             complement(20380..20649)
                     /locus_tag="JQ356_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HAY4621398.1"
                     /translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
                     GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFKVKK"
     gene            complement(20639..21235)
                     /gene="rsmD"
                     /locus_tag="JQ356_001245"
     CDS             complement(20639..21235)
                     /gene="rsmD"
                     /locus_tag="JQ356_001245"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HAY4621399.1"
                     /translation="MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
                     NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
                     ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
                     ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
     gene            21385..22878
                     /gene="ftsY"
                     /locus_tag="JQ356_001246"
     CDS             21385..22878
                     /gene="ftsY"
                     /locus_tag="JQ356_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HAY4621400.1"
                     /translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEP
                     AKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETP
                     EPVAIEREELPLPEDVNAEEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQAL
                     AAEAAEEAVMVVPPVEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
                     RGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG
                     EILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFELQGKSVMLAAGDTFRA
                     AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH
                     LMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
                     TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            22881..23549
                     /gene="ftsE"
                     /locus_tag="JQ356_001247"
     CDS             22881..23549
                     /gene="ftsE"
                     /locus_tag="JQ356_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HAY4621401.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
                     VGHE"
     gene            23542..24600
                     /gene="ftsX"
                     /locus_tag="JQ356_001248"
     CDS             23542..24600
                     /gene="ftsX"
                     /locus_tag="JQ356_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HAY4621402.1"
                     /translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
                     VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
                     TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
                     ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
                     GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
                     ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTNFDINGLSFDECLLLLLVCSMIG
                     WVAAWLATVQHLRHFTPE"
     gene            24845..25699
                     /gene="rpoH"
                     /locus_tag="JQ356_001249"
     CDS             24845..25699
                     /gene="rpoH"
                     /locus_tag="JQ356_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007899894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HAY4621403.1"
                     /translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            25970..27073
                     /locus_tag="JQ356_001250"
     CDS             25970..27073
                     /locus_tag="JQ356_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY4621404.1"
                     /translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
                     EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
                     PQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENID
                     FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
                     QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
                     VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
     gene            complement(27272..27655)
                     /gene="panM"
                     /locus_tag="JQ356_001251"
     CDS             complement(27272..27655)
                     /gene="panM"
                     /locus_tag="JQ356_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HAY4621405.1"
                     /translation="MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
                     NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGV
                     EDRGVMTAFMQALGFTAQQGGWEKR"
BASE COUNT         6595 a         7229 c         7743 g         6295 t
ORIGIN      
        1 ccaaatacaa aataatggca aatcatcatg ggataatttt tgatgagcag cgaaaacgtt
       61 acattatagg atcgataaca gtctctattg atgaaatgac caatgctctc gatccggtcg
      121 aattagcgga aattattaat aaaaagcacc atgctgtaat taatggcaaa aagtttaaaa
      181 atagccgggc tatctcttgt cgatccttta atcgttattt ttctgtttcg acagattaca
      241 gacctaaact tgaagcacta ttagcatgct cacaaatgtt aggtataaat caagttgttg
      301 cacataacgg taatggtgga agagaatgta taggtgaaac ggggacagtt ttaggtctta
      361 acgcccgtga cagtaaacat gctggaagaa tgttcagcat gcataattgc caaattaacc
      421 ctggtgcagg gcctgagata accactccct ggaagtctta ccagcatgaa aaaaacagaa
      481 atggacttat gcctttgatt agaaggcgca caatgttaca gctctgaacc atagacaaca
      541 tgaatattaa tgttactatc tggttgagac tgttgataaa acgtaaaaag gaatgctctg
      601 ttcctgcaac tgaacaggcg tgaaacgcga tccaacagga tggataccgt tttgtcagcc
      661 agttttatag atcacactta tgagtatgcg tgtttcattt acggccagga atgctgatga
      721 tgacaacatt actacccgtt ttcactaagc cttccccgtt ggcgctcaat gctctgcgcg
      781 ctggtcgtat ttgtcgtttc cttcttatcc cggatggaag aatccgctga acgtcgttcg
      841 gcggcagttg taacacgcgt cgtttgctta cagggattat ggcgggccga ttatggataa
      901 gagtaagcgc catctggcgt ggtgggttgt cggggcactg gcggtggctg ccgtcgtggc
      961 gtggtggctg ttgcgcccgg cgggtgtgcc ggaaggcttt gctgtcagca atgggcgcat
     1021 tgaagcgacg gaagtggata tcgccagcaa aattgccggg cgtatcgaca ccattctggt
     1081 gaaagaaggc cagtttgttc gcgaaggtga agtgctggcg aagatggata ctcgtgtgtt
     1141 gcaggaacag cgactggaag ccatcgcgca aatcaaagag gcacaaagcg ccgttgccgc
     1201 cgcgcaggct ttgctggagc aacgacaaag cgaaactcgc gccgcgcagt cgctggttaa
     1261 tcaacgccag gcagaactgg actccgtagc aaaacgtcat atgcgttccc gttcactggc
     1321 ccaacgaggg gctatttctg cgcaacagct ggatgacgac cgcgccgccg ctgagagcgc
     1381 ccgagctgcg ctggaatcgg caaaagctca ggtttctgct tctaaagccg ctatagaggc
     1441 ggcacgtacc aatatcattc aggcgcaaac ccgcgtcgaa gcggcacaag ccactgaacg
     1501 gcgcattgcc gcagatatcg atgacagcga actgaaagcc ccgcgtgacg gacgcgtgca
     1561 gtatcgggtt gccgagccag gggaagtgct ggcggcaggc ggtcgggtgc tgaatatggt
     1621 cgatctcagc gacgtctata tgactttctt cctgccaacc gaacaggcgg gcacgctaaa
     1681 actgggcggt gaagcacggc tgatcctcga tgccgcgcca gatctgcgta ttccggcgac
     1741 catcagtttt gtcgccagcg tcgcccagtt cacgccaaaa accgtcgaaa ccagcgatga
     1801 acggctgaaa ctgatgttcc gcgtcaaagc gcgtatccca ccggaattac tccagcagca
     1861 tctggaatat gtcaaaacgg gcttgccggg cgtagcgtgg gtgcgggtga atgaagaact
     1921 tccgtggcct gacgacctgg tggtgaggtt gccgcaatga cgcatctgga actggttccc
     1981 gtcccgcctg tcgcgcaact ggcgggcgtg agccagcatt atggaaaaac cgttgcgctg
     2041 aacaatatca ctctcgatat tccggcccgc tgtatggtcg ggctgattgg cccggacggc
     2101 gtcgggaagt cgagtttgtt gtcgttgatt tccggtgctc gtgtcattga gcagggcaat
     2161 gtgatggtgc tgggcggcga tatgcgcgac ccgaagcatc gccgcgacgt ctgcccgcgc
     2221 atcgcctgga tgccgcaggg gctgggcaaa aacctctacc acaccttgtc ggtgtatgaa
     2281 aacgtcgatt ttttcgcccg cctgttcggt cacgacaaag cggagcggga agtgcgaatt
     2341 aatgagctgc tgaccagcac ggggttagca ccgtttcgcg atcgtccggc agggaaactc
     2401 tccggcggga tgaagcaaaa acttgggctg tgctgcgcgt taatccacga cccggaactg
     2461 ttgatccttg atgagccaac aacgggggtt gacccgctct cccgcgccca gttctgggat
     2521 ctgatcgaca gtattcgcca gcggcagagc aatatgagcg tgctggtcgc caccgcctat
     2581 atggaagagg ccgaacgctt cgactggctg gtagcgatga atgccggaga agtgctggca
     2641 accggcagcg ccgaagagct gcggcagcaa acgcaaagcg ccacgctgga agaagcattt
     2701 attaatctgt taccgcaagc gcaacgccag gcgcatcagg cggtagtgat cccaccgtat
     2761 caacctgaaa acgcagagat tgccatcgaa gcgcgcgatc tgaccatgcg ttttggttcc
     2821 ttcgttgccg ttgatcacgt caatttccgc attccacgcg gggagatttt tggattcctt
     2881 ggttcgaacg gctgcggtaa atccaccacc atgaaaatgc ttaccggact gctgcccgcc
     2941 agcgaaggtg aggcgtggct atttgggcaa ccggttgatc caaaagatat cgatacccgc
     3001 cgtcgtgtgg gctatatgtc gcaggcgttt tcgctctata acgaactcac cgtgcggcaa
     3061 aacctggagt tacatgcccg tttgtttcac atcccggaag cggaaattcc cgcgcgagtg
     3121 gctgaaatga gcgagcgttt taagctcaac gacgttgaag atgttctgcc ggagtcattg
     3181 ccgctcggca ttcgccagcg gctttcgctg gcggtggcgg tgattcatcg cccggagatg
     3241 ttaatcctcg atgagcctac ttctggtgtc gatccggtgg cgagggatat gttctggcag
     3301 ttgatggtcg atctctcgcg ccaggacaaa gtgactatct tcatctccac ccactttatg
     3361 aacgaagcgg aacgttgcga ccgcatctca ctgatgcacg ccggaaaagt gcttgccagc
     3421 ggtacaccgc aggaactggt tgagaaacgc ggagccgcca gtctggaaga ggcatttatc
     3481 gcctatttgc aggaagcggc agggcagagc aacgaagccg aagcgccgcc cgtggtacac
     3541 gacaccaccc acgcgccgcg tcagggattt agcctgcgcc gtctgtttag ctacagccgc
     3601 cgcgaagcgc tggaactgcg acgcgatcca gtacgttcga cgctggcgct gatgggaacg
     3661 gtgatcctga tgctgataat gggttacggc atcagtatgg atgtggaaaa cctgcgcttt
     3721 gcggtgctcg accgcgacca gaccgtcagt agccaggcgt ggacactcaa cctctccggt
     3781 tcccgttact ttatcgaaca gccgccgctc accagttatg acgagcttga tcgtcggatg
     3841 cgtgcgggcg atatcacggt ggcgattgag atcccgccca atttcgggcg cgatatcgcg
     3901 cgtggtacgc ctgtggaact cggcgtctgg atcgacggag cgatgcccag tcgtgccgaa
     3961 acggtaaaag gttacgtgca ggcaatgcac cagagttggc ttcaggatgt ggcgagccga
     4021 caatcgacac ccgccagcca aagcgggctg atgaacattg agacgcgtta tcgctataac
     4081 ccggacgtaa aaagcctgcc agcaattgtt ccggcggtga tcccgcttct gctgatgatg
     4141 atcccgtcaa tgctaagcac ccttagcgtg gtgcgggaaa aagagcttgg gtcgattatc
     4201 aacctttacg tgacccccac cacgcgtagt gaatttttgc ttggtaaaca gttgccatac
     4261 atcgcgctgg ggatgctgaa ctttttcctg ctctgcggcc tgtcggtgtt tgtgtttggc
     4321 gtaccgcata aaggcagttt cctgacgctc accctggcgg cgctgctgta tatcatcatt
     4381 gccaccggaa tggggctgct gatctccacc tttatgaaaa gccagattgc cgccattttc
     4441 ggaacggcga ttatcacgtt gatcccggcg acacagtttt ccgggatgat cgatccggta
     4501 gcttcgctgg aagggcctgg acgttggatc ggcgaggttt acccgaccag tcattttctg
     4561 actatcgccc gcgggacgtt ctcgaaagcg ctggatctga ctgatatgtg gcaacttttt
     4621 atcccgttgc tgatagccat cccgctggtg atgggcttaa gtatcctgct gctgaaaaaa
     4681 caggagggat gatgcgccat ttacgcaata tttttaatct gggtatcaaa gagttgcgca
     4741 gtctgctcgg tgataaagcg atgctgacgc tgattgtctt ctcgtttacg gtgtcggtgt
     4801 attcgtcagc gaccgttacg ccaggatcgt tgaacctcgc gccgatcgcc attgccgata
     4861 tggatcaatc gcagttatcg aaccggatcg ttaacagctt ctatcgtccg tggtttttgc
     4921 caccggagat gatcaccgcc gatgagatgg atgccggact ggacgccgga cgctatacct
     4981 tcgcgataaa tattccgcct aattttcagc gtgatgtcct cgccggacgc cagccggata
     5041 ttcaggtgaa cgtcgatgcc acgcgcatga gccaggcatt taccggcaat gggtatatcc
     5101 agaatattat caacggtgaa gtgaacagct ttgtcgcgcg ctaccgtgat aacagcgaac
     5161 cgttggtatc gctggaaacc cggatgcgct ttaacccgaa ccttgatccc gcgtggtttg
     5221 gcggggtgat ggcgatcatc aacaacatta ccatgctggc gattgtattg accggatcgg
     5281 cgctgatccg cgagcgtgaa cacggcacgg tggaacactt actggtgatg ccgataacgc
     5341 cgtttgagat catgatggcg aagatctggt cgatggggct ggtggtgctg gtggtatcgg
     5401 gattatcgct ggtgctgatg gtgaaaggtg tactgggcgt accgattgaa ggctcgatcc
     5461 cgctgtttat gctgggcgtg gcgctcagtc tgtttgccac cacgtcaatc ggcattttta
     5521 tggggacgat agcgcgttca atgccgcaac tggggctgct ggtgattctg gtgctgctgc
     5581 cgctgcaaat gctttccggt ggatccacgc cgcgcgaaag tatgccgcag atggtgcagg
     5641 acattatgct gaccatgccg acgacacact ttgttagcct cgcgcaggcc attctctacc
     5701 ggggtgccgg attcgaaatc gtctggccgc agttcctgac gctgatggca attggcggcg
     5761 cgtttttcac cattgcgctg ctgcgattca ggaagacgat tgggacaatg gcgtaaggaa
     5821 gggaaacttg acttcatact gtgatgtcat actattgatg tcataaagtg aagtcataag
     5881 gacatgccat gagaaccaag gtacaggctt tacggaagaa acaaaaaata cattggatca
     5941 aatatttaaa actcctgttc ctcaagggat caagtggtct gatatagagt cactggttaa
     6001 agcattaggc ggagaaatta aggaaggaag aggttcgcgt tgtaagttca tactaaatat
     6061 gagcgttgcg tgtttccatc ggcctcatcc gtcgccagat accgataaag gcgctgtaga
     6121 aagcgtgcgt gactggttac taagtatagg ggtaaaacca tgatcaaact gaagacgcca
     6181 aactctatgg agattgccgg gcaaccagct gttattacct acgtgccaga actgaatgca
     6241 tttcgtggca aattcctggg cttgtcaggt tattgtgatt ttgtctctga cagcattcag
     6301 gggctgcaaa aagaagggga actttccctg ctagagtatc ttgaggattg taaagctgcg
     6361 ggtattgagc cgtatgcgcg tacagaaaag attaagacct ttacgttacg ctatccagaa
     6421 tcgctgagtg aacgccttaa taatgcggct gcgcagcaac aagtctctgt taatacctat
     6481 attattgaaa cactgaatga gcgtttgaat catttataaa ttttagcggc gtacattacg
     6541 cagaatatct gcctttacag gatctatcta tgcaactgaa cttaatttta taaattaagt
     6601 tcagttaata tcttttcttt cctcgtttca gaaataactc aatcttcctt cggcaagcac
     6661 tgcaaatgcc catgccgcac gccgcgctgg gcgataacgt catcggcaaa atgctgcacg
     6721 tcgcccatat cacctttcag cacggcgatt tccagacagt cgtcgtgatt gatatgcaca
     6781 tgcagcgtgg cgacggagag atcgtggtga tggtgctggg tggagacaat gcggctggct
     6841 aagtcgcgtt tttcgtgttc atacacatag gagagcaccg cgaaaccttg cgtgccgtgc
     6901 tgctgagtgg cctcctgggc cagggcgcta cgcagaatat cgcggatagc ttcggaacgg
     6961 ttgttataac cacgacgctg gctcaggctg tccagcgtct ccagtaaatc atcatcaagc
     7021 gtgatggtga ctcgttgcat ttgcgttaaa ccttttctgt ggcgcgacgg cgcacgggga
     7081 atgcgggtaa taccgcgttt tgtagcacac gtccggcgtc agaggaaaag gttaatttat
     7141 ctcccaccgc ctgggtttcg acgatttgtc cgttgtccat caccatcacc cgctggcaaa
     7201 agcgttctac aagacgtaag tcgtgggtga tgaacaggca ggcggtgcca aactgttgtt
     7261 gcagcttttt cagcaggcga atgacgcccg cctgtaacac gagatcaagg ttagaaacgg
     7321 tttcatccag aatcagcaat ttcggttcga ccgccagcgc gcgtgccagg cagacgcgct
     7381 ggagctggcc gccgcttaac tgcggtgggc gtttgtcgag aacgctgtca tcgagatcga
     7441 ccgccttcag catttcgctg gcgcgcgcca gttgttcgga ttttttcagt gatagcaggt
     7501 ggcgcatcgg ttcacgcagg atctcgcgca cggttttgcg cggatttacg gcactgatgg
     7561 agtcctgaaa caccatctga atatcacggc ggaaggcttt acgttgggcg cgattaagtt
     7621 tcgccagcga ttcgccgcgc cagctaatat tcccttgtga gggagactct aagcctacca
     7681 gcagccgcgc gagggtgctt tttccgcagc cgctgcgtcc cagcagggcg acggtttcgc
     7741 cgcttttcag ggtcagggaa acgttattca gcaccgcctg atgttgatgt tttccgctaa
     7801 atccaccgtg ggcatagtga tgggaaaggc cgctgacgtt aagtaaggtc atgatgccag
     7861 ctccataccg tagagggcga gatgagcgga aaccaggctg cgcgtcaccg tatgtttggg
     7921 ggcgttaaac agcgtttcta catcgccctg ttcgacaatt ttaccttgtg acatcaccgc
     7981 cacgtcatcc gccagacgcg ccacaacgcc catatcatgg gtgaccagca gcattcccgg
     8041 cgcttgtttt tgcataatgc tttccagcag atcgaggatg cgcgcctgtg ctaccacgtc
     8101 gaggtcggtg gtcggttcat cggcgatgat aaacggtgat tcacacagca ccgccatcgc
     8161 aatcatcatg cgctgcaaca tgccgccgct catctcgaac gggtacagct tcagcacgcg
     8221 cgcggcgttt tccagcccca ccgcttctat ggcagcggta agcgtagcgt catcggcggg
     8281 tttccctaac gccaggcagg tttcccgcgc gtgggtgtgc atggtgtgta gcggattaaa
     8341 ggcgctgcgc gggttctgca tgatggtggc aattttgatg ccgcgcaggg cgcagggata
     8401 aaccgctttg ccatcggcta aaatttcccc cgccgtctgg cgaacgccag cgggcaaaat
     8461 gcccagcgtc gcggcgcagg ttaatgattt cccgctgccg ctaccgccga ctaacgccag
     8521 cacgcgcccg cgttgcaggg ttaacgatac accgtgtacc agcggctgcg cggcctgtag
     8581 cgcgatatta cgtagttcaa tctgttgcgg cattagtgtg cgtgctccgt caccagatga
     8641 gggtccagat gatcgcgcag tgcgtcaccc accaggttaa aggccatcac gctgataaac
     8701 agcgccagcc ccggccagaa catttgcagc ggctgggtcc agatatactg gcgcgcgtcg
     8761 ttaatcatca cgccccattc ggcggtcggc gcggtcacac cgaggccaag gaaagacatc
     8821 cccgagacgt gcagcatcat atggccgata tccagcgttg ccagcaccag cagcgaaggg
     8881 atcaccgcgc ctgccagatg atcgacaaac actcgcacat ggcccgcacc ggaaagccgt
     8941 gacgccagca caaactcgcg ttggcgtagt gaaatcacca ggctgcgcac catgcgtgca
     9001 taccacgccc agtgcgacag ggcgatggcg ataattacgt tggtcagccc ggtgccgagc
     9061 acgccaacca taaagaacga cagaatcgag gtcgggaagg tcataaacat atcggcgacg
     9121 cgcatggtgg cctgatcaac gcgcccgcca atcaacccgg cgctgccgcc aataaccagc
     9181 cctaatgtca gcaccagcag caggcaggcc attaccgaac cgagcgacac gcgggtcgct
     9241 gccatcagcc gcgagaaaat atcgcgacct aagtgatcgg tgcccagcca gtgctgcgca
     9301 tccggcgaaa gcaggtgcga cggcaaatca atcgcctggg ggtcatacgg cagccaccac
     9361 tggctggtga gcgcaatcag cgccagcagg gcgataatga tcagcgccag gcgtaccgac
     9421 cagcgggaag agaggaaaaa gttcacgcgt gcgctccttc atgacgacga atgcgcgggt
     9481 ccagcgcggc gttgagcaaa tcgacaatca aattacagac cacaaaaacc accaccatca
     9541 tcagcgtaaa gaactgaatc accggatagt cacggttaaa aatcgccgac accgcatagc
     9601 gcccgacgcc aggccaggca aagatgtttt cgataatcat cgtcccgcca atcaattcgc
     9661 caatgtgcat ccccacggcg gtgatcatcg gcagcgaggc attgcgcaga atatggcggc
     9721 gttcggtctg tttgtcattc aggccgcgta gccgcgccca ggtgacgtga cgctgaccgg
     9781 cgacgtccag catactggcg cgcagcagtc gcgcgttaat cgccagcgac ataaaggcga
     9841 tggaaaccgc aggcaaaatg atgtgctgcc agccgccgta gcccatcgcg ggtagccatt
     9901 gcagatacac cgaaaacgcc atcactagca aaaatgccag ccagaagttg ggcatcgaca
     9961 cgccaagaaa cgcgataaag cgcacggcga aatccggcaa acgatcgcgg tggcgcgccg
    10021 cccagatacc gagcggtacg gaagtgagca gaattaatac cagcgccgca cctgcaagtt
    10081 ccagcgtggc gggcaggaag ttcagcatat cgtccagcac cgggcgttgg ctggcgaatg
    10141 agataccaaa gtcaagatgc agcgccttcc acaaccaggt gccgtactgg acgtacagcg
    10201 gctgatccag tccgagcatg gtgcgggtag aggccagcat ctccggcgtc ggcggcaggt
    10261 tagacagacg caaataatcg agcgccgggt cgccggtacc gaggcgcagc atcagaaaaa
    10321 tgatcaccga ggcggcgagc accatcggga tcagcagcag aaagcggcgt aatacgtaac
    10381 gcaacattaa ggtttcaccg gtttaatctg ttcgaacgga atttcggtgg cgatcggcgc
    10441 gtaggggatg ttacccagct ccggttttga taccaccatc attgagatgt aactgatagg
    10501 cagataaacc gcctcgtcat gcagacgggt cagaatgtcg cgatacagcg cctgacgttg
    10561 cgtttcgtca tgggtcgcca gcacttcgcc gatctcttta tcaatcagcg gtttgtcggc
    10621 taatccttgc tgtgcctgga agtcagcgtg cgacggtacg cgcattgaac tcaggaaggc
    10681 gtgtggatcg tatggcgcgc cccaggtgcg gtggaaaatc atgccaaaac gaccgtcgcg
    10741 ctgacgagca tagatactgc tctcttcttc gccaatcagc gagacatctg cgccaatctg
    10801 gcgcatatca gcctgaatga tttccgccat cgatttgctt aacgcatcgg tgccgatgaa
    10861 cgacagttca atgcgcagcg gctgaccatt tttctcgcgg atgtctttgc ccgcaggcag
    10921 cgtccaaccg gctttttcca gcaacgcttt cgctttctgc ggatcgtact ggcgcggttt
    10981 caggccgagg ttggcgtagg gcacagaagg ggcaaacagg gtgtcggcga cctgctgggt
    11041 gccatacaac gcgttatcaa tcagcgattt tttgtttacc gcgtaattaa gagcttcacg
    11101 tactgccagc tcattggtgg gggttttggc ggtattaagc gccagcatca cggtttcgat
    11161 cggctgtgac agttgggtat ggtaagccgg gttctggcta aagcgggcga aggtatcgag
    11221 cggtaataac ccttcgtttc cgtacagcag gtcgatatcg ccagtttcaa acgccaccgc
    11281 gcgggtagtc gggtccggga tgacgttaaa ggtgatcttt ttaatcgctg gcttttcgcc
    11341 ccagtagttt tcgttacgga cgaagacatc gtactgattc agtttcgatt cctgcaaaat
    11401 ccacggtccg gtgccaatcg gcgctttaat tccgttcatg gtttcatggt ttttaaactg
    11461 cgagggagcg ataaaacgga aaggacgggg cagggccagt tcttgcagga aaggatagta
    11521 ggcgcttttc agggtaattt gcagctctgt tttactgagt gctttaacat caacaatctg
    11581 gtttgccagc tccagccagg cgtgacgttg acggttatcg agcactgcgc ggaagttttc
    11641 tgccgccgcc tcggcatcga acggttcacc gttggataat ttcacgtcat cacgcagggt
    11701 gaaggtccag gttttaccat cttctgaatg agtccagctt tttgccagcc acgggatcac
    11761 cgaaccgtct gcctgatatt tcaccaatgg ttcataaacc atgctctggg cgaacatctg
    11821 gttaggcgtg taaaggtgcg ggtttagtgg cccgacattc accggccagg cggtagtgat
    11881 ttcatctggt gcagcggcat ggacgataaa agacgcacaa gccagcagcg caaatagagt
    11941 gcggcggagt gtggagagca tgataacccc aatggattaa aatagatggc ggaaataagt
    12001 atgacgattt taagtattcg tcatactgat tacctgttct ggatcaatag atgggcagtc
    12061 gggtgggcgg atcagttaac tgaatcgatc cattgcacac tgtcggcggt gagcgtaaag
    12121 ggggtggggg tgcagatcgc aaggcttaaa ttttctagct gacaatggct gactgacagc
    12181 gaggagtgat aggtgctatc tacgctgacg atttgccagg cgctgccgcc acgctgttta
    12241 acgatggctt ctttgcgcgt ccagatgcgc cagaacattt ccagttgctg atcaggatgc
    12301 acggcgtcca tttcagcgtg ttccccgagg ctgaacacgg cgttcgccag ccagcgccag
    12361 ttggcgcgcg ggcgaatcac ttcgatatcg cagccgactt cgccttcatc gctcaacagc
    12421 agagcgatat cgtcaccgct atggcttaag ttgaaccata gcggcgtttc cggcgcgaat
    12481 gcaggtttgc cttgttcgcc atagatgatc tccggtagcg gggaaagcgt gtgcgaaagc
    12541 aatgcacgcc ccgccagcca gcgttcgcgt cgtggacctt gcggtgcttg ctcgcgtaaa
    12601 cccggtggca gtggagctgc gcttaaggtc gaaactttcc ccagaactat ccgatacata
    12661 tcagggccaa cgtttaatgg aaaatgaaag tgcgtatcgt atcacttgtc gcctcatccc
    12721 ggtaaccgac ttttcggtct gcctggcccc agtaaaatcg ccagtttgct accgcctttg
    12781 gtggtttcca tccagatttt acacacgctg gttaatggca ccgaaagtag catccctacc
    12841 gggccgagca gccatcccca aattaacaat gaaagaaata ccaccatggt ggacatcccc
    12901 aggcgatggc ccatcatccg tggttctaaa atattgccga tgaccatatg gaccactaaa
    12961 aacaatgcgc cgaccagaat acatgcgtaa acaccattaa acagcagcac ctgaatcatt
    13021 ggcggtacgg cggaaattac cgcgccgata ttgggcacgt agttgagcaa aaacgccagt
    13081 actgcccaca tcagcgcaaa ctgtacgccc attagcgcca gccccagcca gacgatgaca
    13141 cctgtccata aactgagtag cgtctttaac gccagataat gcgaaacgcc tttaagtgcg
    13201 cggtgtaatc ctgcgatgtg aatctgtggg ttattcagcg caaaacgcat tttgtaaggg
    13261 acgtggcgca cttcaaacag cataaaaact acggtcatca ccagcaaaag cacgctcgcc
    13321 attgccccgg aaagcccgat cattagcgct gtggtgaagg taaccacttt ttccgagtcc
    13381 atccgctgca gcattcgctc cggcgacata tgcaaattaa gaaaaggcaa catctcctgc
    13441 aatttaaaaa gtttgcgcgt cagctcctta ttaaacttcg gcagcataga gataaattcg
    13501 ttaaacgatg ccgccagtac gccgactagc gcggttagtg cgatcagcat caccaccact
    13561 acaatcgtaa tggtaacggg gcgttgtact ccccgacgaa taaaccaggt aacgagcggg
    13621 ttgaggacga tggcaaaaaa cagcgccagt aacagctgca caatgatatc tgccgctgcg
    13681 tgaatgcccg cgaggatcac taccagcgag gccaacttga gcagaatgtg catgcccgtt
    13741 ttatcgggtt gaggggtttc cattggggct tccttgtgac tttttgtgtt aagtgtagcg
    13801 ggagtcacgt cagcaatatt ctgattctta ctgctgattt tcacgtcagc acgtggtaaa
    13861 aatgaaacac tgttgtaaaa atgtggtgat cctcatgccc gaacccgtag ccgaacccgc
    13921 gctaaacgga ttgcgcctga atttgcgcat tgtctccatt gtcatgttta acttcgccag
    13981 ctacctcacc atcgggttgc cgctcgctgt attaccgggc tatgtccatg atgtgatggg
    14041 ctttagcgct ttctgggcag gattggttat cagcctgcaa tatttcgcca ccttgctgag
    14101 ccgtcctcat gccggacgtt acgccgattt gctgggcccc aaaaagattg tcgtcttcgg
    14161 tttatgcggc tgctttttga gcggtctggg atatctgacg gcaggattaa ccgccagtct
    14221 gcccgtcatc agcctgttat tactttgcct gggacgcgtg atccttggga ttgggcaaag
    14281 ttttgccgga acgggatcga ccctgtgggg cgttggcgtg gttggctcgc tgcatatcgg
    14341 gcgagtgatt tcgtggaacg gcattgtcac ttacggggcg atggcgatgg gtgcgccgtt
    14401 aggcgtcgtg ttttatcact ggggcggctt gcaggcgtta gcgttaatca ttatgggcgt
    14461 ggcgctggtg gccattttgt tggcgatccc gcgtccgacg gtaaaagcca gtaaaggcaa
    14521 accgctgccg tttcgcgcgg tgcttgggcg cgtctggctg tacggtatgg cactggcact
    14581 ggcttctgcc ggatttggcg tcatcgccac ctttatcacg ctgttttatg acgctaaaag
    14641 ttgggacggt gcggctttcg cgctgacgct gtttagctgt gcgtttgtcg gtacgcgttt
    14701 gttattccct aacggcatta accgtatcgg cggcttaaac gtagcgatga tttgctttag
    14761 cgttgagata atcggcctgc tactggttgg cgtggcgact atgccgtgga tggcgaaaat
    14821 cggcgtctta ctggcggggg cagggttttc gctggtgttc ccggcattag gtgtagtggc
    14881 ggtaaaagcg gttccgcagc aaaatcaggg ggcggcgctg gcaacttaca ccgtatttat
    14941 ggatttatcg cttggcgtga ccggaccact ggctgggctg gtgatgagct gggcgggcgt
    15001 accggtgatt tatctggcgg cggcgggact ggtcgcaatc gcgttattac tgacgtggcg
    15061 attaaaaaaa cggcctccgg aacacgtccc tgaggccgcc tcatcatctt aaaacttact
    15121 gaataaccag cgtattaatg atgttttctg cggtggtctg cgctttttgc tgatcgtcag
    15181 cgggcagcgt aatttgcatg gtcagcagtt gattacccac gttacccaga ataacggaag
    15241 agtacgccgt ctggcctttc gcggagataa tactgtctaa ctgctgcatt ttgtgacctt
    15301 tcagctcaat ggctttattg gttaccactt gcagctgcgg atcgcggcta cgttgctgat
    15361 cttccagacg cttcgccagc accgccagat cttctttcgg atcatcgccc atgatgacga
    15421 tgactgcttt ctgcccggtg gcgtcggacc agacatgcat gttattggcc tgcgttccca
    15481 gcttaccgct ctggtcggtc atatccgctg gcagcgagaa acttaacttg ccatcaagca
    15541 ggttgacggg attcccggta gcgttatttt ccgcgaccga accctgcgcc gtagcgttag
    15601 tgtctttatc atcacaggcc gcaagcccca taaccagcag gccaattccg acatatttaa
    15661 ccagattgcg cattgacttc ttcctttcga taaacggcca taacggctca ttcatccatc
    15721 ttatcacaac tctgataacg aacctttaac tcgcctgcaa agcgttgatt tcggatttat
    15781 ctgccagtct tttcaacagc atattgagta atacgccata cattggcagg aagaaaacga
    15841 tactgattaa cactttgaaa cagtaatcga ccagcgcgat ttccatccag tgttcagcca
    15901 taaaggcatc cgggctacgc cagaaggcaa tgaagaaaaa ggccagcgtg tcgctgacgt
    15961 taccgaacag tgtggacgct gtcggtgcca gccaccagcg gcgactctga cgcaggcggt
    16021 taaaaacgtg cacgtcgagg atctgtccca gcgcgtaggc catgaaactg gcggtggcga
    16081 tacgggcgac aaacaggttg aagtgggcga gtgcgccgaa tccctgccag gaacccatat
    16141 agaatagcga cgagatgacg taggagatca gcaacgccgg gatcatcacc gcaaagatga
    16201 tacgacgggc cagcggtgcg ccaaaaatac gcacggtcag gtcggtagca aggaaaataa
    16261 acgggaagct aaacgcgccc caggtggtat ggaaacccaa aatggagacg ggaagctgaa
    16321 ccagatagtt actggaggtg atcacctgca gatgaaataa cgataaccag aacaacgcct
    16381 tatagcgttg agtttgcgag aaaacgttca tattgtacct ttttgattaa ccattggggt
    16441 gagggaaccc aatacgtacg acacgtctgt taccttaaca taataacgtg cttacccttt
    16501 tttcgagccg ccgcatgata ctgctttacg ttgacaatgc aatggttaat tttcacgcaa
    16561 tcgttaacct ggtttgctta cggactcaca gggcgtaaac tagcgccgtt tttttatgtg
    16621 atgagaagaa aatgaccgat ctcttttcca gccctgacca cacactcgac gcacttggcc
    16681 tgcgctgccc ggaacccgta atgatggtgc gcaaaactgt gcgcaatatg cagcccggcg
    16741 aaacgttgct gattatcgcc gacgatccgg ccactacccg cgatattcct gggttttgta
    16801 cctttatgga acacgaactg gttgcgaaag agacggatgg actgccttat cgttatttga
    16861 ttcgtaaagg cggttgatgg gggctgattg gcttcgatgc cgccttttcc cctcacccta
    16921 accctctccc cagaggggcg aggggaccga tcgcgctcaa tgttgcgatc ggtttgcctt
    16981 atctcctgcg caacaatctt aacgcattcg ctgtcaccag caccgtcgca cccgtatctg
    17041 ccagcaccgc cagccatagt ccggtcatcc ctaaaagcgt ggtgacgagg aagatccctt
    17101 tcagtcccag cgcaatggtg atgttctggc ggatattggc gtgagtggcg cgtgccagtt
    17161 caatcatttg caccaggccg cgcaggtggt tatgggttaa tgctgcatca gcggtttcca
    17221 gcgccacgtc tgtgccactg cccattgcaa tcccaatggc ggcagctttc atcgctggcg
    17281 cgtcgttaat accgtcaccg accatcgcca gcggcgcatg ttgattcagc tcggtcaccg
    17341 ctttgacttt atattccggc aacaggcccg ctttaaattc cagccccagc tccccggcaa
    17401 ttgccgccgc tgcgcgtgga ttatcgccgg tgaggatcac ccctttgacg cccagcgcgt
    17461 tcagttcact gatggcagtt gcagcatcgg cgcgcagggt atcctgcaat gcaatgatac
    17521 ccagcacgtc atcattacgt actaccagca caaccgtttg cccggcgctt tccagttcat
    17581 taatcaaacc agcaaatgca tcagcgggat gtttcccggc agcgcatatc aacacgcgct
    17641 caccgttaac ctgcgcttca atgccagacc cgaccagcgc ccgctgtgat tcggcggcgg
    17701 gaatggcgag tgcagcaacc tgtgcttcgc gcacgatggc ctgcgccagt ggatgcgtcg
    17761 cgctttgctc gaccgccgcc gccagtgtca gcagttcaga ttcactaata cccgttgccg
    17821 gatgaatcgc ggtaacgcgc ggtttaccga cggtcagcgt accggtttta tcaaacgcca
    17881 cctgagtaac acgacctagt tgttccagcg ccgctccgcc tttaatcaac gccccacgac
    17941 gcgctgctgc cgccagcccg gaggtaatcg ccgcgggcgt ggagataact aacgcacacg
    18001 ggcagccaat cagcagcagc gtcaggcctt tataaatcca ctcctgccag ctggcggcaa
    18061 acagcagcgg tggcaccagc gtcaccagca gggcgacggc cataatcgct ggcgtataaa
    18121 tacggctgaa acggtcgata aaccgctcaa tgggggcgcg gcgctcttcg gcttcttcga
    18181 tcagtttcag aatccggtca atggcgctgg cacccggttc tgacagcact tccagcgtta
    18241 ccagacggtc tacgctggtg gctcctgcag gaactttatc gcccgtcgcg cgctccaccg
    18301 gaatggattc tccggtcagg gcgctttcat caaaactggc aaacggtgag agcagtttac
    18361 cgtcggcagg caaacgccca cctgcggcga cttcaatcac atcgccaggc cgcaggctgt
    18421 taatcgccac ctcttcccgc tcaccgttac gcaggcgcgt ggcggtttct ggtttcagcg
    18481 ccattaacgc gctaacgccc tgacgcgcgc ggctggcggc ccagccttcc agtcgttcac
    18541 caatcaaaaa cagcagcaac accatcgcag cttcagccgt tgcgccaata aacagtgcac
    18601 caatagcggc tacgctcatt aaggtttcaa tggcgaagta gctgccggat ttgatcagcc
    18661 gtaatgcctg atgagcaatc gggtacagcc caaccagcgt ggtcgcgata aacgccagtt
    18721 gcccgaacgg atgattgaac tgctccagac cccagctgat tgccatcatc acgattagtg
    18781 taatcagcgg cagattctct ttcaggcgcg atgcttgtgg ctcgtcggcg gcctgctcat
    18841 cgcgcaggga atagcccgct ttttgcaccg cagattcaac ttgtgcacga atgtcattgt
    18901 cggcatcaac caccagtttt tcggtggcga acaacacctg cacctgattc acacctgcaa
    18961 gctggcgcac ggcattttct accttgcgcg cacaggcggc gcagtccatg ccactgactt
    19021 tccagctata gcgggtgccg gagacgtttt cagagagcgt tggcgagctg gagcatgcgc
    19081 cgtcgcagca acagtcgttg gcgttctgta ccgtggttag cggtttgaac gcagcaaatt
    19141 gaggggcttt cttgccgtga ttgtcaggtg tcgacatggc atactccggt taagtttttt
    19201 ctcattaacc gaaggataca ctctggagtc gactccagag tcaagtttta tcagaaatac
    19261 agtgagcgga cgatgaggaa gtgaccggca aagtagcagg ccgcagcaat cgcgttatcc
    19321 gcacggaagc gtcggcgata gtggctcccc agccagacaa agttactgat aaacagcaac
    19381 gaagcgccaa caaacgcaga gagcgccgga gcggtcggac ggaagaacca cagttcacct
    19441 gccagccaca ccatcaccag cgtcatgccg ataaacgtgc agataggcca acgatactct
    19501 tccagccgcg tccagataat cgccagtaac agcgcaccca gaaccagcaa caccagtggc
    19561 agaggccaga agaaagagag cgtcatctga ctggcgaaat agatggtgta cagcaggtgc
    19621 gagaggaaaa acgcgccgat ggcgtacatc agacgttgac gtggcaacag ggttagcgca
    19681 tcgcccagca gtgaggcgca cagccctgcc agcaccagat agctaatggc gtcgaacatc
    19741 ggcgcttgcc aggccagtaa cagcaggaga agaagggtta acggtttaaa cacccagcgt
    19801 tgccaggttg gcccacgata cgatgcatcc acagatagcc atgcggaaag acagacagcg
    19861 ataaacgacc aaagcatctt agttccttga attcgttatt ttttcgtaag cggaatgcct
    19921 acggtcttgc ttccagttta gtggcgaggg tggacggatg acaacaccat aactagcagg
    19981 gtatgcttat ttccgcattt tccgatgagg gataaagatg agcaaaccac ctcttttctt
    20041 tattgttatc attggcttaa ttgtcgtcgc cgcatcgttt cgttttatgc aacagcgacg
    20101 ggaaaaagct gataatgata tggctccgct ccagcaaaag ctggtggtgg tgagcaacaa
    20161 gcgggaaaaa ccgattaacg atcgccgttc gcgccagcag gaagtgactc cggcaggcac
    20221 cagtatgcgc tatgaggcaa gcttcaaacc gcaaagcgga ggaatggagc agacgtttcg
    20281 cctcgacgcc cagcagtacc atgccctgac agtgggcgat aaaggtacgc tgagctataa
    20341 aggaacgcgc tttgttagct ttgttggcga acaataaggt tattttttaa ctttaaattt
    20401 cttctgccag accagcagtt caaacacgcc gaaaaggaaa atccgcacct tttcggcggt
    20461 ggtcatctgc gggccatctt tcggtaaagt ggatttcaat agcgccagct gcataccatg
    20521 catcagcacg gtaaaaatca gcgccacgtt aacgaaaata ttcagcgggc gcgggaaggg
    20581 atgcaccaga ttgaggatta aaaatcccca aacgcagagc attaacaaac gaccaatatt
    20641 aatcagcatc actttctcct tgtgcttcgc gttgatacag ccgataagcc acctgacccg
    20701 ccactttttc ccgatgtaat gaccagtttg ccggaacagt gggcagaccg ttttcgactt
    20761 cgctttcgac ataaatcagg gcttcgtcag ccagccagcc gttatcttcc agtaaattta
    20821 tcgtctcttc taacaagcca cggcggaacg gtggatcgac aaacacgata ttatgcggtg
    20881 tacctttttg cgccaggaat gacatcgcgt tgctgttcac cacgcgtgca ttgcctgctt
    20941 ttagtgtcgc cagattctta attaactgct gagaaaccgc gcgatccatc tcaatcaacg
    21001 tggcccccgc agcgtagcgc gataacgctt ccagtcccag cgcgccgctc ccggcgaagc
    21061 aatccagaca ttgggcgtca acaatgaccg gagccagcca gttaaacaat gtttcgcgta
    21121 cgcggtcggt ggtggggcgc agacctgggc tatcaggaac cgggagttta cggcctcgcc
    21181 actgcccgcc aataatgcgg atttggccgc tgccggaatg attcggtttt ttcatgataa
    21241 attgctcaat ccgccagata acacatactt gcaggcggtg atgtgaatta agttaagtga
    21301 tagactattt catcattttt ttagctgcta tgtacatagc gttaacgctg tgccatgaag
    21361 caacagcgag gagtgtagtc gcaaatggcg aaagaaaaaa aacgtggctt tttttcctgg
    21421 ctgggctttg gtcaaaaaga gcagaccccg gaaaaagaga cagaagttca gaatgaacaa
    21481 ccggttgtag aagaaatcgt tcaggcgcaa gagcctgcga aggcttctga acaagccgtc
    21541 gaagagcaac cgcaggcgca tactgaagcc gaggcggaaa cttttgctgc cgacgttgtg
    21601 gaagtcactg aacaggttgc tgaaagtgaa aaagcgcagc ctgaagcgga agtcgttgca
    21661 cagccggaac cggtcgtaga agaaacgccg gagccagtgg ctatcgaacg tgaagagctg
    21721 ccgttgccgg aagacgtcaa cgccgaagag gtttcgccag aagagtggca ggctgaagcg
    21781 gaaaccgtag agattgtcga agcggcggaa gaagaagcgg ctaaagaaga aatcaccgac
    21841 gaagagctgg aagcacaggc gctggctgcc gaagcggcag aagaggcggt gatggtggtt
    21901 cctccggtag aagagcagcc ggtggaagaa atcgctcagg agcaggaaaa accgaccaaa
    21961 gaaggtttct tcgcgcgcct gaaacgcagc ctgttaaaaa ccaaagaaaa tctcggttcc
    22021 ggatttatca gcctgttccg cggtaaaaaa atcgacgatg atctgtttga ggagctggaa
    22081 gaacagctgt tgatcgccga tgtgggcgtg gaaaccacac gtaaaattat caccaatctg
    22141 acggaaggcg catcccgcaa gcagcttcgt gatgccgagg cgctctatgg cctgctgaaa
    22201 gaagagatgg gcgagattct ggcgaaagtc gatgagccgc tgaatgttga aggtaaaacg
    22261 ccgttcgtga tcctgatggt gggcgtcaac ggtgtgggta aaactacgac gattggtaag
    22321 ctggcacgtc agtttgagct gcagggtaaa tcggtgatgc tggcggcggg cgatactttc
    22381 cgtgcagcag cggttgaaca gcttcaggtc tggggtcagc gcaacaatat tccggtgatt
    22441 gcccagcata ccggtgcgga ttccgcctct gttatcttcg acgccattca ggcagctaaa
    22501 gcgcgtaata tcgacgtcct gattgccgat accgccggac gcctgcagaa caaatcgcac
    22561 ctgatggaag agttgaagaa aatcgtccgc gtgatgaaga aactcgacgt tgaagcgccg
    22621 catgaagtta tgctgactat tgatgccagt accgggcaga atgcggtaag ccaggccaaa
    22681 ctgttccacg aagccgttgg cttaaccggc atcacgctaa cgaaactgga cggcacggcg
    22741 aaaggcgggg taattttctc ggtggctgac cagtttggta tccctatccg ctacattggt
    22801 gtcggcgaac gtattgagga tttgcgtccg tttaaggcgg acgactttat agaggcactt
    22861 tttgcccgag aggattaaca atgattcgct ttgaacatgt cagcaaggct tatctcggtg
    22921 ggagacaggc gctgcagggc gttacgttcc atatgcagcc gggtgagatg gcgtttctga
    22981 ccggtcattc cggcgcaggg aaaagtaccc tcctgaagct gatctgtggg attgagcggc
    23041 ccagcgccgg gaaaatctgg tttagcggcc atgacatcac gcgtctgaaa aaccgtgaag
    23101 ttccgtttct gcgccgccag attggcatga ttttccagga tcaccatcta ctgatggacc
    23161 gtactgtcta cgataacgtg gcgatcccgc tgattatcgc tggtgccagc ggtgacgata
    23221 ttcgtcgccg ggtgtcggcg gcactggata aagtcgggct actggacaaa gcgaagaact
    23281 tccctattca gctttccggc ggtgaacaac agcgtgttgg cattgcccgc gcggtggtga
    23341 ataagcccgc ggtactgctg gcggacgaac cgaccggtaa cctggacgac gcgttgtcgg
    23401 aagggattct acgtctgttt gaagagttta accgcgttgg ggtaaccgta ttgatggcaa
    23461 cgcacgacat caacctgatt tcacggcgtt cctatcgcat gctcaccctg agcgatggtc
    23521 acttgcatgg aggcgtgggc catgaataag cgcgatgcaa tcaatcatat tcggcagttt
    23581 ggtgggcgtc tggatcgctt ccgtaaatcg gtcggcggct caggcgacgg cggtcgtaac
    23641 gcaccgaaac gcgcgaaatc ctcgccaaaa ccggtaaatc gcaaaaccaa cgttttcaac
    23701 gaacaggtgc gctatgcctt ccacggcgca ttgcaggatc tgaaaagcaa accgttcgcc
    23761 acgtttttaa cggtgatggt tatcgccatc tccctgacgc tgcccagcgt ctgttatatg
    23821 gtgtacaaaa acgttaatca ggcggcgacg cagtattatc cgtcaccgca aatcactgtt
    23881 tacttgcaaa aaacgctgga cgatgacgcc gctgcgggcg tggtggcaca gttgcaggcc
    23941 gagcaaggcg tggagaaagt gaactatctt tctcgtgaag acgcactggg cgagttccgt
    24001 aactggtctg gttttggtgg tgcgctggat atgctggaag aaaacccgct tccggcagtg
    24061 gcggtggtga tcccgaaact cgattttcag gggacggaat cactcaatac gctgcgtgat
    24121 cgtatcacgc agattaacgg cattgacgaa gtgcggatgg atgacagctg gtttgcccgt
    24181 ctggcggcgt tgaccgggct ggtcgggcgc gtttcggcga tgatcggcgt gttgatggtg
    24241 gcggcagtgt tcctcgtcat cggcaacagc gtacgtctga gcatctttgc tcgccgtgac
    24301 tccatcaacg tgcagaaact gattggtgcg acggatggtt tcatccttcg cccgttcctg
    24361 tatggtggcg cactgctggg attttctggc gcattgttgt cattaatttt gtcagaaatt
    24421 ctggtgctgc gattgtcatc ggcggttgcg gaagtggcac aggttttcgg aacgaatttt
    24481 gatatcaatg gtttatcgtt cgatgaatgc ctgctattgc tgctggtatg ctcgatgatt
    24541 ggctgggtgg cagcgtggct tgccacggta caacatttac gccactttac gcctgaataa
    24601 taaaagcgtg ttatactctt tccctgcaat gggttccgta gcagggaaag agatcccgtt
    24661 gtctcttccc ggtatttcat ctctatgtca cattttgtgc gtaatttatt cacaagcttg
    24721 cattgaactt gtggataaaa tcacggtctg ataaaacagt gaatgataac ctcgttgctc
    24781 ttaagctctg gcacagttgt tgctaccact gaagcgccag aagatatcga ttgagaggat
    24841 ttgaatgact gacaaaatgc aaagtttagc tttagcccca gttggcaacc tggattccta
    24901 catccgggca gctaacgcgt ggccgatgtt gtcggctgac gaggagcggg cgctggctga
    24961 aaagctgcat taccatggcg atctggaagc agctaaaacg ctgatcctgt ctcacctgcg
    25021 gtttgttgtt catattgctc gtaattatgc gggctatggc ctgccacagg cggatttgat
    25081 tcaggaaggt aacatcggcc tgatgaaagc agtgcgccgt ttcaacccgg aagtgggtgt
    25141 gcgcctggtc tccttcgccg ttcactggat caaagcagag atccacgaat acgttctgcg
    25201 taactggcgt atcgtcaaag ttgcgaccac caaagcgcag cgcaaactgt tcttcaacct
    25261 gcgtaaaact aagcagcgtc tgggctggtt taaccaggat gaagtcgaaa tggtggcccg
    25321 tgaactgggc gtaaccagca aagacgttcg tgagatggaa tcacgtatgg cggcacagga
    25381 catgaccttt gatctgtctt ccgacgacga ttccgacagc cagccgatgg caccggtgct
    25441 ctatctgcag gataaatcat ctaactttgc cgacggcatc gaagatgata actgggaaga
    25501 gcaggcggca aaccgtctga ccgacgcgat gcaaggtctg gacgaacgca gccaggacat
    25561 catccgcgcg cgctggctgg acgaagacaa caagtccacg ttgcaggaac tggctgaccg
    25621 ttacggtgtt tccgctgaac gtgtacgcca gctggaaaag aacgcgatga aaaaactgcg
    25681 cgctgctata gaagcgtaat ttccgctatt aagcagagaa ccctggatga gagtccgggg
    25741 tttttgtttt ttgggcctct acaataatca attccccctc cggcaaaacg tcaatcccca
    25801 cgcagattgt taataaactg tcaaaatagc tattccaata tcataaaaat ggggtatgtt
    25861 ttagcagagt atgctgctaa agcacgggta gtcatgcata aaacgaaata aagtgctaaa
    25921 tcacaacacc acaacacacg taataaccag aagaatgggg attctcagga tgaatataaa
    25981 gggtaaagcg ttactggcag gatgtatcgc gctggcattc agcaatatgg ctctggcaga
    26041 agatattaaa gtcgcggtcg tgggcgcaat gtccggtccg gttgcgcagt acggtgacca
    26101 ggagtttacc ggcgcagagc aggcggttgc ggatatcaac gctaaaggcg gcattaaagg
    26161 caacaaactg caaatcgtaa aatatgacga tgcctgtgac ccgaaacagg cggttgcggt
    26221 ggcgaacaaa gtcgttaacg acggcattaa atatgtgatt ggtcacctct gttcttcatc
    26281 aacgcagcct gcgtctgata tctacgaaga cgaaggcatt ttaatgatca ccccagcggc
    26341 aaccgcgccg gagctgaccg cccgtggcta tcagctgatc ctgcgcacca ccggcctgga
    26401 ctccgaccag gggccgacgg cggcgaaata tattcttgag aaagtgaaac cgcagcgtat
    26461 tgctatcgtt cacgacaaac agcaatacgg cgaaggtctg gcgcgagcgg tgcaggacgg
    26521 cctgaagaaa ggcaatgcta acgtggtgtt ctttgatggt atcaccgccg gggaaaaaga
    26581 tttctcaacg ctggtggcgc gtctgaaaaa agagaatatc gacttcgttt actacggcgg
    26641 ttatcacccg gaaatggggc aaatcctgcg tcaggcacgc gcggcagggc tgaaaactca
    26701 gtttatgggg ccggaaggtg tggctaacgt ttcgctgtct aacattgcgg gcgaatcagc
    26761 ggaagggctg ctggtgacca agccgaagaa ctacgatcag gttccggcga acaaacccat
    26821 tgttgacgcc atcaaagcga aaaaacagga cccaagcggc gcattcgttt ggaccaccta
    26881 cgccgcgctg caatctttgc aggcgggcct gaatcagtct gacgatccgg ctgagatcgc
    26941 caaatacctg aaagcgaact ccgtggatac cgtgatgggt ccgctgacgt gggatgagaa
    27001 aggtgatctg aaaggctttg agttcggcgt atttgactgg cacgccaacg gcacggcgac
    27061 cgatgcgaag taatcattaa tcggcaactt tgggttgccg ccaaattgct aatatcgagt
    27121 acgttgcttc atgccggatg cggcgtaaac gccttatccg gcctacaaga tccaaagaaa
    27181 tcagtaaatt gcaacacaca ttgtaggcct gataagcgta gcgcatcagg caatttctcg
    27241 ttggtcatca cttttgaaat caacttgacg attaacgctt ctcccagccg ccctgttgcg
    27301 ccgtaaatcc cagtgcctgc ataaacgccg tcatcacacc gcgatcttcc acgcctgcat
    27361 ccgccatcca ccagcatgaa acgccaggat tgttacgcaa aacctcttcc agcagatatt
    27421 gccccacacc gcgacgtcgg gtgacttccc gcacacgcag ggaatccagt gctccctcgg
    27481 tgccgcttaa ggttacccgt acggcagcga gcaggcgctc gttaaaacgc gcggcgtaga
    27541 tacggtggtt atcgtcaacc tgtaaagagg aaggggaata ctccggccag atcttttgca
    27601 ggtcaatccg gtcctggtcg ctaaagtttt ctaatcgaat gatggtcagc ttcatgggta
    27661 acccgtgtaa atcacaaaag tggaaccagt gtagcgaaat aatttaatcg gaggctttct
    27721 cttttttatt tcttttggca ggtgattaat tttttaacag caataattac aaagttaaaa
    27781 cattagagaa tgaaaaatac ccagcataat cccctgaatg gtagtgaatt attccgccct
    27841 ttgtgccgtt attttatgct ga
//
LOCUS       DADKRT010000034        27676 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.034, whole genome shotgun sequence.
ACCESSION   DADKRT010000034 DADKRT010000000
VERSION     DADKRT010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27676
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.034"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(211..420)
                     /gene="fumD"
                     /locus_tag="JQ356_001252"
     CDS             complement(211..420)
                     /gene="fumD"
                     /locus_tag="JQ356_001252"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HAY4621406.1"
                     /translation="MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTA
                     LANKRIQRSELDKQAMETVINALVK"
     gene            977..2389
                     /gene="pykF"
                     /locus_tag="JQ356_001253"
     CDS             977..2389
                     /gene="pykF"
                     /locus_tag="JQ356_001253"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase PykF"
                     /protein_id="HAY4621407.1"
                     /translation="MKKTKIVCTIGPKTESEEILAKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
                     SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
                     MVSGALVPSGTTNTASVHVL"
     gene            2700..2936
                     /locus_tag="JQ356_001254"
     CDS             2700..2936
                     /locus_tag="JQ356_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006675846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane lipoprotein"
                     /protein_id="HAY4621408.1"
                     /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
     gene            complement(3000..4004)
                     /gene="ldtE"
                     /locus_tag="JQ356_001255"
     CDS             complement(3000..4004)
                     /gene="ldtE"
                     /locus_tag="JQ356_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
                     /protein_id="HAY4621409.1"
                     /translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV
                     QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL
                     AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
                     GIKLLPVVPAGPNNPLGRYALRFAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
                     ALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQ
                     FKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRARQ
                     "
     gene            complement(4153..4569)
                     /gene="sufE"
                     /locus_tag="JQ356_001256"
     CDS             complement(4153..4569)
                     /gene="sufE"
                     /locus_tag="JQ356_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HAY4621410.1"
                     /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSP
                     QNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
     gene            complement(4582..5802)
                     /gene="sufS"
                     /locus_tag="JQ356_001257"
     CDS             complement(4582..5802)
                     /gene="sufS"
                     /locus_tag="JQ356_001257"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HAY4621411.1"
                     /translation="MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEA
                     EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA
                     NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTL
                     FDEKTRLLAITHVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA
                     GTPNTGGIIGLGAALEYVSVLGLNNIAEYELNLMHYALSQLESVPNLTLYGPQNRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD
                     RLVTGLQRIHRLLG"
     gene            complement(5799..7070)
                     /gene="sufD"
                     /locus_tag="JQ356_001258"
     CDS             complement(5799..7070)
                     /gene="sufD"
                     /locus_tag="JQ356_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HAY4621412.1"
                     /translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR
                     KHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSDAIE
                     GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMYITQG
                     VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL
                     AFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP
                     VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
                     LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
                     FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
     gene            complement(7045..7791)
                     /gene="sufC"
                     /locus_tag="JQ356_001259"
     CDS             complement(7045..7791)
                     /gene="sufC"
                     /locus_tag="JQ356_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HAY4621413.1"
                     /translation="MLSIKDLHVSVEDKAILRGLSLAVRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
     gene            complement(7801..9288)
                     /gene="sufB"
                     /locus_tag="JQ356_001260"
     CDS             complement(7801..9288)
                     /gene="sufB"
                     /locus_tag="JQ356_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416198.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HAY4621414.1"
                     /translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR
                     AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT
                     CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
                     EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
                     MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN
                     AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
                     RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI
                     MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
                     RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
     gene            complement(9297..9665)
                     /gene="sufA"
                     /locus_tag="JQ356_001261"
     CDS             complement(9297..9665)
                     /gene="sufA"
                     /locus_tag="JQ356_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HAY4621415.1"
                     /translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLG
                     VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQI
                     FKFHNPKAQNECGCGESFGV"
     gene            complement(10212..10400)
                     /locus_tag="JQ356_001262"
     CDS             complement(10212..10400)
                     /locus_tag="JQ356_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621416.1"
                     /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL
                     SSAELKEEIYFAWRLGVH"
     gene            complement(10500..10910)
                     /gene="menI"
                     /locus_tag="JQ356_001263"
     CDS             complement(10500..10910)
                     /gene="menI"
                     /locus_tag="JQ356_001263"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HAY4621417.1"
                     /translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGIC
                     KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL"
     gene            complement(10907..13963)
                     /locus_tag="JQ356_001264"
     CDS             complement(10907..13963)
                     /locus_tag="JQ356_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY4621418.1"
                     /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGVRAVLLGGDVLDTQPLPVELAETLGKSNTTIGRIYNTVY
                     QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
                     DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCREL
                     AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
                     GMFGHVDAGVLHVRPELDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
                     SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI
                     AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTL
                     CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
                     KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTS
                     YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
                     LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY
                     FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
     gene            14352..15464
                     /gene="ydiK"
                     /locus_tag="JQ356_001265"
     CDS             14352..15464
                     /gene="ydiK"
                     /locus_tag="JQ356_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HAY4621419.1"
                     /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
                     VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS
                     GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
                     GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
                     VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
                     WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
                     AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK"
     gene            15650..15757
                     /gene="rprA"
                     /locus_tag="JQ356_001266"
     ncRNA           15650..15757
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="JQ356_001266"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            15893..16272
                     /locus_tag="JQ356_001267"
                     /pseudo
     CDS             15893..16272
                     /locus_tag="JQ356_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001014786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YdiL family protein"
     gene            16217..16939
                     /locus_tag="JQ356_001268"
                     /pseudo
     CDS             16217..16939
                     /locus_tag="JQ356_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707590.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            16951..17817
                     /gene="ydiB"
                     /locus_tag="JQ356_001269"
                     /pseudo
     CDS             16951..17817
                     /gene="ydiB"
                     /locus_tag="JQ356_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416207.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="quinate/shikimate dehydrogenase"
     gene            17849..18607
                     /gene="aroD"
                     /locus_tag="JQ356_001270"
     CDS             17849..18607
                     /gene="aroD"
                     /locus_tag="JQ356_001270"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HAY4621420.1"
                     /translation="MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDI
                     LEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
                     AAIDSGLVDMIDLELFTGDDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
                     MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEV
                     FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
     gene            18753..20348
                     /locus_tag="JQ356_001271"
     CDS             18753..20348
                     /locus_tag="JQ356_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HAY4621421.1"
                     /translation="MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEAT
                     TLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRI
                     SELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKE
                     DLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNN
                     GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQSQLYGGAPVNRFISGDFTLD
                     DSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVET
                     GPIGGITSQGIAFGANVNTRAILDMTSQFNFYHGGGLDVCYLSFAEVDQHGNVGVHKF
                     NGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEIADGKLNIVQEGRVKKFIQELPEI
                     TFSGKIALERELDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPE
                     LKLMDERLFIDAAMGFVLPEAAH"
     gene            20362..21513
                     /locus_tag="JQ356_001272"
     CDS             20362..21513
                     /locus_tag="JQ356_001272"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310429.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY4621422.1"
                     /translation="MDFSLTEEQELLLASIRELITTNFAEEYFRTCDQNGTYPREFMR
                     ALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSA
                     EQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAK
                     EYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEV
                     EESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGH
                     NQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAI
                     QIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK"
     gene            complement(21556..22467)
                     /locus_tag="JQ356_001273"
     CDS             complement(21556..22467)
                     /locus_tag="JQ356_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY4621423.1"
                     /translation="MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNET
                     ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ
                     GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL
                     YYENFKNAYRSEQGYIKKDVLIKDILFYLSNNYREKITLEQLSKKFRASVSYICHEFT
                     KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS
                     DYRRQFKNCFAEQEILSEFPQPVSLVG"
     gene            22781..23552
                     /locus_tag="JQ356_001274"
                     /pseudo
     CDS             22781..23552
                     /locus_tag="JQ356_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416212.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein"
     gene            23572..24510
                     /locus_tag="JQ356_001275"
     CDS             23572..24510
                     /locus_tag="JQ356_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit alpha"
                     /protein_id="HAY4621424.1"
                     /translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV
                     MPYGPKCIYVLEQNDALQRTENYAESIAAPLKDKHPAMLLLVATKRGKALAARLSVQL
                     NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH
                     QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAA
                     VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVI
                     VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR"
     gene            24566..25855
                     /locus_tag="JQ356_001276"
     CDS             24566..25855
                     /locus_tag="JQ356_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY4621425.1"
                     /translation="MSDDKFDAIVVGADVASSVAALVMARAGLDVLVIERGDSAGCKN
                     MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS
                     YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILQANVVVLAD
                     GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD
                     GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
                     SAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA
                     KEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYSRMVADIMNEMF
                     TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL"
     gene            25852..26145
                     /locus_tag="JQ356_001277"
     CDS             25852..26145
                     /locus_tag="JQ356_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY4621426.1"
                     /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKA
                     CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG"
     gene            26148..>27676
                     /gene="fadK"
                     /locus_tag="JQ356_001278"
     CDS             26148..>27676
                     /gene="fadK"
                     /locus_tag="JQ356_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416216.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="medium-chain fatty-acid--CoA ligase"
                     /protein_id="HAY4621427.1"
                     /translation="MHPTGPHLGPDVLFRESKMKVTLTFNEQRRAAYRQQGLWGDASL
                     ADYWQQTARAMPDKIAVVDNHGATYTYSALDHAASCLANWMLAKGIESGDRIAFQLPG
                     WCEFTVIYLACLKIGAVSVPLLPSWREAELVSVLNKCQAKMFFAPTLFKQTRPVDLIL
                     PLQNQLPQLQQIVGVDKLAPATSSLSLSPIIADNTSLTTAITTHGDELAAVLFTSGTE
                     GLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARS
                     VLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIP
                     KKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDAR
                     KTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYCSGDLCRMDEAGYIKITGR
                     KKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLS
                     L"
BASE COUNT         6906 a         7001 c         6803 g         6966 t
ORIGIN      
        1 aactgatatt tattatcatt tgaaataaat ttaacttaag cgacaattat ttgtgacgtt
       61 cattgcagaa aataaaaata atattatcgt tataaattaa aatacatacc gcaattcgta
      121 taatttcagc agttgttatt tagaatgatt aactggaccg caactgaagc aagaatatca
      181 ggatgaagct taccgcctca tcctgaatgg tcattttacc agtgcgttaa tgacggtttc
      241 catcgcctgc ttatccagct cactgcgctg aatgcgttta ttggctaatg ctgtacgtaa
      301 tacgcctgcg ataacaatat gctttggttc ctgccccaga tcgcgcattt ccagcacaac
      361 tttaccgaca actctgcaca tttctcggta cagttcatcc tcttttgtcc gatttcccat
      421 tctttatacc tatttatcat gccaactatc agcatatatc aatctaacca attaaacaaa
      481 aatcaaacaa aatcagacaa ataacgcgat aaattatttt aactgtagca attgagcgat
      541 gatatattta tacaccggat gaactttcac ttatcctcac actgacaact ttggcaccag
      601 acgttgcgca aacagcgaag tttttgcgta accttttccc tggaacgtta aatctttgat
      661 aacaatttat tgtctaacaa gttgtatatt ttttgaaacg ctgtttttgt tttccttttg
      721 gattaatttc agcgtataat gcgcgccaat tgactcttga atggtttcag cactttggac
      781 tgtagaactc aacgactcaa aaacaggcac tcacgttggg ctgagacaca agcacacatt
      841 cctctgcacg ctttttcgat gtcacctatc cttagagcga ggcaccacca ctttcgtaat
      901 accggattcg ctttccggca gtgcgcccag aaagcaagtt tctcccatcc ttctcaactt
      961 aaagactaag actgtcatga aaaagaccaa aattgtttgc accatcggac cgaaaaccga
     1021 atctgaagag atattagcta aaatgctgga cgctggcatg aacgttatgc gtctgaactt
     1081 ctctcatggt gactatgcag aacacggtca gcgcattcag aatctgcgca acgtgatgag
     1141 caaaactggt aaaaccgccg ctatcctgct tgataccaaa ggtccggaaa tccgcaccat
     1201 gaaactggaa ggcggtaacg acgtttctct gaaagctggt cagaccttta ctttcaccac
     1261 tgataaatct gttatcggca acagcgaaat ggttgcggta acgtatgaag gtttcactac
     1321 tgacctgtca gttggcaaca ccgtactggt tgacgatggt ctgatcggta tggaagttac
     1381 cgccattgaa ggtaacaaag ttatctgtaa agtgctgaac aacggtgacc tgggcgaaaa
     1441 caaaggtgtg aacctgcctg gcgtttccat tgctctgcca gcactggctg aaaaagacaa
     1501 acaggacctg atctttggtt gcgaacaagg cgtagacttt gttgctgctt cctttattcg
     1561 taagcgttct gacgttatcg aaatccgtga gcacctgaaa gcgcacggcg gcgaaaacat
     1621 ccacatcatc tccaaaatcg aaaaccagga aggcctcaac aacttcgacg aaatcctcga
     1681 agcctctgac ggcatcatgg ttgcgcgtgg cgacctgggt gtagaaatcc cggtagaaga
     1741 agttatcttc gcccagaaga tgatgatcga aaaatgtatc cgtgcacgta aagtcgttat
     1801 cactgcgacc cagatgctgg attccatgat caaaaaccca cgcccgactc gcgcagaagc
     1861 cggtgacgtt gcaaacgcca tcctcgacgg tactgatgca gtgatgctgt ctggtgaatc
     1921 cgcaaaaggt aaatacccgc tggaagcggt ttctatcatg gcgaccatct gcgaacgtac
     1981 cgaccgcgtg atgaacagcc gtctcgagtt caacaatgac aaccgtaaac tgcgcattac
     2041 cgaagcggta tgccgtggtg ccgttgaaac tgctgaaaaa ctggatgctc cgctgatcgt
     2101 ggttgctact cagggcggta aatctgctcg cgcagtacgt aaatacttcc cggatgccac
     2161 catcctggca ctgaccacca acgaaaaaac ggctcatcag ttggtactga gcaaaggcgt
     2221 tgtgccgcag ctggttaaag agatcacttc tactgatgat ttctaccgtc tgggtaaaga
     2281 actggctctg cagagcggtc tggcacacaa aggtgacgtt gtagttatgg tttctggtgc
     2341 actggtaccg agcggcacta ctaacaccgc atctgttcac gtcctgtaat attgcttttg
     2401 tgaattaatt tgtatatcga agcgccctga tgggcgcttt ttttatttaa tcgataacca
     2461 gaagcaataa aaaatcaaat cggatttcac tatataatct cactttatct aagatgaatc
     2521 cgatggaagc atcctgtttt ctctcaattt ttttatctaa aacccagcgt tcgatgcttc
     2581 tttgagcgaa cgatcaaaaa taagtgcctt cccatcaaaa aaatattctc aacataaaaa
     2641 actttgtgta atacttgtaa cgctacatgg agattaactc aatctagagg gtattaataa
     2701 tgaaagctac taaactggta ctgggcgcgg taatcctggg ttctactctg ctggcaggtt
     2761 gctccagcaa cgctaaaatc gatcagctgt cttctgacgt tcagactctg aacgctaaag
     2821 ttgaccagct gagcaacgac gtgaacgcaa tgcgttccga cgttcaggct gctaaagatg
     2881 acgcagctcg tgctaaccag cgtctggaca acatggctac taaataccgc aagtaatagt
     2941 acctgtgaag tgaaaaatgg cgcacattgt gcgccatttt ttttgtctgc tatttaccac
     3001 tactgcctcg cgcgtaacat attcccttgc tctggttcac cattctgcgc tgactctact
     3061 gaaggcgcat tgctggctgc gggagttgct ccactgctca ccgaaaccgg ataccctgcc
     3121 cgacgataca acgctttatc gactaacttc tgatctacag ccttattgtc tttaaattgc
     3181 gtaaagcctg ctggcagtgt gtatggcatt gtctgaacgt tctgctgttc ttctgccgat
     3241 agtggtcgat gtacttcaac ataacgcatc ccgttaggct ccacggaata tttcaccggt
     3301 tcgttgatca ctttcaccgg cgttcccgtc cgcacgctgg agaataaggc tttaatatcc
     3361 ggtgcattca tgcgaataca gcccgaactg acgcgtaaac cgacgctgtc cggcgcactg
     3421 gtaccatgaa tgaggtattc gccattacca tgcgcgaagc gcagtgcgta acgtcctagc
     3481 gggttatttg gtccggcagg aacgactggc agtaatttaa tgccacgctc cagcgaacgt
     3541 tgacgaatgc ctgccgtagg cgtccaggtt ggattaggga ttttctgccc cacacgcgtt
     3601 tccatcaccg gcgtttccag cccctgcaag ccaataccta tcggataaac ctgcacgata
     3661 ttttctcccg gcggataata ataaaggcgc agctctgcaa ggttaacgat aatcccctga
     3721 cgcggtgcat caggtaataa cagttgtgaa ggaatagtta tcgtcgtacc aggttttggc
     3781 accggggcga tagtgttatt ggcttcaagg atcaacattg ccgcagtatc aaaacgtcgg
     3841 gcaatagcct gaaggttttt atccccttct tgcaccgtat acgtttgatt ttgcccaacc
     3901 agtcggcttc cggttggtgg tagcggataa tcaaccgccc aggcagcctg gatggcgcta
     3961 aaagcgccga taagcgtgag tgtaagcaaa gacgcgcgtt tcattgtaaa cctcctgtat
     4021 ttgccggaga ctcacgctga aacgtcggat ggcgcttatg ttcacctgaa accaaaacac
     4081 tcctgtgcag gtcagtgtaa acattgacca tccggcaatg tgagccaacc ggatgaaagc
     4141 tgtcccttta gtttagctaa gtgcagcggc tttggcgcga attgcgcgaa tcatcgcttc
     4201 cagaccttgt gaacgagatg gggtgagatg ttgggtgagc gccatttttt caaaccacgg
     4261 acgcacatcg aaattgacaa tatcctgcgg cgtcatctga tcgtagagaa taaatacgac
     4321 cgcaataagc cctttcacaa tcgccgcatc gctgtcgccc tgcaattcaa taattccctg
     4381 cgcattctgg cgcatgacaa tccacacctg attctggcag ccctgaatgc tattttgtgg
     4441 gcttcggtct tcgtcgcgta attctggcag acgctggccc agctcaataa tgtagagata
     4501 tttctcttcc cagttggcgc agcgtaaaaa attacgcagc aatttttctt tatccggcaa
     4561 taaagccata gtgcctccct gttatcccag cagacggtga atacgttgca ggccggtcac
     4621 cagacgatcc acttcttcat gagtgttata catggccagc gacgcccgac acatcgcagg
     4681 gacgttgtaa taggccatta atggcatagc gcagtgatgt ccggtacgca cagcaatgcc
     4741 gtaattatcg agaaaactgc caacatcata ggcgtggtgt ttaccgagat taaaagcaat
     4801 aacgccaagc ctgttttgtg ggccatagag agtgagattc ggtacagatt ccagctgtga
     4861 tagcgcgtaa tgcatcagat tcagttcata ctcggctatg ttattaagcc ccagcaccga
     4921 aacatattcc agcgccgcgc caagaccaat gatgcccccg gtattgggtg taccggcttc
     4981 aaaccgccat ggtgctttgg tccaggtagt gccttcactc aggctgacgg tggcgatcat
     5041 agaaccgccc ccttcccacg gcggcatctc ctgcaacaag gcttctttga cataaagaat
     5101 gccaatcccg gtggggccat acagtttatg cccggaaaac acgtaaaaat cgcaatccag
     5161 cgcctgaaca tccaccggat gatgcatcac cgcctgagcg ccatccacca gcacttttgc
     5221 gccatgctgg tgcgcaagcg tgatcattcc cgccagtgga ttttctgtgc caagcacgtt
     5281 ggagacatga gtaattgcca gcaggcgagt tttctcatca aacagcgtat gcagcgtctc
     5341 cagttgcagc gtaccgtcgg ggttgagagg gatcacacgc agctctgcgc caacgcgtgc
     5401 gcaaagcatc tgccagggga caatgttagc gtggtgctcc atctgactga tgatgatgtt
     5461 atcgcccgcc cgcacattgc tgttgcccca gctattggcg accagattga tcccttccgt
     5521 cgtgccgcgg acgaacacca gctcttccgc cgaacgggca ttaataaaca gcgatgcccg
     5581 cttgcgcacg ttctccattt tctcggtcgc ctgggcgctt aaggtatgaa taccgcgatg
     5641 caccgccgcg tagccatgac gataaaactc ggcctcggcg tcaatcacct ggctcggttt
     5701 ctgtgcactg gcggcgctgt cgagataagc cagcggcaaa ccgtttacct cacgcgaaag
     5761 caccggaaag tcggcccgca ctttgtcgac ggaaaaagtc atcttgcacc tcctggcagc
     5821 cgttgaccga ttcgggccag cacctgctgt ttaagcccct catcacgcag tgcttccgtc
     5881 agttcggcag caaaggcgta aatgatcatc tgctgggcat cctgctgatt gatcccgcgc
     5941 gagcgcagat agaacatctg ttcatcatca atacgcccca ccgtcgcgcc gtggctgcat
     6001 ttcacatcat ctgcatagat ttccagctgc ggtttcgtat ccacttccgc cagtttgccc
     6061 atcagcagat tattgttggt catctgacca tccgttttga tggcgtgctg cgcgacgttg
     6121 atcaaaccgt taaataccgc gcggcctttg tcgctgacga tagttttgtg caactgtcgg
     6181 ctgttacaaa aacctttatt gtgttccagc caggtacggg tatcacacac ctcgtttttc
     6241 accggcatcg ccaggctatt gatccgcagc gtgctgtttt cgccattgag ttgcgtactg
     6301 gtgttgtgtc gtaacactgc gccacccagc aggaaactat ggctaaatgc ggtggcatcc
     6361 tcagccagca acaaatcgtt atgagcaaag tggtgactga gcgggttttc aaacgccagc
     6421 ttgatatgct gcaagtgggc gttcgctgcg acattgatag tgaaccgtgc cccggtaaaa
     6481 tgacgagcat cattaaggct gacaaaatgt tcgatcaccg ttgcttcggc accttccgcc
     6541 agatccagat gatgccggta atgggcagtg ttcacctctt cacctgccac gccctgggtg
     6601 atatacatta acagcaatgg ctttgccggc cgttgaccgc gcttcacggc gatatgcgtc
     6661 acgctttgtg ccaggctttc cgtcaaatgc agaaacactt ccgcctgaat agcgtcgggt
     6721 aacccctgac ggtcgtcgtt aatgctcact tcatatccgc tgccttcaat tgcatcgctc
     6781 agcgcgggca cgtaacgtcc atcgacaaac accagccgca cggcgtctaa cgttaacgct
     6841 aaggcatcac gctgctgtgg ggatatctcc cccgcaatgc tgacaaactg gctattggtc
     6901 agcccttcca gcgacgtata tttccagttt tcatgtttac gtgtcggcag tccggtacgc
     6961 agcaattgtt gtaaatgctg ctgtgcttgc ggggagcgtt ttgtcccttc agcttcaaac
     7021 aagtgatgcc actgttgcag cgcgttactg ctgttcggta agccagccat aaccctgctc
     7081 ctccagttgt ttgaccaacg tgaaatcgcc ggatttcaca attcgtccct gatatagcac
     7141 atggacgtaa tcaggcttga tgtagtcgag aatgcgttgg tagtgcgtaa caatgatgaa
     7201 tgagcgcttg ccatcacgca gggagttcac gccatcggcg accactttta atgcgtcaat
     7261 atccagcccg gagtccgact catcaagaat gcataactcc ggttccagca ccgccatttg
     7321 caaaatatcg ttgcgctttt tctcgccgcc ggaaaaacca acgtttaccg aacgggttaa
     7381 taaatcttcc ggcatcttca ggagagcgat tttctcttcc atcaaatcct gaaaatcaaa
     7441 gcggtcgagc gtttcctggc cgcgatagct gcgcactgca ttaagtgccg tttgcaggaa
     7501 aaactggtta ctgacgcctg gaatctccac cggatactgg aaggccataa agatgccttc
     7561 gcctgcacga tcttccggcg acagtgcaag caaatctttg cctttgaact caaccgtgcc
     7621 gcccgtcact tcataatctt cgcgcccggc aagcgttgcc gataaggtac ttttgcccga
     7681 accgtttggc cccataatgg cgtgaacttc gccgggacga acggcgaggc ttaatccacg
     7741 caggatagct ttatcttcca cgctgacgtg taaatcttta atacttaaca tgtttattcc
     7801 ttatccgacg ctgtgttcaa gactgatcgc gaggagtttt tgtgcttcaa cggcaaattc
     7861 cagcggcagt tctgagaaca cgtctttgca gaaaccgtta acaatcatcg agatggcgtc
     7921 ttcttcgctg atcccgcgtt gcaggcagta aaacagttga tcttcaccaa tacgtgatgt
     7981 cgttgcctcg tgctccagtt gtgcgctgtt attgcgacat tcgacatacg ggaaggtatg
     8041 cgccccacaa ttagcgccaa tcagcattga gtcgcactga gtgaaattgc gcgcattggt
     8101 tgccgtcggc atgattttca ctaagccgcg ataactgttc tgactatgtc cggcagagat
     8161 ccctttcgag ataatggtcg atttggtgtt tttaccgatg tggatcatct tggtgccggt
     8221 atccgcttgc tgatgaccgc tggtcagcgc cactgagtaa aactcaccaa tggagttatc
     8281 gccgcgcaaa atgcagctgg gatatttcca cgtaatcgcg gacccggttt ctgattgcgt
     8341 ccatgacatt ttgctgtttt cgccttcgca caaagcacgc ttggtgacga agttgagaat
     8401 accgccggtg ttgttatcgc cagggaacca gttttgtacc gtggaatatt tcacctcggc
     8461 gtttttatgg atgatgactt ccaccactgc cgcgtgtaac tgatagctgt cacgcaccgg
     8521 agcggaacag ccttcaatgt agctgacgta gctgtcttcg tcggccacca gaatggtgcg
     8581 ctcaaactgc ccggtttttt ccgcgttaat gcgaaaatag gtggaaagtt ccatcgggca
     8641 gcgcacgcct ttaggcacat aaataaacgt accgtcagag gctaccgccg cattaagcgc
     8701 ggcaaagaag ttgtcattcc ccggcaccac ggtgccgaga tatttacgca ccagttccgg
     8761 gtgatcgtgg atcgcctcac caaaggaaca gaaaataatt ccctgctccg ccagtttttc
     8821 gcgataagta gtggcaaccg aaacagagtc gaaaatggca tccaccgcca cctctttgcc
     8881 ttcccgcacg ggaacgccca actgctcaaa cgccgcctcc acctctttac ttaaaaaggc
     8941 gttcgcgcca gtttgctgca ccgcgccagg ttcagacgcg caagtgtcgt cacaattacc
     9001 gcacgatggt gctgagtagt agctgtaatc ctgataattc agcttgtcgt agtgcgcttt
     9061 caaccagtgc ggttcttcca tctccagcca tgcgcgatag gcgtttagac gaaactccag
     9121 catccactcc ggctcattac gcttcgccga aattgcgcgc accacctctt cgtttatccc
     9181 ctttgccagc tcatcggtgg ctaactgggt gaagaatcct tctttataat tcagcgggcc
     9241 gccggtccag gttttgacat cgtcagttgc ttcagtatta cgagacatag taccgcctat
     9301 accccaaagc tttcgccaca gccacattca ttctgggctt tagggttgtg aaatttgaat
     9361 atctgattaa gtccttcacg aacgaaatcg acttccgtgc catcaataaa cggcatcgct
     9421 tgcagcggga caaacagctt cgcgccgtcg tgttcaaaca gcagatcgtc tttgtccggc
     9481 tcgctaacac tgtcgagcac atagccaaag cccgcgcagc ccgtttgctt cacgcctaaa
     9541 cgcacgccga ccatacccgg ctgctttgcc accagctcac ggatgtgtat cgccgctgcg
     9601 ggtgtcagcg ttaagccttg ccaggcgaaa tcttgtgggt taaaggttcc tgaatgcatg
     9661 tccatcgatt tacctcactt catcgctttc agcgtataac agcatgttgg tgataatgat
     9721 tatcagttca acccagcaaa cgcaggggct ttaccgtaaa acatgctttt tgcctgcttt
     9781 taataagcat agaccctgat gtgtgggtta acaggcacgc taagaattag gtatctcatt
     9841 gttagataat ggttattatc taaggagcat taaggctgtg atgaaaaaga aaaagttgta
     9901 ttaaaatgac tatttaagag ataggtaaaa aagtgcagcg ttcagaaata agaaaaccct
     9961 taagtctgtg cgacacaggc ttaagggttt ctaccccatc cggcgcttat ctccggcact
    10021 ctcagtggct tagctcttga aggggcgata agaataatct cataaagcta acccgccgtt
    10081 ttaacacaaa ctgcgattag tattattttt gaacaatatc aggcggtaga taagcagtat
    10141 taagaaggtc atcgaacctg gacggaggtt aatccaggtc gatttggcga acttgcggca
    10201 ttaagtcagg atcaatgcac gcccagacgc caggcaaagt agatttcttc ttttaattca
    10261 gcagaagaga gagtaagcag gtcagcaaat tcaagttcta gttgtttcag acgtttgaga
    10321 tattgggcag gtgaaagatt gctctggtca cggcgtaaaa attcaatggc cagctgggtg
    10381 ggatcaagtt gagtagacat agcatcctcg cttttagaca agacgtgtac agtataccac
    10441 cgtttactgt gcagataatg accaaaagca atatgcgtca cacttttctg gtgacaacgt
    10501 cacaaaatgg cggtcgtcaa tcgtgacgaa cagcacaaac gccctttctc atcgaagatt
    10561 tcaatctgcc agacctggtg acgcgaaccg agatgcaacg gtttacatat gccgcgcacc
    10621 cgcccttctc gtgccgagcg gacgtgatta gcattgattt ccagaccaac cactttttgc
    10681 tcaccttcgg tacataaata accggcaacg gaaccgatac tttcggccag taccacggat
    10741 gctcctccat gcagcaaccc gaaaggctgc tttgtccgcg agtctactgg cattgtcgct
    10801 tcaagggtgt catcaccaat atgttcaaag cgaatatcca ggaaccccac catgtttcct
    10861 tcacccatag cattcagtgc ttccagggtg attttccgtt tccatatcat ttaataatct
    10921 ccagtaaagc ctgcacagga tggcgtaccc ccgtgccttc aacccgtttt acctggctac
    10981 ggcaggaata tccggtcgcc agacagcggt tacgcggcag tcgctgcata gcctgatgcc
    11041 aggataactc atagatcccg agcgaatttt catggttttt cgcttcatgt ccgtaagtcc
    11101 ctgccatgcc gcagcaaccc acgctgacat tttccagttt cgcgccaaaa cgggcaaata
    11161 tcgcggccca ttgtgctggc gcacccggca aggcggtaac ttcggtacag tgaccaaaga
    11221 aataccatga ttcaccgctg actgtagcca caggctgtga ctcaagtgcg cttgccagcc
    11281 attcattcgc cagtaagacg ttaaactcgc cacgctcctc gcccagcgcc agtttatatt
    11341 catcgcgata acaaagtacc agcgccggat cgacgcccac cattggcata cccagcttcg
    11401 ccatacggtt gaggaaatcc gccgtctttt tcgccgtctt cgcaaaacga ttaagaaaac
    11461 ctttaatatg ctgggctttg ccatttggcg aaaatggcag taacacaggc tggaaaccta
    11521 atttttcgac cagacggaca aaatccgcca ccacttgcgc atcgtaatag ctggtaaagg
    11581 ggtcctgcac caccaacact gtgcgcgctt tctgctctgc attgagagat tcaagctgtt
    11641 ccagcgtcat gtttgccgag cgatgcccca ccatttgttg ttgtagcgag gggaccgaca
    11701 gcagcggcaa atcaaccatg ccgatatgtt tttccgagag tttgcgcacc agcggctggt
    11761 taatgaagaa gttaaaggtt ttcggcgcgc gtgccatcag cggcgcgtag ctctcgaccg
    11821 tagcgacgag gtggtcgcgc agcgggcgta aataacgggt gtgatagagc tgcagaaaac
    11881 gagagcgaaa ctccggcaca tcaattttga tggggcacag ggtcgaacac gctttacagg
    11941 ccagacagcc cgacatcgcc tctttgactt cgtgtgagaa gtcatattcg cctttattcg
    12001 catgccagct attgcgcgtg cgggcaatta acgtccgcaa actgacgccg gattcaggca
    12061 gttcttgttc cagtttgagt ggatcaacgc cgcgatccgc caacaaacgc agccattcac
    12121 gcaccagcgt tgcgcgccct ttcggtgaat gaatccggtt ctgggtgatc ttcatcgacg
    12181 gacacatcgg actacgggca tcaaagttga agcataaacc gttgccgtta cactccatcg
    12241 caccgcgcca ctgctggcgt accgcaatgg ggatctgccg atcgaatgta ccgcgcttca
    12301 ccgcgtccac tttcatcatc ggcgcatcga gaccttctgg cgggcaaatc ttccctgggt
    12361 tgagtcggtt atgcgggtca aatgccgctt tcactttgcg cagttctgca aaaagttcct
    12421 caccgaaaaa cgccgggctg tattcagcgc gaaaaccttt gccgtgctcg ccccacaaca
    12481 aaccaccgta tttcgcagtc agcgccacca cgtcatcaga gatttgcttc atcaaaatct
    12541 cttgttgagg atcgcacata tccagctctg gacggacgtg caagacacct gcgtcgacgt
    12601 gaccgaacat accgtagctt aagccgtggc tgtcgagcag cgcgcgaaat tcagcaatat
    12661 aatccgccag gtgttccggc ggtacgcagg tatcctcagc aaacggaatt ggcttagcgg
    12721 cacctttggc attgccaagc agaccaacgg cttttttgcg cattgcatag atacgttcaa
    12781 cccccgccag ctcacggcac acctgccagc cgatgacacc tgcttgatga ctggcgatca
    12841 gctcatccaa ccgcgcacag agtgcattta cccgctcatc aatcagcgcc tcatcatcac
    12901 cagcaaattc cacaatgttc agcccgagca tctcttggtc aggcacatcg gtaatcaact
    12961 cgctgacgga atgccagaca atatcttccc gcgccagatt cagcactttt gagtccaccg
    13021 tctctaccga aagcgcccgc gcctcaacca taaacggcgc gttacgcagc gcagagtcaa
    13081 aagagtcata tttgacgttc accagacggc gcactttagg caagcgcgta atatccagcc
    13141 gcgcttcggt aataaaggcc agcgtccctt ctgaacccgt cagaatgcgc gtcaggtcga
    13201 actcggtcat ctcatcgtta aagacatgac gcagatcgta accggtaaga aagcggttaa
    13261 gtttggggaa gttgtcgata attaactggc gttgctgacg gcaacgttga taaaccgtgt
    13321 tataaattcg cccgattgtg gtattggatt tacccagcgt ttccgccaat tcgacgggta
    13381 aaggttgcgt atcgagaaca tcgcccccca acaacaccgc gcgtacgcca agtacgtgat
    13441 ctgacgtttt gccatagacc agcgatccct gaccggatgc atcggtattg atcatcccac
    13501 cgagcgttgc ccggttgctg gtcgaaagtt ccggcgcaaa aaagtagccg aacggtttca
    13561 ggtactgatt gagttgatct tttatcaccc cggcctcaac gcgcacccag ccctcttcag
    13621 ggttaatttc gatgatgcgg ttcatatggc gggacatatc aacaataatc ccctggttga
    13681 gcgcctgacc gttagtgccg gtgccgccgc cgcggggggt aaagatcagc gatgaatagc
    13741 gttcctgcgc ggcaagacgg gcgatcagcg ccacatctgc ggttgaacgc ggaaatacca
    13801 ccgcatcggg gagaagttgg taaatactgt tgtcggtcga cattgtcaga cgatcggcat
    13861 aacttgtcgc cgtatcgccg gtaaaacctt gttgctccag ctcttgcaaa aaattaagca
    13921 ccagttgaac gacgccgggt gcctgagaaa tctgtggaat cattatattg cccctttcct
    13981 gcggtctgtg atgtaggtcg atacactatt ctttcaggcg gctgcaatag cgcactgaaa
    14041 ggtgatgttt atttactcta tggatttcga gttgcaggaa ggcggcaagc gagtgaactc
    14101 caggagctta caatagtaag tgactggggt gaacgaacgt agccgcagca catgcaactt
    14161 gaaatacgac gagtaaatcg tttgcgtgtt gcctgagttg ttgtaccaca tttttttcta
    14221 acacgcccat cagaattaag ggcagaatcg gcctgttaaa aaccgctgaa attgctcatc
    14281 attatgcagg tgagtttcgc gtgttcacgt cgcgtcgacg atttgacgca caaaaaaggt
    14341 gaaaagtagt tatggtaaat gttcgtcagc ccagggatgt cgcacaaatt ctgctttcgg
    14401 tgctgttttt agccatcatg attgtggcat gtctgtggat tgttcaaccc tttattctcg
    14461 gctttgcatg ggccggtacg gtggttatcg ccacctggcc ggtattgtta cgtttgcaaa
    14521 agatcatgtt tggccgccgc tctctcgccg ttctggtgat gacgctgtta ttagtgatgg
    14581 tgtttatcat ccctattgct ttgctggtta acagtatcgt cgacggcagc ggcccgctaa
    14641 ttaaagccat ttccagcggc gacatgacgt tacccgatct ggcgtggctt aataccattc
    14701 cggtgattgg cgcgaagctg tatgcaggct ggcacaactt gctggatatg ggggggacgg
    14761 cgatcatggc gaaagtccgc ccttatattg gcaccaccac cacctggttc gttgggcagg
    14821 cggcgcatat cgggcgcttt atggtgcatt gtgcgctgat gcttctcttc agtgccctgc
    14881 tgtactggcg cggtgaacag gtggcacaag gcattcgcca ttttgcaacc cgtctggcag
    14941 gcgttcgcgg agatgccgcc gtactgctgg cggcacaggc tatccgcgcg gtggcgctgg
    15001 gtgtggtggt gacggcgtta gtacaggcag tgcttggcgg tatcggcctc gccgtatccg
    15061 gcgtacctta tgcaacgttg ctaacggtgt taatgatcct ctcctgcctt gtccagcttg
    15121 gcccgttgcc ggtactgatt ccggcgatta tctggctcta ctggactggc gataccacct
    15181 ggggaacggt attgttagtg tggagcggtg tggttggcac gctggataac gtcatccgcc
    15241 caatgttaat tcgcatgggt gccgatttac cgctgatcct gatcctctct ggtgttattg
    15301 gtggtttgat tgctttcggg atgatcggtc tgtttattgg tccggttctg ttagccgttt
    15361 cctggcgtct gtttgccgcg tgggtggaag aagtcccgcc gccgacggac caaccggaag
    15421 aaattctcga agaacttggc gaaatcgaga aaccgaataa gtaatttctc atcaggcggc
    15481 tctgccgcct gattgttaac ccccgctaat tgatatttgc ttgctcttcc ccatattttc
    15541 ctgcttaccg ccattcagct ggtagtacct gtcgcaaatt ctttacagtt tttaaactaa
    15601 tgagacgaat ctgatcgacg caaaaagtcc gtatgcctac tattagctca cggttataaa
    15661 tcaacatatt gatttataag catggaaatc ccctgagtga aacaacgaat tgctgtgtgt
    15721 agtctttgcc catctcccac gatgggcttt tttttaacat ttttccactt cgctacctcg
    15781 cccctcactc tttccaataa tgttgcacaa gatactgtga ctctcttcaa gccgtcagca
    15841 ggctgataat gttatttata ttttattgtt tatttcatgc agccattaca cgatgaacgc
    15901 ttatgaactc caggcactcc gacatatttt tgccatgact attgatgaat gcgcacctgg
    15961 attgcccaga ccggtgacag tgaaagctgg cgtcagtggg aaaatggcaa gtgtgccatt
    16021 cctgatcgtg tagtcgagca actgttggct atgcgtcagc aaagaaaaaa acatcttcat
    16081 gccatcatag agaaaataaa taaccgcatc ggcaacaaca ccatgcgttt tttccccgac
    16141 ttaaccgcat ttcaacgagt ctaccctgat ggcaatttta ttgactggaa gatctatcaa
    16201 tcggtagccg ctgaaggtaa tgctgttgaa aagcaaattc cccagccagt tggtggacgc
    16261 cagcgtagct aatgaattac cgcaaatgaa cagcaaaccg ttagtctggc tggaaggtgt
    16321 ttcatcggta ctgttcggtg tagccgcatt ctcgaccttt tatgtgattg tggtgtggat
    16381 gcccaaatat gcgatggctt ttgctggtat gtcagaagct gaggcattaa aaaccatctc
    16441 ttattacagt atgggctcgt tggtctgtgt ctttattttt gccgcactac tgaaaaaaat
    16501 ggtccggccc atctgggcta atgtatttaa ctctgcactg gcaacaataa cagcagccat
    16561 tatctatctg tacccttctc cactggtgtg taatgccggc gcctttgtta tcggtttctc
    16621 agcagctggc ggcattttac agctcggtgt ttcggtcatg tcagagtttt tcccaaaaag
    16681 caaagccaaa gtcaccagta tttatatgat gatgggtgga ctggctaact ttgttattcc
    16741 gctgattacc ggttatctgt cgaacatcgg ccttcaatat atcattgttc tcgattttac
    16801 tttcgcgctg ctggccctga ttaccgcaat tattgttttt atccgctatt accgcgtttt
    16861 tattattcct gagaatgatg tgcggtttgg cgagcgtaaa tttagcaccc ggttaaacac
    16921 aattaagcat agaggttaaa ggagttaatt atggatgtta ccgcaaaata cgaattgatt
    16981 gggctggtgg cctatcctat ccgccacagt ttatcgcctg aaatgcagaa taaagcctta
    17041 gaaaaagcgg gattgccatt tacctatatg gcctttgaag tggataacga tagttttccc
    17101 ggagcaattg aaggattaaa agctctaaaa atgcgcggaa ctggtgtatc aatgccgaac
    17161 aaacaactgg cttgttaata tgttgatgaa ttaacgccag cagccaaact ggtgggtgcc
    17221 atcaacacca tcgttaatga tgatggctac ctgcgcggct ataacaccga cggcacgggc
    17281 catattcgcg ccattaaaga gagcggtttt gatatcaaag gcaaaacaat ggtgctgtta
    17341 ggggccggag gtgcctcaac ggctattggc gcgcaggggg caattgaagg tttaaaagaa
    17401 attaaactct ttaaccgtcg ggatgagttc ttcgataaag ccctcgcctt cgcgcagcgg
    17461 gttaacgaaa acaccgattg tgtcgtcacg gttaccgatc tcgccgatca gcaagccttt
    17521 gctgaagccc tggcttccgc cgacatttta accaatggca caaaagtggg tatgaaaccc
    17581 cttgagaatg aatcattagt taatgatatc agtctgttac atccgggact tctggtcact
    17641 gaatgcgtgt ataacccgca tatgacgaag ttattgcagc aggcgcaaca agctggttgc
    17701 aaaacgattg atggatacgg catgttgttg tggcaagggg ctgaacagtt cacgttatgg
    17761 actggcaaag atttccctct ggaatatgtt aaacaggtca tggggttcgg tgcctgacag
    17821 gctgaccgcg tgcagaaagg gtaaaaaaat gaaaaccgta actgtaaaag atctcgtcat
    17881 tggtacgggc gcacctaaaa tcatcgtctc gctgatggcg aaagatatcg cccgcgtgaa
    17941 atccgaagct ctcgcctatc gtgaagcgga ctttgatatt ctggaatggc gtgtggacca
    18001 ctttgccgac ctctccaatg tggagtctgt catggcggcg gcaaaaattc tccgcgaaac
    18061 catgccagaa aaaccgctgc tgtttacctt ccgcagtgcc aaagaaggcg gcgagcaggc
    18121 gatttccacc gaggcttata ttgctctcaa tcgtgcagcc atcgacagcg gcctggttga
    18181 tatgatagat ctggagttat ttaccggcga tgatcaggtt aaagaaaccg tcgcctgcgc
    18241 ccacgcgcat gatgtgaaag ttgtcatgtc caaccatgac ttccataaaa cgccggaagc
    18301 cgaagaaatc attgcccgtc tgcgcaaaat gcagtccttc gacgccgata ttcctaagat
    18361 tgcgctgatg ccgcaaagta ccagcgatgt gctgacgttg cttgccgcga ccctggagat
    18421 gcaggagcag tatgccgatc gtccaatcat cacaatgtca atggcaaaaa ctggcgtaat
    18481 ttctcgtctg gctggtgaag tatttggctc ggcggcaact tttggtgcgg taaaaaaagc
    18541 ctctgcgcca gggcaaatct cggtaaatga tttacgcaca gtattaacta ttttacatca
    18601 ggcataagca ataatatttc ggcgggaata tcctcccccg ccgaactaaa aaaaatatat
    18661 tcaaccgtat ttaataaaaa tatttcgtga gtctctgtgc gctaaatatc catctggcgt
    18721 agggaaaatc acacctgaat cagaaattaa caatgaaacc tgtaaaacca cctcgtatta
    18781 atggacgagt gccggtcctg tcggcacagg aagcggtgaa ttatattccc gacgaagcaa
    18841 cactttgtgt gttaggcgct ggcggcggta ttctggaagc cacgacgtta attactgctc
    18901 ttgctgataa atataaacag actcaaacgc cacgtaattt atcgattatt agtccaacag
    18961 ggcttggcga tcgcgccgac cgtggtatta gtccgctggc gcaagaaggt ctggtgaaat
    19021 gggcattatg tggtcactgg ggacaatcgc cgcgtatttc tgaactcgca gaacaaaata
    19081 aaattattgc ttataactat ccacaaggtg tacttacaca aaccttacgc gccgccgcag
    19141 cccaccagcc tggtattatt agtgatattg gcatcgggac atttgtcgat ccacgccagc
    19201 aaggcggcaa actgaatgaa gtcacgaaag aagacctgat taaactggtc gagtttgata
    19261 acaaagaata tctctattac aaagcgattg cgccagatat cgccttcatt cgcgctacca
    19321 cctgcgacag tgaaggctac gccacttttg aagatgaggt gatgtatctc gacgcattgg
    19381 ttattgccca ggcggtgcac aataacggcg gtattgtgat gatgcaggtg cagaaaatgg
    19441 ttaagaaagc cacgctgcat cctaaatctg tccgtattcc gggttatctg gtggatattg
    19501 tggtggtcga tccggatcaa agccaactgt atggcggtgc gccggttaac cgctttattt
    19561 ctggtgactt cacccttgat gacagcacca aacttagcct gcccctaaac caacgtaaat
    19621 tagttgcgag gcgtgcatta ttcgaaatgc gtaaaggcgc ggtggggaat gtcggcgtcg
    19681 gtattgctga cggtattggc ctggtcgccc gggaagaagg ttgtgctgat gactttattc
    19741 tgacggtaga aacaggtccg attggcggaa ttacttcaca ggggatcgcc tttggcgcga
    19801 acgtgaatac ccgtgccatt ctggatatga cgtcccagtt taatttttat cacggtggtg
    19861 gtctggatgt ttgttatttg agttttgctg aagtcgacca gcacggtaac gtcggcgtgc
    19921 ataaattcaa tggcaaaatc atgggtaccg gtggatttat tgatatcagt gccacctcga
    19981 agaaaattat tttctgcggc acgttaaccg cgggcagttt aaaaacagaa attgccgatg
    20041 gcaaattaaa tatcgtccag gaaggacggg tgaagaaatt tattcaggaa ctaccggaaa
    20101 ttacttttag cggaaaaatc gcgctcgaac gggaactgga tgttcgttac atcaccgaac
    20161 gtgctgtatt cacgctgaaa gaagacggcc tgcatttaat cgaaatcgcc cctggcgtcg
    20221 atttacaaaa agatattctc gacaaaatgg atttcacccc agtgatttcg ccagaactca
    20281 aactgatgga cgaaagatta tttatcgatg cggcgatggg ttttgtcctg cctgaagcgg
    20341 ctcattaaca ggagtatcac gatggatttt tctttaactg aagaacaaga actgctgctg
    20401 gccagtattc gcgaactgat tacgactaac tttgcggaag agtatttccg cacctgcgat
    20461 caaaacggga catatccgcg tgagtttatg cgggcgctgg cggataacgg catttctatg
    20521 cttggcgtgc cggaagagtt cggtggcatc cctgcggatt acgtcaccca gatgctggcg
    20581 ctgatggaag tgtcaaaatg cggtgctccg gcatttttga ttaccaacgg tcaatgtatt
    20641 cacagtatgc gccgtttcgg ttctgcagag cagctacgta aaacggcaga gagcaccctg
    20701 gaaacgggtg atcccgccta tgccctggcg ttgacggagc caggcgcagg ctcagacaac
    20761 aacagtgcca ctaccactta cacgcgtaaa aacggcaagg tttacatcaa cggacagaaa
    20821 acctttatta ccggtgcgaa agagtacccg tatatgctgg tgttggcgcg cgatccgcaa
    20881 ccgaaagatc ccaaaaaagc cttcaccctg tggtgggtcg actccagtaa gcccggcatt
    20941 aagattaacc cgctgcataa aatcggctgg catatgctca gcacctgcga agtctatctc
    21001 gacaacgtgg aggttgaaga gagcgacatg gtgggcgaag aaggaatggg tttcctcaat
    21061 gtgatgtaca actttgagat ggagcgcctg atcaacgccg cgcgcagcac cggctttgcc
    21121 gaatgcgcct ttgaagatgc cgcccgctat gccaaccaac gtatcgcttt tggtaagccc
    21181 attggtcata accagatgat ccaggaaaaa ctggcgctga tggcgattaa gatcgacaac
    21241 atgcgcaaca tggtgctgaa agtggcatgg caagccgatc agcatcagtc actgcgcacc
    21301 agcgcggcgc tggcaaaact gtattgcgca cgtaccgcaa tggaagtcat tgatgatgcg
    21361 attcaaatca tgggcggtct gggctatacc gatgaagcgc gcgtctcccg cttctggcgt
    21421 gatgtccgtt gtgaacgtat cggcggcggt acagacgaaa ttatgattta cgtagcaggt
    21481 cggcagatcc tgaaagacta tcagaacaaa taatctgcag gcggcgcagc ttcttaacaa
    21541 actgcgccgc cagatttatc caacaagact taccggttga ggaaattcag ataggatttc
    21601 ttgttccgca aaacagtttt taaattgtct acggtaatcg ctgggcgaac aaccgacatg
    21661 gcgcaaaaac agtttggcaa agtgatcgac attttcataa cccacacgcc aggagatctc
    21721 tgcctgtgat aattcagtat tagtgagtga ccattttgct tccgtcatac gccgttgaat
    21781 aacatagtta ataggggaaa tacgatactc tttggtaaat tcatggcaaa tataactgac
    21841 gctggcacga aattttttcg ataactgttc taaagtgatt ttttcgcgat aattattact
    21901 cagatagaaa agaatatctt ttatcagaac atctttttta atatacccct gctccgaacg
    21961 ataagcattt ttaaaatttt cgtagtaaag aatggctaac gtataggcaa atgcatccca
    22021 taacgaagat gtttggctat ttttactttg cggcaaaatc acacttagct cattaaataa
    22081 ggtttttatg acttcttttc cctgccccgc ggcaattacc ggacaagaat gcggttgcag
    22141 tagctgattt tcctcagccc cctgaaactg aaagccgtac agcgcacagg tacacgtcgt
    22201 tgccggatcg ttaacgtcag aggccaccgc atgcagcctg ccgcgttcta tcaccacaat
    22261 gtcatccgca tgtgcgacat ataacgaaga atcgatggta aaccttgcaa cccctttctt
    22321 gacgtaaatc aactcggttt cattgtcatg aacgtgatgt ccggactccc attttggatc
    22381 atcgctaaat gcaaaacgtg aaagccgtgg cgttttaccg gcgacaaaca gcgtttcact
    22441 ggcgttatca aaacagcgtt gatacatgac aacctcccta ttccatgagc aagcaaaaac
    22501 aatatatgcc ggataaaata cggcgtgtat tgcggttata caaccgcgtt tagcgagagc
    22561 taaacaagat tatttacact gaatgcaaga ttgtacggtc atggaataac tatattgccg
    22621 caaattgcac ttttgtttta gcgatcgcat ttttttgcaa gattgttggc aaggaaaaca
    22681 gcttgctccg tcgaaaaccc ccaccgctat cgcacactat tttcaggcca tttttacctt
    22741 ccatcggaga tggttccgta tgcgactcac aggagaaatc atgaaaataa taacctgctt
    22801 taagctggtg cctgaagaac aggacattgt tgtcactcca gaatacaccc tgaatttcga
    22861 caatgccgac gccaaaatca gccagttcga tctcaatgcc attgaagctg caagccagct
    22921 cgcaacagat gacgatgaga tagccgcgct gaccgttggc ggctcattgt tgcagaactc
    22981 gaaagtgcgc agtgcgcaaa gatgtgctat cccgcgggcc gcacagcctg tatttggtgc
    23041 aggatgcgca acttgaacat gcactgcctc tcgataccgc aaaagcgctg gcggcagcaa
    23101 ttgaaaagat cggcttcgat ttactgatct ttggtgaagg ttccggcgac ctttatgccc
    23161 agcaggttgg cttgctggtc ggagaaattc tgcaacttcc ggtgattaat gcagtgagtg
    23221 ctattcagcg tcagggtaat acactggtga ttgaacgcac gcttgaagat gatgttgaag
    23281 ttattgaact ctctgttcca gccgtgctct gcgtcacctc cgatattaac gtgccacgca
    23341 ttccttcgat gaaagccatt ctcggcgcgg gtaaaaaacc ggtaaatcag tggcaggcaa
    23401 gtgatattga ctggagccag agcgcgccac ttgctgaact ggtcggcatt cgcgtaccgc
    23461 cgcaaacaga acgtaagcac atcattatcg ataacgattc gccggaggcc attgccgagc
    23521 tggcggaaca tctgaagaaa gccctgaact gaagcctacg gagaagaaac gatgagtcaa
    23581 ttaaacagcg tctgggtctt tagcgataat cctgaacgtt atgctgaact gtttggcggc
    23641 gctcagcaat ggggccaaca ggtgtatgcc attgtacaaa ataccgacca ggcgcaggca
    23701 gttatgcctt atggtccaaa atgtatttat gttcttgagc aaaacgacgc gctgcaacgc
    23761 actgaaaatt acgccgaaag cattgctgcc ccgctgaaag ataaacaccc cgctatgttg
    23821 ctgttggtcg cgacgaaacg tggtaaagct ctggcagcac ggttaagtgt gcaactgaat
    23881 gcggcgctgg tgaacgatgc cacggcggtg gatattgtcg atggtcacat ttgcgccgaa
    23941 caccggatgt atggcgggtt agcgttcgct caggaaaaga tcaacagccc gctggcgatc
    24001 attacccttg cacccggtgt tcaggaaccg tgcaccagtg atacctctca tcagtgcccg
    24061 acagaaacgg taccttatgt tgctccgcgt catgaaattc tctgtcgcga acgccgtgcg
    24121 aaagccgcaa gcagcgtgga cctgagcaaa gcaaaacgtg tggttggcgt cggtcgtggt
    24181 ctggcggcgc aggatgacct gaaaatggtc cacgaactgg cggcggtgct gaatgctgaa
    24241 gtcggctgtt cacgtccaat tgccgaaggc gagaactgga tggagcgtga acgttatatc
    24301 ggtgtctccg gcgtgttgct gaaatccgat ctctacctga cgctggggat ctccgggcag
    24361 atccagcata tggttggcgg caacggcgca aaagtgattg tcgccatcaa taaagataaa
    24421 aatgcgccaa tcttcaatta tgccgactac ggtctggtgg gcgatatcta caaagtcgtc
    24481 cctgccctga ttagccagtt gagccgctaa ttcccctttc aaccacatct cccgctgtaa
    24541 acgcagcggg aagggagcat aacgcatgtc ggatgacaaa tttgatgcca ttgtggtcgg
    24601 tgcggacgtt gctagtagcg ttgccgcact ggtcatggcg cgagccggac tggatgtcct
    24661 ggtgatagaa cgcggcgaca gtgccggatg taaaaacatg accggcgggc gtctttatgc
    24721 ccacacactt gaagcaatca ttccaggctt tgcagtatca gcgccggtag aacgcaaggt
    24781 cacacgcgag aaaatctcct tcttaaccga agaaagcgcc gttaccctcg attttcaccg
    24841 cgagcaacca gatgttccgc aacacgcatc ttataccgta ttgcgtaatc gtctggaccc
    24901 gtggttgatg gaacaagccg agcaggcggg cgcacagttt atcccgggcg ttcgcgtcga
    24961 tgcgttggtt cgtgaaggaa acaaggtcac tggcgtgcag gccggggatg atattctcca
    25021 agcgaatgtg gtggttctag ctgatggcgt aaactcgatg cttggccgct cgctgggaat
    25081 ggttcccgct tccgatccgc atcattacgc tgttggtgtt aaagaggtta ttggcctcac
    25141 accagaacag atcaacgatc gctttaatat tacgggcgag gaaggtgccg cctggctgtt
    25201 tgccggctcc ccttctgacg gcctgatggg cgggggattt ctctatacca acaaggattc
    25261 catatccttg gggctggttt gtggattggg tgatatcgcc catgcgcaaa aaagcgtgcc
    25321 gcaaatgctg gaagatttta aacaacaccc cgccattcgc ccactaatta gcggcggcaa
    25381 actgcttgaa tattccgcgc atatggtgcc agaaggcggt ctggcaatgg tgccgcagat
    25441 ggttaacgat ggcgtgatga tcgttggtga cgccgcaggc ttctgcctga atttgggttt
    25501 tacagttcgt ggcatggatt tagccattgc atcggctcag gctgccgcca caacggtgat
    25561 cgccgccaaa gaacgcgagg atttctccgc cagcagtctg gcgcaataca aacgtgagct
    25621 ggaacaaagc tgcgtcatgc gcgatatgca gcatttccgc aagatcccgg cgctgatgga
    25681 aaacccgcgc ctgtttagcc aatactcacg aatggtcgcc gacatcatga acgagatgtt
    25741 caccattgac ggcaaaccaa accagccggt acgcaaaatg atcatgggac acgcgaagaa
    25801 aattgggctg atcaacttgc tgaaagatgg cattaaggga gcaaccgcgc tatgagccag
    25861 aacgctacgg ttaacgtcga catcaaatta ggcgtcaata aattccatgt tgatgagggc
    25921 cacccgcata tcattctggc ggcaaatccc gatatcaatg aattccgtaa attaatgaaa
    25981 gcttgccctg ccggacttta taagcaggat gacgccggca acattcattt cgattccgcc
    26041 ggttgtctgg agtgcggcac ctgtcgggtg ctgtgcggca acactattct cgaacagtgg
    26101 caatatcccg caggcacctt cggtattgat tttcgctacg gctaatcatg catcccacag
    26161 gcccgcatct cgggcctgat gttctgtttc gagagtccaa aatgaaagtg acattaacgt
    26221 tcaacgaaca acgtcgtgcg gcgtatcgtc agcaagggtt atggggcgat gcttcactgg
    26281 ccgattactg gcagcagacc gctcgtgcga tgccagacaa aattgccgtg gtcgacaatc
    26341 atggtgcaac gtacacctat agcgcgctcg atcacgccgc gagctgtctg gcaaactgga
    26401 tgttagcgaa gggtattgaa tcaggcgatc gcatcgcatt tcaactgcct ggctggtgtg
    26461 aatttaccgt tatctatctt gcctgcctga aaatcggtgc ggtttccgtg ccgctgttgc
    26521 cttcctggcg ggaagcagaa ctggtgtcgg tgctcaataa gtgtcaggca aaaatgttct
    26581 ttgcaccgac gttgtttaaa caaacacgtc cggtagattt aatcctgccg ctgcaaaatc
    26641 agcttccaca actacaacaa attgtcggcg tggacaaact ggctcccgcc acctcttccc
    26701 tctcattaag tccgattatc gccgacaata cctcactgac cacggcgata acgacccacg
    26761 gcgatgaatt agctgcggtg ctgtttacct ccggaaccga gggtctgcca aagggcgtga
    26821 tgctaacgca taacaatatt ctcgccagtg agcgggctta ttgcgcgcga ctgaatctga
    26881 cctggcagga tgtctttatg atgcctgcgc cacttggtca cgcaacgggc tttctgcatg
    26941 gcgtaacggc accattctta attggcgctc gcagcgtgtt gttagatatt ttcactcctg
    27001 atgcgtgtct cgcgctgctt gagcagcagc gttgcacctg tatgctaggc gcaacgccgt
    27061 ttgtctatga tcttttgaat gtactagaga aacaacccgc ggacctttca gcgctgcgtt
    27121 tctttctttg cggcggtacc acaatcccca aaaaagtggc acgtgaatgc cagcagcgcg
    27181 gcattaaatt attaagtgtt tatggttcca cagaaagttc gccgcatgcg gtggtgaatc
    27241 tcgatgatcc tttgtcgcgc tttatgcaca ccgatggtta cgctgccgca ggtgtagaga
    27301 ttaaagtggt cgatgacgca cgcaagacct taccgccagg ttgcgaaggt gaagaagcct
    27361 cgcgtggccc caatgtgttt atggggtatt ttgatgaacc tgaattaacc gcccgtgcgc
    27421 tggacgaaga aggctggtat tgcagcggcg atctctgccg tatggatgag gctggctata
    27481 taaaaattac cggacgcaaa aaagatatta ttgtccgcgg cggcgaaaat attagcagcc
    27541 gtgaagtgga agatatttta ttgcagcatc ctaaaattca cgatgcctgt gtggttgcaa
    27601 tgcccgatga acgtttaggt gaacgatcat gcgcttatgt cgtgctgaaa gcgccgcatc
    27661 attcattatc gctgga
//
LOCUS       DADKRT010000035        27527 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.035, whole genome shotgun sequence.
ACCESSION   DADKRT010000035 DADKRT010000000
VERSION     DADKRT010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27527
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.035"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(174..704)
                     /gene="ppa"
                     /locus_tag="JQ356_001279"
     CDS             complement(174..704)
                     /gene="ppa"
                     /locus_tag="JQ356_001279"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HAY4621428.1"
                     /translation="MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
                     DAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAE
                     AAKAEIVASFERAKNK"
     gene            1014..1970
                     /gene="ytfQ"
                     /locus_tag="JQ356_001280"
     CDS             1014..1970
                     /gene="ytfQ"
                     /locus_tag="JQ356_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactofuranose ABC transporter
                     substrate-binding protein YtfQ"
                     /protein_id="HAY4621429.1"
                     /translation="MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNV
                     AKSEAEKRGITLKIADGQQKQENRIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
                     AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
                     ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYA
                     HNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPA
                     FDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY"
     gene            2110..2646
                     /locus_tag="JQ356_001281"
     CDS             2110..2646
                     /locus_tag="JQ356_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000205831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY4621430.1"
                     /translation="MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGEN
                     GAGKSTLIKALTGVYHADRGTIWLEGQVISPKNTAHAQQLGIGTVYQEVNLLPNMSVA
                     DNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAI
                     DLSAKVLILDEPTASLDT"
     gene            2650..3612
                     /locus_tag="JQ356_001282"
     CDS             2650..3612
                     /locus_tag="JQ356_001282"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY4621431.1"
                     /translation="MELLFGLMRQLRDRGVSLIFVTHFLDQSYQVSDRITVLRNGSFV
                     GCRETRELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLE
                     VRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFC
                     PEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQ
                     PIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALL
                     VISSELEELVGYADRVIIMRDRKQVAEIRLAELSVPAIMNAIAA"
     gene            3626..4648
                     /locus_tag="JQ356_001283"
     CDS             3626..4648
                     /locus_tag="JQ356_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4621432.1"
                     /translation="MPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQV
                     VLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVA
                     EVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
                     FNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAG
                     VNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMG
                     GRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGV
                     RSRDKT"
     gene            4635..5630
                     /gene="yjfF"
                     /locus_tag="JQ356_001284"
     CDS             4635..5630
                     /gene="yjfF"
                     /locus_tag="JQ356_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease YjfF"
                     /protein_id="HAY4621433.1"
                     /translation="MIKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAF
                     LGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFG
                     AFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGG
                     RLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLST
                     GLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQG
                     LIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQR"
     gene            complement(5663..6661)
                     /gene="fbp"
                     /locus_tag="JQ356_001285"
     CDS             complement(5663..6661)
                     /gene="fbp"
                     /locus_tag="JQ356_001285"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HAY4621434.1"
                     /translation="MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA"
     gene            6837..8210
                     /gene="mpl"
                     /locus_tag="JQ356_001286"
     CDS             6837..8210
                     /gene="mpl"
                     /locus_tag="JQ356_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HAY4621435.1"
                     /translation="MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEK
                     QGIELIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLV
                     GEHNMHNGLMAIAAARHVGVAPADTANALGSFINARRRLELRGEANGVTVYDDFAHHP
                     TAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHI
                     PWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA
                     KKAEAAQ"
     gene            complement(8293..8844)
                     /locus_tag="JQ356_001287"
     CDS             complement(8293..8844)
                     /locus_tag="JQ356_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HAY4621436.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     EIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAENEE"
     gene            8938..10290
                     /gene="pmbA"
                     /locus_tag="JQ356_001288"
     CDS             8938..10290
                     /gene="pmbA"
                     /locus_tag="JQ356_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HAY4621437.1"
                     /translation="MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEG
                     GSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQT
                     PEWVGVDCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFL
                     LDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            10474..10860
                     /gene="cybC"
                     /locus_tag="JQ356_001289"
     CDS             10474..10860
                     /gene="cybC"
                     /locus_tag="JQ356_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313240.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HAY4621438.1"
                     /translation="MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADN
                     AAQVKDALTKMRAAALDAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLAN
                     EGKVKEAQAAAEQLKTTRNAYHQKYR"
     gene            complement(10905..11369)
                     /gene="nrdG"
                     /locus_tag="JQ356_001290"
     CDS             complement(10905..11369)
                     /gene="nrdG"
                     /locus_tag="JQ356_001290"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HAY4621439.1"
                     /translation="MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSG
                     QPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIW
                     VWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR"
     gene            complement(11468..13606)
                     /gene="nrdD"
                     /locus_tag="JQ356_001291"
     CDS             complement(11468..13606)
                     /gene="nrdD"
                     /locus_tag="JQ356_001291"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004128226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HAY4621440.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA
                     VVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI
                     RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI
                     RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY
                     DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYSNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            complement(14000..15655)
                     /gene="treC"
                     /locus_tag="JQ356_001292"
     CDS             complement(14000..15655)
                     /gene="treC"
                     /locus_tag="JQ356_001292"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HAY4621441.1"
                     /translation="MTNPPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHK
                     LGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMV
                     FNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYY
                     LHLFAPEQADLNWENPAVRAVLKKVCEFWADRGVDGLRLDVVNLISKDPRFPDDLDGD
                     GRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFN
                     FHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFG
                     DEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELR
                     NDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALA
                     DDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSRE
                     IQPWQPGQMRGNWQLVMHNYEEASPQPCAMNLRPFEAVWWLQK"
     gene            complement(15705..17126)
                     /gene="treB"
                     /locus_tag="JQ356_001293"
     CDS             complement(15705..17126)
                     /gene="treB"
                     /locus_tag="JQ356_001293"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HAY4621442.1"
                     /translation="MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANAR
                     PKEIEQLPMVKGCFTNARQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMK
                     WHEQLISHFAETFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFL
                     WLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDF
                     GMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHA
                     LIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQ
                     SMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGIN
                     LKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPNYWQVFALAMAIAI
                     IIPIVLTSFIYQRKYRLGTLDIV"
     gene            complement(17227..18192)
                     /gene="treR"
                     /locus_tag="JQ356_001294"
     CDS             complement(17227..18192)
                     /gene="treR"
                     /locus_tag="JQ356_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001181347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HAY4621443.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPEFYEQGYDPIMMESQF
                     SPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDE
                     GAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAM
                     KQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPE
                     IVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLSRSFPER"
     gene            18377..18430
                     /gene="mgtL"
                     /locus_tag="JQ356_001295"
     CDS             18377..18430
                     /gene="mgtL"
                     /locus_tag="JQ356_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_003933616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HAY4621444.1"
                     /translation="MEPDPTPLPRRRLKLFR"
     gene            18571..21267
                     /gene="mgtA"
                     /locus_tag="JQ356_001296"
     CDS             18571..21267
                     /gene="mgtA"
                     /locus_tag="JQ356_001296"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HAY4621445.1"
                     /translation="MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLK
                     MAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQLSPWWVHLWVCYRNPFN
                     ILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL
                     RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLP
                     VEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQES
                     EPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLP
                     MIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS
                     GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR
                     RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQ
                     GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK
                     ILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKER
                     IVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLE
                     EGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVS
                     QVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET
                     QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPL
                     ASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(21473..21859)
                     /gene="ridA"
                     /locus_tag="JQ356_001297"
     CDS             complement(21473..21859)
                     /gene="ridA"
                     /locus_tag="JQ356_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HAY4621446.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA
                     DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYETFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAIRR"
     gene            complement(21932..22393)
                     /gene="pyrI"
                     /locus_tag="JQ356_001298"
     CDS             complement(21932..22393)
                     /gene="pyrI"
                     /locus_tag="JQ356_001298"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HAY4621447.1"
                     /translation="MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPER
                     IDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN"
     gene            complement(22406..23341)
                     /gene="pyrB"
                     /locus_tag="JQ356_001299"
     CDS             complement(22406..23341)
                     /gene="pyrB"
                     /locus_tag="JQ356_001299"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HAY4621448.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAM
                     VGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEE
                     VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT
                     DVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL"
     gene            complement(23345..23479)
                     /gene="pyrL"
                     /locus_tag="JQ356_001300"
     CDS             complement(23345..23479)
                     /gene="pyrL"
                     /locus_tag="JQ356_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HAY4621449.1"
                     /translation="MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
                     "
     gene            complement(23759..24154)
                     /locus_tag="JQ356_001301"
     CDS             complement(23759..24154)
                     /locus_tag="JQ356_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY4621450.1"
                     /translation="MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGT
                     PEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPEKQFEDIMTVKNEIFSAP
                     SYPTWTAVGVTWLAGFDFEIKVIARIPEL"
     gene            complement(24285..24998)
                     /gene="bdcA"
                     /locus_tag="JQ356_001302"
     CDS             complement(24285..24998)
                     /gene="bdcA"
                     /locus_tag="JQ356_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY4621451.1"
                     /translation="MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA
                     ERLAQETGATAVFTDSADKDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRL
                     FKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
                     ARDFGPRGITINVVQPGPIDTDANPANGPMRDMSHSFMAIKRHGQPEEVAGMVAWLAG
                     PEASFVTGAMHTIDGAFGA"
     gene            25069..25662
                     /locus_tag="JQ356_001303"
     CDS             25069..25662
                     /locus_tag="JQ356_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY4621452.1"
                     /translation="MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTD
                     YLGINPPSLYAAFGNKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLAEVLKEAAR
                     RYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFM
                     STVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE"
     gene            25807..26259
                     /locus_tag="JQ356_001304"
     CDS             25807..26259
                     /locus_tag="JQ356_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY4621453.1"
                     /translation="MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRL
                     FYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAF
                     LPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA"
     gene            26382..27527
                     /locus_tag="JQ356_001305"
                     /pseudo
     CDS             26382..27527
                     /locus_tag="JQ356_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313257.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
BASE COUNT         6604 a         6814 c         7279 g         6830 t
ORIGIN      
        1 tccagcaagt ggctatgaac agcaaaatgg tggtcgggtt tgcttgttct taccgttcaa
       61 gccttgcaac cgctgagaat aatgatggtg gaatagagag tttatttatc gcgggcataa
      121 aaaaaccctt actaaccgaa gcccggcgtt cagggttatt gcgctagaag aacttattta
      181 ttctttgcgc gctcgaagga agcaacgatt tcagctttag cggcttctgc gttttcccaa
      241 ccttcaactt tcacccactt gcctttttcg aggtctttgt agtgctcgaa gaagtgagcg
      301 atttgcgctt tcagcagttc aggcagatcg tttacgtctt taatgtgatc gtattctttg
      361 ctcagcttgc tgtgcggaac cgcaaccagt ttcgcatctt caccggcttc gtcggtcatt
      421 ttcagaacgc caaccggacg gcaacggatc acagaaccag gctgcagcgg gtacggagtc
      481 gggaccagta cgtcaaccgg gtcaccgtcc agagacaggg tgtggttgat gtaaccgtag
      541 ttgcacggat agaacatcgc ggtggacatg aagcggtcaa cgaacagtgc gccgctctct
      601 ttgtcgattt cgtatttgat cggatctgcg ttagccggga tctcaataac aacgtagatg
      661 tcttccggca gatctttacc cgcagggacg ttgagtaagc tcatgtctgt ttcctttaaa
      721 aatatgtggc aaacaagtgc cgagtattat agccaactcg cgccgaatgt ctttgcttgt
      781 tttcgtcttc attttccttt ttcgccagtt ttaagacggt atacagagca ggaaaatcca
      841 taaccgtagc cgcatttttc atagtgagat gaaagcgatt acaaacttgt gattaacgtt
      901 ttatttactt ttttgaagtg tgatgtaacg caatccgtta cataacgaat tgtctatagt
      961 tttttcgcga acatcttttc accaataata attaccccga cgaggacaac cctatgtgga
     1021 aacgcttact tgtagtctct gcagtctcgg cagccatgtc gtctatggcg ttggccgctc
     1081 cattaaccgt aggattttcg caggtcggat cggaatccgg ctggcgcgcc gcagaaacca
     1141 atgtggcgaa aagtgaggcc gaaaaacgcg gaattacgtt gaaaattgcc gatggtcagc
     1201 aaaagcagga aaaccggatt aaagcggtac gttccttcgt tgcacaaggg gtggatgcga
     1261 tctttatcgc tccagtggtt gcgacgggtt gggaaccggt attaaaagag gcgaaagatg
     1321 ccgaaatccc ggtcttcttg ctcgaccgtt ccatcgatgt gaaagacaaa tctctctata
     1381 tgaccaccgt tactgccgac aacatcctcg aaggtaagtt gatcggtgac tggctggtaa
     1441 aagaagtgaa tggcaaacca tgcaacgtgg tggagctgca gggcaccgtt ggggccagcg
     1501 tcgccattga ccgtaagaaa ggctttgccg aagccattaa gaatgcgcca aatatcaaaa
     1561 ttatccgctc gcagtcaggt gacttcaccc gcagtaaagg caaagaagtc atggagagct
     1621 ttatcaaagc ggaaaacaac ggcaaaaaca tctgcatggt ttacgcccat aacgacgaca
     1681 tggtgattgg tgcaattcag gcaattaaag aagcgggcct gaaaccgggc aaagatattc
     1741 tgacaggttc tatcgatggc gtaccggata tctacaaagc gatgattgat ggcgaagcga
     1801 acgccagtgt tgaactgacg ccgaatatgg cgggacccgc ttttgacgcg ctggagaaat
     1861 acaaaaaaga cggcaccatg cctgaaaagc tgacgttaac caaatccacc ctttacctgc
     1921 ctgataccgc aaaagaagag ttagagaaga agaaaaatat ggggtattga gggttgctat
     1981 gcctgatgcc gattcgtagg ccggataagg cgctcgcgcc gcatccggcg atggtgcact
     2041 gaagcctgat gcgacgctta ccgcgtctta tcatgcctac tgggagcacg ctttacaccg
     2101 ggggaaacca tgacgaccga ccaacaccag gaaatcctcc gcaccgaagg attaagtaaa
     2161 tttttccccg gcgtcaaagc gttagacaac gttgatttca gcctgcgccg tggcgaaatc
     2221 atggcgctgc tcggtgaaaa cggggcggga aaatcaacgc taatcaaagc attaactggt
     2281 gtataccacg ccgatcgcgg caccatctgg ctggaaggcc aggttatctc accgaaaaat
     2341 accgcccacg cgcaacaact cggcattggc accgtctatc aggaagtcaa cctgctaccc
     2401 aatatgtcgg tcgctgataa tctatttata ggccgcgaac ccaaacgctt cggccttcta
     2461 cgccgcaaag agatggaaaa gcgcgccacc gaactgatgg catcttacgg tttctccctc
     2521 gacgtgcgcg aaccgctcaa ccgcttttca gtcgcgatgc agcaaatcgt cgccatttgc
     2581 cgggctatcg atctctccgc caaagtgctg atcctcgatg aacccaccgc cagcctcgac
     2641 acctaggaag tggagctatt atttggcctg atgcgtcagt tgcgcgatcg cggcgtcagc
     2701 ctgatctttg tcactcactt tctcgatcag agctatcagg tcagcgatcg gatcaccgtt
     2761 ttacgcaacg gcagtttcgt aggctgtcgg gaaacgcgcg agctaccgca gatcgaactg
     2821 gtaaaaatga tgctggggcg cgagctggat acccacgcgc tacagcgtgc cgggcgaaca
     2881 ttgttgagcg acaaacccgt tgccgcgttc aaaaattacg gcaaaaaagg aacgatagca
     2941 ccgtttgatc tcgaagtgcg ccccggcgag atcgtcggcc tggcaggctt gctgggatcc
     3001 ggacgtaccg aaaccgccga agtgatcttc ggtatcaaac ctgctgacag cggcacggcg
     3061 ttgatcaaag gcaaaccgca aaacctgcga tcgccacatc aggcttcggt actgggcatc
     3121 ggcttctgcc cggaagacag gaaaaccgat ggcatcatcg ctgccgcctc ggtgcgggaa
     3181 aatatcatcc tcgctctcca ggcccagcgc ggctggctac gacccatttc ccgcaaagag
     3241 cagcaagaga ttgccgaacg ctttatccgc cagcttggca ttcgcacacc ttcaactgaa
     3301 caaccgattg aatttctctc cggcggcaat cagcaaaaag tgttgctttc acgttggcta
     3361 ctgacccgac cgcaatttct gatcctcgat gagccaaccc gtggcattga tgttggtgcc
     3421 cacgccgaga tcatccgcct gattgaaacg ctatgcgccg atggtctggc gctgctggtg
     3481 atctcctccg aactggaaga actggtgggc tatgccgacc gggtgatcat catgcgcgat
     3541 cgcaaacagg tggcggagat ccggctggca gagctttccg ttccggctat catgaacgcc
     3601 attgcggcgt aaggagaaca gtgtgatgcc tcaatctctt ccggacacca ctacgccaaa
     3661 aaggcgcttt cgctggccga cggggatgcc gcagctggta gcactattgc tggtgctgct
     3721 ggtcgacagc ctggtagccc cgcatttctg gcaggtagtg cttcaggatg ggcgtttgtt
     3781 cggtagcccc atagacattc ttaaccgtgc agcccccgtt gcgttactgg cgattggtat
     3841 gacgctggtg atcgccaccg gtgggattga tctctccgta ggggcggtga tggctatcgc
     3901 cggagccaca acggctgcga tgacggtcgc ggaagtcagc ctgccgattg ttttgttaag
     3961 cgccctaggc accggcatcc tggcgggatt gtggaacggc atactggtag cgatcctcaa
     4021 aattcagcca tttgtcgcca ccctgatcct gatggtcgcc gggcgcggcg tggcgcaact
     4081 gatcacctcc ggacagatcg tcacgtttaa ctcgccggat ctctcatggt ttggcagtgg
     4141 atcgctgttg ttcctgccaa cgccagtcat tattgcggta ctgacgcttc tcctgttctg
     4201 gctgttgacc cgcaaaacgg cactggggat gtttatcgaa gccgttggta tcaacattcg
     4261 ggcggcaaaa aatgccgggg taaacacgcg gatcatcgtc atgctcactt atgtgttgag
     4321 cgggctgtgt gcggcgattg cgggcattat cgtggcggcg gatattcgcg gtgccgatgc
     4381 caacaacgcc ggattatggc tggagctgga cgccattctc gcggtggtga ttggcggcgg
     4441 atcgctgatg ggcgggcgct ttaacctgct gctctcggta gtgggggcgc tgattattca
     4501 ggggatgaac accggaattt tgctttcggg ctttccaccg gagatgaacc aggtggtgaa
     4561 agcggtggtg gtgctttgcg tgctgattgt ccagtcgcaa cgctttatca gtctgattaa
     4621 aggagtacgt agccgtgata aaacgtaatt tgccactgat gatcaccatc ggcgtctttg
     4681 tgctgggcta tttctactgc ctgacgcagt ttcccggttt tgcttccaca agagtgatct
     4741 gcaatatcct gaccgataac gcttttctgg ggattattgc cgttggtatg acctttgtga
     4801 tcctctctgg cggtatcgat ctctccgtcg gttcggtgat cgcctttact ggcgtgtttc
     4861 tggcaaaagt ggttggcgat ttcggcctct cgccgctgct ggcgtttccg ctagtgctgg
     4921 tgatgggctg tgccttcggc gcatttatgg ggcttctgat cgacgccctg aagatcccgg
     4981 catttatcat tacgcttgcg gggatgttct ttttgcgcgg cgtcagctat ctcgtttcgg
     5041 aagagtcgat tccgataaac catcccattt atgacacgct ctcaagcctt gcgtggaaaa
     5101 tccccggcgg cggtcgcctt agtgcgatgg ggctgttgat gctggcggtg gtggttatcg
     5161 gtattttcct tgcgcatcgt acccgttttg gcaatcaggt gtacgctatt ggcggcaacg
     5221 cgacgtcggc gaacctgatg gggatttcta ctcgcagcac tactattcgc atttatatgc
     5281 tctccaccgg actggcaaca ctggcgggga ttgtcttctc gatttatacc caggccggat
     5341 atgcactggc gggcgtaggt gtggaactgg acgccatcgc gtcggtggtg attggcggta
     5401 cgttgttaag tggtggcgtc gggacggtgc ttgggacgct ttttggcgtg gcaattcagg
     5461 gactgatcca gacttacatc aactttgacg gcacgctgag ttcctggtgg acgaaaatcg
     5521 ccatcggtat tttgttgttt atttttatag cattacagcg tgggttaacg gtgctgtggg
     5581 agaatcgtca gagttcgcca gtgacaagag tcaacattgc gcagcgataa aaatgcctct
     5641 ccgtgtggag aggcgcagga gattacgcgt ccgggaactc acggataaag cgttcgacat
     5701 cttcaaccat atggtcgttg ccgacaaaga acgaacggcg ctggtgcaga gtttccggga
     5761 tgatatccag aatacgctct ttgccatcgc tcgctttacc gcccgcttgt tccgccagga
     5821 atgccatcgg gttgcactca taaagcaaac gcagtttgcc gtccgggtgg ctggcggtgc
     5881 ttgggtagag ataaataccg cctttcagca ggttacggtg gaaatccgca accagtgaac
     5941 cgatataacg tgaggtatac gggcggttgg tggatttatc ttcttcctgg cagaatttaa
     6001 tgtacttctt caccccgttc ggaaacttaa tgtagtttcc ttcgttgatg gagtaggttt
     6061 tgcctttctc cgggaagcgc atccgttcct ggcacaggca gaaaacgccc agcgaaggat
     6121 cgtaagtaaa ggcgtgaaca ccgcatccgg tggtgtaaac cagcatggta gaggagccgt
     6181 ataccacgta acctgccgca acctgtttgt taccaggctg gaggaaatct tcttccgtta
     6241 ccggcgtgcc gacgggcgta actcggcggt agatggagaa aatggtaccg acagagacgt
     6301 taacatcgat gttggacgag ccatccagtg ggtccatcag caccacgtat tttgcatgtt
     6361 cacagccttc aaagacaaca atctcatctt cttcttcaga ggcaatgcct gcaacgatat
     6421 cgcgtgcttt cagtgcggct ttcagttttt cattagcgaa caagtcgagt ttttgctgaa
     6481 cctcgccctg cacgttctca gcaccgctgg cacccaggat atcaaccagt cctgctttgt
     6541 tgatatcgcg atggataatc ttggcgccca gttttattgc cgacagcaaa gcagtgagct
     6601 caccggtagc atgagaaaac tcgtgctgct tttcgacaat aaattcacct aacgttttca
     6661 taaaactttc cctgcaatgt ttatggagta aagcgaccgc aacaatctta acaaataatc
     6721 tcaatgttgc gctcaggtga atcgcgccag caaattacgg attatcctga aatgcgtttc
     6781 tcacttgccc gacatatgcg taaaatgagc ggcagattaa aaaaggatag tgacgtatgc
     6841 gcattcatat tttaggaatt tgtggcacgt ttatgggcgg tctggcgatg ctggcgcgcc
     6901 agttaggcca tgaagtaacg ggttcggacg ccaatgtgta tccgccgatg agcaccttac
     6961 ttgagaagca aggcattgaa ctgattcagg gttacgatgc cagccagctc gatccgcagc
     7021 cggatctggt gattattggc aacgccatga cccgtggaaa tccgtgtgtg gaagcggtac
     7081 tggaaaaaaa catcccttat atgtcaggtc cacagtggct gcacgatttt gtgctgcgcg
     7141 accgctgggt gctggccgtt gccggtacac acggcaaaac caccaccgcg ggaatggcga
     7201 cctggattct ggaacagtgt ggttacaaac cgggatttgt gatcggcggt gtgccgggga
     7261 actttgaggt ttcggcgcgt ctgggcgaaa gcgacttctt tgttatcgaa gcggatgagt
     7321 acgactgcgc cttcttcgac aaacgctcta aatttgtcca ttactgcccg cgtacgctga
     7381 tcctcaacaa ccttgagttc gatcacgccg atatctttga cgacctgaaa gcgatccaga
     7441 aacagttcca ccatctggtg cgtatcgttc cggggcaggg ccgtattatc tggccggaaa
     7501 atgacatcaa cctgaaacag accatggcga tgggctgctg gagcgagcag gagctggtgg
     7561 gtgagcaggg gcactggcag gcgaaaaagc tgaccactga tgcttccgaa tgggaagtct
     7621 tgctggatgg cgaaaaagtg ggcgaagtga aatggtcgct ggtaggcgaa cataatatgc
     7681 ataatggcct gatggcgatt gcggcggccc gccatgttgg cgtagcgccg gcagataccg
     7741 ctaacgcgct gggttcgttt attaatgctc gtcgccgtct ggagttgcgt ggtgaagcga
     7801 atggcgtcac ggtatatgac gattttgccc atcacccgac ggcgattctg gcaacgctgg
     7861 cggcgctgcg tggcaaagtt ggtggtacag cgcgcattat tgctgtgctg gaaccgcgct
     7921 cgaataccat gaaaatgggg atctgcaaag acgatttggc accttcatta ggtcgtgccg
     7981 atgaagtctt cctgctgcaa ccggcgcata ttccgtggca ggtggcagaa gtggcagaag
     8041 cctgcgttca gcctgcacac tggagtggcg atgtggatac gctggcagat atggtggtga
     8101 aaaccgctca gcctggcgac catattctgg tgatgagcaa cggcggtttt ggtgggatcc
     8161 atcagaaact gctggatggt ctggcgaaga aggcggaagc tgcgcagtaa ttcggcctca
     8221 gcctgagata gcattgccgg ataaggcgtt tacgccgcat ccggcaaacc atactcacat
     8281 caacaacgaa aattactctt cattctccgc cagttcgcgc agatactgga aaatctggcg
     8341 tgcggatttc ggcggcttat tcccttcttt ctctttcttc gcgttgcgga tcagagtacg
     8401 cagttgctga cgatcggcat cgggccacag atttaatacc tcagcgatgg cgtcatcacc
     8461 ttgatcgatc agacgatcgc gcaggttttc cagtttatgg aacagcacca cctgctggtt
     8521 gtgacggttt ttcagcttat ccagcgcctg acggatcggt tctacatcgc gctggcgcag
     8581 catcttaccg atgagctgca actggcggcg gcgaccttcc atcttaatac gctgggcgag
     8641 ctcaatagcc gcgcgcagat ccgcatctaa cgggatctta tccagcgcgt ttttccccag
     8701 atcaacaatt tccgcgccaa ggcgttttag ctcctcggca tcacgtttaa tttcactttt
     8761 actgacccag ataatttcat cgtcttcgtc ttcgatgtca tcaccgggaa cgtcgtcgag
     8821 ccagtcttcg ggctgcttag tcatctcagg ctccttaaaa aaagaggcta atgttaccag
     8881 ttaagatgcg cactgaaaaa cggttctctg ttagacttca gagaaactct ctacattatg
     8941 gcacttgcaa tgaaagtaat ctctcaagtt gaagcgcagc gcaagattct ggaagaagca
     9001 gtttccactg cgctggagtt ggcctcaggc aaatcggacg gtgcggaagt tgccgtcagc
     9061 aagaccaccg gcattagcgt aagcacgcgt tatggtgaag tggagaatgt tgaattcaat
     9121 agcgatggcg cgctggggat cactgtttat caccagaacc gcaaaggtag cgcatcatcc
     9181 accgatttaa gcccgcaggc cattgcccgt actgtacagg cggcgctgga tattgcccgt
     9241 tatacctcgc cagatccctg tgccggcgtg gcagacaaag agctgctggc ctttgacgca
     9301 ccagatctcg acttgttcca ccctgcggaa gtttccccgg atgaagccat tgaactggcg
     9361 gcccgcgcag aacaggcggc attgcaggcg gacaaacgca tcaccaatac cgaaggtggc
     9421 agctttaaca gccactacgg tgtcaaagtt tttggcaaca gccacggcat gttgcagggt
     9481 tactgctcaa cgcgtcattc gctctccagc tgtgtaattg ccgaagaaaa tggcgatatg
     9541 gagcgtgatt acgcctacac cattggtcgt gcgatgagcg atctgcaaac gccagagtgg
     9601 gttggggtcg actgtgctcg ccgtacttta tcgcgcctgt caccgcgtaa actctccacc
     9661 atgaaagcgc cggtcatttt tgccaatgaa gtggcaaccg ggctttttgg ccatctggtg
     9721 ggggcgatag cgggtggatc ggtttaccgt aaatctacct tcctgctgga ttcgctgggt
     9781 aaacaaattc tgccggactg gctgaccatt gaagagcatc cgcatctgct gaaagggctg
     9841 gcgtcgacgc cattcgacag cgaaggtgtg cgcaccgagc gtcgcgatat tattaaagat
     9901 ggcatcctga ctcagtggct gctgaccagc tattcggcgc gaaaactggg gctgaaaagc
     9961 accggacatg cgggcggtat tcacaactgg cggattgccg gacaaggtct aagcttcgag
    10021 cagatgctca aagagatggg caccgggctg gtggtgacgg aattgatggg ccagggcgtg
    10081 agtgcaatta ccggtgatta ttcccgtggt gcggcgggct tctgggtaga aaacggcgaa
    10141 attcagtatc cggttagcga aatcaccatc gcaggtaatt taaaagatat gtggcgcaat
    10201 attgtcaccg tcggtaacga tattgaaaca cgcagtaata tacagtgtgg ttctgtgctg
    10261 ttgccggaga tgaaaatcgc cggacagtaa aaaaactggc gcgacctgtc gcgctataaa
    10321 ctaaaaaatt acacaaaatc attcgcactg catcgagacg gaaagtgaat gagggccggg
    10381 gagcgtactc gcagtacgtg acccggtcga atgagcgtag tcgtcgatga ggcagtgtga
    10441 atgatgaagt gtaaataaaa aaggaagtga gcaatgcgaa aaagcctgtt agctattctt
    10501 gcagtctcct cgttggtatt cagttcggcg tcgtttgccg ctgatcttga agacaatatg
    10561 gaaaccctca acgacaattt aaaagtggtc gaaaaagccg ataacgcggc gcaagtcaaa
    10621 gacgcgttaa cgaagatgcg cgccgcagcg ctggatgcgc aaaaagcaac gccgccgaag
    10681 ctcgaaggca aatcaccgga cagcccggag atgaaagact tccgtcacgg tttcgatatt
    10741 ctggtcggtc agattgacga cgcgctgaag ctggcaaatg aaggtaaagt aaaagaagcg
    10801 caggctgccg cagagcaact gaaaacgacc cgcaacgcct atcaccagaa gtatcgttaa
    10861 ttcctcattt ccctgttgcc tgcactcagg taacagggaa cttatcatcg caaatgatgc
    10921 accacctgat tgctgctgcc gcgccagatc agggaagggt cttttaaatc ctgcacaaat
    10981 ttgccgtcga ccagcacgtt aatcaaatca acaacctgca tttgcgctgc gttgagttcg
    11041 tcgagtttat agcctgtcca cacccagatg tctttacccg gacactcggc gcggatgcgt
    11101 tgtaccagtt tcagaatatc cggcacgttt tgcggatgca gcggatcgcc gccggagagg
    11161 gaaataccct ggcgtttgat acgagtgtca ttcagatcgt taatgatctg gtcttccatt
    11221 gctttagtaa atggctgacc ggaatttacc cgccatgtgc ttttgttata gcaaccgggg
    11281 cattcatgaa cacacccgga gacaaacaga gtgcaacgag tgccggggcc gttgacgatg
    11341 tcgacaggat agtactgatg ataattcatt atttcgcctg gcttatcagt ccgcgtgtag
    11401 actgcatccg gtaatcaatg cctgatgcga cgctttcaca tcacatccgg catttgctta
    11461 gtgcagatca acctatctgc ccatttccca aatgtttaac gcggcgctta acttcttcct
    11521 gcttgccggc gttaaacgga cgtgcatccg ggctacctaa atatccgcac acgcggcgag
    11581 ttaccgacac acgggaggcg tcatggttac cacatttcgg gcaggtgaag cctttgctgg
    11641 tgcactcgaa ctcaccggta aagccacact cgtagcactc atcaatcggt gtattggtgc
    11701 cgtaatacgg tacatgctga tagctgtaat cccagacatc ttccagcgcc ttcaggttgt
    11761 gctgaatgtt tgaatactcg ccgtagcaaa tgaaaccacc gttcgccagc ggcgggtaag
    11821 gcgcttcaaa gtcgatcttg tcgtacgggt tcaccttctt ctccacatcg aggtggaaac
    11881 tgttggtgta gtaaccttta tcggtcacgc ccggcaccac gccaaactca gcagtatcga
    11941 gacggcagaa gcggtcgcac aggttttcac tcggcgtgct gtagagactg aaaccataac
    12001 ccgtttcttc cttccactga tccactgcct gacgcagacg ttcaacaatg gcgatacctt
    12061 tcgcgcgaag ctgctcgttg tcgtaaacat gctcgccgcc gaacagcgcg ttaatggttt
    12121 cgtggatgcc gatgtaaccc agcgaaatag acgcacgacc gtttttgaag atttcagaaa
    12181 catcatcgtc agcattgaga cgcacgccac aagcaccttc catatagagg atcggggcca
    12241 cgcgcgcttt cacgccttcg agacgagcga tacgggtcat cagcgcctta cgtgccagca
    12301 ccagacgttc atccagcagc ttccagaagg tggcttcatc gccttttgct tccagagcaa
    12361 tacgcggcag gttcaggctg atcacgccga ggttgttacg accatcgtgg atctgctcgc
    12421 cgttttcatt ttcccacacg ccgaggaagc tgcggcagcc catcggagtt ttaaacgaac
    12481 cggtgacttt cactacctga tcgtagttca ggatatccgg atacatgcgc ttgcttgcgc
    12541 actccagcgc cagctgtttg atgtcgtagt tcggatcgcc ttttttatgg ttcaggccat
    12601 cgcgaatcgc aaacaccagt ttcgggaaca ccgcagtttt acggttttta ccgaggcctg
    12661 cgatacggtt acgcaggata gattcctgaa tcaggcgcga ctcccagctg gtgcccagac
    12721 caaaaccaaa ggttacaaac ggcgtctgac cgttggcggt gtgcagggtg tttacttcgt
    12781 actccagcga ctggaaggca tcgtagcact ctttaatggt acgagagtta gcgtagcctt
    12841 cggcgtccgg gatgttccac tcttctgcgg tcttgcgatg tttgttgtag ctggcggtga
    12901 caaacggtgc cagcacttca tcgatacggt taatggtggt gccgccataa atatggctgg
    12961 cgacctgagc aataatctgc gcagttacag cggttgccgt agagatcgac ttcggcggtt
    13021 caatctcggc gttccccatc ttaaagccct gggtcagcat gcctttcagg tcgatcaaca
    13081 tgcagttgaa catcgggaag aacggcgagt aatcgagatc gtgatagtga atatcgccac
    13141 gctcatgtgc ctgcaccacg tcacgcggca gcaggtgctg acgtgcatag tgtttagcca
    13201 cgatcccggc cagcaggtcg cgctgggttg gaatcacctt gctgtctttg ttggcgtttt
    13261 cgttgagtaa cgaggcgttg gtctgctcga ccagaccacg gatctcctga ttcaggcgac
    13321 cgcgtttttc acgttcaatg tcgcgatcgt gacggtactc gatgtaagca cgagccagtt
    13381 gtttgtatgg acctgacatc agctggtttt caacagcggt ctggatctca ttgatatcca
    13441 cctggttgcg gccctgcatc tgctcgctga caactgcagc aacagtggcg caataatcgg
    13501 catcatcgac ttccgctgct ttagctgcac gcagaatcgc ttctttgatg cgctctgatt
    13561 taaacggcac tttgcagccg tctcgtttca tcacatgcgg tgtcatgatc gctccatatt
    13621 tttaagaaca ggttatccac agaaattggg aaaggcgttt tccggttttt tcgtttcgtt
    13681 ttccggtgct ttccgcaatc gccatccgct tttccacaac gccgcacctt tttcgtgggg
    13741 agctgtagta gcaattatag tcgattaata caacatattg ggttgggacg cattttaaag
    13801 tctatatata gtgctttgca tcaaggatgt ttgaactttt tttgatgtag ctcaaagtaa
    13861 aaagcagagc gtacggatga cgggcgctac agcgttatgt aaatttttta atgaatttgc
    13921 tggttgaaaa ataaacaaaa acaacatgct gacagacaaa accccggaat gaccggcatt
    13981 accggggctt agggaagatt tacttctgta accaccagac agcctcaaaa ggccgtaaat
    14041 tcatggcaca gggttgtggt gaggcttctt cgtagttatg catcacaagc tgccagttgc
    14101 cgcgcatttg ccctggctgc cagggttgga tctcacggct aaggttggca atgaccagca
    14161 aggtttgccc cttccattca cggcgatagc accacaatac agggctgttt ggcagcagat
    14221 cctggtaatt gccccatgtc aggatggctt cctgcttacg cagtgcgatt aacttttggt
    14281 aggtgtaaaa caccgaggaa tcatcggcca gcgcggcttc tacgttgatt tgttgatagt
    14341 tatcacccag gccaatccac ggttcgccag ccgtaaatcc ggcattatcg ccgttgctcc
    14401 attgcatggg cgtgcggctg ttgtcacggg atttactggc gaggattgcc aataactcgt
    14461 cggcatcacg accatcgttg cgcagctcgg caaacatatt gaggctctct acgtcgcgat
    14521 agtcagtaat gcgcgtgaaa tgcgggttgg tcatgccaat ctcttcgccc tggtagatat
    14581 acggcgttcc ctgcatgcca tgcagcacca tcgccagcat ttttgccgca ggcacgcggt
    14641 attcaccttc atcaccaaag cgagaaacaa tgcgcggctg atcgtggtta caccagaaca
    14701 aggcattcca tgctacgttg tgcattcctt gttgccagtg gcggaacaat gttttcaacg
    14761 ccacaaagtc aggtttagcc agcgtccatt tttcaccacc gggataatcg accttcaggt
    14821 gatgaaaatt aaaggtcatc gacaattcac tgcctgtcag tgccgcgtat cgctggcaat
    14881 gctcaaggct ggtggaggac atttcaccta cggtcattaa cccgcgtggc gtaaacacat
    14941 cgcggttcat ctcgtgcaaa aactcgtgtg ctcgtggccc gtcggtgtag aagcgacgcc
    15001 cgtcgccatc caggtcatca gggaaacgcg ggtctttgga gatcagattc accacatcca
    15061 ggcgcaaccc gtcgacccca cgatcggccc agaactcaca gacttttttc agcactgcgc
    15121 gtaccgctgg attctcccag ttgagatccg cctgttctgg tgcaaagaga tgcaaatagt
    15181 actgttcgct ttccgcatgc cagcgccacg cactaccgcc aaattttgaa cgccagttgt
    15241 tcggtggcgt ttctggttct ccatcgcgcc agatataaaa ctggcggtaa gggctttctt
    15301 tgttcagcgc ctcgcgaaac caggcatgtt gggtagaggt atggttaaac accatatcga
    15361 gaatgatacg aatcccgcgc gattttgcct gcgtcaccag ttcgtcaaaa tcgtccagcg
    15421 tgccgtaggt gggatcaatc gccgtatagt tcgctacgtc gtaaccgtta tcgacctggg
    15481 gagagacata aaagggggtt agccagatgg catcaacgcc cagtttatgc agatagtcca
    15541 ggcgttggat aacgccacgt aaatcgccgg taccgctacc cgtggtgtcc tgaaaactct
    15601 ttggataaat ctggtagata acgccgtttt gccaccagtg gggaggatta gtcattacgt
    15661 tattcctgca aatgcgaggg ggcgcaattg cgccccgaag aaaattaaac aatgtccagc
    15721 gtgcccaggc ggtatttccg ctgatagata aacgaggtga gtacaatcgg gatgatgatg
    15781 gcgatagcca ttgccagcgc aaacacctgc cagtagttcg gttgaatcga gagaattccc
    15841 ggcaggccgc ctacgccgat gccattcgcc ataacgccgt tcaggccgca tagcaatcct
    15901 gccagaccag aaccaatcat cgcgcacagc atcgggaagc gatatttcag gttgatgccg
    15961 tacattgcag gctcagtgac cccaagccag gcggagatcg ccgcaggcac ggagatctcg
    16021 cgttcattgt gcttgcggct ggaaatgata atgccgatca cggcggagcc ctgagcgata
    16081 ttcgacagcg caatcagtgg ccacactggc gtaccaccca tgctttgaat catctgcaaa
    16141 tcaatagcaa gcgtggtctg gtgtaccccg gtgatcacca gcggggcgta caggaagcca
    16201 aacaatgccg cgccaatcgg agcaaagctg ccggtcatca ggtgacgtac cgcaaaggca
    16261 acgccatcgc caatcatgcg accaaacgga ccaatcagcg catgggcgag gaacaccgcg
    16321 aggatcagcg aacagacggg caccaccacc agatagaggt aatctggcac gatgcgttta
    16381 aggcgagttt caataacgcc cagcgccagc ccggctaaca gtgccgggat cacctgcgcc
    16441 tgatagccca ctttggcgat gctgaacatg ccaaagtccc acacttccgg cagctgctgc
    16501 ccgagcagat aagcgttcat cagttggggg gaaaccagtg tcacgccaag cacgatacca
    16561 aggatcggtg tgccgcccat ttttttcacc gctgaccagc aaatcccgac cggcaggtag
    16621 aagaagatcg cttcaccgat caaccacaga aaatcgtaga tcgtttgcag ggaagggtac
    16681 atttgcgcca gcgtttgacc gttgctcatg ggcaaatcgc cgatcacatt gcgaaaaccg
    16741 aggatcaaac cgccgctaat caacgcgggc agcaacggga agaaggtctc tgcgaaatga
    16801 gagatcaact gctcatgcca tttcatattc tgccgggcgg ctttttttac ctgctcttta
    16861 tcaacctgcg cctgtccggt tgacgctatc agtgcttgat agtagtcacc cacgttggtg
    16921 ccaatcacca cctgaaattg cctggcattg gtgaaacagc ctttcaccat ggggagttgc
    16981 tcaatttctt tcggtctggc attggccggt tggttgagga caaagcgtag gcgagtaata
    17041 cagtggctca ccgtcgcaat attgccgcgc ccgccgacca gttcaatcaa ccgatcgata
    17101 tccgtttggt ttattttgct catcataaag ccccatggca gatgacattt ttggttggct
    17161 gcagaatata ttgcgcggaa aaatttaaaa acgggaacgt tcccgaaacg cagcgaagat
    17221 cacaatttat cgttcaggaa acgatctgga cagggtggcg gggatgatga tttgttgcgg
    17281 ttcgctgcgc ccggttacct gtgcgatcaa ctggcaggcc gcctggcgtc cagcttcggc
    17341 gtaaccggga tctacggtga cgatctccgg atggaggaat ttcattaacg gcgtattacc
    17401 gacgctcgcc agttgcaagg tgtcgatgcg ttgctcttgc aggtatttac ttgcgccaag
    17461 tgccagcgtg tcggttgcgc acagtaaggc ggtagtttca ggcgtaatca cttttgctac
    17521 gttctcatag ccttgcttca tagcaaggcc tggcagagcg gcaacgggat gcagtttatg
    17581 cgctttgcag aacgccaggt aggcttcgtg acgtcgctta ccggtcgtca cgtcactgtg
    17641 cggcacgccg agataactga tattacgatg cccctggtca tacagccgtt gcatcaggat
    17701 cttgattgcc ccttcgtcgt cataacagac cgaagcaaag ccttttgcgt cacgcgccag
    17761 cagaaccagc gatgactgcc agtgggctaa catttcttct gttatgccgg taaaaccgaa
    17821 cagcactacg ccgtcgatat tacgccgttt cagcaccccc aaatgttcgg caactaattg
    17881 cggggaaaac tgactttcca tcatgattgg gtcgtaacct tgttcataga actctggcag
    17941 catggtttga acggcgagat tttctgacaa cgaatccagg cgggtaacaa tgatggcgac
    18001 cactttatcg ctttgcccac gcatagcgcg cgcagagcgg gaaggggaaa atccatgctg
    18061 attcatcact gcttcaacac gctcgcgggt gcgctggctc acgccgcttt cgttattcag
    18121 cacccgggaa actgtagatt tccccacgcc gcttaagcgc gcgatgtctt tgatggtcag
    18181 ccgattttgc atcctgttgt cctgtaacgt gttgtttaat tatttgagcc taactttacc
    18241 cgtgcattca gcaatgggta aagtctggtt tatcgttggt ttagttgcca gcaggtatta
    18301 tatcgccata gatgctacga atattattgg attctcctta ttatttgcgg cgcttttttc
    18361 acttaccgga ggttatatgg aacctgatcc cacgcctctc cctcgacgga gattaaaact
    18421 tttccggtaa gcccgtcttt tcacggcgtt accggatgcg taaggccgtg acgttttaac
    18481 gtccctgctc agctttatta ccttcaggta aggcttcgcc acgcctgaag acatttctgt
    18541 actgtttcag acagtgcgga gggactcctt atgtttaaag aaatttttac ccggctcatt
    18601 cgccatttac cttcccgtct ggttcatcgt gatccattgc ctggcgcgca gcagacagtg
    18661 aatacggtgg tcccgccgtc cttaagtgcg cattgcctga aaatggcggt gatgcccgaa
    18721 gaagaattgt ggaaaacgtt cgacacccat ccggaagggt taaatcaggc ggaagtggaa
    18781 tctgcccgcg aacaacatgg tgaaaataaa ttacccgcac aacaactgtc gccgtggtgg
    18841 gtacatttat gggtctgcta tcgcaacccc tttaatattt tactcaccat tctcggcgct
    18901 atttcttacg ccacggaaga tttatttgct gcgggcgtta tcgcgctaat ggtcgctatt
    18961 tctacgttgc tgaactttat tcaggaagca cgttccacta aagcggcaga tgccctgaaa
    19021 gcgatggtca gcaataccgc gacggtgctg cgcgtaatta acgacaaagg cgaaaatggc
    19081 tggctggaga tcccgatcga ccagctggtg cccggcgata ttataaaact ggcggcgggg
    19141 gatatgatcc cggcagattt acgtatcttg caagcgcggg atctgttcgt cgctcaggcg
    19201 tcgttaaccg gtgagtctct gcccgtggaa aaagccgcta ccactcgcca gccggagcac
    19261 agcaatccgc tggagtgcga cacgctgtgt tttatgggca ccaccgtggt gagcggcacg
    19321 gcacaagcaa tggtgattgc tacaggtgcc aatacctggt ttggtcaact ggcggggcgt
    19381 gttagtgagc aggaaagcga gccgaatgcc tttcagcaag ggatcagccg cgtcagtatg
    19441 ctgctgattc gctttatgct ggtgatggca ccggtggtgc tgttaatcaa tggctacacc
    19501 aaaggcgact ggtgggaagc ggcgctgttt gcgctttcgg tcgcggtagg cctaacgccg
    19561 gaaatgttgc cgatgattgt tacctcgacg ctggcgcgcg gcgcagtaaa gctgtcgaaa
    19621 cagaaagtga tcgtcaaaca tctggatgct attcagaact ttggcgcaat ggatattctg
    19681 tgcactgata aaaccggcac cctgacgcag gataaaattg tgctggagaa tcataccgat
    19741 atctccggta aaaccagcga acgcgtgctg catagcgcgt ggttgaacag tcattatcag
    19801 accggactta aaaacctgct cgatacagcg gtgctcgaag gtacggatga agagtcagcg
    19861 cgctcgctgg ccagtcgttg gcaaaaaatc gatgagattc cgtttgattt cgagcgtcgc
    19921 cggatgtcgg tggtagtggc agaaaatacc gagcaccatc agctggtttg caaaggtgca
    19981 ttgcaggaaa tcctcaatgt gtgttcgcag gtgcgtcaca atggcgagat tgtgccgctc
    20041 gatgacatca tgctgcgtaa gattaagcgg gttactgata cgctgaatcg tcaggggctg
    20101 cgcgtggttg cggtggcgac gaaatacctg ccagcgcgtg aaggagatta ccagcgggcg
    20161 gatgaatccg acctgatcct cgaaggatat attgcttttc ttgatccgcc aaaagagaca
    20221 accgctccgg cactgaaggc attaaaagcg agtggaatta ccgtaaaaat ccttactggc
    20281 gacagtgagt tagttgcagc gaaagtgtgc catgaagtgg ggctggacgc gggagaggtg
    20341 gtcattggta gtgatattga aacgctatct gacgacgaac tggcaaatct tgcacagcgc
    20401 accacgctgt ttgcccgcct gacgccgatg cataaagaac gcattgtgac cttactgaag
    20461 cgcgaagggc atgtggttgg ctttatgggc gatggtatta atgatgcgcc cgccttacgc
    20521 gcggcggata tcggcatttc tgtggacggc gcggtagata ttgcccgtga agcggctgat
    20581 atcatcctgc tggaaaaaag cctgatggtg ctggaagagg gggttattga gggacgtcgc
    20641 actttcgcca acatgctgaa atacatcaaa atgacggcga gttctaactt tggtaatgtg
    20701 ttcagcgtgc tggtggcgag tgctttcttg cccttcctgc cgatgttgcc gttacacttg
    20761 cttattcaga acctgctgta cgatgtgtca caggtggcga tcccgtttga taacgtcgac
    20821 gacgagcaaa ttcaaaagcc gcagcgttgg aatccggcgg atctggggcg ctttatgatc
    20881 ttcttcggac cgatcagctc gatcttcgat attctgacgt tttgcctgat gtggtgggta
    20941 ttccatgcca acacgccgga aacgcaaacg ctgttccagt cgggatggtt tgtggtgggc
    21001 ttactgtcgc aaacgctgat tgtgcatatg atccgcaccc gccgtgtgcc gtttattcag
    21061 agctgtgcat cgtggccgtt aatgatcatg accgtgatcg tgatgattgt cgggatcgca
    21121 ttgccgtttt caccgctggc cagttatctg caattacagg cgttgccgtt aagctatttc
    21181 ccgtggctgg ttgcgattct ggcagggtat atgacgttaa cccagttggt gaaaggattt
    21241 tatagccgtc gttacggctg gcagtaaaga ataaactggg catggtggcc cggattcaga
    21301 ttgcagacaa agtgagtttt gttcatgccg gatgcggcgt aaacgcctaa tccggcctac
    21361 aaattcaatc aattgcagga atcacgtagg cctgataagc gtagcgcatc aggcgatttt
    21421 gcgtttgtca tcagacttaa tccgggcatg atagcccgga tttccatcaa gattagcgac
    21481 gaatagcgat cgcttcgatc tcaatcttta cgtctttcgg cagacgggca acttcaacgc
    21541 aagaacgtgc cgggaaggtg gcgttgtgtt cggtgaagaa ggtttcgtaa gtggcgttta
    21601 cggttgcgaa gtcgttcaga tcttttacaa acacggtagt tttaacgatg tcgcccactt
    21661 tcagaccagc ggcttcgacg atcgctttta cgttatccag cgactgacgt gcctgtgcag
    21721 cgacgtctgc cggtacttcg cccgttttcg gatttaccgg gatctgaccg gaggtgatga
    21781 tcatatttcc cagatcaacg ccctgtacgt aaggaccgat agctgctggt gcattttccg
    21841 tcgcgatagt tttgctcatg atttctcctt tattacagcg gtaaaaagtc tggctcatta
    21901 tagggagcca gacttttatt accaaccgca attaattggc cagcaccaca ttatgggaaa
    21961 actctttttc acagtatttg catttgagcg cgatgtcatt ggcgcgtttt cgcacggcaa
    22021 agctggatga aaccggttcg gcatggctga tacagttgct gttcgggcag accaacacat
    22081 tgtcgatgcg ctctggcaga ctggggcgcg atttacccac cacttcatag ttgtcgatac
    22141 ggttaaccgt ggcttgcggc gcatacaatg ccagttgatc tacctgatct tcactcaaaa
    22201 aggtattttc gattttgatc agatctttgc ggcccatctc gccagaaggc aggttcagac
    22261 caatggtgat gcgctgatcc gtttcggtca gcttgaacag actcaacagc ttaaaaccga
    22321 tctgggcggg gatatggtca attaccgtgc cgcgtttaat agcttcaacc tgcaatttat
    22381 tatcgtgtgt catctctatt tccccttaca gtaccagatc gcgattcaga actagtgcca
    22441 gtaacgcctg gcgagcgaaa atcccgttgc ctgcctgctg gaagtaccag gcgtgtggcg
    22501 ttttatcaac atccgtcgca atttcatcaa cacgcggcag cggatgcagt actttcatat
    22561 tggctttggc gttgtggaga tcgctggcgc gaagaacaaa ctgcgctttc acgttggcgt
    22621 attcggatgg gtccaggcgc tctttttgca cgcgggtcat atacaggatg tctacttccg
    22681 ccatcacttc ttcaatagag ctgtgcagac tccatgcgat ccctttttca tcgagcatat
    22741 ccagaatgta ttgcggcatt gccagcgcgt ccggcgcgat gaagtaaaaa cggttgccgt
    22801 cgaacttcgc taacgcctga gtcagggagt gaacggtgcg gccatatttc aggtcaccaa
    22861 ccattgcgac gtggagattg tccagacgcc cctgggtttc ctgaatagtg aataagtcca
    22921 gcaaggtttg cgtcggatgt tggttggagc catcaccggc attcagtacc ggtacattgc
    22981 cggaaaactc ggtggccagg cgcgccgcac cttcctgcgg atgacgcatc actatcgcat
    23041 cgacgtaagt gctgataacc gaaatggtat cggccagcgt ttcgcccttt ttacccagtg
    23101 atgtattggc gctgtcggag aagcccacca cgctggcacc caggcggtgc atggaagttt
    23161 cgaaagagag gcgggtacgg gtagaggctt cgaagaagca gctggcaatg actttgtgct
    23221 tcaacagctc tggttgcggg tttgctttca gttttgccgc tgttgccagc accagattaa
    23281 ggtcatcgcg actaaggtcg tttatggaaa tgatatgttt ctgatatagc ggattagcca
    23341 tcttttatct cctgacgcct gggcaaaaaa aagcccctcg attgaggggc tgggaatggg
    23401 tgatcaacgg gaagaaaaac ggcaggccag cgtctttttt cagacgcggt aagacaaaat
    23461 gtcgaacaca ctgaaccata catcctcccg gcaaattgtc cggcattata ctcatcgtca
    23521 gaagcggtgc aagcaattga tgcaatattt tgtcagcgca aacggtttat ttgaatttaa
    23581 agttaaaata tatgcatttt tatttactgt gattctgggg ggaactgtcg ttcggtatca
    23641 ataattgcag acatttcctg cttttttctt tttcactttc acgcaatcag atatgcattt
    23701 tattccattc atccgactta tagggcggag tgtgaaaacg aacggctagc actattgctt
    23761 agagctcagg gatgcgcgct atcactttaa tttcaaaatc aaagcctgcc agccatgtaa
    23821 cgcccaccgc cgtccaggtt ggataagatg gcgcgctaaa tatttcattt ttcaccgtca
    23881 tgatgtcttc aaattgtttt tctggatcgg tatgaaagct cgtaacatca atgatatcgt
    23941 caaaagtgca tcccgcagct gccagggtcg catgcaaatt atcaaaggcc agtctgactt
    24001 gttgctgaaa atcgggttct ggtgttccgt cctctcgact tcctacttgc ccggaaacaa
    24061 acagcaaatc gccggaacga atagccgcag aataacgatg ctcagcatac agtgaatgtc
    24121 gtccagcagg gaaaacagcg gttctttcta ccatttggtt atcctcaaga tttacgacat
    24181 gaacagaaga tttatattta ccaggagccg cttttagcgg acgacgtgag taaacaaaac
    24241 ccagacatca tgggaaatgg ctgggcttaa ttgagcgtag tcggttatgc gccaaacgcg
    24301 ccatcaatgg tatgcatcgc gccggtaaca aaactggctt ctggccctgc taaccatgcg
    24361 accataccag cgacctcttc cggttgccca tgtcttttga tggccataaa actatgcgac
    24421 atatcgcgca ttggcccgtt ggcgggatta gcgtcggtat caattggccc tggctggacg
    24481 acgttgatgg tgatcccacg cggtccgaaa tcacgggcca gcccgcgcgc catgccttgc
    24541 agggcagatt tactggcggc ataagcagcc atgcctgcaa caggcatacg atcgccattc
    24601 acggagccga tgattaagat gcgtccgcct tcgggcatct gccgggcggc ttcaacagag
    24661 gcatggtaag gagcatgaat attgattttg aaaaggcgat caatatcgtc ggcatttaat
    24721 tccagggcat cgccaaagac gccaatacct gcatttacca ccaggatatc caatgcgccg
    24781 ctcttacgaa cgacatcaat aacagcgtct ttgtcagcac tatctgtgaa tactgctgtc
    24841 gctccagtct cttgtgccag gcgttcagcg gcatctttcg accccgcata ggtgaatcgt
    24901 acattggccc catcggtgac gaaacgacgt acgatagcgg caccgattcc acggctacca
    24961 ccgaggatga gaactgtctt acctgtaaaa gcgcccataa ggactccttg atttattatg
    25021 taacatgcat tacaaaactg ttttaacttt ctgtcaacaa gttttgtaat ggtcactaaa
    25081 aaacaatctc gcgttccagg tcgtcccaga cgtttcgctc ctgagcaggc agtctctgcg
    25141 gcaaaagtgc tttttcacca aaaaggtttc gatgctgtca gtgttgctga agttactgat
    25201 tatcttggta ttaacccccc gagcctctac gcggcttttg gcaataaggc tgggttattt
    25261 agccgtgtac tcaatgaata tgtcggtacg gaagctattc cgcttgccga tattcttcgt
    25321 gatgatcgtc cggtagggga gtgcctggct gaggtattaa aagaagcggc gcgccgatat
    25381 agccaaaacg gcggctgcgc tggctgtatg gttcttgaag gcattcatag tcatgatcca
    25441 caagcgcgtg atattgccgt tcaatattat cacgccgcag aaacgaccat ttatgactat
    25501 atcgccaggc ggcatccaca aagcgcacaa tgtgtgactg attttatgag taccgtgatg
    25561 tcagggcttt ctgcgaaggc acgggagggg cactccatcg aacaactctg tgcaacagct
    25621 gcactggcgg gggaagcgat aaaaactatt ctcaaggagt gatgcgggcc ttgacccgaa
    25681 aggcgggaac gcgcctgccg ataagttgtg ataagacaat aattcacgcg ttaaggctag
    25741 cggaattgat catcttttcg tataacgatg gaaatgaaac gttgttttaa ttaaggagtg
    25801 gaaaagatga tcatcggaaa tattcataat cttcagccgt ggctacccca ggagttacgc
    25861 caggcgattg agcatatcaa agcacacgtt acggcagaaa cgccaaaggg caagcacgat
    25921 atcgaaggca atcgtctgtt ttatcttatc tcggaagata tgaccgagcc gcacgaagct
    25981 cgccgtgcgg agtaccatgc ccgctatctc gacattcaga ttgtgttaaa aggtcaggaa
    26041 ggcatgacct tcagcacgca acctgcaggc accccggata ccgactggtt agctgataaa
    26101 gacatcgcat ttttgccgga aggcgttgat gagaaaacag ttatccttaa tgaaggtgat
    26161 tttgttgtgt tttatccggg ggaagtgcat aaaccgctgt gcgcagtggg cgcgccagcc
    26221 cgggttcgca aagcagtagt gaagatgctg atggcgtgat gacttttcgc cgtaaataac
    26281 tccaggttta cggcgagttt gtgaaaagag cgttttttga tatttttttg tgagtaaaat
    26341 ttgtaatgct tagacgttct tattaactca aggagttcgt catgagcaaa atatcagatt
    26401 tgaattattc tcaacacatt acattagccg acaattttaa acaaaaaagt gaagttttaa
    26461 atacctggcg tgttggaatg aataattttg cccgtaatgc cgaggggcag gataacacaa
    26521 gaaatatcct tgatcctaag acatttttgg aatttttggt aaaaatattt actctaggtt
    26581 atgtggattt tagcaaacgc tccaacgaag cgggaagaaa tatgatggct catattgagt
    26641 cctcatctta tatcaaaaat aatgatggca gtgagataat aaagtttgtt atgaataatc
    26701 ctgaagggga acgagcggat ttatctaagg tggaaataga aatcacactt tccactttca
    26761 ctactatggg gactcgtcaa ggacatacgg ctattatatt tcaacaacct gatggttcga
    26821 ctaatcgtta tgaaggaaag tcctttgaaa gaaaagatga gagttcatta cacctgatta
    26881 ctaacaagat tctggcatgt taccaacgcg aagctaacaa ggaaatagct cgtctattaa
    26941 atatttcaca ggagttaaat aattctcagg acttgaataa ctcgcaggtg agttgtaaag
    27001 attcagttga ttctacgatt acggatttat tagaaaaacc attgaataat gcattattag
    27061 caataaggaa agaacatctg ctattaatgc cttatgtatg taatgaatcg atttcatact
    27121 tgcttggtga aaaagggata ctgaaagaaa tagatgacct taacgcagta aataattatc
    27181 ttcttaataa taagaaagct actgacaatg aaattaatga catcaaagtt aacctgtctc
    27241 atattcttat tgattcctta gatgatgcaa aagttaacct tacaccggtc atcgattctg
    27301 gagacttttt taaaatcccc atatattaat gatgtaagaa tactggattg gtgttttaat
    27361 aaaagaatgc aatattttgg tgattctgaa aagataaagt atgcatgctc cgtgataaat
    27421 catattgatt ttagccgcga tcaatctaaa gattttagct gcgatcaatc taaaattaaa
    27481 atagctgaga ccttattttt caatctcgat aaagaaccct ataaaaa
//
LOCUS       DADKRT010000036        27437 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.036, whole genome shotgun sequence.
ACCESSION   DADKRT010000036 DADKRT010000000
VERSION     DADKRT010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27437
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.036"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            435..3620
                     /gene="rne"
                     /locus_tag="JQ356_001306"
     CDS             435..3620
                     /gene="rne"
                     /locus_tag="JQ356_001306"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HAY4621454.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPA
                     QPGLLSRFFGALKALFSGSEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD
                     TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTTDEQQAPRRERSRR
                     RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV
                     VAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS
                     RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV
                     EEQREQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPVPVAEPQPEVVETTH
                     PEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEVAETAEVVVAEPE
                     VVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPHHSDWQR
                     PTFAFEGKGAAGGHTATHHASAAPARPQPVE"
     gene            complement(3817..4770)
                     /gene="flgL"
                     /locus_tag="JQ356_001307"
     CDS             complement(3817..4770)
                     /gene="flgL"
                     /locus_tag="JQ356_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-filament junction protein FlgL"
                     /protein_id="HAY4621455.1"
                     /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI
                     AASQAVVLSQAQAQNSQYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL
                     SDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI
                     KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS
                     EADKEIAAAALDKTNRGLKNSLNNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMS
                     DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK"
     gene            complement(4782..6425)
                     /gene="flgK"
                     /locus_tag="JQ356_001308"
     CDS             complement(4782..6425)
                     /gene="flgK"
                     /locus_tag="JQ356_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HAY4621456.1"
                     /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA
                     NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS
                     TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI
                     AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS
                     VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN
                     TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPA
                     VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV
                     AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEKDAGDSDNRNGQ
                     ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTETLKTSSATQGNVVTQLSNQQQSIS
                     GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR"
     gene            complement(6491..7432)
                     /gene="flgJ"
                     /locus_tag="JQ356_001309"
                     /pseudo
     CDS             complement(6491..7432)
                     /gene="flgJ"
                     /locus_tag="JQ356_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415599.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
     gene            complement(7432..8529)
                     /locus_tag="JQ356_001310"
     CDS             complement(7432..8529)
                     /locus_tag="JQ356_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415598.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HAY4621457.1"
                     /translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG
                     LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT
                     IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVSGAGASAGGSSVQVNQL
                     NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA
                     RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA
                     QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSARLNNVVRA
                     LNALGATPMDLMSILQSMQSAGCLRAKLEII"
     gene            complement(8541..9239)
                     /gene="flgH"
                     /locus_tag="JQ356_001311"
     CDS             complement(8541..9239)
                     /gene="flgH"
                     /locus_tag="JQ356_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HAY4621458.1"
                     /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
                     NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVVDARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            complement(9292..10074)
                     /gene="flgG"
                     /locus_tag="JQ356_001312"
     CDS             complement(9292..10074)
                     /gene="flgG"
                     /locus_tag="JQ356_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HAY4621459.1"
                     /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
                     LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF
                     FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT
                     QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY
                     VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMQQKLTQL"
     gene            complement(10212..10967)
                     /locus_tag="JQ356_001313"
     CDS             complement(10212..10967)
                     /locus_tag="JQ356_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgF"
                     /protein_id="HAY4621460.1"
                     /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV
                     PVEGLSLPTRTLVTASTPGADMTPGKIDYTSRPLDVALQQDGWLAVQTADGSEGYTRN
                     GSIQVDPTGQLTIQGHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
                     LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADLTLRVMSGVLEGSNVNAVAAMS
                     DMIASARRFEMQMKVISSVDDNAGRANQLLSMS"
     gene            complement(10987..12915)
                     /gene="flgD"
                     /locus_tag="JQ356_001314"
                     /pseudo
     CDS             complement(10987..12915)
                     /gene="flgD"
                     /locus_tag="JQ356_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706995.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
     gene            complement(12927..13331)
                     /gene="flgC"
                     /locus_tag="JQ356_001315"
     CDS             complement(12927..13331)
                     /gene="flgC"
                     /locus_tag="JQ356_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HAY4621461.1"
                     /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA
                     KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM
                     VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ"
     gene            complement(13335..13664)
                     /gene="flgB"
                     /locus_tag="JQ356_001316"
     CDS             complement(13335..13664)
                     /gene="flgB"
                     /locus_tag="JQ356_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HAY4621462.1"
                     /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDID
                     FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYQMSLSALSGQIKGMM
                     NVLQSGN"
     gene            13820..14479
                     /gene="flgA"
                     /locus_tag="JQ356_001317"
     CDS             13820..14479
                     /gene="flgA"
                     /locus_tag="JQ356_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HAY4621463.1"
                     /translation="MLAIKRSVAIIAILFSPLSAASNLTSQLHTFFSAQLVGVSDEVR
                     VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
                     PIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTHFRQAW
                     RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARMRMVSGLVVSGVVDADGNILIN
                     L"
     gene            14555..14872
                     /gene="flgM"
                     /locus_tag="JQ356_001318"
     CDS             14555..14872
                     /gene="flgM"
                     /locus_tag="JQ356_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HAY4621464.1"
                     /translation="MSIDRTSPLNPVSTVQPRETTDAPVTNTRAAKTTDSTSTSTSTS
                     TSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDIGKIADALINEAQQDL
                     QSN"
     gene            14877..15293
                     /gene="flgN"
                     /locus_tag="JQ356_001319"
     CDS             14877..15293
                     /gene="flgN"
                     /locus_tag="JQ356_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HAY4621465.1"
                     /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
                     QKSSLLATLDYLEQLRKKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE
                     RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI"
     gene            complement(15333..16868)
                     /gene="murJ"
                     /locus_tag="JQ356_001320"
     CDS             complement(15333..16868)
                     /gene="murJ"
                     /locus_tag="JQ356_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HAY4621466.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
                     INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
                     SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
                     AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
                     RTV"
     gene            complement(17035..17901)
                     /locus_tag="JQ356_001321"
     CDS             complement(17035..17901)
                     /locus_tag="JQ356_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY4621467.1"
                     /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWMLQGAWSPTRAKALP
                     ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD
                     AERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT
                     LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG
                     SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIEC
                     VQNQTVPQTAGE"
     gene            complement(17903..18550)
                     /locus_tag="JQ356_001322"
     CDS             complement(17903..18550)
                     /locus_tag="JQ356_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF480 domain-containing protein"
                     /protein_id="HAY4621468.1"
                     /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     ITTLLLRGAQTPGELRSRAARMYEFSDMAELESTLEQLANREDGPFVVRLAREPGKRE
                     SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD"
     gene            complement(18561..19145)
                     /gene="rimJ"
                     /locus_tag="JQ356_001323"
     CDS             complement(18561..19145)
                     /gene="rimJ"
                     /locus_tag="JQ356_001323"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HAY4621469.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
                     HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
     gene            19381..20589
                     /gene="mdtH"
                     /locus_tag="JQ356_001324"
     CDS             19381..20589
                     /gene="mdtH"
                     /locus_tag="JQ356_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HAY4621470.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
                     GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR
                     LMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY
                     MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR
                     AARRLLERDA"
     gene            20653..21300
                     /gene="grxB"
                     /locus_tag="JQ356_001325"
     CDS             20653..21300
                     /gene="grxB"
                     /locus_tag="JQ356_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HAY4621471.1"
                     /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
                     QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL
                     PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
                     PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI"
     gene            21434..21994
                     /locus_tag="JQ356_001326"
     CDS             21434..21994
                     /locus_tag="JQ356_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY4621472.1"
                     /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK
                     DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
                     VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
                     QGEAMAKKLAKGIEVKPGEIVIPFTD"
     gene            22100..23146
                     /gene="pyrC"
                     /locus_tag="JQ356_001327"
     CDS             22100..23146
                     /gene="pyrC"
                     /locus_tag="JQ356_001327"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HAY4621473.1"
                     /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMP
                     NLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA
                     KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREAHFIES
                     VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP
                     HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
                     GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
                     PFLAGETVRWSVKQ"
     gene            23220..23465
                     /gene="dinI"
                     /locus_tag="JQ356_001328"
     CDS             23220..23465
                     /gene="dinI"
                     /locus_tag="JQ356_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein I"
                     /protein_id="HAY4621474.1"
                     /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
                     AAANNLSVIGVTKEDKQRISEILQETWESADDWFVSE"
     gene            23755..24009
                     /gene="bssS"
                     /locus_tag="JQ356_001329"
     CDS             23755..24009
                     /gene="bssS"
                     /locus_tag="JQ356_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HAY4621475.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDFPVNEYRRH"
     gene            24124..25242
                     /gene="solA"
                     /locus_tag="JQ356_001330"
     CDS             24124..25242
                     /gene="solA"
                     /locus_tag="JQ356_001330"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HAY4621476.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLAN
                     VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
                     EAGCAQLFNCPVTAIRHDDDGVTIETVDGEYQAKKAIVCTGTWVKDLLPELPVQPVRK
                     VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
                     PFAEVVSDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
                     LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ"
     gene            25290..25403
                     /locus_tag="JQ356_001331"
     CDS             25290..25403
                     /locus_tag="JQ356_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2770 domain-containing protein"
                     /protein_id="HAY4621477.1"
                     /translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
     gene            25664..26230
                     /locus_tag="JQ356_001332"
     CDS             25664..26230
                     /locus_tag="JQ356_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HAY4621478.1"
                     /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFTLGLWMVTLSYYDGW
                     YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLF
                     AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
                     FMALKHHFIDKDDTLKRMLGKSSSDYGV"
     gene            26234..26809
                     /locus_tag="JQ356_001333"
     CDS             26234..26809
                     /locus_tag="JQ356_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HAY4621479.1"
                     /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY
                     PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGNDPWGGKRAGFEAEGK
                     IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
     gene            complement(26851..>27437)
                     /locus_tag="JQ356_001334"
     CDS             complement(26851..>27437)
                     /locus_tag="JQ356_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HAY4621480.1"
                     /translation="NHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYC
                     TGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGER
                     ISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPE
                     EQRRRRAGRENGNKIFNKSRGRLNTTLGIPDPTE"
BASE COUNT         6583 a         7305 c         6907 g         6642 t
ORIGIN      
        1 actgtgagta agcgggtgat aaatggtaaa agtcatcttg ctataacaag gcttgcagtg
       61 gaataatgaa gccgtttccg tgtccatcct tgttaaaaca agaaatttta cggaataacc
      121 cattttgccc gaccgatcat ccacgcagca atggcgtaag acgtattgat ctttcaggca
      181 gttagcgggc tgcgggttgc agtccttacc ggtagatgga aatatttctg gagagtaata
      241 cccagtctgt ttctttgata attgcgctgt ttttccgcat gaaaaacggg caaccgacac
      301 tctgcgcctc tttgagctga cgataaccgt gaggttggcg acgcgactag acacgaggcc
      361 atcggttcac acccggaaag gcgttacttt gcccgcagct tagtcgtcaa tgtaagaata
      421 atgagtaagt tacgatgaaa agaatgttaa tcaacgcaac tcagcaggaa gagttgcgcg
      481 ttgcccttgt agatgggcag cgtctgtatg acctggatat cgaaagtcca gggcacgagc
      541 agaaaaaggc aaacatctac aaaggtaaaa tcacccgcat tgaaccgagt ctggaagctg
      601 cttttgttga ttacggcgct gaacgtcacg gtttcctccc actaaaagaa attgcccgcg
      661 aatatttccc tgctaactac agtgctcatg gtcgtcccaa cattaaagat gtgttgcgtg
      721 aaggtcagga agtcattgtt cagatcgata aagaagagcg cggcaacaaa ggcgcggcat
      781 taaccacctt tatcagtctg gcgggtagct atctggttct gatgccgaac aacccgcgcg
      841 cgggtggcat ttctcgccgt atcgaaggcg acgaccgtac cgaattaaaa gaagcactgg
      901 caagccttga actgccggaa ggcatggggc ttatcgtgcg caccgctggc gtcggcaaat
      961 ctgctgaggc gctgcaatgg gatttaagct tccgtctgaa acactgggaa gccatcaaaa
     1021 aagccgctga aagccgcccg gccccgttcc tgattcatca ggagagcaac gtaatcgttc
     1081 gcgctttccg cgattactta cgccaggaca tcggcgaaat ccttatcgat aacccgaaag
     1141 tgctcgaact ggcacgtcag catatcgctg cattaggtcg cccggatttc agcagcaaaa
     1201 tcaaactgta caccggcgag atcccgctgt tcagccacta ccagatcgag tcgcagatcg
     1261 agtccgcctt ccagcgtgaa gtccgtctgc cgtccggtgg ttcgattgtt atcgacagta
     1321 ccgaagcgtt aactgccatc gacatcaact ccgcacgcgc gacccgcggc ggcgatatcg
     1381 aagaaaccgc gtttaacacc aacctcgaag ctgccgatga gattgctcgt cagctgcgcc
     1441 tgcgtgacct cggcggcctg attgttatcg acttcatcga catgacgcct gtacgccacc
     1501 agcgtgcggt agaaaaccgt ctgcgtgaag cggtgcgtca ggaccgtgcg cgtattcaaa
     1561 tcagccatat ttctcgcttt ggcctgctgg aaatgtcccg tcagcgcctg agcccatcac
     1621 tgggtgaatc cagtcatcac gtttgtccgc gttgttctgg tactggcacc gtgcgtgaca
     1681 acgaatcgct gtcgctctct attctgcgtc tgatcgaaga agaagcgctg aaagagaaca
     1741 cccaggaagt tcacgccatt gttcctgtac caatcgcttc ttacctgctg aatgaaaaac
     1801 gttctgcggt aaatgccatt gaaactcgtc aggacggtgt gcgctgcgtg attgtgccaa
     1861 acgatcagat ggaaaccccg cactaccacg tgctgcgcgt gcgtaaaggg gaagaaaccc
     1921 caaccttaag ctacatgctg ccgaagctgc atgaagaagc gatggcgctg ccgtctgaag
     1981 aagagttcgc tgaacgtaag cgtccggaac aacctgcgct ggcaaccttt gccatgccgg
     2041 atgtgccgcc agcgccaacg ccagctgaac ctgccgcgcc tgttgtagct ccagcaccga
     2101 aagctgcacc ggcaacacca gcagctcctg cacaacctgg gctgttgagc cgcttcttcg
     2161 gcgcactgaa agcgctgttc agcggtagtg aagaaaccaa accgaccgag caaccagcac
     2221 cgaaagcaga agcgaaaccg gaacgtcaac aggatcgtcg caagcctcgt cagaacaacc
     2281 gccgtgaccg taatgagcgc cgcgacaccc gtagtgaacg tactgaaggc agcgataatc
     2341 gcgaagaaaa ccgtcgtaat cgtcgccagg cacagcagca gactgccgag acgcgtgaga
     2401 gccgtcagca agctgaggta acggaaaaag cacgtaccac cgacgagcag caagcgccgc
     2461 gtcgtgaacg tagccgccgc cgtaacgatg ataaacgtca ggcgcaacaa gaagcgaagg
     2521 cgctgaatgt tgaagagcaa tctgttcagg aaaccgaaca ggaagaacgt gtacgtccgg
     2581 ttcagccgcg tcgtaaacag cgtcagctca atcagaaagt gcgttacgag caaagcgtag
     2641 ccgaagaagc ggtagtcgca ccggtggttg aagaaactgc cgctgccgaa ccaattgttc
     2701 aggaagctcc agctccacgc acagaactgg tgaaagtccc gctgccagtc gtagcgcaaa
     2761 ctgcaccaga acagcaagaa gagaacaatg ctgataaccg tgacaacggt ggcatgccgc
     2821 gtcgttctcg ccgctcgcct cgtcacctgc gcgtgagtgg tcagcgtcgt cgtcgctatc
     2881 gtgacgagcg ttatccaacc cagtcgccaa tgccgttgac cgtagcgtgc gcgtctccgg
     2941 aactggcctc tggcaaagtc tggatccgct atccaattgt acgtccgcaa gatgtacaag
     3001 ttgaagagca gcgcgaacag gaagaagtac aagtgcagcc gatggtgact gaggtccctg
     3061 tcgccgccgc tgtcgaaccg gttgttagcg cgccagttgt tgaagaaatg gctgaagtcg
     3121 tagaagcccc cgtaccggtt gccgaaccgc aaccggaagt ggttgaaacg acgcatcctg
     3181 aagtgattgc cgccgcggta actgaacagc cgcaggtgat taccgagtct gatgttgccg
     3241 tagcccagga agttgcagaa cacgcagaac cggtggttga accgcaggaa gagacggcag
     3301 atattgaaga agttgccgaa actgctgagg ttgtggttgc agaacctgaa gttgttgctc
     3361 aacctgccgc gccagtcgtc gctgaagtcg cagcagaagt tgaaacggta gccgcggttg
     3421 aaccagagat caccgttgag cataaccacg ctaccgcgcc aatgacgcgc gctccggcac
     3481 cggaatatgt tccggaggca ccgcatcaca gtgactggca gcgccctact tttgccttcg
     3541 aaggtaaagg tgccgcaggt ggtcatacgg caacgcatca tgcctctgcc gctcctgcgc
     3601 gtccgcaacc tgttgagtaa taattagctc aaagtaatca agccctggta actgccaggg
     3661 cttttttatt tcatgtttga atcaacatat taaaattcat caaatggcat ccttgctaac
     3721 caacaatgca aaataggcaa aaaaaatgcc cgccccggcg atccctgagc gggcagacaa
     3781 aacataccca gtttcatgat atgttttaaa gcgagcttat ttgttgagct ggaagagcga
     3841 caatccctgc atatcggtaa atgctttata cgatgcctgc aatgccgttt gctgcatgat
     3901 gtaagatgaa atagttgcat tccagtccac atcaaccaga tcgctcatct gctgcgtttg
     3961 ccctaaagcg cgatcgctac ctaaggaatc cagcgactcc agttcgttca gctgcgtgcc
     4021 taattccgcg cgaacggcaa ggacattatt cagcgagttt ttcagtccac ggttggtttt
     4081 atccaatgcc gcagcggcga tttctttatc cgcttcgcta tccgcgaccg gcgttttcag
     4141 ggctgcgatg gcgctatcca gcatggcaaa aagattggtt tcagaagcgc taccgtctgg
     4201 ctccgcaact gcgttgctgg taatactgtc gaaaattttg tcacccgtgt gccctatcac
     4261 catcgaacgc gaagcatcga cctgttgctt aatactttct gctccaccga cgtatttccc
     4321 tttctcttcg ctaaacggcg cagtctctgt tttataaccg gcaaaaatgt agcgcccgtt
     4381 accgtcagtg gtgttcgcca gattcagcaa ctggtcacga agcccctgaa tatccgtagc
     4441 cagcgaggcc cggtcatcgt cactcaaggt gccattgctg gcgtagacaa ttttttcctg
     4501 agcattctgg atagcagtgg tgacctggct aagtacactc tcttccagtg acactttttg
     4561 aatggcgaaa gtacgcgcca gcgtgtactg gctgttttgc gcctgtgcct gggagagaac
     4621 tacggcttgt gatgctgcaa tgggatcgtc agaagggtta acgactcgct tacctgtcga
     4681 catctgctcg ccgtacttca tccattccgc ctgagaattg gtgatgccac gcatgttttg
     4741 ctggtacatc atctgggtac tgaaacgcat cttatctccc cttagcgaat gttaatcagc
     4801 gcatcaaaaa tcgcgtttgc cgtctgcaga acctgcgcat tcgccaggta atactgctga
     4861 aaacgttgca gatttccgta ctcttcgtcg agattgacgc cagagataga ctgctgctga
     4921 ttggaaagct gcgtcaccac attaccttgc gtggcgctac tggttttcaa cgtctcggtt
     4981 ttattaccga tatcactcac taacgaggca taagcgtcgt taaaggattt cgcaccgccc
     5041 accgttttac tgttgctttg cagatccagc agggcctgac cgttgcggtt atcgctatca
     5101 cccgcatctt tttcgctcgc catcgctatt ttcgcttcgt cggtgattaa tacatccatg
     5161 ttgacgatgg cgtcacttac tggtttcagc gtgaagctgt cgttaacggc aggcgttcct
     5221 gtaaacgtca actccagacc atcaaatgcc actttaccgt tggcatccgg cgtcaccgta
     5281 aaagtggtat tgctggcaag gcgggtgacc tgccactgat tattatcgaa cgagattttg
     5341 taatctgtcg ccagtaccgc ggaggcatca gttaccgtgg caccgatcgc aacgtcacct
     5401 ttgtttttcg tgttttgcaa aaccgcgggc ttaccgatag caaagaaatc ttcaccagca
     5461 tcgccgttgg catcaaatcc ggctttgtgt tgggtgttga aagcctcggc aaatgccagc
     5521 gccagttgtc caagcgtatt acgcgtctgg tccagatcct gagaacggaa tgtcagaatg
     5581 ccgcccagcg acccggtatt cagtaatttc tccgggatct caatattgcc tgccgtccca
     5641 tcaacgtaag cgacagtcgt acgagaaggg tcggcgctgg aaggaactgc cgccagttgc
     5701 cgcgccgtac ttccctgaac cagtgagtaa ccattggcca tcgtgatgtt ataagtgccg
     5761 ccatcctgaa cgctgacttc tacaccaaca atctggttta attcgctcac cagttgatcg
     5821 cgttgatcca gcagattgtt aggtgacgcc cctgccccca cgcctgtcag gcgggagatt
     5881 tggtcgttca ggctggcgat ttgtttagcg taattgttga tctgatcaac gctggcacct
     5941 atcgcgatat tgacctgttt gtcctggtca cgaagatact gatcggtggt tttaaactga
     6001 ttcaccaacc cttctgattt cccaatcagc gcctggcgcg ctgccgggtc ttccgcgtta
     6061 ctcaccagcg tttgcaggct ggtgaagaaa tcctgcatct gtgttgccag cgaagaggta
     6121 ctggtggaga gcatattgtc gattttcgac atctgctcat agcgggcagt caggccgcta
     6181 ctttgcgtct gcgccgcacg taactggttg gtgataaacg catcatactc acgctgcaca
     6241 ccagaaacgt agacaccatt gccaacccag ccgccagcgc ccaacgtgct attggcctgc
     6301 gccataatag tggtttggcg ggtatatccg gcaacgttat agctggagat attattactt
     6361 gccgtattta acgccgcctg ggccgcgttc agtccgctca tggcgttatt aatcaagctg
     6421 gacatggagg ttccttataa gccttcaatt acagagtatt atcggcagcg acccgccgga
     6481 cttgagttat tcaaaacaga ttatcaatgt tcatactgta ggttttgctc accttgtcgc
     6541 ttatcgattt catctgctga atcatgttgg tgagtttgcg ggcatagtga ggatcggtgg
     6601 catagcccgc gtcctgtagg gcctgcgccc cctgctccgc actcgtggcg gtggtcacgg
     6661 cggcgtagcg cgggttacgc gttaacagcc caacgtaatc cgactatgct tccagatacg
     6721 agctgtagac ccgaaacttc gcttttactt tcttcgcttc gccgttttca tattcagtcg
     6781 tggtgatttc agtaactggc cctttccagt tgccagaggc tttgacacca aacaggttat
     6841 agctcggctc gccgttttcg cggcggattt gccgttgccc ccaaccagat tccagcgccg
     6901 cctgagcgag gatcaaatga tgtggcacac cgctttgctg gcttgccagt tgggcgggca
     6961 gcgagagttg cgcgaggaat gctttactgt cacccggcag cgaatcatcg tagttacgtg
     7021 gcacggcctt ttgcaccagc tgcgaaagcg cctgattttg ataacgcacc acagtttcga
     7081 gcgggaattt catcggtgct gctggcgtgg actcctctgg caatggttgt tctggcgtca
     7141 tctgtttaac catcatctct gcaagcccca gacctttgcc cgccgtcatc tgttgggcaa
     7201 tctgctggtc atacatactg gtatacaggc gagtgtgctc gctgctgaac aggccatctt
     7261 ttggtaaagc gtcgcgcatg cttttcaaca tcatctgcac gaacatccct tccacctgac
     7321 gggccaccgg acggatattt gccgccggat cttcgcccgc tttcgccttt agttcgttga
     7381 gtgattgcgc atcccaggcc gcacttgcca gtagtttgct atcgctgatc atcagatgat
     7441 ttccagtttt gcccgcagac atcccgcact ttgcattgat tgcagtatgg acatcagatc
     7501 catcggcgta gcgcccagcg cattgagcgc gcgcaccacg ttattgagcc tggcgctgga
     7561 acgtacgctt tgcagcgaac cgccgctctg gcgtaaatcg atctgcgttt gtggagtaac
     7621 cacagtctgt ccaccaccaa acggtgtatc tggctggctg acattggcct gacgattaac
     7681 tgttactgag agattcccct gcgctaccgc gcagctgtcg agggtcactt cgcgattcat
     7741 caccaccgaa ccggtgcgcg agttaatcac tactttagcg tcctgcgggg tgacattaac
     7801 ctgcatattc tggatatcgg caaggaagcg gacctgggaa ctgttgccac tcggtacgcg
     7861 cacctgaata gtccgcgcat ctaacgcggt ggcgctgcca tatccacgca cgcggttgat
     7921 ggtgtcagcg atttgctgcg ccatgctgaa atcttcgtcg ttaagttgca aattaagggt
     7981 attcccgacg ccaaactggc tgggcaattc acgttcaata accgcaccat tggtgatccg
     8041 tccaccgttc agttggttaa cctgaacact gctaccgcca gcggaggctc ctgcgccgct
     8101 aaccagaata ttgccctgcg ccagcgcata cacctgactg tcaacgccct taagcggtgt
     8161 catcaacaac gtacctccac gcaagctttt ggcattaccc atggaagaaa ccaccacatc
     8221 gatggtttgc ccctgacgtc caaacggagg aagtgacgct gtcaccatta ccgcagcgac
     8281 gttttttagc tgcatattgg tgcccgtcgg aacggtaatt cccagctgtg agagcatgtt
     8341 attaagcgtt tgtgtggtaa acggcgtctg ggttgtctgg tcaccggtgc catccagccc
     8401 caccaccaga ccatagccaa tcagtgagtt ttgccttacc ccctgaacac tggtgagatc
     8461 gcgaatacgc tcagcctgag ccgccgtcgt gaccagtaga agaattaatg cagagagaaa
     8521 tttaatcacc acagcctcac ttacattggc gacaggttaa ggaagaaacg ctgcaaccag
     8581 cccatatttt gcgcttcgtt aatgtagcca ttgcctacgt attcaatgcg cgcatccacc
     8641 acctgagtag acggtacggt attgctgccg ctgatagtgc gtggattaac cacgccagag
     8701 aagcgaataa attcggtacc ctgattaatg gcaatctgtt tttcacccac cacatgcagg
     8761 ttgccgttga ccagtacctg gtcaaccgtc accgtcaacg tgccgctaaa ggtattgctg
     8821 gcattggccc cgccctttcc gttgaacgtg ttaccaccgg aggcttcgac atcggcacga
     8881 gcgttaccaa acagcccctg caaatagcgc ggcacagtat caaagccaaa attagtttta
     8941 ccgtcacggc tggcattcgc agaggagctt ttgctggcgc tgacgttctc ctgcaacacg
     9001 atggtcagcg tatcgccaat attgcgtggt cgacgatctt caaacagcgg ttgatagcca
     9061 tagttaatcg gctgagcaga ctggaaaata gaaccgttgg cgacgggcgt cggaccggga
     9121 accggttgtg cactggtcgc cccctgcacc agcggcgtgg agggtatcca ggcgcagccg
     9181 gttagtgaaa gcaccaacaa gctggaaatg gcataagtat gcgcagcgtt tttttgcatg
     9241 gctatcatct tcaaaaatca gtaaaccggt gaacctgcca ccggttaagc cttagagttg
     9301 cgtcagtttt tgctgcatct gatcggtggt ggacaccgct ttactgttga tttcgtaagc
     9361 gcgttgcacc tgaatcatat tgaccagttc ttccgccacg ttgacgttag acgtttcaac
     9421 atacccttga tacagcaatc ccgcgccgtt caggcccggc gtgctttcgt tcggtgcacc
     9481 agaggattgc gtttcggtgt agaggttttc gccaatgctc tccagcccgg tgtcattcat
     9541 aaaggtggtg agattgagct gcccaacctg aaccggagct gcctggcctt gttgggttac
     9601 gctgaccacg ccatcacgac cgatggtgat acttaacgca ttcgccggaa tggtgatcgc
     9661 tggctgcacc tgaaaaccac cagccgtcac cagctgcccg ttctgatcca cctggaaaga
     9721 gccgtcacgg gtataggctg atgaaccatc tggcaacatc acctggaaaa agccctgccc
     9781 tttaatcgcg acatctttgc tgttgttggt ctgcgacaga tttccctggc tgtgtaagcg
     9841 ttcagtggcg accgggcgta cccccgtgcc gatttgtaat ccggagggta aggtggtttg
     9901 ttcggaagac tgtgcccccg gctggcgaat ggtttgataa agcagatctt caaacaccgc
     9961 gcgctgacgc ttaaaaccgt tagtactgac gtttgccagg ttgttggcaa tgacgtccat
    10021 attggtttgc tgggcgtcaa ggcccgtttt ggcgatccat aatgaactga tcataaaatg
    10081 tcctgtagtg gattagtgac aagcagagca gaagcacgcg acagtgtgaa ttccccctca
    10141 ctctaaccct ctccccaaag gggcgaggga atagtccgcg cgcttttatt gcaatgtcat
    10201 caatcgttca attaactcat cgacagcagt tggttggcac ggcctgcgtt atcatcgacg
    10261 ctgctgatca ccttcatctg catttcaaaa cgccgcgcgc tggcaatcat gtcgctcatt
    10321 gccgcaacgg cattgacgtt actgccttcc agaacccccg acatcacacg caaggttaga
    10381 tctgcctgca gtaccggccc tcgcgtggcc tgggtttctg cgcttaaacg aaaaatgccg
    10441 tcgtcaccgc gctgcacttc gctgcccgtg gctttcacca gtttcagacg ccctactggc
    10501 gcaactgtat ttgccggatc gcccggattg agcgccgaga ttgtgccatc ggcagcaata
    10561 gtgatttccg ctccttccgg cacagcaatt ggccccgcct cgcctatcac ctgatgcccc
    10621 tgaattgtca gttgcccggt gggatcaacc tgaatgctgc cattacgcgt atacccttcg
    10681 ctgccgtcag cggtctgcac ggccagccag ccatcctgct gcaacgcaac gtccagcggg
    10741 cgcgaggtgt aatctatctt gccgggcgtc atgtctgcac ccggtgttga cgccgttacc
    10801 agcgtgcgcg tgggcagtga aagcccttcc accggcactg cgcgcaaggc gtttaactgc
    10861 gcgcgaaaac cgggcgtaga ggcattggcc agattactgg cggttaccgc ctgttgattc
    10921 agcgtctggc tggctgctcc catcgcagta taaattgcgt gatccattga gctatcccgt
    10981 cagcgattag cgtaagttaa ccagcgtgtt gaggatctgg tcctgggttt tgatggtctg
    11041 ggcgttagac tgatagttac gctgggcaac gatcatattg accagttctt tactgagatc
    11101 gacgttggac gcttccagcg caccgttggt cagggtgcca aagtttcccg tcccggctgt
    11161 ccccaacagc gccacgccag aagattgcgt cgcagaccag acgttgtcgc cttcggatgc
    11221 cagaccttcg ttgttggcaa agttcgccag tacaatctgc cccagcagtt gagtttgttc
    11281 gttggaatag ttgccgacaa ccgtaccgtc atcattgatt tgataactca ccagatcgcc
    11341 cggtttgtag ccgttctggg gggttgccac aatattgtta gcgccggtat tttgctgcat
    11401 ggagttgagg aagctcagac taaacgtggc gggttctgca ccgttaattg cgccggttgc
    11461 gatattattc gccatcgcac catccactaa tgtgccatta gcattaaatt ccagtgttgt
    11521 cgctgtcttc gcaatgctgt ttggatcact gctatcctgg gtgtagacct gccagttatt
    11581 atccccggtc ttcacaaagt agacgctcat gtcatgagca ttaccctgac tgtcgaaaac
    11641 agtcaccgaa ccttttttgt tatagctatc cgcattgctg gcgctgaatg gcgtaacagt
    11701 aggaagcgga tcactggaat tcaggttgat ctgcatcgac gccgtggtgg tagttttcgc
    11761 tgccatcagg gtattcggga tcgaaatatt ggtcggattc gccccttgct gaatagtcgg
    11821 cggcgtaccg gttgccgggt aacccgtcag ctgtaaacct tgcatattca ccaggttacg
    11881 gttttcatcc agcttaaatt gtccgttacg gctgtagaac accgaaccgt tgctgtctac
    11941 cagacggaaa aaaccgttct ggctgatagc aacgtccaga cctcgcccgg tgttggtggt
    12001 cgtgccatct gtaaagtcct gagtgatacc ggcaactttt acccccagtc ccactttcga
    12061 accggcaaac atatcggcaa aagaggccgt gcctgattta aagccgtagg tggcggagtt
    12121 ggcaatattg ttgccaataa catcgaggtt agtggcggca gcgtttaatc cgctaaccgc
    12181 ttgagaaaag gccatgactg actcctgaaa tgtgaaggct taaattatct gccgtacttc
    12241 gtcgagggtg gtggtgccgt aagtgccgag atccagcgta ttaccgctgt tgccgcggat
    12301 cacaccctgc accagagcaa actgcagcgg ctgggcaacc agttgtgtac caccgttact
    12361 ggcggtaatc gctacattgt aagaaccgtt cggcgcagtg ctgccatcag tcaacgtacc
    12421 gtcccaggtg aaactgtgaa ctccggcggt cagttcacca atatcaatgg tgcgcacaac
    12481 cgcgccattt ttatcggtga tggtggccgt aactttgtct gccacctgtt gcagctcaac
    12541 accaaacggc gtggtcgtgg tcacagcccc ttcttcactg ccggttcccg caagaacagt
    12601 tgtgccgggg atcatcacgc cgtgaccgat caggttactg gcctgtaacg actggctgtt
    12661 atcaatctgt ccggaaatag atccgagcat ggtattgagt ttttcaatcc cgctgaccgt
    12721 gctgatttgt gccaattgcg acgtcagctc gttgttttcc attggattgg tcgggtcctg
    12781 gtttttcagc tgcgccacca gcaaagtcag aaaactgctt tgtaaatctg cggcgttgct
    12841 gcccgtgagc gaactactgc tggtggtact gacgccggta tttgtcggat cggtggtggt
    12901 taccgcaatg gacatagctt tctcctttat tgaccgagcg taagggtttt cagcatcatg
    12961 cttttcaccg tgttgagcac ttcaacattg gcctgatagc tgcgtgacgc cgacatggtg
    13021 ttaaccatct ctccgacaac atcaacgttc ggcattttta cgtagccctt tgcatccgcc
    13081 agcggattac ccggttcata aaccagtttg tccggggcct gactttctat aacatcggca
    13141 acctttacgc cgcctgtcgc agcacctggt gcagcgttaa cctggaatac cacctgtttt
    13201 gcccgatatg gctgtccatc gggaccggtc acgctatcag cattcgccag attactggcc
    13261 gccacgttca ggcgctggga ctgggcagtt aacgccgacc cggcgatatc aaaaatattc
    13321 agcagtgcca tccgttaatt tccgctctgt aaaacgttca tcatgccttt gatttgcccg
    13381 ctcaacgcac taaggctcat ctggtattgc agttctgcgg taggaggcgt cagcgcctgc
    13441 gccggaatgt gttgcgttga ggtcatcgtc agagcaacca cactggttgc atcccgtcca
    13501 cgttgcatga cttttttaag ttcactggca aaatcgatat cgcgcgcctg ataaccaagg
    13561 gtatcggcat tggcgatgtt tgctgccagc acttcctgac gctgggcgcg cagattgagc
    13621 gcctcttgtt gaaaacgtaa ggcggcgtcg agcttatcga gcatatctcc tccgcaggta
    13681 tcaaaattct gccatcagct taaatgcctt tacgcgcgcg ttatcggcgg aataaacgca
    13741 aaatgggtcg ctatttatgc cgttgatgac cattggggac gggtacaatt cacgttgtag
    13801 aaatagctgg ggggcgaaaa tgctggcaat aaaacgtagc gtggcgatca tcgcgatact
    13861 gttcagtccg ttaagtgcgg cgagcaatct cacatcgcaa ttgcacacct tttttagcgc
    13921 ccagctcgtg ggggtaagtg atgaggttcg tgtttctatt cgtacagcac ccaatctact
    13981 accgccgtgc gagcagccat tgctttcgat gagcaataat tcccgcctgt ggggcaatgt
    14041 gaatgtgttg gcacgctgcg gtaacgacaa acgatattta caggttaatg tgcaggccac
    14101 aggaaattat gtggttgccg cgatgcccat tgtgcgggga ggaaagctgg aagctggcaa
    14161 tgtcaaacta aaacgcggac gactggatac cctgccaccg cgtacggtgc tggatatcaa
    14221 tcaacttgtt gatgccatta gcctacgcga tctatcaccc gatcaaccaa tccaattaac
    14281 ccattttcgc caggcatggc gggtaaaagc gggacaacgc gtcaacgtga tcgccagcgg
    14341 tgacgggttt agcgccaacg cagaaggtca ggcgctgaac aatgcagccg tcgcacagaa
    14401 tgcgcggatg cgcatggtat cgggactggt ggtcagcggc gttgttgatg cagatgggaa
    14461 tattcttata aacctgtaag ctgttaaaga ttacccgtcc cttgccgata aataagcaac
    14521 acatgataaa agcgccctca atgaggaata aaccatgagt attgatcgca cttcgcctct
    14581 gaatcccgta agcaccgttc aaccgcgcga aaccactgac gcgccggtaa cgaacacccg
    14641 ggcggcaaaa acaaccgact ccaccagcac cagcaccagc accagcacca gcaccagtgt
    14701 gacgttaagc gacgcgcaag caaaactgat gcaacccggc agcagtgata tcaatcttga
    14761 acgtgtcgaa gcgttaaaac tggcgattcg taacggtgaa ctaaaaatgg acatcggcaa
    14821 aattgccgat gcgctgatca acgaagctca gcaagacttg cagagtaact gatcgtatga
    14881 cacgtcttgc agagatcctt gaccagatgt ccgctgtgct taacgatctc aaaacggtaa
    14941 tggatcaaga gcagcaacat ctctctatgg ggcagatcaa cggcagccag ttgcaatgga
    15001 ttacagaaca aaaaagctca ctgctggcga cgctggatta cctcgaacag ttacgcaaga
    15061 aagaacccaa tacagcaaat agcgttgata ttagtcaacg ctggcaggaa attactgtga
    15121 aaacgcagca actacgccaa atgaatcaac ataacggttg gttactggaa ggacagattg
    15181 agcgcaatca acaggcgctg gaaatgttga aaccgcatca ggaaccgacg ctatatgggg
    15241 cgaacggtca gacctcaaca acccatcgcg gcggtaaaaa gatttcgatc tgaagattat
    15301 ctccggcctg cactgcaggc cggaatgcat tgttacaccg tccggcgggc aaattcttta
    15361 actttgaagc ccagtaccgc cagtgcagcg aagtacgcgg caatccccgc cagcacgacc
    15421 gccattaaac gcagtaagcg ccagggcatg gtacccaatg accactccgg catgatatgt
    15481 aacataccta aaagcacgcc agacatcacc agtaccgcca ccaccagacg caacagaaac
    15541 gccatccagc cgggttgcgg agtaaagatt ttctgcttac gcaactgcca gtaaagcagc
    15601 gaagcattca gacacgccgc cagaccaata gaaagtgaca gcccggcatg tttcaacgga
    15661 ccaataaacg ccaggttcat caattgcgtt aaaatcagcg taacgatggc aattttcact
    15721 ggcgttttaa tgtcctggcg ggaataaaag ccaggagcca acactttcac tacaatcagg
    15781 ccaatcaaac ccaccgagta ggcaattaac gcccgctggg tcatcagcgc atcaaacgcg
    15841 gtaaatttac cgtactggaa cagcgaaacg gttaacggac ctgaaagaat gcccaacgca
    15901 accgcactcg gcagcgccaa caggaaacaa agacgcaacc cccagtccat caaacggttg
    15961 tattcatcat gattgccact ggcaaaactt ttcgacagcg acggcagcaa aatggtgcca
    16021 agcgccacgc ccagcacacc ggacggaaac tccattaagc ggtcggcgta atacatccaa
    16081 gacaccgaac cggaagcaag aaacgaggca aaaatggtgt tgatgattaa ggagatctgg
    16141 ctcacagaga cgccaaggat cgccggtccc atctgtttca ccacgcgcat tgctccggca
    16201 tcgtggaagt taatgcgcgg caggaccagc atgccgatct tcttcaggtg cggtagctga
    16261 tacaccagct gcaggatgcc gccgaccgta acagcccacg ccagcgccag caccggtggg
    16321 ttaaagtacg gtgcggcaaa cagcgcgaaa ccaatcatgc tgatgttaag cagtgttggc
    16381 gcaaacgccg gaatcgagaa gcggttccac gtattcagaa tcgctcccac cagcgacgcc
    16441 agggagatca gcaagatata gggaaaggta atctttagta gctggctggt cagggcaaat
    16501 ttgtcagctg tatcagcgaa gcctggcgcg gtcaccatga tcacccacgg tgcggcgagc
    16561 atgccagcga ccgtcacaac cgccagcgca agtgtcagca ggccagaaac ataagagaca
    16621 aagacccgcg tggcgtcttc accctgctta cttttatatt ccgccagaat cggtacaaat
    16681 gcctgggaaa atgccccttc ggcaaagata cggcgtaaca agttaggaag tttaaaagcg
    16741 acgaaaaagg cgtcggttgc catccctgcg ccaaagattc tggcgacaat tgcgtctcgt
    16801 gcgaagccaa gcacacgcga aaacatggtc atcgagctga cggcggccag cgattttaat
    16861 aaattcatcg gtgttctaat ccagaccaac gggcaaaacg cctgcaagac aggcgctgaa
    16921 agaggcgaat agtctacctg gattatggtg aattgctacc gccagatgtt acagggttta
    16981 ttcactcatc gcatcgcgcc agatcttgtc aacgatacgt tgcgccagca cggcctattc
    17041 gccggcggtt tgcggaactg tctgattttg cacacattca atgaagtgcc gcgcacagcc
    17101 gacaaatcca cgttgttcaa gagtgctctg ccaaccagga atcggtttat gcactacgcc
    17161 ctgcccgcgc tcctcacgcc attcgcgcat atccgtaatg tcgatgagcg caccgtcagt
    17221 cacggcctgc acggtttcac gctgacttcc ggcacggcga tgcatacagg tggtgatctg
    17281 caaaggaccg gccgaaaaat ggtgctcggc aaacagcatt tcgccagcgt cgttagtcag
    17341 tagcgtaccg ccatccagag aggctttgcc gcccgacaac cacagcgcgg tatccaccac
    17401 atgcagataa tcatccagca acgtgaaata aagatcgtgt ggcccgacac tattgctacg
    17461 atgtttatcc attcttagcg aagctgcggt agcgagttgc gtttttaact caccgtagag
    17521 tggtgcgaaa cgacggttaa aaccgaccat caacgtcagt tttttccgcg ccgccagttc
    17581 caccagccgt tcagcatcgc gcagattttc tgccagcggt ttatcgacac agacatgtac
    17641 acccgcattg agtaacgtac tgaccacgtc aaagtggctg gcggtgctgg aatgcacaaa
    17701 aaccgcatcg caactggcgg caaggctgga taacgaatcg gcataaggaa tgcgccagct
    17761 ttcacaaatt ggcagggctt tcgcgcgcgt aggcgaccag gctccttgta acatccagtc
    17821 agacgctgcc gccagcaccg gtaaccacgc tttttgcgca atgccgccta atcccacaac
    17881 gccgatacgt aattttttca ctttaatctc ccagatgggc cagcaacgaa tcaagacgct
    17941 gtttcagttc tgccacttcg atttccaggg cttcgacgcg ggcctgtaaa tcaccatcaa
    18001 ccgcgttcga catatccgtt accgccggct gatcctctac ctcaccactg aaaagatgca
    18061 tgtagcggct ttcgcgttta cccggttcgc gggccagacg caccacaaaa ggaccatctt
    18121 cgcgatttgc cagttgttcc agcgtcgact ccaattccgc catatcgctg aattcataca
    18181 ttcgcgcggc gcggctgcgc agttcacccg gcgtctgggc accacgcaat aacaacgtgg
    18241 tgattaacgc cacttccgct gcgctcagtt tcagatcgcc aaattctgaa ttacaaaaac
    18301 gttgttcata tttggtgacc cgattaccaa agccactcac cgtgcgcaga taatggcgtt
    18361 tgaccagatt atccagttgc tcctgcactt cagattcact cagattcatg accggttcac
    18421 ggttcgtttt ctgattacag gccgtgacta caccattgac tgagagcggg tattgctccg
    18481 gcgtggtcac ctgcttttcc agcaagcaac caatcacgcg agcttcaagg gcagtaagtt
    18541 gatatttcat gagattctcc ttagcggccg ggcgtccagt ctggggtagt taatgccgtc
    18601 agtacgtgat cgcgccattg tccatcaatc aacagatagt ctttcgcata gccttctttt
    18661 tcaaaaccca gtcgcgccag taaatcaccg ctgcgtttat tgtgcggcat ataattagcc
    18721 ataatgcgat gaatatgttg ggtgcgctgc atataacgaa tggctgcggt cagggcttca
    18781 aacatgagtc ctttgccctg ccatttttgc ccaatcgaat aaccgagata gcaggcatga
    18841 aaagagccac gaacaacatt ggaaaaattg gcaacgccaa taatctcttt ttcgtccggg
    18901 tcgaataagc caaagtagaa agctgaacct tgtttatgaa attcgttaat catccccagc
    18961 ctggcctgcc agcctgatgg ataacagtgg ctttcgtcgc gcactggctc ccagggcttg
    19021 aggaaatggc gattctctgc gtaataatcc gcaagacgcc aggcatcacg atcatgcacc
    19081 agacgcacga ccagtcggtc tgtggttaag cgcacttttg gcacgttact gcgatagcca
    19141 aacattctat acctactcct tcccgtaacg tctttaatac gctgtaagta ttactatacc
    19201 tgcgcaacca gaccctgtga aaagtccaaa atgccatttt ctgcattatt cacatatttg
    19261 ataaaaactc tctatcaaag cgacgttttg ataaaaaaat attgtccccg aagtgatggg
    19321 aaaagtctta gcggcaatgc agaatagaaa gtgctcatct tttatttccc gggaggggaa
    19381 atgtcccgcg tatcgcaggc gaggaacctg ggtaaatatt tcctgctcat cgataatatg
    19441 ctggtcgtgc tggggttctt tgttgtcttc ccgctgatct ctatccgctt cgttgatcaa
    19501 atgggctggg ccgccgtcat ggtcggtatt gctctcggtc tacgccagtt tattcagcaa
    19561 ggtctgggta ttttcggcgg cgcaattgcc gaccgctttg gtgccaaacc gatgattgtt
    19621 accggtatgc tgatgcgcgc cgccggattc gccacaatgg gtatcgccca cgaaccgtgg
    19681 ctattgtggt tttcatgcct gctctcggga ctcggcggca cgttgtttga tccgccgcgt
    19741 tcggcgctgg tggtgaaact aatccgtcca caacaacgtg gtcgtttttt ctcgctgttg
    19801 atgatgcagg acagtgccgg tgcggtcatt ggcgcattgt tggggagctg gctgttgcaa
    19861 tacgactttc gcctggtctg cgccacaggg gccgttttgt ttgtgctgtg tgcggcgttc
    19921 aatgcgtggt tgttaccggc atggaaactc tccaccgtac gcacgcccgt tcgcgaaggc
    19981 atgacccgcg tgatgcgtga caagcgtttt gtcacctatg tcctgacgct ggcgggttac
    20041 tacatgctgg ctgtacaagt gatgctgatg ctgccaatta tggtcaacga cgtggctggc
    20101 gcgccctctg ccgttaaatg gatgtatgcc attgaagcgt gtctgtcgtt aacgttgctc
    20161 taccctatcg cccgctggag tgaaaagcat tttcgtctgg aacaccggtt gatggctggg
    20221 ctgttgataa tgtcattaag catgatgccg gtgggcatgg tcagcggcct gcaacaactt
    20281 ttcaccctga tttgtctgtt ttatatcggg tcgatcattg ccgagcctgc gcgtgaaacc
    20341 ttaagtgctt cgctggcgga cgcaagagct cgcggcagct atatggggtt tagccgtctg
    20401 ggtctggcga ttggcggcgc tattggttat atcggtggtg gctggctgtt tgacctgggc
    20461 aaatcggcgc accagccaga gcttccgtgg atgatgctgg gaattattgg catcttcact
    20521 ttccttgcgc tgggttggca gtttagtcag aaacgcgccg cgcgtcgttt gctggaacgc
    20581 gacgcctgat ttgatactcc cccctgactc ctccatactg aaagtgaact gacagccaaa
    20641 tggaggagtc acgtgaagct atacatttac gatcactgcc cttactgcct caaagcccgc
    20701 atgattttcg gcctgaaaaa tatccccgtc gaattacatg ttctgctcaa cgacgacgca
    20761 gaaacaccca cccggatggt cggtcaaaaa caggttccca ttctgcaaaa agatgacagc
    20821 cgctatatgc cagaaagcat ggatatcgtt cactatgtcg ataaactcga cggcaaaccg
    20881 ttactgaccg gcaaacgttc ccctgccatt gaagagtggc tgcgcaaggt caatggctac
    20941 gccaacaaac tgctgttgcc gcgttttgcc aaatcggcat ttgatgagtt ttctactccc
    21001 gccgcgcgca aatatttcgt cgacaagaaa gaggccagcg cgggtaattt tgccgacctg
    21061 ctggcccact ctgacggtct gattaagaat atcagcgatg atttgcgtgc gctggacaaa
    21121 ctgatcgtca aaccgaacgc cgtgaatgga gaactttcgg aagatgatat tcagctattt
    21181 ccgctactgc gtaatctgac gctggtagcc ggaatcaact ggccaagccg cgttgctgat
    21241 taccgcgata atatggcgaa acagacacaa atcaatttgt tatcatcaat ggcgatttaa
    21301 tcctgacccg ccgcggcagc ctgtattcgc gggttgccgc cgttttcagt tttttctgct
    21361 ggcgagttta tcgctggtga cacatgctgc gttgtgtcag gatattgacg cagatttcat
    21421 gtcgaggact accatgaaca agtttttatt tgccgctgca ttgatcgtca gtggcctgct
    21481 cgttggctgt aatcaactca cccaatacac catcaccgaa caagaaatta accagtcgct
    21541 tgcgaaacat aataatttct caaaagatat cggtttaccc ggcgtggctg acgcccatat
    21601 tgttctgaca aacttgacca gccaaattgg tcgcgaagag ccgaataagg ttaccctaac
    21661 cggagacgcc aatctggaca tgaactccct gttcggtagt cagaaagcga ccatgaaact
    21721 gaagctgaaa gcgctgcccg tgtttgataa agaaaaaggt gcgatcttcc tgaaagagat
    21781 ggaagtggtc gatgcgacgg tacaaccgga aaaaatgcaa acggtgatgc aaacgttgct
    21841 tccctatttg aaccaggcat tacgcaatta ctttaaccag caacctgctt acgtcctgcg
    21901 cgaagatggc agtcagggcg aagcaatggc gaaaaaactg gcgaaaggca ttgaagtgaa
    21961 gccaggcgaa attgtcattc cgtttacgga ttaatgacga gggcgcattc gcgcccttta
    22021 tttttcgtgc aaaggaaaac gtttccgctt atcctttgtg tccggcaaaa acatcccttc
    22081 agccggagca tagagattaa tgactgcacc atcccaggta ttaaagatcc gccgcccaga
    22141 cgactggcac cttcacctcc gcgatggcga catgttaaaa actgtcgtgc cgtataccag
    22201 cgaaatttat ggacgggcta ttgtaatgcc caatctggct ccgcccgtga ccactgttga
    22261 ggctgccgtg gcgtatcgcc agcgtattct tgatgccgta cctgccgggc acaatttcac
    22321 cccattgatg acctgttatt taacagattc gctggatcct aatgagctgg agcgcggatt
    22381 taacgaaggc gtgttcaccg ctgcaaaact ttatccggca aacgcaacca ctaactccag
    22441 ccacggcgtg acgtcaattg acgcaatcat gccggtactt gagcgcatgg aaaaaatcgg
    22501 tatgccgcta ctggtgcatg gtgaagtgac acatgcagat atcgacattt ttgatcgtga
    22561 agcgcacttt atagaaagcg tgatggaacc tctgcgccag cgcctgactg cgctgaaagt
    22621 cgtttttgag cacatcacca ccaaagatgc tgccgactat gtccgtgacg gaaatgaacg
    22681 gctggctgcc accatcactc cgcagcatct gatgtttaac cgcaaccata tgctggttgg
    22741 tggcgtgcgt ccgcacctgt attgtttacc catcctcaaa cgcaatattc accaacaggc
    22801 attgcgtgaa ctggtcgcca gcggttttaa tcgagtattc ctcggtacgg attctgcgcc
    22861 acatgcacgt catcgcaaag agagcagttg cggctgcgcg ggctgcttca acgccccaac
    22921 cgcgctgggc agttacgcta ccgtctttga agagatgaat gctctgcagc actttgaagc
    22981 attctgttct gtaaacggcc cgcagttcta tggcttgccg gtcaacgaca cattcatcga
    23041 actggtacgt gaagagcaac aggttgctga aagcatcgca ctgactgatg acaccctggt
    23101 gccattcctc gccggggaaa cggtacgctg gtccgttaaa caataaaaat cgtagcttcc
    23161 tgttgtcatt aggttatttt acctgtataa ataaccagta tattcaacag ggggctatta
    23221 tgcgaattga agtcaccata gcgaaaactt ctccattgcc agctggggct attgacgccc
    23281 tggctggcga actttcccgc cgtattcagt atgcgtttcc tgataatgaa ggccacgtat
    23341 cggtacgtta tgccgcagcg aataatttat cggttattgg cgtaacaaaa gaagataaac
    23401 agcgcattag cgaaattctc caggaaacgt gggaaagcgc cgatgactgg tttgtcagcg
    23461 aataatatgc agtgattttt gtttttgccg ggtcgccccg gcttttttat tttacttaca
    23521 aattttgagt acaaaatttc tacacttcct caaaataatt gcacaatatg ctaaaaaaat
    23581 atgaatgaca tgctgtttta ttgttcatat aaatcttaaa agcagaaatt tatctgttcc
    23641 cccctttaaa aattcggtga atacccttac ttattggtat actgaagttg cttcagataa
    23701 aaacgcattg aacctcgaat aacgttgtct agtaacacga attagggggc catgatggaa
    23761 aaaaataatg aagtcattca gactcatccg ctcgtagggt gggacatcag caccgttgat
    23821 agctatgatg cgctgatgtt gcgtttgcac taccagaccc caaataagtc cgagcaggaa
    23881 gggactgaag ttggtcagac gctctggtta accactgatg ttgccagaca atttatttcg
    23941 atattagaag caggaatcgc caaaattgaa tccggtgatt tcccggtaaa cgagtatcgg
    24001 cgtcattaac atgacatgac catccaccca aaaggcacct caccggtgcc tttaccattt
    24061 ctgggttgta tatctgcatt cagttaatta ctctgcttaa accatgagag cagagagaaa
    24121 aaaatgaaat acgatctcat cattattggc agcggttccg taggcgctgc cgccgggtat
    24181 tatgcaaccc gcgccggttt aaacgtgcta atgaccgacg cccatatgcc accgcatcaa
    24241 cacggcagcc accacggcga tacgcgatta attcgccatg cttatggtga aggcgaaaag
    24301 tatgtcccgt tggtcctccg cgcgcaaacg ctgtgggatg aactttcccg ccacaacgaa
    24361 gatgatccca tttttgtacg ctctggtgtc attaacctcg gcccggctga ctccgcattt
    24421 ctcgccaacg tcgcccacag cgccgaacag tggcaactca acgttgaaaa gctcgatgcg
    24481 caagggatta tggcccgctg gccagaaata cgcgtcccgg acaactacat cggcttattt
    24541 gagactgatt ccggtttttt gcgcagcgaa ctggcgatta aaacctggat ccaactggcg
    24601 aaggaagcgg gctgtgcgca actgttcaac tgcccggtca ccgcaattcg tcatgacgat
    24661 gatggcgtaa ctattgaaac cgttgacggt gagtatcagg cgaaaaaagc gattgtctgc
    24721 acgggaacat gggtaaaaga cctgctcccg gagctgcctg tccagcctgt acgtaaagta
    24781 tttgcctggt atcaggccga tggccgctat agcgtgaaga ataaattccc ggcgtttacc
    24841 ggtgaactgc ccaatggcga tcaatattat ggttttccgg cagaaaacga cgcgttgaag
    24901 attggcaaac ataacggagg ccaggttatc cattcagcgg atgaacgtgt tccgtttgcg
    24961 gaagtggtca gcgatggttc ggaagccttc ccgttcttgc gcaatgtatt gccgggtatc
    25021 ggttgctgcc tgtacggcgc tgcctgcacc tatgataatt cgcctgacga agattttatt
    25081 atcgataccc tacccggcca cgataataca ctgctcatta ccggcctgag tgggcacggt
    25141 tttaaatttg cgtcagtttt aggggaaata gctgccgatt ttgcgcaaga caaaaaaagc
    25201 gattttgatt tgacgccatt caggctttcc cgcttccaat aatcatcatt acggcctcca
    25261 gaatgaggcc gtttttacag gagtatttaa tgcgtcggct gttgcactat ctcatcaata
    25321 atattcgcga gcatctgatg ctttatcttt ttctctgggg attgttggca attatggatc
    25381 tgatctatgt gttttatttt tagttttccg cactgacata aactgacaaa tatttaatct
    25441 ccctttcatt tagcgtgaaa aattgaatga aattattcct gcttctacag cactcaccag
    25501 acatctctga tgctgaaccc actaaactta tgaagattct ttcattatta attcaaaatt
    25561 attgaaataa aaataaatat cattcaattt gttatttttg tgttgcaatt cattctccga
    25621 cacgccattt tctttctctc gcaaattcgt attggatgca cttatgtcat tcacaaatac
    25681 ccctgaacgc tatggtgtta tatctgcggc cttccattgg ctaagcgcaa ttattgtcta
    25741 cggcatgttt actttaggtc tgtggatggt cacgctcagt tattacgatg gctggtatca
    25801 caaagcaccc gaactgcata aaagcatcgg tattttgtta atgatggggc tggttattcg
    25861 cgttctgtgg cgtgtcatat ctccaccgcc gggtccgctg ccgagttatt cgcccatgac
    25921 tcgtcttgcc gcaaaggctg gacatctcgc attgtaccta ttgctgttcg ccatcggcat
    25981 cagcggctat ctgatctcaa ctgccgatgg taaaccgatc agcgtttttg gctggtttga
    26041 cgtccccgcg acccttgccg acgctggcgc acaggcagac tttgccggtg ccctgcattt
    26101 ttggctcgcg tggagcgtcg tagtactgtc cgttatgcac ggatttatgg ccctgaagca
    26161 tcatttcatc gataaagacg acactctgaa gcgcatgctg ggaaagtcgt catctgacta
    26221 tggagtataa aaaatgaaaa aaagcctgct tggtttaacc ttcgcgtccc tgatgttctc
    26281 tgccggttca gcggttgccg ccgattacaa aattgacaaa gaaggtcagc acgcctttgt
    26341 taatttccgc atccagcacc ttggctatag ctggttatac ggcaccttta aagatttcga
    26401 cggtactttt acctttgacg aaaaaaatcc ggctgccgat aaagtgaatg tgacaattaa
    26461 caccaccagc gtcgatacta atcacgccga acgcgataaa catcttcgca gtgcagattt
    26521 cctcaatacc gcaaaatatc cacaggcaac attcacctcc accagcgtga agaaagacgg
    26581 tgacgaactg gatattaccg gcgatctgac gctgaatggc gtaaccaaac ccgtcacgct
    26641 ggaagcgaaa ttaattggtc agggcaacga cccatggggt ggtaaacgtg caggcttcga
    26701 ggccgaaggc aaaattaagc tcaaggactt caatatcaag acagatttag gtccagcttc
    26761 tcaggaagtg gatctgatta tttcagtgga aggcgtacag cagaagtaag cgtgaaatgt
    26821 tgccggatgg cacgcatccg gcaatgatat ttattctgtt ggatcaggaa tgcccagtgt
    26881 tgtattcaga cgtccacgag acttattaaa gatcttattg ccattttcac gtcctgcccg
    26941 acggcgtcgc tgttcttctg gcggtaacgc gctttcttcg cagcaaatct cactacaaca
    27001 acctttgtat ttttccgcgc atactggaca ctgaataaac agcaggtggc agccatcatt
    27061 tttacagttg gtatggctgt cgcacggcgc gccgcactgg tggcaatgcg cgataatctc
    27121 atccgatata cgttcgccca tccgctcgtc aaaaacaaaa tttttgccaa taaaacgcac
    27181 cggcaagccc tgctcgcgcg ccttacgggc gtattcaata attccgccct cgatatgcca
    27241 gactttgttg aatccgttat gtttcatcca agcactggcc ttttcacaac gaatgccgcc
    27301 ggtgcagtac atgacgattt ttttatcttt atgtgcctgc atcatctcga ctgcttttgg
    27361 cagctgctca cggaaggtat ctgccggaat ttcgagcgcg ttttcaaagt gccccacttc
    27421 atactcatag tggttac
//
LOCUS       DADKRT010000037        27203 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.037, whole genome shotgun sequence.
ACCESSION   DADKRT010000037 DADKRT010000000
VERSION     DADKRT010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27203
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.037"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(37..1335)
                     /gene="eno"
                     /locus_tag="JQ356_001335"
     CDS             complement(37..1335)
                     /gene="eno"
                     /locus_tag="JQ356_001335"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HAY4621481.1"
                     /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
                     KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(1423..3060)
                     /gene="pyrG"
                     /locus_tag="JQ356_001336"
     CDS             complement(1423..3060)
                     /gene="pyrG"
                     /locus_tag="JQ356_001336"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HAY4621482.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
                     AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
                     TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
                     VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
                     DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
     gene            complement(3288..4079)
                     /gene="mazG"
                     /locus_tag="JQ356_001337"
     CDS             complement(3288..4079)
                     /gene="mazG"
                     /locus_tag="JQ356_001337"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HAY4621483.1"
                     /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
                     DAITREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
                     SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
                     TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
                     ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
     gene            complement(4150..4485)
                     /gene="mazF"
                     /locus_tag="JQ356_001338"
     CDS             complement(4150..4485)
                     /gene="mazF"
                     /locus_tag="JQ356_001338"
                     /EC_number="3.1.27.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease MazF"
                     /protein_id="HAY4621484.1"
                     /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
                     MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKRIAWRARGATKKGTVAPEELQLI
                     KAKINVLIG"
     gene            complement(4485..4733)
                     /gene="mazE"
                     /locus_tag="JQ356_001339"
     CDS             complement(4485..4733)
                     /gene="mazE"
                     /locus_tag="JQ356_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HAY4621485.1"
                     /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
                     EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
     gene            complement(4811..7045)
                     /locus_tag="JQ356_001340"
     CDS             complement(4811..7045)
                     /locus_tag="JQ356_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HAY4621486.1"
                     /translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ
                     QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
                     ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGS"
     gene            complement(7093..8394)
                     /gene="rlmD"
                     /locus_tag="JQ356_001341"
     CDS             complement(7093..8394)
                     /gene="rlmD"
                     /locus_tag="JQ356_001341"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HAY4621487.1"
                     /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL
                     LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
                     SKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
                     QCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK
                     LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
                     SALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ
                     NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
                     TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
     gene            8451..11207
                     /gene="barA"
                     /locus_tag="JQ356_001342"
     CDS             8451..11207
                     /gene="barA"
                     /locus_tag="JQ356_001342"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HAY4621488.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
                     LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
                     NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
                     PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
                     KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
                     IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
                     VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL
                     VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
                     KILG"
     gene            complement(11439..12779)
                     /gene="gudD"
                     /locus_tag="JQ356_001343"
     CDS             complement(11439..12779)
                     /gene="gudD"
                     /locus_tag="JQ356_001343"
                     /EC_number="4.2.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HAY4621489.1"
                     /translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIMIIK
                     DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ
                     TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKAT
                     PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
                     SIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
                     EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
                     TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
                     PEKPGLGVEIDMDQVMKAHELYQKHGLCARDNAMGMQYLIPGWTFDNKRPCMVR"
     gene            complement(12800..14140)
                     /locus_tag="JQ356_001344"
     CDS             complement(12800..14140)
                     /locus_tag="JQ356_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HAY4621490.1"
                     /translation="MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
                     NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
                     WTFELHVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
                     LPYLENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
                     VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE
                     FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
                     WGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVP
                     DAPGLGVELDWEQVQKAHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
     gene            complement(14142..15512)
                     /locus_tag="JQ356_001345"
     CDS             complement(14142..15512)
                     /locus_tag="JQ356_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4621491.1"
                     /translation="MFRSATTSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRAT
                     LSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWS
                     MFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSI
                     FNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQ
                     KELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYF
                     FITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKT
                     PIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSG
                     GLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIEL
                     KPVAGQ"
     gene            complement(15929..16378)
                     /locus_tag="JQ356_001346"
     CDS             complement(15929..16378)
                     /locus_tag="JQ356_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HAY4621492.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
                     LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
                     GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS"
     gene            complement(16396..17178)
                     /gene="truC"
                     /locus_tag="JQ356_001347"
     CDS             complement(16396..17178)
                     /gene="truC"
                     /locus_tag="JQ356_001347"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HAY4621493.1"
                     /translation="MLEILYQDEWLVSVNKPSGWLVHRSWLDRDEKVVVMQTVRNQIG
                     QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
                     PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
                     IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
     gene            complement(17178..17507)
                     /locus_tag="JQ356_001348"
     CDS             complement(17178..17507)
                     /locus_tag="JQ356_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HAY4621494.1"
                     /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
                     MEPLEWLQWVLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQHALILAELEKLDA
                     LFADDAS"
     gene            complement(18129..18674)
                     /gene="syd"
                     /locus_tag="JQ356_001349"
     CDS             complement(18129..18674)
                     /gene="syd"
                     /locus_tag="JQ356_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HAY4621495.1"
                     /translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
                     TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
                     TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
                     RKRTHLASNLAEFLNQLKPLL"
     gene            18742..19590
                     /gene="queF"
                     /locus_tag="JQ356_001350"
     CDS             18742..19590
                     /gene="queF"
                     /locus_tag="JQ356_001350"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HAY4621496.1"
                     /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
                     KADNLPFHGTDIWTLYELSWLNAKGLPKVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
                     EFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
                     TRLVRQ"
     gene            19702..21066
                     /gene="ppnN"
                     /locus_tag="JQ356_001351"
     CDS             19702..21066
                     /gene="ppnN"
                     /locus_tag="JQ356_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HAY4621497.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
                     DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
                     LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
                     SGIVAGNVKAVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICT"
     gene            21623..22912
                     /locus_tag="JQ356_001352"
     CDS             21623..22912
                     /locus_tag="JQ356_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HAY4621498.1"
                     /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
                     DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
     gene            22970..24337
                     /gene="sdaB"
                     /locus_tag="JQ356_001353"
     CDS             22970..24337
                     /gene="sdaB"
                     /locus_tag="JQ356_001353"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HAY4621499.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
                     HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
                     DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
                     GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVACD"
     gene            24359..25204
                     /gene="xni"
                     /locus_tag="JQ356_001354"
     CDS             24359..25204
                     /gene="xni"
                     /locus_tag="JQ356_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311685.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HAY4621500.1"
                     /translation="MRGLFPISHPAVACSGIECYPYRLIFKGVIVAVHLLIVDALNLI
                     RRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPP
                     MPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGY
                     CQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPK
                     SATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQ
                     LRLVR"
     gene            complement(25309..26446)
                     /gene="fucO"
                     /locus_tag="JQ356_001355"
                     /pseudo
     CDS             complement(25309..26446)
                     /gene="fucO"
                     /locus_tag="JQ356_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417279.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
     gene            complement(26474..27121)
                     /gene="fucA"
                     /locus_tag="JQ356_001356"
     CDS             complement(26474..27121)
                     /gene="fucA"
                     /locus_tag="JQ356_001356"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HAY4621501.1"
                     /translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
                     IPYEKLTESHIAFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
                     ILNRPIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIAC
                     EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
BASE COUNT         6578 a         7294 c         6555 g         6776 t
ORIGIN      
        1 cggaggctgg catttttaaa tcagataaag tcagtcttat gcctggcctt tgatctcttt
       61 acgaccgttg tacggtgctt tttcgcccag agcttcttcg atacgaatca gctggttgta
      121 tttagcaaca cggtcagaac ggctcataga accagttttg atctggcctg cagcagtacc
      181 aacagccagg tcagcgatgg tagcgtcttc agtttcgcca gaacggtgag agataactgc
      241 agtgtagcca gcatctttcg ccatcttgat tgcagccaga gtttcggtca gagaaccgat
      301 ctggttgaat ttgatcagga tggagttagc gatacctttt tcgatacctt ctttcaggat
      361 cttggtgttg gttacgaaca ggtcgtcacc aaccagctgg attttgtcgc ccagaacttt
      421 ggtctggtat gcgaaaccgt cccagtcaga ttcgtccaga ccgtcttcga tagaaacgat
      481 cgggtactgt ttggtcagtt cttccaggaa gtgagtgaat tcttcagagg tgaacgcttt
      541 gttgccttcg ccagccagaa cgtatttacc atctttgtag aattcagaag ctgcgcagtc
      601 catcgccaga gtgatgtctt tgcccagttc ataaccagca gctttaacag cttcagcgat
      661 aacagccaga gcttcagcgt tggaacccag gttcggcgca tagccacctt cgtcaccaac
      721 agcagtgttc atgcctttcg ctttcagaac ttttgccagg tgatggaaaa cttcagaacc
      781 catgcggatg gcttctttca cagttttcgc gccaaccggc tgaatcatga attcctggat
      841 atcaacgttg ttgtcagcgt gctcaccacc gttgatgatg ttcatcatcg gaaccggcat
      901 agagtatttg cccggagtac cgttcagttc agcgatgtgc tcgtacagcg gcataccttt
      961 agcagctgca gcagctttgg cgttagccag agatacagcc aggattgcgt tcgcgccgaa
     1021 tttggatttg ttttcggtgc cgtccaggtc gatcatgatc ttgtcaatgc cagcctgatc
     1081 tttagcatct ttgccaatca gcgcctgagc gatcgggccg tttaccgcag caacagcttt
     1141 ggttacgcct ttacccagga aacgggattt gtcgccatcg cgcagttcca gagcttcacg
     1201 ggaaccagta gaagcacctg acggagcagc tgccataccg acgaaaccac cctccagatg
     1261 tacttcggct tcaacagtcg ggttaccacg ggagtcgatg atttcacgac cgatgatttt
     1321 tacgattttg gacattaggt tttcctcaag tcactagtta aactgaaact ccagacaaac
     1381 aacacgtacc cagggtacgc gttgccgttc taactttttt acttacttcg cctgacgttt
     1441 ctggaactcg ctggcggctt tcacaaagcc tgcaaacagc gggtgaccat cacgtggagt
     1501 agaagtaaac tccggatgga actggcaagc cacgaaccac gggtgattcg gaacttcgat
     1561 gatctcgacc aactgatcat ccccggaacg gcccgcaacg cgcagacctg catcttcaat
     1621 ctgtttcaac agcatgttgt tgacttcgta acggtgacga tgacgctcaa caattgtcgg
     1681 cgcattgtac agctggcgaa ccaggctatc gtcaaccaac tggcactgct gtgcgccgag
     1741 acgcatggta ccgccgagat cgctcttctc gctacgaact tcaacgttgc cgttttcatc
     1801 gcgccactcg gtaatcagcg ccacaaccgg gtacttacag tctggcacaa attccgtaga
     1861 gttggcgttc tccatgttgg caacatggcg agcgtaatca attaacgcca cctgcatacc
     1921 caggcaaatg cccagataag gaatattgtt ctcacgcgca aaacgcgcgg tcgtaatcat
     1981 gccttctacg ccacgatagc cgaaaccgcc aggtacgagg attgcgtcca gacctttaag
     2041 gatttcaacg ccgcgcgttt caacatcttg tgaatcgatc agtttgatgt tgacgctgac
     2101 acgattcttc agcccaccgt gtttcagtgc ttcgatcact gatttataag catccggcag
     2161 ttcaatgtac ttgccgacca taccgatggt gacttcactt accgggttcg cttcttcgaa
     2221 gataacctgt tcccattcgg acagattcgc ttccgggcag tttaagctga atcgtttaca
     2281 aatataatcg tccagcccct gagatttcaa caggcccgga attttataga tggaatcgac
     2341 gtctttcaga gaaataaccg ctttttccgg aacattacag aacaatgcaa tcttcgcacg
     2401 ttcgttcgcc ggaacagcgc gatctgaacg acaaatcagg atgtcaggct ggataccgat
     2461 ggagagcagc tcttttacag agtgctgagt cggtttggtt ttgacttcac cagacgctgc
     2521 catgtacggc accagcgtca ggtgcataaa cagagtgtgc tcacggccaa tttcaacagc
     2581 catctggcga atcgcttcga ggaacggcaa ggattcgata tcacctactg taccgccgat
     2641 ttctaccagt actacgtcat gaccttcgcc accttccagc acgcgctctt tgattgcgtt
     2701 agtgatgtgc ggaataacct gcacggttgc gccgaggtag tcaccgcggc gttctttacg
     2761 cagaacgtca gagtagatac gacccgtggt gaagttgttg cggcggctca ttttggtacg
     2821 aatgaaacgc tcgtagtgcc ccaggtccag gtcggtttca gcgccgtctt cagtaacgaa
     2881 cacttccccg tgttggattg ggctcatagt acctggatcg acgttgatgt acggatccag
     2941 tttcatgatg gtcacattga ggccacgggc ttcaagaatg gctgcgaggg aggctgcggc
     3001 aatgccttta cccagagagg atacgacccc gccggtcaca aaaatatagt tcgttgtcat
     3061 gctgaacctg agaagttagg ttgaaaagac gatggaataa ccaggacggg aaagcagtat
     3121 acccgaacat gacctgtgcc acaaactttc attatccctc ctcttcgcca gcgcactatt
     3181 gaaatcagga gtgagaaaat agcccctttg gggtaaatgt ttttgacgca aatcaagcgc
     3241 ttgtcattta aaaaatgaca caaatggcac ttgaccgcgt aattccctta gagatcaatt
     3301 tcctgccgtt ttacctgttg ccagacttct tccattgttt cgaggtcaac acctgtcatt
     3361 tccagtccac gcgcggcaac aatacgctcc acttcgcgaa aacgacgctc gaatttttcg
     3421 ttcgcttttt gcaatgcgat ttctgctttc gtccctaaat ggcgagccag attaaccgtg
     3481 gcaaacagca ggtcccccat ttcctcctcc agtttagcct ggtcgacaac agcctgccgc
     3541 gcttcgtaca tcacctcgtc gatctcttcg tagactttat caaccaccgg gccaagcgtc
     3601 gtccagtcga agccaacgtt ggcgcaacgt ttctggattt tttgcgcccg cattaaagcc
     3661 ggtaaactac gaggaatatc gtccagcgcc gaatgctgcg ctttctgcgc gcgctcttcg
     3721 gttttgattt gctcccaacg ggcaagcact tcactactgt tttcggcaga actatcagca
     3781 aaaacatgcg gatggcgacg ctctaattta tcgctaatag cagcgcaaat atcattaaag
     3841 tcaaagcgcc cttcttcctg agccatttgc gcgtaaaaca ccacctggaa tagcagatcg
     3901 cccagttcac cgcgaagatc gtcaaaatct tcacgggtga tggcgtccag cacttcgtag
     3961 gtttcttcaa gggtgtaagg cgcaatggtg gcaaatgtct gctctttatc ccacgggcag
     4021 ccgttttccg gatcgcgcag gcgctgcata atagtgagca aacgatcgat ttgattcatt
     4081 gaattgtcct gaaaattgcg ggtctgtcag gtggaaacct gtgaccagaa tagaagtgag
     4141 ttagtaacac tacccaatca gtacgttaat tttggcttta atgagttgta attcctctgg
     4201 ggcaactgtt cctttcttcg ttgctcctct tgcccgccag gcgattcttt ttacctgatc
     4261 agctaacgct acgccatcac gttcctgacc ggataaaaca acttcgaacg gatatccttt
     4321 tgattgcgtt gtacaaggaa cacacagaca catacctgtt ttgttgttgt acatgaaagg
     4381 actcaggaca acagctggac gatgtccagc ttgctcgcta ccttttgtcg ggtcaaaatc
     4441 aacccaaatc agatcgccca tatcgggtac gtatcggctt accattacca gacttcctta
     4501 tctttcggct ctccccagtc gatattctcg tggaggtttt ccggcgtgat gtcgttgacc
     4561 agttcagcaa gcgtaaatac gggctcttta cgcactggct caataattaa tttgccatcc
     4621 accaggtcaa tcttcacttc atcatcaata ttcagattga gcgcctgcat taacgtagcc
     4681 gggatccgca ccgccggtga atttccccaa cgctttacgc tactgtggat catcaccctt
     4741 tcctcaaacc gctatcatat gtagatacag tatatatcaa tctacattgt agatacgagc
     4801 aaatttctgc ctaactcccg tgcaaccgac gcgcgtcgat aacatccggc acctggttga
     4861 gtttacccag cacgcggccc agcacctgca ggttgtaaat ctcaatggtc atgtcgatgg
     4921 tcgccagttg ctgtttggtg tcgctacggc tggcaacgcc aagtacgttc accttctcgt
     4981 tggcgagaat ggtcgtgata tcacgtaaca acccactacg atcattagcc accacgcgga
     5041 ccaccagcga atatccggcg gagtagctct caccccatac cgcgtcaaca atgcgttctg
     5101 gcgcatgaga gcgcagttcc gccagttgtt cgcaatcggc gcggtgtact gaaataccgc
     5161 gcccctgggt aatgaagccg acaatctcat ctccaggaat cggctggcag cagcgcgcga
     5221 tgtggtgcat caggttgcca acaccttcga ctaccacgcg accgttatct ttactgcggt
     5281 tttgcggcgt gtagcttttt tgctgaagtt gcttcagcgc ggcggcgtcc tgctcttcgg
     5341 cactcggctt attaaattgc gattgcagga agttcaccat ctgattgaga cggatatccc
     5401 cgccaccaat cgccgccagc aactcgtcga catcattaaa gttgtaacgc ggcagcagat
     5461 gtttttctgc ttctttcagg ctgatcccca gatgttccag ctcgtcgtca aggatttgcc
     5521 gcccagccag aatgtttttg tcacggtcct gtttacggaa ccaggcgtga attttcgaac
     5581 gcccacggct ggttgtgacg taaccgaggt ttgggtttaa ccagtcacgg ctggggttcg
     5641 gctgtttctg ggtgataatt tcaatctggt cgcccatctg cagctggtag gtgaacggca
     5701 caatgcgccc gccaattttt gccccgatgc agcggtgtcc gacatcactg tggatgtggt
     5761 aagcgaagtc cagcggcgtt gatcccgcag gcaaatcaac gacatcacct ttcggcgtaa
     5821 agacatacac ccggtcgtca aagacctggc tgcgtacttc gtcgagcatt tcgccggaat
     5881 cagccatctc ttcctgccac gcaatcagtt tacgcagcca ggcaatccgg tcttcatgtc
     5941 ccgaacgtgc gccgccagct gccgcgccct ctttatattt ccagtgcgca gcaacaccca
     6001 actctgcatc ttcatgcatc tgtttggtgc ggatttggat ctcaacggtt ttgccacctg
     6061 gccccagaac cacggtatga atagactgat aaccgtttgg tttcgggtta gcgacataat
     6121 cgtcaaactc atccggcagg tggcgatagt gagtgtgcac tatccccagt gcggcataac
     6181 aatcctgtaa acgctcggcg acaatacgta ccgcacgcac atcaaacagc tcatcgaagg
     6241 cgaggttctt tttctgcatt ttgcgccaga tgctgtagat gtgtttcgga cggccataca
     6301 cttcagcttt aacgccttca gctttcatct cagcgcgcag atgaccgaca aactcttcga
     6361 tatagtgttc gcggtcgaga cggcgttcat gcagcagttt tgcgatgcgt ttgtattcgg
     6421 tcgggtgcag ataacggaag cagtaatctt ccagctccca tttcagttgc ccaatcccaa
     6481 gacggttcgc caacggcgcg tagatattgg tgcactcttt tgccgccagt acgcgttcat
     6541 cttccggcgc atcttttact tcgcgcagat gagcaatacg ctccgccagt ttgatgacca
     6601 cgcagcgaaa atcatcgacc atcgccaata acatccggcg aacgttatcg acctgttcgg
     6661 aggaaacaga atcagtgtgc gtcgctttca gctggcggat cgccgccata tcacgcacgc
     6721 cgtgaataag gttaacgaca gacttaccga cgctctcacg cagcacatct tcgctgacta
     6781 cgttggcatc ggccagaggg aacagcagcg ccgcccgcag cgtgtcaatg tccatactta
     6841 atgtcgagag gatctccacc atctcaacac cacgccacaa taacagactg gcatccggat
     6901 gcccctgcgt ctgctgcaga caatacgccc aggtttcggc taagcactca cacgacttct
     6961 ggctggtaat acccagactt gcgatccatt tttccggatc aaattcacca gccttattga
     7021 tatgtgcact tcttaccgca accattgtcc tctcctttag ggaccagacc tgccgaaatc
     7081 ggcaaatcgt aactatttaa cgcgcgagaa aagtaccatc gattccagat gtcccgtgtg
     7141 tgggaacata tccagcatcg ccagtcgcgc aatggtatat cctgctttta ataacgcttc
     7201 gctatcccga gccagcgttg cagggttaca ggatacataa actatacgaa taggttccag
     7261 ttttataatt tgctgcataa cacctgcggc acctgctcgc gccgggtcca gcaacacttt
     7321 atcgaagccg tttttcgccc acggctgctt tgtgacatct tcttcaagat tttcgtgata
     7381 aaacgtcaca ttctgtaagc cattaagacg cgcattctgc tggccttttt ccaccagcgc
     7441 cggaacacct tctacaccga ccacactggc agcttgtgtc gccaatggca gtgtaaagtt
     7501 gcccataccg cagaacagat ccagtacgcg atcttcaggt tgcacatcca gccattccaa
     7561 cgcactcgct accatttttt ggttcacacc cgcattgacc tgaataaaat cgcgcgggct
     7621 aaaagttaag cgcaacccgt tagagtcata ccagggcatc tcaccagaga cggtttcgag
     7681 tatctcacta tcgggggcga gatacagatc caggccttca gaatgcgaaa agcgttccag
     7741 tttttcgcga tctgccgaac ttagcggtgc ggtatggcgc aaaatcatca gcgtgccgct
     7801 ggttgcctgt accagttcaa catgaccaag atggcgcatt gcttgtaagc tgcccaggca
     7861 tgccctgact ttgggcagca atgcttcaag ttggggcact aaaatgggac attgtttaac
     7921 gtcgacaatg tcactggagc ccgctttgcg aaaccccatc tgaagttgct gtgttttcgg
     7981 taagtagttc agacttaaac gcgcgcgacg gcgatagccc cagggaacat cggcgatcac
     8041 ttcagagact tcgtgtttca ttaatcgggc gagtgccgca cttttgcttc gctgctgtaa
     8101 atccacgctg gcgtgttgtt gctgacagcc gccgcatacg ccaaaatgag gacagcgtgg
     8161 cgtttcgcgt tccgggctat cgcttaaccg gcgtacgact ttagcgcggg catactgttt
     8221 tttatcttca gtaacagtaa cttccgcgtt ttcctgcggc aataatccgg ggataaatag
     8281 cgttttgccg ttatgtcgcg ccacgccctg accaaaagag tcgaggtcgt tgactgaaac
     8341 ggttatgatc tgacgcgtcg tcgtgcgtcg ttttgcagag tagaattgcg ccattggcga
     8401 gactttctca atttaacagt gtgaccttaa ttgtcccata acggaactcc atgaccaact
     8461 acagcctgcg cgcacgcatg atgattctga tcctggcacc gaccgtcctt attggtttat
     8521 tgctgagtat atttttcgtc gtgcatcgct ataacgactt gcagcgtcaa ctggaagatg
     8581 caggtgccag cattattgag ccgcttgcag tttctactga atatggcatg agcctgcaaa
     8641 atcgcgaatc tatcggtcag ttaataagcg tactgcatcg tcgccattcc gatattgttc
     8701 gcgcgatttc ggtttatgat gaaaataacc gactctttgt cacctccaat tttcatcttg
     8761 atccctcatc aatgcagctc ggcagcaacg tgccgtttcc tcgccagctc actgtcactc
     8821 gtgacggcga tattatgatc ctccgcacgc cgattatttc tgagagttac tcccccgacg
     8881 aatcgcccag tagcgatgcc aaaaatagtc aaaatatgtt gggatatatt gcgcttgagc
     8941 tggatcttaa atcggttcgc ttgcagcaat ataaagagat ctttatttcc agcgtgatga
     9001 tgctgttttg tatcggtatt gcgcttattt ttggctggcg cttaatgcgc gatgtaaccg
     9061 gtccgattcg caacatggtg aataccgtcg accgcatccg tcgcgggcaa ctcgacagcc
     9121 gggtggaagg atttatgctc ggcgagctgg atatgctgaa aaacggtatc aactcgatgg
     9181 caatgtcgct ggctgcttat cacgaagaga tgcagcacaa tatcgaccag gcgacgtccg
     9241 atctgcgtga aacgctggag cagatggaaa ttcagaacgt tgagttggat ctggcgaaaa
     9301 agcgcgccca ggaagcggcg cgtattaaat ccgagtttct ggcaaatatg tcacacgagc
     9361 tgcgtacacc actgaatggt gttattggct ttacccgcct gacgctgaaa acagaattaa
     9421 caccaacgca gcgcgatcac ctgaatacga ttgaacgttc ggcaaataat ttgctggcaa
     9481 ttattaatga tgttctcgac ttctcgaaac tggaagcagg taagctgatt ctggaaagta
     9541 ttccattccc actacgcagc acgctggatg aagtcgttac tctgctggca cattcttctc
     9601 acgataaagg gttggaactg acgctcaata ttaaaagcga cgtgcctgat aacgtgatcg
     9661 gcgacccact gcgattacag caaatcatca ctaacctggt ggggaatgca attaaattca
     9721 ccgagaatgg caacattgat attctggtag aaaaacgtgc gctgagtaat accaaagtgc
     9781 agattgaagt gcagattcgg gataccggca ttggtattcc tgaacgcgat caatcgcgct
     9841 tattccaggc cttccgacag gctgatgcca gtatttcccg ccgtcatggt ggcaccgggc
     9901 tggggctggt gattacacaa aaactggtta atgaaatggg cggcgatatt tcgttccata
     9961 gccagccgaa tcgcggttca actttctggt tccacattaa tctcgatctg aacccgaaca
    10021 ttattatcga agggccatcc acccagtgcc tcgcaggtaa gcgcctggcc tatgtcgaac
    10081 caaactccgc agcagcgcaa tgcacgctgg atattttaag tgaaacgccg ctggaagtgg
    10141 tttatagccc aacgttctcc gcgctgcctc ccgcgcatta cgacatgatg ttgttaggca
    10201 tcgcggtgac cttccgcgag ccgctaacaa tgcaacatga gcgattagcg aaagcggtat
    10261 cgatgaccga tttcctgatg ctggcacttc cttgccatgc acaagtcaat gctgaaaaac
    10321 tcaagcaaga tggtatcggc gcgtgtctgc tgaaaccatt aacacctaca cgcctgttgc
    10381 ctgccctgac ggaattttgt catcacaaac aaaacacgct tttgcctgta accgatgaaa
    10441 gtaagctggc aatgacagtc atggcggttg atgacaaccc cgctaacctg aaacttatcg
    10501 gcgcattgct ggaagatatg gtgcaacatg tggaactttg cgatagcggg catcaggcgg
    10561 ttgaacgggc gaaacagatg ccgttcgatt tgatcttaat ggatattcaa atgccggaca
    10621 tggatggcat tcgggcctgc gaactcatcc accagctccc ccatcagcaa caaacgccgg
    10681 ttatcgcggt aacggcgcat gcaatggccg ggcaaaaaga gaagctgctt ggcgcaggga
    10741 tgagcgatta tctggcgaaa ccgattgaag aagagcgatt gcataatttg ttgttgcgct
    10801 acaagcctgg cagcggtatt tcctctcgcg tcgtgacgcc cgaagtcaac gaaattgtgg
    10861 tgaacccgaa tgcgaccctc gactggcaac tggcactacg ccaggcagca ggaaaaaccg
    10921 atttagcgcg cgatatgctg caaatgttac tcgatttcct gcctgaagtt cgcaacaaag
    10981 ttgaggaaca gctggttgga gaaaacccgg aaggcctggt tgatttgatt cataaactgc
    11041 atggcagttg cggctatagc ggtgtgccgc gtatgaagaa tctctgccaa ctgatcgaac
    11101 aacagctacg tagcggtact aaagaagaag atttggagcc ggagctgctg gaactgttgg
    11161 acgagatgga taatgtcgcg cgcgaagcca gcaaaattct cgggtaacgg acgtcttgtc
    11221 gagtagcaat cggcttttta tgacgctggt ttcagattgg tgacaaagtg cctgtgttta
    11281 tgccggatgc ggcgttaacg ccttatccgg cctacaaaac caattaaatt caatgaatta
    11341 aaaaatgatg tagacctgat acatagcaca acaggctatt ttgcgtttag catcagtctc
    11401 aagccggctc cagatagagc cggttttggt tttctgtctt aacgcaccat gcacgggcgc
    11461 ttgttatcga acgtccagcc aggaatcaga tactgcattc ccatcgcatt gtcacgcgcg
    11521 caaagcccgt gtttctgata cagctcatgg gctttcatca cttgatccat atcgatttct
    11581 acacccagcc ccggtttttc cggcacctga accagaccgc ctttgatctc aaacggttct
    11641 ttggtcaagc gctgattgcc ttcctgccaa atccagtgcg tatcaatcgc ggtgatttta
    11701 cccggtgcag cggcggcaac atgggtaaac atcgccaggg aaatatcgaa gtggttgttt
    11761 gagtgtgaac cccaggtcag gccaaattca tggcacattt gcgccacacg taccgaacct
    11821 tgcatcgtcc agaaatgcgg atccgccagc gggatatcaa cggattgcag ggagagcgta
    11881 tggcccatct gccgccagtc ggtggcgatc atattggttg cggtcggcag gccagttgcg
    11941 cgacggaact ctgccatcac ttcacgcccg gagaaacctt gctccgcacc acacggatct
    12001 tctgcataag ccagcgaccc tttcaggtat ttaccaattt taatcgcttc gttcagcgac
    12061 caggcaccgt taggatcgag cgtaatacgc gcctgcggga agcgttgcgc cagtgccaca
    12121 atagactcgg cctcttcttc cccggccagt acaccgcctt tcagtttgaa atcgttgaag
    12181 ccatattttt catacgccgc ttccgccagg cgcaccaccg catccggcgt catcgcttct
    12241 tcatgacgca ggcgatacca gtcgcatgag tcatccggct ggctttgata cggcagcggt
    12301 gtggctttgc gatcaccgac gaagaacaga taaccgagca tttcgacttc gctacgctgt
    12361 tgaccatcgc ccagcaggga tgccacgttt acccccagat gctgccccag cagatccagc
    12421 attgccgctt ctatcccggt aactacatga atagtggtac gcaaatcaaa tgtctgcaaa
    12481 ccgcgcccac cagcatcacg atcggcaaaa gtattacgca ccagcgtcag aacgtttttg
    12541 tattcaccca gcgttttacc taccaccagc ggaatcgcat cttccagcgt tttacggatt
    12601 ttctcgccgc cgggaatttc ccctacgcca gtgtgaccag aattatcttt gataatcata
    12661 atattacgcg taaagaacgg tgcgtgtgca ccactcagat tcatcagcat actgtcatga
    12721 cccgccaccg ggatgacctg catttcagta acaacaggcg tcgtaaattg agaactcata
    12781 tttatgtcct ttttcagaat caatgacggc cgaaaacggg acgtttacgg tcaaaggtcc
    12841 agccggggat caggtactgc atcggacctg cgtcgttacg cgcaccgcca ggcagacgtt
    12901 tataggcctc atgtgccttt tgtacctgtt cccagtccag ttccacgccc agaccgggcg
    12961 catcaggaac ggcaattttt ccgtttttaa tctccagcgg atttttggtc aggcgacaat
    13021 cgccctcctg ccaaatccag tgggtatcga tagcggtagg attacccggt gccgccgcgc
    13081 ccacatgggt aaacatcgcc agagagatat cgaaatggtt attagaatgg cagccccagg
    13141 tcagccccca gtcgtcgcaa agctgcgcca cacggactgc accggaaagc gtccagaagt
    13201 gcggatcggc aagtggaata tctaccgcat tgagcatcac cgcatgaccc atttcgcgcc
    13261 agttggtggc gatcatgtta gtcgcgacgg gcaagccggt cgcccgccga aactccgcca
    13321 taacttcacg accggagaaa ccctgttctg cgccgcatgg atcttcggca taggtaagaa
    13381 catcattcag ccctttgcat agagaaatgg cttcatcaag tagccaggca ccgttgggat
    13441 caacggtaat ccgcgcatca gggaagcgtt tcttcaatgc acgaacagtg tcgatttctt
    13501 gctcgccagg taacaccccg cccttaagtt tgaaatcttt aaagccatag cgatcctgtg
    13561 aggcttccgc cagacgcaca acggcttcgc tgttcatcgc tttctgatgg cgcaactgat
    13621 accactcatg gttgcccggc gtattttcca gataaggaag atcggttttg gtccgatcac
    13681 cgatataaaa cagataaccg aggacggtaa tagtctcgcg ttgcttgcct ggccccaaca
    13741 gttcgcagac cggaacattc agcgccttac ctagcaggtc aagcaaggcg gcttccagcg
    13801 ccgccacggc attaacgtgc aattcaaaag tccaggcacc tttgccgaag gtatcaaaat
    13861 cggctgcctg attaccttta tgcacctgct gaaccacttt attcaggcgc gcaacttcct
    13921 ggcccagaac catcggaata gcatcgacca gtgtttgata aatcacctct ccgcccggcg
    13981 cttcaccaat gccggtatgc ccggcgttat cggtgagtac cacaatattg cgggtgaaat
    14041 atgcgttatg tgccccacca atattaagca acatgctatc gtgcccggcg accggaatga
    14101 ctttcatatc agtaataaca ggactggatt gtgtcgtcat cttattgccc cgcgacaggt
    14161 ttcagctcga tacgcttgat atcgcccacc agcaccaggt agctcagtac cgcgattaag
    14221 gcatgaacac caacataaat cagcgcccca ttaaaggagc cagtcgtgcc aacgatataa
    14281 ccaattgcga ttggcgtgac gatgccagaa atgttaccga acatgttgaa caggccaccg
    14341 gaaagaccgc tgatctcttt tggcgcggta tctgccatta ctgcccaacc cagcgccccg
    14401 atgcccttac cgaagaaggc cagcgccata aagccgatga tcatccactc aacgttgacg
    14461 tagttgcaga acaccatcac catcgacagc aacatgccca ttacgatcgg tgttttacgc
    14521 gcaatgttca gcgatcccgt gcggcgcatc agccagtcgg aaataatccc acccagcaca
    14581 ccgccgataa aaccgcaaac cgccggaacg gaagccacaa agcccgcttt cagaattgac
    14641 atcccacgcg cctgcaccag ataaaccgga aaccaggtaa tgaaaaagta agtcagggcg
    14701 ttgatacagt actgaccgat ataaacgccg atcatcatcc gtgacccgag cagttgtttg
    14761 atctgccccc acttcacgct gaacggcact ttaactttgg tgttttgctg atccatattg
    14821 atcagcgcgc cacccgcggc gatgtactcc agctctttct gatttacccc cggatgttga
    14881 tttggctcgt ggatgacttt caaccagata aagctgatga caatccccag accgcccata
    14941 aagaagaaga cgtgtgacca gcccacttca tgcgtcagcc agcccataat cggcgcgaag
    15001 atcaccgttg cgaagtattg agcggagtta aaaatcgaca ccgccgttcc cctttcctgc
    15061 gccggaaacc aggccgcaac aatgcgactg ttgccgggga aagatggcgc ttcagcaagc
    15121 ccgaccagga agcgcagagt aaacagggca acgataatgc cgaatccact aaagatatcg
    15181 acgaagcctt gcagcaaggt aaacatcgac cagataaaga tcgaccagaa gtagacgcgt
    15241 tttgaaccaa aacgatccag caaccaacca ccagggatct gcccgataac ataagcccat
    15301 gagaaggcag agaacacata gcccattccc acgggatcaa ggccgatatc tttggccatt
    15361 tccgaaccgg caatagaaag cgtagcgcgg tcgccgtagt tgaaggatgt gacgataaac
    15421 aacatcacca ctatccagta acgagcattc gtgcgttttt ccacactgct cgcagcctga
    15481 cttaaagaac tcgttgttgc actcctgaaa attcgcgtta gccacgctaa ctctggactg
    15541 cgacatagcc aggaaatcag aggtgacgta gggtgttttt tgccgttttt ataggtcgtt
    15601 cgccgaatac ggcgcgtgtt tatatctggc aatagcagta taaaaagcgc gccatagcgg
    15661 ctcaccgtgc aacaacacaa cattaatgcg ttcaatgagg cccgattttg gcattagccc
    15721 tggacggtgg aatccacttc acggaaatga aaacaagaac aagaaaggaa gggttaaaac
    15781 gaagaaataa agaagagtat gaaatggatc gcttgactcc aggcaaacgc cagtaaaaat
    15841 ccgcgctatg aagcagtttt tactggcatt tgcctgaaaa gattcgattc agcaccgcta
    15901 aaacgacatt taccgctcgc tgaacatatc aggacaacag cgtgccccac tgttcgaccc
    15961 acggatttga ttccgtttcc ggttccgggt tctcactggc gtcaatcaac agcatttcgc
    16021 caactcgctg agcgctctgt tcctgcaaca aggcatcgaa ctgtttgccg ccattgcaga
    16081 aatttacata actgctgtcg ccgagcgcaa tcacgccata acgcagattc ggctggaagc
    16141 ccagactatc tttgattccc tgaaagagcg gcacaatgct atcaggaagg tcgccctgcc
    16201 cggtcgtgga cgtaaccacc agaacatact tatcctgata aggcagccag tcgcttaatt
    16261 caggatcttc aaataccgtt gctttgtggc cctgtgcggt cagaattgct tctgcttctt
    16321 ccgccactaa cagcgaattt ccgtacatgg tgccgacaaa aataccaatt tccgccatac
    16381 cgttttctcc ctggattagg aacttatctc tccatcctga cccgatggcg cactgaactc
    16441 aaccctttca ttttcaggaa gcagaccgcg ccagccaaat tgtgataacg cctgcatcca
    16501 ggtgtcgtcc aggcccgcgt gaatagtcag cggctcgcca gtaaaaggat gcgtcaatga
    16561 caactgactg gcatgtagca ttaaccgctg gaggccaaaa tgctcagcac cgctgcgatt
    16621 ctggcgtaaa tcgccatgtt tgctatcgcc aataatcgga tgacgcaaat gggcaagatg
    16681 tcggcgaagc tgatgtttgc gtccggtttt cggctccagt tccaccaggc cgtagcgcgt
    16741 ggtcgggtaa cgtccggtcg ctaccggcat ttctacggtc gccagaccgc gataatgcgt
    16801 cactgctggc tgcgggcctt tatcttcgcg ggcaaattta tcagcgattt tgtccagttc
    16861 ttccaccagt ggataatcca gcaccgcttc ttccatcaac cagccgcgca caatcgcatg
    16921 gtaacgtttc tggatttggt gctgttcaaa ctgttgtgcc agcagccgtc cggcctcgct
    16981 ggataatccc atcaacaaca caccagaagt gggtcggtcc agacgatgag cagtaaaaac
    17041 atgctgtcct atctggttac gcacggtttg catgaccact actttctcgt cgcgatccag
    17101 ccagctacgg tgaaccagcc agccggaggg tttatttacc gaaaccagcc attcatcctg
    17161 atagagtatt tccagcatta gctcgcatca tccgcaaaaa gagcatccag tttttccaac
    17221 tcagccagaa taagcgcgtg ttgcggatgg tccgtcgcca gcgccatttc ataatagggt
    17281 gcaacagcaa aagcgcccgg taacggctgg ttgttattta acaaatcgtg cattcgcggg
    17341 atcagcaccc actgcaacca ctccagtggt tccatggtgt ccataaagaa cggttgggta
    17401 ctattaaatt gatgcggctg gggttcatcg tttcgccagt gctgatgttc acgcagtaac
    17461 gcttcaagcg cctgcaactg gagacgaacg cggtcatgag tggtcataaa gcaacctcaa
    17521 taagaaaaac tgccgcgaag gatagcagga ataaaaaaag ggagcactgt attcacagcg
    17581 ctcccggttc gtttcgcagc attccagcta cttttgttgc tccctgctca tccttgacaa
    17641 cttttcctct ggccttgcgg ccaatcgttc atcctgaact attgcttcct gctcacacca
    17701 ccccgatgtg atacttcatc ctgaagtgtc cttggccttc ctgaccagcc gaatcatcct
    17761 gaccggttct cattctccat cctggaggtg tcctttaacg cgtcctgcgt catcctcttc
    17821 gcttcatcca gaagcctttc cctgaaacac catcctggtg tgtcctgcag aagtgtcatc
    17881 atcctgatgt tcacttcgtt gtctgactcc ctgtcgacga agatagaatc gtctttttcg
    17941 cgaagtctta caaggcgctt acagacaatg ccttaaggaa aatttcatat gaaagttaag
    18001 aattaacaat caacattttg attttaaatg aaaataacga ttcttatctt tttaagtatt
    18061 cgcttatttc ctggcgatct cctacagagt ctgtaagaga tctctcacaa ccagatgggg
    18121 tatttggatt acagaagagg cttaagttga ttaaggaatt ccgcaagatt tgaggctaaa
    18181 tgcgtccgtt tacgtgttcc cagcgtctct ttgcacactt caccggagag attacacacc
    18241 gagatgacct ctaactcttc ttccagcgtc gcgataaata gcgtgggcgg cagttttagc
    18301 cttttctgag tcaccagatg accaatcaga ttttcctgca cccgacggaa gtcgtcttca
    18361 ctccaggttt gcagcaatgt cagtttgata tcgccaaact gcgcgtgcat atccccggca
    18421 aactgagtcg tataaaaggt atgaattgtg ggttgtatca caatatcaaa agcgcgttca
    18481 accgcgttta cattttgttc cccggtaaac ggctggggtt gccagtatac ggcatcttcg
    18541 gtagttgaaa taatgcacgg tgaaggaaca ccgtacagtt cctcacttaa cggccagctt
    18601 ttatgctctt catgccacgc atcgcagtag cgtgcagtaa aatctttcag ggcttgtgcg
    18661 gtcaaatcgt ccactaattt ctctcttcac ttaaaccaga tacacttgtc gtttagttta
    18721 tctggtttat gacggtgaaa catgtcttct tatgcaaacc atcaggcact tgcgggcctg
    18781 actcttggaa aatcaaccga ttaccgggat acctatgacg ccagcctact gcaaggcgtt
    18841 ccacgcagcc tgaatcgcga cccgctgggt ctgaaagcgg ataacctgcc ttttcacggt
    18901 acggatatct ggacgctgta tgaactttcc tggctgaatg cgaaaggttt gccgaaggtc
    18961 gctgtcggtc atgttgaact tgattacacc agcgtaaatc tgattgagtc gaagagtttt
    19021 aagctctatc tcaacagttt taaccagacg cgttttaata actgggatga ggtgcgccag
    19081 acgctggagc gcgacttaag cacttgcgct cagggtaaga ttagcgtggc gttatatcgt
    19141 cttgatgaac tggaaggcca gccgataggt cattttaatg gcacttgcat tgatgaccag
    19201 gatatcacta tcgataacta tgaattcact actgactatc tggagaatgc cacctgtggt
    19261 gaaaaagtag tggaagagac gcttgtcagc cacctgctga aatcaaactg cctgatcacc
    19321 catcaaccag attggggttc gatccaaatt cagtatcgtg gacgccaaat tgacagagaa
    19381 aaactgctgc gttacctggt ctcattccgt catcacaacg agttccacga acagtgcgtg
    19441 gaacgcatct ttaatgacct gttacgcttc tgccagccag aaaaattgag cgtttacgca
    19501 cgttataccc gtcgtggcgg tctggacatt aacccgtggc gcagtaatag cgattttgtc
    19561 ccatcgacca caagactggt tcggcaataa attttttctc aattttgcgt gctggattca
    19621 cgcagaaggt tgtgaaaggt catcaggcag ggctattgta atcaaaggga atgacgatat
    19681 tcgtcccata aggagttttt cttgattaca catattagcc cgcttggctc catggatatg
    19741 ttgtcgcagc tggaagtgga tatgcttaaa cgcaccgcca gcagcgacct ctatcaactg
    19801 tttcgcaact gttcacttgc cgtactgaac tccggtagtt tgaccgataa cagcaaagaa
    19861 ttgctgtctc gttttgaaaa tttcgatatt aacgtcttgc gccgtgaacg cggcgtaaag
    19921 ctggaactga ttaatccccc ggaagaggct tttgtcgatg ggcgaattat tcgcgctttg
    19981 caggccaact tgttcgcggt cctgcgtgac attctcttcg tttacgggca aatccataac
    20041 accgttcgtt ttcccaacct gaatctcgac aactccgtcc acatcactaa cctggtcttt
    20101 tccatcttgc gtaacgctcg cgcgctgcat gtgggtgaag cgccaaatat ggtggtctgc
    20161 tggggcggtc actcaattaa cgaaaacgag tatttgtatg cccgtcgcgt cggaaaccag
    20221 ctgggcctgc gtgagctgaa tatctgcacc ggctgtggtc cgggagcgat ggaagcgccg
    20281 atgaaaggtg ctgcggtcgg acacgcgcag cagcgttaca aagacagtcg ttttattggt
    20341 atgacagagc cgtcgattat cgccgctgaa ccgcctaacc cgctggtcaa cgaattgatc
    20401 atcatgccag atatcgaaaa acgtctggaa gcgtttgtcc gtatcgctca cggtatcatt
    20461 atcttccctg gcggtgtggg tacggcagaa gagttgctgt atttgctggg aattttaatg
    20521 aacccggcca acaaagatca ggttttacca ttgatcctca ccggcccgaa agagagcgcc
    20581 gactacttcc gcgtactgga cgagtttgtc gtgcatacgc tgggtgaaaa cgcgcgccgc
    20641 cattaccgca tcatcattga tgacgccgct gaagtcgctc gtcagatgaa aaaatcgatg
    20701 ccgctggtga aagaaaatcg ccgcgacaca ggcgatgcct acagctttaa ctggtcaatg
    20761 cgcattgcgc cagatttgca aatgccgttt gagccgtctc acgagaatat ggctaatctg
    20821 aagctttacc cggatcaacc cgttgaagtg ctagctgccg acctgcgccg tgcgttctcc
    20881 ggtattgtgg cgggtaacgt aaaagcagtc ggtattcgcg ccattgaaga gtttggtcct
    20941 tacaaaatca acggcgataa agagattatg cgtcgtatgg acgacctgct acagggtttt
    21001 gttgcccagc atcgtatgaa gttgccaggc tcagcctaca tcccttgcta cgaaatctgc
    21061 acgtaatctc ccctcccccg gtgacgtttg ttgccgggtt ttctcgtttt tggtcactta
    21121 ctcatcaact catttcattt gttatatgaa tgtttcttac caccctcacg cgacaaatat
    21181 catcacagtt aatatgtcat acaatttatg ttgcaacgca aacgtttctc tattttcata
    21241 aaccgtattt tatcgctatg aaaaagaaat tatcgccatg attaactaaa agtattgatt
    21301 ttttcagttc aacctacata tattgcgcgc cctggaagaa gtcagatgtc gtttaatggg
    21361 caaatattgc ccttaaattc tcttttactt ttgatttaca gagtaaagcg ttgggataat
    21421 ctatcttcca agtagattat tgtatttgag atcaagatca ctgatagata cataacttgt
    21481 gtgtatcttt ccgccctcaa attattacgg cggtaaatga ttaagccatc gccgatagac
    21541 agatttcatt tttacggtca ggcaccttcc cgggctgaac tggctaaaag ctgaattatt
    21601 tgcattcctc caggagaaat agatggaaac gactcaaacc agcacgattg cgtcgaaaga
    21661 ctctcgtagt gcctggcgca agacagacac catgtggatg ctgggccttt acggcacggc
    21721 aatcggcgcg ggcgtgctgt tcctgccaat caacgccggt gttggcggta tgatcccgct
    21781 gatcatcatg gctatccttg cgttcccgat gacgtttttt gctcaccgcg gcctgactcg
    21841 cttcgtactg tctggtaaaa acccgggcga agacatcacc gaggttgtag aagaacactt
    21901 tggtattggc gcaggtaaac tgattaccct gctctacttc ttcgctatct acccgatcct
    21961 gctggtttat agcgtggcaa tcaccaatac agttgaaagc ttcatgtctc accagctggg
    22021 tatgacgcca ccgccgcgtg cgattctgtc gctgatcctg atcgtgggta tgatgaccat
    22081 cgttcgcttc ggtgagcaga tgatcgttaa agcgatgagt attctggtgt tcccgtttgt
    22141 tggcgtattg atgctgctgg ctctgtacct gatcccgcag tggaacggcg cagcactgga
    22201 aacgctgtct ctggacactg catctgcaac cggaaacggt ctgtggatga ccctgtggct
    22261 ggcaattccg gtaatggtgt tctcgttcaa ccactctccg atcatctctt ctttcgccgt
    22321 tgcgaagcgt gaagagtacg gcgatatggc agaacagaaa tgctcgaaga tcctggcatt
    22381 cgcacacatc atgatggtgc tgaccgtaat gttcttcgtc ttcagctgtg tactgagcct
    22441 gactccggca gacctggctg cggctaaaga gcagaacatc tcgattctgt cttacctggc
    22501 taaccacttt aacgcaccgg ttatcgcgtg gatggctccg attatcgcga ttatcgctat
    22561 caccaaatcc ttcctcggcc actacctggg cgcacgtgaa ggcttcaacg gtatggtgat
    22621 taaatctctg cgtggtaaag gtaagtctat cgaaatcaac aagctgaacc gtatcactgc
    22681 gctgttcatg ctggtaacga cctggattgt tgccaccctg aacccgagca tcctgggtat
    22741 gattgaaacc ctgggcggtc caatcatcgc gatgatcctg ttcctgatgc cgatgtacgc
    22801 aattcagaaa gtaccggcaa tgcgtaagta cagcggtcac atcagcaacg tattcgttgt
    22861 cgtgatgggt ctgattgcaa tctccgcaat cttctactct ctgttcagct aagtcctttc
    22921 gcgccgcttt cgggcggcgc ttcctccgtt ttaacgcgat gtatttccta tgattagcgt
    22981 attcgatatt ttcaaaatcg gcattggccc ttccagttct cataccgttg gaccaatgaa
    23041 agcgggtaaa caatttaccg acgatctgat tgcccgtaac ctgcttaaag acgtgacccg
    23101 cgtggtggtt gacgtgtacg gctcgctctc tctgaccggt aaaggccacc acactgatat
    23161 cgccattatt atgggcctgg cgggtaacct gccggatacc gtggatatcg attccatccc
    23221 tggttttatt caggatgtga atactcatgg tcgcctgatg ctggcaaacg gtcagcatga
    23281 agtggagttc ccggttgatc agtgcatgaa cttccacgcc gacaaccttt ctctgcatga
    23341 aaacggtatg cgcattaccg cgctggcggg cgataaagtc gtttacagcc agacttacta
    23401 ctctattggc ggtggcttta tcgttgatga agagcatttt ggccagcagg atagcgcacc
    23461 ggttgaagtt ccttatccgt acagttcagc agccgatctg caaaaacatt gtcaggaaac
    23521 cgggctgtca ctctctggcc tgatgatgaa aaacgagcta gcgctgcaca gcaaagaaga
    23581 gctggaacag cacctggcga acgtatggga agtcatgcgt ggcggtattg agcgcggtat
    23641 ttccaccgaa ggcgtgttgc ctggcaaact gcgcgttcca cgccgtgctg cggcactacg
    23701 ccggatgctg gtcagccagg ataaaaccac cactgacccg atggcggttg ttgactggat
    23761 caacatgttt gcactggcag tgaacgaaga gaacgctgct ggcggacgcg tggtgactgc
    23821 gccgactaac ggtgcgtgcg ggattatccc ggcagtgctg gcgtactacg acaagtttat
    23881 ccgcgaagtg aacgctaact cactggctcg ttacctgctg gtagccagtg ccattggttc
    23941 tctttataag atgaacgcgt caatttctgg tgctgaagtc ggctgccagg gtgaagttgg
    24001 tgtggcgtgc tcaatggcgg cggctggtct ggcagaactg ttaggtgcaa gcccggcgca
    24061 ggtgtgcatc gcggcggaaa tcgccatgga gcacaacctc ggtctgacgt gtgacccggt
    24121 cgccggacag gtccaggtgc catgcatcga gcgtaacgcc attgcggcag taaaagcggt
    24181 gaacgccgca cgtatggcgc tacgccgtac cagcgagccg cgcgtctgcc tcgataaagt
    24241 tatcgaaacc atgtacgaaa caggtaaaga tatgaacgcc aagtaccgcg aaacctctcg
    24301 cggcggcctg gcaatgaaga tcgttgcctg cgattaatcg ctctccagag gcctcgtttt
    24361 gcgaggcctc ttcccgattt ctcatccagc cgtagcctgt tccggcatcg aatgttaccc
    24421 ttatcgcctg atctttaagg gggttatcgt ggctgttcat ttgcttattg tcgatgcact
    24481 gaatcttatt cgtcgcattc atgccgttca gggatcgccc tgtgtcgaaa cctgccagca
    24541 tgcgctcgat cagctcatta tgcacagcca gccaacccac gcggtcgccg tttttgatga
    24601 tgaaaaccgc agtagcggct ggcgtcatca gcgtttacca gattacaaag cgggtcgacc
    24661 gccaatgccg gaagagttgc acgacgagat gcctgcatta cgcgccgcct ttgagcaacg
    24721 cggcgtcccg tgctggtcaa ccagcggcaa cgaagccgat gacttagccg ccacgctggc
    24781 ggtcaaagtg acacaggccg ggcatcaggc aacgattgtt tcgacagata aaggctactg
    24841 tcagttactt tcaccgacat tacgtattcg tgattacttc cagaaacgtt ggctggatgc
    24901 accatttatc gataaagaat ttggcgttca accgcagcag ttgcccgatt actggggact
    24961 tgcggggatc agcagttcaa aggtaccggg tgttgcggga atcggaccaa aaagcgccac
    25021 gcagctgctg gtcgagtttc agagtctgga agggatatat gagaatctgg atgcggttgc
    25081 cgaaaagtgg cgcaaaaaat tagaaaccca taaagagatg gcgtttctgt gccgcgatat
    25141 tgcccgctta caaaccgatt tgcatatcga cggcaattta cagcaattgc ggttggtacg
    25201 gtaacggcga gccggatgca aacgattatc aacacattga atttaatgca cttatatacc
    25261 ggataagacg cggctagcgt cgtatccggc attatcacat cagcgcattt accaggcggt
    25321 atggtaaagc tctacaatat cctcaagcgt tgcttcacgc gggttgccac cggtacaaac
    25381 atcatccagt gccgcctgcg ccagtgccgg aatgtcttcc ttgcgtacac caacatcacg
    25441 caaatgtggc ggaataccga catcacggtt gagagcaaac accgcttcaa cagcggcatt
    25501 acgcgcctct tccagccact ttcacgccca taacgcgcgc gatatcgcgg tacttctcac
    25561 cggtaaagtc agcgttatag cgcatgacat gcggtaacag gatggcgttc gcaacaccgt
    25621 gtggagtgtt gtaaaacgcg cccagtggat gcgccatacc atgcaccaac cctaacccaa
    25681 cattcgagaa gcccataccc gcaacatact gcccgagcgc catttcttct ccggcatcct
    25741 tatcaccagc aaccgatcct cgcagcgccc cagcaatgat ttcaatcgct ttaatgtgca
    25801 gtgcatcggt tagcgcccac gcgccacggg taatataccc ctcaatagca tgagtgagcg
    25861 catcgacacc cgtcgcagct ttcagcgctg gaggcatacc atccatcatg tcagcgtcaa
    25921 taaacgccac ctgcgggata tcatgcggat caacgcaaac aaacttgcgc cgtttctctt
    25981 cgtcagtgat cacgtagtta atggtcactt ctgccgcagt acctgctgtg gtaggaattg
    26041 ccagaatcgg tacactgggt ttattggtcg gggaaagccc ttccaggcta cgcacatcgg
    26101 caaactccgg gttgttgctg ataatgccaa tcgctttaca agtatcctgt ggagaaccac
    26161 caccaatagc gatcaggtaa tccgcgccgc tattctggaa tacaccgagc ccttctttga
    26221 cgacagtaat tgttgggttg ggcactacgc cgtcgtaaat cgcccatgcc agccctgcag
    26281 catccatctt atcggtcact ttcgccacca cgccgcattg caccagcgtt ttatcggtga
    26341 cgatcagcgc cttctgataa ccacggcgtt tcacctcatc ggttaaagcc ccaacagcac
    26401 cccgaccaaa ccatgccgtt tcgttcagaa tcattctgtt agccatcatc cttctccttg
    26461 ttgctttacg aaattactct tcaatccgta acccataggt tttgaatttc tccagcacta
    26521 cggcaatctc ttcatcgctc agcactggca ccgggtccgt aatcgccagg gtcgtcaggt
    26581 aaagttgcgc cagcacttca acttcatgcg ccagccataa cgctttttcc agattcacct
    26641 cacaagcgat aagcccatga tgttgtaaca aagttgcctt acgatttttg agagccagcg
    26701 caacatgttc agaaagttcg cgtgttccaa aggtcgcata aggcgcgcaa ggaatagaat
    26761 taccacctgc cgccgcaatc atgtagtgaa tagcggggat cggtcggtta agaatggaaa
    26821 ctgctgtgca atgaacggca tgattgtgaa caaccgcgtt ggcatccggt ctgctttgat
    26881 aggccgccat atggaaacgc cattcgcttg aggggagctt tccttcctca tgtttaccgt
    26941 taccatcaat aaaggcaata tgcgactccg tcagtttttc atatggaatg cctgtaggcg
    27001 taatcagcat cccatcctga taacgtacac tgacgttccc cgctgtcccc tggttcagtc
    27061 ccaggcgggt catttccagg caagtgtcaa taatctgacg agcaagttta tttcgttcca
    27121 ttagctacct ctctctgatt caaaacaggg caataatgtt gttcctttca cactattgaa
    27181 ttagccgttt aattacccac cat
//
LOCUS       DADKRT010000038        26806 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.038, whole genome shotgun sequence.
ACCESSION   DADKRT010000038 DADKRT010000000
VERSION     DADKRT010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 26806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26806
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.038"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..326)
                     /locus_tag="JQ356_001357"
     CDS             complement(<1..326)
                     /locus_tag="JQ356_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY4621502.1"
                     /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT
                     LKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
                     MQNHLDA"
     gene            complement(523..1296)
                     /gene="hisP"
                     /locus_tag="JQ356_001358"
     CDS             complement(523..1296)
                     /gene="hisP"
                     /locus_tag="JQ356_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HAY4621503.1"
                     /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
                     STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWSHMTVLENVMEAPIQVLGLSKQEAHERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
     gene            complement(1304..2020)
                     /locus_tag="JQ356_001359"
     CDS             complement(1304..2020)
                     /locus_tag="JQ356_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4621504.1"
                     /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
                     AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGIYTLEIVKGTEFLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVLHGEIEAARAYGFSTFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
                     SLFRRAEKRWLQHVKPSSTH"
     gene            complement(2017..2703)
                     /locus_tag="JQ356_001360"
     CDS             complement(2017..2703)
                     /locus_tag="JQ356_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311219.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HAY4621505.1"
                     /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
                     SGLIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
                     ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
                     YSVGVKRADL"
     gene            complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="JQ356_001361"
     CDS             complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="JQ356_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HAY4621506.1"
                     /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS
                     QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            complement(3796..4578)
                     /gene="argT"
                     /locus_tag="JQ356_001362"
     CDS             complement(3796..4578)
                     /gene="argT"
                     /locus_tag="JQ356_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HAY4621507.1"
                     /translation="MKKSILALSLLVGLSVAASSYAALPETVRIGTDTTYAPFSSKDA
                     KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
                     AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG
                     VGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
     gene            complement(4844..5413)
                     /locus_tag="JQ356_001363"
     CDS             complement(4844..5413)
                     /locus_tag="JQ356_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HAY4621508.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
                     SLETDFSLREVQALADVTHDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
                     DVINQTVNRVLDQFAISLPEDLFARWQGA"
     gene            complement(5508..7025)
                     /gene="purF"
                     /locus_tag="JQ356_001364"
     CDS             complement(5508..7025)
                     /gene="purF"
                     /locus_tag="JQ356_001364"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HAY4621509.1"
                     /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
                     NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
                     FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQDYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
     gene            complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="JQ356_001365"
     CDS             complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="JQ356_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HAY4621510.1"
                     /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
                     CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
                     RA"
     gene            complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="JQ356_001366"
     CDS             complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="JQ356_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HAY4621511.1"
                     /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
                     PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPA
                     PVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
                     VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT
                     PN"
     gene            complement(8461..9729)
                     /gene="folC"
                     /locus_tag="JQ356_001367"
     CDS             complement(8461..9729)
                     /gene="folC"
                     /locus_tag="JQ356_001367"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HAY4621512.1"
                     /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
                     LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
                     SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
                     ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSAKPAIVGEPEMPSTIADVAQEKGA
                     LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
                     IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
                     DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA
                     KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
     gene            complement(9799..10713)
                     /gene="accD"
                     /locus_tag="JQ356_001368"
     CDS             complement(9799..10713)
                     /gene="accD"
                     /locus_tag="JQ356_001368"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HAY4621513.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMTARNRLHSLLDEGSLVEMGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPLGFQRSEFLIEKGSIDMIVRRPEMRLKLASILAK
                     LMNLPAPNPEAPREGVVVPPVPDQEPEA"
     gene            complement(10869..11528)
                     /locus_tag="JQ356_001369"
     CDS             complement(10869..11528)
                     /locus_tag="JQ356_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY4621514.1"
                     /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFS
                     NPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLIFTYAGYFFGMLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAA
                     K"
     gene            complement(11611..12423)
                     /gene="truA"
                     /locus_tag="JQ356_001370"
     CDS             complement(11611..12423)
                     /gene="truA"
                     /locus_tag="JQ356_001370"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HAY4621515.1"
                     /translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPDDIAVRWVKA
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
                     QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
     gene            complement(12423..13436)
                     /locus_tag="JQ356_001371"
     CDS             complement(12423..13436)
                     /locus_tag="JQ356_001371"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY4621516.1"
                     /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG
                     EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
                     EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
                     ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
                     EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
                     NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="JQ356_001372"
     CDS             complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="JQ356_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HAY4621517.1"
                     /translation="MKILVDENMPYARDLFSRLGEVTAVPGRPIAVAQLADADALMVR
                     SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS
                     LLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS
                     LDELVQHADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALL
                     TCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSK
                     FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG
                     EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
     gene            14737..15732
                     /locus_tag="JQ356_001373"
     CDS             14737..15732
                     /locus_tag="JQ356_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HAY4621518.1"
                     /translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
                     TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
                     LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
                     DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
                     QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
                     NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR"
     gene            complement(15729..16907)
                     /locus_tag="JQ356_001374"
     CDS             complement(15729..16907)
                     /locus_tag="JQ356_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4621519.1"
                     /translation="MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH
                     DLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA
                     ILPVSAPLKFALLVVGRLILGFGESQLLTGALTWGLGIVGAKHSGKVMSWNGMAIYGA
                     LAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGLI
                     WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRF
                     GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ
                     VRGTALGGYAAFQDIALGVSRPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
                     "
     gene            complement(17227..18447)
                     /gene="fabB"
                     /locus_tag="JQ356_001375"
     CDS             complement(17227..18447)
                     /gene="fabB"
                     /locus_tag="JQ356_001375"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HAY4621520.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
                     RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI
                     AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
                     GGTNATLVMRKLKD"
     gene            18606..20612
                     /gene="mnmC"
                     /locus_tag="JQ356_001376"
     CDS             18606..20612
                     /gene="mnmC"
                     /locus_tag="JQ356_001376"
                     /EC_number="1.5.-.-"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HAY4621521.1"
                     /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK
                     FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL
                     TSQQDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR
                     GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIAC
                     ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR
                     RFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVA
                     TNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQ
                     QATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQ
                     NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV
                     RCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAP
                     LCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG"
     gene            complement(20733..21011)
                     /locus_tag="JQ356_001377"
     CDS             complement(20733..21011)
                     /locus_tag="JQ356_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HAY4621522.1"
                     /translation="MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELES
                     GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ"
     gene            complement(21045..21593)
                     /locus_tag="JQ356_001378"
     CDS             complement(21045..21593)
                     /locus_tag="JQ356_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HAY4621523.1"
                     /translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPY
                     NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
                     ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA
                     LQNYYHTPELTAEQFPWPEALN"
     gene            complement(21593..22402)
                     /locus_tag="JQ356_001379"
     CDS             complement(21593..22402)
                     /locus_tag="JQ356_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HAY4621524.1"
                     /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQ
                     YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
     gene            complement(22402..23226)
                     /gene="mepA"
                     /locus_tag="JQ356_001380"
     CDS             complement(22402..23226)
                     /gene="mepA"
                     /locus_tag="JQ356_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HAY4621525.1"
                     /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
                     IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA
                     GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI
                     FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA
                     DSLECEDQPLPPPGDGCGAELQSWFAPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
     gene            complement(23230..24315)
                     /gene="aroC"
                     /locus_tag="JQ356_001381"
     CDS             complement(23230..24315)
                     /gene="aroC"
                     /locus_tag="JQ356_001381"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HAY4621526.1"
                     /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGILLTEADLQHD
                     LARRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
                     LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRQRAQNADVKTDIPRW"
     gene            complement(24350..25282)
                     /gene="prmB"
                     /locus_tag="JQ356_001382"
     CDS             complement(24350..25282)
                     /gene="prmB"
                     /locus_tag="JQ356_001382"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY4621527.1"
                     /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKEQLLAAREYFAIYKD"
     gene            25448..25999
                     /gene="smrB"
                     /locus_tag="JQ356_001383"
     CDS             25448..25999
                     /gene="smrB"
                     /locus_tag="JQ356_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HAY4621528.1"
                     /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
                     KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWLPPELP"
     gene            complement(26072..26785)
                     /locus_tag="JQ356_001384"
     CDS             complement(26072..26785)
                     /locus_tag="JQ356_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005007603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2544 domain-containing protein"
                     /protein_id="HAY4621529.1"
                     /translation="MATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDSR
                     VSMSACPGLEQYDSQTKTGWTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDD
                     DFPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQSTGGVIEQTLPTFLMEN
                     GKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDT
                     TSRQPIDSTCRFTYILNMY"
BASE COUNT         6611 a         7328 c         6761 g         6106 t
ORIGIN      
        1 gcatcaagat ggttttgcat tgccgcaatg gaataacgca tcatgcgaaa agccattaat
       61 tcttccggct tactttggtg ctctatcact acataaatat aacccactcc ctcctgcgtt
      121 ttcacagacc acaagaggtc ggaataatat tgccgcaggt cttcatcaat aaaactgttt
      181 ggttccagtt taagcgtcgt taaatcacac agtttgcgca gcggcgcggg aagatgaata
      241 tcaataaaat cccgcgcggt gtctggatgg cgtaaaaaag atttaaatac cgcatcatgc
      301 ggcgtggaag ttgtcgatat tgtcatggcg ttccgtcacc cctcaaattt aagatgacgc
      361 gacaataacc acgattaaca cccaatgcag caggcagttt ttatctttgg acagcgaatt
      421 cagaagtatt tttagcggac tgcaactttt acatttcagc ggaagctgac tcgcaaattc
      481 cccatgaaaa tactccggca gcgttagcca ccggagagga aattatttca gcgatccctt
      541 aaggaactgt tgcagacgag ggctttgcgg gttgccaaat aactgctccg gcgcgccctc
      601 ttcttctatt ttcccctgat ggaggaaaat gacatgagta gaaacatggc gagcaaagcc
      661 catttcgtga gtcactacca ccatggtttt cccctcttct gccagttgct gcataatacg
      721 caacacttcg cctaccagtt caggatcgag cgccgaggta ggttcatcaa acagtaaaac
      781 ttccggttcc atcgccagcg cccgcgcgat agaaacacgc tgttgctgac cgccggaaag
      841 atgcaccgga tatttcccct gcgcacgttc gtctatcccg acttttgcca gatacttgac
      901 cgcccgctcg tgcgcttcct gcttgctcag gcccaacacc tgaatcggcg cttccatgac
      961 gttttccagc accgtcatat ggctccagag attgaagtgc tggaatacca tcgtcaggcg
     1021 tgtgcgcagt aagcgcagtt gatttttatc ggcgactttg agttgaccgt ctttgtcgcg
     1081 caccagattg atcgtctggc cattgaccac gatcgaccct tcactcggtt tttcgaggaa
     1141 gttaatgcag cgcagaaagg tacttttccc cgatcccgac gatccgatga tgcttattac
     1201 atctccggca ttcgcttgca gtgagacccc tttcagcact tcatgttcgc cgtagcgttt
     1261 gtgcaaatcg ataacgttta atttattctc ggacatcgta ttctcagtgc gttgaagaag
     1321 gtttcacatg ctgcaaccag cgtttttccg ctctgcgaaa gaggctgatc aggacataag
     1381 agatgattaa atagagcacc gcggcaatgc cgaaggcggt aaaaggttga tacgtggcgg
     1441 cgttaatatc gcgggctatt ttcagcagat ccggcacagt ggccgtaaac gccagcgcag
     1501 tagagtgcag catcaggatc acttcgttgc tgtatgccgg taacgcaata cgcagcgcag
     1561 aaggcaaaat aatgcaacga tacattttaa aagtcgagaa gccataggct ctggcggctt
     1621 caatttcccc atgcagaacc gaacggattg ccccagcaaa aatctcggta gtgtaagcgc
     1681 aggtgttaag cgtcagcgcc agcacggtac agttcaggcc actgcggaag aaagcgttaa
     1741 ggaattcggt tcccttaaca atctcaagcg tgtatatgcc ggaatagaac accagcaact
     1801 gaacatacag cggcgtaccg cgaaaaatat aggtaaataa ccagattgga aactggatgt
     1861 atttattact ggagacacga ccaatcgcca gaaacagcgc caggactccg cctatcacta
     1921 ccgacaaaat aagcagccac agagtgatcg ccacaccagt aaagcgataa ccgtcggtcc
     1981 acagcagcgg tttccagtat tcatgtaaga tttcgatcac aggtcagccc tcttcacacc
     2041 cacggagtag cggcgctcaa ggaacagcag cacaccattg gaaacagtgg tgaaaaccag
     2101 gtaaatcacg ccacagacga tggcgaaata gaacggttcc caggtacttt tgcctgccag
     2161 ttgggtggct ttgaccacat cttccaggcc gagtaacgaa accagtgcgg tagatttgag
     2221 gatcacctgc cagttgttgc caatgcctgg cagggcgtaa cgcatcatcg ccggaaacat
     2281 gatccgccga aacacttgcc cacgagtaaa accgaacgcc gtcgccgcct ctatatgtcc
     2341 tttcggcact gccataaaag caccacggaa cgtttcggta aaataagcac cgtagataaa
     2401 accgagagtg ataataccag cgaccatcgg atcgatatca atctgcccga cgcccatcgc
     2461 ctccgtcacc gtgtttagcg caatctgcaa accgaagaaa atcagcagca tcaacactaa
     2521 gtccggcacg ccacgaatca gcgtggtgta cccttcgaaa atcagccccg aaagccgatt
     2581 ttgcgagagc ttaccgccag cgccaattaa accgatgatt acagcgagca ctacagagct
     2641 gatagccagc tccagcgtga cgagcgcacc ctgtaaaata acacctgaaa acccatataa
     2701 catgctgcct gtcctgtcgt gtgtggtgaa ttaccgcctc ttgtctccct ccggttaccc
     2761 gaagggagcg ggctttcttt caccgatggc gattagccac cataaacatc aaaatcgaag
     2821 tactttttcg ctaatttctc gtaagtaccg tcagcgcgca tttcggcaaa ggctttgttc
     2881 agtgcttcgc gcagttcgtt atcttcttta cgcaggccca tgccggtccc tacgccaaac
     2941 agtttttcat ctttaacaga cgggccaccg aatttgtaat ctttaccgac aggttgtttg
     3001 aggaaacctt cgctggcagc gacctcatcc tggaacgcgg catcaatacg tccggcagtc
     3061 aggtcagaat aaatgttgtc ctgcccctga tacgagacga tttcaatgcc ttttggtgcc
     3121 caatgttcat taccgaacgt ctcctgggtg gtgccctgca atacgcctac ccgtttgcct
     3181 ttcagcgact cgactgtcgg ctgaatgtca gaatttttcg ccaccaccaa acgagaatcg
     3241 gcagcgtaca gtttgtcggt gaaggctatt tcttgctgac gtttttccgt aatggaaagc
     3301 gatgacatga tggcgtcaat cttcttcgct tttaaggacg ggattaacgc atccagcgga
     3361 ttttcgacaa acgtacattg cgtattgatg cgtttgcata attcctttgc cagatcgata
     3421 tcgaagccaa ccagttcgcc ttgtgaattt tttgattcaa atggcgcata ggtcgggtcg
     3481 gtaccgatgc ggatgttttg cggaatcgca gcaaatgccg cagttgcgct ggagaaggcc
     3541 agaaccagag agagcgatag caccagtttt ttcataatgt cctcaactga cagtcttttt
     3601 atagggaata tttacaggtt tgttacactt atcgtgccat aaaattgacc atcaaggcaa
     3661 aatatcccgc cccgttagat gtattatttt tcattaaaaa tgcttaagta tgcatttcaa
     3721 tgcaccacga tagtgcaaca aacctagcgt gcaccatgat gatcattcca tcaggtacag
     3781 cttcccagcg acgtatcagt caccgtagac attaaagtcg aaatactttt tcgccatctt
     3841 gtcgtaggtg ccgtcctgac gcagctcgcc aagcgcctta ttgaaggcag ccgtcagttc
     3901 agcatcatct ttacgtagcc ctacaccggt gccatcaccg aagtattttt tgtcttttac
     3961 tgatgagcca gcaaaggcga aatctttacc agcaggttgc ttgaggaatc cttcgctggc
     4021 agcaacttca tcttgtaacg cagcatccag acgtcctgca gccagatcgg aatagaccaa
     4081 atcctggttg gcataggcca ccacatccac gcctttgcta cgccaggtct cgttagcgta
     4141 agcttcctgg gttgatccct gcagcacacc aacatgttta cctttcagtg aatccagcgt
     4201 tggctgaatc ggtgaacctt tggcagcaat caaacgagaa tctgcggcgt acagcttgtc
     4261 ggagaaggca atctcctgct gacgtttatc ggtaatggaa agcgacgaaa taatggcgtc
     4321 gatttttttc gctttcagtg aggggatcag cgcgtcaaag tcactggcaa cccaggtaca
     4381 tttcacctgc atccgtttgc acatctcgtt accgagatcg atatcaaagc caacaaaatc
     4441 acctttagca tctttcgacg agaacggcgc ataggtggta tcggttccga tacgtaccgt
     4501 ctccggtagc gccgcatagc tggaagccgc tacggagaga ccgactaaca aagacagagc
     4561 gagaatcgac ttcttcatac ataaccctca agtgaaaatg gcttttttat gttgtgtatt
     4621 gtgttgtgtg tttgcaggct ctttcatgca ggtcttatgc catcttgacg acaacagtaa
     4681 cattcaacgt taaatatgtt aataagacgt tgcattattg tcctgaagtt gaagatagca
     4741 ggtatagcgg ttgaatcgca gcgtttcgat tgaatggcag aaacaaaatg tcgaggattt
     4801 gatcgcggtt gcaaaattgc cctgaaacag ggcaacagcg gagttatgcg ccctgccagc
     4861 gggcaaagag atcttcagga aggcttattg caaactggtc aagaacacga ttaaccgtct
     4921 gatttatcac atcatcaagg gattgcgggc gatgataaaa cgccggaaca ggaggcataa
     4981 tcaccgcacc gatttctgcc gcctgagtca ttaaacgcag atggcctaag tgcaatggtg
     5041 tttcacgcac gcagagcacc aacgggcgac gctctttcag caccacatct gccgcacggg
     5101 tcagtaagcc atcagtatag ctatggacaa tgccggaaag ggttttgatt gaacagggta
     5161 aaatcaccat ccccagcgtc tggaaagaac cggaagagat gctggcggaa atatcgcgcg
     5221 catcgtgcgt gacatcagct aatgcctgca cttcgcgcag ggaaaaatcc gtttcgaggg
     5281 ataaggtctg gcgcgccgcc tggctcatca ccagatgcgt ttcgatatct gtgacatcgc
     5341 gcagaacctg taataagcgc acgccataaa tcgcgccgct ggcaccgctg atgcctacaa
     5401 tgagtcgttt cataaatagt tgccctgtca gacttgcagg cagactttgc agtatttcgg
     5461 cgggagttgc aagtcagggt gccagaccgg caccctcagc gaaggcatca tccttcgtta
     5521 tgcatttcga gattttccac ttcgttctga cgttgcactg ctttggcgtc atcattacgt
     5581 aacgtatcga ggaaatcgag gtagtcctga tcaacatctt tggtgacgta gacgccgttg
     5641 aacaccgagc attcaaactg ctggatatcc ggattttcag cgcgaacggc gtcgatcaga
     5701 tcgttcagat cctggaaaat caacccgtca gcaccgatga tctggcgaat ttcatcaact
     5761 tcgcgaccgt gagcgatcag ttccgtggcg ctcggcatat caataccata aacgttcggg
     5821 aagcgaattt ccggggccgc agaagcgagg tacactttct tcgctccggc ttcgcgtgcc
     5881 atctcgataa tctgctcaga agtggtgcca cggacgatgg agtcgtcgac cagcaggacg
     5941 tttttatcgc ggaactcggc gcggttggcg ttcagtttac ggcgcacgga cttacgacgc
     6001 agctgctggc ccggcatgat gaaggtgcgg ccaacatagc ggtttttaac gaagccctgg
     6061 cggtacggct tgcccagaat acgagcaatt tccagcgcga tatcacacga ggtttccggg
     6121 atcgggatca ccacgtcgat atccagatct tcccattcgc gggcaatttt ctcacccagt
     6181 ttcgtgccca tattcacacg cgcgctgtaa acggaaattt tgtcgataaa cgagtccggg
     6241 cgggcaaagt atacatactc aaacaggcac ggattgctga ccggattgtc agcacattga
     6301 cgggtaaaca actgcccttc ttcagtgatg taaatcgctt cgcccggcgc gacgtcacgc
     6361 aggaaatcaa agcccagcgt atcgagcgct acgctttcgg aagcgaccat atattctgta
     6421 cggttctcgt caatatcacg ttttcccagt accagcggac gaatcccgtt tggatcgcgg
     6481 aaagcaacca taccgtggcc gataatcatc gccacacagg catatgcgcc gcggattaag
     6541 cggtttgtgg cagcaatggc agcgaaaata ttgtcggctt ccagcgggta gtggcggaag
     6601 ttgtccagct cgctagcgaa gatattaagc agaatttccg agtcggaagt ggtgttgatg
     6661 tggcggcgtt tttcttcaaa cagtttttta cgcaactcgt gagcgttggt cagattgccg
     6721 ttgtgggcaa gcgtaatgcc atacggggag ttaacgtaaa acggctgcgc ttcagaggcg
     6781 ctggagctgc cagccgtagg gtaacgcaca tgaccaatgc ccatattgcc ctgcaaacgc
     6841 tgcatatggc gagcttcaaa tacatcgctc accagcccgt tcgctttacg caaacggaag
     6901 cagttattgg catctatggt gatgatgccg gcggcatcct gaccgcgatg ctgaagcacc
     6961 gttaaggcat cataaatcga ctggttaacc ggcataacac cggcgatacc gacaataccg
     7021 cacatacgtc tttttcctcg ttaagccaca tctcagagca cttacgctct gggcaagaaa
     7081 cttgacgagc tttgcagata atcaaaaaac catctgatga taaaactgaa ctgcgggatc
     7141 agctgtgatt tgctccagtc ttcgcttttc gacaccccgg taaaggagtc gagaaagaag
     7201 agaatggcgg caacaatcaa cacaccgcgc aacgcaccga aacagacgcc cagcacccga
     7261 tcggtgcctg acaaccccgt tttctccacc aactggccta tcacgaagtt cacgatagca
     7321 ccaacgatca gggtagcgat aaacagtacc gcgatggcaa ttccatttcg aaccagttcg
     7381 tcttcaaagc ccgtaaacca gactgacagg taagtgtagt aatgactggc aacaaagaaa
     7441 gcacaacccc atgtcaccag cgataacgct tcacgaacaa agccgcggat caggctaacc
     7501 agagaggaaa aagcaatcac cgcgattatg gcgtaatcaa tccagaccat atgtgtccca
     7561 cgattttacg ccctgtcatc ctgttcgggg cgcattctaa cagaaaaaga aaacgtttgc
     7621 gtagggattt ccttcccacg catcaataaa aatggcgctg aaaaaatatt caacgccatc
     7681 gactttttat gcctttgcgg catcgtgcaa tgcgtgtcgg atgcggcgta aacgccttat
     7741 ccgacctacg gttctaacac tgcccaagcc tgataagacg cgccagcgtc gcatcaggca
     7801 agactgtatt aattcggcgt atagcccatt accacgccac ttaagccaga aagttgcttc
     7861 aactcaccca gcgaaccttt cagcttatct ttcgaggcat ccggcccaac cagaatacgg
     7921 gtaattttac cctgcactgg cgtggatggc gacgtataaa cccgataacc ggcaccgcgc
     7981 agcttaccga caatctcatt cactttatcg gcatttttca gcgcacccag ttgcacaaca
     8041 taggctttac ccgttggcgc tgctttttct tccacgaccg gcttcggttc tggcttcggc
     8101 gcaggtggtg cttcaacctt cggtttaggc ggctccaccg gtttcggctt cggtggggcg
     8161 accggtgcag gttccggttc aaactcggtg ttattggctg caatagtggc cggatcgagc
     8221 gacggtgctg cggcatcacc tgcccgcacc tcttccgctg cgccttccgg cggctgcgtc
     8281 ggcaacgcct gggtggcggc tggcatcata tcaggctcat cgcgatcgcc cgcttttgga
     8341 accagcggga tagccgcaaa ctcatcctga taatgttttt tctgcccgtc cagcagccct
     8401 ggaagtacaa tcacccccag cgccaccagc acgatcgtgc ccactaaccg attctgaaac
     8461 ttacttgcca ccgcttctcc tcgcgtcaat cacttccatg acatgtgcga ccgtgtggaa
     8521 agaaccacac accagcacgg tgtcttccgc tttagcgtcc gccattgcgg catcccatgc
     8581 ctgcgcaacg ctatcaaatg atttgccgtt acccaaatgc tcaagcagtt gttctgccgt
     8641 ggcaccgcgc ggcccttcca gtggcgcaca ataccagtca tcaaccacgc ttttcaacca
     8701 ggccagagtt ccggcaatat ctttatcatg tagcataccg ataaccgcca gcacgcgccc
     8761 gtttttcggt agcgctttca tacgcccggt gagatattcc gccgcatgtg gattatgcgc
     8821 gacatcaaaa ataacgcgtg gcgactcgct cacaatctgg aaacgtcccg gcaaaattgc
     8881 gctggcaatc ccgtcgcgaa tggcattttc actgacttcc agcccgctgg cacgcagtgc
     8941 cgccagcgct gttgcggcat tcggttgcgg gacaagcggc aacggcagat tttccagcgt
     9001 gccgtgagca tcgctaaacg cccagtcatg atcggtgacg gaatagttcc actcaacgcc
     9061 ccgacgttgt aacagtgcac ctttttcctg cgccacatca gcaatggtag aaggcatttc
     9121 cggctcaccg acaattgccg gttttgcgct gcgaaagatg cctgctttct cgcgaccaat
     9181 actttcgcga tctggcccca gccagtcggt atgatccagc gcaatactgg ttactaccgc
     9241 gacatcggca tcgacaatat tggttgcgtc cagacgaccg cccagcccta cttccagaat
     9301 caccacgtca agttgtgcct gtttgaacag ccacaacgcc gacagcgtac cgtactcgaa
     9361 ataggtcagg gaaatatcac cgcgtgccga ttcaatctcc gcaaaagagg cggtgtgggc
     9421 cgattccggc aattcctgac cctgcacacg tacgcgctcg gtataacgca ccagatgcgg
     9481 cgaactgtag acgcccactt tgtaccctgc cgccatcaga atcgactcca gcgtacggca
     9541 ggtggtgcct ttgccattcg tacccgcaac ggtaaacaca aatggcgctg gtttcagaac
     9601 gccaagacga gccgcgacct ggctcacgcg ctcaaggccg agatcgatag ttttactgtg
     9661 caggttttcc agataagaaa gccacgaagc cagaggcgac gcggcttgag gagtgcgttt
     9721 gataatcatg gtatccgctg attcgttacg gtgagaatag caaaagggca gagccagtgg
     9781 ccctgccctt atcagttatc aggcctcagg ttcctgatcc ggtaccgggg gtaccactac
     9841 gccttcacgc ggcgcttcag gattcggcgc tggcagattc atcaacttcg ccagaatgct
     9901 cgccagtttc aggcgcattt ccggacgacg gacgatcatg tcgatcgagc ctttctcgat
     9961 caggaattca ctgcgctgga atcctagcgg cagtttttcg cgaacggtct gttcgataac
    10021 acgcggaccg gcaaagccaa ttaacgcttt cggttcagcg atgttgagat cgcccagcat
    10081 ggcgaaactt gcagaaacac cgcccatcgt cgggtcggtc agcacggaga tgtacggcaa
    10141 gccgcgctcc tgcatttttg ccagtgccgc agaggttttc gccatctgca tcagcgacat
    10201 cagtgcttcc tgcatacgtg cgccaccaga ggcggagaag cagatcagcg ggcagttatc
    10261 ttccagcgcc tgctcaacgg cacgcacgaa acgtgcaccc acaacagacc ccattgaacc
    10321 gcccataaag gcgaactcga atgccgcagc gacaaccggc attccataca gagtgccttt
    10381 catcaccacc agcgcatctt tttcgccggt ttctttctgc gcagaagcca gacggtcttt
    10441 atacttcttg gagtcacgaa acttcagcac atctttcggc tcaagctcgc tacccatctc
    10501 cacaaggctt ccttcatcta acaggctatg caggcgatta cgcgctgtca tacgcatgtg
    10561 atggtcacac ttcggacaga cctcaagatt acgttccagc tcagcgcggt ataaaacctg
    10621 accgcagcta tcacacttag tccacacccc ttcaggaatg ctcgccttgc gggtgggagt
    10681 aatgttgctt ttaattcgtt caatccagct cattagggac ctttctgtct gaacctggtt
    10741 cgatgccagt tttatctttg gggacgcata atgccatttt tgcccccaac agaccatgaa
    10801 tgttgcacat taaaacataa cagcccgaaa ctttggataa aaaagtggtc gaaccgcgga
    10861 gttacttttt attttgcggc gcgtgccgca gcgcgtttgt gacgaataaa ttcgaaaacc
    10921 ccaggcaata ttgaaacaaa aataatgcca acaatcatca gcttaaggtt gctctgaatg
    10981 aaggggagca tgccgaagaa ataacccgcg taggtaaaaa tcagtaccca caacagtgcg
    11041 ccgatcacgt tataagcggc gaaatgacgg tacgacatgt ggcccattcc cgcaacaaac
    11101 ggcgcgaacg ttctgacgat cggtacaaaa cgggcgagaa taatcgtttt gccgccatgt
    11161 ctctcgtaaa actgatgagt cttatcaaga taactgcaac gaaagatttt cgaatccggg
    11221 ttactgaaca gtttgtcacc aaataaccgt ccaatggtat agttcactgc atcaccgaca
    11281 atagcggcaa tcaacataag caccaccatc atatggacat tgagatcgtt agtttccagc
    11341 gacgccaatg caccagcaac aaacagcagc gaatcaccag gcaggaatgg cgttaccacc
    11401 agccccgttt cgcagaacag aatcaaaaac agaatggcat aaacccagac gccgtactcc
    11461 gcgaccagct ctgccagatg cacgtcaatg tgcaggataa aatcgatgag gaaataaatc
    11521 aggtccatat ttgcctatgc cttgtactcg tcatctttca ggctgtaact acgttggcta
    11581 cagcctgaaa tgttccgagc attattctcg ttagtccgcc agaaatagcg ggcccattgg
    11641 cggttttgga agatcatacc ggtcagggta atccaccgcg accagataca gcccttccgc
    11701 ttttgccgtt gctgccgcca gcgttctgtc ctttgccgcc agcaactctg ctatccagct
    11761 ctccggctgg ttgtgggcac cgacttccat caggctgccg acaatattcc tgaccatatg
    11821 atgtacaaag gcattcgctt tgatatctac caccacataa ggaccgtgac gcgtgacatt
    11881 aatatgcata acgttgcgcc acggggttcg ggactggcac tgcaccgcac ggaacgaggt
    11941 gaaatcattc tcgcccagca agcattgcgc agcccgatgc atccgttcag cgtccagcgg
    12001 ttcgtaaaaa tgggttaccc ctttactcag taccgccggg cgcagccgat gattgtagat
    12061 gatgtagcga taacggcgag ccgtggcgct aaatcgggca tgaaaatcat caggtacagc
    12121 tttaacccaa cgcacggcga tgtcatcagg taaattcgca tttacgccca aggtccacgc
    12181 cgcgtctttg cgctgcgcgg ttgtttcgaa atgcaccacc tgcccggtac cgtgtacccc
    12241 tgcgtcagta cgcccggcgc agaagacggt gatgggttcg ttcgccacct gggagagcgc
    12301 cttttccagc ttctcctgca cactgcggac ttcattctgc cgttgccagc cgtaatactt
    12361 actgccgtcg tactcaatgc ccagcgcaat tttataaact ggcagttgtt gctggtcgga
    12421 cattagtaca gatactcctg caccagtttc tcggcgattt ttactgccat cagcgcgccg
    12481 ccaaagcgaa cgttatcggc caccgaccag aactggactt gctccggcat accgtagtca
    12541 ttacgcacgc agccaacaga aagatgcgga gtacccgaag catcccctac ctgagtcggg
    12601 aattcgttct cttcagagag cacaatatct tcgccctgag caaacgcatc acgcgcttct
    12661 tctgccgcca gcggacgcag tgcttcaaag ttgaccatct gggcatgacc gtagaatacc
    12721 ggtgcctgga cgacgcttgc cgaaatcatc agcccttcgt cctgcaggat tttgcgtact
    12781 tcgtcaacga tacgacgttc ttcacgcacg ctaccttcgc tatccggcaa caacggcagc
    12841 atattgaacg ccagttgacg accgaagaaa tcttcttcgt caatcggaat gccgttgagc
    12901 aatttcgcac tctgccccgc taacgcatcg accgcttttt tgccctgggc ggaggctgaa
    12961 atcaggctgg taacactgat acgcgacaaa ccgccctgat cgattaacgg tttcagtgcc
    13021 gccagcagct ggctggtcag actgtctggt acggcgatga cattccggtt gcggtaatcg
    13081 gtcagtacaa acgggtttac ttccggcacc accagcggta cgtcgggttc gagagcaaac
    13141 agtccgctgc tgtcgatcac caggcaacct gagttggtcg cttcttcaac ccaggcagcg
    13201 gtagcttctt tgcctgcgac aaaaaatgcc agctgcgcct gcgtccagtc gaattcagcg
    13261 gcatcctgca cggtgattgt tttaccacca aagcgcagtt gttcgcctgc gctttcgtta
    13321 cgtgccagtg cataaatttc cccaaccggg aactgacgtt cagccagcgt ttcaagcagg
    13381 gcttcgccca cagcgccagt tgcgcccagg acggcaatgt tccagccttc agacatggtg
    13441 gtttactcca gaaatagcaa agctccctgc caatgttaca gcagagagca tgaagaagag
    13501 attaacgtgc cggatgatga acggcgttaa aacccagttt acacagcaat gatgccgcac
    13561 tggcgtcatc acaaattaca tacagagatg accattcacg gcgctcaaga tagtttttgc
    13621 gcagtttatc gaactcaccc ggtatcccgg cgactttacg cagcggtgcg tcatcgcggc
    13681 gcacatcata caccaaatgc accagccttt tcagcgtcgg ttgatcgagc gggccatgca
    13741 gcgtaatgcg accaaactct ggcgcgggca gtaatgtatc cagcgcaacg tgctgttcat
    13801 gcccaataaa cttgctataa gcttcaaaca cttgcgtagt accgcgtgct ttaccttcca
    13861 gggtataacc tgcgatatgc ggcgtgccga tatccacttt tgtcagcaac tccacgttaa
    13921 gttccggttc gccttcccag acatccagca ctacgcttaa cttctggcct tcattcaggc
    13981 aggtcagcaa cgcagtatta tcgacgactg cgccacggca ggcgttaatc agaatcgctc
    14041 ccggcttcag gctacggatc agtttttcat ccgccagatg cagcgttttg tacggcccat
    14101 ctttgaagag tggcgtatgg aaagtcagaa tatccgcatg ctgaactaat tcatccagcg
    14161 agcggaaatc accctcatcc ccacggtcag cgcgaggcgg atcgcaaagc aatgttttaa
    14221 tccctaacgc ttccagtcgc gcctgcaatc gacgtccaac gttaccaacg cccacgatcc
    14281 ccaccgtacg gtcgtgcagt gaaaatccat cgcgttcggc aagcatcagt agtgaggaga
    14341 aaacatattc caccaccgca atcgcattac agccaggtgc agcggaaaaa ccaattcccg
    14401 cctgcttcaa ccatgcttca tcgacatggt cggtccccgc agtggcagtg ccaacaaatt
    14461 taatgggttt tcctgccagc aaagattcat tcactttcgt gaccgaacgc accatcagcg
    14521 catccgcgtc tgccagttga gcgacggcga ttggacgccc gggaaccgcg gtcacctcac
    14581 ccaaacggct aaataagtcg cgggcataag gcatattttc atcaacaagg attttcacgt
    14641 ttgtgttacc tgtatgagac gagagttaac cggacaagtg tgccataatc tcgcggccag
    14701 gcatacttgc gaagatttca ggtataagga tacgtaatga tacaacctat ttccggccct
    14761 cctcctgggc aaccaccagg tcagggagat aacctgccgt ctggcgcggg caatcagcct
    14821 ttatccagtc agcaacgtac ttcgctggaa agcttaatga cgaaagtgac ctcactgacg
    14881 caacagcaaa gagcagaact gtgggcgggt atcaggcacg atattggtct gtcgggagat
    14941 tcaccgctgc tttcgcgtca cttccctgcc gctgagcata atctggcgca acgtctgctg
    15001 gccgcgcaaa aaagccattc tgcccgccag cttttagcgc aattagggga gtatttacgt
    15061 ctggggaata atcgtcaggc ggtcacggat tatatccgtc ataactttgg tcagacgccg
    15121 ctgaatcagc tctcaccgga gcaattaaaa accattctca ccctgttgca ggaagggaag
    15181 atggttattc cgcaaccgca gcagcgcgag gcgaccgacc gtcctttatt accggcggag
    15241 cacaatgcgc taaaacagct ggtgaccaaa cttgcggcgg caacggggga acccagcaaa
    15301 cagatctggc aatcgatgct ggaactttcc ggggtgaaag atggcgagtt aattccagcg
    15361 aaactgttta accatctggt gacctggcta caggcgcgtc agacgctaag ccagcaaaat
    15421 acgccgacgc tggaatcact acagatggcg ctaaaacaac ctttagatgc cagtgaactg
    15481 gcggcgttat cggcatatat ccagcaaaaa tatggccttt ctgcgcaatc atcgctttct
    15541 tctgcccagg ccgaggatat tcttaatcag ctttatcaac ggcgggttaa agggattgat
    15601 ccgcgtgata tgcaaccgct gcttaatcct tttccaccga tgatggacac gttgcaaaat
    15661 atggcaacgc gtcccgcgct gtggatactg ttagtcgcga ttatcctgat gctggtctgg
    15721 ctggttcgtt aaccccgacg aaatgacagt atcgtgacaa taatacccag caccgcagag
    15781 atcgccccgg caagaaatac cgaagagtaa ccaaacgtgg tcgccagcat tcccgccagc
    15841 ggccgggaga cgccgagggc gatatcctga aacgcggcgt aaccgcccag tgcggtgccg
    15901 cgaacttgtg aggggacgcg tttaaccacc tccacgccca gcgcaggaaa gataagcgaa
    15961 catccggctc cggttaacgc cgcgcccgct aatgcgaccc atgcacctgg ggcttgccag
    16021 agcagcaaca agcccaccgt ttctacaagc agagagacaa tcgccacttt cacgccgcca
    16081 aaacggtccg gcatccagcc aaacatgacg cgcatcacga caaatgcgcc gccaaacgcg
    16141 gtaagagtaa agcccgccat cgcccatcct ttgctggcaa agtagagcga aacgaaagtc
    16201 ccgataaccg caaaaccaac gccttgtagt gccagcccta accctggttt ccagataagc
    16261 ccgacaacgc tccacagcga tggacgttct cccgccaggg ccggtacttt gcgcactgtg
    16321 ccgttacagg cccacgccag taagggtaat accattgtgg tgatcgccag tgcggcaaaa
    16381 ccgtaatggc tatgaatcaa caggccaagc ggcgcaccaa cagcgagggc accgtaaatc
    16441 gccattccgt tccatgacat cactttgcca gagtgttttg cccctacgat gcctaatccc
    16501 caggtcagag cgcctgtcag taactggctt tcaccaaagc caagaatcaa acgcccgacg
    16561 accaacaggg caaatttcaa cggtgcggag acaggcaaaa tcgccgccag cagcaacgcg
    16621 ccgccagcca gaccacaagc taacatcccc tgaagcgccg aacgttttgc accatattga
    16681 tcggccagtc gcccggcata gccacgcgtc agcaccgtag ccagaaactg aatcccgacg
    16741 gcaatcccga ccatggtatt gccatagccc agatcatgat gaacaaacag cgggataacc
    16801 ggcaacggca gccctacggt catgtaggtg agaaaaaccg caaaagcgat gcggaagagc
    16861 gaaaaattgg cagaagatcg tgtttcggtt tggcttacag cagtcatgca ttactccaga
    16921 atgcagcgca aggcgaggag tatccccgtc tcatctctct ggtttcaggg ttacagtgcg
    16981 ttggcaggat ttaacgcgta cgtcttttca gaaggaaatc gacaaagcgg gaagtttgcc
    17041 tggaactggc ggcgattgtc aatgatgtga aaaagggaac catcaggttc ccttttgcgt
    17101 tagtgccgga ggccgcattg gcgcgtaacg tcggatgcga cgctggcgcg tcttatccga
    17161 cctactccga ctactccgac tactccgact actccgacta ctccgactac tccgacctac
    17221 tgcgaattaa tctttcagct tgcgcattac cagcgtggcg ttggtgccgc cgaagccgaa
    17281 gctgttagac ataacggtgg tcagttcgcg atcggtcgtt tcggtcacga tgttcagacc
    17341 tgccgcctgc tcgtccagct cttcaatgtt gatgctcggg gcgataaagc cgtgttccag
    17401 catcagcaga gagtagatag cttcctgtac gccagcagcg cccagagagt gaccggtcat
    17461 ggctttggtt gcagaaatcg ccgggctctt atcgccgaac acttcacgga tagctgccag
    17521 ttctttcacg tcgccaaccg gagtcgaagt accatgagag ttcaggtaat cgattggggt
    17581 atcaacgccg tgcatcgcca tcttcatgca gcgtactgcg ccttcgccag acggagcaac
    17641 catgtctgca ccatcagagg ttgcgccgta gccaacgatt tcagcataga tgtgagcacc
    17701 acgcgccagc gcgtgttcca gctcttcaac cactaccata ccgccgccgc cagcgataac
    17761 gaaaccgtca cggtgagcgt cgtaagtacg ggaggctttt tccggggtgt cgttgtattt
    17821 agtagacagc gcacccatcg cgtcgaattc gcaggccatt tcccagcaca gctcttcgcc
    17881 gccgccagca aacacgatgt cctgtttgcc cagttggatc tgctctactg cgttaccgat
    17941 acagtgtgcg gaagtcgcac acgcggagct gatggagtag ttaacgccat gaattttaaa
    18001 cggcgtggcg aggcaggcag aaacgccgga tgccatcgct ttggtgacca catacgggcc
    18061 aaccgctttc aggccgcgcg ggccgcgcat tgcgtcagcg ccgaatacct ggaaacgcgg
    18121 ggaaccgccg ccagaacctg caatcaggcc aacgcgcggg ttattctggt aagcttccgg
    18181 agaaaggccc gcatctgcga ttgcctgctc catagaaagg aatgcataaa tggatgcgtc
    18241 gctcataaag cgcacaactt tgcggtcaat gaggccagtg gtatccagtt ttacgttgcc
    18301 ccagacgtgg ctacgcatgc cggaatcctt aagctcctga gagaaagtga tccctgaacg
    18361 tccttcacgc agagatgcca ggacttcctg ctggttatta ccgatgctgg aaacaatgcc
    18421 caggccagta atcactgcac gtttcattca atacctctgt aagtcgcaca tagagtaagt
    18481 ttcgaatgca caatagcgta cacttgtacg ccgaacaagt ccgatcagcc atttaataga
    18541 gaaatttgcg cagccttaca cacatcgcta agatcgagcc accgcctgta agacgagtaa
    18601 cttacgtgaa acactactcc atacaacctg ccaacctcga atttaatgct gagggtacac
    18661 ctgtttcccg agattttgac gatgtctatt tttccaacga taacgggctg gaagagacgc
    18721 gttatgtttt tctgggaggc aaccaattag aggtacgctt tcctgagcat ccacatcctc
    18781 tgtttgtggt agcagagagc ggcttcggca ccggattaaa cttcctgacg ctatggcagg
    18841 catttgatca gtttcgcgaa gcgcatccgc aagcgcaatt acaacgctta catttcatta
    18901 gttttgagaa atttcccctc acccgtgcgg atttagcctt agcgcatcaa cactggccgg
    18961 aactggctcc gtgggcagaa caacttcagg cgcagtggcc aatgcccttg cccggttgcc
    19021 atcgtttatt gctcgatgaa ggccgcgtga cgctggattt atggtttggc gatattaacg
    19081 aactgaccag ccaacaggac gattcgctaa atcaaaaagt agatgcctgg tttctggacg
    19141 gctttgcgcc agcgaaaaac ccggatatgt ggacgcaaaa tctgtttaac gccatggcaa
    19201 ggttggcgcg tccgggcggc acgctggcga catttacgtc tgccggtttt gtccgccgcg
    19261 gtttgcagga cgccggattc acgatgcaaa aacgtaaggg ctttgggcgc aaacgggaaa
    19321 tgctttgcgg ggtgatggaa cagacattac cgctcccctg ctccgcgccg tggtttaacc
    19381 gcacgggcag cagcaaacgg gaagcggcga ttatcggcgg tggtattgcc tgcgcgttgt
    19441 tgtcgctggc gctattacgg cgcggctggc aggtaacgct ttattgcgcg gatgaggccc
    19501 ccgcactggg tgcttccggc aatcgccagg gggcgctgta tccgttatta agcaaacacg
    19561 atgaggcgct aaaccgcttt ttctctaatg cgtttacttt tgctcgtcgg ttttacgacc
    19621 aattacccgt taaatttgat catgactggt gcggcgtcac gcagttaggc tgggatgaga
    19681 aaagccagca taaaatcgca cagatgttgt caatggattt acccgcagaa ctggctgtag
    19741 ccgttgaggc aaatgcggtt gaacaaatta cgggcgttgc gacaaattgc agcggcatta
    19801 cttatccgca aggtggttgg ctgtgcccag cagaactgac ccgtaatgtg ctggaactgg
    19861 cgcaacagca gggtttgcag atttattatc aatatcagtt acagaattta tcccgtaagg
    19921 atgactgttg gttgttgaat tttgcaggag atcagcaagc aacacacagc gtagtggtac
    19981 tggcgaacgg gcatcaaatc agccgattca gccaaacgtc gactctcccg gtgtattcgg
    20041 ttgccgggca ggtcagccat attccgacaa cgccggaatt ggcagagctg aagcaggtgc
    20101 tgtgctatga cggttatctc acgccacaaa atccggcgaa tcaacatcat tgtattggtg
    20161 ccagttatca tcgcggcagc gaagatacgg cgtacagtga ggacgatcag cagcagaatc
    20221 gccagcggtt gattgattgt ttcccgcagg cacagtgggc aaaagaggtt gatgtcagtg
    20281 ataaagaggc gcgctgcggt gtgcgttgtg ccacccgcga tcatctgcca atggtaggca
    20341 atgttcccga ttatgaggca acactcgtgg aatatgcgtc gttggcggag cagaaagatg
    20401 aggcggtaag cgcgccggtt tttgacgatc tctttatgtt tgcggcttta ggttctcgcg
    20461 gtttgtgttc tgccccgctg tgtgccgaga ttctggcggc gcagatgagc gacgaaccga
    20521 ttccgatgga tgccagtacg ctggcggcgt taaacccgaa tcggttatgg gtgcggaaat
    20581 tgttgaaggg taaagcggtt aaggcggggt aatctgctct cgcagtgttt gccggatgcg
    20641 gcgtgaacgc cttatccgac ctacgtgtga cgtgtaggcc tgataagacg cgataagcgt
    20701 cgcatcaggc atggtgctcc agacgccgca acttactgct gtgacgcctg ctgaaacagg
    20761 ttttcccaca tatcggtcac cagcgcctgg tcacgcggcg acaattcacc ggcaccaatg
    20821 gctttttcca gactctggct aacggtcgta tgcaccgcct gagcggagtg gtcatcacca
    20881 ctttccagtt ctgcgatggc taatgtcagg tggccacgca aatacccact ggcaaacaac
    20941 tcatcatcac tggcatggtc aatcatgccg tcgattaatg ccagaatgcg tgattcaaac
    21001 tccgcgatca tcttctttcc tcattgtaaa acgtggcacc ggcttcagtt gagcgcttcc
    21061 ggccacggga actgttccgc cgtaagttcc ggcgtgtgat aataattttg tagtgcttta
    21121 atgaagcgtg ccggacgctc gggaatgcca tttgtcagat aatccatcac ctgcgcatgt
    21181 acccgccgtt gaaacaccac acgatccggt tcgaagtcgc cttccagatt gtcgcaactg
    21241 acgttaaacg gatatcccgc cgccacacag aacaaccagt cgagtgcctg cggcttcact
    21301 tcaacatctt caaactggct ttgcgtttgg gcatcacgcc catccgggca ataccagtag
    21361 ccgaaatcaa ccagctcacg gcgcgctttt ccggcaatac accagtgcga aatctcatga
    21421 attgcgctgg cataaaagcc gtgggcaaag acaattcggt tatacggtac ttccgcatca
    21481 gcaggaagat agatcggttc gtcgtcgcct ttaatcagac gggtattaaa ttcatcggca
    21541 aagcagctat taaaaatttc aatcaactgc tcatagtggt gtgtactgtt cattagttca
    21601 tccccaacca gtggaggatc tcctgtccgt ggctatcgta aagtaatttg gcactcatca
    21661 ccgccgagac gataacgatc atcgggcgga tcagtttttg tcctttgctc agcaccagtc
    21721 ttgaacccat gcgcgcgccg aggaactgcc ccaccagcat gacaaagccc gtcgcccaaa
    21781 tcactttgcc gccgagaata aacagcagca gaccgccaat gtttgacgtt gcgttgagta
    21841 atttggcgtg agccgtggct ttggcgaggt tgaatccgca cagcgtaacg aaggccagcg
    21901 cgtaaaacga tccggcagcc gggccaaaga atccgtcata aaaaccgacg cagccaccgg
    21961 caattaacgc gaagggtaaa ccgtacatcc ggcgctggcg atcttcttca cccagctttg
    22021 gcatcagcaa gaaatagagg ccgatacaaa ttaccagaat gggcaaaatc tgccgtaaga
    22081 catcagcctg aacgtattgc accagcagtg cgccgctcat tgagccggca aaggtcatgg
    22141 cgatattgag tttctgatcg cttaaactaa ccactttgcg gcgaataaag tagatagtgg
    22201 cggaaataga gccgccgcag gcttgcagtt tattggttgc cagcgcgtta gcgggagaca
    22261 ttcccgcagc catcaatgcc ggaatggtga gtaacccacc gccaccggca atcgagtcga
    22321 taaatcccgc cagcatggcg acaaaaaaga gaactcccag caacagcggg gaaaccataa
    22381 acaggctatt aaacgtttcc attagatcac gtgctcatcc agtagcgcct ggcaggaagg
    22441 cggcaacgga ggcggtgtct tcttctcagg ctttgttgtt cctggttttg gaggtgcaaa
    22501 ccagctttgc agttctgccc cgcaaccatc gcctggtggc ggtaaaggtt gatcttcaca
    22561 ctccagacta tcggcagggc aacgtaatcg tacatgcata tgcgcgcgat gctggaacca
    22621 gggtcgcact ttgcgcaacc agtcgcgatc ggtgcccgca tcaaggcaaa gttgttgttt
    22681 aatcgccgga ttaacaaaaa tgcgcgtgac gtctttgtcc tgggcggcga gtttgatcaa
    22741 gctgaaaatt tctggcttcc acagcgtgga gacaacgtgt ttaccgtcgc gggaaactaa
    22801 gtccagtgct tgcgggcgca agagctgcgc ggaggtccag cgagttttcg gcagttgcag
    22861 aaagatatcg acatccagtc cggtctggtg gctggcatga ccgccgttga aacgcccacc
    22921 agcgggcatc cccatatcgc caatcagcac cgtacccatg cccagattgc tcacctggct
    22981 actcagacgc tggataaaca tcaccagatc cgggtgaccg aaatagcgac gctgatcggt
    23041 acgcatgacc tgataatgtt cggactgtat cggcaacgtg tcagcgccga caatacagcc
    23101 attagaaaaa ctgcctatcg attgtgcgct acccggcaca ggttgggtta ttttttgcca
    23161 cggcgtcgct gccaagctag cgctactggc aagcagagcc agcagcgcaa tcgcggtttt
    23221 gttcattttt taccagcgtg gaatatcagt cttcacatcg gcattttgcg cccgctgccg
    23281 taacaggtga tccattaaaa cgatcgccag catcgcttca gcgatcggca ctgcacggat
    23341 cccgacacag ggatcgtgac gacctttggt gatcatctca acttcttcgc caaagcggtt
    23401 aatagtgcgc cccggcacgg taatgctgga ggtcggtttc agcgccatat gagcaatgat
    23461 ttgctgcccg ctgctgatac cgccgagaat gccgcccgca tggttgctct ggaaaccgtc
    23521 tttggtgatt tcgtcgcggt tctggctgcc gcgcagcgcc actacgtcaa agccgtcgcc
    23581 aatttccacg cctttcaccg cgttgatgct catcagcgca tgggcgatgt cggcatccag
    23641 gcggtcaaat accggctcgc caagtccggc ggggacgcca ctggcaacaa cggtgacttt
    23701 cgcgccgatg gagtcgccct cttttttcag cgcgcgcatc agttcatcta acgcgtcgat
    23761 tttgtccgga tccgggcaga agaacggatt ttgttcaacc agcgaccagt ctttgatttc
    23821 cagcggaatg tcgcccatct gggtcaagca gccgcggatt tcaataccaa atttctcggc
    23881 gagatatttt ttggcaatcg cccctgccgc cacgcgcatg gcggtttcgc gggcggaaga
    23941 acgtccaccg ccgcgataat cgcgcagacc gtatttttgt tcgtaggtgt aatcagcatg
    24001 gcctgggcgg aaaacgtctt taattgcgct gtaatcctga gagcgctggt cagtgttttc
    24061 gatcaacaag ccaatgctgg tgccagtagt aacgccttca aaaacaccag agagaatttt
    24121 gacctgatcc ggctcgcggc gctgggtggt atagcgcgat gtcccagggc gacgacgggc
    24181 gaggtcatgt tgcaggtccg cttccgtcag cagaatgcct ggcggaacac catcgacgat
    24241 gcagccgagc gccagcccat gcgattcgcc gaaggtggtt acgcgaaaga gttgtccaat
    24301 tgtgtttcca gccatcacgg ctccgttatt gttgtgtttg cgtgtttact taatctttat
    24361 aaatcgcgaa atattcacgg gccgccagca gctgctcttt ggtgagcata aacacaccat
    24421 cgccgccgtt atcaaactcc agccaggtga acggaacatc cggatattgt tccataagat
    24481 gtaccatgct gttgccgact tcacaaatca acacgccatc atcagcaagg taatctgccg
    24541 cgtttccaag aatgcgacgc gtcagtttaa ggccgtcggt gccagatgcc aggcccagtt
    24601 ccggctcgtg acggtattcg tttggcaggt cggacatatc ttccgcgtcg acatacggcg
    24661 ggttagtgac aatcagatcg tactgcactt tcggcaagtc gcggaacaga tcggaacgaa
    24721 tcggaatgac gttgtggatc agaccgtgtt cttcgatgtt ctgttcagca accgccagcg
    24781 cgtcgggaga gatatccacc gcgtcgactt ctgcatccgg gaaggcataa gcacaggcaa
    24841 tggcgatgca gccgctaccg gtacacatat ctaaaatatg ctgcggttgt ttgctgatga
    24901 gtccggcaaa tttattgttg atcagttcac caatcggcga gcgcggcacc agcacgcgtt
    24961 catcgacgta aaattcatga ccgcagaacc aggctttgtt ggtcaggtaa gccaccggaa
    25021 tgcgctcgtt gacgcggcgg atcacgcgtt caacaatacg atgtttttcg ctggaggtca
    25081 gacgcgcggt gcgcatatct tccgggatat ccagcggcag gtagagcgat ggtaacacca
    25141 gctgtacggc ttcatcccac gggttatcgg tgccgtgacc gtaccagata tttgccgcgc
    25201 tgaagcggct cactgaccag cgcaacatgt cctgaatggt ttgcagctca tttactgctt
    25261 catcaacgaa aattttatcc acgtattcct ccagggcatg atcgcaataa tttcggcggc
    25321 tagtttgcca tgaagatgac gataaatcag cattcacgcg cggtgagtga ggaaaaatac
    25381 gtttaaaacg atcgattgtg ctacgagtcg ggtaaactgt aggaaaatta gaaatagaga
    25441 cagataaatg aaaaagaaaa caacacttag cgaggaggac caggctctgt ttcgccagtt
    25501 gatggcgggg actcgcaaga ttaagcagga cacgattgtc caccgaccgc agcgtaaaaa
    25561 aatcagcgaa gtgccggtga aacgcttgat ccaggagcag gctgatgcca gccattattt
    25621 ctccgatgag tttcagccgt tattaaatac cgaaggtccg gtgaaatatg ttcgcccgga
    25681 tgtcagccat ttcgaggcga agaaactgcg ccgcggcgat tattcaccgg aattgttttt
    25741 ggatttacac ggtctgacgc agctgcaggc caagcaggaa ctgggcgcgt tgattgccgc
    25801 ctgtcgccgc gaacatgtgt tttgtgcctg cgtgatgcat gggcacggga agcatatttt
    25861 gaagcaacaa acaccgctgt ggctggcaca acatccgcat gtgatggcat ttcaccaggc
    25921 accgaaagag tacggcggtg atgcggcttt gttggtgttg attgaagtgg aagagtggtt
    25981 gccgccggag ttgccctgag gagttgagcg tgttgtgcca ggagcgcgga atggcagggg
    26041 cgaatgaccc tgccaggtga gaaaaggtgc gctaatacat attcagtatg taagtgaatc
    26101 ggcaggtaga atctatgggc tgtcgagatg tcgtgtccac gcgtagcttc atatcatgca
    26161 gttgcctgga cgtaatcggt tgcggctcag gcgtcaccgt cactttggca ttatcacagc
    26221 cggaagtcga gaaggtcatc tgctgtgcga taaaacggca gtagacacca cgctcatcaa
    26281 aattatttcc gttacacagt ttgccatttt ccatcaggaa agtgggcagt gtttgctcaa
    26341 taacaccacc tgttgactgc aacctgacga ctttgttatg tacaacataa ttttcattcc
    26401 aggaaacatc atacggtgcc aggggcaccg ccggacatga agaactcacc ttcgttgggc
    26461 caatatagtc aggaaaatca tcatcatacg ttttagcgaa gggatctcta ctcttaacaa
    26521 acgacgacac aatccacgga caaccatgta aattcccatc gtaataaaca aacatcttta
    26581 attcattaca tgtccatccc gttttggtct ggctatcata ctgctctaat ccaggacagg
    26641 ctgacatgga taccctgctg tccgaaattt tcgacataga tggttgagta gaactatcgc
    26701 cagtccacga aactaaatcc ggctgtgaat tgggcatgaa tgtagcctta aatatagcgt
    26761 aattaactga atctggcgtc gctataatca gatgaaactc aaactc
//
LOCUS       DADKRT010000039        26396 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.039, whole genome shotgun sequence.
ACCESSION   DADKRT010000039 DADKRT010000000
VERSION     DADKRT010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 26396)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26396)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26396
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.039"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..564)
                     /locus_tag="JQ356_001385"
     CDS             complement(<1..564)
                     /locus_tag="JQ356_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY4621530.1"
                     /translation="MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIF
                     SALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVST
                     SAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARIT
                     AVGGIAVMCLNLVLLLVSITILLLNGGH"
     gene            complement(783..1760)
                     /gene="epmA"
                     /locus_tag="JQ356_001386"
     CDS             complement(783..1760)
                     /gene="epmA"
                     /locus_tag="JQ356_001386"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY4621531.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            2085..3893
                     /gene="frdA"
                     /locus_tag="JQ356_001387"
     CDS             2085..3893
                     /gene="frdA"
                     /locus_tag="JQ356_001387"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY4621532.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRMAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3886..4620
                     /locus_tag="JQ356_001388"
     CDS             3886..4620
                     /locus_tag="JQ356_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY4621533.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4631..5026
                     /gene="frdC"
                     /locus_tag="JQ356_001389"
     CDS             4631..5026
                     /gene="frdC"
                     /locus_tag="JQ356_001389"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY4621534.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            5037..5396
                     /gene="frdD"
                     /locus_tag="JQ356_001390"
     CDS             5037..5396
                     /gene="frdD"
                     /locus_tag="JQ356_001390"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY4621535.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5459..6592
                     /gene="blaEC"
                     /locus_tag="JQ356_001391"
     CDS             5459..6592
                     /gene="blaEC"
                     /locus_tag="JQ356_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY4621536.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6681..7214
                     /locus_tag="JQ356_001392"
     CDS             6681..7214
                     /locus_tag="JQ356_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HAY4621537.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(7211..7528)
                     /locus_tag="JQ356_001393"
     CDS             complement(7211..7528)
                     /locus_tag="JQ356_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY4621538.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7710..7856)
                     /gene="ecnB"
                     /locus_tag="JQ356_001394"
     CDS             complement(7710..7856)
                     /gene="ecnB"
                     /locus_tag="JQ356_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY4621539.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7967..8092)
                     /gene="ecnA"
                     /locus_tag="JQ356_001395"
     CDS             complement(7967..8092)
                     /gene="ecnA"
                     /locus_tag="JQ356_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY4621540.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(8144..8710)
                     /gene="efp"
                     /locus_tag="JQ356_001396"
     CDS             complement(8144..8710)
                     /gene="efp"
                     /locus_tag="JQ356_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY4621541.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8752..9801
                     /gene="epmB"
                     /locus_tag="JQ356_001397"
     CDS             8752..9801
                     /gene="epmB"
                     /locus_tag="JQ356_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY4621542.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            10175..11044
                     /locus_tag="JQ356_001398"
     CDS             10175..11044
                     /locus_tag="JQ356_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621543.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
     gene            complement(11247..11600)
                     /locus_tag="JQ356_001399"
     CDS             complement(11247..11600)
                     /locus_tag="JQ356_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HAY4621544.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
     gene            complement(11738..13384)
                     /gene="groL"
                     /locus_tag="JQ356_001400"
     CDS             complement(11738..13384)
                     /gene="groL"
                     /locus_tag="JQ356_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HAY4621545.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM"
     gene            complement(13428..13721)
                     /locus_tag="JQ356_001401"
     CDS             complement(13428..13721)
                     /locus_tag="JQ356_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004391824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HAY4621546.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            13997..15253
                     /gene="yjeH"
                     /locus_tag="JQ356_001402"
     CDS             13997..15253
                     /gene="yjeH"
                     /locus_tag="JQ356_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HAY4621547.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPCAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRSASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKS
                     LYALIVLAGLWLLLPKRKTPENGIIT"
     gene            complement(15269..15745)
                     /gene="fxsA"
                     /locus_tag="JQ356_001403"
     CDS             complement(15269..15745)
                     /gene="fxsA"
                     /locus_tag="JQ356_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418564.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HAY4621548.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD"
     gene            16082..17518
                     /gene="aspA"
                     /locus_tag="JQ356_001404"
     CDS             16082..17518
                     /gene="aspA"
                     /locus_tag="JQ356_001404"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HAY4621549.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            17636..18937
                     /locus_tag="JQ356_001405"
     CDS             17636..18937
                     /locus_tag="JQ356_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HAY4621550.1"
                     /translation="MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            19053..19391
                     /gene="cutA"
                     /locus_tag="JQ356_001406"
     CDS             19053..19391
                     /gene="cutA"
                     /locus_tag="JQ356_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HAY4621551.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            19367..21064
                     /locus_tag="JQ356_001407"
     CDS             19367..21064
                     /locus_tag="JQ356_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HAY4621552.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNHALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA
                     NITANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            21101..21676
                     /locus_tag="JQ356_001408"
     CDS             21101..21676
                     /locus_tag="JQ356_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY4621553.1"
                     /translation="MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKQLARYQALSECVKNNRYPGCLFIA
                     ACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
     gene            21783..21858
                     /locus_tag="JQ356_001409"
     tRNA            21783..21858
                     /locus_tag="JQ356_001409"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21816..21818,aa:Phe,seq:gaa)
     gene            22035..23225
                     /locus_tag="JQ356_001410"
     CDS             22035..23225
                     /locus_tag="JQ356_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001218738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4621554.1"
                     /translation="MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRI
                     AGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHA
                     LATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGS
                     LEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRK
                     LAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVP
                     LSRQTTDILLQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRH
                     TMSTILHEQGFNSAWIEMQLAHVDKNAIRGTYNHAQYLDGRREMMQWYADYIDSLSRQ
                     ESQG"
     gene            23659..24702
                     /locus_tag="JQ356_001411"
     CDS             23659..24702
                     /locus_tag="JQ356_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HAY4621555.1"
                     /translation="MNDRLRFEVNDNQGRFVFPDIWFGPLLGEFEELLDAYDTDEISE
                     TSYINKLRRLAQQEPDFIDIHAHLAYAFLEQNAPRKALNAALKGLAAGNRLIPESFSG
                     EIIWMHPENRPYLRALYAAILANVHLQRHQDAVMLTDKILAYNPEDNQGARWLLGSEL
                     LRTGDHERAFSVLKKHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEIL
                     CGNLHPFPLAVWHNYSAGPDTAEDYYATYSPLWGQYPEALLFVNWLYNHSSVLHERAE
                     IIKCAEMLMQEDDFEICESILRQQKLLRERIDETLSEEIVQKCRNINGEYVWPWILPF
                     SAAGMKHTSIQHR"
     gene            complement(24846..26393)
                     /locus_tag="JQ356_001412"
     CDS             complement(24846..26393)
                     /locus_tag="JQ356_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001366569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A phosphoethanolamine transferase"
                     /protein_id="HAY4621556.1"
                     /translation="MLSVVVFTLSNILVSSGAHLIYRILFFTLALLIIKAMKSLTLRF
                     ILAFSFTLLTAADISISLYSWCTFGTTFNDGFAISILQTDPDEVIRMFRMYVVYVIAF
                     IILFLLFFCSAINKTSSLPLEKVTVITFLLLITVTLYSSFQFALKKQYQINEVDPYIV
                     ASRFATYTPFFNLNYFALAAKEHQRLMTIADTIPHYDLVITDNNTDVFVLVIGESARA
                     DNMSIYGYSRPTTPELQKQKSRLKLFTQAISGAPYTALAVPLALSVNTVLHHDVRHYP
                     DNIINMANQAGFDTWWLSAQSAFRQNGTAVASIAMRARNRIYVRGYDELLLPHLAEAL
                     NSNPGGRKLIVLHLTGSHEPVCSNWPRDKAVFKPLDTEEVCYDNSIHYTDSLLGQVFA
                     MLETRRASVMYFSDHGLEYDPTKEHAYFHGGIKPSQQAYHVPMFIWYSPALGEHVDRQ
                     TVNSVFSTAYNDYLINAWMGVTRPAQPKTPEEVITRWQGKSVVFDASHNVFDYKVLRK
                     NFNEPLE"
BASE COUNT         6736 a         6692 c         6432 g         6536 t
ORIGIN      
        1 atgcccacca tttaataaca aaatagtaat gcttactaac agcaatacta aattcagaca
       61 cattactgca ataccgccca ccgcagtaat gcgggcaatt ttattaatcc cctttgaagc
      121 aacgacggtg accagaatca tccatgctac tgccagcaga ccaaccacct gcgtaggctc
      181 cagtccggca atacgccagt gctgggtcat gtcgctacca tagaggaatg ttgagaacgg
      241 tacccaaact ttcgcggagg tactcaccat ccagatgata taagaggaaa accacataaa
      301 cgtaccaatg aaggcaaaac gtggtccgac actattattc atccaggaat agataccacc
      361 ttcttctttg cgataagcag ctcccatttc agccatcatt aaggcgaatg gaataaagaa
      421 taacaatgca gaaaatatat aaaagggaat cgcactataa cccattaagt aataagccga
      481 tgggctattg gcaaatccaa atacggaagt aaagatcatc aatatgagtc ctatcagact
      541 catctttttt atcgtgtgag gcatgaaacc atccttcatt tcagcgcgtg tataacacgt
      601 gcccactgaa ctgcactgcg caacattgag caggcagcgt aaaaaccaat acagaattga
      661 tacccggatg atatcaaata tccagtctta aattgtggcc tttaacggaa aaatgaaaac
      721 atatgctaca gaatggcgct tatcacgcca ttcttcgctg ttaattcagt aatttttcag
      781 aattatgccc ggtcaacgct aaaggcgatg acttcagcca gtgtctccgc gcccagcgcc
      841 aacatcacca gacgatcaac acctaatgcc acgccggaac agtcaggcat accgactttc
      901 aaggcttcaa tcagattctg gtcaatgggg tgctgcggca aaccgcgcgc cgcgcgctta
      961 cggttatctt gttcaaagcg ttgttgctgc tcacgggcat ccgttaattc atggaaacca
     1021 ttcgccagct caataccttt ataataaacc tcaaagcgtt cagcgacccg atgatcttcg
     1081 gtactgattt gcgccagtga tgcctggctg gctggaaagt ggtacacaaa ggtcggtttt
     1141 tctttgccaa tatttggctc tacgccaaag gtaaacagca attgtagcaa cgtgtcgcgg
     1201 tcttcttcgg tatcagcaac gttactcaaa tccagtttcg ctgcgacttc ccgcagttgc
     1261 gttttgtcgg cagagagcgg gtcaatttcc agataacgca agaaagcttg ttgataagaa
     1321 aggctttctg ctgccgggca gtccagcacc tgttgtaaga gatcgtccac ctcgttcatc
     1381 aaccggtaca tatcatagtg cggtcgatac cactcaagca tagtgaactc agggttgtga
     1441 taacgcccca tctcttcatt acggaagctg cggcacagct ggaataccgg cccacaaccg
     1501 gcaaccagca ggcgtttcat atggtattcc gggctggtca ttaaccagag attcatcccc
     1561 tgcgaatgcc cggggccaac gaaacgtgtc tcaaacggga ccaaatgaat atcggttacc
     1621 gtcgcctggc tcatacaagg cgtctccacc tccagcactc cacgatcagc aaagaaacga
     1681 cggatctccg ccataatcgc cgcgcgtttt aataagttag gaatggatgc gctcggctgc
     1741 caggatgccg tttcgctcat agttaaatct ccagtttttg acaagggcac gaagtctact
     1801 cgcaacgcga cggcgagaca aattttacgc aggaatcaaa cagcggtggg cagtgactaa
     1861 aaaaagcacg atctgatggt ttagtaatta aattaatcat cttcagtgat aatttagccc
     1921 tcttgcgcac taaaaaaatc gatctcgtca aatttcagac ttatccatca gactatactg
     1981 ttgtacctat aaaggagcag tggaatagcg ttcgcagacc gtaactttca ggcacttacc
     2041 ctgaagtacg gggctgtggg ataaaaacaa tctggaggaa tgtcgtgcaa acctttcaag
     2101 ccgatcttgc cattgtaggc gccggtggcg cgggattacg tgctgcaatt gctgccgcgc
     2161 aggcaaatcc aaatgcaaaa atcgcactaa tctcaaaagt atacccgatg cgtagccata
     2221 ccgttgctgc agaagggggc tccgccgctg tcgcgcagga tcatgacagc ttcgaatatc
     2281 actttcacga tacagtagcg ggtggcgact ggttgtgtga gcaggatgtc gtggattatt
     2341 tcgtccacca ctgcccaacc gaaatgaccc aactggaact gtgggggtgc ccatggagcc
     2401 gtcgcccgga tggtagcgtc aacgtacgtc gcttcggcgg catgaaaatc gagcgcacct
     2461 ggttcgccgc cgataagacc ggcttccata tgctgcacac gctgttccag acctctctgc
     2521 aattcccgca gatccagcgt tttgacgaac atttcgtgct ggatattctg gttgatgatg
     2581 gtcatgttcg cggcctggta gcaatgaaca tgatggaagg cacgctggtg cagatccgtg
     2641 ctaacgcggt cgttatggct actggcggtg cgggtcgcgt ttatcgttac aacaccaacg
     2701 gcggcatcgt taccggtgac ggtatgggta tggcgctaag ccacggcgtt ccgctgcgtg
     2761 acatggaatt cgttcagtat cacccaaccg gtctgccagg ttccggtatc ctgatgaccg
     2821 aaggctgccg tggtgaaggc ggtattctgg tcaacaaaaa tggctaccgt tatctgcaag
     2881 attacggcat gggcccggaa actccgctgg gcgagccgaa aaacaaatat atggaactgg
     2941 gtccacgcga caaagtttct caggccttct ggcacgaatg gcgtaaaggc aacaccatct
     3001 ccacgccgcg tggcgatgtg gtttatctcg acttgcgtca cctcggcgag aaaaaactgc
     3061 atgaacgtct gccgttcatc tgcgaactgg cgaaagcgta cgttggcgtc gatccggtta
     3121 aagaaccgat tccggtacgt ccgaccgcac actacaccat gggcggtatc gaaaccgatc
     3181 agaactgtga aacccgcatt aaaggtctgt tcgccgtggg tgaatgttcc tctgttggtc
     3241 tgcacggtgc aaaccgtctg ggctccaact ccctggcgga actggtggtc ttcggccgta
     3301 tggccggtga acaagcgaca gagcgtgcag caactgccgg taatggcaac gaagaggcaa
     3361 ttgaagcgca ggcagctggc gttgaacaac gtctgaaaga tctggttaac caggatggcg
     3421 gcgaaaactg ggcgaagatc cgcgacgaaa tgggcctagc aatggaagaa ggttgcggta
     3481 tctaccgtac gccggaactg atgcagaaaa ccatcgacaa gctggcagag ctgcaggaac
     3541 gcttcaagcg cgtgcgcatc accgacacct ccagcgtgtt caacaccgac ctgctctaca
     3601 ccattgaact gggccacggt ctgaacgttg ctgaatgtat ggcgcactcc gcaatggcac
     3661 gtaaagagtc ccgcggcgca caccagcgtc tggacgaagg ttgcaccgag cgtgacgacg
     3721 tcaacttcct caaacacacc ctcgccttcc gcgatgctga tggcacgact cgcctggagt
     3781 acagcgacgt gaagattact acgctgccgc cagctaaacg cgtttacggt ggcgaagcgg
     3841 atgcagccga taaggcggaa gcagccaata agaaggagaa ggcgaatggc tgagatgaaa
     3901 aacctgaaaa ttgaggtggt gcgctataac ccggaagtcg ataccgcacc gcatagcgca
     3961 ttctatgaag tgccttatga cgcaactacc tcattactgg atgcgctggg ctacatcaaa
     4021 gacaacctgg caccggacct gagttaccgc tggtcctgcc gtatggcgat ttgtggttcc
     4081 tgcggcatga tggttaacaa cgtgccaaaa ctggcatgta aaaccttcct gcgtgattac
     4141 accgacggta tgaaggttga agcgttagct aacttcccga ttgaacgcga tctggtggtc
     4201 gatatgaccc acttcatcga aagtctggaa gcgatcaaac cgtacatcat cggcaactcc
     4261 cgcaccgcgg atcagggtac taacatccag accccggcgc agatggcaaa gtatcaccag
     4321 ttctccggtt gcatcaactg tggtctgtgc tacgccgcgt gcccgcagtt tggcctgaac
     4381 ccagagttca tcggtccggc tgccattacg ctggcgcatc gttataacga agatagccgc
     4441 gaccacggta agaaggagcg tatggcgcag ttgaacagcc agaacggcgt atggagctgt
     4501 actttcgtgg gctattgctc cgaagtctgc ccgaaacacg tcgatccggc tgcggccatt
     4561 cagcagggca aagtagaaag ttcgaaagac tttcttatcg cgaccctgaa accacgctaa
     4621 ggagtgcaac atgacgacta aacgtaaacc gtatgtacgg ccaatgacgt ccacctggtg
     4681 gaaaaaattg ccgttttatc gcttttacat gctgcgcgaa ggcacggcgg ttccggctgt
     4741 gtggttcagc attgaactga ttttcgggct gtttgccctg aaaaatggcc cggacgcctg
     4801 ggcgggattc gtcgactttt tacaaaaccc ggttatcgtg atcattaacc tgatcactct
     4861 ggcggcagct ctgctgcaca ccaaaacctg gtttgaactg gcaccgaaag cggccaatat
     4921 cattgtaaaa gacgaaaaaa tgggaccaga gccaattatc aaaagtctct gggcggtaac
     4981 tgtggttgcc accatcgtaa tcctgtttgt tgccctgtac tggtaaggag cctgagatga
     5041 ttaatccaaa tccaaagcgt tctgacgaac cggtattctg gggcctcttc ggggccggtg
     5101 gtatgtggag cgcaattatt gcgccggtga tgatcctgct ggtgggtatt ctgctgccac
     5161 tggggctgtt tccgggtgat gcgctgagct acgagcgcgt tctggcgttc gcgcagagct
     5221 tcattggtcg cgtattcctg ttcctgatga tcgttctgcc gctgtggtgt ggtttacacc
     5281 gtatgcacca cgcgatgcac gatctgaaaa ttcacgtgcc tgcgggcaaa tgggttttct
     5341 acggtctggc tgctatcctg acagttgtca cgctgattgg tatcgttaca atctaacgta
     5401 tcgccaatgt aaatccggcc cgcctatggc gggccgtttt gtatggaaac cagaccttat
     5461 gttcaaaacg acgctctgcg ccttattaat taccgcctct tgctccacat ttgctgcccc
     5521 tcaacaaatc aacgatattg tgcatcgcac aattaccccg cttatagagc aacaaaagat
     5581 ccccggtatg gcggtggcgg taatttatca gggtaaacct tattacttta cctggggcta
     5641 tgcggacatc gccaaaaagc agcccgtcac acagcaaacg ttgtttgagt taggttcggt
     5701 cagcaaaaca tttacgggcg tgcttggtgg cgatgctatt gctcgagggg aaatcaagtt
     5761 aagcgatccc gcaacaaaat actggcctga acttaccgct aaacagtgga atgggatcac
     5821 actattacat cttgcgacct acaccgctgg cggcctgcca ttgcagatgc cggatgaagt
     5881 gaaatcctca agcgacttgc tgcgcttcta tcaaaactgg cagcctgcat gggctccagg
     5941 aacacaacgt ctgtatgcca actccagtat cggtttgttc ggcgcactgg ctgtgaagcc
     6001 gtctggtttg agttttgagc aggcgatgca aactcgtgtc ttccagccac tcaaactcaa
     6061 ccatacgtgg attaatgtac cgcccgcaga agaaaagaat tacgcctggg gatatcgcga
     6121 aggcaaggca gttcatgttt cgccaggggc gttagatgct gaagcttatg gtgtgaagtc
     6181 gaccattgaa gatatggccc gctgggtgca aagcaattta accccccttg atatcaatga
     6241 gaaaacgctt caacaaggga tacaactggc acaatctcgc tactggcaaa ccggcgatat
     6301 gtatcagggc ctgggctggg aaatgctgga ctggccggtc aatcctgaca gcatcattaa
     6361 cggcagtgac aataaaattg cactggcagc acgcccggta aaagcgatta agcccccaac
     6421 tcctgcagta cgcgcatcat gggtacataa aacgggggcg accggcggat ttggtagcta
     6481 tgtcgcgttt attccagaaa aagagctggg tatcgtgatg ctggctaaca aaaactatcc
     6541 caatccagcg agagtcgccg ccgcctgtca gattctcaac gctctacagt aaaatttcat
     6601 cgggtccgaa ttttcggacc ttttctgcgc ttttccttgc tgtcatctac acttagaaaa
     6661 aaaccagtaa ggaaacattt atgcgcctgc tccctctcgt tgccgcagcg acagctgcat
     6721 ttctggtcgt tgcctgcagt tctcctacgc cgccgcgtgg cgtgacagtg gtgaataatt
     6781 tcgacgctaa acgctatctc ggtacctggt atgagattgc ccgttttgat caccgttttg
     6841 aacgtggact ggaaaaagtc accgcaacat acagtctgcg tgatggcggc ggcctgaatg
     6901 tcatcaataa aggctataac cctgacagag aaatgtggca gcagagtgaa gggaaagcgt
     6961 actttaccgg cgcaccaaca cgcgctgcgc tgaaagtgtc attctttggt cctttctatg
     7021 gcggttataa cgtcattgca cttgatcggg aataccgcca tgcgctggtt tgcggcccgg
     7081 accgcgacta cctgtggata ctctcccgca cgccaaccat ttctgacgaa gtgaaacagg
     7141 agatgctggc agtcgcgacc cgggaagggt ttgatgtcag taagtttatt tgggtacagc
     7201 agcccggtag ttagtgagtg ctgagtttca gaccaataat ccccaatacg attaacgcca
     7261 gactcgccag gcgcatcggg ttagcggact caccgagcag cacaatgccg gtgatagccg
     7321 cgccgactgc gccaataccc gtccacacgg cataagccgt ccctactggt aacgatttca
     7381 tcgcccaggc aagtagcgcc atactgacaa tcatcgccgt cacggtaata acactcggcg
     7441 tcaaacgact aaagccgtgg gtatatttca ggccaacggc ccataccact tccagcagac
     7501 cagcaataac taagataatc caggacatat caggctccgg agaattgggg ccgtccccgg
     7561 tgaaaagacg cgtttgcagg tcgtcctgca aagctgatgg ttgaacggat attttgccag
     7621 gtggcagggg aatttcaact attaccttag tgactatcgc agaaaaaaca aacggcacga
     7681 cacagctgtc gtaccgttat tgcttattgc tattgctgcg ctttcgttgc tgcgccagaa
     7741 atcgcgttac cgccatcaga aatgtcttca ccaacgccac gcgtggtgtt gcaggcagtt
     7801 aatactgttg aaagcaccag aacagaaaag atcgctgcaa ttgtcttctt caccataacg
     7861 tcttcctttt aggtaatgtt atttatgttt gcctatagca aattaataat agacaacatc
     7921 gccaaaaatg acggaaatct gatgattttt cggaagagaa gaaaaattag ctggcagcgc
     7981 gagagatgga gttgccgaga tgtttgatgt cttcgccgaa accgcgagcg gtgttacagc
     8041 ccgtgagcag cgtactggca agcaaaacaa gaacgataag gcgtttcatc atctctgacc
     8101 tgaataagtg atggtgcagc ctgcaggccg caccacaacc gcattacttc acgcgagaga
     8161 cgtattcacc agagcgggta tccactttga tgacttcgcc gatttgtacg aacagcggaa
     8221 ccttaaccac agcgccagta gacagggtag ccggtttgcc gccagtacct gcggtatcac
     8281 ctttcaggcc cggatcggta tcaacgattt ccagttcaac gaagttcggc ggagtaacgg
     8341 agatcggctg accattccac agagttacga tacactctgc ctgatccagc agccatttag
     8401 cgttatcgcc aattgctttt gcatcagcag acagctgctc gaaagtttcg ttgttcatga
     8461 agtgccagaa ctcaccgtcg ttgtacaggt aagtcaggtt catatcgaca acatcagcgc
     8521 cttcagcgga atcagtagat ttgaaggttt tttctacgcg agtaccggtc agcagacgac
     8581 gcagtttaac gcgagcaaat gcctggcctt tacccggttt tacgaattca ctcgcttcaa
     8641 ccgcgtaagg ttcgccgtct aacatgattt taagaccagc acgaaaatcg ttgctatagt
     8701 acgttgccat aaggccctct gaaatttgtt aattggtagc taagccacaa aatggcgcat
     8761 attgtaaccc taaatacccc atccagagaa gattggttaa cgcaacttgc cgatgttgtg
     8821 accgatcctg atgaacttct gcgtcttttg aatatagacg cggacgaaaa actgttggcc
     8881 ggacgcagcg ccaaaaagct gtttgccctg cgtgtgcccc gctcatttat cgatcgcatg
     8941 gagaaaggca atccggacga tcctcttttg cgtcaggtac ttacctcgca agatgagttt
     9001 gtcgtcgcgt ccggattctc caccgaccca ctggaagaac agcacagcgt agtgcctggt
     9061 ttgttgcata aataccacaa ccgggcgctt ttgctggtca aaggcggctg cgcggtaaat
     9121 tgccgctatt gcttccgtcg ccacttcccc tatgccgaaa atcagggcaa caagcgtaac
     9181 tggcagactg cacttgagta tgttgctgcg catccggaac tggacgagat gattttctcc
     9241 ggcggcgatc cgctgatggc gaaagatcac gagctggact ggttgctcac acaactggaa
     9301 gccatcccgc atatcaaacg tctgcggatt cacagccgtc tgccgattgt gatcccggca
     9361 cgcatcacag atgcgctggt tgaacgcttt tcacattcta cgctgcaaat cctgctggtg
     9421 aatcacatca accatgccaa tgagatagat gaaacattcc gtcaggcgat ggctaagttg
     9481 cgccgggtag gcgttacttt gctgaaccag agcgttctgt tacgtgatgt gaacgataac
     9541 gcacaaacgc tggcaaacct gagtaatgcg ttgttcgatg ccggcgtgat gccgtattac
     9601 ctgcatgtgc tcgataaagt acagggcgca gcgcatttta tggtgagtga tgacgaagca
     9661 cggcagatta tgcgtgagtt gctgacattg gtgtcgggat atctggtgcc gaaactggcg
     9721 cgagaaattg gcggcgaacc cagcaaaacg ccgctggatc tccagctacg ccagcagtta
     9781 ctgattaaac agggaagtta aacattaaaa ttgcctgatg cgctacgctt atcaggccta
     9841 catcgtgcat tgaaattgaa tggatttgca atgaactgta ggccggataa ggcgtttacg
     9901 ccgcatccgg caagagcaac aaacgcaagt acagcaacct gtcattaaac tgagaaattt
     9961 aatctttgcc cgttgcataa cctttaatta ttcatatgca ttgctgttgt tactttttat
    10021 atagctaaca ccaataatta acctttcttt tctgtttata tagagtgagc acggctattt
    10081 atgttatttt aacaactatt actaccaagc ccatttatct ggcttataaa ttaaaattaa
    10141 ttatttaatt gagaaatggt tagggagaac ctacatggcc ataagcatca agggtgttaa
    10201 taccggtgtt attcgcaaga gtaataattt cattgcactg gcgctgaaaa ttaaagaacc
    10261 tcgcaataaa gaatcgttgt tctttatgtc tgtcatggaa ctgcgcgacc tgctgattgc
    10321 gctggaaagt cgtctgcatc aaaagcataa actggatgct gctgcacgcc ttcagtatga
    10381 gcaagctcgc gataaagtca ttaagaaaat ggcagaaaac atcccagaaa ttctggttga
    10441 tgagcttaaa aatgccgata ttaatcgtcg ggttaacacg ctggaactta ccgataatca
    10501 aggcgaaaat cttaccttcg tattaacgct acatgacggt agcaaatgtg agttagtcgt
    10561 caatgagttg cagattgaaa tgctagcgcg agcaatcatt catgcaatta ataatgcgga
    10621 aatgcgtgaa ctggcattac gtattacctc actgttagat ttcctgccgt tatatgacgt
    10681 tgactgccag gaaaatggca atctggaata tgacacctat tcccaaccgg aatggaaaca
    10741 taacttgttc gaccattatc tggcggtgct ttaccgcttt aaagatgaaa gtggcaaaga
    10801 acaatttagc ggcgcagtgg tgaaaacgcg tgaagcaacg ccgggtaaag aagtagaggc
    10861 gatcactcgc cgaatgcttg atttcagccc acgactgaaa aaactcgcgg gtgtgccatg
    10921 tcaggtctat gttcgcaccg tagcggcgaa taacgcccaa ccgctaaccc aggatcaatg
    10981 cttacgcgcg ctgcatcact tacgtgttca atccaccagc aaaactgcac cacaggcgaa
    11041 ataatctcat ctttgctaat gcgaggctgg agccatccag cctgaaatga ctgataacgt
    11101 gatcgttggt catgccggat gcggcgtaaa cgccttatcc ggcctacaaa ttctcaagca
    11161 ttcaatcagt tgcaatgcct gctgtaggcc tgataagcga agcgcatcag gcaataatac
    11221 gtttgtcacc cagcctctgg atcacatcag ttcgggcact tataaacctg accgataatc
    11281 tggctatccg tcgggacaaa actggacaac attccctgcg acgggctgct gatgccataa
    11341 atcacgttac cgcccattgc agccgcctgg ttgcgcagat cgtttgctgc gccgcgcata
    11401 gaaccgccct cttctccgtg ttgcccggaa agccagttgc tttgcttacc tgtcgcagta
    11461 ccaatcagct ggcactctgc gcctggctgc tcgtccacaa tgcgtacact ctgaccggca
    11521 gcactcaatt cgttgctgga gctacaaccc gccatcagta gcgcggcacc gacaatccct
    11581 gctaagtatt ttacgtgcat gttattcccc ataatcaatg agctggacgc cactcgcgtc
    11641 gtccgtgtct gaatcttata ctagaaagat gaccaaaaga aaaaccccca gacatttctg
    11701 cccgggggtt tgtttatttc tgcgaggtgc agggcaatta catcatgccg cccatgccac
    11761 ccatgccgcc cataccgcca gcagcgccta agtcagctgc atcgtttttc ggcaggtcgg
    11821 taaccatgca ctcggtggtg atcatcaggc cagccacaga agccgcgtac tgcagagcag
    11881 aacgggttac tttggttgga tccaagatac ccatgtcgat catgttgccg tattcttcgg
    11941 ttgctgcgtt gtaaccgtag ttgccgtcgc cgcctttaac agtgttagca acaacagacg
    12001 gttcttcgcc gcagttcaat acgatctgac gcagcggagc ttccattgca cgcagtgcaa
    12061 ctttgatacc cacgttctgg tcttcgttct gaccacgcag gtcagccagt ttagacgcta
    12121 cgcggatcag cgcaacacca ccaccagcaa ccacgccttc ttctaccgca gcacgggtcg
    12181 cgtgcagggc atcttcaacg cgtgcttttt tctctttcat ttcaacttcg gtagcagcac
    12241 ctactttgat aactgcaacg ccgcctgcca gtttcgctac gcgctcctgc agtttttcac
    12301 ggtcgtagtc agaagttgct tcttcaatct gctgacggat ctgagcaaca cggccctgga
    12361 ttgcagcttc ttcacccacg ccatcaatga tggtggtggt gtctttgttg atcacaacac
    12421 gtttagcctg acccaggtct tccagggttg ctttttccag ctccataccg atctcttcag
    12481 agattacggt accgccagtc agggttgcga tatcctgcag catagcttta cggcgatcgc
    12541 cgaagcccgg agctttaacc gcagcaactt tcacgatgcc acgcatggtg ttaacaacca
    12601 gagttgccag cgcttcgcct tcaacatctt cagcgatgat cagcagcggt ttacctgctt
    12661 tagcaacggc ttccagaacc ggcagcattt cgcggatgtt ggagattttc ttgtcagcca
    12721 gcaggatgaa cgggctttcc agttctactg cgccagtttc cggcttgttg atgaagtaag
    12781 gagacaggta gccacggtcg aactgcatac cttcaaccac gtccagttcg tcctgcagac
    12841 cggtaccgtc ttcaacggtg ataacgcctt ctttaccgac tttgtccatc gcttcagcga
    12901 tcagtttacc tacggtttcg tcggagttag cggagatggt accaacctga gcaatcgctt
    12961 tagagtcaga gcatggtacg gacagcgctt tcagttcttc aactgcagcg gtaacagctt
    13021 tgtcgatacc acgtttcagg tccatcgggt tcatgcccgc agcaactgct ttcagaccct
    13081 cagtgatgat agcctgagcc agtacggttg cagtggtggt accgtcgcct gcagcgtcgt
    13141 tcgctttaga ggcaacttct ttcaccatct gcgcacccat attttcgaac ttgtcttcca
    13201 gttcgatttc acgagcaacg gaaacaccat ctttggtgat ggtcggtgca ccgaaagatt
    13261 tatccagaac tacgttacgg cctttcggac cgagggtaac tttcactgca tctgccagta
    13321 cgtttacgcc gcgcagcatt ttcacacgag cgtcgttacc gaattttacg tctttagctg
    13381 ccattatctt tattccttaa attcgtatgt tcagtgtcgt gcgaggatta cgcttcaaca
    13441 attgccagaa tgtcgctttc ggacatgatc aacacttctt cattgtcgat cttctcagat
    13501 ttcacaccgt agccatcgtt gaaaataacg atgtcgccaa ctttcacatc cagcggcttc
    13561 acttcgccat tttcaaggat acggccattg ccgacagcca gcacttcgcc gcgggtggat
    13621 ttagccgctg cagagccggt cagaacgatg ccgccagcag atttagtttc aacttcttta
    13681 cgcttgacga tcacgcgatc atgcaatgga cgaatattca ttgataactc tcctttgaga
    13741 aagtccgtat ctgttatggg tgacgccgga gcttacgtgg tttcccggct ggtgaccaga
    13801 gaaatgggga tgaggattcg ccccttcaag ggggaaaaag aaaaaaaatt ctgatcagca
    13861 caaaatcggg tgaaaaccct gattcacctc acatttcatc gcaatttctt catcgccgtc
    13921 ataagcgaat ctgattgtgc taccatcgaa aatctacgca gttgcccaaa atttgggcgc
    13981 aatcggatat caacccatga gtggactcaa acaagaactg gggctggccc agggcattgg
    14041 cctgctatcg acgtcattat taggcaccgg cgtgtttgcc gttcctgcgt tagctgcaca
    14101 ggtagcaggc aataacagcc tgtgggcgtg gcccgttttg attatcttag tgttcccgat
    14161 tgcgattgtg tttgcgattc tgggtcgcca ctatccctgc gcaggcggtg tcgcgcactt
    14221 cgtcggtatg gcgtttggtt cgcggcttga gcgagtcacc ggctggttgt ttttatcggt
    14281 cattcccgtg ggtttgccag ccgcgctaca aattgccgcc gggttcggcc aggcaatgtt
    14341 tggctggcat agctggcaac tgttgttggc agaactcggt acgctggcgc tggtgtggta
    14401 tatcggtact cgcagtgcca gttccagtgc taatctacaa accgttattg ccggacttat
    14461 cgtcgcgctg attgtcgcta tctggtgggc gggcgatatc aaacctgcga atatcccctt
    14521 cccggcacct ggtaatatcg aacttaccgg gttatttgct gcgttatcag tgatgttctg
    14581 gtgttttgtc ggtctggaag catttgccca tcttgcctcg gaatttaaaa atccagagcg
    14641 tgattttcct cgcgcattga tgattggtct gctgctggca ggattagtct actggggctg
    14701 tacggtagtc gtcttacact tcgacgccta tggtgaaaaa atggcggcgg cagcatcgct
    14761 tccaaaaatt gtagtgcaac tgttcggtgt aggagcgtta tggattgcct gcgtgattgg
    14821 ctatctggcc tgctttgcca gtctcaacat ttatatacag agcttcgccc gcctggtctg
    14881 gtcgcaggcg caacataatc ctgaccacta cctggcacgc ctctcttctc gccatatccc
    14941 gaataatgcc ctcaatgcgg tgctcggctg ctgtgtggtg agcactttgg tgattcatgc
    15001 tttagagatc aatctggacg ctcttattat ttatgccaat ggcatcttta ttatgattta
    15061 tctgttatgc atgctggcag gctgtaaatt attgcaagga cgttatcgac tactggcggt
    15121 ggttggcggg ctgttatgcg ttctgttact ggcaatggtc ggctggaaaa gtctctatgc
    15181 gctgatcgtg ctggcggggt tatggctgtt gctgccaaaa cgaaaaacgc cggaaaatgg
    15241 cataatcaca taatccggcg tttcgacatt aatcctggcg atcgtcttta tgatcaaggc
    15301 ggtcgcgctc atcatccttt cgctggtact caccatcaaa agtattaccg ccaccggtcc
    15361 cggcgctaaa accgccgcct ggcatacgag aaaagcgcaa atgcggcatc aacttcactg
    15421 tcagatgctt ttgcaccggc ggtaataaaa gcagaagacc gaggaagtcg gtgaaaaagc
    15481 ccggtaataa aagcagcaaa ccggcaatga tcagcgaaac acttttaatc atctccgccg
    15541 ctgggttttc acccgccgcc attttttgct gcatcagcac gaaattctta aagccctggt
    15601 tacgtaccag tgacatcccg ataactgacg tgaatataac cagcacgagg gtcagcaata
    15661 cccccaatac atgggcaacc tgaataaaga ttgaaatctc aatatagaca taaaggaaaa
    15721 tggcaataaa aggtaaccag cgcaaaggtt tctcctgtaa tagcagccgg taaaacccgg
    15781 ctacctgaat gggttgcgaa tcgcgttcag cttatattgt ggtcattagc aaaatttcaa
    15841 gatgtttgcg caactatttt tggtagtaat cccaaagcgg tgatctattt cacaaattaa
    15901 taattaaggg gtaaaaaccg acacttaaag tgatccagat tacggtagaa atcctcaagc
    15961 agcatatgat ctcgggtatt cggtcgatgc aggggataat cgtcggtcga aaaacattcg
    16021 aaaccacata tattctgtgt gtttaaagca aatcattggc agcttgaaaa agaaggttca
    16081 catgtcaaac aacattcgta tcgaagaaga tctgttgggt accagggaag ttccagctga
    16141 tgcctactat ggtgttcaca ctctgagagc gattgaaaac ttctatatca gcaacaacaa
    16201 aatcagtgat attcctgaat ttgttcgcgg tatggtaatg gttaaaaaag ccgcagctat
    16261 ggcaaacaaa gagctgcaaa ccattcctaa aagtgtagcg aatgccatca ttgccgcatg
    16321 tgatgaagtc ctgaacaacg gaaaatgcat ggatcagttc ccggtagacg tctaccaggg
    16381 cggcgcaggt acttccgtaa acatgaacac caacgaagtg ctggccaata tcggtctgga
    16441 actgatgggt caccagaaag gtgaatatca gtacctgaac ccgaacgacc atgttaacaa
    16501 atgtcagtcc actaacgacg cctacccgac cggtttccgt atcgcagttt actcttccct
    16561 gattaagctg gtagatgcga ttaaccaact gcgtgaaggc tttgaacgta aagctgtcga
    16621 attccaggac atcctgaaaa tgggtcgtac ccagctgcag gacgcagtac cgatgaccct
    16681 cggtcaggaa ttccgcgctt tcagcatcct gctgaaagaa gaagtgaaaa atatccaacg
    16741 taccgctgaa ctgctgctgg aagttaacct tggcgcaaca gcaatcggta ctggtctgaa
    16801 cacgccgaaa gagtactctc cgctggcagt gaaaaaactg gctgaagtca ctggcttccc
    16861 atgcgtaccg gctgaagacc tgatcgaagc gacctctgac tgcggcgctt atgttatggt
    16921 tcacggcgcg ctgaaacgcc tggctgtgaa gatgtccaaa atctgtaacg acctgcgctt
    16981 gctctcttct ggcccacgtg ccggcctgaa cgagatcaac ctgccggaac tgcaggcggg
    17041 ctcttccatc atgccagcta aagtaaaccc ggttgttccg gaagtggtta accaggtatg
    17101 cttcaaagtc atcggtaacg acaccactgt taccatggca gcagaagcag gtcagctgca
    17161 gttgaacgtt atggagccgg tcattggcca ggccatgttc gaatccgttc acattctgac
    17221 caacgcttgc tacaacctgc tggaaaaatg cattaacggc atcactgcta acaaagaagt
    17281 gtgcgaaggt tacgtttaca actctatcgg tatcgttact tacctgaacc cgttcatcgg
    17341 tcaccacaac ggtgacatcg tgggtaaaat ctgtgccgaa accggtaaga gtgtacgtga
    17401 agtcgttctg gaacgcggtc tgttgactga agcggaactt gacgatattt tctccgtaca
    17461 gaatctgatg cacccggctt acaaagcaaa acgctatact gatgaaagcg aacagtaatc
    17521 gtacagggta gtacaaataa agaaggcacg tcagatgacg tgcctttttt cttgtgaaca
    17581 gtaacttaaa aacaacaatc taatatcaac ttgttaaaaa acaaggaagg ctaatatgct
    17641 agttgtagaa ctcatcatag ttttgctggc gatcttcttg ggcgccagat tggggggaat
    17701 aggtattggt tttgcaggcg gattgggggt gctggttctt gccgctattg gcgttaaacc
    17761 cggtaacatc ccgttcgatg tcatttccat tatcatggcg gttatcgccg ctatttctgc
    17821 catgcaggtt gctggcggtc tggactatct ggttcatcag acagaaaagc tgctgcgccg
    17881 taacccgaaa tacatcacga tcctcgcacc tatcgtgacc tatttcctga caatctttgc
    17941 tggtactggc aacatctctc tggcgacact gccagttatc gctgaagttg cgaaggaaca
    18001 aggcgttaaa ccttgccgtc cgctctctac tgcagtggta tccgcgcaga ttgcgatcac
    18061 cgcatcgcca atctcagcgg cagtggttta catgtcttcc gtgatggaag gtcatggcat
    18121 cagctacctc catctgctct ccgtggtcat cccgtccacc ctgctggcgg ttctggtgat
    18181 gtcctttctg gtcactatgc tgttcaactc caaactctct gacgatccga tttatcgcaa
    18241 gcgtctggaa gagggcctgg ttgaactgcg cggtgaaaag cagattgaaa tcaaatccgg
    18301 tgcaaaaacg tccgtctggc tgttcctgct gggcgtagtt ggcgtggtta tctatgcaat
    18361 catcaacagc ccaagcatgg gtctggttga aaaaccgctg atgaacacca ccaacgcaat
    18421 cctgatcatc atgctcagcg ttgcaactct gaccaccgtt atctgtaaag tcgataccga
    18481 caacatcctc aactccagca ccttcaaagc aggtatgagc gcctgtattt gtatcctggg
    18541 tgttgcgtgg ctgggcgata ctttcgtttc caacaacatc gactggatca aagataccgc
    18601 tggtgaagtg attcagggtc atccgtggct gctggccgtc atcttcttct ttgcttctgc
    18661 tctgctgtac tctcaggctg caaccgcaaa agcactgatg ccgatggctc tggcactgaa
    18721 cgtttcaccg ctgaccgctg ttgcttcttt cgctgcggtg tctggtctgt tcattctgcc
    18781 gacctacccg acgctggttg ctgcggtaca gatggatgac acgggtacta cccgtatcgg
    18841 taaattcgtc ttcaaccatc cgttcttcat cccgggtact ctgggtgttg ccctggccgt
    18901 ttgcttcggc ttcgtgctgg gtagcttcat gctgtaatga tcaatcgcgg ggcgttcacg
    18961 ccccgctttc tttcccgccg actaacatcc ttcccccgta cgttgtatag tgacctctct
    19021 cttgcggttc catctgttct tgcgaggtgt ttatgcttga tgaaaaaagt tcgaataccg
    19081 cgtctgtcgt ggtgctatgt acggcaccag atgaagcgac agcccaggat ttagctgcca
    19141 aagtgctggc ggaaaaactg gcggcctgcg cgaccttgat ccccggcgct acctctctct
    19201 attactggga aggtaagctg gagcaagaat acgaagtgca gatgatttta aaaactaccg
    19261 tatctcacca gcaggcactg ctggaatgcc tgaagtctca tcatccatat caaaccccgg
    19321 aacttctggt tttacctgtt acacacggag acacagatta cctctcatgg ctcaacgcat
    19381 ctttacgctg atcctgctac tttgcagcac ttccgttttt gccggattat tcgacgcgcc
    19441 gggacgttca caatttgtcc ccgcggatca agcctttact tttgattttc agcaaaacca
    19501 acatgacctt aatctgacct ggcagatcaa agacggttac tacctctacc gtaaacagat
    19561 ccgcattacg ccggaacacg cgaaaattgc cgacgtgcag ctgccgcaag gcgtctggca
    19621 tgaagatgag ttttacggca aaagcgagat ttaccgcgat cggctgacgc ttcccgtaac
    19681 catcaaccag gcgagtgcgg gagcgacgtt aactgtcacc taccagggct gtgctgatgc
    19741 cggtttctgt tatccgccag aaaccaaaac cgttccgtta agcgaagtgg tcgccaacaa
    19801 cgcagcgtca cagcctgtgt ctgtttcgca gcaagagcag cacaccgcgc aattgccctt
    19861 ttccgcgctc tgggcgttgt tgatcggtat tggtatcgcc tttacgccat gcgtgctgcc
    19921 aatgtaccca ctgatttctg gcatcgtgct gggtggtaaa cagcggctct ccactgccag
    19981 agcattgttg ctgaccttta tttatgtgca ggggatggca ctgacttaca cggcgctggg
    20041 tctggtagtt gccgccgcag ggttacagtt ccaggcggcg ctacagcacc catacgtgct
    20101 cattggcctc gccatcgtct ttaccttgct ggcgatgtca atgtttggct tgtttactct
    20161 acaactcccc tcttcgctgc aaacacgtct cacgttgatg agcaatcgcc aacagggcgg
    20221 ctcacctggc ggtgtgtttg ttatgggggc gattgccgga cttatctgtt caccatgcac
    20281 caccgcaccg cttagcgcga ttctgctgta tatcgcccaa agcgggaaca tgtggctggg
    20341 cggcggcacg ctttatctct atgcgttggg catgggcctg ccgctgatgc taattaccgt
    20401 ctttggtaac cgcttgctgc cgaaaagcgg cccgtggatg gaacaagtca aaaccgcgtt
    20461 tggttttgtg atcctcgcac tgccggtctt cctgctggag cgagtgattg gtgatgtatg
    20521 gggattacgc ttgtggtcgg cgctgggtgt cgcattcttt ggctgggcct ttatcaccag
    20581 cctacaggct aaacgcggct ggatgcgcgt ggtgcaaata atcctgctgg cagcggcatt
    20641 ggttagcgtg cgcccacttc aggattgggc atttggtgcg acgcataccg cgcaaactca
    20701 gacgcatctc aactttacac aaatcaaaac ggtagatgag ttaaatcatg cgctcgttga
    20761 agccaaaggc aaaccggtga tgttagatct ttatgccgac tggtgcgtcg cctgtaaaga
    20821 gtttgagaaa tacaccttca gcgacccgca ggtgcaaaaa gcgttagcag acacggtctt
    20881 acttcaggcc aacatcacgg ccaacgacgc acaagatgtg gcgctgttaa agcatcttaa
    20941 tgtccttggc ctaccgacaa ttctcttttt tgacggacaa ggccaggagc atccacaagc
    21001 acgcgtcacg ggctttatgg atgctgaaac cttcagcgca catttgcgcg atcgccaacc
    21061 gtgaacgaca cttgcagcgg gaaagacgga ggaaaatagc gtgcaacgtg aagatgtact
    21121 gggagaagcc ctgaaattat tagaattaca agggattgcc aacaccacgc tggagatggt
    21181 tgctgaacgt gtggattatc cactggacga gctacgccgc ttctggccag acaaagaggc
    21241 aatcctctac gatgcgctgc gttatcttag ccaacagata gatgtctggc gtcgtcagct
    21301 gatgctggac gaaacgcaaa ccgccgaaca aaagcagctg gcacgttatc aggcgttatc
    21361 ggagtgcgtt aaaaacaacc gctatccggg ctgtctattt atcgctgcct gtacgtttta
    21421 tcccgatcct ggccacccta ttcatcaact ggccgatcag caaaaaagcg cggcctacga
    21481 tttcacccac gaactgttaa ccacactgga agttgacgat ccggcgatgg tagcaaagca
    21541 gatggaactg gtgctggaag gctgtttaag ccgaatgctg gtgaatcgta gccaggcgga
    21601 tgtcgacact gcacatcggc tggcggaaga tatcctgcgc ttcgcccgct gccgccaggg
    21661 tggtgcattg acctgacaga aacacagaaa agaagcgatt tgccgcaatc ttaagcagtt
    21721 gaatcgcttt tactgaaatt aggttgacga gatgtgcaga ttacggttta atgcgccccg
    21781 ttgcccggat agctcagtcg gtagagcagg ggattgaaaa tccccgtgtc cttggttcga
    21841 ttccgagtcc gggcaccact ttcacttcca gattcatctc ccgaactcca cgaaactcaa
    21901 gtataatcac atcgttacaa gcaatctgaa catcctgaac tccaccgaac tctactgaac
    21961 tctctctcaa tcaagcgttc attgggggca ccggtggggg ctcattgtgt tcggtcagtt
    22021 tcaggagccc ccatatggca cttacagcca gacaggtcga aacagccaga cctaaagaaa
    22081 aagactataa actctctgac gaacgtggtt tatatctgct ggtaaaaacc acgggtgccc
    22141 gctactggcg gcttaaatac cggatagcag gaaaagagaa aaaactggcc ctcggcgtct
    22201 atcccgacgt ctcccttgct gaagccagaa tcaaacgcga cgatgcccga aaaattatct
    22261 ccgaaggtgg tgacccgggc gaaaagaagc gaaaggaaaa actcactcag aaaatctctg
    22321 ccaccaatac gttccatgcc ctcgctacgg aatggcacca gcataaatct ttgtcatggt
    22381 ctgaaagtta cgccagaagc gtactggaag cgctggataa agatattttc ccgtatctgg
    22441 gcaaacgaag cgttacggat atcctcccgc tggaaatgct ggaaattctg cgccgcatag
    22501 aaaaacgtgg ctcgctggag aaactgcgta aggtacgcca atactgtaat cagatttttc
    22561 gttatgccat cgccaccgga cgagccactg tcaatccggc atctgaactg accagtacgc
    22621 tggcggcacc aaaagctgca catttccccc acctgagagc agatgagctc cctgtttttc
    22681 tccggaagct cgctgaatat catggcagtc ctgttacccg catggcgaca aatctgctgc
    22741 ttctgacagg cctcagaacg attgaactac ggtccgctga atggtcagaa attgattttg
    22801 ataatgccct gtggacaatc cctgaaagcc gcatgaaaat gcgacgtaaa catgtcgtac
    22861 cactgtcacg acagaccact gacattctgc tgcagctcaa aactttctcc ggacaatacc
    22921 ggctggtttt tccgggacgt tgtgatatca acaagccaat gagcgaagcc agcatcaaca
    22981 tggtgctcaa acgtatcggt tacgatggca gggcaaccgg tcatggtttt cgtcacacca
    23041 tgagtaccat tctgcacgaa cagggcttta attctgcctg gattgaaatg cagttagctc
    23101 atgtggataa aaacgccatc aggggtacct ataatcatgc ccaatatctc gatggtcgcc
    23161 gtgaaatgat gcaatggtac gcagattaca ttgattcgct ttccaggcaa gagagtcagg
    23221 gttaagaaca cttgttctga tattttctct caatccacaa gttctcctcc ggcctccagg
    23281 tccggaggaa ttttgttttc atgctttatt tttagatatt ttttgttttt tgacaaaata
    23341 tttaatattg catctgtaaa caatctcaaa acatcacacc gttatggacc gctaacaatt
    23401 ttgatacctg taatataaat catcatcatg tcgttatttc agcaccattc ccctaaaaaa
    23461 atcgattaat atgctgtttc agccgacaat tcacaataca ccggaatgca gataaagata
    23521 aattttcatt ctcatgaaaa accactgccg atgatattgt aaacaacatt catcccggac
    23581 aaaaacaaga cttgatacac aacatcacaa cttttatgct tttcagattg tgtcccatcc
    23641 gttttacagg ctcagaaaat gaacgacaga ttacgctttg aagtgaacga taaccagggg
    23701 cgtttcgtat ttccggatat ctggtttggc ccattactgg gggagtttga agaactgctc
    23761 gatgcatacg acactgatga aatcagcgag acgagttaca tcaacaaact cagacgcctt
    23821 gctcaacagg agcctgactt tattgatata cacgctcatc tggcatatgc atttctggag
    23881 cagaatgccc cgcgtaaggc actgaacgcc gctcttaaag gactggcggc aggtaatcgt
    23941 ctcatcccgg aaagtttcag tggtgaaatc atctggatgc atcccgaaaa ccggccttat
    24001 ctgcgcgcgc tttatgcagc aattctcgca aatgtgcact tacagcgtca tcaggatgcg
    24061 gttatgctta ctgataaaat actggcatac aatcctgaag ataatcaggg tgcccgctgg
    24121 ttgttgggtt cagagctgtt acgaacaggt gatcatgagc gagccttcag tgtactgaaa
    24181 aaacatgctg atgaattttc accttactgg tatgaacttg gtcttctgca ttttcttaat
    24241 ggggaactgg taaaagctgc aactgcattt cgtcgcggat ttgcggcaaa tacttacatc
    24301 gcagaaattc tgtgcggaaa tctgcatcca tttcctcttg ctgtatggca taactattct
    24361 gccgggccgg atactgccga agattattat gcaacatact caccattatg gggacaatat
    24421 ccggaagcat tgctgtttgt aaactggctc tataaccatt cctctgtgct gcatgaacgg
    24481 gcagaaatca ttaaatgcgc cgaaatgctg atgcaggaag atgatttcga aatatgcgaa
    24541 agcattttaa gacagcagaa gctgttgcgg gaaagaattg atgagacact ttctgaggaa
    24601 attgtacaga aatgcagaaa tattaacggt gaatatgtct ggccctggat attgccgttt
    24661 tcagcggcag gaatgaaaca cacaagcatc cagcatcggt agatattgca ttagtgtatc
    24721 tttcaaacaa gtaataaatt atccaccagt aataacacag ccccccactt ccccaggtta
    24781 tcgccctggg gttattttct gaaagtttcc tttgaaaaaa tagcgtagta aattacttta
    24841 acgaattatt ccaggggttc attaaagttc tttcgtaata ctttgtagtc aaacacgtta
    24901 tggctggcat caaaaaccac ggattttccc tgccagcggg taatcacctc ctccggcgtt
    24961 ttcggttgag ccggtctggt tacgcccatc catgcattaa tcagataatc attatacgca
    25021 gtggaaaaaa cgctgttcac cgtctggcga tcgacatgct ctcccagcgc cgggctgtac
    25081 cagataaaca tcggaacatg ataagcctgc tggctgggtt ttattccacc atgaaaatag
    25141 gcatgttctt ttgtcgggtc atactccaga ccgtgatctg aaaaatacat gacggatgcc
    25201 cggcgcgttt ccagcatggc gaaaacctgc cccaacaaac tgtcggtata atgaatggaa
    25261 ttatcgtaac agacttcttc tgtatccagc ggtttaaaca cggctttatc tctgggccag
    25321 ttactgcaaa ccggttcatg gctgcccgtc agatgcagaa caatcagttt cctgcctccc
    25381 ggattactgt tcagtgcttc agccaggtgt gggagcagta actcatcata gcctctgaca
    25441 taaattctgt ttctggcccg catggcaata ctggccacag ctgttccgtt ctgccggaac
    25501 gccgattgtg cgctgagcca ccaggtatcg aatcccgcct gattcgccat gttgataata
    25561 ttatcgggat aatggcgaac atcatgatgc agcacggtat ttacagataa tgccagcggt
    25621 accgcaaggg cggtataagg cgccccgctg attgcctgag tgaacagttt cagtcgtgat
    25681 ttctgtttct gaagctctgg tgtggttggg cgcgaatacc cgtaaatgga catgttatca
    25741 gcccttgcag attcaccaat caccagaaca aatacgtcag tgttgttatc cgtaatcacc
    25801 agatcgtagt gaggtatggt atcagcaatc gtcattaatc tctgatgctc ctttgcggcc
    25861 agtgcaaaat agttcagatt aaagaaaggg gtatatgtgg caaaccggga agcgactatg
    25921 taaggatcaa cttcatttat ttgatactgt ttcttcaacg caaactggaa ggaagaatat
    25981 aacgttactg taattaacaa taaaaatgta attaccgtga ccttttccaa tggcaatgag
    26041 gacgttttat ttattgctga acagaagaac aataaaaaga ggataataaa tgcgataaca
    26101 taaacaacat acatcctgaa cattcttatt acttcatcag gatctgtctg aaggatactg
    26161 attgcaaaac catcattaaa tgttgtaccg aatgtacacc atgaatacaa actgatactg
    26221 atatctgccg ctgtcagcaa tgtgaacgaa aaggcaagaa taaaacgcag cgtaagcgat
    26281 ttcatcgcct taataataag aagcgccagg gtgaagaata atatccggta aatcagatgc
    26341 gctcctgagg atacaaggat attagaaagg gtaaagacaa ccactgataa cacgag
//
LOCUS       DADKRT010000040        25805 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.040, whole genome shotgun sequence.
ACCESSION   DADKRT010000040 DADKRT010000000
VERSION     DADKRT010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25805
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.040"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(82..2301)
                     /locus_tag="JQ356_001413"
     CDS             complement(82..2301)
                     /locus_tag="JQ356_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HAY4621557.1"
                     /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
                     DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
                     VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYKRVLHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
                     KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
                     FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYK
                     SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
                     EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
     gene            complement(2412..3824)
                     /gene="ftsP"
                     /locus_tag="JQ356_001414"
     CDS             complement(2412..3824)
                     /gene="ftsP"
                     /locus_tag="JQ356_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HAY4621558.1"
                     /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
                     GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
                     VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
                     WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
                     SPYVEVSRGWVRLRLLNASNSRRYQLQMSDSRPLHVISGDQGFLPAPVSVKQLSLAPG
                     ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
                     SLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE
                     PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
                     QTLEMADRGSIGQLLVNPVP"
     gene            complement(3899..4636)
                     /gene="plsC"
                     /locus_tag="JQ356_001415"
                     /gene_synonym="parF"
     CDS             complement(3899..4636)
                     /gene="plsC"
                     /locus_tag="JQ356_001415"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HAY4621559.1"
                     /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP
                     FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
                     AHCRSIMEQKIAELDKEVAEREAAGKV"
     gene            complement(4869..7127)
                     /gene="parC"
                     /locus_tag="JQ356_001416"
     CDS             complement(4869..7127)
                     /gene="parC"
                     /locus_tag="JQ356_001416"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001639862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HAY4621560.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
                     AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
                     LVSERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSLMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
                     PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG
                     EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
                     SPRRASSGDSEE"
     gene            complement(7673..8155)
                     /locus_tag="JQ356_001417"
     CDS             complement(7673..8155)
                     /locus_tag="JQ356_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY4621561.1"
                     /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
                     GLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
                     RHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
                     "
     gene            complement(8208..8600)
                     /gene="ygiW"
                     /locus_tag="JQ356_001418"
     CDS             complement(8208..8600)
                     /gene="ygiW"
                     /locus_tag="JQ356_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB fold stress tolerance protein YgiW"
                     /protein_id="HAY4621562.1"
                     /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG
                     SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            8752..9411
                     /gene="qseB"
                     /locus_tag="JQ356_001419"
     CDS             8752..9411
                     /gene="qseB"
                     /locus_tag="JQ356_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HAY4621563.1"
                     /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKP
                     FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLASEPLTLKPKEFALLEL
                     LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
                     K"
     gene            9408..10757
                     /gene="qseC"
                     /locus_tag="JQ356_001420"
     CDS             9408..10757
                     /gene="qseC"
                     /locus_tag="JQ356_001420"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HAY4621564.1"
                     /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
                     DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDG
                     DNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV
                     AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRP
                     LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
                     LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
                     VRLTLNVQGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGV
                     TPEALARIGERFYRPSGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW"
     gene            10867..11448
                     /gene="mdaB"
                     /locus_tag="JQ356_001421"
     CDS             10867..11448
                     /gene="mdaB"
                     /locus_tag="JQ356_001421"
                     /EC_number="1.6.5.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase MdaB"
                     /protein_id="HAY4621565.1"
                     /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
                     DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
                     DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM
                     EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG"
     gene            11479..11793
                     /locus_tag="JQ356_001422"
     CDS             11479..11793
                     /locus_tag="JQ356_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY4621566.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
                     DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
                     GI"
     gene            complement(11841..13733)
                     /gene="parE"
                     /locus_tag="JQ356_001423"
     CDS             complement(11841..13733)
                     /gene="parE"
                     /locus_tag="JQ356_001423"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HAY4621567.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQIYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
                     LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
                     HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
                     MAEIEV"
     gene            complement(13762..14343)
                     /gene="yqiA"
                     /locus_tag="JQ356_001424"
     CDS             complement(13762..14343)
                     /gene="yqiA"
                     /locus_tag="JQ356_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HAY4621568.1"
                     /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
                     SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
     gene            complement(14343..15170)
                     /gene="cpdA"
                     /locus_tag="JQ356_001425"
     CDS             complement(14343..15170)
                     /gene="cpdA"
                     /locus_tag="JQ356_001425"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HAY4621569.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA
                     VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
                     ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
     gene            complement(15195..15617)
                     /locus_tag="JQ356_001426"
     CDS             complement(15195..15617)
                     /locus_tag="JQ356_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HAY4621570.1"
                     /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
                     YRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
     gene            complement(15618..16247)
                     /gene="nudF"
                     /locus_tag="JQ356_001427"
     CDS             complement(15618..16247)
                     /gene="nudF"
                     /locus_tag="JQ356_001427"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HAY4621571.1"
                     /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHSLFNGQ
                     MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
                     ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA"
     gene            16452..17933
                     /gene="tolC"
                     /locus_tag="JQ356_001428"
     CDS             16452..17933
                     /gene="tolC"
                     /locus_tag="JQ356_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HAY4621572.1"
                     /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
                     DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSK
                     WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
                     QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
                     NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST
                     GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
                     SEQLESAHRSIVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
                     DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
                     NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
     gene            18081..18752
                     /locus_tag="JQ356_001429"
     CDS             18081..18752
                     /locus_tag="JQ356_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HAY4621573.1"
                     /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLASCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS
                     RSMGG"
     gene            18758..19918
                     /locus_tag="JQ356_001430"
     CDS             18758..19918
                     /locus_tag="JQ356_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY4621574.1"
                     /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLPLAQ
                     VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
                     LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
                     RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQ
                     FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
                     VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE"
     gene            complement(19956..20771)
                     /gene="ygiD"
                     /locus_tag="JQ356_001431"
     CDS             complement(19956..20771)
                     /gene="ygiD"
                     /locus_tag="JQ356_001431"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HAY4621575.1"
                     /translation="MTPLVKDIIMSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMT
                     LPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLV
                     ELLAPVPVTLDKEARGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLA
                     ALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWAMSFNEYVKANLTWQGAVEQHPLVN
                     YLDHEGGALSNPTPEHYLPLLYVLGAWDGQEPITIPVDGIEMGSLSMLSVQIG"
     gene            20887..21648
                     /gene="zupT"
                     /locus_tag="JQ356_001432"
     CDS             20887..21648
                     /gene="zupT"
                     /locus_tag="JQ356_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HAY4621576.1"
                     /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
                     LLISLMEMLPAALAAEGISPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP
                     KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAVAGIMVALSVDELMP
                     LAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
     gene            complement(21706..21876)
                     /locus_tag="JQ356_001433"
     CDS             complement(21706..21876)
                     /locus_tag="JQ356_001433"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621577.1"
                     /translation="MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYL
                     NSTREETAEKVE"
     gene            complement(22136..22789)
                     /gene="ribB"
                     /locus_tag="JQ356_001434"
     CDS             complement(22136..22789)
                     /gene="ribB"
                     /locus_tag="JQ356_001434"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HAY4621578.1"
                     /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
     regulatory      complement(22893..23041)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            23163..23453
                     /locus_tag="JQ356_001435"
     CDS             23163..23453
                     /locus_tag="JQ356_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HAY4621579.1"
                     /translation="MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRL
                     DLVSREEFDVQTQVLLRTREKLALLEQRMSELENRSTEIKKQPDPETLPPTL"
     gene            23737..24288
                     /locus_tag="JQ356_001436"
     CDS             23737..24288
                     /locus_tag="JQ356_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein"
                     /protein_id="HAY4621580.1"
                     /translation="MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIK
                     PGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTM
                     TGQTDLLKNTKETEIGGATGVGVRILNSQSGEVTLGTPVVITFNNTNSYQELNFKVRM
                     ESPGKDATPGNVYAQADYKIAYE"
     gene            24348..>25805
                     /locus_tag="JQ356_001437"
     CDS             24348..>25805
                     /locus_tag="JQ356_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY4621581.1"
                     /translation="MYKKLKLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAE
                     DRENVNLSQFETDGQLPVGKYSLNAIINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTL
                     LGFTDEIIEEAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPP
                     ELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFN
                     NGKSQANNLDFPRIYLFRPIPAINAKLTIGQYDTESSIFDSFHFSGVSLKSDENMLPP
                     DLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEE
                     DGQVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNV
                     SLHGGSVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDTQLHNQDKETGYSYRANYSK
                     RFESTGSQLTFAGYRFSDKNFVTMNEYINDTNHYTN"
BASE COUNT         6461 a         6801 c         6373 g         6170 t
ORIGIN      
        1 tcggcatata aataaatgcc taatgagata gattctgatg taatatcccc ggtagcaatt
       61 ctgctaccgg gaacagcgaa tttaacgtcc aaccgccgct ttaggccgtt tcttcgcacc
      121 agcattcacc ggacgagatt gcgtagacga cgcttttttt gccgtagcag gcgtctgacg
      181 ctgggtcgcc atcggcgtat gtttcgtcaa cgccggacgg gtattgcggt tctggcgacg
      241 agcttcacgc atctcttcaa tggttggcgc aggcactaag caatcgcgac ggctaccaat
      301 cagatgcttt ttacccatcg cttccagcgc ctggcggatt aacggccagt ttgccggatc
      361 gtggtaacgc aacaacgctt tatgcaaacg acgctgcttg tcgcccttcg gtacgaagac
      421 gtcttcactc ttataaccaa tcttcgccag cggttttttc ccggtgtaat acatggtggt
      481 tgagttcgcc agcggcgatg ggtagaagtt ctgtacctgg tcgagacgga aacgatgctt
      541 tttcagccac agcgccagat tcaccatatc ttcatcacgc gtaccggggt gcgcggagat
      601 gaaatagggg atcagatact gctctttacc tgcctgtttt gagtaagtat cgaacagctc
      661 tttaaagcgg tcatagctgc ccatgcccgg cttcatcatc ttcgataacg gcccttcttc
      721 ggtatgttcc ggggcaatct tcagataacc gccgacgtga tgggtcgcca gttctttgat
      781 atagcgcgga tcttccacgg cgatgtcata acgcacacca gaggcaatca ggatcttttt
      841 aatgcctttc agatcacgcg cacggcgata gaggttgatc gttggttcgt ggttcgtgtc
      901 catgtgcgga caaatatccg gataaacgca cgacaaacgg cggcaggttt gctcagcgcg
      961 tggcgatttg cagcgcaaca tatacatgtt ggcagttggc ccaccgagat cggaaattac
     1021 gcccgtaaaa cctggaacgg tgtcgcggat cgcttcgatc tcattaatga tcgaatcttc
     1081 ggaacggctc tgaataatgc gcccttcgtg ctcggtgata gaacagaaag agcagccgcc
     1141 aaagcagcca cgcataatgt tgaccgaaaa acggatcatt tcgtaagccg gaatacggac
     1201 attgccatag gccggatgta gcacgcgctt gtatggcagc gcaaaaacgc tgtccatctc
     1261 ttcggtagaa agcggaatag caggcgggtt gatccacaca tagcggtcgc cgtgtttttg
     1321 catcaatgcg cgggcacagc ctgggttggt ttcgtggtgc agaatacgcg aagcatgggc
     1381 gtacagcact ttatcgccct tcactttctc gaaagaaggc agcaacacgt aggttttttc
     1441 ccacggtttc gggcgcggtg gctgcacggt tacggctttg gcttcctgct ttttcggtgc
     1501 caccggtttg ttatccgcgc acggcaaatc ttcaccatac ggatgcggga ttgggtcgat
     1561 ttttccaggg gtatcaagac gggtggaatc cacgccgctc cagccaggca gggcctcttt
     1621 cacgataatc gcggtattac gcacatcgcg gatttcacta atcggctcgc ccatcgccag
     1681 acggtgcgcc acctccacca gcggacgctc accgttacca aacatcagca tgtcggcttt
     1741 cgaatccacc agcacggaac ggcgcacggt atcggaccag taatcataat gtgcggtacg
     1801 acgcagacta gcctcaatac cgccgaggat caccggtaca tctttccacg cctctttaca
     1861 acgctgggta taaaccagtg tggcgcgatc cgggcgctta cccgcgacgt tatccggcgt
     1921 gtaggcatcg tcatgacgta aacggcgatc ggcggtataa cggttgatca tcgaatccat
     1981 gttgccagca gtaacaccga aaaacagatt cggtttaccc agacgcataa agtcgtcttt
     2041 gctgctccag tccggctggg cgatgatccc gacgcgaaag ccctgcgctt ccagcatacg
     2101 accgcaaatc gccatcccga agcttgggtg atcgacatac gcgtcgccag taaccaaaat
     2161 gatgtcgcag ctatcccagc caagttgatc catctcttca ctagacatcg gcaaaaacgg
     2221 tgccggtcca aaacaggcgg cccagtactg cggccaggag aacaggtcgc gatccggttg
     2281 gatcagggag atagagctca ttttgcttcc agaaatgata aaaaaataat caaaggccgg
     2341 ggattataag ccggaacgaa agagaaatcg aaaagtattc catactcgcc ctcctcgggc
     2401 gagtatgaag attacggtac cggattgact aacagttgcc caatcgagcc acggtccgcc
     2461 atttccagcg tctgactgtt gaagtagaac gggaagtgcg cccaggaagg ctgaccgaaa
     2521 taaacaagca gctccacttg tccgtcaacc caaacggtat ctttccagcc tctgtcttcc
     2581 gggaacggca tcgcaccatt cacgttacgg atctggaaca tcacgccttc aatatggaac
     2641 gcttgcggct cgtccgcgcg taccgtccag cgttcccacg ttccttgctg cgcggtgaca
     2701 tcaatacggt tgacgtccca cagttgtcca ttaatacccg ggtcatcacc cagactgata
     2761 tcgcgactgc gaatcggcga accggccatg atttcagttg gcagcaagcg catcggaaga
     2821 ctgtctgtga ccagcggcag aaggccggtt gggcgcagcg ttagcaccag ggtagaaacc
     2881 agaatgctgg atggctcaaa gaagccacga atacgatcaa caatgctcgc cgcttcgcca
     2941 caggtgatcg acacttcatc accgttgctc atatccacca gaatctcgcg gcgctcgccc
     3001 ggtgccaacg aaagttgctt caccgataca ggagcaggca ggaatccctg atcgccagaa
     3061 atcacatgta acgggcgact atcgctcatc tgtagttgat agcgacgaga gttcgacgcg
     3121 ttcagcagtc gcaagcgcac ccagccacgc gagacttcaa cgtacgggct ttgtacaccg
     3181 ttaaccagca gcgtatcacc aacaaagccg ccgcttcccg gttcgttgta ttctggcgta
     3241 ccaaagttat ccagccgttt atcctggata atgaccggaa aatcatccac accataatgg
     3301 ttggggatag gcagcgactt gctgacttca tcttccacca gccacattcc ggcaaggccg
     3361 ttatagacct gctgagccgt gcggttggga gtattggcgt gataccacag agtagctgcg
     3421 ttctggcgaa tgggcagtac gggtgcccag tcagcgtttg gcgacatcat ccgtgccgga
     3481 ccgcccatca gcgggcctgg tacctgtagc ccggccaccg tcattgagac attttctgtc
     3541 aggcggttgc tgtaaataag cttaacatcg tcgcccttcc agacgcggat agtcggcccc
     3601 aggtaacgac cattgattcc ccagaccgac gcgcgtgtcc ctggcgtaaa tgaccagtgc
     3661 gcacgttgta cagtcataaa cagcggttgc ccacggcgag attcaagtag cggcggaacg
     3721 ggtagcggtt gctgttgccc ggctgcgctg gccttcaggg gaacagcgcc ggcacaaagt
     3781 gcaatccccg atgcctgaat gaactgacgc cgactgagtg acatatttgc tccatgtaaa
     3841 actggctaaa gtaataccgt gcaggaaagt gttccccgca aaaatacaga ttgccgactt
     3901 aaacttttcc ggcggcttcg cgttctgcga cttctttatc gagctcggcg attttttgtt
     3961 ccattatcga acgacaatgg gcagccagct cacgaacctg atctttgcca tactgactga
     4021 cgtcaattgg cggcagcatt tcgacaatca ccagaccgtt gtgcagtcga ttaagattaa
     4081 tcttattcga agttgtagag acgcacacgg gaataatcgg gacgcccgcc gcaattgccg
     4141 cgtgaaatgc tccagtcttg aacggtagca ggccgcgacc acggctgcgg gttccttccg
     4201 ggaacatcca gatggaaata cggcgttttt tgaaatgatt cacgacttcc gcaatggtgc
     4261 cgtgagcttt agtgcgattg tttctgtcga tcaataagtt gccggttaac cagtacaact
     4321 gcccgaagaa ggggatccac agcaagctct ttttacctac cgtcaccgtc ggcggttgca
     4381 caatgttcga tgctgtcacc atgtcatagt tgttctggtg gttagcgata tagatagcat
     4441 tgccgtagct ttcagcatct gcaggtttgc ggcactcaac tttcaggccg aacagcggcg
     4501 caagacggcc aaacatatgc ccaaaggtgg ccacatgttt cgggttacgc gggctgaaaa
     4561 ggcagtaaat ggagccgaat acacagacta agatgctgta aatcacggta ataataagac
     4621 gaaagatata tagcataaca acctctgaag gtctgagaga ctggcattgt acgtcacctg
     4681 aaatcaggtt agggcattgt taaaagccgc tctctggaaa agcgtattgt taatcgcaac
     4741 gcatgaataa acaacggttt caagggaatt tttatcgttt ccggggggtg aatacgctgc
     4801 cggatgacga cttaacgttt catccggcgt tccttgcaag cgggaggaaa caggccctcc
     4861 ccggcatatt actcttcgct atcaccgctg ctggcacggc gaggagagtc gatctcaaca
     4921 cgatcgatac gctgcaaacc gcgcatcaac gtaccgcggc gtccacgttc gccagtgact
     4981 ttctgtaact cttccgggcg cagtttaatt ttgcgtttcc caacatgaat ggtcagcgtg
     5041 ctttgcggcg gcagaacgta caattgcgcc agaccatctt ctccacgcgc ggcttctgcc
     5101 gatggaatgt tgataatctt gttgcctttg cccttcgaca gctgcggcag atcgcttacc
     5161 gggaacatca acatacggcc tgcctgagtg attgccagca gcatatcgga agcatcttca
     5221 atcaccaccg gcggcataac atgggcattt tccggtaagg tgatcaaagc cttacctgca
     5281 cggttacgcg ccaccagatc gttaaaggtg cagacgaaac cgtaacccgc atcggaagcc
     5341 atcagcagtt tctgatcgtc gctttccatc agcatatggt caacggtcgc cccaggcggc
     5401 aacgttaatt tgccggtgag tggttcgccc tgaccacgcg ccgacggcag cgtaatcggg
     5461 tcgatggcat agctacgacc ggtggaatca acaaacacta ccggttggtt gctcttacct
     5521 ttcaccgccg ctttgaagct atcacccgct ttataattca ggcccggcgc gtcgatatca
     5581 tggcctttag cgctgcgtac ccagcccatc agcgacagca caatggtgac aggttcagac
     5641 ggcagcatgt cgtgctcgct catcgctttc gcttcttcgc gttcctgcaa cggcgaacga
     5701 cgatcgtcac cgtaggcttg cgcgtctgcc tgcagttctt tcttcagcag gttattcatt
     5761 ttacgctcgg aaaccaaaat gccctgcaac tggtcgcgct ctttttccag ctcactctgc
     5821 tcaccgcgaa tcttcatctc ttccagtttg gcaagatgac gcagtttcag ttcgaggatc
     5881 gcttccgcct gggtttccgt aaggccaaac cgcgacatca gcgccggttt cggttcatct
     5941 tcgttacgaa tgatctcaat cacttcgtcg atgttgagaa acgccaccag caaaccttcc
     6001 aggatatgca ggcgcttgag gactttctcc agacgatagt tcagtcggcg gcgcacggta
     6061 tcgcgacgga acaccagcca ttcggagagg atttccagca ggtttttcac cgccggacga
     6121 ccatccagac cgatcatatt gaggttaatg cgatagctct tttccagatc ggtggtagcg
     6181 aagaggtggt tcatcacctg atccatatcc acgcggttgg aacgcggcac aatcaccaga
     6241 cgggtcgggt tctcgtggtc agattcatcg cgcagatcgt caaccatcgg cagctttttg
     6301 ttgcgcattt gcgcagcaat ttgctccagt acgcgcgcac ctgaaacctg atgcggcaat
     6361 gcgctgataa ccaccgcgcc atcttctttc ttccacaccg cgcgcatacg cactgaacca
     6421 cgtccgttct cgtagatttt acggatctcg gcgcgcgaag tgataatttc cgcttcagtc
     6481 ggataatccg gcccctgcac gatatccagc agctgatcga gcgtggtttt cggctggtcg
     6541 attaatgcga ttgccgcctg agctacttca cgcaggttat gcggtggaat atcggtcgcc
     6601 atgccgacgg caataccggt ggtgccgtta agcaaaatgt ttggcagacg ggcaggcagc
     6661 attttcggct cctgcaaagt gccgtcgaag tttggcaccc agtcagccgt cccctgcccc
     6721 agctcgctca atagcagttc ggaatatttc gacaaccggg attcggtgta acgcattgcc
     6781 gcgaacgatt tcggatcgtc cggcgcgccc cagttcccct gaccatcaac cagcggataa
     6841 cggtaagaga acggctgcgc catcaggacc atcgcttcat aacaggcact atcgccgtgc
     6901 ggatggtatt tacccagtac gtcaccgacg gtacgggccg attttttaaa tttggcgctg
     6961 gcattcaggc ccagttcaga catcgcatac acaatgcggc gctgaacagg tttaagacca
     7021 tcgccaataa acggcaacgc acggtccatg atcacgtaca tggagtagtt taagtaggcg
     7081 ttttccgtaa attcatgtag cgcaaggcgc tctgccatat cgctcattaa ttctgattcc
     7141 tcaacttatt cgccagcctt caaaggggca atattgccgg agatactaca ttatctgccg
     7201 cgtcgagtca caggagatca gcgtgaatag cgccgccgga cgtgctccga cggcgataaa
     7261 ggcatcaatg tgccttgata tacaactctt tgctgtagac ttgatcggca tagagggcag
     7321 cacaaggttg cgcccatgcc acaccactcg gcatgggggt ccgctccggg cgattcgaga
     7381 agttgaggtt atgcgagtcc agggaagcct aaagcatcaa agtagtcgac tgtaagtata
     7441 cggttcagcc cagtttagct gtgtctccac cagtgccccg cgcctcctgc cataagtgcg
     7501 gcttgctcat ggataccccc gagacggctt acggcgcacc ggataataaa tttcgcgtat
     7561 acatggtatt ccttaccgga gaaattataa gcccaacaac aatacgcctg tggcattgtt
     7621 cgctcaaact tatcgcgagt gatttggctc acactccggt aaagattccc catcacgcta
     7681 acggcacata aacatccgtt tccagtcgct gttctgtcat accttcggca agattggtgt
     7741 agtgaaacag aatcggtgct ttacgcattt tctcgccgct tgcaggcagc cagtggcgaa
     7801 tgatgcccca taccgtgtgt gaaatatcgt ccagctcgcc aacgtggcgg gccacggcat
     7861 aacgtccacc ggtaagttca ccattgctca caccataacg attatcggga atcggttcgc
     7921 taacgctgcc gcagatatca aagcgaaacg ctttcggtgc ggtggtggca gggtcgtccc
     7981 aggcgacgcc aaaagtctgg ctttggttaa caggagaaag ccccgtctct ttacgccaca
     8041 tgataaattt cgccacactg tagttgagca actcagggct acagcggtgc ggcaacatcg
     8101 ccacagggat tgatgggaaa tcgataatgt ttacatccag tgtcaggttt gtcattttgc
     8161 ctccctgcga aattattccc gggaacgcgt cccgggagcg gtaacaatta cggatttact
     8221 ttgcggatct gtttgacgtc aatttcaaca gaattccagt ctttatcgac ttccccctga
     8281 atctcaaccg tatctttcgg cgtcaccgtc acaccgttcc agcgtttgtg gtcgatatca
     8341 acattgatag taccgctggc atctttaaac acgtagagat cgtcagagat gcgttcaacg
     8401 atattgccgc gcagggttac ccaggtgtcg tcacgcaggg attttgcgct ttctacagtc
     8461 gttacgctgc cgttcggccc ctggaatcct ccggcctgac tttgcgttgc cgatgggcca
     8521 gaaaaaccgc cctgctctgc tgccatcacc ggtgcactgc acagggccat tactgcgatt
     8581 actgctgcga attttttcat gtttattact ccctttaatg tctgtttccg agcatttaac
     8641 aagatagtcc ttaacaactt cttaagggaa aaaaataaaa tttaatgctg tacagagcgc
     8701 gttacaacac ggtttactgg cagcaaatac ggttatcgca gggatgaaaa aatgcgaatt
     8761 ttactgatag aagatgacat gctgattggc gacggcatca aaactggcct tagtaaaatg
     8821 ggttttagtg tcgactggtt tacacaaggt cgtcagggaa aagaggcgct ttatagcgca
     8881 ccttatgatg cggtgatcct ggatttaacc ttaccaggca tggatggtcg cgatattttg
     8941 cgcgaatggc gagagaaagg tcagcgtgag ccggtactga tcctgaccgc gcgtgatgcg
     9001 ttagcggaac gtgtagaagg gctgcgtctg ggagctgacg attatctgtg taaacctttt
     9061 gcgttgatag aagtcgccgc caggctggag gctctgatgc gccgaaccaa cggccaggcc
     9121 agcaacgagc tgcgccacgg taacgtcatg ctcgaccccg gcaaacgtat cgccacgctg
     9181 gctagcgaac ccttaacact gaaaccaaaa gaatttgccc tgctggaatt actgatgcgt
     9241 aacgctggtc gggtactgcc gcgcaaactg attgaagaga aactgtatac ctgggacgaa
     9301 gaggtcacca gtaatgccgt tgaagtgcat gtgcatcatc tgcgacgcaa actcggtagt
     9361 gattttattc gtaccgtgca tggtattggc tacacattag gtgagaaatg aaatttaccc
     9421 aacgtcttag tctgcgcgtc aggctgacgc taatcttttt aattctggcc tcggtgacct
     9481 ggctgctttc cagctttgtc gcctggaaac aaacaacgga taacgtcgat gaattgttcg
     9541 acacccaact gatgctgttt gccaagcggt taagtacgct cgatctcaac gaaatcaacg
     9601 cggcggatcg catggcacag acgccaaata aattaaaaca cggtcatgtt gatgacgatg
     9661 cgctgacctt tgccatcttt acccacgacg gcagaatggt ccttaatgat ggcgataacg
     9721 gagaagatat tccctatagc tatcaacggg aaggttttgc tgacgggcaa ctggtcggtg
     9781 aagacgatcc ttggcgtttt gtctggatga cctcacctga tggcaaatat cgcatcgttg
     9841 ttggccagga atgggaatac cgtgaagaca tggcgctggc gattgttgcc gggcaattga
     9901 tcccgtggct ggtcgcactg ccgattatgt taatcatcat gatggtacta ctgggtcgtg
     9961 aactcgcgcc gctgaacaaa ctggcgctgg cactacgtat gcgtgaccct gactcggaaa
    10021 aaccactaaa cgcgactggc gtacccagcg aagtgcgacc actggttgag tcgctaaatc
    10081 aactgttcgc ccgcacacat gcgatgatgg ttcgagaacg acgctttacc tccgatgcag
    10141 ctcacgaact acgtagcccg ttaacagcgc tgaaagtgca aaccgaagtt gcgcagctct
    10201 ctgacgatga tccgcaggca cggaaaaaag cactgctcca attacattcc gggatcgatc
    10261 gcgctactcg tctggttgat caactgctca cgctatcgcg gctggactca ctggataacc
    10321 ttcaggacgt cgcggagatc ccgcttgaag atctcctgca atcgtcggtg atggatattt
    10381 accacacggc gcagcaggcg aaaattgacg tgcgactgac actcaatgtc cagggcatca
    10441 aacgcaccgg acaaccgcta ttgctaagtt tgttggtgcg aaatttgctg gataacgccg
    10501 tgcgttacag tccacagggc agcgtggtgg acgtcacgct gaatgccgat aatttcatcg
    10561 tgagggataa cggccccggt gtgacaccag aggcactggc gcgaattggc gaacgcttct
    10621 atcgcccctc cggacaaacc gctaccggca gtggacttgg gctatcgatt gtccagcgaa
    10681 tcgccaagct gcatggcatg aatgttgagt ttgggaatgc ggaacaaggt ggatttgagg
    10741 cgaaagtaag ctggtaaggg taagactttt gctaaattcg caaaagactt tgcacatttt
    10801 gctaatttca ccgtaccgct ctgtgacgta ctatagtcgg caaacgtctc accttgaggt
    10861 taaaaaatga gcaacattct gattatcaac ggcgcgaaaa aattcgccca ctccaatggt
    10921 caactgaatg acaccctgac cgaagtcgcg gatggcacac tgcgcgacct cgggcatgat
    10981 gttcgcatcg ttcgcgccga cagcgactac gatgtcaaag cggaagtaca aaactttctc
    11041 tgggctgatg tggtgatctg gcagatgcca ggctggtgga tgggcgcgcc gtggacagtg
    11101 aaaaaataca ttgatgatgt attcaccgaa ggtcacggga cgctgtatgc cagcgatggc
    11161 cgtacccgca aagatccgtc aaaaaaatac ggttccggcg gcctggtaca gggcaaaaaa
    11221 tatatgcttt ctctgacctg gaacgcacca atggaagcct tcaccgaaaa agatcaattc
    11281 ttccacggcg ttggcgtcga cggtgtgtat ctgccgttcc ataaagcaaa ccaattcctt
    11341 ggcatggaac cgctgccgac atttatcgct aatgacgtga taaaaatgcc tgatgttccc
    11401 cgctatactg aagaatatcg caagcatctt gtggaaattt ttggttaact agagctcagg
    11461 ctttagaagg agttaaccat gcttaccgta atcgcagaaa tccgtactcg tcctggtcaa
    11521 catcaccgtc aggcggtatt ggatcagttt gctaaaatcg ttccaaccgt actgaaagaa
    11581 gaaggttgcc acggctatgc gccaatggtg gattgcgctg ctggcgtgag tttccagtct
    11641 atggcaccgg attctatcgt gatgattgag cagtgggaaa gcatcgcgca ccttgaagcg
    11701 catctgcaaa ccccgcacat gaaggcgtac agcgaagccg taaaaggtga cgtgctggag
    11761 atgaatattc gtattctgca gccagggatt taatcctgcc ttgtttgccc ggccatcctg
    11821 accgggcaat gttctttcct ttaaacctca atctccgcca tgtcgccttt ctcttgcaac
    11881 cagttgcggc gatcttccga gcgtttcttc gccagtagca tgtccatcat cgcgtcagta
    11941 cgctgatcgt cttcatcatc gatagtcaac tgcaccagac ggcgagtgtt cggatcaagc
    12001 gtggtttcgc gcaattgcat cgggttcatt tcccccagac ctttaaaacg ctggacgttc
    12061 ggcttgcctt tcttgcgttt taattgctca agtacgccct ctttctcttc ttccgtcagc
    12121 gcgtaataaa cctctttccc gagatcaata cggtagagcg gtggcagtgc gacgtaaacg
    12181 tgaccgtgtt tcaccaacgc gcggaagtgt tttacaaaca aagcgcagag cagcgtggca
    12241 atgtgcagac catcggagtc agcatccgcc aggatacaga tcttgccgta acgaagctgg
    12301 ctcaaatcgt cgctgtcagg atcgataccg atcgctaccg aaatatcgtg cacttcctgc
    12361 gaagccagca cttcgtcgga agagacttcc caggtgttaa ggatcttacc tttcagtggc
    12421 atgatcgcct gatattcgcg atcgcgcgcc tgcttggcag atccgcctgc ggagtcacct
    12481 tccacaagaa acagttcggt gcggttaagg tcctgcgcgg tacagtcagc cagtttgcca
    12541 ggcagcgccg gaccgctggt cagcttttta cgcaccactt ttttagccgc acgcatacga
    12601 cgctgggcgc tggaaatcgc catctctgcc agcaactccg ccgcctgaac gttctggttc
    12661 agccacagga taaaggcatc tttcaccacg ccagaaacga atgccgcgca ctgacgcgaa
    12721 gagagacgct ctttggtctg cccggcaaac tgcggatcct gcatttttac tgacagcaca
    12781 taggcgcagc gatcccagat atcttccgcc gacagcttta caccgcgcgg cagaatgttg
    12841 cggtattcac agaactcacg catcgcgtcc agcaggccct gacgcagacc attaacatgg
    12901 gtaccgccct gcatcgttgg gatcaggttg acgtagcttt cggtcagcag ttcaccgcct
    12961 tccggcagcc acagtagcgc ccagtccacc gcttcagtat cgccagcgaa attaccgata
    13021 aacggttttt ctggcagcgt cggtaaaccg tttaccgctt ccgccaggta atcattcaga
    13081 ccgtcctgat agcaccagcg ctgttcggtg ttgttgatct catctttaaa ggtaatctca
    13141 acgccggggc acagtactgc tttggctttc agcacatgcg tcaggcgtga aacagaaaaa
    13201 cgcgggctat cgaagaaggt ttcatccggc cagaaatgga cgctggttcc ggtattgcgt
    13261 ttaccgcaag tgccgacaac ctgtaaatcc tgcacctttt cgccattttc aaaggcgatg
    13321 ttataaatct gaccatcgcg gcgcacgtta acttctacgc gcttcgacag ggcgttaacc
    13381 accgaaatcc ccacgccatg caggccgcca gagaactggt aatttttgtt agagaattta
    13441 ccgcctgcat gcagacggca aagaatcagt tcaaccgccg gtacaccctc ttccgggtga
    13501 atatccaccg gcatcccgcg cccatcgtca ataacttcta acgactggtc agcatgtaaa
    13561 ataacgtcca cgcgttttgc gtgacccgcc agtgcttcat ccacactgtt atcaatgact
    13621 tcttgcccca aatggttagg gcgagtggta tcggtataca tccccggacg gcggcgaacc
    13681 ggctcaagcc cggtgagtac ctcaatggca tcagcgttat aagtttgcgt catggtttaa
    13741 gttagtaatt cgagttgatc gtcagagatg gtgcagacca agaaaatcga cgatcgggtt
    13801 gaaataatct tcgaagcccg tgaatgcgtg gttgccgcct tctatgacag tctggcggca
    13861 ggaagcgtag tacgccaccg cctggcggta atccagcact tcatctcccg tctgttgcag
    13921 cagccagatc aaatccggcg cttccagcgg gtcaatctgc atgactttaa gatcgtaaat
    13981 atggcgtgac tctagcacat attgctgccc ggtgtagggg ttctcgttct gaccgagata
    14041 gtccgtcagc agttcaaacg ggcgcaccgc cgggtttacc accactgcgg gcagcataaa
    14101 acattgtgac aaccaggtgg cgtaatatcc ccccagtgac gaaccgacaa tacccagcga
    14161 atcgccgcca tgttccagga caatggattc cagcagctct gccgcgtcgg aaggatacgg
    14221 cggcaactgc ggaatgatca tctcaacgtc agggtgatgt tccgccagcc agttttttaa
    14281 caagctcgct tttgcagagc gcggcgagct gttgaaaccg tgtaaataaa gaagcgtaga
    14341 catcagtagc cttctgaagc ggtatcaggt tggaaacgtg tgtccgccag gcgatgcacc
    14401 tcggtggtca gcgtgccatc agcatgtaac tcgagagtac gccagccggg cgcgatggta
    14461 tccagcgtaa agttggaaca gtgcggctta aactgcacac aggtcgacgg cgttgccagc
    14521 aggcggcgac cgttccagtc gagatccagc tcctgatgaa tatgaccgca cagcaagtat
    14581 ttgacgtgcg gaaacttcgc cagcacggta tccagttcgc ccgcgttacg cagactgtgt
    14641 tgatcgagcc aactacaacc cgcaggtagc ggatgatgat gcagcagcag caacgtatgg
    14701 cgttctggcg catcggccag tttacgttcc agccactcaa gctgaaactc gctcagctca
    14761 ccgtgcggca cgccaaacac ctggctatcc agcaacagga tttgccattg ctcaccaata
    14821 aacacgcgct tcgccgggga gatacccgca tcctgtaacg cgctgtacat cgcgggctgg
    14881 aaatcgtggt tgcccggcag ccagacgcag ggcgcacgaa aacttgcgat gccttcagcg
    14941 aaatgctgat aggccgcaga ggattgatcc tgcgctaaat cacctgtcgc gacaatcagg
    15001 tcgaattcgt gctgatgtgg acgaatcgcc tccagcaccg cctggtagct ttcccaggtg
    15061 tttaccccta acagggcttc gtgcttttgt gcaaacaggt gagtatcggt aatttgtaaa
    15121 atcctgactc tggcctcacc agccagagga agggttaaca ggctttccaa atggtgtcct
    15181 taggtttcac gacgctagta aaccggaatc gccatcgctc catgtgctaa acagtatcgc
    15241 aaccagtccg ctaaaaactg gttaatttga tgcttttcgt cgcgttgatg caacttttta
    15301 ttaggataat cataccgcgc tttgaagcga aaaatctgct ggcttgaaca cacttcagcc
    15361 accatcgcgt catgatacag acgcaccgtc attgacggaa ggctccagta actgatcgcg
    15421 ggcgcagtct gttctattgt caccagggta gtgtatcggg tcgattccac aatcgtcagc
    15481 cgatattgtg cgtttgccac ctgatagctt acagtttcgc cgggtgcgtc attgcgcggt
    15541 aacaaacggc gcaattgtga aaagttcatc tcgcacaggc gcatcatttc aggaaagtca
    15601 ggtgtgtaac gcttcattta tgcccactca ttttttaacg cttggtggtg cagctgcagc
    15661 cattgcaaag cgatgaccga cgctgcgttg tcgattttcc cctcttctac ccactggtat
    15721 gcctgttccc ggcttaccac atgaacgcga atatcttcgt tttcatcagc cagaccatga
    15781 ataccgcttg cggtcgtggc gtccacttcg cccaccataa ttgacgaacg ctcactggtg
    15841 ccccccgggc ttgccaggaa acttaacacc ggtttggtcc gtttgactat cagccccgcc
    15901 tcttcaatcg cttcgcgacg ggcaacatct tccacacttt caccctcttc aatcatcccg
    15961 gcaaccatct ccagtagcca gggggtttcg ctagtgtcgt acgcggcaat tcgaatctgc
    16021 tcaatcagca caacttcatc acgcactggg tcaaagggta gcaagactgc ggcgtgaccg
    16081 cgctcaaaaa tttcccgccg cacctcatga ctcatttgcc cgttgaatag actatgacga
    16141 aatctataaa gatctaatga aaaaaagccg cgataaagtg tttctcgtgc aataatttct
    16201 acatcgtttt tgccaaatgt aacgggcagg ttgtctggct taagcattgt taatgtcctg
    16261 gcactaatag tgaattaaat gtgaatttca gcgacgtctg actgccgttt gagcagtcat
    16321 gtgttaaatt gaggcacatt aacgccctat ggcacgtaac gccaaccttt tgcggtagcg
    16381 gcttctgcta gaatccgcaa taattttaca gtttgatcgc gctaaatact gcttcaccac
    16441 aaggaatgca aatgaagaaa ttgctcccca ttcttatcgg cctgagcctt tctgggttca
    16501 gttcgttgag ccaggccgag aacctgatgc aagtttatca gcaagcacgc cttagtaacc
    16561 cggaattgcg taagtctgcc gccgatcgtg atgctgcctt tgaaaaaatt aatgaagcgc
    16621 gcagtccatt actgccacag ctaggtttag gtgcagatta cacctatagc aacggctacc
    16681 gcgacgcgaa cggcatcaac tcgaacgcga ccagtgcgtc cctgcagtta actcaatcca
    16741 tttttgatat gtcgaaatgg cgtgcgttaa cgctgcagga aaaagcagca gggattcagg
    16801 acgtcacata tcagaccgat cagcaaacct tgatcctcaa caccgcgacc gcttatttca
    16861 acgtgttgaa tgctattgac gttctttcct atacacaggc acaaaaagaa gcgatctacc
    16921 gtcaattaga tcaaaccacc caacgtttta acgtgggcct ggtagcgatc accgacgtgc
    16981 agaacgcccg cgcgcagtac gataccgtgc tggcgaacga agtgaccgca cgtaataacc
    17041 ttgataacgc ggtagagcag ctgcgccaga tcaccggtaa ctactatccg gaactggcgg
    17101 cgctgaatgt cgaaaacttt aaaaccgaca aaccacagcc ggttaacgcg ctgctgaaag
    17161 aagccgaaaa acgcaacctg tcgctgttac aggcacgctt gagccaggac ctggcgcgcg
    17221 agcaaattcg ccaggcgcag gatggtcact taccgacgct ggatttaacg gcttctaccg
    17281 ggatttctga cacctcttat agcggttcga aaactcgtgg tgccgctggt acccagtatg
    17341 acgacagcaa tatgggccag aacaaagtgg gcctgagctt ctcgctgccg atttatcagg
    17401 gcggaatggt taactcgcag gtgaaacagg cccagtacaa ctttgttggt gccagcgagc
    17461 aactggaaag cgcgcatcgt agcatcgtgc aaaccgtacg ttcctccttc aacaacatta
    17521 atgcatctat cagtagcatt aacgcctaca aacaagccgt agtttccgct caaagctcat
    17581 tagacgcgat ggaagcgggc tactcggtcg gtacgcgtac cattgttgat gtgttggatg
    17641 caaccaccac gctgtacaac gctaagcaag agctggcaaa tgcgcgttat aactacctga
    17701 ttaatcagct gaatattaag tcagccctgg gtacgttgaa cgagcaggat ctgctggcac
    17761 tgaacaatgc gctgagcaaa ccggtttcca ctaatccgga aaacgttgcc ccgcaaacgc
    17821 cggaacagaa tgctattgct gatggttatg cgcctgatag cccggcaccc gtcgttcagc
    17881 aaacatccgc acgcactacc accagtaacg gtcataaccc tttccgtaac tgatgacgac
    17941 gacggggctt cggccccgtc tgaacgtaag acaacgtaaa gatacgggtt atctgccgca
    18001 ttcttccccc ttctcgcttc aatttcgacc agccatcctc tattctgatg ggtatttacc
    18061 actggtcccg gaagacaaaa atgaaacgga caaaatccat acgccacgca tcgttccgca
    18121 aaaactggag cgcacgccat ctgacaccag tcgctctcgc ggttgccact gtttttatgc
    18181 tggctagctg tgaaaagagt gatgaaacag tgtctctcta tcaaaatgct gacgactgtt
    18241 cagctgcaaa cccaggcaaa agcgccgaat gtaccaccgc gtacaacaat gcgctgaaag
    18301 aagccgaacg tactgcgccg aaatacgcca cccgtgaaga ctgtgttgct gaatttggtg
    18361 aaggtcagtg ccagcaggca ccagcccagg ctggcatggc accagaaaac caggcgcagg
    18421 cccagcaatc cagcgggagt ttctggatgc cgctgatggc cggttacatg atggggcgtc
    18481 tgatgggcgg cggcgcggga tttgcacagc agccgctgtt ctcctcgaaa aacccagcca
    18541 gcccggctta cggtaaatat accgacgcga cgggtaaaaa ctatggcgca gcccagccag
    18601 gccgcaccat gaccgtaccg aagacagcca tggcaccaaa accggcgacc actactaccg
    18661 ttacccgtgg cggttttggt gaatctgttg ccaaacaaag cactatgcag cgtagcgcaa
    18721 ccggcacctc ttctcgttca atgggtggct gataccgatg gaaagagtca gtattaccga
    18781 gcgcccggac tggcgtgaaa aagcccacga atacggtttc aattttcaca ccatgtacgg
    18841 cgagccgtac tggtgtgaag atgcttacta caagttgccc ctcgcccagg ttgaaaagct
    18901 ggaagaagtc accgccgaac tgcaccagat gtgcctgaaa gtggtggaaa aagtgatcgc
    18961 cagcgatgag ctgatgacca aattccgcat tccaaaacac acctggagtt ttgtgcgtca
    19021 gtcatggctg actcaccagc catcgcttta ttcgcgtctt gatctggcat gggatggcac
    19081 tggcgaacct aaactgctgg aaaataacgc cgatacacca acgtcactat acgaggcggc
    19141 gttctttcag tggatctggc tggaagatca gcttaacgcc ggtaacttgc cggagggcag
    19201 cgaccagttt aacagtctgc aagaaaagct aatcgatcgc tttgtcgagt tgcgtgaaca
    19261 gtatggcttc cagttgctgc atctcacctg ctgtcgcgac acggtggaag atcgcggaac
    19321 cattcagtat ttgcaggact gcgcgacgga agctgaaatc gctaccgagt tcctctacat
    19381 tgacgatatc gggttaggtg aaaaaggtca gttcacggat ttacaggatc aggtaatttc
    19441 caacctgttc aagctgtatc catgggaatt tatgttgcgt gagatgttct ccaccaagct
    19501 ggaggatgca ggcgtacgct ggctggaacc ggcgtggaag agcattatct ccaacaaagc
    19561 gcttctaccg ctactgtggg agatgttccc gaatcacccg aacctgctgc ccgcttattt
    19621 tgcggaagat gatcatccgc aaatggaaaa atatgtggtt aaaccgatct tctcccgtga
    19681 aggcgcaaac gtgtcgatca ttgagaacgg caaaaccatt gaagcagcgg aaggtccgta
    19741 tggcgaagaa gggatgattg ttcagcaatt ccatccgtta ccgaaattcg gcgacagcta
    19801 tatgctgatt ggtagctggc tggtgaacga tcaacccgcc ggaattggca ttcgtgaaga
    19861 ccgtgcattg atcacccagg atatgtctcg gttttatcca catatttttg ttgagtaatc
    19921 aatgatgccg gatggcattc gccatccggt aattgttaac ctatctgcac cgacagcata
    19981 ctcaggctgc ccatttctat accatcgacc ggaatggtaa ttggctcctg cccatcccac
    20041 gcacctaaga catacaacaa cggcagatag tgctccggcg ttgggttcga taacgcgcca
    20101 ccttcatggt cgaggtaatt caccagagga tgctgctcta ccgccccttg ccacgtcaga
    20161 ttcgctttca catactcatt aaacgacatc gcccaaggat atggtgaact atcaccgtgc
    20221 cacttcactg tacgcaggtt atgcaccacg ttgccactgg cgaccaacat tattccttca
    20281 tctcgcagcg ctgccagttt gcgccccatt tcgaaatgcc aggcggcagg tttgctactg
    20341 tcgatactca actgcaccat cgggatatcg gcgtcaggat acatcttaat cagcacgccc
    20401 caggaaccgt ggtcaaagcc cctggcttct ttatccagcg tcaccgggac cggcgctaac
    20461 agctcaacca gatgctgtgc cagcacaggc gaacccggag caggataatg cgtatcgtac
    20521 agcgcctgcg ggaagccacc aaagtcatga atcgtgggcg gcgtctccat cgcggtcact
    20581 cctgttccac gggtaaacca gtgagccgaa accaccacaa tcgcttgcgg gcgtggcaat
    20641 gtcatcccca acttctgcca gctgcgggta tacaaattat cttccagcac gttcatcgga
    20701 ctaccgtgac ctaaaaacaa tgctggcata cgtgttgaag acatgatgat atccttaact
    20761 aagggtgtca ttttgatatc ctcacaatac gcttgttcgg cggagtaaga acccggataa
    20821 caatgatgat gatcatcagt tattttgacg atctgcctga aggtgaagat ttataaggag
    20881 ttgtcgatgt cagtacctct cattctgacc atactggcgg gggcagccac gtttattggc
    20941 gcgtttctcg gcgttctcgg acaaaaaccc tcgaaccgct tactggcgtt ttcgctaggt
    21001 tttgcggcgg ggatcatgtt gctcatctca ttaatggaaa tgcttcctgc cgcactagca
    21061 gctgaaggaa tatcgcctgt gttgggttat ggaatgttta tcttcggtct gcttggctac
    21121 tttggcctgg accgcatgtt gccgcatgcg catccgcagg atttaatgca aaaatcggtg
    21181 cagccgttgc caaaatcgat caagcgcaca gccattctgc tcactctcgg catcagtctg
    21241 cataacttcc cggaagggat tgccaccttt gtcacggcga gcagcaacct ggagctggga
    21301 tttggcatcg cactggccgt cgcgttgcac aatatccctg aaggtctggc agtggcaggc
    21361 ccggtttatg cggcaacggg gtctaaacgc accgcgattc tgtgggcggg gatttctgga
    21421 ctagcagaaa ttcttggtgg tgtgctggcg tggttaatcc tcggtagcat gatttccccg
    21481 gtggtcatgg cggcggttgc aggaattatg gtggcgctct cggttgatga attaatgccg
    21541 ctcgccaaag agattgaccc taataataac cccagctatg gcgtactatg tggaatgtca
    21601 gtgatgggat tcagtttagt gctgctacaa acggcgggaa ttggttaaaa acaacatcag
    21661 aagttgtcca gcacatggac aacttctgcc agcttcacga aagccttatt ctaccttttc
    21721 ggctgtctct tctctcgtac tgtttaagta tttgttccgc gcttcaagca gtgcgtctct
    21781 gtcctggcga aacgcccgac aataacgttt caaatgcagg aaataaccca ccacaaccag
    21841 agcaatcaat acaatccagt accaggcgat aaacatcctt tacccttaat atttaacaat
    21901 actaaacatt tagcgcataa atttcacata tcctttttcg gatatattca tatggtcgca
    21961 taataacgga acaattatat gattttgatc ataatgaaaa agaatgcctg atattaatga
    22021 aattttctca tagaaagaga agcggaatta acatcttgca tagcagggca aaataaaaac
    22081 cgaagccagc tacaacttcg gtttcttgat taaggcagta attaagcagc ggttttcagc
    22141 tggctttacg ctcatgtgcc tgacggtatg ccaccaggtc ttcaatagtc acgagcgcca
    22201 tattgtgttt attggcaaac tcaatgcact ctggtgcacg cgccatcgtg ccatcgtcat
    22261 tagtcagctc acacagcaca ccagccggtt taaagcctgc cagcgtcatc aaatcaatag
    22321 tcgcttcagt atgaccgcca cgcgtcagta caccacctgc ctgcgcgcga agtgggaaaa
    22381 cgtggcccgg gcgattcaga tcagaaggtt ttgcgccatc ggcaatcgct gcgcgaacgg
    22441 tcgtaatacg atcagcggca gaaacaccgg tagtcacacc ttcagccgct tcaatggtca
    22501 cggtaaaacc ggtgccatag gcgctggtgt tattttctac catcattggc agatcaagtt
    22561 gtttacggcg atcttcagtg atgcacaggc aaacaatacc gctaccgtgg cgaatggtca
    22621 gcgccatctg ctcaacggtc atggtttctg ccgggaagat catatcgcct tcgttttcac
    22681 ggtcttcatc atcaagcacc attacaccgc gtccttcacg cagcgcagcc agtgcatttt
    22741 caacacgttc gaaaggcgta ccaaaagagg aaagtagcgt ctgattcatg gtaaaaaaaa
    22801 ctcactaaaa ttatggttac cagaatcagg gcagtcttag gagtggcggc atatagccaa
    22861 aataacgtga gcgggtccat gcccgacaga atcgttactc tctcccatcc ggactctaac
    22921 cgtcggcccc ggaattacac cggatctgct gtcctttgag ttcgcaccca aagcgctcgc
    22981 gggctttcaa ctgagttgat ttaccgccgg tggggaattt cgccccgccc tgagaataag
    23041 cggattcact ataacgctaa tgattagcgg cagcaacgca tagcttcaca taattctggt
    23101 ttatgactta cccttatcgc actacaatgg tactcaacac ctatcagtac agggaaacta
    23161 caatgattga cccgaaaaaa attgagcaaa tcgctcgcca agttcacgaa tcaatgccta
    23221 aaggaatcag ggagttcggg gaagatgtgg agaaaaaaat ccgccaaacc ctacaagctc
    23281 agctgacgcg cctcgacctt gtaagccgtg aagagttcga cgtccaaacg caagtcctgt
    23341 tacggactcg tgagaaactg gcgctgcttg aacaaagaat gagcgaactg gaaaatcgca
    23401 gtactgagat taaaaagcag ccagatccag agactctccc cccaacgctg taaacatttg
    23461 tctttaatgc actgtaaatt atgaattaat cttctaattt acagtgcttt ctattacctt
    23521 atcgcttaat tccattcaga atatcaccac aaaaatgaat gagtgcaatt gaaaatataa
    23581 ttgttatgta tttttttaag ttttacttaa tccatattta gataaactaa tttcataaaa
    23641 cccgaaaagt aaaatataat atttgaatga ttagcaatcc ttaaataaca gttactaatc
    23701 attcattttc tacttatatt tatataaagg aatattatgt ctgcttttaa aaagtcactt
    23761 cttgttgctg gcgtagcaat gattctttcc aataacgtat ttgctgacga aggtcacggc
    23821 attgttaaat ttaaaggtga agttatctct gctccatgtt caattaaacc aggtgacgaa
    23881 gacttaactg taaatctggg tgaagtagca gataccgttc tgaaaagcga ccagaaatct
    23941 ttggctgagc ctttcactat tcacctgcaa gactgcatgt tgagccaggg tggaaccact
    24001 tattcaaaag cgaaggttac tttcaccaca gcgaatacta tgacgggtca gactgacctg
    24061 ctgaaaaaca ccaaagaaac tgaaatcggt ggtgccacag gcgttggcgt acgtattctg
    24121 aatagccaga gcggcgaagt gactttaggt actccggtag taattacatt caacaatact
    24181 aacagctatc aggaactgaa cttcaaagtt cgtatggaat ccccgggcaa agatgctacc
    24241 ccgggcaacg tttacgctca ggctgactat aagattgctt acgagtaatc acattaggcc
    24301 gggttcgccc ggccacatca ttaacggatt aatgataagt ggaacagatg tataaaaaat
    24361 taaaattaac cacaataagc gaattgatta aaaatattta ttgttcatta tccgttctca
    24421 tcattggttg tgcgtcagct tatgccgttg aattcaacaa agatttaatc gaagccgaag
    24481 atcgtgaaaa cgttaacctt tcccaatttg aaactgatgg ccaattaccc gtaggtaaat
    24541 actcattaaa cgctattatt aataataaaa ggacgccaat ccatctggac ctgcaatggg
    24601 tattaattga taaccaaact gcagtttgtc tgactccaga gcaattaaca ttattaggct
    24661 ttactgatga gattattgaa gaggctcagc aaaacctgat cgatggttgt taccctatcg
    24721 aaaaagaaaa acaaattaca acttatctcg ataaagggaa aatgcaatta tccatatctg
    24781 cacctcaggc atggttaaaa tacaaagatg caaactggac gcctcctgaa ctttgggatc
    24841 atggtattgc tggggcattt cttgactaca atttatatgc ctctcattat gcaccacatc
    24901 agggcgataa ttcacaaaat ataagttcct atgggcaggc tggggttaat cttggggcct
    24961 ggcgcctgcg tactgattac cagtacgatc agtcatttaa caatggcaaa agccaggcga
    25021 acaacctgga ttttccgcgt atttatttgt ttcgcccaat cccagcaatt aatgcaaaac
    25081 taactatagg tcaatacgat actgaatcct ctattttcga ctctttccat ttttctggcg
    25141 tttcgttgaa aagcgatgag aatatgttgc cgcctgatct acgtggttac gcaccgcaaa
    25201 tcacgggtgt tgcacaaacg aatgcaaagg tcactgtctc acagaacaac cgtattattt
    25261 atcaagaaaa tgttcctcct ggcccatttg ctattactaa tttattcaat acattacagg
    25321 ggcaactgga cgtcaaggtt gaagaagagg acgggcaagt cacgcaatgg caagttgcat
    25381 ctaatagtat tccttatctg acgcgtaaag ggcagattcg ctacaccact gctatgggta
    25441 aaccgaccag cgttggtggt gattccttac aacaaccctt cttctggact ggtgaattct
    25501 catggggttg gctgaacaat gtatccctgc atggtggttc agttttaaca aaccgtgatt
    25561 atcaatctct ggctgccggc gttggcttta accttaactc attgggttca ttatcttttg
    25621 atgtcacacg atctgatact cagttgcata atcaggataa agaaacgggt tatagctacc
    25681 gcgctaacta ttcaaaacgt tttgaatcta ccggtagcca gctcactttc gctggttacc
    25741 gtttctctga taaaaacttt gtgacaatga atgaatatat caatgacact aaccattaca
    25801 cgaat
//
LOCUS       DADKRT010000041        25509 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.041, whole genome shotgun sequence.
ACCESSION   DADKRT010000041 DADKRT010000000
VERSION     DADKRT010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25509
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.041"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..183
                     /locus_tag="JQ356_001438"
     CDS             <1..183
                     /locus_tag="JQ356_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HAY4621582.1"
                     /translation="ACMAITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPD
                     IGRQLSPDAWDDVSQE"
     gene            253..1029
                     /gene="yaaA"
                     /locus_tag="JQ356_001439"
     CDS             253..1029
                     /gene="yaaA"
                     /locus_tag="JQ356_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HAY4621583.1"
                     /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP
                     QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
                     AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
                     IIENRLTKPEQLTGFNSEGYFFDEASSSNGELVFKRYEQR"
     gene            complement(1182..1478)
                     /locus_tag="JQ356_001440"
     CDS             complement(1182..1478)
                     /locus_tag="JQ356_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY4621584.1"
                     /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGY
                     YWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR"
     gene            complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="JQ356_001441"
     CDS             complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="JQ356_001441"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HAY4621585.1"
                     /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
                     EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
                     LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN
                     DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
                     TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
                     TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ"
     gene            complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="JQ356_001442"
     CDS             complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="JQ356_001442"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HAY4621586.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF
                     SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
                     VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
                     QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
     gene            complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="JQ356_001443"
     CDS             complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="JQ356_001443"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HAY4621587.1"
                     /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
                     NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASRIPADHMVLMAGFTSGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
                     VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
                     LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG
                     KVLRYVGNIDEDGACRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     gene            complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="JQ356_001444"
     CDS             complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="JQ356_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HAY4621588.1"
                     /translation="MKRISTTITTTITITTGNGAG"
     gene            complement(6734..7420)
                     /locus_tag="JQ356_001445"
     CDS             complement(6734..7420)
                     /locus_tag="JQ356_001445"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY4621589.1"
                     /translation="MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPAT
                     RWVAHGSGDIIDNIKVFPTLVESLHDVDFTVATTARSRAKYHYYATPVELVLLLEEKS
                     SWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQ
                     QPTKSDTTADQHQLQALRERVMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRL
                     LHDIEKNITK"
     gene            complement(7820..7960)
                     /locus_tag="JQ356_001446"
     CDS             complement(7820..7960)
                     /locus_tag="JQ356_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621590.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILT
                     AT"
     gene            8056..8772
                     /gene="arcA"
                     /locus_tag="JQ356_001447"
     CDS             8056..8772
                     /gene="arcA"
                     /locus_tag="JQ356_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HAY4621591.1"
                     /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLED"
     gene            complement(8832..10184)
                     /gene="creD"
                     /locus_tag="JQ356_001448"
     CDS             complement(8832..10184)
                     /gene="creD"
                     /locus_tag="JQ356_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HAY4621592.1"
                     /translation="MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDA
                     IRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEE
                     RKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNIILGKPFIVISVGDARGIGVVKAPE
                     VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLQLNMALNLSGTGDLSVVPAGRNS
                     EMPLTSNWPHPSFLGDFLPAKREVSESGFQAQWQSSWFANNLGERFASGNDTGWENFP
                     AFSVAVTTPADQYQLTDWATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVM
                     WGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDQLRIWK
                     "
     gene            complement(10242..11666)
                     /gene="creC"
                     /locus_tag="JQ356_001449"
     CDS             complement(10242..11666)
                     /gene="creC"
                     /locus_tag="JQ356_001449"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HAY4621593.1"
                     /translation="MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLID
                     TATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQG
                     KVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRL
                     IGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYAD
                     SVTDNKPVPLPELGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRG
                     AAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTVVDVAALF
                     RRVSEARTVQLAEKNITLHVMPTEVNVAAEPALLEQALGNLLDNAIDFTPESGRITLS
                     AEVDQEHVALKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
                     GEVTLRNVQEGGVLASLRLHRHFT"
     gene            complement(11666..12355)
                     /gene="creB"
                     /locus_tag="JQ356_001450"
     CDS             complement(11666..12355)
                     /gene="creB"
                     /locus_tag="JQ356_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HAY4621594.1"
                     /translation="MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR
                     QLVPDVMILDVGLPDISGFELCSQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYV
                     AKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEF
                     LLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLHAKLRAINPDLSPINT
                     HRGMGYSLRGL"
     gene            complement(12368..12841)
                     /gene="creA"
                     /locus_tag="JQ356_001451"
     CDS             complement(12368..12841)
                     /gene="creA"
                     /locus_tag="JQ356_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HAY4621595.1"
                     /translation="MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGE
                     VVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ"
     gene            13052..13921
                     /gene="robA"
                     /locus_tag="JQ356_001452"
     CDS             13052..13921
                     /gene="robA"
                     /locus_tag="JQ356_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HAY4621596.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMR
                     YQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVM
                     LQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRP
                     INLRCELLIPIRR"
     gene            complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="JQ356_001453"
     CDS             complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="JQ356_001453"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HAY4621597.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAK
                     ELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEEN
                     WRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAARRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR"
     gene            14617..15138
                     /gene="yjjX"
                     /locus_tag="JQ356_001454"
     CDS             14617..15138
                     /gene="yjjX"
                     /locus_tag="JQ356_001454"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP phosphatase"
                     /protein_id="HAY4621598.1"
                     /translation="MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQ
                     PFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSA
                     TLPLPAVILQKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVIL
                     ALSPFHNAVYQAL"
     gene            complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="JQ356_001455"
     CDS             complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="JQ356_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HAY4621599.1"
                     /translation="MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLT
                     PDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEE
                     VLLKSD"
     gene            complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="JQ356_001456"
     CDS             complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="JQ356_001456"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HAY4621600.1"
                     /translation="MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAI
                     ISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNED
                     QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYE
                     LKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYA
                     FNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQ
                     QFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRYFMGDKPTLMSATEWGRRY"
     gene            17787..19454
                     /gene="ettA"
                     /locus_tag="JQ356_001457"
     CDS             17787..19454
                     /gene="ettA"
                     /locus_tag="JQ356_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HAY4621601.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI
                     ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWV
                     RQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYG
                     DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD
                     QFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK"
     gene            complement(19761..20993)
                     /locus_tag="JQ356_001458"
     CDS             complement(19761..20993)
                     /locus_tag="JQ356_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide
                     kinase/transcriptional regulator NadR"
                     /protein_id="HAY4621602.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDD
                     TRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     IALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEDDYD
                     SRFLRCVELVREMMGEQR"
     gene            complement(21014..22396)
                     /gene="radA"
                     /locus_tag="JQ356_001459"
     CDS             complement(21014..22396)
                     /gene="radA"
                     /locus_tag="JQ356_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HAY4621603.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIE
                     QICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
                     GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
                     LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
                     QNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
                     DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKL
                     SDALSVFDDL"
     gene            complement(22445..23413)
                     /gene="serB"
                     /locus_tag="JQ356_001460"
     CDS             complement(22445..23413)
                     /gene="serB"
                     /locus_tag="JQ356_001460"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HAY4621604.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLG
                     KIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRS
                     RVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKL
                     RLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGAND
                     LPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK"
     gene            23519..24163
                     /locus_tag="JQ356_001461"
     CDS             23519..24163
                     /locus_tag="JQ356_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HAY4621605.1"
                     /translation="MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR
                     SGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE"
     gene            24191..25207
                     /gene="lplA"
                     /locus_tag="JQ356_001462"
     CDS             24191..25207
                     /gene="lplA"
                     /locus_tag="JQ356_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HAY4621606.1"
                     /translation="MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     SIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEA
                     EIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHI
                     TRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSTWIA
                     GAVR"
BASE COUNT         6132 a         7028 c         6334 g         6015 t
ORIGIN      
        1 gcctgcatgg ctattaccaa tttgaccgcc attttactgc tctcgcctgt ggttcatacc
       61 attgccagtg attatctacg ccagcgtaaa ctcggcgtgc gcccggtgtt tgatccgttg
      121 cgttatccgg atatcggtcg ccagctttct ccggacgcgt gggatgatgt ttcgcaggag
      181 taatcacaac tatcgatcaa ctcattctct ttttttgcta aagtcggcat aaatttcctg
      241 caaggactgg atatgctgat tcttatttca cctgcgaaaa cgcttgatta ccaaagcccg
      301 ttgaccacca cgcgctatac gctgccggag ctgttagaca attcccagca gttgatccat
      361 gaagcgcgga aactgacgcc tccgcagatt agcacgctga tgcgcatcag cgacaaactg
      421 gcgggtatca acgccgctcg ctttcatgac tggcagccag atttcacgcc ggcgaatgcc
      481 cgccaggcga ttctggcgtt taaaggtgat gtctacaccg gcttgcaggc cgaaaccttc
      541 agcgaagacg atttcgattt tgcccaacag catttgcgaa tgctttccgg cttgtatggc
      601 gtactgcgcc cgctcgattt aatgcagcct tatcgtctgg aaatggggat ccgtcttgag
      661 aatgcccgag ggaaagatct gtatcaattc tggggagata tcatcaccaa caagctgaac
      721 gaggcgctcg cagcacaagg cgataatgtg gtgattaatc tggcgtcaga tgagtatttt
      781 aaatcggtga agccgaagaa attgaatgcc gagattatca agccggtgtt cctcgatgag
      841 aagaacggca aatttaagat catcagcttc tacgctaaga aagcacgcgg tctgatgagt
      901 cgtttcatta ttgaaaatcg gctgaccaaa ccagagcaac tgactggttt taatagcgaa
      961 ggttacttct ttgatgaagc ttcctccagc aatggcgaac tggtgtttaa acgctacgag
     1021 cagcgttaag tttgcagtca atgccggatg cggcgtgaac gccttatccg gcctacaaaa
     1081 gcatgcagat tcaatatatt gcagaattca cgtaggcctg ataagacgcg ccagcgtcgc
     1141 atcaggcgct gaatgccgga ttgttacccg gcatttgtca tttagcggtg atgtttgcct
     1201 ggaccatgac cgccgtgatg atcatgagga gctttcttat ggtggcgcgg cggtggcggc
     1261 ggtccgtgtg ggtgccagcg attgcctcgc cattcataat gttgtttcca ccagccgtgg
     1321 tcgcgccagt gacctccatc ccagtaatag ccacgattat cacgattgcc tatctgtaat
     1381 tttactgacg ggactaacgt aatttccgca gcctgtgctg ccatgggagc gaccagaacc
     1441 agggaaagtg cgagtacgat agattgcatc tttttcacag gttactcctt ttatcattgc
     1501 ccgttatggg tcgatatccg gagattacgc gatgagaacg acggttgtta ttctccgcaa
     1561 tcctaatctc taagttaccg catttattga gaatatctcc tttttccctg tcgtttttct
     1621 ccataatttc ttcataaaaa agccgggctg cataaaagca aacccggcct gattgagata
     1681 atgaatagat tttactgatg attcatcatc aatttacgca acgcagcaaa atcggcgggc
     1741 agattatgtg aaagcaaggg taaatcagca cgttctgcca gctcttttgg cagatccaac
     1801 gtttcaccga gaatcgcttc cacgctctct ttaaatttcg ccggatgcgc ggtgccgagg
     1861 aacaagccat attcgcctgg attcaactgg tcacgcagcg cacgatacgc tacggcagcg
     1921 tgcggctccg aggtgtagcc cagttctttt aactcacgca ttgtctgttg cgtggtttca
     1981 tcatccacgg ctgcataacc cagctctttc agttgccaga ttttgcggcg gaacaactct
     2041 tccacacgcg gccagttgtt cggctgactc acgtccatcg cgttggataa cgtcgcctga
     2101 gtcgctttgg gtgaccactg accgtcgtgc aggaaacgtg gcacggtatc gttcacgttg
     2161 gtcgcagcaa taaaacgttt caccggcaga ccgagtgact tcgccagcag acccgccgtc
     2221 aaatcgccga agtttccgct tggcaccgag acaaccagct ggttgcgcgc ttcctgcggc
     2281 agctgcgcaa ctgcttcaaa gtagtagcaa atctgcgcca gcaaacggct gatgttaatc
     2341 gagttagctg agtttaaccc cagcgccact ttcagctctt catcatcaaa cgcctgcttc
     2401 accagcgcct gacaggcatc gaaatcgccg tcgatggcaa cagtttcgat attgccgccc
     2461 aatgtacaga acagtttttc ttgcagtgga ctgattttgc ctcgtggata gaggataacc
     2521 actttcacat tcggtaaacc gtagaaagca tgagccactg ccgctccggt atcaccggag
     2581 gtcgcggtca gaatggtcac tggcttatcg cccgcaatat gggtcagcat ttgtgccata
     2641 aagcgaccgc cgaaatcttt aaatgccagc gttggcccgt ggaacaattc cagacaaccg
     2701 acatcgcttt caacattggc gaccggagcc gggaaggcaa acgccgcgcg cacgcgctct
     2761 tccaggattt cctgcgggat ttcatcacca ataaacgccg agaggatctt cgcactgcgg
     2821 gtgacaaaat ccagcttcag catctcatca atttcagtca ggctgaattc cggcaggtcg
     2881 tgcggaaaaa acagcccctg atttttgccc aacccctggg ttacggcttg cgcaaagctg
     2941 acctgctcat tgtgatcttt cagattgtag agtttcattt agttttccag tactcgtgcg
     3001 cccgccgtat ccagccggca aatatgaaca aaaccttcct gattttgcag gtagttctta
     3061 cccaaccagt cggcaacgcg ctgggcggta tccggcttgt cacacagagc gaacaaggtc
     3121 gggccggagc cggagatacc gctcgctacc gcgccgattt ccgcaaccgc ctgccgcgcc
     3181 tgccggaagc caggcagtaa ccgttcacgg tagggttcag cgataacatc tttcatcagc
     3241 ttcgcggcaa gctcaggctg acgggaatag caggcgtgaa tgaagccagc cagatgtcgc
     3301 ccgtgcgcaa tgcaatcctg gcggcgatac tgcgccggta aaatagccct ggcttctgcc
     3361 gttgagactt taatccccgg atacgccagc acccacagcc actcatcaaa ccctggcact
     3421 tgctggctga tgatgtcgtt ttcttcgatc atcaactgca taccaccaag aaaacacggt
     3481 gccacgttgt cgtaatgaat gctgccggag attcgtcctt ccagctcgcc catcaaagcc
     3541 agcaaacgag tgtcattaag cggcttgcca cagtgttcat tcatcgccat cagcgccgcg
     3601 accaccgaac aggcgctgga gcctaagccc gaaccgattg gcatattctt ttccagagtc
     3661 atcgccactg gaatttgctt gccaagctcc tggcaaaaac gctcccagca ctgataaacg
     3721 atattttccc gtggttctga cggcagctta tcggcaaagc gtccgaggtt gttgagactg
     3781 aatgtctctg ccgcctcaac cgtgactaca tctccgagca atgcaccatc aacaggtgtc
     3841 accgccgccc cgagcacatc aaacccgacg ctcatattgg cactggaagc cggggcataa
     3901 actttaacca tgtcagactc ctaacttcca tgagagggta cgtagcagat cggcaaagac
     3961 accggcagct gtaacgtcat tgcccgcacc atatccgcgc agcaccaacg gcagcggctg
     4021 ataatagtgg ctataaaagg ccagggcgtt ttcgccattt ttcactttga acagcggatc
     4081 attaccatcc acttcggcaa tcttcacgcg gcaggcacca tcttcatcaa tattgccaac
     4141 atagcgcaaa acttttcctt catcacgggc cttcgccacg cgcgcggcaa agagatcgtc
     4201 gagctgtgac agattcgcca taaaagcggc aacatcaccc tcagcgttaa actctgcggg
     4261 cagcacaggt tcaatttcaa tatccgccag ctccagttca cgtcccgttt cacgagcgag
     4321 aatcaatagc ttacgcgcta catccatacc agaaagatca tctcgcggat ccggttcggt
     4381 ataacccatt tcccgcgcca gagtagtcgc ctcggagaaa ctcatgcctt cgtctaactt
     4441 gccgaagata taagaaagcg aacctgaaag aatgccggag aacttcatca attcatcacc
     4501 agcattgagc agattttgca ggttctcaat aaccggtaat ccagccccaa cgttggtgtc
     4561 atagaggaat ttacgccgcg atttttccgc cgcatgacgc aacagatggt agtaatccat
     4621 cgacgaggtg ttggcctttt tgttcggcgt gacaacgtgg aaaccttcgc gcaagaagtc
     4681 ggcatattga tccgccactg cctggctgga ggtgcagtca acaatgaccg ggttcagcag
     4741 atgatattct ttcacgaggc gaattaagcg cccgagatta aacggctctt tggcttgcgc
     4801 cagttcttcc tgccagtttt ccagatttag gccatgcaca ttggtgagca gtgccttcga
     4861 gttggcaaca ccgcagacac gtaagtcgat atgtttattc ttcagccagc tttgttgacg
     4921 cttcagttgc tccagcagcg caccgccaac gccaccgacg ccaatcacaa acacttcgat
     4981 aacctgatcg gtattgaaca gcatctgatg agtaacgcgc acgccagtgg tcgcatcatc
     5041 gttatttacc acgacagaga ttgagcgttc agaagatccc tgagcaatgg cgacaatgtt
     5101 gatattggcg cgggccagcg cggcaaagaa tttcgccgag atcccacgca aggtgcgcat
     5161 accatcacct accaccgaga taatggccag ccgttccgtc accgccagcg gctccagtaa
     5221 gccttctttc agttccaggt agaactcttc ctgcattgcc cgttcagctc gcacacagtc
     5281 gctttgtgga acgcagaaac tgatactgta ttcggaagat gattgcgtaa tcagcaccac
     5341 ggaaatacgg gcgcgtgaca ttgcagcaaa gacgcgcgcc gccatgccga ccattccttt
     5401 catccccgga ccagaaacgc tgaacattgc catattattc agattggaaa tgcctttgac
     5461 cggtaattcg tcttcatcac ggctggcacc aatgagcgta cctggtgctt gaggatttcc
     5521 ggtattttta atcaggcaag ggatctggaa ctgggcgatg ggggtaatgg tgcgggggtg
     5581 aagaacttta gcgccgaagt aggaaagctc catcgcttcc tggtaggaca tcgacttcaa
     5641 caacctcgca tcgggcacct gacgcgggtc gcaggtatag accccgtcaa cgtccgtcca
     5701 aatctcgcaa caatcggcgc gtaaacaggc agccagcacc gccgcggagt agtcggaacc
     5761 gttacgtcca agtaccacca gttcgccttt ttcattaccg gaggtgaaac ctgccatcaa
     5821 caccatgtga tcagccggaa tgcggcttgc cgcaatacgg cgggtggact cagcaatatc
     5881 gacggtagat tcgaggtaat gccccactgc cagcagtttt tcgaccggat cgataacggt
     5941 aacgttgtga ccacgagctt ctaacacgcc ggccataatg gcgatcgaca ttttctcgcc
     6001 acggcaaatc agcgcagcgt tgatgctatc cgggcactgc cccaacaaac taatgccatg
     6061 caggacatgt tttatttggg caaattcctg atcgacgaaa gttttcaatt gcgccagcgg
     6121 gaaccccggc tgggcggcgg cgagtcccgt caaaagttcg gcaaaaatac gttcggcatc
     6181 gctgatattg ggtaaagcat cctggccgct aatggttttt tcaatcatcg ccaccaggtg
     6241 gttggtgatt ttggcggggg cagagaggac ggtggccacc tgcccctgcc tggcattgct
     6301 ttccagaata tcggcaacac gcagaaaacg ttctgcattt gccactgatg taccgccgaa
     6361 cttcaacact cgcatggttg ttacctcgtt acctttggtc gaaaaaaagc ccgcactgtc
     6421 aggtgcgggc ttttttctgt gtttcctgta cgcgtcagcc cgcaccgtta cctgtggtaa
     6481 tggtgatggt ggtggtaatg gtggtgctaa tgcgtttcat ggatgttgtg tactctgtaa
     6541 tttttatctg tctgtgtgct atgcctatat tggttaaagt atttagtgac ctaagtcaat
     6601 aaaattttaa tttactcacg gcaggtaacc agttcagaaa ctgctatcag acactctttt
     6661 tttaatccac acagagacat attgcccgtt gcagtcagaa tgaaaagctg aaaaatactt
     6721 actaaggcgt tttttatttg gtgatatttt tttcaatatc atgcagcaaa cggtgcaaca
     6781 ttgccgtgtc tcgttgctct aaaagcccca ggcgttgttg taaccagtcg accagtttta
     6841 tgtcatctgc cactgccaga gtcgtcagca atgccatgac tcgttcgcgt aaagcttgca
     6901 gttgatgttg gtctgccgtt gtgtcacttt tcgtcggttg ttgtattaat gttgctaatt
     6961 gatagcaata gaccatcacc gcctgcccca gattgagcga aggataatcc gccaccatcg
     7021 gcacaccagt aagaacgtca gccaacgcta actcttcgtt agtcagcccg gaatcttcgc
     7081 gaccaaacac cagcgcggca tggctcatcc atgaagattt ttcctctaac agcagcacca
     7141 gttctactgg cgtggcgtag taatgatatt tcgcccgact gcgcgcagtg gtggcgacag
     7201 tgaaatcgac atcgtgtaac gattcaacca gtgtcgggaa aactttaata ttatcaataa
     7261 tatcaccaga tccatgtgcg acccagcgag tggctggctc cagatgtgcc tgactatcga
     7321 caatccgcag ttcgctaaaa cccatcgttt tcattgcccg cgccgctgcc ccaatatttt
     7381 ctgctctggc gggtgcgacc agaataatcg ttatacgcat attgccactc ttcttgacca
     7441 aatgaccgcg aacagggtga tcactgtcaa cttattacac ggtgcgaatt tacaaatcct
     7501 taacgtaagt cgcagaaaaa gccctttact tatcttaaaa aaggctaaac tatttcctga
     7561 ctgtactaac ggttgaattg ttaaaaaatg ctacatatcc ttctgtttac ttaggataat
     7621 tttataaaaa ataaatctcg acaattggat tcaccacgtt tattagttgt atgatgcaac
     7681 tagttggatt attaaaataa tgtgacgaaa gctagcattt agatacgatg atttcatcaa
     7741 actgttaacg tgctacaatt gaacttgata tatgtcaacg aagcgtagtt ttattgggtg
     7801 tccggcccct cttagcctgt tatgttgctg ttaaaatggt taggatgaca gccgtttttg
     7861 acactgtcgg gtcctgaggg aaagtaccca cgaccaagct aatgatgttg ttgacgttga
     7921 tggaaagtgc atcaagaacg caattacgta ctttagtcat gttacgccga tcatgttaat
     7981 ttgcagcatg catcaggcag gtcagggact tttgtacttc ctgtttcgat ttagttggca
     8041 atttaggtag caaacatgca gaccccgcac attcttatcg ttgaagacga gttggtaaca
     8101 cgcaacacgt tgaaaagtat tttcgaagcg gaaggctatg atgttttcga agcgacagat
     8161 ggcgcggaaa tgcatcagat cctctctgaa tatgacatca acctggtgat catggatatc
     8221 aatctgccgg gtaagaacgg tcttctgtta gcgcgtgaac tgcgcgagca ggcgaatgtt
     8281 gcgttgatgt tcctgactgg ccgtgacaac gaagtcgata aaattctcgg cctcgaaatc
     8341 ggtgcagatg actacatcac caaaccgttc aacccgcgtg aactgacgat tcgtgcacgc
     8401 aacctgctgt cccgtaccat gaatctgggt actgtcagcg aagaacgtcg tagcgttgaa
     8461 agctacaagt tcaatggttg ggaactggac atcaacagcc gttcgttgat cggccctgat
     8521 ggcgagcagt acaagctgcc gcgcagcgag ttccgcgcca tgcttcactt ctgtgaaaac
     8581 ccaggcaaaa ttcagtctcg tgctgaactg ctgaagaaaa tgaccggccg tgagctgaaa
     8641 ccacacgacc gtactgtaga cgtgacgatc cgccgtattc gtaaacattt cgaatctacg
     8701 ccggatacgc cggaaatcat cgccaccatc cacggtgaag gttatcgctt ctgtggtgat
     8761 ctggaagatt aatcggcttt accaccgtca aaaaaaacgg cgctttttag cgccgttttt
     8821 atttttcaac cttatttcca gatacgtaat tgatcgtcca ttgtaacttc tttactggct
     8881 ttcattttcg gcagtgaaaa cgcataccag tcgatattac gagtcacaaa catcatgccg
     8941 gccagcgcca ccaccagcac actggttccc aacaacagcg cgctatcggc agagttgagc
     9001 agtccccaca tcacaccatc cagcaacaac agcgcgaggg taaacaacat gctgttgcgc
     9061 cagcctttca ataccgcctg caaataaata ccgttcatta acgccccaat cagactggcg
     9121 attatccatg ccacggtaaa accgatatgt tcagaaagcg ccagcaagag caaataaaac
     9181 atcaccaatg aaagccccac cagcaaatat tgcattgggt gtaaacgttg cgcggtgagc
     9241 gtttcaaaaa caaagaacgc cataaaagtc agtgcaatca gcagaatggc gtacttagtc
     9301 gcccagtccg ttaattggta ttgatcggct ggcgtcgtca ctgcgacgct aaacgcgggg
     9361 aagttttccc agccggtatc attgcctgaa gcaaaacgct caccgagatt attagcaaac
     9421 cagctgcttt gccattgcgc ctgaaaacct gactcgctaa cttcccgttt ggctggtaga
     9481 aaatcaccta aaaaactggg atgcggccag ttgctggtta agggcatttc gctattacgc
     9541 ccggcaggca ccacagaaag atcgccggta ccgcttaaat tcagtgccat attcagctgc
     9601 aggttctgct tccgccagtc cccttcgggt aaagggatat gcacgccctg cccgccttgc
     9661 tctaacccgg taccgggttc aatggtcagt gccgttccgt taacttcagg cgctttcacc
     9721 acaccaatac cacgcgcatc cccgacgcta atcacaataa agggcttgcc taagatgata
     9781 tttggcgcgt tgagctcgct aagacgcgaa acatcgaaat cggcttttag cgttaaatca
     9841 ctgtgccaga cctgaccggt ataaatccct atcttgcgtt cttccacgtt ctgattgcca
     9901 tcaaccatca atgactcagg taaccaaaaa tggataaaac ttcgtttccg ctccacggtt
     9961 ttatcctctt cctgcaccgt ataaagctcg gtcacaggaa tagcgataag cggcccaacg
    10021 agtttttgcg gcccgctggt actttggcga atcgcatctt ccacatcgct acggtaatcg
    10081 gcacgttcga caatcacttg ccgaatcagc attatcggaa tcaacaacag caatactgca
    10141 ccaaacaagg tggtcatttt ccagaacagg ggggatttca acatagtctt ctcctttgca
    10201 atggcagcag gatacgaagg ctatgtggga agaatttgaa gctatgtgaa gtgacggtga
    10261 agtcgaagcg aggccagcac gccaccttcc tgcacgttgc gcagcgtgac ttcgccgtta
    10321 aacaaacggg cgacctcact gacgaacgcc aaccccagac cgctgctttt ttgcccattt
    10381 gcacgcggca aagagtaaaa gcgttcaaaa atacgtgaca gcgcgtagtc aggaatacca
    10441 ctaccggtat ccagcacctt aagggcgacg tgttcctgat ccacttcggc gcttagcgtt
    10501 atgcgaccgc tctcgggggt aaaatcgatg gcgttatcca gtaaattccc cagcgcctgc
    10561 tccagtaacg ccggttcagc agcaacatta acctcagtgg gcataacatg tagagtgatg
    10621 tttttttctg ccaactgcac ggtgcgcgct tcgctgacgc ggcgaaataa tgccgccaca
    10681 tcaacaacag tcagaacgac ttcctgacga ttctccagtc ttgcctggcg tagtaacgtt
    10741 tctaccaatg cctgcatacg cgcattttgc gtcagaatgt tgtcggtaaa acgagccacc
    10801 acttccggtg gcggaccttc gcgtaaaatt tccgccgcgc cacgaatcgc cgccagtggg
    10861 ctttttagct catgggttaa cgcataaaca tactgctcaa tatagttttt cccttccagc
    10921 ttcacgcgca tactttccag cgcctgcgca agcttacgca actcgctact gccgagttca
    10981 ggaagaggaa cgggcttatt gtcagtgacg gaatcggcat agcgagtgag ccgggcaatg
    11041 gagcggttga tccaccaaac catgcctgcg ccaatcacca gtgcaatccc cagcaaaatg
    11101 gcgctggccc ataaaattcg ccgctcgcta cgcttaatga ccggagccat cgccgcgttc
    11161 ggtttgccta cgctcaaaac gccaataagc cgcgagccgt ccataatcgg cgcggcaaca
    11221 tacatcaccg aactttcggg atcggcagga ttttgcaacg tgctgcgcgc accatactga
    11281 ccacgcaacg ttagccagac gtcattccag cgcgaataat cctgcccaac ggctttattt
    11341 gccgaatcga acaatacttt accctgcgaa tcggtcatat agacatgata ttcattgcgc
    11401 actttgttaa tgccaccgat attggcgcga aacggacgat gttgtagctg attaaacgcc
    11461 tgcgccagtt gcccatgcgt tgggtcccca gagagcaaat cgggacgcgc cagctccgcc
    11521 agcaacgttg cggtgtcgat caacgtcccc tccgttgctc ttcgcacgcc cggtttaact
    11581 tctttgacaa aaatagccag tacgaaccag gccgccaccg ccaccagtaa aaaatagccc
    11641 agcagcaacc gcatgccgat acgcattaca ggcccctcag gctatatccc atgccgcgat
    11701 gagtattaat cggtgaaaga tcggggttga tggcacgcag cttggcatgc aacgttttaa
    11761 tgtgggtatc aacggtgcga tcgtaggtgt cctgcgcatc ttcccacacg ctatccatca
    11821 gttgctggcg ggaccagacg cggcctggcg acttgagtaa cgtcttcagc aataaaaact
    11881 cataccgcgt cagcgttaat ggcgtgtcaa accagctgat ctgcgccgcg ggttcattca
    11941 attcaaaatg accaatacgg atgacgggag acggcgacga gaacttcttc acccgacgca
    12001 gtaaggtgcg caccctggcg cacacttcgc ggggtgaaaa cggtttagcc acatagtcgt
    12061 cagcgccaat ttccagccca agcaggcgat cgacctcttc acttcgggcc gtcaggaaca
    12121 gtacaggtaa cgccggatgg agcgccagta actggctgca caattcaaag ccgctgatat
    12181 caggcaaacc aacgtcgaga atcatgacgt cgggaaccag ctggcgagct ttatccagca
    12241 ccggcaagcc tcgctcaaag acctcgacgg caaaaccttc ctgctgcaac atgtagacca
    12301 gcgtgtcggc tatcccttgc tcatcttcca ctaaccagac cgtttcccgt tgtataaatc
    12361 gcctctgtta ttgccgccac ggcatgacag gaaccgcgct aatcgcgttt ttcggcgaac
    12421 cttctacaac tttgtcggag taagccagat aagcgagcgc gttgcgtttg gcgtcataaa
    12481 agcgcacgac ctgtaacgac ttaaagacca gggacgtgcg ttttttgaat actacctcgc
    12541 cctgagcttt gccgttttta atacgatccg acagttcaat cggcccgact tgctgacaag
    12601 aaatagccgc atcggaggta tcttccgcca gacccaatcc ccctttaata ccacctgttt
    12661 tcgcccggct cacataacag gtgacatttt tcacatcggg atcgtcaaag gcttccacaa
    12721 caattttgtg atccgggccg atcattttaa atacggtgtc gaccgaacca atctcttctg
    12781 catgagccaa tggccccagc attatcaggc ttaaagacag gatcaaatgc ttgtatttca
    12841 tattgttacc atttttatct attacacgag caattagttc gtcacggtaa ataacatatt
    12901 gattaagaac aaaatctcaa ttcttttatt tccgtcaagc cctacaacat actctactaa
    12961 gaaaaaaaca ctgaatgcta aaacagcaaa aaatgctatt atccaattac ctgatgtcag
    13021 gtgctcgttg ttgaaaggat gaggatattt tatggatcag gccggcatta ttcgcgacct
    13081 tttaatctgg ctggaaggtc atctggatca gcccctgtcg ctcgacaatg tagcggcgaa
    13141 agcaggttat tccaagtggc acttacagag aatgtttaaa gatgtcactg gccatgctat
    13201 tggcgcgtat attcgtgctc gtcgtttgtc gaaatcggcg gtcgcactac gcctgactgc
    13261 gcgtccgatt ctggacatcg cgctgcaata ccgcttcgac tctcaacaga catttacccg
    13321 cgcattcaag aagcagtttg cccagactcc tgcactttac cgccgttctc ctgaatggag
    13381 cgcctttggt attcgcccgc cgctacgtct gggtgaattc acaatgccag agcacaaatt
    13441 tgtcaccctg gaagatacgc cgctgattgg tgttacccag agctactcct gttcgctgga
    13501 gcaaatctct gatttccgcc atgaaatgcg ttatcagttc tggcacgatt ttctcggcaa
    13561 cgcgccgacc attccgccag tgctctacgg cctgaatgaa acgcgtccga gtcaggataa
    13621 agacgacgaa caagaggtat tctataccac cgcgttagcc caggatcagg cagatggcta
    13681 tgtactgacg gggcatccgg tgatgctgca gggcggcgaa tatgtgatgt ttacctatga
    13741 aggtctggga accggcgtgc aggagtttat cctgacggta tacggaacgt gcatgccaat
    13801 gctcaacctg acgcgccgta aaggtcagga tattgagcga tactacccgg cagaagacgc
    13861 caaagcggga gatcgcccaa ttaatctgcg ctgtgaactg ctgattccta tccgccgtta
    13921 acgctgcagc tcatctaatg caggggcgtc cagatgcgag atgtcccctg cggtttcaac
    13981 gacccagcca gacgccagcc acaggctttc ctgataatcc acgcgcgaaa tagaacagtt
    14041 acgcagacgt aagcggcgcg ctgcccatgc tggtaatccg agaatcgtac tcaccagaca
    14101 tcccagtgca ataccatggc tcaccagcag cggtcggctt ccctgcggta agtcccggca
    14161 agattccagt gccgcattga cgcgatcgct gagctcctgc attgactcgc cttcaggaat
    14221 acgcccgtca acggtgccat tgaccagctg ccgacgccag ttctcttctt cttcggtcag
    14281 agaatcgata tgtctttttt ccagcacacc catgtttaat tcacgcaggc gagaatcaaa
    14341 gatgatgtca cagccgcagg cctgggcgat gatttccgcc gtacgccggg tgcgtcctaa
    14401 atcgctactg ataatatgcg taatgccaag ctctttggca cgggttgcca cctgcatcgc
    14461 ctgttgctca cctttggcag tcagcgggct gtcagactgg ccctgaatac gtcgctcggc
    14521 gttccactgc gtttcaccgt ggcggactag gtatacctgt aacatgcttt ttttccgtat
    14581 actgctgtaa cgttaatttt ctgagtaatg ctgattatgc accaagttgt ctgtgcgacc
    14641 accaatcccg ctaaaattca ggccattctg caggcatttc acgagatctt cggcgaagga
    14701 tcctgccata ttgcatccgt tgccgtcgag agcggtgtac cggaacagcc ctttggcagt
    14761 gaggaaacgc gcgctggcgc acgaaatcgg gtagcaaatg cccgccgttt acttccagag
    14821 gctgattttt gggtggcgat tgaagctggc atcgatggtg acagcacttt cagttgggtg
    14881 gtgattgaaa acaccagcca gcgcggcgag gcgcgttcgg ctactttgcc gttacctgcg
    14941 gtgattctgc agaaagtgcg tgaaggtgag gcgcttggtc ccgtgatgtc gcgttatacc
    15001 ggtattgatg agattggtcg taaggaaggg gcgatcggcg tgtttaccgc cgggaaactc
    15061 actcgcgcca gcgtctatca ccaggcggtg atcctggcgc tgagtccgtt tcacaatgcc
    15121 gtgtatcagg cattgtagga cggataaggc gttcacgccg catccggcat tcggtgcacg
    15181 atgcctgatg cgacgctgcc gcgtcttatc aggcctacaa aatcaatcgc ttttcagcaa
    15241 cacctcttcc agccactggc gcagctccac gggcgcggct ttcaggctgt tagatccacg
    15301 cgtaatcgtc gcgatgcccg cgccgagttc attttttaac tcacgctgac tcatttcgcc
    15361 acgcaacagc tcttcgacaa tacgcacgcg agtccccaac gcttcgcgct catctggcgt
    15421 cagcatcagg tttaacaacg gtaaatggag atcgttttgg taggcattct taagcaggtc
    15481 gacaaaacgt aaccactcct ggtgacgctg ttctgccatc gctgctgaat agggtgattg
    15541 ttgggccata atatgtcgcc attgttagcg ggggaagcaa aatgcctccc ccggttgtac
    15601 tcgctaaaga gtacgatagc atatcataaa cgtgcggatc agtaacgacg tccccattcc
    15661 gtggcgctca tcaacgtcgg tttatccccc atgaaataac ggtagtaagc gtcataagcc
    15721 agcacgttct tcacataacc gcgcgtctcg gagaacggaa tactctcgac aaatgccaca
    15781 gcgtcgatac gcccggcgct gttgccaagc caggttcgca cccgtccagg tccggcgtta
    15841 taagctgctg aggagaaaat acggttattg ccaaactgct gataaacata ttgcaggtaa
    15901 ctggtgccaa tgttgatatt cgtttccgga tccagcaatt gcccagggct gctataacca
    15961 ggaatagaga acatcttcac cgtatgggtc gctgtaccag gcataatctg catcaggccg
    16021 ctggccccta ccggtgattt cactttcgga ttccaggcgc tctcctgacg ggcaatcgcc
    16081 atcgcatagc tttgcgggat ctctttccca ctggtgtaac gtttgaaaag atcgttgtaa
    16141 gccagcggga atcgctcttc cagatgatcc caaagcttcc cggcgatcgt tgcctgaacg
    16201 ctaagatccc accattggtt attgaaagca taccgagcca gttgagcctg ctctgttttt
    16261 gacttgctct tcaccagatt ggcccactcg ctacgcgcgg tgttatcgag attccagtac
    16321 atcaactcgc gcacgcgcgc catctccggc ccctgagtca gggcgctgtc aacattctgc
    16381 ggcgctttat caatcttcag ctcatactct tctccgatgc gttgtgctgc aaccatcggg
    16441 tagaaaccac gctgttgcat gagttgatgc aaaatctctt tcgcttcagc ttcacgtccg
    16501 cgttccagca ataaatccgc ctgccagtaa cgccattcat ctttctcttt tgcttccatc
    16561 ggcagacgcg ccagccaggt attcaggccg cgacgatcgc cggtgccaag tgccattcgc
    16621 acacggcgtt caatcaacga cgtggattgc gagcgcataa tggcgtcatc gcgccatttc
    16681 gcctgctcgt cggtgacatc gttgcccatc aaacgccagg cgacgatatc gcgcagctcc
    16741 tgaatctgat cttcattaag ctgctgcgcc tgggcaagcg acgggatcat cagccgtgca
    16801 ttttcagcat cctgccgcgc cacactggca aacgccaccg ctgccatttg acgggtaaaa
    16861 tcggtcgctc cggttgtacg cgcgaaggtc agtaccgtat tagggttgtt cgccagtgaa
    16921 atgattgccg aggcgatagt ctggtaatcg gcaggcatct gccctgccag cactgttacc
    16981 aggccagtgt tacccgcttt catcgccaga cggatacgct ctaaatacgc cagcggatct
    17041 tgtttacctg acgcacgcca gacgctaaat aacttgtcac aggcgttagg ctggctcttg
    17101 ccggttagcc acagctcttt cgccccttgc caggcttctt cactctgccc ggtgttccat
    17161 ttcgcatagt agtaattaca ttgcgcttcg gtagttccgg gcttttccgg gctaaaggct
    17221 aacaagccac gccagtcttc acgccgcgcc agttcattga cgaaacgaga ttgcagcgtg
    17281 cgagcgggag gaagcgtggg gttagcgcga acaaagttag tgaccgtcac cgccggttga
    17341 ttcatcagat catcggtgat ctggcggtat tccaggtagg gataaagcgg ataatccttc
    17401 agtccaggca tcatttgttc gaccacatcc atttgtcgat tatcccaggc ctgcttgatt
    17461 tgcgcgtaac ggctacgctg ctcatccagt gagtcggctc gcgccacgct gctgaccgtc
    17521 agcagacaga caccggcagc caacagccgc caggtaactt gtttggcttt ttccacaagc
    17581 gcatcctcta agtgtaaata catcaatgca gcgtcatgcc gcgtaataga tttatgctaa
    17641 ccagtcattg ccgtttacgc cacgttacgg acactttttt acttttactg cgaaggtgat
    17701 cgaccaactg ggattaggcg gggaaaaagg ctacacttcg cctttgaaaa ctcatcatca
    17761 cgataaacat agaggcgaag tccaacgtgg ctcaattcgt ttataccatg catcgtgtcg
    17821 gcaaagttgt tccgccgaaa cgtcatattt tgaaaaacat ctctctgagt ttcttccctg
    17881 gggcaaaaat tggtgtcctg ggtctgaacg gcgcgggtaa gtctaccctg ctgcgcatta
    17941 tggcaggcat tgataaagac atcgaaggtg aagcgcgtcc gcagccagac atcaagattg
    18001 gttacctgcc gcaggaaccg cagctgaacc cggaacacac cgtgcgtgag tccattgaag
    18061 aagcggtttc tgaagtggtt aacgccctga aacgcctgga tgaagtgtat gcgctgtacg
    18121 ccgatccgga tgccgatttt gacaagctgg ccgctgaaca aggccgtctg gaagagatca
    18181 ttcaggctca cgacggtcat aacctgaacg tacagctgga gcgtgcggcg gatgcgctac
    18241 gtctgccgga ctgggacgcg aaaatcgcta acctctccgg tggtgagcgt cgtcgcgtag
    18301 cgttgtgccg cctgctgctg gaaaaaccag acatgctgct gctcgacgaa ccgaccaacc
    18361 acctggatgc cgaatccgtg gcctggctgg aacgcttcct gcacgacttc gagggcaccg
    18421 tggtggcgat tacccacgac cgttacttcc tcgataacgt tgcaggctgg atcctcgaac
    18481 ttgaccgcgg tgaaggtatt ccgtgggaag gcaactactc ctcctggctg gagcagaaag
    18541 atcagcgcct ggcgcaggaa gcttcacaag aagcggcgcg tcgtaagtcg atcgagaaag
    18601 agctggagtg ggtacgtcag ggaactaaag gccgccagtc gaaaggtaaa gcacgtctgg
    18661 cacgctttga agagctgaac agcaccgaat atcagaaacg taacgaaacc aacgaactgt
    18721 ttattccacc tggaccgcgt ctgggcgata aagtgctgga agtcagcaac ctgcgtaaat
    18781 cctacggtga tcgcctgctg attgatgacc tgagcttctc gatcccgaaa ggggcaatcg
    18841 tcgggatcat cggtccgaac ggcgcgggta aatcgaccct gttccgtatg atctctggtc
    18901 aggaacagcc ggacagcggc accatcactt taggtgaaac ggtgaaactg gcatcggttg
    18961 atcagttccg tgactcaatg gataacagca aaaccgtttg ggaagaagtt tccggcgggc
    19021 tggatattat gaagatcggc aacaccgaga tgccaagccg cgcctacgtt ggccgcttta
    19081 actttaaagg ggttgatcag ggtaaacgcg ttggtgaact ttccggtggt gagcgcggtc
    19141 gtctgcatct ggcgaagctg ctgcaggttg gcggcaacat gctgctgctc gacgaaccaa
    19201 ccaacgacct ggatatcgaa accctgcgcg cgctggaaaa cgccctgctg gagttcccgg
    19261 gctgtgcgat ggttatctcg cacgaccgtt ggttcctcga ccgtatcgcc acgcacatcc
    19321 tggactacca ggatgaaggt aaagttgagt tcttcgaagg taactttact gagtacgaag
    19381 agtacaagaa acgcacgctg ggcgcagacg cactggagcc gaagcgtatc aagtacaagc
    19441 gtattgcgaa gtaatgcgta aaatgccgga tgcggcgtga acgccttatc cggcctacaa
    19501 accaagaaat ttcaatacgt tgtgaatctc caggcctgat aagacgcggt aagcgtcgca
    19561 tcaggcattg agcaccgaat gccggatacg gcgtgaacgc cttttccggc ctacaatagc
    19621 cttagtatcc gcaatttcgt agcgggtcac ccgtgctgat tcttttaaac cttgtttaat
    19681 ctcgacagcc tcttccagag aggttttcaa ctcatcaaaa aacttatttt atacctcgcc
    19741 tttgagccgt ttcatcgcgg ttatctctgc tcccccatca tctcccgcac cagctccacg
    19801 cagcgcagga aacggctgtc ataatcgtcc tcttcaaccc gcacgaattc gatattgttc
    19861 tcttccagca tctccaccag caagttctgg aactctttgc gatccaccga actgccgagg
    19921 ctgcgtaaac catccgccac ccacggcgtg ttgttctcca gcaggatcac cagatcgaaa
    19981 cggtattcat caatcaacgc ctgtacgaac ggatgctcac gcccttcgta ctttttgcag
    20041 aacgcctggg tagtgacaaa atcagtgtca ataaacgcca ctttattggc atatttcact
    20101 gcaaaatcaa tgtattgtgc gtggcccagc gcgattttat cgtaatcgga atactgcaat
    20161 gcgatctcat caccgccgag gtgtgaaaag acataatcgc gaccatattc ccacgcactg
    20221 gtggtattga agatattggc aagtttgttt accagggtgg atttaccgct cgactcgcca
    20281 ccaaggatcg ccacggtacg tacaaagaac ggcttcactt ccgtaggaat atattcccag
    20341 tagcggaacg ggttttcgcg gatctgcgca ccgctgatac tcataaaggt acgtttcgga
    20401 tcgaccagca ccgtatcgat ccccagatgt tccatatact gtggcgcatc ggcttcttcc
    20461 gaggtgtaga tcaggtccgg ctgaatcccc ttttcagcca taaacttttt gatgccgttg
    20521 ctccacacat cccagccgtg cggatacggc tccatgccct cctcgttgaa agcatgaatg
    20581 cgaatatttt tctgatattt aaaagtttgt aataaccagc gtagacgatc cggcaccgtg
    20641 ggctgctgcg acatggcgct gtcttcaaac aacgcgcggt cgcgggtatc gtcaaaaccc
    20701 ataatgatat gcagctcgtc aacctggcta caggcgcgct ggataaggta gatatgtccg
    20761 gtatgcagcg ggtagaactt accgaatacg acaccaatgg ttttcttctg tcggggaaat
    20821 tcaagcccca aaaaacggtg caacgcctcc agcttttgcg cgctggggct tttaattttg
    20881 gcattcagta actggcttaa ataccctttg gtcataccgc tggcatcagc tacctgctgt
    20941 agcgtgcagc cctgttgctt gatggcagtt ttcaggtaat caaatgacga catatctccc
    21001 tccgtatctc tcattataag tcgtcgaaca cgctaagcgc gtcggagagt tttttaacgc
    21061 caaaaatctg catcccttcc ggcgcttttt tcggtacgtt agccgccgga acaatcgccc
    21121 ggcgaaaacc gtgtttcgcc gcttctgaaa ttcgttcctg accgctgggc accgggcgga
    21181 tctcccctgc cagcccgact tcaccaaaca ccaccagatc ctgtggcagc ggtctgtcac
    21241 gcaggctgga aaccatcgcc agcagtaacg ctaaatcggc actggtttcg gttaccttca
    21301 cgccgccgac cacgttcaca aatacatcct gatcggccat ttgcagacca ccgtgacggt
    21361 gcaagacagc cagcaggatt gccagacggt tttgttccag ccccactgcc acgcggcgcg
    21421 gattcgccat catcgagtga tcgaccagcg cctgaatctc caccagcaac ggacgcgttc
    21481 cttcccacac caccatcacg gagctgccgg aggtcacttc atctccgcga cttaagaaaa
    21541 ttgccgaagg gttgctgact tcacgcagcc cctgttcggt catcgcgaag acgcccagct
    21601 cattcaccgc gccgaagcgg tttttatggc tgcgcaaggt gcgaaaacgg gagtcggcat
    21661 caccatccag aagcaccgaa cagtcgatac agtgttccag cactttaggg ccagccagcg
    21721 agccatcttt ggttacgtgc ccaaccatga caatcgccac accgcgcgtt ttggcgaagc
    21781 gcgtcagata agccgccgtt tcacgcacct gcgccacgct accaggcgat gattgtacat
    21841 ccgccatatg catcacctgg atcgagtcaa ttaccatcag tttcggttgc tcttcttcgg
    21901 caatcaggca gatctgttcg atgctggttt ccgacaacat attgagattg tcagtcggca
    21961 ggccaaggcg atgagcgcgc attgccacct gttgcagcga ctcttcgcca gtgacataca
    22021 gcgttttcat ctgctgggcc agtttgcaca gcgtttgcag tagcagcgtg gatttccccg
    22081 cacctgggtt accgccaatc agaatggcgc ttcccggcac cacgccgccg cctagtacgc
    22141 ggtcgaactc tttaaatccg gtggaaaaac gcggcagctc ttcaaggctg atatcggaga
    22201 gtttctggac ttttgccacc ccggcgctac cggcatagcc gctgagacgc tcgttacgcg
    22261 ccaccgttgg cgacgcagca agacgcacct cggtgatggt gttccaggca tgacaggcac
    22321 tgcactgccc ctgccagcgc ggataatcgg ccccgcattc attacaaaca aaggcgcgtt
    22381 ttggagcttt tgccacggtg tacctcgtta atgctgtgcc gcccgcagga tggcgggcga
    22441 gcaattactt ctgattcagg ctgccagaga ggatgcagaa tacccccatc aggtcagcgt
    22501 gacggatggt gacttccgcc ttttcattca cttttggctt ggcatggtag gcaatcccca
    22561 gccctgctgc tttgatcatc ggcaggtcat tagctccatc gccaatcgcc acggtctgcg
    22621 ccagcgggat ttcatactcc tgcgcgaggc gagtcaaagt tttcgctttg tactgcgcgt
    22681 ctacgatgtc gccgatcaca ttgccggtaa atttaccgtc catgatctcc agttcattgg
    22741 ctaccacggc ggtcaggcgc agcttgtcgc gcagatattc agcaaagaaa gtaaagccgc
    22801 cggaggcaat cgccactttc cagcccagcg tttccagctt gagcaccagt tgcgttaagc
    22861 ctggcatcag cggcagattt tcacgcacct gttgcagaat attggcgtca gcgcctttca
    22921 gcgtcgccac acggctgcgc aggctggcgg taaaatcgag ttcgccgcgc atcgcccgtt
    22981 cggttacttc cgccaccatc tcgcccgttc cggccagttt ggcaatttca tcaatacatt
    23041 caatctggat ggcggtggaa tccatgtcca tcaccagcaa acccggcgtg cgcaggtgcg
    23101 ggattttccc cagcggggcg acatccagtt gcgcttcatg ggccaggcgc gtagcccgtg
    23161 cggtgagtga acctgccaga cgaatcacct gataatcttc cacgcaccag gcggcaacaa
    23221 tcaccatcgc cgcacccagt ttgctctggt attgggtcag acgctgttta tccagcccac
    23281 gaccatacag cagccagccg ctacgacctg cgtggtaatc cagtggcatc acttcatcac
    23341 cacttaatga aagaggcaga ccaggccata aagagacatc ttcaggcagg tcgcaccagg
    23401 taatgttagg cattaaggat cctgtaaaat cgttcgaagc agggaaaata acgcatgagg
    23461 ctaccttgta tccattgctt ctggcaacat taagtctcaa attttcaaag ggtggaagat
    23521 ggctcgcaca aaactgaaat tccggctgca tcgggcagtg attgtcctgt tctgtcttgc
    23581 cttgttagtg gcgctgatgc agggagcgtc atggtttagt caaaaccacc agcgacaacg
    23641 taatccacag ctggaagaac tggcccgcac cctggcgcgt caggtaacgc tgaacgttgc
    23701 accgctgatg cgtaccgact caccggatga aaaacgcatt caggcgatcc tcgatcagtt
    23761 aacggatgaa agccgtatcc tcgacgcggg tgtgtatgac gaacaaggcg atcttatcgc
    23821 acgttctggc gaaagcgtcg aagtgcgcga ccggctggcg ctcgacggta aaaaagcggg
    23881 cggctatttt aaccagcaga ttgtcgaacc aattgccggg aaaaacggac cgctcggcta
    23941 tctgcgcctg acgctcgaca cccatacgct cgccaccgaa gcccaacagg tggataacac
    24001 cactaacatt ttacgcctga tgttgctgct ttcactggca atcggcgtag tgctgacccg
    24061 cacgctgcta cagggtaaac gtacccgctg gcagcaatcg cccttcctgt taaccgccag
    24121 caaaccggtg ccggaagagg aagaaagcga gaaaaaagag tgacccatta ctacaagaaa
    24181 ggaaatcgtt atgtccacat tacgcctgct catctctgac tcttacgacc cgtggtttaa
    24241 cctggcggtg gaggagtgta tttttcgcca gatgcccgcc acgcagcgcg ttctgtttct
    24301 ctggcgcaat gccgacacgg tagtgattgg tcgcgcgcag aacccgtgga aagagtgtaa
    24361 tacccggcgg atggaagaag ataacgtccg cctggcacgg cgcagtagcg gtggcggcgc
    24421 ggtgttccac gatctcggca atacctgctt tacctttatg gctggcaagc cggagtacga
    24481 taaaaccatc tccacgtcga ttgtgctcaa tgcgctgaac gcgcttggcg tcagcgccga
    24541 agcgtccggg cgtaacgatc tggtggtgaa aaccgccgaa ggcgaccgca aagtctcagg
    24601 atcggcctat cgcgaaacca aagatcgtgg cttccaccac ggcaccttgc tgctcaatgc
    24661 cgaccttagc cgcctggcaa actatctcaa tccggataaa aagaaactgg cggcgaaagg
    24721 cattacctca gtgcgttccc gcgtgaccaa cctcaccgag ctgctgccgg ggatcaccca
    24781 tgagcaggtt tgcgaggcca taaccaaggc ctttttcgcc cattatggcg agcgtgtaga
    24841 agcggaaatc atctccccgg acaaaacgcc agacttgcca aacttcgccg aaatctttgc
    24901 ccgtcagagt agctgggaat ggaacttcgg tcaggctccg gcattctcgc atctgctgga
    24961 tgaacgcttt agctggggcg gcgtggaact gcatttcgac gttgaaaaag gccatatcac
    25021 ccgcgcccag gtgtttaccg acagcctcaa ccccgcgccg ctggaagccc tcgccgggcg
    25081 actgcaaggc tgcctgtacc gcgcggatat gctgcaacaa gagtgcgaag cgctgttggt
    25141 tgacttcccg gaccaggaaa aagagctacg ggagttgtcg acgtggatag cgggggcggt
    25201 aaggtaactc gctgattaaa ataccaaagg aagggaatat gatcgatctg gaaaaccagg
    25261 agcgggagat tatcaattta atgttaagcc agcgtatttc ctggctagcc gccgtgcgta
    25321 tcaggcataa attatcgctt gctgaagtaa gtaaaatgtt aggtatctcg attaattctc
    25381 taaaatagat cgaaaagacg gaacggttta gctcaaacat caaaagcaaa atggcagaaa
    25441 tttatggttg tccaccagag ttgctgatat gcccttcctg gatgacggct gaacataaat
    25501 gaatagatt
//
LOCUS       DADKRT010000042        25258 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.042, whole genome shotgun sequence.
ACCESSION   DADKRT010000042 DADKRT010000000
VERSION     DADKRT010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25258
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.042"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            108..455
                     /gene="grxD"
                     /locus_tag="JQ356_001463"
     CDS             108..455
                     /gene="grxD"
                     /locus_tag="JQ356_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin 4"
                     /protein_id="HAY4621607.1"
                     /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG
                     ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
                     TAAKYKSEEPDAE"
     gene            complement(506..4913)
                     /locus_tag="JQ356_001464"
                     /pseudo
     CDS             complement(506..4913)
                     /locus_tag="JQ356_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416170.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
     gene            complement(5006..5653)
                     /gene="rnt"
                     /locus_tag="JQ356_001465"
     CDS             complement(5006..5653)
                     /gene="rnt"
                     /locus_tag="JQ356_001465"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HAY4621608.1"
                     /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRSAVSEYEALHEIFKV
                     VRKGIKASGCNRAIMVAHNANFDHSFMIAAAERASLKRNPFHPFATFDTAALAGLALG
                     QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
     gene            complement(5756..6163)
                     /gene="gloA"
                     /locus_tag="JQ356_001466"
     CDS             complement(5756..6163)
                     /gene="gloA"
                     /locus_tag="JQ356_001466"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HAY4621609.1"
                     /translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
                     VKGGTTVIAFMEDPDGYKIELIEEKDAGRGLGN"
     gene            complement(6244..7341)
                     /gene="nemA"
                     /locus_tag="JQ356_001467"
                     /pseudo
     CDS             complement(6244..7341)
                     /gene="nemA"
                     /locus_tag="JQ356_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416167.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-ethylmaleimide reductase"
     gene            complement(7378..7977)
                     /locus_tag="JQ356_001468"
     CDS             complement(7378..7977)
                     /locus_tag="JQ356_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY4621610.1"
                     /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS
                     FYHYFRSKEAFGVAMLERHYTAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT
                     ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA
                     QVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV"
     gene            8080..8319
                     /locus_tag="JQ356_001469"
     CDS             8080..8319
                     /locus_tag="JQ356_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HAY4621611.1"
                     /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSD
                     GEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF"
     gene            8368..9264
                     /locus_tag="JQ356_001470"
     CDS             8368..9264
                     /locus_tag="JQ356_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HAY4621612.1"
                     /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD
                     RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
                     TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
                     NDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
                     TLKMTRQQWFRIRKAALGYDVP"
     gene            9345..9866
                     /gene="sodC"
                     /locus_tag="JQ356_001471"
     CDS             9345..9866
                     /gene="sodC"
                     /locus_tag="JQ356_001471"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HAY4621613.1"
                     /translation="MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTIT
                     ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE
                     GPEGAGHLGDLPALVVNNDGKATDAVITPRLKSLDEIKDKALMVHVGGDNMSDQPKPL
                     GGGGERYACGVIK"
     gene            complement(9867..11474)
                     /locus_tag="JQ356_001472"
                     /pseudo
     CDS             complement(9867..11474)
                     /locus_tag="JQ356_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004016165.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
     gene            complement(11555..11864)
                     /locus_tag="JQ356_001473"
                     /pseudo
     CDS             complement(11555..11864)
                     /locus_tag="JQ356_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011378749.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11878..12735)
                     /locus_tag="JQ356_001474"
     CDS             complement(11878..12735)
                     /locus_tag="JQ356_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310380.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY4621614.1"
                     /translation="MSIKTIKYFSIIIVAIVAVLAGWWLWNYYMQSPWTRDGKIRAEK
                     VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN
                     NEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSG
                     WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT
                     LRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSG
                     TTCSIAVGQ"
     gene            complement(12801..12974)
                     /locus_tag="JQ356_001475"
     CDS             complement(12801..12974)
                     /locus_tag="JQ356_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HAY4621615.1"
                     /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
                     RGWIYAGDIWHPL"
     gene            13175..13609
                     /gene="slyA"
                     /locus_tag="JQ356_001476"
     CDS             13175..13609
                     /gene="slyA"
                     /locus_tag="JQ356_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416159.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HAY4621616.1"
                     /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP
                     PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE
                     MEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG"
     gene            complement(13656..14123)
                     /gene="slyB"
                     /locus_tag="JQ356_001477"
     CDS             complement(13656..14123)
                     /gene="slyB"
                     /locus_tag="JQ356_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HAY4621617.1"
                     /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
                     QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
     gene            14397..15506
                     /gene="anmK"
                     /locus_tag="JQ356_001478"
     CDS             14397..15506
                     /gene="anmK"
                     /locus_tag="JQ356_001478"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HAY4621618.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
                     KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
                     HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT
                     ERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
                     VIRPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
                     TISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAF
                     AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP"
     gene            15604..15933
                     /gene="mliC"
                     /locus_tag="JQ356_001479"
     CDS             15604..15933
                     /gene="mliC"
                     /locus_tag="JQ356_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
                     /protein_id="HAY4621619.1"
                     /translation="MSMKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTV
                     KLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNC
                     QLQNPQR"
     gene            15992..16648
                     /gene="pdxH"
                     /locus_tag="JQ356_001480"
     CDS             15992..16648
                     /gene="pdxH"
                     /locus_tag="JQ356_001480"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HAY4621620.1"
                     /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
                     AKLADPTAMVVATVDEHAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
                     FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
                     "
     gene            16777..18051
                     /gene="tyrS"
                     /locus_tag="JQ356_001481"
     CDS             16777..18051
                     /gene="tyrS"
                     /locus_tag="JQ356_001481"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HAY4621621.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
                     DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
     gene            18113..18973
                     /gene="pdxY"
                     /locus_tag="JQ356_001482"
     CDS             18113..18973
                     /gene="pdxY"
                     /locus_tag="JQ356_001482"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HAY4621622.1"
                     /translation="MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHT
                     QYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAA
                     NPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNV
                     EEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQP
                     VGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK
                     PEHYFSATKL"
     gene            complement(19017..19622)
                     /gene="gstA"
                     /locus_tag="JQ356_001483"
     CDS             complement(19017..19622)
                     /gene="gstA"
                     /locus_tag="JQ356_001483"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HAY4621623.1"
                     /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF
                     AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA
                     TELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNETLKDEHWICGQRFTIADAYLFT
                     VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK"
     gene            complement(19728..21230)
                     /gene="dtpA"
                     /locus_tag="JQ356_001484"
     CDS             complement(19728..21230)
                     /gene="dtpA"
                     /locus_tag="JQ356_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HAY4621624.1"
                     /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
                     IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY
                     RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
                     VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
                     ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
                     LMSLEVYGRVFLQIGVATAIIAVLMLLTAPKLHRMTQDDAADKAAKAAVA"
     gene            complement(21841..22476)
                     /gene="nth"
                     /locus_tag="JQ356_001485"
     CDS             complement(21841..22476)
                     /gene="nth"
                     /locus_tag="JQ356_001485"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HAY4621625.1"
                     /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
                     VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
     gene            complement(22476..23171)
                     /locus_tag="JQ356_001486"
     CDS             complement(22476..23171)
                     /locus_tag="JQ356_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HAY4621626.1"
                     /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG
                     ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAA
                     AERALPNGETGNV"
     gene            complement(23175..23795)
                     /gene="rsxG"
                     /locus_tag="JQ356_001487"
     CDS             complement(23175..23795)
                     /gene="rsxG"
                     /locus_tag="JQ356_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HAY4621627.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA
                     LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
                     AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
     gene            complement(23799..24857)
                     /gene="rsxD"
                     /locus_tag="JQ356_001488"
     CDS             complement(23799..24857)
                     /gene="rsxD"
                     /locus_tag="JQ356_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HAY4621628.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL
                     VQILLASVSTLLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
                     VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ
                     VIFSGHTASGADMNTLHLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA
                     GWQWVNLAWLAGGLWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLS
                     GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
     gene            complement(24858..>25258)
                     /locus_tag="JQ356_001489"
     CDS             complement(24858..>25258)
                     /locus_tag="JQ356_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707529.1"
                     /note="part of membrane-bound complex thought to be
                     involved in electron transport to nitrogen; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HAY4621629.1"
                     /translation="NAEPEEQVDPRKAAIEAAIARAKARKLEQQQANAEPEEQVDPRK
                     AAVEAAIARAKARKLEQQQANAVPEEQVDPRKAAVEAAIARAKARKLEQQQTNAEPEE
                     QVDPRKAAVAAAIARAQAKKAAQQKVVNED"
BASE COUNT         6264 a         6518 c         6581 g         5895 t
ORIGIN      
        1 aaagggataa aatagcaaaa gcgtgatgaa aatgttattt tccgatgccg cactgacccg
       61 ctacaatgtc agattactgc cgtaaagaag tttgaggaag caagacaatg agcaccacta
      121 tcgaaaaaat ccaacgccag attgctgaaa acccgatcct gctgtacatg aaaggttcac
      181 cgaaactgcc gagctgcggt ttctctgccc aggcagtcca ggcgcttgcc gcatgtggcg
      241 aacgttttgc ctatgttgat attctgcaga atccggacat tcgtgcggaa ctgccgaaat
      301 atgctaactg gccgaccttc ccgcaactgt gggttgacgg cgagctggtc ggcggttgtg
      361 atatcgtgat cgaaatgtat cagcgtggcg aactgcagca gctgatcaaa gaaactgccg
      421 ctaaatacaa gtctgaagag ccggacgcgg aataatccgt cctgcaatac tgacggatgc
      481 gaacgggcat ccgtcagtcc tttctctatc cccaatccag cccttgtggc gaacttgaaa
      541 atcccgcctc acgcagcagc gtaaacatcg gcgtttgccg gaccggtaga tcattcactt
      601 ctgttagcgt aaagcgcagc cgtggttcgc gacgcagtgc ggtagtcagc gcgtggaaaa
      661 cctctggggc ttttcctgcc agaccagcat ttttttgcca ccttgcgcca gatagagtaa
      721 caatttgccg ctagaaacga ccaccagcgc acccgcccga cgcgttggaa ccagcgttgc
      781 cggatgtgca ggccagggca gaagatttcc ccacacatta gccggatcgt tggcagagag
      841 cgccactggt gtatagtggc gcgtttgcgt ggcttgtgtc gccagatcgc gccatcggtc
      901 aatagtcaga cgttcagcga attgcgcgcc acccagacct tctacaaaac gacctcgcat
      961 aattcgcccg gagtcttcca tacttcgaca aagcgtttgc atcgatggaa acccgccagg
     1021 gatattttcg gctatcaccg cctgacgact gatgatgccg tagcggtcga gcatattttc
     1081 cgccagcgcc agcatccttt cggtatcgtt tagtggctcc acctgcaata acgaccagcg
     1141 tccagccaga tttggtgtgt tgtaagatac cagcggcgag acgggttgcg catagacagg
     1201 acgtccacga cgagcccggt gactgcggcg agttgaggtg cgtgcgttgg aactgctgcg
     1261 ggtgagggcg cgtaacggtg cccaaatgtc gctggtgatg acgccttgcc agaccagcgc
     1321 ccataacgcc tcttgcaggg cagagagatc aaccgattcg ccgattttgt cgcgtatccg
     1381 ttggctgatt tgttgtgcaa accaggctcc tccgtcagcc agaacagcga ctatcgcttg
     1441 ttgcagcgcc gaacgattcg cctgatccgc ttcggcagga gtgaacgatt ctgcagcata
     1501 ttcctgtaga tgcagtgcca ccaggccgtc atcttcaccc agtttttttt gccccgacca
     1561 gataaccgca ccggttgcca gtaattcatc gagcatttct gacgaatagt cgcgtacgcg
     1621 ggcaggcagg atctggcttt cccagagtga ggcgggtaaa ccgactccgg caagctgttc
     1681 gatcacccgc atcacgccat ctacgccctc ataaacgcct ggcgatgttg aggcaaagag
     1741 cgccgggcta ccatcggtgg cgggtaatac gccctgacgt tccagcagca atcgcgcata
     1801 ggtcgtggct gcaacgggac gcgtcgcttc tctggcggct tgcagcgagc gcaaacgcag
     1861 acgacgaaat acttcatcgc tcacccagat gtcttgttgc agattcatca ccagaccctg
     1921 ttcacgcagt tgctgaagct gctcttcgac aatggcaata ccgagactaa actcatgagc
     1981 cagttgttca gccgtgacca gagcatgagc ccggagatag cgcagaaaga ggtcgcgaag
     2041 cgggtaactg actctatgta aataaatctc tggcaatgac tctggtagtc gtacgccgag
     2101 ggcatcacgc agcctggcgg catcatccat acaggcaaga cgctcctgtc cgctaatcat
     2161 cgctgggaag attcgtttta ctgcaagaag attttccaga tacgacgcaa cctcttcact
     2221 gctgcctgta tgccgttgcg ccaggtcttc aacggtcatt ggccccagtt cgcgcagcag
     2281 gtcgaacaat ccttcttcac ctttcgctct tctgccagga gccagtcgtt gcaactcttc
     2341 ttccacctgg cgaatgacct gcgggtcgag taattccccc ggatcgacct gtccgagtag
     2401 attgcgcagt aactcgctgt ccagcgacag tacggatgcc cggcgctctg ccagcggggc
     2461 gtcgctctgg tacataaatt ccgcgacata gccgaacaat aaacttgtgg cgaaaggcga
     2521 gggcgtagtg gtcgttacat cggatatttg aatttcgcca ccgttcaggc gacgcatcaa
     2581 acgttccagt gcgggaagat cataaacatc ttgcagacat tcgcgtagga tttcgagaat
     2641 gaccggaaaa tctggatatc cctgagcgat ttccagcaac tgactggcgc gcagccgttg
     2701 ttgccaaagc ggggtgcgat ggcccggagt gcgccccggc attaataatg cccgcgcggc
     2761 gcattcgcga aaacgggcgg cgaaaagtgc cgagctgcct accgcctcgc ggacaatttg
     2821 cagcaacttt tctggttcaa acaaaaaaat cgcggcgtcg ggcaatttac catcagtgtc
     2881 aggaatgcgc gcaacaatgc cgtcatcact ggcgaccaca gacgcgtcag cgcccagggt
     2941 tcatgcaccc gtcttccata gggagagtgc aaaataatac gccagtcgcc aatttcatca
     3001 cggcaccgtt cgaggaccag atggcgactc cccggaacga tgcccgtcgc gttgcgttgc
     3061 tcgtcaatca acccctgaat attggcgttc gtattttctt ctgccagcca cgggggaata
     3121 gtcccggaaa agaacgcgcc atccgccagt aaatgaagaa aatcgccgat catctcgcct
     3181 aattcagccg gacgtccgtt accttcacca cgccagaagg ggagccgggc agaacgaccc
     3241 ggagcaggag tcacaatcac ctgatcgcgg gtgatttgct ggatccgcca tgaggtagcg
     3301 ccgagagtga taatgtcgtt cacccgcgac tcatatacca tctcctcatc cagtttaccc
     3361 acccgccgcg aaccggcctt ttcttcacct tcgggtaata acacgctata catgccacga
     3421 tccggaatgg tgccgccgct ggtaaccgcc aacaattgag cgccaggtcg gacggtcaat
     3481 atcccggtct ccctgttcca gaccagtttg gggcgaaaag cagaaaaatc gccagaggga
     3541 tagcgcccgg aaagcatatc cagcgtggcg tcaaaaacac gtcttggcag atctttccac
     3601 ggtgcggcac ggcgtacgcg ggagtaccat tcgtctacct gtaatgcctc catcgccgcg
     3661 gcggcaacgg tttgctgcgc aaggacgtcg agtggattat gcggcggtgt caggttttcc
     3721 agcctgcctg cgaacataca ctctacaatg actgcggaat cgactaagtc acgccgggta
     3781 cgagggaaaa acagcccttt agatacaccg ccaacctgat gtccggcgcg accaatgcgt
     3841 tgtaacccac tggcaacaga aagcggcgtt gccacctgaa tcaccagatc cactgcgcct
     3901 atatcaatcc ccagttcgag actggaggtt gcgaccacgc agcgtaactc acccgatttc
     3961 agcgcctgct cggtgattgc tcgttgttct ttagagacgg agccgtggtg tgagcgggca
     4021 ataaaaacgt cgctactttg tacacggtta gaggttgcgc cggaggtcga ctcgaaatgg
     4081 gccgcatcaa cggcgataga cggggaacgc tgtaagcgtg cggcgtaaag ctcatttaat
     4141 cgtgccgtca gtttttccgc cagcccacgt gaattagtaa agacaatggt cgagcgatgg
     4201 cgcaacactt catcaaggat acccgtttca atatatggcc agatggagcc ttcccggccg
     4261 gcatggctgt cttcgccggt gctgctggcg accgatgaga catcatccat attggcgacc
     4321 ggtacgacaa ttcgtatctg cggatggcgc attgcgggcg ggttgactac cgtaaccggg
     4381 cgatcgccac caagaaaggc tgccacatcg ctggctgagc gcacagtggc agaaaggcca
     4441 attcgctgtg ctgaggtgtg gagcagcgca tcgagccgct ccagacttaa cgccagatgc
     4501 gcaccacgtt tactgcccgc taccgcgtgg acttcatcaa taattaccgt ttcgccgcgc
     4561 cgccgccgtt catcggcaat acccttcaac gggagctgca agttgcgctg aacgtcggtg
     4621 cccagagctt ttatcggtga aatatagagg atgcgtgagg ttttacgctt atgcgcctcg
     4681 cgggtatctt cgccgccttc gcggaagagc cgatcgaggg cgtagagaaa tgctgccagc
     4741 gttttcccgg agccggtcgg tgcaatcacc agcgcatgtt cgcttcgcgc cgccacatgc
     4801 caggtttgcg actggacagc ggtcggctgt ttaaaggcgc gaagaaacca gtcgcgggtc
     4861 gccggtgaaa acacgtccgg caggagcgat gaagggtctg gattatctgc cattaacgct
     4921 attccccgtg aatatcatgc aggatgcgtg gaatagcctc actatagatg cctgaatcat
     4981 tgcatgtcat caggcatcga ctcgattaca cctcttcggc ggcaggtagc ggccagcctc
     5041 ccagacgttt ccagcggttg acgatttcac aaaacagcac agcagtgcgt tcggtgtcgt
     5101 acagcgcgga gtgcgcctgg gtgctgtcga agtccatgcc agcggtctgg caagcctttg
     5161 acaatacggt ttgtccgagt gccagcccgg ccagtgcagc agtgtcaaaa gtggcgaaag
     5221 ggtggaacgg gttacgtttc agtgaggcgc gttctgcggc ggctatcata aagctgtgat
     5281 caaaattggc attgtgcgcc accataatgg cgcggttaca gccgctcgct ttaatacctt
     5341 tacgtacaac tttaaaaatt tcgtgcagcg cctcgtattc gctgaccgcg ctacgatcgg
     5401 gatcgttcgg gtcaatgccg ttgaaggcga gggcttctgg ttgcaaattt gcgccgacaa
     5461 atggttcgac gtggaaatgt aatgtggtgt ccggcatcag ccagccttgt tcatccattt
     5521 tcagggtgat ggcggcaatc tcaagcagcg catcggtttt ggcgttaaat ccggctgttt
     5581 caacatcgat cacaacagga taaaaaccac gaaaacggtc gcacagaccg gtaagttgag
     5641 cgttatcgga catctgattc tcttaatacg gataaattgc agcgcgcatt atgacaaata
     5701 ttacttgtcg atgcagtaaa gatgcgggcg cgatgagttc acgcccggca ggagattagt
     5761 tgcccagacc gcgaccggcg tctttctctt cgattaactc aattttgtaa ccgtccggat
     5821 cttccataaa cgcgataacc gtagtaccgc cttttaccgg acccgcttca cgggtcacgt
     5881 tacccccgtt ttgacggatt ttttcgcacg cttcagcggc gttatctacg ctaagcgcga
     5941 tgtgaccata agcagtgccg agttcgtatt tatccacgcc ccagttgtag gtcagttcaa
     6001 tcaccgcttc ttcggtttcc gggccgtagc caacaaacgc cagtgagtat ttgtattccg
     6061 ggttttcgct ggtacgcagc agtttcatgc ccagcacttt ggtataaaaa tcgatggagc
     6121 gttgcaaatc gccaacgcgc agcatggtat gaagaagacg catcttttta tcctcaaaat
     6181 ggctaacaga ttcaaaatgt tgttttagta tagcggcggc tttacgccgc tcgcaatgtt
     6241 ggattacaac gtcgggtaat cggtatagcc ttccgcgccg ccaccgtaga aactttcggc
     6301 acgctgtggg ttaagctcag ctttgcgctg caagcgggcg accagatccg ggttcgcaat
     6361 ccagtcacga ccaaatgcca ccgcatcaat taaccctttg ccgatcagcg tttcagcttt
     6421 ttctactgtg tatgcacctg cgccgataat cggaccgtgg aaacgggcgc gtactttttc
     6481 gcggaacgca tcagtatacg gttcaccccc cgcccaatct ggttctgaca tatgcagata
     6541 agcaatgccg cgtttaccca gttgttcaat cagatacagt gcatcggctt cttcattcgg
     6601 gccgttatcc gtgttctgga aagtaccgat tggcgaaatg cgaatgccaa tgcgatcggc
     6661 accccattct tcaatcccgg catcgaccac ttccagtacc agacgtgcgc gattttccac
     6721 gctgccgccg tactgatcgg tacgatggtt tgaagaagga gaaaggaact gatgcagcaa
     6781 ataaccgtga gcagagagga gctctaccag atcaaaaccg gcttcacgcg cgttagcaat
     6841 ggcctgacgg aaatcattga cgatacctgg aatctcttct agttcaagcg cacgcggcat
     6901 ggatgtttca acacggatcg cctgaccatt ttcatcgcgc agagaagtac gtgttcccgc
     6961 gctaagtgct gaaggcgcta ccggtgcctg accgccaggt tgcaggctgg cgtgagaaat
     7021 gcgtccggtg tgccacagct acacggccat atgaccattt tcagcatgaa cgccagcggt
     7081 gatttttttc catgcggcaa tttgctccgg actatggatg ccaggcgcac ctgcatatcc
     7141 ttttacctgg gcagaaattt gcgtggcttc actaataatc aaaccggcac tggcacgttg
     7201 gcgatagtat tccgccatca acggggtagg aatgtcaccc ggttcaatac tgcgcagacg
     7261 cgtcagcggt gccataaaaa tacggtttgc cgccgtgatc gcgcccactt tcagtgggga
     7321 atacagtttt tcagatgaca taaaggctcc cggtcgtctg gtgataaaaa atgcctgcta
     7381 aacggcaggc gtcgcaataa tgttttttac atgggccagc gcgttttcca gtggctcgaa
     7441 actgcgcgaa attttggcct gcagattcgc acccagccat agtgcgtaaa gcacttgtgc
     7501 ctgttgtagc ggttcgccac aaaaggttaa acaatggttc tcacggccat tttccagcgc
     7561 ctgagagagc agggcgatca cgccgcgagc acctttatcc atcgcgctgc gcatatcttc
     7621 tgacagatcg cacacttcgg cagagagttt tactgtcagg caaccactga tggttccatg
     7681 ttggcaaaac tggttcagtg tttgctggta ataagccagt atgcggtcgc ggtagttacc
     7741 ttcgccggat tgcagcaact cagtcagtcg ctggtgatat gcggtgtaat gacgctcaag
     7801 catggcaacg ccaaacgctt ctttagagcg aaagtagtga tagaaggacc ctttcggcac
     7861 ttcagcggtt tttagtaatt cgcttagccc catcccggtg aatccacgtt gcaggcaaag
     7921 ttgctcgccc gtcgccagga gatgttcgcg agtatcatgt tcggtgtgtt tgttcatgcg
     7981 ttggagtgta gtagaccagt cggtctagtg caagcaaagt tgctactttg gacattaaca
     8041 gcttcaataa tggtaataat cttatctgag gagggcgaag tggcggagca attagagttc
     8101 tttcccgtcc agagcccgtg ccggggaatt tgccagtctg acgaacgcgg gttttgtcgc
     8161 ggctgttttc gtagtcggga tgagcgtttt aactggaata aaatgagcga tggcgaaaaa
     8221 caagaggtgc tgcgcctttg tcggcagcga ttaatgcgca aattacgcgc aaataagcca
     8281 gcgtcatcag acgaaccgga gcaaccatca ctcttttgaa cctaatcttg cgtatactcc
     8341 tctcatatct gataagagga agcgattatg gttcagcgta ttactattgc gccgcaaggc
     8401 ccggagtttt cccgttttgt gatgggctac tggcgattga tggactggaa tatgtccgcc
     8461 cgccagctgg tcagttttat tgaagagcat ctggatctcg gcgtgaccac cgtggaccat
     8521 gctgatattt atggtggcta tcagtgcgaa gcggcgtttg gcgaggcact gaaactggca
     8581 cctcacctgc gtgaacggat ggaaatcgtc agtaaatgcg gtatcgcgac gaccgcgcgt
     8641 gaagaaaacg tcattggtca ttacatcact gaccgcgatc acatcattaa gagcgccgaa
     8701 cagtcgctaa ttaatctcgc gaccgatcat ctggatctgc tgttaatcca ccgaccagac
     8761 ccgttaatgg atgccgatga agtggcggac gcgttcaaac atctgcatca gagcggcaaa
     8821 gtgcgtcatt ttggcgtatc gaactttacg cctgcgcaat ttgccctgtt gcaatcacgt
     8881 ctgccgttta cccttgccac taatcaggtg gaaatatccc cggtgcatca gccgttactg
     8941 ctggatggca cgctcgacca actacaacaa ctgcgtgttc gtccgatggc gtggtcctgc
     9001 cttggtggtg gtcgtctgtt taatgatgat tatttccagc cgctgcgtga tgaactggct
     9061 gtggtggcag aggagttaaa cgcgggctcg attgaacagg tggtttacgc ctgggtatta
     9121 cgtttaccat cgcagccgct gccaattatc ggttcaggta aaattgagcg cgtacgggca
     9181 gctgtcgaag cagaaacact gaaaatgacc cgtcaacaat ggtttcgtat tcgtaaagcg
     9241 gcactggggt acgacgtacc gtaagcactt ttaggaatag ccgccgttca aaaatgtgtc
     9301 aatggtttac acttattcag gaatgcacaa tgaacggagg tcctatgaaa cgttttagtc
     9361 tggctattct ggcgctggtt gttgcaaccg gcgcacaagc tgccagtgaa aaagtcgaga
     9421 tgaacctcgt cacgtcgcaa ggggtagggc agtcaattgg tagcgtcacc attactgaaa
     9481 ccgataaagg tctggagttt tcgcccgatc tgaaagcatt accccccggt gaacatggct
     9541 tccatattca tgccaaagga agctgccagc cagccaccaa agatggcaaa gccagcgccg
     9601 cggaatccgc aggcgggcat cttgatccac aaaataccgg taaacatgaa gggccagaag
     9661 gtgccgggca tttaggcgat ctgcctgcac tggtcgtcaa taatgacggc aaagctaccg
     9721 atgccgtcat cacgcctcgt ctgaaatcac tggatgaaat caaagacaaa gcgctgatgg
     9781 tccacgttgg cggcgataat atgtccgatc aacctaaacc gctgggcggt ggcggtgaac
     9841 gctatgcctg tggtgtaatt aagtaattaa gaggcctgcg taccttgcgg tggtgcttgc
     9901 tcaagttgcg aaagcgagca gtacagtcgc cagacaattg ccgccagctc acgggcggca
     9961 ggttgatgat gacgggcaag gctgtcgcaa atccgctgta attcttcaag tgtggccgcc
    10021 agtgattttt gctgaacgcc acgctcactc atcactcccc gcaacagtga aatacagtta
    10081 tcccgtactc gcgataacgg atcggaacgc gattcccagt cgcgcaattg ccagacaaca
    10141 tgagaacagt tcagcagcac tacaccccag cgtaataacc aacggcgagc cagcgcatcc
    10201 tggctgttac tcaactgact gacgtgatga taagtgagcg attcaaattc gctttcactc
    10261 agtgttggat ggcggcttag ctgatcgaca aaatcccggc gcagcgcgcg aatatggcgg
    10321 cggcttttac gagcatccga tcctggacgc agaatggcga acgctagcca agccagcgca
    10381 acgccaacga tttttgccag attatcgtta agaaagtcag caaaatcata caccggggga
    10441 ttagtgacag cgataaacga acccataaaa acaatcagtt gcccccacag tgcggcaaat
    10501 ttgggcatct gcaatttaag aagctgcatt gtcgccagca gtggaaagag aaacagtaaa
    10561 aattgccaca gatcgctaat ctggaccatc aggccaaatt tgaccacaaa gctgaatagc
    10621 gaaagtaaca ccagcgtgcg catcagcagt gacaacgact taaacggtgc tgcgacggcg
    10681 gagtagagta cgcagctaat tgctgccagc gttaatgcat tggcaccggc atcctattgc
    10741 gatgcaatac tccatgcgcc aatcatcatc aacgtacaaa atgtacgcag cccgctccac
    10801 atagcttcgg cgttgtcggt atgacgagcc agagcggatg tccgtgcgag tctggcatga
    10861 tcatctacac cgctttgcag acgatgtaat tcctgactac tttgcagata aaggcggcaa
    10921 aaataacgta gtcgctgcca gaaggcgacg tgccggtagt cggcgacgtt ggtcgggcgt
    10981 agcggggcga taatacgtgc gacggtgtaa gcatctgttt gcgaactggc gagcgccgtc
    11041 agcaattgtt cgagaatttc tcgcgtggca cctggcggtg agggccagtt gagcaacata
    11101 cgtcgcaggc tggagatgac actggtcata cgtaattgct ggtggagtag cgcattaagg
    11161 cgcgcgtttt gctggcgaaa acgatagtgg ctccagaaag cctggatacg cagcaaattc
    11221 atggtcagta tctgcccaat ccccccctca tgtgctgcac gaatggcatc gtttgtttca
    11281 ggctgccaga gtaaactggc atgttccagt aatcgggcgt gcatgttttt caatgcggtt
    11341 aaaagggctg tagcatcgga actgctaggc aggatcatca tcatcatgcc gccgcacaaa
    11401 ataccgacta tcacctcgca aacgcgcgcc tgagcgatat cctacagctg gctggcctca
    11461 gtaatattaa ccatcggaaa ggcgatgatg gcagccgtgt agccgccagt tgaaatgcat
    11521 acgcgacgtt attcgtgaag tgcgcacagg cccaggtaca aaagccaagc cacgccgaca
    11581 tgctcaatag aaaaaaccac ggctcattga gcgtatgccc ggcaagaagc agtgccgcaa
    11641 tggctcccag taaactgcca gcgatgcgtc cgaggctttt gctgatgaca ccgccaacgg
    11701 tgggaaagct aaccactgca gccgaggtca tcgcccaata gggttcatcc agattcaaat
    11761 aataggcaac cgtcagcgcc agacacatgg caatggtatt gcgtaacgca taacgccatt
    11821 gcgccagcgt ggccttgaac cagggcaaat tgcgcaagga ccatgacgat gcgttcatta
    11881 ttgacctacg gcaatgctac aggtggtgcc cgacaccagc gtgacatcgc ctggaacttt
    11941 atccagcgca aagcggacgg gaacgcgttg ggcgagacga acccagggga cgttaggttt
    12001 cacatccgga ataaggcttg agtcactttc aacgctttga tcataaatcg cccgaccgat
    12061 actggaaacg tgaccccgta acgttttgtt atcactatag agggtaattt gtgctggtgc
    12121 accttcgcgg atatggcgca acttggtttc ttcaaaataa ccaatgacgt aaaacgagtg
    12181 gctgtcgaca agggcaaaca gcggtttccc ggtgtcagcg taatcgccga tgcgggtagt
    12241 gaggttagtc acccaaccac tcaccggggc gcgaatttcc gtttgcgcca gttgccattg
    12301 tgtctgtttc agcgtggcct gtgcggcatt aacactggcc tgcatcgctt taacattgag
    12361 gttagcggta tcgagttctt cggcagaaat aaaattttgt gagagatgac gacgacgatt
    12421 cgcttcgtta ttggcttttg cgaggtcaga ttgcgctttc gccagctgag cctgtgcgtt
    12481 cagctcggcg atctgaaagg gcgttttatc gatcgtgagc agaagatccc ccgcgttaac
    12541 cagttggttg tcttttatat tcagctcaac aatacgtccc gacacctgtg gggtgataga
    12601 aaccttttct gcgcgtattt tcccgtcgcg tgtccacgga gattgcatgt aataattcca
    12661 cagccaccat ccggcaagaa ccgcaactat cgctacaatg attattgaga aatacttaat
    12721 tgttttaatt gacatagtta ccacgcaatc agtattgcca gagcaaggca aacgcaaatc
    12781 gcaaacagcg ataaatccat ttacaaggga tgccagatgt caccggcgta gatccagcca
    12841 cgaagcaggc ggtgtacgac aagccagatg acgaatccaa acgcgaaggc tttgaaaaac
    12901 ggaggaaaat agacggacgc accgaacacc agatcttgta agggcaatcc tgttgcattg
    12961 agcataaact tcacaaagta gattccttta cgaccgaata tattgcgtta gattaataaa
    13021 tattctttaa gtgcgaaaaa tttacgcgca atttctgaaa aatatgtctg acggtaacca
    13081 aatgcagcaa tacatttgtt ttagcaataa aattgctgca cactattcta aaagccgcat
    13141 aatatcttag caagctaatt ataaggagat gaaattggaa tcgccactag gttctgatct
    13201 ggcacggttg gtgcgcatat ggcgtgctct gatagaccat cgcctgaaac cgctggagtt
    13261 aacacaaacc cattgggtta cgttacacaa tatccatcag ttacctccag accagtcgca
    13321 aattcaactg gcaaaagcga ttggcatcga gcagccatca ctggtccgta ctctggacca
    13381 actggaagaa aaagggttaa tttcgcgtca aacttgtgcc agcgatcgtc gggctaaacg
    13441 tattaaactg acggaaaagg cagagccact gatcagcgaa atggaagctg ttattaacaa
    13501 aacccgcgcg gaaatattac atggcatctc cgcagaggaa ctggagcaac tgattacgct
    13561 catcgcaaaa cttgagcata atatcattga gttacaggcc aaagggtgaa atgaaggggg
    13621 cgtgtggtca gtaacctgac cacacgcaaa cttatttagc gcggagaaac ggtcacctga
    13681 ctgccattgc tggccagtac gacacgttgg cccggagaga aacgagtgtt gccttgtttc
    13741 tgtaccacca tgatggtatt accatcgtct ttacgaattt ccagctcgac accctgcgtt
    13801 ttgttcattg cactctgtac gccctgacca gctacgccac ctgcaacagc gcctgctgca
    13861 gtagccagag aacgcccggt tccgccacca acagtattcc ccaggaaacc accaagaaca
    13921 gcaccgccaa ttgcaccgat aacgttggaa tcatcaccgc cctgaatctg taccggacgt
    13981 acgttaacga tggtgccata gctgacattc tgtacttgtt tcgcttcaga agcggtataa
    14041 acatcccctg acagggtgtc gttattaaca caaccgacaa gagacagacc taccattgaa
    14101 acaaccaata cgcgtttaat cattgaaaaa tctcctgttc accatgaaac gccacgcaag
    14161 catccctcat ggtcaaagta tatggcatat gtgaatccat ggttacatgt tctaccaaat
    14221 atgagcaaat cataatgaaa gtaggatcaa ccaattataa acaaaacatt catgatgatt
    14281 attgatttga agataatgtt ttactaccaa cggtaaaaat cggtcattcc gcatggtatt
    14341 cacgaaaagt ttatgtttga gtggtgcgca aacgtcagat tgaaaaagga tgaactatga
    14401 aatcgggccg ctttattggc gttatgtcag gcaccagcct tgatggtgtt gatgttgtgt
    14461 tggcgacaat agatgaacac cgggtcgcac agctggcaag cttgagctgg ccgatcccgg
    14521 tgtctctgaa acaggctgta ctggatattt gccagggcca gcagcttaca ctttcgcagt
    14581 ttggacagct tgatactcaa ctcgggcgac tttttgctga tgcggtcaat gccttgctta
    14641 aggaacaaaa cctgcaggcg agagatatag ttgcgatcgg ctgtcacggt caaaccgtct
    14701 ggcatgaacc gacgggcgtg gcaccacaca ctttacagat tggcgataac aatcaaattg
    14761 tggcacgcac cggaattacg gttgtcggtg attttcgccg tcgcgatatt gccttgggag
    14821 gacaaggcgc accgctggta cctgcgttcc atcatgcctt gctggctcac ccaaccgagc
    14881 gacgaatggt gctcaatatt ggcggcatcg ccaatctgtc actgctcatt cctgggcagc
    14941 cggttggcgg ctacgatacc ggtcctggta acatgctgat ggatgcctgg atctggcgtc
    15001 aggccggtaa accttacgat aaagatgccg agtgggcacg ggcgggtaaa gttattcgcc
    15061 cactgctgca aaatatgctc agcgacccat atttctcgca acctgcaccg aaaagcaccg
    15121 gacgcgaata ctttaactac ggctggctgg agcgccattt acgccatttt ccgggtgttg
    15181 atccccgtga tgttcaggcc acactggcag aactcaccgc cgtgaccatt tctgaacaag
    15241 ttttgttgag cggtggctgc gaacgattga tggtatgtgg tggaggtagt cgtaatccgc
    15301 tactcatggc gcgtctggcg gcattactgc caggcacaga agtcaccacc accgatgccg
    15361 ttggcattag tggcgatgac atggaagcat tggctttcgc ctggcttgcc tggcggacgc
    15421 tggcgggatt accaggaaat ctgccttccg tcactggcgc aagccaggag acggtactgg
    15481 gggctatttt ccctgctaac ccgtgatatc agagttaact gaatttttct taccgcgtct
    15541 gccgttacac ttggaacgtt agggagggcg tattgccctc cagaccagga aagtcttcgg
    15601 gaaatgtcta tgaaaaaact gttactgatc tgtttgccgg tgcttctcac cggctgtagc
    15661 gcgttcaatc aactggttga gcacatgcaa accgctacgc tggaatacca gtgtgatgaa
    15721 aaaccgttga cggtcaaact gaataatccg cgccaggaag tcagttttgt ttacgataat
    15781 caactactgc atctcaaaca gggcatttca gcgtctggtg cacgttacac tgacggaatc
    15841 tatgttttct ggtcgaaagg cgatgaagcg actgtctata aacgcgaccg catcgtattg
    15901 aataactgtc agttacaaaa tccacagcgt tgagattttt ccaggggcgg cgcacaatag
    15961 cgtcacccac tgacaatccg taaagaaaac catgtctgat aacgacgaat tgcagcaaat
    16021 cgcgcatctg cgccgtgaat acaccaaagg cgggttacgc cgtcgcgatc ttcccgccga
    16081 tccattaacc ctttttgaac gttggctctc tcaggcgtgt gaagccaaac tggcagaccc
    16141 taccgcgatg gtggtcgcta ccgtggatga acatgctcag ccttatcaac gcatcgtttt
    16201 actcaaacat tacgacgaaa aaggcatggt gttttacacc aacctcggta gccgtaaagc
    16261 acatcaaatt gaaaataatc cgcgcgttag cctgctgttc ccgtggcata cccttgaacg
    16321 ccaggtgatg gtgatcggta aagcagaacg actttcgact ctcgaagtga tgaaatattt
    16381 tcatagccgc ccgcgtgata gccagattgg tgcatgggtt tcgaagcagt ccagtcgcat
    16441 ttctgcccgc ggtatccttg aaagtaaatt cctggagctg aagcagaagt ttcaacaggg
    16501 cgaagtgcca ttgccgagct tttggggcgg ttttcgcgtc agccttgaac agattgagtt
    16561 ctggcagggc ggtgagcatc gcctgcatga ccgctttttg taccagcgag aaaatgatgc
    16621 gtggaagatt gatcgtcttg caccctgaaa agatgcaaaa atcttgcttt aatcgctggt
    16681 actcctgatt ctggcacttt attctatgtc tctttcgcat ctggcgaaaa gtcgtgtacc
    16741 ggcaaaggtg cagtcgttat atacatggag attttgatgg caagcagtaa cttgattaaa
    16801 caattgcaag agcgggggct ggtagcccag gtgacggacg aggaagcgtt agcagagcga
    16861 ctggcgcaag gcccgatcgc gctctattgc ggcttcgatc ctaccgctga cagcttgcat
    16921 ttggggcatc ttgttccatt gttatgcctg aaacgcttcc aacaggcggg ccacaagccg
    16981 gttgcgctgg taggcggcgc gacgggtctg attggcgacc cgagcttcaa agctgccgag
    17041 cgtaagctga acaccgaaga aactgttcag gagtgggtgg acaaaatccg taagcaggtt
    17101 gccccgttcc tcgatttcga ctgtggagaa aactctgcta tcgcggcgaa caactatgac
    17161 tggttcggca atatgaatgt gctgaccttc ctgcgcgata ttggcaaaca cttctccgtt
    17221 aaccagatga tcaacaaaga agcggttaag cagcgtctca accgtgaaga tcaggggatt
    17281 tcgttcactg agttttccta caacctgttg cagggttatg acttcgcctg tctgaacaaa
    17341 cagtacggtg tggtgctgca aattggtggt tctgaccagt ggggtaacat cacttctggt
    17401 atcgacctga cccgtcgtct gcatcagaat caggtgtttg gcctgaccgt tccgctgatc
    17461 actaaagcag atggcaccaa atttggtaaa actgaaggcg gcgcagtctg gttggatccg
    17521 aagaaaacca gcccgtacaa attctaccag ttctggatca acactgcgga tgccgacgtt
    17581 taccgcttcc tgaagttctt cacctttatg agcattgaag agatcaacgc cctggaagaa
    17641 gaagataaaa acagcggtaa agcaccgcgc gcccagtatg tactggcgga gcaggtgact
    17701 cgtctggttc acggtgaaga aggtttacag gcggcaaaac gtattaccga atgcctgttc
    17761 agcggttctt tgagtgcgct gagtgaagcg gacttcgaac agctggcgca ggacggcgta
    17821 ccgatggttg agatggaaaa gggcgcagac ctgatgcagg cgctggtcga ttctgaactg
    17881 caaccttccc gtggtcaggc gcgtaaaact atcgcctcca atgccatcac cattaacggt
    17941 gaaaaacagt ccgatcctga atacttcttt aaagaagaag atcgtctgtt tggtcgtttt
    18001 accttactgc gtcgcggcaa aaagaattac tgtctgattt gctggaaata atgcattaag
    18061 tggaaagggg gagtgagaaa tcactccccc tggtttttat acagggaaca tgatgaaaaa
    18121 tattctcgct atccagtctc acgttgttta tggtcatgcg ggtaacagtg cggcagagtt
    18181 tcctatgcgc cgcctgggcg cgaacgtctg gccgctgaac accgttcaat tttctaatca
    18241 cacccagtac ggcaaatgga ctggctgcgt gatgccgccc agccatttaa ccgaaattgt
    18301 gcaaggcatt gccgccattg ataaattaca cacctgtgat gccgtgttaa gtggctatct
    18361 gggatcggcg gagcagggtg aacatatcct cggtatcgtc cgtcaggtga aagccgcgaa
    18421 tccgcaggcg aaatattttt gcgatccggt aatgggtcat ccggaaaaag gctgtatcgt
    18481 tgcaccgggt gtcgcagagt ttcatgtgcg gcacggtttg cctgccagcg atatcattgc
    18541 gccgaatctg gttgagctgg aaatactctg tgagcatgcg gtaaataacg tcgaagaagc
    18601 ggttctggca gcgcgcgaac tcattgcgca agggccacaa attgtgttgg ttaaacacct
    18661 ggcgcgagct ggctacagcc gtgaccgttt tgaaatgctg ctggtcaccg ccgatgaagc
    18721 ctggcatatc agccgtccgc tggtggattt tggtatgcgc cagccggtag gtgttggtga
    18781 tgtgacgagc ggtttactgc tggtgaaact gcttcagggg gcaacgctgc aggaggcgct
    18841 ggaacatgtg accgctgcag tctacgaaat catggtgacc accaaagcaa tgcaggaata
    18901 tgagctgcaa gtggtggctg ctcaggatcg tattgccaaa ccagaacatt acttcagcgc
    18961 aacaaagctc tgaaatatct catttcggcc cacaacgacc tgtgggccga tggctattac
    19021 tttaagcctt ccgctgacag tgcgtcttgt acttccggac gttcagccat acgttgcata
    19081 aatgctgcaa tgtgctctaa cccttccaga ttcagtttca ccgcgtatgc ccagcgcaga
    19141 accgtaaaca gataggcatc agcaattgta aatctttgcc cgcagatcca gtgctcatcc
    19201 ttcagtgtct cgttcacata ttgcagcttc ttctccagct gcgcgcgaac tgtcggtttg
    19261 tactcttccg gtgtatcagg gcgaaacaga ggtgtgaaac ctttatgcag ctcggtggcg
    19321 atgtaattca gccattcgat ggttttatag cgggaaatac tgtttaccgg tgccagcaac
    19381 tggcggtcgg ggacgctgtc ggcaagatac tgcataatcg ctacgccttc cgtcagcaaa
    19441 gtaccgtcat ccagcagcaa tgcaggcacc tgccccttag ggttaacggc aaagtaatcg
    19501 tcaccgtttt cgagacgttt tttcattaaa tccacactga cgagggtaaa atcctttccg
    19561 ctctcacgca gggtgatatg ggaagcgaga gagcaggcac ccggtttgta gaacaatttc
    19621 atcggtaact ccttttgtct gtggtttaaa gtatggtagt gcgttgctga acaaaaaaaa
    19681 agccgctaac gaaaagttag cggcttgtaa aagagtttcc ctaaatttta cgctacagca
    19741 gctttcgccg ctttgtctgc agcgtcatcc tgcgtcatac ggtgcagttt aggcgcggtc
    19801 agcagcatca gtactgcaat aatggcagta gcgacaccaa tctgcaagaa tacgcgacca
    19861 taaacttcca gtgacatcag cgggtcggta acgttatccg gcacagccat catacccgca
    19921 acataaccac caatcaggtt tgcaccggca gtggtcagga accagctacc cataatgaag
    19981 cccatcagac gctgcggaac gagttgtgca accattgcca gacccagacc agagatcatc
    20041 agttccccga tgctctgcag gccatagctt gcgaccagcc agcttacaga cacgatacca
    20101 gcgtcagacg cgaatttcgc acccagcggc agaatcagga acgcaccaga acacatcacc
    20161 atgccgattg caaacttggt tggcatcggc agggtatcgc ccatcttgtt atagatagcg
    20221 gccagaatcg gactaccgat gatgatccag aacgggttca gtgcctgata ctgctcaggt
    20281 tctacggcca gacccagaat ggagtgctca acgttacgaa tcgcaaagaa gttcagtgac
    20341 gttggcatct ggctgtacag cacgaagaag ataatggctt cgagcatcag gatgaaggca
    20401 acgatcattt tacgacgcgc agcacctttc atcgcgaagg cttctttacc gaagataacc
    20461 acgataccga aggcaacaac gcccagcgcc atacgcgcaa cttcctgatt gtgcagcagc
    20521 caggtggcga tagcgatcag tgccacaaca ccaataatgg tcagtagcag gttacggtag
    20581 ttgataggct cgaagtctgg ttttgaaccg tactgtttaa cccagcgttg gcagaaggcg
    20641 aagttaacga tagtgatcag caggcctaca acgctcaacg caaacgcaac actccagccg
    20701 tatttcgcgg ccagccacgg cgtagcaatc atagagaaga aagagccgat gttgacggac
    20761 atgtagtaca tggtgaatgc accgtccaga cgcgggtcgt ttttctcata gcatgtagaa
    20821 agcagagaag acgggttagc tttaaacagg ccgttaccga ccgcaatagc cgccataccc
    20881 atataaacga taccggcgtc gtgaccagac caggcaacca gagcataacc aatcgccagc
    20941 acaatagcgc cgagcataat tacgcgttta gtacccagta ccttgtcacc taaccagccg
    21001 ccgatagcga ccagaccata aaccagggca ctaaaggaag agaaaagggt gattgaatcc
    21061 gcttcagaca tacccagttg tttaaccagg taaacagcca taattccttg taggccgtaa
    21121 taaccaaaac gttcccataa ctcaatcgag aagatgagat agaacgcctt cggttgtttg
    21181 aaagcgttca aactgacgct ttcagttggt ttttggtttg cagtggacac ttttacctct
    21241 ttttttacat cccatattaa cgggggtgct ttctcgcgtt atgtctaaaa aacatacgcg
    21301 caattgttat agtgggaggg gaaacggcag gtaatgttca ctatcttgca ctttcagaca
    21361 agtcctttgt aataatttgt tacatataac tgaggcgggg aattcaacca ttccgggaaa
    21421 tgttatccag cgttaaattt ttcaaaaaac gtaacggcag attttttcac tgcactgaga
    21481 ggggggtgat ggcttaacgg cgatatgttc tgctatttag cgtttttact agtgagatag
    21541 tccagtttct gaaaaatagc cagtgtaatg ttttgtaggt caatatttgt tgcgtgtgta
    21601 aatttaaatg attttaacct gattcttgca atgtttttac attgcgacag catcgtgatc
    21661 ttgatcacga atgaatagaa aatttcgcta ttaaaaaaac aattaacctg catttttggt
    21721 tatccgcaaa cggattacct gatgataacg ctaagcaatg gcatcattca cgttaaaaag
    21781 atgttttaaa agaggataaa gaaaggttat caatggggta atcggtgtta ccccttttct
    21841 tcagatgtca actttctctt tgtattcaca aagatcttca ataatacaag agccacagcg
    21901 gggcttgcgg gcaatgcagg tataacgccc gtgcaggatc aaccaatggt ggcagtcgac
    21961 tttaaactct gccggaacca ctttcagtag cttttcttct acctgttcaa cgtttttccc
    22021 cggcgcaaat tgagtacgat tacaaacgcg gaaaatgtgc gtgtcgacag caatagtcgg
    22081 ccagccgaat gcagtgttta atacgacgtt ggctgtttta cgacctacgc cgggcagggc
    22141 ttcaagcgca gcacgatctt ccggaacctc gccattatgc tgctccagta agatacggca
    22201 ggttttgatg atattttctg ctttgctgtt ataaagccca atcgttttga tataggtttt
    22261 aaccccttca acgcccagtt caagcatcgc tgcaggcgta ttcgccaccg ggtagagttt
    22321 cgccgtcgcc ttattaacac tgacatcggt cgcctgagcg gaaagcagta cggcaatcag
    22381 caattcaaaa ggcgaactga aattaagctc ggtggtggga tgaggattgt tctcacgcag
    22441 gcgagtgagg atctccaggc gttttgcttt gttcatcaga cattccctgt ttcaccgttt
    22501 ggcaatgcac gttcggcagc tgcttcagta cggcgctttt tcattctttc atcaatcagg
    22561 tattttcctg ccagcatcag tcccaggcca ataaatgcac ctggtggcag catcgccagc
    22621 aggaaagggg agtcggtgtg gaaaatctcc acgcgtaata cttttgccca gctacctaac
    22681 agcgcatctg caccgtcaaa caatgtgcca ttgccgataa tttcgcgtag tgaacccagc
    22741 acgaacatgg cgcaggttgc gcccatacca attgaaaagc cgtccagtgc cgaaagcgcc
    22801 ggaccttttt tggcggcgaa ggcttcagcg cggcccacaa cgatacagtt agtgacaatc
    22861 agcggaataa aaatccctaa tgattgatac aggccaaagg cgtaggcgtt gatcagcatc
    22921 tgtacagcgc tgaccaccga ggcgatgatc atcacgtaaa tgggaatgcg gatctcggct
    22981 ggcgtccagt gacgcagcgt cgaaatggtc aggttggtca gcgtcagtac cagcgtagtc
    23041 gcaagtccta aacccagagc attagtggca gtggacgtga ccgccaacag aggacaaagg
    23101 ccgagcaact ggaccagcgc agagttgttt ttccacaacc cctgaacaat aacgtcttta
    23161 atttcgctca cgctttattc tccacaggca ggaagttgag aaagttgtgc cggtaacgtc
    23221 tgagcgtaca atccggcgcg ttttaccgca ttaaccaccg cgcggggagt aatcgtcgcg
    23281 ccggtgaact ggtcgaaatc accaccatct ttcttcaccg cccagtgcgc atcatccgca
    23341 ccactgattt ttttacccgc aaaatgggtg atccagtcag aaaggcgcag ttcgatttta
    23401 tcgccaagcc ctggcgtttc gtggtgctct gtcacgcgcg tgccaagtac cgtgccgtta
    23461 aaatcggctc ccaccagcag ctgaatcgca ccggaatagc catctggcgc ggttgcttcc
    23521 agaacggcgg ctaccggttt gtcatcctgt ttggcgatgt aaacccgatg ctcaccttta
    23581 cctaactctg gcgcagttac cagatagcaa ctctgtgcca gcgcattgtt atagcgttcg
    23641 gctggcagca cctgatcaaa taatgccttt tgttgcagac ttgcctgttc agcaatcgtc
    23701 gttttggtca tctggttgat ggccgcagtt aaccctgttg aacccgctgc aaatagcgct
    23761 aacgtaatgc cgtgttttcg gatagttttc agcatggttt accctttgcg atggccgtag
    23821 acgcgcggac gcgtgtagta atcgatcaga ggaaccgtga tgttcgccag caggacggca
    23881 aaagccacgc cgtcaggata gccgccgaaa ctgcggatca accagactaa taagcccgca
    23941 agcgcgccga aaataagacg accacgattg gtcgtagaag cggtaaccgg gtcagtcaaa
    24001 ataaagaatg cgccgagcat ggtcgcacca gacagcagat gaatttgcgg tgctgccagt
    24061 gtttctggtg agaacaacca gcccaacgtt gcgcataacg ccagcgttac taagaagctg
    24121 aggggaatat gccagcgaat cgctttctgc catagcaacc acaggccgcc agccagccag
    24181 gcgagattta cccattgcca accagcgccc gccagaatac cgctgtagat cggatattgc
    24241 ataatctgtt caaccgaatg accggcacgg acagaggttt taaatgtatc cagcggtgtc
    24301 gcctgactaa tgccatcaat acctaagtgt agtgtgttca tatcagcacc actggcggta
    24361 tgcccgctga aaataacctg tatggcgtcg ataaaaccag ggatgttgac cgcaatttca
    24421 tgtggcggta accagctggt catctgcacc gggaaggaga tcagtaagac cacataacca
    24481 atcattgccg gattaaacgg gttttgcccc agaccgccat acaactgttt agcgatgatc
    24541 accgcaaaca ccgtacccag cacgaccatc caccatggcg cgaggggggg aatacttacc
    24601 gccagtaata agcctgtcag caatgctgag ttatctttca acgttgcggc taccgactgc
    24661 ttgcgtagtt tgagtacgag agcttcggct aacagagtac taaccgatgc caacaggatc
    24721 tgaacgagag taccccaacc aaaaaaccac agttgcgctg cgattcctgg cacggctgcg
    24781 agcaacacca acagcataat gcgcgatgtc tggcgctggt tatgggtata aggggagcta
    24841 gctattctga ataccattta gtcctcgttt acaacctttt gctgggcggc ttttttggcc
    24901 tgagcgcggg caatagccgc ggcaactgcc gctttgcgcg gatcaacctg ttcttctggt
    24961 tctgcgttag tctgttgctg ttccagcttg cgcgctttgg cacgggcaat agcggcttcg
    25021 acggcggctt tgcgcggatc aacctgttct tcaggtaccg cattagcctg ttgctgttcc
    25081 agcttgcgtg ctttggcgcg tgcaatagcc gcttcgacgg cagctttgcg cggatcaacc
    25141 tgttcttctg gctccgcatt agcctgttgc tgttccagtt tgcgcgcttt ggctcgggca
    25201 atagcggctt cgatggcggc tttgcgcgga tcaacctgtt cttctggttc cgcattag
//
LOCUS       DADKRT010000043        25129 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.043, whole genome shotgun sequence.
ACCESSION   DADKRT010000043 DADKRT010000000
VERSION     DADKRT010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25129
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.043"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..403)
                     /locus_tag="JQ356_001490"
     CDS             complement(<1..403)
                     /locus_tag="JQ356_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY4621630.1"
                     /translation="MDTTLPFLILYACLSALLFFWDAKHGLLPDRFTCPLLWSGLLFY
                     QVCHPDGLADALWGTIVGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHSWAFL
                     PRLVFLAASFACGAVVIGLLMRGKESLKNPLP"
     gene            782..1093
                     /gene="rpsJ"
                     /locus_tag="JQ356_001491"
     CDS             782..1093
                     /gene="rpsJ"
                     /locus_tag="JQ356_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HAY4621631.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            1126..1755
                     /gene="rplC"
                     /locus_tag="JQ356_001492"
     CDS             1126..1755
                     /gene="rplC"
                     /locus_tag="JQ356_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HAY4621632.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
     gene            1766..2371
                     /gene="rplD"
                     /locus_tag="JQ356_001493"
     CDS             1766..2371
                     /gene="rplD"
                     /locus_tag="JQ356_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HAY4621633.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            2368..2670
                     /gene="rplW"
                     /locus_tag="JQ356_001494"
     CDS             2368..2670
                     /gene="rplW"
                     /locus_tag="JQ356_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HAY4621634.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            2688..3509
                     /gene="rplB"
                     /locus_tag="JQ356_001495"
     CDS             2688..3509
                     /gene="rplB"
                     /locus_tag="JQ356_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HAY4621635.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            3526..3804
                     /gene="rpsS"
                     /locus_tag="JQ356_001496"
     CDS             3526..3804
                     /gene="rpsS"
                     /locus_tag="JQ356_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HAY4621636.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            3819..4151
                     /gene="rplV"
                     /locus_tag="JQ356_001497"
     CDS             3819..4151
                     /gene="rplV"
                     /locus_tag="JQ356_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HAY4621637.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            4169..4870
                     /gene="rpsC"
                     /locus_tag="JQ356_001498"
     CDS             4169..4870
                     /gene="rpsC"
                     /locus_tag="JQ356_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HAY4621638.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            4883..5293
                     /gene="rplP"
                     /locus_tag="JQ356_001499"
     CDS             4883..5293
                     /gene="rplP"
                     /locus_tag="JQ356_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HAY4621639.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            5293..5484
                     /gene="rpmC"
                     /locus_tag="JQ356_001500"
     CDS             5293..5484
                     /gene="rpmC"
                     /locus_tag="JQ356_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HAY4621640.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLNEKAGA"
     gene            5484..5738
                     /gene="rpsQ"
                     /locus_tag="JQ356_001501"
     CDS             5484..5738
                     /gene="rpsQ"
                     /locus_tag="JQ356_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HAY4621641.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
     gene            5903..6274
                     /gene="rplN"
                     /locus_tag="JQ356_001502"
     CDS             5903..6274
                     /gene="rplN"
                     /locus_tag="JQ356_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013975775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HAY4621642.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            6285..6599
                     /gene="rplX"
                     /locus_tag="JQ356_001503"
     CDS             6285..6599
                     /gene="rplX"
                     /locus_tag="JQ356_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HAY4621643.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            6614..7153
                     /gene="rplE"
                     /locus_tag="JQ356_001504"
     CDS             6614..7153
                     /gene="rplE"
                     /locus_tag="JQ356_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HAY4621644.1"
                     /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            7168..7473
                     /gene="rpsN"
                     /locus_tag="JQ356_001505"
     CDS             7168..7473
                     /gene="rpsN"
                     /locus_tag="JQ356_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HAY4621645.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            7507..7899
                     /gene="rpsH"
                     /locus_tag="JQ356_001506"
     CDS             7507..7899
                     /gene="rpsH"
                     /locus_tag="JQ356_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HAY4621646.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            7912..8445
                     /gene="rplF"
                     /locus_tag="JQ356_001507"
     CDS             7912..8445
                     /gene="rplF"
                     /locus_tag="JQ356_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HAY4621647.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRIKEAKKK"
     gene            8455..8808
                     /gene="rplR"
                     /locus_tag="JQ356_001508"
     CDS             8455..8808
                     /gene="rplR"
                     /locus_tag="JQ356_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HAY4621648.1"
                     /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            8823..9326
                     /gene="rpsE"
                     /locus_tag="JQ356_001509"
     CDS             8823..9326
                     /gene="rpsE"
                     /locus_tag="JQ356_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HAY4621649.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            9330..9509
                     /gene="rpmD"
                     /locus_tag="JQ356_001510"
     CDS             9330..9509
                     /gene="rpmD"
                     /locus_tag="JQ356_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HAY4621650.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
                     RGMINAVSFMVKVEE"
     gene            9513..9947
                     /gene="rplO"
                     /locus_tag="JQ356_001511"
     CDS             9513..9947
                     /gene="rplO"
                     /locus_tag="JQ356_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HAY4621651.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIVG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            9955..11286
                     /gene="secY"
                     /locus_tag="JQ356_001512"
     CDS             9955..11286
                     /gene="secY"
                     /locus_tag="JQ356_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HAY4621652.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            11318..11434
                     /gene="rpmJ"
                     /locus_tag="JQ356_001513"
     CDS             11318..11434
                     /gene="rpmJ"
                     /locus_tag="JQ356_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HAY4621653.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            11581..11937
                     /gene="rpsM"
                     /locus_tag="JQ356_001514"
     CDS             11581..11937
                     /gene="rpsM"
                     /locus_tag="JQ356_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HAY4621654.1"
                     /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
                     ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            11954..12343
                     /gene="rpsK"
                     /locus_tag="JQ356_001515"
     CDS             11954..12343
                     /gene="rpsK"
                     /locus_tag="JQ356_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HAY4621655.1"
                     /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            12377..12997
                     /gene="rpsD"
                     /locus_tag="JQ356_001516"
     CDS             12377..12997
                     /gene="rpsD"
                     /locus_tag="JQ356_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HAY4621656.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
     gene            13023..14012
                     /gene="rpoA"
                     /locus_tag="JQ356_001517"
     CDS             13023..14012
                     /gene="rpoA"
                     /locus_tag="JQ356_001517"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HAY4621657.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            14053..14436
                     /gene="rplQ"
                     /locus_tag="JQ356_001518"
     CDS             14053..14436
                     /gene="rplQ"
                     /locus_tag="JQ356_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HAY4621658.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKAEAAAE"
     gene            14543..14911
                     /locus_tag="JQ356_001519"
     CDS             14543..14911
                     /locus_tag="JQ356_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HAY4621659.1"
                     /translation="MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELR
                     AGYRLLKNAGCLPPELEQRREAIQLLDILRGIRHDDPQYQEVSRRLSLLELKLRQAGF
                     STDFLRGDYADKLLDKINDN"
     gene            14922..15347
                     /gene="zntR"
                     /locus_tag="JQ356_001520"
     CDS             14922..15347
                     /gene="zntR"
                     /locus_tag="JQ356_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HAY4621660.1"
                     /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD
                     LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC"
     gene            15403..15621
                     /gene="arfA"
                     /locus_tag="JQ356_001521"
     CDS             15403..15621
                     /gene="arfA"
                     /locus_tag="JQ356_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HAY4621661.1"
                     /translation="MSRYQHTKGQIRDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGK
                     HGNRGNWEASGKKVNHFFTTGLLLSGAC"
     gene            complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="JQ356_001522"
     CDS             complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="JQ356_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HAY4621662.1"
                     /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL
                     NRKKEEPAAAPAPTKEEVLLAEIRDLLKEQNNRS"
     gene            complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="JQ356_001523"
     CDS             complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="JQ356_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HAY4621663.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="JQ356_001524"
     CDS             complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="JQ356_001524"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HAY4621664.1"
                     /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
                     QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
                     VEGAIAIKRPQLKGLINGVLRQFQRQQEELLAKFNASDARYLHPSWLLKRLQKAYPEQ
                     WQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
                     ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV
                     DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRHH
                     PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
                     TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK"
     gene            complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="JQ356_001525"
     CDS             complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="JQ356_001525"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HAY4621665.1"
                     /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
                     KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
                     AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS
                     LSAAQLERYIRAFNPWPMSWLEIERQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
                     TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLA"
     gene            complement(19853..20362)
                     /gene="def"
                     /locus_tag="JQ356_001526"
     CDS             complement(19853..20362)
                     /gene="def"
                     /locus_tag="JQ356_001526"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HAY4621666.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
                     RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
                     KLDRLKARA"
     gene            20492..21616
                     /gene="dprA"
                     /locus_tag="JQ356_001527"
     CDS             20492..21616
                     /gene="dprA"
                     /locus_tag="JQ356_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HAY4621667.1"
                     /translation="MVDTDIWLRLMSISSLYGDDMVRIAHWLAKQSHIDAVVLQQTGL
                     TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL
                     YALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN
                     GVSIAVLGNGLNTIHPRRHARLATSLLEHGGALVSEFPLDVSPLAYNFPRRNRIISGL
                     SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
                     EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP
                     VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
     gene            21588..22061
                     /locus_tag="JQ356_001528"
     CDS             21588..22061
                     /locus_tag="JQ356_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HAY4621668.1"
                     /translation="MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNAL
                     LWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLEI
                     REMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            22090..22632
                     /locus_tag="JQ356_001529"
     CDS             22090..22632
                     /locus_tag="JQ356_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621669.1"
                     /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV
                     RPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDET
                     AITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKT
                     AQGVKHFCASKQCGKPVSAE"
     gene            22637..23209
                     /gene="tsaC"
                     /locus_tag="JQ356_001530"
     CDS             22637..23209
                     /gene="tsaC"
                     /locus_tag="JQ356_001530"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HAY4621670.1"
                     /translation="MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVM
                     RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPAT
                     TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
                     AFPVVLGETGGRLNPSEIRDALTGELFRQG"
     gene            23214..24032
                     /gene="aroE"
                     /locus_tag="JQ356_001531"
     CDS             23214..24032
                     /gene="aroE"
                     /locus_tag="JQ356_001531"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HAY4621671.1"
                     /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
                     NTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLQGDNTD
                     GIGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
                     LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHLGIYCYDMFYQKG
                     KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
     gene            24029..24282
                     /locus_tag="JQ356_001532"
                     /pseudo
     CDS             24029..24282
                     /locus_tag="JQ356_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417739.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
     gene            complement(24258..24812)
                     /locus_tag="JQ356_001533"
     CDS             complement(24258..24812)
                     /locus_tag="JQ356_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HAY4621672.1"
                     /translation="MSDVLRPYRDLFPQIGQRVMIDDSSVVIGGVRLADDVGIWPLVV
                     IRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGN
                     RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAG
                     LRYSANNYVKWKDEYLDQGNQTQP"
BASE COUNT         6417 a         5972 c         6546 g         6194 t
ORIGIN      
        1 aaggcagcgg gttttttaat gattcttttc ctctcatgag cagaccaata actacggctc
       61 cgcaagcgaa tgaggcagca aggaaaacca gtcgtggtaa gaaggcccat gaatgccagg
      121 cgccaagggc ggcgagaaac ttcacatcac catagcctaa tccttcttta tgtcgcagta
      181 tgcgataccc ccagtaaatg acagcgaatg tgccgtaacc aacaattgtc ccccataacg
      241 catcggctaa accatcagga tgacaaactt gatagaacaa aagacctgac cagagtaacg
      301 ggcacgtaaa tctgtcaggt aacaagccat gctttgcatc ccagaaaaaa agtagggctg
      361 ataaacaagc gtacaaaatc agaaagggaa gggtagtgtc cataaaacat cctctgtaat
      421 tggagtatca ccatcgaata actccggatg ctcagcaaca gagagagcgc tgatttgtta
      481 acctgattcc ggtgaaaaac gctatcttca caaccttaca aatttcgtgg aatgcagctc
      541 gcaatctgcg cgttgcgatt aatttctacc cgatgcttgc gtcaggctca gatttgcgta
      601 taatgcgcgg gcttgtcgta gttgacagca ggttcaatct gaacctcagt tagccgaatt
      661 tggctaccta acaatgctcc caatcgggga gctacgtaag aacggttaca ctctcccatc
      721 aatcgtaatg ggtctgagga gtaatcattt tcgtttataa aataattgga gctctggtct
      781 catgcagaac caaagaatcc gtatccgcct gaaagcgttt gatcatcgtc tgatcgatca
      841 agcaaccgcg gaaatcgtcg agactgccaa gcgcactggt gcgcaggtcc gtggtccgat
      901 cccgctgccg acacgcaaag agcgcttcac tgttctgatc tccccgcacg tcaacaaaga
      961 cgcgcgcgat cagtacgaaa tccgtactca cttgcgtctg gttgacatcg ttgagccaac
     1021 cgagaaaacc gttgatgctc tgatgcgtct ggatctggct gccggtgtag acgtgcagat
     1081 cagcctgggt taatcaggtc attgagcgat tgagaggttg aaacaatgat tggtttagtc
     1141 ggtaaaaaag tgggtatgac ccgtatcttc acagaagacg gcgtttctat cccagtaacc
     1201 gtaatcgaag ttgaagcaaa ccgcgttact caggttaaag acctggctaa cgatggctac
     1261 cgtgctattc aggtgaccac cggtgctaaa aaagctaacc gtgtgaccaa gcctgaagct
     1321 ggccacttcg ctaaagctgg cgtagaagct ggccgtggtc tgtgggaatt ccgcctggct
     1381 gaaggcgaag agttcactgt aggtcagagc attagcgttg aactgtttgc tgacgttaaa
     1441 aaagttgacg taactggcac ctctaaaggt aaaggtttcg caggtaccgt taagcgctgg
     1501 aacttccgta cccaggacgc tactcacggt aactccttgt ctcaccgcgt tccgggttct
     1561 atcggtcaga accagactcc gggcaaagtg ttcaaaggca agaaaatggc aggtcagatg
     1621 ggtaacgaac gtgtaaccgt tcagagcctt gacgtagtac gcgttgacgc tgagcgcaac
     1681 ctgctgctgg ttaaaggtgc tgtcccgggt gcaaccggta gcgacctgat cgttaaacca
     1741 gctgtgaagg cgtaaggaga tagcaatgga attagtattg aaagacgcgc agagcgcgct
     1801 gactgtttcc gaaactacct tcggtcgtga tttcaacgaa gcgctggttc accaggttgt
     1861 tgttgcttat gcagctggtg ctcgtcaggg tactcgtgct cagaagactc gtgctgaagt
     1921 aactggttcc ggtaaaaaac cgtggcgcca gaaaggcacc ggccgtgcgc gttctggttc
     1981 tatcaagagc ccgatctggc gttctggtgg cgtgaccttt gctgctcgtc cgcaggacca
     2041 cagtcaaaaa gttaacaaga agatgtaccg cggcgcgctg aaaagcatcc tgtccgaact
     2101 ggtacgtcag gatcgtctga tcgttgtcga gaagttctct gtagaagcgc cgaaaactaa
     2161 gctgctggca cagaaactga aagacatggc tctggaagat gtgctgatca tcaccggtga
     2221 gctggacgaa aacctgttcc tggctgcgcg caacctgcac aaggttgacg tacgcgatgc
     2281 aactggtatc gacccggtta gcctgatcgc cttcgacaaa gtcgtaatga ctgctgatgc
     2341 tgttaagcaa gttgaggaga tgctggcatg attcgtgaag aacgtctgct gaaggtgctg
     2401 cgtgcaccgc acgtttctga aaaagcgtct actgcgatgg aaaaatccaa caccatcgta
     2461 ctcaaagttg ctaaagacgc gaccaaagca gaaatcaaag ctgctgtgca gaaactgttt
     2521 gaagtcgaag tcgaagtcgt taacaccctg gtagttaaag ggaaagttaa acgtcacgga
     2581 cagcgtatcg gtcgtcgtag cgactggaaa aaagcttacg tcaccctgaa agaaggccag
     2641 aatctggact tcgttggcgg cgctgagtaa gtcggaggag taatacaatg gcagttgtta
     2701 aatgtaaacc gacatctccg ggtcgtcgcc acgtagttaa agtggttaac cctgagctgc
     2761 acaagggcaa accttttgct ccgttgctgg aaaaaaacag caaatccggt ggtcgtaaca
     2821 acaatggccg tatcaccact cgtcatatcg gtggtggcca caagcaggct taccgtattg
     2881 ttgacttcaa acgcaacaaa gacggtatcc cggcagttgt tgaacgtctt gagtacgatc
     2941 cgaaccgttc cgcgaacatc gcgctggttc tgtacaaaga cggtgaacgc cgttacatcc
     3001 tggcccctaa aggcctgaaa gctggcgacc agattcagtc tggcgttgat gctgcaatca
     3061 aaccaggtaa caccctgccg atgcgcaaca tcccggttgg ttctactgtt cataacgtag
     3121 aaatgaaacc aggtaaaggc ggtcagctgg cacgttccgc tggtacttac gttcagatcg
     3181 ttgctcgtga tggtgcttat gtcaccctgc gtctgcgttc tggtgaaatg cgtaaagtag
     3241 aagcagactg ccgtgcaact ctgggcgaag ttggcaatgc tgagcatatg ctgcgcgttc
     3301 tgggtaaagc aggtgctgca cgctggcgtg gtgttcgtcc gaccgttcgc ggtaccgcga
     3361 tgaacccggt agaccaccca catggtggtg gtgaaggtcg taactttggt aagcacccgg
     3421 taactccgtg gggcgttcag accaaaggta agaagacccg cagcaacaag cgtactgata
     3481 aattcatcgt acgtcgccgt agcaaataat tttagaggat aagccatgcc acgttctctc
     3541 aagaaaggtc cttttattga cctgcacttg ctgaagaagg tagagaaagc ggtggaaagc
     3601 ggagacaaga agcccctgcg cacttggtcc cgtcgttcaa cgatctttcc taacatgatc
     3661 ggtttgacca tcgctgtcca taatggtcgt cagcacgttc cggtatttgt aaccgacgaa
     3721 atggtcggtc acaaactggg tgaattcgca ccgactcgta cttatcgcgg ccacgctgct
     3781 gataaaaaag cgaagaagaa ataaggtagg aggaagagat ggaaactatc gctaaacatc
     3841 gccatgctcg ttcttctgct cagaaggttc gccttgttgc tgacctgatt cgcggtaaga
     3901 aagtgtcgca ggctctggat attttgacct acaccaacaa gaaagcggct gtactggtca
     3961 agaaagttct ggaatctgcc attgctaacg ctgaacacaa cgatggcgct gacattgacg
     4021 atctgaaagt tacgaaaatt ttcgtagacg aaggcccgag catgaagcgc attatgccgc
     4081 gtgcaaaagg tcgtgcagat cgcatcctga agcgcaccag ccacatcact gtggttgtgt
     4141 ccgatcgctg agactctgga gactagcaat gggtcagaaa gtacatccta atggtattcg
     4201 cctgggtatt gtaaaaccat ggaactctac ctggtttgcg aacaccaaag aattcgctga
     4261 caacctggac agcgatttta aagtacgtca gtacctgact aaggaactgg ctaaagcgtc
     4321 cgtatctcgt atcgttatcg agcgtccggc taagagcatc cgtgtaacca ttcacactgc
     4381 tcgcccgggt atcgttatcg gtaaaaaagg tgaagacgta gaaaaactgc gtaaggtcgt
     4441 agcggacatc gctggcgttc ctgcacagat caacatcgcc gaagttcgta agcctgaact
     4501 ggacgcaaaa ctggttgctg acagcatcac ttctcagctg gaacgtcgcg ttatgttccg
     4561 tcgtgctatg aagcgtgctg tacagaacgc aatgcgtctg ggcgctaaag gtattaaagt
     4621 tgaagttagc ggccgtctgg gcggcgcgga aatcgcacgt accgaatggt accgcgaagg
     4681 tcgcgtaccg ctgcacactc tgcgtgctga catcgactac aacacctctg aagcgcacac
     4741 cacttacggt gtaatcggcg ttaaagtgtg gatcttcaaa ggcgagatcc tgggtggtat
     4801 ggctgctgtt gaacaaccgg aaaaaccggc tgctcagcct aaaaagcagc agcgtaaagg
     4861 ccgtaaataa ggagcgtcgc tgatgttaca accaaagcgt acaaaattcc gtaaaatgca
     4921 caaaggccgt aaccgcggtc tggcgcaggg tacggatgtt agcttcggca gcttcggtct
     4981 gaaagctgtt ggccgtggtc gtctgactgc ccgtcagatc gaagcagcac gtcgtgctat
     5041 gacccgtgca gttaagcgtc aaggtaagat ctggatccgt gtgttcccgg acaaaccgat
     5101 cactgaaaag ccgctggcag tgcgtatggg taaaggtaaa ggtaacgtgg agtattgggt
     5161 tgccttgatt cagccgggta aagtcctgta tgaaatggac ggtgttccgg aagagctggc
     5221 ccgtgaagca ttcaagctgg cagcagcgaa actgccgatt aaaaccacct ttgtaactaa
     5281 gacggtgatg taatgaaagc aaaagagctg cgtgagaaga gcgttgaaga gctgaacacc
     5341 gagctgctga acctgctgcg tgagcagttc aacctgcgta tgcaggctgc aagtggccag
     5401 ctgcaacagt ctcacctgtt gaagcaagtg cgtcgcgatg tcgcacgcgt taagacttta
     5461 ctgaacgaga aggctggtgc gtaatgaccg ataaaatccg tactctgcaa ggtcgcgttg
     5521 ttagcgacaa aatggagaaa tccattgttg ttgctatcga acgttttgtg aaacacccga
     5581 tctacggtaa attcatcaag cgtacgacca aactgcacgt acatgacgag aacaacgaat
     5641 gcggtatcgg tgacgtggtt gaaatccgcg aatgccgtcc gctgtccaag actaaatcct
     5701 ggacgctggt tcgcgttgta gagaaagcgg ttctgtaata cagtacactc tctcgatacg
     5761 aataaacggc tcagaaatga gccgtttatt ttttctaccc atatccttga agcggtgtta
     5821 taatgccgcg ccctcgatat ggggattttt aacgacctga ttttcgggtc tcagtagtag
     5881 ttgacattag cggagcacta aaatgatcca agaacagact atgctgaacg tcgccgacaa
     5941 ctccggtgca cgtcgcgtaa tgtgtatcaa ggttctgggt ggctcgcacc gtcgctacgc
     6001 aggcgtaggc gacatcatca agatcaccat caaagaagca attccgcgtg gtaaggtcaa
     6061 aaaaggtgat gtgctgaagg cggtagtggt gcgcaccaag aagggtgttc gtcgcccgga
     6121 cggttctgtc attcgcttcg atggtaatgc ttgtgttctt ctgaacaaca acagcgagca
     6181 gcctatcggt acgcgtattt ttgggccggt aactcgtgag cttcgtagtg agaagttcat
     6241 gaaaattatc tctctggcac cagaagtact ctaaggagcg aatcatggca gcgaaaatcc
     6301 gtcgtgatga cgaagttatc gtgttaaccg gtaaagataa aggtaaacgc ggtaaagtta
     6361 agaatgtcct gtcttccggc aaggtcattg ttgaaggtat caacctggtt aagaaacatc
     6421 agaagccggt tccggccctg aaccaaccgg gtggcatcgt tgaaaaagaa gccgctattc
     6481 aggtttccaa cgtagcaatc ttcaatgcgg caaccggcaa ggctgaccgt gtaggcttta
     6541 gattcgaaga cggcaaaaaa gtccgtttct tcaagtctaa cagcgaaact atcaagtaat
     6601 ttggagtagt acgatggcga aactgcatga ttactacaaa gacgaagtag ttaaaaaact
     6661 catgactgag tttaactaca attctgtcat gcaagtccct cgggtcgaga agatcaccct
     6721 gaacatgggt gttggtgaag cgatcgctga caaaaaactg ctggataacg cagcagcaga
     6781 cctggcagca atctccggtc aaaaaccgct gatcaccaaa gcacgcaaat ctgttgcagg
     6841 cttcaaaatc cgtcagggct atccgatcgg ctgtaaagta actctgcgtg gcgaacgcat
     6901 gtgggagttc tttgagcgcc tgatcactat tgctgtacct cgtatccgtg acttccgtgg
     6961 cctgtccgct aagtctttcg acggtcgtgg taactacagc atgggtgtcc gtgagcagat
     7021 catcttccca gaaatcgact acgataaagt cgaccgcgtt cgtggtttgg atattaccat
     7081 taccactact gcgaaatctg acgaagaagg ccgcgctctg ctggctgcct ttgacttccc
     7141 gttccgcaag taaggtaggg ttactaaatg gctaagcaat caatgaaagc acgcgaagta
     7201 aaacgcgtag ctttagctga taaatacttc gcgaaacgcg ctgaactgaa agcgatcatc
     7261 tctgatgtga acgcttccga cgaagatcgt tggaacgctg ttctcaagct gcagactctg
     7321 ccgcgtgatt ccagcccgtc tcgtcagcgt aaccgctgcc gtcaaacagg tcgtccgcat
     7381 ggtttcctgc ggaagttcgg gttgagccgt attaaggtcc gtgaagccgc tatgcgcggt
     7441 gaaatcccgg gtctgaaaaa ggctagctgg taattgtcac caattgaatc acgggagtaa
     7501 agacagatga gcatgcaaga tccgatcgcg gatatgctga cccgtatccg taacggtcag
     7561 gccgcgaaca aagctgcggt caccatgcct tcctccaagc tgaaagtggc aatcgccaac
     7621 gtgctgaagg aagaaggttt tattgaagat tttaaagttg aaggcgacac caagcctgaa
     7681 ctggaactta ctctgaagta tttccagggc aaagctgttg tagaaagcat tcagcgtgtc
     7741 agccgcccag gtctgcgcat ctataaacgt aaagatgagc tgccgaaagt tatggcgggt
     7801 ctgggtatcg cagttgtttc tacctctaaa ggtgttatga ctgatcgtgc agcgcgccag
     7861 gctggtcttg gtggcgaaat tatctgctac gtagcctaat cggaggaaaa aatgtctcgt
     7921 gttgctaaag caccggtcgt tgttcctgcc ggcgttgacg taaaaatcaa cggtcaggtt
     7981 attacgatca aaggtaaaaa cggcgagctg actcgtactc tcaacgatgc tgttgaagtt
     8041 aaacatgcag ataataccct gaccttcggt ccgcgtgatg gttacgcaga cggttgggca
     8101 caggctggta ccgcgcgtgc cctgctgaac tcaatggtta tcggtgttac cgaaggcttc
     8161 actaagaagc tgcagctggt tggtgtaggt taccgtgcag cggttaaagg taatgtgatt
     8221 aacctgtctc tgggtttctc tcatcctgtt gaccatcagc tgcctgcggg tatcactgct
     8281 gaatgtccga ctcagactga aatcgtgctg aaaggcgctg ataagcaggt gatcggccag
     8341 gttgcagcgg atctgcgcgc ctaccgtcgt cctgagcctt ataaaggcaa gggtgttcgt
     8401 tacgccgacg aagtcgtgcg tatcaaagag gctaagaaga agtaaggtaa cactatggat
     8461 aagaaatctg ctcgtatccg tcgtgcgacc cgcgcacgcc gcaagctcca ggagctgggc
     8521 gcaactcgcc tggtggtaca tcgtaccccg cgtcacattt acgcacaggt aattgcacct
     8581 aacggttctg aagttctggt agctgcttct actgtagaaa aagctatcgc tgaacaactg
     8641 aagtacaccg gtaacaaaga cgcggctgca gctgtgggta aagctgtcgc tgaacgcgct
     8701 ctggaaaaag gcatcaaaga tgtatccttt gaccgttccg ggttccaata tcatggtcgt
     8761 gtccaggcac tggcagatgc tgcccgtgaa gctggccttc agttctaagg tagaggtgta
     8821 agatggctca catcgaaaaa caagctggcg aactgcagga aaagctgatc gcggtaaacc
     8881 gcgtatctaa aaccgttaaa ggtggtcgta ttttctcctt cacagctctg actgtagttg
     8941 gcgatggtaa cggtcgcgtt ggttttggtt acggtaaagc gcgtgaagtt ccagcagcga
     9001 tccagaaagc gatggaaaaa gcccgtcgca atatgattaa cgtcgcgctg aataacggca
     9061 ctctgcaaca ccctgttaaa ggtgttcaca cgggttctcg cgtattcatg cagccggctt
     9121 ccgaaggtac cggtatcatc gccggtggtg caatgcgcgc cgttctggaa gtcgctgggg
     9181 ttcataacgt tctggctaaa gcatatggtt ccaccaaccc gatcaacgtg gttcgtgcaa
     9241 ctattgatgg cctggaaaat atgaactctc cagaaatggt cgctgccaag cgtggtaaat
     9301 ccgttgaaga aattctgggg aaataaacca tggcaaagac tattaaaatt actcaaaccc
     9361 gcagtgcaat cggtcgtctg ccgaaacaca aggcaacgct gcttggcctg ggtctgcgtc
     9421 gtattggtca caccgtagag cgcgaggata ctcctgctat tcgcggtatg atcaacgcgg
     9481 tttccttcat ggttaaagtt gaggagtaag agatgcgttt aaatactctg tctccggccg
     9541 aaggctccaa aaaggcgggt aaacgcttgg gtcgtggtat cggttctggc ctcggtaaaa
     9601 ccggtggtcg tggtcacaaa ggtcagaagt ctcgttctgg cggtggcgta cgtcgcggtt
     9661 tcgagggtgg tcagatgcct ctgtaccgtc gtctgccgaa attcggcttc acttctcgta
     9721 aagcagcgat tacagccgaa gttcgtctgt ctgacctggc taaagtagaa ggcggtgttg
     9781 tagacctgaa cacgctgaaa gcggctaaca ttgtcggtat ccagatcgag ttcgcgaaag
     9841 tgatcctggc tggcgaagta acgactccgg taactgttcg tggcctgcgt gttactaaag
     9901 gcgctcgtgc tgctatcgaa gctgctggcg gtaaaatcga ggaataagta gcagatggct
     9961 aaacaaccgg gattagattt tcaaagtgcc aaaggtggct taggcgagct gaaacgcaga
    10021 ctgctgtttg ttatcggtgc gctgattgtg ttccgtattg gctcttttat tccgatccct
    10081 ggtattgatg ccgctgtact tgccaaactg cttgagcaac agcgaggcac catcattgag
    10141 atgtttaaca tgttctctgg tggtgctctc agccgtgctt ctatctttgc tctggggatc
    10201 atgccgtata tttcggcgtc gatcattatc cagctgctga cggtggttca cccaacgttg
    10261 gcggaaatta agaaagaagg ggagtctggt cgtcgtaaga tcagccagta cacccgctac
    10321 ggtactctgg tgctggcaat attccagtcg atcggtattg ctaccggtct gccgaatatg
    10381 cctggtatgc aaggcctggt gattaacccg ggctttgcat tctacttcac cgctgttgta
    10441 agtctggtca caggaacgat gttcctgatg tggttgggcg aacagatcac tgaacgaggt
    10501 atcggcaacg gtatttcaat cattatcttc gccggtattg tcgcgggact cccgccagcc
    10561 attgcccata ctatcgagca agcgcgtcaa ggcgacctgc acttcctcgt gttgctgttg
    10621 gttgcagtat tagtatttgc agtgacgttc tttgttgtat ttgttgagcg tggtcaacgc
    10681 cgcattgtgg taaactacgc gaaacgtcag caaggtcgtc gtgtctatgc tgcacagagc
    10741 acacatttac cgctgaaagt gaatatggcg ggggtaatcc cggcaatctt cgcttccagt
    10801 attattctgt tcccggcgac catcgcgtca tggttcgggg gcggtactgg ttggaactgg
    10861 ctgacaacaa tttcgctgta tttgcagcct gggcaaccgc tttatgtgtt actctatgcg
    10921 tctgcaatca tcttcttctg tttcttctac acggcgttgg ttttcaaccc gcgtgaaaca
    10981 gcagataacc tgaagaagtc cggtgcattt gtaccaggaa ttcgtccggg agagcaaacg
    11041 gcgaagtata tcgataaagt aatgacccgc ctgaccctgg ttggtgcgct gtatattacc
    11101 tttatctgcc tgatcccgga gttcatgcgt gatgcaatga aagtaccgtt ctacttcggt
    11161 gggacctcac tgcttatcgt tgttgtcgtg attatggact ttatggctca agtgcaaact
    11221 ctgatgatgt ccagtcagta tgagtctgca ttgaagaagg cgaacctgaa aggctacggc
    11281 cgataattgg tcgcccgaga agttacggag agtaaaaatg aaagttcgtg cttccgtcaa
    11341 gaaattatgc cgtaactgca aaatcgttaa gcgtgatggt gtcatccgtg tgatttgcag
    11401 tgccgagccg aagcataaac agcgccaagg ctgatttttt cgcatatttt tcttgcaaag
    11461 ttgggttgag ctggctagat tagccagcca atcttttgta tgtctgtgcg tttccatttg
    11521 agtatcctga aaacgggctt ttcagcatgg aacgtacata ttaaatagta ggagtgcata
    11581 gtggcccgta tagcaggcat taacattcct gatcataagc atgccgtaat cgcattaact
    11641 tcgatttatg gcgtcggcaa gacccgttct aaagccatcc tggctgcagc gggtatcgct
    11701 gaagatgtta agatcagtga gctgtctgaa ggacaaatcg acacgctgcg tgacgaagtt
    11761 gccaaatttg tcgttgaagg tgatctgcgc cgtgaaatca gcatgagcat caagcgcctg
    11821 atggatcttg gttgctatcg cggcttgcgt catcgtcgtg gtctcccggt tcgcggtcag
    11881 cgtaccaaga ccaacgcacg tacccgtaag ggtccgcgca aaccgatcaa gaaataatcg
    11941 gggtgattga ataatggcaa aggcaccaat tcgtgcacgt aaacgtgtaa gaaaacaagt
    12001 ctctgacggc gtggctcata tccatgcttc tttcaacaac accatcgtga ctatcactga
    12061 tcgtcagggt aacgcgttgg gttgggcaac agccggtggt tccggtttcc gtggttctcg
    12121 caaatccact ccgtttgcag ctcaggttgc agcagagcgt tgcgctgacg ccgtgaaaga
    12181 atacggcatc aagaatctgg aagttatggt taaaggtccg ggtccaggcc gcgaatctac
    12241 tattcgtgct ctgaacgccg caggtttccg catcactaac attactgatg tgactccgat
    12301 ccctcataac ggttgtcgtc cgccgaaaaa acgtcgcgta taacgcctcg ttttccaggt
    12361 ttgttggaga aagaaaatgg caagatattt gggtcctaag ctcaagctga gccgtcgtga
    12421 gggcaccgac ttattcctta agtctggcgt tcgcgcgatc gataccaagt gtaaaattga
    12481 acaagctcct ggccagcacg gtgcgcgtaa accgcgtctg tctgactatg gtgtgcagtt
    12541 gcgtgaaaag caaaaagttc gccgtatcta tggtgtgctg gagcgtcagt tccgtaacta
    12601 ctacaaagaa gcagcacgtc tgaaaggcaa caccggtgaa aacctgttgg ctctgctgga
    12661 aggtcgtctg gacaacgttg tataccgtat gggcttcggt gccactcgtg cagaagcacg
    12721 tcagctggtt agccataaag caattatggt aaacggtcgt gttgttaata tcgcttctta
    12781 tcaggttagt ccgaatgacg ttgtaagcat tcgtgagaaa gcgaagaagc agtctcgcgt
    12841 gaaagccgct ctggagctgg ctgagcagcg tgaaaagcca acttggctgg aagttgatgc
    12901 tggcaagatg gaaggtacgt ttaagcgtaa gccggagcgt tctgatctgt ctgcggacat
    12961 taacgaacac ctgatcgtcg agctttactc caagtaaagc ttagtaccaa agagaggaca
    13021 caatgcaggg ttctgtgaca gagtttctaa aaccgcgcct ggttgatatc gagcaagtga
    13081 gttcgacgca cgccaaggtg acccttgagc ctttagagcg tggctttggc catactctgg
    13141 gtaacgcact gcgccgtatt ctgctctcat cgatgccggg ttgcgcggtg accgaggttg
    13201 agattgatgg tgtactacat gagtacagca ccaaagaagg cgttcaggaa gatatcctgg
    13261 aaatcctgct caacctgaaa gggctggcgg tgagagttca gggcaaagat gaagttattc
    13321 ttaccttgaa taaatctggc attggccctg tgactgcagc cgatatcacc cacgacggtg
    13381 atgtcgaaat cgtcaagccg cagcacgtga tctgccacct gaccgatgag aacgcgtcta
    13441 ttagcatgcg tatcaaagtt cagcgcggtc gtggttatgt gccggcttct acccgaattc
    13501 attcggaaga agatgagcgc ccaatcggcc gtctgctggt cgacgcatgc tacagccctg
    13561 tggagcgtat tgcctacaat gttgaagcag cgcgtgtaga acagcgtacc gacctggaca
    13621 agctggtcat cgaaatggaa accaacggca caatcgatcc tgaagaggcg attcgtcgtg
    13681 cggcaaccat tctggctgaa caactggaag ctttcgttga cttacgtgat gtacgtcagc
    13741 ctgaagtgaa agaagagaaa ccagagttcg atccgatcct gctgcgccct gttgacgatc
    13801 tggaattgac tgtccgctct gctaactgcc ttaaagcaga agctatccac tatatcggtg
    13861 atctggtaca acgtaccgag gttgagctcc ttaaaacgcc taaccttggt aaaaaatctc
    13921 ttactgagat taaagacgtg ctggcttccc gtggactgtc tctgggcatg cgcctggaaa
    13981 actggccacc ggcaagcatc gctgacgagt aaccggatca caggttaagg ttttactgag
    14041 aaggataagg tcatgcgcca tcgtaagagt ggtcgtcaac tgaaccgcaa cagcagccat
    14101 cgccaggcta tgttccgcaa tatggcaggt tcactggttc gtcatgaaat catcaagacg
    14161 actctgccta aagcgaaaga gctgcgccgc gtagttgagc cgctgattac tcttgccaag
    14221 actgatagcg ttgctaatcg tcgtctggca ttcgcccgta ctcgtgataa cgagatcgtg
    14281 gcaaaactgt ttaacgaact gggcccgcgt ttcgcgagcc gtgccggtgg ttacactcgt
    14341 attctgaagt gtggcttccg tgcaggcgac aacgcgccga tggcttacat cgagctggtt
    14401 gatcgttcag agaaagcaga agctgctgca gagtaatctg aagcaacgta aaaaaacccg
    14461 ccccggcggg tttttttata cccgtagcat ccccacttat ctacaatagc tgtactcttt
    14521 ttgttcatcc cctggagtat ttatgtggtt acttgaccag tgggcagagc gtcatatagc
    14581 agaagcgcaa gcgaaaggtg agtttgataa tctggcaggt agcggcgaac cattgatact
    14641 ggatgatgat tctcatgtgc caccggaatt acgtgcgggg tatcgcttgc tgaagaatgc
    14701 tggttgctta ccgccagaac ttgagcagcg gagggaagca attcagcttc tggatatcct
    14761 gagaggtatc cgtcacgatg atccgcaata tcaagaggtt agccgtcgat tgtcattact
    14821 ggaattgaag ctgcgacaag ctggatttag taccgatttt ttacgcggcg attatgctga
    14881 caagttgttg gacaaaatca acgataacta gtggagtatg tatgtatcgc attggtgagc
    14941 tggcaaaaat ggcggaagta acacctgaca cgattcgtta ttacgaaaaa cagcagatga
    15001 tggagcatga agtgcgtact gaaggcgggt ttcgcctgta taccgaaagc gatctccagc
    15061 gattgaaatt tatccgccat gccagacaac taggtttcag tctggagtcg atccgcgagt
    15121 tgctgtcgat ccgcatcgat cctgaacacc atacctgtca ggagtcaaaa ggcattgtgc
    15181 aggaaagatt gcaggaagtc gaagcacgga tagccgagtt gcagagtatg cagcgttcct
    15241 tgcaacgcct taacgatgcc tgttgtggga ccgcccatag cagtgtttat tgttcgattc
    15301 ttgaagctct tgaacaaggg gcgagtggcg ttaagagtgg ctgttgattt tttgcactgg
    15361 caggattaca ctcgcgccgt aaaataacca attggagttt ttatgagccg atatcagcat
    15421 actaaagggc agataaggga taatgcgata gaagcattac tacatgatcc cttattccga
    15481 cagcgcgtag agaaaaataa gaaggggaaa ggcagttaca tgcgaaaagg aaaacatggc
    15541 aatcggggga actgggaggc cagtggcaag aaagtaaatc acttttttac cactggtctt
    15601 ctgctttcag gcgcttgtta agagcggtta ttctgctctt tcagcaaatc acgaatttct
    15661 gccagtaata cttcttcttt agttggtgca ggtgcggcag ctggttcttc ttttttccga
    15721 ttcagtttgt tgattagctt aatcgccata aagatggcaa aggccacaat cagaaaatca
    15781 aagacgtttt gaatgaagac accgtaatgc atcacaacag cagggatatc cccctgcgca
    15841 tcgcgtagcg tgacagcaaa ctgtttaaag tcgatcccgc caattaataa gcccagaggt
    15901 ggcatgatga tatcggcaac cagtgaagat acaatcttcc cgaatgccgc accgataatg
    15961 acacccaccg ccaaatccac cacgttcccg cgcatcgcaa attcgcgaaa ttctttaata
    16021 atgctcatgt tattctccct atgaagccga caaccataag tctaacaaat gttaagccat
    16081 tttcctgcca ggaatgaatt taattaatcc ttgataatca aagggaaata ataaggcgtc
    16141 attagacgcc ttattaatta caagaagaaa gggcttggct ggaagagtct ttcgacgtcg
    16201 gtaataaact ttttatctgt gaggaacata attacgtgat cgccttgctc aatgcgcaga
    16261 ttgtcattgg caatcatcac gtcgtttcca cgtaccaccg ctccaataat cgttcctggc
    16321 ggtagcttga tttcgtcaat gactctgccg acaacgcgtg aggtgctttc atcaccgtga
    16381 gcaacggctt caatagcttc tgctacgccg cggcgcaatg aggaaacacc aacaatatct
    16441 gcttttcgca catggctaag caacgcagaa atagttgctt gttgtggtga aattgcaata
    16501 tcgatcacgc tcccctgaac cagatccaca taagcgcgac gctggatcaa taccatcacc
    16561 tttttcgcac ccatacgttt ggcaagcatg gcggacatga tattggcctc gtcatcgttg
    16621 gtgacggcaa taaacagatc aacttgatcg atatgttctt cggccagcag ttcttgatcc
    16681 gacgcatcac caaaaaagac gatcgtattc tgcaactttt ccgccagttc ggcagcgcgc
    16741 tgctgattac gttcgatgag tttaacgctg taatcttttt ccagacgacg cgccagccct
    16801 gcaccgatat taccgccacc aaccagcatg atccgcttat acggtttttc cagtcgctgt
    16861 aattcactca tcaccgcgcg gatatgctgt gaagcggcaa taaagaacac ttcatcacca
    16921 gcttcaacaa tggtcgaacc ttgtggacga atggggcgat cgtggcggaa aattgctgcc
    16981 acacgagtat cgatatgtgg catatgttcg cgcatggtcg aaagtgcatt accaatcagc
    17041 gggccgccat aataggcttt aactacagcg aggctgactt taccctcagc gaagttcacc
    17101 acctgcaatg cgcctggata ctcaatcagt cggtaaatat tatcgataac caactgctct
    17161 ggtgcgatca gatgatcaat cggtacagca tctgaatgaa atagcttatc ggcatcgcgt
    17221 acgtagtctg gtgagcggat gcgagcgatg cgattagggg tgttgaaaag tgagtaggct
    17281 acctggcagg caaccatatt ggtttcatct gaactggtta cagcaaccag catatcggcg
    17341 tcgtcggcac ctgcctcccg caatacgcgt ggatgagagc catgcccctg cacgactcgc
    17401 aggtcaaatt tatcctgcaa ggtccgcaga cgctcaccgt tggtatcgac aacagtaata
    17461 tcgttgttct cgccaaccag gttttccgcc agtgtgccgc caacctggcc ggcacccaga
    17521 atgataattt tcatcagtct cgacccgtta tctcatcact ttttgattag cttagcgtaa
    17581 aagaagccgt cgccctcttc ggcaccaggc agattttgtt tacccggttg ctctggtgtt
    17641 cctgtttcgc aaagttcggc atcagcggta cgttgcaaaa aagctttaat ctgcaggcta
    17701 ttctcttccg gtaacaccga acaggtggca tagaccaggg ttccaccgga ttttaaatgc
    17761 ggccaaatgg cgtcgagaat ttcagactgc aattgcgcga gttccgggat atcgcgatcg
    17821 cgacgtaacc atttaatatc cggatggtga cgaatcaccc ccgttgctga acaaggcgca
    17881 tctaataaaa tgcgatcaaa ctgttgctcg ccacaccatt gggaagggta acggccatca
    17941 ccttgtttca cggttgcctt cataccaagg cgttttaaat tgtcgtaaac gcgagagagg
    18001 cgctgttcgt caatatcaac cgcaacaacc tgcgcttctg gtgccacctc aaggatatgc
    18061 gttgttttac cgccgggggc ggcacaaaga tccagaatgt gttcaccgtt ttgtggcgca
    18121 agccaggtca tgcaaccttg tgctgatgca tcctgaacgg taacccatcc gtcttcaaaa
    18181 ccaggtagcg catgaacagg tgcaggtgtt tccagacgta cagcatcagg gtaatccgca
    18241 tgcgggaaac ctttcattcc tgcttcatcc agcaatgcaa gccagctgtc gcgggaatga
    18301 tgcgtacgat taacgcgcag ccacattggc ggacgctggt tattggcttc gacgatggat
    18361 tgccactgct ctggatacgc tttttgcaga cgcttcagca accaggaagg atgcagataa
    18421 cgtgcatcac tggcattaaa cttggctaat aactcttctt gctgacgctg gaactggcgt
    18481 aatacaccgt taatcaaccc tttaagttgc ggacgcttaa ttgcgatagc gccttcaacc
    18541 gtttcagcca gcgcagcatg aggtggaatg cgggtataaa gcagttgata caaaccaacc
    18601 ataatcaggt aatgcacagt gcgctgtttg ccggtcatcg gacgggccat taacttatta
    18661 atcagccagt ctaactgcga aagcgtacgc agtacgccaa agcacaactc ttgaagaagt
    18721 gctttgtctt tatcagaaac tttttgctgg agcggtggca gaatgttgct taatgattgc
    18781 ccttgctcga cgacttgttc aacggcctgg gccgccatgc tacgtaaatt acgttgtttt
    18841 ttcataagta taaaaatgcc cggtaagacc gggcttagaa gagtggacta tcaggccaga
    18901 cggttgcccg gaacaaacca ttcccgacga gaattcagga ggtcttgcgc gctcatcgct
    18961 ttcttacccg caggttgtaa cgagagcaga ttcaggattc catcaccagt tgcaacctga
    19021 atgccttgtt tgttggcttc aaggatcgtt cctggtgcag cgttggttgc cgtatcaatg
    19081 accgacgctt tccagacttt aaccggctgt ctttcaattt ccagccagct cattggccat
    19141 ggattgaaag cgcgaatgta gcgttcaagc tgtgctgccg aaagtgacca gtcaatacgc
    19201 gcttcttctt tactcaactt ttcggcgtaa gtgacaagag tttcgtcctg aacttctggt
    19261 ttcgccgtgc cgtctgccag ttgtttcaac gtggtgataa gcccttgtgg gccaagctct
    19321 gccagcttgt cgtacagcgt accactggta tcttctgcag taatcgggca ggagagctta
    19381 tagagcatgt caccggtgtc taaaccgaca tccatttgca taatggtcac accagtttct
    19441 gcatcacccg cccatagtga gcgttggatt ggtgcagcac cgcgccagcg tggcagcagt
    19501 gaaccatgaa cgttgataca gccaagacgc ggcatctcca gcactgcttt aggcagaatt
    19561 aagccatagg cgacgacgac cataacatca gcctgcagat cggcgaccag ttgctggttt
    19621 tcttgtggac gcagggaaac aggttgaaaa acgggcagac ctttttcctc agccagaact
    19681 ttaaccgggc tgggcatcag ttttttaccg cgtcctgccg gtcggtctgg ctgggtgaac
    19741 acgccaacga cgttatgacc agaagacaac agcgcgtcga gatgacgcgc tgcaaagtca
    19801 ggtgtacccg caaaaataat acgtagtgat tctgacacgt tagttcttat ccttaagccc
    19861 gggctttcag acgatccagt ttttcaactt tctgacgaat acgttgttgt ttcaacggtg
    19921 acagataatc cataaacagt ttgccgacca ggtgatccat ctcatgctga atacagatgg
    19981 ctaacagacc gtctgcttcc aattcaaatg gtttaccgtc gcggtccagg gcgcgaattt
    20041 taactttctc tgcgcgtggc actaaagcac gttgttcagg gatcgacagg caaccttctt
    20101 caatgcctgt ttcgccgctt ttttctaaaa gctccggatt gattaacacc agccgttcgt
    20161 cacggttttc cgaaacatca ataacaatga tacgttgatg gatatcaacc tgggttgccg
    20221 ccaggccaat accttcttct gcgtacatcg tctcgaacat atcatcgacg atacgctgaa
    20281 tttctgcatt cacttcttct accggtttag caactttgcg aagccgctcg tccggaatat
    20341 gtaacacttg caaaactgac ataaatctcc agagatgtgt tcaggagtta gaaagattat
    20401 ttcttctatt ctagacaaat ccccctctga ttgacagcat cactgaccaa tcgcaaagat
    20461 tgctaaggct gcttatggca gggagataag gatggtcgat acagatattt ggctgcgttt
    20521 aatgagcatc agcagcttgt acggcgatga tatggtccgt atagctcact ggctggcaaa
    20581 acagtcgcat attgatgcgg ttgtattgca gcaaacaggg cttacattgc ggcaggcaca
    20641 acgctttctt tcatttccgc gaaagagtat cgaaagctca ctttgttggt tggagcaacc
    20701 caaccatcat ttaatccctg cggacagcga attttatcct cctcaacttc tggcgacgac
    20761 agattacccc ggcgcactgt ttgttgaagg agaactgtac gcgctgcatt catttcagct
    20821 tgccgtagtg gggagtcggg cgcattcatg gtatggcgag cgatggggac gattattttg
    20881 cgaaactctg gccacgcgtg gagtgacaat tacgagtgga ctggcgcgtg gaatcgatgg
    20941 tgtggcgcat aaagcggcct tacaggtaaa tggcgtcagc attgctgtat tggggaacgg
    21001 acttaatacc attcatccgc gccgccatgc ccgactggct accagtttgc ttgaacatgg
    21061 tggggcactt gtctcggaat ttcccctcga tgtttcaccc cttgcttaca atttcccacg
    21121 aagaaatcgc attatcagtg gtctaagtaa aggtgtactg gtggtggaag cggctttgcg
    21181 cagtggttcg ttggtgacag cacgttgtgc gcttgagcag gggcgtgaag tttttgcctt
    21241 gccaggacca atagggaatc cgggaagcga agggcctcac tggttaataa aacaaggtgc
    21301 gattcttgtg acggaaccgg aagaaattct ggaaaacttg caatttggat tgcactggtt
    21361 gccagacgcc cctgaaaatt cattttattc accagatcag caagacgtgg cattgccatt
    21421 tcctgagctc ctggctaacg taggagatga ggtaacacct gttgacgtcg tcgctgaacg
    21481 tgccggccaa cctgtgccag aggtagttac tcaactactc gaactggagt tagcaggatg
    21541 gatcgcagct gtacccggcg gctatgtccg attgaggagg gcatgccatg ttcgacgtac
    21601 taatgtattt gtttgaaacc tatattcaca cagaagctga gttgcgtgtg gatcaagaca
    21661 aacttgaaca ggatcttacc gacgcaggat ttgatcgaga agatatctac aatgccctgc
    21721 tttggctgga aaagcttgcg gattatcagg aaggactgac agaaccgatg caactggcct
    21781 ctgatccact ctccatgcgt atttataccc ctgaggagtg tgaaagactg gatgccagct
    21841 gtcgtggttt tctgcttttc cttgagcaaa ttcaggtgct taaccttgaa atccgtgaaa
    21901 tggtgataga gcgagtgctc gcgctggata ccgcagagtt cgacctggaa gacctgaaat
    21961 gggtaatcct gatggtgttg ttcaatattc cgggctgcga aaatgcgtac cagcaaatgg
    22021 aagaattact ctttgaagtg aatgaaggta tgctgcatta atcatttctt taattcagca
    22081 taagttgtta tggcgaaatc agcactgttc acggtgcgta ataatgagtc ctgcccaaag
    22141 tgcggggctg aactggttat tcgatccggg aaacacggtc cgtttcttgg atgctcacag
    22201 tatccggcgt gtgactacgt ccgtcctctg aaatcttcag cggatggaca tattgtcaaa
    22261 gttctggagg ggcaggtttg ccctgcatgt ggcgcaaatc tggtattacg ccagggacgc
    22321 tttggtatgt ttattggttg cagtaactac cctgaatgcg aacataccga acttatcgat
    22381 aaaccggacg aaacagcaat tacatgcccc caatgtcgga cgggccatct ggtccagcgc
    22441 cgctcccgtt atggcaaaac atttcactcc tgtgatcgct acccggagtg tcaatttgcc
    22501 attaacttca aacccatagc tggagaatgc cctgagtgtc attatccact actcatcgaa
    22561 aagaaaaccg cgcagggtgt aaaacacttt tgtgccagta aacaatgtgg aaagccggtt
    22621 tcggcggaat aataacgtga ataataacct gcaaggagac gctatcgcag ctgcgataga
    22681 tgtcctcaat gaagaacgtg tcatcgccta tccaacggaa gccgttttcg gtgttgggtg
    22741 cgatcctgat agcgaaacag cagtgatgag actgttggag ttaaaacagc gtccggttga
    22801 taaggggctg attttaatcg cggcaaatta cgagcagctt aaaccctata ttgatgacac
    22861 catgctgact gatgcgcagc gtgaaaccat tttttcccgc tggccaggtc ctgtcacctt
    22921 tgtctttccc gcgcctgcga caacaccgcg ctggttgacg ggccgctttg attcgcttgc
    22981 tgtacgagtc accgaccatc cgttggtggt tgctttgtgc caggcttatg gtaaaccgct
    23041 ggtttctacc agtgccaact tgagtggatt gccaccttgt cgaacagtag acgaagttcg
    23101 cgcacaattt ggcgcggcgt tcccggttgt gcttggtgaa acgggggggc gtttaaatcc
    23161 ttcagaaatc cgcgatgccc tgacgggtga actgtttcga caggggtaac ataatggaaa
    23221 cctatgctgt ttttggtaat ccgatagccc acagcaaatc gccattcatt catcagcaat
    23281 ttgctcagca actgaatatt gaacatccct atgggcgcgt gttggcaccc atcaatgatt
    23341 tcatcaacac actgaacgct ttctttagtg ctggtggtaa aggtgcgaat gtgacggtac
    23401 cttttaaaga agaggctttt gccagagcgg atgagcttac tgaacgggca gcgttggctg
    23461 gtgctgttaa taccctcaag cggttagaag atggacgctt gcagggtgac aataccgatg
    23521 gtataggttt gttaagcgat ctggaacgtc tgtcttttat ccgtccgggt ttacgtattc
    23581 tgcttatcgg cgctggtgga gcatctcgcg gcgtactact accactcctt tccctggact
    23641 gtgcggtgac aatcactaat cggacggtat cccgtgcgga agagttggct aaattgtttg
    23701 cgcacactgg cagtattcag gcgttgggta tggacgaact ggaaggtcat gagtttgatc
    23761 tcattattaa tgcaacatcc agtggcatca gtggtgatat tccggcgatc ccgtcatcgc
    23821 tcattcatct aggcatttat tgctatgaca tgttctatca gaaaggaaaa actccttttc
    23881 tggcatggtg tgagcagcga ggctcaaagc gtaatgctga tggtttagga atgctggtgg
    23941 cacaggcggc tcatgccttt cttctctggc acggtgttct gcctgacgta gaaccagtta
    24001 taaagcaatt gcaggaggaa ttgtccgcgt gaatcaggcc atccagtttc cggacaggga
    24061 agagtgggac gagaaaaatg tgtatgtttt cccgctctcg tgaatggtat gcaactgaca
    24121 tgcgcgatct ctggcgagag tctggcgtat cgctttactg gagatacgcc agaacagtgg
    24181 ttagcgagtt ttcgtcagca tcgctgggac ctggaagaag aagcggaaaa cttaattcag
    24241 gaacaaagtg aagatgatca aggctgggtc tggttaccct gatccagata ttcgtccttc
    24301 catttcacgt aattattcgc ggaatagcgt aacccagcct tctcttcatc acttaacggg
    24361 cggatctgtt tgacggggct accgagatac agatatccgc tctccagccg tttattttgt
    24421 gggaccagac tacccgcacc aatcatcaca tcatcttcta ctattgcgcc atcaagtaaa
    24481 attgagccca tcccaaccaa aactcgattg ccaatggtgc agccgtggag catcaccttg
    24541 tgaccaacag tgacatcttc gccaatggtt aatgggttgc catctgggtt gtacgaggat
    24601 ttatgagtga catgcaacat actgccatcc tggatattgg tgcgtgctcc gatctgtaca
    24661 taatgtacat ctccacgaat cacaacgagc ggccagatcc ccacatcatc agccagacga
    24721 acgccaccaa tcacgacact gctatcgtcg atcattacgc gctgaccgat ttgtggaaaa
    24781 agatcgcggt atgggcgtaa aacatcagac atacttacct cagcaataaa tgatttacta
    24841 atgactttgg gggcattatt ggccttgtgc aagtctttta gtatgcaaaa aagcaccgtt
    24901 ttgtgtgcga ttgcagcaaa aagggtgaaa aaacaacaaa cagaaaaaaa gatcaaaaaa
    24961 atacttgtgc aaaatattgg gatccctata atgcgcctcc gttaagacga caacgtgaaa
    25021 cacttcacag gatggtcgga acaacgaaga gaaaaaatcc tgaaattcag ggttgactct
    25081 gaaagaggaa agcgtaatat acgccacctc gcgacagtga gctgaaagc
//
LOCUS       DADKRT010000044        25010 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.044, whole genome shotgun sequence.
ACCESSION   DADKRT010000044 DADKRT010000000
VERSION     DADKRT010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25010
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.044"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..808
                     /locus_tag="JQ356_001534"
     CDS             <1..808
                     /locus_tag="JQ356_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY4621673.1"
                     /translation="PRWLMSRGKQEQAESILRKIMGNTLATQAVQEIKHSLDHGRKTG
                     GRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVIN
                     LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF
                     AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHN
                     GFSYWIYGCMGVLAALFMWKFAPETKGKTLEELEALWEPETKKTQQTATL"
     gene            complement(852..1250)
                     /gene="psiE"
                     /locus_tag="JQ356_001535"
     CDS             complement(852..1250)
                     /gene="psiE"
                     /locus_tag="JQ356_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HAY4621674.1"
                     /translation="MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLAD
                     VLFAPEQTSKYELVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHK
                     SPLDVLIYSAAILLLVITLWLCNSKRLKRE"
     gene            complement(1376..1519)
                     /locus_tag="JQ356_001536"
     CDS             complement(1376..1519)
                     /locus_tag="JQ356_001536"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621675.1"
                     /translation="MFQRNIVDFSRIAGGWESPEWVIFELPAWVRFVLPDAPPGAAYP
                     AYG"
     gene            1520..1798
                     /locus_tag="JQ356_001537"
     CDS             1520..1798
                     /locus_tag="JQ356_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621676.1"
                     /translation="MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSN
                     VSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH"
     gene            complement(1845..3941)
                     /locus_tag="JQ356_001538"
     CDS             complement(1845..3941)
                     /locus_tag="JQ356_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY4621677.1"
                     /translation="MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPT
                     ARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTY
                     KDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
                     LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIGGSQMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFN
                     DLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNVGLADPQIQAKGDTLYVTGE
                     QVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEP
                     LGHETKLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMG
                     MADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSA
                     KDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITNVLKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
                     KFQLYDMTSDRSVNFR"
     gene            complement(3941..4678)
                     /locus_tag="JQ356_001539"
                     /pseudo
     CDS             complement(3941..4678)
                     /locus_tag="JQ356_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418452.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
     gene            complement(4675..5313)
                     /locus_tag="JQ356_001540"
     CDS             complement(4675..5313)
                     /locus_tag="JQ356_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HAY4621678.1"
                     /translation="MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDI
                     QNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLI
                     EVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDET
                     LVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ"
     gene            complement(5427..5669)
                     /locus_tag="JQ356_001541"
     CDS             complement(5427..5669)
                     /locus_tag="JQ356_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621679.1"
                     /translation="MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSA
                     TSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
     gene            complement(6131..7780)
                     /gene="pgi"
                     /locus_tag="JQ356_001542"
     CDS             complement(6131..7780)
                     /gene="pgi"
                     /locus_tag="JQ356_001542"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HAY4621680.1"
                     /translation="MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSAT
                     FDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALR
                     NRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDL
                     GPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELKDDKEISSHDSSTNGLINRYKAWRG"
     gene            8305..9654
                     /gene="lysC"
                     /locus_tag="JQ356_001543"
     CDS             8305..9654
                     /gene="lysC"
                     /locus_tag="JQ356_001543"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HAY4621681.1"
                     /translation="MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAA
                     ALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVA
                     ALAELAALQLLPRLNDGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVD
                     IWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE"
     gene            9906..10178
                     /locus_tag="JQ356_001544"
     CDS             9906..10178
                     /locus_tag="JQ356_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
                     /protein_id="HAY4621682.1"
                     /translation="MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKK
                     EYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR"
     gene            complement(10311..11183)
                     /gene="rluF"
                     /locus_tag="JQ356_001545"
     CDS             complement(10311..11183)
                     /gene="rluF"
                     /locus_tag="JQ356_001545"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HAY4621683.1"
                     /translation="MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGD
                     QVKPGDIVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIENSSSEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASN
                     GKRFTSPGRKKKGR"
     gene            11531..12478
                     /locus_tag="JQ356_001546"
                     /pseudo
     CDS             11531..12478
                     /locus_tag="JQ356_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709812.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
     gene            12548..13354
                     /locus_tag="JQ356_001547"
     CDS             12548..13354
                     /locus_tag="JQ356_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY4621684.1"
                     /translation="MQTWLNLQDKIIIVTGGASGIGLAIVEELLAQGANVQMVDIHGG
                     DGQYEGHKGYQFWPTDISSAKEVNHTVAEIIQRFGRIDGLVNNAGVNFPRLLVDEKAP
                     AGQYELNEAAFEKMVNINQKGVFLMSQAVARQMVKQHDGVIVNVSSESGLEGSEGQSC
                     YAATKAALNSFTRSWSKELGKHGIRVVGIAPGILEKTGLRTPEYEEALVWTRNITVEQ
                     LREGYTKNAIPIGRAGRLAEVADFVCYLLSERASYITGVTTNIAGGKTHG"
     gene            13364..13771
                     /locus_tag="JQ356_001548"
     CDS             13364..13771
                     /locus_tag="JQ356_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sorbose transporter subunit IIA"
                     /protein_id="HAY4621685.1"
                     /translation="MVNAIFCAHGKLACAMLESVQMVYGDARVEAVEFVPGENAGDIV
                     AKLEKLVSIHNQDEWLIAVDLQCGSPWNAAAMLAMRNPRLRVISGLSLPLALELVDNQ
                     DSMNVDELCEHLTQIAKQTCVVWKQLATAEEDF"
     gene            13771..14265
                     /locus_tag="JQ356_001549"
     CDS             13771..14265
                     /locus_tag="JQ356_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HAY4621686.1"
                     /translation="MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRR
                     TLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIDTL
                     NIGGMAWRPGKKQLTKAVSLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQ
                     LIAN"
     gene            14331..15128
                     /locus_tag="JQ356_001550"
     CDS             14331..15128
                     /locus_tag="JQ356_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY4621687.1"
                     /translation="MEISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILG
                     DLKTGIILGGTLELIALGWMNVGAAQSPDSALASIISAILVIVGQQSIATGIAIALPV
                     AAAGQVLTVFARTITVVFQHAADKAAEEARFRTLDILHVSAFGVQALRVAIPALIVSL
                     FVSADMVSNMLSAIPEFVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGG
                     YLDLSLLAFGGVGVIMALVYIQLNPQWRKAEPQLQATASTALDQLDD"
     gene            15139..15981
                     /locus_tag="JQ356_001551"
     CDS             15139..15981
                     /locus_tag="JQ356_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000437910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HAY4621688.1"
                     /translation="MEQRKITRSDLVSMFLRSNLQQASFNFERIHGLGFCYDMIPAIK
                     RLYPLKEDQVAALRRHLVFFNTTPAVCGPVIGVTAAMEEARANGAEIDDGTINGIKVG
                     LMGPLAGVGDPLVWGTLRPITTALGASLALSGNILGPLLFFFIFNAVRLAMKWYGLQL
                     GFRKGVNIVSDMGGNVLQKLTEGASILGLFVMGVLVTKWTSINVPLVVSQTHAADGST
                     VTMTVQNILDQLCPGLLALGLTLLMVRLLNKKINPVWLIFALFGLGIIGNALGFLSRF
                     FAPA"
     gene            16015..17244
                     /locus_tag="JQ356_001552"
     CDS             16015..17244
                     /locus_tag="JQ356_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HAY4621689.1"
                     /translation="MKTTALRLYGKRDLRLETFDLPEMQEDEILATVVTDSLCLSSWK
                     EANLGENHKKVPDDVATNPIIIGHEFCGDILAVGKKWQHKFQPGQRYVIQANLQLPDR
                     PDCPGYSFPWVGGEATHVVIPNEVMEQDCLLAYDGETYFEGSLVEPLSCVIGAFNANY
                     HLQEGSYNHTMGIRPQGRMLILGGTGPMGLLAIDYALHGPVNPSQLVITDTDNDKLSY
                     ARKHYPSEPQTLIHYLNAADAAFDTLMALSGGHGFDDIFVFVPNEGLVTLASSLLATD
                     GCLNFFAGPQDKHFSAPINFYDVHYAFTHYVGTSGGNTDDMRAAVKLIEEKKVQAAKV
                     VTHILGLNAAGETTLELPAVGGGKKLVYTGKYLPLTSLTQIQDQALAAILARHQGIWS
                     GEAEQYLLTHAEAISHD"
     gene            17627..18316
                     /gene="pepE"
                     /locus_tag="JQ356_001553"
     CDS             17627..18316
                     /gene="pepE"
                     /locus_tag="JQ356_001553"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HAY4621690.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQ
                     TWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGL
                     LAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTN
                     ALPEGHKGETREQRIRELLVVAPELTIIGLPEDNWITVSKGHATLGGPNTTYVFKAGE
                     EAVPLEAGHRF"
     gene            complement(18407..20038)
                     /locus_tag="JQ356_001554"
     CDS             complement(18407..20038)
                     /locus_tag="JQ356_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HAY4621691.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTAALTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVI
                     YFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALAN
                     AARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEE
                     LAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQ
                     LLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMQRLNSLFCSVAYSVLEQSDEDEGRDEY"
     gene            complement(20258..23946)
                     /gene="metH"
                     /locus_tag="JQ356_001555"
                     /pseudo
     CDS             complement(20258..23946)
                     /gene="metH"
                     /locus_tag="JQ356_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000096005.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
     gene            24146..24970
                     /gene="iclR"
                     /locus_tag="JQ356_001556"
     CDS             24146..24970
                     /gene="iclR"
                     /locus_tag="JQ356_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418442.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate bypass operon transcriptional
                     repressor IclR"
                     /protein_id="HAY4621692.1"
                     /translation="MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSV
                     ALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLL
                     AIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASG
                     AGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHAL
                     GLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR"
BASE COUNT         5882 a         6615 c         6533 g         5980 t
ORIGIN      
        1 tcctcgctgg ctgatgtcac gcggcaagca agaacaggcg gaaagtatcc tgcgcaaaat
       61 tatgggcaac acgcttgcaa ctcaggcagt acaggaaatt aaacactccc tggatcatgg
      121 ccgcaaaacc ggtggtcgtc tgctgatgtt tggcgtgggc gtgattgtca tcggcgttat
      181 gctctccatc ttccagcaat ttgtcggcat caatgtggtg ctgtactacg cgccggaagt
      241 gttcaaaacg ctgggggcca gcacggatat cgcgctgttg cagaccatta ttgtcggagt
      301 tatcaacctc accttcaccg ttctggcaat tatgacggtg gataaatttg gtcgtaagcc
      361 actgcaaatt atcggcgcac tcggaatggc aatcggtatg tttagcctcg gtaccgcgtt
      421 ttacactcag gcaccgggta ttgtggcgct actgtcgatg ctgttctatg ttgctgcctt
      481 tgccatgtcc tggggtccgg tatgctgggt actgctgtcg gaaatcttcc cgaatgctat
      541 tcgtggtaag gcgctggcaa tcgcggtggc ggcccagtgg ctggcgaact acttcgtctc
      601 ctggaccttc ccgatgatgg acaaaaactc ctggctggtg gcccatttcc acaacggttt
      661 ctcctactgg atttacgggt gtatgggcgt tctggcagca ctatttatgt ggaaatttgc
      721 cccggaaacc aaaggtaaaa cccttgagga gctggaagcc ctctgggaac cggaaacgaa
      781 gaaaacacaa caaactgcta cgctgtaatc ttcctgtcca gcacgccgcg ccagttcggc
      841 gtgctgtctt tttactcccg cttcagccgt ttcgaattac acagccacag agtgatcacc
      901 agtaacagga tcgcagccga gtagatcaac acatccagtg gcgatttatg atcgacgatg
      961 atcaagcgca caatggcggt gatcccaata tagacaaagt aacgtagcgg gaagtgaaaa
     1021 ccggactgaa agtacttcac aatcagcgcg ataaattcga aatagagaaa gtaaaccacc
     1081 agctcatatt tgctggtttg ttctggcgcg aacagcacat ctgccagatg caccgtttct
     1141 ttgccgagga agacaaccaa aatcaggccg aggcacagca ggccaagatt gagtacggtc
     1201 tgcaaaatgg tggagataaa ctccacgcgc ggacgagaga gtgacgtcat agcagtacct
     1261 ccttcacagt ggcgagcttc ctgtataacg caaaaatgtg acggagatct atattttttg
     1321 tgtatgtttt gttcaacctg gatttggagc gcgcctccac caaagccgga tatacctacc
     1381 cgtaggccgg ataagccgcg cctggcggcg catccggcaa gacaaaccgc acccaagccg
     1441 gtaattcaaa aatcacccat tcaggtgatt cccagccacc agcaatgcgc gaaaaatcga
     1501 caatgttcct ctggaacaaa tgaaacgtaa cctgataaag gtggtaaaaa tgaagcctta
     1561 ttttgctgct ttgatgttat cagtctctgt tcttcctgct tatgctggtc cgctcggtac
     1621 tgctgataaa gccgacctac cgcaaagcaa tgtctccagc ccaatgatgg cccagtcgct
     1681 caggcaacca gacctgcaac cgatatcgac ggacaggaag acagaatgtt ttcgccttta
     1741 cacaccagat cgcaaaccgg gggtgaactg cgttcctgat ggctcgacag gccattaaga
     1801 atgaaggtgc cagtgagtgc gaaaactggc acctttccca tgacttagcg gaaattgacg
     1861 ctacggtcgc tggtcatgtc atacaactgg aacttacgcc caagttgctg accaccgtca
     1921 cgcgtcagcg gcgtccagcc aatcgccgca cggctgcgtg tcgggccaga cgagaagaga
     1981 tccaacggta ccgagacata cacgcctttg gtgaagtccc cttcgccgta ctcctctttc
     2041 aaaacgttgg tgatcgtggc atagccaccc accaccacgc cgctgtcaaa gcgtttggcg
     2101 atctccagcg tgccgccttt atcccctgcc agatactgcc cgacgctggc tttcaccaac
     2161 acgtcctggg cgaaagatgg cgtccagtag gcggtcagat gtccggtttt cacgctgtag
     2221 tcggtgaatt tcatcatatc ttttgcacta cgccagtcgc gctgtttaac gtagttggca
     2281 tccagaccaa acgcccagtt actgtccagc ggacgataca acacttcggc ccccgcaccg
     2341 ccaaacatgg tttcgagata acctccatag acctgaccgt agaagccgtt gcccagatgc
     2401 tggaagtagt tggcttgcag gttattcaca tagacatcgt tctgcacata ctcgcgcaca
     2461 tgggtacgaa cgcgcggtaa gtgcgagtcc tgcggcggat tggtgtagtt aaacttgtcg
     2521 tagttgttgg caagatttgc aaacaggctg ccggtggtca gcagatggtc cgtcagccac
     2581 aaatctgcca ttcccatcac gcccagctga tacatgtaaa agttttccgg gccaccgacc
     2641 gactggttca gcaccggatc gatatggaaa tcaaagcgtg atttgtcgat ataccagccc
     2701 tgctcggtgg actgcggaac cactggctcg acgcgttttt gcgccagctt cgtttcgtgg
     2761 cccaacggct ctccggcgag atgatttttc aggctggcga catcggtttc cgtcgtcacc
     2821 tgcggcatgt taagacgatt ttccgtaatg cggatcgttt tgatcccatc cggcagatcg
     2881 ttcatcacga tccgattagc acggatgatc ccttcgcgcg aatcacgata tttcacctgc
     2941 tcgccggtga catacagcgt atcgcctttc gcctggatct gcggatcggc aagtccgaca
     3001 ttgtatttca acagcgttaa ctgattcgcc accaccgaat gctgcaaaat ggcatcctgc
     3061 ggctgcggtt gatattgcgg gcgggcgtta tcgttgtaag acgggcgcag atcgttaaag
     3121 ttggtgcgca gcgtgacgcc aaacataaag gtgttgccac gttcatagct aaggttaacg
     3181 tcggcccaat cggtaacgcg ataaatcgca ccgacgttaa acttactttt ttgctccagc
     3241 ttcccggcaa aatcctgctg ataattattg ccttcatact ccagtttcag gcgcagcggt
     3301 tgccagggcg tctggtattc cacgccgcca aacagtgagg caggaccgtg gaacatctgg
     3361 ctaccgccga tagatcccgc ctgtttgtag ctgttatcgc gatagcaata tttatcactg
     3421 gctgaacaga gcggattttt cacattaccg ctggtgccca gataacccca gcccaggccg
     3481 agcgtaaaat cgaacggccc ccaggctttg ctggcaacaa gatattccgc atcaaacagc
     3541 cccgtaccgc cgatatccct cgcaccaacc gccacttgcg gcagccagta actctcttcc
     3601 cacaaacgca gtttgagatc gaaggcttta tctttatacg tttgatcgcc agagaacgct
     3661 tcgacgctgc tgtactgccg ggtgcgcacg tcggtgtagc gcagcgttgt ttccagccac
     3721 gggaagagtt gcactgaagc tgagtaataa cggtactgat cgttatcgcg atagttcagg
     3781 ctcaactccc cttcccgcgc catgcgtgcg gtgggcgttt gtaataatcc tacgccaccg
     3841 aaatccgact gcgacgggcc aatgggcgca ggatatgttt cgccgtagca agccatgcta
     3901 atgcccagcg ccagtaagct aagcagatgt ctttttttca ttattggggt atccgctgcg
     3961 tcagagtctg aagaatgtcg gcgttaaggg catcaggcgt ctcactccag acggagtccg
     4021 cgaggccaac ataaataatg ctgccgggca tcggctctac gtgacgcttg ttccagtaag
     4081 ccaccggcgc tttttgcgtg cgtccgtccg ggtaaaccac ccacgcgtag ctgcgatccg
     4141 caccgctaag caggttctgc ccggagagat agctcgccac gtcgcgacct ggagtgaatg
     4201 gctgcttgct aggacggctg ataagcccga acaacgtgac cgtggacggc ggtggtccga
     4261 cccacagcgt gtagttgccc tgcaacggtg ggttaccgcg ttcggcaacg cgcacgatat
     4321 cgggatcaag attgattttt tgcctgcccg tcactttcaa cgcctgaatt tgctggcgta
     4381 aggcgttaat ggcggcggca tcgtcggcgc tggagtctgc ggcctgttca gccagccgtg
     4441 tcagcaacgc ctgctgctga cgcaatgctg ccgccgttgc cagctcttcg ctaatcaccg
     4501 caccgggcca ccagttgttt gccagccgcg gttagcctac cagatcgatt aaatgctctg
     4561 cgcctgttag tgttttggcc tcactgctgc cattgctgaa caccttgacg gttcctgccg
     4621 cgaagaccga tgacgctccc acactcaaaa gcaacgcgac aaaagtttgt ttaatcattg
     4681 ttttgccgcc ttgatgagag tggttttcac cgggaaataa tccgcgccga gatactgttc
     4741 cgactggcga atttgccctt cgctgtcgat ccagtagcgg ttatgccagc gcgcctggtc
     4801 ggtggagact tcttcgtcca gcacgcgaac caaggtttca tcgctgccga ctttgacggt
     4861 atcggtgcca tcccatttga agactgagcg tgcggtggcg tagcgtacct gctggtactc
     4921 ggtccagccc atcgtgcgcg tccatgttgc accatcaaca atttgtgcgg gtttaatcag
     4981 cgggtcggcg gcaaggttat tcacttcaat caggttgtcg ccgccaagca aagtcttcac
     5041 cagacgacca tgttgtgtga caagagtggc ttgatcctga gtgacccatt tttgttgtcc
     5101 gtcttcagcg aaggccagca ccacaaacaa ttgcggcccg ccattaagct gcatgtactg
     5161 gctggcgtag ggcatatttt gaatatcatc gtccgtcagc tgtacgcctg gcgtgccgaa
     5221 cagactgtcc cacagtgaat tgcccagctc tttagtcgtg gctgaacagg cctgtaatag
     5281 caggcagata agaatgagtg caggtcgctt cacgactctt ctccagaggg gcagaataac
     5341 cacaccggag tgtggttatg gtaaatccct tcatacttca agccacagat gcaatgactc
     5401 aaattatttt ggggatacat actttattac tgggtactgg tggtcgtggt tgtggtggtc
     5461 ccggtattag aaccatcacc gccaccggtt gccgcgagcg cgacacccac cgccgagctt
     5521 acggtgctga cgctggtcgc ggaggaacta cccgccgaaa ccgacgttgc tgccgaccct
     5581 gccgcttcgc ccacctgtac aggtgcagcc cacgcagaag tcgccgcaag cgcagatatg
     5641 gcaaaaatgc catacagaac ttttttcata acaatttccc ttcattgaat gaatggagat
     5701 ttacccaaaa acatttcggg cgggatcgag tatacacaac taaagcatgc gaattacggc
     5761 gcggggaatt agcgatggcg ttttaggata attggaatga atatcaaata taagcttcaa
     5821 cttatattta aataacaata aaaatcataa acttaaaata aaaacaaaag taattaatct
     5881 gcgtattctc cgaaataaac aacgattaaa aatctatttt aggattaacc tcacggtatg
     5941 atttccgtta aatcacagac aaggggattt atctgataaa acaatgccga cttattgtcg
     6001 gcattgtttt taaggttatt taactcctca tactatgcat taatgtcgat attggcatca
     6061 ggctccggtt gccggatgcg gcgtaaacgc cttatccggc ctacatatcg gcatcaggca
     6121 cgcatgatga ttaaccgcgc cacgctttat agcggttaat cagaccattg gtcgagctat
     6181 cgtggctgct gatttctttg tcatctttca gctctggcag aatacggttc gccagttgtt
     6241 tacccaactc cacgccccac tggtcgaagg taaagatgtt caggatcacg ccctgagtaa
     6301 agattttgtg ctcatacagc gcaatcaacg cccccaggct gaacggagtg atttcgcgca
     6361 gcaggatgga gttggtcggg cggttacctt cgaacacttt gaacggcacc acgtagtcaa
     6421 gcgttgccgg atctttaccc tgatcgcgat attcctgctc aaccacttcg cgggatttac
     6481 caaacgccag cgcttcggtc tgggcgaaga agttagacag cagtttctgg tggtgatcag
     6541 agagcgggtt atgggtgata gccggggcga tgaaatcgca cggtaccatt ttggttccct
     6601 ggtggatcag ctggtagaac gcgtgctgac cgttagtgcc tggttcaccc cagataatcg
     6661 ggccagtctg gtaatccaca acgttaccgt tacggtcaac atacttaccg ttggactcca
     6721 tattgccctg ctggaagtac gccgcgaaac ggtgcatata ctggtcatac ggcagaatcg
     6781 cttcagtttc cgcaccaaag aaattgttgt accagatgcc aatcagcgcc agcaggacag
     6841 gcaggttttt ctcggcaggc gtggtggaga aatgcttgtc catcgcgtgt gcgccagaaa
     6901 gcagttcaac gaagttatca aagccgatgg agagaacaat cgacaggcca atcgctgacc
     6961 acaaagagta acggccgccg acccagtccc agaactcgaa catgttggca gtatcaatac
     7021 caaactcgcc aacggctttg gcattggtgg aaagcgccgc aaagtgtttt gcaacgtgtt
     7081 tttcatcacc tgccgctttc aggaaccagt cacgcgcgct atgggcgttg gtcatagttt
     7141 cctgagtggt gaaggtttta gatgctacca agaacagcgt ggtttccggg tttacttttt
     7201 tcagcacttc agcgatgtga gtcccatcga cgttagaaac aaagtgcatg ttcaggtgat
     7261 ttttgtacgg acgcagtgct tcggtcacca tgtacgggcc gaggtcagaa ccaccgatcc
     7321 cgatgttcac tacgtcagtg attgctttgc cggtataacc cttccactca ccggagataa
     7381 tcgcttccga gaaggttttc atcttctcca gcaccgcgtt gacttccggc attacgtctt
     7441 tgccatcaac cagaatcggg gtattgctac ggttacgcag cgctacgtgc agcacggcgc
     7501 ggttttcagt gcggttgatc ttctcgccag agaacatcga cttaatcgcg cccgccagat
     7561 cgcactcttt cgccagatcc tgtaatttcg ccagcgtctc ttcagtgatg cggtttttgg
     7621 agtaatccac cagcatctga tcgtcgaatg ttgcggagaa cttagaaaaa cgatcgccgt
     7681 ctttagcaaa aagatcggcg atcgtaacgt ctttcatttc atcgaagtgt ttctgtagtg
     7741 cctgccaggc agcggtctgc gttggattga tgtttttcat tagcaatact cttctgattt
     7801 tgagaattgt gactttggaa gattgtagcg ccagtcacag aaaaatgtga tggttttagt
     7861 gccgttagcg taatgttgag tgtaaaccct tagcgcagtg aagcatttat tagctgaact
     7921 actgaccgcc aggagtggat gaaaaatccg catgaccccg tcgttgacaa ccgccccgct
     7981 caccctttat ttataaatgt actacctgcg ctagcgcagg ccagaagagg cgcgttgccc
     8041 aagtaacggt gttggaggag ccagtcctgt gataacacct gagggggtgc atcgccgagg
     8101 tgattgaacg gctggccacg ttcatcatcg gctacagggg ctgaatcccc tgggttgtca
     8161 ccagaagcgt tcgcagtcgg gcgtttcgca agtggtggag cacttctggg tgaaaatagt
     8221 agcgaagtat cgctctgcgc ccacccgtct tccgctcttc ccttgtgcca aggctgaaaa
     8281 tggatcccct gacacgaggt agttatgtct gaaattgttg tctccaaatt tggcggtacc
     8341 agcgtagctg attttgacgc catgaaccgc agcgctgata ttgtgctttc tgatgccaac
     8401 gtgcgtttag tagtcctctc ggcttctgct ggtatcacta atctgctggt cgctttagcg
     8461 gaagggctgg aacctggcga gcgattcgaa aaactcgacg ctattcgcaa catccagttt
     8521 gccattctgg aacgtctgcg ttacccgaac gttatccgtg aagagattga acgtctgctg
     8581 gagaacatta ctgttctggc agaagcggcg gcgctggcaa cgtctccggc gctgacagat
     8641 gagctggtca gccacggcga gctgatgtcg accctgctgt ttgtcgaaat cctgcgcgaa
     8701 cgcgatgttc aggcacagtg gtttgatgta cgtaaagtga tgcgtaccaa cgaccgattt
     8761 ggtcgtgcag agccagatgt agccgcgctg gcggaactgg ccgcgctgca gctgctccca
     8821 cgcctcaatg acggcttagt gatcacccag ggatttatcg gtagcgaaaa taaaggtcgt
     8881 acaacgacgc ttggccgtgg aggcagcgat tatacggcag ccttgctggc ggaggcttta
     8941 cacgcatctc gtgttgatat ctggaccgac gtcccgggca tctacaccac cgatccacgc
     9001 gtagtttccg cagcaaaacg cattgatgaa atcgcgtttg ccgaagcggc agagatggca
     9061 acttttggtg caaaagtact gcatccggca acgttgctac ccgcagtacg cagcgatatc
     9121 ccggtctttg tcggctccag caaagaccca cgcgcaggtg gtacgctggt gtgcaataaa
     9181 actgaaaatc ctccgctgtt ccgcgcgctg gcgcttcgtc gcaatcagac tctgctcact
     9241 ttgcacagcc tgaatatgct gcattctcgc ggcttcctcg cggaagtttt cggcatcctc
     9301 gcgcggcata atatttcggt agacttaatc accacgtcag aagtgagcgt ggcattaacc
     9361 cttgatacca ccggttcaac ctccactggc gatacgttgc tgacgcaatc tttgctgatg
     9421 gagctttccg cactgtgccg ggtggaagta gaagaaggtc tggcgctggt cgcgttgatt
     9481 ggcaatgacc tgtcaaaagc ctgcggcgtt ggcaaagagg tattcggcgt actggaaccg
     9541 ttcaacattc gcatgatttg ttacggcgca tccagccata acctgtgctt cctggtgccc
     9601 ggcgaagatg ccgagcaggt ggtgcaaaaa ctgcatagta atttgtttga gtaaatactg
     9661 tatggcctgg aagctatatt tcgggccgta ttgattttct tgtcactatg cttatcaata
     9721 aacgagcctg tactctgtta accaacgtct ttatcgagaa taattgcctt taattttttt
     9781 atctgcatct ctaattaatt atcgaaagag ataaatagtt aagagaaggc aaaatgaata
     9841 ttatcagttc tgctcgcaaa cgaattcccg tacactgaac tctctggctc actgagggca
     9901 ccatcatggc actcccccgt attacccaaa aagagatgac tgaacgcgag cagcgtgaac
     9961 ttaaaacact gctggatcgg gcgcggattg cgcatggtcg cgtactgacc aactccgaaa
    10021 ccaacagcat taagaaagag tacatcgata aattaatggt cgagcgtgag gctgaagcga
    10081 aaaaagcccg ccaattgaag aaaaagcagg cttataaacc ggatcctgaa gcgtcattta
    10141 gctggtcagc aaatacgtcg acgcgcggca ggcgctaatg aacaatcaac gcctgagatt
    10201 ttcactcgtc tgtgtggaca caatcttccc ctcaccctaa ccctctcccc gaaggggcga
    10261 ggggactgtc cgagctcttt ttggacgttt tcatcagtct gaggcgttaa tcagcgtccc
    10321 ttctttttac gccccggcga ggtaaaacgc ttaccgttgg acgccgggcg accgcctttt
    10381 tccgccgttt tttccatctt aacgactgga cgtttgatgc ccgctgtttt cggtttggcc
    10441 ttcgctttag gttttgcctc ggaagaggaa ttttcgatga gcttaaagag gtcgattaac
    10501 tcatcgtcgg ttaaatcgcg ccactccccc agcggaatgc cgcttaagct gacgttcata
    10561 atgcgcgtac gttccagctt tttcacttca tagccgaaat gctcgcacat gcgccggatc
    10621 tgacggttca gcccctgcac cagggtaatg cggaagacaa acggcgcttc ttttttgact
    10681 ttgcactttt tcgtcaccgt cccgaggatc ggcacccccg cccccatacc acgaataaat
    10741 tcatcggtaa tcggtttatc gaccgtcacc agatactctt tctcatgatc gttacccgca
    10801 cggaggatct tattcaccag atcgccgtga ttggtgagga aaatcagccc ctgggagtct
    10861 ttatccaggc ggccaatcgg gaacacgcgt ttgctgtggt taacgaaatc gacaatgtta
    10921 tcgcgctcgc catcttcggt ggtgctgaca ataccgacgg gcttgttcag ggcgataagt
    10981 accaaatctt cggcttcccg aggctcaatc aactgaccgt ttactttcac aatgtcgccg
    11041 ggtttcacct gatcgccaat ggtggctcgc ttgccattaa ggaacacatt gccttgctcg
    11101 atatagcgat ccgcttcgcg gcgtgagcaa attccgcttt cgctgatgta tttatttaaa
    11161 cggactgatg agtcgggcag cataaattct cctgtaaaac gcggaatata ccgtacctct
    11221 tagcggggaa aaacagggtt atgcggcaac gtcgaaatta aatgtgatct gccacgcctt
    11281 ttatcacaaa agtgtctccg gaagtacgat gcaaatttgc ctggcaaaat aaggataatc
    11341 aacatattac gaatcgctgc acacctgtgc tgatgactac tacgcagaga aacaaatgtg
    11401 caagagaaag cgctatatct ccccatgcaa agagtgaaaa atcgctttga aaggccctca
    11461 tgatggggtt atatcagatc aagcggtgag aaagcatatt tgcacaaatg tgcagaacca
    11521 ggaggcggca atggaaaaca gtgacgatat ccgtttgatt gtgaagattg cccaactcta
    11581 ttacgaacag gatatgacgc aggcgcaaat cgcgcgcgaa ctgggtattt accgcaccac
    11641 catcagccgc ttgcttaaac gaggccgcga tcagggaatt gtcaccatcg ccatcaacta
    11701 tgactacaac gaaaatctct ggctggagca gcaactgaag caaaagtttg gcctgaaaga
    11761 cgttgtggtg gtgtcgggaa atgatgagga tgaagagact caactggcga tgatggggtt
    11821 acacggcgcg caactgctgg atcgcttgct ggagcctggc gatattgtcg gtttttcctg
    11881 gggtcgcgcg gtgagcgcac tggttgaaaa cttgccgcag gcggggcaat cgcggcagtt
    11941 aatctgcgta ccaattattg gcggaccgtc cggtaaactc gaaagccgct atcatgtaaa
    12001 cacattaacc tacagcgcgg cagcgaagct gaaaggggaa tcgcatctcg cggattttcc
    12061 ggctctgctg gataacccat taattcgtaa tgggatcatg cagtctcagc actttaaaac
    12121 catctctgcc tactgagata atctggatgt cgccctggtg ggaattggct caccggccat
    12181 tcgcgacggc gctaactggc atgcgtttta tggtggtgaa gagagtgacg acctgaatgc
    12241 ccgccaggtt gctgacgata tttgctcgcg cttttttgat attcacggcg caatggttga
    12301 aacgaatatg agcgaaaaaa cactctctat cgaaatgaat aaattaaagc aggcacgata
    12361 ttccattggc attgccatga gtgaagaaaa atacagcgga attgttggtg cactgcgtgg
    12421 aaaatatatt aattgtctga taacgaatag cagcacagct gaactattac tgaaataaaa
    12481 atcttcccga tgtttagcgt aataaaaatt acggcggggc cctattatct aaaatcagga
    12541 gtctgttatg caaacgtggt taaatttgca ggataaaatc attattgtca ccggcggcgc
    12601 atccggtatt ggtctggcga ttgtagagga attattagca caaggcgcaa acgtacagat
    12661 ggtagatatt cacggtggcg atggtcaata tgaaggtcat aaaggctatc agttttggcc
    12721 gaccgatatt tccagcgcca aagaggtaaa tcatacggta gcggaaatta tccagcgttt
    12781 tggtcgcatc gacggtctgg tcaataacgc cggggtcaat ttcccgcgtc tgctggtcga
    12841 tgagaaagcg cctgccgggc agtatgaact caacgaagct gcattcgaaa aaatggtcaa
    12901 tatcaaccag aaaggcgttt ttctgatgtc gcaggcggtg gcgcgacaga tggtcaaaca
    12961 acatgatggc gtgattgtga atgtttcctc agaaagtgga ctggaaggct cagaaggcca
    13021 aagctgttac gccgctacca aagccgcgct taatagcttc acgcgatcct ggtcgaaaga
    13081 attgggtaaa cacggtatcc gtgtggtcgg tatcgcgccg gggattctgg aaaaaacagg
    13141 actgcgcacg ccggaatatg aagaagcgct ggtgtggacg cgcaatatca ccgtcgagca
    13201 gctgcgtgaa ggctatacca aaaacgccat tcctattggg cgcgccggaa gattagcaga
    13261 agtcgctgat tttgtttgtt atctgctgtc tgaacgcgcc agctatatca ccggagtaac
    13321 cactaacatt gcgggcggca aaacgcacgg ctaaggaggc tttatggtca atgccatttt
    13381 ttgcgcccac ggcaaattag cttgcgccat gctggaatcg gttcagatgg tgtacggcga
    13441 cgccagggtc gaggcagttg aatttgtgcc cggcgagaac gccggagaca tcgtagcaaa
    13501 gctggaaaag ttagtaagca ttcacaatca agatgagtgg ctgattgccg tggatttaca
    13561 gtgcggcagc ccgtggaatg cggcagcgat gcttgcgatg cgcaatcctc gtctgcgggt
    13621 aatcagcggc ctttctctgc cgctggcgct cgaactggtt gataaccagg acagcatgaa
    13681 tgttgatgaa ctgtgtgaac acctgacgca aatcgcaaag caaacctgcg ttgtctggaa
    13741 acaactggca acggcagagg aggatttctg atgaacatta cgctcgcccg cattgatgac
    13801 cgcctgatcc acggtcaggt cactaccgtc tggtcgaaag tggctaacgc ccagcgcatt
    13861 attatctgca atgacgaagt ttataacgat gaagttcgcc ggacattatt gcgtcaggct
    13921 gcgccaccgg gaatgaaggt taacgtggtc aatattgaaa aagccgtcgc tgtttatcac
    13981 aacccgcaat atcaggacga aaccgttttt tatcttttca ctcgcccaca ggatgcctta
    14041 gcgatggttc gccaaggggt aaaaatagac accctaaata ttggcggcat ggcctggcgg
    14101 cccggtaaaa aacagttaac caaagcggtt tcattagatg atgatgatat taacgcattt
    14161 catgagttaa ataatcttgg cgtcatactg gatttacgcg tcgtagcgtc agatccctca
    14221 atcaatatta tcgacaaaat aaacgaacag ttaatcgcaa attaaataat agcgcttgtg
    14281 tacatatgct ttaacaggca gggatgacga cacttaaaag gtgaaaaatc atggaaataa
    14341 gtaccctaca aatcattgct atatttcttt tttcctgtat tgccggaatg ggcagcgtgc
    14401 tggatgaatt tcagactcat cgcccgttaa ttgcctgtac ggtgattggt ttaattctcg
    14461 gtgatttaaa aaccggaata atactcggtg gtacgctgga attgatagct ctcggctgga
    14521 tgaacgtcgg cgcggcgcaa tctccggatt ctgcactcgc cagcataatc tccgccattc
    14581 tggttatcgt tggtcagcaa agcatcgcca ccggaatcgc catcgcgttg cctgtggctg
    14641 cggcaggcca ggtgctgact gtgtttgccc gtaccatcac cgtagtgttc cagcacgcgg
    14701 cggataaagc agcggaagaa gcacggtttc gcactctcga tattctgcat gtctccgcgt
    14761 ttggcgtgca ggcgctgcgc gttgctattc cggcactgat tgtctcactg ttcgtcagcg
    14821 ccgatatggt gagcaatatg ctgagcgcga taccggaatt cgtgacgcgc ggtctgcaaa
    14881 ttgctggcgg ttttatcgtg gtggtcggtt acgccatggt gctacgtatg atgggcgtga
    14941 aatatttgat gcctttcttt ttcctcggtt tcctcgcagg tggctacctc gatctcagtc
    15001 tgctggcgtt cggtggcgtc ggcgtgatca tggccctggt ctacatccag ctaaatccac
    15061 agtggcgtaa agctgaacct caactccagg ccaccgcctc caccgccctt gaccaacttg
    15121 acgattaacg gagccatcat ggaacagaga aaaattacac gcagcgatct ggtgagcatg
    15181 tttctgcgct ccaacctgca acaggcgtcc tttaactttg aacgtattca cgggctgggt
    15241 ttttgctacg acatgatccc cgccatcaaa cgactttacc cattaaaaga ggatcaggtt
    15301 gcggcgctca ggcgacacct ggtgttcttc aataccacgc cagccgtatg tggcccggtc
    15361 atcggcgtca ctgccgccat ggaagaggcg cgggccaacg gcgcggaaat tgatgacggt
    15421 accattaacg gcatcaaagt cggtctgatg ggaccattgg caggagttgg cgatccactg
    15481 gtctggggaa cgctgcgccc gattaccacc gcgctcggcg catctctggc actttcgggc
    15541 aacattctcg gcccgctgct gttcttcttt attttcaatg cggtgcgtct ggcgatgaag
    15601 tggtatggcc tacagctcgg ctttcgcaaa ggggtgaata tcgtcagcga tatgggcggg
    15661 aatgtgctgc aaaaactcac cgaaggcgcg tcgattctcg gactgtttgt gatgggcgtg
    15721 ctggtcacca aatggacgtc aatcaacgta ccgttggtgg tttcacaaac gcatgccgcc
    15781 gatggctcca ccgtcaccat gaccgtgcag aacattctcg accaactttg ccctggtttg
    15841 ctggcgctcg gtctgacgct gcttatggtt cgtctgctca acaaaaaaat taacccggta
    15901 tggctgattt tcgccctgtt tggcttaggg attatcggta atgcgctggg cttcctgtcc
    15961 agattcttcg ccccggcatg actgccgggg ccatcgctca acatgaggtg gtttatgaaa
    16021 acaacagctc tgcgtcttta tggtaaacgt gatttacgcc tggaaacctt tgaccttcct
    16081 gaaatgcagg aggatgaaat cctcgcgacg gtggtcactg acagcctgtg cctctcttcc
    16141 tggaaagagg ccaatctggg tgaaaaccat aaaaaagtac ccgacgatgt ggcgaccaac
    16201 cccatcatca tcggccacga gttttgcggc gatattctgg ccgtgggtaa aaagtggcag
    16261 cacaaattcc agccgggtca gcgttatgtg attcaggcca acctgcaact ccccgaccgc
    16321 ccggactgcc ccggctactc cttcccgtgg gtgggcggcg aagccacgca tgtggttatt
    16381 cccaacgagg tcatggaaca agattgcctg ctggcatacg acggcgaaac ctattttgaa
    16441 ggctcactgg ttgaaccgct ttcctgcgtg attggcgcgt tcaacgccaa ctatcatctt
    16501 caggaaggta gttataacca cacgatgggg attcgcccgc aagggcgcat gctgatcctc
    16561 ggcggcaccg gaccaatggg actgttggcg attgattatg cgctacatgg acccgttaac
    16621 ccgtcgcagc tcgtcattac cgataccgac aacgataaat tgagttatgc gcgcaagcac
    16681 tatccatcag aaccgcaaac actgattcat tatctcaatg ccgccgatgc agcatttgat
    16741 acgctaatgg cgctgagtgg cggtcacggc ttcgatgata ttttcgtctt tgtgcctaat
    16801 gaaggactgg tgactctcgc ctcttccttg ctggcgacag atggttgcct gaatttcttc
    16861 gccggaccgc aggataaaca tttcagcgcg ccaattaatt tctacgatgt gcattatgca
    16921 tttacccact acgtgggcac gtcaggcggc aataccgacg acatgcgcgc ggcggtcaaa
    16981 ctgattgaag agaaaaaagt gcaggccgca aaagtggtaa cacatattct tgggctgaat
    17041 gccgcgggcg aaaccacgct tgaattgcct gccgtcggcg gcggcaaaaa gctggtgtat
    17101 accgggaaat acctgccgct gacgtcactc acgcagattc aggatcaagc actggcggcg
    17161 attctggcgc gtcatcaggg gatctggtcc ggtgaggcgg agcaatatct gctcactcat
    17221 gcagaggcaa tttcccatga ttaatcgcgc tacttaactc tgcatgtcgc tggctggtcg
    17281 ccgcggcaac ttcgcgacct gatgtgcggc tgattgctga agcggcccaa tgtgcacgag
    17341 aaggataaaa aaacatcagc gccttaaggg gcgctcaaat tggtggcaaa gtacacattg
    17401 tttatgccgg atgcggaata aagccttatt cggcctacat aatctcgaaa attcaatata
    17461 ttgcagttat ctggtaggcc tggtaagcgt agcgcatcag gcaatgctgt gtttgtcatc
    17521 agtctcagct cccggtgcaa tacgtgacat cgtgagccat gtcagtaagt ggttaaattc
    17581 gcagtggtag catgccttcc gtgatttctt actaaccgga gaagtaatgg aactgctttt
    17641 attgagtaac tcgacgctgc cgggtaaagc ctggctggaa catgcactgc cgctaattgc
    17701 tgaacagttg cagggtcgcc gctcagcggt gtttatccct ttcgctggcg taacgcagac
    17761 ctgggatgat tacacagcga aaacggctgc ggttctcgct ccgctgggtg tttctgtcac
    17821 cggtattcat agcgttgtcg atcccgttgc cgcgattgaa aatgctgaga tcgtgattgt
    17881 cggcggcggg aatactttcc agttgctgaa acagtgccgc gagcgcgggc tgctggcacc
    17941 aattactgac gtggttaaac gtggtgcgct gtatattggc tggagcgcag gcgctaacct
    18001 tgcttgccca accattcgta ccaccaacga tatgccgatt gtcgatccgc aaggtttcga
    18061 tgcgctaaat ctgttcccgt tgcaaatcaa cccgcacttc accaacgcgc tgccggaagg
    18121 ccataaaggt gaaacccgtg agcagcgtat tcgcgaactg ctggtcgtcg cgccagaact
    18181 gacgattatt ggtctaccgg aagataactg gatcacagtg agtaaaggtc acgctacgct
    18241 gggtggcccg aacaccacct atgtgtttaa ggccggtgaa gaagcggttc cgctggaagc
    18301 tggtcaccgt ttttaagtga attgccggat gcatgatccg gcatcttgtt catagtgcct
    18361 gatgcgacgc ttgacgcgtc ttatcaggcc tacaggattc acaatattaa tactcgtccc
    18421 gtccttcatc ttcatccgac tgttccagca cactgtaagc caccgaacaa aacagcgagt
    18481 tcaggcgctg catatctccc agtaagccta aatgtagcga actggtttca atgctctgca
    18541 cgttttgctg atgcaggcga tcgacgtggg cgtgggaata gcggcgatta agaatgcgaa
    18601 agcgatgctt actacggcgc aaacgacgag cgctggtgac atcgccagag aagaacaccg
    18661 acattgccag ctttaaatta ctgagcaatt gctcatagag cgcatccagt tccttcaacc
    18721 catcaagcga aaatgcccgc cgtgctgcca gtgatttgtc agcaatttcg ctgcccatgc
    18781 gctcgacgat atcggaggcc tgttcaaggt tgagcgacat ttcaataatc tccgcccagc
    18841 ggcgcgactc ttcctccgcc agctcttctt ttggcatccg cgccagatac agcttaatgg
    18901 cggtgtagag aacgttgata tcatctgcca gcttacgcag ctctttctcc tgccgtggct
    18961 caccgtgcat cactttattc aacccttcca tcatctgttc catggcgtcg ccaatgcgca
    19021 gggtttcgcg cgcggcgttc gccagagcaa gcgtgggcgt atccagcgcg ctgacatcca
    19081 gatgtttagg ccgtagctgg gtatccagtt ccggttcatc gcgaataatc gttttgcaaa
    19141 accgtgccat cgggtcaaca aatggcagca tgaccaggca acgtacaagg ttgtagaaga
    19201 cgtggaaata gatcaccagt tccgcttttg gcaatgacag cttccccatt gtctctgcca
    19261 gcaaatggac aaacggcagg ataatcaggc tacccaccag cttaaacagc agactaccca
    19321 gcgcgacacg gcgggctgcg gcattggcgg cactgttgtt gagcatcgcc agcaggccgg
    19381 aaccgaggtt agcaccaatc accagacaga gcgccacggg gaaggagata atgcctgcgg
    19441 cggtcagagc cgcggtcagc agtacagcag caaggctgga gtagctgata atggcgaaca
    19501 tcgcgccaat cagcgcatcc agcagaatat cgccggtcag cgaggcaaag atcacctgaa
    19561 cgccgtttgc ctgggtgatc ggcgttacgg cctgcacaat caactccagc gccagcaaaa
    19621 tcagcccaag accaataccg acgcggccca gttgcccggc gcgtgactgt ttgcgtccga
    19681 ggaaaaaaat cacgccgata aaaataagta acggtgacag ccaggataag tcgaaggtga
    19741 gaatacgcgc cattagcgcc gtcccgacat ctgcccccag cacaatgacc agagccggtg
    19801 cgagggctac cagatcctga gcgacgaacg aggtcaccag catggtggtg gcattactgc
    19861 tctgtaccag tgcggtaacg ccgatccccg cgcaaaaggc gagcggcttt ttttcgacgc
    19921 tccggctaag gacagtacgc aaacgcgcgc cgaagacgcg cattacgccg gttcgaacaa
    19981 tatgagtccc ccagaccagc agggcgacgg cagaaagcag gtgaagcagc gttaacacga
    20041 gttcaggttc tccttatcgt tatatgttcc tgaagcaatt gaatgaccaa aggaccggaa
    20101 acacgctgac tggcatcttt actgtgcctt ttgacattcg tttttccggc taagattatt
    20161 ccagcctgat tccagtataa gtgtttcata ttaataaaga gacagggcac tcattgagcg
    20221 ccctgtttgt tgtaaggaaa agtgacagat ttgtgaatca gtccgcgtca taccccagat
    20281 tcggtgccag ccagcgctca acatctgaga cgctcatacc tttacggcgg gcatagtctt
    20341 caacctgatc gcgctgaatt tgcgccacgg cgtagtactt gctgtccggg tggctgaaat
    20401 accaacccga aaccgatgca ccgggccaca tggcgaaaga ttctgtgagt ttcatgccgg
    20461 tatgtttttc cacttccagc agctcccaga tggtggcttt ttccgtatgt tccgggcagg
    20521 ccgggtagcc cggtgccgga cggatgccct ggtagttttc gcggatcagt tcttcgttgc
    20581 tgaggttctc gttcggcgca tagccccagt agactttacg cacacgctca tggagatact
    20641 ccgcaaaggc ttcggctaaa cggtcggcaa gcgctttcac catgattttg ttgtaatcat
    20701 cgtgctgcgc ttcaaaggca tcagccagtg cgtcctcttc cagcccgcca gtcacggcaa
    20761 atgcgccgat gtaatctgct ttaccagaaa gcttcggcgc aacgaagtca gcgagacagt
    20821 agttagcgaa tcccgttttt tcggtctgtt gacgcagatg gtggctgaca ttgatcacat
    20881 gggtgcgcgt ttcgtcacgg tagatttcaa tgtcatcgcc cacacggttt gccgggaaca
    20941 ggcccaccac gccacgccac gcggattcag cgttttctcg gcgcttaatt tatccagcat
    21001 gtcgttggcg tctttaaaca gccgctgcgc ctcaacgccc accacttcat cttccagaat
    21061 gcgcggatac ttcccggcca gcgaccaggt cataaagaac ggtgtccagt cgatgcaatt
    21121 acgcagagtt tcgatgctgg cttcaacttc ctgcacgccg agacggtgcg ccaccggcgg
    21181 cgtgtaagcc tgccagtcaa aagcgaagtc gttatcgcgc gccgcttcca gcgtgaccgg
    21241 tggtgtgcgc ggtttcttgc gcccgtgctg aatacgtacg gtttcgtact ccttgcgggt
    21301 acgagcgaca aaatcatcgc gctgagtatc ggaaagcagc gccgccacca caccaacggt
    21361 gcgcgaggca ttctgcacat acaccgtcgg gccgctgtag ttctgctcaa ttttcaccgc
    21421 cgtgtgcgct tttgaggtgg tcgcgccacc gatcagtaac ggaatggtga agccctgacg
    21481 ctccatctct ttcgccacgt taaccatctc gtccagcgac ggcgtgataa gccccgaaag
    21541 gccaatcaaa tcagcattca cttctttagc agtacggaga attttttccg caggcaccat
    21601 cacgccgaga tcgacaattt cgtagttgtt acattgcagc accacgccaa cgatattttt
    21661 accgatatcg tggacgtcgc ccttcacggt ggcgatcacc atcttgccgt tggttttgcc
    21721 ctgctctttg ctggcttcaa taaacggttc gagatacgcc accgcctgtt tcatgacgcg
    21781 cgccgatttg accacctgtg gcaggaacat tttgccttcg ccaaacagat cgccgaccac
    21841 gttcatgccg tccatcaacg ggccttcaat cacttcaatc gggcgcgtag cctgctggcg
    21901 ggcttcttcg gtatcctgct cgataaactc ggtaatgcct ttgaccagcg agtattccag
    21961 acgtttattc acttcccacg agcgccactc cgcctgctgg gcgttatcgg tgtcgtcggt
    22021 tttgctgccg cgatatttct cggcaagctc cagtaaacgc tcagtgccat cgtcacgacg
    22081 attaagaatc acatcttcca ccgcgtcgcg cagttcagcg ggtaggtcgt cgtaaatcgc
    22141 cagttgcccc gcgttgacga tccccatatc catgccattg cgaatagcgt agtagaggaa
    22201 cactgcgtga atggcttcgc gcaccggatc gttgccacgg aatgagaaag aaacgttaga
    22261 tacgccgccg gaaatcagcg cgtgcggcag ttcgcgtttg atgtcttcac acgcgccgat
    22321 aaagtcctgc gcgtagttgt tgtgctcttc aataccggtg gcgaccgcga agatgttcgg
    22381 gtcgaagatg atatcttctg gcgggaagcc aacctcttcg gtgaggattt tgtacgcccg
    22441 acggcaaatc tcgattttcc gtgcgcgagt atcggcctgt ccctgttcat caaaggccat
    22501 caccaccact gccgcaccgt agcgacgcaa caatttcgcg tgatggataa aggcgtcgac
    22561 gccctctttc atcgagattg agttaacaat gcctttgccc tgaatacact tcagcccttt
    22621 ttcgataacg tcccattttg aggagtcgat cataatcggc acgcgagcga tatccggttc
    22681 accggcaatc agattgagaa aacgcaccat cgccgcttcg gcatcgagca tcccttcatc
    22741 catgttgata tcgataatct gcgcgccgtt ttccacctgc tgacgcgcca catcctgcgc
    22801 ctcgctgtat ttctcttctt tgatcaggcg cttgaactta gcagagccgg tgacgttggt
    22861 gcgttcaccc acgttcacaa acaggctatc gtcgccaatg ttcagcggct ccaggccaga
    22921 caaacggcag gctacgggaa tttccggcag tttgcgcggc gctaatcctt ctactgcacg
    22981 actcatcgct gcaatatgtt gcggcgtggt cccgcagcaa ccaccgacga tattgagaaa
    23041 gcccgcttgc gcccattcac gtatctgttt tgccatcgtg tcggcgtcga gatcgtattc
    23101 accaaaggcg ttaggcagcc cggcgttcgg gtgggcggtg acgtagcatt ccgcaatccg
    23161 tgatagttcc tgcacgtact ggcgcagttc atcgggcccc agcgcacagt tcaggccaaa
    23221 ggttagcgct tcggcgtggc gcaatgagtt gtaaaatgct tcggtggtct gcccggagag
    23281 cgtgcgcccg gaggcgtcgg tgatggtgcc ggagatcata atcggcagct caacgcccag
    23341 cgcttcaaac tccgttttca ccgcaaaaac cgccgctttg gcgttaaggg tgtcgaaaac
    23401 ggtttcaatc aggatcagat ccgcaccacc ttccaccagc gctttggtgg attcgcgata
    23461 ggccgccacc agctggtcaa aagtgatgtt gcggaatgcc ggatcgttga cgtccggaga
    23521 aatagacgcc gtgcggttgg ttgggccgag aacaccggca acgtagcgcg gtttctccgg
    23581 cgtgcgcgcg gtccactcgt cagcacaggc gcgcgccagt ttcgccgccg caaagttgat
    23641 ttccgccgac agggattcca tctggtaatc cgccatcgca atggtcgtgg agttgaaggt
    23701 gttggtttcg atgatatccg cgcccgcttc aaagtaggcg ttgtggatag cggcgatcac
    23761 ttccggtttg ctgagcacca gcaggtcgtt gttgcctttg agatcgcatg gccagtcggc
    23821 aaagcgttca ccacgaaaat cggcttcgtt cagtcgataa ctctggatca tggtgcccat
    23881 accgccgtcc agcaccagaa tacgttcatt taactgcgca cgcagttgtt ccactttgct
    23941 gctcacactt gctcccgaca cgctcaaccc agatttaata aaaattcaac aaaccatact
    24001 ggcataaacg catctgtggt aaaagcgacc accacgcaac atgagatttg ttcaacatta
    24061 actcatcgga tcagttcagc aactattgca ttagctaaca ataaaaatga aaatgattcc
    24121 cacgatacag aaaaaggaga ctgtcatggt cgcacccatt cccgcgaaac gcggcagaaa
    24181 acccgccgtt gccaccgcac cagcgactgg acaggttcag tctttaacgc gtggcctgaa
    24241 attactggag tggattgccg aatccaatgg cagtgtggca ctcacggaac tggcgcaaca
    24301 agccgggtta cccaattcca cgacccaccg cctgctaacc acaatgcaac agcagggttt
    24361 cgtgcgtcag gttggcgaac tgggacactg ggcaatcggc gcacatgcct ttatggtcgg
    24421 cagcagcttt ctccagagtc gtaatttgtt agcaattgtt caccctatcc tgcgcaatct
    24481 aatggaagag tctggcgaaa cggtcaatat ggcggtgctt gatcaaagcg atcacgaagc
    24541 gattattatc gaccaggtac agtgtacgca tctgatgcga atgtccgcgc ctatcggcgg
    24601 taaattgccg atgcacgctt ccggtgcagg taaagccttt ttagcccaac tgagcgaaga
    24661 acaggtgacg aagctgctgc accgcaaagg gttacatgcc tatacccacg caacgctggt
    24721 gtctcctgtg catttaaaag aagatctcgc ccaaacgcgc aaacggggtt attcatttga
    24781 cgatgaggaa catgcgctgg ggctacgttg ccttgcagcg tgtattttcg atgagcaccg
    24841 tgaaccgttt gccgcaattt ctatttccgg accgatttca cgtattaccg atgaccgcgt
    24901 gaccgagttt ggcgcaatgg tgattaaagc ggcgaaggaa gtgacactgg cgtacggtgg
    24961 aatgcgctga ctttttctgg cgggcagagg caatattctg cccatcatac
//
LOCUS       DADKRT010000045        24875 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.045, whole genome shotgun sequence.
ACCESSION   DADKRT010000045 DADKRT010000000
VERSION     DADKRT010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24875
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.045"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..337)
                     /locus_tag="JQ356_001557"
     CDS             complement(<1..337)
                     /locus_tag="JQ356_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621693.1"
                     /translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV
                     AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE
                     WYNTRFVPAA"
     gene            complement(453..1004)
                     /gene="maa"
                     /locus_tag="JQ356_001558"
     CDS             complement(453..1004)
                     /gene="maa"
                     /locus_tag="JQ356_001558"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HAY4621694.1"
                     /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT
                     LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML
                     APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA
                     VVTKGVPDNVVVGGNPARIIKKL"
     gene            complement(1176..1394)
                     /gene="hha"
                     /locus_tag="JQ356_001559"
     CDS             complement(1176..1394)
                     /gene="hha"
                     /locus_tag="JQ356_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY4621695.1"
                     /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            complement(1420..1794)
                     /gene="tomB"
                     /locus_tag="JQ356_001560"
     CDS             complement(1420..1794)
                     /gene="tomB"
                     /locus_tag="JQ356_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
                     /protein_id="HAY4621696.1"
                     /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNYGWVNDPTSAI
                     NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK
                     SGNRLFRCFVNATKENPASLSC"
     gene            complement(2340..5489)
                     /locus_tag="JQ356_001561"
     CDS             complement(2340..5489)
                     /locus_tag="JQ356_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HAY4621697.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
                     IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
                     KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
                     VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG
                     YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
                     RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKNEDIEHSHTVDHH"
     gene            complement(5512..6705)
                     /gene="acrA"
                     /locus_tag="JQ356_001562"
     CDS             complement(5512..6705)
                     /gene="acrA"
                     /locus_tag="JQ356_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HAY4621698.1"
                     /translation="MNKNRGFTPLAVVLMLSGSLALTGCDNKQAQQGGQQMPAVGVVT
                     VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ
                     ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA
                     KAAVETARINLAYTKVTAPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
                     RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
                     RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
                     EQSKS"
     gene            6847..7494
                     /gene="acrR"
                     /locus_tag="JQ356_001563"
     CDS             6847..7494
                     /gene="acrR"
                     /locus_tag="JQ356_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HAY4621699.1"
                     /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
                     RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
                     EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
                     RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
     gene            7622..10984
                     /gene="mscK"
                     /locus_tag="JQ356_001564"
     CDS             7622..10984
                     /gene="mscK"
                     /locus_tag="JQ356_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HAY4621700.1"
                     /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK
                     ADLQAQLDSLNKQKDLSAQDKLELQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM
                     RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS
                     LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ
                     RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD
                     EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE
                     QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF
                     VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
                     SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWEKAWPAVFIAFL
                     AGLPLLLIVGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI
                     ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS
                     HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES
                     WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLSGRWIETVYLVIIWNLLYQ
                     TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM
                     FALFGVMFWAIWSDLITVFSYIDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA
                     WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW
                     LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT
                     DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP
                     RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF
                     NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG"
     gene            complement(11196..11357)
                     /gene="rsmS"
                     /locus_tag="JQ356_001565"
     CDS             complement(11196..11357)
                     /gene="rsmS"
                     /locus_tag="JQ356_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HAY4621701.1"
                     /translation="MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKK
                     LTRDDEAEK"
     gene            complement(11371..11898)
                     /gene="priC"
                     /locus_tag="JQ356_001566"
     CDS             complement(11371..11898)
                     /gene="priC"
                     /locus_tag="JQ356_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N''"
                     /protein_id="HAY4621702.1"
                     /translation="MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRTT
                     TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP
                     PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
                     HALEKIENRLARLTR"
     gene            11968..12345
                     /locus_tag="JQ356_001567"
     CDS             11968..12345
                     /locus_tag="JQ356_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HAY4621703.1"
                     /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP
                     RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL
                     VILACLLFYMWRIPVIDEKQEKH"
     gene            12498..13049
                     /gene="apt"
                     /locus_tag="JQ356_001568"
     CDS             12498..13049
                     /gene="apt"
                     /locus_tag="JQ356_001568"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HAY4621704.1"
                     /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL
                     EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
                     LGGEQRLEKQGITSYSLVPFPGH"
     gene            13178..15049
                     /gene="dnaX"
                     /locus_tag="JQ356_001569"
     CDS             13178..15049
                     /gene="dnaX"
                     /locus_tag="JQ356_001569"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HAY4621705.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
                     SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI
                     EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
                     GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ
                     PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVPSALEKAP
                     AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAARVS
                     QLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSTLKGSTVEL
                     TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI"
     gene            15102..15431
                     /locus_tag="JQ356_001570"
     CDS             15102..15431
                     /locus_tag="JQ356_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HAY4621706.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            15431..16036
                     /gene="recR"
                     /locus_tag="JQ356_001571"
     CDS             15431..16036
                     /gene="recR"
                     /locus_tag="JQ356_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HAY4621707.1"
                     /translation="MQTSPLLTQLMEALRCLSGVGPKSAQRMAFTLLQRDRSGGMRLA
                     QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
                     GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
                     CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
     gene            16146..18020
                     /gene="htpG"
                     /locus_tag="JQ356_001572"
     CDS             16146..18020
                     /gene="htpG"
                     /locus_tag="JQ356_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HAY4621708.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
                     KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
                     EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
                     SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
                     QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
                     TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
                     IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
                     "
     gene            18201..18845
                     /gene="adk"
                     /locus_tag="JQ356_001573"
     CDS             18201..18845
                     /gene="adk"
                     /locus_tag="JQ356_001573"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HAY4621709.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN
                     VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG"
     gene            18977..19939
                     /gene="hemH"
                     /locus_tag="JQ356_001574"
     CDS             18977..19939
                     /gene="hemH"
                     /locus_tag="JQ356_001574"
                     /EC_number="4.99.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HAY4621710.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
                     WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSY
                     GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
                     DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL
                     ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET
                     LEEIAEQNREVFLGAGGKKYEYIPALNATPEYIEMMANLVAAYR"
     gene            complement(19936..20895)
                     /gene="aes"
                     /locus_tag="JQ356_001575"
     CDS             complement(19936..20895)
                     /gene="aes"
                     /locus_tag="JQ356_001575"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HAY4621711.1"
                     /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPSWPATGTIAEQRQYY
                     TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
                     HDRIMRLLASYSQCTVIGIDYPLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
                     FAGDSAGAMLALASALWLRDKQIDCGKIAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ
                     QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA
                     AHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL"
     gene            21047..22351
                     /locus_tag="JQ356_001576"
     CDS             21047..22351
                     /locus_tag="JQ356_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HAY4621712.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
                     DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
                     YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
                     WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            complement(22484..24160)
                     /locus_tag="JQ356_001577"
     CDS             complement(22484..24160)
                     /locus_tag="JQ356_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HAY4621713.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL
                     GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
                     KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
                     TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
                     IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
     gene            complement(24398..>24875)
                     /locus_tag="JQ356_001578"
     CDS             complement(24398..>24875)
                     /locus_tag="JQ356_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4621714.1"
                     /translation="YYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGR
                     KYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGM
                     VSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD"
BASE COUNT         6215 a         6483 c         6390 g         5787 t
ORIGIN      
        1 gcgcggcagg tacaaagcgc gtgttgtacc attcgccgtt atagcaaacg cggaaatcca
       61 gcacgtcgat atcttcatag cggtagcgtg ggtagacatc gaaaaagaag aaaccattaa
      121 gcaggataaa taatacaacc agtagccaga cagagcctga cagcgtttcg gactgcaaca
      181 tcaccgccag ggtggcaaaa aaagcaacgt acataccgat aaacagcccc ggatgtttac
      241 ggataaaact gatactaaag cggggtttgt tgtcgcgttt ttcgcgggta ttcagagact
      301 caatcgtttc ggtcagcagg cgttgtattt cggtcatcgt ttgccttcgt ggtatctgca
      361 actttccagg gaacacccta ttttaacgtg ggaatagtag aggggaagta acagatctac
      421 cacaattttg cataacagtt gcgaaaaacc gattacaatt ttttaattat tctggctgga
      481 ttaccgccca cgacaacgtt gtccgggaca ccttttgtga caactgcacc tgaagctacc
      541 acgacgttat caccaatggt cacaccaggg ttaatgaccg cgcgtccgcc aatccagacg
      601 ttattaccga tggtgacggg tttccccagt tcagcaccgc tattacgtgc tacagggtcg
      661 atgggatgtg ttgccgtgta gatatgaacg cctggtgcca acatacagtt atcaccgatg
      721 cgaatagggc agacatcaag catcacgcaa tcgaagttgg cgaaaaaatt attgccgaga
      781 aaaatgttat agccataatc acagcgaaac gttggctcaa tataagcctc tgtcacctga
      841 ccgaataaat cagcgagaat ttgctggcgt aatgtgtgct cttccgccag ggaatgattg
      901 tatcggtgaa taagctgacg agcgcgcagg cgatcgcgag ataacgtctc atctgccgag
      961 cgatacaact caccagcaat catcttttct ttttctgtgc tcattactga cctccggttg
     1021 ctgaaaatgc ggcaacacag taagacgaaa agtcagtgaa cagaacgttc ccattacatc
     1081 tgtgtgataa agatcacata gggtatgtct tcatggtgaa aaagtataaa attcttaata
     1141 aacagccggt tatagctccg aaagcgaatt atttattagc gaataaattt ccatactgag
     1201 gaagggatct tgtcgtatag tttattcatg gtcaattcgg cgaggcggtg atctgcggct
     1261 gagtaaaata ccgccagttc attatctgat aattcgtatt tatttttctc gataacacgc
     1321 tccagcgtgt caattgtctg gcaacgacgt aaacgcatta aataatcggt tttcgttaaa
     1381 ggtttttcgg acatacttct acccatggtt gtaataattc taacaagata aactcgcagg
     1441 attctctttc gtcgcattga caaaacaacg gaatagtcga ttacctgact tccgccattt
     1501 ctgaagatcc tgcatattaa taccataact actgaacaac ataaaggtgt catccagata
     1561 ttcgtcgatc tgctcaatga gcttattgtc ttcattatac ttaattttgt aattaagtgc
     1621 gaaggtcgca atatgctcaa tcagttcatt caactggagg ttgatcgccg aggttgggtc
     1681 gttaacccag ccataattgc tttcttcaag gtttgcaagg cagtcatgat acagggtttc
     1741 acagagaaac ttaagctgtg cgatatcatg tcttttgggt gagtattcat ccataacgcg
     1801 tccccttctt agcggttgaa ctaacggaca cctttcggga tggaaaaaac ttactgacct
     1861 ggacttgccc tctcgtttgt tagcttaact ataagccact ctttgcaggt attcatcgca
     1921 ttattacgaa aaattacaat taggaaggaa tcgggacagg actcactttt tcatactagc
     1981 actaacccgc agcaggtaaa agcagtttgc tcgaactgtt cataacattt caggattatc
     2041 gccagatgaa attggtgaca ctaataccag gattgctctg aatatgacgt aataaccgag
     2101 gaatgaataa agaattaccg caaataatta agaatagcct ctaaatgatt atggattatt
     2161 aaatctatta gcgctactta atataaatta actaacaatc agtatttttt atgaatttta
     2221 tccgtggtta atactggttt tcgtatgaga tcctgagttg gtggttcaat tactccttaa
     2281 tgttcgtagg ttatgcataa aaaaggccgc ttgcgcggcc ttagtgatta cacgttgtat
     2341 caatgatgat cgacagtatg gctgtgctcg atatcttcat tcttgcggct aaagcggcgg
     2401 cgaaccacca caaagaatac cggaacgaag aagattgcca gtaccgttgc ggtcaccatc
     2461 ccgcccatta caccggtacc tactgcgttc tgcgcgccgg aaccagcacc agtactgata
     2521 accagcggca taacgccgag gataaacgcc agcgaggtca tcaggatcgg acgtaaacgc
     2581 atccgcactg catcaagcgt cgcttcaatc agacctttac cttctttatc catcaagtct
     2641 ttggcgaatt cgacgataag tatcgcgttc ttcgccgaca acccaatggt tgtgagcagg
     2701 cctacttgga agtaaacgtc attggtcagg ccacggaagg tggcagccag caacgcaccg
     2761 ataaccccca gcggaacgac cagcataacg gagaacggaa tcgaccagct ctcgtacagc
     2821 gccgctagac acaggaatac gacaatcaac gaaatcgcgt acagtgaagg tgcctggttg
     2881 ccggagaggc gttcctgata ggacatcccc gtccagtcat agccaacacc ggtaggcagt
     2941 ttgctcgcca gttgttccat tagctccatt gcttcaccgg tacttttacc cggtgccgcc
     3001 tggcctaaga tttccatgga tggcaggcca ttgtaacgtt ccagacgcgg cgaaccgtac
     3061 tcccaacgag aagaggagaa tgccgagaac ggcaccatct gaccatcagc agcacgaaca
     3121 taccagtcgc cgatatcatc cggcagcata cggtatttcg cttctgacat gacgtaaact
     3181 ttcttcacac gaccgcggtc gataaagtcg ttcacatagc taccgcccca tgcagcgccc
     3241 agagtggtgt taatgtcgtt gatagaaaca cccagcgcct gcgctttttc ctggtcgata
     3301 tcaatcttaa actgcggggt atcttccaga ccgtttggac gtacgctggt caacatatca
     3361 ggatgctttg ctgcttctgc aagcagctgg ttacgcgcct gagtcagttt ttcgtgacca
     3421 aggccagcct ggtcaatcag ctcaaagtca aagccggttg cagtacccag ttccacgatt
     3481 gcgggcaggt taaaggcgaa aaccatcgca tctttgattt gcgagaaagc gcgtgttgca
     3541 cgcatggtaa tcgcttcaac tttgttttct tcgcccggac gatcggccca gtccttcaag
     3601 gaaacgaacg caataccggt attctgacca cgtcccgcaa agccgaagcc gttaacggcg
     3661 aacaccgact caacgttgtt cttttctttg gtcagatagt aatgcgttac ctcattgagc
     3721 actttctgcg tacgttcctg cgttgcacct gctggcagct gaaccatggt cataaatacg
     3781 ccctggtcct catctggcaa gaaggagctt ggcagacgca cgaacagata ggccatgccg
     3841 accacgatga tcagatacag caccaggtaa cgccccgtac tgcgcagaat accgcctacg
     3901 ctgtcggtgt agtggtgcgt gctcttctcg aacatgcggt taaaccagcc gaagaagcct
     3961 tttttacctt ccccgtgatc gcctttggca atcggtttca gcatggtggc acaaagagcc
     4021 ggagtcagga tcaacgctac cagtaccgac agcgccattg ctgaaacaat ggtaatagag
     4081 aactgacgat agatagcacc agtagaaccg ccaaagaagg ccatcggtac gaataccgct
     4141 gacagtacca tcgcgatacc gaccagagcg ccctgaatct gccccatcga cttacgggta
     4201 gcttcttttg gcggcaaacc ttcttccgcc ataacacgct ccacgttttc taccacaacg
     4261 atagcgtcat ccaccaacaa gccgatggcg agcaccatcc cgaacattgt tagcgtgttt
     4321 atcgagaagc caaaggcggc aaggacggca aaggtcccga gcaataccac cggtacggca
     4381 atggtcggaa tcaacgtcgc gcggaagttc tgcaggaaca gatacataac caggaacacg
     4441 aggatgatcg cttcgaccag cgttttaacc acttcgtgaa tagagatttt cacgaacggc
     4501 gtggtgtcgt acgggtaaac aattttcaga cccgacggga agaacggttc catcttcgcc
     4561 agttcagcac ggattgccgc agcggtatcc agcgcatttg caccggtcgc cagcttgatc
     4621 cccagaccgg aagccggttg gccgttaaac tctgcgatga tgtcgtagtt ctcaccaccc
     4681 agctcaatct tcgccacatc acgcagcagg acgcgggaac catcctgatt cactttcagc
     4741 aggattttgc cgaactcttc agtagaggtc agacgcgtct gagcaataat agaggcgtta
     4801 agctgttggc ctttcaccgg cggcgtacca ccgagctgac ccgccgcaac ctgggcgttc
     4861 tgcgctttga tggcggtaat gacatcaacc ggcgttagct ggaatttgtt cagctcattc
     4921 gggttcatcc agatacgcat cgcgtactgt gaaccgaaca actgaacatc acccacgccc
     4981 gacgtacggc tgatggcatc tttcatattc gccgctacgt agtcagagat atcctcctgc
     5041 gtcatggtgc catcggtgtt gataacgccg acaaccatca ggaagctgct ggatgatttc
     5101 tcaacgctca ccccttgctg ctgaacttct tgcggcagca acggcatcgc cagctgcagt
     5161 ttgttctgca cctgaacctg cgcgatatcc gcatcagtac cagactcaaa ggtcagggtg
     5221 atctgcacgg tccccgtgga gtcactgtta gaggacatgt acatcaggtt atcgataccg
     5281 ttcatattct gttcgataac ctgtgtcacc gtgtcctgca ctgttttcgc atcagcgccg
     5341 gggtaggagg cggagatcgt tactgccggc ggtgcaatcg taggatattg cgccaccggc
     5401 agtttgagga tcgccagccc ccctgccaac atgatgataa tggcgatcac ccacgcaaaa
     5461 atcgggcgat cgataaagaa attaggcatg tcttaacggc tcctgtttaa gttaagactt
     5521 ggactgttca ggctgagcac cgcttgcggc ttgctggtta ttatcagcgg taacttcttg
     5581 tgcttttacc tggacaccag gacgcacttt ctgcagccca cttattacta cgcgatcgcc
     5641 tgctttcaga ccttctgtca ccagccactt atcgccaata gcctggcttg caacgatcgg
     5701 acgggtttcc actttgtcat ccgcgccaac taccagtacg gtggcatcac cacgcggcgt
     5761 acgggttacg ccctgttgcg ggactaaaat agcgtttgga ttaagccctt cttccagacg
     5821 tgcgcgcacg aacatacccg gcagcagagt gtgatccggg ttcgggaaga tagcgcgtag
     5881 ggtgatagac ccagtggtct gatcaacggt aacgtcagag aattccagcg taccgtcctg
     5941 cgggaactta atgccgtcac tggtgatcag cgacactttg gctttgccgt tctcttgttt
     6001 cagcgtgcca ttcgccagtt cctgtttcag gcgcaggaag tcgttgctgg actgggtcac
     6061 atcaacgtag atcggatcaa gttgctgcac ggttgccagc gcagtcgcct gaccgttctg
     6121 taccaatgcg ccttccgtca cgttcgactt accaatgcga ccgctaatcg gagcggtgac
     6181 tttggtgtaa gccagattga tccgcgcagt ttcaacggca gctttcgccg cagttaccgc
     6241 agcattcgcc tgttgcgcat cagccagagc ctgatcgtac tcttgcttac tgatgtactg
     6301 agtaccgagc agtttctgat aacgattcac cgtcaattgc gcgatattgg ctgcagcctg
     6361 ggctttcgcc agatcacctt tcgcactgtc gtatgtcgcc tgataggtcg caggatcaat
     6421 ctgatagaga gagacaccag cttcgatgtc gctaccttct ttgaaattac gcttcaggat
     6481 aatcccgcta acttgaggac gaacttctgc gatccggtag gcactggtgc gacccggaag
     6541 ctcggttgtg atctgcagag gttcagtttt gactgttact acgccaacgg cgggcatctg
     6601 ctggccacct tgttgggcct gtttgttgtc acatcctgtt agggctaagc tgcctgagag
     6661 catcagaacg accgccagag gcgtaaaccc tctgtttttg ttcatatgta aacctcgagt
     6721 gtccgatttc aaattggtca atggtcaaaa gttaataaac ccattgctgc gtttatatta
     6781 tcgtcgtgct atggtacata cattcacaaa tgtatgtaaa tctaacgcct gtaaattcac
     6841 gaacatatgg cacgaaaaac caaacaagaa gcgcaagaaa cgcgccaaca catcctcgat
     6901 gtggctctac gtcttttctc acagcagggg gtatcatcca cctcgctggg tgagattgca
     6961 aaagcagctg gcgttacgcg cggtgcaatc tactggcatt ttaaagacaa gtcggatttg
     7021 ttcagtgaga tctgggaact gtcagaatcc aatattggtg aactagagct tgagtatcag
     7081 gcaaaattcc ctggcgatcc actctcagta ttaagagaga tattaattca tgttcttgaa
     7141 tccacggtga cagaagaacg acgtcgatta ttgatggaga ttatattcca caaatgcgaa
     7201 tttgtcggag aaatggctgt tgtgcaacag gcacaacgta atctctgtct ggaaagttat
     7261 gaccgtatag aacaaacgtt aaaacattgt attgaagcga aaatgttgcc tgcggattta
     7321 atgacgcgtc gggcagcaat tattatgcgc ggctatattt ccggcctgat ggaaaactgg
     7381 ctctttgccc cgcaatcttt tgatcttaaa aaagaagccc gcgattacgt cgccatctta
     7441 ctggagatgt atctcctgtg ccccacgctt cgtaatcctg ccactaacga ataaccctga
     7501 atctgactcc aggatttttc ctggacattt tcgtcgttgc tattctggtt cactgcgtcg
     7561 tgatattctt gcggtttgac tttttcaggt cgttcttcag gttcagaaac cttcattcat
     7621 catgactatg ttccagtatt acaaacgatc acggcatttt gttttttcag catttattgc
     7681 ttttgttttt gtcttgttat gccagaacac ggcgtttgcg cgggcgtcat cgaatggtga
     7741 tctgccgaca aaagcggacc tgcaggcgca acttgactca ctaaataaac aaaaagatct
     7801 ttctgctcag gacaaactgg agctgcagga tctgacagat acattagcca ccctcgataa
     7861 aatcgatcgc ataaaagaag agacagttca gctacggcaa aaagtcgctg aagcgccgga
     7921 aaaaatgcgc caggcgaccg cggcgttaac agcacttagc gatgtcgata acgacgaaga
     7981 aacgcgcaaa attctgagta cgctttcgtt gcgccagctg gaaactcgcg ttgcccaggc
     8041 gctggacgat ttgcaaaacg cacaaaacga tctggcgtct tataacagcc agctggtttc
     8101 gttacagacg cagcccgaac gcgtgcaaaa tgcgatgtat aacgcttcgc agcagctgca
     8161 acaaattcgc agtcgtctgg atgggactga tgtcggcgag actgccttac gtcccagcca
     8221 gaaagtgtta atgcaggctc agcaggcgtt gctgaatgcg gagattgacc agcagcgtaa
     8281 aagcctggaa gggaacaccg tcttgcagga taccttgcaa aagcaacgtg attacgtgac
     8341 ggcgaacagc gcccgtctgg agcaccagtt gcagctgttg caagaagcgg taaacagcaa
     8401 gcgcctgact ttaactgaaa aaacggcgca ggaagccgtc tccccggatg aagccgcgcg
     8461 tattcaggct aatccgctgg tgaaacagga actggaaatt aaccagcagt taagtcagcg
     8521 tctgattacc gcgactgaaa acggtaatca gttgatgcag caaaacatta aagtcaaaaa
     8581 ctggctggag cgggcgctgc aatcggaacg caatattaaa gagcagattg ccgtcctgaa
     8641 gggcagcctg ctgttgtctc gtatccttta ccagcaacaa caaacgctgc cctcggcgga
     8701 tgaactggaa aacatgacca accgcatcgc ggatttgcgt ctcgaacagt ttgaagttaa
     8761 ccagcagcgt gatgcactct tccagagcga tgcgttcgtc aacaaactgg aagaaggtca
     8821 caccaacgaa gtcaacagcg aagttcacga tgcgttattg caagtggttg atatgcgtcg
     8881 cgaattgctg gatcaactca acaaacagtt gggtaaccag ctgatgatgg ccattaacct
     8941 gcaaatcaac cagcagcagt taatgagcgt atcgaaaaac ctgaaatcca tcctgactca
     9001 gcaaatcttt tgggtgaaca gtaaccgtcc aatggactgg gactggatca aagcgttccc
     9061 gcaaagcctg aaagatgaat ttaagtcgat gaaaatcacg gtgaactggg aaaaagcctg
     9121 gcctgccgtt tttatcgctt tcctcgccgg tttgccgctg ctgttgattg tcgggctgat
     9181 ccactggcgt ctgggctggc tgaaagcgta tcaacaaaaa ctggcttccg ctgtgggttc
     9241 cctgcgtaac gatagccagc tcaacacacc aaaagcgatc cttatcgacc tgatccgcgc
     9301 gctgccggtg tgcctgatta ttctcgcggt tggcttgatt ctgttgacca tgcagctcaa
     9361 catcagcgaa ctgctatggt cgttcagcaa aaaactggcg attttctggc tggtgtttgg
     9421 cctgtgctgg aaggtactgg agaagaacgg cgttgccgtg cgtcacttcg gcatgccgga
     9481 acagcagacc agccactggc gtcggcaaat tgtccgcatc agtctcgcat tgctgcctat
     9541 ccatttctgg tctgtggtgg cagaactttc cccgctgcat ctgatggatg atgtgctggg
     9601 gcaagcgatg attttcttca acctgctgct gattgccttc ctggtatggc caatgtgccg
     9661 cgaaagctgg cgtgataaag agtcgcacac catgcgactg gtcaccatta ccgtgctgtc
     9721 gattatcccg attgcattga tggtgctgac tgccacgggt tatttctaca ccacgctgcg
     9781 cctctccggg cgttggattg aaaccgttta tctggtgatc atctggaact tgctctacca
     9841 gacggtattg cgcggcttaa gcgtagcggc gcggcgtatc gcctggcgtc gtgcgctggc
     9901 gcgtcggcag aatctggtga aagagggcgc agaaggtgcc gaaccgccgg aagaacccac
     9961 cattgcactg gaacaggtta accagcagac gctgcgtatt accatgttgc tgatgtttgc
    10021 gctgttcggt gtcatgttct gggcaatttg gtccgatttg atcaccgtgt tcagctatat
    10081 cgacagcatt acgctctggc attacaacgg tactgaagct ggcgctgcgg tggtgaaaaa
    10141 cgtcaccatg ggcagtctgt tgtttgcgat tatcgcctca atggtggcct gggcgttgat
    10201 tcgcaacctg cctggtttgc tggaagtgct ggtgctctcg cgactgaata tgcgccaggg
    10261 cgcgtcgtat gccattacta ccatccttaa ctacatcatt attgccgttg gtgcgatgac
    10321 ggtgttcgga tcgctgggcg tctcttggga taaactccag tggctggcgg cagcattatc
    10381 cgtaggtctt ggttttggtt tacaagaaat tttcggtaac ttcgtctccg gtttgatcat
    10441 tctgttcgaa cgtccggtgc gtattggcga tacggtaacc attggtagct tctcggggac
    10501 ggtaagtaag atccgtattc gtgcgacaac gattaccgat ttcgatcgca aagaagtgat
    10561 catcccgaac aaagcgtttg ttaccgagcg tctgatcaac tggtcgttga ctgacactac
    10621 tacgcgtctg gtgatccgtc tcggcgtggc ctatggctcc gatctggaaa aagtgcgtaa
    10681 agtgttactg aaggcggcga ctgagcaccc aagggtgatg cacgaaccaa tgccggaagt
    10741 cttctttacg gcgtttggtg ccagcacgtt ggatcatgag ctgcgtctgt atgtgcgtga
    10801 actgcgtgac cgtagtcgta ctgtcgatga gctgaaccgt actatcgatc agctgtgccg
    10861 tgaaaacgac atcaacattg cctttaacca gcttgaagtg catctgcaca acgagaaggg
    10921 cgatgaggtg acggaagtaa aacgcgacta caaaggcgat gacccgacgc cagcggtagg
    10981 gtaataacca aagggggcga catttagttg ccccgagatt actgacaaag tgcgcgttgt
    11041 tcatgccgga tgcggcgtga ccgccttatc cggcctacga aaccgcaaga attcaatgta
    11101 ttgcaggagc ggtgtaggcc tgataagcgt agcgcatcag gcagttttgc gtttgcccac
    11161 aatcttaggg gacatttagc ggccccattt atttctcact tttccgcctc atcatcgcgc
    11221 gttaatttct tttcataatc gcgttttaca atatccagcg cgcgcagcac ggtgcgggct
    11281 gggatctgat tttcttccag cagcacaatc aaatcgacag ccagtttgac atcgtcaggg
    11341 gcattttcca gtgacatact ctctccattg ctagcgggtt aagcgcgcta gcctgttttc
    11401 gattttttcc agcgcatggc ggcagcgtgc caggcgcgct tcataggctt ccacttcacg
    11461 atgcagcgtt tgctgttcca cgagatcggt cacccgcgcc aggcgggctc tgcgttcggc
    11521 aaccatctca cgtagccgcc gctcaaaatc ctgatgctga atacgtttac gctgccagcg
    11581 ggcaattttc ggtggcgcac tgtcccactc gcgcaatgac caggcggagg cttcacgcgc
    11641 gatggcttcc agttgtgccg ccagatgttc cgccagccag gccacttgcg gcagctgttg
    11701 ctgctcaact gcatgacgaa gcgcagccag attatcgcca gcctcatcga gacaagcctg
    11761 cagtgttgtc gtacgggttt gaaaaaggtg tctgtcaaaa cgggcactta gcgtggcaaa
    11821 ttgcgctacc ggggcacaac gctgacgcag cgtagcgagc tgtccttcca gtttttccag
    11881 cagcagggcg gttttcacga taagacctca atgaaaatga taattgttat gctaaagtag
    11941 ccactctgta agctgacaac actcaatatg caacgaatca ttttaatcat cattggctgg
    12001 ctggcggtag tgctgggtac gctgggcgtg gtattaccgg tattaccgac gacgccgttt
    12061 atcctgctgg cggcctggtg ctttgcccgt tcttccccgc gctttcacgc ctggttgctg
    12121 taccgctcat ggtttggcag ctatctacgt ttctggcaga aacatcatgc gatgccgcgc
    12181 ggcgtcaaac cgcgggcgat tttgcttatt ttgctcacgt ttgccatttc tctgtggttc
    12241 gtccagatgc catgggtgcg catcatgttg ctggtaattc tcgcctgttt gcttttctat
    12301 atgtggcgaa ttccggtgat tgatgaaaag caagaaaagc actgaagcac aacaatcgca
    12361 gttgcaatta ttgcgtacag ccagtacatt ctggcgtttt cgagcacagg cgcaggcggt
    12421 caaaggttaa acaactgtta cttttgatac gtttaaaacg cgccgtgagt accaccgtaa
    12481 caagcaggca tacacttatg accgcgactg cacagcagct tgagtatctc aaaaatagca
    12541 tcaaaagcat tcaggactac ccaaaacccg gcattctttt ccgcgatgtc accagcttac
    12601 tggaagaccc gaaagcttac gctctcagca tcgacttgct ggttgagcgt tacaaaaatg
    12661 cgggcattac caaagttgtc ggcaccgaag cgcgtggctt cttgtttggc gctccggtag
    12721 ctctgggtct gggcgttggc tttgtaccgg tccgtaaacc gggcaaactg ccgcgtgaaa
    12781 ccatcagtga aacttacgac ctggaatacg gcaccgatca gctggagatc cacgttgatg
    12841 ccatcaaacc gggcgacaaa gttctggtgg tggacgatct gctggcaacc ggcggcacta
    12901 tcgaagcgac cgttaaactg atccgtcgtc tgggtggtga agtggctgac gctgcgttca
    12961 ttatcaacct gttcgatctc ggcggcgaac agcgtctcga aaaacagggc attaccagct
    13021 acagccttgt cccgttcccg ggccattaat tatcgccagt cttgtgctgc ccacgctacg
    13081 gacagcacaa gatgtgcatt cagcctcgcc gttctgacgg ggctgtgtta gcattacccc
    13141 ttcgtgaatc caccttccag cgtttcagag cctgccaatg agttatcagg tcttagcccg
    13201 aaaatggcgc ccacaaacct ttgctgacgt cgtcggccag gaacatgtgc tgaccgcact
    13261 ggcgaacggc ttgtcgttag ggcgtattca tcatgcttat cttttttccg gtacccgtgg
    13321 cgtcggaaaa acctctatcg cccgactgct ggcgaagggg ctaaactgcg aaaccggcat
    13381 taccgcgacg ccgtgcggcg tgtgcgataa ctgtcgtgaa atcgagcagg ggcgctttgt
    13441 cgatctgatt gaaatcgacg ccgcctcgcg caccaaagtt gaagataccc gcgacctgct
    13501 ggataacgtc cagtacgctc cggcgcgtgg tcgtttcaaa gtttatctga tcgacgaagt
    13561 gcatatgctg tcgcgccaca gctttaacgc actgttaaaa acccttgaag agccgccgga
    13621 gcacgttaag tttctgctgg cgacgaccga tccacagaaa ttgccggtga cgattttgtc
    13681 gcgctgtttg caatttcatc tcaaggcgct ggatgtcgag caaattcgcc atcaacttga
    13741 gcacatcctc aacgaagaac atatcgctca cgagccgcgg gcgttgcaat tgctggcgcg
    13801 cgccgctgaa ggcagcctgc gagatgcctt aagtctgacc gaccaggcga ttgccagcgg
    13861 tgacggccag gtttcaaccc aggcagtcag tgcgatgctg ggtacgcttg atgacgatca
    13921 ggcgctgtcg ctggttgaag cgatggtcga ggccaacggc gagcgcgtaa tggcgctgat
    13981 taatgaagcc gctgcccgtg gtatcgagtg ggaagcgttg ctggtggaaa tgctcggcct
    14041 gttgcatcgt attgcgatgg tacaactttc gcctgctgca cttggcaacg acatggccgc
    14101 cattgagctg cggatgcgtg aactggcgcg caccataccg ccgacggata ttcagcttta
    14161 ctatcagacg ctgttgattg gtcgcaaaga attaccgtat gcgccggacc gccgcatggg
    14221 cgttgagatg acgctgctgc gcgcgctggc gttccatcca cgtatgcctc tgcctgagcc
    14281 agaagtgccg cgccagtcct ttgcacccgt cgcgccaacg gcagtaatga cgccaaccca
    14341 ggtgccgccg caaccgcaat cagcgccgca gcaggcaccg actgtaccgc tcccggaaac
    14401 caccagccag gtgctggcgg cgcgccagca gttgcagcgc gtgcagggag caaccaaagc
    14461 aaaaaagagt gaaccggcag ccgctacccg cgcgcgtccg gtgccatcgg cgctggaaaa
    14521 agcgccagcc aaaaaagaag cgtatcgctg gaaggcgacc actccggtga tgcagcaaaa
    14581 agaagtggtc gccacgccga aggcgctgaa aaaagcgctg gaacatgaaa aaacgccgga
    14641 actggcggcg aagctagcgg cagaagccat tgagcgcgac ccgtgggcgg cacgggtgag
    14701 tcaactttcg ctaccaaaac tggtcgaaca ggtggcctta aatgcctgga aagaggagag
    14761 cgacaacgca gtatgtctgc atttgcgctc ctctcagcgg catttgaaca accgcggtgc
    14821 acagcaaaaa ctggctgaag cgttgagcac gttaaaaggt tcaacggttg aactgactat
    14881 cgttgaagat gataatcccg cggtgcgtac gccgctggaa tggcgtcagg cgatatacga
    14941 agaaaaactt gcgcaggcgc gcgagtccat tattgcggat aataatattc agaccctgcg
    15001 tcggttcttc gatgcggagc tggatgaaga aagtatccgc cccatttgat cgtaagcaca
    15061 gcttacgttc gtcatcctta acgtgattga gagagaaacc tatgtttggt aaaggcggtc
    15121 tgggtaacct gatgaagcaa gcccagcaga tgcaagaaaa aatgcagaaa atgcaggaag
    15181 agatcgcgca gctggaagtc accggcgaat ctggcgcagg tctggtaaaa gtgaccatca
    15241 acggtgcaca caactgccgt cgcgtagaga tcgacccgag cctgctggaa gacgacaaag
    15301 agatgctgga agacctggtg gctgcagcat tcaacgacgc agcacgtcgt attgaagaaa
    15361 cgcagaaaga aaaaatggcc tctgtatcct ccggaatgca gctgccgcct ggctttaaga
    15421 tgccgttctg atgcaaacca gcccgctgtt aacacagctt atggaagcac tgcgctgtct
    15481 gtcgggcgtt ggcccgaagt cggcgcagcg tatggcgttc acgctgcttc agcgcgatcg
    15541 tagcggcggg atgcgtctgg cgcaggcgct cacccgggcg atgtcggaaa tcggccactg
    15601 cgccgattgc cgcactttca ccgaacagga agtctgtaac atctgttcga atccgcgtcg
    15661 tcaggaaaac ggtcaaatct gtgtggtgga gagtccggcg gacatctacg ccattgagca
    15721 gacggggcag ttttctggtc gttattttgt gttgatgggg catctgtcac cgctggacgg
    15781 catcggtccg gatgatatcg ggcttgatcg tctggaacag cgtctggcag aggaaaaaat
    15841 cactgaagtg atcctcgcca ccaatcccac ggttgaaggt gaagctaccg ctaactacat
    15901 tgccgagctt tgcgcgcaat atgacgtgga agctagccga atcgctcatg gcgtaccggt
    15961 tggcggcgaa ctggaaatgg tcgatggcac cacgctgtca cactcccttg ccgggcgtca
    16021 taagattcgt ttttaagcaa acgagagcag gatcacctgc tctcgcttga aattattctc
    16081 ccttgtcccc atctctccct catcctgttt ttaaccttaa aatggcatta ttgaggtaga
    16141 cctacatgaa aggacaagaa actcgtggtt ttcagtcaga agtgaaacag cttctgcacc
    16201 tgatgatcca ttctctctat tccaataaag aaatcttcct gcgtgagctt atctctaacg
    16261 cctccgatgc ggcggacaag ctgcgtttcc gtgcgctatc taacccggac ctgtacgaag
    16321 gtgatggcga actgcgcgtt cgtgtctctt tcgataaaga caagcgcacg ctgaccatct
    16381 ccgataacgg cgtggggatg acccgcgacg aagtgattga ccatctgggg actatcgcta
    16441 aatccggtac caaatcattc ctcgaatccc tgggttctga ccaggcgaaa gacagccagc
    16501 tgatcggtca gtttggtgtt ggtttctact ctgcgtttat cgtggccgac aaagtgactg
    16561 tgcgtactcg cgcggcaggc gaaaaaccag aaaacggcgt cttctgggaa tcggctggcg
    16621 aaggtgaata taccgttgcc gacatcacca aagaagatcg tggtactgaa atcaccctgc
    16681 atctgcgtga aggcgaagac gagttcctcg atgactggcg cgtgcgttcc atcatcagca
    16741 aatactccga ccatatcgcg ctgccggtag agatcgaaaa acgcgaagag aaagacggcg
    16801 aaaccgttat ctcctgggag aaaatcaaca aagcgcaggc gctgtggact cgtaacaagt
    16861 cggaaatcac cgatgaagag tacaaagagt tctacaaaca catcgcccac gactttaatg
    16921 atccgctgac ctggagccac aaccgcgttg aaggtaagca ggagtacacc agcctgctgt
    16981 acatcccgtc ccaggctccg tgggatatgt ggaaccgtga tcataaacac ggcctgaaac
    17041 tgtacgtcca gcgtgtgttc atcatggacg acgcagaaca gttcatgccg aactatctgc
    17101 gcttcgtgcg tggtctgatt gactccagcg atctgccgct gaacgtttcc cgtgaaatcc
    17161 tccaggacag cacggtaacg cgtaacctgc gcaatgcgct gaccaagcgt gtgctgcaaa
    17221 tgctggaaaa actggcgaaa gacgacgcgg aaaaatacca gaccttctgg caacagtttg
    17281 gcctggtact gaaagaaggt ccggcggaag atttcgctaa ccaggaagcg atcgccaaac
    17341 tgctgcgttt tgcttctacc cataccgatt cttctgcgca gaccgtatct ctggaagact
    17401 acgtttcccg catgaaagaa gggcaggaga aaatctacta catcaccgca gacagctatg
    17461 cggcagcgaa gagcagcccg cacctggaac tgctgcgtaa gaaaggcatc gaagttctgc
    17521 tgctttccga ccgcatcgat gagtggatga tgaactatct gactgagttc gacggtaaac
    17581 cgttccagtc ggtgtctaaa gttgacgagt cgctggaaaa actggctgac gaagttgatg
    17641 agagcgcgaa agaagcggag aaagcactga ctccgttcat cgaccgtgtg aaagccttgc
    17701 tcggcgagcg cgtgaaagat gtccgtctga ctcaccgtct gaccgatacg ccagcgatcg
    17761 tttcgaccga cgcggacgaa atgagcactc agatggcgaa actgttcgct gcggcgggcc
    17821 agaaagtgcc agaagtgaaa tacatcttcg aactgaaccc ggatcacgta ctggtgaaac
    17881 gtgcggcaga tactgaagat gaagcgaagt tcagcgagtg ggtagaactg ctgctggatc
    17941 aggcgctgct ggcagaacgc ggcacgctgg aagatccgaa cctgtttatt cgtcgtatga
    18001 accagctgct ggtttcctga tgtcatgccg gatgaccttt gtgtcatccg gcatttttct
    18061 tttcatcatc tgcactttcc gcaaattatc tcgccattaa ccgtttcagc ctcaggtgcc
    18121 tttcttgagg caatcgcctg ttggtggtat cgtttatcgc tttttcaaaa aattcgacac
    18181 attttaaggg gattttcgca atgcgtatca ttctgcttgg cgctccgggc gcggggaaag
    18241 ggactcaggc tcagttcatc atggagaaat atggtattcc gcaaatctcc actggcgata
    18301 tgctgcgtgc tgcggtcaaa tctggctccg agctgggtaa acaagcaaaa gacattatgg
    18361 atgctggcaa actggtcacc gacgaactgg tgatcgcgct ggttaaagag cgcattgctc
    18421 aggaagactg ccgtaatggt ttcctgttgg acggcttccc gcgtaccatt ccgcaggcag
    18481 acgcgatgaa agaagcgggc atcaatgttg attacgttct ggaattcgac gtaccggacg
    18541 aactgattgt tgatcgtatc gtaggccgcc gcgttcatgc gccgtctggt cgtgtttatc
    18601 acgttaaatt caatccgccg aaagtagaag gcaaagacga cgttaccggt gaagaactga
    18661 ctacccgtaa agacgatcag gaagaaaccg tacgtaaacg tctggttgaa taccatcaga
    18721 tgactgcacc gctgatcggc tactactcca aagaagcgga agcgggtaac accaaatacg
    18781 cgaaagttga cggcaccaag ccggttgctg aagttcgcgc tgatctggaa aaaatcctcg
    18841 gctaatcaag ccgcagcaga tctgctttcg ggcaggtctg ctcatccacc tcaggcaata
    18901 cctctcacag caattagttc ttcttcctca cttttccgct acaattatca acaagttgaa
    18961 tcgataagag gcggtaatgc gtcagactaa aaccggtatc ctgctggcaa acctgggtac
    19021 gcccgatgcc cccacacctg aagcggtaaa acgctatctg aaacaatttt taagcgacag
    19081 acgcgtggtt gatacctcac ggttgttatg gtggccattg ctgcgcggcg ttattttgcc
    19141 gctgcgctcg ccgcgtgtgg cgaagctgta tgcctctgtc tggatggaag gtggctcgcc
    19201 gctgatggtt tacagccgcc agcaacagca ggcgctggca caacgtttac cggagacgcc
    19261 cgtagcgctg ggaatgagct acggctcgcc atcactggaa agcgccgtcg atgaactcct
    19321 ggcagagcat gtagatcata ttgtggtgct gccgctttat ccgcaattct cctgttctac
    19381 ggtcggtgcg gtatgggatg aactggcacg cattctggcg cgcaaacgta gcattccggg
    19441 gatatcgttt attcgtgatt acgccgataa ccacgattac attaatgcac tggcgaacag
    19501 cgtacgcgct tcttttgcca aacatggcga accggatctg ctgctgctct cttatcatgg
    19561 cattccccag cgttatgcag atgaaggcga tgattacccg caacgttgcc gcacaacgac
    19621 tcgcgaactg gcttccgcac tggggatggc accggaaaaa gtgatgatga cctttcagtc
    19681 gcgctttggc cgggaaccct ggctgatgcc ttataccgac gaaacgctga aaatgctcgg
    19741 agaaaaaggc gtaggtcata tacaggtgat gtgcccgggc tttgctgcgg attgtctgga
    19801 gacgctggaa gagattgccg agcaaaaccg tgaggtcttc ctcggtgccg gcgggaaaaa
    19861 atatgaatat attccagcgc ttaatgccac gccagaatat atcgaaatga tggctaatct
    19921 tgttgccgcg tatcgctaaa gctgagcggt aaagaactga gcgccgtcgc gaagagcctc
    19981 gtcggcggtt ttcatcattc gtgaataatg caaaaaggca tgcagcgtac ctgggtagag
    20041 tttgaactca cagggctgct gatgcgccgc taacgtctgg taaagcagac ggctgtcatc
    20101 cagcagcgga tcgaactccg ccccggcaat aaaacagggc ggaacttcgc gagtgagatc
    20161 attattaaac agacagtaat acggtgactc gcggtccgcg tcgttgctta aatacgcctc
    20221 ttcatacatc tgcaaatcct gttgcgttaa gccatcccag acaccgccca acagacgacg
    20281 agtcacggaa tcccgtaatc cgtaaagccc ataccacagc aaaacacccg caattttacc
    20341 gcaatcgatc tgtttatcac gcaaccacaa cgcactggcg agcgccagca tggcacctgc
    20401 ggaatcaccg gcaaagccaa tgcgggacat attgatttga taatcctccg cctgctggtg
    20461 gaaataacaa caagcagcca caatttcctc tatcgcttgc ggaaaacgcg cttcaggtga
    20521 aagggggtaa tcaataccaa tcaccgtaca ttggctgtag cttgccagca ggcgcatgat
    20581 gcgatcgtgg gtatcgagat tgccgagaat aaaaccgcct ccatgcaaat aaaatagcgt
    20641 cgccgggcta tctggctgcg gacaaaagag acgtgtttcc acctgcccat attttgttgg
    20701 aaccatgtaa gctctggttg ccatttctgg agcgcccgca ttccagaatc ggcgctcaag
    20761 cgtgtaatac tgtcgttgct cagcaatcgt tcccgttgcg ggccaggacg gtaaatccgg
    20821 ctgaagagta ttcacaacgg tcttcatttc agcagaaata aggtccagaa caggtagttt
    20881 gttttccggc ttcatacaaa aactcctttc aaattacgtc attgtaagga accactgcca
    20941 tgaaaatgcg atcccgcctg ctgatattga aactggctgc gtctcgcgcg ctcccgtcag
    21001 attgtgttaa cattcgccgc tcagttaacc acccgtaaaa acaaccatga aatttcccgg
    21061 taaacgtaaa tccaaacatt acttccctgt aaatgcacgc gatccgctgc ttcagcaatt
    21121 ccagccagaa aacgaaacca gcgccgcctg ggtcgtaggt attgaccaga cgctggtcga
    21181 tattgaagcg aaagtggatg atgaattcat tgagcgttat ggattaagcg ccgggcattc
    21241 actggtgatt gaggatgacg tagccgaagc gctttatcag gagctaaaac agaaaaacct
    21301 gattacccat cagtttgcgg gtggcaccat tggtaacacc atgcacaact actcggtgct
    21361 cgcggacgac cgttcggtgc tgctgggcgt catgtgcagc aatattgaaa ttggcagtta
    21421 tgcctatcgt tacctgtgta acacttccag ccgtaccgat cttaactatc tacaaggcgt
    21481 ggatggcccg attggtcgtt gctttacgct gattggcgag tccggggaac gtacctttgc
    21541 tatcagtcca ggccacatga accagctgcg ggctgaaagc attccggaag atgtgattgc
    21601 cggagcctcg gcactggttc tcacctctta tctggtgcgt tgcaaaccgg gtgaacccat
    21661 gccggaagca accatgaaag ccattgagta cgcgaagaaa tataacgtac cggtggtgct
    21721 gacgctgggc accaagtttg tcattgccga gaatccgcag tggtggcagc aattcctcaa
    21781 agatcacgtc tctatccttg cgatgaacga agatgaagcc gaagcgttga ccggagaaag
    21841 cgatccgttg ttggcatctg acaaggcgct agactgggta gatctggtgc tgtgcaccgc
    21901 cgggccaatc ggcttgtata tggcgggctt taccgaagac gaagcgaaac gtaaaaccca
    21961 gcatccgctg ctgccgggcg ctatagcgga attcaaccag tatgagttta gccgcgccat
    22021 gcgccacaag gattgccaga atccgctgcg tgtatattcg cacattgcgc cgtacatggg
    22081 cgggccggaa aaaatcatga acactaatgg agcgggggat ggcgcattgg cagcgttgct
    22141 gcatgacatt accgccaaca gctaccatcg tagcaacgta ccaaactcca gcaaacataa
    22201 attcacctgg ttaacttatt catcgttagc gcaggtgtgt aaatatgcta accgtgtgag
    22261 ctatcaggta ctgaaccagc attcacctcg tttaacgcgc ggcttgccgg agcgtgaaga
    22321 cagcctggaa gagtcttact gggatcgtta agttatcgtc ggttcgtagg ccagataagg
    22381 cgttcacgcc gcatctggca tttggctctc gatgcctgat gcgacgctgg cgcgtcttat
    22441 catgcctaca tatttttcat attttacatc cggcaaccac cgtttacccc gtcaccacct
    22501 cacccgccgg tggcgtttcc agcagttcca gcatggtacg ggcgatttca cgctcgccca
    22561 tcactacctg attcgcacca cgttcggtga tatacgccac ttcatcgtca taatgggcgc
    22621 gggcaataat ctcaatatcc ggatttttcg cgcgggcaga tgccacaatc tcacccgctt
    22681 cataaccgtt gggaatcgtc aggatcagcc attttgcaca ttccagatgc gccagttgca
    22741 taatttcttc gttcgccgca ttgcccaata ctgcgcggac cccgcgctct cgcagctcat
    22801 caacacgggt tcgtgacgtc tcaatcacca ccagcggaat atcagaggcg agcaatttct
    22861 cccccagcag gctgcctaca cgaccgtaac ccaccagtag cgcatggttg caaatatcca
    22921 ctgggatctg cttctcttct tcgattgcct cttccagcgt ctgctcttcc agcgtttcgg
    22981 tcttcgccag atatttctcc agtagtgcga acagtaccgg gttgagcata atcgacagga
    23041 tcgcccctgc cagtaccagg ttttgtccgg cctgcggcag taaattcaat gccattccca
    23101 gtcccgccag gataaacgcg aactcaccaa tctgcgccag gctggcggcg atggttaatg
    23161 ccgtacgttg ggagtgacca aacagtcgca ccaggaaaaa tgcggctaac gacttaccaa
    23221 acagaataat cgccagcgtc gccagcactg ccagcggttg ctgaatcaga attaacggat
    23281 caaacaacat cccgacggag acaaaaaaca gcaccgcaaa cgcgtcgcgc aatggcagcg
    23341 tatcgtgggc ggcacggtga ctcagttcag actcgttcag taccatcccg gcaaagaacg
    23401 caccgagtgc aaaggagaca tcaaacagct ctaccgcacc aaaggcaatc cctaacgcca
    23461 gcgccagcac cgacagggta aacagctcgc gagaaccggt tgccgcgctg cgtgccataa
    23521 tccacggcac cagacggcga cctaccagca tcataatggc gataaatgcg atcactttgc
    23581 cgatggtgat ccccatatcg actgcaagag tggcaaagcc cacatcgccc tgttccatca
    23641 ttcctgcaac tgcgggcagc aacaccagcg tcagaaccat taccaggtct tccacaatca
    23701 accaaccgat ggcgatttgc ccacgctgac tgtcaattaa ttgccgttct tcaagtgcgc
    23761 gcagtaacac cacggtactg gcggtggaaa gacataaacc gaacacgata ccggtcatta
    23821 acgaccagcc cagcacggca gagagcgcca tacccagcag cgtcgccacg gctatctggg
    23881 cgatcgcacc gggaatggcg atggccttta ccgccatcaa atccttcagc gaaaagtgca
    23941 aaccgacgcc aaacatcaac agaatgacgc ccagttcagc cagttccggc gcaagcttgg
    24001 tatcggcaac aaagcccgga gtgaatggtc ctgccagcac acccgctaac agatatccca
    24061 ccagaggaga aatacgtagt ttattggcca gcatgccgag gataaaggcg agcacaaggc
    24121 cgccaacaat ggtggtgata agcggggtgg cgtgatgcat tccgtctcct tttcctggtg
    24181 gttattgtcc atttttggcc gggaaaacca aaattacagg taatagttta tgacaatttc
    24241 attgatgatg ttcatgaata attattgaat tttgcagaaa aatggaatta gctgcaaaaa
    24301 aagcacggat cggaaaacag aaggcggttt aacagaggaa aggcttatgg cgactgtaaa
    24361 acgatgcagc caaagtttgc ctttggctgc aatgaaatca gtctttatgc cggttatcag
    24421 gcaggaatat ggtcaacatc cccaatagtg gcaggaaagc acagatttta tagactaact
    24481 cgatgctggt gtgatcggcg ataagcccca gaactgccgc tcccagacct cccatgccaa
    24541 aagcaaaacc gaaaaagagt ccagaaacca taccgatacg tcccggaagt agctcctgag
    24601 cgtagaccag aatggcagag aatgccgaag cgaggataaa tccaataatc accgttaaaa
    24661 cccccgtcca gtgcaggctg gcgtagggta aaatcagcgt aaacggcgca acgccgagga
    24721 tagagcccca aatcacatat ttccgtccaa ttttatcccc tacaggcccg ccgatcaccg
    24781 tacctgccgc aacggcaaac aggaaggcaa acagatgaag ctgggcattc tggatagata
    24841 atccgaattt ttgcatcaga taaaaggtgt aatag
//
LOCUS       DADKRT010000046        24746 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.046, whole genome shotgun sequence.
ACCESSION   DADKRT010000046 DADKRT010000000
VERSION     DADKRT010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24746
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.046"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(270..695)
                     /locus_tag="JQ356_001579"
     CDS             complement(270..695)
                     /locus_tag="JQ356_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016232644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HAY4621715.1"
                     /translation="MAKVFTQEEREKIKGQVVELVRLSGRETLRQLEAKTGATRYLMS
                     VLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRAKVKKPAVVDPDLIWSLPDG
                     EIRRYDRRLNIICRECRKSEAMQRVLAFYQGNVRYFRRY"
     gene            complement(711..1481)
                     /locus_tag="JQ356_001580"
     CDS             complement(711..1481)
                     /locus_tag="JQ356_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1627 domain-containing protein"
                     /protein_id="HAY4621716.1"
                     /translation="METVSDALKALKKASSHVVAARLGISREEAVNELWELKRKGVVD
                     KTGHTWFLAGEGESRVTEERPVKSEAQDMLTGEVEQKVTADMMIEFIGQDGAKTCEEL
                     AGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCMPGDNLPAEPKAALVTESDGKA
                     FPQPAGAALPVREAATQEEIKTETVADIVQPLPSFTETQADELIFPSLRRANLALRRA
                     KSDVQKWERVCAALRELNKHRDIVRQITDSSRRVVSEK"
     gene            complement(1503..2245)
                     /locus_tag="JQ356_001581"
                     /pseudo
     CDS             complement(1503..2245)
                     /locus_tag="JQ356_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309101.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(2252..3214)
                     /locus_tag="JQ356_001582"
     CDS             complement(2252..3214)
                     /locus_tag="JQ356_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310303.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY4621717.1"
                     /translation="MSSKLHGLVWEGCAFTGMILSRVAVMARLADYSNDEGVSWPAIE
                     TIRRQIGARSESTVKSAIAELAKEGWLTKEERKVGGRNVSNIYRLNVEKLEAAAAAAR
                     ESYKPKRKISPAKNDPLTVDPSNIDPSTVDPSNFDGSTVDKKLPIRGAMIDPDPSVLK
                     PDPSDKRSSCPDASQPDPQTAEQDFLTRHPDAVVFSAKKRQWGSQEDLVCAQWIWGRI
                     VSLYEQAASYDGEITRPKEPNWTAWANDVRTMRMLDGRTHRQICEMFGRLQRDSFWVK
                     NIMSPAKLREKWDELVIRLGRSPAQRCVNHISEPDTEIPPGFRG"
     gene            complement(3237..3662)
                     /locus_tag="JQ356_001583"
     CDS             complement(3237..3662)
                     /locus_tag="JQ356_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HAY4621718.1"
                     /translation="MKIKHEHIRMAMNAWAYPDGEKVPAAEIARTYFELGMTFPELYD
                     DSHPEALARNTQKIFRWLDKDPPDAVEKMQALLPAIEKAMPPLLVARMRSHSSEYYRE
                     IVERRDRLVKDVDDFVASAVVLYDQMNRGGPAGNAVVMH"
     gene            complement(3646..3969)
                     /locus_tag="JQ356_001584"
     CDS             complement(3646..3969)
                     /locus_tag="JQ356_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY4621719.1"
                     /translation="MKKDNYSFKRACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPA
                     ERCPAIERATKGGVLCEELRPDVDWTYLRRSSCYSQNMSMKQPNDENDHTRSIKRQMI
                     HENQT"
     gene            4094..4570
                     /locus_tag="JQ356_001585"
     CDS             4094..4570
                     /locus_tag="JQ356_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621720.1"
                     /translation="MLSGKDLGRAIEQAINKKIASGAVKSKAEIARHFKVQPPSIHDW
                     IKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPSTSDTKSELLDINSLYQAASD
                     EKKAIVAFILSGNATEPSWVDYDVRAYIAAMEMKVANYLKNQESKRKSQNITKTGT"
     gene            4889..5041
                     /locus_tag="JQ356_001586"
     CDS             4889..5041
                     /locus_tag="JQ356_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 domain-containing protein"
                     /protein_id="HAY4621721.1"
                     /translation="MDTIELGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRW
                     LTRNTD"
     gene            5053..5373
                     /locus_tag="JQ356_001587"
     CDS             5053..5373
                     /locus_tag="JQ356_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621722.1"
                     /translation="MEFKDLPVPFQEMASNVVRSQLATLDLSTVEKETIDNISGNVRR
                     AFIGLYEEKQLSDNQDLHEKYFLDLMDIIDKGFGLLMKKKGIRIEPLENYFATKSINS
                     FDSK"
     gene            complement(5351..5788)
                     /locus_tag="JQ356_001588"
     CDS             complement(5351..5788)
                     /locus_tag="JQ356_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001351093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621723.1"
                     /translation="MNQLPRRALSRYGLTFQGNILSVNCQCRMLTRVRRTHSTSPVEN
                     SLITNPQEGEMSTENDEIINSLIRQINNFDKALQHAAARSDITLLAISFLASVMDKNE
                     VVRQSLVDYIDSLQPGTFNHESFNHEKEHVKSVINSLILNQKN"
     gene            6188..6376
                     /locus_tag="JQ356_001589"
     CDS             6188..6376
                     /locus_tag="JQ356_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibition protein DicB"
                     /protein_id="HAY4621724.1"
                     /translation="METLLPNINTSEGCFEIGVTISNPVFTEDAINKRKHERELLNKI
                     CILSMLARLRPIQKGCWQ"
     gene            6373..6564
                     /locus_tag="JQ356_001590"
     CDS             6373..6564
                     /locus_tag="JQ356_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1482 family protein"
                     /protein_id="HAY4621725.1"
                     /translation="MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGN
                     CYPVDKVIHQDNNEIPAGL"
     gene            6657..9128
                     /locus_tag="JQ356_001591"
     CDS             6657..9128
                     /locus_tag="JQ356_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease"
                     /protein_id="HAY4621726.1"
                     /translation="MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDERRARAKFHWQF
                     LEHYPAAQDCAYKFLVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPM
                     NVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEV
                     NAMYPELKLHAIGWVKHKCKPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARA
                     RTNQQHSENSTGKISPVIAAIHREYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWA
                     KNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPVALNKYITEY
                     LTTKGVFEDEGRNQSATDTLSSPVPETDAVETAIPGNEKTECKVEVEPSVEREGPFYF
                     LFTDKDGEKYGRANKLSGLEKALALGATEITKEEYFARKNGTYSGSQQNTGASDTTAQ
                     PEPVKVTADEVNKIMQAANISQPDADKLLAASRGEFVAGISDPNDPKWVKGIETRDSV
                     NQNQQESEQNDQKAEQNSPNTQQNEPETKQPEPVAQQEPEKVCTACGQSGGGNCPDCG
                     AVMGDATYQETFDEENQVEVQENDPKEMEGAEHPHKENAGSAQDHASDSETGETADPL
                     IAMNGHHVITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTID
                     LETAGGVIDRDVIKRWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWG
                     NGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNA
                     LDDARYQAKYISVIWQKLIPNQADF"
     gene            9193..9441
                     /locus_tag="JQ356_001592"
     CDS             9193..9441
                     /locus_tag="JQ356_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase"
                     /protein_id="HAY4621727.1"
                     /translation="MARLILLTEWAKEEFSEPVPTPSTLSKYAKAGMIFPLPKKVGRR
                     WRVDPQARFVGMVNKPEVIATDHPALKRILEDGAPAKI"
     gene            9419..10549
                     /locus_tag="JQ356_001593"
     CDS             9419..10549
                     /locus_tag="JQ356_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4621728.1"
                     /translation="MARPRKYKTDVPGLSPYFDKRNNKVYWRYRHPITGKNHGLGSID
                     QKLAETIAAEANSRLARQQMEQMLSLQEKIISDTGGSSTVTIFLNNYRKIQQERYENG
                     EIKLNTLKQKAAPLRVFDERFGTRRLDAITVKDVVSVLEEYKARGHNRMGQIFRKVLI
                     DVFREAQQTGDVPPGFNPAESAKKPQVRISRQRLTFDEWMMIYNAAEKDGYFLQRGML
                     LALMTGQRLSDICKMQFSDIRDGYLHVEQQKTGTRIAIPLALRCDKLNLTLDDVVSSC
                     RDCVLSPWLLHHHHAKGTAKRGGMVKPATLTVAFKKARDSVDYNWRANGTPPSFHEQR
                     SLSERLFREQGVDTKILLGHSNQKMTDIYNDARGKEWKKLVI"
     gene            complement(10595..11233)
                     /gene="ompW"
                     /locus_tag="JQ356_001594"
     CDS             complement(10595..11233)
                     /gene="ompW"
                     /locus_tag="JQ356_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HAY4621729.1"
                     /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
                     TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
                     TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
                     VDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF"
     gene            11473..11562
                     /locus_tag="JQ356_001595"
                     /pseudo
     CDS             11473..11562
                     /locus_tag="JQ356_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            11590..12333
                     /locus_tag="JQ356_001596"
     CDS             11590..12333
                     /locus_tag="JQ356_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HAY4621730.1"
                     /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
                     DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL
                     IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
                     APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
                     GAVLANTLSNLISAVLLIYLFRLYMLIRQ"
     gene            12363..12902
                     /locus_tag="JQ356_001597"
     CDS             12363..12902
                     /locus_tag="JQ356_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HAY4621731.1"
                     /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
                     RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
                     RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGIYIYRHMPQEDKS"
     gene            13007..13405
                     /gene="yciA"
                     /locus_tag="JQ356_001598"
     CDS             13007..13405
                     /gene="yciA"
                     /locus_tag="JQ356_001598"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HAY4621732.1"
                     /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE
                     PIGQRYKATEALFKYVAVDPEGKPRALPVE"
     gene            complement(13445..14164)
                     /gene="tonB"
                     /locus_tag="JQ356_001599"
     CDS             complement(13445..14164)
                     /gene="tonB"
                     /locus_tag="JQ356_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HAY4621733.1"
                     /translation="MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQP
                     ISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKP
                     VKKVQEQPKRDVKPVESRPASPFENTALARLTSSTATAATSKPVTSVASGPRALSRNQ
                     PQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPG
                     KPGSGIVVNILFKINGTTEIQ"
     gene            14388..14684
                     /locus_tag="JQ356_001600"
     CDS             14388..14684
                     /locus_tag="JQ356_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009448315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HAY4621734.1"
                     /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
     gene            14984..16237
                     /gene="kch"
                     /locus_tag="JQ356_001601"
     CDS             14984..16237
                     /gene="kch"
                     /locus_tag="JQ356_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HAY4621735.1"
                     /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
                     LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
                     TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
                     LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
                     SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
                     EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCLAILALSDNDADNAFVVLSAKD
                     MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
                     NSGHGIFSDNDEQETKADSKESAQK"
     gene            complement(16292..16465)
                     /locus_tag="JQ356_001602"
     CDS             complement(16292..16465)
                     /locus_tag="JQ356_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HAY4621736.1"
                     /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN
                     KQRNSLLFAIYNI"
     gene            16608..18068
                     /gene="cls"
                     /locus_tag="JQ356_001603"
     CDS             16608..18068
                     /gene="cls"
                     /locus_tag="JQ356_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HAY4621737.1"
                     /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
                     LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
                     DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL"
     gene            18103..18432
                     /locus_tag="JQ356_001604"
     CDS             18103..18432
                     /locus_tag="JQ356_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309775.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HAY4621738.1"
                     /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE
                     RGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL
                     CHIIWRE"
     gene            complement(18485..19489)
                     /gene="oppF"
                     /locus_tag="JQ356_001605"
     CDS             complement(18485..19489)
                     /gene="oppF"
                     /locus_tag="JQ356_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HAY4621739.1"
                     /translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGIKPDEWRAVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
                     KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            complement(19486..20499)
                     /gene="oppD"
                     /locus_tag="JQ356_001606"
     CDS             complement(19486..20499)
                     /gene="oppD"
                     /locus_tag="JQ356_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppD"
                     /protein_id="HAY4621740.1"
                     /translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTTVNDLNF
                     SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLR
                     AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
                     RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
                     NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
                     AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTLGRLCACFKPVE
                     ELL"
     gene            complement(20511..21419)
                     /gene="oppC"
                     /locus_tag="JQ356_001607"
     CDS             complement(20511..21419)
                     /gene="oppC"
                     /locus_tag="JQ356_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HAY4621741.1"
                     /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFIHNRAAVASLM
                     VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR
                     ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
                     GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNV
                     LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
                     GFLVVTLFCFNFIGDGLRDALDPKDR"
     gene            complement(21434..22354)
                     /gene="oppB"
                     /locus_tag="JQ356_001608"
     CDS             complement(21434..22354)
                     /gene="oppB"
                     /locus_tag="JQ356_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HAY4621742.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
                     VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
                     AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW
                     LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            complement(22440..24071)
                     /gene="oppA"
                     /locus_tag="JQ356_001609"
     CDS             complement(22440..24071)
                     /gene="oppA"
                     /locus_tag="JQ356_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HAY4621743.1"
                     /translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
                     NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL
                     RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL
                     GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
                     LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
                     QGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN
                     TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
     gene            24362..24658
                     /locus_tag="JQ356_001610"
     CDS             24362..24658
                     /locus_tag="JQ356_001610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621744.1"
                     /translation="MRFLLANTFCKIVKQFSFIDRIRIYSLHPCLNKHLSIQSNRDWL
                     SMSIFSDYSFSIEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT"
BASE COUNT         6460 a         6100 c         5766 g         6420 t
ORIGIN      
        1 tcaccggaac atggagcaca gcaagagtgc agtagtagtt tgtttgcccc gtttgggagc
       61 tccaatttag gccgtttgaa atcagcaata gtcataaata tttttattgg ggtcatgaaa
      121 atagcacaga gtgtagcatc agagcagggc tatcgggaat atatgtctaa atctggtaat
      181 atctggtttt gacgcaaagc ggacaaccac gctggctcta ccctgcgcca tgaaaatgtc
      241 aattcacatc tgaactaatg ctctttaatc tagtaacgtc taaaatacct aacatttcct
      301 tgataaaatg ccagtacacg ctgcatagct tcgctcttcc ggcactcgcg acagattata
      361 ttcaggcgcc tgtcgtagcg gcgtatttcg ccgtctggta acgaccagat aaggtccgga
      421 tcaaccactg caggtttctt cacctttgcc cttgagagtt ttttgcgagc attttgccag
      481 tccttacgcg cctgttcaga cgggaataac ccgtaaccag agttgtatac atcgccactg
      541 gcaaccagct ctctggcgag aacactcatc agatatcttg tcgcacctgt cttggcttcc
      601 agttgccgca acgtctcgcg accgctcaga cgtacaagtt caacaacctg ccctttaatt
      661 ttttcccgct cttcttgtgt aaatactttt gccataagcg cctccggcaa tcacttttcc
      721 gatacaacac ggcgggaaga atcagtaatc tgtcgaacaa tatcccggtg cttgttcagc
      781 tcccgcagcg cggcgcagac tcgctcccac ttctgaacat cacttttcgc cctgcgcagc
      841 gccaggtttg ccctgcgaag ggacggaaaa atcagctcat ctgcttgcgt ttcggtaaac
      901 gatggcaacg gctgcacaat gtccgccaca gtttctgttt taatttcttc ctgtgttgcg
      961 gcttcccgga ctggtaacgc agcacctgct ggctgaggaa aggccttacc atcactttcc
     1021 gttaccagcg cggctttcgg ctctgctggt aaattatcgc ccggcatgca gtaacgaaat
     1081 ttaccgttct gattaacgcg tgccagccgc cccgttgcgg ttaccaccgc cagcgtggaa
     1141 gcaaccttgc gagtactgac accgaactta cccgccagtt cctcacacgt tttagcccca
     1201 tcctgaccga taaactcaat catcatgtct gcggtaactt tttgttcgac ctccccggtc
     1261 agcatatcct gtgcttcaga ttttactggc cgctcttcgg ttacccggga ttcaccttcg
     1321 ccagccagaa accaggtgtg accagtttta tcaacgacgc cttttctttt gagttcccac
     1381 agctcgttga cagcctcttc acgactgatt ccaaggcgag ctgccaccac atgtgaagag
     1441 gcttttttca gtgctttcag tgcgtcagat acggtttcca ttaaaatttc ctccggacaa
     1501 aattacttca caaccctcat attgctgaca tttggacgcc agctatccca gttaaacgtc
     1561 acccatcgac caccgttcat ggtcatgcgg tccataatcc tctcaccaag aagcgtactc
     1621 attgcggcat gattcaggtt tgttaacatc ccgacactgc acagtgatgc tgtccggcga
     1681 tcaattatct ggtgcaatac cacctgctcg tttttcgtct cccgctgaac gcctatttca
     1741 tccaggacca gcaaatcaac cccgcaaagc tcctgtattt ttccccggat ttgccgttgt
     1801 cgtagctgtc atgcaacacg ctcatgacgt cagacacggt gacgataatc acgctgcgcc
     1861 ccttcaccat cagccggttg cccatcgccg ctgcaaggtg atttttcccg gtgccggttt
     1921 taccgctgaa cacaaaattc gtgcacccgg tcatcagttc gtcagctatg gatttggcct
     1981 ggctcagcgc gtatttttgc ccgtcgttct gcacctgata atttgcaaac gagcatttgc
     2041 tgtgcagagg ctggatgccc gaacgattca ggattttttc cacccgcaac tggcgattct
     2101 ggcggttaat ctcctcgctg cgttttcgtc cttcagcaag ttgccattcc cgccactcct
     2161 ccaccgtccg gtacggtgga accgacccct gtggtgcaag tctgcgaata cgttcaagaa
     2221 ccccaactgc cgcaatgttt ttcatgacac gtcaccccct gaatcccggc ggtatttcag
     2281 tgtccggttc agaaatgtga ttcacacaac gctgcgcagg cgaacgcccc aggcggataa
     2341 ccagttcatc ccatttttcc cggagttttg ccggactcat gatgtttttt acccagaacg
     2401 aatcccgctg gagacgccca aacatttcac aaatttgtct gtgagttctg ccatccagca
     2461 tccgcattgt gcgaacgtca ttggcccatg ctgtccagtt gggttctttc ggtctagtga
     2521 tctcgccatc atagctggcc gcctgctcgt aaagactcac gattcgtccc cagatccact
     2581 gtgcgcacac caaatcttcc tgacttcccc actggcgttt tttcgcactg aacacaaccg
     2641 cgtcagggtg tcgggttaaa aaatcctgtt cagccgtctg cgggtccggt tgcgaagcgt
     2701 ccggacaaga agatctttta tctgacggat caggttttaa tactgacgga tcggggtcaa
     2761 tcatcgcccc cctaatcggc agttttttat caacagttga tccatcaaaa tttgacgggt
     2821 caaccgttga ggggtcaata tttgacgggt caactgttaa cgggtcattt tttgccgggc
     2881 taatttttct tttcggttta tatgactcac gcgccgccgc cgcagctgct tcgagttttt
     2941 ccacattaag ccgatagata ttgcttacat tacgcccacc gaccttacgc tcttccttcg
     3001 tcagccagcc ctctttcgcc agttctgcaa tagccgattt cactgtggat tcacttcttg
     3061 caccgatctg acgccggata gtttcaatgg caggccatga cacgccctcg tcattgctgt
     3121 agtctgcaag acgggccata accgccaccc tggataagat catgccggtg aaggcgcacc
     3181 cttcccagac aagaccatga agcttgctgc tcataaaacc cccgaacacc gtgcttttag
     3241 tgcatcacca cagcattccc tgccgggccg ccgcgattca tctggtcata caaaacaacc
     3301 gctgacgcaa caaaatcatc gacatccttc accagccgat ccctccgttc gacgatctca
     3361 cggtaatatt cagaactgtg gctgcgcata cgggccacca gcaaaggcgg catcgccttt
     3421 tcgatcgccg gtaacagagc ctgcattttt tcaacagcat caggggggtc tttatccagc
     3481 caacggaaaa ttttctgggt attacgggcc agggcttccg gatggctgtc gtcgtacagt
     3541 tcagggaacg tcatccccag ttcgaaataa gtccgggcta tttcagctgc aggaactttc
     3601 tcaccatcag ggtatgccca ggcattcatc gccatgcgga tgtgctcatg tttgattttc
     3661 atgaatcatt tgcctcttga tgcttcgggt atgatcgttt tcgtcatttg gttgcttcat
     3721 cgacatattc tgcgaataac atgacgagcg tcgtaagtat gtccaatcaa catcaggacg
     3781 aagttcttca cacaggacac caccttttgt tgctcgttca atcgcaggac atctctcagc
     3841 aggtaactga cgtacacctt tgatccattg atttacgctt ggaggagata cacctaaaag
     3901 cctagccatt gctgattgcc caccgacaac agcacaagct cgtttgaatg aatagttatc
     3961 ttttttcatc gaatgaactc caaaaaacac gcaacaatat taggcttagc ctaatgaaat
     4021 tgtcaatagg ctatgcctaa tacatcgaga gtagggattg cctaacgcga tgcgcatagg
     4081 agactattaa gcaatgctta gtggtaaaga cttaggccga gcgatagagc aggccattaa
     4141 caaaaaaatt gcatcaggag ccgtcaaatc aaaggcggaa atcgcacgtc atttcaaagt
     4201 ccaaccacca tcaatccatg actggattaa gaaaggttcg ataagtaaag acaaacttcc
     4261 agaactatgg cgtttctttt ctgatgtggt tggtccagag cattgggggc ttaacgaata
     4321 ccccatacca accccatcca cttcagatac aaaaagtgaa cttttagaca taaacagcct
     4381 ttatcaagcc gcctctgatg aaaaaaaagc aattgtggct ttcatcttat ctggaaatgc
     4441 tacggagcct agttgggttg attatgacgt tcgcgcctac attgccgcaa tggaaatgaa
     4501 ggtagctaac tatctgaaaa atcaagaatc aaaacggaaa agccagaaca tcaccaagac
     4561 aggaacttaa acttatatgg tccgacggga aattcctagt tcccgttagt taactcctac
     4621 tacctctccc acaaaccatc acctattagg ttgcgcccaa attattaggc atagcctatt
     4681 gacaagtaat taggcatttc ctatagtttt cccataccaa cccatcccgt cccacacaat
     4741 acagggcaat acctcgagtt accaggcagt ggtcaggggt taagtagcca gcccgaggcg
     4801 taagaacatg acggcagggt tcaactttaa taactatgca gcaggttttt gttccgctac
     4861 cccggcgtta aggggaaatg aggtcagcat ggatactatc gagcttggca acagcgaatc
     4921 tctggtatgt ggcgtgttcc ccaaccagga cggtacgttc accgcgatga cgtataccag
     4981 aagcaaaacg tttaaaactg aagctggcgc gcgtcgctgg ttaaccagaa acactgactg
     5041 atgaggttga cgatggaatt taaagattta ccagtaccat tccaggaaat ggcatcgaat
     5101 gtggttcgct ctcaactggc gactcttgac ctgagtaccg tagaaaaaga aaccatcgac
     5161 aatatatccg gtaacgtacg ccgagccttt atcgggctgt acgaagagaa gcagctctct
     5221 gataaccagg atttacatga aaaatacttc ctggatctaa tggacatcat tgataagggg
     5281 tttggcttgt taatgaaaaa gaaagggatt cgaatagaac cccttgaaaa ttactttgca
     5341 acaaaaagca ttaattcttt tgattcaaaa taagagaatt aattacagac ttaacatgct
     5401 ctttctcatg attgaagctc tcatgattga aagtgccggg ttgaagcgag tcgatataat
     5461 caacaagact ctgtcgtacg acttcatttt tatccataac agatgcaaga aatgaaattg
     5521 ctaaaagagt tatatcacta cgcgccgcag catgttgcaa tgctttatca aaattattaa
     5581 tctggcgtat cagggagtta atgatttcat cattttcagt cgacatttca ccctcctgag
     5641 ggttggtgat taaggagttc tccacgggtg aggtggagtg cgtgcgccgg acacgggtga
     5701 gcatccggca ctgacagttt actgaaagga tatttccctg aaaagtcaga ccataacgcg
     5761 aaagcgcccg gcgaggtagc tggttcatag atagcctgtc gttaaatttt cgtcgaccgt
     5821 gcgtttccgg ttgtggcaat ccgcgaaatg gcgcggcggt aagtatggcg gggttattcc
     5881 ttccccgttg aggacaccga gttgtcaggt tgaccatacg cttaagtgac aaccccgctg
     5941 caacgccctc tgttatcaat tttctggtga cgtttggcgg tatcagtttt actccgtgac
     6001 tgctctgccg ccctttttaa agtgaatttt gtgatgtggt gaatgcggct gagcgcacgc
     6061 ggaacagtta aaaccaaaaa cagtgttatg ggtggattct ctgtatccgg cgttaattgt
     6121 taactggtta acgtcacctg gaggcaccag gcaccgcatc acaaaattca ttgttgagga
     6181 cgcgataatg gaaacgttat taccaaacat taatacgtct gaaggttgtt ttgaaattgg
     6241 tgtcactatc agtaaccctg tatttactga agatgccatt aacaagagaa aacacgaacg
     6301 ggagctatta aataaaatat gcattctttc aatgctggcc cgtttacgtc cgatacaaaa
     6361 aggatgctgg caatgaatac agcatttgca cttgttctga cagtttttct tgtttccgga
     6421 gagccagttg atattgcagt cagtgttcac aggacaatgc aggagtgtgt gactgcagca
     6481 accgaacaga aaattcccgg taactgttac ccggtcgata aagttattca ccaggataat
     6541 aacgaaatcc cggcaggtct ttaaaacagt tccgtaataa atatccggtt tcattcttat
     6601 atgccagcaa tggcagggat ttgttcaccc ttaaatctgt aatgaggtaa aacaaaatga
     6661 gtaaagtctt tatttgcgcc gccattccgg acgaacaggc aataaaggaa gaaggtgccg
     6721 tcgctgtagc cactgccatt gaagccggtg atgaacgtcg cgcccgcgca aaatttcact
     6781 ggcaattcct ggaacattat ccggctgctc aggactgcgc ttataaattt cttgtctgcg
     6841 aggataaacc cggtataccc cgccctgccc tcgattcctg ggatgctgaa tatatgcagg
     6901 aaaaccgctg ggatgaggag tctgcttcct ttgtcccggt tgagactgaa tcagatccga
     6961 tgaacgtcac ttttgacaag ctggcccctg aagtacagaa cgctgtcatg gttaagttcg
     7021 acacatgtga aaacatcacc gttgatatgg ttattagcgc acaggaattg ttgcaggaag
     7081 acatggcaac attcgacgga catatcgttg aagcgttgat gaaaatgcca gaagttaacg
     7141 ccatgtatcc ggagcttaag ctgcatgcca tcgggtgggt taagcataaa tgtaagcctg
     7201 gtgccaaatg gcccgaaatt caggcagaga tgcgcatctg gaaaaaacgt cgcgaaggtg
     7261 aacgcaagga aaccggaaaa tacacgtctg ttgttgatct cgcccgcgcc agaaccaatc
     7321 aacagcacag tgaaaattca acaggaaaaa tcagcccggt cattgctgcc attcatcgcg
     7381 aatacaagca gacatggaaa acactggatg acgaactggc ctacgctctc tggcctggtg
     7441 atgtggatgc cggaaacatt gacggcagca tccatcgctg ggcaaaaaat gaagttatcg
     7501 acaacgaccg cgaagactgg aagcgtatct cggcatcaat gcgcaaacag cctgatgccc
     7561 ttcgctacga ccgccagact atttttggcc ttgtccgtga acgtccgatc gacattcaca
     7621 aagaccctgt ggcactgaac aaatacatta ctgaatacct gactacaaag ggcgtgtttg
     7681 aagatgaagg aagaaatcag agcgcaactg atactctctc gtcgccagta ccagaaactg
     7741 atgcagtgga aacggcaatt ccgggcaacg aaaaaaccga atgcaaagtg gaagtcgaac
     7801 catctgtaga gcgtgagggg ccgttctact tcctcttcac cgacaaggat ggcgaaaaat
     7861 acggtcgcgc aaacaaactt tctggtctgg aaaaagcact agccttggga gctacggaaa
     7921 tcacaaaaga ggaatacttc gcacgtaaaa acggcacgta ctcaggttca caacaaaata
     7981 ctggtgcatc tgacacgacc gcacaaccag agccggtaaa agttaccgct gacgaagtaa
     8041 acaaaattat gcaggcagcc aatatcagcc agcctgacgc cgataagttg cttgctgcct
     8101 ctcgcggaga atttgttgca gggattagcg acccgaatga tccgaaatgg gtaaagggga
     8161 ttgaaacccg cgattctgta aaccagaacc agcaagaatc ggaacagaac gaccagaaag
     8221 cggaacaaaa cagcccaaat acgcaacaaa acgagccaga aacgaaacaa cctgagccag
     8281 tagcgcaaca ggaaccggaa aaagtctgca ccgcctgcgg tcaaagcggt ggcggcaact
     8341 gccctgattg tggcgcggtg atgggtgacg caacatacca ggaaacattc gatgaagaga
     8401 atcaggttga agttcaggaa aatgatccga aggaaatgga aggcgctgaa catccacaca
     8461 aggagaatgc tggtagcgct caggatcacg ccagcgatag tgaaactggc gagacggcag
     8521 atcccttaat tgcgatgaac ggtcatcacg ttatcacatc caccagcagg acgtgtgacc
     8581 atctaatgat cgaccttgaa accatgggaa aaaatcctga tgccccgatt atctcaatag
     8641 gtgcaatatt tttcgatccg caaaccggag atatgggacc ggaatttagt aagactatcg
     8701 atctggaaac tgctggcgga gtcattgatc gtgacgtcat taaaaggtgg ctgaagcaat
     8761 cacgtgaagc gcagtctgcc attatgaccg atgaaatccc gttagatgat gcactgttac
     8821 aattgcggga atttatcgac gaaaactccg gtgaattttt tgttcaggtc tggggaaatg
     8881 gagccaactt cgacaacacg attttgcgcc gttcatacga acggcagggg atcccctgcc
     8941 cgtggcgtta ctacaacgat cgcgatgtac gcacaatcgt tgagctgggg aaagccatag
     9001 acttcgatgc cagaacggct attccattcg aaggtgagcg ccataatgca cttgatgacg
     9061 cccgttacca ggcaaaatac atttcagtta tctggcaaaa actgatcccg aatcaggctg
     9121 atttttaatg ttcaaccccg gtcgttgccc accagctata gtggcggcga ccatgattag
     9181 cgaacgacgc tcatggcaag acttattctg ctcactgagt gggcaaaaga ggaattcagt
     9241 gaaccggtcc ctactccgag tacgttaagt aaatacgcta aagccggaat gatatttcct
     9301 ctccccaaaa aagttggaag acgctggcga gtggatccgc aagctcgctt tgtcggaatg
     9361 gtaaacaagc cggaggtgat cgccacagat caccctgctt tgaagaggat actggaagat
     9421 ggcgcgcccg cgaaaatata aaaccgatgt tccgggatta tctccgtatt ttgacaaaag
     9481 aaataacaaa gtttactggc gttacaggca tcccataaca ggcaaaaatc acggtctcgg
     9541 cagtattgac cagaaactgg cagaaactat tgcagcagaa gcgaacagcc gtcttgcccg
     9601 gcagcaaatg gaacaaatgc tcagtctgca ggagaaaatt attagtgata ccggcggttc
     9661 atcaactgtt accatttttc tgaataatta cagaaaaatt caacaggaaa gatatgaaaa
     9721 cggcgagatc aaactcaaca cgctgaaaca gaaagcggcc cctctcaggg tatttgatga
     9781 acgttttggc accagacggt tagatgccat aaccgtaaaa gatgtggtat cagtactgga
     9841 agagtacaag gccagaggac ataacagaat gggacaaatt ttcaggaaag tactgatcga
     9901 tgttttccgg gaagctcagc aaacgggcga tgtcccgcca ggctttaacc ctgcagaatc
     9961 ggcaaaaaaa ccgcaggtgc ggatatcaag acagcgactg acttttgatg agtggatgat
    10021 gatttataac gcagcggaaa aggatggtta ctttttacag cgcggtatgc tgctggcact
    10081 gatgacaggc cagcgccttt cagatatttg caaaatgcaa ttttcggata tccgggatgg
    10141 ttatcttcat gtcgaacagc aaaaaacagg aacccggatt gccatccctc tggctctgcg
    10201 ttgcgataaa ttaaatctca ccctggatga tgtggtgtca tcctgccgcg attgcgttct
    10261 tagtccgtgg ctattgcacc accatcacgc gaaagggaca gctaagcgcg gcgggatggt
    10321 taagccagca acattaaccg ttgcatttaa aaaagcccgg gattctgtgg attacaactg
    10381 gcgtgctaat ggcacccctc cctctttcca tgagcagaga tctttatcag agcgattgtt
    10441 cagagagcag ggggttgata ccaaaatttt gctaggccat tcgaatcaaa aaatgaccga
    10501 tatttacaac gacgcacgcg gtaaggaatg gaaaaaactg gtcatttgat gaccagtttt
    10561 gcagaggggt tttgcagagg ttttgcagag aaaattaaaa acgatatcct gcggagaaca
    10621 taaacaccca cggatccagt cgtaccgagt cttttacggt agtaacacca gatttgtact
    10681 tagccgtggt atcgatatcc atgtaccaga ctgacatgtt aaccaaccag tcacggttaa
    10741 tcagataatc aacccccacc tgcccggcag ctccccagga atctttcaga ctgagatcgg
    10801 aaagccctgc ctctttgcca tgatcgttaa atccattatc aaagaaggtg gtgtagttaa
    10861 tacctgcccc aacgtaagga cggaatttgc tgctggcatc accaaaatac cactgcgcca
    10921 tcagtgttgg cggcagatgg tgaacggttg caatatcgcc ggtcgcccgg gtgccgattt
    10981 tatggcggaa cggcgtcgct gccagtaatt ccacaccaat gttgtcggtc gccatataag
    11041 taaacgtcaa gcccagttga gtgttattgg tcacgctgaa tccacccaga cttcctaacg
    11101 taccaccagc accttctgtt ggacgtacgg ttgcagaacc tgcacgcata aaaaattcgc
    11161 ctgcttcatg cgcaaaggca ctgccagaga gaagagttgt tactgccaaa gccgccactg
    11221 ttaacttttt catatccgct ccgtcgttat ggttataaaa acgtgacgaa tatacctata
    11281 ttggagtaac aaatgatcct acatagatca cattacatat gataattcac cctttattga
    11341 tctggattaa tttagaagtt gcattgagaa tcctggttaa cgtgatttaa atcaattttt
    11401 aaatattttc gctacgcaaa tattaactcg atcgccactt gccgcggttt gcccacgcct
    11461 gaaggccagc aattacctcc gctttacaaa gatatgcttt tccatacaag acctgatgct
    11521 gccacccgag gcttaaccag ggtacaattg cccgctaatt aacacctgca taaaactcaa
    11581 ggagagtgca tgtctatcac ggcgcagtcc gtataccgtg acaccggaaa tttcttccgt
    11641 aatcaattta tgaccattct gttggtatcg ttgctatgtg cgtttatcac agtggtgtta
    11701 gggcatgttt tctcacccag tgatgcacag cttgcgcagc tcaatgacgg cgtgcccgtt
    11761 agcggcagta gtgggttgtt cgacctggtt cagaatatgt caccggaaca gcaacaaatt
    11821 ttgctgcagg cttcagcggc gtccactttt tcaggattaa tcggtaacgc cattctcgcc
    11881 ggaggcgtaa tattaattat ccagctggtg tctgcgggtc agagagtcag tgcgctgcga
    11941 gctattggtg ccagtgcacc gatattgcca aagttattta ttctgatttt tctgactacc
    12001 cttttagtac agattggcat catgctagtg gtcgttccgg gaattatcat ggccatttta
    12061 ctggccctgg caccggtgat gctggtacag gacaaaatgg gcatttttgc ctcgatgcgt
    12121 agcagtatgc ggctgacttg ggcgaatatg cgtctggtgg cacccgcagt actgagctgg
    12181 ttgctggcaa aaacactgtt gctgcttttt gcctcttctt ttgccgcatt aaccccggaa
    12241 attggtgccg tactggcgaa caccttgagc aacctgattt cagccgtatt gctcatctat
    12301 ctgttccgtc tgtatatgtt gattcgccaa taaccttaag catttgatta cggaatcgta
    12361 aaatgaagca gtttcttgat tttttaccgc tggttgtctt tttcgcgttt tacaagattt
    12421 atgacatcta tgcggctact gcggcgctga tcgtcgccac ggcgattgtg cttatctata
    12481 gctgggttcg ctttcgtaag gttgagaaga tggccctgat cacttttgtt ctggtggtcg
    12541 tcttcggtgg cttgacgctg ttcttccaca atgatgagtt tattaaatgg aaggttacag
    12601 tcatttatgc tctgtttgcg ggagccctgt tagtcagcca atgggtgatg aaaaagccgc
    12661 taattcagcg gatgctgggt aaagaactca cgctgccgca accggtatgg tcgaagctga
    12721 atctggcctg ggctgttttc tttatccttt gcggtctggc aaacatctac atcgcattct
    12781 ggctgccgca aaatatttgg gtcaacttta aagtctttgg actgaccgcc cttaccttaa
    12841 tcttcacatt gttaagcggt atctatatct accgccacat gccgcaggaa gataaatcct
    12901 aaccagactg ccagtccttc ggggctggcg ctgtatctcc tctgttctcc tcaggaaaat
    12961 catagtagca tcgcgcctgt gattttcctt ttaagtcggt tttaccatgt ctacaacaca
    13021 taacgtccct cagggcgatc ttgttttacg tactttagcc atgcccgccg ataccaatgc
    13081 caatggtgac atctttggtg gttggttaat gtcacaaatg gatattggcg gcgctattct
    13141 ggcgaaagaa attgcccacg gtcgcgtagt gaccgtgcgg gttgaaggaa tgactttctt
    13201 acggccggtt gcggtcggcg atgtggtgtg ctgctatgca cgctgtgtcc agaaagggac
    13261 gacatcggtc agcattaata ttgaagtgtg ggtgaaaaaa gtagcgtctg aaccaatcgg
    13321 gcaacgctat aaagcgacag aagcattatt taagtatgtc gcggttgatc ctgaaggaaa
    13381 acctcgcgcc ttacctgttg agtaatagtc aaaagcctcc ggtcggaggc ttttgacttt
    13441 ctgcttactg aatttcggtg gtgccgttaa ttttaaacag gatattcacc acaatcccac
    13501 tgcctggctt acccggctca taacgccatc tgcgcatcgc atttttcacc tcacgctcaa
    13561 acatgttcgc aggcttggct gagaggattt gtacgttatc cacgcgacca tccggcgtga
    13621 cgtcaaattt aactttaacc tgcccttcaa tgcgcaatgc ctgtgctcgt gccggatact
    13681 gcggctgatt acggcttaat gcgcgtggtc ctgaagccac actggtaacc ggcttgctgg
    13741 ttgcagccgt tgctgtactt gatgtcaggc gtgccagtgc cgtattttca aacggtgatg
    13801 ccggacgcga ctctacgggt ttgacatcgc gttttggctg ctcctgtacc tttttcaccg
    13861 gcttcggttt tggcttaggt ttcggcttcg gcttttcaat gaccaccggt gcttcttttg
    13921 gcggttcggg gatcggctca ggttccggtt ctggctctac caccggctcc ggtggcggct
    13981 gaacggcttg tggcggttcg agatcagcag gcgcaaccat cgtgacagaa attggctgcg
    14041 caggcgcagg tagttcaata acctgatgta ccgaggtata gagcagaccc gccacaacag
    14101 caccatgaat gcagaccgaa agtaacgtcg gccaggggaa gcggcgaggt aaatcaaggg
    14161 tcattgaagt cataatcatt tcagtagaaa aaccaagcct cgattttaaa tgcaaatagc
    14221 aatcatattc aataaggcaa gacgatcagg atcagtgaaa atgtcatttt tgccgtaatt
    14281 aaccttactt tatgcatggt cttaacaaag acatcatctt tccgttgcag atcttcgccc
    14341 tttcaaataa cgtactttac aactttcccg aacaaggagt tgtgcccgtg ttgtatgtta
    14401 tttacgctca agacaaagct gatagcctcg aaaaacgcct ttccgttcgt ccggcacatt
    14461 tagcacgttt acagttactg catgatgaag gtcgtttgtt gacagctggt ccaatgccag
    14521 cggtagacag taacgatcca ggggctgcgg gatttactgg ctcaaccgtt attgctgaat
    14581 ttgaatcgct ggaagcagct caggcctggg ccgatgctga cccgtacgta gcggcaggag
    14641 tctatgaaca cgtttcagtg aaaccattta agaaagtgtt ctgaatagag attcaatatt
    14701 taagggcacg gtttttgcaa ccgtgttctt gtttggcctt tccttatagc cggtcagtgc
    14761 attcaccacc acaagcagat aataacttta tctgtatttc tttatatgat gtgagcatat
    14821 tcaggaaaaa tgacctttcc tgaggtacag ttgctcgctc aaaacctttg attactgcgg
    14881 ataaagtcat ctactattgt ttaacacatt cacgcgctgc atgtatgttc agaaaatgtg
    14941 cacgctaaga taattaaaca aaattgtggt tacagaggta tcagtgagtc actgggctac
    15001 attcaaacaa acagcaacaa atttatgggt gaccctacgg cacgacattc tcgcgctggc
    15061 cgtcttttta aatggattgc ttatttttaa aacaatctat ggtatgtcgg tcaatttgct
    15121 agatattttc catatcaaag cattttcaga gttggatctt tccttgctgg caaacgcccc
    15181 actatttatg ctcggcgtct ttcttgtcct gaactccatt ggcttactgt tccgggcaaa
    15241 gctcgcatgg gcaatcagta tcattttgtt gttgatagcg ctaatttata ccctgcattt
    15301 ttatccctgg ttgaaattta gtattggatt ttgcattttt acgctggtgt ttttgctgat
    15361 actgcgcaaa gacttctccc acagtagcgc cgcagccggg acaatttttg catttattag
    15421 tttcacgaca ttactgtttt actcaaccta cggtgcgctt tatttaagcg aaggttttaa
    15481 tccgcgaata gaaagtttga tgaccgcgtt ctatttttcg atagaaacca tgtcaaccgt
    15541 cggctatggc gatattgtcc ctgtttctga atcagcacga ttgttcacta tttcggtcat
    15601 tatttccggt attaccgttt ttgccacatc tatgacctca atttttggtc cgcttatccg
    15661 cgggggattc aacaaacttg taaaaggaaa caatcataca atgcatcgta aagatcattt
    15721 tattgtttgc ggacattcga ttctcgccat caatacgatt ctgcaactga atcaacgcgg
    15781 acaaaacgta acggttatca gcaacttgcc tgaagatgat atcaagcaac ttgagcaacg
    15841 cttaggcgat aacgctgatg ttatccccgg tgacagtaat gacagttcag tattaaagaa
    15901 agcgggaatc gatcgttgcc tggccattct ggcgctgagt gataacgatg cagataacgc
    15961 gtttgttgta ctctcggcaa aagatatgag cagtgatgtc aaaacagttc tcgccgtcag
    16021 tgatagcaaa aacctgaata agattaagat ggtacatccg gatatcattc tctcaccgca
    16081 actgtttggc agcgaaattc tggcgcgagt tttaaatggt gaagagatta ataatgatat
    16141 gctcgtttca atgttgttga actccggtca tggcattttc agcgataacg atgaacaaga
    16201 aacgaaagct gacagtaaag aatcggcgca aaaatagagt ttaaagatgg aggagtaaac
    16261 ttattgggca ccgcaatggt gcccagtaca tttagatatt gtagatcgca aacaataacg
    16321 agttacgctg tttgtttaga atgcacttcc tgatgctgtg gatacgcata tttcggcgcg
    16381 attgcccctc aagccaacgc gatttacgtc ggctagcctg acgctgcatg cgccagcgcc
    16441 ccacttccgt tctactccgc ttcatgttaa ctactctatg caataacaga atggtcatta
    16501 tacccccgcc cccgacgctg accagtgctt ttcccgcgtt tttatttgcc agatgaatcc
    16561 atatgcgtaa actcataaca atgcgctttc aaaaggattt ctaatctatg acaaccgttt
    16621 atacgttggt gagttggttg gccattctgg gatactggtt gctcattgca ggcgtaactt
    16681 tacgcattct aatgaaacga cgcgcagttc cctccgcgat ggcctggctg ttgattattt
    16741 acattctgcc gttagtcgga attattgcct atcttgccgt tggcgagctc catttaggca
    16801 aacgccgcgc tgagcgcgcc agagcgatgt ggccttccac cgcaaaatgg cttaacgacc
    16861 ttaaagcctg taagcatatc ttcgccgaag aaaatagcag tgtcgctgcg ccattattca
    16921 agctttgcga gcgtcgtcag gggatcgctg gggtcaaagg gaatcagcta caactgatga
    16981 ccgagtcaga tgatgtgatg caggcgttaa tccgcgacat ccagctcgcg cgccataata
    17041 ttgagattgt gttttatatc tggcagcccg gcggcatggc ggaccaggtg gctgaatcat
    17101 taatggccgc tgcgcgacgc ggcattcatt gccgattgat gctcgactcc gccgggagtg
    17161 tggctttttt ccgcagcccg tggcccgagc taatgcgtaa tgccggtatt gaagtggtcg
    17221 aagccttaaa ggtcaatctg atgcgtgtgt ttttacgccg tatggacctg cgccaacatc
    17281 gcaagatgat catgatcgat aattacatcg cgtacaccgg cagcatgaat atggtcgatc
    17341 ctcgctactt caaacaagat gcgggcgtag ggcaatggat tgatctgatg gcgcgtatgg
    17401 aaggccccat cgccaccgcg atggggatta tttattcctg cgactgggag attgaaaccg
    17461 gaaaacgtat tctgccgcca ccaccagatg tcaatattat gccgtttgaa caggccagcg
    17521 gtcacaccat tcacacaatt gcttctggcc ccggctttcc ggaagatctc attcaccagg
    17581 cattattgac tgcggcttat tcggcgcgtg aatatttgat catgaccacg ccctactttg
    17641 tgccaagcga tgatttactt catgcgattt gcacggcggc acagcgcggg gtggatgtca
    17701 gtattatcct tccgcgaaaa aatgactcga tgctggtcgg ctgggccagt cgcgcattct
    17761 ttacggaact tcttgctgct ggggttaaaa tttatcagtt tgaaggcggg ttactgcata
    17821 ccaagagcgt gctggtcgat ggcgaactaa gtctggttgg caccgttaac cttgatatgc
    17881 gtagtctgtg gctgaatttc gagattaccc tggcaatcga cgataaaggt tttggtgcag
    17941 accttgccgc cgttcaggac gattatattt cgcgttcacg tctgctcgat gcccgtttat
    18001 ggctaaaacg tccattatgg caacgtgtcg ccgagcgact gttttacttc ttcagcccgt
    18061 tgctgtaaaa cgtctccaac agaggttaaa caggtagtga ctatggatat ggatctaaac
    18121 aatcgcctga ctgaagatga aacgcttgag caggcctacg atatttttct cgaactggct
    18181 gccgacaatc tcgacccagc tgatgttctg ctgttcaatc ttcagtttga agagcgcggc
    18241 ggcgcggagt tattcgatcc ggtggaagac tggcaggaac atgttgattt cgatttgaac
    18301 ccggactttt ttgccgaagt ggtgattggt ctggcggaca gtgaggatgg tgaaatcaac
    18361 gatgttttcg cccgcattct gttatgccgc gaaaaagatc acaaactttg ccatatcatc
    18421 tggcgggaat aaataatcgc tttcggcgtg aaaaagggct gacaactgtc agcccttatt
    18481 gtgtttaaag cggatcgact ttcaggcaag aaacggcgtg tctgaaactc ccttccagca
    18541 caggacgtgt tttggcgcac tccggaccgg caatcgggca acgggtacgg aaaacacaac
    18601 cggaaggcgg gttgatcggc gacggtaatt ccccttccag taactggatg gttttgttct
    18661 tctccagatc cggatcaggt atggggactg ccgacatcaa tgccctggtg taaggatgta
    18721 gtggattgtg gtagacctca tcataggtcc ccagttctac cgcatggccg agatacatca
    18781 ccaacacacg atcggaaatg tgttttacca cggccaggtc atgagcaata aaaattaatg
    18841 acaatcccat ctcacgttgc agctgctgga gcaggttgac cacctgcgcc tgaattgaca
    18901 cgtccagcgc cgacaccggc tcatcacaga taatcagctt cggttcaaga ataagagcac
    18961 gagcaatccc gatacgctgg cactgcccac cagagaactc atgcggatag cggttaatca
    19021 ggttaggcaa taacccgact ttcagcatca tcgccttcac gcgctcgcga acttcctgac
    19081 gtgacatttt cggatgataa gtacgcagtg gttcagcgat gatctcgccg atggtcatgc
    19141 gcgggtttag cgatgccaac ggatcctgga aaatcatctg aatatcactg cgaacggcac
    19201 gccattcatc gggcttaatg cccagcaact ctttacctaa ccaggcaaca tgaccgtcgg
    19261 tcgctttaac caggccaatg atggcgcgag caaaggtgga cttaccgcat cccgattccc
    19321 ctaccacacc taatgtttcc ccttcataca ggcgaagcgt gacaccatcg acggctttga
    19381 gcgttttcgg cggttgccag aaccactgtt tgccatcttt gatttcaaag tgcactttca
    19441 gatcggcgat ttcaaggagg acttttcttc cttcggttac agcattcata acagttcctc
    19501 caccggttta aagcaagcac acagacggcc aagcgtaaac tcttccagcg gcggtgcgct
    19561 actacaaatt tccatcgcat gcggacaacg tggctggaac gggcaacctt tcggtaatcg
    19621 cagcaggttt ggcggattac ccgggatggt caacattgtt tcaccttccg catcgagacg
    19681 cggcaccgcg ttgagcaaac cgatagaata aggatgaacg ggttgataaa agacatcgcg
    19741 cgcgttgcca tattccatcg tgcgcccggc gtacattacc agcactttgt cacagatccc
    19801 cgccaccacg ccaagatcgt gggtaatcat aatgatggcg gtattaaatt cccgtttcag
    19861 ttcatttaat agcgtcatga tctgcgcctg tacggtgacg tccagcgctg tagtgggttc
    19921 atccgcaatc agcagcttag gtcgacatag caatgccatc gcaatcataa ctcgctgacg
    19981 catgccgcca gaaaactcgt gcgggtacat tttcatgcgt ttacgtgctt ccggcatttt
    20041 taccgcatcg agcatccgca ccgactcttc aaacgcctca gctttgctca tgttcttatg
    20101 cagcatcagc acttccatca actgctcacc gacgcgcata tagggattca acgaagtcat
    20161 tgggtcctga aaaatcattg agatttgttc agcgcgcagt ttattgagtt catgctctgg
    20221 caaattgagg atttcacgcc cattgaaggt tgccgatccg ccaatacgtc cgttggcagc
    20281 caacaggccc atcaacgcaa atgcagtttg cgatttaccc gaaccagact cacctacaat
    20341 acccagcgtt tctccggcac gtagggaaaa attcaaatca ttgaccgtcg tgacgtcgcc
    20401 gtccggggta ctaaaggtga cacgcaaatc tttcacgttc agcagtgcgt cagcctgttg
    20461 ttgtgcgagc ggcacagttg cagtttcaat tacgctcatg gctgcactcc ttaacgatct
    20521 ttcgggtcga gggcatcacg caagccatcg ccgataaagt tgaaacaaaa cagcgtcacc
    20581 acgaggaatc ccgctgggaa caacaataac catggagaga cttccatcga gttcgcgcca
    20641 tcactcagca atgcacccca gctgcttaac ggctcttgcg tacccaaccc caggaagcta
    20701 aggaaagatt caaagaggat catgctgggc accagaagtg atgcgtagac caccaccaca
    20761 ccgagtacat tcggcacaat gtggcgaata acaatgcccg atgtcgatac accgccaact
    20821 tgtgccgcct caataaactc tttgcgcttc agactcaggg tttgcccacg cacaatacga
    20881 gccatatcca gccaggaaac catgcctatc gccacgaaaa tcagcaggat gttttgaccg
    20941 aaaaaggtca ccagcaaaat gacgaagaac atgaatggga aggagttgag gatttccagc
    21001 agacgcatca ttaccgaatc cactttaccg cccagataac cggaaagcga accataaagt
    21061 gtcccgacga ccacagccac cagtgccgca gcaacaccga ccatgagtga gatacgccca
    21121 ccaatcgcaa cgcgcacaag caggtcgcga ccggatgagt cagtaccaaa gtagtgaccg
    21181 gactccatat ccggggcgct ggacatcatc gcccagtcag tatcgtcata ggcaaactgg
    21241 gaaagcatcg gtgccaggat tacaaataac gcgatcagca ccagcaccat cagactggca
    21301 accgccgcac ggttatgaat aaaacgtcga cgtgcgtcct gccacaagct gcgcccttcg
    21361 acctccagct tttcactgaa attttccagc gtctcgctgt ttttcttact taacatcatc
    21421 gcgagctcca gtatcagtaa cggattttcg ggtcgataac cgcatatagc acatcgacaa
    21481 tggcattaaa caaaatggtt aaagcaccaa ccaggatggt caggcttaac actaaggaat
    21541 agtcacggtt caatgcgcca ttaacgaaca gttgtccaat ccccggcaaa ccataaatgg
    21601 tttcgataac catagaaccg gtaataatgc cgacaaatgc ggggcccata taagagagca
    21661 cgggtaacag agcaggtttt aatgcgtgac gtaaaatgat ccgccgcata ggtaaccctt
    21721 tcgcccgggc agtacgaata aaattggagt gtaatacttc aatcatagag ccacgggtaa
    21781 tacgcgcaat actggcgata taagcgagtg acaacgccac catcggcaat atcatgaatt
    21841 taagcgcccc accattccag ccaccgcccg gcagccaatg caaaatgatc gcaaatatca
    21901 tgactaataa tggtgcaacc acaaaactgg ggataacaac cccggtcatt gccagcccca
    21961 tcacggtata gtcccatttg gtgttttgtt ttaatgcggc aataacgcca gcactaacac
    22021 ccagtattac cgcaaggaaa aatgctgcgg ctcccagttt ggcagaaacg ggaaaactgg
    22081 atgcaaccaa gtcattgacc gaataatctt tatatttaaa cgatggaccg aaatcaccgt
    22141 gcgccagttg tttcaggtag ctgaaatact gtgtcatgat cggatcatta agatgatatt
    22201 tcgcttcgat attggccatc acttctggcg gtaaagtacg ttcgccggta aaagggcttc
    22261 ccggcgcgag gcgcatcata aagaacgaaa tagtaataag aataaatagc gtcggaatcg
    22321 cttccagaca gcgacgtaga ataaatttta acattgccct accttctggc ctgtgccttc
    22381 tgtaatgcga taaaaatcag acaccgtgga gcaggacact cctgccccac gtattgccat
    22441 tagtgcttca caatgtacat attccgggta taggtattat ccagcggatc tttgccggta
    22501 tagccaccaa cccacggttt caccagacgc gcattcacgt agtaataaac aggaacaatg
    22561 gccgaatcct tatccagctg ttgttctgct ttagtgtaca gagctgtgcg ctgcgcctcg
    22621 tcagtcactt tcagcgtttc cgccataatg ctgtcaaagg ccgggctctt ataatgcgcg
    22681 gtattcatcg agctgttcga aagcatggtg ttcaggaagg aagttggttc gttgtagtca
    22741 gcacaccagc ctgcacgggc cacatcaaaa gtaccctggt gacgggtgtc gaggaacgtt
    22801 ttccactcct ggttaaccag tttgacgttt acaccaatgt ttttcttcca caatgaagag
    22861 gcagcaatcg ccagcttttt atgcagatcg gaggtgttat acaacaggtt gattgtcaac
    22921 ggtttgtctg cggtataacc cgcttcagcc agcagttttt tcgcttcttc gttacgtttt
    22981 tcctggctcc agccaaacca ttccggctga gtcaattttg cgccatcagt atacggtgga
    23041 gtgtaaccat aggcgggcat gtcgccctgc gctttcactt tattaacaat gatatcgcgg
    23101 tccataccta gtttcagtgc ggtacgcaca cgcacatcgt tgaatggcgg tttctggttg
    23161 ttaatttcgt aatagtaagt gcacaggtat ggatcaacgt gaacttcgtc cgggatctct
    23221 tttttcagct tctggaacaa ttcgatcggc atgttgttat aagtcatgtc gatttcacca
    23281 ctacggtagc ggttgacatc ggtaacttca gaagcaatag gcaaataggt tacctggtta
    23341 ataacggttt tcgcgttgtt ccagtaggtc gggctgcgtt caagaacgat tcgttcgttt
    23401 acgacccaat cttttaaggt ataggcaccg ttggtgacga tattaccagg ctgggtccat
    23461 ttttcgccga atttctcgat agcggctttt ggcaccggtg aagttgatgg gtgaacaagt
    23521 aatttataga agtacggaac gggttcactt aaggtgactt ctaatgtgtg atcatcaata
    23581 gctttcacac cgagatcggt aatcggtttt ttcccttcaa gaatttcatc aataccggcg
    23641 atatgcccat attgcagata actggcatac ggagaagcag tgttcggatc aacagaacgt
    23701 tgccagctat acacaaagtc ttgtgctgtg actggcgtac catcagacca tttcgcatct
    23761 ttacgcaaat ggaaggtcca gactttcgcg tctttattat cccaggattc agcgacgcca
    23821 ggtgccggat gaccgtcaag atcgctgacc agtaagcctt caaacaggtc tcggctgata
    23881 ttagactccg gaacaccttc aattttgtgc ggatctaatg actgaacttc tgaaccattg
    23941 ttacgtacca gcgtttgttt ttccgccagt gtgacgcctg cgggtacatc agctgccagc
    24001 gcgacattcc ctgccattag cgcagccaga acgccagctg ctactaaact tctcttggtg
    24061 atgttggtca ttgttttttg gactccctca ttataattac tggtattaac cagcatgtgt
    24121 aatcccggat tgggaccctg cacaggctcg gagactttct gctgtcaggt tactttatcg
    24181 ttacggattg ctatcaccga ctttatttat tctggtgatt cagacgatca ccttatgtcg
    24241 attcgtactg tgtctcccct gtcgagacac attattcttt cgcgacgctc tttaattgtt
    24301 aattgttaat tattctcatt accaataaag aatcgtctgg cggttgcccg gaaagtacta
    24361 aatgcggttc ttactcgcca atacattttg caaaattgtt aagcaattct cttttattga
    24421 ccgtatcaga atctatagct tgcatccatg ccttaacaaa catctttcaa ttcaatcaaa
    24481 tagagattgg ctaagcatgt ctatcttttc tgattacagt ttcagtattg aaatgcacaa
    24541 taatttaaca attgattatt atttagcact ttcctctacc aaaggcagtg gaattactaa
    24601 tatcatttca attattcttc agcaagccca ggattatgat gtggcgaaaa taacatgatg
    24661 gtgaggagaa gcagttaaga aaatccttat aactaactgt aatttgagaa gaatattttt
    24721 acctattcct tttgcttttg ataact
//
LOCUS       DADKRT010000047        24652 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.047, whole genome shotgun sequence.
ACCESSION   DADKRT010000047 DADKRT010000000
VERSION     DADKRT010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24652
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.047"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..421
                     /gene="speG"
                     /locus_tag="JQ356_001611"
     CDS             <1..421
                     /gene="speG"
                     /locus_tag="JQ356_001611"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HAY4621745.1"
                     /translation="TTSHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIIS
                     PEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFTVEGELMHE
                     FFINGQYRNAIRMCIFQHQYLAEHKTPGQTLLKPTAQ"
     gene            complement(424..1134)
                     /locus_tag="JQ356_001612"
     CDS             complement(424..1134)
                     /locus_tag="JQ356_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HAY4621746.1"
                     /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRG
                     PVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAET
                     LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS
                     NDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG
                     VKPAVERVYTIKNTIDYY"
     gene            1242..1547
                     /locus_tag="JQ356_001613"
     CDS             1242..1547
                     /locus_tag="JQ356_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
                     /protein_id="HAY4621747.1"
                     /translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE
                     SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSANVSAPAQSTQDGAPAEPQ"
     gene            1746..2339
                     /locus_tag="JQ356_001614"
     CDS             1746..2339
                     /locus_tag="JQ356_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005113419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HAY4621748.1"
                     /translation="MSKNDRMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRSAAATV
                     QQASEKVIWGACSVNCGSRCALRLHVKDNEVIWVETDNTGSDEYGNHQVRACLRGRSI
                     RRRINHPDRLNYPMKRVGKRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYS
                     SGIVGGNMTRSSPSASAVKRLMNCYGGSLTLPDLFWG"
     gene            2294..2422
                     /locus_tag="JQ356_001615"
                     /pseudo
     CDS             2294..2422
                     /locus_tag="JQ356_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310323.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
     gene            2465..3079
                     /gene="dmsD"
                     /locus_tag="JQ356_001616"
     CDS             2465..3079
                     /gene="dmsD"
                     /locus_tag="JQ356_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707489.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HAY4621749.1"
                     /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
                     QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMREKGIQFEMKQYEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
                     RFLDVFIEKAEHPFYRALGELSRLTLAQWQSQLLIPVAVKPLFR"
     gene            3238..4530
                     /gene="clcB"
                     /locus_tag="JQ356_001617"
     CDS             3238..4530
                     /gene="clcB"
                     /locus_tag="JQ356_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HAY4621750.1"
                     /translation="MHHLHIYPDLRTMFRRLLIATVVGILAAFAVAGFRHAMLLLEWL
                     FLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQ
                     TDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWI
                     ACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDAL
                     LYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGG
                     LIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVF
                     TPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTEMATLLAATTHAPIMSTLMICEM
                     TGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
     gene            complement(4483..5178)
                     /gene="bioD"
                     /locus_tag="JQ356_001618"
     CDS             complement(4483..5178)
                     /gene="bioD"
                     /locus_tag="JQ356_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY4621751.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS
                     KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
                     TDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
                     MLRSVLAVDRVTV"
     gene            complement(5303..6523)
                     /gene="mlc"
                     /locus_tag="JQ356_001619"
                     /gene_synonym="dgsA"
     CDS             complement(5303..6523)
                     /gene="mlc"
                     /locus_tag="JQ356_001619"
                     /gene_synonym="dgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor Mlc"
                     /protein_id="HAY4621752.1"
                     /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
                     DLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
                     NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNLGCLETIASVDSILE
                     LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPIISDSIRQQALPTYSQHISVESTQFSNQGTMAGAALVKD
                     AMYNGSLLIRLLHG"
     gene            complement(6658..7551)
                     /locus_tag="JQ356_001620"
     CDS             complement(6658..7551)
                     /locus_tag="JQ356_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4621753.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
                     IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
                     APFIRAVSDTLSLFRRDYPGVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
                     AVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL
                     TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRAQLNEMRWVPIAEEDAVSEMWLVWP
                     KHHEQSPASRNFRIHLLNALR"
     gene            7658..8910
                     /locus_tag="JQ356_001621"
                     /pseudo
     CDS             7658..8910
                     /locus_tag="JQ356_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416113.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            9307..9621
                     /locus_tag="JQ356_001622"
     CDS             9307..9621
                     /locus_tag="JQ356_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416114.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid shock protein"
                     /protein_id="HAY4621754.1"
                     /translation="MKKQIEGMTMKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKT
                     THHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQP
                     AA"
     gene            9714..9797
                     /locus_tag="JQ356_001623"
     CDS             9714..9797
                     /locus_tag="JQ356_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621755.1"
                     /translation="MVGRYRFEFILIILILCALIAARFYLS"
     gene            9897..10718
                     /locus_tag="JQ356_001624"
     CDS             9897..10718
                     /locus_tag="JQ356_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HAY4621756.1"
                     /translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
                     VPVNDTAQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVVLRF
                     VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
                     LPLFEGDKAALTAALKSAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
                     LPGDSGSPLMLHTNDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
     gene            complement(10757..11086)
                     /gene="mdtI"
                     /locus_tag="JQ356_001625"
     CDS             complement(10757..11086)
                     /gene="mdtI"
                     /locus_tag="JQ356_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HAY4621757.1"
                     /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
                     VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
                     MIMVKLA"
     gene            complement(11073..11438)
                     /gene="mdtJ"
                     /locus_tag="JQ356_001626"
     CDS             complement(11073..11438)
                     /gene="mdtJ"
                     /locus_tag="JQ356_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HAY4621758.1"
                     /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
                     YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI
                     KSGTRKARKPELEVNHGAV"
     gene            11850..12884
                     /gene="tqsA"
                     /locus_tag="JQ356_001627"
     CDS             11850..12884
                     /gene="tqsA"
                     /locus_tag="JQ356_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2 transporter TqsA"
                     /protein_id="HAY4621759.1"
                     /translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA
                     VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM
                     TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLF
                     MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL
                     DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG
                     NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI
                     AVLLSDLNKE"
     gene            complement(12909..14297)
                     /gene="pntB"
                     /locus_tag="JQ356_001628"
     CDS             complement(12909..14297)
                     /gene="pntB"
                     /locus_tag="JQ356_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HAY4621760.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LIATIFGPDTGNVGWILLAMVIGGAMGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
                     HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPKSPIAGMPVLEVWKAQDVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
                     AKASVDAILKAL"
     gene            complement(14308..15840)
                     /gene="pntA"
                     /locus_tag="JQ356_001629"
     CDS             complement(14308..15840)
                     /gene="pntA"
                     /locus_tag="JQ356_001629"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HAY4621761.1"
                     /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS
                     FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM
                     QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK
                     TGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNITVDFDDVVIRRVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE
                     EKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALH
                     TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR
                     KN"
     gene            16364..17308
                     /locus_tag="JQ356_001630"
     CDS             16364..17308
                     /locus_tag="JQ356_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY4621762.1"
                     /translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
                     RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR
                     VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA
                     NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
                     SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
                     VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK"
     gene            17494..18876
                     /locus_tag="JQ356_001631"
     CDS             17494..18876
                     /locus_tag="JQ356_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY4621763.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
                     ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLVLGVPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
                     MGPWGEIIIAASLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
                     SVPATWMLVG"
     gene            18913..19635
                     /gene="folM"
                     /locus_tag="JQ356_001632"
     CDS             18913..19635
                     /gene="folM"
                     /locus_tag="JQ356_001632"
                     /EC_number="1.5.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydromonapterin reductase"
                     /protein_id="HAY4621764.1"
                     /translation="MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
                     DGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKLGAPLADVL
                     ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD
                     NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
                     YLLTSCFVTGRSFPLDGGRHLR"
     gene            complement(19632..19944)
                     /locus_tag="JQ356_001633"
                     /pseudo
     CDS             complement(19632..19944)
                     /locus_tag="JQ356_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310340.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
     gene            20070..20789
                     /gene="rstA"
                     /locus_tag="JQ356_001634"
     CDS             20070..20789
                     /gene="rstA"
                     /locus_tag="JQ356_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
                     /protein_id="HAY4621765.1"
                     /translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE
                     NPDLVLLDIMLPGKDGITICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT
                     MPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEI
                     SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRNVDVAISRLRKKLLDNAA
                     EPYRIKTVRNKGYLFAPHAWE"
     gene            20780..22114
                     /gene="rstB"
                     /locus_tag="JQ356_001635"
     CDS             20780..22114
                     /gene="rstB"
                     /locus_tag="JQ356_001635"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000512930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HAY4621766.1"
                     /translation="MGISDEKTVYPVLPVIVCLLPLLFVCFLVMSLLVGLVYKFTAER
                     AGKQSLDDLMNSSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDIS
                     MHRLRGGEIVALDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISL
                     AFPVFIWMRPHWQDMLKLEAAAQRFGDGHLYERIHFDEGSSFERLGIAFNQMADNINA
                     LIASKKQLIDGIAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTY
                     ARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERV
                     LDNLLNNALRYCHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRD
                     RSTGGCGLGLAIVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA"
     gene            22190..23119
                     /gene="tus"
                     /locus_tag="JQ356_001636"
     CDS             22190..23119
                     /gene="tus"
                     /locus_tag="JQ356_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HAY4621767.1"
                     /translation="MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEV
                     KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRSLT
                     VLHDPATLRFGWANKHIIKNLHCDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
                     IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE
                     LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
     gene            complement(23116..24519)
                     /gene="fumC"
                     /locus_tag="JQ356_001637"
     CDS             complement(23116..24519)
                     /gene="fumC"
                     /locus_tag="JQ356_001637"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HAY4621768.1"
                     /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
                     IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
                     NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
                     IPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
                     LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
                     MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE
                     PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
                     DSWVRPEQMVGSMKAGR"
BASE COUNT         5947 a         6346 c         6023 g         6336 t
ORIGIN      
        1 gaccacttca catattcacg atcagagcga acgacgcttt gtggtggaat gtgacggcga
       61 aaaagccggt ctggtggagc tggtggaaat taaccatgta catcgccggg cagaatttca
      121 gataattatc tccccggagt atcaggggaa aggtctggca acccgtgccg ccaaattagc
      181 aatggactat ggcttcaccg ttctcaatct ctataagctg tatctgatcg tcgataaaga
      241 gaatgaaaaa gcgattcaca tttaccgcaa gcttggcttt acggttgaag gtgaattgat
      301 gcatgagttt tttattaatg gtcaatatcg taatgccatt cgcatgtgta tattccagca
      361 tcagtatctg gcagagcaca aaacaccggg tcagactctc ctgaagccga ccgcacaata
      421 gcattaataa taatcgatcg tatttttgat ggtgtaaacc cgttcgacgg cgggttttac
      481 tccttcatca acaatgatca gctgacagtc caccggattg gcgtgactgt catattcaca
      541 gctctgtttt acattaccaa ctcgttgatt attcagtaaa gtaaccgctg tgtaatctaa
      601 ttttttgatc gggtccgttg atggcgtggc gctgacagat aatgttttgt cgttactttt
      661 cgtggtttta cccagtggat aaccctgatc atcatagcga tattccatct gcatttgttt
      721 gctgctggct ttaatcacga agccattatc atcggtttcc caactcaccc cggcagaagg
      781 taattctgct agctggcatt ttccctgtaa acgtactctc ttctccagcg tctcggcatc
      841 acggtaataa ttggcgtcca gtaccagagc gaccacggta ttattttcca gatccagtaa
      901 ttcgagtgaa tcaaaacagc cttcttccga caaagtccca gaaacacgtt tcgtcacttc
      961 accttgctca tccattaatg tctgagtgaa atcttttacc ggaccacgca gcggatcaaa
     1021 atcgaattca ttagagaaac tggccatctc aggggtaaat gaaagtgtta cctctgtgcg
     1081 gtcacatcct gtgaggaata tcgcgagtaa gcatggtagt aatttgtatt tcacaacagt
     1141 caccagagag tagagatgat tctcaatcat agtagcaaat acagtacttt acacgttaaa
     1201 tgctatgctt aaagaagtta tcttcgcgta aggagcttat gatgaaactc tcaacctgct
     1261 gtgccgcgct tctgctcgcc ctcgcctcac ccgcggtact cgccgcgccg ggatcctgtg
     1321 agcgcataca gagcgatata tcacagcgca ttatcaataa tggcgtaccc gaaagcagct
     1381 tcacattaag tattgtaccc aatgaccagg ttgatcagcc tgattcccag gtcgtcgggc
     1441 attgtgctaa tgatacgcat aaaattctct acacccgcac caccagcgct aacgtctctg
     1501 ctcccgcgca gtctacccag gatggcgcgc ctgccgaacc gcagtaatac attatcgact
     1561 gaacgccgga tatgacacat ccggcgattt gaacatacaa cataatccca ccttattact
     1621 catacccttc tattgatgtg gattaataat tcttaaccca aaatgggtag accccctcta
     1681 ttgttagcgc gctaaatatt caatacataa acatttatat aacgataaag aacagggagt
     1741 gagttatgtc caaaaatgac cgaatggtgg gcatcagccg cagaacactc gttaaatcaa
     1801 ccgcgatagg ttctctggcg ctggctgcag gcggtttttc tttaccgttc accctgcgca
     1861 gtgcagcggc aacggtacaa caggccagcg aaaaagtgat ctggggtgcc tgttccgtca
     1921 actgtggtag ccgctgtgca cttcgtctac atgttaaaga taatgaagtg atctgggtgg
     1981 aaactgacaa taccggcagc gatgagtacg gcaaccatca ggtacgcgcc tgtttgcgcg
     2041 gtcgctccat ccgccggcgt attaatcatc ccgatcgctt gaattaccca atgaaacgcg
     2101 tgggtaaacg cggtgaaggc aaattcgaac ggattagctg ggatgaagcc ctggatacta
     2161 tcgccagtag cctgaaaaaa accgtcgaac aatatggcaa tgaggctgta tatattcagt
     2221 actcttcggg gattgttggc ggcaatatga cccgctcttc gccatcagcc tcggcggtca
     2281 aacgcctgat gaactgctac ggcggttccc tcacgttgcc ggacttattc tggggctaat
     2341 cctcatactt ggcggtgaga tgatcgggcg tgtgctcttt tatggcctgc acatgacagt
     2401 aggaatggct attgcaggtt aacaaattgg tgcggggcaa cccgcacatt tcaggatgtt
     2461 aggaatgacc catttttcac agcaagataa tttttctgtc gcggcgcgcg tgttgggcgc
     2521 gctgttttat tacgctccag agagtgcgga agccgcacct ctggttgcgg tactcaccag
     2581 tgacggctgg gaaactcagt ggcctctacc agaagcgtca ttagcgccgc tggtgacggc
     2641 ttttcagaca cagtgtgaag agactcacgc ccaggcctgg cagcgtttgt ttgtcggccc
     2701 gtgggcactg ccgtctccgc cgtgggggtc ggtctggctg gatcgcgaat ctgtgctgtt
     2761 tggcgattca acattggcac ttcgtcagtg gatgcgcgag aaaggcattc agtttgaaat
     2821 gaagcaatac gaaccggaag atcattttgg ttcactgctg ttgatggctg cgtggttggc
     2881 ggagaatggt cgccagacag aatgcgaaga attgctggca tggcaccttt ttccgtggtc
     2941 aacacgtttt cttgatgttt ttatcgaaaa agcagaacac cctttctacc gtgcactggg
     3001 tgaactgtct cgcttaacgc tggcgcaatg gcaatcacaa ctgttaattc ctgtcgcggt
     3061 taaaccgctg tttcgatagg atcaccgtaa tattgccgga tggtgacgat tacgcgcaat
     3121 ccggcaataa taggttacag tgtcacgttt ttttatctct taaagcacgc actgcttttg
     3181 cggctggcct cttttgccgc aaaatagtcg cccgtgtttc attgcccatt tctgctcatg
     3241 catcatctac acatctatcc ggatctgcgc actatgttcc gccgtctgct tatcgcaaca
     3301 gtcgtcggta ttctcgcggc ctttgccgtt gccgggtttc gtcatgcgat gctgctactg
     3361 gagtggttgt tcctcaataa tgactccggc agtctggtca atgcagcgac aaacctttcc
     3421 ccctggcgac ggttgctaac tccggcgctc ggcggactgg cggcgggttt gttgctgatg
     3481 ggctggcaga aatttaccca acaacgccct catgcgccga ccgattacat ggaagcgttg
     3541 caaaccgatg gacagttcga ttacgcagca agcctggtta aatcgcttgc ctcgctgctg
     3601 gtagtaacca gcggcagtgc aattggtcgc gaaggtgcga tgattctttt agctgccctt
     3661 gccgcctcct gttttgccca acgttttacg ccacgccagg agtggaaatt atggatcgcc
     3721 tgtggcgccg cggcgggaat ggctgcggcc tatcgtgccc cgcttgctgg cagtttattt
     3781 atagccgaag tgctgtttgg cactatgatg ttggcctctc tcggcccggt gattatttcc
     3841 gccgtcgtgg cattgctggt tagcaatctg attaatcata gcgacgcgtt actctacaac
     3901 gtacaactct cagtgacggt tcaggctcgt gactatgcgc tgattatcag tacaggtgtg
     3961 ctggcaggtc tgtgcggacc actgttgtta acgttaatga acgcctgtca tcgtggattt
     4021 gtgagtctca aacttgcgcc gccctggcaa ctggcactag gcgggttgat cgtgggtctg
     4081 ctttccctgt tcacacctgc agtgtggggc aacggctata gcaccgtaca atccttttta
     4141 accgccccac cactgttaat gatcattgcc gggatcttcc tttgtaaact gtgtgccgtg
     4201 ctggcgagta gcggttccgg cgcacccggt ggtgtcttta caccgacgct atttatcggt
     4261 cttgccattg gcatgttgta tggtcgtagc ctgggattat ggttccctga tggcgaagaa
     4321 attacgcttt tactcggatt gaccgagatg gcgacactgt tggcggcaac cacgcacgcg
     4381 ccgattatgt cgacgttgat gatatgtgaa atgaccgggg agtatcagct actccccggt
     4441 ttattgattg cctgcgtcat tgcgtcggta atttcgcgga cgttacaccg tgactctatc
     4501 taccgccagc acactgcgca gcatagctaa gcggatgtat tgccccagtt ctcgctgttc
     4561 ggcgcgcggc agataaggca gttcaccaat gagcggtgcc ggaagttttt tacccagcac
     4621 atcaatgatt tccgcataat gcgccagtcc tgggttgatt cggttagcca cccagccaat
     4681 gagcggcagc ccgtcgttgg caatcgcctg agctgttagc agtgcatggt taatgcaacc
     4741 ttcctgaata ccgacaacca tcaacaccgg caactgttcc tgcaccaccc attcagagag
     4801 tggacgcaaa tcattcatca gactgcgcca gccgccagtc ccttctacca cgacatgatc
     4861 gactttatcg gtcaggtttg ccaggccgtt tgaaatgagg gtgtaattga ttgggcaact
     4921 gtgcgccacg ctactttctt cttcgcttaa cgcgatagga ttaactgctt cataaggtag
     4981 ttcgatggtt gaaacactct gcaacaccag ggcatcttta ttacgcagcc cttcgggtgt
     5041 ctctttgctc cccttcgcta cgggtttata tcccgcaact gtttttccct gggaggctaa
     5101 cgcttgtagc aatgcgcggg aaaccaccgt tttccctaca gaagtgtctg taccggtaat
     5161 aaagaaacgc ttcagcatca ctaactccac cgttatgctt cacaaatata aactaggaaa
     5221 ataattaacc ttgaaagtct aagttatgct ttcctggccc aaattgagat agcgcaaatt
     5281 ttggtagaac agttaaaaaa tgttaaccat gcaacagacg aatcaacaaa gaaccgttat
     5341 acatcgcgtc ttttaccagc gcagcgcctg ccatcgtgcc ctggttagaa aactgagtac
     5401 tctcaacgct aatgtgctga ctatacgtag gaagggcctg ctgacgtatg ctgtccgaga
     5461 tgatagggaa gaggatatct gccgctttac ttaacggtga gccaatcagt attttttgtg
     5521 ggttaaataa attcaccatg atggcaagaa tgcgcccgac atgcgcgccc accccggtaa
     5581 tgatgtcttt tgccagtaga tcgccgcgca atgccgcctg acacaatgag tccacggtta
     5641 acggttgccc atgtaacatc gagctcatgg attgattgag acgcagctgt gccagctcaa
     5701 gaatactgtc cacactggcg atggtttcga ggcagccgag gttcccgcaa taacagcgtt
     5761 taccatatgg gtcgacctgt gtgtggccta tttccacgag actactgctg cctgcgtgta
     5821 gcagatgacc atcggtaatg acgcccgccc ccacgttgtg atcgataacc acctgaatca
     5881 catcgcgcgc cccgcgtgag gcaccaaaca aggcctctgc catcgtccat gcgctgatat
     5941 catgctgaat ataaaccggt acgccggtat gctgctccag cgcctcgccg agcggcatct
     6001 cttttacatc ctcgtagaac ggcatgcgat gtacaatacc attttccgta tcaataattc
     6061 ccggcagggt tatggcaatc gaagttagac gctcaagttt tttctggtgg cggataaaaa
     6121 actgatcgat atgggaaatg atacgatcca gcaatggcaa gtcatctttt aacgccagtt
     6181 cctgcgactc ttccaccacc agtttgctgc tcagatcgcg cagagcaagg aaaatctcac
     6241 cgcgactaat gcgcagagaa agatagtgcc aggcttcagt ttcaaccacc agtcccaccg
     6301 ccggacggcc acggttcccc gcttctttga tttccagctc ttgcaccaag tgtgcttcga
     6361 gcatctcacg gacaatttta gtgatactgg caggagccag ctgcgccaga cgggaaagat
     6421 cgatacgcga gactggacca agctgatcaa tcaggcgata aaccgcgccc gcgttggtct
     6481 gctttatttg atcaatgtgc ccaggctggt tttcagcaac caccgcatac tccctatatt
     6541 ttcgcgctcc gaaataatct gtaggctatg gtgaagcact tcaatacgtg tcgtcaaatt
     6601 tttacttaga catgtgatta acagcacatt tttcgggctt tttcgctgaa atttccctca
     6661 cctgagagca ttcagcagat gaatacgaaa gttacgcgaa gctggacttt gttcatgatg
     6721 tttcggccag accaaccaca tttcagaaac cgcatcctct tcagcaatcg gcacccagcg
     6781 catttcgttg agctgagcac gtttaaatga agcaggcaaa attgaaacac ccagaccggc
     6841 ggaaaccaga ccgatgatgg tcattgcctc gcccacctcc tgagtgatga cgggcgtcaa
     6901 atggtaacgt cgcatcagcc cgagaatatc gtcatacagc cctgtcccga cgtgcggatc
     6961 aaaaaagacg aagggttctt tcgccagttc agccaacgtt acattcgggt tatttgccag
     7021 gggatgatcg tgcgggatca tcgccataag cggttcatgg acgatgactg cgtgttcaag
     7081 cgtctccggt aacgctgtgt tacgcagcaa tcccatatcc agcgttcctt caatgagcgg
     7141 agcgatttgc tcacgagtgt tcatttcgcg ggtttgtaaa tggacaccgg gataatcacg
     7201 gcgaaacagc gataacgtat cggacaccgc ccgaataaaa ggagcggacg aagtaaaacc
     7261 aatgcgcaac tcccccgctt caccctgatg cagtctttca gcgcgagcgg cagcgtcatc
     7321 taccatagac aggatttgcc gactatctgc aagaaactgt tttcctgctg ccgtcagcaa
     7381 tacactgcga ttagttcgtg ccagcagtcg ggcaccaatt tgttgctcca gtgcctgaat
     7441 ctgctgactt agcggtggtt gcgaaatatt caggcgggca gcggcgcgcc cgaaatgcag
     7501 ctcttccgca acagcaacaa agtaacgcag atgacgaagt tcaatattca tatttaaaac
     7561 atcttatttg agattattaa tatattagac agaacaattc gattttccta acctatgtat
     7621 aagcctgatc cacaggcata tttagcaagg atttcaagtg agccgtacta caactgttga
     7681 tggcgctccg gcaagcgaca ctgacaagca aagcatttct cagccaaatc aatttattaa
     7741 acgcggtacg ccgcaattta tgcgcgtcac cctggcgctg ttctctgccg gactggcaac
     7801 ctttgcactc ctctattgtg tgcagcctat ccttccggtg ctttcgcagg agtttggctt
     7861 aacccccgcg aacagtagta tttcactgtc catttccacg gcgatgttgg ctattggttt
     7921 gctgtttact ggccccctat ccgatgccat tggtcgcaaa ccagtgatgg tcacggcgct
     7981 actgttggcc tcaatttgta cgttatttcg acaatgatga ccagctggca cggcattttg
     8041 attatgcgcg ccttgattgg gctttcgtta agtggcgtgg cagctgttgg catgacttat
     8101 cttagcgagg aaatccaccc cagtttcgtg gccttttcga tggggttgta tatcagcggc
     8161 aactcaattg gcggcatgag cggacgctta attagtggtg tcttcacgga ctttttcaac
     8221 tggcgaattg ctctggcggc aatcggttgt ttcgcgctag cctcggcgtt gatgttctgg
     8281 aaaatccttc cggaatcacg ccattttcgc ccgacttcgc tgcgacctaa gacgttgttt
     8341 atcaactttc gtctgcactg gcgtgaccgg ggattaccgt tattgttcgc agaaggcttt
     8401 ttgctgatgg ggtcgttcgt cacgctgttt aattacatcg gctatcggtt gatgctttcc
     8461 ccctggcatg tcagtcaggc cgtggttggc ttattatcgc tggcttattt gaccggtaca
     8521 cggagctcac ccaaagccgg aaccatgacc acccgctacg ggcgcggtcc ggtgatgttg
     8581 ttttcgacgg gggttatgct gtttggttta ctgatgacct tattcagctc gctgtggctg
     8641 atctttgccg gaatgttact cttctcagca ggattcttcg cagcccactc agttgccagc
     8701 agctggatcg gcccccgcgc aaaacgcgct aaaggccagg cctcctcgct gtatctgttc
     8761 agttactatc tgggatcgag tattgccggg acgctgggtg atgttttctg gcataactat
     8821 ggctggaacg gcgtcggcgc atttattgct ctgatgctgg tcattgctct gctggtcggg
     8881 acgcgtttgc atcgtcgtct gcacgcctga aaaataagcc cggactgcgg taactacacg
     8941 tccggactta ttgcttgctc aaaccaacgt taatagccat cctaaaatag acgaagcgcc
     9001 agccaattcc cgcagtgcgt ctagcgtcat caggattata agtacccaaa taaacggatt
     9061 cattttgctg tgtgtcattt attactgatg cgcagttatt ctaccgcttt gtaagtagta
     9121 aaatagttaa cccgatcaag actactatta ttggtagcta aatttccctt aagtcacaat
     9181 acgttattat caatgctgta atttattcag cgtttgtaca tatcgttaca cgctgaaacc
     9241 aaccactcac ggaagtctgc cattcccagg gatatagtta tttcaacggc cccgcagtgg
     9301 ggttaaatga aaaaacaaat tgagggtatg acaatgaaaa aagtattagc tctggttgtt
     9361 gccgctgcta tgggtctgtc ttctgccgcc tttgctgcag agactgcgac gaccaccaaa
     9421 gcagcgccgg cgaaaacgac acatcataaa aaacagcata aagcagcacc tgcccagaaa
     9481 gcgcaggcag ctaaaaagca tcataaaaat acgaaagctg aacagaaagc ccctgaacaa
     9541 aaagcgcagg cagcgaagaa acacgccggg aaacacagtc atcagcaacc ggcaaaacct
     9601 gctgcacaac ccgcagcgta agttttcaac agtaatgctg gcgcgccccc tcgcgcctga
     9661 aaattacggt gctaagcggg taacgtttag caccgccttt agcggagggt agtatggtgg
     9721 gccgttatcg ctttgagttc attcttatca tccttatttt atgcgcactg attgccgccc
     9781 gtttttatct ttcctgactg tagttatctg attttactcc cactttcatc ccgtcccgtc
     9841 tatagtattt atgagggttt gcttttaata atcataatta cccaccagag tgtgatatgc
     9901 gtacaaccat tgctgtagtg ttgggtgcaa ttagtttgac gtctgctttt gtgtttgcag
     9961 ataaaccaga cgttgccaaa tcggcaaacg atgaggtcag caccctgttt tttggtcatg
    10021 atgatcgtgt gccagtgaat gacacggccc aatcaccgtg ggatgcggtt gggcaactgg
    10081 aaacggccag cggcaattta tgtacggcga cgctgattgc acccaatctg gcattaacgg
    10141 caggacactg tttattgaca cctccaaagg gtaaagccga taaagcagtg gtgctgcgtt
    10201 ttgtgtcaaa taaaggtctt tggcgctatg agatccacga catagaaggc cgcgttgatc
    10261 cgacactggg aaagcggtta aaagcagatg gggatggttg gattgtacct cccgcagccg
    10321 cgccgtggga cttcggattg attgtgctac gtaatccccc ttctggcatt acaccgttgc
    10381 cgttatttga gggagataaa gccgcgctta ctgccgcatt aaaatcggct ggccgtaaag
    10441 taactcaggc gggataccct gaagatcatc tcgatacgtt gtacagtcat caaaactgtg
    10501 aagtgactgg ctgggcgcaa acgtcggtga tgtcacatca gtgcgatacc ttgccgggtg
    10561 acagcggttc gcctctgatg ttgcatacca atgacggctg gcaattaatt ggggtgcaaa
    10621 gttcggctcc tgccgcgaaa gatcgctggc gcgccgataa ccgggccatt tctgttaccg
    10681 gttttcgcga caagctggat caactgtcgc aaaaataatg ttcaaacgct gcccgactgt
    10741 gcgggcagcg tgttcatcag gcaagtttca ccatgatcat tccagccaac agcaagacca
    10801 ggccaatcca gcctttacga tttaaccgtt gaccaaacaa gatccaacct gcggctaacg
    10861 tggcggcaat accaaacccg ccccacaatg cataagcgac agacaagtcg atccctttaa
    10921 cggcctgaga aagcgcacta aaggcagcca gcaccgccgc cagggagagc aagccaaata
    10981 ttttgcgacg aaagccgtca gaaaatttca aaaagacgtt agcaacgatt tccagcacga
    11041 ttgccaatgc cagccaggcg gcgtgaaccc attcaaactg cgccatggtt tacctccagt
    11101 tcaggtttac gcgctttacg ggtacctgat tttatcaaca caatcccggc gaccagggtg
    11161 gttaacccgg caattttcat cagcgataaa ctttcgtcga ataacaaaac gctaaacaag
    11221 gtaataaata aaataccgat accttcccac aacgcataag ctacgcctaa ggcgatcttt
    11281 ttaacggcga aagagagaaa tatatacgac agagaaatca tcaccagcat taaaataaag
    11341 ccgccatttc cctcactgac gctcgcccat ttcattgaca gcgtaccggt aatttctgta
    11401 gcaatagcca ggcctaataa aatccaataa atatacattg tccttctcct gcaagagaat
    11461 tattttaatt ttcgcttaat tcagcgaaat caaagtaaag tggtcaagcc ccgcgcatag
    11521 ggcaagctta ggcagaagaa aggactaaag cgcgttgcgc cagtgctgct cacctacgag
    11581 caagatagtg gatgaggtac aaagatgggt aaatgttgaa aataaggtcc tgaacaaatt
    11641 gtccataata ttacaattat ccgcagtgtt gcttctcgtc atcgcggatg ataattgtcc
    11701 tcggtagttg aacacgcctg atttgtatca tagcttaaga attaactcaa aatattttca
    11761 cttctttacc tgagcggttt gattttcgtt atgatgacgg agcgaaaaag acattattat
    11821 tagcaaagga agaaaaaacg gggacaagca tggcaaagcc gatcatcacg ctcaatggcc
    11881 taaaaatcgt cattatgttg ggaatgctgg tcattattct ctgcggtatc cgttttgccg
    11941 ccgagatcat cgtgccgttt attctcgcat tatttattgc tgttattctt aacccgctgg
    12001 tgcaacacat ggtccgctgg cgagtgccgc gtgtactggc ggtgtcgatt ttgatgacca
    12061 tcatcgtgat ggcgatggtg ttgctattag cttatctggg ttccgcgctc aacgagttga
    12121 cgcggacgtt accgcaatat cgcaactcta ttatgacgcc gctgcaagct cttgagccgt
    12181 tgttgcaacg cgtagggatt gacgtctcag ttgaccagct ggcgcattac attgatccga
    12241 acgcagcgat gacgttgctc accaacttat tgacgcagtt atctaatgcc atgtcatcaa
    12301 tatttttatt gctgctgacg gtgctgttta tgctgctcga agtgccacaa ttgcccggaa
    12361 aatttcagca aatgatggcg cgtccggttg aagggatggc ggcgattcaa cgtgcaattg
    12421 acagtgtttc tcattatctg gtgctgaaaa cagccatcag catcatcacc ggcctggtcg
    12481 cctgggcgat gctcgccgca ctcgatgttc gcttcgcttt tgtctgggga ttgctggcct
    12541 ttgcgcttaa ttacatccct aatattggtt cagttctcgc ggcaatcccc cctatcgctc
    12601 aggtactggt gtttaatggc ttctacgaag cgttgctggt gctggcggga tatctgctga
    12661 ttaatctggt cttcggcaat attctggagc cgcgcatcat gggacgtggg ctggggcttt
    12721 ccacattggt ggtatttttg tcgttgattt tttggggatg gttgttagga ccggtgggta
    12781 tgctgctttc cgtgccgtta acaattattg tcaaaattgc gcttgaacaa acagcgggag
    12841 gtcaaagcat cgccgttctg ttaagcgatc tcaataaaga gtgacggcct ccgcagaggc
    12901 cgtcagggtt acagagcttt caggattgca tccacgctgg ctttggcgtc accaaacagc
    12961 atgtgggtgt tttccttgaa gaacagcggg ttttgcacac cagcatagcc agtgttcatc
    13021 gaacgtttaa agacaatcac gtcctgcgct ttccacactt ccagcacagg cataccagca
    13081 ataggactct tcggatcatc ctgcgccgcc gggttaaccg tatcgttagc accaatcacc
    13141 agtacggtat cggtatcagc aaagtcatcg ttgatctcgt ccatttccag cacgatgtca
    13201 tacggtactt ttgcttcagc cagcaatacg ttcatatgtc caggcaaacg ccccgcaacc
    13261 gggtggatac cgaaacgcac gttgatacca cgagcgcgca gtttctcggt aatttcagcg
    13321 acaggatatt gcgcctgcgc gactgccatg ccgtaccccg gagtaatgat cactgaatgg
    13381 gagtttttca gcagttccgc tgtctcttct gcggtgattt cgcggtgctc gcccacttcc
    13441 tgatcatcgc cagtagaaga gccgtcggtg ccgaaaccac ccgcaataac gctgataaag
    13501 gaacggttca tcgccttaca cataatgtaa gaaaggatag cccccgaaga accgaccagc
    13561 gcaccggtca caatcagcag gtcgttgctg agcataaagc ccgcagccgc agccgcccag
    13621 ccggagtacg agttcagcat cgacaccacc actggcatat ctgcaccacc gatggaggcg
    13681 actaaatgcc agccgaatac cagcgcaatg gcggtcatta ttagcaatgc cagcacttgc
    13741 aggccgacgc tgtccgtgcg aacaaataca atcagcagca ggaaggaaac gaccagagcc
    13801 gccaggttca ttttgtgacg gtttggcagc atcaacggtt tagacgaaat cttgccacac
    13861 agtttgccga acgccaccac cgaacccgtg aacgttaccg ccccgatgaa gataccgagg
    13921 aacacttccg tcaggtgaat attgaccaga atcggtgcca ttcccgcgtc atgatgcaga
    13981 tagctgttaa agccaaccag cactgccgcc agacccacga agctgtgcag gatcgccacc
    14041 agttctggca tttcggtcat ttcaactttc ttcgccagac ggatacccat tgccccacca
    14101 atgaccatcg ccagcaagat ccagccaaca ttacccgtat ccggtccaaa aatggttgcg
    14161 attaacgcaa tcgccatccc tgcgataccg aagttgttac cctggcgaga cgtttcatgt
    14221 ttcgaaagac cggccagact gaagataaac aggatcgcgg caacaatgta tgcagctgta
    14281 actaatcctc cagacatatg ttacccctta atttttgcgg aacattttca gcatgcgctg
    14341 agtcacggtg aagccaccga aaatattaat gctggctata agcaccgcga taaaactaag
    14401 gaagctaacc cagccgccct ggccaatctg caacagtgct ccgacaacaa taatccctga
    14461 aatcgcgttg gtgaccgaca tcaacggtgt atgcagcgcg tgcgatacat tccacaccac
    14521 gtaataaccg acaacgcagg ccagcgcgaa aacggtgaag tgcccaagaa actctttcgg
    14581 cgcaacgctt gccagccaac cgaaaaggat gattgccagc gccatcaacg cgtatttacg
    14641 ccacggtgag caggcacatt tttcctcagt tttcacttcc ggtgccgctt tttgtgccgc
    14701 ctgcggctga gctgatacct gaatcggcgg tgccggccag gtaatttcgc ccgcacggat
    14761 cacggtcacg cggcgaatca ccacatcatc aaaatcaaca gtgatattgc cgtctttctc
    14821 tttgcacaac agtttcagca gattaacgag gttagtaccg taaagctgcg aggattgcgt
    14881 cggcagacgg cccggaagat cggtataacc aatcactttg acaccatttt ccgtagtgaa
    14941 gatttcaccc ggcacggtgt attcacagtt gccaccgttt tgggctgcca ggtcgacaat
    15001 cacactgccc gtcttcatgg agtcaaccat ttcacgggta attagcttcg gcgctggttt
    15061 gcctggaata agcgcggtgg tgacaatgat atcgacctct tttgcctggg cggcaaagag
    15121 ttccatttct gctttaatga acgcgtccga catcactttg gcatagccat cgccgctgcc
    15181 cgcttcctct ttaaaatcca gctcgaggaa ttccgcgccc atactttgaa cttgttcttt
    15241 cacttccgga cgggtgtcga atgcacgcac aatcgcgccg agactgtttg ctgcgccaat
    15301 ggcggccaga cctgcaacac ccgcaccaat caccatcact tttgccggtg gcactttccc
    15361 ggccgcagta atttgcccgg taaagaagcg cccaaattca tgtgccgctt caacaatggc
    15421 gcgataaccg gcgatgttcg ccatcgagct tagtgcgtcc agcgattgtg cgcgtgagat
    15481 acgcggcaca gaatccatcg ccatcacggt cacgttacgt tccgcaagtt tttgcattaa
    15541 ttccggattc tgcgcaggcc agataaaact caccagcgtt gtcccaggat tcagtaacgc
    15601 aatttcatca tctaacggcg cattgacctt cagaatgatc tctgactgcc agacgctatt
    15661 cccttctaca atttcagcgc ccgcttgcac aaacgcttta tcgtcaaaac ttgccagttg
    15721 acccgcgccg ctctctaccg cgacggtaaa acccagtttc agcagctgtt ccactgtttt
    15781 tggcgttgct gcaacacggg tttcattggt taaccgttct cttggtatgc caattcgcat
    15841 gatattccct tccatcggtt ttattgatga tggtttgcct gtgtcaggag ccacacaagc
    15901 cgctcatgta cgagctaaat gttactccgt taaaataaat tagtaacaaa cgccctataa
    15961 cgtactgaaa attatgcctg tgatctagcg ccaaaaatca gtatttcggc gtgaactcgc
    16021 aaaatattaa cgattcagcc gtgatagtgg gataaacacc ttagaacgcc ggataaagac
    16081 tgataattgt cttcgacggt cgggtaaaac gagacatcgc cccggcacga ttcactactt
    16141 aacattaaat taacttatac aattcagttg cttcagtagt aatgatgctg atacggctgt
    16201 tttttaagca tagacggtca tttgagcagg attaaaattg gcttaaggaa tgtgatatga
    16261 aaaatgacgc agacagttac accgtttaaa tgcaataatc agccacgttt ctcgttaata
    16321 acaataccag tacctggttt gcgcaaggcg aaggattatt tttatgaagc ttaagaacac
    16381 cctcctggcg tcggcactgc tttctgctac ggcattctcc gttaacgcag caacagaact
    16441 gacaccggag caagcggcag cggttaaacc ttttgaccgt gtagtggtta ccggtcgttt
    16501 taatgctatt ggcgaagcgg tgaaagccgt ttctcgtcgc gcagataaag aaggtgccgc
    16561 ctctttttat gttgtcgaca cttctgattt tggtaacagc ggtaactggc gtgtggtcgc
    16621 tgacctctat aaagccgatg ctgaaaaagc agaagaaaca agtaatcgcg taattaacgg
    16681 tgttgtcgaa ctgccgaaag atcaggctgt tctgattgaa ccgtttgaca cggtcaccgt
    16741 ccagggcttc tatcgtagcc agccagaagt caatgatgcc atcaccaaag cggcaaaagc
    16801 gaaaggtgcc tactctttct acatcgttcg tcaaatcgat gccaaccagg gcggcaacca
    16861 gcgtattact gcattcatct ataaaaaaga tgctaagaaa cgtatcgtcc agagcccgga
    16921 tgtgatcccg gcagattccg aagcaggacg tgcagctctg gctgccggtg gcgaagccgc
    16981 gaagaaagtt gagatcccag gtgttgcgac taccgcatca ccaagttctg aagtcggtcg
    17041 tttctttgaa acccagtcat caaaaggcgg gcgttacacc gtcacgctcc cggatggcac
    17101 taaagtcgaa gaactgaaca aagcgaccgc agcgatgatg gtcccgttcg atagcatcaa
    17161 attctctggc aactacggca acatgaccga agtctcctat caggttgcga aacgtgccgc
    17221 gaagaaaggt gctaagtatt accacatcac ccgccagtgg caggaacgtg gtaataacct
    17281 gaccgtcagc gcagatctgt ataaataact attcagttac tcctataagg cggcttgatg
    17341 ccgcctttcg catttttagt cacaaatttc cccgcgacca ttgcatgcag acacatctct
    17401 tcgtaaaatc ccgcgcttca gtggcaaact ccatttttat gcgttttgcc ctaatattta
    17461 ttcttcttat cacgttttaa tcactggata tcgatggaaa agaaactggg actgagcgca
    17521 ctcaccgcgc tggtattaag ctcaatgctg ggcgcgggtg ttttcagtct gccgcaaaat
    17581 atggcggcag ttgccagccc ggcagcactg ctcatcggct ggggtattac tggcgctggc
    17641 attttattgc tggcctttgc catgctgatc ctcacgcgca ttcgtcccga acttgacggc
    17701 ggtatcttta cctatgcccg cgaagggttt ggcgagctaa tcggcttttg ttccgcatgg
    17761 ggatactggc tgtgcgcagt catcgccaac gtctcctatc tggtgatcgt tttttccgcg
    17821 ttaagctttt ttacggacac gccggaattg cgcctgttcg gcgatggtaa tacctggcaa
    17881 tcgatcgtcg gtgcatcggc tttattgtgg attgttcact ttttgatcct gcgcggggtg
    17941 caaaccgctg ccagcattaa cctggtggcg acactggcaa aattgttgcc gctgggtctg
    18001 tttgttgtgc tggcgatgat gatgttcaaa ctggatacct tcaagctcga cttcaccgga
    18061 cttgtacttg gcgtacccgt ttgggaacag gtgaaaaaca ccatgctgat caccctgtgg
    18121 gttttcattg gtgtggaagg tgccgtggtt gtttctgcgc gtgcgcgtaa taaacgtgat
    18181 gttggcaaag cgacactgct ggcggttctc tccgctctgg gcgtttactt gctggtaacg
    18241 ctgctttcgc tgggtgtggt ggcacgtcct gaactggctg aaattcgtaa cccgtcaatg
    18301 gccggtctga tggtggaaat gatgggacca tggggcgaaa tcatcatcgc tgccagtttg
    18361 atcgtttccg tttgcggcgc gtacttaagc tggaccatca tggcggcaga agttccgttc
    18421 ctggctgcca ctcataaagc attcccacgc atttttgcgc gccagaacgc acaagctgcg
    18481 ccatccgcct cactgtggtt gaccaacatc tgcgtgcaaa tttgtctggt actcatctgg
    18541 ctgaccggtt ccgattacaa cacgttgctg accatcgcct cagaaatgat tctggtgccc
    18601 tatttcctgg tcggcgcgtt cttgctgaaa atcgcaaccc gtccactgca taaagcggta
    18661 ggtgtcggtg cctgcattta tggcttatgg ttattgtacg cctctggtcc aatgcacttg
    18721 ctgttatccg ttgttctgta tgcgccgggg ctgctggttt tcctgtatgc gcgcaaaacg
    18781 catacacatg ataatgtact gaaccgtcag gaaatggtgc tgattggcat gctgttaatt
    18841 gcctcagttc cggcgacctg gatgctggtg ggataacgtt catcccatcg ttggatagca
    18901 aaggagataa cgatgggtaa agcccagccc ttgccaatat taattactgg cggaggtcgt
    18961 cgcatcggcc tcgccctcgc ctggcatttc attaatcaaa agcaaccggt gattgtcagc
    19021 tatcggacgc actatccagc cattgatgga ctgattaagg caggtgcgca gtgtattcag
    19081 gctgattttt cgaccaacga cggtgtgatg gcgtttgccg atgaagtact aaaaagcacc
    19141 catggtctgc gtgctatttt gcataacgcc agtgcgtgga tggcggaaaa actgggtgcg
    19201 ccactggccg acgtactggc ttgcatgatg cagatccacg ttaatacccc atacctgctc
    19261 aaccatgcgc tggaaagatt actgcgtggg cacggacacg ccgccagcga tatcattcac
    19321 tttaccgatt atgtggtgga gcgcggtagc gacaagcata ttgcgtatgc tgcaagcaaa
    19381 gcggcactgg ataatatgac ccgctcgttt gcccgcaagc tggcaccgga agtgaaagtg
    19441 aattctattg ctccatcgct gatcctgttt aatgaacatg atgatgccga atatcgacaa
    19501 caggcgctga ataaatcact gatgaaaacc gcgcctggcg agaaagaagt gatcgacctg
    19561 gtcgattact tacttaccag ttgctttgtc accggacgca gtttcccact tgatggcggt
    19621 cgtcatctgc gttaatgcag ctttatccag catataatca acacccatgc aacacgcaac
    19681 agaaccaaca aaagcggcgg gcaagcgcat cattccggtg aaataccaca gcgacaccag
    19741 gtaaacaaaa tagggaataa tcgaccacat actaaaaatg atggttgcgc gtaaggcttc
    19801 aatgccgcgt tcgctggcaa caatataatg cgcgataagc gcaaaggtcg ggaaaagtgg
    19861 aatcagcccg gcgatataat aatttttcgt ttttgctaaa acaccaatca acagcactac
    19921 cagcgcaccg agcgcggctt tgattttacc ttaacacttc cataacaagt catcagtaga
    19981 atacctgatg aaaacttgtt tagaaacgat tgatagtaag taaaaacagc gcggtgtatt
    20041 gtgacgtttt tatatctacc gtgaatgtta tgaacactat cgtatttgtg gaagatgatg
    20101 cggaagtcgg ttcactgatt gccgcgtacc tggcaaaaca tgatatgcag gttaccgtag
    20161 agccgcgcgg cgaccaggcc gaagaaacca ttttgcgaga aaatccggat ttggtgttac
    20221 tcgacatcat gctaccaggc aaggacggca ttaccatttg tcgtgattta cgcgcaaagt
    20281 ggtctggacc gattgttctt ctaacctctc tcgatagcga tatgaaccac atcctggcac
    20341 tggaaatggg tgcctgcgac tatattctca aaacgatgcc ccctgctgtt ttgctagcgc
    20401 gtttacgttt gcatttgcgt cagaatgagc aagccacact gaccaaaggt cttcaggaaa
    20461 cgtctctgac tccctacaaa gccctgcatt tcggcacgtt gaccatcgat cccatcaacc
    20521 gcgtagtcac cctggctaac actgaaatct cgctctcgac agctgatttc gaattattgt
    20581 gggaattagc tacccatgcc gggcaaatca tggaccgcga tgcattgctg aaaaatttac
    20641 gcggcgtcag ttatgacgga ctggatcgta acgtggacgt ggctatttcg cggttaagaa
    20701 aaaaactgct cgataacgcc gcagaacctt atcgcattaa aactgtgcgt aacaaaggct
    20761 atctttttgc gcctcatgca tgggaataag cgatgaaaaa actgtttatc cagttttacc
    20821 tgttattgtt tgtctgcttc ctttattgtt tgtctgcttc cttgtgatgt ctctgctggt
    20881 tgggttggtg tacaaattta ccgccgaacg cgcgggcaaa cagtcgctgg atgatttgat
    20941 gaacagttcg ctgtatctga tgcgcagcga attgcgtgag atccccccac acgactgggg
    21001 taagacgctg aaagagatgg atttaaatct ctctttcgat ctgcgtgtcg agccactgag
    21061 taaataccat cttgatgata tttccatgca ccgactgcgt ggcggcgaaa ttgtcgccct
    21121 ggacgatcag tacacgtttt tgcagcgtat cccgcgcagc cactacgtgc tggcagttgg
    21181 tcctgttcct tatctttatt atctccatca gatgcgattg ctggatatcg ccctgatcgc
    21241 ttttattgct atttccctcg cctttccggt gtttatctgg atgcgtccgc actggcagga
    21301 tatgttaaaa ctggaagcag cggcgcaacg atttggcgat gggcatctct atgagcgtat
    21361 ccactttgat gagggttcga gctttgaacg acttggtatc gcatttaacc agatggcgga
    21421 caatatcaac gccttgattg ccagcaaaaa acagcttatt gacggtatcg ctcacgaact
    21481 gcgaacaccg ttagtgcgcc tgcgttatcg actggagatg agcgataacc tgagcgccgc
    21541 cgagtcccag gcgttgaatc gtgatatcag tcaacttgaa gctttaattg aagagctgct
    21601 gacttatgcc cgactcgatc gcccacaaaa cgagcttcat cttagcgaac cagacctgcc
    21661 gttgtggctg tcaacgcatc tggcagatat tcaggcagta acgcccgata aaacggtacg
    21721 gataaaaacg ctcgtgcaag gccattatgc ggcgttggat atgcgcttaa tggagcgcgt
    21781 gctggataat ttgctcaata acgccctgcg gtactgccat tcaacggttg aaaccagcct
    21841 gctactgtcg gggaatagag cgacattaat tgttgaggat gatggcccag ggattgcccc
    21901 agaaaaccgc gaacatatct ttgaaccttt tgttcgcctc gatcccagcc gggatcgctc
    21961 aaccggcggc tgcgggctgg ggctggcaat tgtccactct atagcactgg caatgggcgg
    22021 tacggttaat tgtgacacca gcgaactggg tggtgctcgc ttctcgttta gctggccgtt
    22081 atggcataac atcccgcaat ttacctctgc ctgacactac gcgcacgatg gtcaagtcac
    22141 caccattgtg ctataaatta aggatgttgt aactaaagtg gttaatatta tggcgcgtta
    22201 cgatctcgta gaccgactca acactacctt tcgccagatg gaacaagagc tggctgcatt
    22261 tgccgctcat cttgagcaac acaagctatt ggttgcccgc gtgttctctt tgccggaggt
    22321 aaaaaaagag gatgagcata atccgcttaa tcgtattgag gtgaaacaac atctcggcaa
    22381 cgacgcgcag tcgctggcgt tgcgtcattt ccgccattta tttattcaac aacagtccga
    22441 aaatcgcagc agcaaagccg ctgtccgtct gcctggcgtg ttgtgttacc aggtcgataa
    22501 cctttcgcaa gcagcgttgg tcagtcatat tcagcacatc aataaactca agaccacgtt
    22561 cgagcatatc gtcacggttg agtcagaact ccccaccgcg gcacgttttg aatgggtgca
    22621 tcgtcatttg ccggggctga tcacccttaa tgcttaccgc tcgctcaccg ttctgcacga
    22681 ccccgccact ttacgttttg gctgggctaa taaacatatc attaaaaatt tgcattgtga
    22741 tgaagtcctg gcacagctgg aaaaaagcct gaaatcacca cgcagtgtcg caccgtggac
    22801 gcgcgaggag tggcaaagaa aactggagcg agagtatcag gatatcgctg ccctgccaca
    22861 gaacgcgaag ttaaaaatca aacgtccggt gaaggtgcag ccgattgccc gcgtctggta
    22921 caaaggagat caaaaacaag tgcaacacgc ctgccctaca ccgctgattg cactgattaa
    22981 tcgggataat ggtgcgggcg tgccggacgt tggtgagttg ttaaattacg atgccgacaa
    23041 tgtgcagcac cgttataaac ctcaggcgca gccgcttcgt ttgatcattc cacggctgca
    23101 cctgtatgtt gcagattaac gcccggcttt catactgccg accatctgtt ctggccgtac
    23161 ccagctgtca aactcggctt cgctaagata ccccagcgca agggccgcag cttttaaggt
    23221 cagcccttct ttatgcgctt ttttggcgat ctccgcggct ttgtcataac caatgtgggt
    23281 gttaagcgca gtcaccagca tcagcgattc attgagtaat tgattgattc gctcacgatt
    23341 cggttcaata cccactgcgc agtgtttgtt aaaactttcc atgccatctg ccagcaagcg
    23401 caccgattgc aggaaattat ggatcaccat cggacggaag acgttcagtt caaagttacc
    23461 ggaagcgcca cccatgttga tcgccacgtc gttccccatt acctgacagc agagcatggt
    23521 taatgcttca cactgggttg ggttcacttt ccccggcatg attgagctgc ccggctcatt
    23581 ttccgggatt gagatttcac caattccgca gcgcgggcca gaggccagcc agcggacatc
    23641 attggcgatt ttcatcagtg acgcagccaa ccctttcaac gcgccgtgcg cctgaaccag
    23701 ggcatcacag gtcgcaagcg cttcaaattt gttcggcgcg gtaacaaacg gtgcacaggt
    23761 aatgactgcc agttcatctg ctacgcgacg cgcatactcc ggatgggtat ttagtccagt
    23821 acccaccgct gtaccgccaa gagccagttc cgctacgtga ggcaggctgt attcgatatg
    23881 tttgagatta tgctcgagca tcgctaccca gccggaaatc tcctgcccta gtgttagcgg
    23941 cgtggcgtcc tgcaagtggg ttcgaccgat tttgacgata tcggcaaatg cacgcgattt
    24001 ttcactcagt gtctgcgtca gggttttaag ctgcggaatg agttgcttgc gcagcgccag
    24061 cagcgccgca acgtgcatcg ccgtcggaaa gacatcgttg gaactttggc ttttgttcac
    24121 gtcgtcgtta gggtgaactt tacgttccat cccgcgcacg ccgccgagta attcactggc
    24181 ccggttagcc agcacttcgt tcatgttcat gttactttgc gtgccggagc cggtctgcca
    24241 gatagccagc gggaattcgt cgtcatgctg tcctgccagt acttcatccg ccgcctgccg
    24301 aatggcgctc gctttctctt cagacaacaa gcctaaatct tcattaactt ttgccgctgc
    24361 gcgcttggtt agcgccagcg catgaatcag tgaggtgggc attttctccg tcgaaatgcg
    24421 gaaatgctcc agcgagcgtt gagtttgtgc gccccacagc ttatctgccg ggacatcaat
    24481 cgcccccatc gaatcttttt cgctgcgtac tgtattcatg gcctgctcct cacctgttta
    24541 attttttctt tctgttttgc tttcgctaag caacttttag ctcacttatt atttactatt
    24601 tgataacaag tgtttggtct ttcgtgccat gtaaaaaaac cgccccgaag gg
//
LOCUS       DADKRT010000048        24554 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.048, whole genome shotgun sequence.
ACCESSION   DADKRT010000048 DADKRT010000000
VERSION     DADKRT010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24554
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.048"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..90
                     /locus_tag="JQ356_001638"
     CDS             <1..90
                     /locus_tag="JQ356_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 domain-containing protein"
                     /protein_id="HAY4621769.1"
                     /translation="LPLINKEEQPDKGFLASISRGIMPSLPFL"
     gene            complement(146..3001)
                     /gene="valS"
                     /locus_tag="JQ356_001639"
     CDS             complement(146..3001)
                     /gene="valS"
                     /locus_tag="JQ356_001639"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HAY4621770.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVSL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQK
                     LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRN
                     EEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFN
                     QTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVL
                     PADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEG
                     FVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL"
     gene            complement(3001..3444)
                     /gene="holC"
                     /locus_tag="JQ356_001640"
     CDS             complement(3001..3444)
                     /gene="holC"
                     /locus_tag="JQ356_001640"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HAY4621771.1"
                     /translation="MKNATFYLLDNDTTVDGLSTVEQLVCEIAAERWRSGKRVLIACE
                     DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK"
     gene            complement(3604..5115)
                     /gene="pepA"
                     /locus_tag="JQ356_001641"
     CDS             complement(3604..5115)
                     /gene="pepA"
                     /locus_tag="JQ356_001641"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HAY4621772.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAILHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE"
     gene            5382..6482
                     /gene="lptF"
                     /locus_tag="JQ356_001642"
     CDS             5382..6482
                     /gene="lptF"
                     /locus_tag="JQ356_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HAY4621773.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAL
                     LRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTV
                     FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV
                     NLIYLALAIVLNLWDTVPVRRLRASFSRKGAV"
     gene            6482..7564
                     /gene="lptG"
                     /locus_tag="JQ356_001643"
     CDS             6482..7564
                     /gene="lptG"
                     /locus_tag="JQ356_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313266.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HAY4621774.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GSYDALGAGMYTLLSVPKDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIIGALLPSASFFLISLWLLMRKS"
     gene            complement(7725..9227)
                     /locus_tag="JQ356_001644"
     CDS             complement(7725..9227)
                     /locus_tag="JQ356_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HAY4621775.1"
                     /translation="MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLA
                     ESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFG
                     EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
                     IGDNAKSFQNQYGNISSASVGAIQRGLLSLEKQGAAHFFGEPMLDIKDWMRTDTNGKG
                     VINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
                     QVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAV
                     KAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTE
                     DERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTKQQNNPPAKGKAVAVDDGILG
                     GLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR"
     gene            complement(9357..10376)
                     /gene="ahr"
                     /locus_tag="JQ356_001645"
     CDS             complement(9357..10376)
                     /gene="ahr"
                     /locus_tag="JQ356_001645"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent aldehyde reductase Ahr"
                     /protein_id="HAY4621776.1"
                     /translation="MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSD
                     LSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDAC
                     ISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
                     LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVN
                     SRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLI
                     AGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVV
                     LKADF"
     gene            10572..10656
                     /locus_tag="JQ356_001646"
     tRNA            10572..10656
                     /locus_tag="JQ356_001646"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10606..10608,aa:Leu,seq:caa)
     gene            10820..12085
                     /locus_tag="JQ356_001647"
     CDS             10820..12085
                     /locus_tag="JQ356_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY4621777.1"
                     /translation="MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRR
                     PSDKKEDRLAFGVWPTVTLAQARAKRDQAKKLLAQGIDPKAEQKEAQAENSGAYSFET
                     IAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKH
                     DVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARL
                     AAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYR
                     GMKMKEEHIVQLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGY
                     DTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNNVRAAYIHTSEHLDERRL
                     MVQWWADYLQANKGKTITPYDFAKINKSR"
     gene            complement(12140..13150)
                     /locus_tag="JQ356_001648"
     CDS             complement(12140..13150)
                     /locus_tag="JQ356_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621778.1"
                     /translation="MIYITSESKETLMIKYEGKMKKNIRVIPKNIHSKLRRLGNTVVA
                     GTSIAFTENQLKSGALEHLGIYFDNGVNAYETSVIPDPLQGKYSLKNVFGEEIVRKDL
                     PKETHYTEIESPNWGDSSNGTHTVRLPYEKYPRDIIPPTLIAIEINHKQPSDSHFIFN
                     FRVTRILDKQSNKFDDELLFDLNLLQENLGKCGIEDADKPISTYADTLIVSWEIFPPG
                     SKEETLARIFRGKNITSDKKNVAENRYDFFMSLEPKKIVTGNSTFSNYIGAMLEDDLV
                     VFENIEYGNAIYILYDNWDDISKLSRIDLLSGRAGSNFDRIIHSGNWKDEVRKKVAAG
                     RL"
     gene            complement(13101..13637)
                     /locus_tag="JQ356_001649"
     CDS             complement(13101..13637)
                     /locus_tag="JQ356_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621779.1"
                     /translation="MLKAIAGIAKYTWIYMAIFIISLMIISSSDINYVYNDFANYCTL
                     LVSVSGMVFTIMGIWLAFLYPNALQRIVNPKTIETVDFTEQLEDTRRLEAIVGSVLKS
                     SFVMITLLVVYLVKLVFFKSHLYLESQDVIKNTSLALIIAISYMQIEAVISVILANVM
                     FINDLHNKREQRDIDDQV"
     gene            complement(13638..14717)
                     /locus_tag="JQ356_001650"
     CDS             complement(13638..14717)
                     /locus_tag="JQ356_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621780.1"
                     /translation="MNVGHLNFFKVNKCGLYKVNDDNTYGLELSETFDLIQDWVGTKS
                     LALTIPWDPKEKPNSSKCYCKDIYKDENTGDFLVMLWKSDTDSTGSLLGASEDGEIGS
                     SSVVKYTNSYRGKKVIWGRPCFYWVIPELETIVSIKFDHSVCDSELFQDYVHSSITNR
                     VKHSKRVKNKTEKGYIRLSNTDDEDLYKYMYRFDMKLRSLETTHTELGKLIPKITHIV
                     RRETIIINPNDARADWLKTFSTLVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKY
                     SAEDREKRLWDNVGFATDKGITWVDKYRMRDILNVPSDDYSTYSAAYIYEQISHKRKE
                     FISPILKELKALQSQPRIKKASGED"
     gene            complement(15115..15687)
                     /locus_tag="JQ356_001651"
     CDS             complement(15115..15687)
                     /locus_tag="JQ356_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Polarity suppression protein"
                     /protein_id="HAY4621781.1"
                     /translation="MESTALQQAFDTCQNNKAAWLQRKNELAAAEQEYLRLLSGEGRN
                     VSRLDELRNIIEVRKWQVNQAAGRYIRSHEAVQHISIRDRLNDFMQQHGTALAAALAP
                     ELMGYSELTAIARNCAIQRATDALREALLSWLAKGEKINYSAQDSDILTTIGFRPDAT
                     SVDDSREKFTPAQNMIFSRKSAQLASRQSV"
     gene            complement(15761..16261)
                     /locus_tag="JQ356_001652"
     CDS             complement(15761..16261)
                     /locus_tag="JQ356_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001405508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transactivation protein"
                     /protein_id="HAY4621782.1"
                     /translation="MIYCPSCGHVAHTRRAHFMDDGTKIMIAQCRNIYCSATFEASES
                     FFSDCKDSGMEYISGKQRYRDSLTSASGSMKRPKRMLVTGYCCRRCKGLALSRTSRRL
                     SQEVTERFYVCTDPGCGLVFKTLQTINRFIVRPVTPDELAESLHEKQELPPVRLKTQS
                     YSLRLE"
     gene            complement(16258..16992)
                     /locus_tag="JQ356_001653"
     CDS             complement(16258..16992)
                     /locus_tag="JQ356_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001600374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein 3"
                     /protein_id="HAY4621783.1"
                     /translation="MSDNTIPEYLQPALAQLEKARAAHLENARLMDETVTAIERAEQE
                     KNALAQADGNDADDWRTAFRAAGGVLSDELKQRHIERVARRELVQEYDNLAVVLNFER
                     ERLKGACDSTATAYRKAHHHLLSLYAEHELEHALNETCEALVRAMHLSILVQENPLAN
                     TTGHQGYVAPEKAVMQQVKSSLEQKIKQMQISLTGEPVLRLTGLSAATLPHMDYEVAG
                     TPAQRKVWQDKIDQQGAELKARGLLS"
     gene            17544..17810
                     /locus_tag="JQ356_001654"
     CDS             17544..17810
                     /locus_tag="JQ356_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015979398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HAY4621784.1"
                     /translation="MQAVFSSPSPAPVTPLMPLPDITQERFLRLPEVMHLCGLSRSTI
                     YELIRKGEFPPQVSLGGKNVAWLHSEVTAWMAGRIAGRKRGYDA"
     gene            17807..18406
                     /locus_tag="JQ356_001655"
     CDS             17807..18406
                     /locus_tag="JQ356_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000980235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HAY4621785.1"
                     /translation="MMMPALQKLPFSGLPFSGICGYSFSAAAKSAAGRENPSNSQATY
                     DAPRVFFCVAINATERQIMVWCVVSRADGIPCILPASAHYAAESMVAQAGQPPGWPVS
                     CEAGILTPVWAIAIERENSGDSVICYSQEAAIMATTLTPSHPEFVFVFAAVRRADRHP
                     RICMLRTVAGDERSARRSLVRDYVLSLAARLPVVEVSRA"
     gene            18399..18686
                     /locus_tag="JQ356_001656"
     CDS             18399..18686
                     /locus_tag="JQ356_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001244665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Derepression protein"
                     /protein_id="HAY4621786.1"
                     /translation="MRNKKAPQTVSARHDAREHLSIEAYHKLNRASAVSQFVGGDLIH
                     RELSGLHQLYIPHIFSYLNEDIDFVLNELKAKGLCRDFLAQQKDRGDRTHV"
     gene            18679..19134
                     /locus_tag="JQ356_001657"
     CDS             18679..19134
                     /locus_tag="JQ356_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016569899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621787.1"
                     /translation="MFDFPQPGEIYRSAGFPDVAVVGILEDGIPWEMPYRCPDIVWNP
                     YRRKFSILVRILADGRTTDIPLGRFLREFTCDRPDLFKRSPVNRHAVLKEMAGDPELQ
                     KWREKYQDIYPQDTVPVSRAAPVAREWREIPRTEPDPEITPDNSYRNYL"
     gene            19270..19590
                     /locus_tag="JQ356_001658"
     CDS             19270..19590
                     /locus_tag="JQ356_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5375 domain-containing protein"
                     /protein_id="HAY4621788.1"
                     /translation="MKTPLPPVLRAALYRRAVACAWLTVCERQHRYPHLTLESLEAAI
                     AAELEGFYLRQHGEEKGRQIACALLEDLMESGPLKAAPSLSFLGLVVMDELCARHIKA
                     PVLH"
     gene            19605..21938
                     /locus_tag="JQ356_001659"
     CDS             19605..21938
                     /locus_tag="JQ356_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000783678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY4621789.1"
                     /translation="MKMNVTATVSHALGHWPRILPALGIQVLKNHHQPCPVCGGSDRF
                     RFDDREGRGTWYCNQCGAGDGLKLVEKVFGVSPSDVAAKVAAVTGSLPPADPAVTAAA
                     VAETDAARKNAAALAQTLMAKTRPGTGNAYLTRKGFPGRECRMLTGTHRAGGVSWRAG
                     DLVVPLYDDSGELVNLQLISADGRKRTLKGGQVRGTCHTLEGQNQAGKRLWIAEGYAT
                     ALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLSGDGQKKAAAAAD
                     ACEGVVALPPVFGDWNDAFTQYGGEVTRKAIYDAIRPPAESPFDTMSEAEFSAMSTSE
                     KAMRIYEHYGEALAVDANGQLLSRYENGVWKVLPPLDFARDVAGLFQRLRAPFSSGKV
                     ASVVDTLKLIIPQQEAPSRRLIGFRNGVLDTQNGTFHPHSPSHWMRTLCDVDFTPPVE
                     GETLETHAPAFWRWLDRAAGGRAEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKS
                     IMAEIATLLAGEDNATSATIETLESPRERAALTGFSLIRLPDQEKWSGDGAGLKAITG
                     GDAVSVDPKYRDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVIIHFPEQIAPQERD
                     PQLKDKITRELAVIVRHLMQKFSDPMLARSLLQSQQNSDEALNIKRDADPTFDFIGYL
                     ETLPQTSGMYMGNASIIPRNYRKYLYHAYLAYMEANGYRNVLSLKMFGLGLPVMLKEY
                     GLNYEKRHTKQGIQTNLTLKEESYGDWLPKCDDPATT"
     gene            22104..22298
                     /locus_tag="JQ356_001660"
     CDS             22104..22298
                     /locus_tag="JQ356_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY4621790.1"
                     /translation="MWIKDALVWIRATDPNLLIKNYLTFRFIDGLKIDWSEKQWGHKR
                     GHISLLCFIICFLSLTYFDI"
     gene            22516..23784
                     /locus_tag="JQ356_001661"
     CDS             22516..23784
                     /locus_tag="JQ356_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY4621791.1"
                     /translation="MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRF
                     GGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKV
                     AREWLVTNQKWSEEHANRVKKSLEDNIFPAIGSHNIAELGTRDLLIPIKAVEKSGRLE
                     VASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKID
                     EYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRG
                     AKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENTVNSALRVMGYD
                     TKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLM
                     LQWWADFLDANREKGITPFDYAKINRGNGE"
     gene            24175..>24554
                     /locus_tag="JQ356_001662"
     CDS             24175..>24554
                     /locus_tag="JQ356_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621792.1"
                     /translation="MNFKKKLEEHFKQFEASPVLFVGSGVSRRYLGVPCWQDLLKHFA
                     EAIGENHIKLKTKSNGDLPEYAQLLVSAYAEKWWDTEEGQLALSEKEQEKTFINEQSP
                     LKLSISKYIENAHKNIIDNDELKH"
BASE COUNT         5829 a         6366 c         6101 g         6258 t
ORIGIN      
        1 cttcctttaa tcaataaaga agaacaacca gataaaggct tcttagccag tatttcacgg
       61 ggaattatgc cttctttacc atttctgtaa gagataaaaa aggccggagc atgctccggc
      121 cttcgttttc atcactgtgt tttgattaca gcgcggcgat aacagcctgc tgttcaatca
      181 gcttcgcttt cgcttctgca tagccttcca gcttctcacg ctctttcgcg atgaccgctt
      241 ccggtgcgcg ggcgacaaag ccttcattcg ccagcttgtt ctcgatacgg ctgatttcgc
      301 cttcgatctt cgccacttct ttcgccagac gcgccagctc atcttctttg ttgatgaggc
      361 cagccatcgg gatcagcagc tctgcgccgt cgatgatctt cgtaacggaa accggacctt
      421 tgtcatcggc aggcagcacg gtgatgcttt ccagacgcgc cagggtttgc aggaagccac
      481 ggttttcatt tacgcgacgt tctgcatccg cgctgcaacc acgcagcagc agctccagcg
      541 gtttgcccgg cgcgatgttc atttctgcac ggatgttacg taccgcaacg atcgcctgtt
      601 tcagccactc ggtgtcagcc agtgcggctt catcaacctg agatgcatcg tactgcggga
      661 acggctgcag catgatggtg tcggcagtga taccgcaaag tactttcaca cgctgccaga
      721 tggtttcggt gatgaacgga atgatcggat gcgcgaggcg cagcagacct tccagtacag
      781 tcaccagcgt atggcgagta ccgcgcagtt cggcttcggt tccaccgttc attaccggct
      841 tagtcagctc cagataccag tcgcagaact ggttccaggt gaactcatac agaatgcctg
      901 cagcgatatc gaagcggaag ctgtccagcg cttcgcggta cgctttgatg gtctggttga
      961 actctgccag aatccagcgg tccgccagcg acagcgtcat ttcaccaccg ttgaagccgc
     1021 aatcctgacc ttccgtgttc atcagcacaa agcggctggc gttccacagc ttgttacaga
     1081 agttacggta gccttccagg cgtttcatat cccagttgat gtcacgaccg gtagaagcca
     1141 gcgccgccag ggtgaagcgc agggcatcgg tgccgtgcgg ctcaatgccg ttcgggaact
     1201 gtttctcggt gcgcttacgg attttgtccg ccagctgcgg ctgcatcata ttgccggtac
     1261 gtttctccag cagttccggc agcgaaatac cgtcaaccat atccagcggg tcaataacgt
     1321 tacccttgga tttggacatc ttctggcctt cgtcgtcacg aatcaggccg gtcatgtaaa
     1381 cggtgtggaa cggcacctgc ggtttgccat tttcatcttt gatgaagtgc atggtcatca
     1441 tgatcatgcg ggcaatccag aagaaaatga tgtcgaaacc agataccatc acgctggttg
     1501 ggtggaactg gcgcagtgcg tcggtgtttt ccggccagcc tagggtagag aaggtccaca
     1561 gcgcagaaga gaaccaggtg tcgagaacgt cttcgtcctg acgcagggca acgtcggcac
     1621 cgaggttatt ttccttgcgc acttcttctt cgttgcggcc aacataaacg ttacctgctt
     1681 cgtcgtacca tgcagggata cggtgacccc accacagctg acgagagata caccagtcct
     1741 gaatatcgcg catccaggag aagtacatgt tttcgtactg cttcggtacg aactgaatgt
     1801 cgccgttctc aaccgcctca accgccggtt tcgccagtac atcggcacgc acgtaccact
     1861 ggtcggtgag catcggttcg ataactacgc cgccacggtc gccgtaaggc acggtcaggt
     1921 cgtgcggttt aatttcttcc agcaggccga gcgcgtcaac cgcagcaacg actgctttac
     1981 gtgcagcaaa acgctccagt ttctggaact ctgccgggat ttcgctggaa taaacgtcag
     2041 attcgttacc tttggtatcg aacacctggg cgctttcacg gatatcgccg tcaaaggtca
     2101 ggatgttgat catcggcagc gcgtgacgtt tacccacttc atagtcgtta aagtcgtgcg
     2161 ccggagtgat tttcacgcag ccggtgcctt tttccatgtc ggcgtgttcg tcgccaacga
     2221 tcggaatacg acggttaacc agcggtagaa tgacatattt gccaatcagg tctttgtaac
     2281 gcggatcttc cgggttaacg gccacgccgg tatcgcccaa cagggtttcc ggacgggtag
     2341 tcgcaaccac cagataatct ttaccgtctg cggttttcgc gccgtcagcc agcggatagc
     2401 ggatgtgcca catcgaacct ttcgattcgc ggttttccac ttccaggtca gagatagcgg
     2461 tgcgcagttt cggatcccag tttaccaggc gtttgccacg gtaaatcagg tcttctttat
     2521 acagactaac gaaaacttct ttcaccgcat tggacaggcc ttcgtccatc gtgaagcgtt
     2581 cacgctccca gtcgacggag ttgccgagac ggcgcatctg acgggtaatc gtgccgccgg
     2641 attccgcttt ccattcccaa attttgtcga tgaaagcttc gcggccgtag tcgtgacggg
     2701 ttttaccttc ttctgcggca atcttgcgct caacgaccat ctgggtagcg atcccggcgt
     2761 ggtcagtacc gacctgccac agggtgtttt tgccctgcat gcgctgatag cggatcatgg
     2821 tatccatgat ggtttgctgg aaggcgtgac ccatatgcaa actgccggtg acgttcggcg
     2881 gcgggatcat gatgcagaaa ctttcctggc tttcatcgcc attaggctta aagtagccct
     2941 gcttttccca gtgctcgtaa agcggctgtt cgatatcttg tgggttatat gtcttttcca
     3001 ttatttccag gttgccgtat tcaggttgaa accagccacg cggtaggctt tatagcgttc
     3061 gcgcgccagt tgtttcagag aatcttcata aggaacgaag tctaccactt ctgtgaaagc
     3121 ggtggcaaaa tctgcaaagc ttgttcgcag actaatcaat atatcgcgcg ggctgctgct
     3181 gcgtttttgc ggccaggcga tctccaccgg cgcaccgccg cgcggtcctt ctcccgctaa
     3241 attatgcgga acaaagcttt ctgccggacg cgcccacagg gcttcatcca gccggtaagc
     3301 ctgcttttca tcttcacagg cgatgagcac gcgcttaccg ctgcgccaac gttctgcggc
     3361 aatttcacac accagttgct caacggtgct taagccatcg acggtggtgt cattgtccag
     3421 aaggtagaac gtcgcgtttt tcatatatgg ggcttcttgt ggtggattta aatacgcatc
     3481 aggtatacac cgcagcgcct gatgcgacgc tgttgtgtct tatcaggcct acgagttcag
     3541 tgctgtgtag gtcggataag gcgttcacgc cgcatccggc aataacagcc ttgcctgacg
     3601 caattactct tcgccgttaa acccagcgcg gtttaacagg aactgtgcca gcaacgccac
     3661 cggacgaccg gtggcgcctt ttgctttacc agaacgccag gcggttccgg cgatatccag
     3721 gtgcgcccag ttgtacttac gggtaaagcg cgacaggaag caacctgcgg taatcgcccc
     3781 accaggacga ccgccaatgt tcgccatatc ggcaaaattg gactccagct gttcctgata
     3841 ctcgtcaccc agcggtaagc gccatgcgcg gtcaccggat tgttcagacg cggcaatcag
     3901 ttcatgggcc agcggattat ggttcgccat cagaccggta atgtgatgac ccagcgcgat
     3961 cacgcaggca ccggtcagcg tcgccacgtc aatcaccgct tccggctcaa aacgctcaac
     4021 gtaagttaac acgtcgcaca gtaccaggcg gccttcagcg tcggtattca gcacttcaac
     4081 agtttgaccg gacatggtgg ttaacacatc gcccggacga taggctcgtc cgccaggcat
     4141 gttttcgcag cctgccaaca cgccgataac gttaatcggc agttgtagct ccgcgaccat
     4201 ccgcatcacg ccgtaaaccg ctgccgcacc gcacatatcg tacttcatct catccatgcc
     4261 ttctgaaggc ttgatcgaga taccgccgga gtcgaaggtt aaacctttac ccaccagcac
     4321 gattgggcgt gcatcttccg acgcgttgcc tttgtactca atcaccgaca tcagcgattc
     4381 gttttgcgaa ccctgaccga ccgccagata ggaatgcatc cccagctctt tcatctgctg
     4441 ttcgccgata acgcgggtga tgacattctt gctgtagctg tcagccagct ggcgcgcttg
     4501 tgaagcgagg taagcggcgt tacagatatt cggcggcata ttgccgagat cttttgctgc
     4561 tttaatcccg gcggcaatcg ccagaccgtg caggatcgcg cgctcaccgc tggtcagttc
     4621 acggcgggtc ggcacgttga acaccatttt acgcagcgga cgacgcggtt cgctcttgtt
     4681 cgttttcagc tgatcgaaac tgtagagcgt ctcttttgcc gtctcgacag cctgacgcac
     4741 tttccagtag ttgttacggc ctttaacgtg cagttcagtc agaaagcaga ccgcttccat
     4801 tgagccagta tcattcagcg tattaatggt tttctgaata acctgcttgt actgacgctc
     4861 atccagctca cgttctttgc cgcaaccaat aaggagaatt cgctcggaaa gtacattcgg
     4921 aacatggtgc agcaacaatg tctgccccgg ttttccttcc agttcgcccc gacgtagcag
     4981 ggcgctgatg tacccatcgc tgattttatc gagctgttct gcaatcggag aaaggcgacg
     5041 tggttcgaag acgcccacga cgatgcaggc actccgctgt ttctccgggc taccgctttt
     5101 tacactaaac tccatgcact acgctcctga atcttaaaga caacggcggt ggctacagat
     5161 agaattgcaa gctttcgtaa ctcatgtccg ctgttgcgat gacttcgtgt taatcttaac
     5221 gttattacgg cattggcacg tcagaacaaa atctgagagg tgaatccgtt gagtataatt
     5281 atcttagcga cgatttcgac gactcaagag aataaatgac gtttaagcca tgaaacaagc
     5341 taaaatcctg caaaagacga gtttttacgg gcgtatttaa agtgataatc ataagatatc
     5401 tggtgcggga gacgctcaaa agccagctgg cgatactctt catcttgctt ttgatcttct
     5461 tctgtcaaaa gttagtgagg atcctcggcg cagcggttga cggcgatatt ccggcgaatc
     5521 tggtgctctc ccttctcggg ttgggcgtgc cggaaatggc gcagcttatc ctgccattaa
     5581 gcctgttcct cgggctgctg atgacgctgg gcaaactgta taccgaaagt gaaattacgg
     5641 taatgcatgc ctgcggcctg agcaaagcgg ttctggtgaa agcggcaatg atccttgcgg
     5701 tattcactgc aatcgtcgcg gcggttaacg tgatgtgggc gggaccgtgg tcatcgcgtc
     5761 atcaggatga agtgttagca gaagcgaaag cgaaccctgg catggcggcg ctggcgcaag
     5821 ggcaattcca gcaagcgact aatggcagct cggtgctgtt catcgaaagc gttgacggca
     5881 gcgatttcaa agatgtgttc ctcgcgcaaa ttcgaccaaa aggtaatgca cgtccttctg
     5941 tggtggtggc cgattccgga catttaaccc agctgcgcga cggctcccag gtcgtcactc
     6001 tcaaccaggg aacgcgcttc gaaggcactg cactgttacg tgatttccgc attacggact
     6061 tccaggatta tcaggcgatc attggtcacc aggcggtagc gctcgacccg aacgataccg
     6121 accagatgga catgcgtaca ttgtggaaca ctgacaccga tcgtgcccgc gcagaactga
     6181 actggcgtat cacgttggta ttcaccgtgt ttatgatggc acttatggtc gtaccgctga
     6241 gcgtggttaa cccgcgtcag ggacgcgtac tatcgatgct gccagccatg ctgctgtatc
     6301 tacttttctt cctgatccag acctccctga aatcgaacgg cggtaaaggt aagctggacc
     6361 cgacgctgtg gatgtggacc gttaacctga tttatctggc tttggcgatt gttctcaacc
     6421 tttgggacac cgtgccggtc cgccgcctgc gcgccagttt ttcgcgtaaa ggagcggtgt
     6481 gatgcaacct tttggcgtac ttgaccgcta tatcggtaaa actattttca ccaccatcat
     6541 gatgacgctg ttcatgctgg tgtcgctgtc gggcattatc aaatttgtcg atcagctgaa
     6601 aaaagccggg caggggagtt acgacgcgtt aggcgcagga atgtatacct tgctgagcgt
     6661 gccgaaagat gtgcaaacat tcttcccgat ggcggctctg cttggggcgt tgcttggtct
     6721 tgggatgctg gcgcagcgca gcgaactggt ggtgatgcag gcttctggtt tcacccgtat
     6781 gcaggttgcg ctgtcggtga tgaaaaccgc cattccgctg gtcttgctga cgatggcgat
     6841 tggtgaatgg gtcgcgccgc agggcgagca gatggcgcgt aactaccgtg cgcaggcgat
     6901 gtacggcggc tcgttgctct ctacccagca aggcttatgg gcgaaagatg gcaacaactt
     6961 cgtttacatt gagcgggtta aaggtgacga agagttaggt ggcatcagta tttatgcctt
     7021 taacgagaat cgtcgtctgc aatccgtacg ctatgccgct actgcgaagt ttgacccgga
     7081 acataaagtc tggcgtctgt cgcaggttga tgaatctgat ctgaccaatc cgaaacagat
     7141 caccggttcg cagacggtga gcggcacctg gaaaaccaac ctcacgccgg acaaactggg
     7201 cgtggtggcg ctggacccgg atgcactctc aatcagcggt ttgcacaact acgtgaagta
     7261 tctgaagtcg agcggtcagg atgccggacg ttatcagctc aatatgtgga gcaaaatctt
     7321 ccagccgcta tccgtggcgg tgatgatgct gatggcgctg tcgttcatct ttggcccact
     7381 gcgtagcgta ccgatgggcg tgcgtgtggt caccggtatc agcttcggtt ttgtcttcta
     7441 cgtactggac cagatcttcg gcccgctgac gttggtttat ggcatcccgc cgatcatcgg
     7501 cgcactgttg ccaagcgcca gcttcttctt aatcagcctg tggctgttaa tgagaaaatc
     7561 gtaaccgaat gaacgaataa agggagcgaa agctcccttt attattgtta gcaaagtgtg
     7621 cttcgttcat gcctgaaaaa tcatgaaaat ccaatatatt gcagtggtgt aggcatgata
     7681 agacgcgcca gcgtcgcatc aggcaaagac aaatctcgcc tgacttacct tcttcttccc
     7741 cccagcaaac tccccaacat cccacgtaca atctgattcg tcacctggcg ggcggcgctt
     7801 ttcgccattg tttgcaccac accatctttc ttcccgccgc gtggtccggt agtgccaaac
     7861 aaaatatcct tcaatccacc aagaataccg tcatccaccg ccaccgcttt ccctttcgcg
     7921 ggaggattat tttgctgctt ggtactggcc tgaaagcctt tttgcaacat ctcataggcg
     7981 gattcccggt ccacgtcatc ctcgtacttg ccatacaccg gggagtggtt aatcaagcca
     8041 ttgcgctcat cttccgtcac cggtcccatc cgcgaacaag gcgcaatcac catcgcccgt
     8101 tccaccacag aaggacttcc ttttgcatcg agaaacgaga ttaacgcctc gccggtcccc
     8161 agttcctgga ttgccttttc ggtatcaaac gccggattgg cccgcatggt ttgcgccgca
     8221 gcttttaccg ctttctgatc tttgggcgta aaagcccgca aagcgtgttg aacgcgatta
     8281 ccgagctgcc cgagcacatt atccggaata tcagacgggt tttgcgaaac gaaccagacg
     8341 cccacgcctt ttgagcgaat aagccttatt acctgctcaa tcttatccag cagtacctgc
     8401 ggtgcatcgt taaacagcag atgtgcctcg tcgaagaaaa acaccagttt tggtttctcc
     8461 agatcgcccg cttccggcaa ttgttcatac aactctgaaa gcatccacag caggctggcg
     8521 gcgtacagtt tcggcatctg ataaagcttc tcggcgctga ggatattgat aacgccttta
     8581 ccgttggtat cggtgcgcat ccagtctttg atatccagca tcggctcgcc aaagaaatgc
     8641 gccgcacctt gcttttccag cgacagtaaa ccgcgctgga tggcaccaac cgatgcgcta
     8701 ctgatattac cgtactgatt ctggaaagat ttggcgttat cgccgatgta ctgggtaatc
     8761 gcccgcagat ctttaaagtc gagcagcaac aatccctgat cgtcagcaat acggaagatg
     8821 atattcagca cgccagattg cacatcgttg agattcaaca gccgcgccag caacagcggc
     8881 cccaggtctg aaaccgtcgc ccgcaccgga tggcctttct cgccaaagat atcccacacc
     8941 accaccggat tagcatgcgg ttgccagtca ttgacgccga tatttttaag ccttgtgagc
     9001 agtttttccg acgccgttcc tgcctgcgcg ataccggtca gatcgccttt cacatcagcc
     9061 ataaacaccg gcacgccgat ttccgacaat gactctgcca gtttttgcag cgtaacggtt
     9121 ttacccgtcc ccgttgcgcc agtaatcagc ccgtgacggt tagccattcc cggcagtaaa
     9181 aaaagttctg tgtccggcgt gcgggcaatt aataggggtt cgctcatgag atttcctcca
     9241 gtttcctgcc tggagtatag gcaacggctg cgcactcttc accgctaaat tcagcagatt
     9301 gcgagacgcc ttccaaagag atttaagtgc cgggcgacag gcacccggca aagggatcag
     9361 aagtcggctt tcagaaccac gcggtaacgc gccttaccgt cgcgcacatg cttgatggca
     9421 tcgttaattt tcgacatcgg gaacagttcg gtggtcggcg caaccttgct acgggcggca
     9481 aagcgcatca gctttcgcag ctcataaggc gtgccggtag cagaaccaga gatgctgcgg
     9541 tcgcccgcaa ttaatgtaaa ggccggaaca gacagcggcg tgagaaccgc accgaccgta
     9601 tggaaattac cgccataggt cagcgcctca aaataaggct gccagtcgag gctgacgttc
     9661 acagtattga taatgagatc aaactgcccc gacagggctt tcagtgcctg cggatcgcgg
     9721 ctattcacca ctttatcggc acccatcgcc agtacttcct gctctttcgc cggattagaa
     9781 ctaaaggccg tcacctcgca tcccattgcg tgcagaagtt ttatagcgat atgccccagc
     9841 ccgccaatac caattacccc aacgcggctg gtagcagtga tatggtgcat caacagtggt
     9901 ttaaagaccg tgataccgcc gcacaacagc ggcccggcgg actcgatatc aatattttca
     9961 ggcagtggaa tcacccattg ccagtccgca cgcaacttct cggcaaagcc accgcgattc
    10021 ataatcgtcg gcaccgcacc ttgctcgcag ttgatctgat taccgctaat acaggcgtcg
    10081 cagtgaccac agctacgcgc cgtccagcca atcccgacac gctgaccgac ctgcaaacct
    10141 ttatcctgcg cggcgctccc gagtgccacc acgcgcccaa tcacctcatg cccggcaacc
    10201 agcggatatt gtgaaaatcc ccattcattg tcgatcatcg atagatcgga atggcagatc
    10261 ccgcaataat ccacctgcac ttcaacatct tgtggcctca gctcaccggg atcgtactca
    10321 taaacttcca gttcgccgcc cgcttctttt gcggcatagc tttttatcat cgacattttt
    10381 tggtccttct ctggtgttgt ttgggaagtg tagagcatgg cagggcgggg tgcctggagt
    10441 gtgacaaagg ttacacatcg ctgtgtgcaa tgctgaaaat ttcagcactt agcgaggtgc
    10501 gagcaagctg gcgcttgcat ggtggcgtgc gacaggtata atccacaacg ttttccgcat
    10561 acctcttcag tgccgaagtg gcgaaatcgg tagacgcagt tgattcaaaa tcaaccgtag
    10621 aaatacgtgc cggttcgagt ccggccttcg gcaccattct tacttccaag accatccgag
    10681 aaagtccaaa tatcccttta aaatcaatgc ttgcagcgat tttttcgtcc tgcgtcttcc
    10741 gaggttgtcc gttgaaatcc ggatatcatt gggggcataa ttgggggcat cttaacttcg
    10801 attagaaatg tgcccccaaa tgaagctcaa cgccagacag gtcgagaccg caaagccaaa
    10861 agacaaaacc tacaaaatgg ccgatggtgg tggtttgtat cttgaggttt cggccaaagg
    10921 ttccaaatac tggcgcatga aatacagacg tccctctgac aaaaaagagg atcgtctcgc
    10981 gtttggtgtt tggcctactg tgacgcttgc tcaggcaaga gcaaagcgcg atcaagctaa
    11041 aaagctgtta gcgcagggca ttgatccaaa agccgaacag aaagaagctc aggccgagaa
    11101 ttcgggggca tattctttcg aaactatcgc tcgtgaatgg catgctagta ataagcgctg
    11161 gagtgaagat caccgatcac gcgttctacg ttatcttgag ctttatatct ttcctcatat
    11221 tggttcatct gacatccgtc agctcaaaac tagccaccta ttagccccga ttaaaaaagt
    11281 tgatgccagt ggtaagcatg acgttgcaca gcgccttcag cagcgtgtca cggctattat
    11341 gcgttatgca gtacagaacg attacatcga ctcaaatcca gccagtgata tggccggtgc
    11401 gctatcgaca accaaagcgc gacattaccc cgctttgccc tccagccggt tccctgagtt
    11461 tcttgctcgt cttgctgcat atcgtggccg tgtaatgacg cggatcgcgg ttgagctttc
    11521 cttactaact tttgtgcgtt ccagtgagtt acgtttcgcg cgttgggatg agttcgactt
    11581 cgataaatct ctctggcgag tacctgcaaa acgagaagaa attaaaggtg tgcgttactc
    11641 gtaccgtggc atgaagatga aagaggagca tatcgttcag cttagtcggc aggcgatgat
    11701 tttgctaaac cagttaaagc agattagtgg agataaagag ctgctttttc cgggtgatca
    11761 tgacgcaact aaggttatga gcgaaaacac ggtaaatagc gcattgcgtg cgatgggcta
    11821 tgacacgaaa accgaagttt gcgggcacgg gtttagaacg atggcccgtg gtgcgttggg
    11881 cgagtccgga ttatggagtg aagatgctat agaacgacag ttgagccatt cagagcgtaa
    11941 taatgtacgt gctgcttata ttcacacctc tgaacatttg gatgaacgtc gattgatggt
    12001 tcaatggtgg gctgattatc tccaagcaaa taagggcaaa acaataacac cttatgattt
    12061 tgctaaaata aacaaaagtc gatagtgaaa ataaacgcct ataatatata ggcgtttatt
    12121 tctgtattaa acactttgat cataatcttc cagcagcaac tttttttcgt acttcatctt
    12181 tccaattgcc actatggatt attctatcga aattacttcc tgctcttcct gataataagt
    12241 caattcgaga tagcttgctg atatcatccc agttatcata gaggatatat atagcattac
    12301 catattctat gttttcaaat acaaccaaat cgtcctccag catagctcca atataattac
    12361 tgaacgtgct gtttcctgtg acgatttttt taggttcaag actcatgaag aagtcatatc
    12421 tattttcagc gacatttttc ttgtcggaag tgatattttt acctctaaaa attcttgcta
    12481 aagtttcttc tttactacct ggtggaaata tttcccatga gactataagt gtatcagcat
    12541 aagtcgatat gggtttatca gcatcctcaa ttccacattt accaagattt tcttgaagaa
    12601 gatttaaatc aaataataat tcatcatcaa acttatttga ttgtttgtct aaaattctag
    12661 ttactctgaa gttaaatatg aaatggctgt ccgagggctg tttgtgatta atttcaatgg
    12721 ctatgagtgt tggtggtata atgtctctgg gatatttctc gtaaggtaat ctaacagtat
    12781 gtgtaccatt agagctatca ccccagttag gtgactcaat ttcagtgtaa tgagtttctt
    12841 ttgggaggtc ttttctgaca atttcttcac caaaaacatt tttaagtgaa tatttaccct
    12901 gcaatggatc tggtatgacc gacgtctcat aagcattaac accattatca aaatatattc
    12961 caaggtgctc taatgctcca ctttttaatt ggttttccgt aaatgcaata gaagtgccag
    13021 caacaactgt attaccaagc cttcttaact tgctatgaat atttttaggt ataacacgta
    13081 tattcttttt catttttccc tcatacttga tcatcaatgt ctctttgctc tcgcttgtta
    13141 tgtaaatcat tgataaacat aacatttgca agtattacgc taattactgc ctcaatctgc
    13201 atgtacgaaa tagcaataat taatgctaaa gatgtgtttt ttattacatc ttggctctct
    13261 aaataaagat gacttttgaa aaacactagt ttaactaagt atacaacaag taaagtaatc
    13321 ataacgaaag atgattttag aacacttcca actattgctt ctaatcttct tgtatcttcc
    13381 agttgttcgg tgaaatcaac ggtttctata gttttggggt tcacaatacg ctgcaaagca
    13441 tttgggtaaa gaaacgctaa ccaaattccc ataatagtaa aaaccattcc agaaactgat
    13501 acgagaagag tgcaatagtt ggcaaaatcg ttatacacat agttaatatc ggatgacgaa
    13561 ataatcatca gcgatataat gaatatcgcc atgtatatcc atgtgtattt ggctatgcct
    13621 gctatagctt tcaatattca atcctctcca gatgctttct ttattcttgg ttgagattgt
    13681 aatgctttta attcttttaa tataggggaa ataaattctt ttcttttgtg tgatatttgt
    13741 tcataaatat atgcggcgga atatgttgaa tagtcgtcag aagggacatt gagaatatca
    13801 cgcattctat atttatccac ccaagttata cccttgtctg tagcaaatcc aacattgtcc
    13861 caaagacgtt tttctctatc ctcagccgaa tacttttcaa tgatttcttg aacttcattc
    13921 aaggatggtt ttgcttctgc ttttatttca atttgtcttg ttttggcatt tttctttccg
    13981 gacacaaatg gaacgagagt gctaaaggtc tttaaccaat cagctcgtgc atcatttgga
    14041 tttataataa tagtttccct gcgaactatg tgtgttattt ttggtattag tttacctaac
    14101 tcagtatgag tggtttctaa gcttctgagc ttcatatcaa acctgtacat atatttatat
    14161 aagtcttcgt catcggtatt agatagcctt atataacctt tctcggtttt atttttaacc
    14221 cttttgctat gtttaactct attagtaata gatgagtgta catagtcttg aaatagttca
    14281 gaatcacaaa cagaatggtc gaatttaatg gatactatag tttcaagttc aggtataacc
    14341 caataaaagc atggccgccc ccagataact tttttccctc tgtagctatt agtatattta
    14401 accaccgatg agcttccgat ttcaccgtct tcactagctc ctaataaaga gcccgtacta
    14461 tcagtatcag atttccataa catgactaag aaatcaccag tattttcatc cttataaata
    14521 tccttgcaat aacactttga actgtttggt ttttcttttg gatcccatgg tatcgtgagt
    14581 gcaagagatt tagttcccac ccaatcctgt atgaggtcaa atgtttcgct aagttctaaa
    14641 ccataggtat tgtcatcatt taccttgtat aaaccgcact tattaacctt gaagaaattg
    14701 agatgcccta cattcatgct ctttccttag cttcttatct tgggatatgt atcatgatca
    14761 aaaattaagc ataaccccat tgacttcgtg cgggcaatgt tttcacccta gaatttgatc
    14821 ggtttaacgt taaatattca taagttacat gagcattttt cacttcttcc caattacaga
    14881 cgtcatgagc tgaatattaa taaaataatt atcctcacgg catggcgcgc aatgctctcc
    14941 ccgccacgcc cgcccgcttt gcagggcggt tttaatgcag ttgcacagtc acgctcaggc
    15001 tgcgccggga atggcgcggt ctgcagaaaa tgaggcagga aaacgcatgc aaagccatgc
    15061 accttatcga tgcatggctt ttttcagtaa aaacgggcgg attttcgggg aattttacac
    15121 agactgacgt gatgccagtt gcgcactttt acgcgaaaaa atcatgttct gcgcaggggt
    15181 gaatttttca cggctgtcat ccaccgaagt cgcgtcaggc ctgaatccga tggtcgttaa
    15241 aatgtcacta tcctgtgcgg aataattaat tttttccccc ttcgcaagcc aggacagaag
    15301 ggcttcacgc agggcatctg tggcacgctg tatggcacag tttcgggcaa tggccgtcag
    15361 ctcactgtag cccatcagct ccggtgccag tgccgccgcc agtgctgtgc cgtgctgctg
    15421 cataaaatca ttcagccggt cgcggatgct gatgtgctga acggcttcat gcgaacgaat
    15481 ataacgaccg gcagcctgat tcacctgcca ttttctgact tcgataatat tgcgtaattc
    15541 gtccaggcga ctgacgtttc tgccttcccc ggacagaagc cgcagatatt cctgttcggc
    15601 cgcagccagc tcatttttgc gttgcagcca tgctgctttg ttattctgac aggtgtcaaa
    15661 ggcctgctgt aaggctgtgc tttccatcgt tatctctttc tcatcatgct gaagaataaa
    15721 aatacggtgt gcggcgacgg ccggtgttaa ccggcagccc tcattccaga cgcagcgaat
    15781 atgattgtgt ttttaagcgt actggcggca gttcctgttt ttcatgcagg ctttctgcca
    15841 gttcgtccgg cgtgaccggg cggacaataa aacggttgat ggtctgaagc gttttaaaca
    15901 ccagaccaca gcccggatcc gtgcacacat aaaaacgctc ggtgacttcc tgagacagac
    15961 gccgcgatgt tcttgacagt gcaaggcctt tacatctccg acaacaatat ccggtaacaa
    16021 gcattctttt cgggcgtttc atactgccgg aggctgacgt cagtgaatcg cggtatctct
    16081 gtttgcctga aatgtattcc attcctgaat ctttacagtc agagaaaaag ctttcactcg
    16141 cttcaaatgt cgcagagcaa taaatattcc ggcactgtgc aatcattatc ttggtgccat
    16201 cgtccatgaa atgtgcgcga cgggtgtgag caacatgtcc acacgacggg cagtaaatca
    16261 tgacagcagt cctctggcct taagctctgc tccctgctgg tctattttgt cctgccacac
    16321 cttgcgctgt gccggtgtgc ctgccacctc ataatccatg tgcgggagtg ttgccgctga
    16381 cagtccggtc agccggagaa ccggctcgcc ggtgaggctg atttgcatct gtttaatttt
    16441 ctgttccagc gatgatttca cctgctgcat gacagccttt tccggtgcga cgtagccctg
    16501 atggccggtg gtgttggcga gcggattttc ctgtaccagg atactcagat gcattgcccg
    16561 gacaagcgcc tcacaggttt cattcagggc gtgttccagc tcatgctctg catacagact
    16621 cagcaggtga tgatgtgcct tccggtaggc ggtggccgtg ctgtcacacg cccctttcag
    16681 gcgttcacgt tcaaaattca gcaccacggc cagattgtca tattcctgta ccagctcccg
    16741 gcgtgccacg cgctcaatgt ggcgctgttt cagctcgtcg ctcaggacac caccggctgc
    16801 acgaaaggcc gtgcgccagt cgtcagcgtc atttccgtcg gcctgcgcca gcgcattttt
    16861 ttcctgctct gcccgttcaa tggccgtgac ggtctcatcc atcaggcggg cgttctcaag
    16921 gtgggcggct ctggcctttt ccagttgtgc cagtgcgggt tgcagatatt cagggatggt
    16981 gttgtcagac attttccggc tcctcgtcac ttcaggttaa gaaaattgtg acgtacaccg
    17041 gacaacaaca cgacgcattg cagatgtgcc agccctgaca caggagactc atcctcagac
    17101 cggcaagcca ggaaaaggtc gcaggaaaaa ccggcttact gtttgttttt ttatatttta
    17161 ctgttcacct ctgttcacca taagaaaaaa gataagtaat acagtaagtt aaagggtgaa
    17221 caatcgcagt aatgactgtt caccgtctgt tcaccactgt tcacccgctc atagactttt
    17281 tgtgctgttt attacttttt atttttatta atccactgaa ataaataaga aaaaacaatt
    17341 tgtatttcac tatgattttt tccagctcct tccagagcgt tttaaagcca tctggcgctg
    17401 atgtataaaa aatacacagc cattgtaaga ctgccggaac aaatcccccc tgttgcatct
    17461 gccaaaaata ttcacaaaat aaagcgctac ccgaagccgg acggacttat ccggtgctgt
    17521 atggacatta acgaggtagc ccgatgcaag ctgttttttc ttccccgtct cccgcccctg
    17581 tgacgccact gatgccgctg ccggacatca cgcaggagcg ttttttacgt ctgccggaag
    17641 tgatgcacct gtgcggcctg tcacgctcga ccatctatga actcatccgt aagggggaat
    17701 ttccgccgca ggtgagtctt ggcggtaaaa atgtggcctg gctgcactct gaagtcaccg
    17761 catggatggc cggacgcatt gccggacgca aacgggggta cgacgcatga tgatgcccgc
    17821 tctgcaaaaa ctcccttttt ctggcttgcc tttttccggc atttgcggat atagtttttc
    17881 cgctgccgca aaatcggcag ccgggcgtga gaacccgagc aattcacagg cgacatatga
    17941 cgcgccacgc gtcttttttt gtgtcgcaat caatgccaca gagcgccaga ttatggtgtg
    18001 gtgtgtggtc agtcgtgcag atggcattcc gtgcatcctg cccgcgtccg ctcattatgc
    18061 cgcagagtca atggtagctc aggcggggca gcctccgggc tggccggtat cctgtgaagc
    18121 cggtattctc acccccgtct gggctatcgc catcgagcgt gagaactccg gcgatagcgt
    18181 tatttgctat tcacaggagg ctgccatcat ggctacaacc cttaccccct cacaccctga
    18241 atttgtcttt gtgtttgcgg ctgtccgtcg cgcagaccgt catccccgta tctgtatgct
    18301 tcgcaccgtg gccggtgatg aacgcagtgc ccgccgttcc cttgtccgtg actatgtgct
    18361 ctcccttgct gcccgtctgc cggtggtgga ggtgtcccgt gcgtaataaa aaagcccctc
    18421 agaccgtctc agcacgtcat gacgcccgtg aacacctcag cattgaggct taccataagc
    18481 tcaaccgcgc cagcgccgta tcccagtttg ttgggggtga tttgattcac cgtgaactct
    18541 ccggcctgca tcagctctac attccgcata ttttcagcta cctgaatgaa gatattgatt
    18601 ttgtgctgaa tgagctgaaa gccaaaggcc tgtgccgcga ttttctcgcc cagcagaaag
    18661 accggggaga caggacgcat gtttgatttt ccccagcccg gtgagattta ccgttctgcc
    18721 ggttttcccg atgtggccgt ggtcggcatt ctggaagacg gtattccgtg ggaaatgccg
    18781 taccgctgcc cggacattgt ctggaacccg taccgccgta aattcagtat ccttgtgcgt
    18841 atcctcgccg acgggcgcac cacagacatc ccgctggggc gttttctgcg ggaatttacc
    18901 tgtgaccgtc ctgacctgtt taaacgcagc cccgtaaacc ggcatgcggt actgaaagaa
    18961 atggccggag acccggaatt acagaaatgg cgggagaaat atcaggatat ttacccgcag
    19021 gacactgttc cggtcagccg ggcagcaccg gtagcgcggg aatggcggga aattccccgc
    19081 acggagcctg acccggaaat caccccggat aacagttacc gcaattatct gtaattaaaa
    19141 aacgacaccc gaaaaattaa atgtgcgtat tcgcgcaggg atacgcacgt cttcaggaga
    19201 cgcagatatg ccttatcagt taatgcaacc ggcacggaat gcagtcatct gtcacaggga
    19261 ggaaagcaaa tgaaaacacc cttaccgccc gtcttacgcg cagcccttta ccgtcgtgct
    19321 gtcgcctgtg cctggctgac cgtgtgcgaa cgtcagcacc gctacccgca tctcaccctt
    19381 gagtcactgg aggcggccat cgccgctgag ctggaaggct tttatctgcg ccagcacggt
    19441 gaggaaaaag ggcgtcagat agcctgtgcc ctgctggaag atttaatgga atccggcccc
    19501 ctgaaggccg caccgtcgct gtcctttctc gggctggttg tgatggatga actctgtgcc
    19561 cgtcacataa aagcgccggt actgcactga aggagaacaa caccatgaaa atgaacgtaa
    19621 ccgccaccgt cagccatgcg ctcggccact ggccgcgtat tctcccggcg ctggggattc
    19681 aggtgctgaa gaaccatcat cagccctgtc cggtctgtgg cgggagtgac cgcttccgtt
    19741 ttgatgacag ggaggggcgc ggcacctggt actgcaatca gtgtggtgcc ggtgacggcc
    19801 tgaaactggt tgaaaaggtg tttggtgtct ccccgtccga cgtggccgca aaggtggctg
    19861 ccgtgaccgg cagtctgccc ccggctgacc cggcagtgac ggccgccgcc gttgctgaaa
    19921 cagacgctgc ccggaagaac gccgccgcac tggcacaaac cctgatggca aaaacccgtc
    19981 ccggaaccgg taacgcctac ctgacccgca agggctttcc cggccgggaa tgccggatgc
    20041 tgaccggcac acacagagcc ggtggcgtga gctggcgcgc cggtgacctt gtggtgccac
    20101 tgtatgacga cagcggcgaa ctggttaacc ttcagttaat cagtgctgac ggccgtaagc
    20161 gcaccctgaa aggcggacag gtcaggggca cctgtcacac ccttgaagga cagaatcagg
    20221 ccggaaaacg tctgtggata gcggagggat acgcgaccgc acttaccgta catcacctga
    20281 ccggtgaaac ggtgatggtg gcgctttctt ccgtgaacct cctttctctg gccagccttg
    20341 cccggcagaa gcatccggcc tgtcagattg tccttgccgc agaccgtgac ctcagcggtg
    20401 acggccagaa aaaagccgcc gcagccgcag atgcgtgtga aggtgttgtt gccctgccgc
    20461 cggtcttcgg tgactggaat gatgccttca cgcagtacgg cggggaggtc acccgtaagg
    20521 ccatttacga tgccatccgg ccaccggctg aaagcccgtt cgacaccatg agcgaagcag
    20581 agttttccgc catgagtacc agcgaaaagg ccatgcgtat ctatgagcat tacggcgagg
    20641 cgctcgcggt cgatgccaac ggccagcttc tgtcccgcta tgaaaatggt gtctggaagg
    20701 tgctgccgcc actggacttt gcccgggatg tggccgggct gtttcagcgt ctgcgcgcgc
    20761 cgttctcctc cgggaaggtg gcctccgtgg tggacaccct gaagctgatt attccgcagc
    20821 aggaagcccc ctcccgccgc ctgattggct ttcgtaacgg tgtgctcgac acacagaacg
    20881 gcacgttcca cccgcacagt ccgtcacact ggatgcgtac cctgtgcgat gtggatttca
    20941 ccccaccggt ggaaggggaa acgctggaaa cccacgcccc cgcgttctgg cgctggcttg
    21001 accgtgccgc cggtggccgt gcggaaaaac gcgacgtgat tctggccgca ctgtttatgg
    21061 tgctggcaaa ccgctacgac tggcagctct ttctggaggt gaccggtccc ggcggcagcg
    21121 gcaaaagtat catggccgaa atcgccaccc tgctggccgg ggaggataac gccacgtcgg
    21181 ccaccattga gacgctggaa tccccgcgtg aacgtgccgc gttaactggc ttctcactga
    21241 tacgcctgcc ggaccaggaa aaatggagcg gcgacggtgc cggactcaag gccatcaccg
    21301 gcggcgatgc ggtgtccgtg gacccgaaat accgggatgc gtactccacg catatcccgg
    21361 cggtgattct ggccgtgaac aataacccga tgcgcttcac cgaccgcagc ggcggcgtgt
    21421 cacgccggcg ggtgattatt cacttcccgg aacagatagc cccgcaggag cgcgacccgc
    21481 agcttaagga caaaatcacc cgcgagctgg cggtcatcgt gcgtcacctg atgcagaagt
    21541 tcagcgaccc gatgctcgcc cggtcactgc ttcagtccca gcagaactca gacgaggcgc
    21601 tgaacatcaa acgggatgcc gacccgacgt ttgattttat cggctatctg gaaaccctgc
    21661 cgcagaccag cggcatgtat atggggaacg ccagtatcat cccgcgtaat taccgtaaat
    21721 acctctatca cgcctatctg gcctacatgg aggcaaacgg ctaccggaat gtactcagtc
    21781 tgaaaatgtt cgggctgggg ctgccggtga tgctgaagga atacggactg aattacgaga
    21841 agcgccatac caaacagggg atacagacca acctgacact gaaagaggaa agctacggcg
    21901 actggctgcc aaaatgtgac gaccctgcaa caacctgacc cacctgaccg gcatctgccg
    21961 gtcttttttt atcccgacct cccccgaagg tgaacaatcc actgttcacc cttcaccgta
    22021 tattcacccg ttatcacact gaaattaaaa gagaaaaatg aaaggtgaac agtgtgaaca
    22081 gttctttcga aaaaaaattt tttatgtgga taaaagatgc actggtttgg atccgggcta
    22141 cggatccaaa cttactgatt aaaaattatt taactttccg atttattgat gggctgaaaa
    22201 tagattggtc agaaaaacag tgggggcaca aaagggggca tatttcattg ttgtgtttta
    22261 ttatttgttt tttatcatta acttattttg atatttgagt ccggccttcg caccaaaagt
    22321 atgtaaatag acctcaactg aggtcttttt ttatgcctga aatccgcgct acacaaggct
    22381 tttccagctt ttcccctcaa ctgaagtcaa cctgactcaa cccacatcaa caggcttgtg
    22441 agtatactaa tgagtatatt tgccgattcg atattgcttg tatactcacg agataccaat
    22501 ggaaggaaga ccattatggc cctaacggat actaaagttc gctctgcgaa acctgaggag
    22561 aaagagtatt cacttgttga cggcgacggc atgtccttac ttgtaaaacc tggcggttca
    22621 aagtattggc gatttcgttt ccgttttggc ggtaaacaac atttgatggc gttcggcgtt
    22681 tacccggatg tttcgctggc ggatgcgcgg aagaaaaggg aagaggccag aaagctggta
    22741 gctgctggta tcgatcctcg tgagcataag cgtgctgtga aagaagagca ggcgaaagag
    22801 attattactt tcgagaaggt tgccagagag tggctcgtaa ccaaccaaaa atggtcggaa
    22861 gagcatgcta atcgtgtaaa aaagagcctg gaggacaata tcttcccggc aattggttcc
    22921 cacaatattg ctgaactggg cacccgcgat ctgttaattc ctattaaagc cgtggagaaa
    22981 tccggacgtc ttgaagtggc ttcccgcctt caacagcgca ccacggccat catgcgttat
    23041 gcagtgcaaa gcgggttaat tgattacaat ccggcgcaag agatggcggg ggcggtagct
    23101 tccagtaatc gacagcatcg tccggcgctg gagttaaagc gtatcccgga attactccag
    23161 aaaatcgatg aatacaccgg caggccacta acccgctggg caaccgaact taccctgctt
    23221 atttttattc gatccagtga gctgcgtttt gctcgctggt cagaaatcga ttttgaaacg
    23281 tcaatgtgga ccatcccgcc tgagcgagaa cctattcccg gtgtgaaaca ttctcagcga
    23341 ggagcaaaga tgcgtacacc tcatctggtg ccgctttcaa agcaggcgct agcgatcctg
    23401 aagcagataa aacagttctg tggcgaacat gagctgattt ttattggcga tcacgatccg
    23461 agtaagccca tgagtgaaaa cacggtgaac agtgcattgc gggtgatggg ctatgacacc
    23521 aaggttgagg tttgcggcca cggcttccgc actatggcct gtagctcatt gattgagtca
    23581 gggttatggt cgaaggatgc ggtggaaagg cagatgagcc atatggaacg caattcggtg
    23641 agggcggcgt atatccataa agcggaacat ctggatgagc gcaagctgat gttgcagtgg
    23701 tgggctgatt ttctggatgc gaaccgggag aaggggatta cgccgtttga ctatgcgaag
    23761 atcaatcggg gtaatggcga gtgagttatc taaaagcgca cattcgcctc taaattgaaa
    23821 gctgctgact tattcaaacg aggaattggt cagcagtgcc aaatagccga gttttcacta
    23881 aggtaagcct ttttattgaa cctaatcggc agtaatgctc cacctaagcc taaatttaaa
    23941 gtcatgatta cttataaaag gggagtggac ccttgattga gccctacatc gtaacaaagg
    24001 tacagcaatt cggctacatc aggagtgata gtcaattagt taatctaata attaattgaa
    24061 tctaaataat taaatttctt acgtaaaatt gaccaattta ctggtggtgt aagccgcaat
    24121 atcttaatgt aatcagtata aaggggcttg atttctttta aagatagtat ccgtatgaat
    24181 tttaagaaaa aactcgaaga gcattttaag cagttcgaag catccccagt gttatttgtc
    24241 ggctccggtg tgtctcgtcg ttatcttggt gtgccatgtt ggcaagacct tttgaagcat
    24301 tttgctgagg caattgggga aaatcatata aaattaaaaa caaaatctaa tggtgactta
    24361 cccgaatatg cacaattatt ggtgtctgca tatgctgaga aatggtggga tactgaagaa
    24421 ggacaattag cattaagtga aaaagaacag gagaaaactt tcattaacga acagtctcct
    24481 ttgaagttgt caatatctaa atatattgag aatgcacata aaaatattat agataatgat
    24541 gagttaaaac atga
//
LOCUS       DADKRT010000049        24337 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.049, whole genome shotgun sequence.
ACCESSION   DADKRT010000049 DADKRT010000000
VERSION     DADKRT010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24337
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.049"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..147)
                     /locus_tag="JQ356_001663"
     CDS             complement(<1..147)
                     /locus_tag="JQ356_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY4621793.1"
                     /translation="MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYF
                     TNDKR"
     gene            complement(406..1287)
                     /gene="yddG"
                     /locus_tag="JQ356_001664"
     CDS             complement(406..1287)
                     /gene="yddG"
                     /locus_tag="JQ356_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415990.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid efflux DMT transporter YddG"
                     /protein_id="HAY4621794.1"
                     /translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS
                     GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATRHQAIEAGMVNYLW
                     PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGENGLHYDEIINNITTSPLSYF
                     LAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTQQPEMVFSTPVMIK
                     LISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGA
                     LMVCGGSLLCWLATRRG"
     gene            1519..4566
                     /gene="fdnG"
                     /locus_tag="JQ356_001665"
     CDS             1519..4566
                     /gene="fdnG"
                     /locus_tag="JQ356_001665"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:2104..2106,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY4621795.1"
                     /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
                     EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
                     NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
                     TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIAVDPRFTRTASVADIYAPIR
                     SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
                     KSSWNYQFDENGYAKCDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE
                     VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLAGQVNYWSNYPKFFVSL
                     MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
                     NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
                     SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
                     KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
                     GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
                     QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
                     LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
                     QPEQFVEISETLAAAKGINNGERVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
                     PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
     gene            4579..5463
                     /gene="fdxH"
                     /locus_tag="JQ356_001666"
     CDS             4579..5463
                     /gene="fdxH"
                     /locus_tag="JQ356_001666"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY4621796.1"
                     /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
                     CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
                     CEAPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC
                     TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG
                     VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY
                     IGIGPNKEVDDDEEDHHE"
     gene            5456..6109
                     /gene="fdnI"
                     /locus_tag="JQ356_001667"
     CDS             5456..6109
                     /gene="fdnI"
                     /locus_tag="JQ356_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit gamma"
                     /protein_id="HAY4621797.1"
                     /translation="MSKSKMIVRTKFIDRVCHWTVVICFFLVALSGISFFFPTLQWLT
                     QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK
                     VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
                     ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
     gene            complement(6160..6444)
                     /locus_tag="JQ356_001668"
     CDS             complement(6160..6444)
                     /locus_tag="JQ356_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY4621798.1"
                     /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG
                     KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ"
     gene            complement(6590..7600)
                     /gene="adhP"
                     /locus_tag="JQ356_001669"
                     /pseudo
     CDS             complement(6590..7600)
                     /gene="adhP"
                     /locus_tag="JQ356_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415995.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
     gene            complement(7734..9431)
                     /locus_tag="JQ356_001670"
     CDS             complement(7734..9431)
                     /locus_tag="JQ356_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HAY4621799.1"
                     /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
                     LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
                     IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
                     IDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
                     VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFM
                     VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
                     WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
                     LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
     gene            complement(9588..9725)
                     /gene="sra"
                     /locus_tag="JQ356_001671"
     CDS             complement(9588..9725)
                     /gene="sra"
                     /locus_tag="JQ356_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HAY4621800.1"
                     /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE
                     K"
     gene            complement(9827..10042)
                     /gene="bdm"
                     /locus_tag="JQ356_001672"
     CDS             complement(9827..10042)
                     /gene="bdm"
                     /locus_tag="JQ356_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310112.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HAY4621801.1"
                     /translation="MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            10388..10819
                     /gene="osmC"
                     /locus_tag="JQ356_001673"
     CDS             10388..10819
                     /gene="osmC"
                     /locus_tag="JQ356_001673"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin OsmC"
                     /protein_id="HAY4621802.1"
                     /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK
                     GTNPEELIGAAHAACFSMALSFMLGEAGFTPTSIDTIADVSLDKVDAGFAITKIALKS
                     EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS"
     gene            complement(10875..11801)
                     /locus_tag="JQ356_001674"
     CDS             complement(10875..11801)
                     /locus_tag="JQ356_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY4621803.1"
                     /translation="MSDTLLTLRGVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET
                     LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
                     ITEPLWIAKRSSEQQRRALVEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
                     PDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL
                     GQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF
                     YERCPLATSGCEVRQSLAIREDGRELRCWRAL"
     gene            complement(11794..12780)
                     /locus_tag="JQ356_001675"
     CDS             complement(11794..12780)
                     /locus_tag="JQ356_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY4621804.1"
                     /translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES
                     GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPM
                     TALNPTRRIGLQMMDVIRHHQPISRREARAKAIVLLEEMQIPDAVEVMSRYPFELSGG
                     MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA
                     VVSQLCDSVYVMYAGSVIESGVRADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGT
                     VPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV"
     gene            complement(12777..13673)
                     /locus_tag="JQ356_001676"
     CDS             complement(12777..13673)
                     /locus_tag="JQ356_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D,D-dipeptide ABC transporter permease"
                     /protein_id="HAY4621805.1"
                     /translation="MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLML
                     LMMFFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV
                     VVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAM
                     LAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQA
                     SLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPRAAILLTAV
                     GFNLFGDGIRDLLDPKAGGKQS"
     gene            complement(13670..14692)
                     /locus_tag="JQ356_001677"
     CDS             complement(13670..14692)
                     /locus_tag="JQ356_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4621806.1"
                     /translation="MTFWSILRQRCWGLVLVMAGVCVITFIISHLIPGDPARLLAGDR
                     ASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLE
                     LAFCALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGH
                     LQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGI
                     VARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYG
                     AVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI
                     GRGGGE"
     gene            complement(14694..16244)
                     /locus_tag="JQ356_001678"
     CDS             complement(14694..16244)
                     /locus_tag="JQ356_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY4621807.1"
                     /translation="MKRSIPFRPTLLALVLATTFPVAHAAVPKDMLVIGKAADPQTLA
                     PAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDN
                     AKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFL
                     YTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYP
                     GNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLR
                     VTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATA
                     MQYNHDETKAKAEWDKVTSKPTSLTFLYSDKDPNWEPIALATQSSLNKLGINVKLEKL
                     ANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL
                     LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQV
                     FNINTMSK"
     gene            complement(16258..16839)
                     /gene="ddpX"
                     /locus_tag="JQ356_001679"
     CDS             complement(16258..16839)
                     /gene="ddpX"
                     /locus_tag="JQ356_001679"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HAY4621808.1"
                     /translation="MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK
                     DAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT
                     AIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
                     SEWWHFELPQAASYPLLADQFTCFISPGTQHVS"
     gene            complement(17097..19412)
                     /gene="dosP"
                     /locus_tag="JQ356_001680"
                     /gene_synonym="pdeO"
     CDS             complement(17097..19412)
                     /gene="dosP"
                     /locus_tag="JQ356_001680"
                     /gene_synonym="pdeO"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-sensing cyclic-di-GMP phosphodiesterase"
                     /protein_id="HAY4621809.1"
                     /translation="MKLTDAENAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL
                     WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGKVYYLALVRDASVEMA
                     QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP
                     EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS
                     DITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHW
                     ASSSHGAEVQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALA
                     LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS
                     LGYAWADQALLEVVNRFRGKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVV
                     SKPIMIDDKPFPLTLSIGISYDVGKNHDYLLSTAHNAIDYIRKNGGNGWQFFSPAMNE
                     MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPQHGHVPPSRF
                     IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSD
                     AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV
                     SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI
                     HCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI"
     gene            complement(19437..20818)
                     /gene="dosC"
                     /locus_tag="JQ356_001681"
                     /pseudo
     CDS             complement(19437..20818)
                     /gene="dosC"
                     /locus_tag="JQ356_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310122.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DosC"
     gene            complement(21190..22509)
                     /locus_tag="JQ356_001682"
     CDS             complement(21190..22509)
                     /locus_tag="JQ356_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HAY4621810.1"
                     /translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
                     PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
                     INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
                     NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
                     IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIT
                     KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
                     YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
                     GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS"
     gene            complement(22640..24175)
                     /gene="gadC"
                     /locus_tag="JQ356_001683"
     CDS             complement(22640..24175)
                     /gene="gadC"
                     /locus_tag="JQ356_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance gamma-aminobutyrate antiporter
                     GadC"
                     /protein_id="HAY4621811.1"
                     /translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
                     FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
                     FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
                     FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
                     ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
                     VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
                     NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
                     VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
                     VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
                     KKH"
BASE COUNT         6083 a         6127 c         6142 g         5985 t
ORIGIN      
        1 acgcttatca ttagtaaaat aacgtagagc ggtaaccttg ccataaaggt cgagtttatt
       61 accatccttg ttatagactt cggcagcgtg tgctacgttc gcagctaaca aaccagttac
      121 aaccaccgca actattttta atttcattta acagaatcct tttaattatc gtcaaacgta
      181 ttttctaaac gaattttaaa cggcgtcatt tataaatgac atactgtttt taaaatagaa
      241 tggtgattaa aaacaatgag aaaaatagat gagataatat tatttatcga tatgtgatcg
      301 aagtcgaaat gagatataag gtgaattact ggtatttgaa atttattttt taatattgtc
      361 ggaatttatc tgattaactg ccgggccgta gacccggcaa ttattttaac cacgacgtgt
      421 cgccagccag cagagcaggg aaccgccgca gaccattagc gcgccttgcc agaatgagaa
      481 cgacagcggg gcgctgagca gcacggctgc aagcgctgag gaaagtacgg gcgtaaaata
      541 cgagcctacc gccattatgg tgacattgcc atgcaatata ccgacattcc atgcagcata
      601 agcaaatcct aaggtaaatg ccgcagagat gagtttaatc atgacgggcg tgctaaatac
      661 catttctggt tgttgcgtaa gaaaatagta aacccacaga cttgctcccg ttagcaggac
      721 aaaaacggta attccgttaa atccgcgtgc gtatttattc gttactgtgc aataggctgc
      781 ccagataaac gcaccaataa acgccaggaa ataactcaat gggctggtgg tgatattatt
      841 gatgatttca tcataatgta acccattctc accgcctaac acccagcaga cgccgaccag
      901 ggctaataat aatcctggta caatcagcca gttggttttc tgaccattaa acagaatggc
      961 aaagagaatt gtcaggctgg gccacagata gttcaccata cccgcttcaa tcgcctgatg
     1021 acgggtcgcc gcatacccta aggaaagcgc cagacagatt tcatagctga cgaataacag
     1081 actcccggcg agtaaatagc ctttcggaat ctgccgaata cgcggaaatc caaccgtgaa
     1141 gattaacagc agcccgctta atgaatagat agcagctgcg ccgccgaccg ggccgagccc
     1201 ctcgctgaca ccgcgaatca atcctaccat cgtgctccac aggacgatcg ctattagccc
     1261 tatgagcgtt gctttttgtc gtgtcatgct cgctgttttg tctctcttgc cgttaaaaat
     1321 taagctgaat tttatagcat ttttttaact ggcctgtcag gcagtggtgc gtttttctac
     1381 cgctattgag gtaggtcaat ttgcgcaggc ggattatttt gtggcaaaca cgtgttcttt
     1441 ttgatttcgc gcaaaaagat tcagaatttt actgttagtt tcctcgcgca gtaatatccc
     1501 tgaaaaaaga ggaaagcaat ggacgtcagt cgcagacaat tttttaaaat ctgcgcgggc
     1561 ggtatggctg gaacaacggt agcggcattg ggctttgccc ctaagcaagc actggctcag
     1621 gcgcgaaact acaaattatt acgcgctaaa gagatccgta acacctgcac atactgttcc
     1681 gtaggttgcg ggctattgat gtatagcctg ggtgatggcg cgaaaaacgc cagagaagcg
     1741 atttatcaca ttgaaggtga cccggatcat ccggtaagcc gtggtgcgct gtgcccaaaa
     1801 ggggccggtt tgctggatta cgtcaacagc gaaaaccgtc tgcgctaccc ggaatatcgt
     1861 gcgccaggtt ctgacaaatg gcagcgcatt agctgggaag aagcattctc ccgtattgca
     1921 aagctgatga aagctgaccg tgacgctaac tttattgaaa agaacgagca gggcgtaacg
     1981 gtaaaccgtt ggctttctac cggtatgctg tgtgcctccg gtgccagcaa cgaaaccggg
     2041 atgctgacac agaaatttgc ccgctccctc gggatgctgg cggtagacaa ccaggcgcgc
     2101 gtctgacacg gaccaacggt agcaagtctt gctccaacat ttggtcgcgg tgcgatgacc
     2161 aaccactggg tggatatcaa aaacgctaac gtcgtaatgg taatgggcgg taacgctgct
     2221 gaagcgcatc ccgtcggttt ccgctgggcg atggaagcga aaaacaacaa cgatgcaacc
     2281 ttgatcgctg tcgatcctcg ttttacgcgt accgcttctg tggcggatat ttacgcacct
     2341 attcgttccg gtacggacat tacgttcctg tctggcgttt tgcgctacct gatcgaaaac
     2401 aacaaaatca acgccgaata cgttaaacat tacaccaacg ccagcctgct ggtgcgtgat
     2461 gattttgctt tcgaagacgg cctgttcagc ggctacgacg ctgaaaaacg ccagtatgat
     2521 aagtcgtcct ggaactatca gttcgatgaa aacggctatg caaaatgcga tgaaacactg
     2581 actcatccgc gctgtgtgtg gaacctgctg aaagcgcacg tttcccgcta cacgccggac
     2641 gtcgttgaaa acatctgcgg tacgccaaaa gccgacttcc tgaaagtgtg tgaagtgctg
     2701 gcctccacca gcgcaccgga tcgcacaacc accttcctgt acgcgctggg ctggacgcag
     2761 cacaccgtgg gtgcgcagaa catccgtact atggcgatga tccagttgct gctcggtaac
     2821 atgggtatgg ccggtggcgg cgtgaacgca ttgcgtggtc actccaacat tcaggggctg
     2881 actgacttag gtctgctctc taccagcctg ccaggttatc tgacgcttcc gtcagaaaaa
     2941 caggttgatt tgcagtcgta tctggaagcg aacacgccga aagcgacgct ggctggtcag
     3001 gtgaactact ggagcaacta tccgaagttc ttcgttagcc tgatgaaatc tttctatggc
     3061 gatgccgcgc agaaagagaa caactggggc tatgactggc tgccgaagtg ggaccagacc
     3121 tacgacgtca tcaagtattt caacatgatg gacgaaggca aagtcaccgg ttatttctgc
     3181 cagggcttta acccggttgc gtccttcccg gacaaaaaca aagtggtgag ctgcctgagc
     3241 aagctgaagt acatggtggt tatcgatccg ctggtgactg aaacctctac cttctggcag
     3301 aaccacggcg agtcgaacga tgtcgatccg gcgtctattc agactgaagt attccgtctg
     3361 ccttcgacct gctttgccga agaagatggt tctatcgcta actccggtcg ctggttgcag
     3421 tggcactgga aaggtcagga cgcgccgggc gaagcgcgta acgacggcga aattctggcg
     3481 ggtatctacc atcatctgcg cgagctgtac caggccgaag gtggtaaagg cgtagaaccg
     3541 ctgatgaaga tgagctggaa ctacaagcag ccgcacgaac cgcaatctga cgaagtggct
     3601 aaagagaaca acggctacgc gctggaagat ctctatgacg ctaatggcgt gcttattgcg
     3661 aagaaaggtc agttgctgag tagctttgcg catctgcgtg atgacggtac aaccgcatct
     3721 tcttgctgga tctacaccgg tagctggaca gagcagggca accagatggc taaccgcgat
     3781 aactccgacc cgtccggtct ggggaatacg ctgggatggg cctgggcgtg gccgctcaac
     3841 cgtcgcgtgc tgtacaaccg tgcttcggcg gatatcaacg gtaaaccgtg ggatccgaaa
     3901 cggatgctga tccagtggaa cggcagcaag tggacgggta acgatattcc tgacttcggc
     3961 aatgccgcac cgggtacgcc aaccgggccg tttatcatgc agccggaagg gatgggacgc
     4021 ctgtttgcca tcaacaaaat ggcggaaggt ccgttcccgg aacactacga gccgattgaa
     4081 acgccgctgg gcactaaccc gctgcatccg aacgtggtgt ctaacccggt tgttcgtctg
     4141 tatgaacaag acgcgctgcg gatgggtaaa aaagagcagt tcccgtatgt gggtacgacc
     4201 tatcgtctga ccgagcactt ccacacctgg accaagcacg cattgctcaa cgcaattgct
     4261 cagccggaac agtttgtgga aatcagcgaa acgctggcgg cggcgaaagg cattaataat
     4321 ggcgagcgtg tcactgtctc cagcaagcgt ggctttatcc gcgcggtggc tgtggtaacg
     4381 cgtcgtctga aaccgctgaa tgtaaatggt cagcaggttg aaacggtggg tattccaatc
     4441 cactggggct ttgagggtgt cgcgcgtaaa ggttatatcg ctaacactct gacgccgaat
     4501 gtcggtgatg caaactcgca aacgccggaa tataaagcgt tcttagtcaa catcgagaag
     4561 gcgtaagggg gcgaacagat ggctatggaa acgcaggaca ttatcaaaag gtccgcaact
     4621 aactccatca cgccgccttc tcaggtgcgt gattacaaag cagaagtcgc aaaacttatc
     4681 gacgtttcca cctgtatcgg ctgtaaagcc tgtcaggtgg cgtgttcgga gtggaacgac
     4741 atccgtgatg aagtggggca ctgcgtcggg gtttacgata accccgccga tctgagcgcc
     4801 aagtcctgga cggtgatgcg ctttagcgaa accgaacaga acggcaagct ggagtggctg
     4861 atccgtaaag acggctgtat gcactgtgaa gctcccggct gcctgaaggc gtgcccgtct
     4921 gctggtgcaa tcattcagta cgctaacggg attgtcgatt tccagtcgga aaactgcatc
     4981 ggctgtggtt actgcattgc cgggtgtccg tttaatattc cgcgcctcaa caaagaggat
     5041 aaccgggtat ataaatgcac gctctgcgtc gatcgcgtca gcgtcggcca ggaaccggct
     5101 tgtgtgaaaa cctgtccgac cggggctatc cacttcggca ccaagaagga gatgctggag
     5161 ctggcggaac agcgcgtggc gaaactgaaa gcgcgtggtt acgaacatgc tggcgtctac
     5221 aacccggaag gggtcggtgg tacgcacgtt atgtacgtgc tgcatcacgc cgatcagccg
     5281 gagctgtatc acggtctgcc gaaagatccg aagatcgaca cctcggtaag cctgtggaaa
     5341 ggcgcgttga aaccgctggc agcggctggc tttattgcca cttttgccgg gttgattttc
     5401 cactacatcg gtattggccc gaataaggaa gtggacgatg acgaggagga tcatcatgag
     5461 taagtcgaaa atgattgtgc gcaccaaatt tattgatcgc gtctgtcact ggaccgtggt
     5521 gatttgcttc ttcctggtgg cgctgtccgg gatttcgttc ttcttcccga cgctgcaatg
     5581 gctgacgcaa accttcggta cgccgcagat gggacgcatt ttgcacccgt tcttcggcat
     5641 tgcgattttc gtcgcgctga tgtttatgtt tgtgcgtttt gtgcatcaca acatcccgga
     5701 taagaaagat attccgtggc tattgaacat tgtcgaagta ttaaaaggca atgagcacaa
     5761 agtggcggat gttggtaagt acaacgccgg gcaaaagatg atgttctggt cgatcatgag
     5821 catgattttc gtgctgttgg tgaccggggt gattatctgg cgtccgtact ttgcgcagta
     5881 cttcccgatg caggttgttc gctacagcct gctgatccac gcggctgccg gtatcatcct
     5941 gatccacgcc atcctgatcc atatgtatat ggcattctgg gtgaaaggat cgattaaagg
     6001 gatgatcgaa gggaaggtaa gccgtcgctg ggcgaagaaa caccatccgc gctggtatcg
     6061 tgaaatcgag aaggcagaag cgaaaaaaga gagtgaagaa gggatataat ctcttttgaa
     6121 ctttaagctg aaaatggcgc tttaagaagc gccatttttt tattgcgtaa ccagacggcg
     6181 cagtcgcgac acatccaccg ttttttcagc ctctgccaga ctccaggcgt tttgcagatt
     6241 cagccacatt tgcggcgaac tgccgatcac cacggaaagt ttaattgcca tttctggcgt
     6301 caaagctgct tttccggtca gcaatcggct tgccgttgag ggcgcaattt ccattgctct
     6361 ggcaaactcg cgcaggctga cattaagttc gtccagtgat tcctgaataa tgtcccccgg
     6421 gcggggatga ttggccattt tcattagtgt ctttactctc agtagcgttc cttctctggg
     6481 aacactatca ttattgttcc ttcctacgca acaataatcc atttagccat ttcatgttgg
     6541 agagtgtgcg atgctgcgac ccgaacatgg gagtcgcagc aaagacctct tagtgacgga
     6601 aatcaatcac catacggcca cggattttgc cttcttccat ctcggtaaag atggtgttga
     6661 tgtccgctaa cggacgcagg gcgactttcg gcaccacttt gccttcggcg gcaaactgga
     6721 aggcttcggt tagatcctgg cgcgtgccga ccagcgaacc gaccacttca atgccatcca
     6781 gcacaagacg tgggatatcc aggctcatag actccggcgg cagaccgaca gccacaacac
     6841 gaccgcctgc acggacagca tcaactgccg agttaaacgc agctttagct actgctgtta
     6901 ccaccgcagc gtgagcgcca ccggttttct cctgcacaat ttaggcggcg tcttcggtgc
     6961 gtgagttaat cgctaaatct gcacccattt cggttgccag ttttaactgc tcatcattga
     7021 catcaatggc gatcactttg gcgttaaaga cattcttcgc gtattgcagg gcgaggttac
     7081 ccagaccgcc aagaccgtag atagcaatcc actgaccggg acgaattttt gacagtttaa
     7141 cggctttgta ggtggtgacc cccgcacagg taatgctgct ggccgccgcc gagtccagac
     7201 catctggcac ttttaccgcg taatcggcga ccacgatgca ctcttccgcc atcccgccat
     7261 caacgctgta tccggcattt ttaactgaac ggcagagcgt ttcgttacca ctgttacagt
     7321 attcgcaatg accgcatcct tcgtaaaacc acgccacgct ggcacgatcg cctggtttta
     7381 atgaggtgac acctgggcca acttctgcca ccacaccgat gccttcatgg cccagaatta
     7441 ccccagtttt gtcaccaaaa tcgccattct taacatgaag atcggtatga catacaccac
     7501 aacactccat tttcagcagg gcttcgccat gtttcagtga gcgcagtgtt ttatccgtaa
     7561 cgtcaacatg atgatccttc gtaacaactg cagccttcat agttcctcct tttcggatga
     7621 tgttctgcat agcaggtgag gcaaatgaga tttattcgcc actacccagt atggatgaga
     7681 tctgaaaaag ggagagggaa atagcccggt agccttcact accgggcgca ggcttagatg
     7741 gaggtacggc ggtagtcgcg gtattcggct tgccagaaat tatcgtcaat ggcttgttgc
     7801 aaagcttcag cagacgtttt caccgccacg ccttgctgct gcgccatttt gccaaccgca
     7861 aacgcaattg cgcgggagac tttctgaata tctttcagtt ccggtagtac cagaccttcg
     7921 ccgttcagca ccagcggcga atactgagca agcgtttcac ttgctgacat cagcatctca
     7981 tcggtgatac gtgacgcgcc ggaagcaata acacccagcc cgatgccagg gaaaataaag
     8041 gcgttgttac actgggcgat agggtagatt ttatctttcc ataccactgg attaaacggg
     8101 ctgccagtgg cgaccagcgc gttaccttcg gtccaggcga taatgtcctg cggtgtggct
     8161 tccacgcgtg acgtcgggtt agacagcggc atcacgatcg gacgcggaca gtgtttatgc
     8221 atctcacgga tgatctcttc cgtaaacagc ccggtctgtc ctgagacgcc aatcagaata
     8281 tctggtttta cattgcgcac cacatccagc agtgacagca catcgctgtc ggtatcccag
     8341 tcactgaggt tttcgcgttt ctgcaccagt ttggtctgga aaggcagcag gttcggcatc
     8401 ttgtccgtca gcaggccaaa gcgatcgacc ataaagactt tctgccgcgc cgcttcctcg
     8461 cttaatcctt cgcgctgggt ctgggcgatg atcatttcgg caatgccgca tcccgctgaa
     8521 cctgcaccaa ggaagacgat ttttttctcg cttaactgac cacctgccgc tcggcttgct
     8581 gcgatcagtg tgccgactgt taccgccgca gtgccctgaa tgtcatcgtt aaaagaacaa
     8641 atttcattgc gatagcggtt aagtaacggc atcgcatttt tttgagcaaa gtcttcaaac
     8701 tgcaacagca cgtctggcca gcgttgtttc acagcctgga taaattcatc aacgaattca
     8761 tagtattcgt cgtcaatgat acgcggatta cgccagccca tatacagcgg atcgttaagc
     8821 agctgttggt tgttcgttcc gacatccagc accaccggaa gggtatacgc cgggctgatg
     8881 ccgccacagg cggtatagag cgacagttta ccgatcggaa tgcccatccc gccgatgccc
     8941 tggtcaccaa gccccagaat acgttcaccg tcagtcacca caatcacttt gatattatgg
     9001 ttcggtacgt tttgcagaat atcgtccata ttgtggcggt tctggtaaga gataaacacg
     9061 ccgcgtgaac ggcggtagat ctcagaaaaa cgctcacagg ctgcgccgac ggttggggta
     9121 taaataacag gcatcatctc atcaagatga ttgtttacca gacggtagaa gagggtttcg
     9181 ttggtgtcct ggatgttacg caggtagatg tgtttgtcga tttcggtttt gaatccctga
     9241 tactggatcc atgctcgttc cgcttgttct tcgatggttt cgaccacttc cggcagtaac
     9301 cccagcaggt tgaagttacg gcgttcttcc atgctgaagg cactgccttt attcaacaac
     9361 ggaaattcca gcagtacagg gccagcgtaa gggatataaa gcgaacgctg tttttttgtt
     9421 tttggttcca tgtcactcac tcttttttga atatccatcc ctggcacgct tttatcgtct
     9481 ttgctttacc gccagggcgt cggccccaag tataaagcag ataaaaacaa aaacaccatt
     9541 gcgcaggcaa tggtgtttaa tcgtcattga ggactgatgg ttatgaatta cttttcagcg
     9601 gggcgttttc tgccggttgg gttatttacc acgctggatt tgtcaccttc ggtaactatt
     9661 ttgcgctggt tagaaatttt atggtccagt ccaagaatat gacgtgcctg acggttcgat
     9721 ttcattttaa ctcctcaatc ctgttgctag ttttaaggac aacatcgccg tagcgaagaa
     9781 acacgtgcta aacccctaaa ttaggttgcc gatcaagcat agcaccttaa agcgtagggt
     9841 gctggccact gaccacataa ttgatcgttt gctggtagat atcactgagg atgtcgttat
     9901 cagaagcttc cacccatttg gtcagctcca tgagaatgtc atcttcagtg acaacaccgt
     9961 gctctgcccg aaggccttgc tcaatggcat taaccagagc gggttctgct gttgaatttt
    10021 ctgcctgata ataagtaaac atagtgattc tccgtgtctg tgtatttatg gtgtctgcta
    10081 cggatcgcag atttataaag cacattcagc atggcaaata tttgccgctt tgttgttaag
    10141 attagtcctg gttgatgatt tttatatttt aacctcatga tattgatagg tattattatt
    10201 gtggtgagtt gattaatatt aatgcaatat ctcttgggtt atatattccc ggttatctat
    10261 tgtggaaatt taatttaagt gcagaagtaa tatttctgcc ggatttttat tcggaatatc
    10321 ctgcttatcc tcgtgctgtt tctcacgtag tctataattt cctttttaag cccacatgag
    10381 agcaacaatg acaatccata agaaaggtca ggcacactgg gaaggcgata tcaaacgcgg
    10441 gaagggaaca gtatccaccg agagtggcgt gctgaaccaa cagccgtatg gatttaacac
    10501 gcgttttgaa ggcgaaaaag gaactaaccc tgaagaactg attggcgcag cgcatgccgc
    10561 atgtttctca atggcgcttt cattcatgct gggggaagcg ggatttacgc caacatcgat
    10621 tgataccatc gccgatgtgt cgctggataa agtggatgcc ggttttgcga ttacgaaaat
    10681 cgcactgaag agtgaagttg cggtgccggg tattgatgcc tctacctttg acggcatcat
    10741 ccagaaagca aaagcaggat gcccggtctc tcaggtactg aaagcggaaa ttacgctgga
    10801 ttaccagttg aaatcgtaaa gcattgccgg atgacgtgtc aggcgcgtga atgcctgatg
    10861 cgttgttagc atctctacag cgcccgccag caccggagct cacgtccgtc ctcccttatt
    10921 gctaatgatt gccggacttc acatccgctg gttgcaaggg ggcaacgttc gtagaaaaaa
    10981 cagccttgcg gcaacgtgcg gtttcccggc agatccgttt tacgtaatgc ccattcttcc
    11041 tccagcggtt tatcaatggc ggggagggaa tccagcaata atcgggtgta tggatgtgcc
    11101 ggagccgtta gcacctgttg cgcgtcgccc agttctacaa tctgcccgag atacatcacc
    11161 gccacccgat cgctcatatg acgtatcacc gagacattgt gtgaaatcag cacataggtc
    11221 agcccgtgat tttcctgtag cgttaccagt aaattgagga tctgcgcctg cacggagata
    11281 tccagcgcag aggttggctc atcaagcaca atcacgtcag gctgcgaaga gagtgctctg
    11341 gcaatggcga tacgttgccg ctgcccgccg gagaacgcat gaggcaggcg gtcgagatac
    11401 tccggacgaa tacccacctg cacagccagc tcctctacca acgctcgccg ctgttgttca
    11461 ctactacgct tagctatcca gagcggttct gtgatgatgc gccacaccgg taagcgcgga
    11521 ttgagcgaag agagcgggtc ctgaaacacc atctgcataa tgcgttgtga gccagaacgg
    11581 atgtactgcc cgtggctcgg ttgcagcata cccattaaaa gctgtgcgag ggtgcttttg
    11641 ccgcagcctg actcgccgac gatccctaag gtttcaccac ggcggatctg taaatcaata
    11701 ccattaatcg catgaacatg ttccgtagtt ttaccaagcc agtttttacg ggccgggaaa
    11761 ttgatatgga cgccgcgtaa cgttaataac gtgtcagaca cttatgacct cctgctgcgg
    11821 ataccaacag gcgcagcgct ggttgttgtc accacacgct gtcagcgccg ggacgttttc
    11881 acactgtgca cctgccgcat agcaacgatc gcgaaaagcg cagccgtcag gcaaatgggt
    11941 gaggtttggt accgtccctg gaatggcggg taatagctgg cgtggtactc catgttctgg
    12001 tgcacattgg agcaaaccaa tggtatacgg atgccgggga tgatggataa cgtctgccct
    12061 cacgccgctt tcaattacgc ttccggcata catcacgtaa acgctatcgc acagttgcga
    12121 caccacggcc atatcatggc tgatgaacag aaccgcagtt ccactggcgc gggctttatg
    12181 tttaagcaaa cgcagtacct gcaactgcac cgtgacgtcc agcgccgtag tcggttcgtc
    12241 ggcaataatc aattgcggct cgcaggagaa tgccagcgca atcattaccc gctggcgcat
    12301 accacctgaa agctcaaacg gatagcgcga cataacttcc acggcatccg ggatttgcat
    12361 ctcttccagc aggacaatcg ctttagctct ggcttcccga cgacttattg gttgatgatg
    12421 gcggatcacg tccatcatct gaagacctat tcgacgtgtc ggattgaggg cggtcatcgg
    12481 ttcctgaaag atcatcgcca ctcgtgcgcc gcgccactga cgaagctgtt tttcccgagc
    12541 gttaagaaca tcgtctccca gcagtgaaat ctgcccccga tgtacgcaat aactgcccgt
    12601 cggtagcaga cgcataatca gcattgcggt gactgattta cctgagccgg attctcccac
    12661 cagaccgaca atttcaccgc ggttaatctg caaggacaca ttgttgagcg cgtgaacatc
    12721 accgttaaaa ccggggaaac tcaaatgcag ctgttgaatg tccagaacgg gctgggtcat
    12781 gactgctttc ctcctgcttt cgggtcaagc agatcgcgaa taccatcacc aaagagatta
    12841 aacccaacgg cggtaagcaa aatcgctgcc cttggaaatg cgcaatacca ccactgatcg
    12901 agtacatagt tgcgaccatt cgctaccatc gcgccccatt cagcactcgg ttgttgagca
    12961 cccaggccaa taaatcccaa cgtggcggcc attaaaatcg cgctaccgat atccagcgat
    13021 gcctgcacga tcagcggcgg cagggagtta cgtaaaatat gccagctgat cagatgccaa
    13081 cgcgacgcac caaaggtttt cgccgcctga acataggtat actggcgtac aactaatgct
    13141 tgcccccgcg ccaggcgcac ataaaaggga attcgcacaa tagcaatcgc cagcatggcg
    13201 ttaaataaac tcggcccgag agcggcagcc agtgccattg tcagtaccaa cgaaggaatc
    13261 gacagcataa tgtccatgat gcgcatgatg atggcgtctg cgcgtccgcc aagcacaccg
    13321 gatagacatc cgagtagcga accaatcata cccgcaatgg caaccacgac taatccggcg
    13381 agaattgatt gctgactgcc gaccagtacg cggctgaaca gatcgcgtcc cacttcatcg
    13441 gtgccaaacc agtgcgccgc agaaggcggc aaaaggcggg cggttaaatc aatggcgttg
    13501 ggatcatgcg tcgcaagcca cggtgaaaaa aacatcatca atagcattaa tacaatgatg
    13561 actgcgccgg tcacggtgag cggactgcct ttcagcatcc ataccagttt tgcaccgtta
    13621 aatcgcgttt gtttttgtgg gcgtacggcg gacgtttcct cgcttagcat cattcaccac
    13681 ctccacgtcc gatacgcgga tcaatccaca aatagagcaa atccaccacc aggttgacca
    13741 gcacataagc aaatgaaacc acgacggcaa agcccatcac tgccgggaag tcgagcgcct
    13801 gtattgatgt tactacccat gcacccattc cgggccaggc aaaaacggtt tcggtgagca
    13861 ctgcgccata caacaaatcg cccagcgcca gacccaatac ggtaatcgat gggatcaacg
    13921 cattgggtag cgcataacat aaaacgatat accagccggg caagccgctg gcccgggcgg
    13981 tacgaatgta gtcttcactc aattgttcca gcatcgctga gcggatctgg cgagcgacaa
    14041 ttcccaggtg aacgaacgcc agcgttaatg ccggtaagat gagatgttgc aacgcattga
    14101 agaagacttc accgttgcct tcaagcagcg catcgagcag ataaaagccg gtaacgtgcg
    14161 ttggtggatc cagccagtca tcaagccttc cgccgccggg aagaatttgc agatgaccat
    14221 aaaacagcac aatgacgccc agtccaagcc aaaacgcagg tgtggagatt ccggtaatgg
    14281 ccattattcg caccagatga tccagccagc gatttcgcca gactgcagag agtatgccca
    14341 gcgggatgcc aatcaggagt gccagcagca gggcacaaaa agccagttcc agcgtcgccg
    14401 ggaaaaatat acgcaactct tccaacaccg gacgcccggt acgaatggat gttcccaggt
    14461 caccatgaaa caggtcgctg acgtagcggt aaaactgtac atacagtggc tggtccagtc
    14521 ccagttgctg gcgaatattt tccacgatag catcgctggc gcggtcaccc gccagtaacc
    14581 gcgccggatc gccagggatc agatgcgaga taataaacgt aatcacgcag acgcccgcca
    14641 tcacgagcac cagcccccag cagcgttggc gtaaaatact ccagaaggtc acgttattta
    14701 ctcatggtat tgatattgaa gacctgttcc agcatgggat tgaacacaaa gcctttcacc
    14761 tctttgttca tcgccagttg gtagtttttc tggaacaggt acacataagc agcgtcatca
    14821 atgacgattt tctgtgcctg ctggtagtcc cgggtacgct gcgtctggtc ggtggtcgca
    14881 agcgcattgc gcagtaactt atcgacctca ctgttttcat agaacgagcg gttacccggc
    14941 agaccttttt tgtctgactc aaaccagtaa ttcataaaca tatacgggtc ggcaaaatcc
    15001 ggactccagt tgccaatcgc aatgtcgtaa tcacctttac ccactctgtc gcgcatggtg
    15061 gcgttcgcca gcttttccag cttcacattg atgcccagct tgttgagact ggattgtgtc
    15121 gccagagcaa taggctccca gttcggatcc ttatcggagt agagaaacgt caggctggtg
    15181 ggtttgctcg tcactttatc ccattcggct ttggctttcg tttcgtcatg gttgtattgc
    15241 attgccgtcg catcgtagcc ccacatgcct tccggaatcg ggccgcgcat ctgttttccg
    15301 ttaccactca gaatgccgtt aaccatgccc tgataatcgg tagaccagga aatggcccga
    15361 cgcagatccg cctgattaag aggcgctttg ctgttattca gatacaggta ggtgacgcgc
    15421 agtgacggat actctgccac attgactttg ttttcctgct tcagggcgtt gagttgatcc
    15481 accggcagcg catcggcaat gtcaatatca ccacgggaga gctgcaggcg acgggaggca
    15541 ctttcaccaa taatttttac cgatactcgc ttaaagttcg gtttattgcc agggtaatgc
    15601 ggatttggca ccagaactaa ttgctgacct ttttgccagc ttttcagcat aaatggtccg
    15661 gaaccggcgg tattttgcgc gaggaagccg cgggcatcat ccgctgcatg ttcctttaac
    15721 accgccggat tgataatgga tgcaccgtca ttcgccagcg tgtagaggaa cggtgcgaat
    15781 ggctggctaa gggtaaactt caccgtatgt tcgtcgggag catcaatctt taaatctttg
    15841 ggaaatgctt ctgctggccc ctggccgatt tttagtagcc gctcaaaaga gagttttact
    15901 gcttcggcag tgaccggtgt gccatcggca aatttagcat tgtccttcag ggtgaacgtc
    15961 cactcttttt gatcgtcaga cgctttccag ctacttgcca gatcgccttc aacgtcggtt
    16021 gagcctttat caccgtccgt tttgtactga accagccgct gataagacgg gtaggtcacc
    16081 gtccagtcgt tattatctat tgttaccgcc ggggcgaggg tttgtggatc ggcggcctta
    16141 ccaatcacca gcatatcttt cggtacggcg gcgtgcgcaa ccgggaaagt tgtggcaagg
    16201 acgagcgcga gcaatgtagg acgaaacggt atcgatctct tcatgacagt ttcctgatta
    16261 actgacgtgc tgtgtgccag gggatataaa acaggtgaat tgatcagcga gcagtgggta
    16321 actcgctgcc tggggtaatt cgaagtgcca ccattcgctg gagataccga caaaaccgcc
    16381 accagtcata atcgcattca gcaacagccg attgcgctga gcggcgggcg ggacggaagg
    16441 gtgataggca tgggagcgct cgtgcatttc atcgaaccct gcgcccatat cgaggatgtt
    16501 cccgtgctca tcacgaagcg tcaggtcgat cgccgtgcca cggctgtgat tagaaccgac
    16561 cgtcacatca acaacatatt gcgggtctgg gcaggcttgc cacaacatcg cctgtgcttg
    16621 ttgtgggcga tacgcatcgt aaatcaccag ttgtaagcct gacagctggg cgatactgat
    16681 acttttcgcc agcgcggtaa tcgcatcctt gtgtagcaga caacgcgctt gctgataaat
    16741 agctttacct gtgatgttat cagcgcaggc gtatttcaat tcgatctcca gatcagggaa
    16801 gattacggct aaatcaacca gttcggtggt atccgacata aacggttcct gtataagaca
    16861 aaaattgctg cgctttccgc ttatgcagat ctcatgccat gccgggataa gcgccagaat
    16921 gctggcttaa agttatattt tttaactttt gatcaacatt tgtgcagcgt agtgcagttt
    16981 tggtgcaaga ggggaagtta aggaaggaat ctcccggaat cgtagatgaa atcacagtat
    17041 ttaagtgacg gtgtcacgtt aaatgaaaac ccgcgagtgc gggcgagagg aatttgtcag
    17101 attttcagcg gtaacacgct gctcatccag cctggaattt cttcggcggg tagggggcgg
    17161 gaaaagaaat atccctgaat aacgcgacag tggatcttgc gtagcatctc aaattgctct
    17221 ttggtttcga cgccttccgc cacgacggtt aaattgaggc tttgcccaat gctggtaatg
    17281 gcttcaagta aggcaaggat gcgtttttcg gtcagacaac gatcgacaaa acttttgtca
    17341 attttgattt ccgttaccgg aagactgact aagcgggata atccggaaaa gcccgtacca
    17401 aaatcatcta ccgataagcc cacgcccata tcacgcagga tctgaatgcg cttaaagatt
    17461 tcggtatcgt gttccatcat catgctttcc gtgatttcta ccgtcagctg gtggccgtca
    17521 ataccccagg cgtgcattgc atcagacacc tgattaggca gttgattact gcgaaagtgc
    17581 agtgccgaca agttaacgga aagcgccggg atatgaatat tctggctacg ccattctgct
    17641 aactgacggc aagcttccgc gatgacccag cgcccaatat tttcgatttc accaatctct
    17701 tctgcgagag gaataaaccg tgaagggggc acatgaccat gctggggatc gtgccagcgc
    17761 gcaagggctt cgatgccgta cagttcaccc gtttctgcga agatttgcgg ctggtaaaca
    17821 agtttcagtt ggttattgct aatcgcttct ttcagcgctg cgcctaaaac caaacgctct
    17881 tttaccattt cgttcatcgc cgggctgaag aactgccagc cgttaccgcc attcttgcga
    17941 atataatcta ttgcattgtg agcagtggag agtaggtaat cgtggttttt acccacgtcg
    18001 tagctgatgc caatactcaa ggtaagcggg aatggtttat cgtcaatcat tatcggcttg
    18061 ctgaccacat tccgtagctc atcggcgatc tgggtaatgt tactgacgtc gttttccagg
    18121 ctcacgagga caaactgcgt accttcgata cgacagagat actgatccgg tttgagtttt
    18181 ccacgaaagc gattgaccac ttccagcaat gcctgatcgg cccacgcata gccaaggcta
    18241 tcaatcacat cctgaatatg gtcaacaccg atgagataca ccaccggaga gacggctttg
    18301 tcgaccaggt catcgaggta attgtgcagg ttattgcgat ttggcagacc ggtcatcgga
    18361 tcaaattgga tgagttgttc aatatgctgg cggctttttt cctgttccag cgccagcgcg
    18421 gccatatgct gactgatatc tgccacgcgt tcgataaagg cgctggtttc tgctcctgac
    18481 gaggttttaa tttgcaggat ccccgcaggc gcgccatcac gctgacgaat ggtcgctgac
    18541 cagctttgcg cattttgaac ttctgcaccg tgcgaagatg acgcccagtg tatcggcatc
    18601 ccgttgcgca gtgcgaacag cgaaacatgc gattcgttga gaacagattc gatgttacga
    18661 caaatgattt cccccatttc atgaaatggc gggctgctgc acatggcggc gagaatattg
    18721 ccttcaagct ggcggatttg ccgttcttcg gtgatatccg agaaagtcat taccaggttc
    18781 tgcagatgcg cgagcacgtc ataaaccggg ctgatagagg ctttaatcca gattttttca
    18841 ccggtgcgcg tcaacagcag aaattcgtcc tgatcgcggg cggttttcca tagcaactgt
    18901 tgtaaacgaa tgcggttatc ggcagggaat tcaggaatgt tcaggagtgt atcgggctgc
    18961 ataccgctgg cttcgctaat gcagtaacca aacatttcgg taaatgcgcg attgcactgc
    19021 acaatatggc gttccggatc gaggacaatc accggtcggt cgagatggtc aacggcaata
    19081 atcaattgtc gggtctgttc tttttgcgcc atttctacgc tggcatcccg taccagcgcc
    19141 aggtaataaa ctttcccctc gacgcgcgct ttaccacctt cacggttatg acgaatgtat
    19201 tcaggatgcg caggacgcaa atcccgcgga atcagcatat caatgttatt gccaatgact
    19261 tcttcacgtt tgtaccccca gagcttctct gcggcggggt tgaaaaacat cacttcatca
    19321 ttttcgttaa ttaacaccgc gcccatcata ttttgttcaa gggcggggaa aaaaatgcca
    19381 tcggcggcat tttccgcatc ggttagcttc atgattacct ctgcatcctg gcgcatctaa
    19441 agactggctt tccagagttc aacacggttt ctacctcgtc ttttggcgat atacagagct
    19501 tcatcggcta tttgaatgag gcgctcatag tcaggatgac cattaaacat ggcggcaccg
    19561 atggaaagtg agagggcaat atcctcgccg tttgcggctt tcagtttggt tttctccacc
    19621 cgactgcgaa tacgttctgc ggtacgtaac gtttcgtttt cagaagcttc agtcaaaaca
    19681 atgataaatt catcgccccc gtagcgaaaa acataatcac tactgcggac gttgtcataa
    19741 aaggcctgag agactttacg cagaatttca tcgccagtgt tatggcccca cgtatcgttg
    19801 atctctttga atttatcaac gtcaataatc agcactgaca gcggtgtacc ggtccggttg
    19861 gcatgggcaa tttcgcgttt gaagatagtc ggcaggaagc ggcggttaag taatttcgtc
    19921 agtacatcca taccgacttc gtggcgcgat acttcttcaa acaattcacg cagcaaggta
    19981 ataatttgcg atacagtatt tcttatctgt aataaaaatt tcacccgcag acttctgtta
    20041 ttcaaattcc tggtgttacg catggtttga ttgaatatac cgtcgaaatc ctgaatcaga
    20101 cgggagatat gcctacttcg gcaatgccac taaaataatg tcgaccttta tggttaaacc
    20161 acaggccaaa atcagcctgg cttaaaggca aactactgcc taaatcagaa tccagcagga
    20221 ttttatagat aatatctatt tcccatgaaa gtattgaggc tatttgccgt tctttttctt
    20281 cttcggcgtt ttctagtaac gagaagatac gatagttttc atcttccttt gaggcactac
    20341 tgtcactaaa ggtaaacgcg cgggtcatca cttccatagc gatatcaata ctgttaatcg
    20401 agaaatggta gacctgaagt ttttctgcgg cagaataatc cgaagagaag attaccggat
    20461 agaggatttt tttcagcacc cgaaacccca tctcgacaat ttctaccgga attcctatgc
    20521 gggcatgcac ttccgcgacg gtatgctgga tttgtattag cctttcgaca tcgtcaacct
    20581 gggcagaaag cacgttaata atccagcgtt ccatcgcact tttcaactgc cgctcaactt
    20641 gttcattact caagaattct tcggcatgcg ggtcgatgcg gacaattcga taaaactcga
    20701 tactcagata atgagcatgc gcaacggcaa tttccgcggc tttagcacga atgagtggat
    20761 ctgcccgttc gacaagtccg gtccactcat ctttcattct tttaaaatac atctccataa
    20821 ttcacaccct tataaggctg ggaaatcaga cggaatcaaa acgcaacgtg cgagatcgac
    20881 taactgcacc atattctcct gaaatatgaa gatatactga aaagaaataa gcgacttagg
    20941 acagtttcaa tctacgctac tgttcttcag aagagtatag cccatcgtaa ttatttttcg
    21001 gtgacagcga atatcgtatg gtttttcata ttcatacatt tttattaggg atttatagct
    21061 gtttaactaa gtgtggttaa ttgcgtggtt aatttgactt atgtaagcat gattactagt
    21121 gggatatttc acaaggtgta acaagccggt gggtaaagca ccggcttgtt acaaagtaag
    21181 catgggagtt taactgcccc aacgactttg cagatagctg accgcttgtt gagtctgcgg
    21241 tttattcaga tagtcctcac ggaacaagat ggtgccgcta atttctggta ccgcatcgtt
    21301 aagatcgagc tgctttttca gttccggtac gccgccgtta atcatccagt ctggctctat
    21361 ctttgaaggt tcacccactt tatagaaggc gataccgata tacaggcggg tcctggtcgg
    21421 tttaacgaca tccgcccacc attttgccaa cacgtcataa cgcgcggcac tccgtgagaa
    21481 cggccagtaa atttggggag caatgtaatc cagcaatcct tgttccaccc atcgacgggt
    21541 gtcagcgtag gattcgtcat aggctgccgc gcctcgggta tcggaaccga gcggatcgtg
    21601 tgatcggtta cgccacacgc ctgccgggct aacgccaaat tcgactcccg gcttaatgct
    21661 tttaatggtg tgcgatactt ttgtaattaa ctgctgagta ttgttgcgcc gccagtctgc
    21721 ttttgacgca aatgcgcctc cgtatttacg gtacgtttcg ttatcattta gccgtgaacc
    21781 cggtgactcc gtatagaaat agtcgtcaaa ctgcacgcca tctaccggat agcgggaaac
    21841 cacttcggcg actattgatg tgatccagtc ctgaacctca gggatgcccg ggtcgaggac
    21901 aaagcgatcg ccagacgttc tgatccagtc acggtgttgc acatagacgc tcgccggttg
    21961 ttgagacaga gtgctattca gttccctgat agtaccgggc ttcgtattaa ccgatacgcg
    22021 ataggggtta aaccaggcgt gtactttcat cccacgcttg tgggcttcgt cgagcataaa
    22081 ttgcagcgga tcgtaacccg gattttcacc aatcttaccg gtcataagat cggaccacgg
    22141 caaaattttt gatggccaca gggcggtacc gtccggcttg acctggaaaa agaccgtgtt
    22201 tataccgaga cgttgcagat gatccagttt gtcgatcatc gcctgttgtt gtacacgggc
    22261 ccggctggtg gggttactaa tgttaaccga ggaaaccggt ggccagtcga ggcgagacac
    22321 cgtggccagc cagatgccac gcatcggttg tgacgattgt tgcgtcgtgg ctggtggctt
    22381 tgaacctgct ggtggtgtca ccatggactc tggaggcgtg cttttacaac tacacagtaa
    22441 aagtgccagt gcaaccagta tcgctggtct tctaatcgtt aatttcttgt ttcgggagca
    22501 gatatccata tgtgctggtt tccggtaaac agatgtgcgc tcattctcgt acttatcccg
    22561 gttaagtcaa tacgacagca agcacgaaaa agggagcgat gaattatcgc tcccttgtct
    22621 tataaccatt cagacatggt tagtgtttct tgtcattcat cacaatatag tgtggtgaac
    22681 gtgcacgcgg gtgcaggaag aagtgacctt ttggtgcgtt ctgactgttg attggctcca
    22741 gagtgacgcc ggtattcgct ttgcctttac gatcatgaac agcatagaga ataaagggca
    22801 gggcaagtac caccaggaaa ctaacgacca gtaattcaac atacatatcg gtagagtcac
    22861 cctggatgtt atccggcggc aggaaggaaa caataaacgc cataattgaa gtcagcagac
    22921 cgacaattgc cacgaccagt tttacccctt taccaccagg gatattaaat gtgcgtttta
    22981 agtcaggatg tttaagaact aacacaatgt agccaataaa cagcatgaaa taagcacaca
    23041 gataaatcac caccgtcagc gccagtgcga tcaggaagga catgttgtta ccgccaccgg
    23101 tattggtgag gatgatcaac gcgatagaag taatcaccag ctgcgaaatg accagcgtta
    23161 ccggtacgcc atttttgttc attttagcga atgccgctgg cagcaggttt ttctgcgctg
    23221 tgacatacat cccgcgagaa ggaccaacaa tccaggaggc gatttccgcc agaacaccca
    23281 gcaacagcag tgcggagatc acgcgaaccg tccactcaat ttccggtgcc acatgggaca
    23341 tcagaacggt aaaggtttgc attacccctg cggagaggtt gatttcatta cccggaatga
    23401 ccatcgcaat agataaaccg ccaacagagc ttaagcagat tgccgccacc atcagcagta
    23461 acatagccag tggatagtcg cgcccggggt tgctcatttc attgacgtga gttgcggaag
    23521 cttctacgcc catataactc aaaatgaagg caacaaatac aaccagtgtg cccactttag
    23581 agaagtcagg gaagaaggtc ttcgaatcca tttcgatagc aacgggggca ccggagtgca
    23641 gataaatagc cgctaatgcg atcaaaataa atgcaggtaa caggataccg gcgaagaagc
    23701 caactttagc aattcgcgcc gtgtatttcg tgccaccaaa ctgcgttaat gccagcgccc
    23761 aaagaatgat gagtgctgca atagttttgg taatggggtc ttcattcagc gctggccatt
    23821 tcaggatgta ggagagtgcc cctaacacga aatagagcat cggaataaaa ccaatggcga
    23881 tttgcagata gccaaatgag atcgctgcaa atccccatct cggccccaga gtatttgata
    23941 cccaggcgaa gacaccacct tcttcccagc cgtcgacggt ggccatttcc gcagcacaaa
    24001 gtcccacggg aataaaccat aaaatcccgc ctaatagcag gaagaagact aatgaaaagc
    24061 ccgatgttgc gaaggtaggg tattcataaa cagccattac catcgatgcc gttatggcaa
    24121 agaatccgag taatgtgagc tgcttagctt tacctgtctg tactgatgta gccatattat
    24181 ccccctaaaa cggtattcct gtcggaaccg cacctgtttt gttctgaagc gtattcagaa
    24241 caatattttc cgttgctaat gccagtgaac agactttgga aattgtcccg aaacgggttc
    24301 gtttcgggac accgttaccg ttaaacgtta tcaggta
//
LOCUS       DADKRT010000050        23492 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.050, whole genome shotgun sequence.
ACCESSION   DADKRT010000050 DADKRT010000000
VERSION     DADKRT010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 23492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23492
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.050"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(297..611)
                     /gene="pspE"
                     /locus_tag="JQ356_001684"
     CDS             complement(297..611)
                     /gene="pspE"
                     /locus_tag="JQ356_001684"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HAY4621812.1"
                     /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP
                     LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV
                     KG"
     gene            complement(686..907)
                     /gene="pspD"
                     /locus_tag="JQ356_001685"
     CDS             complement(686..907)
                     /gene="pspD"
                     /locus_tag="JQ356_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HAY4621813.1"
                     /translation="MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
                     RRPLKMLLAVALEPLLSRAANKLAQRYKR"
     gene            complement(916..1275)
                     /gene="pspC"
                     /locus_tag="JQ356_001686"
     CDS             complement(916..1275)
                     /gene="pspC"
                     /locus_tag="JQ356_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HAY4621814.1"
                     /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
                     IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            complement(1275..1499)
                     /gene="pspB"
                     /locus_tag="JQ356_001687"
     CDS             complement(1275..1499)
                     /gene="pspB"
                     /locus_tag="JQ356_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HAY4621815.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA
                     QLADEAKRMRERIQALESILDAEHPNWRDR"
     gene            complement(1553..2221)
                     /gene="pspA"
                     /locus_tag="JQ356_001688"
     CDS             complement(1553..2221)
                     /gene="pspA"
                     /locus_tag="JQ356_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HAY4621816.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
                     SLEHEVTLVDDTLARMKKESGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
                     QDNQ"
     gene            2388..3365
                     /gene="pspF"
                     /locus_tag="JQ356_001689"
     CDS             2388..3365
                     /gene="pspF"
                     /locus_tag="JQ356_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HAY4621817.1"
                     /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL
                     IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPATVNEGT
                     FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLL
                     NYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP
                     LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
     gene            complement(3485..4750)
                     /gene="puuE"
                     /locus_tag="JQ356_001690"
     CDS             complement(3485..4750)
                     /gene="puuE"
                     /locus_tag="JQ356_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate transaminase"
                     /protein_id="HAY4621818.1"
                     /translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID
                     FAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA
                     KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP
                     FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPK
                     ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLS
                     GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL
                     IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG
                     NVIRFLYPLTIPDAQFDAAMKILQDALSD"
     gene            complement(4788..6020)
                     /locus_tag="JQ356_001691"
     CDS             complement(4788..6020)
                     /locus_tag="JQ356_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004984233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY4621819.1"
                     /translation="MPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASR
                     IGFGASGRNGGQLVNSYNRDIDVIEKSYGMDTAPMLGSMMFEGGEIIRERIKRYQIDC
                     DYRPGSLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDH
                     SGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAG
                     NAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTA
                     DNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQF
                     GRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRV
                     PFTAMGAAYYSLRDRLGV"
     gene            complement(6059..7546)
                     /gene="puuC"
                     /locus_tag="JQ356_001692"
     CDS             complement(6059..7546)
                     /gene="puuC"
                     /locus_tag="JQ356_001692"
                     /EC_number="1.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase PuuC"
                     /protein_id="HAY4621820.1"
                     /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
                     QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
                     LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
                     IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLN
                     VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV
                     FSDCSDLQKAASSTAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
                     LDPATTMGTLIDCAHADSVHSFIREGEGKGQLLLDGRNAGLAAAIGPTIFVDVDPNAS
                     LSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWMRDLSRAHRMSRRLKAGSVF
                     VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
     gene            complement(7821..8378)
                     /gene="puuR"
                     /locus_tag="JQ356_001693"
     CDS             complement(7821..8378)
                     /gene="puuR"
                     /locus_tag="JQ356_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001464354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator PuuR"
                     /protein_id="HAY4621821.1"
                     /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
                     VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
                     PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT
                     GIPHSFSNTSAGICRIISAHTPTTF"
     gene            complement(8405..9168)
                     /gene="puuD"
                     /locus_tag="JQ356_001694"
                     /pseudo
     CDS             complement(8405..9168)
                     /gene="puuD"
                     /locus_tag="JQ356_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415814.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
     gene            9380..10798
                     /locus_tag="JQ356_001695"
     CDS             9380..10798
                     /locus_tag="JQ356_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HAY4621822.1"
                     /translation="METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLL
                     TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP
                     VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
                     EFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP
                     ADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYEEH
                     AGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR
                     FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILH
                     GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
                     DELLQFERLITETEIEWMLKNA"
     gene            10947..11112
                     /locus_tag="JQ356_001696"
                     /pseudo
     CDS             10947..11112
                     /locus_tag="JQ356_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518772.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11102..12487
                     /gene="puuP"
                     /locus_tag="JQ356_001697"
     CDS             11102..12487
                     /gene="puuP"
                     /locus_tag="JQ356_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PuuP"
                     /protein_id="HAY4621823.1"
                     /translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF
                     GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMV
                     GWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSINLVANFN
                     TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF
                     LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA
                     LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH
                     PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMN
                     KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL
                     YDGDRTPVSET"
     gene            12621..12866
                     /locus_tag="JQ356_001698"
     CDS             12621..12866
                     /locus_tag="JQ356_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmjA family protein"
                     /protein_id="HAY4621824.1"
                     /translation="MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLM
                     NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
     gene            13179..14822
                     /gene="sapA"
                     /locus_tag="JQ356_001699"
     CDS             13179..14822
                     /gene="sapA"
                     /locus_tag="JQ356_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HAY4621825.1"
                     /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV
                     NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
                     DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLKFADNVKSV
                     RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
                     QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
                     QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
                     TAETAASILPRASWAYDNEAKITEYNPAKSREQLKALGLENLTLKLWVPTRSQAWNPS
                     PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
                     LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
                     SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
     gene            14819..15784
                     /gene="sapB"
                     /locus_tag="JQ356_001700"
     CDS             14819..15784
                     /gene="sapB"
                     /locus_tag="JQ356_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HAY4621826.1"
                     /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT
                     RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA
                     LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
                     RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
     gene            15771..16661
                     /gene="sapC"
                     /locus_tag="JQ356_001701"
     CDS             15771..16661
                     /gene="sapC"
                     /locus_tag="JQ356_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HAY4621827.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
                     FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
                     AMLAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
                     VLLVNLLGDGVRRAIIAGVE"
     gene            16661..17653
                     /gene="sapD"
                     /locus_tag="JQ356_001702"
     CDS             16661..17653
                     /gene="sapD"
                     /locus_tag="JQ356_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HAY4621828.1"
                     /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
                     GKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
     gene            17655..18461
                     /gene="sapF"
                     /locus_tag="JQ356_001703"
     CDS             17655..18461
                     /gene="sapF"
                     /locus_tag="JQ356_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HAY4621829.1"
                     /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
     gene            18529..18882
                     /locus_tag="JQ356_001704"
     CDS             18529..18882
                     /locus_tag="JQ356_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HAY4621830.1"
                     /translation="MMDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVG
                     SYILDFACCSARVVVELDGGQHDLAVAYDTRRTSWLESQGWTVLRFWNNEIDCNEEAV
                     LEIILQELNRRSPSP"
     gene            19250..20038
                     /gene="fabI"
                     /locus_tag="JQ356_001705"
     CDS             19250..20038
                     /gene="fabI"
                     /locus_tag="JQ356_001705"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HAY4621831.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
     gene            20183..21310
                     /locus_tag="JQ356_001706"
     CDS             20183..21310
                     /locus_tag="JQ356_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309887.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain-containing protein"
                     /protein_id="HAY4621832.1"
                     /translation="MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVI
                     LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
                     NYYSARLTPLPGPDSSRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTARDC
                     VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEV
                     EKLPEEYTKSSTAELCQLAETLSLHPISLSLLERLLNSTRVNTQPDNKLAALLCARIN
                     GSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVEHATVQAIQWLTRAPDRFS
                     TAQFSPLLEHEQSSTQIINLLVWSGLCGWINRLKIALGETY"
     gene            21378..23312
                     /gene="rnb"
                     /locus_tag="JQ356_001707"
     CDS             21378..23312
                     /gene="rnb"
                     /locus_tag="JQ356_001707"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HAY4621833.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD
                     HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
                     WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP
                     DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPVLACRMTLSADGAIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIA
                     EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
                     MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
                     KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAA
                     EIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPVA"
     gene            complement(23390..23492)
                     /locus_tag="JQ356_001708"
                     /pseudo
     CDS             complement(23390..23492)
                     /locus_tag="JQ356_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791239.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         5310 a         6211 c         6115 g         5856 t
ORIGIN      
        1 gacgcgttac aagtttctgt aaatgagttg cggtaaatgt tccaccgtag atttcgtcca
       61 ggtaatcagt aattttctgt ttcatgttgc ctttcagtgg tagcgatccc atgaaacgag
      121 agactactcc gcagaaaata aactgtcaat tgagcacaag ggttttagtc acgcaggaaa
      181 tcatttttta ccagggaaaa agcgtatttg tgagctgacg caaataatct atggggatgt
      241 aaataaggtg tgacagaaaa aaaacggcgc ataagcgccg ctcatggtga attcttttaa
      301 cctttgacct tcggcattgc gatgtctttc aagccaccgg cgttctcaac gtgggtatat
      361 cccatctcgc taaggatctc ttttgcttgc cctgactggc gtccggcatt gcaatacact
      421 ttcacggtgt cgtttttatc cggaacggcg gtggcaatgc gctctttcac ttccttcagg
      481 ggaatattga tggccccctg aacgtgctct tgctgatact gctctggaac acgaacatcg
      541 atccagtgtt cagcggcgaa aacgggcagt gaaaacacca gtgccagagc aagtaagcct
      601 tttttaaaca tgtaagcgtc cttctatgga tgaaaattgc catccattat acgcctgaga
      661 tttaacaatt tttgcgaaac tcccctcacc ttttataacg ctgtgccagt ttattagcag
      721 cccgacttaa cagcggttcc agcgccacag ccagcaacat tttcagcggt cggcgagcaa
      781 ctgattttat cgcccagccc gctacacccg ccgggccata gcgcagtgcg gtaagaagta
      841 ccagcttgcc tgctaatttg aaaccaggct ttaccttttg cccggcctgt tgccagcgag
      901 tattcataac tttcctcaca gttgacggaa acggctacgt aacgtgaaag tatcggaagt
      961 gacataacgt tccatctcgc gtaaacgcgt ttcacttgcc gccagttcac ggtcgacttc
     1021 atccagcaat tcgctgctgg agggtagctg ctcaccaaag gccatgttgt ccggcattgg
     1081 atcaagcgca aatgacaaaa tgatgtaagc aaccagggta aacagcgcca gaccgaagaa
     1141 aatcgacagc accaccagga tacgcaccag ttttaccggt acatcaaaat agttggcaat
     1201 cccggcgcag acgccgcgga ccatgccctg ctgtggaata cgccataatt ttttattgag
     1261 attaatgccc gccattagcg atccctccag ttcggatgtt ctgcatcaag aatagattcc
     1321 agcgcctgaa tacgttcgcg catccgtttt gcttcatcag ccagttgcgc taatcgctgc
     1381 tgctcacttt gcgacaattc actgcgacca gaacgattgc tgtaatgcag ccataaccag
     1441 atcggtaaaa caaacagcac aaaaatggtt aacggaatag ccagaaatag cgcgctcata
     1501 agtactcctt agacgatgag cggcggcgcg ttcggacgcc gcctagatgt tattattgat
     1561 tgtcttgctt cattttggct tttaattgtg ccagttgttc gctgattgca tcatcggctt
     1621 tcagttcggc aaactgatcg tccagcgatt tttgtttacc gaagctgtgg ctttctgctt
     1681 ccgcttccat ctggtcaata cgacgttcga aagattcgaa acgagccatt gcttcatcca
     1741 gtttgccact gtccagctga cgacgcacat cgcgcgacga gtttgccgcc tgatggcgta
     1801 acatcaatgc ctgctggcga gcgcgtgttt cgctcaattt gttttccagc tcaccgctct
     1861 ctttcttcat gcgtgccagc gtatcgtcca ccagcgtcac ttcatgttcc agactcttaa
     1921 tcagatcggt cagtttctgt ttttcaatta acgccgcacg tgccaaatcc tctctctctt
     1981 tcagcagcgc cagttcggct ttttcctgcc attcaacttc acgcgccgac gcttgttcaa
     2041 tacggcgagt cagctgtttc ttttctgcca acgcacgcgc cgaagtagaa cgtacttcaa
     2101 ccagtgtatc ttccatctcc tggatcatca gacgcaccag tttctgtgga tcttccgctt
     2161 tctctaacag agcgttgatg ttggcattca cgatgtcggc aaagcgagaa aaaataccca
     2221 taatgttgtc ctcttgattt ctgcgttcag gattgtcctg ctgaactgtt aatacaattt
     2281 gcgtgccaat tttttatctt tttgatttat aaagatctga ttgaagaatc atcagcaaca
     2341 tgccaggatg aattagcgaa ttacactaac aagtggcgaa tttcatcatg gcagaataca
     2401 aagataattt acttggtgag gcgaacagct ttctcgaagt gctggaacag gtttcgcatc
     2461 tcgcaccgct ggacaaaccg gtgctcatca tcggcgaacg cggcaccggt aaagagctga
     2521 ttgccagccg cctgcattat ctctcctccc gttggcaagg gccgtttatt tcccttaact
     2581 gcgcggcgtt aaatgaaaat ctgctggatt ccgaactgtt tggtcacgaa gcgggggcgt
     2641 ttaccggtgc gcaaaaacgt catccaggga gatttgaacg tgccgacggc ggtacgctat
     2701 ttcttgatga actcgctacg gcaccgatga tggtgcagga gaaattattg cgcgtgattg
     2761 agtacggtga actggagcgc gttggcggca gccagccatt gcaggtgaat gtgcggttgg
     2821 tatgcgcgac gaatgccgat ctcccggcga cggtcaatga aggcactttt cgcgctgacc
     2881 tgctcgaccg actggctttt gatgttgtac aactgccacc actgcgcgag cgcgaaagcg
     2941 acataatgtt gatggcagaa cactttgcca tccagatgtg tcgggaaatc aagctgcctc
     3001 tgttcccggg gtttacggag cgcgccagag aaacattgct gaattatcgt tggccgggaa
     3061 atattcgtga attgaaaaac gtggtggaac gttcagtgta tcgccacggc accagcgatt
     3121 atccgcttga tgacatcatt attgatccct ttaaacggcg tccgcctgaa gacgctatcg
     3181 ccgtttcaga aaccacctcg cttccaacac tgccgctgga tttacgtgag tttcagatgc
     3241 agcaggaaaa agagttgctg caactcagtt tgcaacaagg gaaatataac cagaagcgcg
     3301 cggctgaatt actggggtta acttatcatc agttccgcgc gttgttgaaa aagcaccaga
     3361 tttagcgaag ttgagcaata caacttgccg gatgcggcgt gaatgcttta ttcggcatac
     3421 ataatcaata agtcgtttgc aggcctgata agcgcagcgc atcagacatt attgcgttgg
     3481 gctattaatc gctcagcgca tcctgcaaaa ttttcattgc cgcatcgaat tgcgcatccg
     3541 gaatggtcag cggatacagg aagcgaatca cgttgccgta tgcgccacag gtcagcagga
     3601 gcagcccctg cgccagcgcg cgttgctgga ttttctgtgc aatcgccgct gacggctcgc
     3661 ccgtttgcgg atcgttaaac tctgccgcaa tcatcgaccc caggccgcgt accgcagcaa
     3721 tggccggaac gctttctttg gcatcaatca acgtgttttt gagacgctgg cccagttgat
     3781 tcgcgcgttc gcagagtgat tctttgtcga taatattgag caccgcgtgc gcggcagcca
     3841 ccgccagcgg gttcccggcg taggtgccac ccaacccgcc cggcgcgggc gcgtccataa
     3901 tattcgcgtt accgaccacg cccgaaagcg gcatcccgcc cgcgaggctt ttcgccatcg
     3961 tcattaagtc cggcttatcg gcgtaatgat ccatggcaaa cagtttaccg gtacgcgcaa
     4021 agccgctttg cacttcatcg gcaatcatca caataccgtg ctcgtcgcac aggcggcgaa
     4081 tggcggcaac cagctctttt ggcgcaacgt tgaaaccgcc ctcgccctgc accggttcga
     4141 aaataatggc cgccacctgc ttcgcttcaa tgtccgattt aaacaagcgt tcgatggcgt
     4201 cgagggagtc ctgtgttgaa atgccgtgta aatctgacgg ataaggtacg tgatacaccg
     4261 aaccagggaa cgggccgaag ccgattttgt acggcgcaac ttttccggtc agcgccatgg
     4321 tcatatatgt acgaccgtgg aagccgccgc taaacgcaat cacgccaggt cgtccggtat
     4381 gggcgcgagc aattttcacc gcgttttcca ccgcttccgc gccggtagtg aagaatgcgg
     4441 ttttagcctg cccgctcact ggggcaaggg cgttaatttt ctccgccagc gtgacgtagc
     4501 tttcgtacgg cacaatctga tacgccgtgt gggtaaactg ttgcaattgc tgctccaccg
     4561 ccgcgaccag atcagggtgg cgatgcccgg tattcagcac cgcaatgcct gcggcgaaat
     4621 cgatgtattc gttgccctct acgtccttca gcgtagcgtt ttctgccgac tgggcgaaga
     4681 agttacacat cacgccaacc ccgcgtgggg tagcagaaag acgacgctga tggaattcat
     4741 tgttgctcat gtttcacacc ttttgactct tcactgttaa tcggaaatta aacgcccaga
     4801 cgatcgcgca ggctgtaata agccgcgccc atcgcggtaa atggcacgcg cagcgtgcgc
     4861 ccgccgggga acgggtaatg cggcagattg gcgaaggcat cgaaacgctc ggcgtcaccg
     4921 cgcagcagtt cagcaatcaa acgcccggcg aggtgggtac aggtgacgcc gtggccgctg
     4981 tagccctgca tgtaatagat gttggtatcg aggcgaccga actgcggcat ccgtgaaagg
     5041 gtcagcagga agttgcccgt ccagcgatag tcgattttga cgcccttcag ctgcgggaag
     5101 gttttcagca gtttcggcac aacaagacgc tcaacgtcat ccgggtcgcg cgcgccgtag
     5161 accacgccgc cgccgtacag caaacggttg tcggcggtaa gacggtagta atcaagcaga
     5221 taattacagt cttccacaca gtagtttttc gggatcagcg aacgggctaa atcttccgac
     5281 agccgttcgg tggtgatcac ctgcgtgccg cacggcatgc tgcgtttcgc cagttccggc
     5341 tctactttat cgcccagata cgcattcccg gcgacaatca catacttcgc cgtcacctga
     5401 cctttggcag tgcgcacaac ggctggcgtg gtgtgctgga tctgcgtcac ggcagaaagt
     5461 tcatacacgc gcccgccgtt gaggcggatg gcgtccgctt cgccaatggc gaggtttagc
     5521 gggtgaatat gcccaccgct gtgatccagc agcgcaccgg tatagcgatc gctggctact
     5581 tcacggcgaa tggcgttggc gtccagcaat tccagctgtt tattgccgta gcgttcccag
     5641 ttctctttct gctcttcaag tgtggcgagc tgtttatcat tcatcgccac aaacaggctg
     5701 ccggggcggt agtcgcagtc aatctgataa cgtttgatac gttcgcggat gatctcacca
     5761 ccttcgaaca tcatgctgcc gagcataggg gctgtgtcca tgccgtagct tttttcgatc
     5821 acgtcgatgt cgcggttgta ggagttcaca agctgcccgc cattgcgccc gcttgcgcca
     5881 aagccgatgc gtgaggcttc gagaaccact acgtcaaagc ccgcttccgc cagatgcagc
     5941 gcggaggaga gcccggtata gccgccgcca accacgcaaa cgtcgcaggt gattgactca
     6001 ttcagggtgt cgaatggcac gtatttatgc gtaataactg ctggtatgtt cggtcatttc
     6061 aggcctccag gcttatccag atggttttca gttcggtgaa tttttcaagg gcatgcaggg
     6121 atttgtcgcg accgttgccg ctctgcttat agccgccaaa cggcacggtc atatcgccgt
     6181 cgttgtagtt attgacgaag acggaaccgg ctttcaggcg gcggctcata cggtgcgcgc
     6241 gggagaggtc gcgcatccat accgccgcgc caaggccgta ctggctgtcg ttggcaagct
     6301 gtagcgcctg ttcttctgat gtgaaacgcg tgaccaccag caccggaccg aaaatctctt
     6361 cgcggcttaa ggacgcattc gggtctacat ccacaaagat ggtcgggccg atggcggcag
     6421 ccagcccggc gttacggcca tccagcagca gttgcccttt gccttcgccc tcacgaataa
     6481 agctatggac cgagtcggcg tgggcgcagt cgattaaagt gcccatggtg gttgcggggt
     6541 caagcggatg gcccggctgc cagttttgcg cctgctgttt taacagggct aagaattcat
     6601 cggcgatgct ctcttccagc aacaggcgtg ttccggcgat gcacacctga ccctggttgt
     6661 agaagatgcc tgctgcggtg gagctcgccg ctttttgcag atccgaacaa tcggagaaaa
     6721 cgatgttggc gcttttgccg cccgcttcca gccagacgcg tttcatgttg ctgtcgcccg
     6781 catctttcag cagctgtttc ccggtacggg ttgaaccggt aaaggcaatg gcgtcgatat
     6841 cgttatgacg cgacagcgcc tgccccgctt catgaccaaa acccgtcacc acgttcaaca
     6901 caccatccgg caagcctgct tctttcgcca gccccgcgag acgaatcgca ctgagcggtg
     6961 atttttcaga cggttttaga atcacgctgt ttcccgccgc cagcgccggg ccgagtttcc
     7021 agcaagtcag caacagcggg aagttccacg gcacgatggc ggcaatcacg ccgaccggtt
     7081 cacgcacgat catcgccagc tcatggctac tggtggtcgc cacttcgcca tacactttgt
     7141 cgatcgcttc ggcgtaccag cgaatggcgc gcgccgcgcc gggaatatca tcacgcagac
     7201 tgtgacgaat cggtttgccg gtgtcgagag tttccagcag tgccagctct tcggcgtggg
     7261 cttccattaa atcggcgagt ttattcagta ccgctttacg tttagccgga gaagagagtg
     7321 accagtcgcc gcgttcaaat acgccgcgtg ctgcgctcac cgcacggtcg atatcgacgc
     7381 tcttgccgcg ggcaattttc gccagcggtg cctgggtgac tggatcaacg gtttcaaagg
     7441 tttcattttc cgccgcagca gtatattcac cgttaataaa taagcggttt tcaatggcga
     7501 gacttaacgc tttatcctgc cagtaagcca gatgatgaaa attcattatg actcctgttt
     7561 cacgtctatc agatatatgc agtttgtgaa cgtcagggcg cagagatccc cgggccgtat
     7621 gcccgtttat ttctggcgac attctttata tacacttcat ccttcaagcc gcctctgcct
     7681 tggctgcgtt cgctcccccg aatcacttac ctgagtaagc tcatcgggat tcgctcactt
     7741 gccgccttga tgcaacttga atgattttgt gtatagattg ccgggcgcat tgcgcttacc
     7801 cggcttacag aacaaaaaga ttaaaacgtg gtgggcgtat gggcgctgat aattcggcaa
     7861 atacctgccg acgtattact gaaactgtgc gggatgccgg tattaatggc ataactttga
     7921 cccgcgacga ggtggtaatc ctgaccatta atcgtcagaa caatttcacc ttccagtact
     7981 gtgcctattt cctcaccctg atgcttaatt ctttccccag tggttgtgcc cggctggtac
     8041 gtttcaaaga tcatcgccag cgtgcgattc gggttaccgt tatgaaccag cttcattgac
     8101 acaccctgac tgcccatctc aattaagtcg tcctgattaa tgacgacctg cggctcatca
     8161 ggtttttccg gctcggaaaa gaattccgag agtgacagac catacacctt cagcagcttt
     8221 tgcagcgtac tgatggcagg gctgacttta tcttgttcta tcgtactgat agcactgtga
     8281 gtcagcccgg agagttcggc ggcacgacgt tgtgaaagcc cctgctgctg gcggatttcc
     8341 gacaagcgtt ttcctggcgc cagtccctca tcactcatat ttgcatttcc ttaaactgta
     8401 gtggtcagag tcgctgtttt tcagcgatat ggtgctgaca agcggtgata aagccctcga
     8461 acaatatacg cgaaagagcg tactcgctac tgttccattc cgggtgccac tgtacgccca
     8521 gcgcaaaagg atgattgatg acgctaaccg cctcaactaa gccatccggc gagcgagctt
     8581 caacacgcaa ccgtgggcta acgaccttcg ccccttgtcc atgtagagag tttacccaaa
     8641 agttgctaca ttcaggtaac aacgcagaca gtaatccccc ctcttcaacc tgaacttcat
     8701 gcgacggtgc atattgctgt tccaccggca gttcggatct tcccgatgtt ccagcaattc
     8761 aggctgttcg cacagcttgc gatgcaacga accaccggtt gccaccacca gttcttgtaa
     8821 accccggcag atggcgaaaa tggggatgcg cctttcgagt gcggcattaa ttatcgccat
     8881 gctcagaaga tcacgcccgg gatcggcgtc aggctcatcg ccgttttcac catataggtg
     8941 cggctgcaca ttgctgggac taccaggaag ataaatgcca tcgagtttcg gcaaaagttg
     9001 ttcaagtaac gacggttccg ccagcgcatg tggtagcgca attggcaagc cgcctgcgtg
     9061 gatgatggca ttcaggtact tttcttgcag agtctgggtc gcatgaccct taagcctgtt
     9121 cctgcacatt acgacaccga taaccggatt gttcattata tttttcatgc tcaatctcac
     9181 aaagtggact aaattatcgc cattactgcg ctttaaatga cctttatgtt caatattttt
     9241 tcaatctagc agtgggtttt catttttgca aactaaattt aacatttagc aaacatttag
     9301 tttgcataca gattcgaatg gtggtcatta tattttacgc tttgataacg agcggaaaac
     9361 aaaccaaagg cgaagaatca tggaaaccaa tatcgttgaa gtagagaact ttgttcagca
     9421 gccagaagag aggcggggta gcgcctttac gcaggaagtg aaacgctacc tggagcgcta
     9481 cccgaatacg caatatgttg atgttttact tactgatttg aatggttgct tccgtggaaa
     9541 acgtatccct gtttcaagcc tgaagaagtt ggagaaaggg tgttatttcc cggcctcggt
     9601 gtttgcaatg gatattctgg gcaacgtagt agaagaagcg ggtctgggtc aggaaatggg
     9661 cgagccggat cgtacttgtg ttcctgttct cggttcctta accccttctg ccgccgatcc
     9721 agagtttatc ggtcagatgc tcctgaccat ggtcgatgaa gatggcgctc cctttgacgt
     9781 tgagccgcgg aacgttctta accgcctgtg gcagcagcta cgccagcgcg gattgttccc
     9841 ggttgtagcg gtagagctgg agttctattt actggatcgt cagcgcgacg ctgaagggta
     9901 tctgcaaccg ccctgcgcgc ccggcaccga taaccgcaat acacaaagcc aggtttactc
     9961 cgttgataac ctcaaccact tcgccgacgt gctcaatgat attgatgaac tggcgcagtt
    10021 acagttaatt cccgccgacg gtgcggtcgc cgaagcctcg ccgggtcagt ttgaaatcaa
    10081 cctttaccat accgataacg tgctggaagc ctgcgatgat gcgctggcgc taaaactcct
    10141 ggtgcgtctg atggcagaaa agcataagat gcactccact tttatggcga agccgtatga
    10201 agagcacgcg ggcagcggga tgcatatcca tatcagtatg caaaataatc gtggcgagaa
    10261 tgtgctttct gacacagaag gcgaagattc gccgctgctg aaaaagatgc tcgccgggat
    10321 gattgacctg atgccgtcgt cgatggcgtt gctggcacca aacgtgaact cgtatcgccg
    10381 cttccagccg ggaatgtatg tgccgacgca ggcgtcgtgg ggccataaca accgcaccgt
    10441 cgccctgcgt attccgtgcg gcgaccgtca taatcaccgc gtggaatatc gcgtggcggg
    10501 tgccgatgcc aacccatatc tggtgatggc agcgattttt gccggtattt tgcatggcct
    10561 tgataacgag ctgccgttgc aggaagaagt cgaaggcaac gggctggaac aggaaggctt
    10621 acccttcccg attcgccaga gcgatgccct gggtgagttt atcgagaatg atcacctgcg
    10681 ccgctattta ggcgaacggt tttgccatgt gtatcacgcc tgtaaaaatg atgagctgtt
    10741 gcagtttgag cgcctcatca cagaaacaga aattgagtgg atgttgaaaa acgcatagta
    10801 ccccttgcgg ggttgtttca tcgacctgag cggagccagg cctgacattt gctggtaatc
    10861 cagacatttc ccggatgtcg cgttatggag cgcaggcggc aacgggcttc cgttaacgat
    10921 taagactgtg acgaggaaat gagatgatgc cgatgattaa atccccgcat ggcgagggag
    10981 gctgcgtatg cgcccctcct gctactgact ggactccgtc ccctttgctt cccttgctaa
    11041 acaggtttga tttcaggtcg acacgaccgc aaaccttatt acgcaggggg aggcagcaat
    11101 tatggctatt aattcaccac tgaatattgc tgcgcaaccc ggcaaaaccc gtctgcgaaa
    11161 atcactgaaa ttgtggcagg tggtgatgat gggtctggcc tatctcacgc cgatgaccgt
    11221 atttgatact tttggtattg tctccggcat tagcgacggt cacgttccgg cgtcctattt
    11281 gctggcgctg gcgggcgtgc tgtttaccgc tatcagctac ggcaaactgg ttcgccagtt
    11341 tccggaggcc ggttcggcct atacctacgc gcaaaagtcg attaacccgc acgtcggatt
    11401 tatggtcggc tggtcatcgc tgctggatta tctctttttg ccgatgatca acgtcttgtt
    11461 ggcgaaaatc tatctctccg ccctcttccc ggaagtgccg ccgtgggtgt gggtagtaac
    11521 cttcgtcgcc attttaaccg ccgcgaatct gaagagcatc aacctggtcg ctaacttcaa
    11581 taccctgttt gtactggtgc aaatctccat catggtggtg tttatcttcc tggtagttca
    11641 gggactgcat aaaggagaag gcgttggcac cgtctggtca cttcagccgt ttatcagcga
    11701 gaacgcgcac ctgatcccga ttattaccgg ggcgacgatt gtctgtttct ccttcctcgg
    11761 tttcgatgcg gtgaccacgc tttcggaaga gacgccggac gccgcacgcg tgatcccgaa
    11821 agccatcttc ctgacggcgg tctacggtgg cgttatcttt atcgcggcgt cgttctttat
    11881 gcagctgttc tttcccgata tcagccgctt taaagatccg gatgccgcac tgcctgaaat
    11941 tgcgctgtac gtcggcggca agctcttcca gtcgattttc ctctgcacca cgtttgtgaa
    12001 cacgttagcc tctggcctgg cttcacatgc cagcgtgtcg cgtctgctgt atgtgatggg
    12061 gcgtgacaat gtgtttccgg agcgcgtgtt tggctatgtg cacccaaaat ggcggactcc
    12121 ggcactcaac gtcattatgg tcgggattgt cgcgttgtcg gcgctgttct tcgatttagt
    12181 taccgccaca gcgttaatta acttcggtgc tctggtggcg tttaccttcg tgaatctgtc
    12241 ggtgtttaat catttctggc ggcgtaaagg aatgaataaa agctggaagg atcacttcca
    12301 ctatttgctg atgccgctgg ttggcgcgct gacggtgggt gtgctgtggg ttaacctcga
    12361 gtcaacgtca ctgacactcg gtctggtatg ggcttcgtta ggcggcgcat atttatggta
    12421 tctgatccgc cgctatcgca aagtgccgtt gtatgatggt gacagaacgc cggtgagtga
    12481 aacgtaatag tcggatgcgc ggcgcattat cctgccggag ggtaatgcac cgcgccatta
    12541 actataaaaa gatgtatgac ccggatcacg agtgctatca tccgccctta tgcttagcgc
    12601 attaacccca ggggcaaata atgaaccacg atatcccgct aaaatatttt gatattgccg
    12661 atgagtacgc gaccgaatgc gcagagcctg tcgcagacgc tgaacgcaca ccgctggccc
    12721 actacttcca gttactgctc acccgtttga tgaacaatga agagatcagc gaagaagccc
    12781 aacatgaaat ggctgctgaa gcggggatta atcccgtacg cattgatgag atcgcagagt
    12841 ttttgaatca atggggtaat gagtaattat ttaattgcag acgatcggtc agtatcgttg
    12901 tccggataaa gcgttcacgc cgcatccggc taacaatgac acgcactgca gcgtgcttta
    12961 atgggtttct cacgatcgta ccgctctgct cctcgctgag ttgttctgtg agttatagtt
    13021 atagaggaag cacgggtacg aatgttgaac agatggcgac gccacctgtt caacgaccaa
    13081 ccacacggcc ctcattacga cccctgaaca caaacggtaa tggcaaatgt cattaaatat
    13141 tagtaagata gcctctttac ataaaatccc ttaatattat gcgccaggta ttatcgtctc
    13201 ttttggtgat tgctggactt gtgagtggtc aggcaatcgc cgcgcctgaa tcccccccgc
    13261 atgctgatat ccgcgacagc ggttttgtct attgcgtcag cgggcaagtc aacaccttta
    13321 acccatccaa agcgagcagt gggttaattg tcgataccct tgccgcccag ttttatgatc
    13381 gactgctgga tgtcgatccc tatacctatc gcctgatgcc ggaacttgcc gaaagctggg
    13441 aagtactcga caacggcgcg acctatcgct tccacctgcg tcgcgatgtt ccgtttcaaa
    13501 aaaccgactg gtttactccc actcgtaaaa tgaatgccga cgatgtggtg tttaccttcc
    13561 agcgaatttt tgaccgcaac aacccgtggc ataacgtcaa cggcagcaac ttcccctact
    13621 tcgacagcct gaaatttgcc gataacgtga aaagcgtccg caaactggat aatcataccg
    13681 ttgagttccg actcgcccag ccggatgctt cttttttgtg gcacctcgca acccattatg
    13741 cttcggtcat gtcggcagaa tatgcccgga agttagagaa agaagatcgc caggagcaac
    13801 tcgaccgtca accggtcggc accggtccgt atcagttgtc ggaataccgc gccgggcaat
    13861 ttattcgcct acaacgtcat gatgacttct ggcgcggtaa accgttaatg ccgcaggtag
    13921 tggtggattt aggctccggc ggcaccggac gtctgtcgaa actcctgacc ggggaatgcg
    13981 acgttctggc ctggcctgct gccagccagc tatccatttt gcgtgacgac ccgcgcttgc
    14041 gtttaacgct gcgtcctggg atgaacgtcg cctatctggc atttaacacc gccaaaccgc
    14101 cgctaaataa tcccgctgtc cgccatgcac tggcactggc gattaataac cagcgcctga
    14161 tgcaatccat ctattatggt acggctgaaa cggcggcctc tattttaccg cgcgcctcgt
    14221 gggcctatga caacgaggct aaaattactg aatacaatcc ggcgaaatcg cgcgaacagt
    14281 tgaaggcgtt ggggctggaa aacttaacgc tgaaactgtg ggtgcccaca cgttcgcagg
    14341 cgtggaaccc cagtccactg aaaactgccg aactgattca ggcggatatg gcgcaggttg
    14401 gcgtaaaagt ggtgattgtg ccggtagaag gtcgctttca ggaggcacgg ttgatggata
    14461 tgagccatga tctgacgtta tccggttggg cgacggacag taacgacccg gacagtttct
    14521 tccgtccttt actgagctgc gcggcaattc attcacagac caacctcgcc cactggtgcg
    14581 atccgaaatt cgacagcgtg ttgcgtaagg cgctctcctc gcagcagctg gcggcgcgta
    14641 ttgaagccta tgacgaagcg cagagtattc tggcgcagga attgcccatt ttgccgctgg
    14701 cgtcgtcatt gcgtttgcag gcctatcggt acgatatcaa aggtctggta cttagcccgt
    14761 ttggtaacgc ctcctttgct ggggtgtatc gcgagaaaca ggatgaggtg aaaaaaccat
    14821 gattatcttc accttacgcc gcattttgtt attgattgtc accttgttcc tgctgacctt
    14881 cgttggcttc agcttgagct atttcacccc tcatgcgccg ttacaaggcg cgtcactgtg
    14941 gaatgcctgg gtgttctggt ttaacggcct gatccactgg gattttggtg tttccagcat
    15001 taacggtcaa ccgattgccg aacagttaaa agaggtcttc ccggcgacga tggaactgtg
    15061 catcctcgcc ttcggttttg cgctgattgt tggcatcccc gtggggatga ttgccgggat
    15121 tacgcgccat aagtggcagg ataacttgat caacgccatc gccttactgg gcttttcaat
    15181 cccggtgttc tggctggcgc ttctgttgac gctgttttgt tcactcacgc taggttggtt
    15241 gcccgtttca gggcgtttcg atctgctcta cgaagtgaaa ccgattaccg gttttgcgtt
    15301 gattgatgcc tggctttcgg actcaccatg gcgggatgaa atgatcatga gcgcaatccg
    15361 ccatatgata ttgcccgtga tcaccctgtc ggttgcgcca acaactgaag tgatccgcct
    15421 gatgcgtatc agcactatcg aagtgtatga ccagaactat gtaaaagcgg cggcgacccg
    15481 cggtttgtcg cgctttacta ttttgcgtcg ccacgttctg cataacgcgt taccgccggt
    15541 tattcctcgc ctgggcttac agttttccac catgctgacg ctggcgatga tcaccgaaat
    15601 ggtttttagc tggccgggtt tagggcgctg gttaattaac gccatccgcc agcaggatta
    15661 cgcagccatt tccgccggag tgatggtgtg tggctcactg gtcattattg ttaacgtgat
    15721 ttctgatatt ttgggtgcca tggctaaccc tctgaaacat aaggaatggt atgccttacg
    15781 atagcgtata cagcgaaaag cgcccgccgg gcacgctgcg taccgcctgg cgcaaatttt
    15841 atagtgacgc ctctgcgatg gtcggcctgt acggctgcgc ggggctggct gtactgtgta
    15901 tttttggcgg ctggtttgcg ccttacggca tcgaccagca atttctcggt tatcaattat
    15961 tgccgccatc atggtcgcgc tatggcgaag tttctttctt cctggggact gacgacctcg
    16021 gacgcgatgt tttaagccgt ttactgagcg gagctgcgcc aaccgtgggt ggcgcatttg
    16081 tggtgacgct tgccgcgacg atctgtggcc tagtactggg caccttcgcc ggggcgacac
    16141 acggcctccg ctcagcggtg cttaaccata ttctggatac cttactggca atcccttcgc
    16201 tgctgttggc aattatcgtt gtagcgtttg ccggaccgag tttgtcccac gctatgcttg
    16261 ctgtctggct ggcattgctg ccgcgtatgg tacgttcgat ttacagcatg gtgcatgacg
    16321 aactggaaaa agagtacgtt atcgccgccc gtctggatgg cgcatcaacg ctgaatattc
    16381 tctggtttgc tgtgatgcca aacatcaccg ccgggctggt caccgagatc acccgcgcac
    16441 tgtcgatggc aattctcgat atcgccgcgc tgggctttct cgatctcggc gcacaactcc
    16501 cctcgcctga atggggagcg atgctcggtg atgcgctgga actgatttat gtcgccccgt
    16561 ggactgtcat gctgccaggt gcggcaatta tgattagcgt gttgttggtt aacctccttg
    16621 gcgatggcgt tcgtcgtgcg attattgcgg gggtggaata atgccattac tcgatattcg
    16681 taacctgacc attgaattta aaaccggtga tgagtgggtt aaagccgtcg accgggtaag
    16741 tatgacctta accgaaggtg aaatccgcgg tcttgttggt gaatccggtt ccggcaagag
    16801 tttgattgcg aaagcgattt gtggggtgaa taaagataac tggcgtgtta ctgctgaccg
    16861 tatgcgtttt gatgatatcg atttgctgcg tctctccgca cgcgaacggc gcaaactggt
    16921 tggccataac gtgtcgatga ttttccagga accgcagtcg tgtcttgacc cttcagaacg
    16981 tgtgggtcgc cagttgatgc aaaacatccc agcctggacc tataaaggcc gttggtggca
    17041 gcgttttggc tggcgcaaac gccgtgccat tgaactgctg caccgcgtgg ggattaaaga
    17101 tcacaaagat gcgatgcgca gttttcccta tgagttgacc gaaggtgaat gtcagaaagt
    17161 gatgatagcc attgcactgg cgaatcaacc gcgtctgctg attgctgacg aaccgaccaa
    17221 ctcaatggag ccaacaaccc aggcgcaaat ctttcgcctg ctgacgcgtc tcaaccaaaa
    17281 cagcaatacc actattttgc ttatcagcca tgacttacaa atgcttagcc aatgggcgga
    17341 taaaattaac gtgctttact gcggtcaaac agtggaaacc gcgccgagta aggagttggt
    17401 gacgatgcca catcatcctt atacccaggc gctgatccgc gcgataccag acttcggcag
    17461 cgcgatgccg cataaaagtc gcctcaatac gctgcccggc gctatcccac tgctggaaca
    17521 gttaccgatt ggttgtcgtc tggggccacg ttgcccgtat gcacaacgag aatgcattgt
    17581 gacgccacgt ttgacggggg cgaaaaatca tctctatgcc tgtcatttcc cgctgaacat
    17641 ggagaaagag tgagatgatc gaaacgctgc ttgaagtgcg taatttaagt aaaacgttcc
    17701 gctaccggac cggctggttt cgccgtcaga ccgtagaagc ggtaaaaccc ttgagcttta
    17761 cgctacgtga aggccagaca ctggcgatta ttggcgagaa tggttcgggt aaatccacgc
    17821 tggcaaaaat gctggcggga atgatagagc ctaccagcgg cgagttattg attgacgatc
    17881 atccactgca ttttggcgat tattccttcc gcagtcagcg tattcgcatg atttttcagg
    17941 atccttcgac ctcgttgaat ccccgtcaac gtatctcgca aattctggat tttccactgc
    18001 gcctgaacac cgacctggaa ccggaacagc gtcgcaaaca gattattgaa acgatgcgta
    18061 tggttgggct gctaccggat cacgtcagtt actatccgca tatgttggca cccggacaaa
    18121 aacagcgtct gggtctggcg cgcgcgctga tattgcgccc aaaagtcatt attgccgatg
    18181 aagcactcgc ttcactggat atgtcgatgc gttcgcagtt gattaatctg atgctggagt
    18241 tacaggaaaa acagggcatt tcgtatattt atgttaccca gcatatcgga atgatgaagc
    18301 acattagcga ccaggtgctg gtgatgcatc agggcgaggt tgtcgagcga ggcagcaccg
    18361 cggatgtgct ggcatcgccg ctgcatgaac tcaccaaacg gctgattgcc gggcactttg
    18421 gcgaagcatt gacagcggat gcgtggcgta aagatcgcta attttctgaa tcctccttcc
    18481 agattatcca cctcattctg acaagagatt aaatcttgtc agaatgaggt gatggataaa
    18541 ataaaatcaa atgcgcgtga tttaagacgc aatctcactt tgcaggaacg aaagctctgg
    18601 cgatatcttc gcagccgacg ttttggtgat ttcaaatttc gccgtcaaca tccggtgggg
    18661 agctacattc tcgattttgc ttgctgctcg gcgcgcgtag tcgttgagct ggatggtggg
    18721 cagcatgatt tggcagttgc ctatgatacc aggcgcacta gctggcttga gtcgcagggc
    18781 tggaccgtgc tgcgtttctg gaataacgag attgattgta atgaggaggc ggtgctggag
    18841 attattctgc aggaactgaa ccgccgatca ccctcaccct gaaagggcga gggggccgac
    18901 cgagccgaat agctgttgtg gtgaaaacat ggagacagtg ctggagaata ttcggcaagg
    18961 tctgaaccat cccagccatc gccataaaag ggttaggggc tgtatgagcc tgtttgttgc
    19021 tggggtaaca atatttgcac aatatggtcc cctcgcccct ctggggagag ggttagtgta
    19081 aggggaaaag cgcccaccct gccgcagcct gctccggtcg gacctagcaa ctatagctac
    19141 tcacagccag gttgattata ataaccattt atctgttcgt actgtttact aaaacgacga
    19201 atcgcctgat tttcaggcac aacaagcatc aacaataagg attaaagcta tgggttttct
    19261 ttccggtaag cgcattctgg taaccggtgt tgccagcaaa ctatccatcg cctacggtat
    19321 cgctcaggcg atgcaccgcg aaggagctga actggcattc acctaccaga acgacaaact
    19381 gaaaggccgc gtagaagaat ttgccgctca attgggttct gacatcgttc tgcagtgcga
    19441 tgttgcagaa gatgccagca tcgacaccat gttcgctgaa ctggggaaag tttggccgaa
    19501 atttgacggt ttcgtacact ctattggttt tgcacctggc gatcagctgg atggtgacta
    19561 tgttaacgcc gttacccgtg aaggcttcaa aattgcccac gacatcagct cctacagctt
    19621 cgttgcaatg gcaaaagctt gccgctccat gctgaatccg ggttctgccc tgctgaccct
    19681 ttcctacctt ggcgctgagc gcgctatccc gaactacaac gttatgggtc tggcaaaagc
    19741 gtctctggaa gcgaacgtgc gctatatggc gaacgcgatg ggtccggaag gtgtgcgtgt
    19801 taacgccatc tctgctggtc cgatccgtac tctagcggct tccggtatca aagacttccg
    19861 caaaatgctg gctcattgcg aagccgttac cccgattcgc cgtaccgtta ctattgaaga
    19921 tgtgggtaac tccgcggcat tcctgtgctc cgatctctct gccggtatct ccggtgaagt
    19981 ggtccacgtt gacggcggtt tcagcatcgc tgcaatgaac gaactcgaat tgaaataatc
    20041 attctgttgg taaatattgg gcggcgttct gccgcccgtt atctctgtta tacctttctg
    20101 atatttgtta tcgccgatcc gtctttctcc ccttcccgcc ttgcgtcagg ataacgattt
    20161 cctttacgac caaggagcgc ccatggaaca acgccacatc accggcaaaa gccactggta
    20221 tcatgaaacg caatccagta ctgcggagta tgacgttctg cctctggtcc cggaagccgc
    20281 aaaggtcagc gatccctttc tgctcgacgt gatccttgat gaagaaacgc tagctccctt
    20341 cctttcatgg ctggtccctg cgcgcgttct tgcagtggaa ttgttccctg accagcttac
    20401 cgtgacccgt tcacagacct tcaccgctta tgaacgcttg tctacggccc tgacggttgc
    20461 tcaggtttgc ggcgtccagc ggttatgtaa ctactattcg gcgcgactta cgccgctccc
    20521 cgggcctgat tcctctaggg aaagcaatca taggttggca caaatcacgc aatatgcccg
    20581 ccaactggct agctcgcctt ctattatcga caaccgatcg cgccagcatc tgaatgacgt
    20641 cggtcttact gccagggact gtgtaatcat taaccaaatc attggtttta ttggctttca
    20701 ggcgcggacc attgcgacat ttcaggctta tctcgggcac ccggtacgct ggttacccgg
    20761 tctggaaata caaaactacg ccgacgcgtc actgtttgct gatgaatcaa tacgctggcg
    20821 aagcagctat gaggtggaaa aactacctga agagtacaca aaaagttcaa cagcagaact
    20881 ttgccaactg gccgaaacac tctctctcca ccctatttca ctttcccttc tcgaaaggtt
    20941 gttaaacagc acacgggtta atacacagcc ggataataag cttgcggcgt tgttatgcgc
    21001 gcggataaat ggcagtcctg cttgttttgc cgcctgtatg gattcatcaa atgaatataa
    21061 aaaaatcagc ccccttctgc gcaagggcga aaatgaaatt aaccaatggg ctgaccgtca
    21121 ttctgttgag cacgctaccg ttcaggcgat acaatggctg acccgagcac ccgatcgctt
    21181 tagcaccgcc cagttcagcc ctttactcga acacgaacaa tcatcaacgc agattattaa
    21241 tctgctggta tggagcgggc tgtgtggctg gataaatcgc ttaaaaatcg cgttgggtga
    21301 gacatattaa ccttgccgcg tcagacagat tcgcgtaaaa ctgtcagccg ctctaatggc
    21361 caccaaaata gacaattatg tttcaggaca acccgctgct agcgcagctt aaacagcaac
    21421 tgcattccca gacgccacgc gctgaagggg tggtaaaagc cacagaaaaa ggctttggct
    21481 tcctggaagt cgacgcgcaa aaaagttatt tcattccgcc gccgcagatg aaaaaagtca
    21541 tgcatggcga ccgaattatc gcggtgatcc acagtgaaaa agaacgtgaa tccgcagagc
    21601 cagaagaact ggttgaaccg ttcctgactc gtttcgtggg taaagttcag ggcaaaaatg
    21661 accgtctggc catcgttcct gatcatccac tcttaaaaga cgccattcct tgccgcgcag
    21721 cccgtggcct gaaccacgag tttaaagaag gcgactgggc ggttgccgaa atgcgccgtc
    21781 atccgctgaa aggcgatcgt tctttctatg ctgaattgac acaatacatc acttttggtg
    21841 acgaccactt tgtaccgtgg tgggttacac ttgcgcgcca taatctggaa aaagaagcac
    21901 cagacggcgt cgctaccgaa atgctcgatg aaggtctggt tcgtgaagat ctgaccgcgc
    21961 tggattttgt caccatcgac agtgccagca cagaagatat ggatgacgcc cttttcgcta
    22021 aggcgttgcc ggatgacaaa cttcagctga ttgtggcgat tgccgatcca accgcgtgga
    22081 ttgctgaagg cagcaagctg gacaaagccg cgaaaattcg cgcattcacc aactatctgc
    22141 ctggcttcaa catccctatg ctgcctcgcg agctttctga cgatctctgc tcactgcgcg
    22201 ccaatgaagt ccgcccggta ctggcatgcc gcatgacgct ctccgctgat ggcgccattg
    22261 aagataatat cgaattcttt gccgccacca tcgaatccaa agcaaagctg gtgtatgacc
    22321 aggtttctga ctggctggaa aataccggtg actggcagcc tgaaagtgaa gcaattgccg
    22381 aacaagtccg tttgctagcg caaatttgcc aacgccgcgg cgagtggcgt cataaccacg
    22441 cactggtgtt taaagatcgc ccggattacc gctttattct cggtgaaaaa ggtgaagtgc
    22501 tggatatcgt cgccgagcct cgtcgcattg ccaaccgtat cgtcgaagaa gcgatgattg
    22561 ccgctaacat ttgtgcggcc cgcgtactgc gcgataagct cggttttggc atctataacg
    22621 tgcatatggg ctttgatccg gcgaatgccg acgcgctggc agcgttgctg aaaacgcacg
    22681 gtctgcatgt cgatgccgaa gaagtgctca cgctggacgg tttctgcaaa ctgcgtcgtg
    22741 aactggacgc gcaaccaact ggtttcctcg acagccgcat tcgtcgcttc cagtcatttg
    22801 ctgaaattag cactgaaccc ggtcctcact ttggcctcgg tctggaagca tacgccacct
    22861 ggacttcgcc gatccgtaaa tatggcgaca tgatcaacca ccgtctgctg aaagcggtta
    22921 tcaaaggcga aactgcgacg cgcccacagg atgaaatcac tgtccaaatg gccgagcgtc
    22981 gccgtctcaa ccggatggca gaacgtgatg ttggtgactg gttatacgca cgcttcctga
    23041 aagacaaagc cgggaccgac acccgtttcg cagcggaaat tgtcgatatc agccgtggcg
    23101 gcatgcgtgt gcgtttggtt gataacggcg ctatcgcctt tattccggca cctttcttac
    23161 acgctatgcg cgatgaactg gtttgcagcc aggaaaacgg cactgtacaa attaaaggtg
    23221 aaacggttta caaagtaact gacgttattg acgtcaccat tgccgaagtc cgcatggaaa
    23281 cccgcagcat tattgcgcgc ccggtcgcgt aatctccttt cacggcctat tcctcatgga
    23341 tgggccgttt atttccccgc tctaccttcg ttatatccag gcagattttt taactgactt
    23401 tcgtttgaaa actggcgttt ttccaaaact ggattacaaa taaatatata aaaaaacaat
    23461 gcgtttagcc gccgttaatt tcatgtaagt ca
//
LOCUS       DADKRT010000051        22931 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.051, whole genome shotgun sequence.
ACCESSION   DADKRT010000051 DADKRT010000000
VERSION     DADKRT010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22931
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.051"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..745)
                     /locus_tag="JQ356_001709"
     CDS             complement(<1..745)
                     /locus_tag="JQ356_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4621834.1"
                     /translation="MAMSEQTQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI
                     LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS
                     GLVLLALAGSVGAVLLAAALVGTSSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
                     SSLGPLLTAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN
                     PLPRNKVVLAVSILLILIFSKYFYMASISS"
     gene            963..2615
                     /locus_tag="JQ356_001710"
     CDS             963..2615
                     /locus_tag="JQ356_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY4621835.1"
                     /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG
                     HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
                     GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
                     QDLKIAVIGLTTDDTAKIGNPEYFTDVEFRKPADEAKLVIQELQQTEKPDIIIAATHM
                     GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQAPVCMAAENKKQVDYVPGTPCK
                     PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
                     YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA
                     QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
                     AQMKPDSGAYPQFANVSFVTKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR
                     LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ"
     gene            complement(2652..3131)
                     /gene="ybaK"
                     /locus_tag="JQ356_001711"
     CDS             complement(2652..3131)
                     /gene="ybaK"
                     /locus_tag="JQ356_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HAY4621836.1"
                     /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV
                     YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMAAQRSTGYLVGG
                     ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
     gene            complement(3335..4129)
                     /locus_tag="JQ356_001712"
     CDS             complement(3335..4129)
                     /locus_tag="JQ356_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621837.1"
                     /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS
                     HDMTPLPTRLLKKLKNADALIVEADVSTSDTPFANLPTCEALEERINEEQLQNLQHIS
                     QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
                     AENQITMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNNITLPNTFSQ
                     SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
     gene            4267..4608
                     /locus_tag="JQ356_001713"
     CDS             4267..4608
                     /locus_tag="JQ356_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY4621838.1"
                     /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSTL
                     INNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
                     ARREERAKKVA"
     gene            complement(4823..7327)
                     /gene="copA"
                     /locus_tag="JQ356_001714"
     CDS             complement(4823..7327)
                     /gene="copA"
                     /locus_tag="JQ356_001714"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HAY4621839.1"
                     /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
                     GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
                     LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
                     AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL
                     WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPLW
                     FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTAEGEK
                     SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGESVHAGT
                     VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALI
                     SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
                     DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
                     AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNPALLNDQQVDTKAIEADISA
                     QASQGATPVLLAIDGKVVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
                     IAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
                     SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
                     FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
     gene            7589..8521
                     /gene="glsA"
                     /locus_tag="JQ356_001715"
     CDS             7589..8521
                     /gene="glsA"
                     /locus_tag="JQ356_001715"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HAY4621840.1"
                     /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAVVA
                     IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
                     ALELHGGKPLSPLVNAGAIATTSLINAENIEQRWQRILHIQQQLAGEQVALSDEVNQS
                     EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGLN
                     PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
                     AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
     gene            8524..9816
                     /locus_tag="JQ356_001716"
     CDS             8524..9816
                     /locus_tag="JQ356_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY4621841.1"
                     /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
                     STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
                     AVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
                     VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
                     VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV
                     GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
                     LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
                     VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV"
     gene            9941..10348
                     /locus_tag="JQ356_001717"
     CDS             9941..10348
                     /locus_tag="JQ356_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CueR"
                     /protein_id="HAY4621842.1"
                     /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
                     NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
                     DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
     gene            complement(10349..10807)
                     /locus_tag="JQ356_001718"
     CDS             complement(10349..10807)
                     /locus_tag="JQ356_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HAY4621843.1"
                     /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL
                     VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV
                     LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS"
     gene            complement(10804..11721)
                     /locus_tag="JQ356_001719"
     CDS             complement(10804..11721)
                     /locus_tag="JQ356_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HAY4621844.1"
                     /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM
                     MPLEASSLMGSIAGIAELVKDSANKRTQP"
     gene            11867..12544
                     /gene="fetA"
                     /locus_tag="JQ356_001720"
     CDS             11867..12544
                     /gene="fetA"
                     /locus_tag="JQ356_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HAY4621845.1"
                     /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC
                     GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
                     FPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
                     LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
                     EARYELA"
     gene            12531..13310
                     /gene="fetB"
                     /locus_tag="JQ356_001721"
     CDS             12531..13310
                     /gene="fetB"
                     /locus_tag="JQ356_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HAY4621846.1"
                     /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAI
                     IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG
                     AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL
                     SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
     gene            complement(13373..14227)
                     /gene="cnoX"
                     /locus_tag="JQ356_001722"
     CDS             complement(13373..14227)
                     /gene="cnoX"
                     /locus_tag="JQ356_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HAY4621847.1"
                     /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI
                     LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
                     LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL
                     ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(14288..15097)
                     /gene="ybbO"
                     /locus_tag="JQ356_001723"
     CDS             complement(14288..15097)
                     /gene="ybbO"
                     /locus_tag="JQ356_001723"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY4621848.1"
                     /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
                     GCRKPDDVERMNNMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP
                     LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
                     ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
                     TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG"
     gene            complement(15087..15710)
                     /gene="tesA"
                     /locus_tag="JQ356_001724"
     CDS             complement(15087..15710)
                     /gene="tesA"
                     /locus_tag="JQ356_001724"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HAY4621849.1"
                     /translation="MNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSA
                     SAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR
                     GFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS"
     gene            15681..16367
                     /locus_tag="JQ356_001725"
     CDS             15681..16367
                     /locus_tag="JQ356_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY4621850.1"
                     /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
                     LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
                     LVNGQLQEEA"
     gene            16364..18376
                     /locus_tag="JQ356_001726"
     CDS             16364..18376
                     /locus_tag="JQ356_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000561880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4621851.1"
                     /translation="MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLS
                     QQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAV
                     DDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQE
                     PDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLK
                     PEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAI
                     LKTLGAGRTQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASL
                     WPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSMVVVL
                     LLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMQLNVLCRMTLKSLPLRLAVSRLLRQP
                     WSTLSQLSAFSLSFMLLALLLVLRCDLLDRWQQLPPESPNYFLINIATEQVAPLKAFL
                     AEHHIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNWP
                     PKADEVSMEEGLAKRLNVALGGTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPE
                     GALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVG"
     gene            18377..18775
                     /locus_tag="JQ356_001727"
     CDS             18377..18775
                     /locus_tag="JQ356_001727"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HAY4621852.1"
                     /translation="MLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRT
                     LGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLP
                     CSGALLLSLFGGWLGARLVKGKALFRQFAG"
     gene            19204..22931
                     /locus_tag="JQ356_001728"
                     /pseudo
     CDS             19204..22931
                     /locus_tag="JQ356_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415030.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
BASE COUNT         5291 a         6002 c         6481 g         5157 t
ORIGIN      
        1 agctgctgat gctcgccata tagaaatatt tcgagaaaat gaggattaac agaatgctga
       61 ctgccagtac cactttgttg cgcggcagtg gattgattat cgtcgctttg ggttttcctt
      121 tattcattcg gtgctgtgcc gagtaccaac ggctaatttg cgccaacacc acgatcgcca
      181 gcagtgccgc aagcacaaac caggcaacgt tgcctttgcc ataaggcgcg ataatcaccg
      241 ccgtcagcaa gggtcccagg gaactgccaa agttgccgcc gacctgaaag atagattgcg
      301 ccaggccatg ccgcccgccg gaagccatac gggctacgcg agaagattcc ggatgaaaga
      361 ccgatgaact ggtaccgacc agcgccgccg ccagcagaac tgcgccaaca ctgcccgcca
      421 gcgcaagcag caccagacca cttaaggtaa agcacatgcc aattggcaac gaccacggca
      481 tcggatattt atcggtccag tagccgacca ctggttgcag tagcgaagag gcgagctgga
      541 aggtgagggt tatcatgcca atctgcataa atgtcagaga aaattctgac tgaagcagag
      601 gataaatcgc cagaatcagc gattggatca tgtcgttcag cagatgtgag aggctgatag
      661 cacctaaaat accaaacgat gttcgggcct tggtcgttga cgcagccgcg cccgccacag
      721 gctgggtttg ttcactcatt gccataggaa agtcactttt tcagggttgc gatgtaaaga
      781 atgatcttat ttgtgattat tacccgacta acatacctgt aagcgtcgcc tgaaggaagt
      841 ctcaacgccg aatacagaat ttctaatctg gatgcagatt tatcttcacc ggacgcagac
      901 ttgtctatta tgttgcgtca tactattttt caacacgttg aaatcaggtc agggagagaa
      961 gtatgaaatt attgcagcgg ggcgtggcgt tagcgctgtt aaccacattt acactggcga
     1021 gtgaaactgc tctggcgtat gagcaggata aaacctacaa aattacagtt ctgcatacca
     1081 atgatcatca tgggcatttt tggcgcaatg aatatggcga atatggtctg gcggcgcaaa
     1141 aaacgctggt ggatggtatc cgcaaagagg ttgcggctga aggcggtagc gtgctgctac
     1201 tttccggtgg cgacattaac actggcgtgc ccgagtctga cttacaggat gccgaacctg
     1261 attttcgcgg tatgaatctg gtgggctatg acgcgatggc gatcggtaat catgaatttg
     1321 ataatccgct caccgtatta cgccagcagg aaaagtgggc caagttcccg ttgctttccg
     1381 cgaatatcta ccagaaaagt accggcgagc gcctgtttaa accatgggcg ctgtttaagc
     1441 gtcaggatct gaaaattgcc gtcattgggc tgacaaccga tgacacagca aaaattggta
     1501 acccggaata cttcactgat gtcgaatttc gtaagcccgc cgatgaagcg aagctggtga
     1561 ttcaggagct gcaacagaca gaaaagccag acattattat cgcggcgacc catatggggc
     1621 attacgataa tggtgagcac ggctctaacg caccgggtga tgtggagatg gcacgcgcgc
     1681 tgcctgccgg atcgctggcg atgatcgtcg gtggtcactc gcaagctccg gtctgcatgg
     1741 cggcagaaaa caaaaaacag gtcgattacg tgccgggtac gccatgcaaa ccagatcaac
     1801 aaaacggcat ctggattgtg caggcgcatg agtggggcaa atacgtggga cgggctgatt
     1861 ttgagtttcg taatggcgaa atgaaaatgg ttaactacca gctgattccg gtgaacctga
     1921 agaagaaagt gacctgggaa gacgggaaaa gcgagcgcgt gctttacact cctgaaatcg
     1981 ctgaaaacca gcaaatgatc tcgctgttat cgccgttcca gaacaaaggc aaagcgcagt
     2041 tggaagtgaa aataggcgaa accaatggtc gtctggaagg cgatcgtgac aaagtgcgtt
     2101 ttgtacagac caatatgggg cggttgattc tggcagccca aatggatcgc actggtgccg
     2161 actttgcggt gatgagtgga ggaggaattc gtgattctat cgaagcaggc gatatcagct
     2221 ataaaaacgt actgaaagtg cagccattcg gcaatgtggt ggtgtatgcc gacatgaccg
     2281 gtaaagaggt gattgattac ctgaccgccg tcgcacaaat gaagccagat tcaggtgcct
     2341 acccgcaatt tgccaacgtt agctttgtga cgaaagacgg caaactcaac gacctgaaaa
     2401 tcaaaggcga accggtcgat ccggcgaaaa cttaccgtat ggcgacatta aacttcaatg
     2461 ccaccggcgg tgatggctat ccgcgccttg ataacaaacc gggctatgtg aataccggct
     2521 ttattgatgc cgaagtgctg aaagcgtata tccagaaaag ctcgccgctg gatgtgagtg
     2581 tttatgaacc gaaaggtgag gtgagctggc agtaatccga aagtgccgga tatttgcatc
     2641 cggcacaatg cttaatcgcg gcgggcgata tcagcaaatt tggcatcgag gatcttcgcc
     2701 agatcgcctg ccgccagttc gatatccagt ccgcgcttgc cgccagaaac ataaatagtg
     2761 gcaaattctt gtgcgggggc gtcgataatc gtcggcagac gttttttctg ccccagtggg
     2821 ctaatccccc caaccaggta tcccgtcgaa cgctgcgcgg ccatcggatc ggccatctca
     2881 actttcttgg cacccagcgc ttttgctact tttttaagat ccagttgacc tgcgaccggc
     2941 gtaacggcca ctgccagatg tttcatatca ccgttcactg ccaccagtag cgttttgtag
     3001 acttgatccg gattcaaacc taattttttg acgacttcat cgccaaaatt ggtttcagcc
     3061 ggatcgtgct cgtaggtatg gatttgaaac gaaatcttgt ttttttcgag taatttaact
     3121 gcgggtgtca tggtaatttt cctgccttaa acaaaaaaac gaagcaagca tacgcctgat
     3181 ggcggtccaa aaaaaagagt catcttgcct aagagtattg gcaggatggt gagattgagc
     3241 gacaatcgag ttacaccgtc gcttaaagtg acggcataat aataaaaaaa tgaaattcct
     3301 ctttgacggg ccaatagcga tattggccat ttttttagcg caacatttgc ggcaaattcc
     3361 cttctccata caggtgtagt gcaccgaccg cgaccacata tcgccccggc ggcatggcgc
     3421 gtaatttatc ccgccaggcg agatttcgct gatgcatcag cacatcgtac agcgactgac
     3481 tgaacgtatt gggcagcgtt atattattat tttgcggagg tgcattcagc caccagctca
     3541 tcatttgttg cagcaaccgt gcgttggtat gccagtgggt cagcgtatcg tccagcagcg
     3601 ccagtccttt gtcagggagc tggagcaaca tggtaatctg gttttcagcc ccttccagtt
     3661 caatcacggg tttatgttgt tgcttcgccg cctgcaataa ctggtaatcg ataccgtatt
     3721 ctgcccgcag ccccagtttt tgtgcctgcg tcgcctgaag aaccatcgcg atttgccaca
     3781 gcggttgagt agaaaagagc gacggagaaa tgcccatctc ctggctaatg tgctgcagat
     3841 tttggagttg ctcctcgtta atgcgctctt ccagcgcctc gcaagtaggc aaattagcaa
     3901 aaggcgtatc gctggtggaa acatccgcct cgacgatcag cgcatcggcg tttttgagct
     3961 ttttgagcaa acgggtgggc aggggagtca tatcgtggct acccatatga atactgccaa
     4021 tcagatgaaa atggcgattg ccgggaaggg tgatatcgat ggcaggccag gtgtaatgat
     4081 taccgcgcag cgcggcccaa agcgttttta cccggtacaa cagatccata cgacctccct
     4141 ttgtgaaata tcatgctagc gcgcggtgag ggatggcgca aatggagttg gggacttgtt
     4201 taatgtgttt gtatgattca gtatgttctt gcatcgctat tcacagggaa gcaacagtta
     4261 aaaaccatga aacaggcaac aagaaaaccg acgacacccg gagatattct tctctatgaa
     4321 tatctggaac cgctcgattt gaaaatcaat gagttagcag agttgctgca tgttcatcgt
     4381 aatagcgtca gtacactgat caataataat cgtaaactca ccactgagat ggcattccgt
     4441 ctggcgaaag tttttgatac cacagtcgat ttttggctaa acctccaggc ggcagttgat
     4501 ctttgggaag ttgaaaacaa catgcgcacc caggaagaat tgggacggat tgaaacagtg
     4561 gctgaatatt tggcacgccg tgaagagcgt gcaaaaaagg tcgcgtaagg ccaaaacatc
     4621 gcttcatctc gtaggccgga taaggcgttc acgccgcatc cggcatccga gcaccatagc
     4681 ctgatgcgac gcttacccgt cttatcaggc ctacaaacct gtgcctgaac cgtaggccgg
     4741 ataaggcgtt tacgccgcat ccggcagtca tgcgtcgatg ccaaatgcgc cgccctaaag
     4801 cagcgcatcc gcaatgacgt acttattcct tcggtttaaa ccgcagcaac cggttggcgt
     4861 tactcactac ggtaatcgac gagagcgcca ttgccgctcc ggcaactacc gggttaagca
     4921 gtgttccagt aaacggccac aaaataccag cggcgaccgg aataccaatg ctgttgtaga
     4981 taaacgcacc gagcaggttc tgcttcatat tgcgcagcgt tgcgcgggaa atcgcgagcg
     5041 catctgcaac acccatcagg ctatggcgca tcagggtaat cgccgcggtt tcaatggcaa
     5101 catcactgcc gccacccatc gcaataccga catccgcctg agccagcgct ggcgcgtcgt
     5161 taatgccgtc gcccaccatt gccacctgac gtccttcact ttgcagacgt ttgatcgctt
     5221 cggctttacc gtctggcagc accccggcga ttacctcatc aatccctgct tctttggcga
     5281 tcgcattggc ggtggttggg ttatccccgg tcaacatcac cagacgatat cccgctttat
     5341 gcaggcgttg cagcgccgcc acgctatcac tacgcaacgg atcgcgtaca gccagcaggg
     5401 ctactacttt cccgtcaatc gccagcagca caggcgttgc tccttgcgat gcctgagctg
     5461 aaatatcggc ttcaatcgct ttagtatcga cttgctggtc atttaacagc gccggattac
     5521 ccagcaataa cgcatgacct tcagcttcac cgcttacgcc cagcccgcgc aatgtgcgga
     5581 aaccgttgac ctgcggcagc tgcatatcgc ctgctttatc gaggatcgct cgtgccagcg
     5641 gatggctgga accttgctcc agcgccgccg ccagacgcaa tgcttgcgct tcatcaacat
     5701 cagcaaatgt ttttactgcg acaacctgcg gcttcccttc ggtcagcgtc ccggttttat
     5761 cgaacacgac ggtatcgagt gtactggcgc gttgcagcgc gtcggcgtcc cgcaccagca
     5821 cgccaaactc agccgcccgc ccgacgccgg aaataatcga cattggcgtc gccagcccca
     5881 gcgcacacgg acaggcaata atcagcaccg tggtggctat caccagggta tagacaatct
     5941 gcggtgccgg accaaagaaa taccagattg ctgcactgat cagcgcaatc accactacta
     6001 ccggcacaaa tacggctgag attttatccg ccagctgacc gatttctggc ttgctgctct
     6061 gggcctggcg caccatgcga ataatccttg acagcgtggt atggctgcca accgcactgg
     6121 cgcgaaatag cacgctaccg tcctgtacca ctgtcccggc atggacgctt tcgccttcgc
     6181 ctttttgctg cgggattggt tcgcccgtca gcatcgcttc atccagccat gcttcgccct
     6241 gggtaatctc gccatctacc ggcacgcgat cgccggtcgt caggcgcagt aacatccctg
     6301 gctgaacttc cgccagcggc acgctttttt caccctctgc ggtgaccact cgcgccgtcg
     6361 gtggggttaa atcgagtaat ttctccagcg ccttagaaga acgctgacgc gcgcgcgctt
     6421 ccagcatatg gccgagatta atcagaccga taatcatcgc actggcttca tagtaaagat
     6481 gccgcgcttc catcgggaac cacagcggcc acaggttgac gctcatcgaa tagagccacg
     6541 ccacacccgt acccagcgcc accagcgtat ccatcgtcgc cgcaccgttc agcaggcttt
     6601 tccacgcgct gcggtaaaaa tgcccgccgg cgaaaaccat taccgccagg gttatcaggc
     6661 cgataactaa ccacaggctg cggttgtcag cggtgaccat catgttatcg ccgatcatcc
     6721 cccagaccat taccggaata cccaccgcca gtgcgacaat cgcctgccag cggaagcgct
     6781 tcatcgtagc gacggcggtt tcctgctggc gctcgcggcg tttcgcgtca tcttcaatcg
     6841 cttccgcgcc gtagcccgct ttttccaccg cctgcactaa atcttgtggg gaggcactgc
     6901 ccatcaccag cgcagtacgc tccgccaggt ttacccgtgc ctgagtgacg cccggtacgc
     6961 tttgcagcgc attttgtacg cgggtgacac agctggcgca gctcatgccg ctcagcagca
     7021 actgctggct gtcatcgtca tcggcggtcg ctgccggaag cgcctcagaa accgctgtca
     7081 gtgcttccga cgggattgat gactccgcca gcggtttagc ctttgggtgg cttacagatg
     7141 cgtcataacc cgcttgtttg atggtttcga tcagctgttc tgcactggca gtcccggtaa
     7201 cgtgcgcttc agtgatagac acatccgctt gttccacatc cgggcgctgt tcgagacttt
     7261 ctttcacgcg tttaacgcag tgaccgcagg acaggccgtc cagggtcagg tcgatagttt
     7321 gtgacataaa acactccttt aagacagttt tgactggctg tgataaaggt taaaccttcc
     7381 agcaagggga aggtcaagaa attaataaac caggcgggta aaagtccgta aagattaaaa
     7441 aatcggctcg atttgcatca ggattagaca tttatttctt tgttttcctg tagttaagtt
     7501 gctggtgcta agttaaatca ggatgcctga aaatcggcac cggggtgagg aattacctcc
     7561 cgcatctata aaaaggagtt aacaaaagat gttagatgca aacaaattac agcaggcagt
     7621 ggatcaggct tacacccaat ttcactcact taacggcgga caaaatgccg attacattcc
     7681 ctttctggcg aatgtaccag gtcaactggc ggtagtggct atcgtgacct gcgatggcaa
     7741 cgtctatagt gcgggtgaca gtgattaccg ctttgcactg gaatccatct cgaaagtctg
     7801 tacgttagcc cttgcgttag aagatgtcgg cccgcaggcg gtacaggaca aaattggcgc
     7861 tgacccgacc ggattgccct ttaactcagt tatcgcctta gagttgcatg gcggcaaacc
     7921 gctttcgcca ctggtaaatg ctggcgctat tgccaccacc agcctgatta acgctgaaaa
     7981 tattgaacaa cgctggcagc gaattttaca tatccaacag caactggctg gtgagcaggt
     8041 agcgctctct gacgaagtca accagtcgga acaaacaacc aacttccata accgggccat
     8101 agcctggctg ctgtactccg ccggatatct ctattgtgat gcaatggaag cctgtgacgt
     8161 gtacacccgt cagtgctcca cgctcatcaa tactgttgaa ctggcaacgc ttggcgcgac
     8221 gctggcggcg ggtggtctga atccgctgac gcataaacgc gttcttcagg ccgacaacgt
     8281 gccgtacatt ctggccgaaa tgatgatgga agggctgtat ggtcgctccg gtgactgggc
     8341 gtatcgcgtt ggtttaccgg gcaaaagcgg tgtaggtggc ggtattctgg cggtcgtccc
     8401 tggcgtgatg ggaattgccg cgttctcacc accgctggac gaagaaggta acagtgttcg
     8461 cggtcaaaaa atggtggcat cggtcgctaa gcaactcggc tataacgtgt ttaagggctg
     8521 atcatgatga acacggaagg taataacggt aacaaacccc tcggtctatg gaatgtcgtt
     8581 tccatcggta ttggggcaat ggtgggggcg gggatcttcg cgctgctggg gcaggctgcg
     8641 ttgctaatgg aagcctcgac ctgggtcgcc tttgcttttg gcggtattgt ggcgatgttt
     8701 tccggttatg cctatgcgcg tctgggggcg agctatccca gcaatggcgg cattatcgac
     8761 ttctttcgtc gcggattagg caacggcgtc ttttcgctgg cgctctcgtt actgtacctg
     8821 ttgacgctgg cggtgagcat cgccatggtc gcccatgctt ttggcgctta tgccgtgcag
     8881 tttttgcatg aaggcagcca ggaggagcac cttattttgc tctacgcgtt ggggagcatt
     8941 gcggtgatga cgcttttcaa ctccttaagc aaccatgcgg tagggcggct ggaagtgatc
     9001 ctcgtcggca ttaaaatgat gatcctgtta ttgctgatta ttgccggtgt ctggtcgctg
     9061 caaccagcgc atatttccgt ctctgcgccc cccagctccg gtgcgttctt ctcctgtatt
     9121 gggataactt tccttgccta tgcgggcttt ggcatgatgg cgaacgcggc ggataaagtg
     9181 aaagatccgc aggtcattat gccacgggcg tttctggtgg cgattggcgt taccacgttg
     9241 ctttatatct cgctggcact ggttttgctt agcgatgtat cggcattaga gttagaaaaa
     9301 tatgccgata ccgccgtagc gcaggctgct tctccgctgc tcggacatgt gggttatgtg
     9361 atcgtcgtca tcggcgcttt actggcgacg gcttcagcca ttaacgcgaa cctgttcgcc
     9421 gtgtttaaca tcatggacaa catgggcagc gaacgcgaac tgccgaagct aatgaataaa
     9481 tccctgtggc ggcagagtac ctggggcaac atcattgtcg tggtgttgat tatgctgatg
     9541 acggcggcac tgaatttagg ctcactcgcc agcgttgcca gcgccacctt tttgatttgc
     9601 tacctggcgg tgtttgtggt ggcgatccgc ctgcgtcatg atattcacgc ctcgttgccg
     9661 attcttatcg ttggtacgtt ggtgatgttg ttggtgatcg ttggctttat ctacagtctg
     9721 tggtcccagg gtagccgtgc gttgatatgg attattggct cactcttact cagccttatt
     9781 gtggcaatgg tcatgaagcg caataaaacc gtataacatc tctctgtgcg cagtacttcc
     9841 tgtattattg tggtggcggt cgatattcgc actggcaaaa aaacgtgctt gaatatctgt
     9901 tgaaaccctt taacaaagca caggaggcgt tgcgcgaacg atgaacatca gcgatgtagc
     9961 aaaaattacc ggcctgacta gcaaagccat tcgcttctat gaagagaagg ggctggtgac
    10021 gccgccgatg cgcagcgaaa acggttatcg cacctacacg cagcagcatc tcaacgaact
    10081 gaccttactg cgccaggcac ggcaggtggg ctttaacctg gaagagagcg gcgagctggt
    10141 gaatctgttt aacgacccgc agcggcacag cgccgacgtc aaacggcgca cgctggagaa
    10201 ggtggcggag atcgaacgac acattgagga gctgcaatcc atgcgcgacc agctgctggc
    10261 actggcgaat gcctgccctg gcgatgacag cgccgactgc ccgattatcg aaaatctctc
    10321 cggctgctgt catcatcggg cagggtgatt aagacgagac ggctcggata tgtagggtta
    10381 tcccttctat cgcaatgact tcaacatgcg tacctgcacc gagatcctcg ctggcgctga
    10441 caggccatga actgtcaccg acgcgcatat gaccgcgccc gttgaccagc ggagattcca
    10501 gcacaaaacg tcggccaatc agctgctgcc cgcgctggtt taaatgacta tcgctgtgct
    10561 tttgttcgcg cacccgccgc gacaaccatt tccaccacag ccaggcggcg agcagcgtca
    10621 ggatggcaaa cattacccct tgccactccc aacccagcgg caccagccag accaccaggc
    10681 cggtaatcac cgctgccacg ccgctccaca acaaataacc atttccgccc agcatctcgg
    10741 ctgccagcag caaaccgccg agactgagcc agaaaatatg tggatgaacg accattaact
    10801 ccatcatggc tgagtccgtt tgttggcgct gtctttcacc agttcggcaa tcccggcaat
    10861 cgaccccatc aggctgctgg cctctaatgg catcatcact actttgctgt tactggagga
    10921 accgatctgc tgtaacgctt cggtgtattt ctgcgctacg aagtagttca ccgcctgaat
    10981 atcaccggag gcgatagctt cagacaccat tttggtggcg cgggcttctg cttcggcgga
    11041 acgttcacgc gcttcagcct gtaaaaacgc cgactgacgt tcgccttccg ctttcaggat
    11101 ttgtgactgt ttttcacctt cggctttgag gatttccgcc tgacggatcc cttccgcttc
    11161 aagaatgtaa gcgcgtttgg tacgttccgc tttcatctgc gcgttcattg aagagataag
    11221 ctctgccggt gggcgcacgt cgcgaatttc aatacgggtg actttaatcc cccacgggtt
    11281 ggtggcttca tcgacaatac gcagcaggcg tgagttgatg ctgtcgcgct gagagagcat
    11341 ttcgtcaagt tccattgaac ccaacacggt acggatgtta gtcatggtca ggttgatgat
    11401 cgccagctcc agattgctga cttcataggc agcgcgtggc gcgtcaatca cctgaataaa
    11461 acagactgcg tcgatggtaa cgttggcgtt atctttcgag ataacttcct gggaagggat
    11521 atcgagcact tgctccatca tattgatctt gcgaccaatg cgatccataa acggcaccac
    11581 cagactgagc cccggctgta acgttttggt atagcgacca aaacgttcta ccgtccattg
    11641 atagccctgc ggcacgattt tgacgcccgc gccgacaatg accagcgcga caaaaatgag
    11701 aatcgggata aagataagca tcggaaaaac ctcctgttgt accgtccata atcagcaaaa
    11761 ttgctgcttg attaaacaaa ttatacctga ttactgaaag agagttcccc cttattcctg
    11821 cgaaggataa actgttttta gtaaaaatca gaaaaaggga acagcgatgc aggaaaatag
    11881 tcctttgctt cagctacaaa acgtaggata tctggcgggt gatgcgaaga ttcttaataa
    11941 catcaatttt tcgctgcgtg ctggcgaatt taagttaatt accggtcctt ctggttgtgg
    12001 caaaagtacg ctgctaaaaa tagttgcttc attgatcagc ccaaccagcg gaacgttact
    12061 gtttgaaggt gaggatgtca gcacactaaa gccagaaatc taccgccaac aagtctctta
    12121 ctgcgcccag acaccgacgc tgtttggcga tacggtatac gataatctga tctttccttg
    12181 gcagatccgt aaccggcagc ctgacccagc catttttctc gattttctcg aacgcttcgc
    12241 cttgccggac agcattttga cgaaaaatat cgccgagcta tctggtggtg aaaaacaacg
    12301 catctcactg attcgtaacc tgcaatttat gccgaaggtt ttattgctgg atgaaatcac
    12361 cagtgcgctg gatgaaagta ataaacataa cgttaatgag atgatccatc gttatgtgcg
    12421 cgagcaaaat attgccgtgc tgtgggtgac acacgataaa gacgaaatta atcatgcgga
    12481 taaagtgatt acactgcaac cgcatgccgg agaaatgcag gaagcacgct atgaactcgc
    12541 ataatattac taacgaatca ttggcactgg cattaatgct ggtggtggtg gcaatcttaa
    12601 ttagccataa agaaaaactg gcgctggaga aagatatttt ctggagcgtc gggcgcgcga
    12661 taattcagct gattattgtc ggctatgtgc tgaagtatat tttcagcgtg gatgatgcca
    12721 gcctgacatt attgatggtg ttatttatct gctttaatgc ggcgtggaac gcgcaaaaac
    12781 gcagtaaata tattgctaaa gcttttatct catcgtttat tgccattacg gttggggcgg
    12841 gaattaccct ggcggtgctg attctctcag ggtcgattga atttatcccg atgcaggtga
    12901 tccctatcgc cgggatgatt gccggtaacg ccatggtagc ggtggggttg tgttacaaca
    12961 atttagggca acgggtcatt agcgaacagc aacagattca ggagaaactg agtcttggcg
    13021 cgacgccgaa gcaggcttca gcgatattga ttcgcgacag tattcgcgcg gctttaattc
    13081 cgacggtcga ttcagcaaaa acggttggct tagtgagttt accaggaatg atgtccgggc
    13141 tgatatttgc cgggattgat ccggtgaagg cgattaaata tcagattatg gtgaccttta
    13201 tgctgctctc aaccgccagc ttgtcgacca ttattgcctg ctatttaacc tatcgtaagt
    13261 tttataattc gcgccaccag ttggtggtga cgcaattgaa gaagaaatga tgcgatgccg
    13321 gatgcgcagc atcgcatccg gcgttgtggt tcatgtgccg aacaacggaa tatcaataca
    13381 acaatgcata cagctggcgg cgatacttcg acgccagtgc atcacccgta cccagcgcag
    13441 cgaggatctc ctggaacgtt ttacgcgtct gaccgtctgc ggcggtgaga tctttacgca
    13501 gatgcccgaa cagcaactcc agcgcctctt cattgcgccc aacctgatgc agttgcagcg
    13561 ccagttgcgt cgccagtgcg gcatcttctg gattctccgc cacctgctgt tgcaactgtt
    13621 gaatttccgg cgtatcagcc gcctgcttca gcagttcgat ttgcgccacc agcccctggt
    13681 agcgggtgtc ctgatcctgc aacggaatgg ttttcagcac cgcttccgca tcttcagaac
    13741 ggttcagcgc aatcagcgtt tctgccagca gcaggccgat ctccccgttc tgattcgaca
    13801 actgccaggc gtctttcagc aatggcaggg catcggtgta attgccttcc tgcatcagtt
    13861 gcatcgcctg ctgcgctttc agctcttctt cgcgcggcag cactttatcc agcagggcgc
    13921 ggatcgcctc ttccggttgc ggcccctgga agccatctac cggttgcccg ttctggaaca
    13981 gatacacggt cggaatcgcg cgcagaccaa actgggcggc aatcatctgc tccgcgtcgc
    14041 agtccagctt cgccagaata aattgcccgt tgtactgcgc cgcgaggctt tccaggatcg
    14101 gggttaactg caaacagtgc tggctacgtt cagaccaaaa atagaacagc accggagtgg
    14161 tcatcgactg ttcaagaacc tgttgcaggt tagattcgtt aatgttgaca atattttcta
    14221 cggacatgga gtcgctctct gttgtcgata ttttctttga catgggggct taagcgcgcg
    14281 cttcaactca cccctgcaat attttgtcca tcacgcgccc aggcagcagg cgcttgagca
    14341 ccattactgc ccaggtcacc agcgttaccg gatagcgcat cttcggcttc tcgctaataa
    14401 aagcatggcg cactttgtcg accaccgctt ccggtcccaa cgtaaagcgg gcggcgatgc
    14461 cgggattttc gactggttta tcactttgcg tctggttgac gttgtcggtg aagcgagtac
    14521 gaatgggacc gggttcgatc aggctgactt taattccgct gtggcgtagc tccatgcgca
    14581 gcgcgtctga ccacgcctcc agcgcatatt tactggccgc gtaagcgcca cgacccggcg
    14641 tggagattaa tcccatcacc gatgatgtca tcacaatacg cccttcaccg tgcggtaaca
    14701 tcgcgggtaa caggcgcatg gtgagctggt gtgcgccgaa aaagttggcg gaaaactgct
    14761 gttccatctg cgcacggctg atggtggaaa gggggccata catgccgaat ccggcattgt
    14821 taaagatccc atacagacaa ttatcggtca gggcgatcac ctcgtctgct gcgcgatcaa
    14881 cactttctgg tgaatccaga tcgatcaaca cgccggtaaa tcccatgttg ttcatacgct
    14941 caacatcatc cggttttcgg caacctgcca gcacatgaaa accctggcgt tttaattcga
    15001 gcgcgctttc caggccaatt ccactggaac atccggtaat taagaccgat ttttgcataa
    15061 ctttacctgt caggatctcc gttgctttat gagtcatgat ttactaaagg ctgcaactgc
    15121 ttcgccatcc agtcggcaat aaacggctgg gcgtcgcggt tgggatgaat accgtcatcc
    15181 tgcatccatt gtggcttgag gtagacctct tccataaaaa agggcagcag cggaacatca
    15241 aactctttgg cgagtttggg gtaaatggcg ctaaaggctt cattataacg gcgaccatag
    15301 tttgcaggca gacgtatttg cattaacaat ggttcagcgt tggcggcttt gacatcctgc
    15361 aaaatctggc gcagcgtttg ctcggtttgc tgtggctgaa aaccacgcaa accgtcattg
    15421 ccgcccagtt caaccagcac ccagcgcggc tgatgctgtt tcagcagagc cggaaggcgc
    15481 gccagtcctt gttgcgaggt gtcgccgctg atgctggcat taactaccga cgttttactc
    15541 tgccacttat cattcaacaa ggcaggccag gccgcgctgg cagacattcg atacccggcg
    15601 ctcaggctat cacccagaat caataacgtg tccgctgcgg cggcacggaa ggttaacagg
    15661 accaggaaca ggaagggcaa atgccagcgg aaaacattgt tgaagttcat catcttaaga
    15721 agtccgtcgg tcagggggag catgaactct ccatcctcac cggagttgag ctggttgtca
    15781 aacgtggcga gaccatcgca ctggtgggcg agtcgggatc gggtaagtca accttgctgg
    15841 cgatcctcgc cgggcttgat gacggcagca gtggcgaagt gagtctggtg ggacaaccgc
    15901 tacataatat ggacgaagaa gcgcgggcaa agttgcgcgc gaagcacgtc ggctttgttt
    15961 ttcagtcatt tatgttaatt cctaccctta acgcgctgga aaacgtcgag cttccggctc
    16021 tgctgcgcgg tgagagtagc gcggaaagtc gtaacggggc gaaagcgttg ctcgaacagt
    16081 tagggctggg taaacgtctg gatcatcttc cggcacagct ttccggcggt gaacagcaac
    16141 gagtggcgct ggcacgagcc tttaatggtc gacctgatgt gctgtttgcc gacgaaccca
    16201 ccggcaacct tgaccgccag acgggcgata aaattgccga cctgctgttt tccctcaacc
    16261 gtgaacatgg caccacgttg attatggtga cccacgacct gcaactggcg gcacgctgcg
    16321 accgctgctt acggctggtg aacgggcagt tgcaggagga agcatgattg cacgttggtt
    16381 ctggcgcgaa tggcgttcgc cgtcgctatt aattgtctgg ctggcgctaa gcctggcggt
    16441 ggcctgcgtg ctggcgctgg gcaatatcag cgatcgcatg gagaagggct taagccagca
    16501 aagccgtgag tttatggcgg gcgatcgggc gttgcgcagt tcacgcgaag tgccgcaagc
    16561 gtggctggag gaagcgcaaa agcgcggcct gaaagtcggc aagcagctga ctttcgccac
    16621 aatgaccttt gcaggcgaca caccgcagct ggcgaacgtc aaagcggtgg atgatatcta
    16681 cccgatgtat ggcgatctgc aaactaatcc ccctggcctg aaaccgcagg cgggcagcgt
    16741 attgctggcc ccacgcctga tggcactgct taacctgaaa acgggcgaca ccattgacgt
    16801 gggcgatgcc accttgcgga ttgccggaga agtgattcag gaaccggatt ccggttttaa
    16861 ccccttccag atggctccgc gtctgatgat gaatctggcg gatgtcgata aaaccggagc
    16921 cgtgcagccg gggagtcggg tcacctggcg ttataaattc ggcggcaacg agaaccagct
    16981 cgacggctat gagaaatggt tgttacctca gcttaaaccc gaacaacgct ggtacggtct
    17041 ggaacaggac gaaggcgcgc tggggcgatc gatggaacgc tcgcaacagt tcctgctgct
    17101 ttcggcgctt ctgaccttgc tgctggcagt ggcagcggtg gcggtagcga tgaatcatta
    17161 ctgtcgcagt cgctacgatc tggtggcgat cctcaaaacg ctgggggcag ggcgaacgca
    17221 actgcgtaag ctaatcgtcg gtcagtggtt gatggtgctg acgctttcag ccgttaccgg
    17281 tggggccata ggcctgttgt tcgaaaacgt gttgatggtg ctgctcaagc ccgttctgcc
    17341 tgctgcacta ccgccagcca gcctctggcc gtggctgtgg gcgcttggca ccatgacggt
    17401 catctcgctg ctggtggggc tacgaccata ccgcttgttg ctggcaacgc agcctttacg
    17461 cgtattacgt aatgatgtgg tagcgaacgt ctggccgctg aagttttatc tgccgattgt
    17521 cagtatggtg gttgtgctgc tgctcgccgg attaatgggt ggcagcatgc tgctttgggc
    17581 ggtgctggcg ggcgcagtag tactggcttt gctgtgcggt gtgctgggct ggatgcagct
    17641 gaatgtactt tgccgcatga cgctgaaatc gctacctctg cgcctggcgg ttagccgcct
    17701 gttacgtcag ccgtggtcaa cgttaagcca gctttcggca ttttcgctct cctttatgct
    17761 gctggcgctg ttgctggtat tgcgttgcga tctgctcgac cgctggcagc agctaccgcc
    17821 agaaagcccg aactactttt taattaacat cgccacagaa caggtagcac cgctaaaagc
    17881 gttcctcgcg gaacatcata tagtcccgga atcattttat ccggtagtgc gggcgcggct
    17941 gacggcgatt aacgataagc cgacagaagg taatgaagat gaggcgctta atcgcgaact
    18001 caatcttacc tggcaaaata cgcggcccga tcataatccg attgtcgccg gtaactggcc
    18061 gccaaaagcc gatgaagtgt cgatggaaga ggggctggcg aaacgcttaa acgttgccct
    18121 cggtggtacc gtgactttta tgggcgatac ccaggagttc cgcgctaaag tgaccagcct
    18181 gcgcaaagtg gactgggaaa gtctgcggcc taatttctat tttattttcc cggaaggggc
    18241 attagacggg caaccgcaga gctggcttac cagtttccgc tgggagaatg gcaacggcat
    18301 gttgacgcaa ctcaaccgcc agttcccgac cattagcctg ttagatattg gcgcgatttt
    18361 aaaacaggtc ggttaggtgc tggagcaggt aagtcgggcg ctggaggtga tggtggtgct
    18421 ggtcaccgcc tgcggtatgt tgctgttgct ggcacaggtg caggtgggaa tgcgccagcg
    18481 tcatcaggag ctggtggtat ggcgcacact cggtgcgggg aaaaaactgc tgcgcacgac
    18541 attgtggtgt gagttcgcca tgcttgggtt tgtttccggc ctggtggccg caattggtgc
    18601 ggaaacggca ctggcagtgt tgcaggcgaa agtgtttgat ttcccgtggg agccagactg
    18661 gcgattgtgg attgttctgc cgtgcagcgg tgcgctgctg ctgtcgcttt tcggcggctg
    18721 gctgggtgcg cgactggtta agggtaaggc gctgttcagg cagtttgcgg ggtgatgaga
    18781 gtaaataagg ggcgttctgg ttgaatggaa cgccttgttt aaattaattc tacaatatgt
    18841 ttcattgatg atgttattga attggtgatt tcctatcttt ctattgctga tattaatctg
    18901 aattggtgga gtttaataat tttaaatata gccctacaaa aataactcag actaataaaa
    18961 tcataaatca tatgcgttga atggatatta tccatatagt gaatttgttg atgatgaatt
    19021 catctgtgct aaaaatttta gtttaataaa atattgaaag tgacctgtaa taacagttat
    19081 tgttgattga gaacaaataa gtttatgtga aaaatatata aatacattag ctggtcatgt
    19141 gtgtcatttt atttttttgt tgctaacaca gggatatgaa caataactaa aagggcactt
    19201 tatatgagcg gaaaaccagc ggcgcgtcag ggagatatga ctcagtatgg cggtcccatt
    19261 gtccagggtt cggcaggtgt aagaattggc gcgccaactg gcgtggcgtg ctcggtgtgt
    19321 ccgggcggga tgacctcggg caacccggtg aacccgctgc tcggtgcaaa agtacagccc
    19381 ggcgagacgg accttgcgct gcccgacccg ctgccgttca ttctctcccg cacctacagc
    19441 agctaccgga cgaagacgcc tgcgccagtg ggaacttttt ggccccggct ggaaagcgcc
    19501 ttctgatatc cgcttacaga tacgcgatga tgcactggta ctcaacgaca acggcgggcg
    19561 gagcattcac tttgagccgc tgctgccggg gaaggctgtg tacagccgca gtgagtcaat
    19621 gtggctggtg cgtggcggta aggcagcgca gccggacggc cacacgctgg cacgactgtg
    19681 ggcgtcgctg ccgccggata tccggttaag cccgcatctt tacctggcga ccaacagcgc
    19741 acaggggccg tggtggatac tggggtgatc tgagcgggtg ccgggtgctg aggacgtact
    19801 gccagcgccg ctgccgccgt accgggtgct taccgggatg gcggaccgct tcgggcggac
    19861 gctgacgtac cggcgtgagg ccgcaggcga cctggccggg gaaatcaccg gcgtgacgga
    19921 cggtgccggg cgggagttcc gtctggtgct gaccacacag gcgcagcagg cggaagaggc
    19981 ccggcagcag gcggtcgtcg ccggagcaaa acgaccggac attcctgatt cactgccgga
    20041 gagcacagag tacggccccg acaggggtat ccgcctttcg gcggtgtggc tgatgcacga
    20101 cccggcatac ccggagagcc tgcccggtgc gccactggcg cggtacacgt atacggaagc
    20161 cggtgaactg ctggcggtat atgaccgcag caatacgcag gtgcgcgctt tcacgtatga
    20221 cgcgcagcac ccgggccgga tggtggcgca ccgttacgcg ggaaggccgg agatgcgcta
    20281 ccgctacgac gatacggggc gggtggtgga gcaactgaac ccggcagggt taagctaccg
    20341 ctatctttat gagcaggacc gcatcaccgt caccgacagc ctgaaccggc gtgaggtgct
    20401 gcatacagaa ggcggggccg ggctgaaacg ggtggtgaaa aaagaactgg cggacggcag
    20461 cgtcacgcgc agcgggtatg acgcggcagg aaggctcacg gcgcagacgg acgcggcggg
    20521 acggcggaca gagtacggtc tgaatgtggt gtccggcgat atcacggaca tcaccacacc
    20581 ggacgggcgg gagacgaaat tttactataa cgacgggaac cagctgacgg cggtggtgta
    20641 cccggacggg ctggagagca gccgggaata tgatgaaccg ggcaggctgg tatcggagac
    20701 atcgcgcagc ggggagacag tacgctaccg ctacgatgac gcgcacagtg agttaccggc
    20761 gacgacaacg gatgcgacgg gcagcacccg gcagatgacg gcggttcacc gcgaggaagg
    20821 tatcagcctt taccgccact atgacaaccg tggccggtta acctcggtga aagacgcaca
    20881 gggccgtgaa acgcagtatg agtacaacgc cgcaggcgac ctgactgccg ttatcacccc
    20941 ggacggcaac cggagcgaga cacagtacga tgcgtgggga aaggcggtca gcaccacgca
    21001 gggcgggctg acgcgcagta tggagtacga tgctgccgga cgtgtcatca gtctgactaa
    21061 cgagaacggc agtcacagcg acttcagcta cgatgcgctg gaccggctgg tacagcaggg
    21121 cggctttgac gggcggacgc aacgttatca ttatgacctg accggaaaac tcacgcagag
    21181 tgaggatgag gggcttgtca ccctctggca ctacgatgcg tcggaccgca tcacgcaccg
    21241 gacggtgaac ggcgacccgg cagagcagtg gcagtatgac ggccacggct ggctgagaga
    21301 aatcagccac ctgagcgaag gccaccgtgt cgctgtccac tacggctacg acgataaggg
    21361 ccgcctgacg ggcgaacggc agacggtgga gaacccggag acgggggaac tgctgtggca
    21421 gcatgagacg aaacacgcct acaacgaaca ggggctggca aaccgcgtca cgccggacag
    21481 cctgccgccg gtggagtggc tgacctacgg cagcggttac ctggcgggca tgaagctggg
    21541 cgggacgccg ctggtcgagt atacgcggga caggctgcac cgtgagacgg tgcgcagctt
    21601 cggcagcatg gcaggcagta atgccgcata tgaactgacc agcacataca cccccgcagg
    21661 ccagttacag agccagcacc tgaacagcct ggtgtatgac cgtgactacg ggtggaatga
    21721 caacggcgac ctggtgcgca tcagcggtcc gcgacagacg cgggaatacg gctacagcgc
    21781 cacgggcagg ctggagagcg tgcgcaccct cgcaccggac ctggacatcc gcatcccgta
    21841 tgcgaccgac ccggcgggaa accggctgcc ggacccggag ctacacccgg acagcacgct
    21901 cacggcgtgg ccggataacc gcatcgcaga ggatgcgcac tatgtttacc actatgatga
    21961 atacggcaga ctgacggaga agacggaccg catcccggcg ggtgtgatac ggacggacga
    22021 cgagcggacc caccactacc actacgacag ccagcaccgc ctggtgttcc acacgcggat
    22081 acagcatggc gagccactgg tcgagagccg ctacctctac gacccgctga gccgccggac
    22141 ggggaaacgg gtgtggcgtc gcgagcgtga cctgacgggg tggatgtcgc tgtcgcgtaa
    22201 accggaggtg acgtggtacg gatgggacgg cgaccggctg acgacggtac agaccgacac
    22261 cacgcgtatc cagacggtat accagccggg gagcttcgcg ccgctcatcc gcatcgaaac
    22321 agacaacggt gaacgggaga aagcgcagtg ccgcagcctg gcggagaagt tacagcagga
    22381 agggagcgaa gacggtcacg gtgtggtgtt cccggctgaa ctggtggggc tgctggacag
    22441 gctggagggg gaaatccggg caaactgcgt gagcagtgaa agccgccagt ggcttgcgca
    22501 gtgcgggctg acggtggagc ggctggcggc acagatagag ccggtttatt tgcctgagcg
    22561 aaaaatacat ctttatcact gtgaccaccg gggcctgccg ctggcgctta tcagtgaaga
    22621 cggcaatacg gcgtggagcg cggaatatga tgaatggggc aaccagctta atgaggagaa
    22681 cccgcatcac ctgcaccagc cgtaccggct gccggggcag cagtatgata aggagtcggg
    22741 gctgtactac aaccggaacc ggtactacga tccgttgcag gggcggtata tcactcagga
    22801 cccgataggg ctggaggggg gatggagtct gtatgcgtat ccgctgaatc cggtgaatgg
    22861 tattgatcca ttagggttaa gtcccgcaga tgtagcgcta ataagaagaa aagatcaact
    22921 aaaccatcaa a
//
LOCUS       DADKRT010000052        22864 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.052, whole genome shotgun sequence.
ACCESSION   DADKRT010000052 DADKRT010000000
VERSION     DADKRT010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22864
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.052"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            39..968
                     /gene="aaeR"
                     /locus_tag="JQ356_001729"
     CDS             39..968
                     /gene="aaeR"
                     /locus_tag="JQ356_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HAY4621853.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL
                     QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
                     MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF
                     VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK"
     gene            complement(1096..2541)
                     /gene="tldD"
                     /locus_tag="JQ356_001730"
     CDS             complement(1096..2541)
                     /gene="tldD"
                     /locus_tag="JQ356_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HAY4621854.1"
                     /translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
                     SGDGKVQTLGAVGHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS
                     GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD
                     GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
                     DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTKPVRGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
     gene            complement(2697..6497)
                     /locus_tag="JQ356_001731"
     CDS             complement(2697..6497)
                     /locus_tag="JQ356_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709041.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein"
                     /protein_id="HAY4621855.1"
                     /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI
                     ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLRFRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
                     QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ
                     ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
                     HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
                     DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
                     FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD
                     GQATISWLNNDKGFHLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
                     QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
                     NAKFAFQPDWPALTNLDIELDFINDGLWMKTDDVNLGGVRASNLTAVIPDYSKEKLLI
                     DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
                     TLRNNSLFIKLLDSTLKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
                     VAVNLNGNWQPAKTGVLPAAVNEALSGSVAWDGKVGIDLPYHAGATYNVELNGDLNNV
                     SSHLPSPLAKPAGEPLPVNVKVDGNLSSFELTGQAGADNHFNSRWLLGQKLTLDRAIW
                     AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS
                     LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
                     GDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDLTISGDTLTLTNGLI
                     DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
                     WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
                     GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
                     EKAQ"
     gene            complement(6565..8034)
                     /gene="rng"
                     /locus_tag="JQ356_001732"
     CDS             complement(6565..8034)
                     /gene="rng"
                     /locus_tag="JQ356_001732"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HAY4621856.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
                     VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
                     TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
     gene            complement(8024..8617)
                     /gene="yhdE"
                     /locus_tag="JQ356_001733"
     CDS             complement(8024..8617)
                     /gene="yhdE"
                     /locus_tag="JQ356_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase YhdE"
                     /protein_id="HAY4621857.1"
                     /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
                     VVRLAHKKAQAGVAQTAQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
                     VMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
                     RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
     gene            complement(8626..9114)
                     /gene="mreD"
                     /locus_tag="JQ356_001734"
     CDS             complement(8626..9114)
                     /gene="mreD"
                     /locus_tag="JQ356_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HAY4621858.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ
                     QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
                     VQ"
     gene            complement(9114..10199)
                     /gene="mreC"
                     /locus_tag="JQ356_001735"
     CDS             complement(9114..10199)
                     /gene="mreC"
                     /locus_tag="JQ356_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HAY4621859.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
                     AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
                     RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPTTGIAQPTPQQPTTGNAATA
                     PAANRSPQRATPPQSGAQPPARAPGGQ"
     gene            complement(10265..11308)
                     /locus_tag="JQ356_001736"
     CDS             complement(10265..11308)
                     /locus_tag="JQ356_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HAY4621860.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNN
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
                     SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
                     KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
                     QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
                     MIDMHGGDLFSEE"
     gene            complement(11613..13553)
                     /gene="csrD"
                     /locus_tag="JQ356_001737"
     CDS             complement(11613..13553)
                     /gene="csrD"
                     /locus_tag="JQ356_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
                     /protein_id="HAY4621861.1"
                     /translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA
                     VATAIDTHLVSNDFSTLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSD
                     LFRELSVPLIKYPGMSLRLVYQDPMGNYFHSLMTTAPLTGAISFIIVMLFLAVRWLQR
                     QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT
                     LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS
                     QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT
                     LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK
                     GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
                     VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS
                     QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL
                     KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG
                     DFFASSQPLDTNVKKYSQRYSV"
     gene            13705..14679
                     /locus_tag="JQ356_001738"
     CDS             13705..14679
                     /locus_tag="JQ356_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY4621862.1"
                     /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVMVDVHWSSLNYKDA
                     LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
                     RVKGDWLVAMPQGLDARKAIIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
                     STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDT
                     VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
                     QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
     gene            15657..16127
                     /gene="accB"
                     /locus_tag="JQ356_001739"
                     /gene_synonym="fabE"
     CDS             15657..16127
                     /gene="accB"
                     /locus_tag="JQ356_001739"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HAY4621863.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
                     QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
     gene            16138..17487
                     /gene="accC"
                     /locus_tag="JQ356_001740"
     CDS             16138..17487
                     /gene="accC"
                     /locus_tag="JQ356_001740"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HAY4621864.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
                     SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
     gene            complement(17579..18626)
                     /locus_tag="JQ356_001741"
                     /pseudo
     CDS             complement(17579..18626)
                     /locus_tag="JQ356_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000787050.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
     gene            complement(18623..19585)
                     /locus_tag="JQ356_001742"
     CDS             complement(18623..19585)
                     /locus_tag="JQ356_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY4621865.1"
                     /translation="MSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQ
                     VTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDR
                     DFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG
                     VISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEE
                     GVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDVHR
                     ALQYANACGALAVTRRGPMEGTSRLAEIEAFIQRHDMSIREAAQ"
     gene            complement(19607..20596)
                     /locus_tag="JQ356_001743"
                     /pseudo
     CDS             complement(19607..20596)
                     /locus_tag="JQ356_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525780.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(20597..22096)
                     /locus_tag="JQ356_001744"
     CDS             complement(20597..22096)
                     /locus_tag="JQ356_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY4621866.1"
                     /translation="MTDVILDVSHIAKTFGHVQALKDITLSLRKGRVHTLLGENGAGK
                     STLMKILAGVYPPTQGTITLRGETITINNPQHSRQLGIAIIFQELSLSNNMTVAENIY
                     ANNEPRRFGIINDKKMLADCQNLLAERGIPLDPLEMVGNMSMAHRQLVEIAKALSYAA
                     DVVIMDEPTSSLSDNEAEILFNIIEKLKQRGCAVIYISHRMDEIMRISDDISVIRDGE
                     YIATHEKKNSDIQHLIAQMVGREMKNIWPARLGEIPDENVPAKLEVKNLSHPSLFKEI
                     SFAVRPGEVLGFFGLVGAGRSDVMKALFGLVSYQGTVLIDGKEVRITNPKQAIDHGIA
                     FVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSS
                     VHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGT
                     AIILVSSELPEVMALSDRLVVMRNKTIADIYSCENLTQTQVMTAATGVR"
     gene            complement(22157..>22864)
                     /locus_tag="JQ356_001745"
     CDS             complement(22157..>22864)
                     /locus_tag="JQ356_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HAY4621867.1"
                     /translation="LFANQDLNKQLSDVEDFITKKVDAIIISPVDSKGVQAAIIKADK
                     AGIPVITVDVAAEGVPVVSHVATDNYAGGVEAGKLMGKLLNGKGTVAIISYPALQSVV
                     ARVDGFKKGLSDTPDIKIVAEQPSITRAEALTTAQNIMQANANLNGLFGFGDDAALAA
                     VIAAKSAHNDNIKIIGFDGMKEARDAVDSEKTFAAVIRQYPDQMGAKAIDAAVDHLNG
                     KPVEKMIPVQPGVYTGK"
BASE COUNT         5669 a         6192 c         5460 g         5543 t
ORIGIN      
        1 attatgtgat ctaaatcact tttaagtcag agtgaataat ggaacgacta aaacgcatgt
       61 cggtgtttgc caaagtagtt gaatttggct cttttaccgc cgccgccaga cagctacaga
      121 tgagcgtttc gtccatcagt cagacggtgt caaaactgga agatgagttg caggtaaagc
      181 tgttaaaccg tagcacacgc agcattggcc tgaccgaagc cggtagaatt tactaccagg
      241 gctgccgtcg tatgcttcat gaagtgcagg atgttcatga gcaactgtat gctttcaata
      301 acacccccat cgggacgcta cgcattggct gttcttcaac tatggcacaa aatgttctcg
      361 ccgggctgac agccaaaatg ctgaaagaat acccaggttt gagcgtcaat ctggttaccg
      421 gaattccagc ccccgacctg attgccgacg gtctggatgt ggtgatccgc gtcggcgcgt
      481 tgcaggattc cagcctgttt tcccgccgtc ttggcgcgat gccaatggtg gtgtgcgccg
      541 cgaaaagcta tctcacacaa tacggcatac cggaaaaacc cgccgattta agtagccatt
      601 catggcttga atacagcgtg cggcccgaca atgaatttga actgattgca ccggaaggga
      661 tctcgactcg cctgatcccg caagggagat ttgtgactaa tgatccgatg acgctggtgc
      721 gctggctaac ggcgggtgcc gggatcgcct acgtgccgct gatgtgggtg atcaacgaga
      781 tcaatcgtgg ggagctggag atcctgctgc cgcgttatca gtcagatcca cgcccggttt
      841 atgcgttata taccgaaaaa gataagctgc cgctgaaggt acaggtcgtg atcaactcgc
      901 tgacggatta ttttgttgag gtcggtaaat tgtttcagga gatgcacggg cgcgggaaag
      961 agaagtaatt catattgtac tgttacgttc tacaaacctg tgccaacggg ttcccctcac
     1021 cctaacccca gaggagcgag gggaccgttc gtgcacgtag aaagattaat tatccttctg
     1081 aaaataatga aattattacg cagtaccgcc aacagtcagg ttatcaactt tcagcgttgg
     1141 ctggcccacg ccaaccggca aactttgccc ttctttaccg cagacaccca cgccgttatc
     1201 cagtttcagg tcgttgccaa ccatcgaaat ctgctgcatg gtttcgatac cggaaccaat
     1261 caacgttgcg cctctcaccg gcttcgttac tttaccgttt tcaatcagat atgcttctga
     1321 agtggagaaa acgaatttgc cggaggtgat atccacctga ccgccaccaa agttcggtgc
     1381 atagataccg tactcaacgg attcaataat ttcctgcggg gtcgatttac ccggcagcat
     1441 ataggtgttg gtcatacgcg gcatgggcag atgggcgtag gattcacggc gaccgttgcc
     1501 agtcggcgtc atccccatca aacgcgcgtt gagtttatcc tgcatgtagc ctttcagaat
     1561 gccgttctca atcagcacgt tgtactggcc tggcgtacct tcgtcatcaa tcgccaccga
     1621 accacggcga tcgaccatcg tgccgtcatc aaccacggta cacagttctg aagccaccag
     1681 ctccccgacc tgcccactaa atactgaagt gccgcggcgg ttgaagtcgc cttccagacc
     1741 gtgacctacc gcttcatgca acagcacgcc cggccaacct gcgccaagta ctaccggcat
     1801 ggtgcccgct ggtgcagcaa cggcagaaag attgaccagc gccatacgca ctgcttcttt
     1861 tgcccatgca tccgcacgga cttcgccgtc aagatcggca aggaagaact cataaccaaa
     1921 acgaccgcca ccgccactgg caccgcgttc gcgtttgcca tcttcttcga ccagaacgct
     1981 cacggaaaga cgcaccagcg gacggacatc cgccgctagc gtgccgtcgg tggccgcaac
     2041 cagaattaat tcatagacac cactgaggct ggcagtcact tcctgtacgc gcttgtccgc
     2101 ttcgcgagca accttatcga cgcgacgcag gatatccagc ttctcttcac ggctcatgct
     2161 ttgcagcgga tctaccgagg tatacaacgg gctatgccct accgcgccca gcgtctgtac
     2221 tttgccatca ccactatcac ggacgatggt gcgcgccgct tgcgcactct gttccagcgc
     2281 cagcaggctg atttggtcag cgtaagcaaa tccggttttt tcaccgctga ttgcacgcac
     2341 gccaacgccc tgatcgatgt tgtaagaacc atctttaata atgcggtctt ctaaaaccca
     2401 ggattcgtga tagctcgact gaaaatagag atcgccataa tcaaggcgac gttcggccag
     2461 ttgaccgagg atcgcgaaca agtcctgatg tttcaggccg ttcgccgcta gcaattgttc
     2521 acttactagg ttaagactca tcgtttttgc tactcgttag ttactgcagt agaggatttt
     2581 ttacggctgc cggatgcggc gtgaacgccc tatccgacct acggttatgt tctggctcgt
     2641 tggcctttgg caacgattat catatgagat tggggcaatt acgcgccctc gtcaaatcat
     2701 tgcgcttttt ctttacgcgg ttggcgcaac acttcgttga tttgcggatc gtccagcgga
     2761 cccgaaatgt gatagcgcaa aatggagact ttgctccaca gcggccccag cactttactg
     2821 gctgcaaata ctgccgcgcc aacaatgggg ttaaccgcaa aagccgcagc cacgcccacc
     2881 gtcgcagaaa tctctggtgc gacaaccgct tccatattca ggtcgcgacg taccagattt
     2941 accgaccctt tcatggcgat atccgcctcc aggccatcca ccagcgtgtc gtcggtgtgc
     3001 ataacgccgt ctttaatcca cgcggtgctg cgaatggagt caaaatagaa cccttcgcca
     3061 aaagtgtctc tgaaatcaaa acgcagctta cgcatcaggg catcaacgct caataagcgc
     3121 agcaattgcc cggcatgtcc ggtattgatt tcggtaattt cgcctttacc cagttgagta
     3181 tgaatgatgc cattcaacgt cgcctcatct ggttgccagg gtgctttgcg ccagtgtaaa
     3241 tcgtaatcca cattaaatga cgactggcgt atgggcgtcg tgacaccaaa aaattctgcg
     3301 gcggcatcaa ttttctgccc gcgcagtttt cctttcagcg aggtacgttc attccccgga
     3361 ttattaaccc attcaccatc ggcagtaagc cgcgagaaac cagtatcaat cagtccattg
     3421 gtcagcgtta acgtatcgcc agaaatggtg agatcactgt caatacgacc gaatttttgc
     3481 ccccagaacc agcactctgt gcatcgtatt tgtgcgtccg gccagccacg gaagttaatg
     3541 cgctccgttg tcgggaaagg tgatgacggt gttgaatcac cacgagtttt cgccacgctc
     3601 gggttgtaat aaagatattt gatattcgcc agccacggcg cgttattacg catcgccagc
     3661 gtggcattga tttcacgccc ctgcgcctca accagggtgc catttgccgt cggttgcgaa
     3721 acaatactca ggttattcca ttgctgattt cccagtgaca acataggcgt acgtaacgtt
     3781 atgtgttgtg ggaaactcgc tgcaccaccg acactctccg cagcgccttt ctggaacagg
     3841 gccagccact cggcaccatt catcggcggc atattgagtt caacgccact ttgttccggc
     3901 aacggcggga gcgttttact gtctgccgcc caaatagcac gatcgagcgt cagcttttga
     3961 ccaagcaacc agcggctatt gaaatggtta tccgcaccag cctgtccggt taattcaaag
     4021 ctgctgagat tgccatcaac cttaacgttt accggcagtg gttcacccgc aggtttggct
     4081 aacggtgaag gtaagtgact gctcacatta ttcagatcgc cgttcagctc tacgttatag
     4141 gtcgcgccag catgataagg cagatcaatg cccactttac catcccacgc cacgctgcca
     4201 ctcaatgctt cgttcaccgc tgcaggcaga acgccggttt tcgccggttg ccagttaccg
     4261 ttgaggttta ccgcaacctg gtaggctttt gccccttctt tggtggaaaa atccacgttc
     4321 aacggctgat taaaccagct tgctgtcagt ggttcacttt gcagatcgcc attgataaag
     4381 ctgaatttac cgctcaaatt tttcagggtg ctgtcgagta gtttgataaa cagactgtta
     4441 ttacgcagcg tcacttcacc tttcgcggtt accagttcgc cgttcagcgg gatatcaaga
     4501 tgtaagcgag cattcacatc gccgtcgagc tggagttctt gcagggtcgc acccagagaa
     4561 tctttcagcg gtgtctcatc aaagtaaggg ccaacggctt tacccggacc tttaatgtca
     4621 gcgtcaatca gcagtttttc tttcgagtag tcagggatca ctgcggtgag attactcgcg
     4681 cgcacgccgc ccagattaac gtcatcggtt ttcatccata aaccgtcgtt aataaagtcc
     4741 agttcaatat caaggttagt taatgcaggc cagtccggct ggaaggcaaa cttcgcgtta
     4801 cgcagcggca ccagcacttc aaactgacct tcgttgtgtt tataggggaa gagttgcgga
     4861 ttgccaccat aaaccagcgt cgcgttatcc gcttcaccgc cctgaatcgc gccacttaag
     4921 taatcaacta ggtctttacc catcaagttt tccgggaaat agcgccaggc ttgtgaacca
     4981 tcatcggtac tgatgccagc cagaataccc agccagggtt catcgttagc aggttgcagg
     5041 taacgaaaac cgccgcgcgc atggacagct ttggctttaa cgtcaatatt acgcccatcc
     5101 aggtggaaac ctttgtcatt gttcagccag cttatagttg cctggccgtc ggcgatttcc
     5161 agtggcgcac ggaataccgt ttcgtaaggc atctttgcct gcttcatcga cgcggtaagc
     5221 aaaccatttt caacgctgcc ggaaagcgtc ccggagaagt gttccgcacc cggtaataat
     5281 ttccattgct tccaggccag atcgctccac gatgcctgaa aacgggtctt gtctgccgcc
     5341 tgaagcggga tatccagcgc cagagtgtta atcttgccgc tcggttgtgt ggagcgccaa
     5401 acatcaccca gtgcaggtga aagtttcgcg gccagcgggc gtatgccctc caggcctgcc
     5461 agctccagat tactggcgcg aatccggagt tcgtcactgc gtttattgtc tttgccgcca
     5521 acgtcctgtt ccggtatcca ggccagcgtc aatgctccgc tcggccaggg tttgccgtcc
     5581 atcgtgatcc gtgtatcggg aatagagaac tgccagcccg gattttcacg cgtaatatgc
     5641 gcggtcagat tatccaccga cagcgtatgc gtttgcttct cgcccaacca gctggcaccg
     5701 ccctgtttca gccagacgtc accgccggtt acatcgcctt tgtcgatcgt catccagcct
     5761 tcaagggaga actgtgccgt ttccagagca atattgtcct gcatccattt accgagccac
     5821 ggcttcaggt cgatgtcatc cgcctgtagc cagacgcgac cattgcttaa caacccctca
     5881 tcatcgcgca aatccatgcg cacctgcatc acgccgtgct gtccggtaag gctggagagg
     5941 cttaccaggc cttccgcacg gtgtcgacgt ggatcgttca gccaggtgag ttgtgggatc
     6001 gccagctcgg cgcgctgacc ggatggcgtc agaaaactga cttcactgtc gcggagatcg
     6061 aaatggtcaa attgacgaag aaacagatcg ctgatgtgac tggcttccag gctatcatta
     6121 ccaccaccgc tggtgatagg agtgttggtg cgaaagcgca gctgccagaa agtgaggtcg
     6181 cgaaactgcc agcgcatatg taacaagctc tgccagacat ccagcgccag agtaacgcgt
     6241 ttaaccgaaa attcgccgcc atcttttagt tctgcacgga tgtcgtgtgc ttcaagcgtc
     6301 gggccaaaat tctgccagct ggctgagagc tgactggctt ctaccggcat gccagtcgcg
     6361 gattctattt tgttgaggat ttccggacgc caggcgtcaa gatgcggtaa agcaatacgc
     6421 aggccgctaa ccagcagggc tgcgatcaca acgagcgcgg ctccagtaag cagtaaaatc
     6481 cccggcaatc gcctcacccg tcactccttg tctgctaaaa atgtgactca aaaacccttt
     6541 gccggatggc ggcccagcat ctgtttacat cattacgacg tcaaactgct cctggttata
     6601 gagcggttca atttgtactt taacctgttt gccaacgaaa atttccactt ccgccagcga
     6661 gtgtgactct tcgcctttca aggcttcagc tactgccgga gaagcataga ccaggaaacg
     6721 gtcggagtcg taagcatggt ggacacgaac aatctcgcgc atgatttcat agcataccgt
     6781 ttccacggtt ttcaccgttc cgcgaccgtg gcaggttggg cattcgttac acagtacgtg
     6841 ctcaatgctt tcgcgggtgc gtttacgcgt catctccacc agccccagcg ccgaaaaacc
     6901 attaacgctg gttttcaccc ggtctttgct caacgcctgc tccagcgagt gcagcacgcg
     6961 gcggcggtga tcttcattat tcatatcgat gaaatcaata atgataatcc cacccagatt
     7021 acgcaaccgt aactggcgag cgatagcctg cgtcgcttca atattggtat tgaaaatggt
     7081 gtcgtccaga ttgcgatgac cgacaaacgc tccggtattg atgtccacgg tggtcatcgc
     7141 ttcggtctgg tcgataatca gataaccacc ggatttcagt tctactttgc gttccagcgc
     7201 tcgctggatt tcgttttcga catcaaagag atcgaaaatc ggctggcgtc cggtgtaatg
     7261 ctccagcttg ctggtcatct cgggaatgta ctccgaggta aactccagca atgcttcgta
     7321 agtcaggcgt gagtcaacgc gaatgcggtc cagttcggcg tcggcgaaat cacgcagaac
     7381 acgctgcgcc agcgccagtt cgccgtacag ctgataacgg gtctgcgggc gttttttacg
     7441 ctccataact ttggtccaga cgcgtttcag ataagcggca tcggaggcca gttcagcctc
     7501 gccaacccct tccgctgcgg tacggatgat aaacccgccc tgctcgtcgc aatactctgc
     7561 gaccactttt ttcaggcgtt cacgttctga ttcgctttca atacgttggg aaaccccaac
     7621 gtgagaagcc cctggcataa acaccagata gcgagaaggc agcgtgatat cggtggtcag
     7681 gcgcgcacct ttagtgccaa gcggatcttt caccacctgc accatcagat cttgcccctg
     7741 acgaaccagt tccgagatgt cgcgcaccgt gaattgcttt tgttcttcac ccgccacaca
     7801 ttcggtgtgc ggcatgatat cggatgcatg aagaaacgcg gctttatcca gcccaatatc
     7861 tacaaaagcc gcctgcatac ccggaagtac acgacttaca cgacccttgt agatattgcc
     7921 tactattccg cgtcgcgcct cacgttcaat atgaatttcc tgcagaatac cgccatcaat
     7981 atacgccact cgcgtttccg aaggcgttac gtttactaac aattcagccg tcatgtttat
     8041 cccttttctc acgcagtgcg ttaaaattac ttaataattc atacgtttca accagcggta
     8101 agccgactac ggcgtgatag ctgccattta tcttcctgac aaaacagcca cccagcccct
     8161 gaataccgta tgcacctgct ttatctaacg gttcaccgct ggcgacatag cccgcgatgt
     8221 cttcgtctgt taacgttctg aaagtcacat cggtgaccac caggcaatcg agaatgtgct
     8281 ggctgtcggc caacaccact gccgtcatca cctgatgggt ctgacccgat aatttgcgca
     8341 acatctgcgc cgcatgctct gcgtcgcgcg gtttctccag cacttctcca ttcaggataa
     8401 cgatagtatc cgcacccagc accgggagat cctgcgccgt ttgcgcgaca cccgcctgtg
     8461 ctttcttgtg tgccagacgc acaacatact gctgcgcgct ctcctgcggc tgacgctgct
     8521 cctcaatgcc cgtaacaata cgttcaaagg tcacgccaag ttgcgcaagt aactcctgac
     8581 gacgcggaga accggaagct aaatacagag aagtcataga aacctttatt gcactgcaaa
     8641 ctgctgacgg actttacgca tcagcaagaa aatccacggc cagagcaccc cattgactac
     8701 actactccag aacacttccg gtctgaaaga gacgttaatc actaaaaact ctgcccagaa
     8761 aacaataata tccaccacca gcgaaagcaa catgacgact agcgcctgct gccataatgc
     8821 gaggttgcgg aaaagctggt atttcagcgc caccaggtaa gcaatgatgc tcatcgccaa
     8881 tacgcgtacg ccaagcgtcg agccgctgat cagatccagt atggcaccca tcacaaaacc
     8941 tgtgcccaca tttacgcgat ggggcaaggc caggatccaa tacaacaaga taagtaacac
     9001 ccagtttggc cggaaaacaa tcaggttatc cggccagggc atgatttgca gcaacagcgc
     9061 aatgaggaaa gagagccaga ttacccaacg tccctggcta cgatagctcg ccactattgc
     9121 cctcccggcg cacgcgcagg cggttgagca ccactttgcg gcggcgtagc cctttgtgga
     9181 gagcgattag cagcaggcgc agtagctgca tttcctgtcg tcggttgctg cggagtcggc
     9241 tgagcgatcc ccgttgtcgg ttcaggtaac tttggcccca tcgcgtctgg cgaaggcaat
     9301 acctgcggca tcatctgcat cagacgttca ttagcaacac gatgcacctc ttccggcgtc
     9361 atcgggttag cgccgttacg atccgcgccc cacagcagca gcagataacg caaacgttgc
     9421 agtcctgcag tcggacgcgc ctgaatcaca gtataagcgc gctgggtatc gagttttacg
     9481 gaagagacaa ccgcgaccgg atagccttcc gggaaacgac cgcccagacc ggaggtcacc
     9541 agcacatcac caacacgaat atccgtattc gctggcagat gctcaagctg caaatcatct
     9601 gtacaaccgt taccggctgc aattacgcgg atatcgttgc gcagcacctg gattggcagc
     9661 gcgtgggtcg catcacaaat cagcagcacg cgactggtca gtttagcgac ggccaccacc
     9721 tgaccaacaa cacctttgtc gctgatgacc ggctggcctt cataaacgcc attaacgcta
     9781 cctttatcga taacaacttg atcgctataa ggatcgttaa ccgtggagat aacctgagtc
     9841 accattttct gctcatcctg acgcagcggg gaacccagca gctcgcgcag acgcgcgttc
     9901 tcctgtttgt attgtccaag catcagcagt tcactgtttt tcagcaacag ttcctgacgt
     9961 aacgcccggt tttcaagttc tagttggtca cgcgaggcca gcgtctgcga tacgccatcc
    10021 agcaattcac gaggagcatt ggaaacaaag tagaaaggac tgacggcggt atccatataa
    10081 gtacggattt gactgaacgt ccccaggcgg ctgtcggcaa taataatgcc gagcgccacc
    10141 agcaccgcca gaataaggcg aatctgtagc gacgggccac ggctaaaaat tggcttcata
    10201 agttatgcgt attctcgtat cagactaggc agggtaaaca gacatttccc ctgcctgcat
    10261 ccgattactc ttcgctgaac aggtcgccgc cgtgcatgtc gatcatttcc agcgctttgc
    10321 cgccaccgcg cgccacacag gtcagcgggt cttcagcaac aacgactgga atgccggttt
    10381 cttccattaa caaacggtca aggttacgca gcagtgcgcc accaccggtg agcaccatgc
    10441 cgcgctcgga gatgtcggaa gccagttccg gcgggcactg ttccagtgca accattaccg
    10501 cgctcacaat accggtcagc ggttcctgca gtgcttcgag gatttcgttg gagttcaggg
    10561 taaaaccgcg tggaacacct tctgccaggt tacggccacg aacttcgatt tcacggactt
    10621 catcgcccgg gtaagccgaa ccgatttcgt gcttgatacg ttctgcggtg gcttcaccga
    10681 tcagagaacc gtaattacga cgcacatagt tgatgatagc ttcgtcgaaa cgatcaccac
    10741 caatgcgcac ggaagaggag taaaccacgc cgttcaagga gataacagca acttcagtgg
    10801 taccaccacc gatatcaacc accatagaac cggtcgcttc agaaaccggc aggccagcac
    10861 caattgcggc agccatcggt tcttcaatca ggaagacttc acgggcacca gcgccctgcg
    10921 cggattcacg aattgcgcgg cgttcaacct gggtcgcgcc aaccggtaca caaaccagaa
    10981 cgcgcgggct tggacgcata aagttgttgc tgtgcacttg tttgatgaag tgctggagca
    11041 ttttttcagt cacgaagaag tcggcgataa cgccgtcttt cattgggcga atggcagcaa
    11101 tattgcccgg cgtacggccc agcatctgct tcgcgtcatg acctactgca gctacgcttt
    11161 tcggtgaacc ggcacgatcc tgacgaatgg ccaccacgga aggctcattc aatacgatgc
    11221 cttgtccttt tacataaatg agggtattcg cagtacccag gtcaatggac aagtcattgg
    11281 aaaacatgcc acgaaatttt ttcaacatac taagggataa tcctgaaagc tggggcggaa
    11341 aagaaaatcc gcttacttta ccaaccacac gcagcagcga caaggcgcaa aaatcatctg
    11401 ctacggtgaa aattagtgca gttcgtttcc tttgttacaa atctctgcct gagtccagaa
    11461 aggcttaatg catcagcagc attcctcgcc tgtttgcaac cgcgtaaggt cattcatctg
    11521 catatgtgct gcaacaatct ggcgagcaga caagcacact cccatgagac gcagcgcgcg
    11581 ttattctacg tgaaaacgga ttaaacggca ggttaaaccg agtatctttg tgaatatttt
    11641 ttcacgttag tatcaagtgg ctgtgaggac gcgaaaaaat ccccttgccc gcctgtaaca
    11701 ccgcgctgaa tcagggtctg ccactcgctt cgcgaacgca caccggtggc gtaaacctgg
    11761 gtgctggtcc cggagcaggc ttccaccagg ctttgaacca gcagctggtt ctccgttcgc
    11821 ttctcaatgt ttctgaccag ccccggatgg agcttgagta actcaacatt aagttctttg
    11881 atccaactgg tgcttaccag cgtcaaacca gcctggttga cggctacccg tacccctaaa
    11941 gcattcacta aacgaataac aggttgtaaa cgactgatat gttgacctac atcggcctct
    12001 gcaagttcaa taattatgcg ttttcgttgt gatttttcac attgcattaa cgtatcgcgc
    12061 agccaacgct gaaaacgcgg gcgaatcagc gactcaacgg taacctgaat cgccagattt
    12121 tcctctggcc agtaacgcaa tagtggaata agacggctga tttgcagacg gtcatactct
    12181 tccgataagc caaactgcaa gaccatcggc atatactccg ccgagctaac ctcttcatta
    12241 ccatcgaaga tgcggcacat gagttcgcga tgatgaacct gaccttcgcg agtaaccgcc
    12301 ggtttttgat aaaggcgcgg gccgccgcga ctgagcattt gctcgataag cgtacgccag
    12361 cgaacattac cgcgtccttt ttcaggcaac gagtcatcgt aaatagccca gctattgccg
    12421 ccctgcaatc ccgcattacg cgtggcagac tctgcatgtt ccattacctg ctcggtatcc
    12481 tgaccactac gccaggcgca gataccaatg tggatcatat cgtcgcgatc gagcatttta
    12541 ttgttcggca aggtatcgac ggctttgatt aactgaccgg cgatgctctc tgcctctttt
    12601 aacgtccggt gcggtaacag cgcagcaaaa tcactgcggt ggtaacgcgc cagcagtgcg
    12661 ccagggtagc gcatcataaa tgtcgacagc agattcgtca gagtgaagaa ctgttcttca
    12721 acctggctgt gcccccaagt atcgctcaac atattgaaat ccggcagacg aatcatcatc
    12781 acgatcccgt gggtacctac tttctcctga tcttccagta acgttgctaa ctgattatcg
    12841 aaaaagagtc ggttattgag gccggttttc acgtcctggg cggcataaga gcggatcagc
    12901 gtatcaagac ggctgtgttg ttcgcgtgcg ttctgaattt cacgaagcag cgtatccagc
    12961 gcactgctgg ttctgggcgg ccattcatag atggttccca acacattaga gccacgctca
    13021 ccgtttaaga tacgagtagc ccgggtttcc agcaattctt gcccggcaag ttgccgttgt
    13081 aaccagcgta ccgccaagaa gagcataaca atgataaagc taatcgcccc cgtgagcggc
    13141 gcggtggtca tcaacgaatg gaaatagttg cccatcggat cctgataaac cagacgcagc
    13201 gacatccccg gatactttat caacggaacg ctcagttcac gaaacagatc gctggagcca
    13261 accggacgat aactaccatt tctggccagg gtataaacct gtttatcacc atggagcagg
    13321 tctacacgaa cgatatctgc cgacatcatt aattcggtaa tttgtggcct taatgtgctg
    13381 aagtcattcg acacaaggtg ggtatcaatc gccgtcgcca ccgcctgaac gcgatgacta
    13441 aacttatact gaattgcgtt gtagaaactt agcgaacagc ccagcaaagt cacaaaaatt
    13501 gttaacccgg tgagcagcgt aacaaaggcc gaaaatttcg tcgttaatct catccttgtg
    13561 ttaactccga tagtgaggaa gcgggcatac tagcaaatca gatttatctc gcaatttatt
    13621 gcgcttcatc ggctttgctt ttccattagc gagtataatc ttcagaaatt attttccaat
    13681 ccatcatgca catgaggacc acttatgcag gcgttacttt tagaacagca ggacggcaaa
    13741 actctcgcat cagtacagac tctggacgaa agtcgcctgc cggagggcga tgtcatggtc
    13801 gatgttcact ggtcgagcct gaactataaa gatgcgctgg cgattaccgg taagggaaaa
    13861 atcatccgta attttccgat gattcctggg atcgattttg ccggaactgt acgcaccagc
    13921 gaagatccgc gttttcatgc cggtcaggag gtgttactca ctggctgggg cgttggtgaa
    13981 aaccactggg gtgggctggc ggagcaggcg cgagtgaaag gtgactggct ggttgccatg
    14041 ccgcaagggc tggacgcgcg taaagcaata attatcggta ctgccggttt taccgccatg
    14101 ctgtgtgtga tggcgctgga agatgccggt gttcgcccgc aggacgggga gattgtcgtg
    14161 acgggtgcca gtggtggcgt cggcagtacc gccgtggcgc tgctgcataa gttgggttat
    14221 caggtcgttg ccgtttccgg tcgcgaaagt acccatgaat atctgaaaag tttaggtgcc
    14281 agccgtattc tccctcgtga tgagtttgcc gaatcccgtc ctctggaaaa acaagtctgg
    14341 gctggggcaa ttgacactgt tggcgacaaa gtgctggcaa aagtgctggc gcaaatgaat
    14401 tacggcggct gcgtggcggc ctgtggtctg gcgggtggtt ttactctgcc aaccacggtc
    14461 atgccattta ttctgcgtaa tgtccgtttg caaggggtgg attcagtaat gacgccacca
    14521 gaacgccgcg cacaagcctg gcagcgactg gtcgccgatt taccggaatc attctatacc
    14581 caggcggcaa aagagatatc tctgtcagag gcaccgaact ttgccgaggc catcattaat
    14641 aaccagatcc agggtcgcac gctggtgaag gttaactaac catttagcaa ggaataataa
    14701 gagagggaac tcattttgac atcattattc aatcggttaa cgggaaaagc ggttagccgg
    14761 acagctttcg tcgaacacct tggtcaggaa gttgtacaac atcatccaaa ctggaaagtc
    14821 atgatttcga ctgaccacaa attgatgcgc attgatactc ctctaaacag ccattattga
    14881 tacgcctccg tcgcctgtta ggtttatggt gctttgcctg ggcgacacta cgcttaacct
    14941 gttactgatt tctggtacca tggggtgaat aatctgattt tatttgactg caaattaacc
    15001 actcgaacct atttaatgct gagaattgtc agtcggttga ttttgcgtgc tttagcattc
    15061 acatctatcc agacgatgca gtgaaaattg ggtaatcccc agcaaccgct gcgtaatgtc
    15121 gtctatcttg tcgcgatcct ggcatcccta cattatttgt ggtctgtgaa gattatctca
    15181 ttgcagcccc tcatcttcgc agggctggct ttacagcttt tcaccttacg ttataagaag
    15241 ttccgtcgat gatggcgcta atttcgtgaa ttgtgcggct tgttgcaaat tacacggtgt
    15301 tgaaggttat ttacatgtta gctgttgatt atcttccctg ataagaccag tatttagctg
    15361 ccaattgcta cgaaatcgtt ataatgtgcg acctcgtcct ccctgacgca gtttttgcgc
    15421 tgcggaaaag gtgacattgg cgcaacgaag gtatattttg ttttttgccg gaggatagca
    15481 gcagatcgct gcacaatgtc cgtcaagtct aacattgata ctctggggca aaatagaccg
    15541 gcgtcccggc ctgctggaat ttatcgctat gcatacagct gtcggggcat acgctttaca
    15601 gacggcggtg aaacgcctgt cacaatcaca ctaaacaaag agtacggaac ccactcatgg
    15661 atattcgtaa gattaaaaaa ctgatcgagc tggttgaaga atcaggcatc tccgaactgg
    15721 aaatttctga aggcgaagag tcagtacgca ttagccgtgc agctcctgcc gcaagtttcc
    15781 ctgtgatgca acaagcttac gctgcaccaa tgatgcagca gccagctcaa tctaacgcag
    15841 ccgctccggc gaccgttcct tccatggaag cgccagcagc agcggaaatc agtggtcaca
    15901 tcgtacgctc cccgatggtt ggtactttct accgcacccc aagcccggac gcaaaagcgt
    15961 tcatcgaagt gggtcagaaa gtcaacgtgg gcgataccct gtgcatcgtt gaagccatga
    16021 aaatgatgaa ccagatcgaa gcggacaaat ccggtaccgt gaaagcaatt ctggtcgaaa
    16081 gtggacaacc ggtagaattt gacgagccgc tggtcgtcat cgagtaacga ggcgaacatg
    16141 ctggataaaa ttgttattgc caaccgcggc gagattgcat tgcgtattct tcgtgcctgt
    16201 aaagaactgg gcatcaagac tgtcgctgtg cactccagcg cggatcgcga tctaaaacac
    16261 gtattactgg cagatgaaac ggtctgtatt ggccctgctc cgtcagtaaa aagttatctg
    16321 aacatcccgg caatcatcag cgccgctgaa atcaccggcg cagtagcaat ccatccgggt
    16381 tacggcttcc tctccgagaa cgccaacttt gccgagcagg ttgaacgctc cggctttatc
    16441 ttcattggcc cgaaagcaga aaccattcgc ctgatgggcg acaaagtatc cgcaatcgcg
    16501 gcgatgaaaa aagcgggcgt cccttgcgta ccgggttctg acggcccgct gggcgacgat
    16561 atggataaaa accgtgccat tgctaaacgc attggttatc cggtgattat caaagcctcc
    16621 ggcggcggtg gtggtcgcgg tatgcgcgta gtgcgcggcg acgctgaact ggcacaatcc
    16681 atctccatga cccgtgcgga agcgaaagct gctttcagca acgatatggt ttacatggag
    16741 aaatacctgg aaaatcctcg ccacgtcgag attcaggtac tggctgacgg tcagggcaac
    16801 gctatctatc tggcggaacg tgactgctcc atgcagcgcc gccaccagaa agtggtcgaa
    16861 gaagcaccag caccgggcat taccccggaa ctacgtcgct acatcggcga acgttgcgct
    16921 aaagcgtgtg ttgatatcgg ctatcgcggt gcaggtactt tcgagttcct gttcgaaaac
    16981 ggcgagttct atttcatcga aatgaacacc cgtattcagg tagaacaccc ggttacagaa
    17041 atgatcaccg gcgttgacct gatcaaagaa cagctgcgta tcgctgccgg tcaaccgctg
    17101 tcgatcaagc aagaagaagt tcacgttcgc ggccatgcgg tggaatgtcg tatcaacgcc
    17161 gaagatccga acaccttcct gccaagccca ggcaaaatca cccgtttcca cgcacctggc
    17221 ggttttggag tgcgttggga gtctcatatc tacgcgggct acaccgtacc gccgtactat
    17281 gactcaatga tcggtaagct gatttgctac ggtgaaaacc gtgacgtggc gattgctcgc
    17341 atgaagaatg cgctgcagga gctgatcatc gacggtatca aaaccaacgt tgatctgcag
    17401 atccgcatca tgaatgacga gaacttccag catggtggca ctaacatcca ctatctggag
    17461 aaaaaactcg gtcttcagga aaaataattt gtgacgcgcg gtgttttcat cgcgcttagc
    17521 aaagaacgta atcaacgccg ggcctgttaa cgctgcccgg cgtttttatt gccgttagct
    17581 aacggtagcc tgcaatttcc gctttcaacg cgctcatttc agcatcgcca tcaacaattc
    17641 ccagctcaaa gcagtatttc tttgtttccc ctggctcaat aaagggcaga cgcccctgcg
    17701 ctcgttcttt atcacgaccg tcaggaaaac tattactgac ctccagtccc ataacatact
    17761 cacccgcgcc taaatttttc cactggataa agttgggtag ctgcatggtg tcgaatttct
    17821 cgtaaattcc ccaccccagt tcggcgttca ccagagcaac tttactcatc ccctgactgt
    17881 cgctattcaa cgtgagatag taaacctgct cgtcaaaacc gggctgtggg gtacaaatct
    17941 ccagatgact ggttaaccct tccgccgcat gcggagttcg tggcgttacg cttttagccg
    18001 acagcaagat ttctggcctg tggcgataat aaaggccagc cgtaattaaa gtgataaaga
    18061 atttgcagcg gctggcgggt gaaaccatga ttagtcacct tgtcttcaat gcgcagcaca
    18121 ttttcgccat aacggcagcg aatggtcctt tccagcgtca gattttcgcc gaacagtcgc
    18181 gtttcccgta ctttgccatt gatgacaaat tcaatgccgt cgtcggtccg ttctgtgcga
    18241 taccccacct cttctgctgg agtcgcagcc aaacgcccgt gtaaccccag cgtttctcct
    18301 tcatcctcac aaggcgtgcc aatgtagcta agtccgcagg tagtcagtaa ccccgcgtaa
    18361 aagctacgta aaaatccgtt gccctgagac tcaaaaaaag cgggggcgac aatgccgttg
    18421 ggggtgataa aagaaagcgc cgtgtccttg tagctggccc atgcaatatc cagcgcgcga
    18481 tcttttacca ccgtaaatgc cagtcccgca ccagtacgga catcaaacgc ttctgtaccc
    18541 tttgctctgc cactacgtaa ctcatagtgt ttaattccgg caacctgcga gagatcgcca
    18601 atccacgacc aaatttcgtt tttcattgtg ctgcttcccg aatggacatg tcatggcgct
    18661 ggatgaacgc ttcgatttcc gcaaggcgag acgttccctc cattgggcca cgtctggtta
    18721 ccgccagcgc accgcaggca ttggcatatt gcagcgctcg atggacgtca aaccctagct
    18781 ggcggcaggc aatccacgcg ccaccaaagc agtctcccgc accggtcggg tcaacttctt
    18841 ccaccggata gctctcaaca tgaaactgct cattcgcgga gtagtaactg gcaccttgat
    18901 tgccgcgctt cacaatcacc tctttaacac cttcttcaag aaaacctgcg attgcacgct
    18961 ccggcgtcga atgtggcgac aagagcaaca cttcgccctc gctgggcata tagatatccg
    19021 ttaactcaag aacaaagtgg agggcgtcac gcatttctgg aatatcgagc atctctttac
    19081 gaatattagg gtcgaaagaa ataacaccac catttgcttt aacgatagtt accgcttttt
    19141 ttactgcgtc taccatatga aacgaaaaca gggaagagcc cataatatga aaatgggtac
    19201 agtccttcag aatattttca tcaacatgct gcgccgataa tttaccgcaa gcggcattct
    19261 taatattaaa aataaaatcg cgatcgccag agttatgata agtaacaaag gcactcccgg
    19321 tagcttccag aggtaagact gaaatccccc tgatatccac accgtcagca gccagacgat
    19381 gtatattaat atcaccaaag ccatcattcc ccacacagct aatgatgccg cacggaacgc
    19441 caagacgtgt cacctggtcg ataaaaatag cgggcgcacc actgggataa gggccgttcc
    19501 agatacctgg ttgatcaaat ggctggccga ttttactcgc cataatttca accagaattt
    19561 ctccaattgt gaagacctta ctcatatgat taattccttg aaatgattag ctgcgttttc
    19621 ttttatttct tacgtcaaaa taaacggcta caagaatgac taatccttta accaccatct
    19681 ggtaaaaata gggaacattc attaagttca tgccattatt aataacgccg atagttaatg
    19741 cgccgatcac cgtccccacc acggttccat agccgccgtt caggctggtg cctcccagta
    19801 cagccgcagc aatagcatcc agttcgtagc tcaacgcgga attcggttac ccggaataga
    19861 ggcgtgaggc gaggatcatc ccgctgatac ctgccagcac ggctgtaatc ataaagactt
    19921 taattttcaa gcgggtgaca tttatccctg aataaattgc cgcttcttta ttaccaccag
    19981 tgatataaat ttttcgtcca aaggttgttt tagtaagaat gaagtggtta atcagcaata
    20041 agatgattaa tatccagatt ggaataggta tatagagaaa ttctccattc cccagtgcca
    20101 gaaaggcatc atctttaatc atgatgggca taccatcggt cactatataa gcgataccac
    20161 ggaagatccc catagtagca acggtgacaa taaacgacgg gatccccgct atagccgtca
    20221 agccaccatt tatcatcccc agagccagtg ctgcaataat ggataatggg accaataaaa
    20281 taaatggaat tccccatgaa gccccaagcg cagcaaatgt gccaatcaat gcaatggttg
    20341 aaccgaccga taaatcaata tcgccaagca aaagtacata agtcattcca taggcggtaa
    20401 ttgcaattat cgaaacctga agaataatat tagtaatgtt gttggcggta aaaaaactgt
    20461 cattaataaa actgaacaga atgattaaca ccaccattcc actgaggata ccgccatatt
    20521 gcctgaagac ttttttaaaa ttatttgcaa tgggaatttc cgaaggtttc ggactggcaa
    20581 gagttttctc tgtcatttaa cgtactcctg ttgcagcggt cattacctgt gtctgcgtta
    20641 aattttcaca tgaataaata tcggcaatcg ttttattacg cattaccacc agacgatcgc
    20701 taagtgccat gacttctggc agttcagagg acaccagaat aattgctgtc cctgccgcag
    20761 ccagttgacg tatcacgtta tagatttcaa attttgcgcc gacatccact ccgcgcgttg
    20821 gctcatcgag caataaaata cgcggagttt tctccagcca cttcgataac acgattttct
    20881 gttgattacc gccgctcagc gctcccactg cctgatgtac agaactcact ttagtgttca
    20941 ttctggcaat tgattgcagc gtcttcgcct cttcttgtcg gtgattgatg agtcccatcc
    21001 gcgaagcgtt atattgaaac gccacatggt gcgtgttcat attgacgtcg tgcatcagca
    21061 ctaacccttc ttccttgcgg ttttcggtca caaaagcaat gccatgatca atagcctgtt
    21121 taggattagt gatcctgact tccttaccat caatcaacac agtcccctga tacgaaacga
    21181 ggccaaagag cgccttcatc acatcggaac gcccggcccc caccaggcca aaaaatccga
    21241 ggacctcccc cggacgcaca gcgaaactga tctctttaaa aagcgaagga tgggaaagat
    21301 tttttacttc cagttttgca ggaacatttt catccggtat ttccccaaga cgtgctggcc
    21361 aaatattttt catttcccga ccaaccattt gggcaatcaa atgctggata tcactgtttt
    21421 tcttttcatg cgtggcgata tactcaccgt cgcggatcac cgaaatatca tctgaaatcc
    21481 gcataatttc atccatgcga tgagagatat aaataaccgc acagcctcgc tgctttaatt
    21541 tttcaataat gttaaacaga atctccgctt cattatcact tagcgaagat gtcggttcat
    21601 ccataatcac gacatccgct gcatagctta aggctttagc aatttctacc agttgcctat
    21661 gtgccatcga catattgccg accatttcta gtgggtctag tggtatgccc cgttccgcga
    21721 ggagattctg gcaatctgcg agcatttttt tatcgttaat aatgccaaaa cgtcgcggtt
    21781 cattattggc ataaatattt tccgccacgg tcatattatt actcaggctc aattcctgaa
    21841 aaataatcgc aattcctaac tggcgtgaat gctgcggatt attaatggtg atagtttcac
    21901 cacgtagtgt tatcgttccc tgggttggcg gataaacacc ggccagtatt ttcattaatg
    21961 tcgatttacc ggcaccattc tcgcctaata aagtatgcac ccgcccttta cgtaaagaga
    22021 gggtaatatc ttttaatgct tgaacatgac caaatgtctt cgcaatatgc gaaacatcaa
    22081 gaataacatc cgtcataatg acctcggtgt cacaacaaaa cgccaataac gttttgttgt
    22141 gaggtgaaga tgtttactat ttacctgtat aaacgccggg ttgtaccggg atcatttttt
    22201 ctaccggttt accattgagg tgatcaacag cggcatcaat ggctttagca cccatttgat
    22261 cgggatattg ccgaatcacg gccgcaaacg ttttttcact gtcaacggca tcacgcgctt
    22321 ctttcatgcc atcaaaacca atgattttga tgttgtcgtt atgcgcagat tttgctgcga
    22381 taaccgctgc cagcgccgca tcatcaccaa agccaaacag accattcagg ttggcatttg
    22441 cctgcataat gttttgcgca gtcgttaacg cttcagcccg cgtaatacta ggctgttcag
    22501 caacaatttt aatatccggt gtatcgctta accctttctt aaaaccatca acgcgcgcaa
    22561 ccaccgattg tagtgccgga taagaaataa tggctacagt acctttacca ttcaaaagtt
    22621 tgcccattaa cttgcctgct tcaacgcctc ccgcatagtt atcggtcgca acatgcgata
    22681 cgaccggaac gccttccgca gcgacgtcga cggtgataac gggaataccg gccttatcgg
    22741 ctttaattat cgccgcctgg acgcctttcg aatcgaccgg agagataata atggcatcca
    22801 cttttttagt aataaaatcc tcaacatcag aaagttgttt gtttaaatcc tgattggcaa
    22861 atag
//
LOCUS       DADKRT010000053        22617 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.053, whole genome shotgun sequence.
ACCESSION   DADKRT010000053 DADKRT010000000
VERSION     DADKRT010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22617
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.053"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(50..1699)
                     /gene="actP"
                     /locus_tag="JQ356_001746"
     CDS             complement(50..1699)
                     /gene="actP"
                     /locus_tag="JQ356_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HAY4621868.1"
                     /translation="MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTA
                     GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAG
                     HLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVF
                     KKGATEREELRVSKITVLILGVIAIILGMLFENQNIAFMVGLAFAIAASCNFPIILLS
                     MYWSKLTTRGTMLGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
                     LGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH"
     gene            complement(1696..2010)
                     /locus_tag="JQ356_001747"
     CDS             complement(1696..2010)
                     /locus_tag="JQ356_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HAY4621869.1"
                     /translation="MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLI
                     AFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ
                     AS"
     gene            complement(2142..4101)
                     /gene="acs"
                     /locus_tag="JQ356_001748"
                     /pseudo
     CDS             complement(2142..4101)
                     /gene="acs"
                     /locus_tag="JQ356_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006816721.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
     gene            4494..5930
                     /gene="nrfA"
                     /locus_tag="JQ356_001749"
     CDS             4494..5930
                     /gene="nrfA"
                     /locus_tag="JQ356_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HAY4621870.1"
                     /translation="MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNET
                     FAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVR
                     ETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGC
                     ADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYF
                     DGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHG
                     KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQ
                     SINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHM
                     HAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQ
                     IKAEKQDFIKTVIPQWEEQARKNGLLSQ"
     gene            5975..6541
                     /gene="nrfB"
                     /locus_tag="JQ356_001750"
     CDS             5975..6541
                     /gene="nrfB"
                     /locus_tag="JQ356_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HAY4621871.1"
                     /translation="MSVLRSLLTARVLASGLLWSLNGITATPAAQASGDRYEVTQQRN
                     PDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEP
                     MYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRI
                     KICVDCHSDQRTNPNFNPASVPLLKEQP"
     gene            6538..7209
                     /gene="nrfC"
                     /locus_tag="JQ356_001751"
     CDS             6538..7209
                     /gene="nrfC"
                     /locus_tag="JQ356_001751"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HAY4621872.1"
                     /translation="MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
                     QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKY
                     GEVSQ"
     gene            7206..8162
                     /gene="nrfD"
                     /locus_tag="JQ356_001752"
     CDS             7206..8162
                     /gene="nrfD"
                     /locus_tag="JQ356_001752"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HAY4621873.1"
                     /translation="MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQ
                     AGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
                     LYMVVLVLWLAKIFEHDLLAQQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAHFVH
                     RMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPM
                     LLKSWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA"
     gene            8182..9900
                     /locus_tag="JQ356_001753"
     CDS             8182..9900
                     /locus_tag="JQ356_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014640253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY4621874.1"
                     /translation="MDVFLPEVGFLALLLSLGVNVLTPLTAFAGVRLRWPAMMRLTCI
                     GILAQCALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLW
                     VLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEG
                     RDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDAASARICWRWALPGW
                     SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFRH
                     WSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGW
                     RARDGGPAVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPY
                     FNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLN
                     LQPGQQVTLAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQ
                     QMMEPSIRWNGIHDWYVVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWR
                     GRKRDE"
     gene            9893..10276
                     /gene="nrfF"
                     /locus_tag="JQ356_001754"
     CDS             9893..10276
                     /gene="nrfF"
                     /locus_tag="JQ356_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HAY4621875.1"
                     /translation="MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRC
                     PQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQT
                     LVLWALPVVLLLLMALILWRVRAKR"
     gene            10273..10869
                     /gene="nrfG"
                     /locus_tag="JQ356_001755"
     CDS             10273..10869
                     /gene="nrfG"
                     /locus_tag="JQ356_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HAY4621876.1"
                     /translation="MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRD
                     PLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL
                     RGENAELYVALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY
                     AQAIELWQKVMDLNSPRINRTQLVESINMAKLLQRRSD"
     gene            11210..12523
                     /gene="gltP"
                     /locus_tag="JQ356_001756"
     CDS             11210..12523
                     /gene="gltP"
                     /locus_tag="JQ356_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HAY4621877.1"
                     /translation="MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPA
                     GDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITL
                     ANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVT
                     VANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ"
     gene            complement(12714..12968)
                     /locus_tag="JQ356_001757"
                     /pseudo
     CDS             complement(12714..12968)
                     /locus_tag="JQ356_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005118502.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
     gene            complement(12953..13402)
                     /locus_tag="JQ356_001758"
     CDS             complement(12953..13402)
                     /locus_tag="JQ356_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005045755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY4621878.1"
                     /translation="MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADS
                     WFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPGSLDYPQAKVLAEKAAQAGSK
                     EGEVTLAHILVNTQAGKPDYPKAISLLEKPRKIWRTTLPSMPKCCLV"
     gene            complement(13496..15643)
                     /gene="fdhF"
                     /locus_tag="JQ356_001759"
     CDS             complement(13496..15643)
                     /gene="fdhF"
                     /locus_tag="JQ356_001759"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(15224..15226),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HAY4621879.1"
                     /translation="MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLK
                     GYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDA
                     IQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNA
                     INEIDNTDLVFVFGYNPADSHPIMANHVINAKRNGAKIIVCDPRKIETARIADMHIAL
                     KNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS
                     EIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRG
                     QNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAH
                     GEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGE
                     HEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHL
                     CPDFYGATYEKMGEQGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPI
                     DKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEA
                     LVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCA
                     VRVEPIADQRAAEQYVIDEYNKLKTRLREAALA"
     gene            complement(15841..17307)
                     /gene="mdtP"
                     /locus_tag="JQ356_001760"
     CDS             complement(15841..17307)
                     /gene="mdtP"
                     /locus_tag="JQ356_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MdtP"
                     /protein_id="HAY4621880.1"
                     /translation="MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKL
                     ADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDA
                     GSQLQVAALGMLNRQRVSANGFLSPYAMDAPSLGMDGPYYTEATVGLFAGLDLDLWGV
                     HRSAVAAAIGAHNAALAETAAVELSLTTGIAQLYYSMQASYQMLDLLEQTRDVIDYAV
                     KAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRESLRALIGAGASDMPE
                     IKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFYPSFDIKAF
                     FGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVL
                     NAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPV
                     LAEEMSLLMLDSRRVIHSIQLMKSLGGGYQAAPVVEKK"
     gene            complement(17304..19355)
                     /gene="mdtO"
                     /locus_tag="JQ356_001761"
     CDS             complement(17304..19355)
                     /gene="mdtO"
                     /locus_tag="JQ356_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter permease subunit
                     MdtO"
                     /protein_id="HAY4621881.1"
                     /translation="MSALNSLPLPVVRLLAFFHEELSERRPGRVPQIVQLWVGCLLVI
                     LISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEP
                     LIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCI
                     VVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREAL
                     ALQKLNVFCLADDANWRTQSAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKL
                     ASEINKLQHAVAEGQCWQSDWRISESEAVAARECNLENICQTLLQLGQMNPNTPPTPA
                     AKPPSMVADAFTNPDYIRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVG
                     SSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERS
                     SYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEART
                     LPQKLAGALGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLD
                     SEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGL
                     ATALSCSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGAT
                     Q"
     gene            complement(19355..20386)
                     /gene="mdtN"
                     /locus_tag="JQ356_001762"
     CDS             complement(19355..20386)
                     /gene="mdtN"
                     /locus_tag="JQ356_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter periplasmic adaptor
                     subunit MdtN"
                     /protein_id="HAY4621882.1"
                     /translation="MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYA
                     SADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQI
                     MLTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTA
                     QRAAEADLNAVLLQAQSAASAVSGVDVLVAQRAAVEADIALTKLHLEMATVRAPFDGR
                     VISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKT
                     FEGKVDSIGYGVLPNDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGA
                     SAVANLEPQ"
     gene            complement(20405..20680)
                     /locus_tag="JQ356_001763"
     CDS             complement(20405..20680)
                     /locus_tag="JQ356_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621883.1"
                     /translation="MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWF
                     FCAIASLILTLITRRIIQRANINLAFVGIIYTALFAVYAMLFWLAFF"
     gene            complement(20889..>22617)
                     /gene="yjcS"
                     /locus_tag="JQ356_001764"
     CDS             complement(20889..>22617)
                     /gene="yjcS"
                     /locus_tag="JQ356_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkyl sulfatase YjcS"
                     /protein_id="HAY4621884.1"
                     /translation="GEDYKFDINAPAPETVNPSLWRQSQLNGISGLFKVTDRMYQVRG
                     QDISNITFIEGDTGIIVIDPLVTPPSAKAALDLYFQNRPQKPIVAVIYTHSHTDHYGG
                     VKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSHRALYSYGLLLAHNPQGNI
                     GNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALK
                     ALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVRGN
                     KHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYYGSVS
                     HNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVISLAQEANKQGDYRW
                     SAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSH
                     GTTGSPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNY
                     RKTLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFD
                     LWVNIVTPN"
BASE COUNT         5074 a         5960 c         6194 g         5389 t
ORIGIN      
        1 ctggagagga agagtattcc ccggtcaggc gaccggggaa ggggagagat taatgtgcgc
       61 ggccttgctc aacgccaaag ccggtctggg agcggataaa ctgcgcacgg aacagttcac
      121 gctcgcgcgc accttccgct gagttatcgg ttgccgagaa gaaccagatg ccgaggaatg
      181 ccacgctgat agagaacagc gccgggtatt catacgggaa gatggctttt tcgtgaccga
      241 ggatctgtac ccaaatagtc gggccgagga tcatcagcac cactgcggta atcaacccca
      301 gccagccgcc cagcatcgtg ccacgggtag tcagtttcga ccagtacatg gaaagcagaa
      361 tgatcgggaa gttacagctc gccgcgatgg caaacgcaag gcctaccata aaggcgatgt
      421 tctgattctc aaacagcatg ccgaggataa tcgcaatcac acccaaaatc aggacggtga
      481 ttttcgatac ccgcagttct tcacgttcgg tcgcaccttt tttgaagacg ttagcgtaca
      541 agtcatgcga aaccgcggat gcgcccgcca gcgtcagacc cgcaaccacc gcgaggatag
      601 tggcgaaagc aaccgctgaa ataaaaccga ggaacaggtt gccgcccact gcattcgcca
      661 ggtgaacggc cgccatgttg ttaccaccaa tcagatggcc cgccgcgtct ttatattccg
      721 gattcgcacc aaccagcatg atcgcgccga agccgataat aaaggtcaga atatagaagt
      781 agcccataaa cccggtggcg tagaacacgc tcttacgtgc ttcgcgggca tcgctgactg
      841 taaagaagcg catcagaatg tgcggcaagc ccgccgtacc aaacatcagt cccagaccca
      901 gagagagcgc ggagatcgga tctttcacca gcccgcccgg cttcatgatg tcgacacctt
      961 tcgggtgtac cgccatcgct tcgctgaaca gattattgaa gctaaagccg acgtgtttca
     1021 tcaccataaa ggccataaag ctggcaccga acagcaacag cacggcttta ataatttgca
     1081 cccaggtggt cgccagcatg ccgccgaaca ggacgtacat catcatcagc acgccgacca
     1141 gcaccaccgc aatgtgatag ttaaggccaa acagcagctc gatcagttta cctgcgccta
     1201 ccatctgggc gataaggtaa agcgccacca ccaccagaga accacaggcc gaaagaatac
     1261 gaatcggccc ttgtttcagg cggtaagagg ctacatcggc aaaggtgtag cgtcccaggt
     1321 tacgcagacg ttcggcaatc aggaacaaaa tgatcggcca gcccaccagg aagcccagcg
     1381 agtaaattaa gccgtcatag ccggaggtaa acaccagcgc ggagatcccc aaaaatgagg
     1441 cggcggacat atagtcaccg gcaatcgcca gcccgttctg gaagcctgtg atattgccgc
     1501 ctgccgtgta gtagtcgcta cgagaacgta cgcgttttga tgcccagtag gtaatgccga
     1561 gcgtaaacac gacgaaaatc aggaacataa taatcgcctg ccagttcgtt ggctggcgct
     1621 ctacggcccc gctaatagca tccgcggcgt tagctgcgaa agggagtgtg gcggcaagcg
     1681 ccgtcagaac tcttttcatg atgcttgtac ctcatgcagg acttcattat taagacggtc
     1741 gaattcgccg ttcgcccgcc agatgtagat accggtgaga acaaaggaga tcacaatcac
     1801 tccaacacca attggaatac cgcgtgtgac gctggtgttc ggattcagcg gcgtgcccag
     1861 ccagccgggc gcgaaggcga tcagtaaaat aaagccgata taaactgcca gcataataat
     1921 cgacaggatg gtggcaaacc gttgccgttt ttcgactaac tccctgaaat gcgcattgtc
     1981 ttctatccgc tgataaatag tgccattcat cacagattct ccagaggtaa tgtagggatt
     2041 gttttaattc ccgctccctt atgggagaag gttaacgctc gggtaaccct tgccgaatgt
     2101 aggccggata aggcgtttac gccgcatccg gcaattgtgg gttacgatgg catcgcgata
     2161 gcctgcttct cttcaagcag cttctcgact acgccaggat cggcaagcgt cgaggtatcg
     2221 cccaggttgc tggtatcgcc cgccgcaatt ttgcgcagaa tacggcgcat aattttgccg
     2281 gagcgggttt taggcaggga gtcggtccag tgcagcacgt ctggcgtcgc cagcgggcca
     2341 atctctttac gcacccagtt gcggacttct gcgtacagtt ctggtgacgg ttcctccccg
     2401 tgattaagcg tgacgtaggc gtagatcgcc tgacctttaa tattgtgcgg aatacctact
     2461 acggcggctt cggcaatctt cggatgcgcc accagcgccg actcaatctc tgccgtcccc
     2521 agacggtgac cggagacgtt cagcacgtcg tccacatgcc cggtgatcca gtaatagcca
     2581 tcttcatcgc gacgcgcgcc gtcgccgctg aaatacatat ttttgaaggt ggagaagtag
     2641 gtctgttcaa aacgttcgtg atcgccaaac agcgtacgcg cctgacccgg ccaggagtcg
     2701 gtgatcacca ggctgccttc ggtagcgcct tccagcgggt taccttcgtt atcgaccagc
     2761 gccggttgca cgccgaagaa cggacgtgtt gccgaaccgg ctttcagccc ggtagcgcca
     2821 ggcagtggcg tgatcatgaa accgccagtt tcggtctgcc accaggtatc gaccaccgga
     2881 catttctcgt tgccgatttt tttccagtac cactcccacg cttccgggtt aattggctcg
     2941 cccacggaac cgagaatgcg cagcgacgaa cggtcggtac cctcgatcgc tttatcgcct
     3001 tccgccatca gcgcgcggat cgccgtgggt gcggtataga gaatattgac ctgatgcttg
     3061 tccaccacct gcgccatacg ggcaggcgtc ggccagttgg gtacgccttc aaacatcagc
     3121 gtggtcgcac cgcaggccag cgggccgtac agcaagtaac tgtgtccggt cacccagccc
     3181 acatcggcgg tgcaccagta gatatcaccc ggatgataat caaagacata tttaaaggtc
     3241 agcgccgcgt acaccagata accgccggta gtatgcagca caccttttgg cttaccggta
     3301 gaaccggagg tgtagagaat aaacagcgga tcttcggcgt tcatctcttc cgcctggtgc
     3361 tgatcgctcg cttgctcaac caggtcgtgc caccacaggt cgcgcccttc ctgccagtca
     3421 attttcccgc cagtacgctt cagtaccacc acatgctcta cgctggtgac gttcgggttt
     3481 ttcagcgcgt catcaacgtt tttcttcagc ggaatactgc cgcccggcac gcacaccttc
     3541 gtcggaagtg atcaccagtc gtgagttgga atcaataatg cgcccggcaa cggcttccgg
     3601 cgagaagccg ccgaaaatca ccgaatgcac cgcgccaatg cgggcgcagg ccagcatcgc
     3661 aaccgcggct tccggcacca tcggcatata aatcgccacc acatcacctt ttttaatgcc
     3721 cagctcgagc agggtattgg cgaagcggca gacgtcgcgg tgcagctctt tatagctgat
     3781 atgtttgctc tggctggcgt cgtcgccttc ccagatgatg gcggtacgat cgccgttttc
     3841 ttgcagatgg cggtcaaggc agtttgccgc cagattcagc gtgccgtcct cgtaccattt
     3901 aatggacaca ttaccggggg caaaggaggt gtttttcacc ttctggtaag gtttgatcca
     3961 gtcaagaatt tttccctgtt cgccccagaa ggtatcaggt acgttaatag attgttgata
     4021 cattgcctcg tactgctgag ggtttatcag gcaacggtct gcgatgttgg caggaatggt
     4081 gtgtttgtga atttggctca tgcttttgtt ctccttgtag aatgttaata atatgtgaca
     4141 taagcgttaa atgtaggggt attggcagtt ttgtttagta tttgggcgac agatcacgca
     4201 aaagtagaat tgtgcaaata aacggcaggg taatttttga aggtcagcaa caaaagttga
     4261 ttaattcttt gaggaacatg cagttatgca tgctgttgaa aaagaggaag atactgacta
     4321 actctaaagt ggtattttac atgcacttac aattgattaa agacaacatt cacagtgtgg
     4381 ttatttgtta cacatagggg cgagcaatgt catgacagtg taggtgcggt tactgtcgtg
     4441 aaaaacaata aaaaccgcca ttgcaacaat ggcgcaattc ggatgaagcc cctatgacaa
     4501 ggataaaaat aaacgcacgc cgtatcttca gcttattgat tccttttttc tttttcactt
     4561 ctgttcacgc tgaacaaacg gcagctcccg caaaacctgt aactgtggaa gcgaagaatg
     4621 aaacctttgc cccgcagcat cccgatcaat atctctcctg gaaagccacc tcggaacagt
     4681 cagagcgtgt tgacgccctg gcggaagatc cacggctggt gatcctgtgg gcggggtatc
     4741 ccttctcgcg cgattacaac aagccgcgtg gacatgcctt tgctgtgacc gatgtgcgtg
     4801 aaaccctgcg taccggtgcg ccgaaaaatg ctgaagatgg tccgctaccg atggcgtgct
     4861 ggagttgtaa aagcccggat gtggcgcgtc tgatccagaa agacggcgaa gatggctact
     4921 tccacggtaa gtgggcgcgc ggcggcccgg aaatcgtcaa caacttaggt tgtgccgact
     4981 gccataacac cgcctcacca gagttcgcca aaggcaaacc ggagttaacc ctttcccgtc
     5041 cgtatgcggc tcgcgcgatg gaagccattg gtaaaccttt tgagaaagcc ggacgtttcg
     5101 accagcaatc gatggtttgc ggtcagtgcc atgtggagta ttacttcgac ggcaaaaaca
     5161 aagcggttaa attcccgtgg gatgacggca tgaaagtcga aaatatggag cagtattacg
     5221 acaaaattgc cttctctgac tggactaact ccctgtcgaa aacgccaatg ctgaaagcgc
     5281 agcacccgga atatgaaacc tggacagcgg gcattcacgg taaaaacaac gtgacctgta
     5341 tcgactgcca tatgccaaaa gtgcagaacg ccgaaggcaa actctacacc gaccataaaa
     5401 ttggtaatcc gtttgataac ttcgcccaga cttgtgcgaa ctgccatacc caggacaaag
     5461 ctgccttgca aaaagtggtc gcggaacgta agcagtcgat taacgacctg aaaatcaagg
     5521 ttgaagatca actggttcac gctcacttcg aagcgaaagc agcgctggat gcaggcgcga
     5581 cggaagctga aatgaagcca attcaggacg atatccgtca tgcccagtgg cgctgggatc
     5641 tggcgatcgc ttcccacggc attcatatgc acgcaccgga agaaggttta cggatgctcg
     5701 gtacggcgat ggataaagcg gcggatgcac gcaccaaact ggcgcgcctg ctggcgacca
     5761 aaggcatcac ccatgaaatc cagatcccgg atatctcaac caaagagaaa gcccagcagg
     5821 ccattggcct gaacatggaa caaatcaagg ccgagaagca ggacttcatc aaaacggtga
     5881 tcccgcagtg ggaagaacag gcacgtaaaa acggtctgtt aagccaataa ccccgttccg
     5941 cctcgcaagg ggcggaaaac acaatggagt gaatatgagc gtattacgtt cgttattaac
     6001 tgctagggtg ctggcgtcgg gcctgttgtg gagcctgaac ggaattaccg ctacccctgc
     6061 ggcgcaggca tctggtgatc gctacgaagt tacccagcag cgtaacccgg atgccgcctg
     6121 tctggactgt cataaaccag ataccgaagg tatgcatggc aaacatgctt ccgttatcaa
     6181 cccgaataac aaattgccgg tcacctgcac caactgtcac ggccagccat caccgcaaca
     6241 ccgcgaaggg gtgaaagatg tgatgcgctt taacgagccg atgtacaagg tcggagagca
     6301 gaacagcgtc tgtatgtcct gtcatctgcc ggaacagttg caaaaagcgt tctggccgca
     6361 cgatgtccac gtaaccaaag tggcgtgcgc cagctgccat tccctgcatc cacagcaaga
     6421 tacgatgcag acgttaagtg acaaaggacg gattaagatt tgcgtcgatt gccacagcga
     6481 tcagcgcacc aatccgaact ttaacccggc gtctgttccg ttgcttaagg agcagccatg
     6541 acctggtctc gtcgccagtt tctcaccggc gtcggcgtgc tggcagccgt cagcggcacc
     6601 gcagggcgcg tggtggcgaa aacgttgaat atcaatgggg tgcgttacgg catggtgcat
     6661 gacgagtcgt tatgcatcgg ctgtaccgcc tgtatggatg cttgtcgaga agtgaacaag
     6721 gtgccggaag gcgtctcgcg cctgacgatt attcgtagcg agccgcaggg cgaatttcct
     6781 gatgtgaaat atcgcttctt ccgtaagtct tgccagcact gcgatcatgc gccgtgcgtt
     6841 gacgtctgcc cgaccggtgc gtcttttcgt gatgccgcta gcgggattgt cgatgttaat
     6901 cctgatctct gcgtcggttg tcagtactgc atcgccgcct gtccgtaccg cgtgcgcttt
     6961 atccatccgg tcacgaagac ggcggacaaa tgcgatttct gccgtaaaac caatttgcag
     7021 gccggtaagc tgcccgcgtg cgttgaggct tgcccgacga aggcgctgac gtttggcaat
     7081 ctggacgatc ctaacagtga gatttcgcaa ctgctgcgcc agaagcctac ttaccgctac
     7141 aagctggcgc tgggaaccaa accgaagctg taccgcgtac cgtttaaata cggggaggtg
     7201 agccaatgac gcagacttcc gcatttcatt ttgaatcgct ggtgtgggac tggccgattg
     7261 ccatctacct gtttttgatt ggtatttctg ccggtctggt gacgctggcc gtgctgttac
     7321 gtcgcttcta cccgcaggcg ggcggtgcag acagtacgtt gctgcgcacc acgctgattg
     7381 tcgggccggg cgcggtgatc ctcggtctgt tgatcctcgt cttccacctg acaagaccgt
     7441 ggaccttctg gaagctgatg ttccactaca gttttacctc ggtgatgtcg atgggggtga
     7501 tgctgtttca gctttacatg gtggtgctgg tgctgtggct ggcgaaaatc tttgaacatg
     7561 atttgcttgc ccagcaacaa cgctggttgc cgaagctggg gatcgtgcaa aaggttctga
     7621 gcctgctgac gcccgttcat cgcggactgg aaacgctgat gctggtgttg gcggtgctgc
     7681 tgggggctta taccggcttt ctgctgtcgg cgctgaaatc gtatccgttc ctcaataacc
     7741 cgatcctgcc ggtgctgttc ctcttctccg gcatctcgtc cggtgcggcg gtggcgctga
     7801 tcgccatggc gatacgccaa cgcagtaacc cgcattccac ggaagcgcac tttgttcacc
     7861 ggatggaaat ccccgtggta tggggtgaaa tcttcctgct ggtggcgttt tttgtcggtc
     7921 tggcgctggg cgatgacggt aaagttcgtg cgctggtggc ggcattaggt ggcggtttct
     7981 ggacgtggtg gttctggctt ggtgtcgccg ggctggggct gattgtgcca atgttgctca
     8041 aatcgtgggt caatcgcagt tccggcattc ctgccgtgct ggcggcgtgt ggggccagtc
     8101 tggtcggcgt gttgatgctg cgctttttca ttctctacgc cggacagttg acggtggcgt
     8161 aagccagaaa agaggtggtt tctggacgta ttccttcctg aagtcggttt tctggcgttg
     8221 ttgttaagtc tcggggtcaa cgtgttgacc ccgttgacgg cctttgcggg agtgcggttg
     8281 cgctggcctg ccatgatgcg actcacttgc atcggcattc tggcgcagtg cgcgctcctg
     8341 ctgctcgcct ttggcgtact gacgtattgt tttctcatca gcgatttctc ggtcatttat
     8401 gtcgcccaac atagctacag cctgctgtcg tgggaactca aactggcggc ggtgtggggc
     8461 ggtcatgaag gttcgctgct gctttgggtg ctgctgcttt ccgcctggag cgcgctgttt
     8521 gcctggcatt atcggcagca aaccgatccg ctatttccgc tgacgctagc cgttttatct
     8581 ctcatgctcg ccgcactgct actgtttgtg gtgctgtggt ccgatccctt cgtgcggata
     8641 tttccaccag caatcgaagg ccgcgatctc aatccgatgc tgcaacatcc cggtcttatc
     8701 tttcatccac cgctgcttta ccttggctat ggcggtttga tggtagcggc gagcgtggcg
     8761 ctggcgagtc tactgcgcgg cgagtttgat gcggccagcg cccgaatttg ctggcgctgg
     8821 gcgttacctg gctggagtgc attaacggcg gggatcatcc tcggttcctg gtgggcctac
     8881 tgcgaactcg gctggggcgg ctggtggttc tgggatccgg tggaaaatgc ctctttatta
     8941 ccctggcttt ctgccactgc gctgctgcac agtttatccc tgacacgcca gcgggggatt
     9001 tttcgccact ggtcgctgtt actggcgata gttactctga tgctgtcgct gctgggcacc
     9061 ttaattgtcc gttctggcat tctggtttcg gttcatgcgt tcgcgctgga taacgtccgc
     9121 gccgtgccgt tgttcagcct gtttgcactg attagccttg cgtctctggc tctgtatggc
     9181 tggcgagcgc gggacggtgg cccggcggtg cgtttttcgg ggttatcgcg ggaaatgtta
     9241 atcctcgcta cgctgttgct gttttgcgca gtgctactga tcgtgctggt gggaacgctt
     9301 tatccgatga tttacggtct gctgggctgg ggacgcctct ccgttggcgc gccgtatttt
     9361 aaccgcgcga cgttaccgtt tggtctgttg atgctggtgg tgattgtgct ggcgacgttt
     9421 gtctctggca aacgcgtgca gcttccggcg ctggtagctc atgcgggcgt gctgttattt
     9481 gccgctggga tcgtggtttc cagcgtcagc cgtcaggaga tcagcctgaa tttacagccg
     9541 ggtcagcagg tgacgctggc aggatacacc ttccgttttg agcgcctcga tctgcaagcc
     9601 aaaggcaatt acaccagcga aaaagcgata gtggcactgt ttgaccatca gcaacgcatt
     9661 ggtgaactga tgccggagcg gcgtttttac gaagcacgtc gtcagcaaat gatggaaccg
     9721 tcaattcgct ggaacggcat ccatgactgg tatgtggtca tgggtgaaaa aaccggagcg
     9781 gatcgttacg cttttcgctt gtatgtacaa agcggtgtgc gctggatctg ggggggagga
     9841 ttgttgatga ttgcgggcgc attgttaagc ggatggcggg ggaggaagcg cgatgaataa
     9901 aggacttctc acgctactgc tgttatttac ctgttttgcg cgcgctcagg tcgtagacac
     9961 ctggcaattc gccaatccgc aacaacagca acaggcgtta aatattgcca gccagttacg
    10021 ttgtccgcag tgccagaatc aaaacttact ggaatccaac gcgccggtgg cagtcagtat
    10081 gcgccatcag gtttacagca tggtggcgga ggggaagaac gaagtcgaaa tcattggctg
    10141 gatgaccgaa cgctacggag attttgttcg ctataaccca ccgttaacgg gtcagacgct
    10201 ggtgttgtgg gcgctgccag tggtgttgtt actgctgatg gcactgatcc tctggcgagt
    10261 gagggcgaag cgatgaaaga gcccaaaata ccggtgaaaa tgctgacaac actcacgatt
    10321 ttgatggtat ttctctgtgt cggcagttat ctgttaagtc caaaatggca ggcggtacat
    10381 gcggaatatc agcgtcagcg cgatccgcta catcagtttg ccagccagca aaccccggaa
    10441 gcgcagcttc aggcattgca ggataaaatc cgcgctaatc cacaaaacag cgaacaatgg
    10501 gcgttactgg gcgagtacta tctgtggcaa aacgattaca gcaattcgct gctggcgtac
    10561 cgtcaggcgt tgcaactacg tggtgagaac gctgaactgt atgtggcgct ggcgacggtg
    10621 ctttattacc aggccagcca gcatatgacc gcccagactc gcgcaatgat cgacaaagcc
    10681 ctcgcgctgg actctaacga aatcaccgct ctgatgctgc tggcttccga tgcgtttatg
    10741 caggcgaatt acgcgcaagc catcgaacta tggcaaaaag tgatggatct caactcaccc
    10801 cggatcaacc ggacacagct ggtcgagtcg attaatatgg cgaaattgtt gcagcggaga
    10861 tcggattaat catctggtga tgaagattat gttattgagc tgcataaaaa ataatcgaat
    10921 gaacatatgc caaaaataat cactaatcag tattattgca gattaaacaa ataaaaatct
    10981 ttccataaca aatggttatt cattaatcct gacataaact cgcgttatta tgcattaatg
    11041 cagcgaaaag ctctgttgtt aaagggttgc gcaacatacc gcgcaaatga tactgatcat
    11101 aagcgttaaa aaaatctaca aaccaacgca acacaattca tgcctggcag tatgtcacgt
    11161 tctcgcgttt ctgaacgggg aacggcgctc cattgaggaa gttattctga tgaaaaatat
    11221 aaaattcagc ctggcctggc agattctgtt tgctatggtg ctgggcattc tcctgggaag
    11281 ctacctgcac taccatagcg acagccgcga ctggctggtc gtcaatttgc tctctccggc
    11341 gggtgatatc ttcatccatc tgattaaaat gattgttgtg ccgattgtga tctccacgct
    11401 ggtggtgggt atcgcgggtg tgggtgatgc caaacagctc gggcgtattg gcgcgaaaac
    11461 cattatttac ttcgaggtga tcaccaccgt cgccatcatt ttggggatca ctctggcgaa
    11521 cgtcttccag cccggtgccg gggtggatat gtcgcagctg gcgaccgtcg atatctcgaa
    11581 atatcagagc actacggaag cggtacaaag cagttcccac ggcattatgg gcacgatttt
    11641 gtcgctggtg ccgacgaaca ttgtggcgtc gatggcgaaa ggcgaaatgc tgccgatcat
    11701 cttcttctcg gtgctgtttg gtctggggct ttcctccctg cccgcgacgc atcgtgaacc
    11761 gctggtgacc gtgttccgct ccatctctga aaccatgttt aaagtgactc acatggtgat
    11821 gcgttatgca ccggtgggtg tgtttgcgct gattgcggtg acggtggcta actttggttt
    11881 ctcttctctg tggccactgg cgaaactggt gctgctggtg catttcgcca ttctgttctt
    11941 cgcgctggta gtgctgggaa ttgtggcgcg cctgtgcggg ttaagcgtct ggatcctgat
    12001 tcgtattctg aaagatgagc tgattctggc gtactccact gccagctctg aaagcgtact
    12061 gccgcgaatt attgagaaga tggaagccta cggagcaccg gcgtcgatca ccagcttcgt
    12121 ggtgccgacc ggttactctt ttaaccttga tggttcgacg ctgtatcaaa gtattgccgc
    12181 tattttcatc gctcagctgt atggcattga cctgtccatc tggcaggaaa tcattctggt
    12241 gctgacgctg atggtgacct cgaaggggat tgctggcgtg ccgggcgtgt cgtttgtggt
    12301 gttgctggca acgctgggta gcgtaggtat tccgctggaa ggtctggcgt ttattgctgg
    12361 tgttgaccgt atcctcgaca tggcgcgtac tgcgctgaac gtggtgggta atgcgctggc
    12421 ggtgctggtg attgccaagt gggaacacaa atttgaccgc aaaaaggcgc tggcttatga
    12481 gcgtgaagtg ctgggcaaat ttgataaaac tgcggatcaa taattgaaga ttgccggggt
    12541 tatccacccg gcaatgtgtg gatgcctgat gcgacgctgg tgcgtcttat caggcctacg
    12601 ccagacagcg caatagcctg atttagcgtg attttgtagg tcggataagg cgtttacgcc
    12661 gcatccgaca tcaacgcctg atgcgacgct taacgcgtct tatcaggcct accttaaccg
    12721 ttggttaatt tttcaaactc ttcacacccg gtatcaaacc cttccataca gctcaggttc
    12781 aaccagtgca gcgccttttg tttgttcttc tcgataaaac cttcttcacc gtttaagaac
    12841 atcattcccg cccagtactc ggaataaccg gttcgggaaa ttgcagagct gcgtttgaaa
    12901 tactaggttg ccttgtcatc gtcggcctta atacccacgc cgttggcgta aatcaaacca
    12961 agcagcattt gggcatcgac ggcagagtcg ttctccagat cttccgaggc ttttctaaca
    13021 gcgaaatcgc ctttggataa tccggtttac ccgcttgagt atttaccaga atatgcgcca
    13081 gcgttacttc accttcttta ctgcccgctt gcgccgcttt ctctgcaaga acttttgctt
    13141 gtggatagtc cagactgccc ggattggtga ttttgatctg cgccaacagc gcgcaggcat
    13201 cagcatcacc gctgtcggcg gctttctgtg cccaatattc ggctttgctc aaatcgccgg
    13261 agctaaacca gctgtcggca agaaaatatt gtgcgcgtcg gtccccggcc tctgctgcct
    13321 ttaaatactg gctgccaggc tcggagtcgt tggcgtgggc aaagaatgtc aaaaacaaca
    13381 tcaatgcgat aatttttttc attttgataa tacgattggg tagggagtaa ccagtataaa
    13441 gagttcgaat ggataaaaaa acagcctccg aaaggaggct gtagaaagga ctgtattacg
    13501 ccagtgccgc ttcgcgcagg cgagttttca acttgttgta ctcgtcaatc acgtactgct
    13561 cggcggcgcg ctgatcggcg atcggctcga cgcgcacggc gcagtatttg tattccggcg
    13621 ttttcgtaat cgggcttaag ttttcggtaa ccagctcgtt acaggcacca atccaccact
    13681 ggtaggtcat gtaaatcgcc cctttgttcg gacgatcgct gacctgcgca cgggtgataa
    13741 ttttgccttt acgcgagtgc acccaaacca atgcctcatc ttcaataccc agacgtttgg
    13801 cgtcttcggt attgatttgt gcgtagccag gttcatcagc cagcgccgcc agtgccgcac
    13861 agttaccggt catcgaacgg caagagtagt gaccaacttc acgcaccgtt gacagtacca
    13921 tcgggtactc gtcggtgagt ttgtcgattg gcgctaccca gtcgcaggtg aagaactgcg
    13981 ccagaccgtt cggggtatca aacttctctt taaacagata agaagtcccc tgatcggcat
    14041 ctgaagtatc gcggcaaggc cactgaatga agccctgttc gcccattttc tcgtaagtcg
    14101 caccgtagaa atccgggcac agatgacgca actcatccca gatctcctgg gtgttgttgt
    14161 agtgcatcgg ataacccata cgggtggcga tttcactgat gatttgccag tccgttttca
    14221 gatcccattt cggttcaact gctttgaaga aacgctggaa gccacggtca gccgcagtaa
    14281 acacgccttc atgctcgccc cacgacgttg acggcaaaat gacatccgcc gccgacgcgg
    14341 ttttggtcat aaagatgtcc tgaacgatga ccagttccag atcttcaaag gctttacgta
    14401 ctgccgacag ctccgcatca gtttgcagcg gatcttcgcc cataatgtac gcggcacgca
    14461 cttcgccatg cgctgcgcgg tgcggcagct cgctgatgcg atagccggta tgagcaggca
    14521 ggctttccac gccccaggct ttggcgaatt tctcgcggtt agccggatct ttcacgtact
    14581 ggtatcccgg atacgtatcc ggcagcgcgc ccatatcgca ggcaccctgc acgttgttct
    14641 gaccacgaac cgggtttaca cccgcatgcg gcttaccgag gttaccggtc agcatcgcga
    14701 ggctggtcag agaacgcacg gtttccacgc cctggtagaa ctgggttaca cccatgcccc
    14761 acaggatggc ggcgcttttc gcctgggcat acatccgtgc cgcctgacga atctcactgg
    14821 cgctgacgcc ggtgatatct tcaaccgact ccggcgtgta gccttcaacg attttacgat
    14881 actcttcaaa gccttctgta cgggaagcga cgaacgcttt gtcgtacaga ttttcttcaa
    14941 taatgacatg gcccatcgca ttcaacagcg cgatgttcga gccgtttttc agtgcaatgt
    15001 gcatgtcagc aatgcgcgcg gtttcaattt tgcgcggatc gcagacgata attttcgccc
    15061 cgttacgttt agcgttaatt acgtgattcg ccatgattgg gtgggaatcc gccgggttgt
    15121 acccgaaaac gaacactaaa tcggtattat caatttcgtt aatagcattg ctcattgcgc
    15181 cattaccgac cgattggtgc agacctgcaa ccgatgggcc gtgtcagaca cgagcgcagc
    15241 agtcaacgtt attggtacca ataacggcgc gcgcaaattt ttgcattaca tagttggttt
    15301 cgttacccgt accacgcgag gagccggtcg tctggatggc atccggaccg tacttctctt
    15361 tgatggcgct caggcgctcg gcaacgtaat tcagtgcctc atcccaggaa acaggttcga
    15421 gtttgccgcc acgctggcga cggatcatgg gggttttcag gcgcggggtc aggatctggg
    15481 tatcgttaat gaagtcccag ccataataac ccttcagaca cagggtaccc tggttggttt
    15541 tcccctgcgc tgcctccgcc cggacgattt tgccgttatc gacgaccagg ttgattttgc
    15601 aacctgatgc gcaatagggg caaaccgtga cgactttttt catcggtctc gctccagtta
    15661 atcaaatcac gcatacgcgc tctcgactac agtatgcatc ttttatgcca cattttattt
    15721 ggggtcattc cctgatatta cgggcactat ttattcaaaa ctctgacgaa aaacaggctg
    15781 tcgtcagttt tgacgtgacg aaacgaaata ccgcgtgaca gccatcacgc ggcagacatt
    15841 ttattttttc tcgacgacgg gagccgcctg atacccgccg cccagcgatt tcatcaactg
    15901 aatgctgtgg atcacccggc ggctgtccag catcagtaat gacatctctt cggcaagcac
    15961 tggcaaccgg gcttcggtgg cctgtaagcg gctggttaag ccgcgctgat aggcggcctc
    16021 ggcagcgcgc tgggtgaagc gcgttgcttc cacgcgttca gcctgcattt ctcgttcgtc
    16081 gttgagcgtt tgcagacgcg tgccgttgac ggcaacgtca cgcaccgcgt tcagtactga
    16141 ctggttgtaa cgttcaatca tcatgttgct ggcggcgcga gtgccttcga gattggcatt
    16201 caaccgtcca ccgtcaaaca gcggcaattt cagacccggg atgaagttga actggcgact
    16261 ggtttttttg aataaggtat ccaggtggat ggagtccaga ccgaaaaacg ctttgatatc
    16321 aaagctcggg tagaacagtg cccgcgcgga atccacctga tctaatgacg cctgaacata
    16381 ccagcgcatg gcttgcagat ccgggcgtct ggcgagcaac tcataagaga gtgtcgccgg
    16441 aatgccggtc tggactcgtg gtaatgccac cggtttgatc tccggcatat cgctggcccc
    16501 cgcgccaatc aatgcacgca gagattctcg cgtttcggtg atttgccctt tgacggcagc
    16561 aatttgttta tcgaccgcca gaatctgtgc ccgcgcgccg tggaaaggca cttgtgcttc
    16621 cagaccgtgc gccactttac tctggtgcgc tttcaccgcg taatcaatca catcgcgagt
    16681 ttgttctaac agatcgagca tctgatagct ggcctgcata ctgtaataaa gctgcgctat
    16741 gcccgtggtc agcgatagct ctactgctgc ggtttctgcc agcgcggcat tatgcgcgcc
    16801 aatggcggcg gcaaccgctg agcgatgcac accccacaaa tcaagatcca gtccggcaaa
    16861 caaacctact gtggcttccg tatagtacgg cccgtccata cccagtgagg gcgcatccat
    16921 cgcataaggg cttaaaaagc cgttcgccga gacgcgttgg cggttgagca tccctaacgc
    16981 tgcgacctgt aattgtgaac cggcatctaa caaatcggcc tgggactgcg ctttttcttc
    17041 ccgcagtttc gcttcggcga gggtgtgtga accacttagc gtccgttgga tcagcgcatc
    17101 cagctgcggg tcattgagtt gtttccacca ctgcgcctgc ggccagccgg agctggcaag
    17161 atgaatatcg tcggccagtt tgatttgttc cggtttgagc tgttgatgag gtgcagaatc
    17221 cttacgtacc agggcacagc cggaaatcag cgtcgtgctg ccgagaatgc tgcacaacag
    17281 cagacgtgaa agttgacgat tgatcattgc gtggctcctt gtgcctgttc cgtggcgggc
    17341 gttaatgccg gggctgtcca gtctggcaag cgggcgaaaa gctggcagac gtgttgctcc
    17401 tgttttaata aggtgggcag gatggcctgc gaggcgggtg tctcttcaag cgttatttga
    17461 ggagaacagc tgagtgcggt tgccagaccg gcagcgtatt tttccagggc gtcggcaaac
    17521 tgacctgctc tgtccggctg tagtgcgtta tccagcgcct gcgccgagtt ccaggtggca
    17581 tcccaggcgt gaagaagatc gcggccctga cgaataaccg tttgcgaacg ttcaatcagt
    17641 aaggcgcgtt cttcgctgtc cagttgacgc tccagcgcca cgcgttggca catctcttca
    17701 caggcattaa acgccgcatg cagacctata cgaatttgca gataagtgcg cagagccgtg
    17761 acttcctgct ggcgtgggat ccgcattact ttacttagca tacccagcgc accggctagt
    17821 ttttgcggca gagtgcgcgc ttcactttca ggccagacaa aggtgtaaat caccgcggac
    17881 accacggtac caatgatgat acccagggcg cgatcgcgaa tttccaccag gtcgtacact
    17941 gggccaaaaa cgttttcgag cgtggcgagc gcgaaggtga cgaccatctg tgtgccgata
    18001 taagaagagc gttcagagct ggtggcaatc catgcgccca acaggaaaat cggtgccagc
    18061 acaaacagca attcgacaat attgtccagc cagggcatga ccagtagcgt gaataacagc
    18121 gccagaatcg cgccgcaaaa ggccccgcca aaacgcagca ccatcttctg gtacgacgaa
    18181 ccgacatttg gattagcgac gatcacgcag gtcagcatac aggtgtgaat gccttcccag
    18241 tccacgccgc tgtaaaaggt gtaacagatc aaacaggcga gcaatgtttt taccgcgtag
    18301 cgtatatagt ctggattggt aaaagcatcg gcgaccattg atggcggttt ggcggcgggc
    18361 gttggcggcg tattcgggtt catctggccc agttgtaaca acgtctggca gatattctcc
    18421 aggttacatt cccgtgccgc caccgcttca ctttcactga tccgccagtc gctttgccag
    18481 cactgacctt cagcaacggc atgctgcagc ttgttgattt ctgaggctaa tttttgccga
    18541 aattcaataa ttgcctgaga atcagcaaaa gaggtgggat cgtagcgatt cagcgtcgag
    18601 taaatgtagg ttaccgttgc cacgcagctt tgccaccatg cgctttgagt tcgccagttg
    18661 gcatcgtccg cgagacaaaa gacattcagt ttttgcagcg ccagcgcctc tctttcaatc
    18721 cgcgtttcgg gtagcggtgc gaggctgtct gtcaggtgac taatggcatc atcaagccga
    18781 tcattaagcg cctgatgcat ttgcgaaatg gcacgactgg gaaaccacag cacgccgatt
    18841 aacgtcatca gcaaggttgg atagaggcca acaacgatac accacagcgt taagcgcacg
    18901 accacttccg gatagtcgag catggcgggg aaggtttgcc cgtaaatggc gacaatggcg
    18961 acagcgaaaa agaccagtcc cagccgatgg gtgcgcatca aaaacatgca gcccatcagg
    19021 atcggcccgg cgatgatcaa tcggatcaac ggttcgccgt atgaccattt gtagatcaaa
    19081 aacaggctgc cgatctccag caccgtggca accacaaaca agatcgccac aaatttggtg
    19141 taaaacgcgt tcgactgaat accgtaaaac agcactgcca gcgataacgc cacaaaaggg
    19201 atctcaaaag tcatcgagat cagaatcacc agcaggcagc ctacccagag ttgcacgatc
    19261 tgcggcacgc ggccgggtcg ccgctcgctt aactcttcat gaaagaacgc cagcagcctg
    19321 accaccggta atggcaggga gttgagcgcg ctcattattg cggctcaaga ttagcgactg
    19381 ccgaagcgcc gatgcggaac atttccgggt caggtttatc gaccatgatt ttgaccggaa
    19441 aacgctgggc aacgcggacc cagttaatag agcgagaaac tttcggcagg ccgcccagca
    19501 ccaggccgcc gtcattcggt agcacaccgt agccaatcga atccacttta ccctcgaagg
    19561 ttttgccgct gtcactcatc aggcgaatcg ttgcgggtgt acctgagcga atatttttca
    19621 gatcggtttc gcggaagttg gcgatcacgt accagtgacg agtgtcgatt agggtaaaaa
    19681 tagggcgcat ggcagaagca aattgcccga cggaggtttt gagggaaatg acccggccat
    19741 caaacggcgc gcgaacggtc gccatttcca gatgcagttt ggtcagggca atatccgctt
    19801 cgaccgccgc acgctgggca actaatacat ccacgccgct gacggcgctg gcggctgact
    19861 gcgcctgtaa caatacggca ttaagatccg cttctgcggc gcgctgcgcc gttcttgcac
    19921 ggtcaacatc ttccgctgag acaaaacctt ctttcagtaa tggctcggtg cggcgtaatg
    19981 tatctgtggc ctgtttcgcg gcggcacgtg ctttttctac cgtggcatta accgagtcgg
    20041 caccaaactg ttgggcgtca acgctacgct gggtgagcat aatttgctta tccagcgccg
    20101 cgagggaggc ttcagctttc gccagattgg cttcgtacgg gcgcgggtca atgcggaaca
    20161 gcaaatcgcc ctgtttgact gcctggttgt cggtgaccgc cagttctaca atgcggccgc
    20221 tgacttccgg caccacatca atggtatctg ctgacgcgta agcgtcatta gttgatggcg
    20281 cactgtctac gcgccagata acgaaaacaa gggcaaccag cgccaacgca accactaaca
    20341 gagcagggaa tttactgcga ggagcttttt tcggcgtact ttccatgagc gcgtctcaaa
    20401 tagattagaa aaatgccagc cagaacagca tggcgtagac agcaaaaagg gcggtataaa
    20461 taattccgac aaatgccaga ttgatatttg cccgctgaat aattcgcctc gtgattagcg
    20521 tcaaaataag gctggcaatg gcgcagaaaa accagctggg ataataagcg ccgatcaccg
    20581 ggattgccgg agataatgag catcccgaaa ccatgaagac gggaattatc caggctgttt
    20641 ttttgagttg catcgccatg cgagagagaa ctgttggcat attaaataca tcctgtttgc
    20701 tgcgaacaat atctgtagtg aatatcaata tccattgaag gcgtcagtat ggctattttc
    20761 ttgatgaata aaaatagctt tattcagcca ccgcattcat aacttatata ttttatgtgt
    20821 taattgattg tatgtatttt tataataaat gcttttgggg gcttaagcgc ccccaaaagt
    20881 gagtggcatt aatttggggt tacgatattc acccacaaat cgaaattatc cagacaggca
    20941 ataatttctt ccagtttcgc gccattgcca ataattttgg ctttcttcgc ttttaccaga
    21001 tccgccattt tggcttgtcc tgtcagcacg gcgtgcagat cttcacggct gatgtagaaa
    21061 gaggcgtcgg cttgcggttg cagtgtttta cggtagttaa gcacgctatc gttcagcgtc
    21121 aggttgaggt tatcgccgtt gctcatattg aagttcaggc tgatattttt acccgcagct
    21181 ttcgcgctat cgaggcgaac ggacataaag tcgaacagca tttcgaccga catcccgcga
    21241 atggtgtccg gggaaccggt ggtgccgtgg ctgaacttat gcaccccttc gcgcagctct
    21301 ttcgcgccgg tcaggtagaa accgcgccag gtggcggact cggcctgata gcccagctgt
    21361 tcaaagttat tcgcttgcag attcttcgcg acctggtcac ccgggttggc ggcaatcacc
    21421 tgtttcagca gttctgccga ccagcggtaa tcaccttgct tgttcgcttc ttgcgccagg
    21481 ctgatgacac gggcagaacc gcccagcgcc tgcacgtaac gtttacccat ctccacctga
    21541 ccatacggat gcaggttagc cgggttaccg tcgtaatagc caagatagaa gttatacacc
    21601 gcgcgggcgt tgtggctgac agaaccgtaa tagccacggc tggcccagtt attggcaagt
    21661 gcaggcggca gtttaatcat gtcgccgatt tcattcatgg tgtagccctg gttcgccagg
    21721 tgcagggtct ggtcgtgaat gtacttgata gtatcgcgat atttaccaat ataatcattg
    21781 atatgcttat tgccccggac cggccaggtg tgcggcataa acaggacttc cgcgtcgtta
    21841 ccccacatat ccagcgtttc gttcagatac tcggtccact tgctggtgtc gcgggttttc
    21901 gcgccgcgca gagtgtagaa gttgtgcagg gtatgcgtgg cgttctcggc ggtacacagc
    21961 gctttcaggg ccggaatata gaagtgcatt tcggctggtg cttcgctacc tggggtcatc
    22021 aggaagtcaa actccaggcc gtcgataatc atcttctcac cggttttggt gatggttttg
    22081 ttcggtgcga tgatgctcgg gtagcccgat gccagcgtta cgccaagacc attgccgatg
    22141 ttaccctgag ggttatgcgc cagcagcagg ccgtaggagt aaagtgcacg gtggctcata
    22201 atattacccg ccagtacgtt ttcgctgatg gcttcgtcca taaagccagc aggggcgata
    22261 acctgcactt taccggattt cacatcagct tcagagataa tgcctttcac gccgccatag
    22321 tggtcggtat ggctgtgggt ataaataacc gcaacaatcg gtttttgcgg gcgattttgg
    22381 aagtaaaggt caagggcggc ttttgcgctc ggtggcgtca ccagcgggtc gatgacaata
    22441 atcccggtat caccttcgat aaaggtgatg ttggagatat cctgaccgcg aacctggtac
    22501 attctgtcgg tgactttaaa caggccggaa ataccgttta actgcgactg acgccacagg
    22561 ctagggttaa cggtttcggg cgcgggcgca ttgatatcaa atttataatc ttccccg
//
LOCUS       DADKRT010000054        22583 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.054, whole genome shotgun sequence.
ACCESSION   DADKRT010000054 DADKRT010000000
VERSION     DADKRT010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22583
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.054"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..257)
                     /locus_tag="JQ356_001765"
     CDS             complement(<1..257)
                     /locus_tag="JQ356_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY4621885.1"
                     /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
                     LALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDC"
     gene            complement(248..718)
                     /locus_tag="JQ356_001766"
     CDS             complement(248..718)
                     /locus_tag="JQ356_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY4621886.1"
                     /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
                     QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
                     EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL"
     gene            complement(903..1697)
                     /gene="thyA"
                     /locus_tag="JQ356_001767"
     CDS             complement(903..1697)
                     /gene="thyA"
                     /locus_tag="JQ356_001767"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HAY4621887.1"
                     /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
                     QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYAPHPGIKAPVAI"
     gene            complement(1704..2579)
                     /gene="lgt"
                     /locus_tag="JQ356_001768"
     CDS             complement(1704..2579)
                     /gene="lgt"
                     /locus_tag="JQ356_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HAY4621888.1"
                     /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
                     HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
                     PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
                     MMVWAYRRSPQQHVS"
     gene            complement(2730..4976)
                     /gene="ptsP"
                     /locus_tag="JQ356_001769"
     CDS             complement(2730..4976)
                     /gene="ptsP"
                     /locus_tag="JQ356_001769"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY4621889.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
                     ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
                     EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
                     LAELPQDRLVGVVVRDGAANSHAAIMVRALGLPTVMGADIQPSVLHRRTLIVDGYRGE
                     LLVDPEPILLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
                     LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
                     PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
                     EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
                     YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
                     GLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLEAQLATEVRHQVVAFMERRGM
                     GGLIRGGL"
     gene            complement(4989..5519)
                     /gene="rppH"
                     /locus_tag="JQ356_001770"
     CDS             complement(4989..5519)
                     /gene="rppH"
                     /locus_tag="JQ356_001770"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HAY4621890.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
                     NTPKPQNTSAYRRKRG"
     gene            6204..6893
                     /gene="mutH"
                     /locus_tag="JQ356_001771"
     CDS             6204..6893
                     /gene="mutH"
                     /locus_tag="JQ356_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HAY4621891.1"
                     /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWTPNEEEDRQLREDWEE
                     LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
                     SALLARHFLIQ"
     gene            6962..7675
                     /locus_tag="JQ356_001772"
     CDS             6962..7675
                     /locus_tag="JQ356_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY4621892.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
                     FFSIAVESLNLIRNKKNPL"
     gene            7813..8031
                     /gene="ygdR"
                     /locus_tag="JQ356_001773"
     CDS             7813..8031
                     /gene="ygdR"
                     /locus_tag="JQ356_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YgdR"
                     /protein_id="HAY4621893.1"
                     /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
                     DTGLVSYHDQQGNAMQINRDDVSQIIER"
     gene            8139..9179
                     /locus_tag="JQ356_001774"
     CDS             8139..9179
                     /locus_tag="JQ356_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HAY4621894.1"
                     /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
                     NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
                     QALDRKNIREALHDSLKRLQTDYLNLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
                     LDALAEYQRAGKIRYIGVSNETAFGGMRYLHLADKHDLPSIVTIQTPYSLLNRSFEVG
                     LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKTAGARNTLFSRFTRYSGEQTQKAVAA
                     YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
                     EAVHQVYTYPAP"
     gene            complement(9211..10404)
                     /gene="lplT"
                     /locus_tag="JQ356_001775"
     CDS             complement(9211..10404)
                     /gene="lplT"
                     /locus_tag="JQ356_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HAY4621895.1"
                     /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
                     FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
                     WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
                     RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKL
                     VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG
                     KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWI
                     WQRRH"
     gene            complement(10397..12556)
                     /gene="aas"
                     /locus_tag="JQ356_001776"
     CDS             complement(10397..12556)
                     /gene="aas"
                     /locus_tag="JQ356_001776"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HAY4621896.1"
                     /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
                     LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
                     FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
                     TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
                     AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
                     ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTLDKLQQYAREHGVPEL
                     AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
     gene            12945..13976
                     /gene="galR"
                     /locus_tag="JQ356_001777"
     CDS             12945..13976
                     /gene="galR"
                     /locus_tag="JQ356_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HAY4621897.1"
                     /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
                     YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
                     RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
                     PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
                     VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
                     EASHHATSD"
     gene            complement(13983..15245)
                     /gene="lysA"
                     /locus_tag="JQ356_001778"
     CDS             complement(13983..15245)
                     /gene="lysA"
                     /locus_tag="JQ356_001778"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HAY4621898.1"
                     /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
                     QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
                     VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
                     LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
                     SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
                     TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRSLL
                     PEVLFDNGQARLIRRRQTIEELLALELL"
     gene            15367..16302
                     /gene="lysR"
                     /locus_tag="JQ356_001779"
     CDS             15367..16302
                     /gene="lysR"
                     /locus_tag="JQ356_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator LysR"
                     /protein_id="HAY4621899.1"
                     /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
                     VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
                     TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
                     RMIVETHSAASICAMVRAGVGVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
                     RPSSALVQAFSEHLQAGLPKLVTSLDAILSSATTA"
     gene            complement(16289..16981)
                     /gene="ygeA"
                     /locus_tag="JQ356_001780"
     CDS             complement(16289..16981)
                     /gene="ygeA"
                     /locus_tag="JQ356_001780"
                     /EC_number="5.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HAY4621900.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD
                     FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
                     HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
                     IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
                     IHAEDAVAFMLS"
     gene            complement(17110..18525)
                     /locus_tag="JQ356_001781"
                     /pseudo
     CDS             complement(17110..18525)
                     /locus_tag="JQ356_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311725.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
     gene            complement(18840..19601)
                     /gene="kduD"
                     /locus_tag="JQ356_001782"
     CDS             complement(18840..19601)
                     /gene="kduD"
                     /locus_tag="JQ356_001782"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HAY4621901.1"
                     /translation="MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE
                     PTETIEQVTALGRRFLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDAL
                     EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA
                     SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
                     GLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR"
     gene            complement(19631..20467)
                     /gene="kduI"
                     /locus_tag="JQ356_001783"
     CDS             complement(19631..20467)
                     /gene="kduI"
                     /locus_tag="JQ356_001783"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HAY4621902.1"
                     /translation="MDVRQSIHSAHAKTLDTQGLHNEFLVEKVFVADEYTMVYSHIDR
                     IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
                     ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
                     RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
                     MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD
                     LR"
     gene            complement(20754..21935)
                     /locus_tag="JQ356_001784"
     CDS             complement(20754..21935)
                     /locus_tag="JQ356_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708633.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HAY4621903.1"
                     /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
                     AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQ
                     PCTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
                     AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
                     RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
                     E"
     gene            22190..>22583
                     /locus_tag="JQ356_001785"
     CDS             22190..>22583
                     /locus_tag="JQ356_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621904.1"
                     /translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA
                     LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL
                     IYAVAITNSLTEQLAKHMVIDLRIRMLVS"
BASE COUNT         5794 a         6050 c         5437 g         5302 t
ORIGIN      
        1 atacagtcac cctgtccgac aatttccagc ccttcgccgg tacagatgcc atgacaataa
       61 cccgccctct ggagatgctt cgcgacggta aatacccgca gccagatttc atcttccagc
      121 gccagcttac gggtgctcgt taaactttca cgctgtaacg caggcagaaa gcgtgcagcc
      181 cccagcaaca atacgctact gatcgccata gcaatcaaca cttccagcag agaaaaacct
      241 tgctctttta caggcatcct tctgtttctc cttgctgaca aagccggagt cttccccacg
      301 gcgaaaccac cagccaccac tcgcccgttg agtttttgaa gcgaatatgc ccggcccatg
      361 cggtattgcg caggccaaag aaagcaagcg aaggtgtcag gtcgctcatt tcgacttcgg
      421 gccagcgtgg cacaaagacc aatggtgaac tgccatgaca ggtattggcc ccagcagcgg
      481 aactcacaag gcaccataac gtcccctccc tgataacgct gatactgtgg tcgcggttat
      541 gccagttggc atcttcacgt aaatagagca aatagtcccg cgcctggctg gcggtttgcc
      601 atagccgttg cgactgctgc cagtattgcc agccatagag tccacttgcg cttagcatga
      661 ccaaaatcag catcgcgacc agcgtttcaa tcagcgtata accacgttgt gttttcatgc
      721 cggcagtatg gagcgaggag aaaaaaagac gagggccagt ttctatttct tcggcgcatc
      781 ttccggacta tttacgccgt tgcaggacgt tgcaaaattt cgggaaggtg tctcgaagaa
      841 tttaatggag ggtaaaaaaa accgacgcac actagcgtcg gctctggcag gatgtttcgt
      901 aattagatag ccaccggcgc tttaatgccc ggatgcggag cgtagccttc aatctcaaaa
      961 tcttcgaaac ggtagtcgaa gatggattcg ggtttacgtt tgataatcaa cttcggcagc
     1021 ggacgcggtt cgcggcttaa ttgcagatga gtttgatcca tatgattgct gtacaggtgc
     1081 gtgtcgcccc ccgtccagac aaaatcgccc acttccagat cacactgctg cgccatcata
     1141 tgcaccagta acgcgtagct ggcaatgtta aacggcaggc cgaggaaaac gtcacaggag
     1201 cgctgataaa gctggcaaga gagtttgccg tctgccacat agaactggaa gaacgcatgg
     1261 cacggtgcca gcgccatttt atccagttcg cctacgttcc acgctgaaac aataatgcgg
     1321 cgcgaatccg ggtcgttttt cagctggttc agtaccgtag tgatctggtc aatatgacga
     1381 ccatccggcg ttggccaggc gcgccactgt ttaccataca ctggcccgag gtcgccgttt
     1441 tcatcggccc attcgtccca gatggtgaca ttgttttcgt gtagataagc aatgttagtg
     1501 tcgccctgca gaaaccacag cagttcatgg atgatggaac gcaggtggca acgtttagtt
     1561 gtcaccagcg ggaatccatc ctgcaggtta aaacgcatct gatgaccaaa aatggaaagc
     1621 gttccggttc cggtacggtc gtttttctgt gtgccttcgt cgagcacttt ttgcatcagt
     1681 tctaaatact gtttcatggt tcctcaggaa acgtgttgct gtgggctgcg acgatatgcc
     1741 cagaccatca tgatcacacc cgcgacaatc atcgggatgg aaagaatttg tcccatgctg
     1801 atgtactgca cccaggcacc agtaaactgc gcgtcgggct ggcggaaaaa ctcaacaatg
     1861 atgcgaaacg cgccgtaacc aatcaggaac aaacctgaga cagctcccat tgggcgcggt
     1921 ttacgaatat acaggttgag gataataaac agcactacac cttccagcaa cagctcgtaa
     1981 agctgtgatg ggtggcgcgg cagcacaccg taagtatcga aaatggattg ccactgcggg
     2041 ttggtttgca gcagcaaaat atcttctgta cgggagccag ggaacagcat ggcaaacggg
     2101 aagttcgggt caacgcggcc ccacaattca ccgttaataa agttgcccag acgcccggca
     2161 ccaagaccaa acggaatgag tggtgcgata aaatcagaga cctggaagaa ggaacgttta
     2221 gtacggcggg cgaagataat catcaccacg ataacgccaa tcaggccgcc gtggaaggac
     2281 atgccgccgt cccagacacg gaacagatac agcggatcgg ccataaactg cgggaagttg
     2341 tagaacagaa cataaccaat acgtccaccg aggaagacgc cgaggaagcc cgcatagagt
     2401 aagttttcaa cttcattttt ggtccagcca ctgcccggac gattcgcccg acgtgttgcc
     2461 agccacattg caaaaatgaa acccaccaga tacatcaggc cgtaccagtg aagcgccacg
     2521 ggtcctattg agaaaatgac cggatcaaac tccggaaaat gcagatagct actggtcatc
     2581 tgtcaccaca agttcttgtt atttcgctga aagagaacag cgattgaaat gcgcgccgca
     2641 ggtttcaggc gctccaaagg tgcgaataat agcacaaggg gacctggctg gttgccggat
     2701 accgttaaaa gatatgtata tgatccgcgc tataaccctc cgcgaatcag cccgcccatg
     2761 ccgcgacgct ccataaaggc tacaacctga tgacgaactt cggtcgccag ttgcgcttcc
     2821 agactacgct gcgcaagatt ttctgcttcg gcaaaatcaa tgcgccgcag caggtatttt
     2881 acccgcgcta cagaacgtcc gttcatagac agatggcgat acccaagccc aatgaggatt
     2941 gccacgcaca tgggatcgcc cgccatttca ccgcacaaac ggagatcgat accatgtatt
     3001 tccgcttccc gggcgatcat tgccagagct cgtaacattg caggatgaag gctgtcataa
     3061 atgttcgcca cccgggtatt gttgcgatca acggccagaa tgtattgagt cagatcgttg
     3121 gtgccaacag agatgaaatc gacccgcttt gccagatgcg gcagcataaa taccattgac
     3181 ggtacttcca gcatgatgcc gatacgtggt ttgggaattt cgtaaccgat catctcctcg
     3241 acttcacgtc cggcacgttc aatcaggcgg cgtgcttcgt caacttcatc gaggctggta
     3301 accatcggca acagaatatt caggttgccc gtagcggcat tagcacgcag catcgcccgc
     3361 acctggatca agaagatctc cggctgatcg agcgtaatgc gaatcccacg ccaacccagg
     3421 catggattct cttcgctgat cggcatgtaa ggcagctgct tatctgctcc gacatccagc
     3481 gtacgcaagg tgacgggttt atcattgaac atttgcagca tcccctgata ctgcgccacc
     3541 tgttcttctt ccgacgggaa accactttgc agcatgaatg ggatttcagt gcgataaaga
     3601 ccgatgccat caatacggct gcccagtttt tcttcatgtt ccgggcttaa accagcattg
     3661 agcatgactt ttatacgctc accgcttttt aactgcgcgg gtaaattgac gtcatcttcc
     3721 gccagacggc taagctcaat ctcttcacta attagccgct gatattcttg cagcagtatc
     3781 ggctccggat cgaccagcaa ttcaccgcga tagccatcaa cgatcagcgt cctacgatgc
     3841 agcaccgaag gctgaatatc cgcgcccatc acggtaggga gccccagcgc acgtaccatg
     3901 atcgcagcat gggagttggc tgcgccatct cgcacgacaa caccgactaa gcgatcctgg
     3961 ggcagctcag caagagttgt cgctgacagt tcatctgcca ccagaatgaa acgttccggc
     4021 caggcgttcg gcccttgatt agcgtcatca agatgaaaca gcaatcgctg acccagcgca
     4081 cgtaaatcgc cagcccgctc tttgagatag ttatcgctta gcgcggcaaa ctgttcggca
     4141 aatttttcaa tgaccgtttt taccgcccac tctgccaccg agcctttatc aacctcggca
     4201 aacaattcgc gacgcagccg ggtgtccgaa agcaggtgcg agtaaagatc gaaaatagcc
     4261 gccgtttctt tttgtgctcc ggcggcaaag cgtttgctgt agcggcgaaa ctcgtttgcc
     4321 gcttcttcca gcgccccggt caatcgttcg cgttccagag ccggatccag cgttgatgcc
     4381 tgatacacct gttccattaa aggtaacgtg gcatcctgcc agccttcggc aatcgccaca
     4441 ccaggtgctg ccggtaatgc gcggattcgc gtctggcgat attgcccaaa caaggcagtc
     4501 aactgcgact gagaaagaat agctgccatc tgggtggcaa gcgtcaccag gaaggattct
     4561 tcactttcgt catactggcg caactctcgt tgctgtacca ccagtacacc aagcaactgg
     4621 cgacgttgaa taattggtac gcctaaaaac gcgcggaaac gttcttcttt tacggagggg
     4681 atgtatttga agctggggtg cttttgcgca tctgcaaggt ttatcggttc cgccagcctg
     4741 ccaaccaggc cgacgatccc ttcatcaaac gcgagcgtta cagtgcgacc gcgtggtttt
     4801 ttcagccccc gggtcgccat caggtagtaa caacgtcgat catgatcggc caggtagacc
     4861 gaacagacct cggtatccat cgcaagacag atgtcggtaa ccagaatatt taacgcctca
     4921 ttcaggcgtg gtgcgctggc taccttttcg actatttcgc gcaggcgagt gagcataatt
     4981 ggcgtgactt aacctctttt acgtcgataa gcagatgtgt tttgtggttt tggcgtattt
     5041 tcctgcagtg acatcaccac actcgcgaac tctttcatta ccctacggta gacatcacgt
     5101 ttaaatgaca ccacctgtct gaccggatac cagtaactta cccatcgcca gccgtcaaac
     5161 tctggtgtac tgctggtttg catattgatt tctgcatcgc cgctcaccag ctgcaagaga
     5221 aaccattttt gtttttggcc gatacaaacc ggcttcgtgt cccaacgcac caaacgtttc
     5281 ggtaatttgt agcgcaacca gttacgcgtt gaagcaagga ttcgaacgtc tttgcggctt
     5341 aatcctactt cttcaaacaa ttcacggtac atcgcctgct ctgcggattc tccggggttg
     5401 attccgcctt gcggaaattg ccaggagtgc tgaccaaatc gccgggccca cattacctgc
     5461 ccctggcgat tacaaatcac gatacctacg tttgggcggt agccatcgtc atcaatcacc
     5521 ggactacctc aaaataaagc tttatatacg aatgattgtt tcatactcca ggaagacggt
     5581 aaaccactct ctgcagggca ttacacacta ataacaattg aataactcac agttatgtgc
     5641 agagttataa acagaggaag gggtggatag ccgtttttat tcaccttttc tgtggataga
     5701 gttgtgaaga actacggaat tactacggga aaacccggag cattctgaat aagcccgata
     5761 taggcatttt aaaatattca ttataagtca atgcattaca tgtaatttga gtaatgaaaa
     5821 agagtaattc gtgacccagg tcacacctct catttacggg ttggcgaaag atcaaccaat
     5881 gccgtattta tccacagaat gtgccactaa gttaagcact gaaccactaa aaactggagt
     5941 ttcgtcgcac gtcaaggctg taaatggaaa cagtagtgga ggtttttcac agttatccca
     6001 gctttctgtg gataacatgg tgtaagatcc tgtttatttt cagtgaccag atttggaaaa
     6061 cctattgcag tgctgcgcaa ctcgattatc ggcagcctaa aaagcaatat aaatcagaga
     6121 attgaacaac acatgtggaa aaagttacac tgcgaatatt cggtacataa ttgctgtttg
     6181 ttttttaacc aaggtatcat gacatgtccc aacctcgccc actgctctct cctcccgaaa
     6241 ctgaagaaca gttgttagcg caagcacagc aactttctgg ttatacattg ggagaactgg
     6301 cggcacttgc cgggctggtt acgccagaga atttaaaacg cgataagggc tggattggcg
     6361 tgttactgga gatctggcta ggtgccagcg cagggagtaa acctgagcaa gattttgctg
     6421 ctctgggcgt ggaacttaaa actatccctg tggatagtct tggtcgtccg ctggaaacaa
     6481 cattcgtttg tgttgccccg ttaacgggta atagcggggt gacctgggaa accagccacg
     6541 tgcgccacaa gctcaaacgc gtactgtgga taccggttga aggcgagcgc agcatcccgc
     6601 tggcgcagcg tcgcgtagga tccccgttgc tgtggacccc gaatgaagag gaagaccgac
     6661 agctacgcga agactgggaa gaattaatgg atatgattgt tctcggtcag gttgagcgga
     6721 tcaccgctcg tcacggggaa tatttacaga taagaccgaa agcagcgaat gcgaaagcgc
     6781 ttaccgaagc cattggtgcc cggggcgaac ggattctgac gctgccacgc ggcttttatt
     6841 tgaagaagaa tttcaccagt gcactactgg cccgtcattt tctgatccag tagccatcgc
     6901 tttgacctgc cgctttccgg gcatataatt accgcttcat ttttttggca gggcttttta
     6961 gatgttattt gcatggataa ccgatcctaa cgcctggctt gcgctcggta cgctgacgct
     7021 gctggagatc gttcttggga tcgacaatat tattttcctt tctctggtgg tggcaaagct
     7081 tcccacagca caacgtgctc atgcgcgccg tctggggttg gcgggagcca tggttatgcg
     7141 tctggcgctg ctggcatcaa tcgcctgggt tacgcgcctg acaaatccgc tttttacaat
     7201 attcagtcag gaaatttctg cccgtgattt gattctgctt ctgggtggct tgttccttat
     7261 ctggaaagcc agcaaggaaa tccacgaatc cattgaaggt gaagaagaag ggctgaaaac
     7321 acgcgtttca tcattcctcg gcgctatcgt gcagattatg ctgctggata ttatctttag
     7381 cctcgactcg gtgattacgg ctgtgggtct gtcagatcac ctgtttatta tgatggcagc
     7441 cgtggtgatt gccgtaggcg tgatgatgtt cgccgcgcgc tcgattggtg attttgtcga
     7501 acgccatcct tcggtaaaaa tgctggcgct ctctttcctg attctggtgg gctttaccct
     7561 gattctggaa agtttcgaca tccacgtacc gaaaggttac atctacttcg cgatgttctt
     7621 ctctattgcg gttgaaagcc tcaacttgat tcgcaacaaa aagaatccgc tctgatactc
     7681 cgtacgctct cctgcgggag ggcgtactca ctccttttac cctcacagtt taagattttc
     7741 ctgctttcaa gatatataac gtcgttttat aaacagacta ttatcatagg taggccaaat
     7801 gaggataacc ggatgaaaaa atgggcagta ataatttctg cagtcggact ggcgtttgct
     7861 gtttccgggt gttccagtga ttacgtcatg gcgaccaaag atggccgtat gattttgacc
     7921 gatggaaaac ctgaaattga tgatgatacc gggctggtga gttatcacga tcagcaaggt
     7981 aacgcgatgc aaattaaccg tgatgatgtt tcgcaaatta ttgaacgtta acaaataagg
     8041 tcagcatccg gctggcctta agatttttct ctttcccttt tcccttccct ctgccatttt
     8101 tatattcctt atgtcgtgat tataaaaagg aaacggctat gcaatatcac cgtatacccc
     8161 acagttcgct ggaagtcagc acgctggggc ttggcacgat gacgtttggt gaacagaaca
     8221 gcgaagccga cgcccacgca caactcgact atgccgtcgc tcagggcatt aaccttatcg
     8281 acgttgccga aatgtaccca gtacctccgc gccccgaaac gcaagggtta accgaaacct
     8341 acgtcggcaa ctggctggcg aaacatggca gccgcgaaaa gttaattatc gcctccaaag
     8401 tgagcggacc gtcgcgcaat aatgacaagg gcatccgccc ggatcaggcg ctggatcgga
     8461 agaatatccg cgaagcgctg catgacagcc tcaagcgcct acagactgat tacctcaatc
     8521 tttatcaggt gcactggccg cagcgcccga ccaactgctt cggcaaactc ggttatagct
     8581 ggacggattc tgcgcctgcg gtttcgctgc tggatacgct ggacgcactg gcagagtacc
     8641 aacgcgcggg aaaaattcgt tatatcggcg tgtcgaacga aactgcattt ggcggaatgc
     8701 gctacctgca tctggcggac aaacacgatc tgccgagtat tgtcaccatt cagacccctt
     8761 acagtctgtt aaaccgcagt tttgaagtag gtctggcaga agtcagccag tatgaagggg
     8821 tcgaactgct ggcctattca tgcctgggtt tcggcacgct gaccgggaaa tatctcaatg
     8881 gtgcaaaaac cgctggcgca cgtaatacgc tctttagtcg gttcacccgc tatagcggtg
     8941 agcaaacgca aaaagccgtc gcggcgtatg ttgatatcgc cagacgtcat ggcctggacc
     9001 ctgctcagat ggcgctcgcg tttgtacgcc gtcaaccgtt tgttgccagc actctgctgg
     9061 gcgcaaccac gatggatcag ctgaaaacta acatcgaaag tttgcatctg gagttaagcg
     9121 aagacgtatt agctgaaatt gaagcggtgc atcaggttta tacttatccg gcaccataag
     9181 attaacgccg gttaaaaccg gcgttaaata ttaatgacgg cgctgccaga tccacagcgc
     9241 cgttattgcc agcgcaaaca gcgcaccgaa gccaatgcca atgggcacga ccgggatgcc
     9301 taccattacc gccagcgagt aaatgcccag catcaacaac atggcgctgt tttcgccaag
     9361 gttttgtact gcaatcgcat tccccgcccc gacgcttttt ttaccccgct cctgtagcaa
     9421 cgcattgagc ggaacgacaa aaaagccccc catcacgcca atcagcatca acaaggcata
     9481 ggctggcagc agctcgtgtt gcagggaaaa aatcagtacc accacgccaa tcaaaatccc
     9541 ggctggcata cagcgtgaca cggtttccag cgtaactaac ttcgctgccg cacctgcgcc
     9601 aaccacgata ccaatcgcta ccatcgcgtt gagataggtg ggcgtagcgt tatcggtaat
     9661 gcccagcgcc accggtaccc acagcaccaa caggaaacgc agcgtgacac ccgctcccca
     9721 gaataaactg gtgcccacca gcgaaaaacg cgtttcacca ttgcgccata gcgaggtgca
     9781 ggcattcagg aaactgcggg tcatgttgat gagattccaa gactgccccg gacgcgccgc
     9841 cgccagtttg ggaatgtaga tattggcaac gaccgcacca ccgtaggcca gtgcgcatgc
     9901 ggccagggcg acgaggacat gccagtcagc cagcacacca ccggctacgg aaccgagcaa
     9961 aatcgccgct atggtagaag cttccattaa accgttagct ttcactaact tactacccgt
    10021 ggttaattcg ccgagaatac cgtatttcgc cggtgaatag gctgcagcac caacccccac
    10081 cagcgtatag ccgagaaacg gattgatacc aaagcagata ctggctgcgc ccagcagctt
    10141 caggccgttg gcaaacatca tcacccggcc tttggcgaag ctatccgcca cctgcccgac
    10201 aaacggcgca aaaagaatgt aagcacctac aaacaccatt tgcaggatgg gctggctcca
    10261 ctccggatag aactgcgctt tcagtaacgc cagagtggca aacagtaggg cattatcgcc
    10321 aaacgcagag agaaactgcg ccacgataac cgctttcatc cccttcgacc acaacgaagt
    10381 gttagtgtgc actgactcac tcatcgtgtt gttccgcttc gtctacccag cttttcaacg
    10441 tgacaaagtc aggtttgccg ctgccaagta atggcatctg tttcagatag cgaatatcgc
    10501 gcggtacagc aagctccggc acgccgtgct cgcgggcata ctgttgcaac ttatcgagcg
    10561 tcagttcgtt atctgtggtg aaaagcacca gtgcctcgcc tttgctggca tcgctcttaa
    10621 tcgcagtggc atggacttta tctggcgaaa caccaagtgc cagttgttcc accatttcca
    10681 gcgacaccat ttcgcctgca attttggcaa agcgttttgc gcggccctga atctgcacaa
    10741 agccctgctc gtcaaaacgc acaatatcgc cagtgtcata ccagccgcgc tccatttcgc
    10801 cgcgaacatt ctcggcggtg ggcacttcca gtacacctgg cttctccacc cgcagatagc
    10861 cgttcattat gttcggccct ttcagttgca ggcgtccgcc ctcttcgata ccaggaaccg
    10921 acaacaggcg cgcatccatt cctggtagaa tacgccctac cgtaccgggt ttcgccgcca
    10981 tcggtacgtt gatagaaacg acaggcgcgc actcggttac accatagcct tcaaggatgc
    11041 gcaggccaaa tttatcctgc caaagctgtt tggtactttc ttgtagtttt tctgcgcctg
    11101 ccaccacata gcgtagacga tagaagtcat acgggttggc gaaacgcgcg tagtgaccga
    11161 ggaaagtcga ggtaccgaac aacacggtgc aactgcggtc atacaccaac tccggcacaa
    11221 tgcggtaatg cagcgggctt ggataaagga acacttctgc acctgtaagc agtggcgtaa
    11281 acaggcctac cgtcagccca aaggagtgaa acagcggtaa tgccgacata aagcgatcgt
    11341 tggtggtgaa gtcggcaatc gttttaatct gctcgacgtt cgccagaatg cttttatggc
    11401 tatggacgac gccttttgga tggccttcag aaccggaggt aaagaggatc agcgcctctt
    11461 cttccggctg ctgttttacc tgcgccaggc gcggcatcag caaatgagcg aagatccata
    11521 ctttgtcggc agtggtgaca tctgctttta aatcttccag atagacccag cgcacctgag
    11581 taagttgctc cggcagatgc cagagtttgc ctttatcgag aaactggcgg gaagtgaaga
    11641 tggttttgat ttcagccgcc gtaatagcac tggtcagccc ttttacccca gcagtgtagt
    11701 tcatcattgc gggaatgcgg cgacgcgcga tggccccaaa aatcactgcc gcactgatgc
    11761 ctgcattggg cagcattaag ccgatgcgtt cgccttcaac actgtatttt tcaaggatgc
    11821 gtccaacaaa cagcgttttc gtaagcaatt tgcgatagga gtctggggta aagttgacgt
    11881 cttcgacaca tttcttcccg gctccgaagc ggtacattgc actcagtaaa gattcgtaca
    11941 gagtttcacg cgggcgcacc gccatacgcg cttccatcat tatttgatgc agcatttcgc
    12001 cagcgatttt gcgacggtca cgggcacgcg acgcatccgg catcgccacc tgcgttggag
    12061 gcaaaatatg cagagtaatt tgcgggaaca agcgacgttt aaccagacct ttcaggcggc
    12121 tgaagtgcgt aagttccgcc ccttcaatac gcacaggaat aaccgttgca ccagacttcg
    12181 ccgcgacaaa acccgcgcca tcgtagattt tcatcagcga gcctgtagtg gtgatgcgtc
    12241 cttcagggaa aatcaccact ggtcggccct gttccaccag acgtaccaga tgtttaatag
    12301 ccataggttg cgtcgggtcg agaggaacaa agtcgataaa tgatttcagc caacgcatat
    12361 accactgttg gcttattgag gtgtaaacgg caaacactgg acgcacaggt aaaaacagtc
    12421 caagcaaaat gccatcaata aaagagacgt gattaggcgt aattagaacg cgctcgccct
    12481 tcagtgcctg ggtgtcaccc gtaacgcgaa cgcgatacaa aacacggcac aaatttcgaa
    12541 aaaagctaaa aagcattcca actccctttg ctctgattca gtaaaagcga atggagggag
    12601 attacacgag ataaagaacg cgagcgacag taaattaggt gcgaaaaaaa acctgcgcat
    12661 ccgcgcaggt tggtgcaaga gacagggtac gaagagcgta ccgaataatc tcaccaatca
    12721 atacctctgg gatcaccact ttagcaacct gaagccaaac gccaccagcg gtcaatcgca
    12781 acagcgtttc gcaaagtgta accaaaggtt tgcaatctct ttttttgtct tacttatttg
    12841 cgtttggctc acattcccac gatgaaaaca cgccactcct tgaaccaacg ggcgttttcc
    12901 gtaacactga aagaatgtaa gcgtttaccc actaaggtat tttcatggcg accataaagg
    12961 atgtagcccg actggcaggc gtttcagtcg ccaccgtttc ccgcgtcatt aataattcac
    13021 ccaaagccag cgaagcttcc cggctggctg tgcatagtgc aatggagtct cttagctatc
    13081 acccgaacgc caacgcccgt gcgctggcgc agcagaccac tgaaacggtc ggtctgatcg
    13141 ttggtgatgt ttccgatccg tttttcggtg caatggtgaa agcggtcgaa caggtggctt
    13201 atcacaccgg taatttctta ttgattggca acggttacca caacgaacaa aaagagcgtc
    13261 aggctattga gcaactgatc cgccatcgct gtgctgcgtt ggtcgtccat gccaaaatga
    13321 tcccggatgc cgatttagcc tcattaatga aacaaatgcc cggtatggtg ctgatcaacc
    13381 gtatcctgcc tggctttgaa aaccgttgta ttgctcttga cgatcgttac ggtgcctggc
    13441 tggcaacgcg tcatttaatt cagcaaggtc atacccgcat tggttatctg tgctctaacc
    13501 actctatttc tgacgccgaa gatcgtctgc aagggtatta cgatgccctt gctgaaagtg
    13561 gtattgcggc caatgaccgg ctggtgacat ttggcgaacc agacgaaagc ggcggcgaac
    13621 aggcaatgac cgagcttttg ggacgaggaa gaaatttcac tgcggtagcc tgttataacg
    13681 attcaatggc ggcgggtgcg atgggcgttc tcaatgataa tggtattgat gtaccgggtg
    13741 agatttcgtt aattggcttt gatgatgtgc tggtgtcacg ctatgtgcgt ccgcgcctga
    13801 ccaccgtgcg ttacccaatc gtgacgatgg cgacccaggc tgccgaactg gctttggcgc
    13861 tggcggataa tcgccctctc ccggaaatca ctaatgtctt tagtccgacg ctggtacgtc
    13921 gtcattcagt gtcaactccg tcgctggagg caagtcatca tgcaaccagc gactaaccgc
    13981 agttaaagca attccagcgc cagtaattct tcgatggtct ggcgacggcg aatcaaccgc
    14041 gcctgaccat tatcaaacag aacttctggt aacagcgaac ggctattgta gttggatgac
    14101 attgatgcgc catatgcccc tgtatcatgc agtaccagat aatcacctgc cttcacttcc
    14161 ggcaaggcgc gggtttcaac atttccccct tcctgctggg taaagacatc gcccgattca
    14221 cataacggtc cggcgacgac ggtttccacc gttggcgcgt gttccagaga acgaccatca
    14281 gctgccaggg cactgatatg gtggtaacta ccgtacattg ccgggcgcat cagatcgttg
    14341 aacccggcat caaccagcac aaagtggcgg ctccccattt gtttgacgct ccgcacctga
    14401 gtaattaata cgccagactg cgctaccagg aagcgacccg gttcaatttc cagtttcaca
    14461 gggtggccca aatggcgggc gatttgctca cgcgcggcat tccacagacc ataataatgt
    14521 tcggtatcaa ccgcctcttc accctgttga taaggaacag aaagcccacc gcccgcagaa
    14581 atagcctgta aatcctgacc gaattcgatg acctgacgca ccatagcacc acacacctgt
    14641 tccagatggg cataatcaac gccagaacca atgtgcatgt gaatgccgac cagctgcaga
    14701 tgatgacgtt gtatcacgtc cagtgcggcg ggcagatcgg tgtaccagat accgtgcttg
    14761 ctgttttcgc caccggtatt ggttttttgg ctatgtccgt gaccaaaccc cggattaacg
    14821 cgcagccata cccgatgccc tggcgaaacc tggcccagtt ggtcgagcat atcaacagaa
    14881 cccgcattca ccggaatttg caattcactg acgcgttcaa gcgtcgcctg atcgataaca
    14941 tctgccgtaa aaacaatatc atcggggtgc gtttgcggat tgtaacccgc cgccaacgca
    15001 cgctctattt cgcctaacga gacggaatcc actttcacgc cctgctcacg cattaagcgc
    15061 aaaatatgaa tattggaaca ggctttctgt gcaaagcgca ccacatcaaa ctgtttcagc
    15121 gctgcaatct gccgacgaat aatttgcgca tcgtagaccc acaccgggca gccaaattca
    15181 gcgggcaaac gcagcagatt ttcggcggtg agatcggtat cggtgctgaa cagtgaatgt
    15241 ggcataacaa actccagata agtgcttttt tatgattacg ccacatcata aaaagaataa
    15301 aaaatatcga tttatgtcga gtctatgcaa aaatgatatg gattaccgga ttgcgagaga
    15361 gcgctaatgg ccgccgttaa cttacgtcat attgaaattt ttcatgcggt aatgaccgcc
    15421 ggaagcctga ctgaggcggc acacctgcta cacacctcac agccaaccgt cagccgcgaa
    15481 cttgcgcgct ttgagaaggt gatcgggctg aaattgtttg agcgcgtacg tgggcgatta
    15541 catcctaccg tgcaaggact gcgtctgttt gaagaagtgc aacgatcctg gtacggactg
    15601 gatcgaattg tcagcgctgc agaaagtctg cgcgagtttc gccagggaga actgtctatt
    15661 gcctgcctgc cggtcttttc gcaatctttt ttaccgcagc tcctgcaacc ctttctggca
    15721 cgttatcccg atgtcagctt aaatatcgtg ccccaggaat caccgctact tgaagagtgg
    15781 ctctcggccc agcgtcatga tttaggactc actgagacac tccatacgcc tgcgggaaca
    15841 gaacgtaccg aattactctc tttagatgaa gtgtgtgtgt tacctccggg tcatccgctg
    15901 gcggtaaaaa aggtattaac gccggatgat tttcagggtg agaactacat cagcctttcc
    15961 cgtactgaca gctatcgcca gttgctggat cagctattta ctgaacatca ggttaaacga
    16021 cgcatgatcg tagaaaccca cagcgccgcg tcaatctgcg caatggtacg ggcgggggta
    16081 ggtgtttcgg tggttaaccc gctcaccgca ctggattatg cggcaagcgg tttagtggtg
    16141 cggcggttca gtattgcggt tccgttcaca gtcagcctga tccgccccct gcaccgcccg
    16201 tcatcagcgc tggtgcaggc gtttagtgag catttacaag cggggttacc gaaactggtc
    16261 acttctcttg acgctatttt gtcgtcagct acgacagcat aaaagcgaca gcatcctcgg
    16321 catggatcgc cgcagtatca aacacaggca aaacactgcg ctcttctggc accagtaaac
    16381 caatttctgt gcagccaaaa atgacgccct gtgcgccctg ttctgcaagg cgagcaatca
    16441 cttgcgcata ataagcgcgt gacgcttcgg taaattgccc cagacacagt tcttcaaaaa
    16501 taatctgatt aattttcgcc cgttcatccg cttcaggaat aagacaattg atggaaaatt
    16561 gttccgtcag ccgcccgcga taaaaatcct gttccatggt gtaacgcgta cccagcagcg
    16621 ccacacgagt cattccggcc ccggtaattg cacgtccggt ggcatccgca atgtgtaaga
    16681 aaggcagagt gcaacgtgac tcaatggcat ccgccacttt atgcatcgta ttggtacata
    16741 acacaatacc ttctgcgccc gcccgctgta agccaagcgc cgcctcagcc agaatgtccc
    16801 cggttttatc ccattccccg cgacgctggc actcttctat ttcatgaaaa tcgacgctat
    16861 gtagcagcac ttgcgcagag tgaagcccac caagccgctg tttaatgcct tcatttatca
    16921 aacgatagta aggaatggtg gattcccagc tcattcctcc cagcaaacca attgttttca
    16981 ttcctctctc ctgatgtgtg ttaccgcaac aaggctgaat aaggaacgag acaaacgcct
    17041 caacggccaa gtgcccaatc tctattaacg aaaaaagggc cggatgtaca gcacatccgg
    17101 cccgtgaaat cagatgccga tatttctcaa cttctcgcct gccatcagtt tgcgttcgat
    17161 atgttccagc gtgacatttt tggtttccgg aatgagccag aaagtgatgc ccacaaacgc
    17221 aatgttcagc gcagtgtaga gccagaacgt accggcagcg ccaatgctgt cgagcagcgt
    17281 caggaaggtc gccgataatc atattcgaca cccagttcgt ggtggtcgaa caggtaatac
    17341 cgaaatcgcg gcatttcagc ggctgaattt cagagcacag gatccacacc actggcgcgg
    17401 cgctcatcgc ataaccggca atacacatca tcgtcatgcc aacagagagc caggacaatc
    17461 cactggaagc cgtaccgtta tcaaactgca tcaggcaata gcccagcacc agagtgccta
    17521 acgccatcac gctgaaacca attttcagag ccggtttacc cctgctttat ctaccgtaaa
    17581 caccgcaata aaggtggcga acataaaggt cagccctacg accagagtcg caatcatctg
    17641 ttgttctgtg gtcgtaaagc ccgccatttt gaagatacgc ggcgcgtagt acatgatgat
    17701 gttcataccg gtaaactgct gcatcgcctg caacaacata ccgagaaaca cagcacgacg
    17761 gacgttacgg ttgatcttaa acagtgccca accgccctgt tttaacttca ggctttcacg
    17821 aatttcgttg agttcttctc gcgctttttc cgacgtatcg cgcagcatac gcaatacttc
    17881 ttccgcctca atatgacgcc ccttttccgc caaccagcgc gggctatttg gcaggaagac
    17941 caccagaata atcagcagaa ctgctggtaa agcaagaacc cccaacattg cgcgccagtt
    18001 accgctataa ctgaacgctg tatcggataa aaacgccagc acgatgccga gtgtgaccat
    18061 caactggtac atactgatca tcttaccgcg aacgttttca cttgccattt cagaaagata
    18121 cagaggagcg gtgtaagacg cgatcccgac agcaatgccc agccccacac gagcggcgat
    18181 taacatctct acgctggtcg caaaagcgga ccctatagaa ccgagtacaa acaggatggc
    18241 ccccgccatc aggctgtatt tacgccccag gcggaacgac agccaaccat taaacagcgc
    18301 accaattgct gcgccgagca tcatgctact aaccacccat tcctgcaaat gactggtcag
    18361 cacaaagtga tcggtaatga acggcaacgc tccggcgatt acgccgatat caagaccaaa
    18421 taacaatcct gcgaccgcaa cagctaccga aacaaacata ttcatacgcc gcgtatcccg
    18481 caaagaacgt ggcgttaaag cagattccgt attgatagta accatttttt cctgccagca
    18541 gagagtaaga catagtgaaa aaatacgtga acaactcacg caggtgtcag gtcggaaaca
    18601 gcataaatat ggattaaatt gctgcgacat gtcgttatgt gatggatatt ccaattttca
    18661 aattaagttg aattattgag attattatta accacctaat tttacagcag ataaaattca
    18721 taaagttcat taattgataa ttaatatgga ttatttcata accatgatat ggattatgat
    18781 gatctacagg tataaaaaac cctgccatgc ggcagggtca taaaagtaag aagaatgaat
    18841 taacgcgcca gccaaccgcc atccacggca atggtataac cattcacata atctgaagcg
    18901 ctggaggcaa ggaacactat cggccccatc aggtcactcg gcagtcccca acgaccagct
    18961 ggaatgcggt cgagaatttc cgcgctacgt tgttcatctg cccgtagttg ttgagtattg
    19021 ttggtcgcca tgtaacccgg agctatcgca ttaacattaa tgttgtgttt agcccattcg
    19081 ttcgccatca atcgcgtcac acccatcacg ccgctttttg atgcggtata agaaggcaca
    19141 cggatcccgc cctggaagga gagcattgac gcgatattga taatcttgcc gccattgcct
    19201 tgcgcgataa agtgtttcgc cgctgcctga gacatgaaga atacgctctt gatattcagg
    19261 ttcatgacat cgtcccagtc tttttcgctg aactcgagag cgtcttcgcg gcgaatcaat
    19321 ccggcgttat tcaccaggat atcaatatga ccaaattcag ctaccgcgcg atccagcagt
    19381 ccaggaatgc catcaatctt tcgcagatcg gcggtcaggc ttaaaaaacg acgccccagc
    19441 gccgtgacct gctcgatggt ttcagtcggt tcaacgatgt taatgccaac aatgtcacag
    19501 cccgcttgcg ccagccccaa cgccatcccc tggcccagcc cagtatcaca accagtgacg
    19561 accgcaactt taccttcgag agaaaatgca cttaaaatca taacaatacc ttattcgttt
    19621 atgcccacaa ctagcgcaaa tctttaacgg ccacatggtc catatcatca aagacctggt
    19681 tttcaccaac catgccccag ataaaggtat aagctttggt tccgacgccg gaatggatcg
    19741 accagctcgg ggagatcacc gcctgctcgt tatgcatcac aatgtgacgc gtttcttgcg
    19801 gttgccccat catgtggaaa acgcaggcgt catcatccat attgaaatag aaataaactt
    19861 ccatccggcg ctcgtgggtg tgacacggca tggtgttcca caagttacct ggagccagct
    19921 ccgtcagccc catactcaat tggcaggttt ccagcacatc cgggacaaaa tatttgttaa
    19981 tagtgcgacg gttactggtg aggttatcgc ctaacgtgac tggagatact tcgtccgggg
    20041 tgactttttt ggtgggatac gtcgtatgcg cgggtgcgca attgtaataa aactttgccg
    20101 gagtggcggt atcaatactg gcaaagacaa cttcttttgc acctttacca acatacaggg
    20161 cgtcgcggtg accgatttca tagcattggc catcgacagt aatcgtaccg gcaccgccaa
    20221 tattgataac acctaactcg cgacgttcaa ggaaatagct tacgccgagt tgtttaccaa
    20281 cttccccgcc aacggaaacc gttttagtta tcggcataat gccgccaaca ataattcggt
    20341 caatgtggct gtaaaccatg gtgtactcat cggcgacaaa taccttttca accaaaaatt
    20401 cattgtgcag cccttgggta tccagcgttt ttgcgtgcgc actgtggatg ctctgtctta
    20461 cgtccacatc aacctccgat aatcagtgaa gcgtgaaaat agaaaacgat agtgaaacac
    20521 tgtttcgttt tctctataaa gggatgatat gcccatgggc tagggttttc aattaaaaat
    20581 aaaacaatgt tttattttta agttaaggat taaaaaaagt gcagtgtcga tcacgaatat
    20641 gtcatgagaa tggaaaaatg agggagccca gaaaatgtat gtcgacttgc cagccatcat
    20701 tattcaacag attaatgacg gcagatattt atcggtaagg aggaaatgca gagctactcg
    20761 tcacgttcaa tggtcaatgc cacgccctgg cccccgccga tacaaagcgt tgccagccct
    20821 ttgcgggcat tacgtttcac catttcatga accagagaaa ccaggattcg gcaaccggaa
    20881 gcgcctatcg ggtgaccgag tgcgatcgcg ccaccattga cattgacccg acgctcatcc
    20941 cactcaagca tcttgccaac cgaaagcgcc tgtgcagcaa acgcttcatt agcctcgata
    21001 agatcgacat cagccaactg ccagcctaca cgctccaggc aacggcgggt cgcatacacc
    21061 ggcgcaattc ccatcaatgc cggatctaca ccaacgctgg caaatgcgcg gatgcgggcc
    21121 agcacgggta aattcaacgc tcgtgctttg gcttcgctca tcatcattac cgcagctgcg
    21181 ccatcgttta tggatgatgc attccccgcg gtcacagaac cgagactatc aaatgaagga
    21241 tttaaacggg ctaaaccttc tgcactggcg tcagtgcatg gctgttcatc ggtatcaaca
    21301 accaacgtct gaccgttact ttggatcatt accgggacga tctcatcttt aaatcgtccg
    21361 gcgtcaatcg ccgctcgcgc tttttgttgc gagctaagtg cgtaagcatc ctgcaactga
    21421 cggctgatgc catattcgcg agccagattt tcggcggtga caccaatatg ataatcattg
    21481 aaggcatccc acaacccatc atgcaccaga ctgtcaacca actggctatt gccaagctgt
    21541 gcaccggtgc ggctatcagt cagaacatgt ggtgcgcggc tcatgttttc ctggccaccg
    21601 gcgatgacaa tatcagcctc gccacactgt atcgcctgag tagccagatg cagtgcttta
    21661 agcccagaac cgcaaacgtc attaatagtg attgcagaaa cgctattagg aagaccacct
    21721 ttaatagccg attgccttgc cggattctgc cctgcccctg cagtcaacac ctgaccaaga
    21781 attacttcat ccaccgcata tgcaggaacg ccggtacgtt ctattaacgc tttcacgacc
    21841 aaactaccaa gttccacggc ggaatgaccc gctaacgcac cacgaaagca gccgataggt
    21901 gtccgtaacg ccccgacaat cacaacgtct ttcatcacaa cctcgcacca attaacagtg
    21961 caatagaaaa tgattgttaa ttacagttat cttaattgtt taaaaaaagt gatttttatc
    22021 acaaaagaaa tatgcctgag cagcagtcag agacataact ggcacgtaag gtttgcaacc
    22081 actaacccac caatagaggg gtagataggg cgttaatctc ccatacttaa cctggtttat
    22141 ggtaaattgc cctccatttt gtttaatttg tagatgatac gttcagataa tgtctaatat
    22201 ttggtctaaa gaagaaactc tgtggagttt cgcgctctac ggcacagccg ttggtgcagg
    22261 cacgctcttc cttcctattc agttaggttc ggcaggggct gtggtcctgt ttattactgc
    22321 tctggtcgcc tggcctttaa catattggcc acataaagct ttatgccagt tcatcctctc
    22381 atcgaaaaca tcagcaggtg aagggataac gggcgcggta acacactact atggcaagaa
    22441 gattggtaat ctgattacca cgctgtactt catcgccttt tttgtcgtcg tgttgatata
    22501 tgcagtggca attaccaact cacttacaga acagctggca aagcatatgg ttattgatct
    22561 tcgcatccgt atgttggtga gtc
//
LOCUS       DADKRT010000055        22553 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.055, whole genome shotgun sequence.
ACCESSION   DADKRT010000055 DADKRT010000000
VERSION     DADKRT010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22553
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.055"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..591)
                     /gene="wcaD"
                     /locus_tag="JQ356_001786"
     CDS             complement(<1..591)
                     /gene="wcaD"
                     /locus_tag="JQ356_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416560.1"
                     /note="essential for colanic acid biosynthesis; colanic
                     acid is an exopolysaccharide produced under stress
                     conditions that confers acid and heat tolerance; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
                     /protein_id="HAY4621905.1"
                     /translation="MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLL
                     LFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIR
                     FKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVL
                     NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIK"
     gene            complement(566..1783)
                     /gene="wcaC"
                     /locus_tag="JQ356_001787"
     CDS             complement(566..1783)
                     /gene="wcaC"
                     /locus_tag="JQ356_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HAY4621906.1"
                     /translation="MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGK
                     ESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHV
                     LHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
                     TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN
                     NGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHT
                     FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI
                     ATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAGFSQRSRAAYSGQ
                     QMLEEYVNFYQNL"
     gene            complement(1780..2252)
                     /gene="wcaB"
                     /locus_tag="JQ356_001788"
                     /pseudo
     CDS             complement(1780..2252)
                     /gene="wcaB"
                     /locus_tag="JQ356_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
     gene            complement(2255..3094)
                     /gene="wcaA"
                     /locus_tag="JQ356_001789"
                     /pseudo
     CDS             complement(2255..3094)
                     /gene="wcaA"
                     /locus_tag="JQ356_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000654502.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
     gene            complement(3272..5434)
                     /gene="wzc"
                     /locus_tag="JQ356_001790"
                     /pseudo
     CDS             complement(3272..5434)
                     /gene="wzc"
                     /locus_tag="JQ356_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416564.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
     gene            complement(5437..5880)
                     /gene="wzb"
                     /locus_tag="JQ356_001791"
     CDS             complement(5437..5880)
                     /gene="wzb"
                     /locus_tag="JQ356_001791"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase Wzb"
                     /protein_id="HAY4621907.1"
                     /translation="MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKG
                     ADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVM
                     LFGHWDNECEIPDPYRKSWETFAAVYTLLERSARQWAQALNAEQV"
     gene            complement(5886..7025)
                     /locus_tag="JQ356_001792"
     CDS             complement(5886..7025)
                     /locus_tag="JQ356_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY4621908.1"
                     /translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF
                     DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE
                     LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ
                     VDVNIAAFRSQKTYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN
                     GREERISLQVLMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
                     TLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEF
                     RLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW"
     gene            7684..9267
                     /locus_tag="JQ356_001793"
     CDS             7684..9267
                     /locus_tag="JQ356_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY4621909.1"
                     /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
                     RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT
                     MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
                     VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD
                     HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEDEIRQLLERNQHT
                     RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
                     HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
                     VQKVQIIPLHKDGELEYEV"
     gene            complement(9541..11394)
                     /gene="asmA"
                     /locus_tag="JQ356_001794"
     CDS             complement(9541..11394)
                     /gene="asmA"
                     /locus_tag="JQ356_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HAY4621910.1"
                     /translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSG
                     YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK
                     QVMLKGAVIQLTPQTEVVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
                     HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA
                     AIEQINWQLQGADLPKQGIHGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL
                     TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
                     GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLD
                     ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
                     QAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
                     LNDMQGQSPVLALSGAGTLNLAEQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
                     GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM"
     gene            complement(11416..11997)
                     /gene="dcd"
                     /locus_tag="JQ356_001795"
     CDS             complement(11416..11997)
                     /gene="dcd"
                     /locus_tag="JQ356_001795"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HAY4621911.1"
                     /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
                     EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
     gene            complement(12089..12730)
                     /gene="udk"
                     /locus_tag="JQ356_001796"
     CDS             complement(12089..12730)
                     /gene="udk"
                     /locus_tag="JQ356_001796"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HAY4621912.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDCYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEHLQALKRGSAIDLPVYSYVEHTR
                     MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
     gene            13048..16345
                     /locus_tag="JQ356_001797"
                     /pseudo
     CDS             13048..16345
                     /locus_tag="JQ356_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
     gene            complement(16384..17241)
                     /gene="alkA"
                     /locus_tag="JQ356_001798"
     CDS             complement(16384..17241)
                     /gene="alkA"
                     /locus_tag="JQ356_001798"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HAY4621913.1"
                     /translation="MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDYYARSLAVGEY
                     RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAAR
                     PGLRLPGCIDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQR
                     LAAADPQALKALGMPLKRAEALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGIGRW
                     TANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG
                     WQPDGTDEL"
     gene            17375..18727
                     /gene="yegD"
                     /locus_tag="JQ356_001799"
     CDS             17375..18727
                     /gene="yegD"
                     /locus_tag="JQ356_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY4621914.1"
                     /translation="MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTRE
                     AVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF
                     QGLGGDEANAQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG
                     GTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLS
                     YRLVRSAEESKIALSNAAETRASLPFISDELATLISQQGLESALSQPLARILEQVQLA
                     LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            complement(18739..20661)
                     /gene="yegI"
                     /locus_tag="JQ356_001800"
     CDS             complement(18739..20661)
                     /gene="yegI"
                     /locus_tag="JQ356_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310906.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YegI"
                     /protein_id="HAY4621915.1"
                     /translation="MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTP
                     PPASKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYS
                     PAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS
                     DSFQINVNGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGR
                     HPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQ
                     AFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLTDCPWCTLDNQGVIY
                     FVDLGEEVITTSGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYI
                     ILIEIALSALSLLLCGLQAEPRYIILVPVLSAIWIIGSLTSKVYKAEIQQRREAFNRA
                     KMDYEHLVSQIQQLGGLEGFIAKRAMLEKMKDEILGLPEEEKRALAALYDTARERQKQ
                     KFLEGFFASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASC
                     DRRFVFRPNEAVTPADRQAVMAAKRHRLESALTVGATELQRFRLYAPARTMPLMEPLR
                     QAAEKLAQAQADLSRC"
     gene            complement(20658..21419)
                     /gene="pphC"
                     /locus_tag="JQ356_001801"
     CDS             complement(20658..21419)
                     /gene="pphC"
                     /locus_tag="JQ356_001801"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase PphC"
                     /protein_id="HAY4621916.1"
                     /translation="MSWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFL
                     ADGAGSVSQGGEGATLAVNEAMAFMVQKVQDGELGLNDVLATNMVLTIRQRLFAEAEA
                     KALAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFI
                     TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQE
                     QLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP"
     gene            complement(21416..22075)
                     /locus_tag="JQ356_001802"
     CDS             complement(21416..22075)
                     /locus_tag="JQ356_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY4621917.1"
                     /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGL
                     VTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
                     ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG
                     VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS
                     V"
     gene            complement(22296..22355)
                     /gene="ibsA"
                     /locus_tag="JQ356_001803"
     CDS             complement(22296..22355)
                     /gene="ibsA"
                     /locus_tag="JQ356_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsA"
                     /protein_id="HAY4621918.1"
                     /translation="MMKHVIILVILLVISFQAY"
BASE COUNT         5329 a         5952 c         5753 g         5519 t
ORIGIN      
        1 tttgatacca aactgtttga tgctgagcca aattgagatt aatgccagag cgaaaaatgc
       61 cggttcgaaa taaagtgctg tcgtgcgctt gccgccgaat ttaatgaaat tcagcacata
      121 gctgttgctg taaatcagat atttcgaaat cgactccata atactgctgc caccggtgag
      181 gataatttgc gccatctcca ctgccgccag cgccaccacc agccctacca ccagataaaa
      241 gaaacgtaat atcttgcgat ggttgtgtgg cgaaattgtt ttaaaacgaa tactccacac
      301 catgccaata atgatcacaa tatagacaaa cagcatggtt gaagtgacgt atttactggc
      361 atccagcgac tgaccaaaca ggtagttaaa tgccgtgagt cccgcaccaa tccctaaggc
      421 aatcatcaat tttttaacgc tgatgcgttc taaaaacagc agtaacaaga caggtaaaaa
      481 agtgacgata gtgatgggga aactttcacc aagctgggcg attttgacgt taaccagcag
      541 gtagatcagc ggcagcagca ggtagctaca gattctgata gaagttgaca tactcctcca
      601 gcatctgttg tccactgtag gcggcgcggc tgcgctggct gaacccggcc aacgtggtac
      661 caaatatcgc ctgcgcgatt tccggtttgc ttaattgcac tagttgcagc acctcttctt
      721 cgctgacggt tttaccgccg gatttttgca acacttcccg cgccgcgtcg ctatgggtgg
      781 caatcaccgg cacgccaatc gatagcgcct cacacaaaat cagcgggtag ttatcgacgc
      841 gagaactgaa caccagcgca tccatctgat tgagcgcgct catcaacttg cgcttgtcag
      901 tttcaaagcc gtgattaacc acgttgccag cggtgaacgg cgagaactta ccaaaggtat
      961 gcagttcgat tttgtcgccc agcgccatca tctcacgcac cagttgctgg ttagtcttgc
     1021 cgtcgtaacg caagtcatgc gccaccaccg cgattttcgg cttgccctgg gtttcgcgca
     1081 ccggaggcaa gtccgccaga atcgcttcgg ttgccatatc aataccatta ttgataatcc
     1141 ggcaacgccc tggaccgtac aggctattga aagcgtcagc cacatgctgg ctgggggaaa
     1201 taaactgaca gcccagcgcc agcatctcac ggaataactg gcgtttgccc gccaccagct
     1261 ggtgtgcgcg atcaatcttc accggcggat agttattcaa ggtcgggcat ttctggcagc
     1321 ccgttttcca gccttcgcaa ccgtcggtaa aggcgcagcg tccggtaaca ctccagtggt
     1381 cgtgcagcgt ccagaccaga gtgacgtccg gtttatggtt tttcactttt tcgcaaaagc
     1441 gcaccacgct cttaagattt agccagtagc tgtgcagcac atgaaaatgc aggaccaccg
     1501 gacccggtgt gcgagtaatg gtgcgatata actcattgaa attgccaaac agatcgcgat
     1561 taaacagacg aaacagggca atattcgcca tcgcggtcat ccgcggcgta tgtttgatga
     1621 cctgcggata gttctgatgg ctgacgctct ctttgccgcc tttgccgtaa ccgtagacaa
     1681 aatgtgacgc cagcccctgt tgcagcgcac gctggtggag atctaacgcc acacctgctg
     1741 ccccgccttc cgccagtcgc acattaaatt gcagaatatt catttaatta ccttcactcg
     1801 cgctttttct cctaccacca gcgcgttgtc cgggacagag tcgagcacca cgctgcccgc
     1861 acccacggtg acgttgttac caagcgtgat atcaccaaga ataatgacgt tggcaccgag
     1921 ttcgacgccg ttgccaatgt gtggacatgc catgttatcg gcaccacgat tgccgatagt
     1981 gacgccgtgg cgaatggtga aatcatcccc cgctaccacg tttttattga tcactacggc
     2041 gtaaccgtga tggatagtaa agcggcggcc tggatttcat aaccgaaaaa gcattcggtg
     2101 ataatgcgat acagcaccag cagcggggcc gcccacagat tgttgaggac gttctttttg
     2161 cgccacaccg aacaaaaatg agcaacacga taggcaagaa ccatgcagca cgggcgtaaa
     2221 ctccagctgt tggcacgcag atcttccagc atctttagtg cccccgaata ccatcagcca
     2281 gacgtttgcc gttacgcacc gacagcagcg tcagcaaagt gcgccaggtc atacgtttat
     2341 tgcggatctg gtagagggta aacagctgat attttttgct tacacggtca aatttatctt
     2401 tgtgctttcg gtaaaagtgg aagtacccgg agaatttttt cggtgacgag gtgatctgca
     2461 tttcaccgtg attgatatgc aggatctgcg tcgcttcttc cactttccac ggttcgccgt
     2521 actccaccac catccgcagg aagatgtcgt aatcctgtgc tgctttcagt tcggtatcga
     2581 acaaacactc tttgaaacgc catgcccaag taaagacctg attgccaatg atattgcgtt
     2641 tatagaacag gcggcgtgaa tacggcgatt tgggatatag cggcaaactt gctggttggg
     2701 aatagacttc gccctggcaa acgtagtcgt tagcgtacaa aaaggcgtga gtgaccagtt
     2761 gctgtttatg ggcgaggaag acgctcagac ggttgggtgt ccattcgtca tcgtcatcaa
     2821 tcccggtgat gtattcccct tgcgccagca taatcgcctg gttacgtacc gcgcacgccc
     2881 cgctgttaat atcgttgtgg atgtaagtga tacgcggatc gttgagggcg gtgacgtact
     2941 gttgcagttg ttcccaggag gtggagcaat catccacgat gatcatctcc cagttgctgt
     3001 agtcctagcg caggaccgat tttatcgccc gaatcgccag ttgttggcgg ttccaggtcg
     3061 gcatatagat tgagatcagc ggattgtctt tcataggttg ttctcccgga gtgtcgagat
     3121 gttctgccgg tttataagct tgtttacggg ttctgttgcc ggatgcggcg tgagcacctt
     3181 atccggccta cggagctggt ttgcttgccg gatgcggcgt gaaggtaggt cggataagat
     3241 gcgtcagcat cgcatccgac agcggatgtc gttatttcgc atccgactta tattcgtatt
     3301 cgtaatagcc ataatcctga tacgcgctgg cgcggcggaa gatggagttc agaatcaccc
     3361 ctttcaccgg aataccgttt tgctcaaagc ggctcagact ggtttccact tctttcaagg
     3421 tgttgaccgc ataacgcgcc accattaacg tggttccgac atgacgacca acaattgccg
     3481 catcggtcac tgccagaatc ggcggcgtat caatcaacac caggtcatag tttttactcg
     3541 cccagttcac cagttcggca aagcgttcgc tcatcaacag ttcagaagga tttggcggca
     3601 cctgaccgcg cgggatcagg tcaaatttgg caatagaggt cggtttagca gcggtagtaa
     3661 tatcgccctg accaatcaga atttccgaca ggccattaac gttattagtg cacagcagct
     3721 cgtgggtgta gcctttgcgc atatcgcagt cgatcaacaa cacccgttta ttggtctggc
     3781 tgatcaccgc cgccaggttg gcgcagacaa aggttttacc gattgacggg ctaaccccgg
     3841 tcatcatcaa cacattgttc tgtgcctgca tcatcgcgaa gtgcaaactg gtacgcagac
     3901 tgcggatggc ttcaatcgcc agatcggttg gattccccat cgccagtagc tggctctgtt
     3961 tatagcgttt aatccctttg atggttttga cgctatcgcg cgctttctgc cattccgaca
     4021 gcgggatgct ggcatagacg ctgataccgt gttcttccag cacctgcggg ctttcgatgc
     4081 cgcgattaaa caacgagcgc agcagcacac ccacgataga aagcatcagg ccaaggataa
     4141 tcgcgccgag gataatcagc cctttcttcg gttttagcac gccaggctgg gtgattgccg
     4201 ggtcaacaat gcgcacatcg ccgacggtgc tggcttcggt gattttcagc tcctgctctt
     4261 tattcagcag ttgcatatag acctgctgac cagactcgac atcgcgggtc aggcgcacaa
     4321 tctcctgctg ggttttcggc atcgccgtta cgcgaccgtt aagtttggct ttctcttctt
     4381 ccagcgcctg acgtttctcc agcagcgtgc ggtacgccgg gtgaactttg gtgtacagct
     4441 tggagatttc cgcctcttta aaggtcagtt cgttcaactg cgcgtcgatg ttcaccatcg
     4501 aatcgagcac cgctttcgct tccagcggca gatcaacaga atctttatcc tgacggaagg
     4561 cattcagttt gttttcggca acatcgaggc ggctacgtac ttccggtaac tgttgcgcga
     4621 ggaaagcgag gcttttcgac gcttccgccg atttgcgctc aatattttgt tcctgatagt
     4681 tacgggcgat gctgttaaga atgtcgcgga tctgttcgcg atcttcaccg gtataagtca
     4741 ggctcagtac gcctgcgtct ttgccgttct ccgttaccat caggctgttt tgcagttggt
     4801 tgatcatccc caacgtggag tatttggtga cggtaaactc actgcccggg cgggcgtgaa
     4861 tggcttcaac catcagcgtg acgccttctt ttttcagcat ctggcccgct tgcccacggg
     4921 cgctaaagcc gccatcactg ctcagggtgt agtttttatt gtccagcaca ttaagcgtaa
     4981 acacctagtc cgccatctct ttcgggcggt taaaggtagt cactttcacc gtctcgttct
     5041 ggcgtcccat cagtcgatcc cagcccgccc cgaaaatcgg gaacgtgttt ttgctcactg
     5101 caatatcgag gtcgagatcg tccaccgttt taccaagcac cagacgcgaa cgaatcaact
     5161 ggatctcggc gtccgatgca ggcggtttgt tggctaatgc cgaaccaatg tcctgcacta
     5221 acgaattgcc gctgttttgc tcgatttgta ccagtgcgtc ggcactataa atcggcgtgg
     5281 cgaagaaggt gtaaaccacg gcacagagga caaatacagc ggtgatgcca atcacccacc
     5341 agcgcgcttc aatgacggtg ccgaccaggc gaccaatatc gatttcatca ctgcccgtta
     5401 ccggagcggc atgttgtttt actttttctg tcattcttat acctgctctg cgttcaatgc
     5461 ctgcgcccac tggcgggcag accgttcaag taatgtgtac accgctgcaa acgtttccca
     5521 gcttttgcga tacggatcgg ggatttcaca ttcgttatcc cagtgaccaa acagcatcac
     5581 tttgccgcgc atctcaggtg ccatctcgca taagcgttcg atatggcgct tttccatggt
     5641 caaaatcagg tcatagttgc gacacaggcg gcggctgatt tgtcgtgcac agtggccttc
     5701 cagagacagt tgatgttctg cggcgacgct gatagcggta ggatcagcgc ccttaccgac
     5761 cagcgcgccg agtccagcgg actccacttt cagttccggg tgataacgtt gcagtaagcg
     5821 ttccgccgtc ggggaacggc aaatattgcc gacacagaca actaatatgt tgttaaacat
     5881 gacgattacc agttatgaat gtcgctggct gtatccgtca tgtaacggac accgctaata
     5941 gttggcagca actgattgat cagacggttc cagcgggaaa ccggggcggt ggtgacatac
     6001 accacgtcat aaggttgcag gcggaattct gtcgccatca ccagcgacgt ggcatcggac
     6061 atatccagct ggtagatatt ggcaatcttg ccgttacgcc cgccctcgcc tttcagcgga
     6121 cgaatgacaa agatgccgct ggcgttggag gtggtcatgt cgataccttc agcattaccc
     6181 agggcttcag tcagggtcat gccgctaaag tccattttca gggtgctctg tttcttcact
     6241 tcacccatca caaatacttt cagatcatca ttacgcggca cgtagagaat atcgccggga
     6301 taaagcagtc ggttctgatt gaggtcgccg ttttgcatca gcacctgcaa agaaatgcgt
     6361 tcttcacgac cattgtgtgt tagcaccacg ttgcgccagt cagcggtgtc ggtcaggcca
     6421 cctgcggcgt tgatggcgtc gagaatggtc agtggtacgt tggtgatcgc ctgttgaccg
     6481 gatttattca cctgacctga gatataggtc ttttgtgagc ggaaggcggc gatattaacg
     6541 tccacctgcg ggtcagcgat gtacgtcgct aagcgcccgg taatatcact gcggatttca
     6601 gcgagcgttt tcccgactac gtgaaccttg ccgatatacg ggtaaaacat agtgccgtca
     6661 ggctgtaccc agttgccggt gtcgctggag ctgcggtact gaccagctgg cgtggtgagt
     6721 tccgggtgat cccagacggt gacattaaga acgtcccccg gcccgacgcg atactggtaa
     6781 ttcgcgatct cgctttccag cgtcatattg gggcgcgcta cattcgggcg tgggcgtaat
     6841 tggtcaatca ggcgcggggt cagcggataa acattcacca ttttgtcgag atcgaaatca
     6901 gcgtcctgct gtttgatgac gtctttgccc atcgtcgaca tattgctgcc cggaagtact
     6961 gtgcaaccgc ttatcaaggt tactgacacc aataatggca tcaatttcat tttggatttc
     7021 atcattgttt atttatcact ttggcagagt aattatcctg tgcactatta atagcaatgt
     7081 cgccatgcac atttaccttg cagttaattg aatacaaatt taactggcat cagtcctaaa
     7141 aaaattgatt tcatccgcag gctattgaca gaataattca gactggtctt tcaggcatcc
     7201 agacacgcta ccgcccctgg ctttttagcc accaatactc tgatttagct taatttttta
     7261 aaccctctct gcatacaatc gttgatgaga aagggttatt gcggaaatta acttccgaat
     7321 ataaggtgac attatggtaa ttgaatattg gctctccaat aatgcaggag gaagtgttac
     7381 agctaacgga atagcaggca aggtaacaat tcggcaattg gctattttta agaattatat
     7441 taagtgtcat tcaatatggt ttttaggagt ttctttaggt tgacaatatt taatattgcg
     7501 cctccgcatg cgatatttct taaataatgt tttattatta ccacttttaa ttcagggata
     7561 atgtgaggtt attaccctca aataatatga gataaatagt gctgcaacat tgcatttttg
     7621 ccccgattta tccatgatcg aattgtgaca tttgtcatac aacgaatagg ttttgtactt
     7681 actatggaat ggattgccga tccgtctatc tgggccgggt taatcacgct gattgtgatc
     7741 gaactggtcc tcggcattga taacctggtc tttattgcca tcctcgccga aaaactaccg
     7801 ccgaagcagc gcgaccgcgc acgggttacc gggctgttgc tggcgatgtt aatgcgcctg
     7861 ttactgctgg cgtcaatctc ctggctggtc accctgacgc aaccgctgtt cagcttccgc
     7921 tcgtttacct ttagcgcccg cgacttaatc atgctgtttg gtggtttctt cctgttgttc
     7981 aaagccacga tggagctgaa cgaacggctg gaagggaaag acagcaataa tcccacacaa
     8041 cgcaaaggtg cgaagttctg gggggtggtg acacaaattg tggtactgga cgccatcttc
     8101 tcactcgact cagtgattac cgccgtcggg atggtcgacc atttactggt catgatggcc
     8161 gccgtggtta tcgctatcag cctgatgttg atggccagca agccgttaac gcaatttgtt
     8221 aacagtcacc cgaccatcgt tattctctgc ttaagcttcc tgttgatgat tggctttagc
     8281 ctggtggcag aaggtttcgg cttcgtcatt ccgaaaggct acctgtacgc tgccattggt
     8341 ttctcggtaa tgatcgaggc gctcaatcag ttggctatct ttaaccggcg acgttttctt
     8401 tccgctaacc agacgctacg ccagcggact accgaagcgg taatgcgcct gcttagcggg
     8461 caaaaagaag atgcggaact ggacgccgaa accgcgtcca tgctggtgga tcatggtaac
     8521 cagcagatct ttaatccgca ggaacggcgg atgattgagc gggtacttaa tcttaaccag
     8581 cgtactgtca gcagcattat gacgtcgcgc cacgatattg agcatatcga tctcaacgcg
     8641 ccggaagacg agatccgcca gttgctggag cgaaatcagc atacgcggct ggtggttacc
     8701 gacggtgatg acgcagaaga tttgctcggt gttgttcacg ttatcgacct gctacaacag
     8761 tcactgcgtg gcgaaccgct caacctgcgg gtgttgattc gccagccgct agtgttcccg
     8821 gaaaccttgc cgttgttacc tgccctggag cagttccgta atgcccgcac acactttgct
     8881 tttgtggtgg atgagtttgg ctcggtggaa gggattgtga cattaagtga cgtcactgaa
     8941 accattgccg gtaacttacc gaacgaagtg gaagagatcg acgcccgcca tgatattcag
     9001 aagaatgcgg acggttcctg gacggcgaat ggtcatatgc cgctggaaga tctggtgcaa
     9061 tatgtgccgc tgccgctgga tgaaaaacgt gaatatcaca ccattgccgg gctgttgatg
     9121 gaatatttac agcgtattcc aaaacctggc gaagaagttc aggtggggga ttatttgctt
     9181 aaaacgttgc aggtggaaag ccatcgcgtg cagaaggtgc agattattcc gctgcataag
     9241 gatggcgagt tggagtacga ggtgtgatgg tatcggtcat tttacccaat agccgaaagg
     9301 aataagatga gggaaccgcg ccagcggcga tttaccgccg ggagcccggg ttgccagggt
     9361 ggtggcgatt gagcccccct ggcacgttca ccggcttgag cgttccatag tagcgaggaa
     9421 catcaagtga acggaacagc cttcgatctt acatattcag aatataatga tgccgccacg
     9481 aacgcctgat gcgacgcttt acgcgtctta tcaggcctac aggacaggtc accaggtaac
     9541 ctacatcttc tccagcaact tcttcacatc tttgccattg cgggaatctt tattccgctc
     9601 ggcccagtca ttcagacgac gtttcgcttc gtcctgtaga tgtttgcgca gtaactgatc
     9661 cacttgcaga ctgtaattga gttgctgcca gttgccataa acccgcagcg gtactggcgt
     9721 ttctttaagg aaatcaatca gtttgctttc cccgttccag ccacccacga cccgaatatc
     9781 aaactgggtg tcgcaggttt gctccgccag attcaacgta ccagccccgg aaagcgccag
     9841 cacaggcgat tgaccttgca tgtcgtttaa cgtcacgacg ccatccttca acgtcaaatc
     9901 ggtggtaaag cggtcaagac gcgttacgtt atcgaagttt tcagcggcct tcacatcacc
     9961 accattacgt tctaccgctt gctgaatcat ctgctggaag ttcatccctt ccatgcgcgt
    10021 gtcggtcatt tcgacatgtg cctgtccttg ccagttgtgg cggaatgcgt cggcatctat
    10081 gtcagcaccg gagaaatcac cagccagtga catctttccg gtcaacgaaa tcggatagtt
    10141 aaacgccttc agaatggtgc caatctcaac gttttccagc cgtggctgga agtttatccg
    10201 cggatttatt gatgtcgcgt ccagcgtgcc cggcagtgaa acctgtccac cgttaagctt
    10261 gccctgcagt tgagtaattt ccagcaaacc cgacttgttg gtcatttgcg tggcaacatc
    10321 tgtaaaattc attccgcgcc agcgcacgtt actggcctgc aacaaaatat cagccgtaaa
    10381 gccttgcagt ccctgatatg ccggttcatc aatacgcgaa gaaatgaccg ggcgcggcaa
    10441 cgttgattgg ctctgcccct gctgcgcggc accgttttca ccattcgctg tttcattaag
    10501 cgggatgagg ttgtcaagat tcagttgcgg gaattgcagt ctcagctgcc attccggttt
    10561 ctctgtcagc gtgacctgtg cttgcccgct cagcgtactg tcattggcgg tcaaactaat
    10621 ttggttaaat gaaaggcgtt tatgtgactc ctgccactgg gcctggaaac tcccctgccc
    10681 atgaatacct tgttttggta aatctgcacc ctgcaactgc cagttaattt gttcaatagc
    10741 cgccgttaaa tcatgcggat aatcagaagc atctaccgta ccgttaaggg atatcgtgag
    10801 atcgcgctga tcgcgattaa cccgcccgga gaactcaaat gaaccacgat gttggggatc
    10861 ttgttccatt tgcaggcgaa tattgcggat tgtcacctgc tcgtcatctt catgctggaa
    10921 caccagcacg ctgtccgcca ccttaagact ggatatatca aacgaccatc cgcgatcgtc
    10981 tgacagatcc ggcaaggtat tgtcgcgcgg tgcaaccgga gcgtcttcac tgcgcaccac
    11041 ttccgtctgc ggcgtcagtt ggatcactgc cccttttagc atcacctgct taacgctcag
    11101 ttgatgactc agtagtggta aaagcgccac gtccagacgc atgttgtcgg cgcgaaccag
    11161 tggctggctc gcgccctggg cggtgagaga cattcgccca gagaggatac taagctgcgg
    11221 ccagacgtgc caacgcagtg gcccgtcgag ctgcaattga taaccgctac gtgcagcaac
    11281 ttgcttgacc atatagttgc ggaaatcatt cggattcacc agcaacacta acgcagataa
    11341 cccggccacc agcacgacca ggagtatcat cagcgtcgtc agaaatcgtc tcatggtatc
    11401 ctcaatgggc ctgaattagt ctttatcgat tcggctggct accgcgccct gctggttgcg
    11461 atatttcgca tcttcacggc ggttgtaagg tcgcgccgcc gggccggaaa gcggctcaaa
    11521 gctcagcgca ccaattaaca tgcccggacg cagcgccagc ggcagcttac cggagttgta
    11581 gaactccagc acaatgcaac cagaccagcc cggatcgata cggtgcgcgg tgacgtgcac
    11641 catcagcccc agacgcgcca aagaggaacg cccgtccagc cagcccacca gatcggctgg
    11701 cagcgtcacc gactccagcg tcaccgccag cgccagttct cctgggtgaa gatagaacgc
    11761 ctcgccctcg tcgagaacga tctcatcgct catcacgcgg tcaagcgcgg cgctcacttc
    11821 atctttggga ccgctcagat cgataaacgc tgccgtgtga ccacggaagg tacgaaattt
    11881 attgcccagg cgtacatcca ccgtcgcgcc gttaatacgc tccactggcg gacgtgggtt
    11941 gatcgacaaa cggccttcat caagccaggc ttcaatatct cggtcacaca gacgcatggc
    12001 attttctcct ttcgcgcatc actcccttaa cgccaattac gtcaagggca taccaggtta
    12061 tcactgaacg gtacacaatt tatcaagctt attcaaagaa ctgacttatt ttcgctttca
    12121 atatatcgat cgcgatgcgg tttttcccgc cgcgcggcac gataatgtcc gcatattgtt
    12181 tagaaggctc aatgaattgc aggaacatcg ggcgcacggt tttttgatat tgcgccatca
    12241 cggaatccat tgaacgccca cgctcgttaa cgtcacgctt gatgcggcgc atcaggcaga
    12301 tatccagcgg ggtatcaacg aaaatggaga agttaagttc gtcacgcaaa cgcgcatccg
    12361 tcagcaacaa aatgccttcg agaatgatga ccttcttcgg ctcaaccgtc accgtttctt
    12421 tcatacgcgt atgttcaaca tagctgtaaa ccggcaggtc aattgccgag ccgcgtttca
    12481 acgcttgtaa atgctcaagc agcaggttgt gatccatcgc gctgggatgg tcgtagttgg
    12541 tcttaacgcg ttcttccatc gacagatggc tttgatcttt gtaatagcag tcttcgggaa
    12601 ttacgccgat gtgttcatca ccgacttgct cacgtaattc acgataaagg gtactggcaa
    12661 taagactctt gccggaagcc gatgcgccag cgataccgat aatgacgcac tgatgagact
    12721 gatcagtcat atatttagcg acctgattaa cctggatgtt aggaaggggg cgacgaagcg
    12781 ccaaacgcgg caattatagg gatttcatcc gcctgatacc agtcgaatag cgttgccgcg
    12841 cgctcagagt taattgttga caaagaattc ccggtggcaa attacgttga tcagttttat
    12901 gtaaggtaaa aaatgttata cgcagttgcg caaattatcc gcctttacgt cactttatga
    12961 gcaattcaca tataaaatgt aaaacttttg tactagcata aacacagaaa cgaatactgg
    13021 cgacctggtc ttgcggataa agcggtaatg agcaaacaat cacagcatgt attaattgcc
    13081 ctgccccacc cactgcttca cctggtcagt ttaggtttag tctcgtttat ctttaccctt
    13141 ttctcgcttg agctttcgca gtttggcacc caactcgccc cactgtggtt cccgacgtcc
    13201 atcatgatgg tggcgtttta tcgccatgcc gggcgcatgt ggccgggaat tgcgctgagc
    13261 tgctcgctgg gaaatatcgc cgcatccatc ctgctttttt ccaccagctc gctgaacatg
    13321 acctggacga ccatcaatat tgttgaagcc gtggtcgggg cagtgctgct acgtaaattg
    13381 ctgccgtggt ataacccctt gcaaaatctg gctgactggc tgcgtctggc attcggcagc
    13441 gccattgttc cgcctctgtt agggggtgtt ctggttgtcc tgctgacgcc cggagacgat
    13501 cctctcaggg catttttgat atgggtactg tcagaatcca tcggcgctct ggtactggtg
    13561 ccgctgggat tgttatttaa gccacactat ctgctgcgcc atcgcaaccc acggttactt
    13621 tttgagtcac tgctcacatt agccatcacg ctgacgttaa gctggctttc tatgttgtac
    13681 ctgccgtggc cttttacttt cattattgtg ctgttgatgt ggagcgccgt gcgcctgcca
    13741 cgaatggaag cctttttgat cttccttacc acggtgatga tggtgtcgct gatgatggcc
    13801 gcggatccct ccctgcttgc tacgccgcgt acgtacctga tgagccatat gccgtggcta
    13861 ctgtttttgc tgatcctgct gcccgccaac atcatgacca tggtgatgta tgcctttcgt
    13921 gcggaacgca aacacatttc cgaaagcgaa acccgctttc ggaacgcgat ggaatattcc
    13981 gctatcggta tggcgttagt gggcaccgag ggacaatggc tgcaaaccaa caaagcgctc
    14041 tgccagtttc tcgggtacag tcaggaagag ctgcgcggac tcacctttca gcaactgacc
    14101 tggccggagg atctcaataa agatctccaa caggttgaaa agctgataag cggtgaaata
    14161 aacacctatt caatggaaaa acgctactac aaccgtaatg gcgatgttgt ctgggcgttg
    14221 cttgccgtct cactggtgcg ccacacggat ggcacgccgc tctattttat cgctcagatt
    14281 gaagacatta acgagctaaa acgcaccgaa caggtgaatc agcaactgat ggagcgcatc
    14341 acgctggcta acgaagcggg cgggattggc atctgggagt gggagctgaa gccgaatatt
    14401 tttcgagctg tatgaaattc ctccgcatat caaaccgaac tggcaggtgt ggtacgagtg
    14461 cgtgctgccg gaagatcgcc agcatgccga aaaagtgatt cgtgattcgt tgcaatcacg
    14521 ctcgcccttt aagctggaat ttcgcattac cgtaaaagac ggtattcgcc atatccgcgc
    14581 cctcgccaac cgggtactga ataaagaagg cgaagtcgaa cgcctgctcg gcattaatat
    14641 ggatatgacc gaggttaaac agcttaacga ggcattgttt caggaaaaag agcgcctgca
    14701 cattacgctg gattccatcg gtgaagccgt ggtctgtatt gatatggcga tgaaaattac
    14761 ctttatgaat ccagtggcgg agaagatgag cggctggacg caggaagaag cattaggtgt
    14821 tccgctcctg acggtgttgc atattacttt tggcgacaac ggaccattaa tggagaacat
    14881 ttacagtgcc gacacctcac gttccgcgat tgaacaagat gtggtgttgc actgccggaa
    14941 cggcggcagt tacgacgtgc attacagtat tacgccgtta agtactctgg acggcagcaa
    15001 tataggctcg gtactggtga ttcaggacgt caccgaatca cgcaaaatgc tgcgccagct
    15061 gagctacagc gcctcccatg atgcactgac gcatctcgcc aatcgcgcca gttttgagaa
    15121 gcaactgcgt atcctgctgc aaacggtaaa cagtacacat cagcgacatg ccctggtgtt
    15181 tatcgatctt gatcgcttta aagcggtgaa tgacagcgcc gggcatgcgg cgggtgacgc
    15241 tttactgcgc gaactggcgt cgttgatgct gagtatgctg cgctccagcg acgtgctggc
    15301 gcgactcggt ggtgatgaat ttggtctact gttgccagac tgtaatatcg aaagtgcgcg
    15361 ttttatcgct acacgcatta tcagtgccgt gaatgattat cactttatat gggaaggccg
    15421 tgtgcatcgg gtaggtgcca gtgccgggat taccttgatt gatgacaaca atcatcaggc
    15481 ggcagaagtg atgtcgcagg ctgatatcgc ctgttatgcc tccaaaaatg gtggacgggg
    15541 ccgggtgacg gtttacgaac cacagcaagc tgccgcacat agcgaacggg cggcgatgtc
    15601 gcttgatgaa cagtggcgga tgattaaaga gaatcagttg atgatgatcg cccacggtgt
    15661 cgcttcgccg cggatcccgg aagcgcgtaa tttgtggctg atttcactta agctctggag
    15721 ttgcgaaggc gagattattg atgaacaaaa atttcgtcgt agcttcagcg atccggcact
    15781 tagccatgct cttgaccgac gggtattcca cgaatttttc cagcaggccg caaaagcggt
    15841 tgccagtaaa ggcataagca tcgccctccc cctttccgtt gccggtttga gtagcgccac
    15901 gctggtgaat gatctgcttg agcagctggg aaatagccct ctaccaccac ggttattaca
    15961 tctgattatt ccggctgaag cgattttaga tcacgcagaa agcgtgcaaa aactgcggct
    16021 ggtgggatgt cggatagtgc tcagccaggt gggccgcgat ctgcaaatct tcaactcgct
    16081 gaaagcgaat atggcagatt acctgctact tgatggtgag ttatgcgcca acgtgcaggg
    16141 taatttgatg gatgagatgc tgattacgat tattcagggg cacgctcagc gactcgggat
    16201 gaaaaccatc gccgggccag tcgttttacc cttagtgatg gatacgcttt ctggcatcgg
    16261 cgtcgatctg atttatggtg atgtgattgc cgatgcccaa ccgctggatt tgctggtgaa
    16321 tagcagttat ttcgcgatta actgagagag cgtttgccca ttgcctgatg cgacgtatca
    16381 ggcctacaat tcgtccgttc cgtctggttg ccagccttcc gtataccaga tatgcaacag
    16441 cgcataagaa cgccagggct tccagcgctc ggcataacgg cggatttgtg ccggtgtcat
    16501 ccccggaaat cgctgtttaa tcagataatc atccggcaga aaaacatctt tcgcctgcca
    16561 gccacgcaaa gcgaaataat tcgccgtcca gcgcccgata cccggaaaag tttgcagcgt
    16621 tttcatcgcc tgctccacat cgcccggaat tgtcattggt aagctgccct ccagcgccgc
    16681 atttgccaga tgaatcagtg cctctgcccg tttcaacggc atgcctaacg cttttaatgc
    16741 ctgcgggtcg gctgctgcca gccgctgagg cgtggggaag cagatatact ccggaaaatc
    16801 atccagccgt tcgccataaa gctgtacaac tttggcagtc aattttgccg ccatcgccac
    16861 gctcaccagt tggcctaaaa tcgcccgcac accctgctca aaagcatcaa tacagccggg
    16921 taaacgcaat ccgggccgcg ccgcgcctaa cttgcccaac gcaccgttaa caatctgcgg
    16981 gttacattgc agatcaaaca ggcggctcat tttcgccaga cactcagcgg caacgggttc
    17041 taaacctgca cttaaattta tgtgcagagt atggcgggct atatccggaa tagcagtcac
    17101 cacgccgcga tattcgccca ccgccagact acgggcataa taatcgtcag cgaccgtttc
    17161 cacaccactc actgcacggg cggcgagaaa tcccaacatc cacgaccagt catacggcgg
    17221 ctgccagttc agggtataca tcgcatctcc ttattcatcc gctttcagca taaacgttat
    17281 tcagacgcta cgctttgctt tcatattccg gttgtcgcga cggcaacatt tcgctaaagt
    17341 cacgcccctt cttcaccggc atggggatta tttcgtgttt attggttttg attacggtac
    17401 agcaaactgt tcagtggcgg tcatgcgtga cggtaaaccg cacttgctaa aaatggaaaa
    17461 cgacagcacg ctgctgcctt caatgctttg cgcgccaacg cgtgaagcgg taagcgaatg
    17521 gctgtaccgc catcatgacg ttccggcaga cgacgatgaa acgcaggcgt tgttacgacg
    17581 ggcgattcgt tataaccgcg aagaagatat cgatgttaca gcgaaaagcg tgcagttcgg
    17641 tctttcctca ctggcacagt acattgatga tccagaagaa gtgtggtttg tgaaatcacc
    17701 aaaatcgttc ctcggtgcca gcggcttaaa accgcagcag gtagcgctgt ttgaggatct
    17761 ggtctgcgca atgatgttgc acattcgcca gcaggcgcag gcgcagctgc cagaagcgat
    17821 tactcaggcg gtgattggtc gcccgatcaa cttccagggg ctgggcggcg atgaagcaaa
    17881 cgcccaggcg caagggattc tggaacgcgc ggcgaagcgt gccggattca gggacgtggt
    17941 attccagtat gagccggtcg cggctgggct ggattacgaa gccaccttgc aggaagaaaa
    18001 acgggtgctg gtggtggata tcggtggtgg tacgactgac tgttcattgc tgctgatggg
    18061 accgcagtgg cgttcgcgtc tcgatcgtga agccagcctg ctgggtcaca gtggttgtcg
    18121 tattggcggt aacgatctgg atatcgccct ggcgtttaaa aacctgatgc cactgctggg
    18181 tatgggtggc gaaaccgaaa aaggcatcgc cctgccgatc ctgccgtggt ggaatgcggt
    18241 tgccatcaac gacgtacctg cgcagagtga tttctacagt agtgccaacg gtcgtctgct
    18301 taacgatctg gtacgcgatg cccgcgaacc ggaaaaagtg gccctgttac agaaagtctg
    18361 gcgtcagcgt ttaagctatc gcctggtacg cagcgcagaa gagagcaaaa tcgccctttc
    18421 aaacgctgcg gaaacccgcg cctcactgcc gtttatcagc gatgaactgg ctacgctgat
    18481 tagccagcaa gggctggaaa gcgccctcag ccagccactg gcgcggattc tggaacaggt
    18541 gcaactggcg ctggataacg cccaggaaaa accggacgtt atatacctga ccggcggtag
    18601 cgcccgttcg ccgctgatta aaaaggctct ggcagaacag ttgccgggca ttccgattgc
    18661 aggcggcgat gactttggct ccgtcaccgc cgggctggca cgctgggcgg aagtggtatt
    18721 tcgttaaaag aaaatggctc agcagcggct taaatctgcc tgcgcctgag ccagtttttc
    18781 tgccgcctga cgtaacggtt ccatcaacgg catggtccgt gctggagcat aaaggcggaa
    18841 tcgctgcaac tctgtcgcgc cgacagtcaa cgccgattcc agccgatgtc gtttggcggc
    18901 cattaccgcc tgtctgtctg ctggcgttac cgcttcgttc ggcctgaaca caaaacggcg
    18961 gtcacagctc gctttccagt cgataaccgc ctgggtcaga tggtcgccaa accctttaac
    19021 ttgcttaacg ccacgacggg taacatccgc tgctgtttca ataccaaaag accgtaacgc
    19081 cgctttacgc gcagggccaa cgccgggaat agaggcaaaa aatccctcca gaaacttctg
    19141 cttctgccgt tcccttgcgg tgtcataaag tgctgccaga gcgcgtttct cctcttccgg
    19201 taacccgaga atttcgtcct tcattttttc gagcatcgcc cgtttggcga taaaaccttc
    19261 cagcccgccc aactgttgga tctggctgac taaatgctca tagtccattt tcgcgcgatt
    19321 aaatgcctca cggcgttgct ggatttctgc tttgtacact ttgcttgtca gactgccaat
    19381 aatccagata gccgacagca caggaaccaa aataatataa cgcggttctg cctgaaggcc
    19441 gcaaagcaac agcgataacg ctgacagtgc gatctcaatc agaatgatgt attcgcgccg
    19501 taacaggcct aaaggaagcg gcctgccagt cggttggaaa tgatcgggta atggcaattg
    19561 caatgctggc ggtgctactg acgccatcac catcgcccag actttcgcca gcacaaaatc
    19621 accgctggtg gtaatgacct cttcaccgag atcaacaaaa tagataacgc cttgattatc
    19681 cagcgtacac cacgggcagt cggtcaaatg agcgggataa acatgcattg ccgaaacggg
    19741 acatttcttt aactgttggc gcagagaatc aagtgccgct acccacgctt tagccgtcgg
    19801 acgcccggtt gccacgccac tttccgtgaa tgcctgctga aacatggctt caacatcact
    19861 cggtaacatc gatagcggaa tcgatcgtgg cggcggtttt aaaccacgtc gctgattatc
    19921 tgacgcgtag gcataacgga aatgggtaat atccgtctcc agcgcattac ccgcatcaga
    19981 gataagcggc acaccagaat aaggatgccg gccaccaaac aagacgtgaa aaatcagcaa
    20041 cgcaaggcca aaattatcgt gattttctgt gcgttcaaag ccgacaaatg acgacaaggt
    20101 ttgtagctct ggcggcgtaa aatgcgacac gccgacttcg cataaatgca gtgtgccatt
    20161 gacgttaatc tgaaaggagt cgctatcaat cagtaccact ttgctgtcgc gacctaccat
    20221 aaaactgttc tggtttacgt cacccacgac gtgcccgtgc tcgtgaaccg tagcaaaaga
    20281 tgaagcaata ttgcgcgcaa catagagtag aaaatcccac gcacaatgag ggtaactctg
    20341 gcgacgatgt gccgggctat agatcatatg aatcggttct ttaccagaaa cttttggcat
    20401 cataaaaccg ataacttttc cgcctcgtcc accgtgaagc gttgcctgcg gccaggcgac
    20461 ataattcaac aactgcgcgt cagctgtcgc agccataaag gcaagtttgt cctgttttga
    20521 ggcgggtggc ggcgtgtgat aaatcttggc gacgctatcg acaaactcct cgatatcata
    20581 aaccgcgcct tcaccgcctt tgcccagttc acggcctggc gtaacgcact caccagtagc
    20641 agtatataaa gtgggtttca tggtaaccac agcgccagtg ccaacgtttt atcatcatcc
    20701 gtacgctcgt ttaccgccgg gctggacaaa aactgcttta acaattcagg taataaatcg
    20761 agttgttcct gcgttactga cgccagtcca ttgaaaaacg gggtaaagaa aggcacatga
    20821 ggagaattat ccagcatatt taacgccagc cgctgaatac catccgtaaa tgctgcaact
    20881 ttatgcgcac gcccagtgct ggtgaaagtt tccagtctgg aaacggcatc ttcgtcggta
    20941 atgaagtgcg tcatgttggc atattcaccc accatcggcg tgagaggcaa ttgcagaccg
    21001 tgacccaaat ctaccaccac gccgccatcg ccaatctgca taatcaaggt gccgtcaggc
    21061 gatgaaatca atcccagaaa cgtgcaggca aaatcgcgaa ctgctaatgc tttggcttct
    21121 gcctcggcaa aaagtcgttg acgaatagtc agtaccatat ttgtggcgag gacatcatta
    21181 agccccaatt caccgtcctg tactttttgc accataaacg ccatcgcttc attgacggcg
    21241 agcgtcgcgc cttctcctcc ctgcgaaacg ctacctgcgc catcagcaag gaacatcacc
    21301 agtaatggtt gctggtcgtt taaccagaca acctgcatct ggcaggcatc ctgacaaggc
    21361 aaatcagcac taatgtgcga tgttccaaca gcggatgcat aaaccagacg ccagctcaca
    21421 ctgacgtcca gccttttggc gcttccagca caacttccgt tcccggcgtg gagcgggaaa
    21481 ccgaacgcag cgaactggat aaccagctaa acagttcacg gaattgtaat ccctgcagtg
    21541 gcaaaggctg acgaacgctg atttgtgcca gagtcttcat atccgccccc tgaacaccga
    21601 tggaaaagaa ggcaaacttc ttatcttctt ccccctgaaa cactttgttg gcggcagcct
    21661 gccactcatc ggttggagcg ccatcggtga tcaggaaaat ccacgggcga taatacgaaa
    21721 taccatttgc gcggtactca cgtttcctct cttcaaccat atctagggct ttggtaatgg
    21781 cggcccccat aggcgtatcc ccctgggcaa acaggatggg cgggaaaaag ttagcggcgc
    21841 tggtaaaggg ttgttccaca tgcaccgggc cgaacgtcac aatgccgagt tccactcttt
    21901 ttaaagccag cggatcagca agcagttcat cacgaaaggt aaccaatccg gcgttaagtt
    21961 cattaatagg tctgccgctc atcgagccag aaacatccag cagcaaaatg caggggcaac
    22021 gtggttccgg gttactggca aaatcgctgg tggcaaacgt gatttgttcg ctcataagaa
    22081 atcctttctt agagaattat cgaggtccgg tatcataccg attgcaataa tgaaataaga
    22141 gcaaacgaag aaactttcag aattaggccc gtcggcgcag aaaattttgc tattcgcctc
    22201 gcaagaacgg agagccgtcg attgacacta agggcggagt gacataattt caggagtgag
    22261 ggttagggag aggtttcccc ctccccctgg tgttcttagt aagcctggaa gctaatcact
    22321 aagagtatca ccagtatgat gacgtgcttc atcataaccc tttccttatt aaaagccctc
    22381 ttctccggga gaggctttcc cgtttcagcg tcccgctgaa atcatcggct tacctccttt
    22441 cgccctgaat gcagtctatc gctaacgcgt gaataaaata gtttcctctg tgattattgc
    22501 gtaacgactc gcaaagaata tttgctggca ggatcgcaga ctacaaagcc tac
//
LOCUS       DADKRT010000056        22454 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.056, whole genome shotgun sequence.
ACCESSION   DADKRT010000056 DADKRT010000000
VERSION     DADKRT010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22454
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.056"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            41..232
                     /locus_tag="JQ356_001804"
     CDS             41..232
                     /locus_tag="JQ356_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY4621919.1"
                     /translation="MKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGD
                     DDALKEILTHVTEATKKQH"
     gene            201..1307
                     /locus_tag="JQ356_001805"
     CDS             201..1307
                     /locus_tag="JQ356_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4621920.1"
                     /translation="MSPRPRKNSTDVAGLYEKFDRRTGRVYYQYKNPVTGKFHGLGTD
                     KGKAEKIASTANQRIAAAEAEYFMRKIDESPSATKRRGIRLKAWVDRYLKIQDTRLKN
                     GDIAATTHKEKTRMAAYLVSRLGNHPLKELEVRDFALILDEWLDKDMVSTARVNRGLW
                     VDIYKEAQHAGEVPPGWNPPEATRKPIPKVTRARLTMEDWQKIYNATPEKHFIRNAML
                     LAIVTGQRRDDICHMRFSDVWNEHLHITQGKTGMRLALPLTLRCDAIGITLKEVIDGC
                     RDRILSPYLIHSRHQKQPKPMSKDNLSDYFAKARDLAGIIPPAGKTPPTFHEQRSLSE
                     RLYRAQGIDTKTLLGHKVQATTDRYNDTRGQEWV"
     gene            1487..2281
                     /gene="potC"
                     /locus_tag="JQ356_001806"
     CDS             1487..2281
                     /gene="potC"
                     /locus_tag="JQ356_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HAY4621921.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMISPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
                     YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK"
     gene            2278..3324
                     /gene="potD"
                     /locus_tag="JQ356_001807"
     CDS             2278..3324
                     /gene="potD"
                     /locus_tag="JQ356_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HAY4621922.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
                     QFTKETCIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK
                     GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
                     SIYEEYYQKLKAGR"
     gene            complement(3480..4301)
                     /gene="cobB"
                     /locus_tag="JQ356_001808"
     CDS             complement(3480..4301)
                     /gene="cobB"
                     /locus_tag="JQ356_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HAY4621923.1"
                     /translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
                     KIQPNAAHLALAKLQEALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
                     VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL"
     gene            complement(4317..5228)
                     /gene="nagK"
                     /locus_tag="JQ356_001809"
     CDS             complement(4317..5228)
                     /gene="nagK"
                     /locus_tag="JQ356_001809"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HAY4621924.1"
                     /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC
                     ELVAEADQRFGCRGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL
                     DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL
                     PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQQLQAPEIIALYNQG
                     DEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPV
                     ARVPRIERARHGDAGGMRGAAFLHLTD"
     gene            complement(5257..6501)
                     /gene="lolE"
                     /locus_tag="JQ356_001810"
     CDS             complement(5257..6501)
                     /gene="lolE"
                     /locus_tag="JQ356_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HAY4621925.1"
                     /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTG
                     LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
                     KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG
                     SSVSGIALKMTDVFNANKLVRDAGEMTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
                     LIIGVVVSLQLTPIIERIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            complement(6501..7202)
                     /gene="lolD"
                     /locus_tag="JQ356_001811"
     CDS             complement(6501..7202)
                     /gene="lolD"
                     /locus_tag="JQ356_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309522.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HAY4621926.1"
                     /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            complement(7195..8394)
                     /gene="lolC"
                     /locus_tag="JQ356_001812"
     CDS             complement(7195..8394)
                     /gene="lolC"
                     /locus_tag="JQ356_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HAY4621927.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV
                     LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
                     QIRMMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGN
                     ITGWRLWLDEPLKVDSLSQQKLPEDSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMIFMVQGASAGIIGAILGAALGA
                     LLASQLNNLMPIIGVLLDGAALPMAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            8656..9729
                     /locus_tag="JQ356_001813"
     CDS             8656..9729
                     /locus_tag="JQ356_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HAY4621928.1"
                     /translation="MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFPHPLSEVLS
                     KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW
                     LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF
                     SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR
                     RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN
                     TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL
                     SQRAFSDLLFSPPSLPAAVSYSR"
     gene            9857..13303
                     /gene="mfd"
                     /locus_tag="JQ356_001814"
     CDS             9857..13303
                     /gene="mfd"
                     /locus_tag="JQ356_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HAY4621929.1"
                     /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
                     RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
                     EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
                     PRVQLKTKHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
                     GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLL
                     GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
                     RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
                     LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIE
                     FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA
                     IA"
     gene            13447..14409
                     /gene="ldtC"
                     /locus_tag="JQ356_001815"
     CDS             13447..14409
                     /gene="ldtC"
                     /locus_tag="JQ356_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtC"
                     /protein_id="HAY4621930.1"
                     /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN
                     KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE
                     GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN
                     TRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
                     RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI
                     TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL"
     gene            complement(14492..14749)
                     /gene="bhsA"
                     /locus_tag="JQ356_001816"
     CDS             complement(14492..14749)
                     /gene="bhsA"
                     /locus_tag="JQ356_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple stress resistance protein BhsA"
                     /protein_id="HAY4621931.1"
                     /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAG
                     TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK"
     gene            14990..15622
                     /gene="comR"
                     /locus_tag="JQ356_001817"
     CDS             14990..15622
                     /gene="comR"
                     /locus_tag="JQ356_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HAY4621932.1"
                     /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA
                     AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE
                     IPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK"
     gene            complement(15684..16223)
                     /locus_tag="JQ356_001818"
     CDS             complement(15684..16223)
                     /locus_tag="JQ356_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HAY4621933.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
                     PGTQIPLDSNGQLILNNKV"
     gene            complement(16450..17754)
                     /locus_tag="JQ356_001819"
     CDS             complement(16450..17754)
                     /locus_tag="JQ356_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY4621934.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE
                     RILPALPPRISAAAHSELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
                     KAPDFLKDIGGLETNRINQLVVEPTLQTTHDPDIYAIGDCASCTRPEGGFVPPRAQAA
                     HQMATCAMNNILAQINGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
     gene            complement(18154..18696)
                     /locus_tag="JQ356_001820"
     CDS             complement(18154..18696)
                     /locus_tag="JQ356_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY4621935.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(18719..19744)
                     /gene="nagZ"
                     /locus_tag="JQ356_001821"
     CDS             complement(18719..19744)
                     /gene="nagZ"
                     /locus_tag="JQ356_001821"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HAY4621936.1"
                     /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPEKALAIASRFIDGMHEAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPAHVIYSD
                     VDPRPASGSSYWLKTVLRQELCFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKASSTRLNQLHERW
                     QEEKAGH"
     gene            complement(19755..20579)
                     /gene="thiK"
                     /locus_tag="JQ356_001822"
     CDS             complement(19755..20579)
                     /gene="thiK"
                     /locus_tag="JQ356_001822"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HAY4621937.1"
                     /translation="MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
                     RFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPD
                     TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP
                     LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDTALELAAVWVENTEQHRQLVNDYA
                     TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
     gene            complement(20563..21201)
                     /gene="lpoB"
                     /locus_tag="JQ356_001823"
     CDS             complement(20563..21201)
                     /gene="lpoB"
                     /locus_tag="JQ356_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HAY4621938.1"
                     /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ
                     PVPTVPSVPTIPQQPGPIEHEDRTAPPAPHIRHYDWNGAMQPIVSKMLGADGVTAGSV
                     LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT
                     RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQ"
     gene            complement(21215..21592)
                     /locus_tag="JQ356_001824"
     CDS             complement(21215..21592)
                     /locus_tag="JQ356_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HAY4621939.1"
                     /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
                     SAEKPVLSTSDIQPSASSTLYNERQKPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH
                     SAVTLYGSANFLGAHKVRLYLYL"
     gene            complement(21595..21954)
                     /gene="hinT"
                     /locus_tag="JQ356_001825"
     CDS             complement(21595..21954)
                     /gene="hinT"
                     /locus_tag="JQ356_001825"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HAY4621940.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
                     NILIPTVNDVSAEHEQALGRMITVVAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
BASE COUNT         5592 a         5894 c         5576 g         5392 t
ORIGIN      
        1 cgacgagtgg aaaccaaaac ggttcagtct cactaccctg gtgaaatacg gaaaactagg
       61 atacatcgtt ccaagaccac aaaaaattcg tgggcgttgg ctgatagatc gccgagcagt
      121 atttgttggg ccaggtgaaa cgggaattgc gccggaaatt catactggcg atgatgatgc
      181 actgaaggag attttaactc atgtcaccga ggccacgaaa aaacagcact gacgtagccg
      241 gtctttacga aaagtttgat cgcagaactg gcagagttta ctaccagtat aaaaatcctg
      301 tgactggaaa atttcacgga ctcggaacag acaaaggtaa ggcagaaaaa atcgcttcca
      361 cagccaatca gcgaatagct gcagcagaag ctgaatattt catgcgcaaa attgatgaaa
      421 gtccgtcagc aacaaaacgt cggggtatca gattaaaggc atgggttgat cgatatctga
      481 aaatacagga cacgcgactg aaaaatggag atattgcagc tacaactcac aaagaaaaaa
      541 ctcgaatggc tgcatacctg gtttcccgtc tgggaaacca cccattgaaa gaactggaag
      601 taagagactt tgcattaata ctggatgagt ggctggataa agacatggtc agcacagcga
      661 gagtaaatcg tggattatgg gttgatattt ataaagaagc acagcatgca ggggaagttc
      721 ctcctggatg gaatcctccg gaggctaccc gtaaaccgat ccctaaagta accagagcca
      781 ggctcaccat ggaagactgg caaaaaattt acaatgcaac gcctgaaaaa cactttatcc
      841 gtaacgcaat gcttcttgcg attgttactg gtcagcgccg tgatgacatt tgccacatgc
      901 gtttttcaga tgtgtggaac gaacacttgc atatcaccca gggaaaaacc ggaatgcgtc
      961 tggcgttacc gcttacacta cgctgtgatg ccattgggat aacgttaaaa gaagttattg
     1021 atgggtgccg agacagaata ttaagtccat atctaatcca tagtcggcac cagaaacaac
     1081 cgaagccgat gagtaaagac aacctgagcg actactttgc caaagcacgg gatctggctg
     1141 ggataattcc accagcagga aaaactccgc caacatttca tgaacaacgc tctctatcag
     1201 aacggctgta ccgtgcacag ggtatcgata caaaaacatt actaggacat aaagtccagg
     1261 caaccaccga tcgctataac gatactcgag gtcaggaatg ggtttaagct ggttatttga
     1321 caaacaccat atggaatatc cgtcaccatc tcaggaaaaa agtgttgtaa aatgcgtggc
     1381 ctagttttgg ggaaacgttt tggagagatt ttggagaaag gaaaaaattg aataaattca
     1441 aaatcctgaa agtgctccac cttatgaata agaaggtgga actcgaatga tcggtcgact
     1501 gcttcgcggc ggttttatga ccgctatcta cgcgtacctg tatatcccaa tcattatttt
     1561 gattgtgaac tcctttaaca gctcgcgctt tggcatcaac tggcagggtt ttaccaccaa
     1621 atggtatagc ctgctgatga acaacgacag cctgttacag gcagcgcagc attcactaac
     1681 aatggcggtg ttttcggcga cgtttgctac gcttatcggt tcactgacgg cagttgcgct
     1741 gtaccgttat cgctttcgcg gtaagccgtt cgttagcgga atgctgtttg tggtaatgat
     1801 atcaccagat atcgtgatgg caatttcgct gctggtgctg tttatgctgc tgggtattca
     1861 gcttggcttc tggtcgctgc tgttctcgca tatcaccttc tgcctgccat ttgtggtggt
     1921 gacggtgtat tcgcgcctga aaggttttga cgtgcggatg ctggaagcgg cgaaagatct
     1981 cggtgccagc gaatttacaa ttctgcgaaa aatcatactg ccactggcaa tgccagcggt
     2041 ggcagcgggc tgggtgttaa gctttaccct gtcgatggac gatgtggtag tttcttcgtt
     2101 cgtcaccgga ccaagttatg aaattctgcc gttaaaaatt tattcgatgg tcaaagtcgg
     2161 cgtatcgccg gaagttaacg cgctggcaac catattactg gtgctgtcgc tggtgatggt
     2221 tattgccagt cagcttattg ctcgtgataa aacgaaaggt aacacagggg acgttaaatg
     2281 aaaaaatggt cacgccacct gctcgcggcg ggtgctctgg cactgggcat gagcgccgct
     2341 cacgccgatg acaacaacac gctgtatttc tacaactgga ccgagtacgt gccgccagga
     2401 ctgcttgaac agttcaccaa agaaacctgt attaaggtta tctattcgac ttacgagtcg
     2461 aacgaaacca tgtacgccaa gctgaaaacg tacaaagacg gtgcgtatga cctggtggtt
     2521 ccttcaacct attacgtcga taaaatgcgt aaagaaggga tgatccagaa gatcgacaag
     2581 tcgaagttaa cgaacttcag caatctcgat ccagacatgc tcaacaagcc ttttgacccg
     2641 aataacgact actccattcc gtatatctgg ggggcgacgg cgattggtgt taacggtgat
     2701 gcggtggatc cgaaatctgt caccagctgg gccgatctgt ggaagccaga gtacaaaggc
     2761 agcctgctgt tgaccgacga tgcccgtgaa gtgttccaga tggcgctgcg taagctgggc
     2821 tattccggta acaccaccga tccgaaagag attgaagctg catataacga gctgaaaaaa
     2881 ctgatgccaa acgtcgcagc gtttaactcc gataacccgg ctaacccgta catggaaggc
     2941 gaagttaacc tcggcatgat ctggaacggt tctgctttcg ttgcacgcca ggcgggtacg
     3001 cctattgacg tggtgtggcc gaaagaaggc ggcatattct ggatggacag cctggcgatc
     3061 ccggcaaatg ccaaaaacaa agaaggcgcg ctgaaattga tcaacttcct gctgcgcccg
     3121 gatgtggcaa aacaggttgc tgaaactatc ggttatccaa cgccaaacct tgcggcgcgt
     3181 aagctgttaa gtccagaagt ggcgaacgat aaaacgctct acccggatgc tgaaaccatt
     3241 aaaaatggcg aatggcagaa tgacgttggc gcagccagca gcatttatga agagtattat
     3301 cagaagctga aagcaggacg ttaattcagc aagcgggcgg tggtattacc gcccgttttt
     3361 tatttagcaa ggatgtggct aatgagtcag gacagtagag ttttatccga ctctttcgtc
     3421 ggtattgtgg tccgctcgta ggcctgataa gcgtagcgca tcaggcaatg cttcctgctt
     3481 tataatccct tcagcaactt ttcaacaaac tcaggcacca cctggcttgc cgggccgtaa
     3541 tatttctcgg caaattcatt accgacctga cttggttcga gattcagttc cacggtgtgc
     3601 gcgccatgca gtttcgcttc gtgaacaaac ccagccgccg gataaacatg cccggaagta
     3661 ccaatggcaa tgaaaatatc agccatcgac aacgccatat aaatttcatc catgccgagt
     3721 ggcatttcgc caaaccaaac gacgtgcggg cgcaagggtg ccgggaactg gcaacaatgg
     3781 catttatctt ctggcgtaac gtctccggtc cagtcgagaa cctgaccact ttgcgaacaa
     3841 cgaactttca gcaattcccc atgcatatga atgacattgg tattacctgc gcgttcatgc
     3901 aggttgtcta tattctgcgt taccagcaaa aagcgatcgc cgagagcctc ttgcagttta
     3961 gccagcgcaa gatgcgcggc gttaggctga atttttggct gctgcagctg tcgacgacgg
     4021 gcgttataaa acgcttgcac cagttcagga tcgcgatcga aaccttccgg cgttgccaca
     4081 tcttcaaccc gatgttcttc ccacaggcca tctgcggcgc gaaaggtacg aatacctgat
     4141 tccgcagaaa ttcctgcccc tgtcagtacg agtactcttg gtttttccat tgcttccggc
     4201 accactttat ctctgaaaaa aatacgctga cgcaaacgct cgcgcaggcg gcgtttattt
     4261 ttacgaaaac gacttaaccg atgaccccga cgcgacagca tagcaacctc tgttgtttaa
     4321 tcggttagat gtaggaaggc cgcaccacgc attcctcccg catcaccgtg gcgcgcgcgt
     4381 tcaatgcgcg gaacacgagc tacaggtaag agatgacgag gcagcctgtc cgccagttgc
     4441 gttgtgattg ccgggaaatt cgataagcca ccaccaatga cgaccaggtc agggtcaaca
     4501 atggtcagga tatttcccag acaaaccgct aataaatcca gataacgctc aacgtgcgcc
     4561 cttgcctgct catcgccttg attataaagc gcaataattt cgggagcctg caactgttga
     4621 tgataatagt gttgatacag ccacgcaaaa ccgcgaccag acagataatt ctcaatgcag
     4681 ccatgctgac cacagccgca gcggcgtaac gggaaatcca accccatcat ggttaacgca
     4741 tcaaccggca gacgcatatg gccaaactcg ccggtaatgt agcttttacc ggtaatcggt
     4801 ttgccgttga aaatcagccc accgccaacg ccggtaccaa gaatcaaccc catcaccagt
     4861 ggatattgcg taaattcatc atcccaggct tctgaaaggg caaaacagtt ggcatcgtta
     4921 tcaaggcgta catcgcgatc aagacgtgcg ctcaggtcgg cacgcagcgg tttaccgctg
     4981 gcagcgggga cattggcggc atacagcgta ccatcttctg tttccggcat tcccggtata
     5041 ccaatgccga cagaacctct acagccaaaa cgttgatcag cttcggctac cagctcgcac
     5101 actgcatcta aaaatgcgtc atagctgtca cgcggtgtcg gcacccgctt ttcccactgc
     5161 aactgccgac cgctatcaaa cacgccaagc gcaatttttg ttccaccaat atcaaacccg
     5221 taatacattg ccgctccttg ttttaatgta ctgcctttac tggccgctaa ggactcgcgc
     5281 agggtcaata ttactggcgc gccgcgccgg ataccaactt gccaaaagac tcagcaacaa
     5341 tgctgtgacc agtacgtaga agacgtccag ccagtgcaat tccgatggca ggaagtcaat
     5401 aaaatagata tcgctggaga ggaactgatg accgatcagc ttttcaatcc gctcaataat
     5461 cggggtaagt tgcagtgaaa caactacgcc gataatcagc ccacacaggc tgccgaacag
     5521 ccctgccagc aatccatacc agacaaagat ggcgcgaatt aaaccatctt tcgcccccag
     5581 cgttcttaat actgcgatat cgccactctt atctttcacc gccatcacta aggtggagac
     5641 gatgttgaaa caggccacgc caatcaccag taccatcgcc agatacataa tggcgcggat
     5701 catctggata tcgcgataca tatagccgta agtaccaatc cagcttttaa tataaacata
     5761 gctgttggtc atttcacccg catcgcgtac cagcttattg gcgttgaaaa catccgtcat
     5821 tttaagggca atacctgaca cgctggaacc catatcaaga tattgttggg catccgccag
     5881 cgggatcatg gcaaaactgt gatcgagttg gccactcaac tgcaaaatac ccgcaacgtg
     5941 caaacgcaca cgttttggct gcatcagttt atgctcagga ttcgagttgg ggatcatgat
     6001 cgacacccaa tcgccctgct tcactttcag cgcatccgcc acgcctttgc cgatgataat
     6061 ttgctgttcg cccgctttaa aattgcgcca cgcatccccc tgaacaaacg agggtaatgc
     6121 gctcagacgc tgttcctgtt gtgggttaac gcccttcacc tggattgcgc gcagattcgc
     6181 tccactttcc accagcccgg tgaaattgat atacggcgca gcggcggcaa tacccggcac
     6241 tttctgcact ttatccagtg cttcctgcca gttagtccat ggctgattta ccgcttcgat
     6301 ttcaccatgc ggcaccaccg ccagaatgcg gttattcagt tcgcgttcaa agccgttcat
     6361 cgcgcttaag ccgacgatca ataccgccac accgagggca atgccaatgg tagaaatgac
     6421 ggagatcagc gacaccatgc cgccgcgccg ccgtccgcga ctaaaacgca ggccaattaa
     6481 taacgataaa ggcatcgcca ttactccgcc cccatcaggc tcagttccgc cgtcagacgt
     6541 ccatcacgca tttctaactg gcggctcata cgtttcgcca gttgcaggtc gtgagtaacc
     6601 accaggaagg cggtgccctg caagcgattc aattccccaa gcaactggaa gatgctgtcg
     6661 gcgttacgcg catcgaggtt accggtaggc tcatccgcca gtaccagacg cggattattg
     6721 accagcgcac gggcaatcgc tacacgctgg cgttcgccgc cagaaagttc agatgggcgg
     6781 tgattcgcac gatgctccag ccccaccgct tttaacatct ccagtgcacg gctgttgatt
     6841 tcagcgggct ttttcttgcc aatcagcagc ggcatagcca cgttttccag ggcggtaaaa
     6901 tccggcagca ggtggtgaaa ctgataaata aagcccagtt tctggttgcg cagttctgct
     6961 tttgctgccg acgacagttt gctcatcggt tgaccgttaa agatcacatc gccggaggtt
     7021 ggcgtatcca gtccgcccag caggtgcagc aaggtgcttt taccggaacc agagctaccg
     7081 acgatcgcca tcatttcacc ttcgccgacg ctgaaactga cattgtgcag tacatcggtt
     7141 tgcacactgc cttcctgata gcgtttgcac aggttgtcgc attgcaacag gatcttattc
     7201 ataacgtaaa gcctcagcgg gttgtgtggc ggcagcgcgc catgaagggt aaagcgtaga
     7261 cagcagcgcg atagccatcg ccaccagcgc aataacaatg acctgtaaag gttcgatagc
     7321 catcggcagc gccgcgccat caagcaggac gccgattatt ggcatcagat tatttaactg
     7381 gctggcaagc agtgcgccaa gcgccgctcc gaggatcgca ccgataatcc cggcgctggc
     7441 cccttgcacc ataaagatca tcatgatttg tcgcggagtt aagccttgcg tttgcaggat
     7501 cgctacttcg ccctgcttct ccatcaccat cagccccagc gaggtaataa tgttaaacgc
     7561 cgcaacggcg acaatcaggc tcagcagtaa acccatcata tttttttcca tgcgtacggc
     7621 ctggaacaac tcgcctttac gatcacgcca gtcctgccat ttgctgtctt caggcagttt
     7681 ttgctgactt aatgagtcga ctttcagcgg ctcatccagc cacaaacgcc agccggtaat
     7741 attgcctgcc ggataacgca tcagacgcga ggcatcctca atattcacca gcatttcatt
     7801 gccatcgact tcactgttgg cggcgaaagt gccaatcaca ttgaacaggc gctgacttgg
     7861 aatacgcccc atcggcgtga actggctggc agatggtacc atcatgcgga tttgatcacc
     7921 gcgattaacg cctagctgtg aggcaagttg ttcgccgagg atgacattat atttccccgg
     7981 ctcgaggtca gtttgtttca cattgaccag atacggcgtt agtggatctt tttgcgccgg
     8041 atcgataccc agcatcaccc cgaccgccac gctgcgcgcg ctttgcagta ccacatcacc
     8101 ggtagtaata ggtgcgacgc gattaacgcc gtccagtttg actgccgttt ccgggagttg
     8161 ctgcgggtta agagagccat gctcagaaga gagaattgcc tgtggcatca ggccaaggat
     8221 gttgttttgc agctcgcgct caaagccgtt catcactgac aatactgtga ccagcgccat
     8281 caccccgagg gtaatgccga tggtagaaag ccaggagacg aaacgaccga agcgatccgc
     8341 tgcacgccca cgcatgtaac gcaggccaat aaatagagcg acaggttggt acatgaaatc
     8401 cgtctggttg ctgtagcaaa gacacgagta tataagcgaa agcaagatgg gtaaacgtct
     8461 gaactgtaag tgatcgtcag ggctaatctg aaaagccccc gtaaatcaat cggctaaatt
     8521 gccatgtttt atcatcaatc ttgccgcctg atcttaatct gaaaaatcat ccaatacaga
     8581 cagataccca ttacacctcg ggtcataacc cgcaggatca accgcatgta aattaaaaaa
     8641 gagcgtgttg tcctgatgaa acaaaaagag ctatggatta accagatcaa agggttatgt
     8701 atttgtccgg tggtgattta tcactcggtc attacctttt atccgcatat gaccactttt
     8761 ccgcatccgt tatcggaagt cctgagcaaa tgctggatct atttcaatct ttaccttgca
     8821 ccctttcgta tgccggtttt tttctttata tccggctatt tgattcgccg ctatatcgac
     8881 agcgtaccgt ggggaaattg tctcgataaa cggatctgga acatcttctg ggtgctggcg
     8941 ctttggggcg tggtgcagtg gctggcgtta agtgcgctga accagtggct ggcacctgag
     9001 cgcgatttaa gcaatgcctc caatgccgct tatgccgatt ccaccggtga gttcctgcac
     9061 gggatgatca ccgccagcac cagcttgtgg tatctgtatg cgttaattgt ctatttcgtg
     9121 gtatgtaaaa tttttagccg tctggcgctg ccactattcg ccttgtttgt actgctgagt
     9181 gtggcggtta atttcgttcc cacgccgtgg tggggaatga acagtgtgat ccgcaatttg
     9241 ccttattaca gccttggcgc atggtttggc gcaacaataa tgacctgtgt taaagaggta
     9301 ccgttgcgcc gccatctgct gatggcttct ttgcttaccg ttctggcggt cggtgcctgg
     9361 ttgtttacta tctcgctgct gttgtcgctg gtatcgattg tggtgatcat gaagctgttt
     9421 tatcagtacg agcaacgatt cggtatgcgc tccaccagcc tgctgaatgt gattggctcc
     9481 aacaccattg ctatctacac cacccatcgc attctggttg aaatattcag cttaactctg
     9541 cttgcgcaaa tgaacgcagc acgctggtcg ccgcaagtcg aactgacact cctgctggtt
     9601 tatccctttg tcagtttgtt catctgtact gttgcgggct tgctggtaag aaaactttca
     9661 cagcgtgcat tcagcgatct gttgttctcc ccgccttcac tgcccgctgc cgtcagttac
     9721 tcccgctaag ccatcgcccc agccggggcg attcaatttg ctaaaccatg tcgattacgg
     9781 ataatgaaca gcattgctta tcagagatat gcccccatat gttgaggcat atcctaacga
     9841 gaatctgaca accgttatgc ctgaacaata tcgttatacg ctgcccgtca aagcgggtga
     9901 gcagcgtctg ctgggcgagt taaccggcgc agcctgtgca acgctggtag cggaaattgc
     9961 cgaacgtcac gccggtccgg tggtactcat tgcaccagat atgcaaaatg ctctgcgttt
    10021 gcatgatgaa atcagtcagt tcaccgatca gatggtgatg aatctggcgg actgggaaac
    10081 tcttccctac gacagctttt cgcctcatca ggacattatc tcctcgcgcc tttccaccct
    10141 ttaccagcta ccgacgatgc agcgtggcgt actgattgtt ccggtgaata cgcttatgca
    10201 gcgcgtttgc ccacacagtt ttctccacgg tcatgcgctg gtgatgaaaa aaggtcagcg
    10261 cctgtcacga gatgcattac gaacccaact ggacagcgcc ggttatcgcc atgttgacca
    10321 ggtgatggag cacggcgaat acgccacgcg cggcgcgttg ctggatctct tcccgatggg
    10381 gagtgagctg ccttatcgtc ttgatttctt tgatgatgaa atcgacagcc tgcgggtgtt
    10441 tgacgtcgac agccagcgca cgctggagga agtagaagcg atcaatctgc tgcccgcgca
    10501 cgaatttccg accgataaag cggcaattga actgttccgc agccagtggc gcgatacctt
    10561 cgaagtgaag cgcgatccgg aacatattta ccagcaagtg agtaaaggca cattacctgc
    10621 cgggatcgag tactggcagc cattgttctt cagcgaacca ctgccgccgc tgttcagtta
    10681 tttccctgcc aataccttgc tcgtgaatac tggcgatctg gaaaccagtg ccgaacgttt
    10741 ccaggctgac acgctggcgc gttttgagaa tcgcggcgtc gatccgatgc gcccgctgtt
    10801 gccaccacaa tcgctctggc tgcgggtgga cgagctcttc tcagagctga aaaactggcc
    10861 ccgggtgcag ctaaaaacta aacatttacc gacaaaagcc gcgaatgcca atttaggttt
    10921 ccagaaactg ccagacctag ccgttcaggc gcaacaaaaa gcgccgctgg atgcgctgcg
    10981 taagttcctc gagactttcg acggtccggt ggtgttctcg gtagaaagtg aaggtcgccg
    11041 tgaagcgctg ggtgaactgc tcgcacgaat taaaattgct ccgcaacgca ttatgcgtct
    11101 tgatgaagcc agcgaccgtg ggcgttatct gatgattggc gctgccgaac atggttttgt
    11161 cgataaggtg cgtaatctgg cgctgatctg cgaaagcgat ctgctcggtg aacgtgttgc
    11221 ccgccgtcgt caggattctc gccgcaccat caaccccgat acactgatcc gtaaccttgc
    11281 ggagctgcat attggtcagc cggtggtcca tctggagcac ggtgtcgggc gctatgccgg
    11341 aatgaccacg ctcgaagcgg gcggcattac tggcgagtat ttgatgctca cctatgccaa
    11401 cgacgccaaa ctgtatgttc cggtgtcgtc actgcatctg attagccgtt acgcaggtgg
    11461 cgcggaagaa aacgccccgc tgcataaact tggcggcgat gcgtggtcac gcgcgcggca
    11521 gaaagcggcg gaaaaagtgc gtgatgtggc ggcggaattg ctggatatct acgcgcaacg
    11581 cgccgccaaa gagggcttcg cgtttaaaca cgatcgtgag cagtatcagt tgttctgcga
    11641 cagcttcccg tttgaaacca cgccggatca ggcgcaggcc attaatgcgg tacttagcga
    11701 catgtgtcag ccgctggcaa tggatcgtct ggtgtgcggc gatgttggct ttggtaaaac
    11761 agaagtggcg atgcgcgccg ctttcctggc agtagataac cacaagcagg tggcggtgtt
    11821 ggtgcctacc acccttctcg cgcagcagca ttacgacaac ttccgcgacc gtttcgccaa
    11881 ctggccggta cgtatcgaaa tgatctcccg tttccgcagc gccaaagagc agacgcaaat
    11941 ccttgcggaa gtggcggaag ggaaaatcga tattctgatc ggtacgcaca aactgctgca
    12001 aagtgacgtc aagtttaaag atttaggcct gctgattgtc gatgaagaac accgcttcgg
    12061 ggtgcgtcat aaagagcgca ttaaagcgat gcgcgcgaac gtggatattc tgacgcttac
    12121 tgcaacgccg atcccacgca cgctgaatat ggcaatgagc ggaatgcgtg acctgtcgat
    12181 tatcgccacg ccgcccgccc gtcgtctggc agttaaaacc tttgtccgtg agtatgacag
    12241 cctggtggtc cgggaggcga tcctgcgtga aattttgcgc ggggggcagg tttattatct
    12301 ctacaatgat gtggaaaaca tccagaaagc tgccgaacgg ctggcagaac tggtgccaga
    12361 agcgcggatc gccatcggtc acgggcagat gcgcgagcgc gaactggaac gggtgatgaa
    12421 tgatttccat catcaacgtt tcaacgtgct ggtttgtaca accattatcg aaaccgggat
    12481 cgacatcccg acagccaaca ccattatcat tgaacgcgcg gatcacttcg gtctggcgca
    12541 gctgcaccag ttacgcggtc gcgtcggacg ttcacatcat caggcatatg catggctgct
    12601 gacgccgcat ccaaaagcga tgactaccga tgcacaaaaa cgtcttgaag cgattgcctc
    12661 gctggaagat ctcggtgcag gctttgcgct ggcaacgcac gatctggaga tccgcggcgc
    12721 gggtgaactg cttggcgaag aacaaagtgg ctcaatggaa accatcggtt tctcgctgta
    12781 tatggagttg ctggaaaacg ccgtcgatgc actgaaagcc ggacgcgagc cgtcgctgga
    12841 agatctcacc agccagcaaa cagaagtcga gctgcggatg ccgtcgctat tgccagatga
    12901 tttcattcct gacgtgaata cgcgtttgtc gttctataaa cgtattgcca gcgccaaaac
    12961 ggaaaacgaa ctggaagaga tcaaagtcga gcttatcgat cgcttcggcc tgctgccgga
    13021 tccggcgcgt accctgctgg atgttgcccg tctgcgccag caagcgcaga aactggggat
    13081 caggaagctg gaaggtaatg agaaaggcgg ggtgatcgaa tttgccgaga agaatcacgt
    13141 taatccggcc tggttgattg gtttgctgca aaaacagccg cagcattacc gccttgatgg
    13201 tccgacgcgc ctgaaattta ttcaggattt gagtgagcgg aaaacgcgta tcgaatgggt
    13261 acgccagttt atgcgtgaac tggaagagaa cgcgatcgct taatggtaaa tcgggggcgt
    13321 ttctgcgccc ccatcggcaa catttacaaa ttctttgcac ttccctgcac tatccgacac
    13381 tgtcaccatc cataattcag gcttatctgt ttattacaat aaccttatat ttattatgga
    13441 tttttggtga tgatcaaaac gcgtttttct cgctggctaa cgttttttac gttcgccgct
    13501 gccgtggcgc tggcgctacc ggcaaaagcc aacacctggc cgctgccgcc agcgggcagt
    13561 cgtctggttg gcgaaaacaa atttcatgtg gtggaaaatg acggtggttc tctggaagcc
    13621 atcgccaaaa aatataacgt cggctttctc gctctgttac aggctaaccc cggcgttgat
    13681 ccttacgtac cgcgcgcggg cagcgtgtta acgatcccgt tgcaaaccct acttccagac
    13741 gcgccgcgcg aaggcattgt gatcaacatt gcggagctgc gtctctatta ctacccgccg
    13801 ggtaaaaatt cggtaaccgt gtatccaata ggtattggtc agttaggtgg tgacacgctg
    13861 acaccgacaa tggtgaccac cgtttcagac aaacgtgcaa acccaacctg gacgccaacg
    13921 gcaaacaccc gcgcccgtta taaagcacag ggaattgagt tgcctgcggt agtgccggct
    13981 ggaccggata acccaatggg ccatcatgcg attcgtctgg cggcctatgg cggcgtttat
    14041 ttgcttcatg gtacgaacgc cgatttcggc attggcatgc gggtaagttc tggctgtatt
    14101 cgtctgcggg atgacgatat caaaacactc tttagccagg tcaccccagg caccaaagtg
    14161 aatatcatca acactccgat aaaagtctct gccgaaccaa acggtgcgcg tctggttgaa
    14221 gtacatcagc cgctgtcaga gaagattgat gacgatccgc agctgctgcc aattacgctg
    14281 aatagcgcaa tgcaatcatt taaagatgca gcacaaactg acgctgaagt gatgcaacat
    14341 gtgatggatg tccgttccgg gatgccggtg gatgtccgcc gtcatcaagt gagcccacaa
    14401 actctgtaaa tcctggataa aaaaaatccc cgcgacacgg catgtcgcgg ggaaaaaatc
    14461 agcagtagca ggcattaatg agggttaatg cttatttata aattactgct gttccatgga
    14521 gggtattcgg accggttaca gaagtaatac ggaaagattt tgcacccatc tcatccgctt
    14581 tttgcgccag ctgctcttcc agcgatccca gatttgtccc cgctttagca ctgattgtac
    14641 cgactttttg ttggccttct ggcgttgact gaacttcgac agccgcaaag ctggcaaatg
    14701 acatggagct taaaatcgcc gcagcgatga gggtttttac gtttttcata atagtggcct
    14761 tatgcagatg aatgacgtcg caagcaatta cttaacgatc gataactaaa tgacagatgt
    14821 gatctggatc acatacaaga tattttttat aacaatcatt aattaattta aaaatcttta
    14881 aatttcagtt aaatagaaag caattatttt tatgggatct ggactggtga acggaggtga
    14941 ttatttttat aataatcttt cattcacagt caccaggtac aacggcatca tggcaactga
    15001 ctcaacacaa tgtgtaaaaa aaagccgtgg ccgcccaaaa gtgttcgaca gggatgccgc
    15061 gcttgataag gccatgaaat tgttctggca acacggttat gaagcgactt ctcttgcgga
    15121 cctcgtcgaa gcgaccggag ccaaagcgcc cacgctatac gcggaattta ccaacaaaga
    15181 ggggttattt cgtgccgttc tcgaccgcta tatcgatcgt tttgccgcta agcatgaagc
    15241 acagctgttt tgtgaagaga aaagcgtgga gtctgcgctg gctgactatt ttgctgccat
    15301 cgccaactgc tttaccagca aagacacccc ggcaggctgc ttcatgatca acaactgcac
    15361 caccctctcc ccagattcag gagatatcgc caatacgttg aaatcacgcc atgcgatgca
    15421 agagcgcact ttgcagcagt ttttatgtca acgacaagcg cgcggggaaa tcccgaccca
    15481 ctgtgacgtg acacatctgg cagaattcct taattgtatt attcagggga tgtcgatcag
    15541 cgcacgcgaa ggtgcatcgc tggaaaaact aatgcagatt gccggaacga ctttgcgttt
    15601 atggcccgaa ctggtgaaat aagtcgcaaa aaaagcccct cagcctgagc gaatgagggg
    15661 ccaaattgca gagtacagcc ttgttatact ttgttattca aaatcagttg cccattacta
    15721 tctagcggga tctgcgtacc cggatcgcgg tccatgcgga ttttgccctg ctgatcgcca
    15781 atcttatagg tcacatcata accgagcatt ttttctgact tgtcatacac cgttttacaa
    15841 cgctgttgcg tagtcgtgta agtatcgctt tcctggagag agccctggat ctggttaccg
    15901 gcatatccac cacccagcgc ccccacaaca gtggcgacat ctttaccgcg accaccgcca
    15961 aactgatgcc ctatcacgcc gccagcaaca gcgccgagca ccgacccggt aatgcgattt
    16021 tcatcctgca ccggtcgacg atgggtcact gtgacgttgc gacactcctg acgcggtgtt
    16081 ttaaccgttt ccttgattgg ggttgcagaa acaacctgag cgtattgcgg gccacgttca
    16141 aacacgttca gactggccac tgccgctacg cccagcgcag ctgcgacacc aatcccgata
    16201 cccgccaaca ttgatttatt cacgggaaca cctccttctt tgcagttatg ccaatcatgc
    16261 aagcgaagga gaaaagcagc tatcagacag aagatgaaaa gcgcgggaat ggctggaaat
    16321 acttaatgat tcggaggagt ctgaaggaat gcctgatgcg acgcttaacg cgtcttatca
    16381 ggcctaccgc tcgtaccatt tgtccagggc ggatgaggcg tttatgccac atccgccagt
    16441 gtacgtcgat taatgcaact tcaaacgcgg acggataacg cggttaatac tccccaccag
    16501 catcattaat ccggttttaa agtaaccatg cagcgcaatc tgatgcattc ggtatagcga
    16561 gatatataca aagcgcgcaa ttcgtccttc aatcatcatt gagccgcgcg tcaagttacc
    16621 catcaggcta ccaacggtgg agaagttcga cagcgatacc agtgaaccat gatctttata
    16681 ctgataattt ttcagcggct taccgtttat ctgcgccaga atattgttca ttgcgcaagt
    16741 cgccatctgg tgtgcagcct gagcacgcgg tggaacaaag cccccttccg gacgcgtgca
    16801 tgacgcgcag tcgccaatag cgtaaatgtc tggatcgtgg gtggtttgca gcgtcggttc
    16861 caccaccagc tggttgatac ggttagtttc aagaccaccg atatctttca ggaagtctgg
    16921 cgctttgatc ccggctgccc acaccatcag atcagcctca atatattcac catctttagt
    16981 gtgcaggccg ccttcatcag cactggtgac catggtttgc gtcagcacgc gaacgccaag
    17041 tttcgttaac tcactatggg ccgcagcaga gatgcgtggc ggtaatgcag gcaaaatacg
    17101 ttctcccgct tctactagcg ttacgttcag ggcttcgttg gtcagacctt tataaccgta
    17161 gctgtgcagt tgcttgaccg cgttatgcaa ctcagcggag agttctacac ccgtcgcgcc
    17221 gccaccgaca atcgcaatgt tcactttgcc attcgcgccc aggttggcgg agtatttcag
    17281 gaacagattc agcatctcct ggtggaagcg acgcgcctgg tgcgggttat cgaggaaaat
    17341 gcagttctct ttgacgcctg gcgtattgaa atcgttagag gtgctaccca gcgccatgac
    17401 cagggtgtca taggcgattt tacgttccgg aaccagcagt tcacctttct cgtcgcgtag
    17461 ttctgcaata gtgattgttt tcgcttcacg atcaatatca atgacggaac ccaactggaa
    17521 ctggaaacca tgattgcgcg catgggccag atagctcaac gcatcgacgc cttcatcaag
    17581 cgagccagtc gccacttcgt gcagcagcgg tttccacagg tggctgtggt tacgatcgac
    17641 cagcgtaatt ttggcttttt tcttacgtcc cagcttatgc cccagctgtg ttgccatttc
    17701 cagcccacca gcaccgccgc cgacaatcac aatctttttc aatggcgtag tcaacgtgac
    17761 ccccttgaat ttattaacca attgttaatt aatggttatt aacatagctc ttaattaaca
    17821 acaggttaca gcaatgaaaa tgttcttcgc tattgagaat aacatgaatg gtgcattggt
    17881 cataccaaaa ttgatgttaa tcaagttttg ttgctgaaaa gataggcgac tttaccgggt
    17941 gagatcaaaa aatagagttt attgtttatt atttgagcga atttgtgaga gtgatataga
    18001 gtgaggggtg tatgcagggc gttcggtagg cctgataaga ggcgcatcag gcattgatgc
    18061 tcgactgtcg gatgcggcgt aaacgcctta tccgacttac agaattcgga gcgcatcagg
    18121 taccggcaag gttacctgat gcgacgaggg catttacccg agggttttga acgctttaat
    18181 gcgctgcaaa tgcggggaga tattcttgaa tttgtgcgtc tgctcttcgt cccagacaat
    18241 ctcgtaataa tgatgcaact cttcagatgt ccgctggctg ttaagcgctt catcattacg
    18301 cgacaaaatc accaggcaac gatcgcgatt cttctcgcgg aagttggtca cacacttagt
    18361 ggcaatatcg gcatactctt ccgggcgatc aatcttgcct tccatgttct cataagggaa
    18421 caaattaggg ttgaagatca cctggcggat atcgcaaaga aaaccaatcc gttccgccca
    18481 gtatccgccc agaccaacgc cgcaaatcag cggacgctcg tcgacgttca gttgcaacat
    18541 tttgtccact tctttaagca gatgctgcat atcatgtttc ggatgccgcg tactgtagct
    18601 tatcaagcgt acatccgggt caataaactg caattgtaag actttctcgt ggttacccgg
    18661 actgttagag tcaaaaccgt gtaaatagat aatcatcgct tcctcacata agccagggtt
    18721 agtgacctgc tttctcttcc tgccagcgtt catgtaactg attcagacgg gtgctgctcg
    18781 ccttccagcg agccgagtcc atcagttcct gtcgcgaaaa tgaaccttta tgatacaaac
    18841 gtgtaacacg ttctgccttg atcggtgaca gattatctaa cacgctgacg gcccctttac
    18901 gattattgca gaccaggatc atatcgcaac ctgcgtccag tgatgcctgc ccgcgttcgg
    18961 cataactgcc cataatcgcg gcaccttcca tcgataaatc gtcagagaaa attacaccgt
    19021 caaaacacag ttcctgacgc aaaacggttt tcagccagta agaagaaccg ctcgccggac
    19081 gcggatcaac atcactgtag atcacatgcg caggcataat ggcgtcgagt ttattttcgc
    19141 ggattaacgt gctgaaaacc gacatatctt tggcacgaat ttccgcttgc gggcgtgggt
    19201 cgcacggcgt ctctttgtgt gaatctgcag ttactgcacc gtgtcctggg aagtgtttcc
    19261 cggtcgtttt cattccggct tcatgcatcc catcaataaa ccgactagcg attgccaggg
    19321 ctttttctgg gtcggcatga taagaacgct cgccaatcgc cgcgctgata tgtcctacat
    19381 ccagcactgg cgcaaagctg atatcaatat ccatagcgat catttcgctg gccatcagcc
    19441 aacccgcctc ttgcgccagt ttgccgccct cttccattcc caacagcgca gcaaaggatt
    19501 gtgctgccgg taagcgggta aaaccttcgc gaaaacgctg cacgcgtcca ccttcctgat
    19561 ctaccgccac caccagatga ttgcgcgatg ctgcgcggat ctggcgcacc agttcacgta
    19621 actgggcagg atcatgatag ttacgcgtaa agagaatcag ccctcccacc agcggatgcg
    19681 ccagtatttc acgctcttcc gcgtccagtt cataaccttc gacatccaac attactggac
    19741 ccacactgct ctccttattg ttttattaat agctgccgcc aggtgtcatc ggccagcctg
    19801 ataaattgtt gatcgccggt ttgtcgccag cggtactcaa accaccctgc tttgagcatc
    19861 agcagccagg gaaaccatcg cctgacctga cgccataatt gcgccggata aatcttcgcg
    19921 cgagtggcat agtcattgac caattgccgg tgctgttcag tattttccac ccacaccgcc
    19981 gccagttcca gcgcggtatc accatctccg gcatactccc agtcgatgag ttttaaccct
    20041 gatgcgctat gcactaaatt tccggcgtgg acatccatat gcaatggact taagcgtaaa
    20101 ggtcgtggtt cccgcgcttt gcgcagacgt tttaacattc gcagccaacc cacagtccgc
    20161 cgcgccggat cgctttgctg ccagtacagt tccagtaacg gcaacagcgt tattcgccag
    20221 ccaaaacgtg gttgttgatg tagataatac agcaagcctg ccagttcgtt ggtatccggc
    20281 aaatacgttt ttaccgcgcc gggcagatag tcgactacca tccagtcacg gagatataaa
    20341 tgcggcttcg gtgcaatgct tgcgggtagt tgtgataaag cccgatactg gcgcaagaac
    20401 gcggactgcg gcgcatcagg atcgtgcggc tgacgcacaa caaaacgctg gccctgatgt
    20461 tcaatgagaa aactaccgcc actaagccca ctattaaacg tcgtgacggg atgaaactgc
    20521 gggaaaaagc gcgacagcaa ttcgtcgcgc gtgatgggat tattactgcg aaacggcacc
    20581 tttacctgac cagataattt cgcccgtctg caccagcatc agctgcattt gtagggtcgg
    20641 agcgttaacg ttgccagagg cgctggagta cagcacgtaa tgagcgccga cattgcgggc
    20701 aatgcctatg gctttactac gggtgcctaa actgtcctgc ggcgacaaac ctaactgttg
    20761 cttagccatc gacagttgct gggcggaaac cagggtaaat ttcccgttat tagccagcgc
    20821 atttcgcagc gtttcggtcg cttctgcggc attcagcgaa ccgttagtac ggttgttaac
    20881 gctatcaacc agcaggacgc tacccgcagt caccccgtca gccccaagca tcttactgac
    20941 tatcggctgc attgcgccat tccagtcata atggcgaata tgcggcgcag gcggtgccgt
    21001 tcgatcttcg tgctcaattg ggcctggctg ctgcgggatc gtcggcaccg agggcactgt
    21061 ggggacaggc tgttgtggct cggctggttg ttccggcgct ggtttcactt cttctaccgg
    21121 tgcaggttca cgttgcccca cacacccggc gagaaacatc gccagcgcgg taatcaaggc
    21181 gtagcgactc atttttgtca tcaagattca ccccttacaa atatagataa agtctgactt
    21241 tgtgcgcccc cagaaaattg gcgctgccgt acagcgttac cgccgaatgt gcgggaatgg
    21301 taacgctgcg tggcctttcc agaggatgca tctccagccc tctggcgtca taccagtaaa
    21361 aacgataatg aacggtaacg ggtttttgcc tttcgttata aagcgttgag gatgctgaag
    21421 gttgaatatc agacgtcgaa aggacgggct tttctgcact gatgcccgca gccaataaag
    21481 atgactccat caccagcgat tgctcatcat tcaccggaat ttccggatgt gaacgacagc
    21541 ccaccagcag taacaacacc agagacacca gcccaaagca tccttttctc atcgttacag
    21601 acctttatgc gccagcattg gtcccagcgg acggccaccc aacaagtgca tatggatgtg
    21661 gtaaacctct tgtccgccat ggcggttggt attcatgatc agacgatagc catcttcggc
    21721 aataccttct tgctcagcaa tttttgccac tacggtgatc atgcgtccca gcgcctgctc
    21781 atgctcagct gagacgtcgt tcacagtcgg aatgaggata ttcggaatga tcagaatatg
    21841 cgttggcgct tgcggcgaaa tatcgcgaaa cgccgttacc agatcatcct ggtagacgat
    21901 atcggagggg atctcacgac gaataatttt gctgaatata gtttcttctg ccacgacatt
    21961 ttcctttttc aaatagccat gcgttgcgcc atgctacgcc gcgccacact gcgagtatag
    22021 agtatggtcg agttaaacct gctctttcaa ccttaactca cgatttctta agcaaaaaat
    22081 cgttttgctg ccgtatatat cgccattatt cccatttctg cctgcgaatg cgctgaaaag
    22141 acattctctg tttggtttac acgacaaata tgaatgcgta tatttctcat ttgcatttac
    22201 aaacaaaatt attcgcacac taaatataat cgctcatcac cctcctccgg catgagcctg
    22261 acgacaacat aaaccatgag atttcaaatg ctttcaacac aatttaacag ggataatcaa
    22321 tatcaagcca tcaccaaacc gtcactactt gccggttgca tagcactggc actattacct
    22381 tctgccgctt ttgctgcatc agccactgaa gaaacggtga ttgttgaggg ttcagccaca
    22441 gctccagatg atgg
//
LOCUS       DADKRT010000057        22280 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.057, whole genome shotgun sequence.
ACCESSION   DADKRT010000057 DADKRT010000000
VERSION     DADKRT010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22280
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.057"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(18..93)
                     /locus_tag="JQ356_001826"
     tRNA            complement(18..93)
                     /locus_tag="JQ356_001826"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(58..60),aa:His,seq:gtg)
     gene            complement(152..228)
                     /locus_tag="JQ356_001827"
     tRNA            complement(152..228)
                     /locus_tag="JQ356_001827"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(192..194),aa:Arg,seq:ccg)
     gene            complement(331..1716)
                     /locus_tag="JQ356_001828"
     CDS             complement(331..1716)
                     /locus_tag="JQ356_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY4621941.1"
                     /translation="MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAVGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNESGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVA
                     GVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA
                     IASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGL
                     NRHGKAHKLEE"
     gene            complement(1907..2647)
                     /gene="rffM"
                     /locus_tag="JQ356_001829"
     CDS             complement(1907..2647)
                     /gene="rffM"
                     /locus_tag="JQ356_001829"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HAY4621942.1"
                     /translation="MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAI
                     NAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMA
                     RAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASG
                     AQIVTVAMGSPKQEIFMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWL
                     YRLLSQPSRIKRQLRLLRYLRWHYTGNL"
     gene            complement(2650..4002)
                     /gene="wzyE"
                     /locus_tag="JQ356_001830"
     CDS             complement(2650..4002)
                     /gene="wzyE"
                     /locus_tag="JQ356_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen assembly polymerase"
                     /protein_id="HAY4621943.1"
                     /translation="MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPR
                     RPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTREVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG
                     "
     gene            complement(3999..5078)
                     /gene="rffT"
                     /locus_tag="JQ356_001831"
                     /gene_synonym="wecF"
     CDS             complement(3999..5078)
                     /gene="rffT"
                     /locus_tag="JQ356_001831"
                     /gene_synonym="wecF"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HAY4621944.1"
                     /translation="MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDD
                     GLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPS
                     QFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL
                     LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVP
                     MGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQG
                     IGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKN
                     TIAFFSPNYLQGWQRVLAIAAGEVA"
     gene            complement(5075..6325)
                     /gene="wzxE"
                     /locus_tag="JQ356_001832"
     CDS             complement(5075..6325)
                     /gene="wzxE"
                     /locus_tag="JQ356_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HAY4621945.1"
                     /translation="MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFR
                     QLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAA
                     APISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGV
                     LAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLS
                     KFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEVSQFTLLMVFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(6327..7457)
                     /gene="rffA"
                     /locus_tag="JQ356_001833"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(6327..7457)
                     /gene="rffA"
                     /locus_tag="JQ356_001833"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HAY4621946.1"
                     /translation="MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRP
                     DTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGR
                     IELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAGEHFG
                     EFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS"
     gene            complement(7462..8136)
                     /locus_tag="JQ356_001834"
     CDS             complement(7462..8136)
                     /locus_tag="JQ356_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-fucosamine acetyltransferase"
                     /protein_id="HAY4621947.1"
                     /translation="MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRV
                     QAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASA
                     AFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNA
                     TDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVEST
                     AYWLYR"
     gene            complement(8114..8995)
                     /gene="rfbA"
                     /locus_tag="JQ356_001835"
     CDS             complement(8114..8995)
                     /gene="rfbA"
                     /locus_tag="JQ356_001835"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY4621948.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLVQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDQERFGVVEFDDNFRAISLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKT
                     GYGQYLLELLRARPRQY"
     gene            complement(9014..10081)
                     /gene="rffG"
                     /locus_tag="JQ356_001836"
     CDS             complement(9014..10081)
                     /gene="rffG"
                     /locus_tag="JQ356_001836"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY4621949.1"
                     /translation="MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL
                     APVAQSDRFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYG
                     NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN
                     KPHGVVHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN
                     ESWWKQVQDGSYQGERLGLKG"
     gene            complement(10081..11343)
                     /gene="wecC"
                     /locus_tag="JQ356_001837"
     CDS             complement(10081..11343)
                     /gene="wecC"
                     /locus_tag="JQ356_001837"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HAY4621950.1"
                     /translation="MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
                     GEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAA
                     RSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNI
                     DDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVM
                     LVDHSQFKVINGDNVHQQYVVDAKGVWR"
     gene            complement(11340..12470)
                     /gene="wecB"
                     /locus_tag="JQ356_001838"
     CDS             complement(11340..12470)
                     /gene="wecB"
                     /locus_tag="JQ356_001838"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312746.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HAY4621951.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALAKAPFFEAKVCVTAQHREMLD
                     QVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN
                     VADSRIFITGNTVIDALLWVRDQVMSSDTLRSELVANYPFIDPNKKMILVTGHRRESF
                     GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVE
                     EVTRLLKDENEYQTMSRAHNPYGDGQACSRILEALKNNRISL"
     gene            complement(12526..13572)
                     /gene="wzzE"
                     /locus_tag="JQ356_001839"
     CDS             complement(12526..13572)
                     /gene="wzzE"
                     /locus_tag="JQ356_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HAY4621952.1"
                     /translation="MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA
                     LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK
                     EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS
                     VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA
                     IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP
                     AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG
                     LIGAGVALTRRCSK"
     gene            complement(13584..14687)
                     /gene="wecA"
                     /locus_tag="JQ356_001840"
     CDS             complement(13584..14687)
                     /gene="wecA"
                     /locus_tag="JQ356_001840"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HAY4621953.1"
                     /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQ
                     GLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRAT
                     IQAAVGIVMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK"
     gene            complement(14927..16186)
                     /gene="rho"
                     /locus_tag="JQ356_001841"
     CDS             complement(14927..16186)
                     /gene="rho"
                     /locus_tag="JQ356_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HAY4621954.1"
                     /translation="MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(16271..16372)
                     /gene="rhoL"
                     /locus_tag="JQ356_001842"
     CDS             complement(16271..16372)
                     /gene="rhoL"
                     /locus_tag="JQ356_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide rhoL"
                     /protein_id="HAY4621955.1"
                     /translation="MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR"
     gene            complement(16513..16842)
                     /gene="trxA"
                     /locus_tag="JQ356_001843"
     CDS             complement(16513..16842)
                     /gene="trxA"
                     /locus_tag="JQ356_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HAY4621956.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            16973..18238
                     /gene="rhlB"
                     /locus_tag="JQ356_001844"
     CDS             16973..18238
                     /gene="rhlB"
                     /locus_tag="JQ356_001844"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HAY4621957.1"
                     /translation="MSKTHLTEQKFSDFALHPKVVEILEKKGFHNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHA
                     DAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
                     IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD
                     LPKPLRLTRPRTGNGPRRTGAPRNRRRSG"
     gene            18372..19856
                     /gene="gppA"
                     /locus_tag="JQ356_001845"
     CDS             18372..19856
                     /gene="gppA"
                     /locus_tag="JQ356_001845"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HAY4621958.1"
                     /translation="MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAA
                     GLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQE
                     ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSL
                     SMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQAL
                     QEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIF
                     TELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVA
                     ANFFDQVEKEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPA
                     QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMT
                     LQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH"
     gene            complement(19903..21924)
                     /gene="rep"
                     /locus_tag="JQ356_001846"
     CDS             complement(19903..21924)
                     /gene="rep"
                     /locus_tag="JQ356_001846"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HAY4621959.1"
                     /translation="MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     ANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGER
                     DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGTELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKYYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY
                     EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
                     YVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK"
BASE COUNT         5594 a         6109 c         5543 g         5034 t
ORIGIN      
        1 gtcacaactt ctaataatgg ggtggctaat gggattcgaa cccacgacaa ctggaatcac
       61 aatccagggc tctaccaact gagctatagc caccactaca aatcttgtta cgcggtatta
      121 ctaccaccgc agctcaagcg ccgggactaa atggcgcgcc cgacaggatt cgaacctgag
      181 acctctgcct ccggagggca gcgctctatc cagctgagct acgggcgctt agcgccgttg
      241 cgggggtgga taatacggac ttcccacccc tctgtctagt ccctttttaa ataaattgcg
      301 cgtttggtta cggtttgtgc gttttgctgc ttattcctcc agtttatgcg ctttcccgtg
      361 gcgattaagg ccaaaaactt tataaatcgc cgtcaccgcc agcataaaga tgatgccaac
      421 aaacagcgac atacgcgtat cttcattaaa gtacatgccg atcaaaacgc aaatcaggaa
      481 tgccattgtt acgtagttgg cccacgggaa caggattgag cggaacggat ggctggcaat
      541 cgccgcttta tgtgcacgcc gaaaacgcag ctggcttatc aatatcacaa accatggcac
      601 catccccgga agcacgctgg cactgtagac gtagacaaac acacgctgcg gattgggaat
      661 gatgtagttc aggcatgagc caattagcag aatagcaata gatactgcca cacccgcaac
      721 tggtacgccg tgacgggaaa ctttcgccat cgccgccggt aactgacggt ttttcgccag
      781 tgcgtagagc atacgtccgc aactgtacat gccgctgtta cagccagaga gcgcagccgt
      841 cagcaccaca aagttgataa tgcccgccgc tgcggtaata ccgattttgg caaaagtcag
      901 tacgaacggg ctgccgttgc tgccactttc attccacggg aagatggtga cgataacgaa
      961 aatcgcgcct acgtagaaaa tcaggatccg ccacagcact ttgcctacgg cactgcgcaa
     1021 cgtcacctgc ggattcttcg cttcaccggc agtaatgcca atcagctcca cgccctggta
     1081 ggacgccacc acaatacaca gcgcggtcag gaaccctttc cagccacccg caaagaaacc
     1141 gccatgctct gtgagattgc taaaaccaat cgactgcccg ccattgccaa agccaaagaa
     1201 aatcacgccc aggccaatga caatcatcac gataatcgtg gtgactttga tcatcgcgaa
     1261 ccagaactcg atttcgccgt acaaccgcac cgccgccaga ttcgccaacg ccaccagcgc
     1321 cactgcgatc aatgcgggta tccactgcgc catctccggg aaccagaact ggacataaac
     1381 gccaacggcg gtgatttctg agatccccac cgccatccac ataaaccaat aagaccaggc
     1441 ggtgagataa ccaaagaacg ggctcatata acgatgcgca taaacggcga acgaaccggt
     1501 aaccggttcg aggaacaaca tttcgcccat tgaacgcatg atgaaaaaga cgaatagccc
     1561 ggcgatgata taggccaaca atacggatgg cccggcccat ttcaaggtac tggcggcccc
     1621 cataaacagg ccgacgccaa tggtgccccc cagggcgatg agttcgatat gtcgagcttc
     1681 cagcccacgc tgtagctctg gtttgttatc tgccataaat cctcgtgttg tgtttgcatg
     1741 ctttccggtg ttaccggtta tcgttatggg tacatcgagt gttgcgaatg ttttcgtaat
     1801 tcaggagaaa tggcaaataa agcattaaaa atttgaatgc tttgtgtaat aaaaaagcag
     1861 acaggcgacg gagtgaccac tccgtcgctt tacaaagaga ggaaaatcag aggttgccgg
     1921 tgtagtgcca gcgtaaataa cgcagcaaac gaagctgacg cttaatgcgg ctcggctgcg
     1981 aaagcaggcg gtagagccac tccagtccca gcgtttgcca gattttcggt gcgcgtttta
     2041 cgtgaccggt gaaaacatcg taagtcccgc caacgcccat atacagcgca tctggatgca
     2101 ccagacggca gtcgcgcatg aagatctcct gctttggcga tcccatcgca acggtgacga
     2161 tttgcgctcc gctggcatga atgcgttcaa acagcgcctg acgctgctcg ggtttaaaat
     2221 aaccatcctg actgccaacg atattcacat tccactggtt gcgcagttta gcttcagttt
     2281 gcgccagcac ttcaggttta ccgcccacaa gaaataccgg cgtcccttct ttgcctgcgc
     2341 gcgccatcag ctcttcccag agatcggcac cggcaacgcg ggaaacctgc gcctgcgggt
     2401 actttttacg tactgaacgt acaacgctga tgccatccgc atatttaaat tcggcagcgt
     2461 taattaactc cctgacctcg gcgttatctt caatggtcag cattttttca gcattaatgg
     2521 caaccagcgt tccctgctta agctgcccgt cagcaaacag ataatcgagg gcgtgctgca
     2581 tatcacgcca accaatcaac tgtaagccac gcagcgtata ggtcggtgcc gtggtgttgt
     2641 tattcattgt tatccttcaa cctgcgtccg gagcgatgat tttgtacgtt tatgaatgag
     2701 tccggcgctt tcaaaaagcc agtacaacag ttttgcgatc atcagacatg cgccgaagac
     2761 cacgataaaa aagactacgc gtgagacaaa cgaatccagc ccttcacgtg ccagcacgat
     2821 catattgaag atcgccccaa agcagaaact gtgcaatatc gcagccttat agcgattagg
     2881 ctcgcggttg cccagctcat acagccagtc gaaccatttg atgatcagac caaccacgat
     2941 cgccccgagc gggatgaaca acgcgccgcc catcaccacc agtgagccta taagcgtagg
     3001 cgagatcgcc agtccggagt ggttattcag cacttccctg gtaaagtagt tggctgagtt
     3061 cagcaccata ctcgggcgac ccggccacag ccaggaaggg ataaagacat agaaatcgcg
     3121 gacaattgga gccaggccct ggaagtcgat gttgtcgtag ttctgcaaca gcaacgccag
     3181 attctcccac ggcgagaagg tgtcgcgagt gagatagaga aacgtataga acgcttcatc
     3241 gccgctcaca ttcattccat agcgttttag cgccagccag aacatgccca caatccccag
     3301 cacgcccgcc gccgccagca tccacaacga aatccagccg cgaataatgc caataaacag
     3361 gaagatagcg aatgcgatga tgatattggc gcgagtgccg ccgacaatca tataagtcag
     3421 caagccaaag gcgaccgtgc tgacgaggaa aaacagccac gctttgctat cctggcgcag
     3481 aaagtagacc accagcatcg ccgggatgaa aaagtaaaag aagcgtttta acgccacgcc
     3541 ggagacttca ctggagaaga tctgactgta ggagttaagc cggaacagca aaaagccgtt
     3601 gtgcatgaag aagatgccga cgcttaccag cgcgatgccc atcaggatca cccacgtaag
     3661 attggtctcc acgcggttca tggtaaacag cggacggcgc ggtacatcag caacgcgttt
     3721 gcgtaggcgg gttttgtagg tgacatagta aaccgcgtag aagcagcccg cagaaagcaa
     3781 cgcctgcaac aagatttctg gcggcgcgac accaacatca aagcgaaata ccagcacgct
     3841 ggtcagcggg aagccgaaga aaaaggtgag caaaaacagc aatgaaaaga agacattgaa
     3901 gttaaagcgc acacggcgaa actcaaacca agtcagcgtg gcaataaaca gcgtgcagag
     3961 cagccagacc acaaacaggc cactgaattg cagcagactc atgcgacctc cccggcggca
     4021 atcgccaaca cccgctgcca gccttgtaga tagttagggc taaagaaggc aatggtgttt
     4081 ttatccaccg acgccaactg gcgctgcgct tcacgcacaa tatcctcgtt gagatcgtcg
     4141 gtagtaaaca gcaccggcaa atgctgttcc gtcatatcct gccagaacgg attttcccgg
     4201 ttaagcacac aaggaatgcc cgcctgaatc agtaagcaaa gcgtaccaat gccctgctgg
     4261 cgggcaaaaa taaagtaacc aagatcgcac tgacgaagta gcgccagata ggcgtcaaat
     4321 tccagttttt cgctcaaaat ttgcagattt tcttcgctga ataactccag ccccgcctga
     4381 cgaacttcct caatgtacgc ttcgttatta ggcggatatc ccatcggcac caccactttt
     4441 accgtatcgc caaattgctg atgaacggcg cgcaaggcag caatatggtc attgctgcgg
     4501 tcaccggagt tccccaccag aatggtcatt ttcccttcac gttgccgatc gttcgccatc
     4561 gtattgagag aagggtccat ccgcgtcggg aagtacagca gttcgccccg cacctttgga
     4621 tgcgttttgg caaaaaagct caaatcaccg cgggtggcaa atacacagcc gactcgcttt
     4681 tgcgccaggc gacgtagcgg gtaaaaaagc ttatatctca agccactgga aagctcatac
     4741 aggtctgccc cccagatatg ccagaaaaac tggctgggct taatgccacc actcagcaga
     4801 gccagccaca gtgtgggatt gaactgaccg tggaaaaaaa atcgctgctg acggttagct
     4861 tttgctttcg cgatgaccgc ttccgccagc gattttttcc cagggaaaaa ttgcacagaa
     4921 agcgccggac agctatcact taagccgtcg tccttgccaa caaccataaa ctcgcgcgcg
     4981 tgctcgctcg tcgcggccag cgcgtcattg aaaaaccgca aaacggttcg gttatggtga
     5041 gggatatccg atcccagtac gtgaatcagt acagtcatgc ccgcctacgc cagagtaaaa
     5101 acacgccaca acaaagagaa aaatagacga tataagttgc catatatgcc tgcgccgcgc
     5161 ccagtgcacc atgcgcaggg attagccagt gggcaaatac catcaataaa gtgaactggc
     5221 tgacttccgc cagaatataa aaccgcagtg acgctttggc gatcaccaga taaccaaaga
     5281 cataagcgcc cacttttagc acatcaccca ctaactgcca ggcaaagaga tcgcgcatag
     5341 cggtaaattt attcgacaac agcaaccaga tagcaaaatc acgcagcaac cagacggtaa
     5401 aactcgccgc cgccactgcc ggtaagacga attttagcga tttaaccact tcccgggtga
     5461 tatcgcgctt ttccgttagc cgcgacaacg tgggcagcaa atatacgctg aacgatgccg
     5521 taatgaattg caggtaggca tcggaaatac tgctcacccc ttgccagatc cccacttcat
     5581 cccagctata ctgcgccgcc agcagtttac gcatcatgat gtaagcaaca ggcaaggtca
     5641 ccgacgtaat caacgccatg agcgtaaatt tgctcaactg ccctgccaga ccgttatccc
     5701 agctgggttt cagatagctt aacgggatga caccacgttt gatcaacatg atggcggcag
     5761 gaattaccac cagcgcggga atcagcgcca gacccagcaa cgccccttca taaccgccca
     5821 aacggtaact gacgtagtac gcgagaacgc caatcaagct gccgacaatc agcgataacg
     5881 cattacctgc ggcatcgcga aagcctttca tcagcgccag taacaggttg ccccaggcga
     5941 tccccatttg caccagcgcc actaaacgca ccagcccctg atagtcggta ttaccaaaca
     6001 atccctggct gattggcgca gctgccagca caaaaaccag cgccatcagc gtagagaaac
     6061 caagtaccat cgctgatgaa gtgccgacca cgcggcgcag ctgttgcgga ttatcatggt
     6121 actgggcaac gtatttggtt acaccgttaa agatgccagc cccggcaagc acgccgagca
     6181 cggtaatcaa ctggcggaaa tttgccgcca gcccaagccc cgccggacca aatgacaccg
     6241 ccagcaactt accgaccagt aacccggcac caatcttgac cagtgtactg gccgccgtcc
     6301 acaaggacgc ttttgccaac gacatatcag gagaagtagt tcaacaaagt cgcaattacc
     6361 gtacgctgat tgacgggcga caggttgtag aacagcggca ggcgcagcag gcgctcgctc
     6421 tctttggtgg tgtagcgatc ttcaccgtgg aactcaccaa agtgttcccc cgcagggcaa
     6481 ccgtgcagcg gaatgtaatg aaacaccgcc atgatttccg cttctttcag aaagttaatc
     6541 aacgcgctcc ggtcatcaat atcccgcagt ttaatgtaga acatatgcgc gttctgcacg
     6601 cagccatcgg gaatcgacgg cagctcgata cgcccggctt tcgccagagg cgctaacgca
     6661 tcgtagtaat tttgccacag cgccagacgt tgctggttga tacgatccgc tgcttccagt
     6721 tgcgcccaca ggtatgcagc ttgcagatcg gacatcaaat agctggagcc aatatcgcgc
     6781 caggtatatt tatcgacctg accacggaag aactggctgc ggttagtgcc cttttcacgg
     6841 atgatctcgg ctcgttcgat taacgcttta tcgttaatca gcgtcgcgcc gccttcacca
     6901 cccgccgtgt agtttttggt ttcatggaag ctaaagcagc caatatgacc aatggttccc
     6961 agtgcacgcc ctttgtaagt ggacatcacg ccctgagcgg catcttccac cacaaacaaa
     7021 ttatgctttt tcgccaacgc cataatggtg tccatttcgc aggccacacc cgcgtaatgg
     7081 accggcacga taacgcgcgt tttgtcggtg atcgctgctt caatcaacgt ttcgtcgatg
     7141 ttcatggtgt ccgggcgaac atccacaaag acgattttcg cgccacgcag cacaaaggca
     7201 ttggcggtgg agacaaaggt gtagctcggc atgatcactt catcgccagg ctggatatcg
     7261 agcagcagcg ccgccatctc cagcgaagcg gtgcaggacg gcgtcagtaa cactttggcg
     7321 ctgccaaaac gttgctccag ccactgctgg cagcgacggg taaaaccgcc atcgccacac
     7381 agtttgccgc tacccattgc cgactgcata tagtcgagtt cggttcccac caccggcggt
     7441 gcgttaaatg gaatcatgtg atcacctgta taaccagtac gcggtgcttt ctacattcgc
     7501 accactttgt atgtatcgtt taagcgcggc ggtgttgccc atttgggtcg ccacccgcaa
     7561 agttgtttta ccgcgagcat acgcccagtt tagcgccgtt tgcatcagct cagcacctgc
     7621 accgcgtcca gccagcaggc caattcgcgc atctgtcgca ttgagttccc gtaaagagac
     7681 atagccgcga atatcgccgg acgccgcacg tagaatcaga cattgatgat caaaggtgcc
     7741 gcgcacggca ttttcaatcc actgtgcata aaagcgaccg ctggcgtcag gcgcatacca
     7801 cggcgcacga aaacggcttt gcgcaaatgc ggcgctagct aactgacgta atgcgggaat
     7861 atcggtctct tgtgccacga cagcaccgct atcactgaca ttgttcacgg gtagcgccaa
     7921 atcaacttca ccttctacca gggagaatcc cagctgttgc agggcatcca gttcacccgt
     7981 atttgatgcc gcaattttgg cctgcacccg tgaccacggc gctaacgcgt ctggcgtcag
     8041 gagcggtgct tcagacgtaa tgcgcacgat ggcgctgtta acaccaaaga aggcgttttc
     8101 ccaggttagt ggctcaatac tggcgcggac gggcacgaag taactccagc agatattggc
     8161 cgtagccagt tttcgctaat gaactggcag cacgcttcac accctcgtca tcgagccagc
     8221 cgttacgcca ggcgatctct tccaggcagg caatcttaaa gccctggcgt ttttctactg
     8281 tctgcacaaa ggtactggct tcaatcaggc tgtcgtgagt gccagtgtcc agccaggcaa
     8341 atccgcgccc gagcagttca acggtcaggt tgcccgcctc gaggtacatc tggttgatgg
     8401 aggtaatctc cagttcacca cgctccgacg gcttcacctg ctttgcgtac tccacgactt
     8461 tactgtcgta gaaataaagc ccggtcaccg cccagtttga cttcggctgt tttggctttt
     8521 cttccagcga gatagcgcgg aaattgtcgt caaactccac cacgccaaag cgttcctggt
     8581 ccatcacctg atagccaaat accgtcgccc cttccgtgcg cgccgcaaca tgacgcagct
     8641 tcggactgaa gccctgaccg aagaagatgt tatcgcccag caccagacaa gaaggttcac
     8701 cgttgaggaa ggtttcaccg atgataaagg cctgcaccag accgtccggg ctgggctgtt
     8761 cggcgtattc cagctggata ccgaactcac taccatcgcc cagcaggcgc tggaaataac
     8821 ctttatcttc cggcgtagtg atgatgagaa tttcgcggat accggccaac atcagcaccg
     8881 acagcggata gtaaatcatt ggcttatcgt aaatcggcaa cagttgcttc gatacgccgc
     8941 gcgtaatcgg atgcaatcgg gtgccggaac cgcccgccag gataatacct ttcatgtttg
     9001 cctccgctga aaattagcct ttcagaccta aacgctcgcc ctgatagctg ccgtcctgca
     9061 cctgcttcca ccagctttca ttagccagat accactgcac cgttttacgc attccacttt
     9121 caaaggtttc ctgtggcagc cagccaagtt cacgggcaat tttcgaagca tcaatggcat
     9181 aacgcagatc atgccccgga cggtcagcga caaaggtgat caagtcacga tagtgcacca
     9241 cgccgtgcgg cttgttcgga gccagttctt ccagcagctc gcaaatggtt tccacaacat
     9301 cgagattctt acgctcgttg tgaccaccaa tattataggt ttcaccgact ttcccggtgg
     9361 tcgccacgca atacagcgcg cgggcgtgat cttccacata cagccagtca cggatttgct
     9421 gcccgttgcc atataccggc agcggtttac ccgccagcgc gttgaggatc atcagcggga
     9481 tcagtttttc cggaaagtgg taaggaccgt agttattcga gcagttggtg ataagcgtcg
     9541 gcagaccgta ggtccgcagc caggcgcgca ccagatggtc gctgctggct tttgacgcgg
     9601 aataagggct gctcggcgca tacggcgtgg tttcggtgaa gaaatcatcc gtcgagtgca
     9661 ggtcaccata tacttcgtcg gtggagatat gatgaaaacg gaacgctgat tttttatctt
     9721 ccgtcagcgt attccagtaa gcccgcgccg cttcaagcaa tgtataagtc ccgacaatgt
     9781 tggtttcaat aaacgctgcc gggccgtcaa tagaacggtc aacatggctt tcggctgcca
     9841 gatgcatgac acagtctggc tgatgctcag tgaatacgcg tgccagttct gcccgatcgc
     9901 agatatcaac tttctcaaag gcaaagcgat cgctttgcgc gaccggtgcc agcgacatca
     9961 ggtttccggc gtaggtcagc ttatcgacca ctaccaccgc gtcgctcgtt tcgttgatga
    10021 tataacgcac cagcgccgag ccaataaacc cggcaccacc tgttatcaga atttttctca
    10081 tcagcgccag actcctttgg catcgacgac atactgctga tggacattgt cgccattgat
    10141 aactttaaac tgactatgat cgaccagcat caccagcacg tctgccgttg ccagcgcctc
    10201 gtcaagctgc gccagagtac aaagcccggt cagttttttc ggcaactggt ggatgttagg
    10261 ctcaacaacc agagtttcgc cgctatgcca ctgggcgatc agttcagcga tttccatcgc
    10321 cgggctttcg cgcaggtcat caatattcgg tttaaacgcc agaccaaagc aggcgatttt
    10381 cagttcactg gcgcgtttat cggtagccgc caggcaatca gccaccgccg ctttcacctg
    10441 atcgataacc cagaacggtt tgtgatcgtt cacttcgcgc gcggtacgga taagccgcgc
    10501 ctgctggggg ttctgtgcca cgataaacca cggatcaaca gcaatgcagt gaccgcccac
    10561 gccagggcca ggctgaagaa tattaacgcg agggtgacga ttcgccaggc gaatcagttc
    10621 ccagacgtta atcccctgat cggcacaaat cagcgacaat tcattagcaa aagcgatatt
    10681 cacatcgcgg aagctgtttt cggtgagctt acacatttcc gccgtccgcg agttagtgac
    10741 gacacactca ccttcgagga aaattttgta cagttcgctg gcgcgggtcg aacaaaccgg
    10801 cgtcatacca ccaatcacgc gatcgttttt aatcagctcg accataacct ggcccggtaa
    10861 cacgcgttcc gggcagtaag caatgttgac gtccgcctgc tcgcccacct gctgtgggaa
    10921 agtgagatcc ggacgcatct ctgctaacca ttctgccatc ttctcggttg accccaccgg
    10981 cgaggtggat tcaaggatca ccagcgcgcc ttttttcagc actggcgcaa tggagcgagc
    11041 agccgattca acgtaggtca tatctggctc atgatcgcct ttaaacggcg tgggtacagc
    11101 aatcagccag gcatccgctt caactggcgt cgtgctcgct cgtaaaaaac cgccttctac
    11161 ggcagttttt actacgctcg ccaaatcagg ctcgacgata tggatttcgc cacgattgat
    11221 ggtatcaacc gcgtgttggt tgatatcgac accaatcacc tgtttttgcc gtgaggcaaa
    11281 cgctgctgct gtaggcagcc cgatgtaacc cagtccgata acagaaatgg tcgcaaaact
    11341 catagtgata tccgattatt ttttaacgct tccagaatgc gagagcatgc ctgaccatca
    11401 ccatacgggt tatgggcgcg gctcatagtt tgatattcgt tttcgtcttt taaaagacgc
    11461 gtcacttcct cgacaattcg ctgcttatcc gtgcctacca gacgcaccgt acccgccgtc
    11521 accgcttccg gacgctcagt ggtatcgcgc atcaccagca ccggtttccc cagcgaaggc
    11581 gcttcttcct gaatgccgcc tgagtcggtc aaaatcagcc aggcgtggtt catcaaccag
    11641 acaaacggta aatactcctg gggatcgatc agaatgacat ttttcacatg ccccagaatg
    11701 cgattgaccg gctctctgac gttcgggttg agatgcaccg gatagacaat ctggatgtcc
    11761 tggtgcgtgg tggcaatgtc tgccaacgcg tggcagattt cttcaaaacc acgaccgaaa
    11821 ctctcacgcc tgtgaccggt caccagaatc atctttttat tggggtcgat aaacgggtaa
    11881 tttgccacca gttctgaacg cagcgtgtcg ctgctcatca cctgatcacg cacccataac
    11941 agtgcatcaa tgactgtatt accagtaatg aagattcggc tatccgcaac gttttcacgc
    12001 agcaagtttt gccgggaagt ttcggttgga gagaagtgat acatcgccag atgcccggtc
    12061 aatgtacggt tagcctcttc cggccacggc gaatagagat cgcccgtgcg taaaccagcc
    12121 tcaacgtgac caacaggaat acgctgataa aacgccgcca ggctggttgc cagcgtcgtt
    12181 gttgtgtcgc cgtgaaccag cacgacgtct ggtttgaact cggcaagaat aggttttagc
    12241 ccttccagaa tccgacaggt tatctctgtc aggccctgtc ctggctgcat tatgttgaga
    12301 tcgtagtcag gtacaatgga aaagagtttc agcacctgat cgagcatctc ccgatgctgc
    12361 gcagtgacgc aaactttagc ctcaaaaaaa ggagcttttg ccaacgcatg caccaacgga
    12421 gccatcttga tggcttccgg gcgcgtacca aatacagtca gtactttcac atcgattctc
    12481 ttcgaataag cggcgagcgc ctttgcgctc gccgcagcag tgttgctatt tcgagcaacg
    12541 gcgggttaat gcgacaccag ccccgatcag ccccccgaca atgccccaca taatcatcag
    12601 gaaggcacga cgtgggctat cgcgttttac cggttcttcc ggcgtacgca aatagcgata
    12661 ggtctgaaaa cgcggatcca gggttggacc aacattcagg gtgtttaaca tggcccgatt
    12721 ctgatcatag tcgagatcaa aggccggacc gacggcctgt aaattttcca gtcgagcctg
    12781 gagcattgga cgcccaagca ggaacatttc tgaatcaggt aattcctcgg caggcacatc
    12841 tgtcgcactg cgcgaaatat tatgctgctc agcaattttc agcgcctgct caatgctgtt
    12901 catccggcgg tcgtagatgg ctttcgccac ctcttcctga cgcttcacct gagctttcat
    12961 ctggatggtg cgtgccgccc atgcgccttt cagctcatca ttcagatggc tggctgcacg
    13021 ctggctggca aaagcaacat actgacgtaa caggttatta gcgtcaggcg cggtttcggc
    13081 aataagcttc acgctgtcat tgaccgcgcg ggtaaagtct ccggggataa actggatgtt
    13141 gttaatcatt tcatccagca acgccgcatc ggctttgctg ttgcccacca tccgctgttt
    13201 gtaatagtcg gtttgcagcc agaactctct gcgggtatcc cacgaggcca gttgcataac
    13261 aaactcttta taggcttcgt ccatgaccga tggttgatcg gcagaagcca tgtttgaacg
    13321 gacatccagg ttacgcaaaa attgctgctg cgagtaatat ccccccagca tattcaccgt
    13381 tggacgatcg gtaatcgccg tcgagctcca ctcctgacga gcaaaaaaag tatacgccag
    13441 cgcgattaac gcaaacgcca gccccatgcc aataatccat agcttcccag cccacaaggt
    13501 acgaaacaac ccacgaatat ccagttcatt ttcagcgtct tcggccggtt tcccaggcat
    13561 tggttgtgtc atcacatcct catttatttg gttaaattgg ggctgccacc acgatttcta
    13621 cgcagtctgc gttttacgcg cttaataaag cgagcaactt tccaggcacg cttaatgcaa
    13681 tatccataga ggaagaatgc tagcaaaaag agcaccagca tgacccactc cgggacaaaa
    13741 tgagaatatt ctgccagcac gccaatggaa gcgagcagtg ctgcggcaag ggtaatcagc
    13801 acaaacgcct gacgggaagt aaacccggca cgcatgatca aatggtgaat atgctgacgg
    13861 tcaggagaga atgggctcat gcctttacgc aggcgacggt acataatcgc caccatatcc
    13921 attagcggaa tggcgattat ccacaaagcg gtaaccgggc tgatgggatg ggttttgccc
    13981 tgggtcgttt cgagcaggat ccagataacg gtaaaaccaa tcagcgtact gcccgcatca
    14041 cccataaaga ctttgtagcg gcgacccagg ataccaaggt taagcatgat gtatggcagg
    14101 atggcggcga tcatcgcaaa gcaccagatt gcgaggctgg tttgcccgtc gaaccacaaa
    14161 atcataccga ttgctgcaaa cgagacgcag gacaacccgc ccagcaagcc atcaatgcca
    14221 tcaaccatgt tgaacgcatt aatggccgcc cagacggcaa atagcgtcag gaagtaacca
    14281 aacggtccga gcaccatctc ccaggagcca aagatataac ccaggctact gagataaagt
    14341 ttgccgaaca ccatcataac aatgccaaca gcggcctgta tggtggcacg gatttttacg
    14401 ctgatatcaa aacggtcatc cagcgcgcca atgaaaacaa gcacaccggc acaagcgaga
    14461 tagagagatg catgcggaat atagtaatcg acaattccga acgtgaagca aatccctgcg
    14521 taaaccgaaa tccccccaac gagaggtatc aatccctggt gacgtttgcg gaagtttggt
    14581 ttatccacta aaccgacttt ttttgccacc ttacgggcaa aaaacagaaa cagtgtcgtg
    14641 aataaaaaaa tactgatgag atcagtactc actgtcagta aattcacaat gcatgctctc
    14701 agagaaaatt attagcagaa gtataaccac gaagaccttt attcagaagg gaaagtccgt
    14761 tccgaaccca ccagtcctgt gcaaaaatta accatttgat atgcaaattg cataacatgc
    14821 cagcaaattc caggaatttt cctaacatcg ccagcgcggc attaagatta cagatataaa
    14881 agcaaaacgc cacgtaaaca cgtggcgttt ttggcataag acaaatttat gagcgtttca
    14941 tcatttcgaa gaaatcgtca ttggtcttgg tcatggccag tttattaatg aggaattcca
    15001 ttgcatcgat ttcgcccatc gggtgaatga ttttgcgcag gatccacatt ttctgcagtt
    15061 cttcctgagt cgtgagcagc tcttctttac gggtaccgga acggttgtag tcgatagccg
    15121 ggaagacgcg tttttcagcg atcttacgag agaggtgcag ttccatgttg cctgtacctt
    15181 taaactcttc gtaaataact tcgtccattt tagaaccggt atcgataagc gccgtcgcga
    15241 taatggtcag gctgccgccc tcttccacgt tacgcgccgc accgaagaag cgtttcggac
    15301 gatgaagggc attggcgtcc acaccaccgg tcaacacttt acctgacgcc ggaacaacag
    15361 tgttgtaagc gcgcgccaga cgagtgatgg agtcgagcag aatgataacg tctttcttgt
    15421 gctcaaccag gcgtttggcc ttctcgatca ccatttccgc aacctgaacg tggcgagatg
    15481 cgggttcgtc aaaggtagaa gcaacaactt caccttttac cagacgctgc atctcggtta
    15541 cttcttccgg acgttcgtcg atcagcagaa ccatcagcac acaatccggg tggttgtaag
    15601 caatgctctg agcaatgttc tgcagcagca tagttttacc ggctttcggc ggtgccacaa
    15661 tcagaccacg ctgaccacga ccgataggtg atgccagatc cagtacgcga gcggttaaat
    15721 cttccgtaga accgttacca cgttccatac gcagacgaga gtttgcgtgc agcggggtta
    15781 agttctcaaa gaggattttg ttgcgggcgt tttcaggttt gtcgaagtta acttcgttaa
    15841 ctttcagcag cgcaaaatag cgttcacctt ctttcggcgg gcgaatctta ccagagatgg
    15901 tatcaccagt gcggaggttg aaacggcgga tttggctagg ggaaacgtag atgtcatcag
    15961 gaccggcgag gtaggagctg tctgcggaac ggaggaaacc aaatccatcc tgcaatatct
    16021 ccagtacgcc atcaccaaag atatcttcgc cactctttgc gtgctgcttc aggatggcaa
    16081 aaataatgtc ctgcttacgc atacgagcca ggttttccag ccccatattt tcgccgagag
    16141 tgatcagctc agaaaccggc gtattcttta attcggtaag attcatagtg gtgtgagttc
    16201 ttaaacttgg ggtaaatctc gaacttaatg ttgtgaatgg tatggcagga tcatccatgc
    16261 ctgtttacgg tcatcgactc atgtcttttc gctgcctggt cacaggagag tacgcagaac
    16321 tgaaacgaca agacggattg agtgacgagc cagaaatctg ttcacttcgc atttaagata
    16381 aaacgggaag cgttggaaat tacaagattc aaacttaata aggtatgttt aatacgaagt
    16441 caacactaag ttagcatgac tcacgccggg cgtccagttt ttagcgacgg ggcacccgaa
    16501 catgaaattc ccttacgcca ggttagcgtc gaggaactct ttcaactgac ctttagacag
    16561 tgcacccact ttggttgccg ccacttcacc gtttttgaac agcagcagag tcgggatacc
    16621 acggatgcca tatttcggcg cagtgccagg gttttgatcg atgttcagtt ttgcaacggt
    16681 cagtttgccc tgatattcgt cagcgatttc atccagaatc ggggcgatca ttttgcacgg
    16741 accgcaccac tctgcccaga aatcgacgag gatcgccccg tccgctttga gtacatccgt
    16801 gtcaaaactg tcgtcagtca ggtgaataat tttatcgctc atatataact ccacaggaat
    16861 aagcctggcg tgttggtttc gttgttggtg taacattaac caactaaagg ttgactttat
    16921 ttcaccggat acgctttcgt aaagcaatag taagctgata ttctaccaca ctatgagcaa
    16981 aacacattta acagaacaga agttttccga cttcgccctg catccgaagg ttgtagaaat
    17041 ccttgaaaaa aaagggtttc ataactgtac gcccattcag gcactggccc ttccgctgac
    17101 gctggcgggt cgtgacgtag ccgggcaggc gcaaaccggt accgggaaaa cgatggcgtt
    17161 tcttacgtca acgtttcatt atcttctctc tcatcctgcg attgccgatc gcaaggtgaa
    17221 tcaaccacgt gccttaatta tggcaccgac gcgtgaactt gccgtgcaga tccatgccga
    17281 cgcagaaccg ctggcggaag ctaccggcct gaagctgggt ctggcttacg gtggtgatgg
    17341 ctacgacaaa cagctgaaag tgctggaaag cggcgttgac attctgattg gcactacggg
    17401 gcgtttaatt gactacgcca agcagaacca cattaacctc ggtgccattc aggtggtggt
    17461 actggacgaa gccgatcgca tgtacgatct gggctttatt aaagatatcc gctggctgtt
    17521 ccgccgtatg ccgcctgcaa accagcgcct caacatgctg ttctccgcca cgctttcgta
    17581 ccgggtacgt gaactggcgt tcgagcagat gaacaatgcc gaatatattg aagtggaacc
    17641 ggaacagaaa acgggccacc gtattaaaga agagcttttc tacccttcta acgaagaaaa
    17701 aatgcgtttg ctgcaaacgc tgatcgaaga agagtggcca gacagagcga ttattttcgc
    17761 caataccaaa caccgttgtg aagagatctg gggccacctg gcggcagatg gtcatcgtgt
    17821 cggtttgttg acaggcgatg tcgcgcagaa aaaacgtctg cgtattcttg atgaatttac
    17881 ccgtggcgat ctggatattc tggttgccac cgacgttgcc gcgcgtggtt tgcatattcc
    17941 ggcagtgacg cacgtcttta actacgattt acccgatgac tgtgaagatt acgttcaccg
    18001 tattggtcgt acaggtcgcg caggcgcaag cggtcactct atcagcctgg cgtgtgaaga
    18061 gtatgcattg aatttgcctg ctattgagac ctatattggt cactcaattc cggtaagcaa
    18121 atacaatccg gacgcattga tgaccgatct gccaaaaccg ctgcgcctca cgcgcccacg
    18181 tacaggcaat ggtccgcgtc gtactggcgc tccgcgtaat cgtcgtcgtt caggttaaat
    18241 aaaatgtcat actcaaaatc attcaaactg tatcaagatg gcaagagaat gaatcccgat
    18301 gagcatactg tagtaagtga ttcaggtgaa agaatgcagc caacacagag acagattgaa
    18361 ggatgaagag tatgggttcc acctcgtcgc tgtatgcagc cattgatctc ggttcgaata
    18421 gttttcatat gctggttgtg cgcgaggtgg ctggaagcat ccagacgctg acgcgaataa
    18481 aacgcaaagt gcgtctggct gctggcctga atagcgaaaa tgccctgtct aatgaagcaa
    18541 tggagcgcgg ttggcaatgt ctgcgcctgt ttgctgaacg tctgcaagat atccctccct
    18601 cgcaaattcg cgttgtcgct acggcgacat tacgtcttgc cgtcaatgcg ggtgatttta
    18661 ttgccaaagc gcaggaaatc ctcggttgtc cggtacaggt gatcagcggt gaagaggaag
    18721 cacgtctgat ttatcagggc gttgctcaca caactggcgg tgccgatcag cgcctggtgg
    18781 tggatatagg cggtgccagt actgaactgg taaccggcac gggtgcacaa accacctcgt
    18841 tgttcagcct gtcgatgggc tgcgtcacct ggctggaacg ctattttgcc gatcgtaatc
    18901 tggggcagga aaattttgat gctgcagaaa aagcggcacg cgaagtgtta cgtccggttg
    18961 ccgatgaatt acggtatcac ggctggaaag tgtgcgttgg tgcttccggc accgtgcagg
    19021 cgttacagga aatcatgatg gcacagggga tggatgaacg cattaccctg gaaaagttgc
    19081 agcaattgaa acagcgagcc attcattgcg gtcggctgga ggaactggag attgacgggc
    19141 tgacgctgga acgtgcgtta gtgttcccga gtggtctggc gatcctgatc gccattttta
    19201 ccgaactgaa tattcagtgt atgaccctgg cgggcggtgc gctgcgtgaa ggcctggtct
    19261 acggcatgtt gcatctggcc gtcgagcagg atattcgcag ccgtacgctg cgtaatattc
    19321 agcgccgctt tatgatcgat attgatcagg cgcagcgcgt agccaaagtt gcggctaact
    19381 tcttcgatca ggtggaaaag gaatggcatc ttgaagcaat aagccgcgat ttgctcatca
    19441 gcgcctgtca gcttcatgaa atcggcctga gcgttgactt taaacaagcg ccgcaacacg
    19501 ctgcttatct ggtgcgtaat ctggatcttc ccggttttac ccccgcacag aaaaaattgc
    19561 tggcgacgct actgctcaac cagactaatc cggtcgatct ctcatcgctg catcagcaaa
    19621 atgccgtacc gccgcgcgtc gcagaacaac tctgccgttt actccgcctg gccatcattt
    19681 ttgccagccg tcgccgtgac gatctcgtgc cagagatgac attacaggct aaccatgaac
    19741 tgttgacctt gacgcttccg caaggttggc taacccaaca tccgctgggt aaagagatta
    19801 ttgctcagga aagccagtgg cagagctatg tccactggcc gctggaagtg cattaatgag
    19861 taagtgccgg atgcgatgct gacgcatctt ttccggcctt gattatttcc ctcgttttgc
    19921 cgccatcatc gctttcagat tcgccagatg gctttgccct ttctgcatcc gttcttcggc
    19981 gctgaccact ttgcgctcct gttcccaaat cagatcatcc tgcggcagct ccagcaaaaa
    20041 gcggctcggc tccgggcgca ccagctcgcc gtactgacgg cgttctttac acagcgtaaa
    20101 ggtcaattcc ttctgggcgc gggtaatgcc gacataggcc agccgccgct cctcatcgat
    20161 attatcttca tcgatgctgc tctggtgcgg caaaaaccct tcttccatac cgaccatgta
    20221 gacataagga aactccagcc cttttgacgc gtgcagagtc atcagttgca cctgatccag
    20281 ctcttcttca ctctcaccac gctccatcat gtcgcgcaaa gtaaagcgcg tcaccacctg
    20341 ggtgagcgtc atcggctcat ccagttcgct gccttccagc atctccgtca tccagctaaa
    20401 cagttggttg acgttcttca tgcgcatttc ggcggctttc gggctgggcg atgtttcgta
    20461 cagccaggat tcataatcca tgccgtggat cagatcgcgc accgcggcaa tcggctcccg
    20521 ctccgccaga cgctggattt ctgccaacca gtgagtaaag cgggtcaatg cttcataacc
    20581 acgtccgcta agcgtctgac tcaggcccat atcaaagctg gcggtaaaca tgcttttatt
    20641 gcgcgtcatc gcccactcac ccagcttttt cagcgtcgcc gggccaatct ctctcttcgg
    20701 cgtgttaacg atacgcagaa atgcgctgtc atcgtccggg ttagtcagca cgcgcagata
    20761 agccagcaag tccttgattt caggacgaga gaaaaacgac gtaccaccag aaattttgta
    20821 cgggatgcgg ttttgcatca ggaatttttc aaacactcgc gactgatggt taccgcgata
    20881 aagaatagcg taatatttgt actgcgtttt attgacgaag tgatgcgcaa tcagttcacc
    20941 agtgacgcgc tcggcttcat gttcttcgtt attcgcgctt aaaactttaa gctctgtgcc
    21001 gtaacccagt tcggagaaca gacgcttctc aaagacgtgc gggttattgg cgatcaggat
    21061 gttcgccgct ttcaaaatac gtccggaaga gcggtagttc tgctcaagct taatcacctt
    21121 cagcgccgga aaatcctgac tcagcagcac caggttttgt ggacgtgcgc cgcgccagga
    21181 gtagatcgac tggtcgtcat cgcccaccac ggtaaagcgc gcgcggctgc ccaccagcag
    21241 tttcaccagt tcatactggc tggtgttggt gtcctgatac tcatccacca gcagatagcg
    21301 aattttgttc tgccagcgct cacggacttc ttcattgcgt tgcagcagca acgtcggcaa
    21361 taaaatcaga tcatcgaagt cgagaacatt gcacgctttc aggtgtgcat catacagccc
    21421 ataacaatgg gcaaaaatac ggtcccgctc gccaatcgca ctggctgccg cctgggacgg
    21481 tgttttgaga tcgttcttcc agttagagat ggtcgaaatc aactgttgca ggagaacttt
    21541 gtcatcttca atcagccctt cggtcaactc tttgagcaac gccagctgat cggtatcgtc
    21601 aaacagcgaa aagttcgcct tcatccccag cgccgcatac tcacgcttga tgatatccag
    21661 ccccagcgtg tggaaggttg agatcatcag cccacgcgcc tctttgcgac ccagcgtctg
    21721 tccgacacgc tctttcatct cgcgcgccgc cttattagta aaggtcaccg ccgcgatatg
    21781 tcgcgcctga taaccgcaac cgcggatcag atgggcgatt ttattggtga tcacacgagt
    21841 tttaccggaa cccgcgcccg ccagcaccag gcaggggccg gtaacgaatt cgacagcttg
    21901 ttgttggccg gggtttagac gcataggtgt attgctcaat cttcgaacgg ggggaggatt
    21961 gtagcagaat cgcatttgaa tgtgaccgcg tgtaagccgc taaccggttg gctgcggatg
    22021 tttaaatcag agagggaaga ccgaaaccgg agttcatcgt gaatccatta gacttagaaa
    22081 atatcgggtc gtaacgttgt gttattactt tttcagagtt tactaaggag aggtgtactc
    22141 gtggcgatta atttcagtcc taaggttggt gaaatactgg aatgcaactt tggtaactat
    22201 cctgttagcc agaatggaca gttcagcacc acgtattacg atggccgcat tcctcctgaa
    22261 atgataaaaa acaggttagt
//
LOCUS       DADKRT010000058        22184 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.059, whole genome shotgun sequence.
ACCESSION   DADKRT010000058 DADKRT010000000
VERSION     DADKRT010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22184
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.059"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            100..682
                     /locus_tag="JQ356_001847"
                     /pseudo
     CDS             100..682
                     /locus_tag="JQ356_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417001.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(777..2354)
                     /gene="guaA"
                     /locus_tag="JQ356_001848"
     CDS             complement(777..2354)
                     /gene="guaA"
                     /locus_tag="JQ356_001848"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HAY4621960.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA
                     SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMHMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYNKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(2423..3889)
                     /gene="guaB"
                     /locus_tag="JQ356_001849"
     CDS             complement(2423..3889)
                     /gene="guaB"
                     /locus_tag="JQ356_001849"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004159092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HAY4621961.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
                     RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
                     NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
                     VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
                     DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
     gene            4051..5421
                     /gene="xseA"
                     /locus_tag="JQ356_001850"
     CDS             4051..5421
                     /gene="xseA"
                     /locus_tag="JQ356_001850"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HAY4621962.1"
                     /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
                     QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
                     TRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
                     KRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRVQLSATRERFGNAVTH
                     LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK
                     SRKKVH"
     gene            complement(5418..5633)
                     /locus_tag="JQ356_001851"
     CDS             complement(5418..5633)
                     /locus_tag="JQ356_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417005.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4621963.1"
                     /translation="MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVL
                     KACGAVDYFCQHGHGLISKKRVEFVLA"
     gene            complement(5702..7174)
                     /gene="der"
                     /locus_tag="JQ356_001852"
     CDS             complement(5702..7174)
                     /gene="der"
                     /locus_tag="JQ356_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417006.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HAY4621964.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMEDLAPQEEVDEDAEYWAQFEVEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
                     EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
                     SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK"
     gene            complement(7292..8470)
                     /gene="bamB"
                     /locus_tag="JQ356_001853"
     CDS             complement(7292..8470)
                     /gene="bamB"
                     /locus_tag="JQ356_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HAY4621965.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
                     TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG
                     WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG
                     LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
                     VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYD
                     GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
                     "
     gene            complement(8481..9101)
                     /locus_tag="JQ356_001854"
     CDS             complement(8481..9101)
                     /locus_tag="JQ356_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HAY4621966.1"
                     /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS
                     HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
                     ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV
                     ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
     gene            complement(9119..10393)
                     /gene="hisS"
                     /locus_tag="JQ356_001855"
     CDS             complement(9119..10393)
                     /gene="hisS"
                     /locus_tag="JQ356_001855"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HAY4621967.1"
                     /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDLNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL
                     LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPIVDIYLV
                     ASGADTQSAAMALAERLRDELQGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
                     TNGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            complement(10504..11622)
                     /gene="ispG"
                     /locus_tag="JQ356_001856"
                     /gene_synonym="gcpE"
     CDS             complement(10504..11622)
                     /gene="ispG"
                     /locus_tag="JQ356_001856"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HAY4621968.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK"
     gene            complement(11649..12662)
                     /gene="rodZ"
                     /locus_tag="JQ356_001857"
     CDS             complement(11649..12662)
                     /gene="rodZ"
                     /locus_tag="JQ356_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HAY4621969.1"
                     /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLLGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
                     GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
                     DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF
                     SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
                     PAQ"
     gene            complement(12947..14101)
                     /gene="trmG/rlmN"
                     /locus_tag="JQ356_001858"
     CDS             complement(12947..14101)
                     /gene="trmG/rlmN"
                     /locus_tag="JQ356_001858"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HAY4621970.1"
                     /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ
                     VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
                     RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
                     AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
                     LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
                     IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL
                     MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
     gene            complement(14251..14682)
                     /gene="ndk"
                     /locus_tag="JQ356_001859"
     CDS             complement(14251..14682)
                     /gene="ndk"
                     /locus_tag="JQ356_001859"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HAY4621971.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
     gene            complement(14831..17143)
                     /gene="pbpC"
                     /locus_tag="JQ356_001860"
     CDS             complement(14831..17143)
                     /gene="pbpC"
                     /locus_tag="JQ356_001860"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417014.1"
                     /note="penicillin-binding protein 1C; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase PbpC"
                     /protein_id="HAY4621972.1"
                     /translation="MLRLLTKRGCWITLAAVPFLLFLAAWGADKLWPLPLHEVNPARV
                     VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA
                     AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKILQLWRALQLEWHLSKREILILY
                     LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAA
                     RNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTL
                     DAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV
                     NAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA
                     LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA
                     AYTAFARHGKAGKLRLQPDDPLLEWPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPL
                     AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLS
                     RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG
                     INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCP
                     PYGHYAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRN
                     VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ"
     gene            complement(17144..22105)
                     /gene="yfhM"
                     /locus_tag="JQ356_001861"
     CDS             complement(17144..22105)
                     /gene="yfhM"
                     /locus_tag="JQ356_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha2-macroglobulin"
                     /protein_id="HAY4621973.1"
                     /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN
                     ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH
                     VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT
                     TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN
                     SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG
                     RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA
                     TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG
                     PRDLYRPGETVILNGLLRDADGKALPDQPIKLDVIKPDGQVLRSVVSQPENGLYHFTW
                     PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPNDEVKFSV
                     VGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK
                     GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPANALPGLRPQFALK
                     SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSE
                     DEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG
                     YSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW
                     QEIDVPAQGLDLTIPVDKTWNRHDLYLSTLVVRPSDKSRSATPKRAVGVLHLPLGDEN
                     RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP
                     WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPLVNHVNIVAQQA
                     LPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF
                     MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR
                     ALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAI
                     PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA
                     QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLV
                     RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ
                     KAPLGALREIWEHRADAASGLPLLQLGIALKTMGDATRGEEAIVLALKTPRNSDERIW
                     LGDYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAAR
                     TIQDLPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRMDASGYP
                     QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP
                     AGLELENQNLANGSASLEQSGDEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV
                     TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP"
BASE COUNT         5281 a         6221 c         5498 g         5184 t
ORIGIN      
        1 acgacaggtt tagccgttgt tattaccaca acgtataacg aaacgcgtat tcagccaaat
       61 actaaatgtc ctgaaaagag ctaataatca ggaggagtca tgaagaaagt ttttctttgc
      121 gccatcttgg cctccttaag ctatccggct atcgcctcat cattgcagga tcaactctct
      181 gctgtagcag aagcggaaca gcaaggtaaa aatgaagagc aaaggcagca tgacgaatgg
      241 gtcgcggagc gcaacaggga aatccagcaa gagaagcaac gtcgcgcaaa tgcccaggtc
      301 gccgctaaca aaagagcggc aacgtcgcgc aaatgcccag gtcgccgcta acaaaagagc
      361 ggcaacggca gcagcaaata agaaagctcg tcaggataaa ctggacgccg aagcctctgc
      421 ggacaaaaaa cgcgatcaaa gttatgaaga tgagctacgc agcttagaga ttcagaaaca
      481 aaaactggcg ctggcaaaag aagaagcccg cgttaagcga gaaaacgaat ttatcgatca
      541 ggaactgaag cacaaagctg cgcaaaccga tgtggtgcaa tctgaagctg acgccaacag
      601 aaatatgact gaaggcggtc gcgatctgat gaaaagcgtg ggcaaagcag aagagaacaa
      661 atcggacagc tggtttaatt aatcgatgtt agtaacttca agcctatgat tcttgaagat
      721 aaaaaaccct ctgtagtaac agagggtttt gttcattcat agtgcaggga ttaaaatcat
      781 tcccactcaa tggtagctgg cggcttgccg ctgatgtcat acaccacgcg ggaaataccg
      841 ttcacttcat tgataatgcg gttggaaacg cgaccgagga aatcgtacgg cagatgcgcc
      901 cagtgtgcgg tcataaagtc gatggtttcg acagcacgca gagagacaac ccagtcatac
      961 ttacgaccat cgcccattac gccaacggaa cgtaccggca ggaacacagt gaacgcctgg
     1021 ctgactttgt tgtacaggtc cgctttacgc agttcttcaa tgaagatggc gtcagcacgg
     1081 cgcagcaggt cacagtactc tttcttcact tcacccagca cacgaacgcc aaggcctggt
     1141 cccgggaacg ggtgacggta cagcatgtcg tacggcaggc ccagctccag accaatctta
     1201 cgcacttcgt ctttgaacag ctctttcagc ggttcaacca ggcccatctt catctctttc
     1261 ggcaggccgc ccacgttgtg gtgagatttg atgacgtgtg ctttaccggt tgcagaagcc
     1321 gcagattcga taacgtcagg gtagatggtg ccctgcgcca gccacttcac gtcttccagt
     1381 ttcagcgctt cttcatcgaa cacttcaacg aaaacgcgcc cgatgatttt acgttttgct
     1441 tccggatcgt tttcgccagc cagcgctgac aggaagcgat cttctgccgg tacgtgaaca
     1501 atgttcagac caaagtgatc gccaaacata tccagaacct gctctgcttc gttgagacgc
     1561 agcaggccgt tgtcgacgaa tacgcaagtc agatttttac cgatagcgcg gtgcagcagc
     1621 attgcggtta cggaggaatc cacaccacca gagaggccga ggatgacttt atcgtcgcct
     1681 acctgctcgc ggatgcgagc tacagcatcg tcgataattt tcgctggcgt ccacagggct
     1741 tcacactggc agatatcacg cacaaaacgc tccagcatgt gcataccctg gcgggtgtga
     1801 gtcacttccg ggtggaactg tacgccatag aagcgttttt cttcgttagc cataatggca
     1861 aacgggcagc tttcggtgct ggctacggtg acgaagtcgg acgggatagc ggtaacttta
     1921 tcgccgtggc tcatccagac atcgagcagc ggtttaccgt ctgcggtcag cgcatcttcg
     1981 ataccgcgaa ccagtgcgct gtcgtttacg acttcaacct gcgcgtagcc aaattcacgt
     2041 tcgttagagg cttcaacgtg accgcccaac tgcattgcca tggtctgcat gccatagcaa
     2101 acgccgaata ccggtacgcc tgcttcaaag acatactgcg gcgcacgcgg actgttttct
     2161 tcagtagtac tttccgggcc gccggaaaga ataatgccgc ttggattgaa gtcacgaatt
     2221 tgtgcttctg tcacatccca cgcccacagt tcgcagtaaa cacccagctc acgcacgcgg
     2281 cgcgcaacca gttgagtgta ctgagaaccg aagtccagaa tgaggatgcg atgcttatga
     2341 atgttttccg tcattgacgc ttattccgag gcaagtgaaa cagataatat aaatcgcccg
     2401 acatgaagtc gggcgaagag aatcaggagc ccagacggta gttcggggac tctttagtaa
     2461 tggtcacgtc gtgaacgtgg ctttcctgaa tgcccgcacc gctgatacgt acaaactccg
     2521 ctttagtacg cagttcgtcg atagtaccac agccggtcag gcccatacag gagcgcaggc
     2581 cgcccatctg ctggtgaatg atctctttca ggcgaccttt ataggctacg cgaccttcga
     2641 taccttccgg caccagtttg tcggcagcgt tgtcactctg gaagtaacgg tcagaagaac
     2701 ctttggacat cgcacccaga gagcccatac cacggtaaga tttgtaagaa cggccctggt
     2761 agagttcaat ttcacccgga gattcttcag tacccgccag catggaaccc accattaccg
     2821 cgcttgcgcc agcggcgata gctttggcga tgtcgccgga gaagcgaata ccaccatctg
     2881 cgataaccgg aatacctgtg ccttccagcg cttcaactgc gtcagcaacg gcagtgatct
     2941 gcggaacacc tacgccagta acgatacgag tcgtacagat agaaccaggg ccgataccga
     3001 ctttaaccgc gctgcaacca gcttctgcca aagcgcgtgc acctgcagct gttgccacgt
     3061 tgccgccgat gatttgcaga tccggatatt tagcacgggt ttcacggata cgctgcaaaa
     3121 cgccttctga gtggccgtgg gaggagtcga tcagcagaac gtcaacgcca gcggcaacca
     3181 gcgcgtcaac acgctcttcg ttacccgcac ctgcgccaac tgcagcacca acacgcagac
     3241 ggccttgctc gtctttacag gcgttcggtt tacgttccgc tttctggaag tctttcacgg
     3301 tgatcatgcc gatcaggtgg aattcgtcat caaccaccag cgctttttca acgcgttttt
     3361 cgtgcatttt tgccagcacc acttcacggg cttcaccttc acgcacggtg accagacgct
     3421 ctttcggcgt catgtaaacg ctaaccggct ggttcaggtc ggtaacaaaa cgcacgtcac
     3481 gaccggtgat aatacccacc agttcgtttt cttcggtaac aaccggatag cccgcaaaac
     3541 cgttacgctc ggtcagttct ttcacttcgc gcagcgtcgt ggttggcaga acagtctgcg
     3601 gatcagtcac cacaccagat tcgtgttttt tcacacggcg aacttcttct gcctggcgtt
     3661 caatggacat gtttttgtgg ataaagccga taccgccttc ctgagccaga gcaatagcca
     3721 ggcgcgcttc cgttacggta tccattgctg cggaaagcat agggatattc agacgaatag
     3781 ttttcgtcag ctgggtgctg aggtcagcag tattcggcag aacggtagaa tgagcaggaa
     3841 cgaggagaac gtcgtcaaac gtcagagctt ctttagcgat acgtagcatg ggcaatatct
     3901 cgaccagagt ggttaataaa tattgccgcg gcattataca gagcgtaacc gattgcatct
     3961 accccttttt gcaaaaaatg cttgctatcc ccgaagggcg ggttactatc gactgaataa
     4021 cctgctgatt tagaatttga tctcgctcac atgttacctt ctcaatcccc tgcaattttt
     4081 accgttagtc gcctgaatca aacggttcgt ctgctgcttg agcatgagat gggacaggtt
     4141 tggatcagcg gcgaaatctc taatttcaca caaccggctt ccggtcactg gtactttaca
     4201 ctcaaagacg acaccgccca ggtacgctgc gcgatgttcc gcaacagcaa ccgccgggtg
     4261 accttccgtc cacagcatgg acaacaagtt ttagttcgcg ccaatattac gctctacgag
     4321 ccgcgcggtg actaccagat aatcgttgag agtatgcagc cggccggtga agggctgctg
     4381 caacagaagt acgaacagct caaagcgaag ttgcaggctg aaggtttgtt cgatcagcaa
     4441 tacaaaaaac cacttccctc ccctgcgcat tgcgttggtg tgatcacctc aaaaaccggt
     4501 gctgcgctac atgatatttt gcatgtgtta aaacgtcgcg atccttctct accggtgatc
     4561 atctacccca ccgccgttca gggcgatgac gcaccggggc aaattgttcg cgccattgaa
     4621 ctggcgaatc agcgcaatga gtgcgacgtg ttgatcgttg ggcgcggcgg cggttcgctg
     4681 gaagatttat ggagttttaa cgacgaacgc gtagcgcggg cgatttttgc cagccgcatt
     4741 ccggtcgtca gcgccgtcgg gcatgagacg gatgtgacca ttgccgattt tgttgccgat
     4801 ctgcgtgcgc caacgccgtc tgccgccgct gaagtagtga gccgtaatca gcaagagtta
     4861 ctgcgccagg tgcaatcgac ccgtcaacgg ctggagatgg cgatggatta ttatctcgcc
     4921 aaccgcacgc gtcgctttac gcagatccat caccgattac agcaacagca tccgcagctc
     4981 cggctggcac gccagcaaac catgcttgag cgcctgcaaa agcggatgag ctttgcgctg
     5041 gaaaatcaac ttaagcgtac cgggcaacag cagcagcggt taacacagcg gctgaatcag
     5101 caaaatccac agccgaagat tcatcgcgcg caaacgcgca ttcagcaact ggaatatcgt
     5161 ttagcagaaa ccctgcgcgt acagcttagc gccacgcgtg aacgtttcgg taatgcagta
     5221 acgcacctcg aagccgtaag cccactgtca acgctggcgc gtggatacag cgttactact
     5281 gctactgacg gcaatgtact gaaaaaagtg aagcaagtta aagcgggtga aatgctaacc
     5341 acacgtctgg aagacggctg gatagaaagt gaagttaaaa acatccagcc agtaaaaaaa
     5401 tcgcgtaaaa aggtgcatta agccagcacg aattcaacgc gttttttcga tatcaagcca
     5461 tgcccgtgct gacagaagta atctactgca ccgcaggctt ttaacacctg caacggttga
     5521 tggcagtctg gacaaagagc tttcatttca ataatttccc cgcaggatgg gcaacgcgca
     5581 tggccgttat cctgatcaag cacatgctga cattgtggac aatgcagttc catatgaatt
     5641 cctccggtag ccatccctct acattcatag agggaatggc agataaaata cttacggata
     5701 attatttatt tttcttgatg tgcttcatca gacgcttacg tttacgcatc tgggttggcg
     5761 tcagggtgtt acgcttgttc gcatacgggt tttccccttc tttgaactga atacgaatcg
     5821 gcgatcccat tacgtccagc gatttgcgga agtagttcat caagtagcgc ttgtaggaat
     5881 caggcaggtc tttcacctga ttaccgtgaa tcaccacaat cggcgggtta taaccaccag
     5941 cgtgggcata tttcagcttc acacgacgac cgcgtaccag cggcggttgg tgatcttcaa
     6001 cagccatcgt catgatgcgc gtcagcatag aggtccccac acgacgggtg gagctgtcat
     6061 acgcttcacg tactgattca aacaagttac caacaccact gccgtgcaag gcagagataa
     6121 agtgcacacg agcaaaatcg ataaagccca gacggaagtc cagcgtttct ttcacctgct
     6181 ctttcacttc ctggctcagg ccatcccact tattcaccac aatgacaagt gagcgcccac
     6241 tattgagaat aaagcccagc agcgagagat cctgatcgga aataccttcg cgcgcatcaa
     6301 tcactaacat caccacgttg gcatcttcaa tggcctgcaa cgttttgatt acggagaatt
     6361 tctctacagc atcggtgatt ttgccgcgtt tacgtacgcc agcggtgtca atgagcacat
     6421 actcacgtcc atcgcgttcc attggaatgt agatactgtc acgcgtcgtg ccaggcatgt
     6481 cataaacaac aacgcgctct tcaccaagaa tacggttagt gagtgtagac ttacctacgt
     6541 tcggacgacc cacaatcgcc agtttgatcg gcagactttg cgggtcgaag tcgtcttcct
     6601 cttcttcttc gccgttctct tccacttcaa attgcgccca gtattcagcg tcttcgtcga
     6661 cttcctcttg cggtgcgaga tcttccatcc acggcagcag cacatgctcc agcagactta
     6721 atacgccacg accgtgagac gcggcgatcg ggtagatttc acctaagcca agcgagtaga
     6781 aatcaaccac tgcctgatcg ggatccagac cgtcagtttt gtttgccacc aggaaggtcg
     6841 gtttttcacg ggagcgcaga tgtttggcaa tcgcttcatc tgccggcatc aggcccgcgc
     6901 gcgcatccac cataaacagt acgacgtccg cttcttcaat cgccagcagc gactgttccg
     6961 ccatgcgggt ttctacaccg tcttctgtgc catcaatccc gccggtatca atacagataa
     7021 actcacggcc ttcaatttcc gcacgaccgt acttacggtc acgagtcaga cccgggaaat
     7081 ccgcaaccag cgcatctcgg gtgcgagtta gacggttaaa taacgtggat tttcctacgt
     7141 tagggcgccc gacaagcgcg accacaggta ccatgtttaa agcctcattt ttataaatca
     7201 tcagacaacg cacgctatat tcgcgtcgtt gttaaaaaca ggaaaacggc ccctgtccag
     7261 gagccgtttt caaagtgaac gacagagacg attaacgtgt aatagagtac acggttccgt
     7321 cttttgcctg gatcagcagt ttgccgtcag cggcaaccgg ttcagtctgg aaaccggaac
     7381 tatcaacttt ttgctgggca acgaaacgac catcttcgac attaatccag tgcagataac
     7441 cttcactgtc accgaccacc aggttgccat catacagcac cggagaagtc agcaggcgat
     7501 gcaacagatc gctttgtgtc cacagcgtaa cgccgccatc aatggtcaac gccatcaccc
     7561 ggtcattttg atcgaccaga tagatgcgat tgccgtcgac gatgaaatca ttcaccgaac
     7621 ccagttcgcg tttccacata atctgaccac tgcgcagatc aagcgccgtc aggttaccat
     7681 tataggccag cgcgaaaaca acgccgttaa caacgacggg agtcgtgtca acatcgctca
     7741 gacggtcaat ttcggtagaa ccggtcgcct gggaaatacg ctgctgccaa atcatctggc
     7801 cctgttccat cagcactgcg ctgacgcgac cattatcgcc ccccacgacg gccgcaccaa
     7861 aagccgttgc cggcgcagac tcgccacgca aagagagcga aggcatatcg aggttaactg
     7921 tccatttgac agcgccgtca gcttcgttca gcgcttgtaa ctgaccgtta ctggtgtgga
     7981 ttaacaccag accgtcgctg accaccgggc gcgaaagtgc ttcacccgcg actttagttt
     8041 gccatgccac agtaccatcg ctggtattca gcgcgtaaac ctgcgccttt tcgctgccaa
     8101 tgtagacatg cccaccagac acggtcacac cgccagaaag taatgcaggc tctttagaga
     8161 accagccatc tttctcggcc aggctgacag accagatttc tttgccatca tccgcattca
     8221 gcgcttttac caaaccagcg cggtccgctg catagacaac gttgtccgcc agtgccggat
     8281 gaagattgga atagaagttg ccaatgccgc taccaacgga agtactccac gccgtggtcg
     8341 gcgtaaactg gttttcaacg gttggcaatg gggacatctt taccacatct tcttcgctgt
     8401 taaacagcga acagccgctt aaaagggtaa cggaaagcag tcctggcagc agtaatttac
     8461 gcaattgcat cgggtccctc tcagatggac aaattattaa ttttcatctg catcatttcg
     8521 ctcagtgccg gagtaacatc gcttttcacg cctgcttccc atgcactacg cgcaccttgc
     8581 ttatcacctt tgctcagcaa tgcttcacca cgcaggtcgg caacaatggc agcccaccct
     8641 tcacctttga tggtatcaag ggttttcagc gcggcatcag cctgcttgag ctgtacctga
     8701 acgcgagcaa gacgcagatt tatcacggct ttgagatttt catcgctcgt gtctgccagc
     8761 ccctgttgta actgggcggc agctttctct agttcatttt tgtcaacaaa ttgctgcgca
     8821 agttccaaag aagccagcgc accataagta tttttatttt cagcagcaaa tttttccgcc
     8881 gccgggatgc tatccggttt gccttcgctc actgcggtaa ccgcattttg ataggcaaga
     8941 gaagcggagc gtgcagaatc aacctgatgg ctgttccagt agcgccagcc aatcagtgcg
     9001 ccaacgccca aaatcacccc aacagccagt gctttgccat tttcagcaaa aaagcgttta
     9061 accgcttcta cctggtcgtt ttcgttctcg taaatttcca cgctgtcctt ctccttcctt
     9121 aacccagtaa cgtgcgcaaa tgcgcggcta cgctatcctg cgcaactgcc gtttgctcac
     9181 cagagcgcaa atccttcact actgctgtgc cgttagtcac ttcagactca cccagcacca
     9241 cagcaacgcg ggcaccccat ttatcagcac gggcaaactg tttcttaaag ttgccgccgc
     9301 cgtggttggt catcaatttc acgccctgta attcatcacg cagacgctca gctaatgcca
     9361 tagccgcaga ttgtgtatca gcacctgaag ccaccaggta tatatcgaca ataggatcgg
     9421 ctttaaattc cggattaacg gcctgtacta acaatacaag acgttcgagg cccatcgcaa
     9481 aaccgacagc cggtgttgca cgaccgccca gttgttccac aagaccgtca taacgaccgc
     9541 ctgcacacac ggtgccctgg gagccgagac tgttagtcac ccactcgaaa acggtacggt
     9601 tatagtaatc cagaccacgc accagacgct ggtttacggt gtaagcgatc cccgcgctct
     9661 caagcagttt gcacagaccg gcaaaatgct cacgagattc ctcgtccaga taatcaccta
     9721 atgccggagc gtcgttgaga agcgcctgca cttccggatt ttttgaatcc agcacgcgca
     9781 gcgggttagt gtacatgcgg cgtttgcagt cttcgtccag cttttcttta tgctgctcaa
     9841 ggaatgccac cagcgcatcg cggtaattgg cgcgtgcttc cagcgaaccg atagaattca
     9901 gctcaagagt tacgtgttcg gaaataccca gcgcgcgcca ccagcgggcg gtgagcataa
     9961 tcagttcagc gtcgatatcc ggaccttgca gaccgaaaac ttcgcagccc aactgatgga
    10021 actgacgata acgccctttc tgcggacgct cgtgacggaa catcggcccg atataccaca
    10081 gacgctgttc ctgattgtac agaagaccat gctcgatgcc ggcgcgtaca cagcccgccg
    10141 tcccttcagg gcgcagagtc aggctgtcgc cattgagatc ctcaaaggtg tacatctctt
    10201 tttcaaccac gtcggtgact tcaccaatcg cacgtttgaa tagcggggtc tgctctacaa
    10261 tcggcaagcg gatttcactg taaccgtagc tgccgagcac gtttttcagt gtgccttcaa
    10321 tgcgctgcca gatggccgtt tcgccaggca ggtaatcgtt catgccgcga atggcttgaa
    10381 tgttttttgc cacgtttatt ctctttctga atataaaaat gaaccctcaa cgcttccctc
    10441 aatgtttggg gagccatgcg ggttcaatca tacacgggaa gcgaggcgct tcccatcacg
    10501 ttattatttt tcaacctgct gaacgtcaat tcgacgcgct tcatccagct gactggcttt
    10561 cgcacgaatg cgtgcttcca gctggtcgat catatcgttg ttgtccagac ggtctttgcg
    10621 cacgccatct tcatagaggc cgcttttctt gttgccgccg gtgacgccga gtgtagaaac
    10681 cagcgcctca cctgggccat tcaccacgca gccgataata gaaacgtcca tcggagtgat
    10741 gatatcttcc aggcgttgct ccagcgcgtt aaccgtaccg ataacatcaa attcctgacg
    10801 cgaacaggtc gggcaggcga tgaagttgat ccctcgcgaa cggatacgca gcgatttcaa
    10861 aatatcgaaa ccgactttga tctcttcgac cggatcggcc gccagcgata cgcgcagcgt
    10921 gtcgccgatg ccttcagaca gcagcagacc taaaccaatg gcggatttta ctgccccgct
    10981 gcgtgcacca ccggcttcgg tgatccccag atgcagcggc tgatcgatct gttttgccag
    11041 caaacgataa gactcaacag cgaggaagac gtcagacgct ttcacgctga ctttgaactg
    11101 atcgaagttc aggcgatcga gatgatcaac atgacgcatg gcggattcca gcaacgcctg
    11161 cggcgtcggt tcgccatact tttcttgcag atctttttcc agcgatccgg cgttaacgcc
    11221 aatacggatc ggaatgtttt tatcgcgcgc acagtcaacc accatgcgaa tacgctcttc
    11281 attaccgata ttgccagggt taatacgcag acaatcgacg ccgtattccg ctactttcag
    11341 cgcaatgcga tagtcgaagt ggatgtcagc caccagcggc acgttaaccc gctgtttgat
    11401 gagtttgaac gcttctgccg cgtccatcgt cggtacggag acacggacga tatcagcgcc
    11461 aacgcgttcc agcgccttga tttgattgac cgttgcttcg acatctgtcg tacgcgtatt
    11521 ggtcatggac tgtacggcga tgggagcacc atcgccaatc ggcacattcc caacgtaaat
    11581 acgtgttgat tttctacgtt gaattggagc ctggttatgc atgaaaaatc tcccgcgtta
    11641 cccgtctgtt actgcgccgg tgattgttcg gcattgaggg tcagacgcgc aacctggtta
    11701 gttctgataa aacgactcag atcgacaggt ttcccttgat actggatctg tactgcggct
    11761 ggcgcaccaa ttttcagttt gtacggtgcc tggccggtta agttcaaatt accgtcttta
    11821 cgctgcatac cgctaaacaa ttttttaccg gtagcatcag tgacctccag ccagcaatcg
    11881 gcagtaaagt tcatcaccag cgcattcgga tcagccaccg gcgtggtcac gccagcctga
    11941 tcggttggca acggcgcagc accatctggc gttgttgctg ccgttggtgc cggggtcgcg
    12001 gcggtatcaa catttgcctg cgaaggcgaa acaaccgcat tctgttgcgg atcaacagct
    12061 ggtgctggcg cagttacggc aggtgtttgc gtgttggttg cggtagtatc cacagacgct
    12121 ggcggcgtgg acgttgtagc cgggtctgta gttgtcgacg tatttaacgg aacactctgc
    12181 ccctgctcgc tattactgct cagttccgcc gaagattgat cggccatagt ggtgatctct
    12241 tcctgctgag ctttgtggtc ttgccaccac caggcaccgc tcaggccgat aaccacaaac
    12301 aacaccagcc aggtgaaggt catcagccag ccgtcacgtt ttttgcggcg tttaccgagg
    12361 gaaaaactct gcatcggcgc aactttcgca gcccgtagtg gagcctgctt ttccagccct
    12421 agcagcagtt cttcttctgg aatatgtacc agacgcgcat aagagcggat atatccgcgc
    12481 aggaatgttg aagcaagatc ggcgggtgcc ttatcttctt caatgtcgcg taccgtggaa
    12541 accttcaggc aaagtcgctc ggcaacggcc tgctgactaa gtcctagttg ttcgcgagca
    12601 ttacgcaggc gagcgccggt agtaagtgct tcattttggt cgtgcgtggc ttcagtattc
    12661 attcgctgca ggtacgttta aatgagaatt gagatgccgg tgaaccatca tgctcaccca
    12721 caccgcgaaa catccgttaa gttaaccgtt atcatacagt ataagaccgt ctgtgtgctc
    12781 gtgacaaagc ccacattcac taaggctaac ttactgttgc atcgttacat actgccttaa
    12841 agtcagcaaa aacgcaccgt taatattgac cagacaattg caacttaata cttcattcat
    12901 aaaagattac gccacggtac ataaagtaac cgtggcgtaa tggctatcag accgctttaa
    12961 tgtcgatggc ttcaccctgc atccgtttac gcagggtacg tttcgtacgg tcgataacat
    13021 cgcccgccaa ctgaccacag gcagcatcga tatcatcacc acgagtttta cgcacaatag
    13081 tggtgaaacc gtagctcatc agcacttttg agaaacggtc gatacggctg ttcgaactgc
    13141 gtccatacgg cgcgcccggg aacgggttcc acgggatcag gttgatctta cacggcgtat
    13201 ctttcagcag ctccgccagt tggtgcgcgt gttcagtgcc gtcgttaacg tggtcaagca
    13261 tcacgtattc aatagtgact cggccctgat tggcgttgga tttctccaga taacggcgca
    13321 ccgcagcaag gaacgtttcg atattgtact ttttgttgat cggcacaatt tcgtcacgaa
    13381 tttcgtcgtt cggcgcgtgc agggaaattg ccagtgcaac gtcgatcata tcgcccagtt
    13441 tatccagcgc cggaactaca ccggaagtag aaagcgtgac gcgacgttta gacaggccaa
    13501 aaccgaaatc atccagcatg atttccatcg ccggaacgac gttgttcagg ttgagcagcg
    13561 gctcgcccat gcccatcatc actacgttag tgattgggcg ctgaccggtg acttttgctg
    13621 cgccgacgat tttcgccgca cgccacacct ggccgataat ttccgacacc cgcaggttgc
    13681 gattaaagcc ctgctgggcg gtggaacaga atttacactc cagcgcacac cccacctgcg
    13741 aagagacgca gagcgtggca cggtcgtctt ccgggatata caccgtttcg acgcgctgat
    13801 cgccaacggc gatcgcccat ttaatggtgc cgtcggatga acgctgttct tcaaccactt
    13861 ccggtgcgcg gatttccgcc acctctttca gtttgccgcg caacactttg ttgatgtcgg
    13921 tcatctcatc aaagttgtcg cagcaatagt gatacatcca cttcatcacc tgatcggcgc
    13981 ggaagggttt ttcacctaaa tctttaaaaa actcccgcat ctgctgacgg ttgagatcca
    14041 gcaggttgat ttttccatct ttcgtggtga cgttttcagg tgtgactaat tgttcagaca
    14101 tatgctattc cggcctcgtt attacacgtt atggcccctg gagggttgaa aaaagaaacg
    14161 ccccggtgag cggctgctcg tccgggggcg ctgcattgta caaattctgg cgcacggatg
    14221 ccacgtttgc acgcggcatt tacgaaatta ttaacgggtg cgcgggcaca cttcgccttc
    14281 gccaaagaaa taagcgattt cgcgagcggc agattcgacg gaatcagaac cgtgggtacc
    14341 gttttcggtc aggctgtcag cgtaatcagc gcgcagagta ccagccagtg cgtttgccgg
    14401 attggtcgcg cccagcagat cgcggtgacg ctgaacggcg ttttcacctt ccagcacgga
    14461 aaccacgatc gggccagagg tcatgaattc aaccagacca tcaaagaacg gttttccatc
    14521 gtgttcagca taaaagccac gtgcctgttc aacggtcagg tgcagcattt tggtgccgac
    14581 aattttgaac cctgcagctt caaagcgcgc aaagatatta ccaatgacgt tttttgctac
    14641 cgcgttcggt ttgatgatgg aaaaagtacg ttcaatagcc atttttacct ctgtaaattg
    14701 ttctgttgtt gtctgtacca gcgtacgaga tggcgcggat tataatgagc aacagggccg
    14761 ttgactattg atgaaggtaa cattttttta aaataaaatg aggtttagca acaatcaggg
    14821 acaaaacaga ctattgcatg acaaatttca ctgtcgcgat ttgccccacg tcatccatca
    14881 ccagcaattg ataatcacct ttatccgtca aatgcagggt cacgttgcgc ccgcgttcag
    14941 ttaacggttc gccattcaga aaccaccagc gttcacctgc ccctccactt gattgcaacg
    15001 gcaaagtcgc ttccgctgcg cccggtaaac gtttaataat cgcgccatcg cgaacgcctg
    15061 tcagctgcag cgggagctgg gcatagtgac cgtatggcgg gcaacttgtc gaggccggtg
    15121 gtaagcgcac agcgcgacgt tctgatgcgg gcagccaggg ttccagcggt agcggccaga
    15181 catttatcat ttcttgtcgc gcttgcgggc aatcagcggc aacacgtttg ccattttcat
    15241 ccagccagat ggggaaacga atgccattaa tgccttcctg ctccggcagt aatagagttg
    15301 gcggctgact cccgtccagc agccaggttg ccaggcggcg gcgacagtta ccgtcacctt
    15361 ccggcaaaga ctgtccgccc ggccagcaga taacgccacg agtgactgag ttcgggcgcg
    15421 ggtcttccgg cagattcgca ctgcgcgaca gtaagatatt attgacctga ttcaacaatg
    15481 gtacggcact ggcaaagcca aactgaccaa caacgggcgt gccgtccggt ctgccagtcc
    15541 agatcccaat gacatagcga gcgttaaccc caatcgccca ggcgtcacga tagccatagc
    15601 tggtgcccgt tttccatgcc agtggggcga cgcgcggcaa ggcactatcc ggcaagggtt
    15661 gcgcttcatc agccataatc cggcgaatga tccacgccgc ccccgacgac attaaaggcc
    15721 attcaagcag cggatcgtca ggctgtaagc gcaatttgcc tgccttgccg tggcgagcaa
    15781 acgcggtata cgctgccgcc atatcttcca gttttgcacc agcgccgccg agaatgagtg
    15841 aaagattcgg cgcagcaccg ttgggcaaat ataacggcaa tccaacattg cgtaactttg
    15901 ccgcaaaccg tttcggtcca taggcttcca gcacctgcac agcaggtaag ttcagcgagc
    15961 gcaccagcgc ctcgctcatg ctgatcgggc catgaaaacc gctatcaaag ttacctggtc
    16021 gataatcacc ggtgcgccgg gggacgtctt gcagcagtga tgccgggtgg atcaagcctt
    16081 catccagcgc cagaccataa acaaacggtt tgagcaccga tcctggcgat cggatcgcat
    16141 tgaccatatc aacatgacca aagcgtgaat catcgttgag atcaaccgat cccacccagc
    16201 cgcgaacacg catatcggta tgatcaacca cgatcatcgc cagtgagctg cgcggtggca
    16261 accgcccttt ccagttttgc gccagttctt ccagacgtcg ttgaagaccg gcatccagcg
    16321 tagtaacgat tttgtcgctt ttgcttttac cgagcatcat gcgcgaaaac agcggtgcca
    16381 gttgcggcat ttgtcggggt gccagccaga tgggttcttc ccttgactct tttacctgct
    16441 cacgggacca cacaccttgc acggccatcc gttcgagcac tttattacgc gcggcttcgg
    16501 cacgctccgg ccaacgatcc gggcgcagtc ggctgggcgc ttgcggtaac accgccagca
    16561 ttgccgcctc ggaatagctt aaattcgcag gcgattttcc gagataagcc caacttgccg
    16621 caccgatccc ctgcaacgta ccgccaaacg gagcgcggtt aagatacaag atcagaattt
    16681 cacgcttaga caaatgccac tccagttgca acgcgcgcca gagctggaga attttgccac
    16741 caaatgtttt ggggtgagga tcaagcagac gagcaacctg catagtgagc gtgctgccac
    16801 cagaaataac ccgtcccgaa gtgagatctt gccatgctgc gcgcgccacc gagaatggat
    16861 tcacccccgg atgcttccag aaccagcgat cttcataatt gatcagcgct tcaaggtaac
    16921 gtggagacac atcttcgatt gttaccggat aacgccagat gccatcagca tcggcgaagc
    16981 gccagagcgg cgtaccatcc tgcgccacga ccactcgtgc gggattgact tcatgcagcg
    17041 gtagaggcca gagtttatct gctccccacg ctgcaagaaa aaggagaaat ggcacagctg
    17101 ccagcgttat ccagcagccg cgtttggtta acaagcgaag catttacggt cggacaatca
    17161 gcagatcttc agccgcgccg gtcgcccgcc attggggaac atacattgat tccaccatcg
    17221 gttgcggtac ctgatacgtt cccggcgtca ccgcccgcgc cagatacacc agcgttaccg
    17281 gttggtattc atcaacggca accgccgcca caaagcgatc gtcacggaac tcaatgtgct
    17341 taatgctcgc ctgctgcatc tggttcagta agttttgcac ttcgtcacca ctttgctcca
    17401 ggctggcgct accgttcgcc agattctgat tttccagttc cagacccgca ggcagcagat
    17461 ccacgactaa cgcatccggc acgctgttac tggcttttac ctgcaaccag accagcacca
    17521 gatcgccgct acgtaacgag tccagcgatt tgctcttacc atcagtacca agaatatgac
    17581 gctcgatttg cagcacattg ttcgccggta aaggtgcgga ttgcggataa ccgctggcat
    17641 ccatacgcaa ccataacggc tgatcgccac tgtttctcac ctgcaaggtg gcaagttgat
    17701 cgctattcag attgctgttt agcgttttct cacctgtcag cggctcagct gagaaagagg
    17761 tttgcgcctg ccatttaccc ggtaaatcct gaatcgtacg ggcagccagg aacaacgcgt
    17821 tactttcctg cgtcgatagc cagcgttcac caaacgcctg ctgcgaaagt gtgttcagca
    17881 aagtgtactg ctcatcgggt agcagtttat tttcttccag caaggagagc attaacgcgt
    17941 tgtcgcgcag tggactaccg taatcaccca gccatatccg ctcatcacta tttctcggcg
    18001 ttttcagcgc cagcacaatc gcttcttcac cacgcgttgc atcacccatg gttttcagcg
    18061 caatgccaag ttgcagcagc ggtaaaccag aagcggcatc tgcacgatgc tcccagattt
    18121 cacgcagcgc acccagtggt gctttttgct gacgggccag caccagcgca gcgtaagact
    18181 gaacggcgaa tttactggct ttgagattat ccgcgtacgg gatcgacatc atgcccggat
    18241 cttgtaaata gcgcagcaga cgctcattac cccggttaat ggcgtctgtc ggcacgctgt
    18301 aaccctgttc gcctgcgcgg accaggaaat ccatcacgta agccgtcagc cagtactctt
    18361 cgtcaccgtt tttatcccac agcgcaaagc cgccgttatc acgttgcatt tgcagcaaac
    18421 gggaaatgcc gatatcgacc gatgcacggc gtttctcatc actgtcgcct ttgatgccca
    18481 acgcctgcag ttgggctgcg ttggtataaa gtgacgggaa caggccgctg gcggtttgct
    18541 caagacagcc gtacggatac gcttttaact ctttgatata acgtgcaatg ttcagcggtg
    18601 gtttgccgct caacaacaat tgcccttcca gcgtaacagg cgagaagttt tgcaatccat
    18661 ccgccggaat cgcccatgtc tcaccaggct gtaacgccgt accgtaatta accgtttgtg
    18721 ccgggaacgc cggacggacg ccgattttcc actgcttatg ctgatcggca acggtttcac
    18781 ccggtaacgc taacccgcta atggtggcct gaatttctcc atcgccataa cccggcaatg
    18841 ctcgcaccgg gataaacagc gtagtacgca cacctggcgc taattcaacg gctgcgggtg
    18901 aatcgctgac cagttcaagc aaaccactgg cggtcagggc aacgttcagt ttttgcggtt
    18961 tatcggtaag attagtgata tccagcgtca gacgcgaggt atcgccactc gccataaagc
    19021 gcggcatgtt cagttcagca atcaccggtg cggcaactat cactttgctt tcgttgctac
    19081 cgaaatcatc tgccgtccag gcttgcgcca tgacgcgcaa ttcaccgtta aaatcgccaa
    19141 tcggcagtgt aaccgagcct tcgccctgtt cgttgagcgt taccggcagc gcctgctgcg
    19201 cgacaatatt gacgtgattg accagcggtt taccaccacg tttcagctca tcaccatcgc
    19261 caccgaaacg cagagctgcc agacgcccct gaccttcaat aacctgaccg taaatatcgt
    19321 aaatgtctgc gccatagcgt ttctgaccaa agaacgcctg ccacggatct ggcgtgacgt
    19381 agtcagtaat attcagcaca ccactatcaa cggcagacac cagcacattc acctgtttag
    19441 gcttctcgcc atttttagtg ctggctttaa ttttcacggt taatggttga ttgggacgca
    19501 tttttgctgg tgtttccagc gccagatcga ggcgacggtt ttcatcgcca agcggcagat
    19561 gcaacacacc aaccgcgcgt tttggcgtcg cggagcgaga tttatcgcta ggacgtacca
    19621 ccagcgtact taaatacaga tcatgacgat tccaggtttt atcgaccgga atcgtcagat
    19681 ccagcccttg agccggaaca tcaatctctt gccaccacag cggcccttca ctggactcga
    19741 ccatcgcata acctttaccc gccgttggcg cggcgatatg caacttaatg gtgtcgccag
    19801 ggcgataact ggctttatcc agtttcagcg tgacacggtc gggtcgcact gcgccgctac
    19861 cgtcgctgtt gtcctgccaa ctatagccag cccagaaacg aacactactg accgcttcat
    19921 tcggcgcttt gacttccaga cgataagcgc cccactctac cggaaaactg accttgccgg
    19981 tttcgtccgc tttcagatcc agagtttgtt cattttcgat cagatctttt tgatcaaact
    20041 gtgactgcca gccttcatct tctgaccagt tccagtagta atcgcggcgt tcgcgaatca
    20101 ggcgcacctg caagcccgac acggcttttt tcacgccttg tgcatcgcta taaacgatgt
    20161 caaaagcggc gttactgcct tcatcaacaa tgggctgttt caccgtgctg tcagtgcgat
    20221 aatcgtaaac cgatttcaag gcgaactgcg gacggagccc cggcaatgca ttggcaggcc
    20281 agatagcctg ctcagcgcgg cgcgtcaccg ggcgaccgcc cgattccagc aaactgccct
    20341 ggaaaataac ctgcaatggg gaatgcgttt ccttccactg gctttctgta gaaacttcgc
    20401 cgcgcccttt atcatccagc gtcaactgaa cttcatccag cgtgcgggaa aggttttcgg
    20461 cagctatatc gccgaattca aaaccaggta aggctgacac agcctcacgc agtgggcgca
    20521 ggaaaagttg cccttgcaaa gtattaccat tagcaggcgc accgtacagg tagtatccca
    20581 ccacggagaa tttcacttca tcattcggcg taagcggggt tttctcaccg gtcagattca
    20641 gcgccatacg ctctggcata aaatcttcga cgtggaaatc ccacatccgg tactggttat
    20701 cgcccgtgtt ggcgcgaata tgccacatac cggttgccgc attgctatcg agtggccagg
    20761 taaagtggta gaggccattc tccggctgac taacgacgct cctgagtacc tgcccgtcag
    20821 gtttaatcac gtctaacttg atgggttgat cgggcaatgc tttaccgtct gcatcgcgca
    20881 gtaaaccatt gaggattacc gtttcacctg ggcgataaag atcgcgtggg ccaaacatga
    20941 aaaactgttt gctatagcct ggcgcgccag caatgttaaa ttctgctaag tccagcgccg
    21001 gaagttttaa atcgagtagc gttgtctgac cgtctttacg tgccagcagt aatgccgcat
    21061 ttttatcatt ttccagctgc acatgcccct gagcgtcact ggttgcctga gtcagagtct
    21121 gccctttctc atttaataaa gagacttcaa ttccttgctg ggccgcgccg ttttccagac
    21181 tttgggtaaa gatatccaga cgattgtgat aacggtgagc tgaaacgccg atatcactta
    21241 acgtaaacag cgtcgcggga ttactgtaat cgtaacgtcc agcctgattc atcacagcca
    21301 gatacacgcc cgcctgctga agcggtttga tatcgcccag cggcagcaat aatttttcac
    21361 gggtgttacg cgcaggattg agatcaaacc gtccggtgta gaccagatcc gccatctgca
    21421 gcagtttgtc tgactgccag ttcgccagcg aattgcggta ttcccattgg ctaatgaatg
    21481 ctggcagaga ttctggctta acgcggaaga agttaacatc gacattatta acgttgagcg
    21541 ccattaccgg cagcccttca acgactttgc caggcagcag cgaaccacgg ctggcaaaac
    21601 cgacgctggg ttggatgtcg cgggtagtta tagttttttc gtaatcttta ctgaaggttg
    21661 cgttgttgag tgctttgacc tccttgccaa tagtaacgat caaatcacgt ttcggttcga
    21721 ggtggcgtaa acgtagctct ttaagattat ctgacagctc ccaggcacca tccactttgc
    21781 cgcttttttt atcgacgaca tgaataacgc gtgagaaatc ctgatccggg tcgagaggga
    21841 tggagaacgt cagcaccagc gtggctgcac catcaagttg gacttcagag agatccagca
    21901 atgtcagcac cttaccggca ctctgttggg ccagtttttg tctctccggc acggagagtt
    21961 ttgctgaact cgcgttttct gaagaggccg ctttagtaac ttcagaaggc gcatcttttt
    22021 tcaccgctgt tggcgcgtta tcgttgttgt cgcaccctgc cagcgccagc attagcatgc
    22081 aggcggctac gcgtaacttt ttcatttttc atccctgcca caatggcccg ttagcaacgt
    22141 cgaataatta ttatgcgtga gaatttacgt tatgtaattc agta
//
LOCUS       DADKRT010000059        22105 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.060, whole genome shotgun sequence.
ACCESSION   DADKRT010000059 DADKRT010000000
VERSION     DADKRT010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22105
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.060"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            10..360
                     /locus_tag="JQ356_001862"
     CDS             10..360
                     /locus_tag="JQ356_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011111453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric transport protein MerT"
                     /protein_id="HAY4621974.1"
                     /translation="MSEPQNGRGALFAGGLAAILASTCCLGPLVLVALGFSGAWIGNL
                     TVLEPYRPLFIGAALVALFFAWKRIYRPVQACKPGEVCAIPQVRATYKLIFWIVAVLV
                     LVALGFPYVVPFFY"
     gene            374..649
                     /gene="merP"
                     /locus_tag="JQ356_001863"
     CDS             374..649
                     /gene="merP"
                     /locus_tag="JQ356_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system periplasmic binding
                     protein MerP"
                     /protein_id="HAY4621975.1"
                     /translation="MKKLFASLALAAAVAPVWAATQTVTLAVPGMTCAACPITVKKAL
                     SKVEGVSKVDVGFEKREAVVTFDDTKASVQKLTKATADAGYPSSVKQ"
     gene            685..1107
                     /gene="merC"
                     /locus_tag="JQ356_001864"
     CDS             685..1107
                     /gene="merC"
                     /locus_tag="JQ356_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organomercurial transporter MerC"
                     /protein_id="HAY4621976.1"
                     /translation="MGLMTRIADKTGALGSVVSAMGCAACFPALASFGAAIGLGFLSQ
                     YEGLFISRLLPLFAALAFLANALGWFSHRQWLRSLLGMIGPAIVFAATVWLLGNWWTA
                     NLMYVGLALMIGVSIWDFVSPAHRRCGPDGCELPAKRL"
     gene            1159..2853
                     /locus_tag="JQ356_001865"
     CDS             1159..2853
                     /locus_tag="JQ356_001865"
                     /EC_number="1.16.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004636758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury(II) reductase"
                     /protein_id="HAY4621977.1"
                     /translation="MSTLKITGMTCDSCAVHVKDALEKVPGVQSADVSYAKGSAKLAI
                     EVGTSPDALTAAVAGLGYRATLADAPSVSTPGGLLDKMRDLLGRNDKTGSSGALHIAV
                     IGSGGAAMAAALKAVEQGARVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESP
                     FDGGIAATTPTIQRTALLAQQQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNL
                     IVQLNDGGERVVAFDRCLIATGASPAVPPIPGLKDTPYWTSTEALVSETIPKRLAVIG
                     SSVVALELAQAFARLGAKVTILARSTLFFREDPAIGEAVTAAFRMEGIEVREHTQASQ
                     VAYINGEGDGEFVLTTAHGELRADKLLVATGRAPNTRKLALDATGVTLTPQGAIVIDP
                     GMRTSVEHIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALNLTAMPAVVFTDPQV
                     ATVGYSEAEAHHDGIKTDSRTLTLDNVPRALANFDTRGFIKLVVEEGSGRLIGVQAVA
                     PEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCCAG"
     gene            2871..3233
                     /gene="merD"
                     /locus_tag="JQ356_001866"
     CDS             2871..3233
                     /gene="merD"
                     /locus_tag="JQ356_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance co-regulator MerD"
                     /protein_id="HAY4621978.1"
                     /translation="MSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDD
                     AALQRLCFVRAAFEAGIGLDALARLCRALDAADGAQAAAQLAVLRQLVERRRAALAHL
                     DAQLASMPAERAHEEALP"
     gene            3230..3466
                     /gene="merE"
                     /locus_tag="JQ356_001867"
     CDS             3230..3466
                     /gene="merE"
                     /locus_tag="JQ356_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="broad-spectrum mercury transporter MerE"
                     /protein_id="HAY4621979.1"
                     /translation="MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTA
                     GAFLGEHWGVAALALTGLFVLAVTRLLRAFRGGS"
     gene            3502..4170
                     /locus_tag="JQ356_001868"
     CDS             3502..4170
                     /locus_tag="JQ356_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY4621980.1"
                     /translation="MAQAAARGQLDLHYQPLVDLRDHRIAGAEALMRWRHPRLGLLPP
                     GQFLPLAESFGLMPEIGAWVLGEACRQMHKWQGPAWQPFRLAINVSASQVGPTFDDEV
                     KRVLADMALPAELLEIELTESVAFGNPALFASFDALRAIGVRFAADDFGTGYSCLQHL
                     KCCPITTLKIDQSFVARLPDDARDQTIVRAVIQLAHGLGMDVIFRRRLHQLIGRNGCC
                     AASS"
     gene            4209..5924
                     /locus_tag="JQ356_001869"
     CDS             4209..5924
                     /locus_tag="JQ356_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HAY4621981.1"
                     /translation="MLNTRVHQSEVSMATDTPRIPEQGVATLPDEAWERARRRAEIIS
                     PLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRL
                     PEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPR
                     KVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLT
                     LAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLL
                     YLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTF
                     SNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGV
                     PAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADALKPWIARRERWPSFLIRRDP
                     RDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMI
                     GQMREIVTSAQKATRKARRDADRRQHLKTSARPDKPVPPDTDIADPQADNLPPAKPFD
                     QIEEW"
     gene            5927..6787
                     /locus_tag="JQ356_001870"
     CDS             5927..6787
                     /locus_tag="JQ356_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY4621982.1"
                     /translation="MDEYPIIDLSHLLPAAQGLARLPADERIQRLRADRWIGYPRAVE
                     ALNRLEALYAWPNKQRMPNLLLVGPTNNGKSMIVEKFRRTHPASSDADQEHIPVLVVQ
                     MPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAG
                     NSVNRREFLNLLRFLGNELRIPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDD
                     CCSLLASFAASLPLRRPSPIATLDMARYLLTRSEGTIGELAHLLMAAAIVAVESGEEA
                     INHRTLSMAC"
     gene            complement(6838..8382)
                     /locus_tag="JQ356_001871"
                     /pseudo
     CDS             complement(6838..8382)
                     /locus_tag="JQ356_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558248.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS1353 family transposase"
     gene            8505..10028
                     /locus_tag="JQ356_001872"
     CDS             8505..10028
                     /locus_tag="JQ356_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001324342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element IS1326 family transposase"
                     /protein_id="HAY4621983.1"
                     /translation="MINVAILSAIRRWHFRDGASIREIARRSGLSRNTVRKYLQSKVV
                     EPQYPARDSVGKLSPFEPKLRQWLSTEHKKTKKLRRNLRSMYRDLVALGFTGSYDRVC
                     AFARQWKDSEQFKAQTSGKGCFIPLRFACGEAFQFDWSEDFARIAGKQVKLQIAQFKL
                     AHSRAFVLRAYYQQKHEMLFDAHWHAFQIFGGIPKRGIYDNMKTAVDSVGRGKERRVN
                     QRFTAMVSHYLFDAQFCNPASGWEKGQIEKNVQDSRQRLWQGAPDFQSLADLNVWLEH
                     RCKALWSELRHPELDQTVQEAFADEQGELMALPNAFDAFVEQTKRVTSTCLVHHEGNR
                     YSVPASYANRAISLRIYADKLVMAAEGQHIAEHPRLFGSGHARRGHTQYDWHHYLSVL
                     QKKPGALRNGAPFAELPPAFKKLQSILLQRPGGDRDMVEILALVLHHDEGAVLSAVEL
                     ALECGKPSKEHVLNLLGRLTEEPPPKPIPIPKGLRLTLEPQANVNRYDSLRRAHDAA"
     gene            10018..10800
                     /locus_tag="JQ356_001873"
     CDS             10018..10800
                     /locus_tag="JQ356_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004630242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY4621984.1"
                     /translation="MQHEGHVRILKSLKLFGMAHAIEELGNQNSPAFNQALPMLDSLI
                     KAEVAEREVRSVNYQLRVAKFPVYRDLVGFDFSQSLVNEATVKQLHRCDFMEQAQNVV
                     LIGGPGTGKTHLATAIGTQAVMHLNRRVRFFSTVDLVNALEQEKSSGRQGQIANRLLY
                     ADLVILDELGYLPFSQTGGALLFHLLSKLYEKTSVILTTNLSFSEWSRVFGDEKMTTA
                     LLDRLTHHCHILETGNESYRFKHSSTQNKQEEKQTRKLKIET"
     gene            complement(10976..11476)
                     /locus_tag="JQ356_001874"
     CDS             complement(10976..11476)
                     /locus_tag="JQ356_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4621985.1"
                     /translation="MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARI
                     DRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHA
                     GRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAE
                     RLELEI"
     gene            complement(11604..12443)
                     /gene="sul1"
                     /locus_tag="JQ356_001875"
     CDS             complement(11604..12443)
                     /gene="sul1"
                     /locus_tag="JQ356_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000259031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul1"
                     /protein_id="HAY4621986.1"
                     /translation="MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDV
                     GPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLND
                     IQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSAL
                     RRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGAT
                     VGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGL
                     DHA"
     gene            complement(12437..12784)
                     /locus_tag="JQ356_001876"
     CDS             complement(12437..12784)
                     /locus_tag="JQ356_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacE delta 1"
                     /protein_id="HAY4621987.1"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
     gene            complement(12989..13792)
                     /locus_tag="JQ356_001877"
     CDS             complement(12989..13792)
                     /locus_tag="JQ356_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032488483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-5 family class D beta-lactamase OXA-129"
                     /protein_id="HAY4621988.1"
                     /translation="MKTIAAYLVLVFFAGTALSESISENLAWNKEFSSESVHGVFVLC
                     KSSSNSCTTNNATRASTAYIPASTFKIPNALIGLETGAIKDARQVFKWDGKPRAMKQW
                     EKDLTLRGAIQVSAVPVFQQIARDIGKKRMQKYLNLFSYGNANIGGGIDKFWLEGQLR
                     ISAVNQVKFLESLYLNNLPASKANQLIVKEAIVTEATPEYIVHSKTGYSGVGTESNPG
                     VAWWVGWVEKGTEVYFFAFNMDIDNESKLPSRKSIPTKIMASEGIIIGG"
     gene            complement(13888..14385)
                     /locus_tag="JQ356_001878"
     CDS             complement(13888..14385)
                     /locus_tag="JQ356_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004187529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA21"
                     /protein_id="HAY4621989.1"
                     /translation="MNPESVRIYLVAAMGANRVIGNGPDIPWKIPGEQKIFRRLTESK
                     VVVMGRKTFESIGKPLPNRHTVVLSRQARYSAPGCAVVSTLSQAIAIAAEHGKELYVA
                     GGAEVYALALPHANGVFLSEVHQTFEGDAFFPVLNAAEFEVVSSETIQGTITYTHSVY
                     ARRNG"
     gene            14530..15543
                     /gene="intI1"
                     /locus_tag="JQ356_001879"
     CDS             14530..15543
                     /gene="intI1"
                     /locus_tag="JQ356_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 integron integrase IntI1"
                     /protein_id="HAY4621990.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVNWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQ
                     EIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
                     DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALER
                     KYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATP
                     HTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLT
                     SER"
     gene            15746..16096
                     /locus_tag="JQ356_001880"
     CDS             15746..16096
                     /locus_tag="JQ356_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000454193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3330 domain-containing protein"
                     /protein_id="HAY4621991.1"
                     /translation="MEVVAEGVETPDCLAWLRQAGCDTVQGFLFARPMPAAAFVGFVN
                     QWRNTTMNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATE
                     TSVKPDACDSPPSG"
     gene            16222..16407
                     /locus_tag="JQ356_001881"
                     /pseudo
     CDS             16222..16407
                     /locus_tag="JQ356_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004213255.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            16453..17157
                     /locus_tag="JQ356_001882"
     CDS             16453..17157
                     /locus_tag="JQ356_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HAY4621992.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYAAIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     gene            17167..17610
                     /locus_tag="JQ356_001883"
     CDS             17167..17610
                     /locus_tag="JQ356_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY4621993.1"
                     /translation="MRQKAASSLTLQQCPGDTVVVHSMDRLARNLDDLRRIVQTLTQR
                     GVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRG
                     RKKSLSSERIAELRQRVEAGEQKTKLAREFGISRETLYQYLRTDQ"
     gene            17613..20579
                     /locus_tag="JQ356_001884"
     CDS             17613..20579
                     /locus_tag="JQ356_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs3 family transposase"
                     /protein_id="HAY4621994.1"
                     /translation="MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRG
                     PANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRRE
                     HLSELQTVFGFRPFTMSHYRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALN
                     AVERASAEAITRANRRIYDALAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKP
                     NSRHMLEHIERLKAWQALDLPTGIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYA
                     TLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIG
                     QALIDAKQSGRDAFAAIEAIMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRY
                     APEFLAVLKLRAAPAAKNVLDAIEVLRGMNTDNARKLPADAPTGFIKPRWQKLVMTDA
                     GIDRRYYELCALSELKNSLRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSELPLAV
                     ATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQALI
                     DQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLT
                     KMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTSSSDGQ
                     NFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVLDGLLY
                     HESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKP
                     MIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRI
                     ERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASG
                     LNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSA
                     KIGAGKFRPLRPLQPA"
     gene            20646..21023
                     /locus_tag="JQ356_001885"
     CDS             20646..21023
                     /locus_tag="JQ356_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4621995.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
     gene            complement(21224..21883)
                     /locus_tag="JQ356_001886"
     CDS             complement(21224..21883)
                     /locus_tag="JQ356_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HAY4621996.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
BASE COUNT         4647 a         6526 c         6420 g         4512 t
ORIGIN      
        1 ggccaacgta tgtctgaacc acaaaacggg cgcggtgcgc tcttcgccgg cgggctggcc
       61 gccattcttg catcgacctg ctgcctgggg ccgctagtac tggtcgccct gggcttctcc
      121 ggtgcttgga tcggcaacct gacggtgctg gaaccctatc gaccgttgtt catcggcgcg
      181 gcgctagtgg cgctgttctt cgcctggaag cggatttacc ggcccgtgca ggcatgcaag
      241 ccaggtgagg tctgcgcgat tccgcaggtg cgcgccacct acaagctgat tttctggatc
      301 gtggccgtgc tggtcctggt cgcgcttgga tttccctatg tcgttccatt tttctattaa
      361 ccaggagttc atcatgaaga aactgtttgc ctcccttgcc ctcgccgccg ctgttgcccc
      421 ggtgtgggcc gctacccaga ccgtcacgct agcggttccc ggcatgactt gcgccgcctg
      481 cccgatcaca gtcaagaaag cgctctccaa ggtcgaaggc gtgagcaagg tcgatgtggg
      541 cttcgagaag cgcgaggccg tcgtcacttt tgacgacacc aaggccagcg tacagaagct
      601 gaccaaggcc accgcagacg ccggctatcc gtccagcgtc aagcagtgag ccagcaagcc
      661 aacgacaaca gcgagagccg cttcatggga ctgatgacac gcattgccga taaaaccggc
      721 gcgctcggca gcgtcgtttc cgcgatgggc tgcgccgcct gctttccagc cctcgccagc
      781 ttcggcgcgg ccatcgggct gggcttcttg agccagtacg agggactgtt catcagccgc
      841 ctgctgccgc tgtttgccgc gctggccttc ctggcgaacg cgctgggttg gttcagtcat
      901 cggcaatggc tgcgcagtct gctcggcatg atcggcccgg ccatcgtgtt tgcggccacg
      961 gtctggctgc tcggcaactg gtggacggcg aacctgatgt acgtcggcct ggccttgatg
     1021 attggggtgt cgatctggga cttcgtgtcg ccggcgcatc gccgttgcgg accggacggc
     1081 tgcgaactcc ccgccaagcg cttgtgaaag acggctgacc gtgcgacacg gcggcccaca
     1141 cgaataagga acgatggtat gagcactctc aaaatcaccg gcatgacttg cgactcgtgc
     1201 gcagtgcatg tcaaggacgc cctggagaaa gtgcccggcg tgcaatcagc ggatgtctcc
     1261 tacgccaagg gcagcgccaa gctcgccatt gaggtcggca cgtcacccga cgcgctgacg
     1321 gccgctgtag ctggactcgg ttatcgggcc acgctggccg atgccccctc agtttcgacg
     1381 ccgggcggat tgctcgacaa gatgcgcgat ctgctgggca gaaacgacaa gacgggtagc
     1441 agcggcgcat tgcatatcgc cgtcatcggc agcggcgggg ccgcgatggc agcggcgctg
     1501 aaggccgtcg agcaaggcgc acgtgtcacg ctgatcgagc gcggcaccat cggcggcacc
     1561 tgcgtcaatg tcggttgtgt gccgtccaag atcatgatcc gcgccgccca tatcgcccat
     1621 ctgcgccggg aaagcccgtt cgatggcggc atcgccgcta ccacgccgac catccagcgc
     1681 acggcgctgc tggcccagca gcaggcccgc gtcgatgaac tgcgccacgc caagtacgaa
     1741 ggcatcttgg agggcaatcc ggcgatcact gtgctgcacg gctccgcccg ctttaaggac
     1801 aatcgcaacc tgatcgtgca actcaacgac ggcggcgagc gcgtggtggc attcgaccgc
     1861 tgcctgatcg ccaccggcgc gagcccggcc gtgccgccga ttcccggcct gaaagacact
     1921 ccgtactgga cttccactga agcgctggtc agcgagacga ttcctaagcg cctggccgtg
     1981 attggctcat cagtggtggc gctggagctg gcgcaggcgt tcgcccgact cggagcgaag
     2041 gtgacgatcc tggctcgcag cacgctgttc ttccgcgaag acccagctat aggcgaagcc
     2101 gtcacggccg cattccgcat ggagggcatc gaggtgaggg aacacaccca ggccagccag
     2161 gtcgcgtata tcaatggtga aggggacggc gaattcgtgc tcaccacggc gcacggcgaa
     2221 ctgcgcgccg acaagctgct ggtcgccacc ggccgcgcgc ccaacacacg caagctggca
     2281 ctggatgcga cgggcgtcac gctcaccccg caaggcgcta tcgtcatcga ccccggcatg
     2341 cgtacaagcg tggaacacat ctacgccgca ggcgactgca ccgaccagcc gcagttcgtc
     2401 tatgtggcgg cagcggccgg cactcgcgcc gcgatcaaca tgaccggcgg tgacgcggcc
     2461 ctgaacctga ccgcgatgcc ggccgtggtg ttcaccgacc cgcaagtggc gaccgtaggc
     2521 tacagcgagg cggaagcgca ccatgacggc atcaaaactg atagtcgcac gctaacgctg
     2581 gacaacgtgc cgcgcgcgct cgccaacttc gacacgcgcg gcttcatcaa actggtggtt
     2641 gaagaaggca gcggacgact gatcggcgtg caggcagtgg ccccggaagc gggcgaactg
     2701 atccagacgg ccgcactggc gattcgcaac cggatgacgg tgcaggaact ggccgaccag
     2761 ttgttcccct acctgacgat ggtcgaaggg ttgaagctcg cggcgcagac cttcaacaag
     2821 gatgtgaagc agctttcctg ctgcgccggg tgaggacaag gaggtgtgcg atgagcgcct
     2881 acacggtatc gcaactggcc cataacgctg gggtgagcgt acatatcgtg cgcgactacc
     2941 tggtgcgcgg cttgttacgg ccggtggcct gcaccacggg cggctacggc gtgttcgacg
     3001 atgcggcctt gcaacggctg tgcttcgtgc gcgcggcctt cgaggcgggt atcggcctgg
     3061 atgccctggc gcggctgtgc cgtgcgctcg acgcagcgga cggcgcacaa gccgcagcgc
     3121 agcttgccgt gctgcgccag ttggtcgagc ggcggcgcgc ggcgttggcc catctggacg
     3181 cgcaactggc ctccatgcca gccgagcggg cgcacgagga ggcattgccg tgaacgcccc
     3241 tgacaaactg ccgcccgaga cgcgccaacc cgtttccggc tacctgtggg gtgcgctggc
     3301 cgtgttgacc tgcccctgcc atctgccgat tctcgccgcc gtgctggccg ggacgaccgc
     3361 cggtgccttc cttggcgagc attggggtgt tgccgcgctc gcgctgaccg gcttgttcgt
     3421 tctggccgta acgcggctgc tgcgcgcctt ccggggcgga tcatgacgag ttcgcagccc
     3481 gccggatgga cggcggccga gttggcgcag gcggcggcgc gcggacagct tgacctgcat
     3541 taccagccgc tggtcgatct gcgcgatcac cggatcgctg gcgcggaagc gttgatgcgc
     3601 tggcggcatc cgaggcttgg cctgttgccg cccggccagt tcctgccgct ggccgagtcg
     3661 ttcggcctga tgccggaaat aggcgcgtgg gtgctgggcg aggcctgtcg ccagatgcac
     3721 aagtggcaag gaccggcatg gcaaccgttc cgtcttgcca tcaatgtgtc cgccagccag
     3781 gttgggccaa cgttcgacga cgaggtaaag cgggtgctgg ccgatatggc cctgcccgcc
     3841 gagcttctgg agatcgaact gaccgaatcg gtcgcattcg gcaatccagc cctgttcgcc
     3901 agtttcgacg ccttgcgcgc catcggcgtg cgcttcgccg ccgacgactt cggcaccggc
     3961 tattcctgcc tgcaacatct gaaatgctgc cccatcacca cattgaaaat cgaccaatcc
     4021 tttgtcgcca ggctcccgga tgatgcccgt gaccaaacta tcgtgcgggc ggtgatccag
     4081 ctcgcgcacg ggctgggcat ggatgtcatt ttcagaagac gactgcacca gttgattggg
     4141 cgtaatggct gttgtgcagc cagctcctga cagttcaata tcagaagtga tctgcaccaa
     4201 tctcgactat gctcaatact cgtgtgcacc aaagcgaggt gagcatggcg acggacaccc
     4261 cacggattcc agaacaaggc gtggccactc tgcctgatga ggcttgggag cgtgcgcgcc
     4321 gtcgtgcgga gatcatcagt ccgttggcgc agtcggagac ggtcgggcac gaagcggccg
     4381 atatggcggc tcaggcgctg ggcttgtctc ggcgccaggt atacgttctg atccggcgtg
     4441 cccggcaagg cagcggcctc gtgacggatc tggtgcccgg ccagtccggt ggaggtaaag
     4501 gtaaggggcg cttgccggaa ccggtcgagc gcgtcatcca cgagctactg caaaagcggt
     4561 tcctgaccaa gcagaagcgc agcctagcgg cctttcaccg cgaagtcact caggtgtgca
     4621 aggctcaaaa actgcgagtg ccggcgcgca ataccgtggc cttacggatc gctagccttg
     4681 acccgcgcaa ggtcatccgc cggcgggaag gccaggatgc cgctcgtgac ctacaaggtg
     4741 tgggcggcga gcctcctgcc gtgaccgcgc cgctggagca ggtgcagata gaccatacgg
     4801 tcatcgacct gatcgtggtc gatgaccgcg accggcaacc tattggccgc ccgtacctga
     4861 ccctcgccat cgacgtgttc acccgctgcg tgctcggcat ggtcgtcacg ctggaagcgc
     4921 cgtctgccgt ttcggttggc ctgtgcctcg tgcatgtcgc ctgcgacaag cgcccttggc
     4981 tggaaggact gaacgtggaa atggattggc agatgagcgg caagcccttg ctgctctacc
     5041 tagacaacgc ggccgagttc aagagcgagg ccctgcgccg gggttgcgag cagcatggca
     5101 tccggctgga ctatcgcccg ctgggacagc cgcactatgg cggcatcgtg gaacggatca
     5161 tcggcacggc gatgcagatg attcacgacg aactgccggg aacgaccttc tccaaccctg
     5221 accagcgcgg cgactacgat tccgaaaaca aggccgccct gacgctgcgc gagctagagc
     5281 gctggctcac attggcggtc ggcacctacc acggttcggt gcacaacggc ctgctccaac
     5341 cgccggccgc gcgctgggcc gaggccgtgg cgcgtgtcgg cgtaccggcc gtcgtcacac
     5401 gcgctacttc gttcctggtc gattttctgc cgatcctccg gcgcacgctg acccgcaccg
     5461 gctttgtcat cgaccacatc cactactacg ccgatgcgct caagccgtgg attgcgcggc
     5521 gtgaacgctg gccgtccttt ctgatccggc gcgatccgcg cgacatcagc cgtatctggg
     5581 tcctggaacc ggagggacag cattacctgg aaattcccta ccgtaccttg tcgcatccgg
     5641 ctgtcaccct ctgggaacaa cggcaggcgc tggcgaaact gcggcagcaa gggcgcgaac
     5701 aggtggatga gtcggcgctg ttccgcatga tcggccagat gcgtgagatt gtgaccagcg
     5761 cgcagaaggc cacacgcaag gcgcggcgtg acgcggatcg ccgccagcac ctcaagacat
     5821 cagctcggcc ggacaagccc gttccgccgg atacggatat tgccgacccg caggcagaca
     5881 acttgccacc cgccaaaccg ttcgaccaga ttgaggagtg gtagccgtgg acgaatatcc
     5941 catcatcgac ctgtcccacc tgctgccggc ggcccagggc ttggcccgtc ttccggcgga
     6001 cgagcgcatc cagcgccttc gcgccgaccg ctggatcggc tatccgcgcg cagtcgaggc
     6061 gctgaaccgg ctggaagccc tttatgcgtg gccaaacaag caacgcatgc ccaacctgct
     6121 gctggttggc ccgaccaaca atggcaagtc gatgatcgtc gagaagttcc gccgcaccca
     6181 cccggccagc tccgacgccg accaggagca catcccggtg ttggtcgtgc agatgccgtc
     6241 cgagccgtcc gtgatccgct tctacgtcgc gctgctcgcc gcgatgggcg cgccgctgcg
     6301 cccacgccca cggttgccgg aaatggagca actggctctg gcactgctgc gcaaggtcgg
     6361 cgtgcgcatg ctggtgatcg acgagctgca caacgtgctg gccggcaaca gcgtcaaccg
     6421 ccgggaattc ctcaacctgc tgcgcttcct cggcaacgaa ctgcgcatcc cgttggttgg
     6481 ggtaggcacg cgcgacgcct acctagccat ccgctccgat gaccagttgg aaaatcgctt
     6541 cgagccgatg atgctgccgg tatgggaggc caacgacgat tgctgctcac tgctggccag
     6601 cttcgccgct tcgctcccgc tgcgccggcc ttccccaatt gccacgctgg acatggctcg
     6661 ctacctgctc acacgcagcg agggcaccat aggggaactg gcgcacttgc tgatggcggc
     6721 ggccatcgtc gccgtggaga gcggcgagga agcgatcaac catcgcacac tcagcatggc
     6781 ctgttgagtt gcatctaaaa ttgacccact gggggtgcgg acgatttctt ggacggttta
     6841 tacggacatc aatccgaccg catgacgata ctcgatggga ctacgcccgc caagcgacac
     6901 tttgatgcgg cgctcgttgt accagtggat ataggcatcg attcgcgtca tgaggtcttt
     6961 cagcgtcacg tgctgccaat tcctcgggta gattagttcg gtcttcaatc gtccgaaaaa
     7021 gccctcgcat gcagcattgt ctggcgagca gccctttttg gacatcgacc gcgttaattg
     7081 ggcattttca gtgcggcgga tccacgcagg ccagcgataa tgcgagcccc tgtccgaatg
     7141 gataaccgga tgctcaccgg gtcgcagtgt ccgtaccgcg tgatccagca tggtattgac
     7201 caggttcgca tccgggctgg tgccgatatt ccaggccacc accagcccat cgaagcaatc
     7261 gacgatcggc gagacgtaga ccttccctgc cggaatgtgt atttccgtca gatcggtcaa
     7321 ccatttcgta ttcggcgccg acgcgtgaaa gtcgcgattc agcagattcg ggaccgctgg
     7381 tgtcgggtcg ccagcatacg ccgagaagcg ccggcggcgc ggtgttctca cgaccagacg
     7441 ctcttgcgcc atcaagcgac gcacgacctt ctcggacaca cgcatgccac caaggcgcaa
     7501 ggcactatca atgcgtcgat agccatagca gcggtagttg tcctcgaaga tagtccgaat
     7561 gacctcacgc acctgcgtgt acttgtcggg ccgcgtctgc cgcaggcgtt gatagaagta
     7621 tgtgctgcgc gccagcttca ggccgcacaa cagattggct aatggaaacg tgactctgag
     7681 ggcatcaacc accttcgttt tttctcggct tgtcagttcg agggggttga tgcccatgtc
     7741 tttttttatc aattcactcg ccttctccag aattgcattc tccatgcgaa gccgctggtt
     7801 ctggctctcc agttcggcca gttccctgag tagtgcctca tgccgctgct cgagcgaggt
     7861 gtcacctttc ttctttgtca tgggttttag gggcactttg ccaagtaatc gatgctgcca
     7921 gttatacaac gttggtcgcg atacaccgac agtgtcggcc acatcctttg ccgaacctac
     7981 gcgcaggttc agtgcaatga cggcttgctg cttctcgagg cgagagcggg cgactgtggg
     8041 agcgctgctg ccgacgaccg tcctagcgaa ttcagggcgt aaatcacgga tccaggcacg
     8101 caaggcctcg cggcttgggt agcccaggct tcggattgtg tgactcaggc agtagccttg
     8161 ttcgatatag tgatctactg cccgttgctt ttgctcatcg gtgtactgcc gttttatccg
     8221 ttgatagcct cggcgaagat cctgattccg ttcgaattct gccaaccagg ccttcagcga
     8281 gttcttggtg gggtatccca gctgccgtag tgtggcgctc atccggcgcc caagcttcag
     8341 gtacaacctc acggctcgaa ggcgatcttc atacgaatac atgaactact cctaaagtag
     8401 tccaagattt tgtccgcacc ccaacttagg gtaaagattt gcgtcgaaat ttgacccacg
     8461 tatgacactg tttcccgtct ggatatggcg ggagaaatca aggagtgata aacgtggcga
     8521 tattgagcgc aattcgacgc tggcattttc gcgatggtgc gtcgattcgg gaaatagccc
     8581 gacgaagcgg cctgtccagg aacaccgttc gcaagtattt gcaaagcaag gtggttgaac
     8641 cgcagtaccc agcgcgagac agcgttggca agttaagtcc ttttgagccc aagttaaggc
     8701 agtggctctc caccgagcac aaaaagacaa agaagctgcg cagaaacctg cgcagcatgt
     8761 accgggattt ggtcgctttg ggctttaccg ggtcttatga ccgagtgtgt gcctttgccc
     8821 gacagtggaa agattccgaa cagttcaagg cgcaaacctc gggcaagggt tgtttcatcc
     8881 ccttgcgctt tgcttgtggc gaagccttcc aattcgattg gagtgaggac tttgcccgca
     8941 tagcgggcaa acaggtcaaa cttcagattg cccagtttaa gttggcccac agccgggcct
     9001 ttgtgcttcg ggcttactac cagcaaaaac atgaaatgct gtttgatgcc cactggcatg
     9061 cctttcaaat cttcggtggc attcccaagc gcggcatcta cgacaacatg aagaccgctg
     9121 tggattcggt ggggcgtggc aaagagcgca gggtcaatca gcggttcact gccatggtca
     9181 gccactacct gtttgatgcg cagttctgta atccagcatc gggttgggag aaaggccaga
     9241 ttgagaagaa cgtgcaggat tcccgccaac gcctgtggca aggggcacca gactttcaaa
     9301 gccttgctga tttgaatgtg tggcttgagc atcgctgcaa agcgctgtgg tctgagctgc
     9361 gccaccccga attggaccaa accgtgcaag aggcctttgc cgatgaacaa ggcgagttga
     9421 tggcgctacc caatgccttt gatgcattcg tggagcaaac caagcgagtc acttcaacct
     9481 gccttgttca ccacgagggc aatcgctaca gcgttcctgc cagttacgcc aacagggcca
     9541 tcagccttcg gatttatgca gacaagctgg tgatggctgc cgaaggccaa cacattgccg
     9601 agcatccaag attgtttggc agtggccacg ctcggcgtgg ccacacacaa tacgactggc
     9661 accattactt gtctgtgctt cagaagaaac ctggggcgtt gcgcaatggt gcgccatttg
     9721 ctgaattgcc acccgcgttc aagaagcttc aatccatctt gctgcaacgc cccggcggtg
     9781 accgtgacat ggtggaaatt ctggcccttg tattgcacca cgatgaaggt gcggtactca
     9841 gtgctgtgga attggcattg gagtgtggca agccatcgaa ggagcatgtg cttaatctgt
     9901 tgggacgttt gaccgaagaa cctccaccca aaccgattcc aattcccaag gggttaaggc
     9961 tgacattgga accacaggcc aacgtgaacc gctatgacag tttaaggaga gcccatgatg
    10021 cagcatgaag gccatgtgag aatcctcaaa tccttgaaac tctttggcat ggcacacgcc
    10081 attgaggagt tgggcaatca gaattcacca gcatttaatc aagccttgcc catgctggac
    10141 agcttgatta aagctgaagt ggcagagcgt gaagtacgtt cggtgaacta tcaattgcgg
    10201 gtggccaagt tccccgtgta tcgggactta gtgggctttg acttcagtca aagcctggtt
    10261 aatgaggcca cggtcaaaca attgcaccgg tgcgacttca tggaacaagc ccagaacgtg
    10321 gtgctgattg gtgggccagg cacaggcaag actcacctgg ccacagccat tggtacacaa
    10381 gcagtgatgc acttgaaccg acgggtgcgt ttcttctcca ccgtggattt ggtcaatgca
    10441 ctggagcaag agaaatcatc tgggcgtcag ggacaaatcg caaaccgtct gttgtatgcc
    10501 gatttggtga ttctggatga gctgggatat ttgcctttta gccaaaccgg tggggcactg
    10561 ctgtttcacc tgctctcaaa gctgtacgaa aaaaccagcg tgatactgac caccaacttg
    10621 agcttctcgg aatggagccg agtgtttggc gatgaaaaga tgacaacagc gttgttggac
    10681 cgactaaccc accactgcca catcctggaa accggcaatg aaagttaccg cttcaaacac
    10741 agttcaactc agaataagca ggaggaaaaa cagacccgca aactgaaaat cgagacataa
    10801 ttctgacaac aaggggtggg tcaaaattca atgcaaatcc cgggtcaaat ttgggtgcaa
    10861 atcaacagat atcgacaacc tctcgcgcaa ccaagacatc gcggtcggac tgcaagtgat
    10921 cttgaagcca cgggcccgtc ccaccccgac atggacctcg atgcccgaac ggacgttaga
    10981 tttcgagttc taggcgttct gcgatgaagg ttggatccca gccgggattg aaagtgtcga
    11041 cgtgggtgaa tccgagccgc tcgtataggc cacgcaggtt cgggtggcag tcgagccgca
    11101 gcttggcgca cccctgcgtt cgcgcggcat ggcggcaagc ctcgatcagc gcggagctga
    11161 caccccggcc cgcatgtgtc cgtcgcaccg cgagcttgtg cagatatgcg gcctccccct
    11221 tgagggcgtc gggccagaac tcgggatcct cggccgacaa ggtgcaacag ccgacgatgc
    11281 cgtcgctgca actcgcgact aggagctcgg atctcaggac gaaggtctcc gcgaatgtcc
    11341 ggtcgatccg cgcgacgtcc caggcgggcg ttcccttggc ggacatccac gccgcagcgt
    11401 cgtgcatcag ccgcacaacc tcgtcgatat cacccgagca ggcgacccga acgttcggag
    11461 gctcctcgct gtccattcgc tcccctggcg cggtatgaac cgccgcctca tagtgcagtt
    11521 tgatcctgac gagcccagca tgtctgcgcc caccttcgcg gaacctgacc agggtccgct
    11581 agcgggcggc cggaaggtga atgctaggca tgatctaacc ctcggtctct ggcgtcgcga
    11641 ctgcgaaatt tcgcgagggt ttccgagaag gtgattgcgc ttcgcagatc tccaggcgcg
    11701 tgggtgcgga cgtagtcagc gccattgccg atcgcgtgaa gttccgccgc aaggctcgct
    11761 ggacccagat cctttacagg aaggccaacg gtggcgccca agaaggattt ccgcgacacc
    11821 gagaccaata gcggaagccc caacgccgac ttcagctttt gaaggttcga cagcacgtgc
    11881 agcgatgttt ccggtgcggg gctcaagaaa aatcccatcc ccggatcgag gatgagccgg
    11941 tcggcagcga ccccgctccg tcgcaaggcg gaaacccgcg cctcgaagaa ccgcacaatc
    12001 tcgtcgagcg cgtcttcggg tcgaaggtga ccggtgcggg tggcgatgcc atcccgctgc
    12061 gctgagtgca taaccaccag cctgcagtcc gcctcagcaa tatcgggata gagcgcaggg
    12121 tcaggaaatc cttggatatc gttcaggtag cccacgccgc gcttgagcgc atagcgctgg
    12181 gtttccggtt ggaagctgtc gattgaaaca cggtgcatct gatcggacag ggcgtctaag
    12241 agcggcgcaa tacgtctgat ctcatcggcc ggcgatacag gcctcgcgtc cggatggctg
    12301 gcggccggtc cgacatccac gacgtctgat ccgactcgca gcatttcgat cgccgcggtg
    12361 acagcgccgg cggggtctag ccgccggctc tcatcgaaga aggagtcctc ggtgagattc
    12421 agaatgccga acaccgtcac catggcgtcg gcctccgcag cgacttccac gatggggatc
    12481 gggcgagcaa aaaggcagca attatgagcc ccatacctac aaagccccac gcatcaagct
    12541 tttgcccatg aagcaaccag gcaatggctg taattatgac gacgccgagt cccgaccaga
    12601 ctgcataagc aacaccgaca gggatggatt tcagaaccag agaaagaaaa taaaatgcga
    12661 tgccataacc gattatgaca acggcggaag gggcaagctt agtaaagccc tcgctagatt
    12721 ttaatgcgga tgttgcgatt acttcgccaa ctattgcgat aacaagaaaa agccagcctt
    12781 tcatgatata tctcccaatt tgtgtagggc ttattatgca cgcttaaaaa taataaaagc
    12841 agacttgacc tgatagtttg gctgtgagca attatgtgct tagtgcatct aacgcaaagc
    12901 taaggggcgg ctacaagcgg cgcgcaaaat gcgaagcatg cgccgattgg agacgtccag
    12961 tggcgcagcc acggccttga gcgccttgtt agccaccaat gatgatacct tcacttgcca
    13021 tgattttcgt tggaatggat tttcttgacg gcaacttact ctcattgtct atgtccatgt
    13081 taaatgcaaa aaagtaaacc tcagttcctt tttctaccca accaacccac caagcgacac
    13141 caggatttga ttctgtgccc acaccggaat acccggtttt tgaatgcact atatattctg
    13201 gagttgcttc tgtaactatt gcctctttta ctataagttg gtttgcttta gatgctggca
    13261 aattatttag gtaaagcgac tctaaaaatt taacttgatt gactgctgag attctaagct
    13321 gaccttctag ccaaaatttg tcaatgcctc cgcctatatt ggcgttgcca tatgaaaaaa
    13381 ggttaaggta tttttgcatt ctttttttgc caatgtctct ggcaatttgt tgaaataccg
    13441 gaacagcaga aacttgtata gcgcccctta gcgttaagtc tttttcccat tgcttcatgg
    13501 ctctgggctt gccgtcccat ttgaaaacct gccgcgcatc ttttatggcg ccggtttcaa
    13561 ggcctatgag agcattggga attttgaatg ttgatgctgg aatataggcc gtagatgcac
    13621 gtgttgcatt atttgttgta caggaattac tactgctttt acaaagtaca aaaacaccat
    13681 gcactgattc actggaaaat tctttattcc aagctaaatt ttcagaaata gactctgaaa
    13741 gtgcagtgcc tgcaaaaaat actagaacta aatatgcggc tatggttttc atggtacctt
    13801 ggtggctaac gttggacgta acgggcgccg aggcgcagcc gagggaaccc aaatgcgcag
    13861 catttgggtg tcccgttgac ggacttgtta gccgttacga cgcgcataga cggagtgcgt
    13921 gtacgtgatt gtgccttgaa tggtttcgga tgagacaacc tcgaattctg ctgcgttaag
    13981 cactgggaag aaggcgtcac cctcaaaggt ttgatgtacc tcagatagaa agacgccgtt
    14041 ggcatgcggt agcgccagcg catatacctc ggctccgccg gctacgtaga gttctttgcc
    14101 gtgttcggct gcgatggcga tagcctgtga cagcgttgaa acaactgcac aaccaggagc
    14161 gctataacga gcttggcgcg agagcaccac tgtgtggcgg tttggtaagg gcttgcctat
    14221 ggactcaaat gtcttgcggc ccataacgac cactttgctc tcggtgagcc tgcgaaaaat
    14281 cttctgctca cctgggattt tccaggggat atcgggacca ttgccaataa cccgattggc
    14341 acccatggca gcgaccagat aaatgcggac cgattccggg ttcatacggc taactttgtt
    14401 ttagggcgac tgccctgctg cgtaacatcg ttgctgctcc ataacatcaa acatcgaccc
    14461 acggcgtaac gcgcttgctg cttggatgcc cgaggcatag actgtacaaa aaaacagtca
    14521 taacaagcca tgaaaaccgc cactgcgccg ttaccaccgc tgcgttcggt caaggttctg
    14581 gaccagttgc gtgagcgcat acgctacttg cattacagtt tacgaaccga acaggcttat
    14641 gtcaactggg ttcgtgcctt catccgtttc cacggtgtgc gtcacccggc aaccttgggc
    14701 agcagcgaag tcgaggcatt tctgtcctgg ctggcgaacg agcgcaaggt ttcggtctcc
    14761 acgcatcgtc aggcattggc ggccttgctg ttcttctacg gcaaggtgct gtgcacggat
    14821 ctgccctggc ttcaggagat cggaagacct cggccgtcgc ggcgcttgcc ggtggtgctg
    14881 accccggatg aagtggttcg catcctcggt tttctggaag gcgagcatcg tttgttcgcc
    14941 cagcttctgt atggaacggg catgcggatc agtgagggtt tgcaactgcg ggtcaaggat
    15001 ctggatttcg atcacggcac gatcatcgtg cgggagggca agggctccaa ggatcgggcc
    15061 ttgatgttac ccgagagctt ggcacccagc ctgcgcgagc agctgtcgcg tgcacgggca
    15121 tggtggctga aggaccaggc cgagggccgc agcggcgttg cgcttcccga cgcccttgag
    15181 cggaagtatc cgcgcgccgg gcattcctgg ccgtggttct gggtttttgc gcagcacacg
    15241 cattcgaccg atccacggag cggtgtcgtg cgtcgccatc acatgtatga ccagaccttt
    15301 cagcgcgcct tcaaacgtgc cgtagaacaa gcaggcatca cgaagcccgc cacaccgcac
    15361 accctccgcc actcgttcgc gacggccttg ctccgcagcg gttacgacat tcgaaccgtg
    15421 caggatctgc tcggccattc cgacgtctct acgacgatga tttacacgca tgtgctgaaa
    15481 gttggcggtg ccggagtgcg ctcaccgctt gatgcgctgc cgcccctcac tagtgagagg
    15541 tagggcagcg caagtcaatc ctggcggatt cactacccct gcgcgaaggc catcggtgcc
    15601 gcatcgaacg gccggttgcg gaaagtcctc cctgcgtccg ctgatggccg gcagcagccc
    15661 gtcgttgcct gatggatcca acccctccgc tgctatagtg cagtcggctt ctgacgttca
    15721 gtgcagccgt cttctgaaaa cgacaatgga ggtggtagcc gagggtgtgg aaacacccga
    15781 ctgccttgcg tggttgcggc aggcgggttg cgacacggtg cagggtttcc tgttcgccag
    15841 gccgatgccg gcggcggcct tcgtcggctt cgtcaaccaa tggaggaaca ccaccatgaa
    15901 cgccaatgaa ccgagcacca gttgctgcgt gtgctgcaag gaaatcccgc tcgatgccgc
    15961 cttcacgccg gaaggggccg agtacgtgga gcatttctgc gggctggagt gctatcagcg
    16021 cttccaggcg cgggccagca ctgcgaccga aaccagcgtc aaaccggacg cttgtgattc
    16081 gccgccgtca ggttgaggca taccctaacc tgatgtcaga tgccatgtgt aaattgcgtc
    16141 aggataggat tgaattttga atttattgac atatctcgtt gaaggtcata gagtcttccc
    16201 tgacattttg cagggaattc catgactgga cagcgcattg ggtatatcag ggtcagcacc
    16261 ttcgaccaga acccggaacg gcaactggaa ggcgtcaagg ttgatcgcgc ttttagcgac
    16321 aaggcatccg gcaaggatgt caagcgtccg caactggaag cgctgataag cttcgcccgc
    16381 accggcgacg gcactgttgc aaatagtcgg tggtgataaa cttatcatcc ccttttgctg
    16441 atggagctgc acatgaaccc attcaaaggc cggcattttc agcgtgacat cattctgtgg
    16501 gccgtacgct ggtactgcaa atacggcatc agttaccgtg agctgcagga gatgctggct
    16561 gaacgcggag tgaatgtcga tcactccacg atttaccgct gggttcagcg ttatgcgcct
    16621 gaaatggaaa aacggctgcg ctggtactgg cgtaaccctt ccgatctttg cccgtggcac
    16681 atggatgaaa cctacgtgaa ggtcaatggc cgctgggcgt atctgtaccg ggccgtcgac
    16741 agccggggcc gcactgtcga tttttatctc tcctcccgtc gtaacagcaa agctgcatac
    16801 cggtttctgg gtaaaatcct caacaacgtg aagaagtggc agatcccgcg attcatcaac
    16861 acggataaag cgcccgccta tggtcgcgcg cttgctctgc tcaaacgcga aggccggtgc
    16921 ccgtctgacg ttgaacaccg acagattaag taccggaaca acgtgattga atgcgatcat
    16981 ggcaaactga aacggataat cggcgccacg ctgggattta aatccatgaa gacggcttac
    17041 gccgccatca aaggtattga ggtgatgcgt gcactacgca aaggccaggc ctcagcattt
    17101 tattatggtg atcccctggg cgaaatgcgc ctggtaagca gagtttttga aatgtaaggc
    17161 ctttgaataa gacaaaaggc tgcctcatcg ctaactttgc aacagtgccc cggcgacacc
    17221 gtggtggtgc atagcatgga tcgcctggcg cgcaatctcg atgatttgcg ccggatcgtg
    17281 caaacgctga cacaacgcgg cgtgcatatc gaattcgtca aggaacacct cagttttact
    17341 ggcgaagact ctccgatggc gaacctgatg ctctcggtga tgggcgcgtt cgccgagttc
    17401 gagcgcgccc tgatccgcga gcgtcagcgc gagggtattg cgctcgccaa gcaacgcggg
    17461 gcttaccgtg gcaggaagaa atccctgtcg tctgagcgta ttgccgaact gcgccaacgt
    17521 gtcgaggctg gcgagcaaaa gaccaagctt gctcgtgaat tcggaatcag tcgcgaaacc
    17581 ctgtatcaat acttgagaac ggatcagtaa atatgccacg tcgttccatc ctgtccgccg
    17641 ccgagcggga aagcctgctg gcgttgccgg actccaagga cgacctgatc cgacattaca
    17701 cattcaacga taccgacctc tcgatcatcc gacagcggcg cgggccagcc aatcggctgg
    17761 gcttcgcggt gcagctctgt tacctgcgct ttcccggcgt catcctgggc gtcgatgaac
    17821 taccgttccc gcccttgttg aagctggtcg ccgaccagct caaggtcggc gtcgaaagct
    17881 ggaacgagta cggccagcgg gagcagaccc ggcgcgagca cctgagcgag ctgcaaaccg
    17941 tgttcggttt ccggcccttc accatgagcc attaccggca ggccgtccag atgctgaccg
    18001 agctggcgat gcaaaccgac aaaggcatcg tgctggccag cgccttgatc gggcacctgc
    18061 ggcggcagtc ggtcattctg cccgccctca acgccgtcga gcgggcgagt gccgaggcga
    18121 tcacccgtgc taaccggcgc atctacgacg ccttggccga accactggcg gacgcgcatc
    18181 gccgccgcct cgacgatctg ctcaagcgcc gggacaacgg caagacgacc tggttggctt
    18241 ggttgcgcca gtctccggcc aagccaaatt cgcggcatat gctggaacac atcgaacgcc
    18301 tcaaggcatg gcaggcactc gatctgccta ccggcatcga gcggctggtt caccagaacc
    18361 gcctgctcaa gattgcccgc gagggcggcc agatgacacc cgccgacctg gccaaattcg
    18421 agccgcaacg gcgctacgcc actctcgtgg cgctggccac cgagggcatg gccaccgtca
    18481 ccgacgaaat catcgacctg cacgaccgca tcctgggtaa gctgtttaac gctgccaaga
    18541 ataagcatca gcagcagttc caggcgtcag gcaaggccat caacgccaag gtacgtctgt
    18601 acgggcgcat cggtcaggcg ctgatcgacg ccaagcaatc aggccgcgat gcgtttgccg
    18661 ccatcgaggc catcatgtcc tgggattcct ttgccgagag cgtcaccgag gcgcagaagc
    18721 tcgcgcaacc cgatgacttc gatttcctgc atcgcatcgg cgagagctac gccaccctgc
    18781 gccgctatgc accggaattc cttgccgtgc tcaagctgcg ggccgcgccc gccgccaaaa
    18841 acgtgcttga tgccattgag gtgctgcgcg gcatgaacac cgacaacgcc cgcaagctgc
    18901 cagccgatgc accgaccggc ttcatcaagc cgcgctggca gaaactggtg atgaccgacg
    18961 ccggcatcga ccggcgctac tacgaactgt gcgcgctgtc cgagttgaag aactccctgc
    19021 gctcgggcga catctgggtg cagggttcac gccagttcaa ggacttcgag gactacctgg
    19081 taccgcccga gaagttcacc agcctcaagc agtccagcga attgccgctg gccgtggcca
    19141 ccgactgcga acaatatctg catgagcggc tgacgctgct ggaagcacaa cttgccaccg
    19201 tcaaccgcat ggcggcagcc aacgacctgc cggatgccat catcaccgag tcgggcttga
    19261 agatcacgcc gctggatgcg gcggtgcccg acaccgcgca ggcgctgata gaccagacag
    19321 ccatggtcct gccgcacgtc aagatcaccg aactgctgct cgaagtcgat gagtggacgg
    19381 gcttcacccg gcacttcacg cacttgaaat cgggcgatct ggccaaggac aagaacctgt
    19441 tgttgaccac gatcctggcc gacgcgatca acctgggcct gaccaagatg gccgagtcct
    19501 gccccggcac gacctacgcg aagctcgctt ggctgcaagc ctggcatacc cgcgacgaaa
    19561 cgtactcgac agcgttggct gaactggtca acgctcagtt tcggcatccc tttgccgggc
    19621 actggggcga tggcaccaca tcatcatcgg acggacagaa tttccgaacc gctagcaagg
    19681 caaagagcac ggggcacatc aacccaaaat atggcagcag cccaggacgg actttctaca
    19741 cccacatctc cgaccaatac gcgccattcc acaccaaggt ggtcaatgtc ggcctgcgcg
    19801 actcaaccta cgtgctcgac ggcctgctgt accacgaatc cgacctgcgg atcgaggagc
    19861 actacaccga cacggcgggc ttcaccgatc acgtcttcgc cctgatgcac ctcttgggct
    19921 tccgcttcgc gccgcgcatc cgcgacctgg gcgacaccaa gctctacatc ccgaagggcg
    19981 atgccgccta tgacgcgctc aagccgatga tcggcggcac gctcaacatc aagcacgtcc
    20041 gcgcccattg ggacgaaatc ctgcggctgg ccacctcgat caagcagggc acggtgacgg
    20101 cctcgctgat gctcaggaaa ctcggcagct acccgcgcca gaacggcttg gccgtcgcgc
    20161 tgcgcgagtt gggccgcatc gagcgcacgc tgttcatcct cgactggctg caaagcgtcg
    20221 agctacgccg ccgcgtgcat gccgggctga acaagggcga ggcgcgcaat gcgctggccc
    20281 gtgccgtgtt cttcaaccgc cttggtgaaa tccgtgaccg cagtttcgag cagcagcgct
    20341 accgggccag cggcctcaac ctggtgacgg cggccatcgt gctgtggaac acggtctacc
    20401 tggagcgtgc ggcgcatgcg ttgcgcggca atggtcatgc cgtcgatgac tcgctattgc
    20461 agtacctgtc gccactcggc tgggagcaca tcaacctgac cggtgattac ctatggcgca
    20521 gcagcgccaa gatcggcgcg gggaagttca ggccgctacg gcctctgcaa ccggcttagc
    20581 gtgctttatt ttccgttttc tgagacgacc cctattatgg cgaaggtatc attcaggaag
    20641 cgttgatgaa ggattatctc tgtaaaaagt tattcaaccg gctttccggt accctggtga
    20701 tcagagcgcg ctgcggcaat aacattactg gcctggcatg ttgcaatatt ctttatccct
    20761 cgccccgata cagcggtcag ctgcatatta aagagctgta tgtttctcag tgcgatcgaa
    20821 ataagggcac gggtaaagcg ataatgcgct ttatagcccg gcttgcgctt gaacaggaat
    20881 gccttagcct tagctggaac gctgaaaaat ccaaccccgg cgctaaccgt ttttatcagg
    20941 ctctgggagg cagaataaat gatcatatcg tcaattatta cctccacggg gagagcctga
    21001 gcaaactggc ctcaggcatt tgagaagcac acggtcacac tgcttccggt agtcaataaa
    21061 ccggtaaacc agcaatagac ataagcggct atttaacgac cctgccctga accgacgacc
    21121 gggtcgaatt tgctttcgaa tttctgccat tcatccgctt attatcactt attcaggcgt
    21181 agcaaccagg cgtttaaggg caccaataac tgccttaaaa aaattacgcc ccgccctgcc
    21241 actcatcgca gtactgttgt aattcattaa gcattctgcc gacatggaag ccatcacaaa
    21301 cggcatgatg aacctgaatc gccagcggca tcagcacctt gtcgccttgc gtataatatt
    21361 tgcccatggt gaaaacgggg gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac
    21421 tggtgaaact cacccaggga ttggctgaga cgaaaaacat attctcaata aaccctttag
    21481 ggaaataggc caggttttca ccgtaacacg ccacatcttg cgaatatatg tgtagaaact
    21541 gccggaaatc gtcgtggtat tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga
    21601 aaacggtgta acaagggtga acactatccc atatcaccag ctcaccgtct ttcattgcca
    21661 tacggaattc cggatgagca ttcatcaggc gggcaagaat gtgaataaag gccggataaa
    21721 acttgtgctt atttttcttt acggtcttta aaaaggccgt aatatccagc tgaacggtct
    21781 ggttataggt acattgagca actgactgaa atgcctcaaa atgttcttta cgatgccatt
    21841 gggatatatc aacggtggta tatccagtga tttttttctc cattttagct tccttagctc
    21901 ctgaaaatct cgataactca aaaaatacgc ctggtagtga tcttatttca ttatggtgaa
    21961 agttggaacc tcttacgtgc cgatcaacgt ctcattttcg ccaaaagttg gcccagggct
    22021 tcccggtatc aacagggaca ccaggattta tttattctgc gaagtgatct tccgtcacag
    22081 gtatttattc ggcgcaaagt gcgtc
//
LOCUS       DADKRT010000060        21468 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.061, whole genome shotgun sequence.
ACCESSION   DADKRT010000060 DADKRT010000000
VERSION     DADKRT010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 21468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21468
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.061"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            353..1711
                     /locus_tag="JQ356_001887"
     CDS             353..1711
                     /locus_tag="JQ356_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000823236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HAY4621997.1"
                     /translation="MKRKIIPVLIGCTLSFSALAAQPTAERYVVSFPEGTHVNYAGAF
                     ASAFPNGLPVGIGSGLLFTGKQGDALTFATITDRGPNADSPKEGKNETKIFVTPDFAP
                     LLMTIRVQNGKAEAIDPRPLHDDKGAINGLPLASDVIGSTNEVAFSDTLHRLKGDNRG
                     LDTEGITPDGKGGYWLCDEYGPFLINIDSKGKILAIHGPQAAEGEKAIAGGLPNILKW
                     RQANRGFEGLTRMPDGRIIVAVQSTLDIDAKSKKKALFTRLVSFDPASGKTAMYGYPI
                     DSAAYSKNSDAKIGDIVALDNQHILLIEQGRDKNNRMRNLIYEVDLNKASDLSGFDKP
                     GEYPEFDDEKTLSQRGITLAQKTQVVDLRSLGWQQEKAEGLALIDSKTLAVANDNDFG
                     VKVAMQHPVEGKTFKDYRVNAEGKLTLDDKQVETTLRVKPLEKPESDSELWIVTLPEA
                     LK"
     gene            complement(1950..3335)
                     /locus_tag="JQ356_001888"
     CDS             complement(1950..3335)
                     /locus_tag="JQ356_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY4621998.1"
                     /translation="MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQL
                     DKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPF
                     PESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
                     DTIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYCQSEIYGRQGVELSRSLLSG
                     WVDACCRLLSPLEEALHGYVMTDGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNA
                     GSALAPAVWFAYSPDRKSIHPQTHLACFSGVLQADAYAGFNELYRNGGITEAACWAHA
                     RRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLES
                     WLREKMKTLFFGSGHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSE
                     LLPWRIALPAE"
     gene            complement(3385..3732)
                     /gene="tnpB"
                     /locus_tag="JQ356_001889"
     CDS             complement(3385..3732)
                     /gene="tnpB"
                     /locus_tag="JQ356_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019104956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY4621999.1"
                     /translation="MIPLPSGTKIWLVAGITDMRNSFNGLAAKVQTALKDDPMSGHIF
                     IFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDW
                     RQPKRLLTSLTML"
     gene            complement(3729..4109)
                     /locus_tag="JQ356_001890"
     CDS             complement(3729..4109)
                     /locus_tag="JQ356_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000603938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HAY4622000.1"
                     /translation="MQKNVTPGRRKGCPNYPPEFKQLLVAASCEPGISISKLALENGI
                     NANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFR
                     HGTLRFNGNVSEKLLTLLIQELKR"
     gene            complement(4464..4898)
                     /locus_tag="JQ356_001891"
     CDS             complement(4464..4898)
                     /locus_tag="JQ356_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622001.1"
                     /translation="MRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQR
                     GNDGQPPWFEHDQMTVAEKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVM
                     CDEDYEGEKCCPRCGTGVYSRAWGRQEVPSEDARADNPLQRL"
     gene            complement(4886..5287)
                     /locus_tag="JQ356_001892"
     CDS             complement(4886..5287)
                     /locus_tag="JQ356_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004020115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622002.1"
                     /translation="MYAKSFIALDGNGRLTGARTAQAAPYANYTCHLCGSALRYHPQY
                     ETELPWFEHTDDRLTEHGQQCPYVRPERREIQLIKRLQQFVPDALPVVRKASWHCRQC
                     HHDYYGEQYCTHCQTGGFSIPRTTQEEICEF"
     gene            complement(5547..6116)
                     /locus_tag="JQ356_001893"
     CDS             complement(5547..6116)
                     /locus_tag="JQ356_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000221568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus Gp2 family protein"
                     /protein_id="HAY4622003.1"
                     /translation="MTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRLPDVPAATD
                     AAVISRFINALKARIDAYQKRKHREGKRVHPTTLHYVWAREFGECKGKKHYHLMLLVN
                     RDTWCRAGDYRAPESLAGMIKQAWCSALGVDVGCHATLVHFPAWPAVWLARNDDTGFQ
                     QVLERADYLAKEHTKAHCTGERNFGCSRS"
     gene            complement(6861..7037)
                     /locus_tag="JQ356_001894"
     CDS             complement(6861..7037)
                     /locus_tag="JQ356_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin activation protein"
                     /protein_id="HAY4622004.1"
                     /translation="MAARNTSGDAGKVNSHTRYKLTLAELEAFNSAVDNRLAELTMNK
                     LYDRAPASVWKYVT"
     gene            complement(7338..7604)
                     /locus_tag="JQ356_001895"
     CDS             complement(7338..7604)
                     /locus_tag="JQ356_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000840368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622005.1"
                     /translation="MAEPYRYTGWLLRKDASARTRDKEGIVFVRTGREAGVLIIAELF
                     SEVVTVSQPVPGEEETDITDGIRLSDWYYKYKKSSESNVKDLPE"
     gene            7673..7951
                     /locus_tag="JQ356_001896"
     CDS             7673..7951
                     /locus_tag="JQ356_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001380890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HAY4622006.1"
                     /translation="MPVKVARCFHDHTGWFNNIRRNILMATPVSLMDDQMVDMAFITQ
                     LTGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQPRP"
     gene            8046..8648
                     /locus_tag="JQ356_001897"
     CDS             8046..8648
                     /locus_tag="JQ356_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001760115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622007.1"
                     /translation="MKQQYQTRYEWLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLT
                     PGWVSFNGEKPEIAIVPQSLHRLIYGPDKRATPPLDDDLIVNLCTSEHLLVHHPMLEG
                     ILLSECERLRQRSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNSLEDWKENLKRK
                     SEKELEEWIINRQRQSAALTDLMDQYVLLAYRTTVDDSRN"
     gene            9848..10765
                     /locus_tag="JQ356_001898"
     CDS             9848..10765
                     /locus_tag="JQ356_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622008.1"
                     /translation="MVQKILSDKVMNERTNAYYSYYLGERNISVLPLNVYDPPERFIA
                     YIKKNRENLNITLSDFELEQIISGMRLKALAFLVPLEKISWIAGSERACLFSWYLLMQ
                     FIQNNRAKISADLLQKNKLYLKEEYLEGNAFPSDSSTQFRQILRVLDILSDKNLRDEW
                     IIQTKDRWMRAFKSKSPFSYLLPENEHECIWTWNYLKGKNIALEKLASFPGSADIYHA
                     IHLSFDIWVTCPLTSPDDIKNFRNSFNKAKAQRKYKKMQEDKVNVQFFLDAETRAQLK
                     ELSRVRRLSTGEMLHDLIVEEYKRYRHSR"
     gene            10850..11722
                     /locus_tag="JQ356_001899"
     CDS             10850..11722
                     /locus_tag="JQ356_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase family protein"
                     /protein_id="HAY4622009.1"
                     /translation="MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGK
                     SGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLSGHGHSMVITDLPGVGESRDRDA
                     EYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
                     HEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALP
                     DHAASPLMTRLQDELRTESVRGQAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDT
                     VVSVARAVWNWIFF"
     gene            12094..14940
                     /gene="ag43"
                     /locus_tag="JQ356_001900"
     CDS             12094..14940
                     /gene="ag43"
                     /locus_tag="JQ356_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Ag43"
                     /protein_id="HAY4622010.1"
                     /translation="MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVVLSLAA
                     VTSVPALAADTIVQAGETVNGGTLTNHDNQIVLGTANGMTISSGLEYGPDNEANTGGQ
                     WIQNGGIANNTTVTGGGLQRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE
                     GGIATGTVINEKGWQTVKSGAMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINE
                     NGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQ
                     IIKEGGLADFTTVNQKGKLQVNAGGTATHVTLKQGGALVTSTAATVLGSNRLGNFTVE
                     NGKADGVVLESGGRLDVLEGHSAQKTRVDDGGTLAVSAGGKATGVTMTSGGALIADSG
                     ATVEGTNASGKFSIDGTSGQASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGS
                     LSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTTPDAALSRAVAKGDSPVTFHK
                     LTTSNLTGQGGTINMRVRLDGSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQ
                     GIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTS
                     MLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSY
                     GFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL
                     THTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQL
                     HYTWQGLTLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMSFGEGTSSRDTLRDSTK
                     HRVSELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLDLQAGLEARV
                     RENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF"
     gene            15011..15169
                     /locus_tag="JQ356_001901"
     CDS             15011..15169
                     /locus_tag="JQ356_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 domain-containing protein"
                     /protein_id="HAY4622011.1"
                     /translation="MPGCTSRLLPEGPFSREQAVAVKTAYRNVFTEDDQGTYSRLVIR
                     NAEGQLRW"
     gene            15324..16142
                     /locus_tag="JQ356_001902"
     CDS             15324..16142
                     /locus_tag="JQ356_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HAY4622012.1"
                     /translation="MRLASRFGYANQIRRDRPLTHEELMHYVPSIFGEDRHTSRSKRY
                     AYIPTITVLESLQQEGFQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIIL
                     LNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD
                     RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWS
                     AYQTIQENMLKGGISGRSAKGKRIHTRAIHNIDTDIKLNRALWVMAETLLESLR"
     gene            16484..16957
                     /locus_tag="JQ356_001903"
     CDS             16484..16957
                     /locus_tag="JQ356_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HAY4622013.1"
                     /translation="MKTLSQNTTASACAPETGLQQLVATPVPDEQRISFWPQHFGLIP
                     QWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGN
                     RAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID"
     gene            16973..17449
                     /locus_tag="JQ356_001904"
     CDS             16973..17449
                     /locus_tag="JQ356_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HAY4622014.1"
                     /translation="MQQLSFLPGNMTPGERSLILRALQTLDRHLHEPGVAFTSTRAAR
                     EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA
                     VVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL"
     gene            17512..17733
                     /locus_tag="JQ356_001905"
     CDS             17512..17733
                     /locus_tag="JQ356_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF987 domain-containing protein"
                     /protein_id="HAY4622015.1"
                     /translation="MRIITRGEAMRIHQQHPASRLFPFCTGKYRWHGSAEAYTGREVQ
                     DIPGVLAVFAERRKDSFGPYVRLMSVTLN"
     gene            17896..18270
                     /locus_tag="JQ356_001906"
     CDS             17896..18270
                     /locus_tag="JQ356_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system YeeU family
                     antitoxin"
                     /protein_id="HAY4622016.1"
                     /translation="MSDKLSGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLYYL
                     ADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSGELNPRYQHTVTLYAKGLTCEAD
                     TLGSCGYVYLAVYPTPAPATTS"
     gene            18317..18691
                     /locus_tag="JQ356_001907"
     CDS             18317..18691
                     /locus_tag="JQ356_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HAY4622017.1"
                     /translation="MKTLSDTHVREVSRCPSPVTIWQTLLIRLLDQHYGLTLNDTPFV
                     DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSTCPRSQLINSIDILRARRATG
                     LMTRDNYRTVNNITLGKYPEAK"
     gene            18688..19179
                     /locus_tag="JQ356_001908"
     CDS             18688..19179
                     /locus_tag="JQ356_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622018.1"
                     /translation="MMKLALTLEADSVNVQALNIGRIVVDVDGIELAELINMVCDNGY
                     SLRVVDESDQTSAECTPPFATLTGIRCSTAHITETDNAWLYSLSHQTSDFGESEWIHF
                     TGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIRRYGVSLIHLDASAECLPGLPT
                     FDW"
     gene            19191..19388
                     /locus_tag="JQ356_001909"
     CDS             19191..19388
                     /locus_tag="JQ356_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF957 domain-containing protein"
                     /protein_id="HAY4622019.1"
                     /translation="MKSLTTETALDILIAWLQDNIDCGSGIIFDNDEDKTDSAALLPC
                     IEQAREDVRTLRHLQLLHQNR"
     gene            19473..20036
                     /locus_tag="JQ356_001910"
     CDS             19473..20036
                     /locus_tag="JQ356_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
                     /protein_id="HAY4622020.1"
                     /translation="MSDITISRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQ
                     LAEISVLTESIGGKTAPDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRS
                     GMLSLMDTQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLN
                     WNYKTNCPCKFGSKIIVNNLVRWDRWG"
     gene            20105..21109
                     /locus_tag="JQ356_001911"
     CDS             20105..21109
                     /locus_tag="JQ356_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001179707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISSfl8 family transposase"
                     /protein_id="HAY4622021.1"
                     /translation="MQNITLIGIDLGKHSFHIHCQDKSGKALLRKKFTRTKLMQFLAT
                     CPPSVVVMEACAGAHFMARCISDFGHETKLISPQFVRPFVKSNKNDFVDAEAICEAAS
                     RPSMRFVQPRTETQQAMRALHRVRESLIRDKVKTTNQIHGFLLEFGISLPIGDAVIKR
                     LSLVLAEHEIPEYLSRLLVRLHTHYFYLVEQIAELESELSQSINADDTAQRIMTIPGV
                     GPITASLLSSQLGDGKQFSCSRDFAASTGLVPRQYSTGGKSTLLGISKRGDKNLRRLL
                     VQCARSFIMRLERKHGKLAEWVREQLNKKHSNVVTCALANKLARIAWAITTQKKEYQA
                     "
BASE COUNT         5166 a         5673 c         5589 g         5040 t
ORIGIN      
        1 gggatatggc cctgcctttc cagcaatcgt cgattgttat accagtccac ccacgtgagt
       61 gtggtcagct catcatactg acacgtgcat tacccctacc gcgataatgc aaccgtacaa
      121 tatagggcgt ttcctaaacg cagccctcat cactccaatc caacaagaca cagcattttt
      181 gatcacgaag aaagacaaat aatttccgta aatgtttccg ttgttacaaa taacaacagt
      241 gttttacatt tctttggcct caggcccgcg catgttgcca ttcgatgtca ttttcctgac
      301 tcgtttcttc tttatggtgt agtgtgatct tcactttata gatgctaaca atatgaaaag
      361 aaaaattatt cccgtgctaa tcggttgtac gctctctttc tctgccctgg cggcacaacc
      421 tacggctgag cgctatgtcg tcagttttcc agaaggcacg cacgtgaact acgccggcgc
      481 atttgccagt gcattcccga acggccttcc ggttgggata ggttctggcc tgctgttcac
      541 cggtaaacag ggcgatgccc tgacattcgc aaccattacc gatcgcggtc cgaacgcgga
      601 ttcaccgaaa gaggggaaaa acgaaactaa aattttcgtt acgccagatt tcgcgccgct
      661 gctgatgacg attcgtgtac aaaacggcaa agcggaggcc atcgatcccc gtcctctgca
      721 tgacgataaa ggcgcgatca acggtctgcc gctggcaagc gacgtgattg gctccaccaa
      781 tgaagtggcc ttcagcgaca cgttacatag actgaagggg gataatcgcg ggctggatac
      841 ggaagggatc actccggatg gtaaaggagg ttactggctg tgcgatgagt atggcccgtt
      901 cctgattaac atcgacagta aagggaaaat cctggcaatc cacggtccgc aggcggcgga
      961 aggggaaaaa gcgattgcgg gcggtttgcc aaatatcctc aaatggcgtc aggcgaaccg
     1021 cggctttgaa ggcctcaccc gtatgccgga cgggcgtatt attgtcgccg tgcaaagtac
     1081 gctggatatc gacgctaaga gcaagaaaaa ggcgctgttt acgcgtctgg tgagcttcga
     1141 tccggcaagc ggaaaaaccg cgatgtacgg ttatcctatc gacagcgcgg cctacagcaa
     1201 aaacagcgac gctaaaatcg gagacatcgt ggcgctcgat aaccagcaca tcctgctgat
     1261 cgaacaggga agagataaaa acaacagaat gcgtaacctg atttacgagg tcgatctcaa
     1321 taaggcgagc gacctgtcag gcttcgacaa gccgggtgag tatccggagt ttgatgatga
     1381 gaaaaccctg tcacagcgcg gcattaccct tgcgcagaaa acgcaggttg ttgatctgcg
     1441 ctccttgggc tggcagcagg agaaggctga agggttggcg ctgatcgaca gcaaaacgct
     1501 ggcggtggcg aacgataacg actttggcgt gaaggtggcg atgcaacatc cggtcgaggg
     1561 caagacattc aaggattatc gggtgaacgc ggaaggaaag ctgacgcttg acgacaagca
     1621 ggttgaaacg accctcagag tgaagccact ggagaaaccg gagtctgaca gtgaactgtg
     1681 gattgtgacg ctgccggaag cgttgaaata agtttataag gtacggacag cagtatcgct
     1741 tagtttttca aattcatgta tgtgaacaat attggggttc cggcgtagac ccccaatgaa
     1801 agcgtcacca cgtgaaaaca tgcctgcacg gtttacacgt catcccatgg tggcagccgg
     1861 ttaactttcc tgcgccacca gtggaaaaag gccataagca gtccgaacaa aagtaagcgt
     1921 acagcgaggg ccgtattgac ggggatgtgt tattcagctg gcagtgctat gcgccacgga
     1981 agcagttcgc tgacccggtt gaccggccag tctgctatga cgccaagcac atggcgaagg
     2041 tagctttctg gatccacgtc attcagtttg cacgtcccga tcaggctgta cagtagcgct
     2101 ccccgctcac caccatggcc agagccgaag aacagggtct tcatcttttc acgcaaccag
     2161 ctttccaggg atttcaacag cggtttcgtt tttcgctgac gttcagcaag ccgctgctct
     2221 gccggcattc cccttatatc cgcctctatg gcgtacaact gaccgatctg ctccagggct
     2281 tcttccgtca gtgctgacgg gatgcggacg tgcacatcgt ggatctttcg gcgggcatga
     2341 gcccagcagg cagcttccgt tatcccacca ttgcgataca gctcgttgaa cccggcgtac
     2401 gcatccgctt gcagcacacc gctgaagcaa gcaagatgag tctgcggatg gatgcttttt
     2461 ctgtccgggc tgtaagcgaa ccacactgca ggtgccaacg ctgacccggc attgcggtca
     2521 tcacgaacat acgcccacaa ccgcccggtc ttcgtcttct tattacccgg cagcagtacc
     2581 tggaccgggg tatcatcggc atggagtttg ccgtcagtca tgacatagcc atgaagcgcc
     2641 tcttccagcg gagacagcag ccggcagcat gcatccaccc agcccgacag cagtgaacgg
     2701 ctcagctcca caccttgccg gccgtatatt tctgactggc aatacagcgg ggtgtgctct
     2761 gcatacttcg aggtcagcac gcgggccagc agccccggtc cggcgatacc ccgctcgatg
     2821 ggccgcgaag gtgcaggtgc ctgcacgatg gtatcgcact gagtacaggc atgtttttcc
     2881 cgtaccgtcc ggataacccg gaaggcgcta cgcatcaact ccagctgttc ggcggtatcc
     2941 tcgcccagat agctcagtga accgccgcag ttcgggcagc acggcgccgc aggcaacagt
     3001 cgcttttcgt cacggggtag tgattcaggg aacggcttac gggtgcgggt ctgacgcaac
     3061 ggacgctgta ctgccgggtc atacacccta ccagtcagcg tatcgctctc tttctgaagc
     3121 cggttcagat cggcttccat ttgtgcgata cggcgggaga ctttttcgga acgactgccg
     3181 aagttcatcc ggcggagttt atccagctgc gcctgcagat ggtctatttc gcgctcccgg
     3241 ttgctcagct tttcctgcag ggcgtggatc agcgcttcct gttcggccag gcgctgtttc
     3301 agcaggaaga tgtcgtcaga agagatgtcg ttcataagcc cgtattttac cgggcttatt
     3361 ctgtgacaac caggataaag agatttacag catggtcagg gaggtcagca gccgcttggg
     3421 ctgtcgccag tcgatacctt ccagcagcat cgccagctgc gcctgcgtaa ggaacacttt
     3481 gccatcacgg gctgacggcc aggcgaagcg cccacgctcc agccgtttgg tcaggaggca
     3541 cagtccgtcg ccggtggacc acagcagttt aacctgactg ccgctgcggc cccggaaaat
     3601 gaaaatatgg ccggacatgg gatcgtcttt cagcgccgtt tgtactttcg cagccaggcc
     3661 gttgaagcta tttctcatat cggtgatacc ggcaaccagc caaattttgg tcccggaagg
     3721 taacgggatc atcgcttcag ttcctgtatc agcagagtca ggagcttttc gctgacattg
     3781 ccattgaagc ggagcgtccc gtgccggaac gttacctcac agctgatact gagggtttcc
     3841 gggtcctctg cgagcgattc tggctgttcg gcagctgcat cgagagtcac aggaagtagc
     3901 tgggggctct ctgaagaagg taatagcagc tttccctcgc gccattgttg tcgccatttg
     3961 aacaacagat tggcgttaat gccattttca agagcaagtt ttgagatgga tatcccgggt
     4021 tcacaggagg cagcaacgag cagctgttta aattcgggag gataattagg gcagcctttt
     4081 cgcctgccgg gagtcacatt tttctgcata tctgacactt tggttcccac tacttatttg
     4141 gtggacacca ctttgtctaa ttcgtcagat tctgaccaga cggttcaggc tgtacgctta
     4201 ccactatttt atccctgttg aatttggtta agccggtgca gacgcgccgg gaaacgcaca
     4261 cctgaaccgg cacaataaaa tacaatacaa ccccctgtta ctggagatac gaatggaatg
     4321 acgaggcagc ctgtcagtca cagggggctg ttggcataaa atcaacggaa aggccaccaa
     4381 caccggaatt aagctccaca gtccccgcac tggcaatcca ttcccgggaa aggcatcacc
     4441 gcaaactgct ccggaggcaa ccattacagc ctctgtaacg gattatcagc cctggcatct
     4501 tccgacggca cctcctgccg cccccacgcc ctgctgtata ccccggtacc gcagcgtggg
     4561 cagcactttt ccccctcata atcttcgtca cacatcacac aaaaccactt tctcaccttc
     4621 accgtataat ccggaaccgt catgccctgc agatgcaaac gacgggcctc tttctctgcc
     4681 gggtcaagcc aggtacatcg cagcaggatt ttttcagcga cagtcatctg gtcatgttca
     4741 aaccacggtg gttgtccgtc attgccccgc tgaagtgtta acgggcatcc acaggacaca
     4801 cagcacaaaa cgtcctgtcg gttgtgcttc gcagcttctt tcgccgtaac aaaatggcct
     4861 ttgctgtcat tcgccatata acagttcaga attcgcatat ttcctcctga gttgtccggg
     4921 gaatactgaa tcctccggtc tggcagtgtg tgcagtactg ctccccataa taatcgtggt
     4981 gacattgtct gcagtgccag ctggctttac gcaccacggg taaggcatcc ggtacgaatt
     5041 gctgcagacg tttaatcaac tgtatttctc tgcgctccgg cctgacataa gggcactgtt
     5101 gaccgtgctc tgtcagcctg tcgtcagtgt gttcaaacca gggaagttca gtttcgtatt
     5161 gcggatggta tctgagtgca ctgccacaca agtggcaggt gtagttagca taaggtgcgg
     5221 cctgtgcagt acgggcgccc gtcagacgtc cgttgccatc aagagcgata aaggattttg
     5281 cgtacatagt catatacctc agccgccaga cgacacgcag gcaacagccg tcccggtacg
     5341 ggcagcgtgg tcagggtgtg aatggcggtt cagttaaaat ctggactgga gtttgggtaa
     5401 agcaggctgg ttgctgttac agcactgtgg ttgtcacaca atggaacact gacgtaaaaa
     5461 acagtcagtg ggcgagtgga tacatcgttg ccgccagaca acaacccata cttttggttt
     5521 gccggatatt ggcgcgccag tcgtgctcaa ctccggctac agccaaaatt gcgctcaccg
     5581 gtgcagtgag ctttggtatg ctccttcgcc agatagtcag cacgttccag cacttgctga
     5641 aagccggtgt catcattacg cgccagccac accgccggcc aggccggaaa atgcaccagc
     5701 gtggcatggc acccgacatc cactcccagg gcactgcacc acgcctgttt aatcatcccg
     5761 gccagagact ccggagcgcg gtaatcaccg gcacgacacc aggtatcccg gttgaccagc
     5821 agcatcaggt gatagtgttt tttacctttg cactccccaa actcccgggc ccagacgtaa
     5881 tgcagggttg tgggatgcac gcgtttacct tcccgatgct tacgtttctg gtaagcgtcg
     5941 attcgggctt tcagggcatt gatgaagcgg gatatcacag ctgcgtccgt tgctgccggt
     6001 acatccggga gacgcaggtc aacccgcaat gccgtcaggc ggggatgaac attcagtgcg
     6061 tgccgcaccg tctcacgaat acgttgctgc cagaaggggt tgtatttgta ggtcatggtt
     6121 aaatctccgt atggttcata cggaatagcc acgtcgtaaa aaatacgcag agtccctgaa
     6181 gtgacctccg gcaggacact gtctcaggca ctctgtgata acccgaacgg tcgtctccgg
     6241 actgacggtt gaattttcag cgtcgttttt taatgtaaaa aaccggttac gggtaaggct
     6301 gtgaggaggg agtgatggtg atacgcaaaa agaagtgcag ggactgtgga aacgcgatta
     6361 ctcataatac agtgtgttgc ccgtattgtg gttctgtcga ccccttcggc tactaccgga
     6421 atacagaccg tatcgttacc atactgctgg cgctgattat tgtggtcctg ctgactactg
     6481 tcagcgtcag tgtgtgtata ctgtgtagct ggtgagataa cggttcatgt atcccctgag
     6541 ctgacagtgt accgtgtata ttaagcgtaa ccgacaggtt ctccttcata ccatattaaa
     6601 ttttccaggg attgccgctg ccttatttcg tcccatacag gaaaactcat ctgggtttct
     6661 gacaaatacg cgaaactcac agcccctcaa tatcaaccac acgttgtaag ccggtaatac
     6721 ctgaaaatca gcctattacc gcccacgcct ccggcaccat tcccttttga tttcgaattc
     6781 tttgttgtcg ctataccgct taatgttccc ggtcctccgg tgcagataac accggagtca
     6841 tcgtagcgct gcttcaatat tcaggtgacg tatttccaga cggaagccgg cgcgcgatcg
     6901 taaagtttgt tcattgtcag ttctgccagc cggttgtcaa cggcagagtt aaaggcttcc
     6961 agctccgcaa gggtaagttt ataacgcgtg tgggaattca cttttcccgc gtctcctgac
     7021 gtattacggg ctgccactta cctggtgtcc cgcaatacag ccttagtgtt ccgttatcgg
     7081 ggatccggac gcaccgcaac aaccggggaa gtatttctgg tttagagcag tgtcaagagg
     7141 gatttctcag cccctcactc accggctcag tctcagggca ggagcattaa tacgctcagt
     7201 tcatgtctta tacaggaatg ggcacagggg gagctggcgt gtcactgctg attttacgca
     7261 tcagcgttca tgtatctgca ctctgataca tgaacgattc acagcgctct gttaccggag
     7321 agatttactc tcttagctta ctctggcaaa tcctttacgt tactctctga tgacttctta
     7381 tatttataat accaatcaga cagccttatc ccatcggtga tatcagtctc ctcctcgcca
     7441 ggaacgggct gactcactgt aactacctcc gaaaacaact ctgcaattat cagaacgcct
     7501 gcttctctcc ctgtcctcac gaaaactatc ccctctttat cgcgcgtgcg tgcggaagca
     7561 tcttttcgca acaaccaccc ggtataccgg tacggctcag ccaccgcaac ctccccgttt
     7621 atctcctggc ggtcacattc ccgattattt tttacgtttc tccccggttg ttatgccggt
     7681 gaaggtggcg cgctgttttc atgaccacac cggctggttt aacaacatcc ggaggaacat
     7741 tctcatggct accccagttt cactgatgga tgaccagatg gtcgacatgg catttatcac
     7801 tcaactgacc ggcctgacag ataagtggtt ttacaggctc atcagggatg gggcctttcc
     7861 ggctcccatc aagctgggcc gcagctcccg ctggctgaaa agtgaagtgg aagcctggct
     7921 acaggcgcgt attgcacagc cccgcccgta atttctgacc gttatccgtt cacccgcagc
     7981 agacgtaatc cccggcctgc cggcggcatt ctgctgcctg ttatatcccc gtgaggaata
     8041 tgaaaatgaa acaacagtat cagacccgct acgaatggct ccacgaaagc taccagaaat
     8101 ggctgaccgg cttcacccgg cacgccgtat cctggggcgt gtgtcatccg aatatctact
     8161 acttccataa tctgacgccc ggttgggtgt cattcaatgg tgaaaaaccg gagattgcca
     8221 tcgtacccca gagcctgcac cggctgattt atggccctga caaacgggcc acgccgcccc
     8281 tggatgatga tctgatagtg aatttatgca ccagtgaaca tctgctggtt catcatccga
     8341 tgctggaagg cattctcctg tctgaatgtg aacgtctgag gcagcgttct ctggcaaata
     8401 aactgatcag cctcttccgt cagtttggtg gcacggagtt gcgcctcaaa ctggtctggc
     8461 tttgctggct tgatttaatg accggaaaca gccttgaaga ctggaaagag aacctgaaac
     8521 ggaaatcaga aaaagagctg gaggaatgga tcatcaaccg tcagaggcag agcgcagcac
     8581 tgacggatct gatggatcag tacgtgctcc tggcataccg cacaacggtt gacgatagcc
     8641 gcaactgatg ccggttgctt ccggaaggtg tgacaaaata cggaaatgat gatgctcccg
     8701 gcccccatgc tcacctgcag agcgtgttcg tcgtcatcat actgagccat gacgggcgtc
     8761 ttaagggcat cctgtcattg ctgagcaggc aacaccacca gaggagccac ggacagggat
     8821 gttctttaca gcccgataca cgccaggttc tcagcagact gaatgtgcag gtgcggttat
     8881 tcaccagaaa tggcatgctg cggtacatac ccatcctggt gacaatatgt acgtggcgac
     8941 agcgatcccg gcactgtgga agagactcac tcagcctgca ggatattctt tccggcatcc
     9001 gggaatgtcc gcctgaatgc aaacaggatg atatttgaat ccgtaatact gttctttcat
     9061 cataaataat ttatgcagat acagttaacc gttacagtag ccggtttgtt ttaccgggaa
     9121 ataatatccg tcagactgat accggaacat atctgaaaca cgttatgatg ttttgttatc
     9181 agaaatgttg tatattctta tccgtggcga cagtttaatg ccctctggta tcacctgata
     9241 atgtatatcc tgcgatgatt cgttatattt acgggacacg cctcttttca ttgtgctcct
     9301 tttcagactt cattttccgt aagtgttccc cggcataaag gaggtacctt tctggcgttt
     9361 ataactctct ttatcggtga cgccggtaat acagggaata ccacaccgac aaacgaggta
     9421 ttaacagacg atatttcagt gtccataatt tttctgtccg gttaaataac gtcagtctgc
     9481 tgccctctga ctgtaatcat caaagccgga atgcataccg ggttacaacg taaaaaaagt
     9541 gatgctggcc cccggtgcag ctggcgggcg aaacatgttt acctttcaat accccctgtc
     9601 tgcagtctcc actcttccat cctcttaagc tacgtcggcc acatgagtgc acttccatga
     9661 taacaggtat tcctgtcagc ataacgaagc cggttacctt cccttcctcc tgcatttcct
     9721 gtcagaatga ctatacagcg cgcagattgc ctttttattg accatcttaa tataccgtta
     9781 taaacttctt tttatcatat tattatcacc ttattatgtt taatttttaa gcagtcggag
     9841 aaagaggatg gttcagaaaa ttttgtcgga taaggttatg aatgaaagaa caaatgcgta
     9901 ttactcttat tatcttggag agcgtaatat ctccgtactg ccccttaatg tttatgatcc
     9961 cccggaacgt tttatcgctt acataaaaaa aaacagagaa aatctgaaca tcacactttc
    10021 agattttgaa cttgaacaaa taatttctgg tatgcgtctg aaggccctgg ccttcctggt
    10081 ccccctggaa aaaatatcct ggatcgcggg cagtgaacgc gcatgcttat tttcctggta
    10141 tctgttgatg cagtttatcc agaataacag ggcaaaaata agcgcagact tgcttcaaaa
    10201 gaataaactg tatcttaaag aagagtatct ggaagggaat gccttcccgt cggactcatc
    10261 gacacagttc agacaaatac tcagagttct cgatattctt tctgataaga atttgcggga
    10321 tgagtggata atccagacca aagacagatg gatgcgggca tttaaatcaa agagtccttt
    10381 cagttacctc ctcccggaga acgaacatga atgcatatgg acatggaatt atttgaaggg
    10441 aaaaaatatt gcactggaaa aactggccag ttttcctggt tctgctgata tttaccacgc
    10501 aattcacctt tcatttgaca tatgggttac ctgtccactc acctcacctg acgatataaa
    10561 aaatttcaga aacagtttca ataaggccaa ggcgcagcgc aagtacaaaa aaatgcagga
    10621 agataaagtc aatgtacagt tttttcttga cgcagaaacc agggcgcagc tcaaagaatt
    10681 atcgagggtc agaagactca gtaccggcga aatgctgcat gacctgattg ttgaagagta
    10741 taaaaggtac cgacattcca gataatttca gacatatatt atctccgtga gtcccccgcc
    10801 acctttccgg tgtgcggggg ttttgtcttt tttcaccggg aatacatgta tgaatccgtc
    10861 tgatgccatt gaggcaattg aaaaaccgct ctcctccctg ccttactcac tttcccgtca
    10921 catcctggaa catctgcgca aactcaccag tcacgaaccc gtgattggca ttatgggtaa
    10981 aagcggggcc ggtaaatcct cactctgtaa tgcactgttt cagggggagg tcaccccggt
    11041 cagtgatgtt cacgccggca cccgggaagt gcagcgtttc cgtctgagtg gccatggtca
    11101 cagcatggtt atcactgacc tgcccggggt gggcgagagc cgggacagag atgcagagta
    11161 tgaagccctg taccgtgaca ttctgcctga acttgacctg gtactgtggc tgattaaagc
    11221 cgatgaccgt gccctgtctg tggatgagta tttctggcga cacatcctgc accggggaca
    11281 tcagcaggtg ctgtttgtgg tgacgcaggc cgacaaaacg gagccctgcc atgaatggga
    11341 tatggccggt attcagcctt ctcccgcaca ggcacagaat attcgcgaaa aaacggaggc
    11401 ggtattccgt ctgttccggc ccgtacatcc ggttgttgcc gtatcggccc gcaccggctg
    11461 ggaactggat acgctggtca gtgcgctaat gacagcactt cccgaccatg ccgccagtcc
    11521 cctgatgacc cgcctgcagg acgagctgcg cacggaatct gtccggggtc aggcccgtga
    11581 acagtttacc ggtgcggtgg accggatatt tgacacggcg gagagcgtct gtgttgcctc
    11641 tgttgcccgt acggttctgc gtgccgtccg tgacacggtg gtctctgttg cccgcgctgt
    11701 atggaactgg attttcttct gaacagtctg ccagggaaat gcctgataac attacgttaa
    11761 ccaactgaaa acatgacaca aacccctcat actcctcctg tttctcttgc gtgaccgcct
    11821 tgtcgttaat agaataaaac tatcgataaa acagatatcg atcgttgcta tcgatcgttt
    11881 atagtggtta atggtctgcg aaaaggcagc tgaatctctt catcatgcag aacggaattg
    11941 cacacaacgg actgatactt ctctggcgga tgagagaggg gaagcattta tgtccgggaa
    12001 aaaccacttt atctgaccat gctgttttgt acctgccggt atccactttt gtgggtaccg
    12061 gcttttttat tcaccctctg taaggaaaag ctgatgaaac gacatctgaa caccagctac
    12121 aggctggtat ggaatcacat tacgggcacc ctggtggtgg cttccgaact ggcccgctca
    12181 cggggaaaac gcgccggtgt ggcggttgtg ctgtctcttg ctgctgtcac atcagtcccg
    12241 gcactggctg ctgacacgat tgtacaggcg ggagaaaccg tgaacggcgg aacactgaca
    12301 aatcatgaca accagattgt tctcggtacg gccaacggaa tgaccatcag tagcggtctg
    12361 gagtatgggc cggataacga ggccaatacc ggcgggcaat ggatacaaaa tggcggtatc
    12421 gccaacaaca ctactgtcac cggtggtggt cttcagagag tgaatgccgg aggaagcgtt
    12481 tcagacacgg ttatcagtgc cggaggcgga cagagccttc aggggcaggc agtgaatacc
    12541 actctgaacg gcggtgagca gtgggtacat gaaggcggga ttgcaacggg taccgtcatt
    12601 aatgagaagg gctggcagac cgtcaaatcc ggcgcaatgg caaccgacac ggttgtgaat
    12661 accggcgcgg aagggggacc agatgcagaa aatggtgata ccgggcagtt tgttcgcgga
    12721 aatgccgtac gtaccactat caatgaaaat ggtcgtcaga ttgtggctgc tgaaggaaca
    12781 gcaaatacca ctgtggttta tgccggcggc gaccagacgg tacacgggca tgcgctggat
    12841 accacactga atggcggtta ccagtatgtg cacaacggcg gtacggcgtc tggcactgtt
    12901 gtaaacagtg acggctggca gattatcaag gaaggtggtc tggcggattt caccaccgtt
    12961 aaccagaaag gcaaactgca ggtgaacgcc ggtggtaccg ccacacatgt caccctgaaa
    13021 cagggtggag cactggttac cagtactgcg gcaacggttc ttggcagcaa ccgtctgggc
    13081 aatttcacgg tggaaaacgg taaggctgac ggagttgttc tggagtccgg cggtcgcctg
    13141 gatgtactgg aaggccattc agcgcagaaa acacgggtgg atgacggcgg aaccctggca
    13201 gtgtctgccg gtggtaaggc aacaggtgtc accatgacat ccggtggtgc cctgattgca
    13261 gacagtggtg ccactgttga ggggaccaat gccagcggta agttcagtat tgatggcaca
    13321 tccggtcagg ccagcggact gctgctggaa aatggcggca gctttacggt taatgccgga
    13381 ggactggcca gcaacaccac tgtcggacat cgtggaacac tgacgctggc tgccggggga
    13441 agtctgagtg gcagaacaca gctcagtaaa ggtgccagca tggtactgaa tggcgatgtg
    13501 gtcagtaccg gcgatattgt taacgcaggg gagattcgct ttgataatca gacgacaccg
    13561 gatgccgcgc tgagccgtgc tgttgcaaaa ggcgactccc cggtaacgtt ccataaactg
    13621 accaccagta acctcaccgg tcagggtggc accatcaata tgcgtgttcg ccttgatggc
    13681 agcaatacct ctgaccagct ggtgattaat ggtggtcagg caaccggcaa aacctggctt
    13741 gcgtttacaa atgtcggaaa cagtaacctc ggggtggcaa cctccggaca gggtatccgg
    13801 gttgtggatg cacagaatgg cgccaccaca gaagaaggtg cgtttgccct gagtcgcccg
    13861 cttcaggccg gcgcctttaa ctacaccctg aaccgtgaca gcgatgaaga ctggtacctg
    13921 cgcagtgaaa atgcttatcg tgctgaagtc cccctgtata catccatgct gacacaggca
    13981 atggactatg accggattct ggcaggctcc cgcagccatc agaccggtgt aaacggtgaa
    14041 aataacagcg tccgtctcag cattcagggc ggtcatctcg gtcacgataa caacggcggt
    14101 attgcccgtg gagccacgcc ggaaagcagc ggcagctatg gcttcgtccg tctggagggt
    14161 gacctgctga gaacagaggt tgccggtatg tctctgacga caggggtgta tggtgccgca
    14221 ggccattctt ccgttgatgt taaggatgat gacggttccc gcgccggcac ggtccgggat
    14281 gatgccggca gcctgggcgg atacctgaat ctgacacaca cgtcctccgg cctgtgggct
    14341 gacattgtgg cacagggaac ccgccacagc atgaaagcgt catcggacaa taacgacttc
    14401 cgtgcccggg gctggggctg gctgggctca ctggaaaccg gtctgccctt cagtatcact
    14461 gacaacctga tgctggagcc acaactgcac tatacctggc agggacttac cctggatgac
    14521 ggccaggata acgccggtta tgtgaagttc gggcatggca gtgcacaaca tgtgcgtgcc
    14581 ggtttccgtc tgggcagcca caacgatatg agctttggtg aaggcacctc atcccgtgac
    14641 actctgcgcg acagtacaaa acaccgtgtg agtgaactgc cggtgaactg gtgggtacag
    14701 ccttctgtta tccgcacttt cagctcccgg ggtgacatga gcatggggac agccgccgcc
    14761 ggcagtaaca tgacgttctc accgtcccgg aatggcacgt cactggacct gcaggccgga
    14821 ctggaagccc gtgtccggga aaatatcacc ctgggcgttc aggccggtta tgcccacagc
    14881 gtcagcggca gcagcgctga aggttataac ggtcaggcca cgctgaatgt gactttttga
    14941 taatcaggtc actctccttc aggccccggt catcatgacc ggggcttttt actttcaggg
    15001 agcaacagat atgccgggtt gtacatcacg tttattgccc gaaggccctt tctcacgcga
    15061 acaggctgtt gccgtcaaaa cagcttaccg caatgtgttt actgaagatg accagggaac
    15121 atattcccgg ctggttatcc gtaatgctga aggtcagttg cgctggtgat gccggaacac
    15181 agcttaatac tcagctcgcc agttaagggc ttctcagaca ataaacgtca ttcatttcat
    15241 ctgtcaggcc gcgtcttctc cgggagacgc agctttttca tttattacac cagtaaatcg
    15301 taaccaccga taaggagcaa attatgcgac tagccagtcg ttttggttat gcgaaccaga
    15361 tacgccgtga ccgtccgctg acacacgaag aactgatgca ctatgttccc agtattttcg
    15421 gtgaagaccg gcatacttcc cgcagtaaac gatatgcgta cattcccacc atcaccgtac
    15481 tggaaagcct gcagcaggaa ggttttcagc cattcttcgc ctgccagacc cgcgtgcgcg
    15541 acccgggccg ccggggatac acaaaacaca tgctgcgtct gcggcgggcc ggagagataa
    15601 acggagaaca tgtccctgaa attattctgc tcaactctca tgacggtacc tccagctacc
    15661 agatgctgcc gggttacttc agattcgtct gccagaatgg ctgcgtctgc ggtcagtctc
    15721 tgggggaagt gcgtgttcca caccggggaa atgtggtgga gaaagttatc gaaggggctt
    15781 acgaagtggt gggggttttt gaccggattg aggaaaagcg tgatgccatg cagtcgctgg
    15841 tcctgccgcc accggcacgc caggcgctgg cacaggcggc actgacttac cgttatggtg
    15901 acgaacatca gccagtcacc accgctgaca ttctgacacc acgacgcagg gaggattacg
    15961 gtaaagacct gtggagcgca tatcagacca tccaggagaa tatgctgaaa ggcgggattt
    16021 ccggccgcag tgcaaaagga aaacgtatcc acacccgtgc cattcacaac atcgacaccg
    16081 atattaagct caaccgcgca ttgtgggtaa tggcagaaac gctgctggag agcctgcgct
    16141 gatgcagcat gtccctgaag gcgtgattca ggcaccagaa tcacccgacg ccccggaggc
    16201 gctgccgggg tgtcgttcca tttctgatga tgacctgtgc gcctggtgta cccgtctgct
    16261 ttaccgtccc ggagaaatca gtctgtgcag actgagtata caggcaatgg catctggcca
    16321 tccgtctgtg accggaacgg ttacgcgtac ggctgtccgg aatttcagcc gaatatcatt
    16381 catccctgat attaccgggt catcacggtc agtgatgaac gtgatgttgc cagctcccga
    16441 cctttactcc ctctcattta ttcacattac aaggatttca tacatgaaaa cattgtctca
    16501 gaacaccacc gcttcggcct gtgcaccgga gactggcctg caacaactgg ttgccactcc
    16561 cgtccctgat gaacagcgca tcagcttctg gccgcagcat tttggcctca ttccacagtg
    16621 ggtcaccctg gaaccccgtg tcttcggctg gatggaccgt ctgtgtgaag actactgcgg
    16681 tggtatctgg aatctgtaca ccctgaacaa cggcggggca tttatggcac ccgaaccgga
    16741 tgacgatgat gacgaaacat gggtactgtt caatgccatg aacggtaacc gcgctgaaat
    16801 gagcccggaa gccgccggca ttgctgcctg tctgatgacg tacagtcatc atgcctgtcg
    16861 tacggagtgt tatgccatga cggtccatta ttaccggctg cgggattacg ccctgcagca
    16921 tccggaatgc agcgccatta tgcgcatcat cgactgaatg gaggcaggga caatgcagca
    16981 gctttccttt ctgcccggaa acatgacgcc cggcgagcgc agtctcattc tgcgggccct
    17041 gcaaaccctg gaccgccatc ttcatgaacc cggcgtggcc ttcacctcca cccgtgcggc
    17101 acgggaatgg ctgattctga acatggcggg actggagcgg gaagagttcc gggtgctgta
    17161 tctgaacaac cagaatcagc tgattgccgg tgaaaccctc ttcaccggca ccatcaaccg
    17221 tacggaagtt catccccggg aagtgattaa acgcgccctg taccacaatg ccgctgccgt
    17281 ggtgctggcg cacaatcacc cgtccggtga agtcacaccc agtaaggcag accggcttat
    17341 caccgaacgt ctggtacagg cactgggcct ggtggatatc cgggtgccgg accatctgat
    17401 agtcggtggc aaccaggttt tctcctttgc cgaacatggt ctgctttaac ccgtcacaac
    17461 cacatcacac ctgttttcac ttttatcttc tgtcttcaga ggtatcacat catgagaatc
    17521 atcacccgtg gtgaagccat gcgtattcac caacagcatc ctgcatcccg tctttttccg
    17581 ttctgtaccg gtaagtatcg ctggcacggc agtgctgaag cgtatactgg tcgtgaagtg
    17641 caggatattc ccggcgttct tgccgtgttt gcagaacgcc gtaaggacag ttttggcccg
    17701 tatgtccggc tgatgagtgt caccctgaac tgatgttccg tcacccggga aacgagtacg
    17761 accagatgac ctcagacgcc gctgtggatg aggccattct catcaatgca tacatcttca
    17821 ccgaaaccgg tcagcgcgcc ggctgacctg tcatcgttaa accattctta accacttttc
    17881 agagaggatt ttatcgtgtc agacaaactc tccgggataa ctcatcccga tgacaatcac
    17941 gaccgcccct ggtgggggct tccctgcaca gtgaggccct gttttggcgc tcgtctggtg
    18001 caagagggta accgcctgta ttaccttgcc gaccgcgccg gtatcagagg ccgcttcagc
    18061 gacgcagatg cataccatct ggaccaggcc tttccgctgc tgatgaaaca actggaactc
    18121 atgctcacca gcggtgaact gaatccccga tatcagcata ccgtcacgct gtatgcaaaa
    18181 gggctgacct gcgaagccga caccctcggc tcctgtggtt acgtttatct ggctgtttat
    18241 ccgacaccag cacccgcaac cacctcataa ccccgaagct ctcaccttta gcactaccag
    18301 ttacagagaa cttaagatga aaacattatc cgacacacat gtacgggagg tatctcgctg
    18361 cccgtctccc gtcaccatct ggcagacact gctcatccga ctgctggacc agcattatgg
    18421 cctcacactg aatgacacac cgtttgtcga tgaacgtgtg attgagcagc atattgaggc
    18481 aggcatttca ctgtgtgatg cagttaattt tctcgtggaa aaatacgcgc tggtgcgtac
    18541 cgaccagccg ggattcagca cctgtccccg ctctcagtta ataaacagta ttgatatcct
    18601 ccgggctcgc cgggcgaccg gcctgatgac ccgcgacaat tacagaacgg taaataacat
    18661 taccctgggt aagtatccgg aggcgaaatg atgaaactgg ccctgacact ggaagccgac
    18721 agcgttaacg tacaggcact gaacataggg cgcattgtcg ttgacgtcga tggtattgag
    18781 ctcgctgaac tgattaacat ggtctgcgat aacggctact cccttcgtgt tgttgatgaa
    18841 tctgaccaga cctcagcaga atgcacgcca ccatttgcta cccttaccgg catacgctgc
    18901 agtaccgcac atatcacgga aacggacaac gcctggttgt actcgctgtc acaccagacc
    18961 agtgacttcg gtgaatcaga atggattcat tttacaggta gcggatatct gttacgtacc
    19021 gatgcgtggt catacccggt tctgcggctt aaacgcctgg ggctgtcaaa aacgttccgt
    19081 cgtctggtcg tcacactcat ccggcgttat ggcgtcagtc tcattcatct ggatgccagc
    19141 gctgaatgcc tgccgggttt acccactttc gactggtaac caggaacaac atgaaatcat
    19201 taaccacgga aacagcgctg gatattctga ttgcgtggct gcaggacaat atcgactgcg
    19261 gatcgggaat tatctttgac aacgatgagg ataaaacgga ttcagcagca ctgttgccct
    19321 gtatcgaaca ggcccgggag gatgtccgta ccctgcgtca tctgcagctt ctgcaccaga
    19381 accggtgaag ctcactcacc agacttcatt cctctgacgc cagcctgcac agggctggcg
    19441 ttttcattta tctgcaaaaa ggaatatcga ttatgtcaga tatcacaatc tcccgtccgg
    19501 aagtggtcaa cgggcatacg gacgttatct gctcaaccag cattcgccac attctggctg
    19561 tacgaaagag tacactgttg caaatcgaca cacttatccg acaactggct gaaatctcgg
    19621 tgctgacgga aagcatcgga ggtaaaactg ccccggactg ggccatgaaa caggattttc
    19681 gctgcggctg ctggctgatg gagaaacccg aaacagcaat gaaagccatt acccggaatc
    19741 ttgatcgcga aatctggcgt gacctgatgc aacgttccgg gatgctgtca ttaatggata
    19801 cgcaggcccg tgatacatgg taccggtcac tggagtacga taattttccg gaaatcagcg
    19861 aagcgaacat tctgagcaca tttgaacaac tgcaccagaa taaggatgag gtgtttgagc
    19921 gaggggtgat caacgtcttc agagggctga actggaatta caaaaccaat tgcccctgta
    19981 aatttggcag taaaattatc gtcaacaatc tggtgagatg ggaccggtgg ggataatgat
    20041 atggtcaccc ccaccttaac agcagtacgc tgttaaggta aatcccttta acggagagac
    20101 catcatgcag aacatcacac ttattggtat cgatctcgga aagcactcct tccacattca
    20161 ttgtcaagac aagtctggta aggctcttct gcgtaaaaaa tttacccgta ctaaactgat
    20221 gcagtttctg gcgacatgtc cgccctcagt tgttgtaatg gaagcctgtg cgggtgcaca
    20281 ctttatggct cgctgtatct ctgattttgg gcatgaaact aagctgattt ctccacagtt
    20341 cgttcgcccg tttgtcaaaa gtaataagaa tgattttgtt gatgcagaag ccatatgcga
    20401 agcggcttca cgaccatcaa tgcgttttgt ccagccaaga actgagaccc agcaggccat
    20461 gagggcgtta caccgggtca gagaatcgct catcagagat aaggtgaaaa caaccaacca
    20521 gatccacggt ttcttgctgg aatttggaat cagcctgccg ataggtgatg ctgtaataaa
    20581 acggttgtct ctcgtgttgg ctgaacacga aatccccgaa tatctgagcc gccttttggt
    20641 gaggttgcat acccactact tttaccttgt tgagcaaata gcagagctgg aatcagaatt
    20701 aagtcagtca atcaacgctg atgataccgc tcagcgcatt atgacaattc ctggtgttgg
    20761 tccgattact gccagcttac tatcgtcgca acttggtgac gggaaacagt tctcatgcag
    20821 cagggatttt gcagcttcca caggacttgt tccccggcag tatagcactg gaggaaaatc
    20881 gactctgttg ggtatcagta agcgaggtga taaaaattta cgccggttac tggttcagtg
    20941 tgcccgctca ttcataatgc gacttgaacg caagcatgga aaacttgctg agtgggttcg
    21001 ggagcaactc aacaagaagc attcgaatgt ggttacctgc gctctggcaa ataaactggc
    21061 tcgaattgcc tgggcaatca ctactcagaa aaaagaatat caggcctgat atagatgctg
    21121 atataactca attagtttat tttaaacaat aagatacaag ttacctttct ggttttgcga
    21181 agactgatta ttgatgacat gaacggcaaa tcgacctgat taaaaaccta acagatgaaa
    21241 tggctcactg aagccgaggg gatttttagg attatcaggt gcggaactca tcggggcgcg
    21301 ggcatccttg cccacagaga cgccggatag atttaagcaa gccaaccatt aatcaaaaat
    21361 cagtgttgca aaaacggggg tgaccataga ttcatcttat caccggacaa caggctgacc
    21421 gactcgccga tctggaaaga atgttgcacc tgttcagcgg taaaccaa
//
LOCUS       DADKRT010000061        21036 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.062, whole genome shotgun sequence.
ACCESSION   DADKRT010000061 DADKRT010000000
VERSION     DADKRT010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 21036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21036
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.062"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            28..1347
                     /gene="potE"
                     /locus_tag="JQ356_001912"
     CDS             28..1347
                     /gene="potE"
                     /locus_tag="JQ356_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine-ornithine antiporter"
                     /protein_id="HAY4622022.1"
                     /translation="MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIIS
                     WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA
                     IAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIP
                     VVGLCIIGWFWFSPTLYANSWNPHHVPFFSAVGSSIAMTLWAFLGLESACANAEVVEN
                     PERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKV
                     IMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQS
                     GLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVA
                     FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPCFELKNKHG"
     gene            1375..1572
                     /locus_tag="JQ356_001913"
                     /pseudo
     CDS             1375..1572
                     /locus_tag="JQ356_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001405579.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1696..2346
                     /locus_tag="JQ356_001914"
     CDS             1696..2346
                     /locus_tag="JQ356_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 domain-containing protein"
                     /protein_id="HAY4622023.1"
                     /translation="MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKNLAETALY
                     QLQVTTKSPMGALVYGSGGLLIDNGWLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPI
                     ADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN
                     VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ"
     gene            complement(2387..2881)
                     /locus_tag="JQ356_001915"
     CDS             complement(2387..2881)
                     /locus_tag="JQ356_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622024.1"
                     /translation="MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTR
                     RLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPG
                     WQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
                     INTH"
     gene            complement(3096..4736)
                     /gene="pgm"
                     /locus_tag="JQ356_001916"
     CDS             complement(3096..4736)
                     /gene="pgm"
                     /locus_tag="JQ356_001916"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HAY4622025.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI
                     VDMEAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(4762..5307)
                     /gene="seqA"
                     /locus_tag="JQ356_001917"
     CDS             complement(4762..5307)
                     /gene="seqA"
                     /locus_tag="JQ356_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HAY4622026.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
                     VTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
                     AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
                     EHIMQSMQFPAELIEKVCGTI"
     gene            5492..6256
                     /gene="ybfF"
                     /locus_tag="JQ356_001918"
     CDS             5492..6256
                     /gene="ybfF"
                     /locus_tag="JQ356_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY4622027.1"
                     /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
                     IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA
                     RDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
                     FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPSGNSPYVSEQYRDDLL
                     AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
     gene            6327..6689
                     /gene="ybfE"
                     /locus_tag="JQ356_001919"
     CDS             6327..6689
                     /gene="ybfE"
                     /locus_tag="JQ356_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HAY4622028.1"
                     /translation="MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPG
                     RPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSEL
                     IEEMLMQQLAALRSQGIV"
     gene            6829..7359
                     /gene="fldA"
                     /locus_tag="JQ356_001920"
     CDS             6829..7359
                     /gene="fldA"
                     /locus_tag="JQ356_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HAY4622029.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQISEELHLDEILNA"
     gene            7569..7655
                     /gene="uof"
                     /locus_tag="JQ356_001921"
     CDS             7569..7655
                     /gene="uof"
                     /locus_tag="JQ356_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fur leader peptide"
                     /protein_id="HAY4622030.1"
                     /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD"
     gene            7648..8094
                     /gene="fur"
                     /locus_tag="JQ356_001922"
     CDS             7648..8094
                     /gene="fur"
                     /locus_tag="JQ356_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HAY4622031.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
     gene            complement(8179..8505)
                     /locus_tag="JQ356_001923"
     CDS             complement(8179..8505)
                     /locus_tag="JQ356_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622032.1"
                     /translation="MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP
                     EKIEACQSVLNVLKKEKQHQHFPDQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE
                     IRSNNK"
     gene            complement(8555..9967)
                     /gene="chiP"
                     /locus_tag="JQ356_001924"
     CDS             complement(8555..9967)
                     /gene="chiP"
                     /locus_tag="JQ356_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HAY4622033.1"
                     /translation="MRTFSGKRSTLALALAIAGVTAMSGFMAMPEARAEGFIDDSTLT
                     GGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAVFTAIEMA
                     ENGDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQT
                     LLAPHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTT
                     KVDYLHSLGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGT
                     RDKVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPAY
                     ASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATW
                     QSNPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYG
                     NIFQDERDVKFMVIAPFTIF"
     gene            complement(10414..12078)
                     /gene="glnS"
                     /locus_tag="JQ356_001925"
     CDS             complement(10414..12078)
                     /gene="glnS"
                     /locus_tag="JQ356_001925"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY4622034.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
                     LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTRQDNTIEMASLESCIRE
                     DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSSEIWIDRAD
                     FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG
                     RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL
                     KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
     gene            complement(12281..14227)
                     /gene="nagE"
                     /locus_tag="JQ356_001926"
     CDS             complement(12281..14227)
                     /gene="nagE"
                     /locus_tag="JQ356_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HAY4622035.1"
                     /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
                     GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
                     ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
                     TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
                     QNVWMLLVMGVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLNQL
                     ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDAMKKVVARGPVAAASAEATPSTAAPVAKPQAVPNAVSIAELVSPITGD
                     VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
                     VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
                     FSGLIIKAQGHVVAGQTPLYEIKK"
     gene            14560..15360
                     /gene="nagB"
                     /locus_tag="JQ356_001927"
     CDS             14560..15360
                     /gene="nagB"
                     /locus_tag="JQ356_001927"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HAY4622036.1"
                     /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
                     PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG
                     CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
     gene            15420..16568
                     /gene="nagA"
                     /locus_tag="JQ356_001928"
     CDS             15420..16568
                     /gene="nagA"
                     /locus_tag="JQ356_001928"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HAY4622037.1"
                     /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
                     SDELMKQGVRVMREYLARHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
                     ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
                     NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
                     ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ"
     gene            16577..17797
                     /gene="nagC"
                     /locus_tag="JQ356_001929"
                     /gene_synonym="nagR"
     CDS             16577..17797
                     /gene="nagC"
                     /locus_tag="JQ356_001929"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HAY4622038.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
                     FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
                     DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYIGRHLGKTIAIAINLFN
                     PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
                     AMLNGILLQHLLEN"
     gene            17845..18597
                     /gene="nagD"
                     /locus_tag="JQ356_001930"
     CDS             17845..18597
                     /gene="nagD"
                     /locus_tag="JQ356_001930"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
                     /protein_id="HAY4622039.1"
                     /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY
                     PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
                     GFTITDVNPDFVIVGETSSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC
                     AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
                     LVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI"
     gene            18994..20658
                     /gene="asnB"
                     /locus_tag="JQ356_001931"
     CDS             18994..20658
                     /gene="asnB"
                     /locus_tag="JQ356_001931"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HAY4622040.1"
                     /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
                     ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
                     ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS
                     EMKSLVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
                     SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP
                     GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAQQVSNQQLETARFRFPYNTPTSKEAYLYREIFEELFPL
                     PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK"
BASE COUNT         5213 a         5277 c         5278 g         5268 t
ORIGIN      
        1 aagcaccctg ttgaaagggg aaaaattatg agtcaggcta aatcgaacaa aatgggcgtc
       61 gttcagttaa ccatactgac gatggtcaac atgatgggct ccggtatcat catgctgccg
      121 acaaagcttg ccgaagttgg gacaatctca attatctcct ggctggtgac agccgtaggc
      181 tcaatggcac tggcatgggc attcgcaaaa tgcggtatgt tcagccgtaa atcaggcggt
      241 atgggcggtt atgcggagta tgctttcggt aagtccggca attttatggc gaactacacc
      301 tacggtgtct cgctgctgat tgctaacgtc gcgattgcta tttcggcggt tggttacggc
      361 accgaactgc tcggcgcgag tttgtcgcca gtgcagattg gtcttgcgac catcggagtg
      421 ctgtggattt gtaccgtggc taactttggt ggtgcgcgca ttaccgggca aatcagtagc
      481 attactgtgt ggggagtcat tattccggtc gtcggtctgt gcattattgg ctggttctgg
      541 tttagtccga cgctgtacgc taactcatgg aacccgcacc atgtgccgtt ctttagcgct
      601 gtaggttctt ccatcgccat gacgttgtgg gctttcctcg gtctggagtc agcctgtgcc
      661 aacgccgaag tagtggaaaa cccggaacgt aacgtgccga ttgcagttct tggcggtact
      721 ttaggtgcgg cggtgattta tatcgtctcc accaacgtga ttgccgggat tgtgcctaat
      781 atggagctgg caaattcaac ggcaccattt ggcctggctt tcgcacagat gttcacacca
      841 gaagtgggta aagtcattat ggcgctgatg gtgatgtcct gctgcggttc actgcttggc
      901 tggcagttca ccattgccca ggtgtttaaa tcttcatctg atgaaggcta cttccctaaa
      961 attttctccc gtgtaaccaa agtggatgca ccggtgcagg gaatgttgac cattgtgatt
     1021 attcagagtg gattggcact gatgaccatt agcccgtcac tgaacagcca gttcaacgtg
     1081 ctggttaacc tggccgtggt gaccaatatc attccgtata ttctgtcaat ggcggcatta
     1141 gtcattattc agaaggtcgc taatgtgccc ccctcaaaag cgaaagtagc aaactttgtt
     1201 gcctttgttg gtgcgatgta cagtttctat gcgctgtact catccgggga agaagccatg
     1261 ctgtacggtt ctatcgtgac cttccttggt tggacactgt atggtctggt atcaccatgc
     1321 tttgaactga aaaataaaca cggttaataa aacaaagtaa aaaagggcga ttgaatgatc
     1381 gccctttctg tttgttggca aatagttcgt tatttatgcc gcatccggca gatgtagggt
     1441 ctaaacgcga tcgaacacag caactatttg cgtaattata tggggcatct gcgacaaaaa
     1501 ctggaacagg atccggcccg gcctcgccat tttattactg aaaccggtat tgggtatcgg
     1561 tttatgcttt gaaaaaagtg gcaatgtatg gataaagtca ttttttattc aaatataagg
     1621 aacttaatat ttaaaaaatg ttccatacaa ttcctcatca taaatgacac cgtagcacac
     1681 aaggagcaag tagcgatgcg tgaaatgaat cagttagtaa atactgaaga ttcagcctgg
     1741 ccaataatcc agaactggtt aaaagacgcc acaaaccata ccgaactctt accggttaat
     1801 aaaaatttag ccgaaaccgc actttatcaa ttacaggtga caacaaaatc accgatgggt
     1861 gcgcttgtct atggctccgg aggtctgctg attgataatg gttggttacg catagcagga
     1921 tctggtcacc cccggttgcc acgagatcca gtaagttgga cacaacgccc tgaattcgca
     1981 ggcgtgcggg ctttacccat cgctgacgat gtcgcagggg gaatttttgc tcttaatggt
     2041 ggcgatcttg gggaagatac tggctgcgtt tattattttg cgccagatac gctgaattgg
     2101 gaaagtctgg aagttggata ttctgagttt cttcagtggg cattatccgg tgatttagat
     2161 accttctatg aaaatgtacg atggcagcaa tggcgagaag acgtaataaa attatcggca
     2221 acggaagcct tcacgttcta ccctttctta tgggtacaaa gtgaagaagc aagaacaaga
     2281 aaagttattt cgcttactga actctgggaa atgcagtatc aaatgaaaga aacattcacg
     2341 caataagaca tgttcaggtc cgggtttcat tcccggactc actattttaa tgtgtattta
     2401 tcgctttcaa ttcttgctgg caattttctg actggcagcg tcgtaactca ataatcccga
     2461 catgcatcat cgagccaaaa aatccgcttt cgctgacata atcctcattg actatcggtc
     2521 gagtgccggg cttgccctgg caaacccgca taaaaaatga ggtgtagcat tgccaaccgg
     2581 gatttaaacc gaccttttct tgtgctgaca tattatgaag ataagtaagt tctttttcgt
     2641 tcccgcctga caactgccag cggcgggtat tatcaggtaa gttatcacca cggcaatttg
     2701 tcttacaccg ggaaggtgca atatttaccg caatgctacc cgttaatctt ctggttttat
     2761 ctttaggggt cagtaaccag tcgccagcta atgatgattg ttcaggttgg gcgcatgcag
     2821 tcagcagtaa tgtggcggta attagtgaca ctatgacgac cagactcctg ttggtcttca
     2881 ttgggatttc cttgagctac tcagtttgtt gacaaagtgt tcgttgtttt tgccggatgc
     2941 ggcgtgaacg ccttatccgg cctacaaaat ctcgtaaatt caatatattg caccatcctc
     3001 gtaggcctga taagcgtagc gcatcaggca attctgtgtt tgtcatacgt aaaaaagggc
     3061 gatcttccga ccgccctttt tcttatttaa tgtgtttacg cgtttttcag aacttcgcta
     3121 acaatctcaa ccgcttcttt ctcaatctgc ttgcgatgtt cttcaccgag gaagctttcg
     3181 cagtagatct tatatgcgtc ttccgtgcct gacggacgcg cggcgaacca gccgttgtca
     3241 gtcatcactt tcagaccgcc gatagaagca ccattgcccg gtgccgccgt caggcgcgcg
     3301 gtgatcgggt cgcctgccag ggtgctggcg ctcaccattt ccggagacag cttagacagc
     3361 gccgcttttt gtgcggaagt cgcagctgcc tgcaaacggt tgtagctcgg cgcaccaaag
     3421 cgttttgcca gttcgttgta gtgttcctgc gggttcttac cggtgacagc ggtgatttcc
     3481 gccgccagca gacacatgat gatgccgtct ttgtcggtgg accacggcgt gccgtcgaaa
     3541 cgcaggaagg aagcccctgc gctctcttcg ccgccaaagc cgaagctgcc gtcgaacaga
     3601 ccatcaacaa accatttgaa acctaccggg acttctacca gcttgcggcc caagtcattg
     3661 accacacggt cgatcatcgc agaagaaacc agcgttttac cgacagcaac atctttgccc
     3721 cactgcggac gatgctggaa caggtagttg atcgccaccg ccaggtagtg gttcggattc
     3781 atcaaacctg ccggagtgac gataccgtga cggtcataat ccgggtcgtt agcaaacgcc
     3841 agatcgaact tatcacgcag tgccagcagg cccgccatcg cacactcgga ggagcagtcc
     3901 atacggatcg cgccgtcttt atcaaggtgc ataaagcgga aggtttgatc gacctgatcg
     3961 ttaacgatgg tcaggttgag gttgtaatac tcgccaatac gcttccagta ttcgataccg
     4021 gaaccgccca gcggatcaac gcccagcgtc aggcccgctt tctgaatcgc ctccatatca
     4081 acgatatcgg ccagaccttc cacaaacggc tgcaccagat cctgctcttt cacatgaccg
     4141 gatgccatcg cttcgtcgag ggagatacgc ttcacgcctt tcaggccatc ggccagcagt
     4201 gcgttggccc tgtcttccac cactttggtg acgttggtat cagccgggcc accatttggc
     4261 ggattgtact tgataccacc atcttccggc gggttatggg acggtgtaat cacgataccg
     4321 tctgccagcg gaccaccttt tttattgtga accaggatgg cattggaaac ggcaggcgtt
     4381 ggagtgaagc cattgttttc ctgcacaatg acatcaacgc cgttcgctgc cagcacttcc
     4441 agtacggaaa tgaacgcagg ctcggacagg gcgtgagtat ctttacccac atagcaaggg
     4501 ccagtgatgc cgtttttcgc acgttcttca gcaattgcct gagcgatcgc cagaatgtgc
     4561 ggctcgttaa agctgtggcg cgctgcactg ccacggtgac cggaagtacc gaatttcacc
     4621 gcgtgctccg cattccctgc ttctggtttc agtacataat attgcgccgt cagttgggcg
     4681 acgttaatca aatcactctg ttgtgcaggt tggcctgcac gattgtggat tgccattgct
     4741 ttgtcctttg tctgcaacgt tttagatagt tccgcaaacc ttctcaatca attccgccgg
     4801 gaattgcatc gactgcatga tgtgttcgat catgctgcat ttacggccgg tgttggtgtt
     4861 ggtgatcacc caatacggcg tgcctggcac atgtttcggc ttggtctgat taccattttt
     4921 cagcagcgtt tgttcatctg ccgcaaagta aacgcgtgta cgaccgtgca acgattccgt
     4981 tgcttcggca aacgcctggg cgtcaagaga atatagtgta gacaacagca gcataaagcg
     5041 attgaccgct cgcttttgct ctgcgtattc gtcagaaagc agaagttcac gcattgcgcg
     5101 aaccttgtct ttaatcgttt tgaccggctt cgcttcgacg atagcaggtg acgcaacgcg
     5161 aacctctttc gtcaccggag cagcaggctg tgatgcggcg gaaaatttca acatacgccg
     5221 taaaatgtcg gatgcgctct cgccgatatg cttagtgtgg ctggcaatat agctgtagag
     5281 ttcatcatca acttcaatcg ttttcatctt aatccagtgc agtgtcttag ctgaatacaa
     5341 gtcgccaaga gtatatgaat aaatcccggc agcggatagc gtcaagcctg gcttgcagaa
     5401 aaactcggaa taaaccttat ttgttgcagc cctgtggcac aatggtcaac ataataccct
     5461 aacccgacaa cgcgaaaaaa agaactttgc catgaaattg aatatccgcg cgcaaactgc
     5521 acaaaaccag cacaataatt ctcccatcgt tcttgtccat ggtctgtttg gtagcctcga
     5581 caaccttggc gtactggctc gcgatctggt aaacgatcac aatatcatcc aggttgatat
     5641 gcgtaaccac ggtctttcac cgagagatcc ggtaatgaat tacccggcga tggcgcagga
     5701 tcttgttgat actctggatg cacagcagat cgacaaagca acatttatcg gtcactccat
     5761 gggcggtaaa gcggtaatgg cacttacggc actggcccgc gatcgcatcg ataaactggt
     5821 ggcgatcgat atcgcaccgg tcgactatca cgtacgccgt catgatgaga ttttcgcggc
     5881 tatcaacgcg gtcagtgaat cggacgcaca aactcgccag caagcagcag caataatgcg
     5941 ccagcatctt aatgaagaag gggtgattca gtttctgttg aaatcttttg ttgacgggga
     6001 gtggcgcttt aacgtgccgg tattgtggga tcagtatccg catattgtgg gttgggagaa
     6061 aatcccggca tgggatcacc ctgccctgtt tatccctagc ggcaattctc cgtatgttag
     6121 cgagcagtac cgtgatgatt tactggcaca atttccacag gcacgggcgc atgtgattgc
     6181 aggcgcgggt cactgggtcc atgctgaaaa accggatgcg gtattacgcg ctatccgtcg
     6241 ctatctcaat gattaacgca actgattaaa aacccagcgt ccgcgtcgct ttccgcgcgt
     6301 gggcgttggc gtgactcatc gcgctgatgt attatggcgc gctatccatc cgggcagagg
     6361 cctggctgat tgtttccccc gaagtcacca agatcatggc caaagaacaa acggaccgta
     6421 cgacattaga tctgttcgcg cacgagcgtc gaccgggacg accgaaaact aatccgcttt
     6481 cgcgcgatga acagctgcgt attaataaac gcaaccagct aaaacgcgac aaagtacgtg
     6541 gccttaagcg tgtcgaactg aagctgaacg cggaagctgt cgaggcgctg aacgagctgg
     6601 cggagtcgcg caatatgagc cgtagcgaac tgatcgaaga gatgttaatg cagcaactgg
     6661 cggcgctgcg tagtcagggc atcgtttaaa tttccacttt catgtagcac agtgtgcagt
     6721 cctgctcgtt tgctgattcc gaaagactgc ctgttctgct atgattgcct ttatccgtgg
     6781 gcaattttcc acccccattt caataagttt caagaggtta tttcactcat ggctatcact
     6841 ggcatctttt tcggcagcga caccggtaat accgaaaata tcgcaaaaat gattcaaaaa
     6901 cagcttggta aagacgttgc cgatgtccat gacattgcaa aaagcagcaa agaagatctg
     6961 gaagcttatg acattctgct gctgggcatc ccaacctggt attatggcga agcgcagtgt
     7021 gactgggatg acttcttccc gactctcgaa gagattgatt tcaacggcaa actggttgcg
     7081 ctgtttggtt gtggtgacca ggaagattac gccgaatatt tctgcgacgc attgggcacc
     7141 atccgcgaca tcattgaacc gcgcggtgca acgatcgttg gtcactggcc aactgcgggc
     7201 tatcatttcg aagcatcaaa aggtctggct gatgacgacc actttgtcgg tctggctatc
     7261 gacgaagacc gtcagccgga actgaccgct gaacgtgtag aaaaatgggt taaacagatt
     7321 tctgaagagt tgcatctcga cgaaattctc aatgcctgat gtgatgcggc gtagactcat
     7381 gtctacgccg tattaataga taatgccaat caaaataatt gctacaaatt tgtaactttt
     7441 gctgttgtac ctgtacaatg tcccggtgtt caagtggcct tgccgttgta aatgtaagct
     7501 gtgccacgtt tttattaaca atatttgcca gggacttgtg gttttcattt aggcgtggca
     7561 attctataat gatacgcatt atctcaagag caaattctgt cacttcttct aatgaagtga
     7621 accgcttagt aacaggacag attccgcatg actgataaca ataccgccct aaagaaagct
     7681 ggcctgaaag taacgcttcc tcgtttaaaa atcctggaag ttcttcagga gccggacaac
     7741 catcacgtca gtgcggaaga tttatacaaa cgtctgatcg atatgggtga agaaattggt
     7801 ctggctacgg tatatcgcgt actgaaccag tttgacgacg ctggtatcgt cacccgccac
     7861 aattttgaag gcggtaaatc cgtatttgaa ctgacacagc aacatcacca cgatcacctg
     7921 atctgcctcg actgcggcaa ggttatcgaa tttagtgatg attccatcga agcgcgtcag
     7981 cgtgaaattg ccgcaaaaca tggcattcgc ctgactaacc acagtctcta tctttacggt
     8041 cactgtgccg aaggcgattg ccgcgaagat gaacatgcgc acgaaggcaa ataagccagc
     8101 ctgaatgaga aaaagccaac ctgcgggttg gcttttttat gcaagggaaa taagaaaagc
     8161 gagagttaca gctctcactt atttgttatt actgcgaatt tcctgccaaa ctttatcaca
     8221 atcggctttc accgcctgat catttccggt ttgcgttgca cgcagacact gctgataatc
     8281 cagtacgcgg acactttcct ggtcgggaaa atgctgatgt tgtttctctt tcttcagcac
     8341 gtttaacacg ctctggcagg cttcaatttt ttctggcgaa ccttgtgcgg tgttgataca
     8401 ggcgctgtat gcctctttca gacgactgtc ttcctgtggc gcggttgatt gcgcacaagc
     8461 taccagcccc gatgccatta tggcgatgag aatcagtttt ttcatagcaa attcctcaaa
     8521 cgtgcggcag gcacaaaacc tgccgcgtcg ggcatcagaa gatggtgaat ggtgcgatta
     8581 ccataaattt cacgtcacgc tcatcctgga agatgttgcc gtaaccaccg ccccagcttg
     8641 ggatgtcgga gtggttgtcg tattcggtga agtgcagttt gaacatcgtg cctttggcgc
     8701 gaccgtcctg aatggtgtag accgcatcca ggctgtatgc agactcttca atagtccggt
     8761 ttttgtcgta gtacgcatcc ggattgctct gccaggtcgc aggtttagca tcccatgcgt
     8821 aaacgtagga agcgccgatg gcgaagcctg gaagattcca gtttttcagg tcatacatcg
     8881 caccgaagaa gaccgctttt tcgccgttag cgttgaagtc ggaacggtta tcccaccaga
     8941 tatccaggcg gccgttggag gaagcgtagg ctggagtcat acgttgcagg aagtatccct
     9001 gctgaccgtc agccttaacc caggtgcctt cgaggcgcaa atccactacg tcagccgccc
     9061 ggtaaccaaa ggtcaacgct tgcagccagg cggtgccgtc ataaaggtcg ttgacgctgc
     9121 gatcgtcaac tttatcgcgc gtaccataga actggtagct ggtggttaac gggctaccgg
     9181 cgatatcaaa tttgtagctg gctttggcaa aatattgatc gatataccct tccgcctgac
     9241 caaatgccgc ttccagtacg aagttatttt tgaagtcgta tttcgcccca agggagtgca
     9301 gataatcaac tttggtggtt ttatcgttct gataaaactc atccatttcc agatgccacg
     9361 gcgctttgta ttcgttggtc cacatgtagg agaaactcaa cgcaccagca tcgccgtaat
     9421 caaaattcgc cccggcttcc gccccctgat aagtacctgg cataaagctc cagtgcggcg
     9481 ctaacagcgt ttgaccagtt ggctgaatgt aacctgccct cgcccaaacc ggaccgtatt
     9541 taaatttggc cgcagcttta tacaggctta taccgctttt gtcgccagac cagtcttcgt
     9601 cataggcttt attacttttt gaaaacgcga tttcgttcgg gtgggagctg tcgccgtttt
     9661 ccgccatttc aatcgccgta aacacagcaa tatcaaggcc gaacatatca gcagcataac
     9721 cggactgaaa atcgaggttg gcattccagg tggagtgaga aaggttggtt ttgtatttgt
     9781 cgccgtcggt aacatcttta cggtcgcgtt cacgctgcca gtaatatata ccgccggtta
     9841 aggttgaatc gtcgatgaat ccttcggcgc gagcctccgg cattgccata aagcccgaca
     9901 ttgctgtaac accggcgata gccagcgcca gcgccagcgt actacgtttg ccactaaacg
     9961 tacgcatggg ttaatcctct ttgacgtata aattgctgca ccaaaggtga acagcgaaaa
    10021 aaataaaaat taaaaaagta gcattgagaa aagtctcgct gactacagga atagactatt
    10081 tttcgcgacg cgaattatca atctctttct gtaaccagaa tgtaagaaca tgagcaaccg
    10141 cacatatttt gatgattttt gttacaaggc ttaagtttgc ggttgaaagg cttgcagaag
    10201 aataaaagcg taaatttcca gcaagatgaa agcggttaca ttttatttaa ttatggtttg
    10261 tgattttaaa tttattttat ggataaattg cgaagcggaa ttaattcgcg aagaaaagca
    10321 gaaaaaacgc cgcagagtgc ggcgtttggg attgtttgct atttcttgcc ggatgcgacg
    10381 taaatgcctc acccggcctg gtagaactta aaattactcg cctactttcg cccaggtatc
    10441 acgcagccca acggtgcggt taaataccgg tttttccgct gtggaatggc ggctgtcgag
    10501 gcagaagtaa ccttcacgct caaactggaa tgctttaccc gcaaccgcat ctttcagcga
    10561 cggttcagca aagccctgtt tgatcaccag cgattccggg ttaatcaccg acaggaaatc
    10621 atccgcagca cctgggttag gcacgctgaa cagacggtcg tacagacgga tttcaaccgg
    10681 cagcgcatgt gccgcgctca cccagtgaat aacacctttg actttacgac catctgccgg
    10741 atctttgctt aaggtgtcgg cgtcataagt acagaagatg gtggtgatat tgccttcggc
    10801 atctttctcc acgcgttctg ccttaatgac gtaagcatta cgcagacgca cttctttacc
    10861 cagcaccaga cgtttgtact gcttgttagc ttcttcgcgg aaatcggcgc gatcgatcca
    10921 aatctcactg ctaaacggca cctggcggct acccatttcc ggtttgttcg gatggttcgg
    10981 catggtaacc atttcgcctt cgccctgata gttttcgata accagtttca ccggatcgat
    11041 aaccgccatt gcgcgcgggg cgttttcgtt gagatcttca cggatgcagg attccagcga
    11101 cgccatctca atggtgttgt cctgcctggt cacgccgatg cgtttgcaga actcacgaat
    11161 agaagcagca gtgtaaccac gacgacgcag accggaaatg gtcggcatac gcgggtcatc
    11221 ccagccttca acgtgcttgt cggtcaccag caggttcagc ttacgcttgg acatcacagt
    11281 gtattccaga ttcaggcgcg agaattcgta ctggcgcggg tgaacaggaa tggtgatgtt
    11341 gtccagcacc cagtcgtaca ggcgacggtt gtcctggaac tcaagcgtac acagagagtg
    11401 cgtaatacct tccagggcat cgctgatgca gtgggtgaag tcgtacatcg ggtagatgca
    11461 ccacttgttg ccagtctggt ggtgttcagc aaatttaatg cggtacagca ccggatcgcg
    11521 catcacgata aacggtgaag ccatgtcgat tttcgcacgc aggcaggctt taccttcttc
    11581 aaaaccaccg gcacgcattt tttcgaacag cgccaggttc tcttcaacgc tgcggtcgcg
    11641 gtacgggctg tttttacccg gttgcgtcag ggtgccgcgg tattcgcgga tctgttccgg
    11701 cgtcagttca tcaacgtacg ccaggccttt attgatcagt tcgatcgcat aggcgtggag
    11761 ctgatcaaaa taatcggagg agtaacggac gttaccagac cagtgaaaac ctaaccactc
    11821 tacgtcgttt ttgatcgact caacatactc gatatcttct tttaccgggt tagtgtcgtc
    11881 gaaacgcagg ttgcactggc ctttatagtc ctgggcgatc ccgaagttca ggcagataga
    11941 tttcgcatgg ccaatatgca gatagccatt cggctccggc gggaaacggg tgtgtactgt
    12001 ggtgtgctta ccactggcca gatcttcatc gatgatctga cggataaagt tagtcgggcg
    12061 ggcttctgcc tcactcatcg tggattcctc aaagcgtaaa caacgtataa cggcgtatga
    12121 tcttataagc ggaacaggct gacaactgtt agttttttaa aattgataat ctaacaagga
    12181 ttatggggat gattgatgaa aaaaaaagcg gcagagaaga tctccaccgc ttgtcattgt
    12241 tggatgcgac gctcaagcgt cgcatcaggc ataaagcaga ttactttttg atttcataca
    12301 gcggtgtttg acccgccaca acatggccct gagctttaat gatcaagcca ctgaaatcgt
    12361 cgatattgct gcaaaccacc gggctaatca tcgagcgggc gttagcgttc aggtaatcca
    12421 gatccatttc cagaatcggt tgccctgcgc ttacctgcgc accctcttcc accagacgtt
    12481 taaagccttt accttccagc gctacggtgt cgatacccat atggacgacg atctccgcgc
    12541 ctttttcggt ttccaggcag aacgcgtggt tggtgttgaa gattttcacg attgtccctg
    12601 cggctggtga tacgacgatt ttatctgtcg gtttcaccgc cacaccgtca cccaccgctt
    12661 tgctggcgaa tgcttcgtca ggaacctgat ccagtgccac gacatcaccg gtaatcggcg
    12721 ataccagctc cgcgatagat accgcgtttg gtacagcctg cggttttgct acaggcgcgg
    12781 cagttgacgg agttgcttca gctgacgcag cggctaccgg accacgggca acgactttct
    12841 tcatcgcatc gccgatggat tctgctttcg cgccaacaat cacctgaata gtctgtttgt
    12901 tcagtttcac tacaccagaa gcacccagac gtttacacat cgtatcgttg acgcgggcag
    12961 agtcagccac ggtcaggcgc agacgggtga tacaggcgtc aattgctttc aggttgtcag
    13021 tgccgccaac cgcagcaata tagttggtcg ccagttgatt gaggccttct tcagtgttgc
    13081 tgttggcttc ttcagtaacg atctcatctt ctttatcttc acgacccggc gttttcaggt
    13141 tgaacatgcg gataaccaaa ctgaacacca cgaagtagat agcgaagaag acaacaccca
    13201 tcaccagcag catccagacg ttctggctgg cggccggcag gttatacatc aacgcgtagt
    13261 cgatagcccc cgcagagaaa gagaagccag catggatacc cagcagtgtt gccacaaaca
    13321 ggctgatacc ggtcagcagt gcgtgcagga ggtacagcag cggtgcaagg aacatgaaca
    13381 ggaattccag cggctcagtc acaccggtca ggaacgcagt aacagcaaca gaaagcagca
    13441 tcccgccaac catcggacga cgctctttcg gtgctgcgaa gtacatcgcc agcgccgcac
    13501 ccggcagacc gaacatcata atcgggaaga agccggacat gaacatcccc gcggtgccgt
    13561 caccggcata gaagcggttg atatcaccgt ggaaaaccgt acccgccgcg ttggtgaatt
    13621 caccaatctg gaaccaggcg atggtgttca gcacctgatg cagaccggtt gggatcagca
    13681 gacggttgat gaaaccaaag ataccggaac ccagcgcgcc cgcagaaacg atccactcgc
    13741 ctcctgcatg gatagcgtgc tgtaccggcg gccagacgta accaaaaatg gccgccagca
    13801 ccaggcagaa gaagccggtg gcaatcggca caaagcgttt gccgccgaag aagctcagga
    13861 agtccggcag tttaatatcg gaccaacggt tataggctgc gccaccaacc agaccggtaa
    13921 tgatacccgc cagtacaccc atgtttattt ctgggttgat ggtcaccatc gctttggtta
    13981 acacaaagta acctaccgca cccgccagcg ccgccgcacc tgcgctgtct ttcgaccagc
    14041 tggatgccac accgatggcg aagattaatg cgaggttatc aaaaatcgca ccgcccgcct
    14101 gggcaataaa cgcaacgtta agtaaatctg gctgaccgaa tcgcagcaac agtgccgcca
    14161 ccggcagcac cgcgataggg agctgtaacg ccctaccgag tcgctggaaa aaacctaaaa
    14221 tattcatctt attcccccta cgagaaccct atttggctcg tttaaagccg tatttttatt
    14281 ttgctgcaaa ttgtactgcc gatgttctgt aatcagattg ttagatcatc tgctacagag
    14341 tgtgtgaaaa tttaattcgt atcgcaaatt aaacgcgtgt cttttgtgag ttttgtcacc
    14401 aaatatcgtt atcatcactc ccttttactg gctaaaccag aaaacttatt ttatcattca
    14461 aaaaatcagg tcggattgac gcctgtctgc gcaaatccaa gttacgctta aagatgccta
    14521 atccgccaac ggcttacatt ttacttattg aggtgaataa tgagactgat ccccctgact
    14581 accgctgaac aggtcggcaa atgggctgct cgccatatcg tcaatcgtat caatgcgttc
    14641 aaaccgactg ccgatcgtcc gtttgttctg ggcctgccaa ctggcggcac gccgatgacc
    14701 acctataaag cgttagtcga aatgcataaa gcaggccagg tcagctttaa gcacgttgtc
    14761 accttcaaca tggacgaata tgtcggtctg ccgaaagagc atccggaaag ctactacagc
    14821 tttatgcacc gtaatttctt cgatcacgtt gatattccag cagaaaacat caaccttctc
    14881 aacggcaacg ccccggatat cgacgccgaa tgccgccagt atgaagaaaa aatccgttct
    14941 tacggaaaaa ttcatctgtt tatgggcggt gtaggtaacg acggccatat tgcatttaac
    15001 gaaccggcgt cttctctggc ttctcgtact cgtatcaaaa ccctgactca tgacactcgc
    15061 gtcgcgaact ctcgtttctt tgataacgat gtcaatcagg tgccaaaata tgccctgact
    15121 gtcggtgttg gtacattgct ggatgccgaa gaagtgatga ttctggtgct gggtagccag
    15181 aaagcactgg cactgcaggc tgcagttgaa ggttgcgtga accacatgtg gaccatcagc
    15241 tgtctgcaac tgcatccaaa agcgatcatg gtgtgcgatg aaccttccac catggagctg
    15301 aaagttaaga ctttaagata tttcaatgaa ttagaagcag aaaatatcaa aggtctgtaa
    15361 ttgttatccc tgccctggct ccttgctcag ggcaatattt tttaaaatcg ggggtcagaa
    15421 tgtatgcatt aacccagggc cggatcttta ccggccacga atttcttgat gaccacgcgg
    15481 ttgttatcgc tgatggcctg attaaaagcg tctgtccggt agcggaactg ccgccagaga
    15541 tcgaacaacg ttcactgaac ggggccattc tctcccccgg ttttatcgat gtgcagttaa
    15601 acggctgcgg cggcgtacag tttaacgaca ccgctgaagc ggtcagcgtg gaaacgctgg
    15661 aaatcatgca gaaagccaat gagaaatcag gctgtactaa ctatctgccg acgcttatca
    15721 ccaccagcga tgagctgatg aaacagggcg tgcgcgttat gcgcgagtac ctggcaagac
    15781 atccgaatca ggcgttaggt ctgcatctgg aaggtccgtg gctgaatctg gtaaaaaaag
    15841 gcacccataa tccgaatttt gtgcgtaagc ctgatgccgc gctggtcgat ttcctgtgtg
    15901 aaaacgccga cgtcattacc aaagtgaccc tggcaccgga aatggttcct gcggaagtca
    15961 tcagcaaact ggcaaatgcc gggattgtgg tttctgccgg tcactccaac gcgacgttga
    16021 aagaagcgaa agccggtttc cgcgcgggga ttacctttgc cacccatctg tacaacgcga
    16081 tgccgtatat taccggtcgt gaaccgggcc tggcgggcgc gatcctcgac gaagctgaca
    16141 tttattgcgg tattatcgct gatggcctgc atgttgatta cgccaacatt cgtaacgcta
    16201 aacgccttaa aggcgacaaa ctgtgtctgg ttaccgacgc caccgcgcca gcaggtgcca
    16261 acattgaaca gttcattttt gcgggtaaaa caatatacta ccgtaacgga ctttgtgtgg
    16321 atgagaacgg tacgttaagc ggttcatcct taaccatgat tgaaggcgtg cgtaatctgg
    16381 tcgaacattg cggtatcgca ctggatgaag tgctgcgtat ggcgacgctc tatccggcgc
    16441 gtgcgattgg cgttgagaaa cgtctcggca cactcgccgc aggtaaagta gccaacctga
    16501 ccgcattcac acctgatttt aaaatcacca agaccatcgt taacggtaac gaggtcgtaa
    16561 ctcaataaga gaaagtatga caccaggcgg acaagctcag ataggtaatg ttgatctcgt
    16621 aaaacagctt aacagcgcgg cggtttatcg cctgattgac cagtacgggc caatctcgcg
    16681 gattcagatt gccgagcaaa gccagcttgc ccccgccagc gtaaccaaaa ttacgcgtca
    16741 gcttatcgaa cgcgggctga tcaaagaagt tgatcagcag gcctccaccg ggggccgccg
    16801 cgctatctcc atcgtcaccg aaacccgcaa tttccacgca atcggcgtac ggcttggtcg
    16861 tcacgacgcc accatcaccc tgtttgatct cagcagcaaa gtgctggcag aagaacatta
    16921 cccgctgccg gaacgtaccc agcaaacgct ggaacatgcc ctgttgaatg ccattgctca
    16981 gtttattgat agctaccagc gcaaactgcg cgagctgatc gcgatttcgg tgatcctgcc
    17041 agggcttgtt gacccggaca gcggcaaaat tcattacatg ccgcatattc aggtagaaaa
    17101 ctgggggctg gtagaagctc tggaagaacg ttttaaagtg acctgtttcg ttggtcacga
    17161 tatccgtagt ctggcgctgg cggagcacta cttcggtgca agtcaggatt gcgaagactc
    17221 cattctggtg cgtgtccatc gcggaaccgg ggccgggatt atctctaacg ggcgcatttt
    17281 tattggccgc aacggtaacg tcggtgaaat tggccatatt caggtcgaac cgctgggtga
    17341 acgctgccac tgcggcaact ttggctgcct ggaaactatc gccgccaacg ctgccattga
    17401 acaacgggtg ttgaatctgt taaagcaggg ctaccagagc cgcgtgccgc tggacgactg
    17461 caccatcaaa actatctgca aagccgcgaa caaaggcgat agtctggcgt cggaagtaat
    17521 tgagtatatc ggtcgtcatc tgggtaaaac catcgccatt gctatcaact tatttaatcc
    17581 gcaaaaaatt gttattgccg gtgaaatcac cgaagccgat aaagtgctgc tccctgctat
    17641 tgaaagctgc attaataccc aggcgctgaa ggcgtttcgc actaatctgc cggtggtacg
    17701 ttctgagctg gatcaccgct cggcaatcgg cgcttttgcg ctggtaaaac gcgccatgct
    17761 caacggtatt ttgctccagc atttgctgga aaattaatgt gcttttatag tggcgcttat
    17821 tgttgtcaat attctgggta gtccatgacc attaaaaatg taatttgcga tatcgacggc
    17881 gtgctgatgc acgataacgt cgccgtaccg ggtgcagcgg aatttttgca cgggattatg
    17941 gataaaggcc tgccgctggt gttgctgacc aactatcctt cgcagactgg gcaagatctg
    18001 gcgaaccgct ttgccaccgc aggtgtcgat gtacctgaca gcgtgtttta tacctctgcg
    18061 atggcgactg ccgatttcct gcgtcgccag gaaggcaaga aagcgtatgt ggtgggcgaa
    18121 ggcgcactga ttcatgaact gtacaaagcc ggtttcacta ttaccgatgt gaaccctgat
    18181 ttcgtgattg ttggcgaaac gagttcctac aactgggaca tgatgcataa agcagcctat
    18241 ttcgtcgcta acggtgcacg ttttatcgcc accaatccgg acacccacgg gcgcggtttt
    18301 tatcccgcgt gtggcgcgtt gtgtgcaggc atcgaaaaaa tctccgggcg taaaccgttc
    18361 tatgttggta aaccgagtcc gtggatcatc cgcgcggcat taaacaaaat gcaggcgcat
    18421 tcggaagaaa cggtgattgt cggcgataac ctgcgtaccg atattctggc gggcttccag
    18481 gcaggtctgg aaacgattct ggtgctttct ggtgtttcat cgctcgacga tatcgacagt
    18541 atgccgttcc gcccaagctg gatttacccg tcggtcgctg aaatcgacgt tatctgaata
    18601 gcaaccacgt ctgcggacgt ggttggctct gatgacaaac gccaaactgc ctgatgcgct
    18661 acgcttatca ggcctacgca gctcctgcaa tatattgaat tttcatgctt ttgtaggccg
    18721 gataaggcgt tcacgccgca tccggcatga acaaattgca ctttgtcagc aatttggccc
    18781 ccgtaaaata caaacattca ataaaacccg ctgaaaatta tcgattcatc aataaatata
    18841 tcctcacacc agaccttttt tcaccaatcg acaatcacca ttacgttttt tattttttca
    18901 ccgccaaatc gcttgcgcac agtgctgatt tgcggcattt ttttaaacaa gcaaacacaa
    18961 caagcaacaa ataccagatt aacggagaag gttatgtgtt caatttttgg cgtattcgat
    19021 atcaaaacag acgcagttga gctgcgtaag aaagcactcg agctgtcacg cctgatgcgt
    19081 catcgtggcc cggactggtc cggtatttat gccagcgata acgccattct cgctcacgaa
    19141 cgtctgtcaa ttgttgacgt taacgcgggg gcgcaacctc tctacaacca acaaaaaacc
    19201 cacgtactgg cggtaaacgg tgaaatctac aaccaccagg cattgcgcgc tgaatatggc
    19261 gatcgttatc agttccagac agggtctgac tgtgaagtga tcctcgcgct gtatcaggaa
    19321 aaagggccgg aatttctcga cgacttgcag ggcatgtttg cctttgccct gtacgacagc
    19381 gaaaaagatg cctacctgat tggtcgcgac catctgggga tcatcccact gtatatgggc
    19441 tatgacgaac acggtcagct gtatgtggcc tcagaaatga aatcgctggt gccagtttgc
    19501 cgcacgatta aagagttccc ggcggggagc tatttgtgga gccaggacgg cgaaatccgt
    19561 tcttattatc atcgcgactg gttcgacttt gatgcagtga aagataacgt gaccgacaaa
    19621 aacgagctgc gtcaggctct ggaagattcc gttaaaagcc atctgatgtc tgatgtgcct
    19681 tacggtgtgc tgctttctgg tggtctggat tcctcaatta tttccgctat caccaagaaa
    19741 tacgcagccc gtcgcgtgga agatcaggaa cgctctgaag cctggtggcc gcagttacac
    19801 tcctttgctg taggtctgcc gggttcaccg gatcttaaag cagcccagga agtggcaaac
    19861 catctgggca cggtgcatca cgaaattcac ttcactgtac aggaaggtct ggatgccatc
    19921 cgcgacgtga tttaccacat cgaaacttat gatgtgacca ctattcgcgc ttcaacaccg
    19981 atgtatttaa tgtcgcgtaa gatcaaggcg atgggcatta aaatggtgct gtccggtgaa
    20041 ggttctgatg aagtgtttgg cggttatctt tacttccata aagcgcccaa cgctaaagaa
    20101 ctgcatgaag agacggtgcg taaactgctg gccctgcata tgtatgactg cgcgcgcgcc
    20161 aacaaagcga tgtcagcctg gggcgtggaa gcacgcgttc cgttcctcga caaaaaattc
    20221 cttgatgtgg cgatgcgcat taacccgcag gataaaatgt gcggtaacgg caaaatggaa
    20281 aaacacatcc tgcgtgaatg ttttgagtca tacctgcccg caagcgtggc ctggcggcag
    20341 aaagagcagt tctccgatgg cgtcggttac agttggatcg acaccctgaa agaagtggcg
    20401 gcgcagcagg tttctaatca gcaactggaa actgcccgct tccgcttccc gtacaacacg
    20461 ccaacctcaa aagaagcgta tctgtaccgg gagatctttg aagaactgtt cccgcttccg
    20521 agcgccgctg agtgcgtgcc tggcggtcct tccgtcgcgt gttcttccgc taaagcgatc
    20581 gaatgggatg aagcgttcaa gaaaatggac gatccatctg gtcgtgcggt tggtgttcac
    20641 cagtcggcat ataagtaaga aatgcgaaac agccccggtg aaatccgggg ctgtttcagt
    20701 tattgaggtg cttgttgatt ctgatatgca gtaaggaaat gttccgggtt tgccacatca
    20761 ctgtttgaca actcatcact gtaggccagt atttcataga ttaatttccc accactattg
    20821 ttgaattccg aatttcatcc tgtacgacaa aagaatggct gtagggtggg gaaaaaacac
    20881 aaagtaaaca ataattgacg aatatagcgc cacgctgttc gcaacctaac caaatagtca
    20941 ctttcgagca attttccttg aaaaagaggt tgacgctgca aggctctata cgcataatgc
    21001 gccccgcaac gccgataagg tatcgcgaaa aaaaag
//
LOCUS       DADKRT010000062        20760 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.063, whole genome shotgun sequence.
ACCESSION   DADKRT010000062 DADKRT010000000
VERSION     DADKRT010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20760
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.063"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(17..562)
                     /gene="hemG"
                     /locus_tag="JQ356_001932"
     CDS             complement(17..562)
                     /gene="hemG"
                     /locus_tag="JQ356_001932"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HAY4622041.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKELGIQTDVANVHRIEEPQ
                     WENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTN
                     SYARKFLMSSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTD
                     WEQVANFAREIAQLTNKPTLK"
     gene            complement(574..2025)
                     /gene="trkH"
                     /locus_tag="JQ356_001933"
     CDS             complement(574..2025)
                     /gene="trkH"
                     /locus_tag="JQ356_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HAY4622042.1"
                     /translation="MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFF
                     VALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATI
                     AIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            complement(2064..2678)
                     /locus_tag="JQ356_001934"
     CDS             complement(2064..2678)
                     /locus_tag="JQ356_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HAY4622043.1"
                     /translation="MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRA
                     EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGIGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDG
                     KIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE"
     gene            complement(2678..4009)
                     /gene="pepQ"
                     /locus_tag="JQ356_001935"
     CDS             complement(2678..4009)
                     /gene="pepQ"
                     /locus_tag="JQ356_001935"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HAY4622044.1"
                     /translation="MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     DVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRS
                     FKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIV
                     ALNEHASVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKD
                     VNDEQLALIATMKAGVSYVDYHLQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIES
                     LLAPWREGQFSKHFNWQKIEALKPFSGIRIEDNVVIHENNVENMTRDLKLA"
     gene            4199..6388
                     /gene="fadB"
                     /locus_tag="JQ356_001936"
     CDS             4199..6388
                     /gene="fadB"
                     /locus_tag="JQ356_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001490315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
                     /protein_id="HAY4622045.1"
                     /translation="MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIG
                     VLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLP
                     VPTIAAVNGYALGDGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGA
                     DSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPK
                     LEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKS
                     FVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAW
                     KGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDR
                     VDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMH
                     FFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFA
                     GFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQK
                     DYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSE
                     EEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAK
                     YLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA"
     gene            6398..7561
                     /gene="fadA"
                     /locus_tag="JQ356_001937"
     CDS             6398..7561
                     /gene="fadA"
                     /locus_tag="JQ356_001937"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HAY4622046.1"
                     /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPA
                     LEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGI
                     SREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCN
                     PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV"
     gene            complement(7753..8454)
                     /gene="fre"
                     /locus_tag="JQ356_001938"
     CDS             complement(7753..8454)
                     /gene="fre"
                     /locus_tag="JQ356_001938"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HAY4622047.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDYQIVVDIPYGEAWLRDDE
                     ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLSELEALSLKHP
                     GLRVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSER
                     NAREDRLFGDAFAFI"
     gene            complement(8500..9993)
                     /gene="ubiD"
                     /locus_tag="JQ356_001939"
     CDS             complement(8500..9993)
                     /gene="ubiD"
                     /locus_tag="JQ356_001939"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HAY4622048.1"
                     /translation="MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGVPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGY
                     IEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA"
     gene            10160..10648
                     /gene="rfaH"
                     /locus_tag="JQ356_001940"
     CDS             10160..10648
                     /gene="rfaH"
                     /locus_tag="JQ356_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HAY4622049.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRT
                     AVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPK
                     DIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
                     KL"
     gene            complement(10645..11427)
                     /gene="tatD"
                     /locus_tag="JQ356_001941"
     CDS             complement(10645..11427)
                     /gene="tatD"
                     /locus_tag="JQ356_001941"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HAY4622050.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQ
                     AQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFST
                     PEEQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREE
                     MQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDFTPKPSS
                     RRNEPAHLHHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF"
     gene            complement(11469..12245)
                     /gene="tatC"
                     /locus_tag="JQ356_001942"
     CDS             complement(11469..12245)
                     /gene="tatC"
                     /locus_tag="JQ356_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HAY4622051.1"
                     /translation="MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHL
                     VSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE"
     gene            complement(12248..12763)
                     /gene="tatB"
                     /locus_tag="JQ356_001943"
     CDS             complement(12248..12763)
                     /gene="tatB"
                     /locus_tag="JQ356_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HAY4622052.1"
                     /translation="MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRSLRSLAT
                     TVQNELIQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPE
                     KASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKT
                     AAPSPSSSDKP"
     gene            complement(12767..13036)
                     /gene="tatA"
                     /locus_tag="JQ356_001944"
     CDS             complement(12767..13036)
                     /gene="tatA"
                     /locus_tag="JQ356_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HAY4622053.1"
                     /translation="MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV"
     gene            complement(13115..14755)
                     /gene="ubiB"
                     /locus_tag="JQ356_001945"
     CDS             complement(13115..14755)
                     /gene="ubiB"
                     /locus_tag="JQ356_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HAY4622054.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWM
                     PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDG
                     KLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFF
                     TQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAF
                     KEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGAT
                     LVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR"
     gene            complement(14752..15357)
                     /gene="ubiJ"
                     /locus_tag="JQ356_001946"
     CDS             complement(14752..15357)
                     /gene="ubiJ"
                     /locus_tag="JQ356_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HAY4622055.1"
                     /translation="MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGF
                     STSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEA
                     ITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK"
     gene            complement(15371..16126)
                     /gene="ubiE"
                     /locus_tag="JQ356_001947"
     CDS             complement(15371..16126)
                     /gene="ubiE"
                     /locus_tag="JQ356_001947"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HAY4622056.1"
                     /translation="MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            complement(16221..17648)
                     /gene="rmuC"
                     /locus_tag="JQ356_001948"
     CDS             complement(16221..17648)
                     /gene="rmuC"
                     /locus_tag="JQ356_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HAY4622057.1"
                     /translation="MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAE
                     LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR
                     QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF
                     GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG
                     LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR
                     ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE
                     ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI
                     GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY
                     RLRSVPEQLNDEAYQRDDEYNQQSR"
     gene            complement(17789..18550)
                     /gene="udp"
                     /locus_tag="JQ356_001949"
     CDS             complement(17789..18550)
                     /gene="udp"
                     /locus_tag="JQ356_001949"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HAY4622058.1"
                     /translation="MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKL
                     ASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSD
                     TFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESQAVKIVVEAARRLL"
     gene            18812..19624
                     /locus_tag="JQ356_001950"
     CDS             18812..19624
                     /locus_tag="JQ356_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY4622059.1"
                     /translation="MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPA
                     YHARPKQSDGPLPVVIVVQEIFGMHEHIRDICRRLALEGYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHN
                     PQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
                     LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS"
     gene            20018..20286
                     /gene="hcp"
                     /locus_tag="JQ356_001951"
                     /pseudo
     CDS             20018..20286
                     /gene="hcp"
                     /locus_tag="JQ356_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278763.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
     gene            20440..20760
                     /locus_tag="JQ356_001952"
                     /pseudo
     CDS             20440..20760
                     /locus_tag="JQ356_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356833.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT         5084 a         5604 c         5207 g         4865 t
ORIGIN      
        1 tttttattct ttatgcttat ttcagcgtcg gtttgttggt taactgggcg atttctcggg
       61 cgaaattcgc cacctgctcc caatcggtat agacaacttc tttgcgcgta tccgtttcac
      121 cgcctgacat cttcataatc agcttaatca taaaacggtc gtaccagcga taacgtgggt
      181 aacgcagcgc cccggcaatg accgcgcagc gatcgggacg ccattgtgaa ctcatcagaa
      241 acttgcgcgc gtagctgttg gtctgtggag tacgcttctc cggtttgcgc gccaccaggt
      301 ttacggaata aaaggcgctc ggcatcgaat tcagtcgcgt cgcatgtttt ttgacaaatt
      361 cctggaacgc agagtggtag tgaccatagc gaatagaagc accaatgacc acacggtcat
      421 agttttccca ttgtggttct tcaatgcggt gcacattggc gacatccgtc tggatcccca
      481 gttctttcag ttccgaagcc aggtaggagg caatctcgcg cgtttgtccg tcccttgttg
      541 agaaaagaat taatgttttc acgtattact ccatcattca cgccagaaag tcggggtaaa
      601 gagcaccagc aatgtaaaga cctcgagacg accaaacagc atgttggcaa tcaggatcca
      661 tttagccacc gggttcatac tggtaaagtt atcagcaacc acgccaagcc ctggccccag
      721 gttattcaat gtcgcaacaa ctgaggcaaa ggcagaaaaa tcatccacgc ccgtggcgat
      781 aatcgccagc atactgacaa taaacaccaa tgcataggcg gagaaaaatc cccaaacggc
      841 ttcgaggata cgttccggca gtgcgcgatt ccccagctta atgctataga cggcgttcgg
      901 atgcaccagt cgtttcagct cacggttccc ctgcttaaac agcagcagga tgcggatcac
      961 tttcaggcca ccgcccgttg acccggcgca accgccgata aaagctgaac ataaaagcag
     1021 taccggcaaa aagagcggcc agcgggcaat gctgtcagtc gtaaacccgg cggttgtcgc
     1081 catcgatacc acctggaaaa acgcctggtt aattgtcatc agcgccgaac tgtagacatt
     1141 atgaaaccac agtacgagtg tacaaataac caccagcgta aactgtacgc cgataaacat
     1201 gcgaaattcc ggatcgcgcc aataaacctt cagactacgc ccacttaaca gtgaaaagtg
     1261 cagaccgtag ttacaaccgg agatcagcag gaagatagca atgatagtgt taatagtcgg
     1321 actgtcgaaa taaccgatac tggcatcatg tgtcgagaag ccgccaatag cgatagtcgc
     1381 aaagctatgg ccgatggcat caaaggcatc cattccggca aaccacaacg ccagcgcaca
     1441 ggcgacggtc agcaagacat aaatcaacca cagggttttc gccgtttccg caattcgcgg
     1501 gcgcattttg ttatctttca gcgggccggg catttctgcg cgatagagct gcatcccacc
     1561 cacgccgagg ataggcagta tcgcaaccgc taacacgatg atccccatcc cgccaaacca
     1621 ttgcagcatc tggcgataaa agaggatggc atgagggagc gaatccagcc ccaccagcgt
     1681 agtggccccg gtggtggtca ggccagagaa agattcaaaa aacgcatcgg taatcgtgag
     1741 gttcgggctt tccgagaaga taaaagggag cgcaccgaca ctacccagca cggtccaaaa
     1801 cagcaccact atcagaaacc cctcacggga tttcagttcg cccttctctt tgcggttcgg
     1861 ccaccacagc atagagccaa tggcgagggc gacaaaaaag gtctgggtaa aagcgcggcc
     1921 cgctccatcc cggtagatga gtgctaccag cccagggata atcatggtcc ctgaaaataa
     1981 gatgaccagt agtccaacga ttcgggtaat ggcgcgaaaa tgcatctctg ccgcttcctt
     2041 agttctgcaa aatgaagtgg ggattattct tcaatcgcta acaattgcaa tgaaccacgg
     2101 ctaaaatccg ccagctttgc ggaaaattca gccactttcg ccgccggaag cgccacccgc
     2161 agcagaacga atgcctgata atcactgttg ataattttgc cgtcacactg ccccagcaac
     2221 gcttcaatgc cggttaactg actatattca cattgcaaag tatattcggt taatggcgtc
     2281 ttgcgttggg tcgttagctg gcgcagcgcc tgattcacgc cgccgccata cgctttcact
     2341 aacccaccgg tgccaagcaa tatgccgccg tagtagcgca ctaccacagc ggtaatttcc
     2401 ccgatgccgc tgcccattag ctgggcgagc atcggtttac ctgccgttcc cgccggctcc
     2461 ccgtcgtcag agaaacccag ctgttgagaa tcatccggcg cacccgccac ccacgccacg
     2521 caatggtggc gggcatcggg gtgttctgcc cgcaccgatt caacaaacgc tttcgccgcc
     2581 tcaacgccat cggtatgcgc caacatcgtt atgaagcggc tctttttgat ctcttcaacg
     2641 accgtgaccg gtgccgcagg aattaaccag ctttccatca cgccagtttc agatcccggg
     2701 tcatgttttc cacgttattt tcgtggatca ccacgttgtc ttcgatacga atgccgctga
     2761 acggtttcag tgcttcaatt ttctgccagt tgaagtgctt gctgaactgc ccttcacgcc
     2821 acggtgccag tagcgattcg atgaagtaga tacccggttc gatggttaac accatgcccg
     2881 gctggagaat acgggtgcag cgcaggtacg gatattttgc cggtgccgcg aggtgtgtac
     2941 cgctatcatc ctgcataaaa ccggctacgt catgcacctg caggcccagc ggatggccga
     3001 taccgtgcgg cataaacggt ccggtgagat cgttttcgac catcgcttct tcactcatat
     3061 cggtgatgat ttgatgttta cgcagcaatt tggcgatgcg ctgatggaac tggaggtggt
     3121 aatccacata gctgacgcca gctttcatgg tagcgatcag cgcaagttgt tcatcattta
     3181 cgtctttcac cagctgtgcg tagtcgttgt cgctttttgc cgaccaggta cgagtcaggt
     3241 cagccgcata gccgttatat tcggccccgg catccagcag gaagctgcgc atctcttccg
     3301 gtgcctgatg atccagtttg gtgtaatgca gcaccgaagc gtgttcgtta agcgccacaa
     3361 tgttgctgta aggtacgtcg gtatcacgat gaccggtcgc ggtcagatag gcgatgttga
     3421 tatcgaactc gctcatgcca gaacggaacg cttcttctgc cgcacgatga ccgttgaccg
     3481 ccattttctg cgcttcacgc atacaggcca gttcgtactc ggttttgaag gagcggtagt
     3541 aatgcaggta gtcgatcacc cctttcgggt tgatgttgct ggcctcaata cccagttgca
     3601 gcgcacgttc cggcaccgga ccgatataac cgatattgcc gcgcgcagcg ggcagcaggc
     3661 taccaatgcc atcggctttc ggcagtgcga tcacttccac atcttcagtc cagaaggagg
     3721 tcggcagcgg ttcgacgttg tgccagtaat caaccggcag atagaaccac agtttcggct
     3781 tgttcacgcc atccaccagc aaccagcagt ttggcacctg agttaccggc acccacgctt
     3841 tgaattgcgg gttcacttta aacggatagg gatgatcgtc gagaaaaacg ttgaacagct
     3901 cgccggagtg aataagtaat gcatccagct tgaagcgcgc cagcgcatcg cgagtccgtt
     3961 cttgtaaggt agctatatga tttttataga gcgaggccag tgattccatt ttttaccctt
     4021 ctgttttttt gaccttaagt ctccgcatct tagcacatcg ttcatccaga gcgtgatttc
     4081 tgccgagcgt gatcagatcg gcatttcttt aatcttttat ttacatgttt ttaacacaaa
     4141 atacacactt cgatgcatct ggtacgacca gatcaccttg cggattcagg agactgacat
     4201 gctttacaaa ggcgacaccc tgtaccttga ctggctggaa gatggcattg ccgaactggt
     4261 atttgatgcc ccaggttcag ttaataaact cgacactgcg accgtcgcca gcctcggcga
     4321 ggccatcggc gtgctggaac agcaatcaga tctaaaaggg ctgctgctgc gttcgaacaa
     4381 agcagccttt atcgtcggtg ctgatatcac cgaatttttg tccctgttcc tcgttcctga
     4441 agaacagtta agtcagtggc tgcactttgc caatagcgtg tttaatcgcc tggaagatct
     4501 gccggtgccg accattgctg ccgtcaacgg ctatgcgctg ggtgatggct gcgaatgcgt
     4561 gctggcgacc gattatcgtc tggcgacgcc ggatctgcgc atcggtctgc cggaaaccaa
     4621 actgggcatc atgccgggct ttggcggttc tgtacgtatg ccacgtatgc tgggcgctga
     4681 cagtgcgctg gaaatcattg ccgccggtaa agatgtcggc gcggatcagg cgctgaaaat
     4741 cggtctggtg gatggcgtag tcaaagcaga aaaactggtt gaaggcgcaa aggcggtttt
     4801 acgccaggcc attaacggcg acctcgactg gaaagcaaaa cgtcagccga agctggaacc
     4861 actaaaactg agcaagattg aagccaccat gagcttcact atcgctaaag ggatggtcgc
     4921 acaaacggcg gggaaacatt atccggcgcc catcaccgca gtaaaaacca ttgaagctgc
     4981 ggcccgtttt ggtcgtgaag aagcattaaa tctggaaaac aaaagctttg tcccgctggc
     5041 gcacaccaac gaagcccgcg cactggtcgg cattttcctt aacgatcaat atgtaaaagg
     5101 caaagcgaag aaactcacca aagacgttga aacaccgaaa caggccgctg tactgggcgc
     5161 aggcatcatg ggtggcggca ttgcttacca gtctgcgtgg aaaggcgtac cggttgtcat
     5221 gaaagatatc aacgacaagt cgttaaccct cggcatgacc gaagccgcga aactgctgaa
     5281 caagcagctt gaacgcggca agatcgatgg tctgaaactg gctggcgtga tctccacgat
     5341 ccacccaacg ctcgactacg ccgggtttga ccgcgtggat gttgtggtag aagcggttgt
     5401 cgaaaacccg aaagtgaaaa aagccgtact ggcagaaacc gaacaaaaag tacgcccgga
     5461 taccgtactg gcgtctaaca cttcaaccat tcctatcagc gaactggcca acgcgctgga
     5521 acgcccggaa aacttctgcg gaatgcactt ttttaacccg gtacaccgga tgccgttggt
     5581 agaaattatt cgcggcgaga aaagctccga cgaaaccatc gcgaaagttg tcgcctgggc
     5641 gagcaagatg ggcaagacgc cgattgtggt taacgactgc cccggcttct ttgttaaccg
     5701 cgtgctgttc ccgtatttcg ccggtttcag ccagctgctg cgcgacggcg cggatttccg
     5761 caagatcgac aaagtgatgg aaaaacagtt tggctggcct atgggtccgg catatctgct
     5821 ggatgtcgtg ggcattgata ccgcgcatca cgctcaggct gtcatggcag caggcttccc
     5881 gcagcggatg cagaaagatt accgcgatgc catcgacgcg ctgtttgatg ccaaccgctt
     5941 tggtcagaag aacggcctcg gtttctggcg ttataaagaa gacagcaaag gtaagccgaa
     6001 gaaagaagaa gacgccgccg ttgaagacct gctggcagaa gtgagccagc cgaagcgcga
     6061 tttcagcgaa gaagagatta tcgcccgcat gatgatcccg atggtcaacg aagtggtccg
     6121 ctgtctggaa gagggcatta tcgccactcc ggcggaagcg gatatggcgc tggtctacgg
     6181 cctgggcttc cctccgttcc acggcggcgc gttccgctgg ctggacaccc tcggtagcgc
     6241 aaaatacctc gatatggcac agcaatatca gcacctcggc ccgctgtatg aagtgccgga
     6301 aggtctgcgt aataaagcgc gtcataacga accgtactat cctccggttg agccagcccg
     6361 tccggttggc gacctgaaaa cggcttaagg agtcacaatg gaacaggttg tcattgtcga
     6421 tgcaattcgc accccgatgg gccgttcgaa gggcggtgct tttcgtaacg tgcgtgcaga
     6481 agatctctcc gctcatttaa tgcgtagcct gctggcgcgt aacccggcgc tggaagcggc
     6541 ggccctcgac gatatttact ggggttgtgt gcagcagacg ctggagcagg gttttaatat
     6601 cgcccgtaac gcggcgctgc tagcagaagt gccgcactct gtcccggcgg ttaccgtcaa
     6661 tcgcttgtgt ggttcatcca tgcaggcact gcatgacgca gcacgaatga tcatgactgg
     6721 cgatgcgcag gcatgtctgg ttggcggcgt ggagcatatg ggccatgtgc caatgagtca
     6781 cggcgtcgat tttcaccccg gcctgagccg caatgtcgcc aaagcggcgg gcatgatggg
     6841 cttaacggca gaaatgctgg cgcgtatgca cggtatcagc cgtgaaatgc aggatgcctt
     6901 tgccgcgcgg tcacacgccc gcgcctgggc cgccacgcag tcgggcgcat ttaaaaatga
     6961 aatcatcccg accggtggtc acgatgccga cggcgtcctg aagcagttta attacgacga
     7021 ggtgattcga ccggaaacca ccgtggaagc cctcgccacg ctgcgtccgg cgtttgatcc
     7081 agtaaacggt acggtaacgg cgggcacatc ttctgcactt tccgatggcg cagctgccat
     7141 gctggtgatg agtgaaagcc gcgcccatga attaggtctt aagccgcgcg ctcgtgtgcg
     7201 ttcgatggcg gtcgttggtt gtaacccatc gattatgggt tacggcccgg ttccggcctc
     7261 gaagctggcg ctgaaaaaag cggggctttc tgccagcgat atcggcgtgt ttgagatgaa
     7321 cgaagccttt gccgcgcaga tcctgccgtg cattaaagat ctcgggctaa tggagcagat
     7381 tgacgagaag atcaacctca atggtggtgc gatcgcgctg ggtcatccgc tgggctgttc
     7441 cggtgcgcgt atcagcacca cgctgctgaa tctgatggaa cgcaaagacg ttcagtttgg
     7501 tctggcgacg atgtgtatcg gtctgggtca gggtattgcg acggtgtttg agcgggttta
     7561 accacttgcc ggatgcggcg tgaacgcctt atccggtcta ccgatcctgc accaatgtag
     7621 gcctgataag acgcgccagc gtcgcatcag gcatcgtgca ccgattgccg gatgcgacat
     7681 agatctaaat gccactgaat aaagttttag ttgccgttct tcccgcctgt caggggcggg
     7741 tttttttata tctcagataa atgcaaacgc atcgccaaac agacgatctt cccgcgcatt
     7801 acgctcactg caaaacaggt cacgagcaat tttcgccatc tcaaaacgtc cggcaatata
     7861 gatatcatgc tctgccagcg taccatgatc ctgcaagacc gccgttaaca cggtgccagt
     7921 acgcccacgc cagcccgctt ccggttgttc aaccaccggc accacacgca ggccaggatg
     7981 cttcagcgaa agcgcctcaa gctcggagag atcataaaga tgttgctcct cacgcccacc
     8041 ccagtaaatg gtgatatcgc gattgggatt acgcgccaac gccgtcaata aaatcgagcg
     8101 cgcataggag aacccggtgc cgcccgcaat caaaatcatc ggacgctctt catcatcgcg
     8161 cagccacgct tctccgtagg gaatatcgac cacgatttga taatctttga ggatgcggtc
     8221 catgactgct ttcgcgtaaa ggttgatttc agaagcgcca atatgcagct ctataaaccc
     8281 tttttcatcc ggcgtcgaag ccattgaaaa cggacgtttg tcgcgctcat ccatcactac
     8341 catcaaatac tgaccagcac gaaaagaaaa ggccgcgtct ggcacgatgc ggacacgata
     8401 tacggtatcc gtgatagctt ctaccgaggt cactttacag cttaaggttg tcatgcgctt
     8461 tctctgtcgg atcgataaat agggcaaaac aaacgcgcat caggcgcttt taccgttgtt
     8521 aaaaatagcc agttcatccc agatggcgtc aatatgcgcg acaacatctg gatctttttt
     8581 gatgggacgt ccccattcac gctgggtttc ccccggccat ttattcgtgg catccagccc
     8641 catttttgaa cccagcccgg agacaggcga ggcaaaatcc agataatcaa taggcgtatt
     8701 ttctaccaga acagtatccc gcgccgggtc catacgggtg gtaatcgccc aaatcacatc
     8761 gttccagtcg cgtgcgttga cgtcatcatc gcaaacgatc acaaatttag tgtacataaa
     8821 ctggcgtaag aacgaccaga cgcccatcat gacgcgcttc gcgtgtccgg cgtactgttt
     8881 tttgatcgtc actaccgcca gacgataaga acagccttcc ggcggcaggt aaaaatcgac
     8941 aatttccggg aactgttttt gcagaatcgg tacaaacact tcgttcaacg ccacgcccag
     9001 taccgcgggc tcatctggcg gacgcccggt ataggtggaa tggtaaatcg catcttcacg
     9061 ctgggtaata tgcgtcacgg taaataccgg gaaactatcg acttcgttat agtaaccggt
     9121 gtggtcgcca tacggccctt ccggcgcagt ttcgccttgt tcgatatacc cttccagcac
     9181 aatctccgca ctggcgggca cttcaaggtc attggagata cacttcacca cttcggtctt
     9241 ggtaccgcgc agcaatccgg caaacgcata ctctgaaagt gtatccggaa cgggggtgac
     9301 tgcaccgaga atcgtggcgg gatcggcacc cagcgccaca gaaaccggga aacgttcgcc
     9361 cggatgcgcc gcacaccact cctgataatc cagcgcgccg ccgcgatgcg acagccagcg
     9421 cataatcagt ttgtttttac caatcagctg ctggcgataa atgcccagat tctgccgctc
     9481 tttatgcggg ccgcgcgtca ctgtcagccc ccaggtaatc agcggtgcgg catcttccgg
     9541 ccagcaggtc ataatgggaa tgcgattgag atcgacgtca tcgccagaga cgattttttg
     9601 ttggcagggc acaccacgca gccgctttgt cggcatgttc aatacttgct taaactgcgg
     9661 cagtttatca aacaggtcgc ggaaaccttt tggcggctcc ggctctttca gaaacgccaa
     9721 taatttacca acttcacgca gcgccgaaac atcttcctgt cccatcccca tcgccacgcg
     9781 ctttggcgta ccgaacaggt tgcacagcac cggcattgag tagcctttag ggttttcgaa
     9841 caacagcgca ggcccaccgg cacgcaaagt gcggtcagca atttcagtga tttccagatg
     9901 cggatccacc gggagcgtga tacgttttag ctcaccctgc tgttcaagca gcgtcaagaa
     9961 gtcgcgtaaa tcgttatatt tcatggcgtc cattgtagcc tcttaatcta cgcccattat
    10021 acggcgttca tctttgcgat gctgtaaatt tgttaaatta gcgtgaactc tgacggtata
    10081 acgcaaaccg gggaatataa ttaacttagc gtaaagcttt tgctatcctt gcgccccgat
    10141 taaacggata agagtcatta tgcaatcctg gtatttactg tactgcaagc gcgggcaact
    10201 tcaacgtgcc caggaacacc tcgaaagaca ggctgtgaat tgcctggcac cgatgatcac
    10261 cctggaaaaa atcgtgcgtg gaaaacgtac tgcagtcagt gagccattgt ttcccaacta
    10321 cctgtttgtc gaatttgatc cagaagtgat tcataccacg actatcaacg cgacccgcgg
    10381 tgtcagccac ttcgtgcgct ttggcgcgtc gccagcgata gtcccatcgg cggtgattca
    10441 tcagctatcg gtatataaac cgaaagacat tgtcgatccg gcaacacctt atccgggtga
    10501 taaggtgatt attaccgaag gcgcgttcga aggctttcag gccattttca ccgaacccga
    10561 tggtgaggct cgttccatgc tattgcttaa tcttattaat aaagagatta agcacagtgt
    10621 gaagaacacc gagttccgca aactctaaaa cgcaatccca aacagtgttt tgacattggc
    10681 atccgtggtg gcagccagcc atgcggcatc ttctccacgc cagtgcgcaa tacgttgcaa
    10741 aatatggtgc agatgggctg gctcgttgcg ccgggatgat ggctttggcg tgaaatcgcg
    10801 cgggagcaga tacggcgcat cagtttcgat cagcaatttc tccgccggaa tcaacggcaa
    10861 caattcccgc agctccagcc cgcgtcgttc atcgcaaacc caaccggtaa tgccgatata
    10921 aattccacgc gccacgcacg cctgcatctc ttcgcgtgtg ccggtaaagc aatgaagaac
    10981 cgcaccaggc agtttatcca gccacggctc cagcaatgtc ataaaccgct cgtgggcatc
    11041 gcgacagtgc ataaataccg gcatgtttaa ttctgcggca atgcgtagct gagcaacaaa
    11101 agcgcgttcc tgctcttccg gcgtcgaaaa gttgcggtta aagtcgagac cacattcacc
    11161 aatcgccacc acttctggct gcgcggccag ctcaataatc gcttcttcag tcgcagcttg
    11221 ccactggctg ctgtcgtgag gatgtacgcc cgccgttgac caacaggacg aatactgacg
    11281 cgccagcttt tgcgcctgct ggctttcacg caggttagtg ccggtgatga gtagcccatt
    11341 aactcccgcg tcaaaagcgc gcgctacaac atcatcacgg tctttcgcaa attgcgaact
    11401 ggtcaaatta acgccgatat caaacatcct gtactccata tgacaaccgc cctgacgggc
    11461 ggttgaattt attcttcagt tttttcgctt tctgcttcag cgtcgttttc ctcttcccga
    11521 tttcgccctt taccaacgta aaagcgtgag aagaagacac cgatttcaaa cagacagtac
    11581 atcgggatcg ccaatagcgt ttgcgagaag acatccggcg gcgtcagcaa catcccgaca
    11641 acgaatgcac caaccagcac atacgggcgt tttttgcgta agtcttctgg cgaggtaatc
    11701 cccatccagc acagcagcac aattgccacc ggcacttcaa aggagacacc aaacgccata
    11761 aacagcgcca taacgaagct taaatagctg gcgatgtcgg tggatacctg caccccttcc
    11821 ggcgcggtat tggcaaggaa gccaaatgcc agcggaaaga ccacaaagta ggcgaatgcc
    11881 atgccgatat aaaacagcag agagctggaa accagcagcg gcaccaccag gcgacgttca
    11941 tgcttataca gcgctggggc gataaatgcc cacacctgat agagaatcac cggcgctgac
    12001 agaatcagcg acaccataaa ggtcagcttg atcggcgtaa agaacggcga ggccacgtcg
    12061 gtggcgatca tcgttgaacc ttgcggcaac tgcttgatca atggcgcgga taccaggtga
    12121 tagatgtcat tggcgaaata gaccagacac aggaatatca cgatcaccgc gataatgcag
    12181 ttcagcagac gcttacgcag ctcaattaga tgcgtgataa gcggttgagt atcttctaca
    12241 gacatgttta cggtttatca ctcgacgaag gggaaggtgc agcggttttc ggttcagcgt
    12301 ccgcagcagg ttttaccacc ggctctggcg tggtttctgg cttctgttcc ggcgaactgg
    12361 cctgcgtttg tgcagcggca ggcgttacgc cctcatgcgc agcttcatta tctttcacca
    12421 ccgggttatg gatggtgtgc gcttcatcgc tcgccttttc tggatcgttt gcaacgtagg
    12481 aacgcttcat cgactccgcg gcctggcgta gttcatccat cgacgctttc agttcgggcg
    12541 tcaggttagt gaggctcgcc ttttcaacct ttttcagact gtcctgaaac tcctggagtt
    12601 ttaactcctg gatcagttcg ttctgcaccg ttgtcgccag tgaacgcaac gagcgaatcc
    12661 agcccgctac cgtttttacc gccacaggca gtcgttgcgg ccccagaacg acgaggccga
    12721 tgatgaacac caatagcagt tcgctaaaac cgatatcaaa cacggattac acctgctctt
    12781 tatcgtggcg cttcgcgtct tctgttttag cctgttcctg attcgtatcc gcctgcttat
    12841 cggcgatagt tttcgcagta aaatcagcat cctgactggt tttatcctgc tttggttcat
    12901 catcgctcat tgctttttta aagcctttga tcgacgcacc aagatcggaa ccgatggagc
    12961 cgagcttttt ggtgccaaaa agcagtacaa cgatgacggc aataatcaat aactgccaaa
    13021 tactgatacc acccatacat gttcctctgt ggtagatgat gattaaacaa agccgcatta
    13081 tacgttacac ggcccgcctt gagcgatgaa aaaatcagcg tgttttgcgc caaccgacaa
    13141 accaggcgat cagaccacct gccattaacc agccgggcat cagcccccac tcaggtcggc
    13201 tgaccaacaa gaatgtgcca cttaatacta acgtagcgcc aattccgaga aaataacgcg
    13261 attgtccctg acgtacatga tttgactgaa gctcgcgggc aatcttatca acactgtgct
    13321 gtaaatactt gccctggcgc aaactgtcgt aaaccaattc aggcagttct ggcatttttt
    13381 cgacccagaa cggcgctttt tctttaaatg ctctcaccag cgcaggaata ccgacctgat
    13441 ctttaatcca cgactccagg aaaggcttcg ctgttttcca taaatcgagc tgcggataaa
    13501 gctggcgtcc taccccttcg acatagagca gggttttctg gagtaacacc agttgcggct
    13561 gcacttccat attgaagcga cgcgccgtat taaacagatt taacagtaca tgtccaaacg
    13621 aaatttcggc cagcggtttc tcaaagatag gttcacagac cgtacgaatg gcaaattcga
    13681 actcttcaac gttggtatct ggtggcaccc agcctgaatc gacgtgtagc tctgccactt
    13741 tgcgatagtc gcgattaaag aaggcgataa agttttctgc cagatagcgt ttatcttctt
    13801 tgtttagcga gccaacaatc ccgcaatcaa tgccgatata tttcgggttt tccgggtgtt
    13861 catagcttac gaagatgttg ccagggtgca tatcggcatg gaaaaagctg tcgcgaaaga
    13921 cctgagtgaa gaacacctgc acgccgcgtt ccgccagcaa tttcatgtta gtgccgtttt
    13981 tctccagcgc cgcaacatca gacaccggaa tgccgtaaat gcgctccatc accatcatcc
    14041 cttcactaca atagtcaggg taaacttccg ggatgtagag catcgggctg tcttcaaaat
    14101 tgcgccgaag ctgaatggcg ttggcagatt cccgcagcaa attcagttca tcaatcaagg
    14161 tcttttcgta ctcgcgcacc acttcggttg ggcgcagacg gcgaccatcc ggcagcaaac
    14221 gcggcaccca gcgagccaga cggtagataa gtttcagatc cgctttaatg accggcaaaa
    14281 tatccgggcg gatgacttta atcaccacct ctttaccatt cgatttcaat cgcgcggtat
    14341 gaacctgggc gatagaagca gaagccagcg gcttgatttc aaaatcgtca aaccacgctt
    14401 ctaccggcaa gccgcccatt gcagcttcaa tctgctgctt cgccagcttg ccatcaaacg
    14461 gagctacttt gtcctgcaat aacgccagct gatcggcaat atgcggtgga aaaagatcgc
    14521 ggcgggttga taacatttgc ccgaacttga tccaaaccgg ccccagttct tgcagggcca
    14581 gtcgtagtcg ctcacctaaa agtttgtctt tatgccgatt tggcatccag aataatgagt
    14641 atcgccatag ccgtagcggc agggtgatac gcattttggg gatcagttca tcaagtccgt
    14701 agcttaaaaa agtgcgaatg atgaaatata ggcgccgtac ttcacctggc gtcatttagc
    14761 ctccagtttt tccagccgtt tggtcagggc atcaacagca cgctcgacgg cagccgtctc
    14821 ttccgcaaac caggccactt caagcggacc gggtgccata cgccactctt cagtaatggc
    14881 ttccgccaca taacgttgct ggcgcttaat gccgtgatgc aggaactttg cgcctccgcg
    14941 catggctttg ctgattcctt cagcggcgat atcaccggta taaggggcca gcagttccgc
    15001 agggtcgaac tctgccagat ctgccagcgc aacgaagttt tgcaccacct gaatatcgcc
    15061 ctgcacttcc agctcaccac tgcgaatcag tgcggtaagc tgctggcgat cgcgaagttt
    15121 cggcaacaca ctggcgtagg cgataacggt gcagtcagca tcgcctgccc attcgcccag
    15181 tacatcaacc tggcgttcgc tgaacaccag aatcaatgac gtcgaaaagc cttttacctc
    15241 cacgcgcaat actttaccca gcagacgcga gcgggctgtt ttcagcgcgg gtgagcgata
    15301 caggaaggtg ttgagcagac tttcaattcc tgccgtcact aaaggtttaa aaggcatttc
    15361 cggtctcctg tcagaactta taaccacgat gcagcgccac aacccctgcc gtcagattgt
    15421 agtagtcgac actttcgaat ccggcatcct gcatcatggc tttcagggta tcctgatcgg
    15481 gatgcatacg gatggattct gccagataac ggtagctgtc ggcgtcgttc gcgaccagtg
    15541 agccaatacg cggcagcaca tggaaggagt atgcatcata ggctttgctc agcggctcga
    15601 taattggctt cgagaactca agcaccagca ggcggccgcc gggtttcagc acgcgataca
    15661 ttgaacgcag tgctttatct ttgtcggtga cgttacgcag accaaacgaa atggtgatgc
    15721 aatcaaaggt gttatccggg aacggcagcg cctcagcgtt cgcctgaaca tactcaacgt
    15781 tgccaatcac accgatatta cgcagcttct cgcgtcccat tttgagcatg gattcattga
    15841 tatcagcaag gaccactttg ccagtttctc cgaccaggcg ggagaatttc gctgtcaggt
    15901 cgccggtgcc accagccaga tccagcacgg tctgcccacg gcgtacgccg ctgcaatcaa
    15961 tcgtgaatcg cttccacaaa cgatgaatac caaatgacat caaatcattc atgacatcgt
    16021 attttgatgc cacggaatgg aaaacgtggg cgaccatatc cgctttttgt tccttcgcga
    16081 cggtctgaaa accaaagtgc gtcgtttctt gtgacttatc caccatctca atgcctgctc
    16141 atcaaaaaat tgttccagaa gtgtaacaga ttgggcgtcg atgccctaga tttctacccg
    16201 gcttaactac ccctaatggg ctagcgcgac tgctgattat attcatcatc gcgttgataa
    16261 gcttcatcat tcagctgctc cggaaccgac cgaagtcgat actcttcatc ctggctcacc
    16321 gcctgttcag ccaaatccgg attaatctcg cgtttaattt ctactcctaa accgcgaaac
    16381 gcttctgcct gcgccagcac atttccgcga cctgaagaga gttttttcat tgcctggcgg
    16441 tagttatcct gcgctttgtc gagactttga ccaatcgcgg acatgtcatc gatgaacaaa
    16501 cgcatcttgt cgtacagctt gctggcacga tcggcgattt gctgggcgtt gcggctttga
    16561 tgctcataac gccacaggtt ggcaatagta cgcaacgcca ccagcagcgt agtcgggcta
    16621 accagcatga tattgttttt caacgcttcg gtgatcagct ccggctggcg gtcaagcgcc
    16681 agtaaaaaag cgggttcaac gggaataaac atcagcacgt aatccagagt tcgcagcccc
    16741 ggcagctgtt gataatcttt gcgtcccagc aaacggatat ggttacgcac cgacgcgata
    16801 tgttcctgta gcgcgctttc gcgggtgtag tcgtcttcgg cgttaaaata gcgttcatag
    16861 gcgaccagcg tcattttggc gtcgatcacc acatcttttc cctgcggcag ccgcacgatg
    16921 acatccggct gcatccgcga gcgggcgtca ttttcgatgc tgacctgggt ttcatattca
    16981 tacccttcac gcagaccgga agcctccagc acccgcgtca atactacctc gccccagttg
    17041 ccctgggttt tattgtcgcc tttcagcgcg cgcgtcaggt tgatcgcttc ctgggccatt
    17101 tgcgcgttga gttgctggag attgcgaatt tcgtgggtca gggtatggcg ttcttgtgct
    17161 tctttaccga agctgtcctg aacctgacgg cggaaaccgt ccagttgttc acgtagcggc
    17221 gacaacaggc tgttcagact ctgacggttt tgctcatcaa cccggcgatt gctgtgctca
    17281 aaaatacggt tggcgaggtt ttcaaactgc tcactgaggc gctgctcgct gttaatcatc
    17341 tggcgaattt tatcgtcagc atgttgctgt gcggcttcca tccgcgtggt tacttcacgc
    17401 agatcggcct ccagagaggt gttaatactt tgcaggctgc gcacttcgtt attgagtaac
    17461 tcgcactctg cacgccagtg ctcgctttgg gtaatttgtt gttttgccgc gcttaactcc
    17521 gcgaccatct cttcacgttc agctaattgc tcggcttttt gctgcgcatg ttgataactg
    17581 gcaaacagcc agccaattgc cacacccacc aacgcaataa ctgcgtaaac catgattgag
    17641 aaatccacaa cgcctcctga cgcaacaact tacccgcaca aaatagaatt gtgctgtaca
    17701 aacgtccagt tggaaaggca tttcctgcga ggcgctacgc aaaaatacaa aaggccgaac
    17761 gcgtcggcct tcagacagga gaagagaatt acagcagacg acgcgccgct tccaccacga
    17821 ttttcaccgc ttggctttca gtttgtttca tcgtctcagc attcgggatc tcttgctggg
    17881 tgcggttaac gataacaccc gctaccatac cggcacgcag gccctgactt gcacacatgg
    17941 tcagcagggt tgcagattcc atttcatagt tcattacgcc catcgcctgc cactcttcca
    18001 tagaaccttt aaagtgacga actacgcgac cagagtaagt atcgtaacgt tcctggcctg
    18061 ggtagaaggt atcagaagaa gctgtcacgc caacgtgagt tgtcgcgcca atggatttcg
    18121 cagcttcaac cagcgcagtc gtacattcga aatcagcgac agccgggaat tccagcggtg
    18181 cgaagtgcag gctcgcgcca tccagacgga cagacgccgt ggtaaccagg acatcaccca
    18241 cattaatatg cggctgaata gcgcccgttg taccgatacg caggaaggtg cgaatgccca
    18301 gctgtgccag ctcttcaaca gcaatagagg tagacgggcc gccgataccg gtagagcaga
    18361 cgataacagg tttaccatcc agctctgcac gccaggtggt gaattcgcgg tgagatgcca
    18421 gcttaaccgg cttatccatc agcgcggcga tcttttccac acgatccggg tcgccaggga
    18481 cgatggcaag cgtagcccct tgtaaatcgt ttttagtgag gccgagatga aaaacatcag
    18541 acttggacat atacaactcc tctgtgaatc ggtttagtca gaagaagcaa aaagacactt
    18601 taccgaaggg tttaacattt tttcgtgata ctcatcacca tgacgcaaat gcgttgcata
    18661 aatttaccca ccaaaagtga tgcaaatcac ataaatcact cttcattctg caggactgca
    18721 taaaagatga gccgattcag gcaatgtgat ttgttgcatg ctgactatag ttaacattgc
    18781 gcaacatttt tataagggta cggagaatac catggcaaca acacaacaat ctggatttgc
    18841 acctgctgca tcgcctctcg cttcgaccat cgttcagacc ccggacgacg cgattgtggc
    18901 gggcttcacc tctatccctt cacaagggga taacatgcct gcttaccatg ccagaccaaa
    18961 gcaaagcgat ggcccactgc cagtggtcat tgtagtgcag gaaatttttg gcatgcatga
    19021 acatatccgc gacatttgtc gccgtctggc gctggagggg tatctggcta tcgcacctga
    19081 actttacttc cgcgaaggcg atccgaatga ttttgccgat atccccacgt tgcttagcgg
    19141 tctggtagca aaagtgcctg actcgcaggt gctggccgat ctcgatcatg tcgccagttg
    19201 ggcttcccgc aacggcggcg atgttcatcg tttaatgatc accggattct gctggggtgg
    19261 acgtatcacc tggctgtatg ccgcgcataa tccacagcta aaagccgcag tggcgtggta
    19321 cggcaaactg acgggcgaca agtcgctaaa ttcaccgaaa caacctgttg atatcgcaac
    19381 cgatcttaac gcgccggttc tcggcttata tggtggtcag gataacagca ttccgcagga
    19441 gagcgttgaa accatgcgcc aggcgctgcg ggctgctaat gcgaaagcag agattatcgt
    19501 gtacccggac gccgggcatg cattcaacgc tgattatcgc ccgagctatc atgccgaatc
    19561 tgcgaaagat ggctggcagc gtatgctgga atggtttaag cagtatggtg ggaagcggag
    19621 ttagtttcct cttagtctat atttgagatg gtgagtgaac gagtgcgttt tgctgccatc
    19681 tctgtccccc aaaaaataat cagtatgaat tgattggaga ttacgactcc gctatttgac
    19741 cttaagaaag tcggcaagtc atagtcataa atgagtctct tcaatggaag acaccttaga
    19801 gatttaccat ctactcccat tcacaaacaa acattaatta ttatcaacac attcacatta
    19861 attataaatc atctcagacc ttcctgataa aaagatatta aagtgaaaca ttttgttttt
    19921 cacattttag ttcatcactt ttaggcgtaa ataaaggtaa aaaaaacaac aatactattt
    19981 ctctttcaca aaagaattaa caaaaggttt tttaaggatg agtgatatta tttacttgac
    20041 cataaccgga gaacaacaag gatgtatttc ctctctttgt ggaacgagcg catcaatagg
    20101 taatcgctgg cagattggcc atgaagatga aatcttcgcg ttctcgctct ctaatagtat
    20161 tacgaatgca ggcaaagggt cacaattgca tggccttagt ttctgtaaat tcttattaac
    20221 gctattaaca ataacgagca gttgttcatg gcgtttgact tctatcggat caatagattt
    20281 ggtcgatggg agaaatatta caacattcaa ctccgcggcg cgctcttatc agcaatcaat
    20341 cacctgttta ctgagaacaa tctggataca gaagccatca ctgtcagtta tgaatatata
    20401 ctctccaggc atctgattgc taatactgaa tttagttatt tggcatttcc cgataactac
    20461 aaccgtctgt ttataccacg gccaaaaact aaagctggta atggttcaaa acacttaata
    20521 gtaaagcggt tggcagactg cttgctgctg gcggcatata caatgggaat atcgaaggat
    20581 tcagggaaac agcagacaag ttggggggag atgcacctgc tggttacgat caatttatgg
    20641 ataacaaagg gttactcatc gctggtgctt caatagttgc tggagcagtt ctggggagaa
    20701 tgagactccc tgatttggaa tcacttgagc atttcggagc cagaggagca gtatcaggaa
//
LOCUS       DADKRT010000063        20759 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.064, whole genome shotgun sequence.
ACCESSION   DADKRT010000063 DADKRT010000000
VERSION     DADKRT010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20759
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.064"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..224)
                     /gene="hyfA"
                     /locus_tag="JQ356_001953"
     CDS             complement(<1..224)
                     /gene="hyfA"
                     /locus_tag="JQ356_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HAY4622060.1"
                     /translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST
                     ITAPVVCHHCEEAPCLQVCPVNAISQRDDA"
     gene            complement(477..947)
                     /gene="bcp"
                     /locus_tag="JQ356_001954"
     CDS             complement(477..947)
                     /gene="bcp"
                     /locus_tag="JQ356_001954"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HAY4622061.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
     gene            complement(947..1519)
                     /locus_tag="JQ356_001955"
     CDS             complement(947..1519)
                     /locus_tag="JQ356_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HAY4622062.1"
                     /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
                     ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            1665..2543
                     /gene="dapA"
                     /locus_tag="JQ356_001956"
     CDS             1665..2543
                     /gene="dapA"
                     /locus_tag="JQ356_001956"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HAY4622063.1"
                     /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
                     TGESATLNHDEHADVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
                     KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
                     KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
                     SGRETVRAALKHAGLL"
     gene            2560..3594
                     /gene="bamC"
                     /locus_tag="JQ356_001957"
     CDS             2560..3594
                     /gene="bamC"
                     /locus_tag="JQ356_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708316.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HAY4622064.1"
                     /translation="MAYSVQKSRQAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEA
                     APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGVRTQFTGD
                     TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAAN
                     AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
                     AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFSK"
     gene            3807..4520
                     /gene="purC"
                     /locus_tag="JQ356_001958"
     CDS             3807..4520
                     /gene="purC"
                     /locus_tag="JQ356_001958"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HAY4622065.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
                     KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
                     VLKKRFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
                     GGLIEAYEAVARRLGVQLD"
     gene            4688..5551
                     /locus_tag="JQ356_001959"
     CDS             4688..5551
                     /locus_tag="JQ356_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HAY4622066.1"
                     /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
                     LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG
                     KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQ
                     QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
                     PAQCNTFGKSI"
     gene            5566..7581
                     /locus_tag="JQ356_001960"
     CDS             5566..7581
                     /locus_tag="JQ356_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HAY4622067.1"
                     /translation="MAELTALYTLTAQMKREGIRRLLVLSGEEGWCFDHALKLRDALL
                     GDWLWISPQPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
                     VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNDAILWRQNQPFSL
                     AHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPGVAAVTAARGRGKSALAGQLISRIAG
                     SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
                     SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
                     VFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
                     GQYFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGSNPLA
                     ATLRGRRVSRIAVHPARQREGVGQQLIASALQYTQDLDYLSVSFGYTGELWRFWQRCG
                     FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVD
                     PLNDIVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ
                     LCTTLKLAGRKMLLVRQREEAAHALFALNDVRTERLRDRITQWQFFH"
     gene            7655..8353
                     /gene="ypfH"
                     /locus_tag="JQ356_001961"
     CDS             7655..8353
                     /gene="ypfH"
                     /locus_tag="JQ356_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311362.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY4622068.1"
                     /translation="MKHDHFVVQSPDKPVQQLLLLFLGVGDNSVAMGEIGSWFAPLFP
                     DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA
                     NATALIGFSQGAIMALESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP
                     VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEAL
                     SGGKPGDDDVIEMM"
     gene            complement(8463..8663)
                     /locus_tag="JQ356_001962"
     CDS             complement(8463..8663)
                     /locus_tag="JQ356_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HAY4622069.1"
                     /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP
                     HRDFNDKWDDDDDWPKKDQPKK"
     gene            complement(8691..9818)
                     /gene="dapE"
                     /locus_tag="JQ356_001963"
     CDS             complement(8691..9818)
                     /gene="dapE"
                     /locus_tag="JQ356_001963"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HAY4622070.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD
                     FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
                     GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
     gene            complement(9822..10178)
                     /locus_tag="JQ356_001964"
     CDS             complement(9822..10178)
                     /locus_tag="JQ356_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HAY4622071.1"
                     /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
                     FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPSIIKRPLLCAPGKPM
                     LLGFSDSSYQQFFHEV"
     gene            10559..10618
                     /gene="ypfM"
                     /locus_tag="JQ356_001965"
     CDS             10559..10618
                     /gene="ypfM"
                     /locus_tag="JQ356_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HAY4622072.1"
                     /translation="MIERELGNWKDFIEVMLRK"
     gene            complement(10717..13829)
                     /gene="acrD"
                     /locus_tag="JQ356_001966"
                     /pseudo
     CDS             complement(10717..13829)
                     /gene="acrD"
                     /locus_tag="JQ356_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416965.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
     gene            complement(13992..15692)
                     /gene="narQ"
                     /locus_tag="JQ356_001967"
     CDS             complement(13992..15692)
                     /gene="narQ"
                     /locus_tag="JQ356_001967"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HAY4622073.1"
                     /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL
                     NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG
                     IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQM
                     SSELHKLYLSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD
                     NEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN
                     SVSSMLGRGLYFNQAQKHFQHLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP
                     EDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
                     LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD
                     NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
                     "
     gene            15898..17877
                     /gene="aegA"
                     /locus_tag="JQ356_001968"
                     /pseudo
     CDS             15898..17877
                     /gene="aegA"
                     /locus_tag="JQ356_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416963.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     AegA"
     gene            17945..18520
                     /gene="nudK"
                     /locus_tag="JQ356_001969"
     CDS             17945..18520
                     /gene="nudK"
                     /locus_tag="JQ356_001969"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose pyrophosphatase NudK"
                     /protein_id="HAY4622074.1"
                     /translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR
                     GNGATILLYNAKKKTVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAI
                     EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF
                     SQALEMIKTGEIRDGKTVLLLNYLQTSHLMD"
     gene            18646..19689
                     /locus_tag="JQ356_001970"
     CDS             18646..19689
                     /locus_tag="JQ356_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HAY4622075.1"
                     /translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVAR
                     NTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDK
                     WRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG
                     SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL
                     DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQ
                     ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW
                     HGPDAWPTLWITR"
     gene            complement(19799..20694)
                     /locus_tag="JQ356_001971"
                     /pseudo
     CDS             complement(19799..20694)
                     /locus_tag="JQ356_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300650.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
BASE COUNT         5017 a         5308 c         5559 g         4875 t
ORIGIN      
        1 atcgcatcat ccctctggga gatggcattg accgggcaga cctgcaggca aggggcttcc
       61 tcacagtgat gacacacgac aggggcagtg attgttgacg tcttcgccag ggccaggcgc
      121 gggtgttgct gtaaaccttg cgttttatgc acgtccgaac aggcagcgag acaggtatta
      181 catcctgtac accacagtgg ttcggccacc acaaagcggt tcatgtcggc tccttgaaaa
      241 tgatatgaaa cattgcattt catattgcat aaaggatgcc agtctgatta atttaatata
      301 ttcaataaat tatgtattaa cagggttctg aacggtacaa aaatgatggt cattaacgtt
      361 cagcaaaaaa tggattcgac acccgtgtcg caggggaaag cgagaatgtg atcttgatca
      421 cgagaagtga ggtgtgctga ccgcaagcgc agccagcacg gaatggagca aagtaatcag
      481 gcgtgttctt tcagccagtt cagcacaacg tcgtggtgat tgctggtttt aaaatcgtca
      541 aagacatgtt cgattttgcc atcagcgtca atcaggaagc tgatgcgatg aataccatcg
      601 taggttttgc ccatgaagga cttttcaccc cagacgccga attgttcgca cacctggtgg
      661 tcctcatcag acaggagcgt aaagttaagc agctcttttt ccgcaaaacg ggagagtttt
      721 tcgggtttat cggtgctgat acccagcaca tcaacgcccg cttttttcaa ctcatccatg
      781 ttatcgcgta agccgcaggc ctgtacggta cagccggggg tcatggcttt cgggtagaaa
      841 taaaccagaa cacgctgtcc ctggaagtcg gtcaaattaa cttgttctcc gtcttgatcc
      901 ggcaagctaa atttcggtgc gatatcaccg gctttcagtg gattcattac ttaactccat
      961 cctgttcatc atgttgggaa taattgacga cgttaatact gccttgtgca ttgagttctg
     1021 tacatagggc tttgaacgct tgctcaatat ttgctgcgtc cgcagatgcg gggctgtggg
     1081 cggtgatctg aatatgcaac tgcgcagccc gttcattttc agcaggttgc gtgcgcgaca
     1141 ccagctccgc aatgttcata tgatgcgcgt cgaaaagtgc tgtgaagcgt tcaattaaat
     1201 gcggggagtc tgcaacatcg acctgaaccc agacagatgc tggcattggc ggacgcggac
     1261 gcgccgtcgt gcgcttcatc acgattaaaa gatccagttc ggcacctttc aacggtaacg
     1321 ttgattcaat cagagtaatg gcattccatg aaccggaaag cagcatgata aacgtgaact
     1381 cttctcccag catcgccagg cgactgtctt caatattaca gccgcaacta ctgacatgac
     1441 gggtgatggt gttcacaatt ccagggcgat cggcacccaa cgcagtgatc accagataat
     1501 gttgcgatga cagtgtcaaa ctggttattc ctttaagggg tgagttgttc ttaaggaaag
     1561 cataaaaaaa acatgcatac aacaatcaga acggttctgt ctgcttgctt ttaatgccat
     1621 accaaacgta ccattgagac acttgtttgc acagaggatg gcccatgttc acgggaagta
     1681 ttgtcgcgat tgttactccg atggatgaaa aaggtaatgt ctgtcgggct agcttgaaaa
     1741 aactgattga ttatcatgtc gccagcggta cttcggcgat cgtttctgtt ggcaccactg
     1801 gcgagtccgc taccttaaat catgacgaac atgctgatgt ggtgatgatg acgctggagc
     1861 tggctgacgg gcgcattccg gtgattgccg ggaccggtgc taacgctact gcggaagcca
     1921 ttagcctgac gcagcgcttc aatgacagcg gtatcgtcgg ctgcctgacg gtaacccctt
     1981 actacaatcg tccgtcgcaa gaaggtttgt atcagcattt caaagccatc gctgaacata
     2041 ctgacctgcc gcaaattctg tataatgtgc cgtcccgtac tggctgcgat ctgctcccgg
     2101 aaacggtggg ccgtctggcg aaagtaaaaa atattatcgg aatcaaagag gcaacaggga
     2161 acttaacgcg tgtaaaccag atcaaagagc tggtttcaga tgattttgtt ctgctgagcg
     2221 gcgatgatgc gagcgcgctg gacttcatgc aattaggcgg tcatggggtt atttccgtta
     2281 cggctaacgt cgcagcgcgt gatatggccc agatgtgcaa actggcagca gaagggcatt
     2341 ttgccgaggc acgcgttatt aatcagcgtc tgatgccatt acacaacaaa ctatttgtcg
     2401 aacccaatcc aatcccggtg aaatgggcat gtaaggaact gggtcttgtg gcgaccgata
     2461 cgctgcgcct gccaatgaca ccaatcaccg acagtggtcg tgagacggtc agagcggcgc
     2521 ttaagcatgc cggtttgctg taaagtttag ggagatttga tggcttactc tgttcaaaag
     2581 tcgcgccagg caaaggttgc gggtgtttcg cttattttat tactcgctgc ctgtagttct
     2641 gactcacgct ataagcgtca ggtcagtggt gatgaagcct acctggaagc ggcaccgctt
     2701 gcggagcttc atgccccggc tggaatgatt ttgccggtga cctccggtga ttatgcaatc
     2761 ccggtgacca acggtagtgg tgctgtcggt aaggcgctgg acattcgtcc accagcccag
     2821 ccgctggcac tggtttctgg cgtgcgtacc cagttcacgg gcgataccgc ttcattgctg
     2881 gtggaaaatg gtcgtggcaa tactctgtgg ccgcaggtgg ttagcgtgct gcaggcgaaa
     2941 aactacacca tcacccaacg tgatgatgct ggtcagacac tgaccatcga ttgggtacaa
     3001 tggaaccgtc tggacgaaga cgagcagtat cgtggtcgtt atcaaatctc tgttaagccg
     3061 cagggttatc agcaggcggt tacggttaaa ctgctgaacc tggaacaggc gggcaaaccg
     3121 gttgcagacg cggcttccat gcagcgttac agcacggaga tgatgaacgt tatttccgcc
     3181 ggtctggata aatctgcctc tgacgccgcg aacgctgcgc aaaatcgtgc ctccaccact
     3241 atggacgtac aaagtgcagc tgatgacacc ggtttaccga tgctggtcgt acgcgggccg
     3301 ttcaatgtgg tttggcaacg tctgccagcg gcgctggaaa aagtgggcat gaaagtgacc
     3361 gacagcaccc gttcgcaggg taacatggcc gtaacttata agccgctgtc tgacagcgac
     3421 tggcaggaac tgggcgcgag cgatccaggc ctggcatccg gtgactataa actgcaggtt
     3481 ggcgatttag ataaccgcag cagcctacag ttcatcgatc cgaaaggtca tactctgact
     3541 cagagtcaga acgacgcgct ggtagctgtc ttccaggctg cgtttagcaa gtaaaaatac
     3601 agggctggag tcatccggcc cttttttctg atatgatacg caaacgtgtg cgtcggcaga
     3661 aaaatgcaat tttagcggta attcgcacga aatttgtttg tcggacgtag gtcggataag
     3721 gcgttcttgc cgcatccgac aaaacatccg gcacaccaga cagcaaaaga ttttaaaacg
     3781 ttaattcaca cccaggagtg ataaagatgc aaaagcaagc tgagttgtat cgtggtaaag
     3841 cgaaaaccgt atacagcacg gaaaacccgg acctgttggt gctcgaattc cgcaatgata
     3901 cgtcagcagg ggatggcgcg cgcattgagc agtttgatcg caaaggtatg gtgaacaaca
     3961 agttcaacta cttcattatg agcaaactgg ctgaagcggg tatcccgact caaatggagc
     4021 gtctgctctc cgataccgaa tgtctggtga aaaagctgga tatggtgccg gttgagtgtg
     4081 tcgtgcgtaa ccgtgctgct ggctctctgg tgaaacgtct tggaatcgaa gaaggtattg
     4141 agctgaaccc gccgctgttc gatctgttcc tgaaaaacga tgccatgcac gatccgatgg
     4201 tcaacgaatc ttactgcgaa acctttggct gggtgagcaa agagaacctg gcgcgtatga
     4261 aagagctgac ctacaaagcg aacgacgtgc tgaaaaaacg gttcgatgat gctggtctga
     4321 ttctggtcga cttcaagctg gagtttggtc tgtacaaagg tgaagtggta ctgggcgatg
     4381 agttctcccc ggacggcagc cgcctgtggg acaaagaaac actggagaaa atggacaaag
     4441 accgtttccg ccagagcctc ggtggcctga tcgaagccta tgaagccgtc gcccgccgcc
     4501 tgggtgtaca gctggactga tttttctgtt catcatcttg ccgtgcagct ggcacggcaa
     4561 gacaaccgct ctcggaatat atgcattgaa cgctcattcc tccgccattt catcccgctt
     4621 tcctgtggta atcttcctct gaaccaccta cgatcatttc tataatgaat atattgttga
     4681 ggtatctatg cgttggcaag ggcgacgtga aagtgacaat gttgaagaca ggcgcaacag
     4741 ctccggtggt ccgtctatgg gcggtcccgg ttttcgcctg ccaagcggta aaggcgggct
     4801 gattttactg atagtcgtgc tggttgcagg ctactatggt gttgatttaa ccgggttaat
     4861 gactggacag ccggtttccc aacaacaatc aacgcggtcc attagcccta atgaagacga
     4921 agctgcaaaa ttcacctcgg tgattctggc aaccacggaa gacacctggg gacaacagtt
     4981 cgagaagatg ggtaagacct atcagcaacc gaagctggtc atgtaccgtg gaatgacgcg
     5041 caccggctgc ggggcgggcc agtccattat ggggccgttc tattgcccgg cggatggcac
     5101 agtttatatc gatctctcct tctatgatga catgaaagac aaacttggcg cggatggcga
     5161 ttttgcccag gggtacgtta tcgcccatga agtcggtcat catgtgcaga aactgttagg
     5221 catcgagccg aaagttcgtc aactgcaaca aaacgcgacg caggcggaag tgaaccgctt
     5281 atctgtgcgt atggaactcc aggccgactg ttttgccggt gtctgggggc ataacatgca
     5341 gcagcaaggc gttctggaaa ccggcgatct ggaagaggcg ctgaatgcgg cgcaggccat
     5401 cggcgatgac cgtttacaac agcaaagtca ggggcgagta gtaccagaca gtttcacaca
     5461 tggcacttct cagcaacgct acagctggtt taaacgtggt ttcgacagcg gcgatccggc
     5521 acaatgcaat acttttggta aaagcattta atttccgggg cagggatggc tgaactgact
     5581 gcgctttaca cattaacagc gcaaatgaaa cgtgaaggga tccgccgctt gctggtgttg
     5641 agcggggaag agggttggtg ttttgatcat gcgcttaagt tgcgtgatgc cttacttggc
     5701 gactggctgt ggatttcgcc gcagccagat gctgaaaacc actgttctcc ctcggcgcta
     5761 caaactttac ttgggcgcga gttccggcat gcggtattcg acgcccgcca cggctttgat
     5821 gccgctgcct ttgcggcact tagcggaacg ttgaaagcgg gaagctggct ggttttgtta
     5881 ctccctgtat gggaagagtg ggaaaaccaa cctgatgccg actcgctgcg ctggagtgat
     5941 tgccctgacc ctattgcgac gccgcatttt gtccagcatc tcaaacgcgt acttacggcg
     6001 gataacgacg ctattctctg gcggcaaaac cagccgttct cgttggcgca ttttactccc
     6061 cgtactgact ggcaccccgc gaccggcgca ccacaaccag aacaacagca actcttacag
     6121 cagctactga ccatgccgcc gggcgtggca gcggtaacgg ctgcgcgtgg gcgcggtaag
     6181 tcggcgctgg cagggcaact catttctcgt attgcgggca gtgcgattgt caccgcgccc
     6241 gcaaaagcgg caacggatgt actggcacaa tttgcgggcg agaagtttcg ctttattgcg
     6301 ccggatgcct tgttagccag cgatgagcaa gccgactggc tggtggtcga tgaagccgca
     6361 gccatacctg cgccgttgtt gcatcaactg gtatcgcgtt ttcctcgaac gttgttaacc
     6421 actacggtgc agggctacga aggcaccgga cgtggttttt tgctgaaatt ttgcgctcgc
     6481 tttccgcatt tacaccgttt tgaactgcaa cagccgatcc gctgggcaca gggatgcccg
     6541 ctggaaaaaa tggttagtga ggcactggtt tttgacgatg aaaacttcac ccatacacca
     6601 caaggcaata tcgtcatttc cgcatttgaa caaacgttat ggcgaagcga gccagaaacg
     6661 ccgttaaagg tttatcagtt attgtctggt gcgcactacc ggacttcgcc gctggattta
     6721 cgccggatga tggatgcacc agggcaatat tttttacagg cggctggcga aaacgagatt
     6781 gccggagcgc tgtggctggt ggatgagggg ggattatctc aacaactcag tcaggcggta
     6841 tgggcaggtt ttcgtcgccc gcggggtaat ctggtggccc agtcgctggc ggcgcacggt
     6901 agcaatccac tggcagcgac attgcgtgga cggcgggtca gccggatagc agttcatccg
     6961 gctcgtcagc gcgaaggcgt tgggcaacag ctcattgcca gcgctttgca atatacgcaa
     7021 gacctcgact atctttcggt gagttttggt tacaccgggg agttatggcg tttctggcaa
     7081 cgctgcggtt ttgtgctggt acgaatgggt aatcatcgtg aagccagcag tggttgctat
     7141 acggcgatgg cgctgttacc gatgagtgat gcgggtaaac agctggctga acgtgagcat
     7201 taccgtttac gtcgcgatgc gcaagctctc gcgcagtgga atggcgaaac acttcctgtt
     7261 gatccactaa acgatatcgt gctttctgac gacgactggc ttgaactggc cggttttgct
     7321 tttgctcatc gtccgctatt aacgtcgtta ggttgcttat tgcgtctgct acaaaccagt
     7381 gaactggcat taccggcgct gcgtgggcgt ttacagaaaa atgccagtga tgcgcagtta
     7441 tgtaccacac ttaaacttgc aggccgcaag atgttactgg tccgtcagcg ggaagaggcc
     7501 gcgcatgcgc tgttcgcact taatgatgtt cgcactgagc gtctgcgcga tcgcataacg
     7561 caatggcaat tttttcactg actccttcaa ttttctccca tggtcattgt gagccagcgg
     7621 cgtaaaatta atgacatcag ttaaggagtt cgccatgaaa catgaccatt ttgttgttca
     7681 aagcccggat aaacctgtgc aacagttgtt actgcttttc ctcggtgtcg gggataactc
     7741 ggtggcaatg ggggaaatag gcagttggtt tgcaccgctg tttcctgatg cgctggtggt
     7801 gagtgtcggt ggcgcggagc cgagcggtaa tccggcgggg cgtcagtggt tttcggtgca
     7861 gggtattacg gaagataatc gccaggcgcg tgtggatgcc atcatgccga cgtttattga
     7921 aacggtacgc tactggcaga aacagagtgg agtaggggct aacgccacgg cgttaatcgg
     7981 tttctctcaa ggcgcgatta tggcgctgga gagtattaaa gccgaaccgg gccttgcttc
     8041 acgcgtcatt gcttttaacg gacgctatgc gagcctgccg gaaaccgcgt ctacagcaac
     8101 gacaattcac ctgattcatg gcggtgaaga tccggttatc gatctggcgc atgcggttgc
     8161 ggcgcaggaa gcgttaatca gtgccggtgg tgacgtgacg ctggatatcg tggaggattt
     8221 aggccatgcg atcgacaatc gcagtatgca atttgccctg gatcacttgc gttataccat
     8281 tccgaaacat tatttcgacg aagcgctaag tggcggtaag cctggcgatg atgatgtgat
     8341 tgaaatgatg taaaagacag attacctggc ctgataagac gcgtgagcgt cgcatcaggc
     8401 atcgttcacc attgccggat gcggcgttaa cgccttatcc ggcctacggt tgagcactca
     8461 gcttacttct tcggttgatc ctttttcggc cagtcgtcgt catcgtccca cttatcgttg
     8521 aaatcacgat gcgggggaag ctccggcttg ttggcgagaa atttcttgtg gtcgacgcgc
     8581 ttgagatctt taatcacgtt cagcaggacg cctaccaaaa agacaatcac cagaatccac
     8641 caatatttag ccagccagtc catgcttatt tcctcttgca gaaccactca tcaggcgacg
     8701 agctgttcca tgatacgttg atacatacgg gcaagtagct gcaggtcggc agcgttcaca
     8761 cattcattaa ttttatgaat agtggcattg accggcccga gttccaccac ctgcgccccc
     8821 atgcgagcaa taaagcgccc gtcggacgtt ccgcctgtgg tcagtagctg cggtttaatt
     8881 tcattatagt gctcaaccgc gttaacgacc gcatccacca gtttaccgcg cgcggtcaaa
     8941 aatggctgcc cggaaagcca ccaatccacc gtatagcgca gttgatgttt ttcaagcagg
     9001 gcaagcacct gcgctttgat catctcatca gtcagttcgg tgctgaagcg gaagttaaac
     9061 tgcacaaaca gttcacccgg aataacattg ttactgcccg ttcccgcctg aatattagca
     9121 atctgcatac tggtcgccgg gaaaaattca ttgccctgat cccactcaat agccactaat
     9181 tcattaagga aaggtgctgc gcgatgtact ggattgtcag ccagatgcgg gtaggccaca
     9241 tgcccctgaa cgccatgaat ggtaaggttg caggttaacg atccgcgacg accatttttc
     9301 accacatcac caaccacttc gatactcgac ggttcgccga ccaggcagta atcgagacgc
     9361 tcattacgtg ccatcaacgc ttcgacgact tttaccgtac cgttgtgggc actggcttct
     9421 tcatcagagg tgatcagaaa tgccagtcgc cccgtatggt tgggatgttg tgcgacaaag
     9481 cgttctgccg ctaccaccat cgccgccagc gagcctttca tatctgccgc accgcgcccg
     9541 aataacatgc catcacgaat ggtgggttca aacggcggat tgatccaacg atcggcgtcg
     9601 ccaggcggca ccacgtcggt atgcccggca aaggctaacg tttcaccttg cccacgccat
     9661 gcccaaaaat tctgcgtatc ggcaaagtcc atgcgttcaa cggtaaaacc gatcgcctgc
     9721 aaacgttcaa tcaacaaagc ctggcatcct gcgtcatcag gactcaggga agggcggcga
     9781 ataagctgtt gtgtcagctc aataaccggg cacgacatag actacacctc atggaaaaat
     9841 tgctgataac tggaatcact gaaacccagc agcataggct taccaggcgc gcagagcaat
     9901 ggacgtttga taattgaagg catttcagtc attaatgccg ccgcagaggc cgcatcggtg
     9961 attttattgc gggtggtttc gtccagttta cgccaggttg taccacgggt gttcagtaac
    10021 gcttcccagc ctaattcgtt gataaaaccg ttcaataatt cgctgtccag cccatcgacg
    10081 cggtaatcat gaaaacgata gtcgatgtta ttggcttcca gccaacggcg agccttttta
    10141 atggtgtcac aatttttgat gccgtaaagt gtaaccataa tgaatccttt ttcgatctat
    10201 gagaataaat actcatttaa gggtgaaaac attttgcctg caaatgatta tcaggaaata
    10261 taacattatc gaagtattca aattaacaac tattaaataa tattaaacat ttttaacgta
    10321 aacattaaga atattcatct tgttatctgt ctgtatttta accagaatta aatcagtatt
    10381 agatgccgta tgaatatctc gaaatgttgc tgtgtatcac atacaaatta tcaccgcagg
    10441 accatagtat ttacataagg tttgtccccc ggaggtagtc atcgcagcaa tcgagtaaat
    10501 tagcttcacc acggtatatt gtttccgtag aatacccata attataagag aggttgttat
    10561 gattgaacgt gaactgggga actggaaaga ctttatcgaa gttatgcttc gtaagtaatt
    10621 cctgagacaa agtacaaaca gcaagaaccc gctgagcagg ttcttaatcg gaaagttgaa
    10681 aaaggcgaca cattagcatg tcgccttttt tattgcttat tccgggcgcg gcttcagcgg
    10741 gaagcggcgg cgcaccagta caaagaacag cggcacgaag taaatagcca gaatagtggc
    10801 cgaaatcatc ccgcccatta cgccagtacc caccgcatgc tgaccaccgg aaccggcacc
    10861 cgtgctggtt gccattggca atacgccgaa gataaatgcc agcgaggtca tcagaatcgg
    10921 gcgtaaacgc tgacggcagg cgtggagcgt cgcttcaaac aggtcgtggc ctttttggtt
    10981 catctcgtta gcaaactcga cgatcaggat ggcgtttttc gccgataaac caatgaccgt
    11041 taacaggccc acctggaagt aaacgtcgtt ttccagcccg cgcatccagg ttgccagcag
    11101 cgcgccgata acccccagcg gcacgaccag cattaccgag aacggcaccg accagctttc
    11161 atacaacgcc gccagacaca ggaataccac cagcaaggaa atggcgtaca gcgccggagc
    11221 ctgcgcgccg gaaagccgct cctgatacga catcgccgtc cactccagac caaagccgtt
    11281 tggcaactgc ttcactaacg attccattat atccatcgcc gtaccggtac tgacccccgg
    11341 tgcggcttcc ccaacaatct caaccgcaga ataaccgtta tagcgttcca gacgcggcga
    11401 gccagtctcc cagcgtgagg tcgcgaaagc agagaagggc accatgccgc catctttatt
    11461 tcggacatac cagagattaa tgtcatctgg cagcatgcga tacggcgcag ctgcctgcac
    11521 atagactttc ttcacacgac cgcgatccat aaagtcattc acatagctcg aaccccaggc
    11581 ggtttgcagt gtgtcgttaa tatcgtcgat agcaacgccc agcgcctgag ctttacgctg
    11641 gtcgatatca atctgcaact gcggactgtc atcgaggccg ttatggcgca cacgggttag
    11701 ctccgggttt tccgccgcca gcgccagcaa ctggttacgt gctgccatca gcgcatcgtg
    11761 acctgctcca gcgtggtcct gcaactccat atcaaaaccc gcagaactac caagaccgct
    11821 aattgctggc gggctgctgg cgataacgcg agcttcttta atcttgttaa acgcctttgt
    11881 tgcacgctcg ataatggcaa acgaggtgcc ggtcttactg tcgcgttcgc tccagtcttt
    11941 caggcggata aacattcgcg ccacgttttg cccgttaccc ccagggccag aaccaacggt
    12001 ggcaaacacc gacatgatgt tgtctttttc atgggtgaag taatatttct cgatttgctc
    12061 aacgactttc agggtctgtt gttgggttga accgctgggc aattgtaccg aggtagtaaa
    12121 catgccacgg tcttccagcg gtaagaacga cgtcggcaaa cgcaggaaca ggaacaccat
    12181 gccgccaagc agcaggacat aaatcacaat ccagcgcagg ctgcggtgga gaattttcgc
    12241 cacccctttt tcgtagcgtt cggcgttgcg gttaaacatc tggttaaacc aggcaaaaaa
    12301 gcctttttgc ccgtgatgct cacctttttt cagtggctta agtagtgtgg cacacagagc
    12361 cggagtgagg atcatcgcta ccagtactga cagcaccatc gccgcaacaa tggtaataga
    12421 gaactggcga tagatggcac cggtggtgcc gccgaagaag gccattggta caaataccgc
    12481 cgaaagcacc atcgcaatcc cgaccagtgc cccctggatc tgccccatcg atttacgtgt
    12541 ggcttcgcga ggagcgagtc cttcctcact cataatacgt tcgacgtttt ccaccaccac
    12601 gattgcgtca tccaccagca gaccgatcgc cagtaccatc gcgaacatgg ttaaggtgtt
    12661 gacgctgtaa ccgaaggcgt aaagtacgga gaaggttccc atcaacacca ccggcacggc
    12721 gatagtgggt atcagcgtgg cgcggaagtt ttgcaggaac agatacataa cgaggaaaac
    12781 cagggcgata gcttccagca gcgttttcac cacgtcttca atggaggctt taacaaacga
    12841 ggttgtttca tacgccacct tgtattccag tccgtgcggg aagtactgcg ccagctcgtc
    12901 gagacgattg agcaccagct ccctgtcgcc atttcgtttg cgccggaggc cagttttacc
    12961 cccagcccgg aggctggctt accattgaag cggctaagat aatcgtattt ctccgccccc
    13021 atttcgacgg tggcgacatc gcccagcctt acctctgagc cgtcttgatt cacccgcaag
    13081 gtgatatcgc ggaactgttc tggtgtttgc agcagtgact gggcgttaat ggtggcgttg
    13141 agcgcctgct tatcgacgga aggtgtacca ccaagttgcc caaccgcaat ctgcgcgttc
    13201 tgtgactcaa tggcatcagt gacatcttta gccgtcatct ggaaactgtt gagtttcgcc
    13261 ggggccagcc agatacgcat ggaatattgc gaaccatagg catcgatatc cccgacgcca
    13321 ttcacgcggc ttaacgggtc ctgaatatta ctggcaacat aatcggcaat atcctgttta
    13381 tccatcgaac catcggtaga gacgaaagca atggtcagaa tattggtatc gccggtttta
    13441 cgcaccgtca cgccctgatt ttgcaccgcc tgcggtaact ttcgcatggc tgattgcagc
    13501 tggttttgta cttgctgcac ggcttcgtcc ggatcggtgc ctgctttaaa acttaaagtg
    13561 acagatgcct gaccggtgcc actgctctga gatgacatat acatgagatt atcgaggccg
    13621 gtcatatttt gctcgataac ctggggcacg gtgttttcca gcgtctgggc cgatgcgccg
    13681 ggatagttag cggtcactcg cacattcggt ggcgcgagat cggggtattg ttcaacgggc
    13741 aatgaaaaaa tcgccagggt ccctgtcaga cacaacagga ttgccagcac ccaggcaaaa
    13801 atggggcgat caataaagaa attcgccatt aaaagaggac ctcgtgtttc tgcgtatcgt
    13861 tgtaggcttg acttgcttca ctgtagcggc aaggtacgag ccaatcgtgg agaaaaaagg
    13921 agttaatgta aattatcatg cccttttata ctgaacctta agtgcaagta ttctttggtc
    13981 agtaggaggc attacatcaa ctgactttcc tcaccctctg cagagcgaaa gctaatactc
    14041 actaacgtgc cgccgccgga aggttgtgaa aaagtcagcg tcccacccag ccgttccgcg
    14101 cgttcgcgca tgatattcag accataatga ccttcgggtt ctttcggttc accgatacca
    14161 atcccgttat cacggatata aaccgtgtga ttgccgtccg gcgcggtgac gcaactgacg
    14221 gcgatttcgc tggcgttggc gtgcttcatc gcattcagca ccgcttcgcg aataatttgc
    14281 aacaaatgca cctgcatttg cgcatccagc gcaagggttg gcagacggca gtcgagggtc
    14341 agtttggcgc tggtttgatt ttgtaacgta tccagcattt ccctcaacgc ggaggggaga
    14401 tccgcctgct gcagcgtcag gcggaaagta gtcaacagct cgcgtaactg ccgataagca
    14461 tcattcaacg cctgggaaaa atcggccatg atactttgtg cggtggcgtt atcttccggt
    14521 atcgaacgct tcagtaacgt caactggata cgtaagtaag aaagtacctg agccagcgag
    14581 tcgtgcaatt cgcgggcgat ggttgcacgt tcttccatca acaataaatg ctgaaaatgc
    14641 ttctgcgcct gattaaagta caaaccgcgt cccagcatcg acgaaacgct gttaagcagc
    14701 ggttctgatg atgaaacgtg actattttgc cagtgcagtt cgccgtaaac cgtctcttgc
    14761 attgtcaccg gtaaaatctg catcggcaat tccgggtttg gttgcccttc gctaatccgc
    14821 cagttttcac cgacatttaa ctccagatat tcagccgctt cattgtcgcg aacaatctgc
    14881 aaaatatggc ggaaacaatg cacatcaatc tggcttgtgt tcagcgcctg cgaacattga
    14941 tacaacacct ccagacgacg cttggcctcg tggagatcgc gggtcttttc ttctactgac
    15001 gcctccagcg aaaggtacaa tttatgcagc tcgctcgaca tctggttaaa ggtttttgca
    15061 agcagaccaa gctcattcgg cagactggta tccagcggcg gcgagtcgaa ctgcccgtgt
    15121 tcaatacgtt gactggcggt aaccagctga ttcagcgggg caaccacctg atggcgtata
    15181 cggcgcaaag taaaaaagac cagcgtgaaa ataccgatac cgccagccag ggaaatcgcc
    15241 accaccagca gcattttgcg ttcagcgtag tgctgtaaag ccagcacgaa caggtctatc
    15301 tgattaacat aattattaat attggcctga taccacggca aatcgccctt gctgagccga
    15361 ttattcatct ccagccagtt ggcattcaga tgcgcatagc gagtttttac tgcttctggc
    15421 acataccaga cgttgagatt ggttaatacc ggtgaatgca gtgcctgctg aaacaactgg
    15481 cgatgtgcat tgagttgtgg actgccactt tgcaagtcgt agcccaggcg gtaactctgc
    15541 atacgcagcg atccggcaat attgatagcc tcagcgtcgc gcaaactgct cgccagagtt
    15601 agcagagcga tacccgtgga aagaatcgac agcagcacaa tgtaaaaaaa ggcccgggcc
    15661 agactggccg agacgggtcg tttaacaatc acacgcgtct tctccacaaa aaatcattaa
    15721 tgttccagtt cgctgaaacg caatttagtc agtgatggga ttatttgagc tgccacagtt
    15781 tatagcgaaa tagttactta ttctgggcac atgaacattg ccgattcccc tgtaagtcgg
    15841 gtaataacaa cactcatata aagaataagg tttttacaac caaaaaagaa ggtcgttatg
    15901 aatcgtttta ttatggccaa cagtcagcaa tgtctgggtt gtcatgcttg tgaaatcgcc
    15961 tgtgtcatgg cttacaatga tgagcaacat gtcctgagcc aacaccattt tcatccccga
    16021 attacggtta tcaaacatca gcagcaacgt agtgcagtga cctgtcacca ttgtgaagat
    16081 gcgccctgcg cccgtagctg ccctaatggc gcaatcagcc acgttgatga cagcattcag
    16141 gtcaatcagc aaaagtgtat tggctgtaaa tcctgcgtgg tggcctgtcc gtttggtacg
    16201 atgcaaatcg tcctgacacc cgtcgcggca ggaaaagtaa aagccacggc gcataaatgc
    16261 gacctttgtg cagggcgcga aaacggtcct gcctgtgtcg agaattgccc ggcggacgcg
    16321 ctgcaactgg tcactgacgt cgcactctcc ggcatggcga aatcccgccg cttgcgcacc
    16381 gcacgtcagg agcatcaacc gtggcatgcc agtaccgctg cacaagaaat gccggtaatg
    16441 agtaaagtcg aacaaatgca ggcaacgccc gcgcgtggcg agccggataa actggcgatt
    16501 gaagcgcgca aaaccggttt tgatgaaatt tatctgccat ttcgcgccga ccaggcacaa
    16561 cgggaagcct cgcgctgcct taagtgcggc gagcacagcg tttgtgaatg gacctgcccg
    16621 ctgcataacc atattccgca gtggattgaa ctggtgaaag ccggaaacat cgacgccgcc
    16681 gtcgagcttt ctcaccagac caacaccctg ccggaaatta ccggacgcgt ttgtccgcaa
    16741 gaccgtttgt gtgaaggtgc ctgtactatt cgcgatgagc acggcgcggt aactatcggc
    16801 aacattgaac gctatatttc agatcaggcg ttggcgaaag gttggcgtcc tgacttaagt
    16861 catgtcacca aagtggacaa gcgggtggcg attatcgggg caggtccggc agggctggcc
    16921 tgtgcggatg ttctgacccg caatggcgtg gcggtgacgg tgtacgatcg ccatccagaa
    16981 atcggtggct tgctcacttt cggcattcct tctttcaaac tggataaatc cctgctggca
    17041 cgccgtcggg aaatcttcag cgcgatgggg attcacttcg aactcaattg tgaagtgggt
    17101 aaagatgtct ctttggattc gcttttggaa caatacgacg cggtcttcgt tggcgtaggc
    17161 acttaccgtt ccatgaaagc gggtttaccc aatgaagatg cgccgggcgt ttatgacgcg
    17221 ctgccgttcc tcatcgccaa cactaaacag gtgatggggc tcgaagagct accggaagag
    17281 ccgtttatca ataccgccgg acttaacgtc gtggtactgg gcggcggcga caccgcgatg
    17341 gactgtgtgc gtactgcgct gcgccacggc gcgagtaacg tcacctgcgc ttatcgtcgt
    17401 gatgaagcta acatgccagg ctcgaagaaa gaggtgaaga acgcccgcga agagggggcc
    17461 aacttcgaat ttaacgtcca gccggtggcg cttgagctga atgaacaagg tcacgtttgc
    17521 gggattcgtt tcctgcgcac gcgtcttggc gagccggatg cctaggggcg tcggcgtcca
    17581 gtaccggtgg aaggcagtga atttgtcatg ccagccgacg cggtgattat ggcgtttggc
    17641 ttcaatccgc acgggatgcc gtggctggag tcgcacggtg taacggtaga caaatggggc
    17701 cgcatcatcg cggatgtgga aagccagtac cgttaccaga ccaccaatcc gaaaatcttc
    17761 gccggtggcg acgccgtgcg tggtgcggat ctggtggtta ccgcaatggc agaaggacgt
    17821 catgcggcac aggggattat tgactggctg ggggtaaaat cagtcaaatc tcactgatag
    17881 cctgcgcaga caaacccgac ttcacagcgt aagataattg ttcatttcgc gctgtggagt
    17941 cggtatgacg caacaaatca ccctcattaa agacaaaatt ctctccgata actatttcac
    18001 cctgcacaac attacctacg atctcacgcg caaagatggc gaagttatcc gccataaacg
    18061 tgaagtttac gatcgcggta atggtgcgac gatcctcctg tacaacgcga agaaaaagac
    18121 cgtggttctg attcgtcagt tccgtgtcgc tacctgggtt aatggcaatg aaagcgggca
    18181 gctgattgaa acctgcgccg ggctgctgga taacgacgaa ccggaagtgt gcattcgtaa
    18241 agaagcgatt gaagagacgg gctatgaagt gggcgaagtg cgcaaattat ttgaactgta
    18301 tatgtcgcca ggcggtgtga ctgagctaat ccactttttt atcgccgaat acagtgacaa
    18361 tcagcgcgct aacgccggtg gcggtgtcga agatgaagat attgaagtgc tcgagctgcc
    18421 gttcagccag gcgctggaga tgatcaaaac cggcgagata cgtgacggta agacggtgtt
    18481 attgcttaac tatttgcaaa cgtcacattt aatggactga aaaataacaa taatatttcg
    18541 ttgtttatta ttggctcaat ccgacaaatc cgattgagcc gcgctacctg cgcaacgaag
    18601 atacgacttg tgctgtttgt ttgaacttct ggggtcgtac cgtccatgcg ctatcgcatt
    18661 ttccttctct tttttttcgc tttgttgccg acgtctttgg tgtgggcggc accagcgcaa
    18721 cgggcgtttt ccgactggca ggtcacctgt aataaccaaa acttctgcgt ggcgcgtaat
    18781 acgggcgatc ataatggact ggtgatgacc ctgagccgca gcgccggggc gcataccgat
    18841 gccgttttac gtattgagcg cggcggattg aagtcgccgg aggcgtcaga aggggagata
    18901 gcgccacggc tgctgttaga tggcgagccg ttggcgttaa gtggtgacaa gtggcggatt
    18961 tcaccatggt tattagtaac cgatgatacg gcaaccatca ccgcgttttt gcagatgatt
    19021 caggaaggga aggcgatcac cttacgcgac ggcaatcaga ccatttcgct gagtggctta
    19081 aaagcggcgt tgttgtttat tgatgctcag caaaagcgcg ttggcagtga aaccgcgtgg
    19141 atcaagaaag gggacgaacc gccgctcagc gtaccgcccg cgcctgcgct gaaagaggtc
    19201 gcggtggtta acccaacgcc gacgccactc tcactcgaag aacgcaacga tttgctggat
    19261 tatggaaact ggcggatgaa tggtctgcgc tgctcgcttg atccattgcg tcgtgaggtg
    19321 aatgtcactg cgctgactga tgataaagcg ctgatgatga ttagctgtga ggcaggggcc
    19381 tataacacca ttgatttggc atggattgtg tcgcgtaaaa atccgctggc ctcgcgcccg
    19441 gttcggttgc gtttgccgtt caacaacggg caggagacga atgaactgga actgatgaac
    19501 gcaacatttg atgagaaatc gcgtgaactg gtgaccttag cgaaagggcg cggattaagc
    19561 gattgtggca ttcaggcgcg ctggcgcttt gacggtcagc gttttcgcct ggtgcgttac
    19621 gccgcagaac ccacctgcga taactggcat gggccagacg cctggcccac gttgtggatc
    19681 acccgttaaa caaaatggcg gggacatgta ggccggataa gacgctgtag gccggataag
    19741 acgcgtcaga gtcgcatccg gcctacagcg tccggcaatc agcatccggc gatcaccatc
    19801 aggcaccttt cactcccagc accttatgcg cttttgccac aatattctcg gcggtaaagc
    19861 caaagaacgg gaacagctta tccgccggag cagattcccc ataacctgtc atcccaacaa
    19921 tcgccccttt caaaccaaca tacttgtacc agtaatcggc aatacctgct tccaccgcca
    19981 cgcgagccgc aacgttagaa ggcaacaccg actcccgata ttcctcatcc tgggcgtcga
    20041 aaatatcagt cgagggcagg gaaactacgc gtacattgcg accttctccc gctaatttct
    20101 ctgccgcttg cagggggatt tccatctctg aaccggtggc aatcaaaata atatctggct
    20161 taccgccgct gtctttcagc acataaccgc cacgggcaat ctcttttacc tgatccggcg
    20221 tacgttccac ctgggccaga ttctgccttg agaggatcag tgccgtcggt ccgttgtggc
    20281 gctcaaccgc cagcttccag cccaccgccg cttccacctg atcgcacggt cgccaggtgc
    20341 tgaaatttgg cgttaagcgc aggctggcca gttgctcaac agcctggtgc gtcggaccat
    20401 cttcgcccag gccaattgag tcgtgggtat aaaccataat ctgccgcgct ttcatcagtg
    20461 ccgccatccg cgcggcgtta cgggcgtatt caacaaacat caggaacgtg gcggtatacg
    20521 gcacaaagcc gccgtggtgc gcgatgccgt tggctatagc ggtcatgcca aattcacgca
    20581 ccccgtagtg aatgtagttg cccgccggat cttccttcag cgaaacagaa cctttccaga
    20641 tggtcaggtt gctggagcca gatccgccga accgccgagc aactcaggca gcatcggccc
    20701 gtaaggcagt atgactttcc gtgagacaga tgctggccaa cgtgggatat ttaacgcgg
//
LOCUS       DADKRT010000064        20720 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.065, whole genome shotgun sequence.
ACCESSION   DADKRT010000064 DADKRT010000000
VERSION     DADKRT010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20720
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.065"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(73..4533)
                     /gene="mukB"
                     /locus_tag="JQ356_001972"
     CDS             complement(73..4533)
                     /gene="mukB"
                     /locus_tag="JQ356_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HAY4622076.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
                     HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
                     ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
                     RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
                     ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS
                     SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
                     GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLDGLTDCPEDLYLIEGD
                     PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS
                     ERFATLSFDVQKTQRLHQAFSRFIGSHLAVVFESDPEAEIRQLNSRRVELERALSNHE
                     NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
                     FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
                     SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
                     KKELLNDLQRELQDIGVCADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE
                     MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
                     RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAAYQHLRERIRQDIIR
                     TDDPVEAIEQMEIELSRLTEELTSREQKLVISSRSVANIIRKTIQREQNRIRMLNQGL
                     QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
                     PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
                     VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
                     NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS"
     gene            complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="JQ356_001973"
     CDS             complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="JQ356_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HAY4622077.1"
                     /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEENQPDSGEEE"
     gene            complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="JQ356_001974"
     CDS             complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="JQ356_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HAY4622078.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLQVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
                     DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="JQ356_001975"
     CDS             complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="JQ356_001975"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HAY4622079.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ
                     KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA
                     QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
                     VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
                     HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
     gene            7458..8237
                     /gene="elyC"
                     /locus_tag="JQ356_001976"
     CDS             7458..8237
                     /gene="elyC"
                     /locus_tag="JQ356_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HAY4622080.1"
                     /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTAKIFIS
                     IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
                     LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGPSGEPRQE"
     gene            complement(8214..9107)
                     /locus_tag="JQ356_001977"
     CDS             complement(8214..9107)
                     /locus_tag="JQ356_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HAY4622081.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
                     ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
                     PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQEHFWPSWYRQHVEVLWTTLN
                     QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV
                     GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFSRRNFDLASKSLLPWLA"
     gene            complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="JQ356_001978"
     CDS             complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="JQ356_001978"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HAY4622082.1"
                     /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
                     MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYG
                     EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
     gene            complement(10004..10186)
                     /locus_tag="JQ356_001979"
     CDS             complement(10004..10186)
                     /locus_tag="JQ356_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HAY4622083.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
                     LLETEARVLTADESKS"
     gene            complement(10238..11470)
                     /locus_tag="JQ356_001980"
     CDS             complement(10238..11470)
                     /locus_tag="JQ356_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HAY4622084.1"
                     /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL
                     QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
                     RMLALEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
                     KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
                     LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
                     AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
                     LVGRMDAKMHRQTGILEVISLWLQEGIKPTTMLQKGLRQAITDFASWQQATRVTLGRC
                     PQGLFTDCRTGWEIDPVA"
     gene            complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="JQ356_001981"
     CDS             complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="JQ356_001981"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HAY4622085.1"
                     /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGSKAESYPLLLSADTT
                     TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE
                     IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
                     RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
                     SAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTSLASGN"
     gene            complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="JQ356_001982"
     CDS             complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="JQ356_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HAY4622086.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
                     IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
                     EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
                     EHRGVYAQLHKMQFGQ"
     gene            complement(14379..16547)
                     /locus_tag="JQ356_001983"
     CDS             complement(14379..16547)
                     /locus_tag="JQ356_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family protein"
                     /protein_id="HAY4622087.1"
                     /translation="MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPV
                     KTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQ
                     GRRIFPAPGLVLYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL
                     IGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRD
                     TGTAHLMAISGLHIAFAALLAAGLIRGGQVFLPGRWIHWQMPLIGGICCAAFYAWLTG
                     MQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAV
                     AALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANL
                     LAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIA
                     ERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVYMLDVGQ
                     GLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGL
                     DSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSVHWPLQASNDKGNNHSCVVK
                     VYDGTNSILLTGDIEVPAEQKMLSRYWQQVQTTLLQVPHHGSNTSSSLPLIQRVNGKV
                     ALASASRYNAITHGDCPLIKLSIAINSKDINGLILHIRVK"
     gene            complement(16754..17038)
                     /gene="ihfB"
                     /locus_tag="JQ356_001984"
     CDS             complement(16754..17038)
                     /gene="ihfB"
                     /locus_tag="JQ356_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HAY4622088.1"
                     /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            complement(17198..18871)
                     /gene="rpsA"
                     /locus_tag="JQ356_001985"
     CDS             complement(17198..18871)
                     /gene="rpsA"
                     /locus_tag="JQ356_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HAY4622089.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            complement(18982..19665)
                     /gene="cmk"
                     /locus_tag="JQ356_001986"
     CDS             complement(18982..19665)
                     /gene="cmk"
                     /locus_tag="JQ356_001986"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HAY4622090.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
                     VATFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ
                     YARQKLALA"
     gene            complement(19838..20601)
                     /locus_tag="JQ356_001987"
                     /pseudo
     CDS             complement(19838..20601)
                     /locus_tag="JQ356_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706828.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
BASE COUNT         4990 a         5724 c         5036 g         4970 t
ORIGIN      
        1 tatgtgccat ttttttagtg cagaaacgga gttttcggaa aaagaaaagg cggcattgct
       61 gccgccttaa ttttaactcg cctgagaagg cgcttcgtca gttcctggaa gcgtttcagg
      121 gagttgcggc gcaaatcctc gcaggccgac gacatgaaca tgttcggtat tctggaagac
      181 tttacgcacc agtttatagg tggtgccttt ctccgggctg atattttccg gcgctgcgat
      241 gatgagctgc atttgcaaac gctcacacaa ttcaaacagc gtggcgatag aacgagcatc
      301 cagtcgcgct gcttcatcga ggaacagcag acggcaagga gagatatctt taccgcgcag
      361 gcggcgagat tcatcttccc agctttgtac caccatcacc agaatcgaca taccggtacc
      421 aatcgcctca ccggtcgaca atgcaccaga ctctgcgcgc aaccaaccat cggaaccacg
      481 gttaacctca acttccattt ccagatagtt gcggtaatcc agcagttctt cgccaatggt
      541 ctgcggcgtg cgctgcccca tatcaatctg cggattaaga cgctgataca atttcgccaa
      601 cgcttccgag aaggtcagac ggttgctgtt aaacagatcc tgatgctgct cgtgctgttc
      661 agagagcaca tccagcagca tggcgtgcgt ttcacgcacg ttcacgttga ggcgcacgct
      721 gttcacctga ccaaacgata cgttctgcaa cccctggttg agcatacgga tacggttctg
      781 ctcgcgctga atggttttgc gaatgatgtt cgccacgctg cgggaactga tcaccagttt
      841 ctgttcacgg gaggttaatt cttcggtcag acggctaagt tcgatctcca tctgttcgat
      901 agcttccacc ggatcatcgg tacgaataat atcctgacga atacgttcac gcagatgctg
      961 ataagccgcc acgaagaact gaattttacg ctccggacgt ttcggatctt ccgacatgcg
     1021 cagcacgtcg cgcagatgtt cgttatccgc caccgccaga cgcagcgcac ccaatgcctt
     1081 atccgacata gagcgcaaat catcagcgga gagataagcc agctcacgac ggtgtaagcg
     1141 gcgctcaacg ccgttatctt tcaccatgcg catcaccgca caccagcccg ctttggcggt
     1201 cactacctgc tcgcgcatct caaagtaatc ccgctccagc ttgcgcagtt tgcgggtcag
     1261 gttgtccatc tccgcttcgc agaaggtaag cgctttttcc agttgattgc ggcgtgaacg
     1321 gttattgctc agttgcgcat gcagctcgtc acggcgaata cgcgcccgct cttctgcccc
     1381 gctatcagca cacacgccga tatcctgcaa ttcacgttgc agatcgttga gtagctcttt
     1441 tttggtgtcg taagaacttt tcagcgaagc cagcacctgg ttgtactgac tcaactgcgc
     1501 tgcgtgaccg cgcaacgctt cgcgagcgcg ggtacgctcc gcttccgcct gttccagacg
     1561 ttcacgcagt ttttcgttga gatcgctgtt accgctaagc atttctgccg agtcagagta
     1621 gctaaagtgc gcacgacgct gcaccacttc cgtcagggca aacgcctgct gacgggcatc
     1681 gcgctgcatc tgttgagagt acgcgtaatc ttcttttaac tgttcgaact gttccgggtc
     1741 gctctgcaat accgaaacga tcggttccag tttcgccagt tgattgccaa actgctgaac
     1801 aaaacgcgcg gcttcctggg cttcatccag acgttcgcgg atttcatcga cgcgatccgc
     1861 caggctatca tcagccaaca ggttgagacg cggcagaatg cggttcagcg ccgtaacgcc
     1921 ctctttcgcc tgctcaaact gaatacgctg ctgctggtta tcattttcat gattacttaa
     1981 cgcccgctcc agttcgacgc gacggctgtt cagttgacgg atttctgctt ccgggtcaga
     2041 ctcaaacaca accgccagat gactgccgat aaagcggctg aacgcctgat gcagacgctg
     2101 agttttctgt acatcaaagg agagcgtggc gaagcgttcg gaaagcactt cacgctcggc
     2161 atggaggctt tcaatacggc tttcacgcgc agcacgacca aacagcggca cttccgggaa
     2221 acgtgaataa cgccactgac gatcggcgat tttcaccact accgcttttt ccagctcatc
     2281 aacgctgaac acgctgtcat cgaatgactg cggatctcct tcgatcagat agagatcttc
     2341 cgggcaatcg gtcaagccat ctaggtgttc agttacctgt gacagatctg gcaccacgat
     2401 ggcgtggcgt gacgggccat acagcgctga gaagtacggc gcatcttcca ggctaacgtc
     2461 gtcataaatt tctgacagca gcacaccacc aaaacgctcc gccagcgcgt tcagacgctg
     2521 atcttcagag ccgccaggct ggcttaaacg ttcgatctct tcatcgacgg cgtttttgcg
     2581 cgcgcccact tcatcgcgtt caacaatcgc ctctcgctca cgctccagca actgttgcag
     2641 atattcggtg acgtcctggc tggaggtaaa ctcttcgccg cactgttcgc tcaactggtt
     2701 gagactgttt tgcgctgcca gccaaaccgg cgcacgctgc atcaaactct gaatgcgaga
     2761 ctgcagctgt tcctgctcct ggcgcagtgc catgcgctct tcacgggcgt tagacacgct
     2821 atcggaaaga gaggcaatgc gtgcttccag ttcctgatgc agggcttcca gttcgtcgat
     2881 atcaaaattc ttgccctgac gtttgcagaa atctgccagc agacgctcag cttcttgctg
     2941 ctcgcgtaga cgctgttcca gttcgcttaa tcgcatccgc agcggctgaa cctgctctgc
     3001 caggtgacgc tgatcgaccc cttcgcgcaa tagttcgcga gcgacatccc acgcctcgtt
     3061 acgcgccagt gggccgttga ttgccaccac cagctgataa gcctgctcaa actggctgtg
     3121 cgcggtttgc gccatgctca ttttctgctc aagagagagc attttttcag tcgcttccag
     3181 ctctttcgcc tggaaggttt ccagccattc ggcggcgctg tcggcggtta agtccggcag
     3241 atggcacagt tctttggcac gattaagcgc agcaatcgcc tggttatact ggatcgcgcg
     3301 cgtttgctgg acgtccagcg cctgctggta gtcagcaagc tggcttttca gctcgtccac
     3361 ttccagttcg gcagcttccg cgcgagcctc gttctcttcc tggcgttcga tggcttctgc
     3421 caccacttcg ttttgctctt ccagacggat ctgcagctca tcgagatccg cttcgtagcg
     3481 ttcgatcttc tcctgctgac gcagtgcggt ttgcaccagg ttcaggtgat cgctggccgc
     3541 ctgataatcc gcttccagat cgccttcggc accgttgtgc tctgccagct cacgcgccat
     3601 atcgacgtgt ttgtactgct cagccgccag ttgctgacgc gaagtatgta actcgcgacg
     3661 aaactccagg gctttgtcga gatggacacg gcgctcgttg gcgtgacgca tgtagtccgc
     3721 cgccacgtag ttggtagctt cgctgatcag atgcttaaac aggtcacggt ccgactgggt
     3781 gacacgaatc gcttccagcg tcatgcggtt ttcacgcagc gccgcttcca tgtcctggaa
     3841 cgctttacgc acgccgctgt tttccggcaa cagatagtcg cgcagagaac gggtaatggc
     3901 actggagatc ccgccataca gcgaagcttc gatcagacga tagaatttgc tacggtcaga
     3961 tgcggagcgc agacgacgcg cgatgatgcc cagatcgaac atcagcgagt ggtaatcggt
     4021 aatggagttg aactgtttaa actgcacgcc ttccatcgcc tcgagcttgt ctttcagctc
     4081 gttaagcggc agcacgcgcg cctggcgttc gttcagggtt tcggtcacca gctgtgtcgg
     4141 ctgcaccgac atcggcagtc cctgaatggc aaatggtttg atatccactt tacgatcgcg
     4201 tccggcaacc tgttgcagac gcacaccgac caccacgcgc tggtggcgcg agttaatggt
     4261 gtcgagcatc gaataacaga cacccgcttt cagcttaccg tgcagacctt tatcgcgcga
     4321 accgctggtg gccccggctt ccgtagtgtt acggaaatgc agcagggtca ggtcggggat
     4381 cagcgccgta acgaacgccg ccatggtggt ggatttaccc gccccgttac cgccagaaag
     4441 cgtcgtgacc agctcgtcaa ggtcaaaagt tcgggcaaaa aagccgttcc agttaatcag
     4501 cgtcagtgag cgaaatttac cgcgttcaat cattattctt cctctccgct atctggctga
     4561 ttctcttcgg tttcatcgtt gagttgcaga tgattttcaa tcggcattgc ttcgccatca
     4621 cgaatcaggc gacgctgtgc ttcacgggga tcgtcgccag cacgcacatc ggctccgaag
     4681 cggaacaccg attcggtaat gcgaaacttg ctgctgtcgt ggcccataaa ccacaccatg
     4741 cctaaacgac gcagacggtt gagcgaagaa cgtactttct cctgcaactt ctgacggtca
     4801 acgtctgaac cggttgaacg gttgttcacc agtttcagca gttttgcttc atcggccagg
     4861 gtgagcagtt cgtcgtacag ttcctgctgg gtgaaaatcc cctcattcgc cagccgttcc
     4921 gggctgagat agagataaca gaggattttc ccgaccatca tatccagttc cgacaagacg
     4981 gaacgcggga taagagtggt ggaacgtggg cgtaaataga agaacccttc cggtgcgcga
     5041 ataagctcaa cgttataacg cgcgtaaaac tcttccagat attcctgaaa atccatcagg
     5101 aatgcatgat tatccagttc gtcgaggcca atatggcggc ctgaacgtaa ggcgctgtcc
     5161 agcgccggaa ataacggatt cgccagcgcc tgcgccagct taaccggcat cacttgttca
     5221 atatttgtcg atgacatgcg cctgtacctt ggctccgtaa tcattaatcg gctgccattt
     5281 cgctggcagt ccggtgaaat ctgcttgcgc tacgccaaga cgtaccgcct gatcaataac
     5341 aatacgcgca acgtcaaagt gacgtgcacg cggatactgt gacagatatt cgcgtaccac
     5401 cagaccaaga tccagcggca cttgtctggt tttgtacacg gcaagttgtt cttcgatgat
     5461 cgccgccagc tgttcgcgga tctcgttaaa ctcttcgtat tccagatcct caggaagttc
     5521 cccagtcact tcttcatcgc gcagtgccat ctcttcgtca cgcatatcca gcagacgatc
     5581 ggcattggca taagttagcg cccacggctc atcaaaatag gtttgtaccg actgacgtaa
     5641 ccgctgagca aagacgcggt ttttatccat atcgatcgcg gtacgaataa atttgtgtac
     5701 gtggcggtcg tagccaatcc acaagtcgat ggattgctgg ccccaactga taatacgatc
     5761 gagtttgctc tgcagatcga acaccagacg atcgacgaaa tgcagatcgt catgggtcat
     5821 cgtcgcatcc tgaatgcgca acagattagc ctgcaatttg tcgcctgccg cttccagcgt
     5881 atcctgcaat tcacgcagcg ttccggaagt ttccgaaagc aacaattcac agctggaaat
     5941 cgccgcccgc cagtctttgt tcagcaactg ggcgatatcg tccttcacct gctgctgctg
     6001 ttcgtccatc agacgttgcg tcaggtcgat actgtcgaaa atttctgcta ccgaatattt
     6061 cagtggcgca tagacattac ggtgccagtg aaattcatca ccgccctctt cggcggcatc
     6121 tgctgcgcgt ttgagctcac ccgccacaat cgacaactgc atagaaagac gcagcgtaga
     6181 aaactcgcgc tgacggatgt agtagtcagt aatgccgatg ccgagcggcg tcagacggta
     6241 aattgcgttc ccttccgcct gctcgctggt aaagcggttc agcagacgtt gacgcaccat
     6301 gtcgttgatc gcgttattgg cgcgcacgcc gatggtttcg ctggtttgct caaacgcatc
     6361 actcacatgg cggaatgcat ccaccagctc gccttcactc atctcaccat ccagacgctc
     6421 gccgttcagc gtggcaaccg ccagcagaaa agagagtcgg tctacctgca gcgagatgga
     6481 gaagtcattt tttctggccc aggcaaccag ttcggggact gtctgggaaa attcactcat
     6541 actttatcct tgctctgcgg tttgcgcgcg gtgacatgaa tataacgccc cagggtaata
     6601 tacggttcct gacggcaata acgcgtttct aattcaagta atgcttcata gcagtcgcgc
     6661 tgctggtgct tctcgcgcag ataatcatga aacacgcgaa cgcctgtctt acccataatt
     6721 tgccaaccag cttcttccag ccacagataa acctgcgccg ggtcgcgtgg ataatctggc
     6781 gaaagcgtcc gttttttctt tttcggcatt cccgcctgca cgtaatcaaa attcccggcg
     6841 accatgttat gcatcaacaa accatgcgca ttgtagaaca ttaacgacaa cacgccgcct
     6901 ggacgcaaca ctgaccacag ggtctgcaat acactgcggg gatcggccac ccactcgagc
     6961 accgcatgga acaatatcag atcaacgggc gtttccaaat gcgaagcaac atcctgagcg
     7021 gcgcaatgta taaattgcat gttgtcgctc acaccttttg cttctgccgc ctgttttgcg
     7081 cggtcgatca tctgcgcaga aagatcgcat aaaatgacct gatgcccacg ctcggccatt
     7141 ttgattgcgg tctgcccttc tccaccgcca gcatccagca cacgcagttt ttgcgggccc
     7201 atttccgcca gcacgcgatc gagatcctgc cacagaatag cctgtcgaag ctgccctttg
     7261 gtggtgccgt aaatgttacg ggaaaacttt tccgcaatat catcaaaatt gcgatcctgc
     7321 attgctttct ccaccggttg gctaagacgt tttctgataa agacgctatt ttgtcacagc
     7381 cacggcgaga atgaacccgt ctggtgtaat atcgctggcg atcccttgct atatggttaa
     7441 aaaaggaacc agaaaggatg ctttttacac tgaaaaaagt gattggcaat atgttgctgc
     7501 cacttccgct gatgttgtta attattggcg ctggcctggc gctgctgtgg tttagccgtt
     7561 ttcaaaaaac cgcgaagatt tttattagca ttgggtggct ggcactcttg ttattgagtt
     7621 tgcaaccggt agccgaccgc ctgctgcgtc ccatcgaaag cacctatccg acatggaata
     7681 attcgcaaaa agtggactat atcgtggtgc tcggaggtgg ttatacctgg aacccgcagt
     7741 gggcaccgag ctctaattta atcaataaca gtctgccacg cctgaatgaa ggtattcgct
     7801 tatggcgcga aaatccggga tcaaaactga tcttcacggg aggcgtagca aaaaccaata
     7861 cggtgagtac agcggaagta ggtgccagag ttgcgcaatc gctgggcgtg ccgcgcgagc
     7921 aaattatcac cctggatttg ccaaaagata ccgaagaaga agctgcggca gtgaaacagg
     7981 cgattggtga cgcccctttc ctgctggtga cctccgcatc acatctgccg cgggcgatga
     8041 tcttttttca gcaggaaggg ttaaatcctc taccagcccc ggcgaatcag ttggccatcg
     8101 actcgccgct taatccgtgg gaacgggcaa tcccttctcc ggtctggctg atgcatagcg
     8161 atcgtgttgg ctatgaaacg cttggccgca tctggcagtg gctgaaaggt ccgtcaggcg
     8221 agccacggca agagtgattt tgatgccaga tcgaagttgc gccgactaaa tcgtccggta
     8281 ttaaccagtt gcgcaacttc atcccataac acatacaacc aacgccgcca gatgaacgac
     8341 tccgccactg gcgcgcgttg caggtaactc cagagcaaat cttccgccag agaattatcc
     8401 attagtcgga acagttcgta ttctcgcggt gcccaaagca ttagtcccgg cccgaccatc
     8461 gccagtaact gatcgctgcg cgaatctttc agcatgctgc gtaaacagaa gttaccgtga
     8521 atcaacacac aattgtcgtt aaagccttca aataatgccg ggagacattc gcgagtgcga
     8581 aacaggatcc gcttatcctg catcgtcaga ccggtgttat tgaactgatt gagcgtggtc
     8641 catagcactt caacatgttg ccggtaccat gagggccaga aatgttcctg agtattgtcg
     8701 accgcgccga cgcaaccgcg actgtcctga cggtgccagg ccagtaaggc ttcaacgatt
     8761 tggtctttga gctgttccca gcgttctggt gttcgggctg gtgcctccac cgaaacacca
     8821 cgcatccgct ccagtagcag gacatcaggg ccggggtgtt cttcatgcgt catcacacca
     8881 taaatagtcg gcatacggac agtcccactt cttgccagca tggtggtttt ccatgccagt
     8941 tgtcgggctt ttccgggcgt actaaagctt cttgccatta acggcattgg gtttccctgg
     9001 ctgtcataca aagcccacaa cgccgtatcc gctttttcat tgacgcactc aatacgactg
     9061 agtttttcgc ccagtaaatg gcttaattcg gcacgcagct gttccattca gattaccctc
     9121 ataaaagcta ctgctttcat aatgagcgcc aatataaaag atgtcacctg aatgagatca
     9181 attgttgaaa agaaaaattg aggaaaatcg taacggtacg acactcctcc caaaattggc
     9241 tgaagtgtcg tgaagtgaaa ttagcgcatt tcagcgcgaa cgcgctcaag atcttcaggg
     9301 gtatccacac ctgtgccagg aacttcctga gcaacagcaa catggatttt ttcaccgtac
     9361 cacagaacac gaagctgctc taacatttcg atgtgttcta acggacttgc ctgccagttg
     9421 acgtaacgac ggataaagcc tgcacggtag ccataaatgc caagatgacg caggaagtta
     9481 tcgccaacgg tttcaaggcc ttctgcaaaa cgatcacgat cccaaggaat ggtggcgcgt
     9541 gagaagtaca gtgcataccc ttcagcgtcg agaaccactt tcaccgcatt cgggttaaac
     9601 gcttcttccg cattgtggat tggcaccgcc agagtcgcca tacccacctg acgctgagcg
     9661 aggttatcag caacctgacg aatgattgtc gcagggatca tcggttcatc accctgcaca
     9721 ttaacgatca ccgtgtcgtc gctgaatgcg catttttcga caacttccgc cagacgttct
     9781 gttcctgact gatgatcggc gcgcgtcata catacttcac cgccagcggc ttcaacggcg
     9841 cgggcaacat cctcatgatc ggttgccacg atgatgcgct cggcacctga ttcacgcgcg
     9901 cgttcaagaa catgaacaat catgggtttg ccgttaatat caaccaatgg tttaccgggc
     9961 agacgcgtgg acgcgtagcg cgcgggaata atgaccacaa aactcatgat ttactctcat
    10021 cagcagtcag cacgcgggct tccgtttcca gcaacactgg aatgccatcg cggagcggga
    10081 aagccaggtt atccagtttg caaataagct cttgtttttc ctggttatac caaagttttc
    10141 cgttgcaaac cgggcaggca atgatttcaa gcaaacgatg atccatagtt cctccagatg
    10201 gatcgggtta tgaatgcata aatcttatca taatcattta tgcgacgggg tctatttccc
    10261 agccagtgcg gcaatcagta aagagacctt gcgggcagcg tcctaatgtc acccgcgttg
    10321 cctgctgcca gctcgcgaaa tcagtaatcg cctgacgtaa ccctttttgc agcattgtcg
    10381 ttggtttaat gccttcctgt aaccacagag agataacttc aaggatgcct gtctggcgat
    10441 gcattttggc atccattcgc ccaactaatt gcccacgatg taataatggc agaacaaaat
    10501 agccatactg gcgtttcggc gctggggtat agcactccag ccggtagcta aaatcaaaaa
    10561 gctgctctgc gcgtttgcga tcccagacaa caggatcaaa aggcgaaagt accgcgctgt
    10621 gcgttgcagt gagctttccg gccagcgcac gctcgagtag cggcagcaaa tcagcatgca
    10681 gccaaagatt gcccaatttt tcaacatgca cagcaatgat ttgctgctgt tcagccctcg
    10741 cttcgcgcca cgccgccagt gccggacgtt tcagccgata gtaatctgcc agccactgtt
    10801 cgcggaatat tcccaggcta cgcgcactgt tatccagcat gatgatttct gcttctgttt
    10861 gcgaaacgag atcgcgctca tcatcccagt caggcatgac acggtgggtt aaatcataaa
    10921 cgcgctggaa gttgcgccgt tcaatcacca tcacctttcc ggcagtaaat aaaccttcca
    10981 gatgccgttt atgcggtttc cattcccacc agccgcttgc acctttacga ggatgctcaa
    11041 aatcggctga acgtaccggc cccttatcat gaatatgctg aattaactgt gcaatttccg
    11101 cctcatgttc ctgcatccag gcgtctttgt atttccagcc cattttttca agtgccagca
    11161 tgcggtggcg aataagacga aagtcgctac gcggcataaa gcaggcttca tgcgcccagt
    11221 attccattaa ttcgccacgc gccagagact catccagcca ctgggcagga taatttccca
    11281 gacgactgaa aagcaccaga tatggactac gggcaacaat attgatggta tcgatttgca
    11341 gcaaggacat gcgggagatc gttgccggaa tatcctccaa cgacgctcga cggcggggtt
    11401 tgtttaacag gccttgtgcg gcaaggtgaa gattacgcgc atcagcaagg gagaggtgcg
    11461 gcagcgacat tcatgactcc atcaatcgaa cgctgccgcg gcgtaactag ttgccagaag
    11521 ccagcgaggt tagttgcgta agcagtttcg ctggttcatc acctgaaagc tgtgcgtcta
    11581 caggcaaata ccaccaattt tcttctgcaa aggcccggca tttcaccgca tctttttcag
    11641 tcattaccag cgtttgcccg gcgcttacca acgcactgac atccgcatgg ttcaaagact
    11701 gatgatcggc cagcggtaca catttttccg gttgtacgcc acacatcttc agcgtggcaa
    11761 aaaagcgcgg cggatgccca atccccgcca tcgccactac atgttcaagc tgagcaacgt
    11821 cacaacgcgt accggtacgt aaattcaccg cctgacccgg cagcagatgc atgggaattt
    11881 caccgctgcg agggacacca ccgttgacga ttaccgcatc aaccgacttt aagcgccccg
    11941 ctcgctcacg cattggcccc gccggcaacc accagccatt gccaaagcga cgcacaccat
    12001 caataacgac aatttccaca tcacgcgcca gacggtaatg ctgtaaaccg tcgtcggtta
    12061 cgatgatctg cacatcaggg tgttgcgcca gaatggcttt taccgcatca gaacgaacgg
    12121 gagaaaccgc aacaggcgca tcagtgcgtt gataaatcaa cacaggttca tcacccgcct
    12181 gtgctgttgt ggtatctgcc gacaataaca gcggataaga ttcagcctta ctaccatatc
    12241 cccgcgatac gacccccacg cgaataccgc gctgttgcaa ctgttccacc agccagacaa
    12301 cgaccggggt ttttccgttg ccgcctgcgg tgagattacc aaccacgaca accggtacgg
    12361 gggcacgcca ggcgcgcttc agttttagtt tatagcaaag acggatcgcg ccactcacca
    12421 ggccatacaa ccaggagagt ggcagcaata gccgccacaa aggggattca ccagaccaga
    12481 ttttttcgat cattggccaa actgcatttt gtgaagttgc gcgtaaacgc cgcggtgctc
    12541 aagcaaatcg ttatgcgtac cgcgttccac aatgacacca tcctcgacga ccacgatttc
    12601 gtctgccttt tcaatggtag acaagcggtg ggcaatcacc agagaggtac ggtttttctg
    12661 caactcatcc agtgccgcct gaatcgcacg ttcggattcg gtatccagag ccgaggtagc
    12721 ttcatccaga atcagaatcg ggctatcacg cagcaaggct cgagcgatag caatacgctg
    12781 acgctgaccg ccagagagca gcacgccgtt ttcaccaatc actgtatcga gaccgttatc
    12841 catcttattg atgaagtcca tggcgtaggc catacgcgcc gcttcttcaa tttgctcacg
    12901 gctgtactgt tcagtccgtg cgtaagcaat gttgttagca accgtatcgt taaacagatg
    12961 gacattctgc gacaccagag caacctggtt acgtaacgac gccagggtat actcgcgcag
    13021 atcgtgacca tccatcagga tttcgccttc atcaatatcg taaaaacgag tgatcaggct
    13081 ggcgatggtt gatttacctg aaccagagcg tccaaccaga gcaaccgtct tccctgccgg
    13141 aattttcagg ttgatgttac gcaatgcagg tacgtcacgt cccggataag taaaggtgac
    13201 attgcggaat tccacgtcgc cagtcgcacg ctcgatcacg cgcttacctt cgtctttctc
    13261 ctgctcactg tccagaatgg taaacagcgt ctgacaagcc gccataccgc gctggaactg
    13321 ggcgttaacg ttggtcagtg atttcagcgg acgcatcagt gcaatcattg aagagaaaac
    13381 aacggtaatc gtaccagcag tcaggctatc catgacactt gggaagctcg ccgcatacag
    13441 aacaaacgcc agcgccaaag aggcgatcag ctgaatgatc ggatcagaga tggaagaggc
    13501 tgaaaccatt ttcatcccct gaagacgcat tcggttgctg actttatcaa agcgtttcgt
    13561 ttccacttcc tgaccaccga aaatcaatac ttctttgtgg cccttcagca tttgttcggc
    13621 gctggtggtc acctgcccca tggtgttctg catgttttta ctgatgttgc gaaaacgctt
    13681 cgatactacg cgaatcgcaa tcgaaacaat cggtgccagc acaatcaaaa tgatcgacag
    13741 ttgccaactg taatagaaca tcatgatgaa caggccgatg attgacgcac cttcacgcac
    13801 aaccgttatc agtgcgccgg aagaagaaga agcaacctgt tcggaatcgt aggtaatacg
    13861 tgacaacagc gtccccgttg actgtttgtc aaaaaatgaa accggcattc ccatcatgtg
    13921 accaaacagg cggcgacgca tggtcattac cacctttcct gatacccagg agatacagta
    13981 gctggagaca tagctggtga taccacgtaa aatcatcagc ccgatcacca ccagcggcat
    14041 ccacaccagc acggagcgat ctgttttacc aaagccatca tcaagaagtg gcttaaggag
    14101 cgataacatg aaggtatcgc tggctgcgtt gaggattaac gctacgcccg ccacgatcag
    14161 acccgcttta aaaggcgcaa tggttggcca cagtcggcgg aacgtctgcc acgtagagag
    14221 atctttgtcg ttatgcattc aaaaaaccag catttgttga aatagccgca tattctaccc
    14281 gttatccact ggcacgccaa accactgatg ataccaacga ggtaaaattt gctctctgag
    14341 gctgctaatc cgccagcctt gcgctgaaaa attgaccgtc acttgaccct gatgtggagt
    14401 atcaagccat tgatatcctt gctgttgata gcgatgctta actttattag agggcaatcg
    14461 ccatgcgtta tagcgttata gcgcgatgcc gatgcgagtg ccacttttcc attcactcgc
    14521 tgaattaatg gcaacgatga tgaggtatta ctgccatggt gaggtacctg aagcaatgtt
    14581 gtctgcactt gctgccagta acggcttagc atcttttgtt cagcggggac ttcaatatca
    14641 ccggttagaa gaatgctatt cgtcccgtca taaaccttaa ccacacagga atggttattt
    14701 cctttatcgt tgctagcttg taaaggccag tgcacgctga aacgcaatcc ttgccattgc
    14761 cacgcttcgc cacgcacaca gggctgatga tgttcccagt ttaacggact tctgatccat
    14821 aacatcggcc atgtgtgcaa tattgagtcc agccctcccc ggtgatccag atgttcatga
    14881 ctcagaataa cgccttccgg ttcaagatta tgccagtgga gccaggggat aatcagttgt
    14941 tgcccactat ccccttcggg ccaggccagt cctgtgtcat agagaatcgc tttgccgttt
    15001 ctggctatca ccattgccag cccttgcccg acatcaagca tgtacacctg ccactcgtca
    15061 ggtcgaggtt tttgccacag cggccagcac atcagcaagc ctacagccac acacattgct
    15121 ggcaacgttc gccaggcgtt taatcgccat accaccagta agaaccatgg ggaaaatgat
    15181 agccattgcc aacgttcagc aatgttgatc cacccttctg gcaaactctt taacccccag
    15241 aaaagtaaag ccaaagaccg gtcggcaaga aaccataacc cttgctccag gattaacggc
    15301 ccgcttaaat gcacaaccat cgcggcgagg atcaacggaa ccgtgataaa tgtcaccaag
    15361 ggaattgcta atagatttgc aataaacgag gtcagactaa tgccatgaaa tatgacgatt
    15421 tgcacaggca taagcaggag tgtgattccc agttgcaaat gaatgaggga aacaactgca
    15481 cgcaataccg gcggcagttg ccactcagga cagggaaacc actggtacca aaaaatcagt
    15541 gccgcgaccg cagcggcaga gagccataaa ctttgcgaga gaatggcaac aggatccatc
    15601 agcaaaattg ccgccagaca acatatccat acatcccagc cactccactg tcgcccactt
    15661 aacttaagca ttccccacgt agcaagcgcc accacggtac gcaatgcagg aggttgcatt
    15721 cccgtcaacc aggcataaaa agcagcacag cagattccac caattaatgg catttgccag
    15781 tggatccagc gcccaggcag aaaaacttgc ccaccgcgaa tgagtccggc agccagcaac
    15841 gccgcaaaag cgatgtgcaa tcccgatatc gccattaaat gcgccgttcc agtatcacgc
    15901 atgatatttt tgatttcttt ggggacggat aaccgttccc ccatacctaa accaagaata
    15961 accgcattcc acatataggg ttgcagcgtt gtttgtagtg acgccagata ctgtgcacgc
    16021 aggctacaat tcggttcaat gacacttgcc tgcagaaagc ggccgatgag cggctgatgc
    16081 tgggcaatgg cataacgctg gctatcaaag ccgccatcat taagttggcc atgaactgca
    16141 cgaactttga gtttcattga ccattgttgt ccagcacaaa ccgcttgcgg aagatattcg
    16201 ccatacagca caagacctgg cgcagggaat atacgtcgac cttgtagatg agtaatttga
    16261 ccgtaatgag tggtcatgcc gtcagttgca gtgatctcaa caattgcatc ctgcgtcgcg
    16321 ccagttaagg tttctcctgc ccacaaaatt tgctttgctg ataatatgcc ccaaacgaaa
    16381 aacagcaacg tcagcgcgat ataacggacg gttttaacag ggataaatgc cagtacgcag
    16441 gcgaagagag tcagaaacgc aagggttaat gtcccaggca attggggcaa aatcagcaac
    16501 ggaaaaattc cgcaaattat gcatacgccg actgtcgtta ttttcatgca cccctccctg
    16561 tttatggaaa gtgtgcaact ttgttgagcg gttgtctggt gggaattttg cgttccccga
    16621 ggcacattca gaagaattta acgaaagggt gaaaactgct caaaactctg cgaggcagct
    16681 tccagttcct gattagagaa atgaaaaaag cacccgacag gtgcttttct cgcgttcaag
    16741 tttgagtaaa aacttaaccg taaatattgg cgcgatcgcg cagttcttta ccaggtttaa
    16801 agtgaggaac gtattttcct tccagttcta ctttatcgcc agtcttcgga ttacgtccgg
    16861 tacgtggtgc gcggtagtgc aaagagaaac tgccgaaacc gcggatttca atacgctcgc
    16921 cctgcgcaag agtcgaggcc atatgctcca gcatctcttt tactgcatct tcaaccgtct
    16981 tggcgggaat gtgcgattgc tgggtggcaa gtctttctat caattctgac ttggtcatga
    17041 ttcctccggt tccttaaagg caaattaagc ggctgctgtt gctgcattga ttaagggcgg
    17101 ccgtagccgc ccttagtgct tgattacagg acgaaacctg caatctgtca agtaaactca
    17161 acaaacttcg gaataaaaat cccgaagagt cagagaatta ctcgccttta gctgctttga
    17221 aagcttcagc cattgcgttg ttggagaagt ttgcatcttc ctgtttgtta acagttgcga
    17281 ttgcatcttt ctcgtcagct tcgtctttcg cacgaacaga caggctgatt gcgcggtttt
    17341 tacgatcaac gccggtgaat ttagcttcaa cttcgtcgcc aacgctcaga accagggtag
    17401 cgtcttcaac gcggtcacgg gatgcttcag aagcacgcag gtaaccttca acgccgtcag
    17461 ccagttctac ggttgcgcct ttagcgtcaa ctgcagttac tttaccggtt acgatagcgc
    17521 ctttcttgtt cagagcaacc cagttgttga acggatcttc tgcgagctgt ttaacgccca
    17581 aggagatacg ttcacgttct gcgtcaacct gcagaacaac tgcagcgatt tcgtcgcctt
    17641 ttttgtattc acgaactgct tcttcgcctg caacgttcca ggagatgtca gacaggtgaa
    17701 ccaggccgtc gatgccgccg tctaggccga tgaagatacc gaagtcagtg atagacttga
    17761 ttttaccttc aacacggtcg cccttgttgt gggtttccgc gaactgctgc cacgggttag
    17821 ctttgcactg tttcagaccc agggagatac gacgacgttc ttcgtcgata tccagaacca
    17881 taacttccac tacatcgcca acgttaacaa ctttggacgg gtggatgttt ttgttggtcc
    17941 aatccatttc ggaaacgtgt accaggcctt caacgccttc ttcgatttca acgaagcagc
    18001 cgtagtcggt caggttggtc acgcgaccag tcagtttggt accttccgga taacgtttag
    18061 cgatagctac ccacggatct tcgcccaact gtttcaggcc cagggataca cgggtacgtt
    18121 cgcggtcgaa cttcagcact ttaacagtga tttcgtcgcc cacgttgacg atttcgctcg
    18181 gatgcttaac gcgtttccag gccatgtcag tgatgtgcag caggccgtca acgccgccca
    18241 gatcaacgaa tgcaccgtag tcagtgaggt tcttaacgat acctttaact tccatgcctt
    18301 cctgcaggtt ttccagcagc tgatcgcgct ctgcgctgtt ttcggattcg ataacggcac
    18361 gacgagaaac aacaacgttg ttgcgcttct gatccagctt gattacttta aattcaagct
    18421 ctttgccttc caggtgcaga gtgtcacgca ccggacgaac gtctaccaga gaacctggca
    18481 ggaacgcacg aataccgttc agctcaacag tgaagccgcc cttaactttg ccgttgataa
    18541 caccggtaac agtttcagca tcttcgtaag ctttttccag cgtgatccag gcttcgtgac
    18601 gtttagcttt ctcacgggac agcagagttt caccgaagcc gtcttctact gcgtccagag
    18661 caacgtcaac ttcgtcacct acctggattt ccagctcgcc ctgggcgttt ttgaactgct
    18721 cagccgggat ggcggactca gatttcagac cagcgtcaac cagtactacg tctttgtcga
    18781 tagcaacaac aacgccacga acgatagaac ccgggcgggt ttcgatttct tttaaggact
    18841 cttcaaagag ttgagcaaaa gattcagtca tgtttaatct tcaggtttat atttaacgtc
    18901 cacctggctc catgccggat ggggttgttt aacatacccg ctgtcattcc attgcaacgg
    18961 gggtactgca aattcggtcg cttatgcgag agccaatttc tggcgcgcgt attgtagcgc
    19021 tttttcaatc acttgctcaa tgcttaaggt ggtggaatcc aacactaaag catcggctgc
    19081 cggaaccagt ggcgctaccg ctcggttacg atcgcggtcg tcgcgttctt tgatctcggc
    19141 caaaaggcgc tcaaagttaa cactaaagcc cttctcctgc aactgtagca tgcggcgatg
    19201 cgcacgttct tccgaggagg cgtcaaggaa aattttcact ggtgcatcag ggaataccac
    19261 cgttcccatg tcgcggccat cggcaatcag acctggtaat tcgcgaaacg cgcgttggcg
    19321 acgcaataat gcttcacgaa cgcgtgggaa tgtcgcgact tgtgaagccg cattcgccac
    19381 ttcctgagta cgaatttcgc cgctgacatc ttccccttcg aggatcactt ccagattgcc
    19441 attggttgac acaaaacgta catccagatg ggatgccagc ggtaccagcg catcttctga
    19501 cgcaacatca acatggtgat gtaatgccgc caatgccagt acgcgataaa ttgcacccga
    19561 atccagcaga tgccattgca atgcttccgc catagcctta cacaaggtgc ctttccctgc
    19621 accgcttggg ccatcaatgg taataaccgg ggcaattgcc gtcatcttta tctccttaaa
    19681 acaggcgtac cgttaacata accgcgcgca ttatacgcgc cgacgccaca aatcgttaac
    19741 gttgtgtgca aaaaccagtt ttgtctgtat tcagatgggg atttattgcg caattatagc
    19801 gggctggcag aagaccagcc cgaaagatga caatgattta cttaccagag gcgatacgat
    19861 cacggatgtg ttgcgcacgc tctgttgatg gtgggggaga gtcaaacatg gactgggtgc
    19921 gaccgccatc cagactagcc agtttttcaa agctgccaac cagcccctag gtgctgatgc
    19981 cacgtttctt caacagatca aaggagaaat catctgcttc ggactcttta tcacgggagt
    20041 atttagcatt aatagcgcct tctgcgatat cacccaattg tgagcgggaa agctgggaag
    20101 ccacaccgct ggtagctgaa atggcatcgc gtgcggcaac gatcgcataa gaaactttca
    20161 tttcagccag cgagtgaccc aacgcgacgt ggcccagttc atggcccaga acaccttcaa
    20221 tttcgttgtc attcatcatg tccatcaggc cactgtagac acggacacag ccgttcgcca
    20281 tcgcccatgc gttgacgtcg ctggtcatat aaacctatag ttgaccggcg tgccattaat
    20341 attgttaccc aatgctttgg cgatttttgc cagacgttta ccgtacttgc tggatttact
    20401 tgcgacttga ttgccgctgt ccatttcggc acagccctga ttggcaatcg cttttgcatc
    20461 ggcatcgctt aatgttgctg ctttataggc atttaaaccg gagctgatag ccatattggt
    20521 atcaataccg tgggtatttt gacaccctgt cagtaatgct gcagaggtcg caatcgccag
    20581 cagtaattta gtattcttca tgtgaatcat ccgttgatta atcatatata aacattatgt
    20641 atcaacaact tacattgaca agcgacgcta ccattaatca aaatgactca caaggtccga
    20701 aaaaaaacgc cgacaatgtg
//
LOCUS       DADKRT010000065        20656 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.066, whole genome shotgun sequence.
ACCESSION   DADKRT010000065 DADKRT010000000
VERSION     DADKRT010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20656
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.066"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..876
                     /locus_tag="JQ356_001988"
     CDS             <1..876
                     /locus_tag="JQ356_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4622091.1"
                     /translation="DQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQ
                     YGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKG
                     FSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTN
                     IINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAED
                     GGFTLEINGSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQP
                     KLRGNVQTAQREVAP"
     gene            873..1238
                     /locus_tag="JQ356_001989"
     CDS             873..1238
                     /locus_tag="JQ356_001989"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HAY4622092.1"
                     /translation="MRNRLIAAILGLFGTLTGVQAAPDVTSEITYDLASGRADYYFWK
                     DEASAGNNGYMWYECSYPDLQQTCTANGNISTVQIYLTEQRSGMRWPVKLKGFKTAIV
                     SSDEAPLGCKGGQRASDES"
     gene            1330..1962
                     /locus_tag="JQ356_001990"
     CDS             1330..1962
                     /locus_tag="JQ356_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein CblD"
                     /protein_id="HAY4622093.1"
                     /translation="MKNLPIGGVWKGKVKLHSNSPAQDYFANITLNTLDPNHIDVFFP
                     EFAHATPRVQLDLHPTGSVNGSNYAQDLTMLDMCLYDGFNGNAISYEIMLKDEGRPAA
                     GRRDGDFSIYRQGGTSTDEGERIDYRVKMYNPETGGQIDVRNNENMVWNSINLKSVRP
                     VVLPGIRYAVMCVPTPLALAVDKFSVMDKQAGYYMGKLSVIFTPSLPTIN"
     gene            complement(2050..3348)
                     /locus_tag="JQ356_001991"
     CDS             complement(2050..3348)
                     /locus_tag="JQ356_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4622094.1"
                     /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST
                     QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSRGGLA
                     IARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
                     HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM
                     SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA
                     DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
                     GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFSLVVGALADTIGFSP
                     LFAVLAVFDLLGALVIWTVLQNKPAIEVAQESHNDPAPQH"
     gene            3831..5243
                     /gene="uxaC"
                     /locus_tag="JQ356_001992"
     CDS             3831..5243
                     /gene="uxaC"
                     /locus_tag="JQ356_001992"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HAY4622095.1"
                     /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
                     YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
                     WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
                     IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
                     QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK
                     TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
                     SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
                     QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
                     EMVKNICFNNARDYFAIELN"
     gene            5258..6745
                     /locus_tag="JQ356_001993"
                     /pseudo
     CDS             5258..6745
                     /locus_tag="JQ356_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199350.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
     gene            6828..7379
                     /locus_tag="JQ356_001994"
     CDS             6828..7379
                     /locus_tag="JQ356_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HAY4622096.1"
                     /translation="MTAYWLAQGVGFIAFLIGITTFFNRDDRRFKKQLSVYSAVIGVH
                     FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
                     TIVSTRALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
                     RMQKRGIDPFKVEKTPPAVDERG"
     gene            complement(7384..8628)
                     /gene="sstT"
                     /locus_tag="JQ356_001995"
     CDS             complement(7384..8628)
                     /gene="sstT"
                     /locus_tag="JQ356_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HAY4622097.1"
                     /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
                     LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
                     FALRHGNETTKNLVNDLSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL
                     LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDDRLANSALRN"
     gene            complement(9244..10209)
                     /gene="alx"
                     /locus_tag="JQ356_001996"
     CDS             complement(9244..10209)
                     /gene="alx"
                     /locus_tag="JQ356_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001098790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family membrane protein Alx"
                     /protein_id="HAY4622098.1"
                     /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
                     SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
                     AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINARVNYRHDKQRGE"
     gene            complement(10492..11478)
                     /locus_tag="JQ356_001997"
     CDS             complement(10492..11478)
                     /locus_tag="JQ356_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311996.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY4622099.1"
                     /translation="MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFAN
                     DFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAE
                     VDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL
                     DGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMD
                     YGDFSVTLLHSKVSDSVLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHI
                     NTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL"
     gene            complement(11557..12240)
                     /locus_tag="JQ356_001998"
     CDS             complement(11557..12240)
                     /locus_tag="JQ356_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HAY4622100.1"
                     /translation="MQPRLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQL
                     TWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDE
                     ASGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
                     AKQYSIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHSQPKYLGPSVMIGPF
                     SEHGCPAKE"
     gene            complement(12317..12820)
                     /locus_tag="JQ356_001999"
     CDS             complement(12317..12820)
                     /locus_tag="JQ356_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY4622101.1"
                     /translation="MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD
                     KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL
                     SLGQDKI"
     gene            12905..14041
                     /gene="rlmG"
                     /locus_tag="JQ356_002000"
     CDS             12905..14041
                     /gene="rlmG"
                     /locus_tag="JQ356_002000"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HAY4622102.1"
                     /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
                     RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
                     YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG
                     PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM
                     PEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING
                     ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR"
     gene            14326..14640
                     /locus_tag="JQ356_002001"
     CDS             14326..14640
                     /locus_tag="JQ356_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA interferase HigB"
                     /protein_id="HAY4622103.1"
                     /translation="MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAV
                     FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG
                     KK"
     gene            14637..15053
                     /gene="higA"
                     /locus_tag="JQ356_002002"
     CDS             14637..15053
                     /gene="higA"
                     /locus_tag="JQ356_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HigA"
                     /protein_id="HAY4622104.1"
                     /translation="MIAIADILQAGEKLTAVVPFLAGIQNEEQYTQALELVDHLLLND
                     PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLADLPEIG
                     SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID"
     gene            complement(15098..17116)
                     /locus_tag="JQ356_002003"
     CDS             complement(15098..17116)
                     /locus_tag="JQ356_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HAY4622105.1"
                     /translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY
                     AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
                     LHTGRYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVE
                     VMGSEGYLINEFLTLHTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM
                     LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL
                     KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINT
                     CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN
                     AAARGHQVTLFDAHSESGGQFNIAKQIPGKEEFYETLRYYHRMIEVTGVTLKLNHTVT
                     ADQLQAFDETILASGIVPRVPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
                     DTAMYLSQPGESTSQNIARFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
                     KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC
                     AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELNARRAIAQGTRLALEI"
     gene            complement(17542..19893)
                     /gene="ygjK"
                     /locus_tag="JQ356_002004"
                     /pseudo
     CDS             complement(17542..19893)
                     /gene="ygjK"
                     /locus_tag="JQ356_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417551.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
     gene            complement(19910..20656)
                     /gene="ygjJ"
                     /locus_tag="JQ356_002005"
                     /pseudo
     CDS             complement(19910..20656)
                     /gene="ygjJ"
                     /locus_tag="JQ356_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417550.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgjJ"
BASE COUNT         5034 a         5414 c         5431 g         4777 t
ORIGIN      
        1 gatcaaacgt catggcagtt atcgcatacc ttttataatg attcattcag ccataaagaa
       61 cttggcgtaa ccgtcggagg cctgaacacc gataccataa acagcgcggt taacgggcgt
      121 tgggatgggc aatacggaaa tgtctacgct accgtatctg atagttatga ccgtaagaat
      181 catgatcatc tttcggcctt tacgggcact tatagctcta cgctggctgt cagtcgctat
      241 ggcgttaatt tgggagccag tggtacagac gatttgctgg gtgcggtatt ggtggatgtg
      301 aaaggcttct ctgaacagga tgaagagagt caggatctgc aactcgaagc gcgggtggca
      361 ggcagccgaa ctttgcagct tggtcaaagc gacagtgtgt tgttccctta tcctggattt
      421 cagtctggtt ttgttgaggt taacgacagt agccagggca atcagcaggg gacaacaaac
      481 atcattaacg gtgcagggaa tcgtgaatta atgttgttgc ctggcaagct gcgctatcgc
      541 gaagtgtctg ccagctttaa ctacaactat atcggtcgtt tattactgcc ggcagcggtg
      601 aaaaaattcc cgattgtggg gctgaacagc gccatgttac tggtagctga agatggcgga
      661 tttacacttg aaattaacgg cagcgaaaaa gagctctatc tgctttccgg gcagcaattc
      721 cttaagtgtc cactgagtgt tgaaaagaaa cgcgccagca ttcgttacag cggagatgtt
      781 acttgtagtg tggtgactta ttcacaatta ccggagttga aacagcctaa attacgtgga
      841 aacgttcaga cggcgcaaag ggaggttgca ccatgagaaa tcgattgatt gcggcgatat
      901 tgggcttgtt tggcacgctc actggcgttc aggcagctcc tgacgtgacc agtgaaatta
      961 cgtatgattt ggcatctggt agagcggatt attacttctg gaaggatgaa gcgtcggcag
     1021 gaaataatgg atatatgtgg tatgaatgtt cgtatcctga cctccaacaa acctgtacag
     1081 ctaatggaaa tatatcgaca gtacaaatct atttaactga acaacgcagt gggatgcgtt
     1141 ggccggtaaa actcaaagga tttaaaacag ccattgtaag tagcgatgaa gcgccgctag
     1201 gatgcaaggg ggggcaaagg gcttcagacg aatcttaagg attctaatag atcttcatgt
     1261 acagaagatg gtcaacatta ttatatatac gatacaaagt ttcttacgct ctaccttgag
     1321 cagacagaga tgaagaattt gccgattggt ggcgtctgga aggggaaagt taaattacat
     1381 tcgaacagcc cggcccagga ctatttcgca aatattaccc tgaatacgct cgaccccaac
     1441 catattgacg tgttcttccc ggagttcgcc cacgccacgc cgagggtgca gttagacttg
     1501 catccaacag gaagcgttaa cggcagcaac tacgcgcaag atctgaccat gttggacatg
     1561 tgcctgtacg atggttttaa cggtaatgcc atcagttatg aaatcatgct caaagatgaa
     1621 gggcgaccag ctgcagggcg cagagacggt gacttctcta tctatcgtca gggaggaacc
     1681 tctaccgacg agggagaacg cattgattac cgggtcaaaa tgtacaaccc ggaaaccggt
     1741 gggcaaattg atgtgcgcaa taatgaaaat atggtctgga acagcattaa cctgaaaagt
     1801 gtgcgtccgg tggtactgcc cggtattcgc tatgccgtga tgtgtgtgcc gacacccttg
     1861 gctctggcag tcgataaatt cagcgtgatg gataaacagg ccgggtacta catgggcaaa
     1921 ttgtcagtaa tctttacgcc ttccttgcca accatcaatt aaccctgcaa agcggacaaa
     1981 cgcttttttc tatataaacg acgaagccgc ctgataaggc ggcttcgtcg ttataactta
     2041 cgttaaacgt taatgttgcg gtgcgggatc gttatgtgat tcctgcgcta cctcaatcgc
     2101 cggtttgttc tgcaacacgg tccagataac cagcgcacct aacaggtcga acactgccag
     2161 tactgcgaac agcgggctga agccgatggt gtcagccagt gcaccgacaa ccagcgaaaa
     2221 cagcgtactt gccagccatg cggacatccc ggttaaaccg ttcgccgtcg ccacttcgtt
     2281 acgaccgaac acgtcagaag agagcgtaat cagcgcgcca gacagtgcct ggtgagcaaa
     2341 accaccgata cacagcagca taattgcgac atacgggttg gtgaacaggc cgatcatacc
     2401 cgggccaatc atcagcactg cacccagcgt tacgaccatc ttacgggaaa cgatcaggtt
     2461 cacaccaaac caacgctgga acagcggcgg caggtaacca ccgaggatac aaccgaggtc
     2521 agcaaacagc atcggcatcc aggcgaacat cgcgatctct ttcaggttaa agccgtaaac
     2581 tttaaacatg aacagcggga tccacgcgtt aaaagtaccc caggctggtt ctgccaggaa
     2641 acgcggcagc gcgatacccc agaactgacg gttacgcagg atctgaccaa cggacatttt
     2701 cttcgccgtg ctcacctggt gctgggcttc ctgaccatta ataatatagt cgcgttcttc
     2761 atcggtcaga tgcttctggt cgcgcggatg tttatagaaa atcagccatg ccatcgccca
     2821 gataaagctc aatgcaccgg agatgataaa tgccatctgc cagctgtgca ttacgattgc
     2881 ccataccacc agcggcggcg caatcatcgc accaatcgaa gaacctacgt taaagtaacc
     2941 taccgcgatg gaacgctctt tcgccgggaa ccattcggag ctggctttca gacccgccgg
     3001 gatcatcgct gcttccgcgg caccgactgc accacgagca atcgccaggc cacccctgct
     3061 accagccagc gcggttgcac cacagaatac ggcccacagt acagcaaaca ttgcataacc
     3121 gattttcgta cccagcacat ccagtacata gcccgctacc ggttgcatga ccgtataagc
     3181 agcagaatag gctgcgatga tataggaata ctgttgggtg gagatgttta actcttccat
     3241 cagagttggc gcagctgccg ccacagtgtt acgcgtcagg taaccaagca cggtgccaag
     3301 cgtcaccagt gcgatcatat accaacgtaa ccctttaatt ttacgcatgt aaaacctcat
     3361 cgttttgtta tatccgcagg aagcgcggcc atcatcccgc cagaggctga agatgttagt
     3421 tacgaccggg taaccgaaaa aaaaccggca cgccccgaac gttgccatga aagtttcgtg
     3481 ctaattcggc ttccgtaccg gttaacccga ttcatctaac aaatgaatga atcggcaatt
     3541 tgcattccgt cgacttatga tttgcgacgg cagaaagatg acttgtcata caactttaaa
     3601 aggtgagagc catcataaat gtgcgaatat ttgtagggac attacctgac gacagcgagg
     3661 ccagtactgg cgcggcctgc agcgagattt accactttga gagtaatttt tttaactacg
     3721 tttattgatc taactcacga aaatatcttc ggactctgga aattggtgtg ataactttgt
     3781 cagcatcgca ccataagcaa gctagctcac tcgttgagag gaagacgaaa atgactccgt
     3841 ttatgactga agatttcctg ttagataccg aatttgcccg ccgtctgtat cacgactacg
     3901 caaaagacca gccgattttc gattaccatt gccatttgcc gccgcagcag attgcggaag
     3961 actatcgttt taaaaacctg tatgacatct ggctgaaagg cgatcactac aaatggcgcg
     4021 ctatgcgtac caacggtgtg gccgagcgtc tgtgtaccgg tgatgcgtct gaccgtgaaa
     4081 aatttgacgc ctgggcggcg actgttccgc acactatcgg caacccgtta taccactgga
     4141 cgcacctcga actgcgtcgt ccgtttggta tcactggcaa attgctttct ccgtcaactg
     4201 ccgatgaaat ctggaacgaa tgtaacgaac tgctggcgca ggataacttc tccgcgcgcg
     4261 gcatcatgca gcagatgaac gtgaaaatgg tcggcaccac cgatgacccg atcgattctc
     4321 tggagcatca cgcagagatc gccaaagacg gctctttcac catcaaagtg ctgccgagct
     4381 ggcgtccgga caaagccttc aacatcgaac aggcgacctt taacgactac atggcgaagc
     4441 tgggcgaagt ttccgatacc gacattcgcc gctttgctga cctgcaaact gccttgacca
     4501 aacgtctgga tcacttcgcc gctcacggct gtaaagtgtc tgaccatgcg ctggacgtgg
     4561 tgatgtttgc tgaagcgaac gaagcggaac tggacagcat tctggcgcgc cgtctggctg
     4621 gcgaaaccct gagcgagcac gaagtggcac agttcaaaac tgcggtactg gtgttccttg
     4681 gtgccgaata tgcacgtcgc ggctgggtac agcagtacca cattggcgcg ctgcgtaata
     4741 acaacctgcg tcagttcaaa ctgctggggc cggatgtagg ctttgactcc atcaacgacc
     4801 gtccgatggc agaagagttg tctaagctgc tgagcaagca gaacgaagaa aacctgctgc
     4861 cgaaaaccat tctgtactgc ctgaacccgc gcgataacga agtgttgggc accatgatcg
     4921 gtaacttcca gggcgaaggt atgccgggca aaatgcagtt cggttccggc tggtggttta
     4981 acgatcagaa agacggtatg gaacgtcaga tgacccaact ggcgcagctc ggtttgctga
     5041 gccgctttgt cggtatgctg actgacagcc gtagcttcct gtcatacacc cgtcacgaat
     5101 acttccgccg cattctgtgc cagatgatcg gtcgctgggt ggaagcgggc gaagcaccgg
     5161 cggacatcaa cctgctgggc gagatggtga aaaatatttg ctttaacaat gcgcgtgact
     5221 acttcgccat tgaactgaac taaggtctgg ggttgatatg caatacatca agatccatgc
     5281 gctggataac gtcgcggtcg ctttagcgga tttggctgaa ggcacagaag tcagtgtcga
     5341 taaccagact gttacgctgc gccaggatgt tgctcgtgga cataaatttg cgttaacgga
     5401 tatcgcaaaa ggggccaatg tcatcaaata tggcctgccg attggttatg cattggcgga
     5461 tattgcggcg ggggaacacg tccacgccca caatacgcgc acgaatctga gcgatctgga
     5521 tcagtatcgc tatcaacctg attttcagga tctgcctgcg caagcggcag atcgtgaagt
     5581 gcagatctat cgtcgcgcta acggcgatgt cggggtgcgt aacgagctgt ggatcctgcc
     5641 aaccgtgggc tgtgtcaacg gcatcgcgcg gcagatccag aaccgttttc tgaaagagac
     5701 caacaacgct gaaggtaccg acggcgtgtt cctcttcagc cacacctacg gctgctcaca
     5761 gctgggcgac gatcacatta atacccgcac catgctgcaa aacatggtgc gccacccgaa
     5821 cgcaggcgca gtgctggtga ttggtctggg ctgtgaaaac aactaggttg ccgcattccg
     5881 tgaaacgctg ggcgatatcg atcctgaacg cgttcatttc atgatctgcc aacagcagga
     5941 tgatgagatc gaagccggga tcgagcattt gcatcagctg tataacgtga tgcgcaacga
     6001 taaacgcgag ccaggcaaac tcagcgaact gaagtttggt ctggagtgcg gtggttctga
     6061 cggtctttct ggtattactg ctaacccgat gctggggcgt ttctctgact acgtgattgc
     6121 taacggcggt actaccgtac tgaccgaagt gccggagatg tttggcgcag agcagttgct
     6181 gatggaccat tgccgcgacg aagcaacgtt tgaaaaactg gtcaccatgg tcaacgactt
     6241 taaacagtac tttattgccc atgatcagcc gatctacgaa aacccatcac cggggaacaa
     6301 agcgggcggt atcaccacgc tggaagacaa atcacttggc tgtacccaga aagcgggttc
     6361 cagtgtcgtg gttgacgtgc tgcgttacgg cgagcgtctg aaaacgccag ggctgaactt
     6421 gttaagtgcg ccgggtaacg atgccgtagc gaccagcgcc ctggcgggtg cgggctgcca
     6481 tatggtgctg ttcagtactg gtcgcggcac gccatacggt ggatttgtgc cgacggtgaa
     6541 aatcgccacc aacagtgaac tggcggcgaa gaaaaaacac tggctcgact ttgacgcggg
     6601 tcagctgatc cacggtaaag cgatgccgca gttgctggaa gaatttatcg acaccatcgt
     6661 tgagtttgcc aacggtaaac aaacctgcaa cgagcgtaac gacttccgcg aactggcgat
     6721 cttcaaaagc ggcgtaacgc tataaagtcg aaatgagttg ttaataaaaa acggcgtttc
     6781 ataatgtgaa gcgccgtttg cttttccata cctgataagg atttatcatg accgcgtatt
     6841 ggctggccca gggcgtgggt ttcatcgcct ttctgattgg tatcacaaca tttttcaatc
     6901 gtgacgaccg tcgcttcaaa aagcagcttt cggtctatag cgccgttatt ggcgtacatt
     6961 tttttcttct gggcacctat cccgctggtg ccagtgccat ccttaatgcc attcgtacat
     7021 tgattacctt acgcacgcgc agcttatggg taatggcgat ttttattgtg ctgactggcg
     7081 gaattggcct cgcgaagttc catcatcctg tcgaactatt gccggttatc ggtacgattg
     7141 tcagtaccag ggcgctgttc cgctgtaaag ggctcaccat gcgctgcgtg atgtggtttt
     7201 caacgtgttg ctgggtgatt cacaacttct gggcggggtc gataggcggc acaatgattg
     7261 agggtagttt tctgcttatg aatggcttga atatcattcg tttctggcgg atgcagaaaa
     7321 ggggaattga tccgtttaaa gtagagaaaa cccctcccgc cgtagacgaa aggggttaaa
     7381 caattaatta cgcagggcgc tatttgccag acgatcgtct tccgcctggc aagctgccgc
     7441 agtgaacagc acgtcagttg aagagttcag cgcggtttcg caagagtcct gcaatacgcc
     7501 gatgataaag ccgacggcaa ccacctgcat ggcgatatcg ttcgaaatac cgaacatatt
     7561 acaggccagc gggatcagca gcagagaacc ccccgccacg ccggatgcgc cacaggcaca
     7621 cagagaagcc accacgctca acagcagcgc cgtgggcaga tcgaccggga tacccagcgt
     7681 attaaccgca gccagcgtca acacggtaat ggtgattgct gcgcccgcca tattgatggt
     7741 ggcacccagc ggaatagaaa cggaataggt atcgcgatcc agattcagct tttcacacag
     7801 tgccatattc accggaatgt tcgccgcaga gctgcgggtg aagaaggcat acacgccgct
     7861 ttcgcgcagg cacagcagca ccagcgggaa cgggttacga cgaattttcc accacaccag
     7921 caatgggtta accaccagcg ccaccagtaa catacagcca accagcacga ccagcagttg
     7981 cgcgtagccc cacagtgtgg agaaaccggt ggttgccagg gtagaagaaa ccagaccaaa
     8041 aataccaatc ggtgcgaagc gaatgaccag tttcaccata aaggtgacgg cattcgacag
     8101 atcgttgacc aggtttttgg tggtctcgtt accgtgacgc agtgcgaaac cgaggccaat
     8161 tgcccacacc aggatcccga tgtagttacc tttcagcagc gcgtcgatgg ggttggaaac
     8221 catgctcatt accagcccgc gcatcacttc tacaatgcct gacggtggcg aaatatcacc
     8281 cgcgctactg gataagtgca gggtagaagg gaaggcgaag ctgaaaacga ctgcggccag
     8341 agcagcagag aaggtaccca gcagatagag gaacaaaata gggcggatat tggttttctg
     8401 cccgtgctgg tggttagcaa tagatgccat caccagcatc aacaccagga tgggggcaac
     8461 ggctttcagt gcgccgacga acaaagtacc taacagacca acagcttccg ccgcgggttt
     8521 tgagatccat gccagaagaa tccccagaac aaggccgacc aggatttgtt ttaccaggct
     8581 gccatgagcc agacgccgga atagccccgg tgaacgttgc gtagtcattt ttcgatcctt
     8641 tcattgtgtt gtcgcacatc cctggtgcgt tctgtcgacg catctttcag gatgtaacaa
     8701 agtgtttgca aggtcgagta taaggaaagt tacagcttcg ggaagcgaaa aatgctggat
     8761 tttaaagaga ggtcatattt tgcaacttaa ttgttacatt tgtttgacat aaacagaggg
     8821 aaggactggc tactaaggct gattagataa catatgggca aaactatttg gaatatgaga
     8881 acggttgcgc tcctttaatg tgctatgcca tataaagtca ctggcgcagg gagcgcgcag
     8941 ggggcagcca atcgccgccg ccccctgcac ccccaggctc tggcgaacaa aatcgccgct
     9001 gcgcgattcc ctcagcttat cccttgcggc taccgggtcg ggcgcaaggg aacgtccctg
     9061 taagatgcgc cctcgccgcg catccatgcg cgtcgccccg gcctccaggg aacgcttcgg
     9121 cgattttgac gccaccaaca cccgtgcggt ctttttgtaa agagctacaa gccaattaca
     9181 taattaatag ctcacctttg tctgggatga gttatctcta ggaatggctt aatatacagc
     9241 gaatcattct ccccgctgct tatcatgccg ataattcacc ctggcgttga taataaacgt
     9301 catcaccaga atgccaaaca ccacgcccag cgagacggcg attggaatat ggtagaagtc
     9361 gacaatcagc atcttgatac cgataaacac caggatcacc gccaggccat atttgagcat
     9421 cgagaaacgc tctgctacgc ccgccagcag gaaatacatc gcacgcaggc cgaggatcgc
     9481 aaacaggttt gaggtcagca caatgaacgg gtcagtggtc acggcgaaga tagccggaat
     9541 gctatccacg gcgaaaatca cgtcgctcaa ttccaccaga atcagtacca gcatcagcgg
     9601 tgtggcgtac agcaatccat tcttacgcac aaagaaatgc tcgttgtcga tggtgtcggt
     9661 catgcgcaaa tgaccgcgta gccagcgcac cagcggcttg tcgccaatgc ctgattcatc
     9721 ttcatgggcg agcgccatct tcacgccggt aaacagcagg aaggcaccga agatatacag
     9781 gatccagtcg aactgcgaaa ttagccagct gccagtgaag atcatgatgg tacgcagaac
     9841 aatcgccccg agcacgccat acaccagcac gcggcgttgt aatgccgccg gaacagagaa
     9901 atagctgaac aacatcagcc agacaaagac gttatcgacc gccagcgatt tctcaatcag
     9961 ataacccgtg agaaaggcca gtgcctgtgg atcggcaacg gcgcgacctt cggtttgcac
    10021 cagataccac cagaaagcgg cgttaaacag taacgacagc gtcacccaaa ccagcgacca
    10081 ggccgcagcc tgtttcatgg tcatggcatg tgccccacga cgcccctgca acaacaggtc
    10141 gatagccagc ataatggcga caacaacagc gaatccgccc catagcaacg gcgtgccgac
    10201 agtattcata gaagttcctt acacataaaa aaaacggcca acgtcggaag acgtcagccg
    10261 ctgcttttta tgcatagacc tcgccttccg gcaaggtctc acttacaaca aaaaaggaat
    10321 acgtctgcgt attcctttcg ggttgcccgg tgaccggatg tggtttttca cacatcgtaa
    10381 tgacgatcga ccggcaatga agttactccc ctttgcaggt aacaaagtat gacagccatt
    10441 cagccagtca atggtctgtt acataccttt tacactgttt tactttggca attatagttt
    10501 tacgctatct gccggaaaaa tcaccccagt ctggcggcgg atctcagtca gcagtttggc
    10561 ggtgatgcga ctgaccgcca gccctggatg atccaccaga tgctcatcca ccagggtagc
    10621 aaacagctct gcttcgtaga gcatggtatt aatatgctgc ggctgggtga gatcctgcat
    10681 ctggctgcca cgcggcacga agcacacttt ctggcattca gacagttttt caatcaccag
    10741 cgatcccgct tcgccctgaa tctcgctttc caggacagaa tcactgacct ttgagtgcag
    10801 caacgtaacg ctgaaatcac cgtaatccat caccaccacg ccgtgggcat ctacgccgct
    10861 tgccaacaaa ctggcggttg cctgcacgct tttcggttca ccgaataatg ccaccgccga
    10921 cgccaggcag taaaagccga tatccataat tgaaccgtta gagaatgccg gattaaaggt
    10981 gttgggattc tcaccatcca ggtaacgttg ataccgcgag gaatactggc aatagttgaa
    11041 aaagacttta cgcaatttgc cgactttcgg cagcgcctgg cgcagcaaat gaaagttcgg
    11101 caggctggcg gttttaaatg cctcaaacag caccacctga ttttcccgcg cacaggcaat
    11161 ggcggcatcc acttccgcca gattcgacgc cagtggtttc tcgcaaatca catgaatttt
    11221 atggctaagg aaaagttgtg tctgggaaaa gtgcagggca ttcgggctgg caatatacac
    11281 cgcgtcaatg gcatcgcttt ccgccatcgc ttccagcgag gtaaacagat gctcgacaga
    11341 aaaatcattg gcgaagtgct gggcctgttc aaggctgcgg gaatatacgg cggttaactt
    11401 gtatttaccg ctctcatggg cggcctcgac gaactggcga gtgatccagt tcgtaccaat
    11461 cacagcgaaa cgtatcataa cgcgtggata ctccataaag ggattctgtc gtcaatgtag
    11521 cacgcctttt tcatcttcga cgtgcgcaga tacgcattat tcttttgccg gacagccatg
    11581 ctcactaaac ggcccaatca tgaccgatgg cccgagatat ttcggctggc tatggaggat
    11641 tttggcgtca atcacggcgc tgacacgagc gagtttctct cgcagttgag tataaaaacc
    11701 gtgcttcata ttgaggtcag gcgcgttaaa accgatagcg tcgatgctgt actgttttgc
    11761 cagccagatg gcgcgttggt tatgaaattc ttgcgagata atggtgatat ggttttcacc
    11821 aaaaaccttt ttggcacgca ctaccgaatc cagcgttgag aatccggcat agtcgcagaa
    11881 gatcactttc gccggtacgc ctttagcgat caaagccttc tgcatacctg atgcttcatc
    11941 gtaattttta cgtccgttat cgccacttac cagtagccat ttcacttttc cggcgtggta
    12001 caacgctgct gcggtatcaa tacgtcgggt aaagtagcga ttacccggcc tggcccccag
    12061 caataagccc acgttacgcg ccggaactgc gttgacatcg ctccaggtca gctgcttgct
    12121 ggcgttgacc attactcgat cggcgataaa aatggtcgct cctgccacaa gtaacagtaa
    12181 gcaggcaatc tttagagtcc ggcgagaaaa acaaatacgg agaagaaggc ggggctgcat
    12241 ggtcgttatc cttaacgaaa ggggggaggt cgattttagg cgctaaagaa agaaaagata
    12301 acgcctgaca tcattttcag attttgtcct gcccaagcga caactgcgtt agccacagcc
    12361 gggtgtcgaa ctccagctgg tggtactgcg gctccatatg gcagcacaac tggtaaaacg
    12421 ctttgttatg ctctttctcc ttcaggtgcg ccagttcgtg caccacgatc atacgtaaaa
    12481 acggttccgg cgcgttgcga aacacagtag cgacgcggat ctctgctttt gctttcagct
    12541 tgccgccctg cacacgagaa acagcggtat gtaacccgag cgcgtttttt agcacatgga
    12601 tcttattgtc atacatcact ttattgatcg gcggggcatt gcgcagaaac tgatttttta
    12661 gatcctgagt atattgccag agggctttat cggtggcgta gtcgtgtgtt cccggatagc
    12721 gttttgccag cacatcgccc agacgctgtt cgttaatcag cgttcgcacc tgggaaagta
    12781 gctgctcggg ataaccctga agataagtaa gattgctcat aaccgcccac gaaaaagaga
    12841 aaaagggtat actcacgcac ccttttcagg ggcaacgtcg aaattttatc attcaggagg
    12901 gccgatgagc cacttagaca acggtttccg ttcactgaca ctacaacgtt ttccggcgac
    12961 ggatgacgtt aacccgctac aggcgtggga agcggcggat gaatatttgc tgcaacagtt
    13021 ggacgacaca gaaatccgcg gcccggtgtt gatcctgaat gatgcctttg gtgcgttaag
    13081 ctgcgcgctg gcggaacata agccgtacag cattggcgac tcatacatca gtgaactggc
    13141 gacgcgcgag aatttacgcc tcaacgggat tgatgagtcg agcgtgaagt ttctcgacag
    13201 caccgccgac tacccgcaac agccgggtgt ggtgctgatc aaagtgccga aaacactggc
    13261 attgctggaa caacaactgc gtgcgctgcg caaagtggtc acgtcggata cacgtattat
    13321 tgccggtgcc aaagcccgtg acattcacac ttccacgctg gaactgttcg aaaaagtgct
    13381 cggcccgacc accaccacgc tggcatggaa aaaagcgcgc ctgattaatt gcacgttcaa
    13441 tgaaccgccg ctggccgatg cgccgcagac cgttagctgg aagctggaag gtactgactg
    13501 gactatccat aaccatgcga atgtcttctc ccgcaccggg cttgatatcg gcgcgcgctt
    13561 ctttatgcaa catctgccag agaatctcga aggggagatt gtcgatctcg gttgcggtaa
    13621 tggcgttatt ggtctgacgc tgcttgataa aaatccgcag gcgaaagtgg tgtttgtcga
    13681 tgaatcgccg atggcggttg cttccagccg tttgaacgtt gaaaccaaca tgccagaggc
    13741 gttggatcgc agcgagttta tgatcaacaa cgcgctctcc ggcgtggagc ctttccgctt
    13801 taatgctgtg ctctgcaacc cgccgtttca ccaacaacat gcgctgaccg ataacgtcgc
    13861 ctgggagatg ttccaccatg cccgccgctg cctgaaaatc aacggcgagc tgtatattgt
    13921 tgccaaccgt cacctggatt acttccataa actgaagaag attttcggca actgcaccac
    13981 catcgccacg aataataaat ttgtggtgct gaaagcagtg aagctggggc gtcgtcggta
    14041 agattgggag ttacctgccg gatgcggcgt taacgcctta tccggcctac gttcagcacg
    14101 ttactcccag gccggataag acgcggcaag cgtcgcatcc ggcaatgtct gcccagttct
    14161 ggaatcgcgc ttccataaaa caaaaaatcc ctctcaccat cctctacatt ctcttgttta
    14221 gcgtttttct acgtttattc ttccgtcaca cagataaatt catacgttgc caatctgtca
    14281 acggatgtta tcatattgcc aatttgtcaa cggacgtgat gaagaatgca cctgataact
    14341 caaaaagcat tgaaagatgc tgcggaaaaa tacccgcaac ataaaacgga gttggtggct
    14401 ctggggaaca cgattgctaa gggatatttc aaaaaacctg agtcattaaa agcagtattc
    14461 ccatctctgg ataacttcaa atatctggat aagcattatg ttttcaatgt tgggggcaat
    14521 gaattacgtg ttgtagcaat ggtctttttt gaatcgcaaa agtgctacat acgtgaagtt
    14581 atgacgcata aagaatacga tttctttacc gctgttcatc gtactaaggg gaaaaaatga
    14641 ttgcgattgc cgacatcttg caagcaggag aaaagctaac tgcggtggta ccttttctgg
    14701 cgggtattca gaacgaggaa caatacaccc aggcgctgga actggtagat catctgctgc
    14761 tcaacgatcc tgaaaacccc ttgctggatc tggtgtgtgc caaaataacc gcgtgggaag
    14821 aatcagcgcc cgaatttgcg gaatttaatg ccatggctca agccatgcct ggcggtatag
    14881 ccgtgattcg tacccttatg gatcaatatg gtttaaccct tgccgatctg ccggaaattg
    14941 gcagtaaatc tatggtgtca cgcgttttga gcgggaagag gaaattaacg ctggaacacg
    15001 ctaaaaaatt ggcaacgcga ttcggcattt ctcccgcctt gtttattgat taacgcgacg
    15061 tgccggatgc gttgcatccg gcgcttcaaa taacgattta aatctccagc gccagccgtg
    15121 ttccctgggc aattgcccgt cgtgcgttca gctccatagc cacatcgcag ccgccaatta
    15181 aatgcacagt tttcccgcta tcaatcagcg gttgcgccag cgcgcggttt ggctcttgcc
    15241 ctgcgcagat caccacattg tccacagcta atacctgcgt ttcgccgttg atcaccacat
    15301 gcagcccgtc atcgtcaatc ttctgataac ttacgcctgg gatcattttc acaccccgcg
    15361 agagcagggt ggtgcgatgg atccagccgg tggttttgcc taacccctgt cccggtttgc
    15421 tggctttgcg ctggagcatc acaatttgcc gtgggctacg cgggatctgc attccctgcg
    15481 ggcttaagcc accagcctgt tgtaggctgc tgtcgatccc ccactcatta cagaacctgg
    15541 cgatattctg gctggttgat tcgcccggct gacttaaata catcgccgta tcaaaaccaa
    15601 tcccgccaca accgatgatg gcaaccttgt tgcctaccgg cgctttgtcg cgcagtacat
    15661 cgagataact caataccttc ggatgatcga tcccgtcgat aggcggaacg cgcggcacga
    15721 tcccactggc gaggatcgtt tcatcgaacg cctgtaactg atccgccgtc acggtgtgat
    15781 tgagtttcag cgtcacgccc gtcacttcga tcatccggtg gtaatagcgc agcgtttcgt
    15841 aaaactcctc tttgccgggg atctgtttgg cgatattaaa ctgcccgccg ctctcgctgt
    15901 gggcatcaaa caatgttacc tgatgcccac gcgccgccgc gttaatggca aacgccagcc
    15961 cagcaggtcc cgcaccgacc accgccagat tttttttctg cacggcagga aggattggca
    16021 ttttggtttc gtggcaggcg cgaggattca ccaggcacga ggtgactttg ccaacgaaga
    16081 tctgatcgag gcaggcctga ttgcagccaa tgcaggtgtt gatctcatcg gctcgccccg
    16141 attgcgcttt tgacagcagt tccgcatcag caagaaacgg tcgtgccatc gataccatat
    16201 cggcatcgcc gcgcgagaga atatcgtcgg caacctgcgg atcgttaatc cggttggtgg
    16261 ttaccagcgg cagcgagacg tggcctttca gtttgcgcgt gacccagcta aatgcgccgc
    16321 gcggcacggg cgtggcaatg gtcggaatac gtgcttcatg ccagccaatg ccggtgttga
    16381 taatggtcgc gcccgccgct tcaatggcct gcgccagctc taccgtttcg gcaaaagtcc
    16441 cgccgtcttc gaccaggtcg agcatcgaca gtcggtagat aataatgaag tcgttgccga
    16501 cgcgttcgcg caccgcacgc actacttcta cggcaaatcg catccggttg cggtaatcgc
    16561 cgccccactg gtcactacgc tgattggtgt gcagcgtcag aaattcgttg atcaaatacc
    16621 cttcggaccc cattacctct acaccgtcgt atcctgcctc ccgtgccagt tgcgcgcagt
    16681 gggcgaaatc gtcgatcagt tgcaggatct cttcatgggt gagttcgtga ggaacgaaac
    16741 ggttgatggg ggcctgcaat gcggagggag cgaccagatg cggttggtag ctgtagcgcc
    16801 cggtatgcaa aatttgcagg gctattttgc cgccttcctg atgtaccgct tcggtaatgg
    16861 tgcgatggtg tgggatctgg ctggcgtcgt tgagcattgc gccaccttcc atgccaacgc
    16921 ctgttaaatc tggtgcaatg ccgccgctga caatcagcgc cacgccgtga cgggcgcgtt
    16981 cggcataaaa cgctgccagc cgctcggcac cgtccgggta ttcctccagc ccggtgtgca
    17041 ttgagcccat caacacgcgg ttttttaacg tggtaaaacc taaatccagc ggggcgaaca
    17101 gcgacgggta gctcataaaa ttgtccagta tgtaaaataa ttgttatgtg gtcggatgag
    17161 ttctaattta gccgtcgccg gagaaaaggg aaaaggggag tgcggggttt gtgatgggat
    17221 tcaaaaagaa tacgcccggt ggtaacgccg gatgcgacgc ttgccgtgtt ttatccggcc
    17281 tgggggattg cacatgtagg gcggataagg cgttcacgcc gcatccgcca gtggcgcggt
    17341 gcagatgccg gatgcgacgc ttgtcgcgtc ttatccgacc tacgggaacg cacatgtagg
    17401 gcggataagg cgttcacgcc gcatccgcca gtggcgcggt gcagttgccg gatgcaacgc
    17461 ttgccgcgtt ttatccggcc aggaggattg cacatgtagg gcggataagg cgtttacgcc
    17521 gcatccgcca gcagttgcaa attattgctt acggaaaaaa tcgttataca acatatacaa
    17581 atgcgcggca ctccaggaga aatttggtgc gccttgctgc gcgccagtca gcgggttgta
    17641 attctcctga attgggccat cggcggttaa tcctttggcg tgccggaaga acgtatccgc
    17701 cagcttcagg gcatcatcac gataaccgta acgctccatc cctttcagag caaaccagaa
    17761 ctgatccacc catacgcgcc cgcgccagta gatatcagcg ccaaaagccg gattggttaa
    17821 cgccgccgtt cccagcggga caaaggtgtt gaactcttta ggatcgagca tcaccttcac
    17881 caccgcgtcg gcattggcct gcgttgccgc accgttaaac agcggcgacc agccttccgg
    17941 ccctttaccg cgctcaacaa tcggtttgcc cgcgcagccg ttcgccagtg gtttatcttc
    18001 aatacgtacg tcatagtaga actgggtagt cgggtcgaac atacaggtgt tgatgtagtc
    18061 cgcgagctgc tgtgccaact ggcgatagcg tttggcctct tctggcttac cgaggatggt
    18121 tgccatctcc gccagataat ggttatcgct gtacatatag ctggcctgat ccaccgactc
    18181 ctgcaatagc gagtagccca gcaacgttcc gtcctgactg cggttttcgg cgaatttcac
    18241 cgtccagtcg ctacgtttgc caccattagc gacatattta tccaactgtt ctttgtcgat
    18301 aaaaccaaag acggcggcat catcacgccc cgattcccac gacgcagcga cctgtgccgg
    18361 aatttccaga ctgtcgtact ggcctttctc caccacgcgg gcgtagttgt tcagcccaga
    18421 ctgcgtctct tctttgttgc ctttcttcac cgcaaacagc atctcgccgc tctcagtgtt
    18481 gtgggctttg tcgcgggtcg cgccatattc cggcacgccg ttgccgttgt gatcgcggtt
    18541 acgtaaccac cagtcgtgat aggcgaccag tttcgggtac atctctgcca accaggcttt
    18601 atcctgggtg acgttgtaca cttctatcac cgaccaggcg gcaaggctgg gtttggtatt
    18661 acgttcgttc cagttgccgc catcgccacc acgctcgggg ctaaggttcc acgctatcag
    18721 gtcggggaca aagcccacat cctgcggacg cacgcggtcg ccaggctgga tctgccagga
    18781 gaagaccgcg cggatattct ctttggcgat gtccggattg aaatgcgcca tcgcaaacgc
    18841 ctgcttctag gtatcccacg gccaggtctg attgccggag aaccagcgcc cggtcaccga
    18901 cggtgtaacg gtgttaaatt tcaccgcacc gcccggtgag cgccagttac cgttgagcgt
    18961 ttcgatcgct ttcaccgcga cgcgcgtctg ttccggcgtc gcatccggat tggttaaccc
    19021 tttcttcagg tattcttccc agcgttgctg cgaggcggtg agataaaacg ccggacgcgc
    19081 cagaatatcg cggatctgca tttgctcttt gctaacttcc tgagcggtca gcagatggga
    19141 ataggtggtg tagagcgtgg tcgaaccgtt gatatgcgcc ttactggtaa agcgattacc
    19201 gttgatttca gtctgcaccg gcagggattt atgcacctga tattccgatt cgccggaggt
    19261 cagcagatcc caggtggcgc gcactttgcc aaaggtgact ttcaggccat cacgggtggc
    19321 gctgattttg cgctgatagt cagggtattc gccagcaatg gttttatcgg aaagcggttt
    19381 cccttctttc gcttccagtt tttccagcag ttcgccgtcc cacaccagat ccagcggttt
    19441 attgctggtg attttggttt ccagtagtga cgtgcgcggc gtggcgaagc gcagagtcat
    19501 ttcgacttgc acatcttttg ctgtcagttt ttgcaccagc gcaccgggaa tactgtatgc
    19561 ctccagcgta aagtcgactt tcttgccgtc ctgccagacg gtcaggcggt cgaaattgct
    19621 ggccataaag ttgatgtact cttccgtcag cagcgcaacg cccggaaagc cgcccatggt
    19681 gttagggccg tctggcaaca gatgaccatg ccaggctccg agatcgaaaa acggattaaa
    19741 acgctggtga tcgtcgtaat cgtaatcctt catgtactgc ggcgcgccag tacggttaat
    19801 cacgttttta taattgtcgg cgttagcggc atgggcggaa aaacttatca gcagagcgca
    19861 ggttactggc gttaaaatag tttttatttt catgaaatta cagtccttat taccagtaga
    19921 aatattgcat caggaagatt tggtcgctgg gatcgtgaga ggcatttttc atgtagaagc
    19981 ggctatcaaa agccgtggcg aaacgtccgc cgccgtattc gtaccagata ccaaactgca
    20041 tgaaagaggt ggtttcatcg tcagcgtggt cagggcgatg tttggcgtag gtgtaagcgg
    20101 tggagagata aacgcccttt aacgcttcat acatggcgct caccatcatc ccactttcac
    20161 ttcccggtac gtccagcccg tcggcgcgtc cggtatggtg ccaggcgcga gcggcaaagt
    20221 taggagttag caggcccgtg agatagagct gtcctgtgcc gtcggtgatt tccagaccgt
    20281 tcatccaggt gatgccttcg gcaaggtcat actggatgta accgttcatc attgccggat
    20341 aggtgtattt gtcgtcatag cgatcgtatt tgccaaaatg tagccaggct ttgctttcat
    20401 catgatgtcc ggcaggagtc gcggtgacgc tataacgaaa gttgccgctt aagttctgta
    20461 ccttcagcgc agccataatg tcgcgggtat tgggaatgac gtagcccaga tcgggggtga
    20521 aatcgcccca ccattgcagg tcatccagcg aggaatccta acgcagactg agcatgattt
    20581 cggtgccatc attggtacga taaccgccat agaaacggtt aattccgccc tcgaaaccac
    20641 cccagctatg gtctgg
//
LOCUS       DADKRT010000066        20603 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.067, whole genome shotgun sequence.
ACCESSION   DADKRT010000066 DADKRT010000000
VERSION     DADKRT010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20603
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.067"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(56..481)
                     /gene="nudI"
                     /locus_tag="JQ356_002006"
     CDS             complement(56..481)
                     /gene="nudI"
                     /locus_tag="JQ356_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase NudI"
                     /protein_id="HAY4622106.1"
                     /translation="MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVEYGE
                     RIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSAN
                     REVKINEEFQDYTWVKPEDLVHYDLNVATRKTLRLKGLL"
     gene            760..1302
                     /locus_tag="JQ356_002007"
     CDS             760..1302
                     /locus_tag="JQ356_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622107.1"
                     /translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTEST
                     GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG
                     LQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARSTIMRPVSIEAGYRYLNLSGK
                     DGNRDNAVADGPYVGVNASF"
     gene            1402..2604
                     /locus_tag="JQ356_002008"
                     /pseudo
     CDS             1402..2604
                     /locus_tag="JQ356_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416752.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
     gene            2824..3606
                     /locus_tag="JQ356_002009"
     CDS             2824..3606
                     /locus_tag="JQ356_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HAY4622108.1"
                     /translation="MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYL
                     LLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCH
                     LGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLSWQPAAVQQSIIEGL
                     VWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYPDVRCVAAPVFNANNELTAAIS
                     VVGTRLQINEEYRDYLAGKSIACARDISRLLGWKSPFDLQAS"
     gene            3621..4826
                     /gene="rhmD"
                     /locus_tag="JQ356_002010"
     CDS             3621..4826
                     /gene="rhmD"
                     /locus_tag="JQ356_002010"
                     /EC_number="4.2.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnonate dehydratase"
                     /protein_id="HAY4622109.1"
                     /translation="MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATP
                     MSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEG
                     KCVSDIKLIHDQMLNATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAV
                     RDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFW
                     LMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYEGYRELKRNAPVGMMVTSGE
                     HHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHA
                     VITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRD
                     CNLKRPYSH"
     gene            4883..6172
                     /locus_tag="JQ356_002011"
     CDS             4883..6172
                     /locus_tag="JQ356_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4622110.1"
                     /translation="MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQI
                     DTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWAD
                     TEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLS
                     GALLEMHGFMGHPGWFWMFVIEGLLAVGVGVFTFFWLDDTPEQARFLSKQEKTLLINQ
                     LASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFT
                     ASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVA
                     LCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFA
                     SDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH"
     gene            6190..6993
                     /gene="yfaU"
                     /locus_tag="JQ356_002012"
     CDS             6190..6993
                     /gene="yfaU"
                     /locus_tag="JQ356_002012"
                     /EC_number="4.1.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HAY4622111.1"
                     /translation="MNALLTNPFKERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLL
                     IDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTA
                     DQARQVASATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDN
                     LDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV
                     APDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY"
     gene            complement(7034..7936)
                     /locus_tag="JQ356_002013"
     CDS             complement(7034..7936)
                     /locus_tag="JQ356_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003023514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HAY4622112.1"
                     /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT
                     LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA
                     MQRHLDKGYDKVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
                     IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
                     CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLE
                     QGIDRDQVLAATQLSEADLAANNH"
     gene            complement(8129..9319)
                     /gene="glpC"
                     /locus_tag="JQ356_002014"
     CDS             complement(8129..9319)
                     /gene="glpC"
                     /locus_tag="JQ356_002014"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HAY4622113.1"
                     /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
                     SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
                     AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR
                     KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA
                     QALA"
     gene            complement(9316..10575)
                     /gene="glpB"
                     /locus_tag="JQ356_002015"
     CDS             complement(9316..10575)
                     /gene="glpB"
                     /locus_tag="JQ356_002015"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HAY4622114.1"
                     /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
                     LDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQL
                     QGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLH
                     ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI
                     LMPACFGLADDKLWRWLNEKLLCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
                     DEVKKVTCKNGVVNEIWTRNHADIPLRPHFAVLASGSFFSGGLVAERNGIREPILGLD
                     VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
                     QGCGGGVCAVSALHAAQQIAQRAGGQQ"
     gene            complement(10565..12193)
                     /gene="glpA"
                     /locus_tag="JQ356_002016"
     CDS             complement(10565..12193)
                     /gene="glpA"
                     /locus_tag="JQ356_002016"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HAY4622115.1"
                     /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
                     FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
                     YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
                     EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP
                     AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
                     LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
                     VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
     gene            12466..13824
                     /gene="glpT"
                     /locus_tag="JQ356_002017"
     CDS             12466..13824
                     /gene="glpT"
                     /locus_tag="JQ356_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HAY4622116.1"
                     /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
                     ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRN
                     GG"
     gene            13829..14905
                     /gene="glpQ"
                     /locus_tag="JQ356_002018"
     CDS             13829..14905
                     /gene="glpQ"
                     /locus_tag="JQ356_002018"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HAY4622117.1"
                     /translation="MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP
                     EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
                     YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
                     STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
                     KNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
                     IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDAL
                     YNKAGVNGLFTDFPDKAVKFLNKE"
     gene            complement(14947..15189)
                     /locus_tag="JQ356_002019"
                     /pseudo
     CDS             complement(14947..15189)
                     /locus_tag="JQ356_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311149.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            15368..16018
                     /gene="inaA"
                     /locus_tag="JQ356_002020"
                     /pseudo
     CDS             15368..16018
                     /gene="inaA"
                     /locus_tag="JQ356_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416740.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA"
     gene            complement(16072..16326)
                     /gene="yfaE"
                     /locus_tag="JQ356_002021"
     CDS             complement(16072..16326)
                     /gene="yfaE"
                     /locus_tag="JQ356_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HAY4622118.1"
                     /translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS
                     CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(16326..17456)
                     /locus_tag="JQ356_002022"
     CDS             complement(16326..17456)
                     /locus_tag="JQ356_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase 1 subunit
                     beta"
                     /protein_id="HAY4622119.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL
                     FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL"
     gene            complement(17603..19888)
                     /gene="nrdA"
                     /locus_tag="JQ356_002023"
     CDS             complement(17603..19888)
                     /gene="nrdA"
                     /locus_tag="JQ356_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HAY4622120.1"
                     /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
                     YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGECP
                     WFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLVPSIQDDGCESGACKI"
BASE COUNT         4844 a         4990 c         5524 g         5245 t
ORIGIN      
        1 aattcgttaa ccactaaatt ttcaatctga cagccagtga tggctgtcat cattgttaaa
       61 gaagaccttt caaacgtaac gtttttcggg tggcaacatt caaatcataa tgcaccagat
      121 cttcaggttt tacccacgtg tagtcctgaa actcttcgtt tattttcact tctcggttgg
      181 cagaaacgca gtcaaaaatc aggtaaatca tataaatctc ttccttgcga ccatctgcat
      241 acgtcttggt gcgaatatca tcgctgaagg tccacggcgt gatttctgtc aaaagcagct
      301 gttctcccag ttcttcgcga atttcgcggc gtagtgcctc ttcaattcgt tcgccatact
      361 ccacgccgcc acccgaaagc gcccattgac cggggaaaac gccgcgatcg tcggccattt
      421 tgcacagcag ataagcacca tcattttgaa ttaaagggca tacaatagtc cgttgtcgca
      481 caggggtatt ccttataaat aaaaagaaac catgagaata cggtaactca gaaatatgtg
      541 aaagtgacag taatctcttt tgcgatgata actgcactta ttattatttt tgtgtgtatc
      601 ggtaaagtgt gtttattttt tcggcgttta attatttaag aagtatttag ttacaataag
      661 tgactagatc ccttttttcg ctcattgaat cctctgtgcc aggcagtaca atcccgcagc
      721 tttgggaatt ttgattaatt gcttgtggga aaggggataa tgaaaaaaat tgcgctagca
      781 ggtctggccg gaatgctgtt ggtttctgca tcggtcaatg caatgagcat cagcggtcag
      841 gcgggtaaag aatacaccaa tattggtgtc ggttttggga ctgaatcgac gggcctggcg
      901 ttaagcggta actggacaca taacgacgac gacggtgacg tcgctggcgt ggggctgggg
      961 ttgaatctgc ctctagggcc gttaatggcg accgttggcg gaaaaggcgt ttacaccaac
     1021 ccgaattacg gcgatgaagg ttatgccgca gcggtaggag gtggtttgca gtggaaaatt
     1081 ggcaacagct tccgtttgtt tggcgagtat tactactctc cggattcact ctccagcggt
     1141 attcaaagtt atgaggaagc gaatgctggc gcgcgttcca ccattatgcg tccagtcagt
     1201 attgaggcgg gttatcgcta cctgaatttg tcgggtaaag atggtaaccg cgacaacgcc
     1261 gtggctgacg gcccgtatgt tggggttaac gccagtttct gatcccttcc ggcgcggcat
     1321 tctgtcgcgc cattcagttt cttactacgc cttatctccc tttgcgttat agtgattcga
     1381 taacaaaagc aggagataac catgttaaaa gtggaaatgt tatccaccgg ggatgaagtg
     1441 ttacacgggc aaatcgttga cactaacgct gcctggctgg ccgatttttt ctttcatcag
     1501 gggctgccat tatctcgcct caatacggtg ggggataacc ttgatgactt agtcaccatt
     1561 cttcgcgaac gtagtcagca cgccgatgtg ctgatcgtta acggcgggct gggaccgacc
     1621 agcgatgatt taagcgcact cgccgctgcg acagcaaaag gtgaaggcct ggtgctgcat
     1681 gaagcctggc tcaaagagat ggaacgctat ttccacgaac gtggacgagt aatggcaccg
     1741 agcaaccgta aacaagcgga gctgcctgcc agtgctgaat ttatcaataa cccggtaggc
     1801 accgcctgtg gttttgccgt gcagcttaat cgttgcctga tgttctttac tcccggcgta
     1861 ccgtcagaat ttaaggtgat ggtcgagcac gaaatcctgc cgcgcctgcg cgagcgtttt
     1921 tctttaccac agccgccggt ttgtctgcgt ttaactacct ttggtcgttc ggaaagcgat
     1981 ctggcacaaa gcctggatac tctacaactg ccgccgggcg taacaatggg ctatcgctct
     2041 tcaatgccga ttatcgaact gaaactcacc ggaccggcaa gcgagcaaca ggcgatggaa
     2101 aaactgtggc tggacgttaa acgtgttgcc ggacagagcg tgattttcga aggcaccgaa
     2161 ggactgcccg tgcagatcag tcgcgaattg caaaaccgcc agttcagcct gacgttgagc
     2221 gagtaattca ccggtggttt attggctttg caactttctc gcgcaggtgc tccattgctg
     2281 gcgtgtgaag tggttccttc acaggaagaa aacctggcgc aaactgcgca ctggattaca
     2341 gaacggcggg ccaaccattt tgccgggctg gcactggctg tttcgggttt cgagaacgaa
     2401 catctcaact ttgcgctagc cacaccagac ggcactttcg ctctgcgtgt gcgtttcagc
     2461 actacgcgct acagcctggc tatccgtcag gaagtgtgcg caatgatggc actgaatatg
     2521 ctgcgccgtt ggttaaacgg ccaggatatc gccagtgagc atggctggat tgaggttatt
     2581 gagtccatga ccttatctgt ctgattccgc cactctgtgc cggtttactg caccggcaca
     2641 ttccccctcc ggcaaaactt gtccaacctg ttgcactcaa taagaaaaaa tccgtgcact
     2701 gattcacaaa tttgtgcgta atttctccag tccgctggac gaggagcggg atttgatgcg
     2761 cttcacaatt ttactccccc tgagcaacga gactgattcc agtatctaag actggagtcc
     2821 agtatgttgg aatcaagcaa agttcccgcc ctgacacggg ctattgatat tctcaatttg
     2881 attgcccgca ttggcccctg tagtgctgcg acgatcattg acacattggg aatccctaaa
     2941 agcacggcct atttgctgct taatgaactc aggcgtcagc gttttcttag ccttgatcac
     3001 caggaaaatt tttgtttgtg gaccaggctg gtggagcttt ctggtcatgc gttaagcaag
     3061 atggatctcc gggaactggc tcgaccgcgt ttgacgcaac tgatggatac caccgggctg
     3121 ttatgtcatc tggggattat tgataacggc agcgcttatt acattttaaa agtggagtca
     3181 tcagccacta tcagcgtgcg ttcccatgaa ggaaaaagcc tttcgcttta tcgctccgga
     3241 ataggtaaat gcctgctttc ctggcaacct gcagcggtac agcaaagtat tatcgaaggg
     3301 ctggtctggg agcaggcgac acccacaacg attactcatc cacagcaact tcacgaagaa
     3361 ctggcgcgta ttcgccgtca gggctggagc tatgacaacg gcgaagatta ccccgatgtc
     3421 cgttgtgtcg ctgcgccggt gtttaacgcc aataacgagc ttaccgctgc gatctcggtg
     3481 gtcggtaccc gcttacaaat caatgaagaa taccgtgatt atctggcggg caagtccatt
     3541 gcctgcgcca gggatatttc acgtctgttg ggatggaaaa gtccctttga cttacaagcc
     3601 tcataacaat ggagaacatc atgaccctac caaaaattaa acaggttcgc gcctggttta
     3661 ctggcggtgc gacagcagaa aaaggcgctg gcggcggtga ttatcacgac cagggggcga
     3721 atcactggat agacgatcat attgccaccc cgatgagtaa ataccgcgat tacgagcagt
     3781 cacgccagtc atttggcatt aacgttcttg gcacgttggt tgttgaagtc gaagcagaaa
     3841 acggccagac cggattcgct gtttcgacag ccggtgaaat gggctgtttt atcgtcgaaa
     3901 aacaccttaa ccgtttcatt gagggtaaat gtgtcagtga tatcaaactg atccacgatc
     3961 aaatgctcaa tgccaccctg tattactccg gctctggtgg cttggtgatg aatacgattt
     4021 cctgtgtcga tctggctctg tgggatctgt tcggcaaagt ggtcgggctt ccggtttata
     4081 aacttttagg cggcgctgtt cgtgatgaga ttcagttcta cgccacaggt gcgcgtccgg
     4141 atctggcaaa agagatgggc tttatcggtg gcaaaatgcc gacgcactgg gggccacatg
     4201 atggcgatgc ggggatccgc aaagatgccg ctatggtcgc ggatatgcgt gaaaaatgcg
     4261 gtgaagattt ctggttaatg ctcgactgct ggatgagtca ggacgtgaac tatgcgacca
     4321 aactagccca cgcttgcgcg ccctataacc tgaaatggat cgaagagtgc ctgccgccac
     4381 agcagtatga aggttatcgc gaactgaaac gcaacgcgcc agtcggaatg atggtcacca
     4441 gcggtgagca ccacggcaca ctgcaatctt ttcgtacgct ttcagaaacc ggtatcgaca
     4501 ttatgcagcc ggatgttggc tggtgcggtg gtttaaccac gctggtggaa attgccgcaa
     4561 tcgccaaatc cagggggcaa ctggtggtgc cgcacggttc gtctgtttac tctcaccatg
     4621 cggtgatcac cttcaccaat acgccattca gcgaattcct gatgaccagc ccggattgtt
     4681 caacgatgcg tccgcagttt gacccgattc tgctcaatga gccggttccg gtgaatggtc
     4741 gtattcataa atcagtgctt gataaacccg gttttggcgt cgaactcaat cgtgactgca
     4801 atttgaaacg cccctacagc cactaatcac tccgggcgtt gctgtgacaa cggtaacgcc
     4861 cacatattct aaggagcttt ttatgagcac cgctttgctt gacgccgtgg tgaagaaaaa
     4921 ccgtgtgcgt ttaattccgt ttatgttggc gctgtatgtg ctggcgtttc tcgaccgttc
     4981 gaatatcggt tttgccaaac agacctacca gattgatacc gggttgagta atgaagctta
     5041 tgcgctggga gcaggcattt tctttgtggt atatgcgttt ctgggtgttc cggcgaatct
     5101 tttgatgcgc aaactggggg ccagaacctg gattggtacg acaacactgc tgtggggatt
     5161 tctttcggca gccatggcat gggccgatac tgaagcgaaa tttctgatag ttcgcactct
     5221 gcttggtgct gcggaggccg gatttttccc tggtatgatt tatctcacct cgcaatggtt
     5281 tccgcagcgt aatcgcgcca gcattatggg gctgttctat atgggcgcac cgctggcgtt
     5341 aacactggga tcaccgcttt ccggcgcgct gttggagatg catggattta tggggcatcc
     5401 cggctggttc tggatgtttg tgattgaagg attgttggca gtcggtgttg gggtattcac
     5461 attcttttgg cttgatgaca caccggagca ggcacgtttt ctgagtaaac aagaaaaaac
     5521 gttgcttatc aatcaactgg caagtgaaga acaacagaaa gtgacttctc ggctgagcga
     5581 tgcgctgcgt aatggccgag tctggcaact agcgattatc tacctgacca ttcaggtggc
     5641 ggtttacgga ttaattttct tcctgccgac ccaggttgcg gcattgctgg gaacaaaagt
     5701 gggctttaca gcgtcggtgg tcaccgccat tccgtgggtt gcggccttgt ttgggacctg
     5761 gcttattccg cgctattccg ataaaaccgg cgaacggcgt aatgtcgcag cgctgacatt
     5821 actggcggcg ggcattggta ttggtctgtc cgggctgctt tctccagtaa tggcgatcgt
     5881 agcgctgtgt gttgcagcta tcgggtttat tgccgtgcag ccggtgttct ggacgatgcc
     5941 gacacaactg ctttccggta cggcgctggc tgcggggatt ggttttgtaa acctgtttgg
     6001 tgcagtgggc gggtttattg ccccgatcct gcgcgtgaaa gcagaaacgt tatttgccag
     6061 cgatgcggca ggattactga cactggcagc ggtggcggtc atcggttcgc tgattatttt
     6121 cactctgcgt gtaaatcgta ctgttgcgca gaccgacgtg gcacatcatt aaataggtta
     6181 aggaacacga tgaacgcatt attaaccaat ccctttaaag aacgtttacg caagggcgaa
     6241 gtgcaaattg gtctgtggtt aagctcgact acttcttata tggcagaaat tgccgctact
     6301 tccggttatg actggttgct gattgacggg gagcacgcgc caaacaccat tcaggatctt
     6361 tatcaccagc tacaggcggt agcgccctat gccagccaac ccgtgatccg tccggtggaa
     6421 ggcagtaaat cgctgattaa acaagttctg gatattggcg cgcaaactct attgatcccg
     6481 atggtcgata ctgccgatca ggctcgtcag gtggcgtctg ccacgcgcta tcctccctac
     6541 ggtgagcgtg gtgttggggc cagtgtggca cgggctgcgc gctggggacg cattgagaat
     6601 tacatggcgc aagtcaacga ttcgctttgt ctgttagtgc aggtggaaag taaaacggca
     6661 ctggataacc tggacgagat cctcgacgtc gaagggattg atggcgtgtt tattggacca
     6721 gcggatcttt ctgcgtcgtt gggctacccg gataacgccg ggcacccgga agtgcagcga
     6781 attattgaaa ccagcattcg gcggatccgt gctgcgggta aagcggctgg ttttctggct
     6841 gtggctcctg atatggcgca gcaatgcctg gcgtggggag cgaactttgt cgctgttggc
     6901 gttgacacga tgctctacag cgatgccctg gatcaacgac tggcgatgtt taaatcaggc
     6961 aaaaatgggc cacgcataaa aggtagttat tgatatcaaa ggcccatggg gatcggctgt
     7021 gggcctgtgt taattagtgg ttattcgctg ccagatcggc ttcgcttagc tgggtggccg
     7081 cgagcacctg gtcacgatca atgccctgtt ccagcatgcg caaagcaatt ttaatggctt
     7141 gttcatgcat accttcctgc cagccaattt gatgcccttc ctgccgtagc cgttcagcaa
     7201 tagtcattaa tctctccttt tgtagtggtg aacgttcggc aatctcctca ataaaacggg
     7261 tgaaacggga ggtatcgccg cattgcagca gataattaaa cagtgtttgt agctggctgt
     7321 cattagtgaa gcctctaacc aaaagcgtgg tgatcctgtc gaccatgccg attaaatcgc
     7381 ggtcgcgaat atgcttttga atcagttcca gcagagctat acgccgatgt tgcatgatct
     7441 catcgtcagg tacgatggtg atatccacca acggaaaagc ttcggtgtac aactgccggg
     7501 caagttgcgg atcgtcaaac tcatccagcc agttaagtga gtacgggtag ggcgatgttt
     7561 cgccatgata aaacagcaat ggcaccacca gcggaacttt gtcatagcct ttatccaggt
     7621 gacgctgcat ggcggcagtg gcatagcgca ttagccgaaa agccatattc ttttctgcag
     7681 agctttgatg ttcaatcacg cagtagatat agccgtcacc gtcgctggtt tccacggacc
     7741 acaaaacatc cgagtagtaa gcgcgtaaac ttttttcaat aaaactagtg ggttccaggc
     7801 gtaaggtttg caggttgcaa agcttgcgca gtggttctgg taaatgtatt tcgagaaaat
     7861 cccgtgcggt ttcgggtgtg aacataaagg ttttaaatac cgcatcatgc ggggaggagg
     7921 ttgttgattc ggtcatggtt gtccgtcacc tgatatttat gatgacgcga cattacggtt
     7981 atcctaggcc tttgacatct gccagtttca gcctttgcga gacgttttca gaggaatttt
     8041 cactgcgttg caacgcatac attgggcacg gaatcgtgta cgcaaaaatg cccggtaacc
     8101 acatgcttac cgggcatcag aaaggagttt aagccagcgc ctgggccagt agcgtaatcg
     8161 gatgttcgca gcgaagactt gtggacatct caatctgcca tttacaggtt tcgcagtcgg
     8221 tgaccaccag atctgcgccg ctttcttcta tctggcggaa cagtggtgcg ccgatggctt
     8281 gtgaggtggg gtagttctct tttttgaaac cgtaagtacc cgcaataccg cagcactggg
     8341 aatccagcac cgttaactca agccccggga ttttacgcaa cagctccagg gtgtagagcg
     8401 tccagcccat tttttccata tggcacggag tgtgataaac cactttcagc ggcagcggtt
     8461 tcagcggtaa cgttttgcct tcgtccagct tgcgccacag ccagcgggtt gccagttcga
     8521 tatgatcgcg caagcctttg ttgtcgacat tcagcacttc cgggtattcg tcgcgcaggg
     8581 caaatgtaca ggttgaggag gtggcaatca ccggaatgcc ttttactccc acagcttcgc
     8641 ggatcgactc tacattcgta attgcctgtt tgcgtgcttt atcggtaaag ccgttggcga
     8701 ttagcggtac gccgcagcat ttttctttgc tgagcagttg tacaccggta cccattgcgt
     8761 tgagcacttt aattaaatct ttacctaact gcggatggtt gtagttaacg aagcagccgt
     8821 gaaagaaagc gacctggtct ttatattgtg cttgctgagc cgctatgctg cgataccagc
     8881 gacggaacgt gccgaaggag tatttcggta gcgtgcgacg atgatcgatt tttaacgccg
     8941 catcaagcag ctgccgcacc ggtttcagcg aggtagcggt gttgacgatt ggtgcgaacg
     9001 gcgtggaaac gctacccatc aggtcggtat gactcaacac aaaattacgc agcgacgggc
     9061 gcgtggtgtc atattttgcc cgcgcgcgct ggataatatc gccaatcttc acatcggacg
     9121 ggcaggcgac ttcacaacgt ttgcagttga tgcaatattt cagcgcctcg tcatacagtg
     9181 cgccatcttt caaacgcaga cgctcgccat ccggcccggc ttgttttggc cctggataac
     9241 cgggattcac ccggctcacc gggcaggcgg tggtgcagac ggtgcactta atgcagtttt
     9301 cgaagctggt gtcgttcatt gttggcctcc tgcgcgttgg gcaatctgtt gagcggcatg
     9361 taaagcactg acggcacaaa caccgccgcc gcatccctgg gcgatgggat caaatccgcc
     9421 cagcaccgaa ccgatggcaa acaggttctc aatggtttgc cctgcctgcg acgggcgtag
     9481 cgtctcatca gtggttacac cgaactgctg ccacggttgc ggcgcaaaaa aatcgccctt
     9541 ataccattca ccccgcgtgg cggtttgtag cacatcaagg ccgagaatcg gctcgcgaat
     9601 gccgttacgt tccgctacca gtccgccact aaagaaactg ccgctggcga gaaccgcgaa
     9661 atgtggacgt agcggaatat cggcgtgatt gcgggtccag atttcattca ctacgccatt
     9721 tttacaggtc acttttttca cttcatcgcc cggcatccac acgccaccct ggcgcacaaa
     9781 ctggcgctgt aactggtttt gcagacgaat gcccagcacg gaaggcggca gcgttggcaa
     9841 aagcatcagt gaacaaagta gtttttcatt caaccaacgc cacagtttgt catcggccag
     9901 gccgaagcag gcaggcatca ggatcatttc gcaggtattg gcgacaggaa taagcgcatc
     9961 aagtaacagc ggccagtttt cttcattatc aaggaaacgg gcgatattca cagcgcgaaa
    10021 ttcggtggcg ttattgcgca ggacatccag ttccggcagc tctatttctg cggtttcaac
    10081 cgaaagatcc agttcgtgca acgaagccgc cgcaagatgc gcctgaaaat ccatcaggcc
    10141 gcttatcccg accacacata ttttcttcgc gggcaacggc cagacgggga cttctggcga
    10201 acttagccag gtagagcgca gagtgccgag cggcgtaatc cgctggtgag ccagttctac
    10261 gctgccctgc aattgcgcac cgctttcagc gattaatgcc tgcgcctggc aagcgagatc
    10321 gagcacgcgt tgtggcccga gaagagagta aggatgtgca ggtgcctgct gacgcaaaga
    10381 ttccagtcca ctgtgaatgt ctgccacggg ttgaccatct ggcagatggc tcagcaaatc
    10441 cagcgaaccg gatgagaaat gcaacgcgct ttgaccacgc gtgacaatgg cacagcgcag
    10501 gccgtgtttt tgcagttgca ggccacagag taatccggcg aggccgccgc ccataatgac
    10561 agtatcaaag cgcatctttc tgctccttct ccagaccaca cagtccctga taaacccagc
    10621 gggtaaattc gctttcgcgc agtgcgtctc cccaggcgat gggttgcacg cctttccagc
    10681 gttcgttaag gaaggtggaa agttgctcga tagattgcgc ggacgtcgtg acgttaaacc
    10741 gttgcagcag tccggcagcg cggcaggcgc agagttcgcc ctggcaggtg cccatcccca
    10801 cacgggtacg acggcgtaaa tccagcaggc tattaacgtt taaattttct accgcgtact
    10861 gcacttcacc cgcagttacc gcttcgcact cacataccag gctacggtgc agacggcctt
    10921 cgctcagcca ggcaggcgtg cgatcgccat gacgataaac cgcagaaccg cgcagcgggg
    10981 caggcaggga gatgacttta cgcaaggtaa cttcagcggg ttcttgtgaa ccaggcagtg
    11041 ccagatcggc agtcgtacag gggcgcgtgt tgcccagttt gcggcatacc gcgtcggtag
    11101 cccattcagc catcagccga taggtcatca gtttgccacc ggtgatggtg ataaatccgt
    11161 ccagaccatc gcgttcagca tggtcgagca gcacgatgcc acggctgacg ttacgtccgc
    11221 tcggatcgtc atcgctggca accagcgggc gcacgccaga ataggcccgc aaaatgcgcg
    11281 ttttcgccat cacgggggcc agtttttccc cttcacgcag cagaatatca acctcttctg
    11341 ccgtcactcg attatcgtca atctcgttgt aatcaatacg taaagaggtg gtaccaatca
    11401 gcgaaatggt atcgccaggc accagaatat cggcgtcgga aggtttacgg cagcggttga
    11461 tcacatgctg gttaatgcgg tgatccatga tcagcagcga tcctttcgcc gggaacatgc
    11521 gaatgcgcag atcggcatat tcggcaatgt gttgccccca gatcccagcg gcattaacca
    11581 cgacaggtgc atgaagggcc tgagtttcgc cggtgagatg gttacgtaca cgaacaccgc
    11641 acaccgtcgc gccttcacga atcagccccg tgacttcatg agcggtaagg ataacggcac
    11701 cgtgttcttt ggcatccagc atgtttgctg cggtcagacg aaatggatca acggtgccat
    11761 ccggaacttt caccgcgcca atcagtgccg ggttaacggc aggttcgata atgcgcgctt
    11821 gctgcgggtc tatagcttct gcgctgatcc ctgcttcttc gcaggcgcga ataaaagtgg
    11881 cctggaatga gaggtcatct tccggcaggg tgataaacag gccgttggtt ggttcaacgc
    11941 agtgacgtgc aatgcgtttc aggatctggt tttcactaat gcattcgcgg gccgattccg
    12001 catcggttac cgcatagcgc gcaccgctgt gcagcaggcc gtggttacgc ccggtggcac
    12061 cggttgcgat gtcgtggcgc tcaaccaaaa tcacgcgcag cccgcgcagg gcacagtcgc
    12121 gggcaatccc ggctcccgtt gcgccgccgc caatgataat cacgtcactt gattgcgagt
    12181 cgcgagtttt cattgttatc cctctgaagt tcgtttttta ccatttagcc atagtaaaaa
    12241 catgaattgt ttgatttcgc gcatgttcgc tcataattcg aaagtgaaac gtgatttcat
    12301 gcgtcatttt gaacattttg taaatcttat ttaataatgt gtgcggcaat tcacatttaa
    12361 tttatgaatg ttttcttaac atcgcggcaa ctcaagaaac ggcaggttct ctcactgaat
    12421 caggctgtta atcataaata agaccacggg ccacggaggc tatcaatgtt gagtattttt
    12481 aaaccagcgc cacacaaagc gcgcttacct gctgcggaga tcgatccgac ttatcgtcga
    12541 ttgcgctggc aaattttctt ggggatattc tttggctatg cggcttacta tttggttcgt
    12601 aagaactttg cgcttgctat gccttatctg gtcgagcagg gattctctcg cggtgattta
    12661 ggtttcgcgc tttcggggat ctcgatcgct tatggatttt cgaaattcat aatgggttcg
    12721 gtatcagatc gctcgaatcc gcgcgttttc ctccccgcag gtttgattct ggcggcggca
    12781 gtgatgttgt ttatgggctt tgtgccatgg gcgacgtcga gcattgcggt gatgtttgta
    12841 cttttgttcc tctgcggttg gttccagggg atggggtggc cgccgtgtgg tcgtactatg
    12901 gtgcactggt ggtcgcagaa agaacgtggc ggcattgtgt cagtgtggaa ctgtgcgcac
    12961 aacgttggtg gtggtattcc gccgctgctg ttcctgctgg ggatggcctg gttcaatgac
    13021 tggcatgcgg cgctctatat gcctgctttc tgcgccattc tggtggcatt attcgccttt
    13081 gcgatgatgc gcgatacccc gcaatcctgt ggcttgccgc cgatcgaaga gtacaaaaat
    13141 gattatccgg acgactataa cgaaaaagcg gaacaggagc tgacggcgaa gcaaatcttc
    13201 atgcagtacg tactgccgaa caaactgctg tggtatatcg ccatcgccaa cgtgttcgtt
    13261 tatctgctgc gttacggcat cctcgactgg tcaccgactt atctgaaaga ggttaagcat
    13321 ttcgcgctgg ataaatcctc ctgggcctac ttcctttatg aatatgcagg tattccgggc
    13381 actctgctgt gcggctggat gtcggataaa gtcttccgtg gcaaccgtgg ggcaaccggc
    13441 gttttcttta tgacactggt gaccatcgcg actatcgttt actggatgaa cccggcaggt
    13501 aacccaaccg tcgatatgat ttgtatgatt gttatcggct tcctgatcta cggtcctgtg
    13561 atgctgatcg gtctgcatgc gctggaactg gcaccgaaaa aagcggcagg tacggcagcg
    13621 ggctttaccg ggctgtttgg ttacctgggc ggttcggtgg cggcgagcgc gattgttggc
    13681 tacaccgtgg acttcttcgg ctgggatggc ggctttatgg taatgattgg cggcagcatt
    13741 ctggcggtta tcttgttgat tgttgtgatg attggcgaaa aacgtcgcca tgaacaatta
    13801 ctacaaaaac gcaacggagg ctaatggcat gaaattgacg ctgaaaaacc ttagcatggc
    13861 gatcatgatg agcactatag tcatgggaag cagtgcaatg gcggcggaca gcaacgaaaa
    13921 aatagtcatc gcccatcgcg gtgccagtgg atatttgccg gagcatacgc tgccagcaaa
    13981 agcgatggcg tatgcgcagg gagcggatta tctggaacag gatttggtga tgaccaaaga
    14041 cgaccatctg gttgttctgc atgaccatta tctcgatcgt gttactgatg ttgccgatcg
    14101 tttcccggat cgggcgcgca aagacggtcg ttactacgcg atagatttca cgctggatga
    14161 aattaagtcg ttgaaattta ccgaaggttt cgatattgaa aacggtaaaa aagtgcagac
    14221 ttatccgggg cgtttcccaa tgggtaagtc cgacttccgg gtgcacacct ttgaagaaga
    14281 gattgaattt gttcaggggt taaatcactc taccgggaaa aatatcggta tttatccaga
    14341 aatcaaagcg ccgtggttcc atcatcagga agggaaggat attgcggcaa aaacgctgga
    14401 agtgctgaag aaatatggtt acaccggtaa agacgataaa gtttatttgc aatgttttga
    14461 tgctgatgag ctgaagcgta ttaagaatga gctggaaccc aaaatgggca tggagctcaa
    14521 tctggtacag ctgattgcct ataccgactg gaatgaaacg cagcagaaac agccggatgg
    14581 aagctgggtt aattacaact acgactggat gtttaagccg ggtgccatga aacaggtggc
    14641 ggaatatgca gatggtattg gtccggatta ccatatgttg attgaggaga catcgcagcc
    14701 gggtaatatc aaactcactg gcatggtgca agatgctcag cagaataaac tggtagtgca
    14761 tccttatacc gtgcggtcag ataaactgcc tgaatacact cctgatgtga atcagttata
    14821 tgatgctctg tataacaaag cgggtgtaaa tgggctgttt actgatttcc ctgataaggc
    14881 agtaaaattt cttaataaag agtaatgtta ctgcaggatg gcgttcatgc gccatcctgt
    14941 ctcatatcaa atttttccaa tcgccactaa ttgttccatg cacatttgta gtaaaaacag
    15001 tggactgcct tctaccggct tttctttagc cagcaacgaa atctgtcgat agaaagttgg
    15061 ttcgagagga acggaacaca attcacctgc aatgcttttc agcgttaact ctggttgtaa
    15121 ggcgatgcct aatccctgtc gaataaaatt catcgctgta tccgcctgat taaattcaca
    15181 ttttatctgc tgggcgcact attagtggta gtggctggtg gaatctatgc gctgcaaatg
    15241 aagggtaaaa gcggtgtcaa gctagtagtg gcaaaagaaa ttcattaata cgacacgttt
    15301 cattaagatt ttcctcaggt aaccacctat agtcattgtc gttaataaaa acgacaggcg
    15361 atagggtatg gcagtttcag caaagtacga cgaatttaat cactggtggg caacagaggg
    15421 cgactgggtt gaagagccta actatcgccg taatggtatg agcggggtgc aatgcgtcga
    15481 gcgcaacggc aaaaagctgt atgtaaagcg catgacgcat catctgtttc attctgtacg
    15541 ttatccgttc ggccgaccaa cgattgtccg tgaggttgcg gtaattaaat aactggaacg
    15601 ggccggtgtc atcgtgccga agatcgtttt tggtgaagcg gtgaaaattg agggtgaatg
    15661 gcgagcgttg ctggtgactg aagatatggc ggggttcatc agcattgctg actggtatgc
    15721 ccagcatgca gtatcgcctt attctgacga agtacggcaa gccatgttga aagcagtggc
    15781 gctggcgttt aagaaaatgc atagcattaa tcgtcagcat ggctgttgtt atgttcgcca
    15841 tatctatgtg aaaacagaag gtaaggcaga agctggtttt cttgacctgg agaaaagtcg
    15901 tcgccgcttg cgtcgcgata aagcgattaa tcatgacttc cgccagctgg aaaaatatct
    15961 ggagccaatc cccaaagcgg actgggagca ggtgaaagcg tattactacg ccatgtaatc
    16021 gttgtaggcc agataagaca cataagcgtt gtatctggca ctacaaccaa ttcacatctc
    16081 gatttcaata tcgccttttg cccggcaaca acagggcaaa atttcccccg gctgaataaa
    16141 ggctaacggt tcggcaatcc agtcaacttg acctgcaacc aggcgtgtgc gacaggagcc
    16201 gcagtaacct tcgcgacact ggtactcaac cgccacattg tgggattcca gcgctgccag
    16261 aagggaaggg tgttcatcct ggcacagcag ttgtgtgcca gtgatgcgca gggtaacgcg
    16321 ggccatcaga gctggaagtt actcaaatcg tcggtgtcca cttccgagtc aatctgcccg
    16381 accagataag aactgacttc cacttcctgc ggagcaacct gcacgttatc agacaccagc
    16441 caagtgttga tccacgggat cgggttggag cgcgtctgga acggcagatc caaaccgact
    16501 gcctgcatac ggatattggt gatgtattca acgtactggc agagaatgtc tttattcaga
    16561 ccaatcatcg aaccgtcgcg gaacagataa tccgcccagt ctttctcctg ttgagctgcc
    16621 tgaacaaaca ggtcatagca ctcctgctta cactcttcgg caatttccgc catctcagga
    16681 tcgtccgcgc cgctgcgcag cagattcagc atatgctggg tgccggtcag gtgcagggct
    16741 tcgtcgcggg caatcaggcg aataattttg gcgttgcctt ccatcaattc gcgttctgca
    16801 aaggcaaagg aacaagcaaa gctgacgtag aagcggatcg cttccagcgc gttaacgctc
    16861 atcaggcaaa gatacagttt tttcttcagc tcgcgcaggc taacggttac ggttttaccg
    16921 ttaacggtgt gggtgccttc gcccagaagg tgccagtagc tggtcatttc gatcagttca
    16981 tcgtaatagc tggagatccc ttccgcacgt ttctggatct gctcgttggt gacgatatcg
    17041 tcaaacacaa cagacggatc gttaacgata ttacgaatga tatgagtata ggaacgggaa
    17101 tgaatcgttt ctgagaacgc ccaggtttcg acccaggttt ccagttccgg aatagaaata
    17161 agcggcaata gcgccacgtt cggactacga ccctgaatgg aatccagcag cgtctgatat
    17221 ttcaggttgc tgataaaaat gtgtttttcg tgctccggca gcgcctggta atcgatacgg
    17281 tcgcgggaga cgtcaacttc ttccggacgc cagaagaaag agagctgctt ttcgatcagc
    17341 ttttcgaaga tgtcatattt ttgctgatcg tagcgggcca cgttgaccgg ctgaccaaag
    17401 aacatcggtt ctttgagctg atcatttttc gtctgtgaaa aggtggtata tgccatgagt
    17461 gtgtcctgtt gggagtttaa tgccggataa ggcattttac gccgcatcct gtgcctgatg
    17521 cgacgctggc gcgtcttatc aggcctacaa atccgagccg taggccggat aaggcgttca
    17581 cgctgcatcc ggcatctcaa tatcagatct tacatgcgcc gctttcgcag ccatcgtcct
    17641 ggattgacgg taccagatcg tcctgcgcgt cttcagcgcc gtcacgggtg ttctgataat
    17701 acagcgtttt gaccccgaat ttgtaggcgg tgagcaggtc tttcagcaac tgctgcatcg
    17761 gcacttttcc tgacgggaaa cgtgacggat cgtagttggt gttagcagag atcgactgat
    17821 cgataaattt ctgcatgata cctaccagtt gcaggtagcc atcgttaccc ggcatttccc
    17881 acagcagctc ataggcgtcg tgcaggtgct cgtagtccgg caccacctgg cgcaaaatac
    17941 cgtctttcga cgctttgatg ctgacgtaac cgcgcggcgg ttcaataccg ttagtggcgt
    18001 tagagatctg cgaagaggtc tcggacggca tcagggcaga aagcgtggag ttacgcaggc
    18061 cgtgcgtttt gattgattca cgcaatgctt cccagtcgta atgcagcggc tcattagcga
    18121 tggcatccag atctttctta taggtatcga tcggcaggat ccctttcgcg taagtggttt
    18181 cgttaaacca cgggcactcg ccttgctctt tagccagctc attagacgct ttcagcaggt
    18241 aatactgaat cgcttcgaag gttttatgcg tcaggttgtt ggcgctgccg tcggagtagc
    18301 gtttaccgtg cttcgccagg tagtaagcga agttgatcac accaataccc agcgtacgac
    18361 gacccatcgc tccacgtttg gcggccggga tcgggtaatc ctgataatcc agcagcgcgt
    18421 caagtgcacg aaccgccaga attgccagct cttccagttc atccaggtta ttaattgcgc
    18481 ccaggttgaa agcagacagc gtacacagcg cgatttcacc gttctcgtcg ttgacgtcgt
    18541 tcagcggttt ggtcggcagg gctatctcca ggcacaggtt agactgacgc actggcgcga
    18601 tggccggatc aaacgggcta tgggtattac agtggtcaac gttctgaata tagatacgac
    18661 cggtagacgc acgttcctgc atcatcagcg agaacagctc aactgctttc acacgctgct
    18721 tgcggatgct gtcgtctttc tcatatttgg tatacagacg ttcaaactct tcctgatcgg
    18781 cgaagaacgc gtcgtacagc cccggtacgt cggacgggct gaacagggtg atatcttcac
    18841 ctttcagcag acgggtatac atcagtttgt tgatttgtac cccgtagtcc atatgacgca
    18901 cgcggttgcc ttccacacca cggttgtttt tcaacaccag caggctttcc acttccagat
    18961 gccacatcgg gtagaacagc gttgccgcac cgccgcgcac accgccctga gagcaggatt
    19021 tcaccgctgt ctggaaatgt ttgtagaacg gaatgcagcc ggtatggaac gcttcaccac
    19081 cgcgaatcgg gctacccagc gcacgaatac gcccggcgtt gatgccgatc ccggcacgct
    19141 gggaaacgta tttaacaatc gcgctggagg tggcgttgat ggaatccagg ctgtcaccgc
    19201 actcgatcag tacgcaggag ctgaactgac gagtcggggt acgcacgccg gacatgattg
    19261 gcgtcggcag cgaaatttta aatgtggaaa ccgcgtcgta aaaacgcttc acatattgca
    19321 ggcgcgtttc acgcgggtag ttcgagaaca ggcacgcggc aaccagaata taaaggaact
    19381 gggcgctctc atagatttcg ccggtcacgc ggttctgtac cagatatttg ccttccagct
    19441 gcttaacggc agcataagag aaggtcatat cacggtcgtg atcgataaac gtgtccatct
    19501 gcttgaactc ttcttccgtg tagtcttcca gcagatgatt atcgtatttg cccatctcga
    19561 ccattttcac cacgtggtcg tacagcgcag gcggctcaaa ctggccgtag gcttttttac
    19621 gcaggtggaa gatcgccagg cgcgcggcga gatactgata atccggcgca tcacgggaga
    19681 tcaggtctgc ggcagccttg ataatggttt cgtggatgtc agaggtcttg ataccgtcat
    19741 aaaactgaat gtgggagcgc agctcgacct gggaaatcga aacgttatgc agtccttctg
    19801 ccgcccaatc cagaacgcga tggattttgt cgagattgat gcgctctgtg ctaccgtcgc
    19861 gctttgtcac cagcagattc tgattcatgt atgtcgtacc tgtttttgga attctttccg
    19921 caatagtttc atgcagacta cctgtagtac gggaagctgc ttagaacact atatataggg
    19981 ggtatgtttg ggattcactg caagatagtg tgaaaatggc cctcttgcaa gtgcataact
    20041 ttgtggataa ctcaggaagg aaaaagtggc tttcgcgcac cttaggtcag acaaggtgtc
    20101 cgggaaagtc aatgggaaga gaaaaatttg ttaaaaataa ctgttcggcg atttcttgaa
    20161 cggtagaata ggttggataa attgatatag atggtttatt aatctttttg ctaatgattg
    20221 caaaaattga tctaagcacg agtcatcaca taatctgatg tatcagttgt ggtcaatata
    20281 taagcgaatg taagcgattg ttgatgtcga aatggttgtt ttctattcgg ttattgttaa
    20341 atgcgaagcc attttgttaa tttaccttat attataaaaa aattattcat tactttaatt
    20401 tagtttaaat ataactggta tcccttaagg ttattaactt gaattatgac gcactgatat
    20461 tattcatcaa ataataacaa aatagccatt gcatcgggtt ggacaattta caaaagaaag
    20521 ataacccata ttgtataatg cgtttaaata tgccgtctta tataaaatga tggtcagatt
    20581 aatatgcgga ttatctttct acg
//
LOCUS       DADKRT010000067        20258 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.068, whole genome shotgun sequence.
ACCESSION   DADKRT010000067 DADKRT010000000
VERSION     DADKRT010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20258
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.068"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(52..1084)
                     /locus_tag="JQ356_002024"
                     /pseudo
     CDS             complement(52..1084)
                     /locus_tag="JQ356_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phenylpropionate dioxygenase ferredoxin
                     reductase subunit"
     gene            complement(1094..1906)
                     /locus_tag="JQ356_002025"
     CDS             complement(1094..1906)
                     /locus_tag="JQ356_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate-dihydrodiol/cinnamic
                     acid-dihydrodiol dehydrogenase"
                     /protein_id="HAY4622121.1"
                     /translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA
                     SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA
                     ETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK
                     HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL
                     PLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL"
     gene            complement(1903..2223)
                     /locus_tag="JQ356_002026"
     CDS             complement(1903..2223)
                     /locus_tag="JQ356_002026"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-phenylpropionate/cinnamic acid
                     dioxygenase ferredoxin subunit"
                     /protein_id="HAY4622122.1"
                     /translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH
                     GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGSDIFIDLP
                     EAQP"
     gene            complement(2223..2741)
                     /locus_tag="JQ356_002027"
     CDS             complement(2223..2741)
                     /locus_tag="JQ356_002027"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HAY4622123.1"
                     /translation="MSAQVSLELHLRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTM
                     RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRPRHLISNC
                     QISETDIPNVFAVRVNYLLYQAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ
                     AVITSHNLSVLF"
     gene            complement(2738..4099)
                     /locus_tag="JQ356_002028"
     CDS             complement(2738..4099)
                     /locus_tag="JQ356_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit alpha"
                     /protein_id="HAY4622124.1"
                     /translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL
                     FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRA
                     FTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA
                     PGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKSPAEQFASDQYHALFSH
                     ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV
                     DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE
                     VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL
                     CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE
                     VMK"
     gene            4235..5125
                     /gene="hcaR"
                     /locus_tag="JQ356_002029"
     CDS             4235..5125
                     /gene="hcaR"
                     /locus_tag="JQ356_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HcaR"
                     /protein_id="HAY4622125.1"
                     /translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG
                     VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKTVQEDRQLTIGFVPSAEV
                     NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF
                     DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNI
                     VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM
                     KPALRDFIAIVQERLASVTA"
     gene            5285..6424
                     /locus_tag="JQ356_002030"
     CDS             5285..6424
                     /locus_tag="JQ356_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HAY4622126.1"
                     /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
                     LGAGLVARFLGSLLIAPRVSDPSRLISALRVLAMMTLLFAVAFWAGAHVAWLMLVMIG
                     FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYQVIL
                     ALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVLQNWRFLACVCLLQGAH
                     AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
                     GVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
     gene            complement(6416..7696)
                     /gene="csiE"
                     /locus_tag="JQ356_002031"
     CDS             complement(6416..7696)
                     /gene="csiE"
                     /locus_tag="JQ356_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HAY4622127.1"
                     /translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDD
                     DIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI
                     TSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
                     LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML
                     RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLF
                     AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN
                     DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP
                     YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA"
     gene            complement(7887..8741)
                     /locus_tag="JQ356_002032"
     CDS             complement(7887..8741)
                     /locus_tag="JQ356_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311427.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY4622128.1"
                     /translation="MALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
                     DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP
                     ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA
                     NILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP
                     LLLIHGKADHVIPWQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFI
                     LSALNPQN"
     gene            complement(8886..9689)
                     /gene="suhB"
                     /locus_tag="JQ356_002033"
     CDS             complement(8886..9689)
                     /gene="suhB"
                     /locus_tag="JQ356_002033"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HAY4622129.1"
                     /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
                     KAVEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
                     IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            9808..10548
                     /gene="trmJ"
                     /locus_tag="JQ356_002034"
     CDS             9808..10548
                     /gene="trmJ"
                     /locus_tag="JQ356_002034"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HAY4622130.1"
                     /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGNKAE"
     gene            10818..11306
                     /gene="iscR"
                     /locus_tag="JQ356_002035"
     CDS             10818..11306
                     /gene="iscR"
                     /locus_tag="JQ356_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HAY4622131.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL
                     RA"
     gene            11418..12632
                     /gene="iscS"
                     /locus_tag="JQ356_002036"
     CDS             11418..12632
                     /gene="iscS"
                     /locus_tag="JQ356_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311423.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HAY4622132.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG
                     WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
                     QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
                     LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
                     PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            12660..13046
                     /gene="iscU"
                     /locus_tag="JQ356_002037"
     CDS             12660..13046
                     /gene="iscU"
                     /locus_tag="JQ356_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HAY4622133.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLVEAQAIKNTDIAEELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            13063..13386
                     /gene="iscA"
                     /locus_tag="JQ356_002038"
     CDS             13063..13386
                     /gene="iscA"
                     /locus_tag="JQ356_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HAY4622134.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
                     ESFHV"
     gene            13482..13997
                     /gene="hscB"
                     /locus_tag="JQ356_002039"
     CDS             13482..13997
                     /gene="hscB"
                     /locus_tag="JQ356_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HAY4622135.1"
                     /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ
                     LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
                     DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            14014..15864
                     /gene="hscA"
                     /locus_tag="JQ356_002040"
     CDS             14014..15864
                     /gene="hscA"
                     /locus_tag="JQ356_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HAY4622136.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
                     LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQADIPDRSDNRVQRELLDAAIAAKI
                     ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
                     VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
                     LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
                     IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDNAA
                     AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV"
     gene            15866..16201
                     /gene="fdx"
                     /locus_tag="JQ356_002041"
     CDS             15866..16201
                     /gene="fdx"
                     /locus_tag="JQ356_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HAY4622137.1"
                     /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
                     YTINHAREH"
     gene            16213..16413
                     /gene="iscX"
                     /locus_tag="JQ356_002042"
     CDS             16213..16413
                     /gene="iscX"
                     /locus_tag="JQ356_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HAY4622138.1"
                     /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
                     DPQASNEKILEAILLVWLDEAE"
     gene            16591..17874
                     /gene="pepB"
                     /locus_tag="JQ356_002043"
     CDS             16591..17874
                     /gene="pepB"
                     /locus_tag="JQ356_002043"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HAY4622139.1"
                     /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
                     QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDN
                     RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
                     HTVGRASERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
                     DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS
                     ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
                     LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
     gene            18016..18792
                     /gene="sseB"
                     /locus_tag="JQ356_002044"
     CDS             18016..18792
                     /gene="sseB"
                     /locus_tag="JQ356_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708361.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HAY4622140.1"
                     /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE
                     AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
                     FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT
                     LFKTIKPVKRAFICSIKENEEAQPNLFIGIEADGDIEEIIQATGSVATDTLPGDEPID
                     ICQVKKGEKGISHFITEHIVPFYERRWGGFLRDFKQNRII"
     gene            complement(19285..20130)
                     /gene="sseA"
                     /locus_tag="JQ356_002045"
     CDS             complement(19285..20130)
                     /gene="sseA"
                     /locus_tag="JQ356_002045"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HAY4622141.1"
                     /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN
                     GHIPGAVFFDIEALSDHTSPLPHMLPRPKTFAVAMRELGVNQDKHLIVYDEGNLFSAP
                     RAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDV
                     LLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDE
                     LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP
                     VEPVK"
BASE COUNT         4826 a         5159 c         5517 g         4756 t
ORIGIN      
        1 tgatgccatt ctatttcagg aaggagtgtc cgttaaactc aggctacctc agtcatcgcc
       61 acgcatatcg ccaataaact gtaagttatc actgtactga tcgctccaga accacggcag
      121 tagcggtagc ggtagcccta acattgcggc agcggcaatt tgcgcctggt tattggcgtt
      181 ttcccagctt tcacagcggt gtagtgcacc attatcaaga cgagtgattg ccacatcgcc
      241 accggcaaag atcgcgggat cgcaggtgcg gcaagcctca tcaatgacaa tgccattggc
      301 agtatcaagg ttggcctcgc gagccagttg ctcgttggcg ctgataccaa taccgtaaat
      361 caccacatca gcctgaagcg tttccccact ttgcagcgtc agttctactt tttcaccatc
      421 gaccacatgt tcaatggcat tattgagcag aatgcgcaca ccagcctgct ggtggcgctg
      481 taaaagatag cgttgcacgg gcggtggtgc attacggccc atgacggttg ccgccagttc
      541 aatcactgtc accttacatc tgcgctgcgc tgcgctgcgc tgcgctgcgc tgcgtggcgc
      601 tggcagccag ttccagacca atagttccgg caccgacaat cacgactgac cgttcgggct
      661 gcagaacttc tcgcagtctg gcggcatcac cggcatggcg tagggtaaag cagcgttctc
      721 ccagtgcatc aagcaacggc agcggtcgag ctgccgcgcc ggttgctata aaaagctgat
      781 cccagtgcca gctttcgccg ttggttaaca ctaactctcg tgtgtcgcga cccagcgttt
      841 tgatggttac accggaatgc agatgaacat tgttttcctg ccaccagtta gcgggtaaca
      901 cctgctgtaa ctgcggggaa tcttccagca acatggattt cgagagtgga ggtcgttcat
      961 aaggaagatg tcgctcatcg gaaaacagat gcagctcacc ggtgaaccct tgctggcgta
     1021 gcgaggccgc agccattgcc gccgcttgca cgccaccgac aataatgatc gttttttctt
     1081 tcatcgtgct tccttaaaga tccagcccag ccgctacgtg gcgaatgccg cgaatcgcta
     1141 aacccgcatc agcgttgatc atcacaccgc ttaatgcgcg attattgcgc cgcgatgcca
     1201 acatcacata cggccccgta aaatccgccg gttgcgggaa aaattgcagc ggtaaaatgg
     1261 cggcaatttt ctccggcgtc agagactgca ttatcgaggt ttcactttgc ccgagcgcct
     1321 gtgggccgcg caggtcgctg gccataccac acgggccgac gccattcacc cgcactttcg
     1381 gtgccagttc ataagccagt tggcgaataa gtccggttgc ggcatgttta ctggcggtgt
     1441 acagcgggcc accgccgcca ggataccagg cggcatttga cagtgtgaaa atcatgctgc
     1501 cttcactggc gattaacgcc ggagcgcagg cttttgcgcc cagaaggtaa ccgagtacgt
     1561 tgacgttaaa cagctcgtgg aagccggttt cgagcgtctc tgcgggagta ttaaccagtg
     1621 aggcattgtg atcccagatg cctgcattgc cgataaaaca atccagcttg ccggaacgag
     1681 tcaggatctg atcgaccgcg cgttgataat cggcataaca ggtcacgtta ccttccaccg
     1741 ccagaatatg ttcgccaaat cgctgacgca gactggcgac ttttgccgcc gacagttcca
     1801 gcgtggcaac ctgcgcgcct tcttcgataa atcgctcgac cagcgccagc cctaatcccg
     1861 atccgccgcc ggtaataaaa atggactcgt tatgcagatc gctcatggct gcgcctccgg
     1921 taagtcgatg aaaatgtcac taccttcaac gtgtactgga taagtggtga gcggatcggt
     1981 ggcgggcagg cataacgctt tccccgtttt caggcaaaaa ctggcggcgt gtagcgggca
     2041 ctccaccgtg gcgtcatctt ccagataccc ttctgacatc gacgcattac catggctgca
     2101 acgatcgtta atggcataaa actcgccgcc aacgttgaac agggcgatga cgggcgaggt
     2161 atcgatccgg agagcctcac cctccggcac atccgcaacg ggacacgcat aaattcgatt
     2221 catcagaaca gtacactcag gttatgggaa gtgattaccg cttgatccag gacgatatcc
     2281 cgttccagca agcgccagtt gtcatcttcc agacggcgaa ctttgtcgaa acgcgttcca
     2341 acatagaatg tttcatcgcg ctctttttgt gcctgataaa gcagataatt tacccgcaca
     2401 gcaaatacgt ttgggatgtc ggtttcgctt atctggcagt tgctgattaa gtgacggggg
     2461 cgtgacggcg gctcttctgc ccaggccatg cccgtttcca gacgggcgat tcgccgctcc
     2521 agctggtctt tggtgtcatt aaaaatccag gttgtcggtg gctggacgcc tttgcggcgg
     2581 tcgcgtgttt gcgcgttaac tgtggtgcgc atggtgtaac gaatctcttc gtcgagctgc
     2641 gccagccagt cacgaaattt ccagtcgtcc agtaagctgg cttcgtgaaa gagaaactgg
     2701 ctaatgcgga gatgtaactc tagtgaaact tgcgcactca tttcatcacc tcctgctggt
     2761 aagcggcggt tttatcgagc acttcctgcc agctttcgct actcagaaga tcggcccagc
     2821 gttggtacat tccacgagcg gcagtttctg aaaagatata gttagtaatg ccaggaatgc
     2881 cgtcgtcgcg gcgcttttcc tgaccaagcc ccatttccag acacagtttg ctgttgcggg
     2941 cgcggtggcc tttaagcaat ttctggattt cacaccagtt ctccgagtca tcctgctcga
     3001 gaaaaccagc aggaccaaaa gcacgagtgg cgctgttttc aaaagcggct ttaacttcat
     3061 cggaggcggc tttgtcagta atacagaacg cccacacttc aacttgatca gggccgcgcg
     3121 gatgccagac gcggagtgtg gcagtgccgt ttagccatga aagcgtgggg aatatattgt
     3181 tatgacccgc caggcgcagg gcgcgaactt cacctaaacg ttgttctgct tcggcatagg
     3241 tttcgcggta atagctggaa accgcgccat cgacccagac attagcatcc ggtttttcag
     3301 taaagaagaa accgctaccg tgaccgtcct gaccaaattg cagcgcatct ttggcggttt
     3361 cccacaccgg gcgggcggtt tgtccatcac cgagacgctt atcgctgcca tcatctttcg
     3421 cccctaatac ctgaacggca gaagcatggc tgaacagagc atgatattgg tcactggcga
     3481 actgctctgc cggggatttc cagttacagt tgatcaccca cttttgtacg ccgccgacaa
     3541 tttcggtgcc gccttcgcga cgatccagca tgccatccag ataccaggca atgtcaccaa
     3601 ggtaatcacg caggcccggt gcgctggtat cccagttgcc aaaaatcagc cctttataac
     3661 tctccacaca aggaacttcg tttagccccc agtgggattt acacaaccct tgtgggtagg
     3721 cgcgaggttc cagcggtaca tcgatcaact cgccgttaat gccataagac cagccgtgat
     3781 acgggcaggt aaaggcgcga gtgttgccgc aatctgcata actcacacgc atggcccggt
     3841 ggcggcattg gttgagaaac gccttgatgc tgccgtcttt ctgacgcact acgacaaccg
     3901 catcttctcc catgtaggtg ttaaagaaat caccgggttt tgggatctgg ctttcgtggg
     3961 cgagaaatag ccagcaacga ccgaaaatac gctcaagctc cagttggtaa atatccgggt
     4021 cggtataaat acgcggagtg acccgaccat tttgggtgtc aatcagttgg taaatgttca
     4081 aatctgaggg tgtggtcata ttttttaatc ctgaaagata agatgtattg accttctatt
     4141 tttgtgccat aaggatgttg ctggttggtt gctaatatgt gaaatagtta atttctacca
     4201 gctgagacgt tttttcgata acaaggggaa ggtgatggaa ctacggcatt tacgctattt
     4261 cgtcgcagtg gcgcaggcac tgaactttac ccgtgcggcg gaaaaactgc atacctcaca
     4321 gccttcgtta agcagccaga tccgcgatct tgaaaactgt gtcggtgttc cgttactggt
     4381 gagggataag cgcaaagtcg cgttgacggc ggcgggagaa tgttttctcc aggacgcgct
     4441 ggcaatcctc gaacaagcgg aaaatgccaa attacgggcg cggaaaactg ttcaggaaga
     4501 cagacaatta accattggct ttgtgccatc ggcggaagtg aatttactgc caaaagtatt
     4561 accgatgttt cgtctcagac agccagacac cttgattgag ctggtgagtt taatcaccac
     4621 gcaacaggag gaaaaaattc gccgtggtga actcgacgtc ggcttaatgc gccatcctgt
     4681 ttatagcccg gagattgatt atctggagct ttttgacgaa ccattagtgg ttgtgttacc
     4741 ggttgatcac cctttagcac atgaaaaaga gatcaccgcc gcgcaactgg atggcgtgaa
     4801 tttcgtcagt accgatccgg cgtattccgg ttcgcttgcg ccgatcgtta aagcgtggtt
     4861 tgcgcaagaa aacagccagc caaatatcgt ccaggtggca acgaatattc tggtgaccat
     4921 gaatctggtg ggcatggggc tgggcgtcac tttgataccc ggttatatga ataattttaa
     4981 taccggacag gttgtttttc gtcccattgc cggaaatgtg ccttccattg ctttactgat
     5041 ggcgtggaag aaaggggaga tgaagccggc attacgcgat ttcatcgcca ttgtgcagga
     5101 acgtttggca agcgtaacgg cataattacg cattattttt gcaacatgcg tcgcggatcg
     5161 cagtttttta gtgcttgtga actggcgtta cagacatcgg gaagcaggct cgaatattct
     5221 tatttttcaa cttgcaccaa cattcgatta accccagact aacgcctcct gacgggaggg
     5281 actcatggtt ttgcaatcca cgcgctggtt ggcgctcggc tatttcacat acttttttag
     5341 ttacggcatt tttctacctt tctggagcgt ctggcttaaa gggattggtt taacgccaga
     5401 aaccatcggc ctgttattgg gggcaggtct ggttgcccgt tttctcggga gtttgctcat
     5461 cgcgccccgc gtcagcgatc cttctcgcct gatttccgcc ttgcgcgtgc tggcaatgat
     5521 gacacttctc tttgctgtcg ccttctgggc gggggcgcac gtagcgtggc tgatgctggt
     5581 gatgattggc tttaacctct ttttctcacc gctggtaccg ttgaccgatg cactggcgaa
     5641 tacgtggcaa aagcagttcc cgcttgatta cggcaaagtg cgactgtggg gctcggtggc
     5701 gtttgtcatt ggctcggcgc tgacgggcaa actggtcact atgtttgatt atcaggtgat
     5761 cctcgcgctg ttaacattgg gcgtggcatc catgctgctc ggctttctca tccgtccgac
     5821 gattcagcca caaggggcaa gccgccagca ggagagcacc ggttggtcag cgtggttggc
     5881 gctggttctt cagaactggc gctttctggc ctgcgtttgt ttattgcagg gggcacatgc
     5941 ggcctattac ggttttagcg ccatttactg gcaggcagct ggctactcgg cctcggcggt
     6001 ggggtatttg tggtcgctgg gcgtggtggc ggaagtcatt atctttgcgc tgagtaataa
     6061 acttttccgc cgttgtagtg cacgcgatat gctgttgatc tcggcgattt gcggcgtagt
     6121 gcgctggggc attatgggag caactacggc gttgccgtgg ttgatagtgg tgcaaattct
     6181 gcattgcggc accttcacgg tctgccacct ggccgccatg cgctatattg ccgctcgcca
     6241 gggtagcgaa gtcatccgtt tacaggcggt ttactctgcc gtcgcgatgg gcggcagtat
     6301 agctatcatg accgttttcg ccggtttcct gtatcaatat ctgggccacg gcgtgttctg
     6361 ggtaatggcg ctggtggcgc ttccggcaat gtttttgcgc ccgaaagttg ttccctcatg
     6421 ctgattcgag cattttgcgg atctgctcct gttgatgtgt tgtcagtgtc aggtccgtat
     6481 agatcagcgg tggtgaaaag agcggtaacg gcatggtata aggcgcaata atcagtgccg
     6541 cgccgcgcgg agcgcctgtc tgcaaaaatg cctttaccga catatgttta atgttgagcg
     6601 gcagtaacgt tagttcgcgt aactgctgct caatctgcgc ttctcgctcg ctatcattcc
     6661 cggtaagaag aataatctgt ttttcatgca gatcgttttc ctgcattagc caggcaccga
     6721 aaatcaccgc gaccagacca ctttcctcat cagaaagatg gacgccgtat tcactttcaa
     6781 atccggccag cgccgcgcgg gtggtgcgca ccaggcgtgg gtacagtctg gcgaactctt
     6841 ctggcagggt attatcaata ccgatggcaa acaaactgcg atttaacgcc tgggcgaggt
     6901 gggtataaag ctgatcgcat aacccctgtt catcataaaa acgaacattt cccagctcac
     6961 gaaaatggtt taccagacgt ttgatagact gacgcaattg tctgtctcgc tgatgcgcat
     7021 cacgcaatgg atcgggaacc cgcaacatgg aaaaaagtaa tgccataaac agtggctcat
     7081 caggcggtac aggctggagc gcccgacgct gccagtggcg tccaatttcc tgcgctacct
     7141 gaaattcaag gcaggattcc gcccagcgac gttggagcgg attaaactga ggcgtaattc
     7201 cagcgtggtg ttgcagcaaa caatattgca gatacagaca caggaaatga atatcgcgcg
     7261 tttcaaagcg tttttgcagc cgtcgggagc agagattcac taacgcttgt agattggtat
     7321 cgtcgtaaaa gttacgcgca attccgcgcc gcttcagttc actcttcagg gcgggggtga
     7381 attggctggt aataaatgac ggacacagac ggaaaccacg tcgtagccag tgaaataaac
     7441 acaaacgttg gttaagcact gtaccttcaa cccggtagct accgtcataa ccagtcgtca
     7501 gtgtgagttg atgatagcgc aggatctccc gtcctgtttc gctgatatca agactggcaa
     7561 tatcatcatc cacaccatta agctcgctga aggttgccat ggtggcggtc aaccccggct
     7621 gaaagagcgt cagcaagatc tggcagcggc gctggggagc cgaaaggaca gatggtggag
     7681 caagcgtagg catcatctgt agatctccca taagcataat tgataagaat agctaaagtt
     7741 tgctcaggta aatggcgaag ggaatgctaa tcatcagaaa tgttggcaag cgtcacagaa
     7801 tttttctcat cttaaactgt tctgaccagt ggattagcat gtcttaaggt ggttttgtga
     7861 atgattatcg tgctagcgat catgggttag ttctgcggat tcaacgcgct aaggataaag
     7921 tccaccatct gttcgcgata aacatcgccg tgacgatcgg aaaaagcatc aatgtgttcg
     7981 ccatccggga ttaggatcaa ccgttttgtc tcttttgcca ggctatacaa cttttcgctg
     8041 tgctgccatg ggataacgtg atcagcttta ccgtgaatga gtaaaagcgg gatcgggctg
     8101 acgctggcga tataattttc gccgctgtaa ctctcatcaa gtaagtagcc actgccgggg
     8161 atcatctgat tggcgatggt tgcataagag gcaaatgtgg agtcgaggat caccgcacgt
     8221 atgccttcac gatcatcctg accaataaca gcaagaatat tcgccccgcc aatactctgc
     8281 ccgaacagca ccagccgttg tgggtttaca tcactgcgat ggcgcaccac attgatggca
     8341 ctttgcgtat cgtccagcaa tccggcctgg gacggcgtgc cttttgattt accaaacccg
     8401 cgataatcaa acataaaaac gttgaaatta cgctcgggta accaactgac cagcggccag
     8461 tgggcggaca tatttccggc attgccgtga gcatgaatga tggttgcgat ggcattgtca
     8521 gcagggcccg tcgaagaagg aataaaccag ccttgcagac gagtaccgtc cttagccgta
     8581 aattcgacgg attccgccga ccaggggtcg ggaccgtaaa ttttatcgtc aggataatag
     8641 aagaagttga tggcaacgcg cggcactaaa taaacgcaga aggcaacaac aaagagaata
     8701 aacagaattt tgagaacgcg tttgttcact ggcagcgcca taacctttcc ttgtgacttc
     8761 tttatcatcc attaatcggg gaaagatggt gggagagtga cgaaagaaag taaagcggtg
     8821 aggaagtatt tcggaatagc gcctgaaagg cgagggcggg tgagtgacat cacccgcctg
     8881 agtcattaac gcttcagagc gtcgcttaac tcatcacgca tgttcgccag catggctttc
     8941 acaacacgcg ggttaccagc aacgatgtta ccggtcagca tatagttatg accaccggtg
     9001 aagtcgctga cgatgccgcc cgcttcacga accagcagct cgcctgccgc gaaatcccac
     9061 ggacgcagac cgatttcaaa gaaaccgtca acacgacccg cagcgacgta agccagatcc
     9121 agcgccgcag aaccggtacg acggaagtct gcacattcgt tgaacagttt gccgacgatg
     9181 ttgatgtagg tagtggcgta ctgttttgct ttgaacggga agccggtcgc cagaatggta
     9241 ccgtcgagat cgcgagcggt gctaccgcgc agacggtagc cgttcagctg tgcgccctga
     9301 ccgcgagtgg cggtgaacag ttcgttacgc ataggatcgt ataccacagc aacttcggtg
     9361 cggcctttga tacgaacggc gatagatacc gcgaagtgcg gcagacgttt gataaagttg
     9421 gtagtaccat ccagtggatc gataacccat tgaacatcct gatcagtacc ttcaagttca
     9481 ccgctttctt cggtgatgat ggtgtgctgt gggtaagatt tacgaatcgt gtcgataatc
     9541 accgcttcga cagctttatc tacgttggtc acgaaatcgt tactgccttt ctggctcgct
     9601 tctacagcgt ccggggtttc atagtttttg gcaattaaat tacccgcctt gcgcgctgcg
     9661 cgcacggcga tgttcagcat cggatgcatc ggtctctctc actggatgtt aaagaacggg
     9721 aaaacggcgc agagtatagc agcgagatcg gcatctgtct tcgttttatg ataagatgcg
     9781 tgaataatct ttagatgaag aaagacaatg ctgcaaaata ttcgaattgt gctggtggag
     9841 acgtcacaca ccggcaatat gggttctgtt gcccgtgcca tgaaaacaat gggattaacc
     9901 aatctgtggc tggttaatcc actggtgaaa cccgactccc aggcgattgc cctggcagca
     9961 ggggccagcg atgtgattgg taatgctcac atcgtcgata cgctcgacga agcgttagcc
    10021 ggttgtagct tggtggtggg caccagcgca cgttcccgca cgctgccatg gccgatgctc
    10081 gacccgcgcg aatgcggcct gaaaagcgtc gctgaagcgg caaatacccc ggtggcgctg
    10141 gtgtttggtc gcgagcgcgt cggcttgacc aatgaagagt tgcagaaatg ccattatcat
    10201 gtcgcgattg cggctaaccc ggaatacagc tcgctgaacc tggcgatggc ggttcaggtt
    10261 attgcctatg aagtgcgcat ggcctggctg gcaactcagg aaaacggcga gcaggtcgag
    10321 catgaagaga cgccgtatcc gctggtcgat gatctggagc gtttttatgg tcatctggaa
    10381 caaacgctgc tggcaaccgg ttttatccgt gaaaaccatc cggggcaggt gatgaataaa
    10441 ttgcgccgtc tgtttacccg tgcgcgcccg gaaagccagg aattgaatat cctgcgcggg
    10501 attctggctt ctattgagca gcagaataaa ggtaacaagg ccgaataaca gtagttgcct
    10561 gatgcgacgc ttaacgcgtc ttatcaggcc tacaatgtac agaaccgtag gtcggataag
    10621 gtgttcacac cgcatccgac aacaggtaca aacgccacga taaaaaaatg gcactgaagg
    10681 ttaaataccc gactaaatca gtcaagtaaa tagttgacca atttactcgg gaatgtcaga
    10741 cttgaccctg ctattcaata cccccacttt tacaataaaa aaccccgggc aggggcgagt
    10801 ttgaggtgaa gtaagacatg agactgacat ctaaagggcg ctatgccgtg accgcaatgc
    10861 ttgacgttgc gctcaactct gaagcgggcc cggtaccgtt ggctgatatt tccgaacgtc
    10921 agggcatttc cctttcttat ctggaacaac tgttttcccg tctgcgtaaa aatggtctgg
    10981 tttccagcgt acgtggacca ggcggtggtt atctgttagg caaagatgcc agcagcatcg
    11041 ccgttggcga agtgattagc gccgttgacg aatctgtaga tgccacccgt tgtcagggta
    11101 aaggcggctg ccagggcggc gataaatgcc tgacccacgc gctgtggcgt gatttgagcg
    11161 accgtctcac cggttttctc aacaacatta ctttaggcga actggttaat aaccaggaag
    11221 tgctggatgt gtctggtcgt cagcatactc acgacgcgcc acgcacccgc acacaagacg
    11281 cgatcgacgt taagttacgc gcttaataaa aagaattcag aatcaggccg gagtgctaaa
    11341 tactccgtaa acacggtcgt acatccagcc ggtagcctga ttccttgcat tgagtgatgt
    11401 acggagttta tagagcaatg aaattaccga tttatctcga ctactccgca accacgccgg
    11461 tggacccgcg tgttgccgag aaaatgatgc agttcatgac gatggacgga acctttggta
    11521 acccggcctc tcgttctcac cgtttcggct ggcaggctga agaagcggta gatatcgccc
    11581 gtaatcagat tgccgatctg gtcggcgctg atccgcgtga aatcgtcttt acctctggtg
    11641 caaccgaatc tgacaacctg gcgatcaaag gtgcagccaa cttttatcag aaaaaaggca
    11701 agcacatcat cactagcaaa accgaacaca aagcggtact ggatacctgc cgtcagctgg
    11761 agcgcgaagg ttttgaagtc acctacctgg caccgcagcg taacggcatt atcgacctga
    11821 aagaacttga agcagcgatg cgtgacgaca ccatccttgt ttccatcatg cacgtaaata
    11881 acgaaatcgg cgtggtgcag gatatcgcgg ctatcggcga aatgtgccgt gctcgtggca
    11941 ttatctatca cgttgatgca acccagagcg tgggcaaact gcctatcgac ctgagccagt
    12001 tgaaagttga cctgatgtct ttctccggtc acaaaatcta tggcccgaaa ggtatcggtg
    12061 cgctgtatgt acgtcgtaaa ccgcgcgtac gcatcgaagc gcaaatgcac ggcggcggtc
    12121 acgagcgcgg tatgcgttcc ggcactctgc ctgttcacca gatcgtcgga atgggcgagg
    12181 cctatcgcat cgcaaaagaa gagatggcga ccgagatgga acgtctgcgc ggcctgcgta
    12241 accgtctgtg gaacggcatc aaagatatcg aagaagttta cctgaacggt gacctggaac
    12301 acggtgcgcc gaacattctc aacgtcagct tcaactacgt tgaaggtgag tcgctgatta
    12361 tggcgctgaa agacctcgca gtttcttcag gttccgcctg tacgtcagca agcctcgaac
    12421 cgtcctacgt gctgcgcgcg ctggggctga acgacgagct ggcacatagc tctatccgtt
    12481 tctctttagg tcgttttact actgaagaag agatcgacta caccatcgag ttagttcgta
    12541 aatccatcgg tcgtctgcgt gacctttctc cgctgtggga aatgtacaag cagggcgtgg
    12601 atctgaacag catcgaatgg gctcatcatt aatcggtatc ggaatcagga gaatttataa
    12661 tggcttacag cgaaaaagtt atcgaccatt acgagaatcc gcgtaacgtg ggttcctttg
    12721 acaacaacga cgagaacgtc ggcagcggca tggtgggtgc accggcctgt ggcgacgtga
    12781 tgaagttgca gattaaagtc aacgatgaag gtatcattga agacgcgcgt tttaaaactt
    12841 acggctgcgg ttctgctatc gcttccagct ccctggtcac cgaatgggtg aaagggaagt
    12901 ctctcgtcga agcgcaggcg atcaaaaaca ccgatattgc tgaagaactt gaactgccgc
    12961 cggtgaaaat tcactgttct attctggcag aagacgcgat caaagccgcc attgcggact
    13021 ataaaagcaa acgtgaagca aaataagagt tgaggtttgg ttatgtcgat tacactgagc
    13081 gacagtgcag cagcgcgagt aaataccttt ctggctaacc gcggcaaagg gtttggcctg
    13141 cgtctgggcg tgagaacctc cggatgttca ggtatggctt atgtactgga atttgttgac
    13201 gaaccgacgc cggaagacat cgtgtttgaa gacaaaggcg tgaaagtcgt ggtcgatggc
    13261 aaaagcctgc aatttctgga cggtacgcag ctggacttcg taaaagaagg cctgaatgaa
    13321 gggtttaaat tcaccaaccc gaacgttaaa gatgagtgtg gttgcggcga aagcttccac
    13381 gtttgatgcg cataccgata accccaccgt ggtcgcctgc gcgtggggtt tgttttacct
    13441 gattcgccgt tatcgcggcg gatcgcagcc ctgagaatgt tatggattac ttcaccctct
    13501 ttggcttgcc tgcccgttat caactcgata cccaggcact gagcctgcgt tttcaggatc
    13561 tacaacgtca gtatcatcct gataaattcg ccagcggaag ccaggcggaa caactcgccg
    13621 ccgtacagca atctgcaacc attaaccagg cctggcaaac gctgcgtcat ccgttaatgc
    13681 gcgcggaata tttgctttct ttgcacggtt ttgatctcgc cagcgagcag catactgtgc
    13741 gcgacaccgc gttcctgatg gaacagctgg agctgcgcga agaactggac gagatcgaac
    13801 aggcgaaaga tgaagcgcgg ctggaaagct ttatcaaacg tgtgaaaaag atgtttgata
    13861 cccgccatca gttgatggtt gaacagttag acaacgagac gtgggacgcg gcggcggata
    13921 ccgtgcgtaa gctgcgtttt ctcgataaac tgcgaagcag tgccgaacaa ctcgaagaaa
    13981 aactgctcga tttttaattt ctggaagcta aacatggcct tattacaaat tagtgaacct
    14041 ggtttgagtg ctgcgccgca tcagcgtcgt ctggcggccg gtattgacct gggcacaacc
    14101 aactcgctgg tagcgacagt gcgcagcggt caggccgaaa cgttagccga ccatgaaggc
    14161 cgtcacctgc tgccatctgt tgttcactat caacagcaag ggcattcggt gggttatgac
    14221 gcgcgtacta acgcagcgct cgataccgcc aacaccatta gttctgttaa acgcctgatg
    14281 ggacgctcgc tggctgatat ccagcaacgc tatccgcatt tgccttatca attccaggcc
    14341 agcgaaaacg gcctgccaat gattgaaacg gcggcggggc tgctgaaccc ggtgcgcgtt
    14401 tctgcggaca tcctcaaagc actggcggcg cgggcaactg aagccctggc aggcgagctg
    14461 gatggtgtcg ttatcaccgt tccggcgtac tttgacgatg cccagcgtca gggcaccaaa
    14521 gacgcggcgc gtctggcggg gttgcatgtt ctgcgcttac ttaacgaacc gaccgctgcg
    14581 gctatcgcct acgggctgga ttccggtcag gaaggcgtga tcgccgttta tgacctcggt
    14641 ggcgggacgt ttgatatttc cattctgcgc ttaagtcgcg gcgtgtttga agtgctggca
    14701 accggcggtg attccgcgct cggcggcgat gatttcgacc atctgctggc ggattacatt
    14761 cgcgagcagg cggacattcc tgatcgtagc gataaccgcg ttcagcgtga actgctggat
    14821 gccgccattg cagccaaaat cgcgctgagc gatgcggact ccgtgaccgt taacgttgcg
    14881 ggctggcagg gcgaaatcag ccgtgaacaa ttcaatgaac tgatcgcgcc actggtaaaa
    14941 cgaaccttac tggcttgtcg tcgtgcgctg aaagacgcgg gcgtagaagc tgatgaagtg
    15001 ctggaagtgg tgatggttgg cggttctact cgcgtgccgc tggtgcgtga acgggtaggc
    15061 gaatttttcg gtcgtccacc gctgacttcc atcgacccgg ataaagtcgt cgctattggc
    15121 gcggcgattc aggcggatat tctggtgggt aacaagccgg acagcgaaat gctgctgctt
    15181 gatgtgatcc cactgtcgct gggcctcgaa acgatgggcg gcctggtgga gaaagtgatt
    15241 ccgcgtaata ccactattcc ggtggcccgc gctcaggatt tcaccacctt taaagatggt
    15301 cagacggcga tgtctatcca tgtaatgcag ggtgagcgcg aactggtgca ggactgccgc
    15361 tcactggcgc gttttgcgct gcgtggtatt ccggcgctac cggctggcgg tgcgcatatt
    15421 cgcgtgacgt tccaggtcga tgccgacggt cttttgagcg tgacggcgat ggagaaatcc
    15481 accggcgttg aggcgtctat tcaggtcaaa ccttcttacg gtctgaccga tagcgaaatc
    15541 gcttcgatga tcaaagattc aatgagctat gccgagcagg acgtaaaagc ccgtatgctg
    15601 gcagaacaaa aagtagaagc ggcgcgtgtg ctggaaagtc tgcacggcgc gctggctgct
    15661 gatgccgcgc tgttaagcgc cgcagagcgt caggtcattg acaatgctgc cgctcacctg
    15721 agtgaagtgg ctcagggcga tgatgttgac gccatcgaac aagcgattaa aaacgtagac
    15781 aaacaaaccc aggatttcgc cgctcgccgc atggaccagt cggttcgtcg tgcgctgaaa
    15841 ggccattccg tggacgaggt ttaatatgcc aaagattgtt attttgcctc atcaggacct
    15901 ctgccctgat ggcgctgttc tggaagctaa tagcggtgaa accattctcg acgcagcgct
    15961 gcgtaacggt atcgagattg aacacgcctg tgaaaaatcc tgtgcttgca ccacctgcca
    16021 ctgcatcgtt cgtgaaggtt ttgactcgct gccagaaagc tcagagcagg aagacgacat
    16081 gctggacaaa gcctggggac tggagcccga aagccgttta agctgccagg cacgcgttac
    16141 cgacgaagat ttagtagtcg aaatcccgcg ttacactatc aaccatgcgc gtgagcatta
    16201 acagaggtta gtatgggact taagtggacc gatagccgcg aaattggcga agcactgtac
    16261 gatgcgtatc ctgatcttga tccgaaaacg gttcgattca ccgatatgca tcagtggatt
    16321 tgcgatctgg aagatttcga cgacgacccg caggcatcca acgagaaaat cctcgaagcg
    16381 attttgttag tctggctgga cgaggccgaa taatttccgc gtcatgcttc acgccgcaga
    16441 tgcgttggct gcgctcgttc accccagtca catagttatc tatgctcctg gggcttcact
    16501 cacttgccgc cttcctgcaa cgcgaatcat ttagcggaaa aatcctgggg ctgccaactg
    16561 gcggcccttt tacaaagaag gataactaaa atgacagaag cgatgaagat taccctctct
    16621 acccaacctg ccgacgcgcg ctggggagaa aaagcaactt acagcattaa taatgacggc
    16681 attaccctgc atttgaacgg ggcagacgat ctggggctga tccagcgtgc ggcgcgcaag
    16741 attgacggtc tgggcatcaa gcatgttcag ttaagcggtg aaggctggga tgcggatcgc
    16801 tgctgggcat tctggcaagg ttacaaagcc ccgaaaggca cgcgtaaagt ggagtggccg
    16861 gatctggacg atgcccagcg ccaggaactg gataaccgcc tgatgatcat cgactgggtg
    16921 cgtgacacca tcaacgcacc ggcagaagaa ttgggaccat cgcaactggc acagcgtgct
    16981 gttgatctga tcagcaacgt cgcgggcgat cgtgtgactt atcggatcac caaaggcgaa
    17041 gatctgcgtg agcaaggtta tatggggctg cacaccgtcg gacgcgcttc agaacgttct
    17101 ccggtattgc tggcgctgga ttacaaccca actggcgata aagaagcgcc agtgtacgcg
    17161 tgcctggtag gtaaaggtat cacttttgac tccggcggct acagcatcaa acagactgcg
    17221 tttatggact cgatgaagtc ggacatgggc ggcgcggcaa cggttaccgg ggcgctggca
    17281 tttgccatta cgcgcggact gaacaagcgc gtgaagctgt tcctctgctg tgcggataac
    17341 ctgattagcg gcaatgcgtt caagctgggc gatatcatca cctatcgcaa cggtaaaaaa
    17401 gttgaagtga tgaacactga tgccgaaggg cgtctggtgc ttgccgatgg tctgattgat
    17461 gccagtgcgc agaaaccgga aatgatcatt gatgcggcga ccctcaccgg ggcggcgaaa
    17521 actgcgctgg gtaatgatta tcacgcgctg ttcagttttg acgatgcgct tgccggtcgt
    17581 ttgctggcga gtgcctcaca agagaacgaa ccattctggc gtctgccgct ggcggaattc
    17641 caccgcagcc agctgccgtc taactttgcc gaactgaaca ataccggaag cgcggcgtat
    17701 ccggcaggcg cgagcacggc ggcgggcttc ctgtcgcact ttgttgagaa ctatcagcaa
    17761 ggctggctgc atatcgactg ctcggcgact taccgtaaag cgccggttga acagtggtct
    17821 gcgggcgcta cgggacttgg tgtgcgcacg atagctaatc tgttaacggc gtaaactaat
    17881 atgccggatg cggcgtaaac gccttatccg gcctacaaat tctgcaaatt caacaaattg
    17941 cgaatccctt gtaggcctga taagcgtagc gcatcaggca tttgcgcccc gaacgttgaa
    18001 tgaattgtgg ttcttatgtc cgaaacaaaa aacgaacttg aagacctgct ggaaaaagca
    18061 gcaaccgaac cggcacaccg cccggccttt ttccgtactc tactggaatc caccgtctgg
    18121 gtgcctggta cggcggcgca gggcgaggct gtggttgaag atagtgcgct tgatttacag
    18181 cactgggaaa aagaagacgg caccagcgtc attccttttt tcacctcgtt agaagcgctt
    18241 caacaggcgg ttgaagacga acaggcattt gtcgtaatgc ccgttcgcac attgtttgag
    18301 atgacccttg gcgaaacgct cttccttaat gccaaactgc cgaccggtaa agaatttatg
    18361 ccgcgtgaaa tcagtttgtt gattggtgaa gagggaaatc cgctgagcag ccaggaaatc
    18421 ctggaaggcg gtgaatcgct gatattatcg gaagttgcag agccgccagc acaaatgatt
    18481 gattcactca ccaccttatt taaaaccatt aagccggtga agcgtgcttt tatttgttca
    18541 attaaagaga acgaagaggc acagcctaat ttatttattg gcattgaagc cgatggtgat
    18601 atcgaagaaa ttattcaggc gacgggaagt gtagcgaccg atacattacc tggcgatgaa
    18661 ccaatcgata tttgtcaggt gaaaaaaggg gaaaaaggaa ttagccactt tattaccgaa
    18721 catattgtgc cattctatga acgtcgctgg ggaggttttt tgcgtgactt taaacaaaac
    18781 cggataatct aaaatatgcc gccctaaagg gcggcattcg ggcttacttg ctgctctgaa
    18841 ggttgttaac caccagtaaa ttgtcgccgg agagactccg gttattattt acttgggaaa
    18901 acagcgcacc agaaacaata agtacgatac agaagcaccg tatcttcatt gtgcggtcca
    18961 tgcgaagacc gcatcacgac agcaccactg gcgatattgc cgttagagca agcgctgaga
    19021 cgcgcttgct ctaacggtcg cggaacatcc tttccttaag ccagcgcccg cttgcgagac
    19081 ggcggaaagg gccgcagtgg ataatatact aacagaacaa taataactct cttttgcttg
    19141 acaaaaagag agttactggc gagtattgtc tccgctgaga cgcgcttgca ttactacggt
    19201 aatacaacct gctggaaagg ccgcgaacca gaccagcaat aaaaaaccgc caaattcggc
    19261 ggttttttat tgcctgtaaa atacttattt cactggctca accggtaaat ctgcccgcgc
    19321 gccccattca ctccatgcgc cgtcgtacag tttcacgttt ggcacatcca gcgtcgcgag
    19381 tgctaacaaa accacggctg ccgttacacc agagccgcag ctgacgataa ttggtttgtc
    19441 gtagctgacg ccgcgaccaa aaaatatcgc atccagttca tcggtcgttt ttagttcgcc
    19501 ttcgcgcacc agttccgtcc acggcacatt cagtgctccg ggaatatgtc cgcgacgtaa
    19561 acctgggcga ggttcatcaa cttctgcgtt aaaacgtgca gccgggcggg catcaataat
    19621 ttgcgccgta ttttcatggc ttgccaataa tacatcggtt actttcacca cggcttcagg
    19681 attaaacgcg gcgttaaact ctccttccgg cagctctact gcaccttctt ctaacagcag
    19741 atcatcgcgc tgccagcctg caagtccacc ccccagaatc gacactttct ctacaccaaa
    19801 ggtgcgcagc atccaccatg ctcgtggggc tgagaaaaga ttaccttcgt catagacaat
    19861 caggtgctta tcctggttaa cgcctaattc acgcatcgcc acggcgaacg ttttcgggcg
    19921 cggcagcatg tgcggaagcg gggaagtgtg atcagaaagc gcttcgatat caaaaaacac
    19981 tgcgccggga atatgtccat tcagatactc ctgagcaacg ttacgatctt cctgtccagg
    20041 cgacgccatg cgggcatcga taatctgaat ttccgggtca tcaatatgtt cggcgagcca
    20101 gtcggctcct acaaaccatg tcgtggacat aggcatctcc atttttgccg gggttaggct
    20161 aaattgtcgg atgtttagtg aaaagcgaca agcgaaagag gctgatttgg ctgtctgagc
    20221 cacaattctc actaaaattc ggattgtatg ggcgtgat
//
LOCUS       DADKRT010000068        20027 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.069, whole genome shotgun sequence.
ACCESSION   DADKRT010000068 DADKRT010000000
VERSION     DADKRT010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20027
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.069"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..309
                     /locus_tag="JQ356_002046"
     CDS             <1..309
                     /locus_tag="JQ356_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY4622142.1"
                     /translation="IIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEG
                     KGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL
                     "
     gene            306..713
                     /locus_tag="JQ356_002047"
     CDS             306..713
                     /locus_tag="JQ356_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HAY4622143.1"
                     /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
                     LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSL
                     WRTGEVIDGNIVFSPSGWSDFCPLKERALCQLP"
     gene            698..1021
                     /locus_tag="JQ356_002048"
     CDS             698..1021
                     /locus_tag="JQ356_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY4622144.1"
                     /translation="MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASR
                     NQYQQLWRHGWQQTQLRAISPPANWQVNRLQTSQAGCVSISVTLVSPGGREGEMTRLH
                     CPNRQ"
     gene            1034..4402
                     /gene="recC"
                     /locus_tag="JQ356_002049"
     CDS             1034..4402
                     /gene="recC"
                     /locus_tag="JQ356_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HAY4622145.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
                     LEHEDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGE
                     AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
                     LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
                     FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
                     LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
                     LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
                     LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRLWVNESGIRWGIDD
                     DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
                     GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGLSIQDNS
                     ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE
                     RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
                     FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
                     IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
                     SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
                     MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDNI
                     WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
     gene            4578..7466
                     /gene="ptrA"
                     /locus_tag="JQ356_002050"
     CDS             4578..7466
                     /gene="ptrA"
                     /locus_tag="JQ356_002050"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HAY4622146.1"
                     /translation="MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQY
                     QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
                     QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
                     KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
                     GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
                     ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
                     PQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIP
                     DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQ
                     VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
                     FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
                     TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTQARDVQKQLGADGSEWCRNKDVVVD
                     KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTTEAKLRAMKPDEFAQIQQ
                     AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
     gene            7459..11001
                     /gene="recB"
                     /locus_tag="JQ356_002051"
     CDS             7459..11001
                     /gene="recB"
                     /locus_tag="JQ356_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HAY4622147.1"
                     /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
                     EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
                     ASRHAQIVARIATVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEE
                     TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAE
                     IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
                     PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
                     CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
                     VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
                     ALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
                     RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
                     IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPKSVDLAEVERLAED
                     LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
                     IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
                     GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
                     VQEKLELGGFESQWEPVLTEWITAVLQAPLNEKGVSLSQLSDRDKQVEMEFYLPISEP
                     LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
                     DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
                     DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
     gene            11001..12827
                     /locus_tag="JQ356_002052"
     CDS             11001..12827
                     /locus_tag="JQ356_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecBCD enzyme subunit RecD"
                     /protein_id="HAY4622148.1"
                     /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
                     DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
                     CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
                     ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
                     ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
                     PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG
                     THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
                     IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
                     VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
                     RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
                     YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
     gene            complement(12889..14220)
                     /gene="argA"
                     /locus_tag="JQ356_002053"
     CDS             complement(12889..14220)
                     /gene="argA"
                     /locus_tag="JQ356_002053"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HAY4622149.1"
                     /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
                     IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
                     TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
                     IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
                     GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS
                     GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
     gene            14452..15705
                     /locus_tag="JQ356_002054"
     CDS             14452..15705
                     /locus_tag="JQ356_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HAY4622150.1"
                     /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
                     SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
                     VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
                     YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
                     ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
                     QEVAESILAGIKAYFADGATLARRG"
     gene            15965..16144
                     /locus_tag="JQ356_002055"
     CDS             15965..16144
                     /locus_tag="JQ356_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HAY4622151.1"
                     /translation="MIIEKVMNNNCVQASVNGQEVIISGPGVGYNKNMVCRSLSILQT
                     GFFMSEMSKKINSTN"
     gene            16069..16788
                     /locus_tag="JQ356_002056"
     CDS             16069..16788
                     /locus_tag="JQ356_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HAY4622152.1"
                     /translation="MSVPEHPANRIFYVRNEQKNKLYKLIEHVGIEYIFVAEKIVHYA
                     ESNLEKKLNPSLLLILADHISNAISRVVSGIQINNVFLEEIKALYKAEYAISRDALTI
                     INEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQKITELIEVVYNRRVDRS
                     SFNYSRFMMHLKYFSSRVLCNEKIKQKNIGDIYEQFLEKDFQLQRAIHEIERYLYATF
                     KYDLILEEKLYLSIRIKVLMD"
     gene            16820..18400
                     /locus_tag="JQ356_002057"
                     /pseudo
     CDS             16820..18400
                     /locus_tag="JQ356_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031400.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
     gene            18400..19608
                     /locus_tag="JQ356_002058"
     CDS             18400..19608
                     /locus_tag="JQ356_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000382418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative C-S lyase"
                     /protein_id="HAY4622153.1"
                     /translation="MDIFNTSISRKGTYCTQWDFCEDRFGVKDVLPFSISDMDLPIQE
                     AIIRTLKKRLEHPILGYSRWQHDDYLNSIVNWYHQQYKTEIQPEWITYSPSVMYSISK
                     AIEILTLNGDNILIFTPVYNAFFDVIKHNGRNMLTTSLMKENGRGYVINWQDFELKIK
                     SAKMVLLCNPHNPTGTVWSEDDLHRIAACCARHNIWLCSDEIHSDFVFNHSFTSALTI
                     KDDKVVVFNSISKTFNVPALTGSYMISTDDNFNHKFRTISRYRDFVNSPSVLNVIATI
                     VAYNECEEWLKSLKVHIASNIQFTLQYLNENIPELIVWPAEGCYFSWVDCSALGYPFD
                     KFYRRLINEGRVGIMAGHVYGTEGEGYLRLNLACSREKLYMGLARLASVIKNINQEKE
                     NEQYGSYPSY"
     gene            19577..>20027
                     /locus_tag="JQ356_002059"
     CDS             19577..>20027
                     /locus_tag="JQ356_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003843858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HAY4622154.1"
                     /translation="MNNTDLIHLIKRFMRNEHKAVEEVIDSPLSEVANLIKILQSCQG
                     KVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGE
                     TAEILATLPSLKKMGNYLISFIRSHHSSLAISCDLSVEIPVKSEADNL"
BASE COUNT         4962 a         4664 c         5349 g         5052 t
ORIGIN      
        1 atcattgtgc agtgggatgc gaacagtaac ggtatctggg atcgcgaacc ggtaaaagag
       61 tccgaccaga ttggatttcg tctgaaggag catgtgctgg aaacgctacg cggtgcgaca
      121 tcctgtgaag gtaagggctg ggataaagtc actaatccgg atgccatcat tatcgacact
      181 tttcaggtcg tacgtcagga tgtcagcggc ttctcgccgg tgttgacggt taatatgcgt
      241 gctgccagta agtctgaacc gcaaaccgtg gtgaatgcca gctatagcgt gacaggattc
      301 aacctgtgaa ccgcgaaaag ggtgtttcgt cactggctct ggtcctgatg ctgctggttt
      361 tgggtagttt gctattacaa ggaatgagcc aacaggatcg cagttttgcc tctcgcgtga
      421 gcatggaaag tcagtcattg cgccgccagg ccatcgttca gtcggcgctg gcgtggggaa
      481 aaatgcactc ctggcagacg cagccagcag ttcagtgctc gcagtacgct gaaaccgatg
      541 cccaggtttg tttgcgttta ctggcagata atgaagcctt attgattgcc ggttatgaag
      601 gcgtttcgtt gtggcgaaca ggcgaagtca ttgatggaaa cattgttttt tcgccaagcg
      661 gctggagcga tttttgtccg ctgaaagaga gggcgttatg tcagcttccc tgaagaatca
      721 acaaggcttt agcctgccgg aggtaatgtt ggcgatggtg ttgatggtga tgattgtcac
      781 tgcgttatcg ggtttccagc gaacattgat gaacagtctt gccagcagaa accagtacca
      841 acagctctgg cggcatggct ggcagcaaac gcaactgcgc gcgatttcgc caccagctaa
      901 ctggcaggtc aaccgattgc agacatcgca ggcgggatgt gtcagcatca gcgttacgct
      961 agtttcaccc gggggcagag aaggcgagat gacccgcctg cattgcccga atcgtcagta
     1021 gtcaggagcc gctatgttaa gggtctacca ttccaatcgt ctggacgtgc tggaagcgtt
     1081 gatggagttt attgtcgaac gcgaacggct ggacgatcct ttcgaaccag agatgattct
     1141 ggtgcaaagt accggtatgg cacagtggct gcaaatgacc ctgtcgcaaa agtttggtat
     1201 tgcggcaaac attgattttc cgctgcctgc gagctttatc tgggatatgt tcgtccgggt
     1261 gttaccggag atccccaaag agagcgcctt taacaaacag agcatgagct ggaaactgat
     1321 gactctgctg ccgcaactgt tggagcacga agactttacc ctgttgcggc attatctgac
     1381 tgacgatagc gacaagcgaa aactgttcca gctttcctca aaagcggcgg acctgtttga
     1441 ccagtatctg gtctatcgcc cggagtggct ggcacaatgg gaaacaggac atttggttga
     1501 agggctggga gaagcacagg cctggcaagc gccgttgtgg aaggcgctgg tggaatatac
     1561 ccatgaactc ggacaaccgc gctggcaccg cgcgaatctc tatcagcgct ttatcgaaac
     1621 gctggagtcc gcgacgacct gcccgccggg gttaccttcg cgcgtcttta tatgcggtat
     1681 ttccgcgtta ccgcctgttt atctccaggc gctccaggcg ctgggtaaac atattgaaat
     1741 ccatctcctg tttaccaacc cctgccgtta ttactggggc gatattaaag atcctgctta
     1801 tctggcgaaa ctgctgactc gtcagcgtcg acacagtttt gaagatcgcg aattgccgct
     1861 atttcgcgat agcgaaaatg ccggacagct ctttaacagc gatggtgaac aggatgtcgg
     1921 caacccgctg ctggcctcat gggggaagct tgggcgcgac tacatttatc tcctttctga
     1981 cctggagagc agccaggagc tggacgcctt tgtcgatgtc acgccagata acctgctgca
     2041 taacattcag tctgacattc tggaactgga aaaccgtgcc gttgctggtg tgaacatcga
     2101 agagttttcc cgtagcgata acaaacgccc gcttgatcca ctggatagca gtatcacctt
     2161 ccacgtttgc catagcccgc agcgtgaagt tgaagttttg cacgatcgcc tgctggcgat
     2221 gctggaagaa gacccgacac ttactccgcg cgacatcatc gtgatggtgg ctgatatcga
     2281 cagctacagt ccgtttattc aggctgtgtt tggtagcgca cctgcggatc gttacctgcc
     2341 ttacgccatt tccgaccgtc gggcgcggca gtcgcatccg gtactggaag cgtttatcag
     2401 cctgttatcg ttgccagaca gccgctttgt gtcggaagac gtgctggcat tactggatgt
     2461 gccggtgctg gcggcgcggt ttgacatcac cgaagaaggg ctgcgttatt tacgcctgtg
     2521 ggtcaacgaa tccggcattc gttgggggat agatgacgac aacgttcgcg agctggaact
     2581 ccccgccacc ggacaacaca cctggcgatt tggcctgacg cgtatgttgc tgggctacgc
     2641 gatggagagc gcgcagggcg agtggcaatc ggttctacct tatgatgagt cgagcggctt
     2701 aattgcagaa ctggtggggc atctggcttc actgctaatg cagctaaaca tctggcgtcg
     2761 cgggctggca caggagcgtc cgctagaaga gtggttgccg gtttgtcgcg atatgctcaa
     2821 cgccttcttc ctgccggatg cggaaaccga agcggcgatg acgctgatcg aacaacaatg
     2881 gcaggcgatt atcgccgaag gtttaggggc gcagtatggc gacgcggtgc cgctgtcact
     2941 attgcgtgat gaactggcac agcgtctgga tcaagaacgt atcagccagc gttttctcgc
     3001 cggaccggtt aacatttgta ctctgatgcc aatgcgttca attccgttca aagtggtttg
     3061 cctgctggga atgaacgacg gcgtttatcc acgtcagctt gcgccattgg gctttgacct
     3121 gatgagccag aaaccgaagc gtggcgaccg tagccgtcgc gatgacgacc gctacctgtt
     3181 cctggaagcg ttaatttccg cgcagcaaaa actctatatc agttatatcg ggctttccat
     3241 tcaggataac agtgaacgtt tcccgtcggt actggtgcag gaactgatcg actacatcgg
     3301 gcaaagtcat tatctaccgg gcgatgaagc gctcaactgt gatgaaagcg aggcaagggt
     3361 aaaagcgcat cttacctgcc tccatacccg gatgccgttt gatccacaaa actaccagcc
     3421 aggcgaacga caaagctatg ctcgtgaatg gctacctgcg gccagccagg ctggtaaagc
     3481 acattctgaa tttgttcagc cgctgccgtt taccttaccg gaaaccgtgc cgctggaaac
     3541 gctacaacga ttctgggcac atccggtgcg ggcatttttc cagatgcgtt tgcaggtgaa
     3601 cttccgtacc gaagacagcg aaatccccga caccgagcca tttattctgg aagggcttag
     3661 ccgttatcaa atcaatcagc agttattgaa tgcactggtt gagcaggatg atgccgaacg
     3721 cttgttccgt cgcttccggg cggcagggga tttaccgtat ggcgcttttg gtgaaatttt
     3781 ctgggaaact cagtgccagg agatgcagca gcttgccgac agagtcattg cctgtcgcca
     3841 gccggggcag agtatggaaa ttgatctcgc ctgcaacggt gtgcagataa ctggctggtt
     3901 gccgcaggtg cagccggatg gcctgttgcg ctggcgtccc tctttattaa gtgtggcgca
     3961 gggaatgcaa ctttggctgg aacaccttgt ctactgtgcc agcggtggta atggtgaaag
     4021 tcgccttttt ctacgcaaag acggcgagtg gcgttttccg ccgcttgcag ccgaacaggc
     4081 tttgcattac ctctcacaac tgattgaggg gtatcgtgaa gggatgtccg cgccattgct
     4141 ggtgttacct gaaagtggcg gcgcgtggct aaaaacctgt tatgacgcgc aaaacgatgc
     4201 catgctggat gacgattcca cgttgcaaaa agcccgtacg aaattccttc aggcttacga
     4261 aggcaacatg atggtgcgtg gcgaaggtga taatatctgg tatcaaaggc tctggcggca
     4321 attaacacca gagacaatgg aggccatcgt tgaacagtcg caacgtttcc tgttaccgct
     4381 gtttcgcttt aatcagtcat gagtgctgta taaaaattgc gcaatctatc cgcttacttt
     4441 atgatgcgca ccagtcacgg actgatggtt atataaacat aggctgactc gtgcagcaca
     4501 agattaaatt ctggcagatg atttgcgtta acgtgttgaa tctggacaga aaattaagtt
     4561 gattatgagg tccgtgaatg ccccgcagca cttggttcaa agcattattg ttgttagttg
     4621 ccctttgggc acccttaagt caggcagaaa cgggatggca gccgattcag gaaaccatcc
     4681 gtaaaagtga taaagataac cgccagtatc aggctatacg tctggataac ggtatggtgg
     4741 tcttgctggt ttctgatccg caggcagtta aatcgctctc ggcgctggtg gtgcccgttg
     4801 ggtcgctgga agatcccgag gcgtaccagg ggctggcaca ttaccttgaa catatgagtc
     4861 tgatggggtc gaaaaagtac ccgcaggctg acagtctggc cgaatatctc aaaatgcacg
     4921 gcggtagtca caatgccagc actgcgccgt atcgcacggc tttctatctg gaagttgaga
     4981 acgacgcctt gcctggtgcg gtagaccgcc tggccgatgc tattgctgaa cctttgctcg
     5041 acaagaaata tgccgaacgt gagcgtaatg cggtgaacgc tgaattaacc atggcgcgta
     5101 cgcgtgacgg gatgcgcatg gcacaggtca gcgcagaaac cattaacccg gcacaccccg
     5161 gttcaaagtt ttctggtggt aacctcgaaa ctttaagcga taaacctggt aatccggtgc
     5221 agcaggcgct gaaagatttc cacgagaagt actattccgc caatctgatg aaggcggtta
     5281 tttacagcaa taaaccgctg ccggagttgg caaaaatggc ggcggacacc tttggtcgcg
     5341 tgccgaacaa agagagcaaa aaaccggaaa tcaccgtgcc ggtagtcacc gacgcgcaaa
     5401 agggcattat cattcattac gtcccggcac tgccgcgtaa agttctgcgc gttgagtttc
     5461 gcatcgataa caactcagcg aagttccgta gtaaaacgga tgaattgatt acctatctga
     5521 ttggtaatcg cagcccaggt acactttccg actggctgca aaagcaggga ttagttgagg
     5581 gcattagcgc caactccgat cctatcgtca acggcaacag cggcgtatta gcgatctctg
     5641 cgtctttaac cgataaaggc ctggctaatc gcgatcaggt tgtggcggca atttttagct
     5701 atctcaatct gttacgtgaa aaaggcattg ataaacaata cttcgatgaa ctggcgaatg
     5761 tgctggatat cgacttccgt tatccgtcga tcacccgtga tatggattac gtcgaatggc
     5821 tggcagatac catgattcgc gttccggttg agcatacgct ggatgcagtc aatattgccg
     5881 atcggtacga tgctaaagca gtaaaagaac gtctggcgat gatgacgccg cagaatgcgc
     5941 gtatctggta tatcagcccg aaagagccgc acaataaaac ggcttatttt gtcgatgcgc
     6001 cgtatcaggt cgataaaatc agcgaacaaa ctttcgctga ctggcagcaa aaagctgcca
     6061 atattgcgct ctccttaccg gagcttaacc cctatattcc tgacgatttc tcgctgatta
     6121 agtcagagaa gaaatatgac catccagagc tgattgttga tgagtcgaat ctgcgcgtgg
     6181 tgtatgcgcc aagccgttat ttttccagcg aacccaaagc tgatgtcagc ctgattttgc
     6241 gtaatccgaa agccatggac agcgcccgca atcaggtgat gtttgcgctc aatgattatc
     6301 tcgcagggct ggcgcttgat cagttaagca accaggcgtc ggttggtggc ataagttttt
     6361 ccaccaacgc taacaacggc cttatggtta atgctaatgg ttacacccag cgtctgccgc
     6421 agctgttcca ggcattgctc gaggggtact ttagctatac cgctacggaa gatcagcttg
     6481 agcaggcgaa gtcttggtat aaccagatga tggattccgc agaaaagggt aaagcgtttg
     6541 agcaggcgat tatgcccgcg cagatgctct cgcaagtgcc gtacttctcg cgagatgaac
     6601 ggcgtaaaat tttgccctcc attacgttga aagaggtgct ggcctatcgc gacgccttaa
     6661 aatcaggggc tcgaccagag tttatggtta tcggcaacat gaccgaggcc caggcaacaa
     6721 cgcaggcacg cgatgtgcaa aaacagttgg gcgctgatgg ttcagagtgg tgtcgaaaca
     6781 aagatgtagt ggtcgataaa aaacaatccg tcatctttga aaaagccggt aacagcaccg
     6841 actccgcact ggcagcggta tttgtaccga ctggctacga tgaatacacc agctcagcct
     6901 atagctctct gttggggcag atcgtacagc cgtggttcta caatcagttg cgtaccgaag
     6961 aacaattggg ctatgccgtg tttgcgtttc caatgagcgt ggggcgtcag tggggcatgg
     7021 gcttcctttt gcaaagcaat gataaacagc cttcattctt gtgggagcgt tacaaggcgt
     7081 ttttcccaac cacagaggca aaattgcgag cgatgaagcc agatgagttt gcgcaaatcc
     7141 agcaggcggt aattacccag atgctgcagg caccgcaaac gctcggcgaa gaagcatcga
     7201 agttaagtaa agatttcgat cgcggcaata tgcgcttcga ttcgcgtgat aaaatcgtgg
     7261 cccagataaa actgctgacg ccgcaaaaac ttgctgattt cttccatcag gcggtggtcg
     7321 agccgcaagg catggctatt ctgtcgcaga tttccggcag ccagaacggg aaagccgaat
     7381 atgtacaccc tgaaggctgg aaagtgtggg agaacgtcag cgcgttgcag caaacaatgc
     7441 ccctgatgag tgaaaagaat gagtgatgtc gccgagacac tagatccttt gcgcttgccc
     7501 ttacagggtg agcgcctgat tgaagcctct gccggcacag gcaaaacctt tacgattgcg
     7561 gcgctctatt tgcgcctgtt acttggacta ggcggttccg ccgcctttcc ccgcccgctg
     7621 accgttgaag aactgctggt ggtcaccttt accgaggctg ccacggcaga attgcgtggt
     7681 cgtatccgta gcaatatcca tgagttgcgc atcgcctgtc tgcgtgaaac taccgacaat
     7741 ccactgtacg aacgtctgct ggaagagatc gacgataaag cgcaagccgc gcagtggttg
     7801 ttgttagccg aacggcagat ggatgaagcg gcagtcttta ctattcacgg tttttgccag
     7861 cgcatgctca acctgaatgc ctttgaatcc ggcatgctgt ttgagcagca gctgattgaa
     7921 gatgagtctc tgctacgtta ccaggcctgc gccgatttct ggcgtcgcca ctgctacccg
     7981 ctgccgcgtg aaatagccca ggtcgtcttt gaaacctgga aagggccgca ggcgttgctg
     8041 cgcgatatta atcgttatct gcaaggcgaa gcgccggtta tcaaagcacc gccgcccgat
     8101 gatgaaacgc tggcttcccg ccacgcgcaa attgtggcgc gtattgctac ggtaaaacag
     8161 cagtggcgcg acgcagtggg tgaactggat gcgctgatcg aatcttctgg tattgatcga
     8221 cgcaagttta accgtagcaa tcaggctaaa tggatcgaca agatcagcgc ctgggcagaa
     8281 gaagagacca acagttatca gttgccggag tcgctggaaa aattctccca gcgtttctta
     8341 gaagatcgca cgaaagctgg gggggaaacc ccgcgacatc cactgtttga ggcgatcgat
     8401 caactgcttg cagaaccatt gtcgatccgc gatctggtga tcacccgcgc attggctgag
     8461 atccgcgaaa cagtagcgcg tgaaaaacgc cgccgtggcg aattgggttt tgatgacatg
     8521 ttaagtcggc tcgattccgc gctgcgtagc gaaagcggtg aggtgttggc agcggcgatc
     8581 cgtacgcgat tcccggtggc aatgatcgat gaatttcagg ataccgaccc ccagcagtac
     8641 cgaatttttc gccgtatctg gcaccatcag ccggaaaccg cattgttgct gattggcgac
     8701 ccgaagcagg ccatatatgc attccggggt gcggatatct tcacttatat gaaggcgcgt
     8761 agtgaagttc acgcccacta cactttagac accaactggc gctccgcacc tggaatggtg
     8821 aacagtgtga acaagctttt cagccagact gatgacgcgt tcatgtttcg cgaaataccg
     8881 tttattccag tgaaatcagc cgggaaaaat caggcgttac gttttgtatt taaaggtgaa
     8941 acgcagcctg cgatgaaaat gtggctgatg gaaggcgaaa gctgcggcgt tggcgactat
     9001 caaagtacca tggcgcaggt atgtgctgcg caaatccgcg actggctaca agccggacag
     9061 cggggcgaag cgttgctgat gaacggcgac gacgcgcgtc cggtgcgtgc ttcggacatc
     9121 agtgtgctgg tgcgcagccg ccaggaggcc gcccaggtgc gcgatgcctt aacgttgctg
     9181 gaaatccctt ccgtttacct ttcgaaccgc gacagtgttt ttgaaactct ggaagcgcag
     9241 gaaatgcttt ggttattgca ggcggtgatg acgcccgaac gtgagaacac cctgcgtagt
     9301 gcgctggcaa cgtcaatgat ggggctgaac gcgctggata tcgaaacgct gaataatgac
     9361 gaacatgcgt gggatgcggt agttgaagag ttcgatggtt atcggcaaat ctggcgcaaa
     9421 cgtggcgtta tgccgatgct gcgggcgctg atgtcggcgc gtaacattgc agaaaacttg
     9481 ctggcaacgg caggcggtga gcggcgtctt accgatatct tgcatatcag cgaactgcta
     9541 caagaagccg gaacgcagct ggaaagtgaa catgcgctgg tacgctggtt atcgcaacat
     9601 atcctcgagc cagacagtaa tgcctccagc caacaaatgc gcctcgaaag tgataaacat
     9661 ctggtgcaga ttgtcacgat ccataaatcg aaagggctgg aatatccgct ggtctggttg
     9721 ccatttatta ccaatttccg cgtccaggat caggcgtttt atcacgatcg ccactcgttt
     9781 gaggcagttt tggatcttaa tgctgcgcca aaaagcgtcg acctcgcgga ggtcgaacgt
     9841 ctggcggaag atctgcgttt gctttacgtg gcgctgacgc gttcggtttg gcattgcagt
     9901 ctcggcgttg caccgctggt gcgccgtcgt ggcgataaaa aaggtgacac cgacgtccac
     9961 caaagtgcgc tcgggcgttt gctgcaaaaa ggggaaccgc aagatgcggc agggcttcgc
    10021 acctgtattg aagcgttatg cgatgatgat attgcctggc aaacggcaca aactggtgat
    10081 aaccagccct ggcaggttaa tgatgcttta actgcagaac tgaatgcgag gacactacaa
    10141 cgattgcccg gcgataactg gcgtgtcacc agctactccg gcttgcagca gcgtggtcac
    10201 ggtatcgctc aggatctgat gccacggctg gatgttgatg ccgcaggcgt ggtcagcgtc
    10261 gttgaagaac cgacgttaac accgcatcag ttcccgcgcg gtgcgtcacc ggggacattc
    10321 ttgcacagtt tgtttgaaga cctcgatttt acccagccgg ttgacccgaa ctgggtacag
    10381 gaaaaactgg aactcggcgg ctttgaatcg cagtgggaac cggtgttgac cgagtggatc
    10441 acggctgtcc tccaggcacc tctcaatgaa aagggggtta gcctgagtca gctttccgac
    10501 cgcgataaac aggtggagat ggagttttac ctgccgatta gcgaaccgct catcgctagc
    10561 cagcttgatg cactaattcg ccagtttgat ccgctatccg ctggctgccc gccgctggag
    10621 ttcatgcagg tacgcggcat gttaaaaggc tttatcgacc tagtattccg ccacgaaggg
    10681 cgttattacc tgctcgacta taaatccaac tggctgggtg aagacagttc ggcttacacc
    10741 caacaggcta tggcagcagc gatgcaggca caccgctatg atctgcaata tcagctttat
    10801 accctggcgc tgcatcgtta tctgcgccat cgcattgctg attacgacta tgatcgtcac
    10861 tttggcggcg ttatctatct gttcctgcgt ggcgttgata aagaacatcc gcaacaaggg
    10921 atttacacaa cccgacccaa cgccgggttg attgccctga tggatgagat gtttgccggt
    10981 atgaccctgg aggaggcgta atgaaattgc aaaagcaatt actggaagct gtggagcaca
    11041 aacagctacg cccgctggat gtgcaatttg ccctgaccgt ggcgggagat gaacatcctg
    11101 ccgtcaccct cgcggcggca ctgttaagtc atgatgccgg agagggacac gtctgtttgc
    11161 cgctttcacg actggaaaat aacgaggcgt cgcatccgct gttggcgacc tgtgtcagtg
    11221 aaatcggtga gctacaaaat tgggaagaat gcttgctggc ttctcaagcg gtcagcaggg
    11281 gagatgaacc cacgccgatg atcctctgtg gcgatcgtct ttatttgaat cgcatgtggt
    11341 gtaacgagcg gacggtagcg cgcttcttca atgaggtgaa tcatgccatt gaggttgatg
    11401 aagctctact ggcgcaaacc ctggacaaac tttttccagt aagcgatgaa attaactggc
    11461 aaaaagttgc agcggcagtg gcgctgacgc ggcggatctc ggtgatttcc ggcggcccag
    11521 gcaccggtaa aacgaccacc gtggcgaagt tgctggcagc gttaattcaa atggccgacg
    11581 gcgaacgctg ccgtatccgt ctggctgcac caacgggtaa agctgccgcg cgcttaaccg
    11641 aatctctcgg caaggctttg cgacagttac cgctgaccga tgaacaaaag aaacgcattc
    11701 cggaagatgc cagcactttg caccgattgc tgggcgcgca gccgggtagc cagcgtttac
    11761 gtcatcatgc cggtaacccg ctgcatcttg atgtgctggt ggtagatgaa gcgtcaatga
    11821 tcgatctgcc tatgatgtcg agactgatcg acgccttgcc cgatcatgcg cgagtgatct
    11881 ttctcggcga tcgtgatcaa ctggcctcgg ttgaggctgg ggctgtgctg ggcgatatct
    11941 gcgcttatgc caacgcgggc tttaccgccg agcgtgccag gcagctaagc cgcctgacgg
    12001 ggactcacgt tccggcagga accggcacag aagcggcatc tttgcgcgac agtctctgcc
    12061 tgctgcaaaa aagctatcgt ttcggcagcg attctggcat tggtcagtta gctgcggcga
    12121 tcaaccgtgg tgataaaacg gcagtgaaaa ccgtttttca gcaggatttt actgatatcg
    12181 aaaaacgact tttacagagc ggcgaagatt atattgcgat gcttgaggaa gctcttgcgg
    12241 gttatggacg ttatctggat ctgctgcaag cgcgtgccga gccggattta atcattcagg
    12301 cgttcaatga gtaccaactt ttgtgcgccc tgcgggaagg gccgtttggc gtggctggac
    12361 tgaatgagcg aattgagcag tttatgcaac agaagcgcaa aattcatcgt catccgcact
    12421 ctcgttggta cgaaggtcga ccggtgatga ttgcccgtaa tgacagcgcg cttgggttgt
    12481 ttaatggcga tatcggtatt gcgctggatc gcgggcaggg gacgcgcgtc tggtttgcga
    12541 tgccggacgg caatattaag tctgtgcaac cgagtcgctt gccagagcac gaaactacgt
    12601 gggcgatgac ggtacataaa tcgcagggat cggagttcga ccatgcggcg ttgattttac
    12661 cgagccaacg cacgccggta gtaacgcgag agctggtata caccgcggtg acccgcgcgc
    12721 gtcgccgtct gtcgctgtat gccgatgagc gtatattaag tgcggcaatc gccactcgta
    12781 ctgagcggcg cagtggtctg gcggcgttgt ttagttcgcg ggaataaacg taattgccgg
    12841 atgcgacgca cgagtgttac gcatgtcgca tccgacaatt ttcatcgctt accctaaatc
    12901 cgccatcaac actttggatt tacgctggta gttgtacaac tgctttttgc tctcgggcag
    12961 taaatcaata tccaccgggg taaatccacg ttcctggaac cagtgaatac tgcgcgtggt
    13021 cagcacaaac aatttgctta agccgctctg cttcgcctga gcggcaatgc gttccagcag
    13081 aacctcgccc cgtgatgaac tgcggtaatc cgggtgaact gccacacagg ccatttcccc
    13141 aatcttctct tccgggaacg gatagagcgc ggcgcaggca atagtcgtgt tatcgcgctg
    13201 aataatggtg aatttgtcga tttccatctc cagctgctcg cgagaacggc gcaccagaat
    13261 accttgctgc tccagcgggc gaatcaactc cagaataccg ccaatatcgt tgattgttgc
    13321 gcgacgaatc tgctcggcgc tttccatcac aatctgcgta ccgataccgt cgcgtgagaa
    13381 caactcttgc aacagcgcgc catcttcctg ataactgatt aaatgacagc gacgcacgcc
    13441 gctgcggcag gctttcactg cgccacgcaa aaagcgcacc gtaccggagt tgtaatcgcc
    13501 tttctcttcc tgggcttcta cccgcgcttg cgcttcgtta gggaaaagtt ctgagacaat
    13561 atcaccgtcg tcattagtga cgccctgtga agagcaaaaa ccaatcatct tctcagcttt
    13621 cagtttgatg gccagttgag tggcaatctc ttccgaggtc agattaaagc tctcgccagt
    13681 gactgaaaca gcgaccggcc ccattagcac tattgcaccg ctgtccagtt gacgatggat
    13741 cgcgtcttca tcaatccgcc ggatacgccc gctatggcag taatccacgc cgtcatcgac
    13801 gcccagcggc tgggcaataa taaaattgcc actgacgacg ttgatatgcg cgccctgtag
    13861 cggcgtgtta ttgagactca tcgacaggcg agcagtgatg tccagttgca atgttcccgc
    13921 agcctgcttc accagttcca gtgttttggc gtcggtcaca cgtatattct tgtgatacag
    13981 cggttcgtgg tgatgcgcgg ccagatttgc gtcgatctgc ggacgtgcgc catagaccac
    14041 caccagacgg atgccgaggc tgtgcaacaa cccgatatca ttaacgatac tggagaaatt
    14101 ctcatgctca atggcttcac cgccgagcat gatgacaaac gtttttcccc ggtgggtatt
    14161 gatataggga accgaatggc ggaatccctc gaccagctcg gttttacgtt cctttaccac
    14221 ggcacacccc tttgcatgat tattctaaat tagtgtattt ttattctgtt ttttcgcagg
    14281 gtgcaagtgt aaattttatg cgagagcgac ttttttatca gtaatgccgt gaatataaaa
    14341 agaatgttta ccgtttatta gatgacagat tatgcgtctt tcgctaaagt ttccggtcaa
    14401 attagtcgtt tacttgttac acagcttaga tttcttttgc tcgggagagg catgtcagga
    14461 tccaacactg caatcagccg tcgtcgttta ctgcaaggcg cgggtgccat gtggctattg
    14521 agcgtaagtc aggtcagtct ggctgcggtc agccaggtcg tggcggtgcg cgtctggcct
    14581 gcgtccagct acacccgtgt gacggtagaa tcaaatcgtc agctgaaata taagcagttc
    14641 gcgttgagta accctgaacg cgtggtggtg gatatcgaag atgtaaacct gaactcggta
    14701 ctcaagggga tggcggcaca aattcgtgca gacgacccgt tcatcaagtc ggcgcgcgtc
    14761 gggcaatttg acccgcagac cgtacggatg gtttttgaat taaagcaaaa cgtaaaaccg
    14821 cagctgtttg cccttgcgcc ggtcgccggg tttaaagagc gtctggtgat ggacctctat
    14881 ccggccaatg cacaggatat gcaggacccg ctgctggcgc tgctggagga ttacaacaaa
    14941 ggcgacctcg aaaagcaggt gccgccagca caaagtggtc cacaaccggg taaagcaggg
    15001 cgcgatcgtc ctattgttat tatgcttgac cctggccacg gcggcgaaga ctccggtgcg
    15061 gtggggaaat acaaaacgcg cgaaaaagac gtggtattgc aaatagctcg ccgtctgcgc
    15121 tctctgatcg agaaagaggg caatatgaag gtgtacatga cgcgcaatga agacatcttc
    15181 attccgttgc aagtgcgcgt agcaaaagcc cagaaacagc gtgctgacct gtttgtctct
    15241 atccatgccg acgcctttac cagtcgtcag ccgagcggtt cctctgtgtt tgcgctctca
    15301 accaaaggtg caaccagtac tgcggcaaaa tatctggcac aaacccagaa cgcctcggac
    15361 ttgattggtg gcgtgagcaa aagcggtgac cgctatgtcg accacaccat gttcgatatg
    15421 gtgcagtcgc tgaccattgc cgacagcctg aagtttggta aagcggtact gaataagctc
    15481 ggtaaaatca acaagctgca taaaaatcaa gttgaacagg ccgggtttgc cgtactaaag
    15541 gcaccagata ttccctccat tctggtcgaa acggcgttta ttagtaacgt tgaggaagag
    15601 cgtaaactga aaacggcgac tttccagcag gaagttgcgg agtctattct tgcggggatt
    15661 aaagcgtatt ttgccgatgg ggcgacgctg gcgagaaggg gatgatgttt ttaatttatt
    15721 caatgaattt atgtttcatt gaataaatat tatttacata aatgttgaac gatggttttg
    15781 tgactgctgt cgaatatttg aatatcggct taaaaaataa gtctgtcatc tcttttatta
    15841 agcacaattc cgtgtaaggt atacgcatta gttaattatc ttgcaactgt taaatcaggc
    15901 aaggcaatgt ttgaagtaat tattacttct gacatgcctt gccttttttt tggggagcca
    15961 tggaatgatc atcgaaaaag tcatgaacaa taattgtgta caggcatcgg tgaacggaca
    16021 ggaggttatc atttctgggc ctggcgttgg ttacaataaa aatatggtat gtcggtccct
    16081 gagcatcctg caaaccggat tttttatgtc agaaatgagc aaaaaaataa actctacaaa
    16141 ttgattgagc atgtgggtat tgagtatatt tttgttgccg aaaagatagt gcattatgcg
    16201 gagagtaatc tcgaaaaaaa actcaatcca tcgctactac tgattcttgc tgatcacatt
    16261 tcgaatgcaa tatcccgagt cgtctcaggc atacaaatta ataatgtttt ccttgaggaa
    16321 atcaaagcgt tgtacaaagc agagtatgca ataagtcgtg atgcattaac aatcattaat
    16381 gagcaattta gcgttcaact accggatgat gagattggtt ttatagcatt gcatatttta
    16441 aataattatg aaaattcagt tgattatgaa tcagtaagga ttattgagct gtctcaaaaa
    16501 atcacggagc ttattgaagt tgtttataac agaagggtgg acagaagttc atttaactac
    16561 tccagattta tgatgcacct taaatatttt tctagtcgtg tgttatgtaa tgaaaaaata
    16621 aaacagaaaa atattggtga tatctatgag cagtttcttg aaaaagattt tcagttacaa
    16681 cgtgccattc atgaaattga aagatatctg tacgcaactt ttaaatatga tttgattctg
    16741 gaagagaaac tatatctttc tattcgcatc aaagtattaa tggactaatt atacataaca
    16801 ttttcatgag ataaccagta tgaaacaaaa gaaatcctgg agtttttttc agagcctggg
    16861 gaaggcattt atgtatccca tcgctctgtt aagtgtatgt ggtatgatgt tagggctggg
    16921 aagtggttta gccagcgatg atatggcaaa attcattcca gtgttggcta ttccgttaat
    16981 taaaaccata cttgatttta ttgttagcct tggtttgttt gccttcgtta atttacctgt
    17041 attgtttgcg atagctatac ctttgggatt attaaaagag aaagatgata aagcctatgg
    17101 cgctttttct ggcttaattg gctttatggc gatgcatctt ggaacgaact tttatcttaa
    17161 acagcacgac ttattggtag ctgctgacca aatgtcgaca catgggcaaa ccatcatact
    17221 cgggatccag tcctacaata ccagcgtgtt gggtgggatt gtggcagggt tattagtcgc
    17281 cagcatgtat aaaaagatcg ttaacttacg tattcctgaa taattagggt tttatagtgg
    17341 cccacgcctt gtgcctatca ttacactgat tgtgatgagt ggatttggtc tgatcattcc
    17401 ttttatctgg ccgccatttt tcaatctttt catgctcatt ggtcactgga tttcaacttc
    17461 cggtcctgtt ggttatttct tctatgctgt tgccgaacgc gtgacgatac cttttggctt
    17521 aaatcacttg gtgacatcag ttttccgctt taccccaatc ggcggatcgg cagtgattgg
    17581 cggtgaagag tattacggca ccctgaacat gtttatggca tacgtcaaag agaatgcggt
    17641 cattccgctg gatttggcgg ggaaaatgga gcagggcaaa ctgatgattc agtatggtct
    17701 ggctggagcc gcgctggcga tgtatcgcac tgctcatgct caaaacagaa gggctatcaa
    17761 agcattgctg atttccggtg tgctcacggt aattattggc ggcgtcagcg agccgattga
    17821 atttctgttc ttatttgtca gcccgctgtt gtttgtcttc catgccttta tgaatggatt
    17881 ggctaacatg gttctgccat atatgggcgt gaagatgggc tttactggcg atctgattca
    17941 atttattagc tttggtgtct tacgtggcac aagaacggga tggccattag cggtatgtgt
    18001 tgaagtggct tatttcttca tttattactt tgtgttccgt tggaccattc tcaaatttaa
    18061 cctgatgact gtaggccgtg aagagtccag tcctgtcacg ctgaacgctc acgaagaaac
    18121 tgcaatagct aacatcccag ttcatgataa atcagagttg caggcagcgg agcaaatggt
    18181 taaggctctg ggtggtaaag aaaatattaa atcactggat aattgtgtaa ctcgtttgcg
    18241 tttaactatc gcggatatgg gattgataaa tgaggctgca ataaaaaggg ccggaggaat
    18301 tgcggttgtg aaacttgatc aaaatacctt acaagtcatt atcggtacaa aagtcatcgc
    18361 cctacgtcgg gatatggata attacatggg gatatgttga tggatatttt taatacctca
    18421 atttctcgta aaggaacata ttgcacacaa tgggactttt gtgaagacag atttggtgta
    18481 aaagatgtat taccattctc tatttcagat atggatcttc cgatacagga agctatcatc
    18541 agaacattaa aaaaacgtct ggaacacccg attttagggt acagtcgttg gcagcatgat
    18601 gactatctga attcgatagt caattggtat catcaacaat ataaaacaga gattcaacca
    18661 gaatggatca cctatagccc aagcgtgatg tattcaatat ctaaggcaat agaaatattg
    18721 acattgaatg gagataatat tctcattttc acgcctgttt ataacgcatt ttttgatgtg
    18781 attaagcata atggtcgaaa catgctaaca acctctttga tgaaagaaaa tgggagaggc
    18841 tacgttatca actggcaaga ctttgagctt aaaattaaaa gcgcgaagat ggtgttatta
    18901 tgtaatcctc ataacccgac aggaacggtc tggtcggaag acgatcttca cagaatcgca
    18961 gcatgctgtg caaggcataa tatttggtta tgttcagatg aaatacatag tgattttgtt
    19021 tttaatcata gtttcacgtc agcgctaaca ataaaagatg acaaagtggt ggtgtttaat
    19081 tcgatttcga aaacatttaa tgttcctgcg ctaaccggat catatatgat ttcaactgac
    19141 gataatttta atcataagtt cagaacgata tcgaggtatc gcgatttcgt aaactcccca
    19201 tcagtactga atgtaattgc gaccattgtt gcctataatg aatgtgaaga atggttaaag
    19261 tcattaaagg tacatattgc ctctaacatt caatttacct tgcagtattt aaatgaaaat
    19321 attccggaat tgatcgtatg gccagctgag ggctgctatt tttcgtgggt tgattgctcg
    19381 gcccttggtt atccctttga taaattttac cgtcgattaa ttaacgaagg gagagtaggt
    19441 attatggcgg ggcatgttta tggtactgaa ggagagggct atctgcgtct taatctggcc
    19501 tgcagtcgag aaaaattata tatggggctt gcgcgccttg cgagtgtaat taaaaatatt
    19561 aatcaggaaa aagaaaatga acaatacgga tcttatccat cttattaaac gttttatgcg
    19621 taacgaacat aaagcagtag aagaggttat tgattccccc ctttcggaag tcgcgaattt
    19681 aattaaaata ttacaatctt gccagggaaa agttgttttt attggtgttg ggaaatctgg
    19741 cattattgcc agaaaacttg ctgcaacatt tgccagcacc ggaactccct cgttttttgt
    19801 tcacggtacg gaagcggtac acggcgacct tgggatggtg gcgaaagacg atgttgttat
    19861 tcttatttca aacagtggtg agacggcgga aatcctggcg acactgccta gtttgaaaaa
    19921 aatgggtaat tatttgatct cttttatccg cagtcatcac tcatcgcttg cgataagttg
    19981 tgatttatct gttgaaatcc ccgtcaaaag tgaggcggat aatttag
//
LOCUS       DADKRT010000069        19875 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.070, whole genome shotgun sequence.
ACCESSION   DADKRT010000069 DADKRT010000000
VERSION     DADKRT010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19875
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.070"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            54..830
                     /locus_tag="JQ356_002060"
     CDS             54..830
                     /locus_tag="JQ356_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HAY4622155.1"
                     /translation="MTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTG
                     RAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDM
                     GRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEELLPPLMAGLKQAGLKVG
                     TPFFVRYGRVKIEDQICEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEAD
                     RTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR"
     gene            840..1499
                     /gene="eutL"
                     /locus_tag="JQ356_002061"
     CDS             840..1499
                     /gene="eutL"
                     /locus_tag="JQ356_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HAY4622156.1"
                     /translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
                     DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
                     MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
                     GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
                     A"
     gene            1512..2012
                     /gene="eutK"
                     /locus_tag="JQ356_002062"
     CDS             1512..2012
                     /gene="eutK"
                     /locus_tag="JQ356_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutK"
                     /protein_id="HAY4622157.1"
                     /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
                     VVEGDLAAGRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPD
                     APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
                     YRLKPH"
     gene            2058..3110
                     /gene="eutR"
                     /locus_tag="JQ356_002063"
     CDS             2058..3110
                     /gene="eutR"
                     /locus_tag="JQ356_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HAY4622158.1"
                     /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA
                     LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD
                     RVLHMLRSQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG
                     AMLEDAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVKDAAMQWGFWHLGQFVTDYQQLF
                     AEKPSLTLHQRMREWG"
     gene            complement(3116..4015)
                     /gene="hemF"
                     /locus_tag="JQ356_002064"
     CDS             complement(3116..4015)
                     /gene="hemF"
                     /locus_tag="JQ356_002064"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HAY4622159.1"
                     /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG
                     RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
                     PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY
                     PRYKKWCNDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
                     RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DYQPKDGSPEAALSEFIKVRDWV"
     gene            complement(4019..4888)
                     /gene="amiA"
                     /locus_tag="JQ356_002065"
     CDS             complement(4019..4888)
                     /gene="amiA"
                     /locus_tag="JQ356_002065"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HAY4622160.1"
                     /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
                     HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
                     RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
                     HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
                     HWFDNQKAHSKKR"
     gene            5102..5527
                     /locus_tag="JQ356_002066"
     CDS             5102..5527
                     /locus_tag="JQ356_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase YpeA"
                     /protein_id="HAY4622161.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
                     FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQINVPEDNDMVLGMYERLGYEHADMLSLGKRLIEDEEY"
     gene            5514..5963
                     /locus_tag="JQ356_002067"
     CDS             5514..5963
                     /locus_tag="JQ356_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HAY4622162.1"
                     /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASR
                     EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVL
                     LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE"
     gene            6170..6745
                     /locus_tag="JQ356_002068"
     CDS             6170..6745
                     /locus_tag="JQ356_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HAY4622163.1"
                     /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
                     GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG
                     TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
                     QFRGEWRGPEGLMPSDDTLKNWKVSKIIWRR"
     gene            6841..7740
                     /gene="yfeX"
                     /locus_tag="JQ356_002069"
     CDS             6841..7740
                     /gene="yfeX"
                     /locus_tag="JQ356_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311329.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HAY4622164.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
                     EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LRFTKPVTGGYYFAPSLDKLMAL"
     gene            complement(7798..9102)
                     /gene="pbp4b"
                     /locus_tag="JQ356_002070"
                     /pseudo
     CDS             complement(7798..9102)
                     /gene="pbp4b"
                     /locus_tag="JQ356_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311328.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
     gene            complement(9107..10531)
                     /gene="murP"
                     /locus_tag="JQ356_002071"
     CDS             complement(9107..10531)
                     /gene="murP"
                     /locus_tag="JQ356_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylmuramic acid transporter subunit
                     IIBC"
                     /protein_id="HAY4622165.1"
                     /translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD
                     PNIKTLEGVKSVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQL
                     KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN
                     FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF
                     FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM
                     PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS
                     LFPILSMAGAGQVGAALALYWRSQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK
                     PFVTACLGGAAGGLFIGLIAWWGLPMGLNSALGPSGLVALPLMTSAQGILPAMAVYAG
                     GILVAWVCGFIFTTLFGCRNVNLD"
     gene            complement(10535..11431)
                     /gene="murQ"
                     /locus_tag="JQ356_002072"
     CDS             complement(10535..11431)
                     /gene="murQ"
                     /locus_tag="JQ356_002072"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HAY4622166.1"
                     /translation="MQLEKMITEGSNAASAEIDRVSTLEMCRIINDEDKTVPLAVERV
                     LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
                     EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
                     TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
                     VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
                     AAEAKKRLDQHGGFIRQVLDKE"
     gene            11595..12452
                     /gene="murR"
                     /locus_tag="JQ356_002073"
     CDS             11595..12452
                     /gene="murR"
                     /locus_tag="JQ356_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MurR"
                     /protein_id="HAY4622167.1"
                     /translation="MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQL
                     GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNTTALHLHSSITSDDSLEVIA
                     RKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI
                     GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCVEAARKQGATVIAITSL
                     ADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVASLKMIQR
                     SSELTQRLK"
     gene            12581..13372
                     /gene="ucpA"
                     /locus_tag="JQ356_002074"
     CDS             12581..13372
                     /gene="ucpA"
                     /locus_tag="JQ356_002074"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HAY4622168.1"
                     /translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
                     LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
                     DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPM
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
     gene            13676..14692
                     /locus_tag="JQ356_002075"
     CDS             13676..14692
                     /locus_tag="JQ356_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4622169.1"
                     /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKTDVVTYNQVTDVQILHDKGKL
                     IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA
                     QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
                     AGRN"
     gene            14692..15525
                     /gene="cysT"
                     /locus_tag="JQ356_002076"
     CDS             14692..15525
                     /gene="cysT"
                     /locus_tag="JQ356_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HAY4622170.1"
                     /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW
                     AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
                     H"
     gene            15525..16400
                     /gene="cysW"
                     /locus_tag="JQ356_002077"
     CDS             15525..16400
                     /gene="cysW"
                     /locus_tag="JQ356_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HAY4622171.1"
                     /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEEHHEH"
     gene            16390..17487
                     /gene="cysA"
                     /locus_tag="JQ356_002078"
     CDS             16390..17487
                     /gene="cysA"
                     /locus_tag="JQ356_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter ATP-binding
                     protein CysA"
                     /protein_id="HAY4622172.1"
                     /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
                     DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
                     DAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
                     PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE
                     RLFVGLQHARLYNGDERIETRDEELALAQSA"
     gene            17621..18532
                     /gene="cysM"
                     /locus_tag="JQ356_002079"
     CDS             17621..18532
                     /gene="cysM"
                     /locus_tag="JQ356_002079"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HAY4622173.1"
                     /translation="MSTLEQTIGNTPLVKLQRMGPNNGSEVWLKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
                     QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
                     GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(18535..18903)
                     /locus_tag="JQ356_002080"
     CDS             complement(18535..18903)
                     /locus_tag="JQ356_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HAY4622174.1"
                     /translation="MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIF
                     VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE
                     NAQPFLHALIAQTDKTVPAQ"
     gene            19008..19859
                     /gene="pdxK"
                     /locus_tag="JQ356_002081"
                     /gene_synonym="thiJ"
     CDS             19008..19859
                     /gene="pdxK"
                     /locus_tag="JQ356_002081"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HAY4622175.1"
                     /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
                     NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQ
                     IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
                     FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNV
                     ISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELI
                     LPPLAEA"
BASE COUNT         4570 a         5044 c         5611 g         4650 t
ORIGIN      
        1 cggcccccgc gctgtcagaa gcaaagtgca ccaccaccac ctgtgcggca ccggtgacct
       61 cggaaagctg cgcgctggat ttaggttctg cggaagcaaa agcgtggatt ggtgttgaaa
      121 acccgcatcg cgcagacgta ttaacagaac tgcgtcgcag caccgtggcc cgcgtttgta
      181 ccggtcgtgc cggtccgcgt ccgcgtaccc aggcgttgct gcgtttcctg gccgatcact
      241 ctcgttcgaa agataccgta ctgaaagaag tgccggaaga gtgggtgaaa gcgcagggct
      301 tgctggaagt acgctccgaa attagcgaca aaaatctcta cctgactcgc ccggatatgg
      361 gccgccgcct gtgtgcagaa gctgttgaag cgctgaaagc acagtgtgtt gctaatccgg
      421 acgtacaggt cgttatttct gatggcctgt caactgatgc catcaccgtg aactacgaag
      481 agctcctgcc gccgctgatg gcgggcctga aacaggccgg gctgaaagtc ggcacgccat
      541 tctttgttcg ttatggtcgc gtgaagattg aagatcagat ctgtgagatc ctcggcgcga
      601 aagtggtgat cctgctggtg ggggaacgtc cggggttggg tcagtcagaa agcctctcct
      661 gttacgccgt ttactcgccg cgtatggcga ccaccgttga ggccgatcgc acctgcatct
      721 ctaacattca ccagggcggc acgccgccgg ttgaagccgc agccgtcatt gtggatttgg
      781 cgaaacgtat gctggagcag aaagcatccg gcatcaacat gacccgataa ggaggcatca
      841 tgccagcttt agatttgatt cgaccgtcgg taaccgccat gcgggtgatt gcctccgtta
      901 acgctgaatt tgcgcgtgaa ctaaaattgc cgccgcatat tcgtagcctc gggctgattt
      961 ctgctgattc cgatgacgtc acctacattg cggctgacga agcgaccaag caggcgatgg
     1021 tcgaagtggt atatggccgc tcgctgtatg cgggagcagc acacggaccg tcaccgactg
     1081 ccggtgaagt gctgattatg cttggtgggc caaacccggc ggaagtgcgt gctggtctgg
     1141 atgcgatggt tgcgcatatt gaaaatggcg ctgctttcca gtgggctaat gacgcagaaa
     1201 acaccgcatt cctggcacat gtagtttcgc gtaccggttc ttatctctca tcaaccgccg
     1261 ggatcacgct tggcgatccg atggcgtatc tggtggcacc gccgctggaa gcgacctacg
     1321 gcattgatgc agcgttgaaa tctgccgacg tacagctggt gacctatgtc ccgccaccgt
     1381 ctgaaaccaa ctactcggca gcatttttaa ccggtagcca ggccgcgtgt aaagcagcct
     1441 gtaacgcctt taccgatgca gtgctggaaa tcgcgcgtaa tccaatccag cgtgcgtaac
     1501 ggaggttgcc gatgatcaat gcactgggat tgctggaagt ggacggcatg gtcgccgcga
     1561 tagatgcagc ggatgccatg ctcaaagcag ctaacgttcg tctgctcagt cacgaagtgc
     1621 ttgaccctgg tcgcttaacg ctggtggtgg aaggcgatct ggcggcgggt cgtgcggcgc
     1681 tggacgcagg ttgtgctgcc gcgatgcgta ccgggcgtgt catcagccgc aaggagatcg
     1741 gtcggccaga cgatgacacc cagtggctgg ttactggctt taaccgccag ccgaagcaac
     1801 ccgtaaggga acccgacgcg ccagttatcg tcgcggaatc tgctgacgag ttgttggcgc
     1861 tgttaacatc agtacgtcag ggaatgacgg caggagaagt ggctgcccac tttggctggc
     1921 cgctggaaaa agccagaaat gcgctcgaac agctcttttc tgccgggacg ttacgtaaac
     1981 gcagtagtcg ttatcgtctc aagccccatt aacctgtcgg aggtgctggg tgtcctacaa
     2041 cacccggcat taacatcatg aaaaagaccc gtacagccaa tttgcaccat ctttatcatg
     2101 aacccttacc cgaaaacctg aagctcacgc cgaaggtcga agtggataat gttcatcaac
     2161 gacagacaac ggatgtctat gaacatgctt taacgattac cgcctggcag cagatttacg
     2221 atcagctgca tccgggcaag tttcatggtg aatttacgga aattctactc gatgatattc
     2281 aggtttttcg tgaatacacc ggtctggcgc tgcgtcagtc gtgcctggtc tggccgaact
     2341 cgttctggtt tggcattccg gcgacgcgcg gtgagcaggg atttatcggt tcgcaatgtc
     2401 tgggaagcgc ggaaatcgcc acccgccctg gtggcactga atttgaactg agcacgccgg
     2461 atgattacac gatcctgggc gtggtgcttt ctgaagatgt catcacccgg caggctaact
     2521 ttttgcataa cccggatcgg gtattacata tgctgcgtag ccagtcggcg ctggaagtga
     2581 aagagcagca taaagccgcg ctgtggggct ttgtccaaca ggcgctggcg acgttttgcg
     2641 agaacccgga aaatctccat cagcctgcag tgcgaaaagt gctgggggat aatttgctaa
     2701 tggcgatggg ggcgatgctg gaagacgcgc aaccaatggt gacggcggaa agcatcagtc
     2761 atcagagtta ccgtagatta ctttcccgcg cccgtgaata tgtgctggaa aatatgtctg
     2821 agccggtgac ggtgctggac ttgtgtaatc aactgcatgt cagtcgccgc acgctacaaa
     2881 acgcgtttca cgctatttta ggcattggcc caaacgcgtg gctgaaacgc attcgcctga
     2941 acgccgtacg ccgcgaactg ataagcccgt ggtcgcaaag cacaacggta aaagacgccg
     3001 ccatgcagtg gggattctgg catctggggc aatttgtcac ggattaccag cagctgtttg
     3061 ccgagaagcc gtcgttgacg ttgcatcagc ggatgcggga atgggggtga gggagttaca
     3121 cccaatccct gaccttaata aactcactta acgccgcttc tgggctgcca tcttttggct
     3181 gataatcata ctcccagcgt accagtggcg gcattgacat caggatcgac tcggtgcgcc
     3241 cgccagtttg caggccaaac agagtgccgc gatcccagac cagattgaac tcgacataac
     3301 gaccgcgacg gtagagctga aaattgcgct cgcgctcgcc gtaggccatt gctttacgtc
     3361 gctctacaat tggtaaataa gcgtcggtgt agcctttgcc taccgcctgc ataaaggcaa
     3421 aacagtggtc gaaatctggc gtgttcagat catcaaagaa cagcccgcca ataccgcgct
     3481 gttcgttgcg atgtttgagg tagaagtaat cgttgcacca ctttttgtaa cggggataaa
     3541 cgtcttcacc aaatggcagg cacaggtcac gggcggtgcg gtgccagtga atggcgtctt
     3601 cttcaaaacc atagaaaggg gttaaatcga agccgccgcc aaaccaccag acgggctctg
     3661 cacccggttt ttcggcaata aaaaaacgca cattcgcgtg gctggtggga acatacgggt
     3721 tatgcggatg cactaccagt gaaacgccca tcgcctcgaa actgcgcccg gcaagttccg
     3781 ggcgatgagc ggtggcggaa gcaggcatcg cctcgccgtg gacgtgagaa aagttgacgc
     3841 ctgcctgttc gaaaacacca ccattacgca acacccgact acgcccgccg ccgccagctt
     3901 cgcgctgcca actatcttcg acaaattctg cgccatcgac ggcggtcagc tgctgacaaa
     3961 tcgtatcctg aaggttgagc agaaactgtt taacctggtg tgcgtcgggt ttcataactt
     4021 atcgcttttt cgaatgtgct ttctggttgt cgaaccagtg gaaataactg atcacgcctt
     4081 cagcaatcgc tgtggcgatt ttctgacgaa acgccgccgt gcctaacagc cgctcttctt
     4141 ccgggttggt gataaacgag gtttccacca gcaccgaagg aaccgacggc gatttcaaca
     4201 ccacaaacgc ggcttgttcg gtgttgcggc tgtgcagttt atgcaccggc ttaatctttt
     4261 tcagaatatg cgagccaagc gtcaggctgt ttttaatagt atcggtttgc accagatcaa
     4321 acagcacttg ctgcaatagg tgatccttgt cagtcgcctt tttaccggca acttcatcgg
     4381 cgcggttttc gcgttcagac aggtatttcg ccattgcgct acttgcccca cggttagaga
     4441 gggcaaatac cgaagcaccg gcagctttcg ggttggtaaa gccatcggca tgaattgaca
     4501 taaacagatc tgcgccatgt ttatgggcga tttcaacgcg atcgtaaagt gggataaacg
     4561 tatcgccaga acgcgttaaa cgcgcatcaa tcccatgatt acgcaaaatg gaacggacgt
     4621 ttttagcaat cgccagcacc acatgttttt ctttcgaacc gttgcgtccg atcgctccgg
     4681 tatcaattcc gccgtggcct ggatcgagaa caacgacacg tttgccgcca gattttttgg
     4741 ctttcggctt gctgtgtccg ttgctggttt ttaaaggttc gtctttggcg atggcttgcg
     4801 acattcctga caacgtcagg gcagccaaac cggctttcag cacctggcgg cgcgaagtga
     4861 gtgtttttag tggtttaaaa gtgctcatac ggcctgagtt gtaataataa agttccagat
     4921 gttatatcgt atcgcgtaat ccgttacgac ggtttgatgt tgagaattgt tttacttttc
     4981 atttcaatag ttgacaactc cccattatgc cactttttca accgattttc gtcagatatt
     5041 ggctaattct accgttcacg ccataatcag ccttttaacc cgcaaaaagg taacgaatac
     5101 catggagata cgcgtatttc gccaggaaga tttcgaagag gtcatcaccc tttgggagcg
     5161 ttgcgacttg ctgcgtccgt ggaacgatcc ggaaatggac atcgagcgta agatgaacca
     5221 tgacgtcagt ttgtttttgg tcgctgaggt gaacggtgaa gtggtcggaa cggtgatggg
     5281 cggttatgac gggcatcgcg ggtctgctta ttatcttggc gtgcatccag agtttcgtgg
     5341 gcgtgggatt gccaatgcgt tgcttaatcg gctggagaaa aagctgattg ctcgtggctg
     5401 cccgaaaatt cagatcaatg tgccggaaga taacgacatg gtgctcggaa tgtatgaacg
     5461 cctgggatat gaacacgccg acatgctgag tctgggtaag cgtttgattg aagatgaaga
     5521 gtactgagtt ccatcctgtc cattatgatg cgcacggacg cctgcgttta cccttgctct
     5581 tctggcttgt gctattgctt caggcgcgaa cctgggtgct gtttatcatt gccggtgcgt
     5641 cgcgcgagca gggtactgcg ctgctaaatc tgttttatcc cgatcacgat aatttctggc
     5701 tggggttgat tcccggtatt ccggcggtgc tggcgttttt gttgagcggt cggcgggctt
     5761 cgtttcctcg cacctggcat gtgctctatt ttctgttgct gttggcgcag gtggttttac
     5821 tttgctggca accgtggctg tggctgaacg gtgaatccgt tagcggtatc ggtctggcgc
     5881 tggtagtggc ggatattgtg gcgttaatct ggctgctgac caatcgacgt ttacgcgctt
     5941 gttttaatga agaaaaagaa taacgcagag gtgcgctttg tttatgccgg atgcggcgtg
     6001 aacgccttat ccggcctaca aaacatcgaa aattcaatat attgcaggag aaagtaggcc
     6061 tgataagcgt agcgcatcag gcaattttgt gtttgtcatc aacctttaac ggcacttttt
     6121 ggtgaatttg cactccaagc aacgttattg aataaccaaa ggaagtgaca tgaaatcgct
     6181 gcgtttaatg ttatgcgcta tgccgttgat gctgaccggc tgttccacga tgtcgtcagt
     6241 taactggtcg gctgctaacc cgtggaactg gtttggatcg tccaccaaag tgagcgagca
     6301 gggcgtgggt gaattaacgg cgtccacacc actgcaagaa caagccattg ctgatgcgct
     6361 tgatggcgat tatcgcctgc gcagcggaat gaaaaccgcg aacggcaacg tggtgcgctt
     6421 ttttgaagtg atgaaaggcg acaacgtggc gatggtgatt aacggcgatc aaggcacgat
     6481 cagtcgcatt gacgtgctgg atagcgatat tcctgctgac accggtgtta aaatcggtac
     6541 accgtttagc gacctttaca gcaaagcatt tggcaattgc caaaaagctg atggtgatga
     6601 taatcgtgcc gtcgaatgta aagccgaagg cagtcaacat attagctacc agttcagagg
     6661 ggaatggcgt ggtcctgaag ggttaatgcc ttcggacgat accctgaaaa actggaaagt
     6721 cagtaaaatt atctggcggc gttaatttgc gtctgaacaa accgccgccg cgaaaaaaca
     6781 cgtaaaatag cgctcaacaa tgccacggat tgcgtggcat tcttattttc aggaggaaca
     6841 atgtctcagg ttcagagtgg cattttgcca gaacattgcc gcgcggcgat ttggatcgaa
     6901 gccaacgtga aaggggaagt tgacgccctg cgtgcggcca gtaaaacatt tgccgacaaa
     6961 ctggcaactt ttgaagcgaa attcccggac gcgcatcttg gtgcggtggt tgcctttggt
     7021 aacaacacct ggcgcgctct gagcggcggc gttggggcag aagagctgaa agattttccg
     7081 ggctacggta aaggccttgc gccgacgacc cagttcgatg tgttgatcca cattctttct
     7141 ctgcgtcacg acgtaaactt ctctgtcgct caggcggcga tggaagcctt tggtgactgc
     7201 attgaagtga aagaagagat ccacggcttc cgttgggtgg aagagcgtga cctgagcggc
     7261 tttgttgacg gtacagaaaa cccggcgggt gaagagacgc gccgcgaagt ggcggttatc
     7321 aaagacggcg tggatgccgg cggcagctat gtgtttgtgc agcgttggga gcacaacctg
     7381 aagcagctca accggatgag cgttcacgat caggagatga tgatcgggcg caccaaagag
     7441 gccaacgaag agattgacgg cgacgaacgt ccggaaacct ctcacctcac ccgcgttgat
     7501 ctgaaagaag atggcaaagg gctgaagatt gttcgccaga gcctgccgta cggcaccgcc
     7561 agtggcactc acggtctgta cttctgcgcc tactgcgcgc gtctgcataa cattgagcag
     7621 caactgctga gcatgtttgg cgataccgat ggtaagcgtg atgcgatgtt gcgcttcacc
     7681 aaaccggtaa ccggcggcta ttacttcgcg ccgtcgctgg acaagctgat ggcgctgtaa
     7741 gcgtttctga ttctatgatt aaaggccagc cagtaacaaa actgactggc ctttttatta
     7801 cttttgcttc aacgccgcat acacctgatc aactacccaa ccataagttg caatcggtaa
     7861 ctgaccgctt tcgaacatat tgggattttt ttgtggatcg gcaactggcg aatggggctt
     7921 gttgcttaac atcacaatcg ccatatgatt gaccggatcg ataacggtta ctgtcccggt
     7981 ccagccagtg tgaccgtagg tttgcgggct tgccagcgtg ccaaacgtcg gcgtcatggt
     8041 ggcattacca ttcacgcgcc agccgaggcc aaaagtggca tcttccttag agctggtggt
     8101 gaacatcttc accgtttccg cactgaacag ctgcacatcg ccatagcccc cgccgttcag
     8161 catcgtttgc attaacaccg caatatcgcc ggtattggaa aacaaacctg cgtgcccgga
     8221 aacgccgccc atcgaataga aggctttttc atcgtgcacc tgaccccaga gagtggaggt
     8281 gcggatattc gggaaatgga tcacgccatc gcgggtattg ccgttcaatt ccgtggcggc
     8341 aatttgttgc ggtttaaagc ctttcagcag cgggttaaat accgtatgtg tcaggccgag
     8401 cgggcgataa atcgactctt caacatagcg gtcaagcggc tgaccggtaa ccgactcgac
     8461 gataaatcca agcagcatat aatcgacatc gctgtagata tgtttgctgc cgggctgata
     8521 ttccagcggc gtgcgcttga tcatctccag cgtctggcct ttatcctagg aatataacgc
     8581 gcccgcgacc gctttattcg ggtattgcgg atctgccggg aaaccgccgc tgtgatgcag
     8641 caggtcagaa atccgcaggg tgtttttgcc tttaatggtg tcatttggac tatcggcaaa
     8701 ccccggaata tatttcgcaa tccgatcgtc aggatgcagt ttgccttcgc tcatcagctt
     8761 ttgcagggcg aagttcgtgg cgtacatttt ggtgtttgag gccaggtcat acagcgtccc
     8821 ggtggtggct ttgacaggct gttccatcaa cacgctgcca tcgtactttt tcgccgctcc
     8881 ccaggctttg cgatacacaa tctgattatc tttaatgatc agcaggttta cgccgggata
     8941 accggcatca acttgctggc taatccagcg atccatctgg ttaagccgtt tgacgttaaa
     9001 ccctgctttc tctggcgagc tttctgtcag aacagggtat tttgcggcgc tgacgctaca
     9061 actaacagcc agcagagaaa gatagagcat tgtccgtttc atgatatcag tccagattga
     9121 cgttacggca gccaaagagc gtggtgaaaa taaacccgca aacccatgcc accagaatcc
     9181 cgccagcata aaccgccatg gccggaagga tgccttgtgc ggaagtcatc agcggcagcg
     9241 ctaccagacc agacggccca agggcgctgt ttaagcccat cggcagaccc caccaggcta
     9301 tcaggccgat aaacaaaccg cccgccgcac cgcctaaaca ggcggtgaca aacggcttca
     9361 tgcggggcag ggtgacaccg taaatcagcg gttcaccaac gcccagcagg ccgggaataa
     9421 tcgccccgcg tacctgactg cgtagcgcac tgtgcggttg cgaccgccag tagagtgcca
     9481 gcgccgcgcc cacctggccc gcgcctgcca ttgaaaggat gggaaataag ctgttgaatc
     9541 cctggctgtc cattaacgcg aggtaaacag gaataaagcc ctgatgcacg ccaaatacca
     9601 cggcgatcag gaacagcccg gctaaaaccg cacaaccgaa cggattactg ttcaggtgca
     9661 taaacagcca tgacatacct tcgaataacc agccacccag cggcataatg atcaggtacg
     9721 caagcgtagc ggtgatcagc agggtgatta acgaggtcag cagcatgtcg agatcgtccg
     9781 gcataaagcg gcgcaccatg ccttcaatgc gggcgcaggc ccacgcggca atcagcacgc
     9841 cgataatatt gccgcgcgga tcgatgggca gaccaaagaa atcgtgaaaa ccggcgtagt
     9901 aaccggtggt tgcagcgggg ttataaccga gcaaaaagag tgcggcaata attgcgccat
     9961 tgacgcccgt gccgccaaat gcctgggcgg cgttatagcc caccagaatc accaggaagg
    10021 tgaacaaacc tttgctgaac accttcataa aattcagcgc gtcgggtagc gtgccctgag
    10081 catctgccgg aacgtgcatc accgtggcaa ttaacgtcgc tatccccagc agcagaccgg
    10141 cggcaataaa accggggatc agcggcgtga agatggtggc gaatttggcg agaaattgtt
    10201 gcacgccgga ggtttgtttg gcttttaact gacgtttgtt ctgggcggcg atttctgcgg
    10261 catcctgtac cggtgcctcg cccagcagct cgctcatcgc ttttgcggca cgatgcgctt
    10321 taccaggtcc aaaaacgacc tgcacctggt cgctggtcaa aatgacgctc ttcacgcctt
    10381 ccagcgtttt gatattggga tcaaccagtg aactgtcatg tacacccaga cgcaggcgcg
    10441 tcatacagtt accacaactg gcgatatttc ccggtccgcc gacacgggta agaatggtgt
    10501 tcagaagttc actgctgatc tctttggcca tgggttattc cttgtctaaa acctgacgaa
    10561 taaagccgcc gtgttgatcc aggcgttttt tagcttctgc ggcatcgaga tttttcagca
    10621 ccatcacaat ggccgtttta cagttgcgct cgcaggcaat taacgccgct tccgcttgtt
    10681 cggcattaca tccggtggcg tttttaacga tattgacctg gcgcacatgc agtttttcgt
    10741 tggtggcgac cacatcgacc ataaggttgc cgaacacttt gccggattta atcatcagcc
    10801 cggtggaaag catattgagc accagtttct gcgctgtacc tgctttcatc cgcgaagaac
    10861 cggtaacaac ttcggcacct acaatcggtg taatggcaaa ctcagcggtg gttgaaacgg
    10921 cgctccccgg attacaggaa attcccactg tgcggcagcc gagctggcgt gcgtattcca
    10981 gtccggcaat cacatacggc gtgcgaccgc tggcagcaat gccaaccacc acatcctgtg
    11041 ccgttaaatt aatatttttc agatcattaa caccgccttc ccggctatct tccgcgcctt
    11101 ccaccgcgtg ctgaatggca tattcgccgc cagcaatcaa accaaccacc agacccggtt
    11161 tcacgccgta ggtgggcgga cattcgctgg catccagaat ccccagacga ccggatgttc
    11221 ccgcaccgag gtaaatcaga cgcccgccgc cgcttacctg ggcgtggata acatcgatcg
    11281 ccgcggcgat atccggcagt acgcgctcaa cggcaagcgg tacggtttta tcttcatcgt
    11341 tgataatccg gcacatttcc agcgttgata cgcggtcaat ttcagccgag gcggcgttcg
    11401 agccttcagt aatcatcttt tcaagttgca tcggtggtga ccttactatt tacgatcaaa
    11461 taattgcaga tgtatggaat catatatcct gaattgacag acttaaagga atcattgagt
    11521 ctacactcgc agagtgtgaa gagcgtcata agaacttaag cggaatttat gctgccagcc
    11581 caggagagtg gaagatgttg tacctgacga aaataagcaa tgcggggagt gaattcaccg
    11641 aaaacgagca aaaaatcgct gactttctgc aggccaacgt gagtgagctg caatccgttt
    11701 cttcacggca gatggcgaaa cagctcggca ttagccagtc gagcatagtg aaatttgccc
    11761 aaaaactcgg cgcgcaagga tttactgaat tgcgtatggc gttaataggc gaatacagtg
    11821 ccagccggga gaaaacgaat accacggcgc tgcacctgca cagttcgatt accagtgatg
    11881 attcgctgga agtgattgcc cgcaaattga atcgcgaaaa agagctggcg ctggagcaaa
    11941 cctgtgcgtt gttcgactac gcgcggctgc aaaaaatcat tgaggtcatc agtaaagcac
    12001 cgtttatcca gataacgggc ctgggcggat cggcgctggt ggggcgcgat ctgtcgttca
    12061 aactgatgaa aattggctat cgcgtggcct gcgaagccga cacgcacgta caagccaccg
    12121 tttcccaggc gttgaaaaaa ggcgatgtac aaatcgctat ctcttacagc ggtagtaaaa
    12181 aagagattgt cttgtgcgta gaagcggcac gaaagcaggg ggcaacggtg attgccatta
    12241 cttctctggc tgactctccg ctgcggcggc tggcgcattt cacgctcgat accgtttccg
    12301 gtgaaaccga atggcgtagc tcgtcgatgt ctacccgcac ggcgcaaaat tctgttaccg
    12361 atttactgtt tgttggtctt gtgcaactca atgatgtggc gtcattgaaa atgattcagc
    12421 gcagcagtga gctaacacaa cgcctgaaat gatgcataaa gcagcgactg gattgagatt
    12481 ttcctgaatt agtgagctga tccgcagcaa tattttgttt atcctgtatt ttcagaggga
    12541 atggagtgta acgctctgta ttaacaagga gagcattaaa atgggtaaac tcacgggcaa
    12601 gacagcactg attacgggcg cattgcaggg aattggcgaa ggaattgcca gaacttttgc
    12661 acgtcatggc gcgaacctaa tcttgctgga tatctcccct gagatcgaaa agctggcgga
    12721 cgaactgtgt ggtcgtggtc atcgctgtac ggcggttgtc gccgatgtgc gtgacccggc
    12781 gtcggtagcc gcagctatca aacgcgcgaa ggaaaaagaa gggcgcattg atatcctggt
    12841 gaataacgca ggcgtttgtc gtctgggcag tttcctcgat atgagcgatg acgatcgcga
    12901 tttccatatt gatatcaata ttaaaggcgt atggaacgtc acgaaggcgg tgctgccgga
    12961 gatgattgcg cgcaaagatg gtcgcattgt gatgatgtct tcagtcactg gtgatatggt
    13021 ggccgatcct ggcgaaacgg cgtacgcctt aacgaaagcg gcgattgttg gcctgacaaa
    13081 atcgctggcg gtggagtacg cgcagtctgg tattcgcgtt aacgccattt gcccgggata
    13141 cgtgcgcaca ccaatggcgg aaagcattgc ccgccagtcg aacccggaag atccagagtc
    13201 ggtgctgact gaaatggcga aagcaatccc gatgcgtcgc ctcgccgatc cgctggaagt
    13261 cggcgaactg gcggccttcc tcgcatcgga tgaatccagc tatttaaccg gtacacagaa
    13321 tgtgattgat ggcggcagca cactgccgga gacggttagc gtcggtatct gattcacctc
    13381 tgtttcctcc ctgcatgtgt ggggaggatt tcgtcttgaa ctaagttcac caggctattt
    13441 tatttgtcat tttggccccg ggcagtgctc gaaatactca cgtactatgt gtacgctccg
    13501 gtttctccgc gctgtccgtg tccaaactgc ctgcaacaat tacgcctgtt gaaccaagtt
    13561 cttattccct ttttaacttc caaatcacca aacggtatat aaaaccgtta ctcctttcac
    13621 gtccgttata aatatgatgg ctattagaaa gtcattaaat ttataagggt gcgcaatggc
    13681 cgttaactta ctgaaaaaga actcactcgc gctggtcgct tctctgctgc tggcgggcca
    13741 tgtacaggca acggaactgc tgaacagttc ttatgacgtc tcccgcgagc tgtttgccgc
    13801 cctgaatccg ccgtttgaac agcaatgggc aaaagataac ggcggcgaca aactgacgat
    13861 aaaacaatct catgccgggt catcaaaaca ggcgctggca attttgcagg gcttaaaaac
    13921 cgacgttgtc acttataacc aggtgaccga cgtacaaatt ctgcacgaca aaggcaagct
    13981 gatcccggct gactggcagt cgcgcctgcc gaataatagc tcgccgttct actccaccat
    14041 gggcttcctg gtgcgtaagg gcaacccgaa gaatatccac gactggaacg acctggtgcg
    14101 ctccgacgtg aagctgattt tcccgaaccc gaaaacgtcg ggtaacgcgc gttataccta
    14161 tctggcggca tggggcgcag cggataaagc tgacggtggc gacaaagcca aaaccgaaca
    14221 gtttatgacc cagttcctga aaaacgttga agtgttcgat actggcggtc gtggcgcgac
    14281 caccactttt gccgagcgcg gcctgggcga tgtactgatc agcttcgagt cggaagtgaa
    14341 caacatccgt aaacagtatg aagcgcaagg ctttgaagtg gtgattccga aaaccaacat
    14401 tctggcggaa ttcccggtgg cgtgggtcga taaaaacgtg caggccaacg gtacggaaaa
    14461 agcagcaaaa gcctacctga actggctcta cagcccgcag gcgcagacca tcatcaccga
    14521 ctattactac cgcgtaaata acccggaagt catggacaaa ctgaaagata aattcccgca
    14581 gaccgagctg ttccgcgtgg aagacaaatt tggctcctgg ccggaagtga tgaaaaccca
    14641 cttcaccagc ggcggcgagt tagacaagct gttagcggcg gggcgtaact gatgtttgca
    14701 gtttcatcaa gacgcgtgct gccgggcttt accttaagcc tcggcaccag tctgctgttt
    14761 gtgtgcctga ttttgctgct gccgctctcc gcgctggtga tgcagctggc tcagatgagc
    14821 tgggcgcagt actgggaggt gatcaccaac ccacaagtgg tcgcggccta caaagtgacg
    14881 ctgctgtcgg cgtttgtggc atcgattttt aacggcgttt tcggtctgct gatggcgtgg
    14941 attttaacac gttatcgctt tccgggccgc acgctgcttg atgcgctgat ggatttaccc
    15001 tttgcgctgc caacggcagt cgccggttta acgctggcct cgctcttttc cgtaaacggt
    15061 ttttacggtg aatggctggc gaagtttgat atcaaagtca cctatacctg gcttggtatt
    15121 gcggtggcga tggcctttac cagcattccg tttgtggtgc gtaccgtgca gccggtgctg
    15181 gaagagttag gcccagaata tgaagaagcg gcggaaacgc ttggtgcaac gcgctggcag
    15241 agtttctgca aagtggtgct gccggaactt tctccagcgc tggtggcggg cgtggcgttg
    15301 tcgtttaccc gtagtcttgg tgagtttggc gcggtgatat ttatcgccgg gaacatcgct
    15361 tggaagacgg aagtgacgtc gctgatgatt tttgtgcgct tgcaggagtt tgattacccg
    15421 gcggcgagcg cgattgcttc ggtgatcctc gcggcatccc tgctgctgct gttctcaatt
    15481 aacactctgc aaagtcgctt tggtcggcgt gtggtaggtc attaatggcg gaagttaccc
    15541 aattgaagcg ttatgacgcg cgcccgatta actggggcaa atggtttctg attggcatcg
    15601 ggatgctggt atcggcgttc atcctgctgg tgccgatgat ttatatcttc gtacaggcgt
    15661 tcagcaaagg gctgatgccg gttttacaga atctggccga tccggacatg ctgcacgcca
    15721 tttggctgac ggtgatgatt gcgctgattg ccgtaccggt gaacctggtg ttcggcattc
    15781 tgctggcgtg gctggtaacg cgctttaact tccccggacg ccagttactg ctgacgctac
    15841 tggacattcc gtttgccgta tcgccggtgg ttgcaggtct ggtgtatctg ctgttctacg
    15901 gctctaacgg tccgctgggc ggctggctgg atgaacataa tttgcagatt atgttctcct
    15961 ggccgggaat ggtgctggtc accatctttg tgacctgtcc ttttgtggtg cgcgagctgg
    16021 tgccggtgat gttaagccag ggcagccagg aagacgaagc ggcgattttg cttggcgcgt
    16081 ctggctggca gatgttccgt cgcgtcacat tgccgaacat tcgctgggcg ctgctgtatg
    16141 gtgtggtgct aaccaacgcc cgcgcgattg gcgagtttgg tgcggtgtcg gtggtttccg
    16201 gctcgattcg cggcgaaaca ctttcgctgc cgttacagat tgaattgctg gagcaggact
    16261 acaacaccgt cggctccttt accgccgccg cgctgttgac gctgatggcg attatcaccc
    16321 tgtttttaaa gagtatgttg cagtggcgtc tggagaatca ggaaaaacgc gcgcagcagg
    16381 aggagcatca tgagcattga gattgccaat attaagaagt cgtttggtcg cacccaggtg
    16441 ctgaacgata tctcactgga tattccttct ggtcagatgg tcgcgctgct ggggccgtcc
    16501 ggttccggaa aaaccacgct gctgcgcatt attgccgggc tggagcatca aaccagcggg
    16561 catattcgct tccacggtac cgacgtgagc cgcctgcacg cacgcgatcg taaagtcggt
    16621 ttcgtgttcc agcattacgc gctgttccgt catatgacgg tgttcgacaa tatcgctttt
    16681 ggcctgacgg tgctgccacg tcgcgagcgc ccgaatgccg cagccatcaa agcgaaagtg
    16741 acaaaattgc tggagatggt ccagcttgcg catctggcgg atcgttatcc ggcacagctt
    16801 tccggcggcc agaaacagcg cgtggcgctg gcgcgcgcgc tggctgttga accgcaaatt
    16861 ctcctgcttg atgaaccgtt tggcgcgctg gatgcgcagg tgcgtaaaga gctgcgtcgc
    16921 tggctgcgtc aactgcatga agagctgaaa ttcaccagcg tgttcgtgac ccacgaccag
    16981 gaagaagcga ccgaagtagc tgatcgtgta gtggtgatga gccagggcaa tatcgagcag
    17041 gctgatgcgc cggaccaggt atggcgcgaa ccagcgaccc gatttgtgct cgaatttatg
    17101 ggcgaagtga accgcctgca gggaaccatt cgcggcgggc agttccatgt tggcgcacat
    17161 cgctggccgc tggggtatac gcctgcgtat caggggccgg tggatctctt cctgcgcccg
    17221 tgggaagtgg atatcagccg ccgtaccagt ctcgattcgc cgctgccggt acaggtactg
    17281 gaagccagcc cgaaaggtca ctacacccaa ttagtggtgc agccgctggg gtggtacaac
    17341 gaaccgctga cggtcgtgat gcatggcgac gatgccccgc agcgtggcga gcgtttattc
    17401 gttggtctgc aacatgcgcg gctgtataac ggcgacgagc gtatcgaaac ccgagatgag
    17461 gaacttgctc tcgcacaaag cgcctgatag gttgagtgaa tgttaaacgc ccggaggcgc
    17521 ttcccgcgat ccgggctttt taatggcaag gtttgtaacc tgtagacctg ataagacgcg
    17581 caagcgtcgc atcaggcaac accacgtatg gatagagatc gtgagtacat tagaacaaac
    17641 aataggcaat acgcctctgg taaagttgca gcgaatgggg ccgaataacg gcagtgaagt
    17701 ctggttgaaa ctggaaggca ataacccggc aggttcggtg aaagatcgtg cggcactttc
    17761 gatgatcgtc gaggcggaaa agcgcgggga aattaaaccg ggtgatgtgt taatcgaagc
    17821 caccagtggt aacaccggca ttgcgctggc aatgattgcc gcgcttaaag gctatcgcat
    17881 gaaattgctg atgcccgaca acatgagcca ggaacgccgt gcggcgatgc gtgcttatgg
    17941 tgcggaactg attcttgtca ccaaagagca gggcatggaa ggtgcgcgcg atctggcgct
    18001 ggagatggcg aatcgtggcg aaggaaagct gctcgatcag ttcaataatc ccgataaccc
    18061 ttacgcccat tacaccacta ccgggccgga aatctggcag caaaccggcg ggcgcattac
    18121 ccattttgtc tccagcatgg gaacaaccgg cactatcacc ggcgtttcac gctttatgcg
    18181 cgaacaatcc aaaccggtga ccattgtcgg cctgcagccg gaagaaggca gcagtattcc
    18241 cggcattcgc cgctggcctg cggaatatct gccggggatt ttcaacgctt ctctggtgga
    18301 tgaggtgctg gatattcatc agcgcgatgc ggaaaacacc atgcgcgaac tggcggtgcg
    18361 ggaaggaata ttctgtggcg tcagctcagg cggcgcggtt gctggagcac tgcgggtggc
    18421 aaaagctaac cctggtgcgg tggtggtagc gatcatctgc gatcgtggcg atcgctacct
    18481 ctccaccgga gtgtttgggg aagagcattt tagccagggg gcggggattt aagattattg
    18541 cgcaggcacc gttttatccg tctgcgcaat tagcgcatgt aaaaaaggct gtgcgttctc
    18601 atcgctctta ccggggatct tcacaatata cggcttcccg gtaatcgatg acgacgaagc
    18661 aaccttatca ataaactgct cggcagtgtc aatgcggtta cgggtattgc cgagcttcag
    18721 acgcagatga gaaaccgctt catcgcaggt atgttcatca ccgttgcgca caaatatcaa
    18781 atcctttttc tgtgataatc cctccagcat ggcgttgatg cgggcttctt catgggcagt
    18841 taacttcgcg taagcgggga gtgtcattag tagtgtaatg accagacaaa tgattttctt
    18901 cattgaatta ccttatcctt gttttgtaat agccgatttg actgccagaa tcaggtaaag
    18961 tttcggttgg aatacgatga ggatcatcgg caaggagaaa aaattaaatg agtagtttgt
    19021 tgttgtttaa cgataagagc agggcgctgc aggcggatat cgtcgccgtg cagtcgcagg
    19081 tggtttacgg cagcgtgggc aacagcattg ccgtgcctgc tatcaaacag aacggtctga
    19141 atgtttttgc cgtgccgacg gtattgctga gcaatacgcc gcattatgac actttctacg
    19201 gtggtgcgat tccggatgaa tggtttagcg gttatttgcg tgcgcttcag gagcgtgatg
    19261 cgctgcgcca gctgcgcgct gtaaccacgg gctatatggg aacggcatcg caaatcaaaa
    19321 tccttgccga gtggctgact gcgctacgca aagaccatcc tgacctattg atcatggtcg
    19381 atccggtgat tggcgatatt gatagcggaa tttatgtcaa acctgacctt cccgaggcgt
    19441 atcgacaata tttactgccg ctggcgcagg gaattacccc caatatcttt gagctggaaa
    19501 tcctgaccgg taaaaattgc cgcgatctcg acagtgccat tgctgccgca aaaagtctgc
    19561 tttcagacac attaaaatgg gtggtgatta ccagcgcctc cggtaatgaa gaaaatcagg
    19621 agatgcaggt ggtggtggtc agtgccgaca gcgtgaatgt catttcccat tcacgggtaa
    19681 aaaccgacct gaaagggact ggcgacctgt tttgtgctca gcttatcagt ggtttgctga
    19741 aagggaaggc gttaaacgat gcggtgcacc gtgcggggtt gcgcgtactg gaagtgatgc
    19801 gctacaccca gcagcatgag agcgatgaat tgattttgcc gccgctggcg gaagcataaa
    19861 aaatggcgcc gatgg
//
LOCUS       DADKRT010000070        19782 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.071, whole genome shotgun sequence.
ACCESSION   DADKRT010000070 DADKRT010000000
VERSION     DADKRT010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19782
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.071"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            49..993
                     /locus_tag="JQ356_002082"
     CDS             49..993
                     /locus_tag="JQ356_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000261200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY4622176.1"
                     /translation="MVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMIS
                     GYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLW
                     FFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYIN
                     GDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADT
                     WYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGI
                     ELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS"
     gene            complement(1035..1472)
                     /locus_tag="JQ356_002083"
     CDS             complement(1035..1472)
                     /locus_tag="JQ356_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiaB family inner membrane protein"
                     /protein_id="HAY4622177.1"
                     /translation="MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYY
                     FAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLS
                     EKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE"
     gene            complement(1518..1859)
                     /locus_tag="JQ356_002084"
     CDS             complement(1518..1859)
                     /locus_tag="JQ356_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622178.1"
                     /translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
                     FGNYAYLRAEKLGQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVC
                     LFGQMRLFRSV"
     gene            complement(2024..2215)
                     /locus_tag="JQ356_002085"
     CDS             complement(2024..2215)
                     /locus_tag="JQ356_002085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622179.1"
                     /translation="MGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAY
                     QPRRETFRRLYQQLLPLMA"
     gene            complement(2148..3476)
                     /gene="xylB"
                     /locus_tag="JQ356_002086"
     CDS             complement(2148..3476)
                     /gene="xylB"
                     /locus_tag="JQ356_002086"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004987293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HAY4622180.1"
                     /translation="MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQD
                     PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
                     QECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
                     TGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAK
                     AWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHS
                     FCHALPQRWHLMSVMLSAASCLDWVAKLTGLCNVPALIAAAQQADESAEPVWFLPYLS
                     GERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTL
                     IGGGARSEYWRQMLADISGQQLDYRTGGCGASTGRSKAGADCGESREIAH"
     gene            complement(3593..4870)
                     /gene="xylA"
                     /locus_tag="JQ356_002087"
     CDS             complement(3593..4870)
                     /gene="xylA"
                     /locus_tag="JQ356_002087"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HAY4622181.1"
                     /translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVSFYCFHD
                     VDVSPEGASLKEYINNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
                     HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
                     HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNS
                     ELGQQILKGQMSLADLAKYAQEHNLSPVHQSGR"
     gene            5236..6207
                     /gene="xylF"
                     /locus_tag="JQ356_002088"
     CDS             5236..6207
                     /gene="xylF"
                     /locus_tag="JQ356_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4622182.1"
                     /translation="MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDR
                     DIFVKKAESLGAKVFVQSANGNGETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA
                     KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN
                     AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALTANNNKIDAVVASNDATAGG
                     AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN
                     GQEPKADTSLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL"
     gene            6285..7826
                     /gene="xylG"
                     /locus_tag="JQ356_002089"
     CDS             6285..7826
                     /gene="xylG"
                     /locus_tag="JQ356_002089"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HAY4622183.1"
                     /translation="MPYLLEMKNITKTFGSVKAIDNVSLRLNAGEIVSLCGENGSGKS
                     TLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENI
                     FLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDG
                     QHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKR
                     VNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQA
                     IAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQL
                     KVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQ
                     LVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHV
                     EKQSV"
     gene            7804..8984
                     /gene="xylH"
                     /locus_tag="JQ356_002090"
                     /pseudo
     CDS             7804..8984
                     /gene="xylH"
                     /locus_tag="JQ356_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312478.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="xylose ABC transporter permease XylH"
     gene            9062..10240
                     /locus_tag="JQ356_002091"
     CDS             9062..10240
                     /locus_tag="JQ356_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XylR family transcriptional regulator"
                     /protein_id="HAY4622184.1"
                     /translation="MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
                     FRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATD
                     NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL
                     ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI
                     DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS
                     TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI
                     HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNREVML
                     "
     gene            complement(10348..11172)
                     /locus_tag="JQ356_002092"
     CDS             complement(10348..11172)
                     /locus_tag="JQ356_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HAY4622185.1"
                     /translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
                     NKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
                     ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
     gene            11492..13522
                     /gene="malS"
                     /locus_tag="JQ356_002093"
     CDS             11492..13522
                     /gene="malS"
                     /locus_tag="JQ356_002093"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY4622186.1"
                     /translation="MKLASCFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPK
                     GTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGKYTLQIDTRSGTPT
                     LMISIQNAAEPVANLVRECPKWDGLPLTLDVSATFPEGAAVRDYYSQQIAIVKNGQIT
                     LQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMA
                     EIGTFHGGDLRGLINKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYY
                     TQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYL
                     SGDEVKKTLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNP
                     GFDDLTMSLAFLPDIKTESTTASGLPVFYKNKTDTHAKVIEGFTPRDYLTHWLSQWVR
                     DYGIDGFRVDTAKHVELPAWQQLKTEASSALREWKKTNPDKALDDKPFWMTGEAWGHG
                     VMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDT
                     RLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
                     ANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFVREHGDDKVLVIWAGQQ"
     gene            13700..14953
                     /gene="avtA"
                     /locus_tag="JQ356_002094"
     CDS             13700..14953
                     /gene="avtA"
                     /locus_tag="JQ356_002094"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HAY4622187.1"
                     /translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
                     EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIAL
                     TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
                     ISLAPSGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHK
                     PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNVFPGLDKPWPHTHQCMRMNYV
                     PEPEKIEAGVKILAEEIERAWAESH"
     gene            complement(15104..15577)
                     /locus_tag="JQ356_002095"
     CDS             complement(15104..15577)
                     /locus_tag="JQ356_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY4622188.1"
                     /translation="MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRI
                     RVIKDHSWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFG
                     AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
     gene            complement(15679..16527)
                     /gene="yiaJ"
                     /locus_tag="JQ356_002096"
     CDS             complement(15679..16527)
                     /gene="yiaJ"
                     /locus_tag="JQ356_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HAY4622189.1"
                     /translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
                     LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
                     IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
                     KIYMAFGHPDYVKSYWENHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENEL
                     GVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
                     DLGAIT"
     gene            16728..17726
                     /gene="yiaK"
                     /locus_tag="JQ356_002097"
     CDS             16728..17726
                     /gene="yiaK"
                     /locus_tag="JQ356_002097"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HAY4622190.1"
                     /translation="MKVTFEQLKAAFNRALISRGVDSETADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
                     LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPT
                     RDAKLQRIMDYVTTAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL"
     gene            17738..18206
                     /locus_tag="JQ356_002098"
                     /pseudo
     CDS             17738..18206
                     /locus_tag="JQ356_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418033.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
     gene            18324..18797
                     /gene="yiaM"
                     /locus_tag="JQ356_002099"
     CDS             18324..18797
                     /gene="yiaM"
                     /locus_tag="JQ356_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HAY4622191.1"
                     /translation="MKKILEVILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYL
                     FVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLK
                     TIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA"
     gene            18800..>19782
                     /locus_tag="JQ356_002100"
     CDS             18800..>19782
                     /locus_tag="JQ356_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HAY4622192.1"
                     /translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPDMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIW
                     ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTS
                     VVMFLVASAQVSTWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVG"
BASE COUNT         4993 a         4955 c         4803 g         5031 t
ORIGIN      
        1 cagcccaaaa tttactggat tgataacctg cgagggatag cgtgtttaat ggtggtgatg
       61 attcacacca ctacctggta tgtgaccaat gctcatagtg ttagccccgt cacatgggat
      121 atcgccaatg ttctgaattc tgcctctcgt gtcagcgtgc cgctattttt catgatttcc
      181 ggctatctct tttttggcga acgcagcgcc cagccgcgcc atttcttgcg tatcggctta
      241 tgtctgattt tttatagcgc aatcgcactg ctctacattg cgctgtttac ctccatcaat
      301 atggagttag cgctgaaaaa cctgctgcaa aagccagtgt tttaccactt gtggtttttc
      361 ttcgcgattg cggtgattta tctggtttca ccgctgattc aggtgaagaa cgtcggcgga
      421 aaaatgttgc tggtgctaat ggcggtgatt ggcattatcg ctaacccaaa cacagtgccg
      481 cagaaaattg acggttttga atggctgcca attaacttat atatcaatgg cgatactttt
      541 tactacattc tgtatggcat gttgggccgc gctataggga tgatggacac acagcataaa
      601 gcactgtcgt gggtgagcgc cgcgctgttt gcgacggggg tttttattat ctctcgcggg
      661 acattatatg aattgcagtg gcgcggaaat tttgccgata cctggtatct ttactgtggg
      721 ccgatggttt ttatctgcgc aatcgcgcta ttgactctgg ttaaaaacac gctggatacg
      781 cgtaccattc gcggacttgg cttaatctcc cgccattcat tgggtatata cggattccac
      841 gccttgatta tccatgcgct gcgcacccgg ggaattgagc ttaaaaattg gccaatactg
      901 gatattattt ggatcttttg cgcgacgttg gcagcgagtt tgttactttc tatgctggta
      961 caacgaatcg acagaaacag attagtgagt taagtaaaag cccgttcaca ttggactgac
     1021 cgggcttacg tgaattattc gctgtattct tcctgggtaa cctgtgtttc ttttggcggg
     1081 tttattccgg catcacgaat attcttctgc accgctactg caccaaacaa gcttaagaag
     1141 aaagccagtc cataaaaacc tttttcactg agtaataatg tcgcattcca cagacctacc
     1201 atcagtaatg caacagagat aataaagaca gtcaggcagg tcatataata aatggaagtg
     1261 gtcggtatgc cttcatactt gtcccgaacg gtcttttgat aagacgcagc agaaaacagt
     1321 cctaacacca gtacggcaaa ataataccct ttttcattta actgcatctc tgcattccat
     1381 agccctaaca gataggtaac gataccacca acgagagcta tccatgacac aatactaaag
     1441 gccggtgaat aggttgatat tttgttgtcc atcacagtat tcctttcatt cctgaatgtg
     1501 taagagcttt atgttgctca taccgagcga aacaaacgca tttgaccaaa caagcagaca
     1561 aaaaaggcga tggggtagat caccatttca taagcattga taggtgcatt taaaacaccg
     1621 ataaacaaga gaccgatagt gattaacgca actaactggc agatatgggt aaaaaaatta
     1681 tccagttgcc cgagtttttc tgcgcgaaga tatgcatagt taccaaaagt tgctgtcatt
     1741 aacacgccaa gaaaatagcc ttttccactt agcaatgggc atgagatcca tagcccaacc
     1801 agataaacca gcgccccgac aacaaataat agttttgcca cagtttttga ggttttcata
     1861 acgatctcca tatctaccag cgatacatta cgagtaacca acgaaagaca aaactgaaaa
     1921 atgccattaa caaatgattt tcagaataaa ttcatactaa atattaatta gtgagatata
     1981 tagatgtgaa ttatccccca cccggtcagg caggggataa cgtttacgcc attaatggca
     2041 gaagttgctg atagaggcga cggaacgttt cacgtcgtgg ctgataagcg gcataacgct
     2101 gcgcatctgg tagatgcgac tgttctaacg gtagctgcgg caacaactca atgagcgatt
     2161 tctctggatt cgccgcaatc tgcgccagcc ttgctgcgcc cagtgctggc cccacatccc
     2221 cccgtacggt aatcgagctg ctgaccgctg atatccgcca gcatctgacg ccagtactca
     2281 ctacgcgccc cgccaccaat caacgtaaca ctttgcggtt taatgccgca ggcatgcacg
     2341 acatccatgc catctgccag cgcataaccc acgccttcca gcactgctcg cgccagttca
     2401 ttggggccat gttgatgagt caaaccaaag aaaaccccct tcgcctgggg attattgtgt
     2461 ggtgtacgct cgccggaaag ataaggcaga aaccaaactg gctcggcact ttcatcagcc
     2521 tgttgagctg cagcgattaa agctgggaca ttgcacaggc cggttaattt cgcgacccaa
     2581 tccagacacg atgctgcact cagcattaca gacattaaat gccaacgctg cggtagcgca
     2641 tggcaaaagc tgtgtacagc gctttctggc ttgcttaaga acccttcgct gacagcaaaa
     2701 tagacccccg acgtccccag cgataacatt gcctgattag catcaaccat tcccacacca
     2761 actgcaccag ctgcattgtc gccaccgcct gcgacaactg gcaccgtcgc cataccccac
     2821 gctttcgcaa cttcaggtaa caaagcacca gtaatttcgc tgccttcgta taatgcgggc
     2881 atctggtcac gagataagtc gcaagcctgc agcatgacgt cactccagtc acgctttgcg
     2941 acatccagcc acatggtgcc agctgcgtca gacatatcgc tggcaaactc ccccgtcata
     3001 cgcagacgca agtaatcttt cggtaataat actttgtcga tttgacggaa tatctccggc
     3061 tcatgccgct gaacccatag caatttaggc gcagtaaatc cgggcatcat caggttgccg
     3121 gtaatcactc gtgattgcgg aactctcgct tccagcaaag tgcactcttg cgcacagcgc
     3181 ccgtcgttcc acaaaatggc agggcgcaat acccgttgtt gagcatccag taaggttgct
     3241 ccatgcatct ggccggcaat acccaatgct ttaacgtcct gcagagaatg ctgatcgccc
     3301 agagctttca ttgcgcgatc agttgcctgc caccactgtt ccgggtcttg ttccgaccag
     3361 agtggatgcg ggcgcgaaac ggtcagcttt tccgtttgcg aagcaaccac ctcaccctgc
     3421 tcgttgagca aaataacttt tacgcccgag gtgccaagat ctatcccgat atacatatcg
     3481 atcgttcctt aaaaaaatgc ccggtatcgc taccgataac cgggccaacg gactgcacag
     3541 ttagccgtta tttgtcgaac agataatgat ttaccagatt ttccagttgc tcctagcgac
     3601 cactctgatg caccggagac aaattatgtt cctgagcata tttggctaaa tctgccagtg
     3661 acatttggcc tttcaggatt tgctggccca attcgctatt ccagccggaa taacgctgcg
     3721 cgatgcgttt atccagctcg ccatcttcaa tcatgcgcgc tgcaattttc agcgccagtg
     3781 ccatcgtatc catcgcgccg atatgaccgt aaaacagatc atatttatca gtactttgac
     3841 gacgtacttt ggcatcgaag ttcagaccac cggtggtgaa accgcctgct ttgagaattt
     3901 catacatcac cagcgcattc tcttccacac tgttcgggaa ctggtcggtg tcccagccca
     3961 gttgcgcatc gccacggttg gcgtcgacag aaccgaacag gccaagcgca atggcggtgg
     4021 ctatttcatg atggaaagag tgacctgcca gcgtcgcgtg gttagcttca atgttcagtt
     4081 taatctcttt ttccagacca aactgtttca ggaagccata gaccgtcgcg gcatcgtaat
     4141 catattgatg tttagtcggt tcttgcggtt tcggttcgat aagcaacgtg ccctggaagc
     4201 cgattttatg tttatgctca accaccatct gcataaagcg gcccagttgt tcacgctcct
     4261 gacgcaagtc ggtatttaac agcgtttcgt aaccttcacg accaccccac aggacatagt
     4321 tttcaccgcc caatttatgg gttgcttcca tcgctgtaac aacttgcgtt gccgcccagc
     4381 tgaagacttc aggatctggg ttcgtcgccg cacccgcgcc atagcgaggg tttgtaaagc
     4441 agttagcggt tccccacagc agcttcacgc cgctctcttc ttgcttggct gccaggacat
     4501 caaccatttg cgcaaaatta ttgatgtact cttttaacga cgcgccctca ggggaaacat
     4561 ccacatcgtg gaagcaataa aatgacacat gtaacttgtg gaaaaactca aatgcgacat
     4621 ctgctttacg cttcgccaac gccagtgcct caccaggctg ctgccacgga cgattaaacg
     4681 cccccacacc aaacatgtcc gccccgttcc agcagaaggt gtgccagtaa caggcggcaa
     4741 aacgcaagtg ctcttccata cgcttaccca acaccagttc gtcgggattg tagtgacgga
     4801 atgctaacgg gtttgaggat tttgagcctt cataacgaac gcgatcgagc tggtcaaaat
     4861 aggcttgcat attgaactcc ataatcaggt aatgccgcgg gtgatggatg atgtcgtaat
     4921 attgggcact ccctttcagt tgctcaatta tgttatttca cactgctatt gagataattc
     4981 acaagtgtgc gctcgctcgc aaaataaaat gggatgatga aactgggtaa ttcctcgaag
     5041 ataaaaatgc aataagtaca attgcgcaac aaaagtaaga tctcggtcat aaatcaagaa
     5101 ataaaccaaa aatcgtaatc gaaagataaa aatctgtaat tgttttcccc tgtttagttg
     5161 ctaaaaattg gttacgttta tcgcggtgat tgttacttat taaagctgtc ctctaactac
     5221 agaaggccct acaccatgaa aataaagaac attctactca ccctttgcac ctcacttctg
     5281 cttaccaacg ttgcggcaca cgccaaagaa gtcaaaatag gtatggcgat tgatgatcta
     5341 cgtcttgaac gctggcaaaa agatcgagat atttttgtga aaaaggctga atctctcggt
     5401 gcgaaagtat ttgtacagtc tgcaaatggc aatggagaaa cacaaatgtc gcagattgaa
     5461 aacatgatta accggggtgt cgatgttctt gtcattattc catataacgg ccaggtatta
     5521 agtaacgttg taaaagaagc caaacaagaa ggtattaaag tattagctta cgaccgtatg
     5581 attaacgatg cggatatcga tttttatatt tctttcgata acgaaaaagt cggtgaactg
     5641 caggcaaaag ccctggtcga tattgttccg caaggtaatt acttcctgat gggcggctcg
     5701 ccggtagata acaacgccaa gctgttccgc gccggacaaa tgaaagtgtt aaaaccttac
     5761 gttgattccg gaaaaattaa agtcgttggt gaccaatggg ttgatggctg gttaccggaa
     5821 aacgcgctaa ccgccaataa taacaaaatt gatgctgtag ttgcctcaaa cgatgccacc
     5881 gcaggtgggg caattcaggc attaagcgcg caaggtttat cagggaaagt agcaatttcc
     5941 ggccaggatg cggatctcgc aggtattaaa cgtattgctg ccggtacgca aactatgacg
     6001 gtgtataaac ctattacatt gctggcaaat actgccgcag aaattgccgt tgaattgggc
     6061 aatggtcagg agccaaaagc agatacctca ctgaataatg gcctgaaaga tgtcccctcc
     6121 cgcctcctga caccgatcga tgtgaataaa aacaacatca aagatacggt aattaaagac
     6181 ggattccaca aagagagcga gctgtaagcg ttacgccccg gcgcggagcg ggggcgtgat
     6241 ttctctccat gccgcgtgaa tgaattggct taggtggagt cgttatgcct tatctacttg
     6301 aaatgaagaa cattaccaaa accttcggca gtgtgaaggc gattgataac gtcagcttgc
     6361 ggttgaatgc tggcgaaatc gtctcactct gtggggaaaa tgggtctggt aaatcaacgc
     6421 tgatgaaagt gctgtgtggt atttatcccc atggctccta cgaaggcgaa attatttttg
     6481 cgggagaaga gattcaggcg agtcacatcc gcgataccga acgcaaaggt atcgccatca
     6541 ttcaccagga attggccctg gtgaaagaat tgaccgtgct ggaaaatatc ttcctgggta
     6601 acgaaataac ccacaatggc attatggatt atgacctgat gacgctacgc tgtcagaagc
     6661 tgctcgcaca ggtcagttta tccatttcac ctgatacccg cgttggcgat ttagggcttg
     6721 ggcaacaaca actggttgaa attgccaagg cacttaataa acaggtgcgc ttgttaattc
     6781 tcgatgaacc gacagcctca ttaactgagc aggaaacgtc ggttttactg gatattattc
     6841 gcgatctaca acagcacggt atcgcctgta tttatatttc gcacaaactc aacgaagtca
     6901 aagcgatttc cgatacgatt tgcgttattc gcgacggtca gcacattggt acgcgtgatg
     6961 ctgccggaat gagtgaagac gatattatca ccatgatggt cgggcgagag ttaaccgcgc
     7021 tttaccctaa tgaaccacat accaccggag atgaaatatt acgtattgaa catctgacgg
     7081 catggcatcc ggttaatcgt catattaaac gagttaatga tgtctcgttt tccctgaaac
     7141 gtggcgaaat actgggtatt gccggactcg ttggtgccgg acgtaccgag accattcagt
     7201 gcctgtttgg cgtgtggccc ggacaatggg aaggaaaaat ttatattgat ggcaaacagg
     7261 tagatattcg taactgtcag caagccatcg cccaggggat tgcgatggta cccgaagaca
     7321 gaaagcgcga cggcatcgtt ccggtaatgg cggttggtaa aaatattacc ctcgccgcac
     7381 tcaataaatt taccggtggc attagccagc ttgatgacgc ggcagagcaa aaatgtattc
     7441 tggaatcaat ccagcaactc aaagttaaaa cgtcgtcccc cgatcttgct attggacgtt
     7501 tgagcggcgg caatcagcaa aaagcgatcc tcgcccgctg tctgttactc aacccgcgca
     7561 ttctcattct tgatgaacct accaggggta ttgatattgg cgcgaaatat gagatctaca
     7621 aattaattaa ccaactcgtc cagcagggta ttgccgttat tgtcatctct tccgaattac
     7681 ctgaagtgct cggccttagc gatcgtgtac tggtgatgca tgaagggaaa ctaaaagcca
     7741 acctgataaa tcataacctg actcaggagc aggtgatgga agccgcattg aggagcgaac
     7801 atcatgtcga aaagcaatcc gtctgaagtg aaattggccg taccgacatc cggtggcttt
     7861 tccgggctga aatcactgaa tttgcaggtc ttcgtgatga ttgcagctat catcgcaatc
     7921 atgctgttct ttacctggac caccgatggt gcctacttaa gcgcccgtaa cgtctccaac
     7981 ctgttacgcc agaccgcgat taccggcatc ctcgcggtag gaatggtgtt cgtcataatt
     8041 tctgctgaaa tcgacctttc cgtcggctca atgatggggc tattaggtgg cgtcgcggcg
     8101 atttgtgacg tctggttagg ctggcctttg ccacttacca tcattgtgac gttggttctg
     8161 ggactgcttc tcggtgcgtg gaacggatgg tgggtcgcgt accgtaaagt cccttcattt
     8221 attgtcaccc tcgcgggcat gttggcattt cgcggcatac tcattggcat caccaacggc
     8281 acgactgtat cccccaccag cgccgcgatg tcacaaattg ggcaaagcta tctccccgcc
     8341 agtaccggct tcatcattgg ccgcttggct taatggcttt tgttggttgg caatggcgcg
     8401 gaagaatgcg ccgtcaggct ttgggtttac agtctccggc ctctaccgca gtagtcggtc
     8461 gccaggcttt aaccgctatc atcgtattag gcgcaatctg gctgttgaat gattaccgtg
     8521 gcgttcccac tcctgttctg ctgctgacgt tgctgttact cggcggaatg tttatggcaa
     8581 cgcggacggc atttggacga cgcatttatg ccatcggcgg caatctggaa gcagcacgtc
     8641 tctccgggat taacgttgaa cgcaccaaac ttgccgtgtt cgcgattaac ggattaatgg
     8701 tagccatcgc cggattaatc cttagttctc gacttggcgc tggttcacct tctgcgggaa
     8761 atatcgccga actggacgct attgcagcat gcgtgattgg cggcaccagc ctggctggcg
     8821 gtgtgggaag cgttgccgga gcagtaatgg gggcatttat catggcttca ctggataacg
     8881 gcatgagtat gatggatgta ccgaccttct ggcagtatat cgttaaaggt gcgattctgt
     8941 tgctggcagt atggatggac tccgcaacca aacgccgttc ttgattttga taaaaatttt
     9001 ctcaaagccg gttacgtatt accggttttg agtttttgca tgattcagca ggaaaagaac
     9061 catgtttact aaacgtcacc gcatcacatt actgttcaat gccaataaag cctatgaccg
     9121 gcaggtagta gaaggcgtag gggaatattt acaggcgtca caatcagaat gggatatttt
     9181 cattgaagaa gatttccgcg cccgcattga taaaatcaag gactggttag gagatggcgt
     9241 cattgccgac ttcgacgaca aacaaatcga gcaagcgctg gctgatgtcg acgtccccat
     9301 tgttggggtt ggcggctcgt atcaccttgc agaaagttac ccacccgttc attacattgc
     9361 caccgataac tatgcgctgg ttgaaagcgc atttttgcat ttaaaagaga aaggcgttaa
     9421 ccgctttgct ttttatggtc ttccggaatc aagcggcaaa cgttgggcca ctgaacgcga
     9481 atatgcattt cgtcagcttg tcgccgaaga aaagtatcgc ggagtggttt atcaggggtt
     9541 agaaaccgcg ccagagaact ggcaacacgc gcaaaatcgg ctggcagact ggctacaaac
     9601 gctgccaccg caaaccggga ttattgccgt tactgacgcc cgggcgcggc atattctgca
     9661 agtatgtgaa catctacaca ttcccgtacc ggaaaaatta tgcgtgattg gcatcgacaa
     9721 cgaagaactg acccgctatc tgtcgcgtgt cgccctttct tcggtcgctc agggcgcgcg
     9781 gcaaatgggc tatcaggcgg caaaactgtt gcatcgatta ttagataaag aagaaatgcc
     9841 gctacagcga attttggtcc caccagttcg cgtcattgaa cggcgctcaa cagattatcg
     9901 ctcgctgacc gatcccgccg ttattcaggc catgcattac attcgtaatc acgcctgtaa
     9961 agggattaaa gtggatcagg tactggatgc ggtcgggatc tcgcgctcca atcttgagaa
    10021 gcgttttaaa gaagaggtgg gtgaaaccat ccatgccatg attcatgccg agaagctgga
    10081 gaaagcgcgc agtctgctga tttcaaccac cttgtcgatc aatgagatat cgcaaatgtg
    10141 cggttatcca tcgctgcaat atttctactc tgtttttaaa aaagcatatg acacaacgcc
    10201 aaaagagtat cgcgatgtaa atcgtgaggt catgttgtag cgatgatgag aattgtcggc
    10261 gtcacatcag ggaactcagc acagccacct gatgcgagca aaagccttat ccgaccgaca
    10321 aatcagataa ggctcaagga aatgcaatta catatgcgcc gcgattaacc gttggttatc
    10381 ctggtacatt gcgaacaggt agttattata actcttccct ttggtcgagt agcccttcag
    10441 cttgtgaatc atcgctgtgg cagtcacttc ctgatccgct ttacgcagct gcgcacgcga
    10501 tttacggaac gaagagtaag ccgggtgcgt attcaggtta gtgacatagg cgctcaccga
    10561 ttctttgaca gaactaaact gtgagtaccc tttcacttta cccggcgcat tggtacaacg
    10621 tcctttcatg catttcatgc cgaacagatt gttattgttg cgcgccagct tcgacgttcc
    10681 ccaaccgctt tctgctgcag ccatcgtcgc caccatactg gtagggataa tgtctacgcg
    10741 ttcaagcaag gtattccacg ggatttttcg cgtattacca gaccacttca ccttgtagcg
    10801 tttggcgatg tctttcagac gcgcacgctc agcaggtgac cattggccct gatactgttt
    10861 tgaaatcagc cagttacgtt ctgcagtaat ggctgcattt tggctggtaa tgtaaggcat
    10921 tacggtccgg agaaacgcct ttttccttgg tgttccggaa gggtattttc gcaaatcagg
    10981 aagtgaacta ctctttgcac tattgcgaga atactcttgt ttactgctta cctgtttatt
    11041 actagcttta gttaagtggg acttttgact cgctgttgtt gtgtgcgtct tcgctaacac
    11101 ctcactcgaa aacaccagag tgagtaacat aagaatcatc gccccatatc gtcgtatggg
    11161 agtcaaaatc atcaggtctc ctggtcggat ttaatcattc caacacctta tatttttcac
    11221 aaatttgaga gttgaatctc aaatcatatc aaaaatagct gtcaagagca ccccaaggaa
    11281 tagtccaaat ctgaaactat gtcacgagtt aacgattcag attggcgcta aatcgcagaa
    11341 aatgtggggt ttatcgcaaa attcagccgt tttttgcgcg cgatcgctca cccttgcttc
    11401 tcatcctgtg gacttaccgc tcagggatga gttttgtctg gcttatcgct ggcaaactgt
    11461 ctgaaatcgc agcaataagg actcatccac catgaaactc gcctcctgtt ttctgacact
    11521 ccttcctggc ttcgccgttg ccgccagctg gacttctccg gggttccctg cctttagcga
    11581 acagggaacg ggaacatttg tcagccacgc gcagttgccc aaaggtacgc gtccactcac
    11641 gctaaatttt gaccaacagt gctggcagcc tgcagatgcg ataaaactca atcagatgct
    11701 ttccctgcaa ccttgtagca acacgccgcc tcaatggcga ttgttcaggg acggcaaata
    11761 tacgctgcaa atagacaccc gctccggtac gccaacattg atgatttcca tccagaacgc
    11821 cgccgaaccg gtagcaaacc tggtccgtga atgcccgaaa tgggatggat taccgctcac
    11881 gctggatgtc agcgccactt tcccggaagg agccgccgta cgggattatt acagccagca
    11941 aattgcgata gtgaagaacg gtcaaataac gttacaaccc gctgctacca gcaacggttt
    12001 actcctgctg gaacgggcag aaactgacac atccgcccct ttcgactggc ataacgccac
    12061 ggtttacttt gtgctgacag atcgtttcga aaacggcgat cccagtaatg accagagtta
    12121 cggacgtcat aaagacggta tggcggaaat tggcactttt cacggcggcg atttacgcgg
    12181 cctgatcaac aaactggatt acctccagca gttgggcgtt aatgctttat ggataagcgc
    12241 cccatttgag caaattcacg gctgggtcgg cggcggtaca aaaggcgatt tcccgcatta
    12301 tgcctaccac ggttattaca cacaggactg gacgaatctt gatgccaata tgggcaacga
    12361 agccgatcta cggacgctgg ttgatagcgc acatcagcgc ggtattcgta ttctctttga
    12421 tgtcgtgatg aaccacaccg gctatgccac gctggcggat atgcaggagt atcagtttgg
    12481 cgcgttatat ctttctggtg acgaagtgaa aaaaacgctg ggtgaacgct ggagcgactg
    12541 gaaacctgcc gccgggcaaa cctggcatag ctttaacgat tacattaatt tcagcgacaa
    12601 aacaggctgg gataaatggt ggggaaaaaa ctggatcaga acggatatcg gcgattacga
    12661 caatcctgga ttcgacgatc tcactatgtc gctggccttt ttgccggata tcaaaaccga
    12721 atcaactacc gcttctggtc tgccggtgtt ctataaaaac aaaacggata ctcacgctaa
    12781 agtcatcgaa ggctttacac ctcgcgatta cttaacccac tggttaagtc agtgggtccg
    12841 cgactatggg attgatggtt ttcgggtcga taccgccaaa catgttgagt tgcccgcctg
    12901 gcagcaactg aaaaccgaag ccagctccgc gcttcgcgaa tggaaaaaaa ctaaccccga
    12961 caaagcatta gatgacaaac ctttctggat gaccggtgaa gcctggggcc acggcgtgat
    13021 gcaaagtgac tactatcgcc acggcttcga tgcgatgatc aatttcgatt atcaggagca
    13081 ggcggcgaaa gcagtcgatt gtctggcgca gatggatacg acctggcagc aaatggcgga
    13141 gaaattgcag ggtttcaacg tgttgagcta cctctcgtcg catgataccc gtctgttccg
    13201 tgaagggggc gacaaagcag cagagttatt actattagcg ccaggcgcgg tacaaatctt
    13261 ttatggcgat gaatcctcgc gtccgttcgg tcctacaggt tctgatccgc tgcaaggtac
    13321 acgttcggat atgaactggc aggatgttag cggtaaatct gccgccaacg tcgcgcactg
    13381 gcagaaaatc agccagttcc gcgcccgcca tcccgcaatt ggcgcgggca aacaaacgac
    13441 actttcgctg aagcagggct acggctttgt tcgtgagcat ggcgacgata aagtgctggt
    13501 catctgggct gggcaacagt gacttttccg gcttcccgtt catcagtacc tcgggaagcc
    13561 gccaaccagg ataaaatgtc agccctaatc agcgttgcag gataaagcac cgctcactct
    13621 tcaacagacc gatttgcacc ccagcaaatg tagcgttatt gttaccttcc ttgctacaga
    13681 gttcgacaga tatcccgcta tgacattctc cctttttggt gacaaattta cccgccactc
    13741 cggcattacg ctgctgatgg aagatctgaa cgacggttta cgcacgcctg gcgcgattat
    13801 gctcggcggc ggtaatccgg cgcagatccc ggaaatgcag gactacttcc agacgctact
    13861 gaccgacatg ctggaaagtg gcaaagcgac tgatgcactg tgtaactacg acggtccaca
    13921 ggggaaaacg gagctactca cactgcttgc cggaatgctg cgcgagaagt tgggttggga
    13981 tatcgaacca cagaatattg cactaacaaa cggcagccag agcgcgtttt tctacttatt
    14041 taacctgttt gccggacgcc gtgccgatgg tcgggtcaaa aaagtgctgt tcccgctggc
    14101 accggaatac attggctacg ctgacgccgg actggaagaa gatctgtttg tctctgcgcg
    14161 tccgaatatt gaactgctgc cggaaggcca gtttaaatac cacgtcgatt ttgagcatct
    14221 gcatattggc gaagaaaccg ggatgatttg cgtctcccgg ccgacgaatc caacaggcaa
    14281 tgtgattact gacgaagagt tgctgaagct tgacgcgctg gcgaatcaac acggcattcc
    14341 gctggtgatt gataacgctt atggcgtccc gttcccgggt atcatcttca gtgaagcgcg
    14401 cccgctatgg aatccgaata tcgtgctgtg catgagtctt tccaagctgg ggctgcctgg
    14461 ctcccgctgc ggcattatca tcgccaatga aaaaatcatc actgccatca ccaatatgaa
    14521 cggcattatc agcctggcac ctagcggtat tggtccggcg atgatgtgtg aaatgattaa
    14581 gcgtaacgat ctgctgcgcc tgtctgaaac agtcatcaaa ccgttttact accagcgtgt
    14641 tcaggaaact atcgccatca ttcgccgcta tttaccggaa aatcgctgcc tgattcataa
    14701 accggaagga gccattttcc tctggctatg gtttaaggat ttgcccatta cgaccgagca
    14761 gctctatcag cgcctgaaag cacgcggcgt gctgatggtg ccggggcaca acgtcttccc
    14821 gggactggat aaaccgtggc cgcatacgca tcaatgtatg cgcatgaact acgtaccaga
    14881 gccggagaaa attgaggcgg gggtgaagat tctggcggaa gagatagaaa gagcctgggc
    14941 tgaaagtcac taaaaattgc ctgatgcgct acgcttatca ggcctacatg atttctgcaa
    15001 tatattgaat ttggaagaat ttgtaggccg gataaggcgt ttacgccgca tctggcataa
    15061 acaaagcgca ctattccggc gttgagaaac gccggaaaac gtttcaaaca ggctgctgcc
    15121 gtagccgatg ccgctgcact ttctcgacat ccatgcactg caacgccttt gtcgggcagg
    15181 cttcaacaca ggccggcccc gtctcccgat gccagcacag atcgcactta atcgccctcg
    15241 cctttttgcg cgaagaaacg acctccatcg caccaaacgg gcaagccagc atacagcttt
    15301 tacagccaat gcaacgtgtt tgttcaacga aaatatgccc atgttcgcgg cttatcgcgt
    15361 caacagggca gacattcgcg cacggtgcat cttcacactg atgacaggct actgccgtgg
    15421 tccagctgtg gtctttaatg acacgaatac gggaaataaa ctcgtctggt gacaacgcag
    15481 cgcaatcctg attctcctga tgcgacactg cgcaagccac ttcacaggta cggcaaccga
    15541 tacatttcgt cgcatccgca ataataaacc ggttcatgat cactcctttg cactaaaaca
    15601 gcagagtgcc agagagcgcg tccctactgc tttgatccaa cgaaggaaat gttaaagttt
    15661 tggcacttgt ccaaagcgtt atgtgatcgc gcccaggtca tccctgacag taaatcccag
    15721 ttcattagaa atagcctgcg cggtttcacg cagtggtttc aggagatttt tctctcccac
    15781 ctgtttcaga cgtgatgtcg aaagcgaaat cgacacggcg tacggcaccc gcccatgaat
    15841 atcaaacacc ggaacagcaa tacaggagac gccgagttcg ttttcttctc tgtccatcgc
    15901 cgctccgctt tcacgaatgt gcgccagttc gtcgaacatc gcgggcagct cggtaatggt
    15961 attgcgggtt aacggctgga tctcatgctg atggttttcc cagtatgact tcacgtagtc
    16021 cgggtgacca aacgccatgt agatcttgcc cattgcggaa cagtagagcg gcatatgctg
    16081 gccaatatag gcacgggttc gcagcatccc ggttgtgggt tccagcttat aaatcaaaat
    16141 agcgtgatcg tcttcgcggc tggagaagtt aatggtttca ccagtggcga tgttcagtgc
    16201 ctcaagatgc ggagcggcga tatgaatgat attcagcgaa gacagcgcct tctgcccgac
    16261 ggcaataaat ttggtagtca ggcggtaact ccctgcggcg ggcgcggtgg tcacatagcc
    16321 gcaggactgt aatccctgca ataagcgatg gacggtactc ttatttaaac cagccagctc
    16381 cgaaagatgc gccaacggac aaccgtttgg atagttgctc aaaatctcaa tcagcatcaa
    16441 cccgcgaaac agactctggc ttccggctgg acgctctttt tcctgcgcca tctcgttctc
    16501 tttttttccc atcacttctt tccccatttt gtcgcgtcct gatggtagcg caaagtgtgc
    16561 cgtagttcac gatctcgaca gataatttat aaccacttga tttttatgtc ttttgaaatt
    16621 catcaatcag attgctttgt taaaaagtga tcgatatatt tgaaatcaag tttcgcatat
    16681 tgaaatttta agccaaaaaa gcgatcaaaa aaacaaggaa gcctgggatg aaagtgacat
    16741 ttgagcagtt aaaagcagcc tttaatcggg ccttaatttc acgcggcgtt gacagcgaaa
    16801 cggctgacgc ctgtgcagag atgttcgccc gcaccaccga atccggcgtt tattctcacg
    16861 gcgttaatcg tttccctcgt ttcattcaac aactggaaaa cggcgatatc attcctgatg
    16921 cccaacccaa acgtataacc agcctcggcg caattgaaca gtgggatgcc cagcgttcga
    16981 tcggcaacct gacggcgaaa aagatgatgg atcgcgccat tgaactggct gccgatcacg
    17041 gtattggtct ggtggcactt cgtaatgcca accactggat gcgcggcggc agctacggct
    17101 ggcaggcggc ggaaaaaggc tatattggca tttgctggac caactccatc gccgtaatgc
    17161 cgccgtgggg cgcaaaagag tgtcgcattg gcactaaccc gctgatcgtc gccattcctt
    17221 ccacgccgat caccatggtc gatatgtcga tgtcgatgtt ctcttacggc atgttagaag
    17281 ttaaccgcct ggcgggccgt cagctcccgg tcgatggtgg ctttgatgat gagggcaatt
    17341 tgaccaaaga acctggcgtt atcgagaaga atcgccgcat tttgccgatg ggctactgga
    17401 aaggttctgg catgtcgatt gtgctggata tgatcgctac tctcctttcc gacggcgcat
    17461 cggttgccga agtcacccag gacaacagcg acgaatacgg catttcacaa atttttattg
    17521 ccattgaagt ggacaagctt atcgacggtc ccacccgcga tgccaagctg caacgcatca
    17581 tggattacgt tactaccgct gaacgcgctg acgaaaacca ggccatccgc ttacccggcc
    17641 acgaatttac taccctgctg gccgaaaacc gccgtaacgg catcactgtt gatgacagcg
    17701 tgtgggccaa aatccaggcg ttatgaggag ataagtcatg atttttggac atatcgcgca
    17761 gcccaatccg tgccgtttgc ccgccgccat tgaaaaggcg ctcgattttc tgcgcgctac
    17821 caacttcaac gtcctggagc cgggcgttgt cgaaatcgac ggcaagaata tttatgcgca
    17881 aattatcgat ttaaccacac gcgaagcggt ggaaaaccgt ccggaagtgc atcgtcggta
    17941 tatcgatatt cagtttctgg cgtggggtca agagaaaatc ggcattgcta ttgatacagg
    18001 aaataataaa gtcagcgaat cactattaga gcagcgcgat attatttttt atcatgtcag
    18061 tgaacatgaa tcatttatag aaatgatacc gggcagctac gctattttct tcccgcagga
    18121 tgttcaccga ccaggttgta ttctgcaaac aggcctctga gatacgaaaa attgtggtta
    18181 aagtcgcatt aacagcgctg aattaatcaa ataatcgtct acgccagaac gactgggtaa
    18241 tgttattgct ctaactatat taataattta ggttgctgca catgcaactt gaattatgac
    18301 agacatagcc tcaaggaata gctatgaaaa aaatacttga agtaatactg gcgattaatc
    18361 tcgccgtact ttcctgtatt gtgtttataa acattatttt aagatatggt tttcagacaa
    18421 gcattttatc tgtagatgaa ttgtcacgtt atttatttgt ctggttaaca tttattggcg
    18481 cgattgtggc ttttatggat aacgcccacg ttcaggtcac ctttctggtg gagaaactct
    18541 cccccgcatg gcaacgacga gtcgctctgg ttacccattc cttaatctta tttatttgtg
    18601 gcgcactggc ctggggcgca acactaaaaa caattcagga ctggagcgat tattcaccga
    18661 tcctcggttt gcccatcggc ctgatgtatg ccgcttgtct gcccaccagc ctcgttatcg
    18721 cattctttga actgcgtcat ttatatcaac tcatcacgcg tagcaattct ctaacgtcgc
    18781 caccgcaagg agcttaatca tggctgtgct gatttttctg ggctgtctgt tgggtggtat
    18841 tgctatcggt ttgcctattg cctgggcact gttgttgtgc ggggcggcgt taatgttctg
    18901 gctggacatg tttgatgtcc agatcatggc acaaacgctg gtgaacggag ccgatagctt
    18961 ctccctgctg gcgattccgt tctttgtgct ggcgggtgaa atcatgaatg cgggcggctt
    19021 gtcaaaacgc attgttgacc tgccgatgaa actggtgggg cataaaccag gcgggctggg
    19081 ctacgtcggc gtgctggcag ctatgattat ggcgagcctt tctggttctg ccgttgcgga
    19141 taccgccgcc gttgccgctc tactggtgcc gatgatgcgc agcgccaact acccggtcaa
    19201 ccgggcggcg gggctgattg cctctggcgg cattatcgcg ccaattattc ccccttccat
    19261 tccgtttatt atcttcggcg tttccagcgg attatccatc agtaagctgt ttatggcggg
    19321 cattgcccct gacatgatga tgggcgcaac gctgatgctt acctggtggt ggcaggccag
    19381 tcgccttaat ttaccccgcc agcaaaaagc aacgatgcag gaaatctggc actcttttgt
    19441 ctccggtatc tgggctctgt ttcttccagt catcattatt ggcgggtttc gctccggtct
    19501 gtttacccct accgaagccg gggccgttgc tgctttctat gcgctgtttg tcgccacagt
    19561 tatttaccgt gaaatgacct tcgccacact ttggcatgta ctcattggcg cggcgaaaac
    19621 cacctcagtg gttatgtttc tggtggcctc ggcacaagtt tccacctggc tgattaccat
    19681 tgctgaactg ccgatgatgg tttctgattt actgcaaccg ttggtcgatt caccgcgtct
    19741 gctgtttatc gtcattatgg tggctatcct gattgtcggc at
//
LOCUS       DADKRT010000071        19488 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.072, whole genome shotgun sequence.
ACCESSION   DADKRT010000071 DADKRT010000000
VERSION     DADKRT010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19488
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.072"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1230
                     /locus_tag="JQ356_002101"
     CDS             <1..1230
                     /locus_tag="JQ356_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HAY4622193.1"
                     /translation="FFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSS
                     LESAWKYIIICTVDVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLML
                     LAFVFVLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIIC
                     QAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVALGIGGPL
                     GIFAALLHTLNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALA
                     LAGMPPFNIFLSEFMTVTAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQA
                     VNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWH
                     DFLPSGTASVSEKHSER"
     gene            1220..2935
                     /gene="hyfG"
                     /locus_tag="JQ356_002102"
     CDS             1220..2935
                     /gene="hyfG"
                     /locus_tag="JQ356_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfG"
                     /protein_id="HAY4622194.1"
                     /translation="MNVNSSSNSGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL
                     LPDVVHYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR
                     EFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLHKDAMDYRL
                     RPEPTTDSETYAFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV
                     HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI
                     LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGG
                     VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDYSPV
                     GPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFA
                     LDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANW
                     PVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRN
                     RSPLK"
     gene            2945..3484
                     /gene="hyfH"
                     /locus_tag="JQ356_002103"
     CDS             2945..3484
                     /gene="hyfH"
                     /locus_tag="JQ356_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit H"
                     /protein_id="HAY4622195.1"
                     /translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG
                     ACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA
                     DLYTRATFHLQRCSRCERPFAPQKTVALAAELLAQQQNAPQNREMLRAQASVCPECKQ
                     RATLINDDTDVPLVAKEQL"
     gene            3481..4239
                     /gene="hyfI"
                     /locus_tag="JQ356_002104"
     CDS             3481..4239
                     /gene="hyfI"
                     /locus_tag="JQ356_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfI"
                     /protein_id="HAY4622196.1"
                     /translation="MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGC
                     NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH
                     KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ
                     QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD
                     PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD"
     gene            4232..4645
                     /gene="hyfJ"
                     /locus_tag="JQ356_002105"
     CDS             4232..4645
                     /gene="hyfJ"
                     /locus_tag="JQ356_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 assembly chaperone HyfJ"
                     /protein_id="HAY4622197.1"
                     /translation="MTEECGEIVFWTLRKKFVASSDEMPEHRSQVMYYSLAIGHHVGV
                     IDCLNVAFRCPLTENEDWLAQVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFALLA
                     DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA"
     gene            4675..6687
                     /locus_tag="JQ356_002106"
                     /pseudo
     CDS             4675..6687
                     /locus_tag="JQ356_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416986.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
     gene            6709..7415
                     /locus_tag="JQ356_002107"
                     /pseudo
     CDS             6709..7415
                     /locus_tag="JQ356_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001698835.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
     gene            7366..7554
                     /locus_tag="JQ356_002108"
     CDS             7366..7554
                     /locus_tag="JQ356_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000886534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
                     /protein_id="HAY4622198.1"
                     /translation="MPFAISPPPFWQLAHSSADNFPALTVSHFITANLLPVMLGNIIG
                     GAVLVSMCYRAIYLRQES"
     gene            complement(7592..8653)
                     /locus_tag="JQ356_002109"
     CDS             complement(7592..8653)
                     /locus_tag="JQ356_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HAY4622199.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
                     AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
                     TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
                     EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVIHAWPDGQIAQE"
     gene            8866..10329
                     /gene="bepA"
                     /locus_tag="JQ356_002110"
     CDS             8866..10329
                     /gene="bepA"
                     /locus_tag="JQ356_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HAY4622200.1"
                     /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADNADTLPDMGTSAGSTL
                     SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHLTQRHLARAMEDQQRSTPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
                     PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
                     AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP
                     LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
                     QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
                     SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
     gene            10350..10709
                     /gene="arsC"
                     /locus_tag="JQ356_002111"
     CDS             10350..10709
                     /gene="arsC"
                     /locus_tag="JQ356_002111"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311384.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HAY4622201.1"
                     /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
                     LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN
                     GKARIGRPPEQVLEIVG"
     gene            complement(10847..11593)
                     /gene="hda"
                     /locus_tag="JQ356_002112"
     CDS             complement(10847..11593)
                     /gene="hda"
                     /locus_tag="JQ356_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HAY4622202.1"
                     /translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
                     LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
                     EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
                     GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
                     LFMTLDQLDRASITAQRKLTIPFVKEILKL"
     gene            complement(11643..12932)
                     /gene="uraA"
                     /locus_tag="JQ356_002113"
     CDS             complement(11643..12932)
                     /gene="uraA"
                     /locus_tag="JQ356_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HAY4622203.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII
                     ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
                     YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
                     SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
                     GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
                     ALATIVGIGLSLIFKLISVLRPEEVVLDAEEADITDK"
     gene            complement(13018..13644)
                     /gene="upp"
                     /locus_tag="JQ356_002114"
     CDS             complement(13018..13644)
                     /gene="upp"
                     /locus_tag="JQ356_002114"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HAY4622204.1"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            13968..15005
                     /gene="purM"
                     /locus_tag="JQ356_002115"
     CDS             13968..15005
                     /gene="purM"
                     /locus_tag="JQ356_002115"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HAY4622205.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL
                     ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW
                     PEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            15005..15643
                     /gene="purN"
                     /locus_tag="JQ356_002116"
     CDS             15005..15643
                     /gene="purN"
                     /locus_tag="JQ356_002116"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HAY4622206.1"
                     /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
                     RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
                     TEDDVTARVQTQEHAIYPLVISWFADGRLKIHENAAWLDGQRLPPQGYAADE"
     gene            15815..17881
                     /gene="ppk1"
                     /locus_tag="JQ356_002117"
     CDS             15815..17881
                     /gene="ppk1"
                     /locus_tag="JQ356_002117"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HAY4622207.1"
                     /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
                     IIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
                     CSLIPNPEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
                     ATPLLDPHLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
                     SLEQPE"
     gene            17886..19427
                     /gene="ppx"
                     /locus_tag="JQ356_002118"
     CDS             17886..19427
                     /gene="ppx"
                     /locus_tag="JQ356_002118"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HAY4622208.1"
                     /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
                     KRVEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
                     TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
                     RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS
                     DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
                     PEIAA"
BASE COUNT         4702 a         5094 c         5094 g         4598 t
ORIGIN      
        1 ttcttccatc tgtttttgtt caccatgctg ctggttgtta ccagcaataa cctgattgtg
       61 atgtgggcgg cgatcgaagc caccacctta agctcggcgt ttctggtagg catttacggt
      121 cagcgttcat cgctggaatc agcatggaag tacatcatta tttgtactgt tgatgtcgct
      181 tttggtctgt tcggtaccgt gctggtatac gccaacgccg ccagcgttat gccgcaggca
      241 gaaatggcga tattctggag cgaggttctt aagcaatcgt ccttgcttga cccaacatta
      301 atgctgttgg cctttgtgtt tgtgctaatt ggctttggta ccaaaaccgg gctatttccc
      361 atgcacgcct ggctgccgga tgctcacagt gaagcgccga gtccggtcag cgccctgctc
      421 tccgccgtat tgctgaactg cgcgctgttg gtgctgattc gctattacat cattatttgc
      481 caagccatcg gcagcgattt ccccaaccgg ttgttgctca tcttcggcat gttgtcggtt
      541 gccgtggcgg catttttcat tctggtacag cgggacatta agcgtctgct ggcgtactcc
      601 agcgtggaga acatggggct ggtcgcggtg gcgctaggca ttggcgggcc gctgggaatt
      661 tttgccgcgc tgctgcacac cttaaaccac agtctggcaa aaacgctgct gttctgcggt
      721 tccggcaatg tactgctcaa gtacggcacg cgcgatctca acgtcgtctg tgggatgctc
      781 aaaatcatgc catttaccgc cgtgctgttt ggcggcggtg cgctggcgct ggcagggatg
      841 ccgcccttca acatttttct tagcgaattt atgaccgtta ccgcaggact ggcacgtaat
      901 cacctgctga ttatcgtcct gctgttattg ctgttaacgc tggtgctggc gggcctagta
      961 cggatggctg cgcgggtgtt aatggcgaaa ccgccgcagg ccgttaaccg gggtgatctc
     1021 ggctggttga ccacctcgcc aatggtgatt ctgctggtca tgatgctggc gatgggaacg
     1081 catattccac aacctgtcat caggatcctg gcgggcgctt ccactatagt cctctcaggg
     1141 acgcacgacc tgcctgcaca acgtagcacc tggcatgatt ttttgccttc aggcaccgca
     1201 tctgtttcgg agaaacacag tgaacgttaa ttcatcgtca aatagtggcg aagcgattct
     1261 cgccgccctg aaaacgcagt tccccggcgc ggtactggat gaagagcgac aaacgcctga
     1321 acaggtcacc attacggtga aaatcaatct gctgcctgac gttgtacatt atctttatta
     1381 tcaacatgat ggctggcttc cagtcctgtt tggcaacgac gagcggacac ttaacggtca
     1441 ttacgcggtt tattatgccc tttcaatgga aggggccgaa aaatgctgga tcgtggtgaa
     1501 ggcactggtc gatgccgaca gtcgggagtt tccgtcagtc acaccgcgcg tccctgccgc
     1561 ggtctggggc gagcgagaaa ttcgcgatat gtacgggctg attccggttg gcctgccgga
     1621 tcagcgtcgc ctggtgttgc ccgatgactg gccggaagat atgcatccgc tgcacaaaga
     1681 tgcgatggat tatcgactgc gccctgaacc gacgacagat tccgaaacgt atgcgtttat
     1741 caatgagggc aacagcgatg cgcgggtgat ccctgtcggc ccgctgcata tcacctccga
     1801 tgaaccgggt cacttccgct tgtttgtgga tggcgagcaa attgtcgatg ctgattaccg
     1861 cctgttttat gtccatcgag gcatggagaa actggcagaa acgcggatgg gctacaacga
     1921 agtgaccttc ttatcggacc gcgtgtgtgg gatttgcggt tttgcccaca gtgtggccta
     1981 taccaactcg gttgaaaatg cactggggat tgaggtgccg caacgagcgc ataccattcg
     2041 ctcgattctg ctggaagtcg aacggctaca cagtcatttg ctcaaccttg gcctctcctg
     2101 ccattttgtt ggttttgata ccggctttat gcaatttttc cgcgtgcggg aaaagtcgat
     2161 gacgatggcg gaattgctga ccgggtcgcg taaaacctac ggtctgaatc tgattggtgg
     2221 tgttcgccgc gatattctca aagagcaacg tctgcaaacg ctgaaactgg tgcgcgagat
     2281 gcgcgccgac gtgtcggagc tggtagagat gctgcttgct acgccgaata tggaacaacg
     2341 cactcagggc attggcattc tcgaccgaca aatcgcccgt gattatagcc ctgtagggcc
     2401 gctgatccgc ggcagtggtt ttgcccgtga tttgcgcttt gatcacccct acgccgacta
     2461 cggcaatatt ccaaaaacac tgtttacctt caccggcggc gatgttttct cccgcgtgat
     2521 ggtccgtgtc aaagagacgt ttgattcgct ggcaatgctg gaatttgccc tcgacaacat
     2581 gccggatacc ccactgctga ccgaaggctt tagctataaa cctcacgcat tcgcgctggg
     2641 ctttgttgaa gcgccacgcg gtgaagacgt gcactggagc atgctcggtg ataaccaaaa
     2701 attgttccgc tggcgctgcc gtgccgccac ctacgccaac tggccggtgt tgcgttacat
     2761 gctgcgcggc aataccgttt ctgacgcacc gctgattatc ggtagccttg atccctgcta
     2821 ctcctgtacc gaccgtgtga cgctggtaga tgtgcgcaag cgccagtcaa aaaccgtgcc
     2881 gtataaagag atcgaacgct acggcattga tcgtaaccgt tcgccgctga agtaaggaca
     2941 gaagatgctg aagttactga aaactattat gcgcgccgga accgcgacgg tgaaatatcc
     3001 cttcgcgcca ctggaggtca gcccaggctt tcgcgggaaa ccggacctga tgcccagcca
     3061 atgtattgcc tgcggcgcct gtgcttgtcc ggcaaatgcg ctgactatcc agaccgacga
     3121 ccagcaaaat tcgcgcacct ggcagctcta tctggggcgt tgtatttact gcggacgttg
     3181 tgaagaagtg tgcccgacca gagccatcca gcttaccaat aactttgaac tgaccgtcac
     3241 caataaagcc gatctctata cccgcgcgac gttccatcta caacgttgca gccgttgcga
     3301 acgcccgttt gccccgcaaa aaaccgtcgc actggctgct gaattgttgg cacagcaaca
     3361 aaatgcgcca caaaaccgcg aaatgttgcg ggcgcaagcg agcgtctgcc cggagtgcaa
     3421 acaacgcgcg acgctgatca acgacgatac agatgtaccg ctggtggcta aggagcagct
     3481 atgagtccag tgcttacaca acatgtcagc cagcccatca cgctggatga gcaaacgcaa
     3541 aagatgaagc ggcatttgct acaggatatc cgtcgctcag cctacgttta tcgcgtcgat
     3601 tgcggcggct gcaacgcctg tgaaatcgaa atttttgctg ccatcacccc cgtattcgac
     3661 gcagaacgtt ttggcattaa ggttgtttca tcaccgcgtc acgccgatat tttgttattt
     3721 actggcgcag tcacccgggc gatgcgtatg cctgcacttc gggcgtatga gtctgccccc
     3781 gatcataaaa tctgtgtttc ctacggcgcg tgcggtgtcg gcggcggtat tttccacgat
     3841 ctctacagcg tctggggcgg cagcgacacc attgtcccca ttgatgtttg gatccccggc
     3901 tgcccgccaa caccggccgc caccattcac ggtttcgccg tggcgctcgg tttgctgcaa
     3961 cagaagattc acgctgtgga ttatcgcgat cccaccgggg tgactatgca accgttgtgg
     4021 ccacagatcc cgccatcaca gcgtatcgcc attgagcgag aagcgcggcg gctggcgggc
     4081 tatcgtcagg ggcgagaaat ttgcgatcgg ctcctgcgcc atttaagcga cgatcctacc
     4141 ggaaatcggg ttaacacctg gttgcgcgat gccgacgatc cacgtctcaa tagtatcgtt
     4201 cagcaactct ttcgcgtact ccgggggtta catgactgaa gagtgcgggg aaattgtttt
     4261 ctggacgctg cgaaaaaagt ttgtcgccag tagcgacgag atgccggaac accgctctca
     4321 ggtaatgtat tactcgctgg ctatcggcca tcacgttggc gtgattgatt gtctgaatgt
     4381 cgccttccgc tgcccactga cggaaaacga agattggctt gcacaggtcg aagaggagca
     4441 agcccgacgt aagatgctgg gggtgatgac ctttggtgag attgttattg acgccagcca
     4501 caccgccctg ttgacccggg cattcgcgct actggcagat gacgcgacgt ctgtgtggca
     4561 ggcgcgtagc attcaattca ttcatctgtt ggatgaaatt gtgcaggaac cggccatcta
     4621 tctgatggcc agaaaaattg cgtgagaagg atttctcatt aataaggact gttgatggct
     4681 atgtcagacg aggcgatgtt tgccccgcca caaggaataa caattgaagc ggtaaacgga
     4741 atgctcgcgg agcggttagc acagaaacac ggtaaggcgt ctttattacg cgccttcatc
     4801 ccgatgccgc cgccgttcag cccggtacaa cttattgaac tgcatgttat caaaagcaac
     4861 ttctattacc gctaccatga tgatggcagc gatgtgacgg caacaacaga gtatcagggc
     4921 gagatggtcg attattcgcg tcacgccgtc cttctcggca gtagtggaat ggcggagcta
     4981 cgctttattc gtacccacgg cagccgtttt actccctagg attgcacact gtttaactgg
     5041 ctggcacgca ttatcactcc ggttctgcaa tcatggctca atgatgaaga acaacaggtg
     5101 gcgctgcgtt tgctggagaa agatcgcgat catcatcggg tactggttga tattactaat
     5161 gcagtgctgt cacatcttga tctcgacgat ctgatcgctg acgtcgctcg tgagatccat
     5221 cattttttcg gtctggcttc agtcagtatg gtactgggcg atcatcgaaa gaacgagaag
     5281 tttagcctgt ggtgcagcga tctttctgcc tcacattgtg cgtgtctgcc acgcaatatg
     5341 cctggcgaca gtgtattgct gacacaaacg ctacaaaccc gacaaccgac cttgacgcac
     5401 cgtgcagacg atctgtttct ctggcaacgc gacccgttat tactcttact tgcatctaac
     5461 ggctgcgaat ctgcgctcct tataccgctt acctttggca accatacacc gggtgcattg
     5521 ttgctggcgc atacctcttc cactctcttt agtgaggaaa actgccagct actacaacac
     5581 atagccgatc gcatcgctat tgccgttggc aatgccgatg cctggcgtag catgaccgat
     5641 ttgcaggaaa gtttgcagca agaaaactac cagcttagcg agcagctcct ttcgaatctg
     5701 ggcatcggtg acattatcta tcaaagccag gcaatggaag acctgctcca gcaggtagat
     5761 attgtagcga agagcgacag tacggtgttg atttgtggtg aaaccggaac cggcaaagag
     5821 gtgatcgcca gagcgctcca tcaacttagc acgcgacgcg acaaaccgct ggtcaaaatc
     5881 aactgcgctg ccatccccgc cagtcttctg gaaagtgagt tattcggtca tgacaaaggg
     5941 gcgtttactg gtgcgattaa tacacatcgt ggtcgttttg aaattgccga tggcggcacg
     6001 ttgtttctcg atgaaattgg cgatctgccg ttagaacttc agcctaaact gctgcgcgta
     6061 ttgcaggaac gggagattga gcgtctcggc gggagtagaa cgatcccggt gaatgtcaga
     6121 gtcattgccg ccaccaaccg tgatttgtgg caaatggttg aagatcgcca gtttcgcagc
     6181 aatctctttt atcgcctgaa tgtcttccca ttggaattgc cgccgctacg cgaccgtccg
     6241 gaagatatcc ctcttttagc aaaacatttc acgcaaaaaa tggcgcgcca tatgaatcgc
     6301 gcaattgacg ccatcccgac cgaggcgcta cgccagttga tgtcgtggga ctggccgggc
     6361 aacgtgcacg agctggaaaa cgtgattgag cgagcggtac tgctgactcg cggtaacagt
     6421 ctgaatttac atcttaatgt ccgacaaagc cgtttactgc cgacgctaaa tgaagattca
     6481 gcgcttcgca gttcaatggc gcagttgctg cacccgacga cgccagagaa tgacgaagaa
     6541 gaacgtcagc gcattgttca ggtattgcga gaaaccaatg gcattgttgc cgggccccgt
     6601 ggcgcggcga cacgattagg gatgaagcgc accacgctgc tgtcacgaat gcagcgtctg
     6661 gggatctcgg ttcgcgaggt gttgtaatct gcttttgcag gagtatgcat gagaaacaaa
     6721 ctctctttcg acttgcagtt gagcgccaga aaagcggcaa tcgctgaacg gattgccgtc
     6781 cataaaattg cccgcagtaa agtgtcggtc tttttaatgg cgatgtccgc tggcgtgttt
     6841 atggcgatcg gatttacttt ttacctttcc gttatcgccg atgccccgtc ttcacaggca
     6901 ttaacccatc tggtgggcgg cctttgcttt acactcggct ttattttgct ggcggtttgc
     6961 ggcacagcct gttcacctcg tcggtaatga cggtgatagc aaaaagtcgg ggcgttatta
     7021 gttggcgaac ttggctgatt aacgcacttc tggtggcctg tggtaatctg gcaggtattg
     7081 cctgtttcag tttgttaatc tggttttccg ggctggtgat gagtgaaaac gcgatgtggg
     7141 gagtcgcggt tttacactgc gccgagggca aaatgcatca tacatttact gaatctgtca
     7201 gcctcggcat tatgtgcaat ctgatggttt gcctggcgct gtggatgagt tattgcgggc
     7261 gttcgttatg cgacaaaatc gtcgccatga ttttgcccat caccctgttt gtcgccagtg
     7321 gctttgagca ctgtatcgcc aatttgtttg tgattccgtt cgccattgcc attcgccatt
     7381 tcgccccccc ccttctggca actggcgcac agtagcgcag acaattttcc ggcactgacg
     7441 gtcagccatt ttattaccgc caatctgctc ccggtgatgc tgggtaatat tatcggcggt
     7501 gcagtgctgg tgagtatgtg ttatcgggct atttatttac gtcaggaatc ctgaaaaatc
     7561 agcccggcga aacagttcgt cgggctgaag attattcttg cgcgatttgc ccatcgggcc
     7621 aggcgtggat cacggctttg atcagcgtcg ccaatggaat ggcgaagaat acgccccaga
     7681 atccccacaa accaccgaag atcaccaccg ataaaataat caccagcgga tgcaggttaa
     7741 ccgcttcgga gaacaacacc ggtactagca ggttgccgtc cagcgcctga ataatcagat
     7801 acaccgcgaa gcagctccag aattccgtgc ctgcgccaaa ctggaatagc gccacgccaa
     7861 ccaccggaat ggtcaccaca aatgcgccaa tgtacggaat aagaaccgag aagccgacca
     7921 gcaccgccag cagcagcgaa tagttcagcc caaagagcaa gaaccccagc caggtggcga
     7981 tccccaccac gatcatctcc agcactttgc cgcggatata gttggtgatt tgttgattca
     8041 tctccttcca cacctgtcct gccagtccac ggttgcgcgg cagcacccga cgaacggcgt
     8101 tcagcatctg ctctttgtct ttcagcagga agaagaccat caatggcacc agcaccagat
     8161 agacggcaat ggtcagcaaa ccgaccagcg aggcgaggga aattttcacc accgaatcgc
     8221 ccatggtcag catccgactg cgcatatttt cggccattgc atcaataatg cccgcgtcca
     8281 ttaacgccgg atagcggcgc ggcaacgtgg cggcaaagtc agaaagctta ttgagcatcc
     8341 ccggcatatc gcggattaag tagatgccct gttgccaggc gataggcagt accacgaacg
     8401 ccatcagtag caatataccg acaaaaacca ccaatacaat cgacgtcgcc cagcggcggg
     8461 agcagccaat agattgcagg cgcacggttg gccattccag caaataggcc agcacaatag
     8521 ccaccagcaa cggagcaagc aggccactaa agaaaaagat aatgccaaat ccggcaacta
     8581 aaataaccag caaggcaatc gcttccgggt cgctaaaacg gcggcgatac cattgcatca
     8641 acatttcgag cataaaaacc ttccctgaac ctcaagagcg ggattgcgat ccgcaattgt
     8701 atcgaaatgt cacaaaaaag acttcgcttt ttatgacgga ttcaggaaac tgaaaagtca
     8761 tttgagtggg ctaatcttcg ccgttacact caaaggcggc gcggtgggaa cgatatttca
     8821 cagtatcggt caaatgacta tcttcagaaa tacaggatag aggttatgtt caggcagttg
     8881 aaaaaaaacc tggttgcaac cctcattgct gctatgacca ttggtcaggt agccccggcg
     8941 tttgccgaca acgcagacac cttgccggat atgggaacct ccgcaggaag cacgctttcc
     9001 attggtcagg aaatgcagat gggcgactat tatgtccgcc agctacgcgg cagcgcgccg
     9061 ttaattaatg acccgctgtt aacgcaatat attaattcgc tggggatgcg tctggtttcg
     9121 catgccaatt cggttaagac accgtttcat ttttttctaa tcaacaacga cgaaattaac
     9181 gcctttgctt tctttggcgg caacgtggtg ctgcactctg ccctgttccg ttattccgat
     9241 aacgaaagtc aactggcttc agttatggcg cacgaaatct cccacctcac ccaacgtcac
     9301 ctggcgcgag cgatggaaga tcagcagcgc agcacgccgc tgacctgggt cggcgcgtta
     9361 ggttctattt tactggcgat ggccagtccg caggcgggga tggcggcgct gaccggtaca
     9421 ctggcgggaa cgcgtcaggg gatgatcagt ttcacccagc aaaatgaaca ggaagcggac
     9481 cgcattggta ttcaggtgct gcaacgctcg ggattcgatc cgcaggcgat gccaaccttc
     9541 ctcgaaaaat tactcgatca ggcgcgttac tcctcgcgcc cgccggaaat tttattgact
     9601 cacccgttgc cggaaagtcg tctggcagat gcccgcaacc gtgctaatca gatgcgaccg
     9661 atggtggtgc agtcgtcgga agatttctat ctggcgaaag cgcgcacact ggggatgtat
     9721 aattccggac gtaaccagct caccagtgat ttgctggatg aatgggcgaa aggaaacgtt
     9781 cgtcagcaac gagcggcgca atatggtcgt gctttacagg cgatggaagc caataaatac
     9841 gacgaggcgc gtaaaacgct gcaaccgtta ctggcggcag aacctggcaa cgcatggtat
     9901 ctcgatctgg ctaccgatat cgatcttggg caaaacaaag ccaatgaggc aatcaatcgc
     9961 ctgaaaaatg cccgtgattt gcgcaccaat ccggtgttgc agctcaacct ggcaaacgct
    10021 tatctgcaag gcggtcaacc acaagaagcg gccaatattc tcaatcgcta cacctttaat
    10081 aataaagatg acagcaacgg ctgggattta ctggcacagg cggaagccgc gctaaataac
    10141 cgcgatcagg agctggctgc gcgagcagaa ggttatgcgc tcgccggacg actcgatcag
    10201 gccatttcgc tgttgagtag cgccagttcg caggtgaaat taggcagcct gcaacaagcg
    10261 cgttacgatg cgcgcatcga ccagttgcgc cagctgcagg aacgctttaa gccttatacc
    10321 aagatgtaat tcgcattaaa ggaagaacaa tgaccaaaca ggtaaaaatc taccataacc
    10381 cacgctgttc aaagagccgg gaaacgctga acctgctgaa agaaaacggc gtggagccag
    10441 aagtggtact ctaccttgag acacccgccg atgcggcaac gctgcgcgat ttgctgaaaa
    10501 tgctggggat gaatagcgcc cgtgaattga tgcgccagaa agaggatctt tataaagaac
    10561 tgaacctggc tgacagttcg cttagcgaag aggcgctgat tcaggcaatg gtggataatc
    10621 cgaagctgat ggagcgcccg attgtggtcg cgaatggcaa agcgcggatt ggtcgtccac
    10681 cggagcaggt actggaaatc gtgggttaag atgtgctcca tcgctagttg aagcacattg
    10741 ccggatgcga cgcttgccat gtcttatccg gcctacgaat actatggatt aacttcgcgt
    10801 agttcggata aggcgttcgc gccgcatccg acaataaaca ccttatctac aacttcagaa
    10861 tttctttcac aaacggaatg gtcagcttac gttgcgcggt aatcgacgca cgatccaact
    10921 gatccaacgt cataaatagc gtgcgcattt ctctgtcgag ccgcttcagc aagaaacgcc
    10981 ccacatcttc cggcagttca aaaccacgca aacgcgcgcg taactgtagc gcctgcaact
    11041 tatcttcatc agaaagtggc tgcaatttgt agatctgccc ccagtcgagt cgcgacgcga
    11101 gatccggtaa tcccagattc aactgccgcg gtggacgatc gccggtgatc aacaaccgtg
    11161 ttttgcccga ttccagaatt cgattgtaga gatcgaaaat cgccatctcc cacaactcat
    11221 cgcctgcaat acactcaatg ttgtcgatac aaaccagcga caaatgctcc ataccgtcga
    11281 gcacttccgg aacaaaccaa gtgcgtttat ccagcgggac atagcccacc gcatcgccac
    11341 gctgcgacaa ttccgcgcaa gccgcgtgca gcagatggct gcgccccgcg ccttcgcgtg
    11401 cccagagata gatgtaaccg ctatgttcct gacgcagcac gttttgcagc gcggccagta
    11461 aagaggagtt atcccccggc cagaaacttg caaaggtttc gtcgtcagga agataaagtg
    11521 gcaaagagag ctgtgccggt gtgttcagag atacctcaac caggatttca caaaatcgcg
    11581 agaagtttac cacagaatcc catgatgttt gaaccgggca gcaacactgc ccggtcggta
    11641 cattatttgt ctgttatatc cgcctcttct gcgtccagca ccacttcttc agggcgcagc
    11701 acactgatca gtttgaaaat caaacttaag ccgataccga cgatggtcgc cagcgccata
    11761 ccttttaact ccgccgcgcc gatgtttacc ttcgcgccac tgacgccgat gatcaaaatc
    11821 acggaagtca ggatcaggtt ctgtgctttg ttgtaatcca ctttcgattc gatcaaaaca
    11881 cgaataccgg aagcaccgat gacaccataa agcagcagcg aaacgccgcc catcaccggc
    11941 aatgggatca tctggatagc ggcagccagt ttaccgacgc aggaaagcag gatagcgaaa
    12001 atcgccgccc cgccgataac ccaggtactg taaacacggg tgatcgccat cacgccaatg
    12061 ttttctccgt aagtggtatt tggcgtggag ccaaagaagc cggagatcac ggtcgacagg
    12121 ccgttagcaa acatcgaacg gtgcagacct ggatcgcgca gcagatcttt tttgacgata
    12181 ttagccgtta ctaccaggtg ccctacgtgt tcggcaataa ccactaacgc cgctggcaga
    12241 atagtcagaa tggcaaacca ctcgaagcgc ggcgtataga gggttggcag cgcaaaccag
    12301 tgagcattaa taatcggcgt ggtatcgaca attcccattg cgaaagagag cgcgtagccc
    12361 accagcacgc caattaaaat cgggataatt gccaggaaac cacgaaacag cacggaacct
    12421 aaaaccgtga ccgccagggt ggtaatagag atgatgatgg ttttggagtc tggcgtttgc
    12481 ccttcagccg ggagtaaacc cgccataccg gcagctacgc ccgccagctc cagaccgatg
    12541 acggcaacga ttgcgcccat tgccgcaggt ggaaacagca cgtccagcca gccggtcccc
    12601 gctttcttca cgataaaaga aaccaggcag aacagcacgc cgcacataat aaagccgccc
    12661 agcgcgactt cataccctaa cggcaacagt aacaataccg gtgaaataaa ggcaaagctg
    12721 gaaccaagat aagccggaat tttcccttta cagatgaaga gatacagcag cgttccaata
    12781 ccgttaaata acagtacagt cgccgggtta atatgaaata agacgggcac caggacggtt
    12841 gcaccaaaca tggcgaacaa atgttgcaaa ctaagcggga ttgtctgtaa aagtggcggt
    12901 ctttcactca ccccgatagc acggcgcgtc atagtattat cctctgtatt atgtgttata
    12961 ggcgctttac tcaaaaaaaa gccgactctt aaagtcggct ttaattattt ttattcttta
    13021 tttcgtacca aagattttgt caccggcatc gccgaggccc ggaataatgt atccgtgctc
    13081 gttcagtccc tgatcaatcg atgcggtata cagttcgacg tccgggtgcg ctttttccag
    13141 cgcagcgata ccttctggcg cagcgaccag caccagaact ttgatgctgc tgcagcccgc
    13201 ttttttcagc aggtcgatgg tcgcgataac ggaaccaccg gttgccagca ttgggtcaac
    13261 gatcagcgcc atacgctcat cgatgttaga aaccagtttc tggaagtacg gtaccggctc
    13321 cagcgtttct tcattacggt acataccgac aacgctgatg cgcgcgctcg gaacattttc
    13381 cagcacaccg tccatcatac caagacccgc acgcagaatt ggcacaacgg taattttctt
    13441 acctttgatc tggtcgattt ctaccgggcc gttccagcct tcgatagtta ctttttccgt
    13501 ttcgaggtcg gcggtcgctt cgtaagtcag caggctaccc acttcggaag cgagttcgcg
    13561 aaagcgcttg gtgctgatat cttgctcacg catcagtccc agcttgtgtt tgacgagtgg
    13621 gtgtttgact tccacgatct tcatactctt tctcctttga ggggcagcca caaaaaaatc
    13681 gacggattat acctcctttc ttcaaggcgg caatattctt ttcgttgact ttagtcaaaa
    13741 tgataacgat ttgagataaa gttattttat attcaaatgg ttatgaaaga agatcattcc
    13801 atccgaaaac taacctttgc cctggcacaa gtcttctttc gccgcgcgtc tggggaaaag
    13861 acgtgcaaaa aggttgtgca aagcagcctc gcaaacgttt gctttccctg ttagaattgc
    13921 gccgaatttt atttttctac cgcaagtaac gcgtggggac ccaagcagtg accgataaaa
    13981 cctctcttag ctacaaagat gccggtgttg atattgacgc gggtaatgct ctggttggaa
    14041 gaatcaaagg cgtagtgaag aaaacgcgtc gtccggaagt gatgggcggt ctgggcggct
    14101 tcggtgcgct gtgtgcattg ccgcaaaaat atcgtgaacc cgtgctggtt tccggcactg
    14161 acggcgtagg taccaagctg cgtctggcaa tggacttaaa acgtcacgac accattggta
    14221 ttgatctggt cgccatgtgc gttaatgacc tggtggtgca aggtgcagaa ccgctgtttt
    14281 tcctcgacta ttacgcaacc ggaaaactgg atgttgatac cgcttcagcg gtgatcagcg
    14341 gcatcgcgga aggttgtctg caatcgggct gttcactggt gggtggcgaa acggcagaaa
    14401 tgccggggat gtatcacggt gaagattacg atgtcgcggg tttctgcgtg ggcgtggtag
    14461 aaaaatcaga aatcatcgac ggctctaaag tcagcgacgg cgatgttctg attgcactcg
    14521 gttccagcgg tccgcactcg aacggctatt cgctggtgcg caaaattctt gaagtcagcg
    14581 gttgtgatcc gcaaaccacc gaacttgatg gtaagccatt agccgatcat ctgctggcac
    14641 cgacccgcat ttacgtgaag tcagtgctgg agttgattga aaaggtcgat gtgcatgcca
    14701 ttgcgcacct gaccggcggc ggcttctggg aaaacattcc acgcgtattg ccagataata
    14761 ctcaggcagt gattgatgaa tcttcctggc agtggccgga agtgttcaac tggctgcaaa
    14821 cggcaggtaa cgttgagcgc catgaaatgt atcgcacctt caactgcggc gtcgggatga
    14881 ttattgccct gcctgctccg gaagtggaca aagccctcgc cctgctcaat gccaacggtg
    14941 aaaacgcgtg gaaaatcggt atcatcaaag cctctgattc cgaacaacgc gtggttatcg
    15001 aataatgaat attgtggtgc ttatttccgg taacggaagt aatttacagg caattattga
    15061 cgcctgtaaa accaacaaaa ttaaaggcac cgtacgggca gttttcagca ataaggccga
    15121 cgcgttcggc cttgaacgcg cccgccaggc gggtattgca acgcatacgc tcatcgccag
    15181 cgcgtttgac agtcgtgaag cctatgaccg ggagttgatt catgaaatcg acatgtacgc
    15241 acccgatgtg gtcgtgctgg ctggttttat gcgcattctc agcccggcgt ttgtctccca
    15301 ctatgccggg cgtttgctga acattcaccc ttctctgctg ccgaaatatc ccggattaca
    15361 cacccatcgt caggcgctgg aaaatggcga tgaagagcac ggtacatcgg tgcatttcgt
    15421 caccgatgaa ctggacggtg gcccggttat tttacaggcg aaagtcccgg tatttgctgg
    15481 tgatacggaa gatgacgtca ccgcccgcgt gcaaacccag gaacacgcta tttatccact
    15541 ggtgattagc tggtttgccg atggtcgtct gaaaatacac gaaaacgccg cgtggctgga
    15601 tggtcaacgt ctgccgccgc agggctacgc tgccgacgag taatgccccc gtagttaaag
    15661 cgccagctct gccgctggcg tttttcaatt cacctgtaaa tcgcaagctc cagcagtttt
    15721 tttccccctt ttctggcata gttggacatc tgccaatatt gctcgccata atatccaggc
    15781 agtgtcccgt gaataaaacg gagtaaaagt ggtaatgggt caggaaaagc tatacatcga
    15841 aaaagagctc agttggttat cgttcaatga acgcgtgctt caggaagcgg cggacaaatc
    15901 taacccgctg attgaaagga tgcgtttcct ggggatctat tccaataacc ttgatgagtt
    15961 ctataaagtc cgcttcgctg aactgaagcg acgcatcatt attagcgaag aacaaggctc
    16021 caactctcat tcccgccatt tactgggcaa aattcagtcc cgggtgctga aagccgatca
    16081 ggaattcgac ggcctctaca acgagctatt gctggagatg gcgcgcaacc agatcttcct
    16141 gattaatgaa cgccagctct ccgtcaatca acaaaactgg cttcgtcatt attttaagca
    16201 gtatctgcgt cagcacatta cgccgatttt aatcaatcct gacactgact tagtgcagtt
    16261 cctgaaggat gattacacct atctggcggt ggaaattatc cgtggagaca ccatccgtta
    16321 cgcgctgctg gagatcccat cagataaagt gccgcgcttt gtgaatttac cgccagaagc
    16381 gccgcgtcga cgcaagccga tgattcttct ggataacatt ctgcgttact gccttgatga
    16441 tattttcaaa ggcttctttg attatgacgc gctgaatgcc tattcaatga agatgacccg
    16501 cgatgccgaa tacgatttag tgcatgagat ggaagccagc ctgatggagt tgatgtcttc
    16561 cagtctcaag cagcgtttaa ctgctgagcc ggtgcgtttt gtttatcagc gcgatatgcc
    16621 caatgcgctg gttgaagtgt tacgcgaaaa actgactatt tcccgctacg actccatcgt
    16681 ccccggcggt cgttatcata attttaaaga ctttattaat ttccccaatg tcggcaaagc
    16741 caatctggtg aacaaaccac tgccgcgttt acgccacatt tggtttgata aagcccagtt
    16801 ccgcaatggt tttgatgcca ttcgcgaacg cgatgtgttg ctctattatc cttatcacac
    16861 ctttgagcat gtgctggaac tgctgcgtca ggcttcgttc gacccgagcg tactggcgat
    16921 taaaattaac atttaccgcg tggcgaaaga ttcacgcatc atcgactcga tgatccacgc
    16981 cgcacataac ggtaagaaag tcactgtggt ggttgagtta caggcgcgtt tcgacgaaga
    17041 agccaacatt cactgggcga agcgcctgac cgaagcaggc gtgcacgtta tcttctctgc
    17101 gccggggctg aaaattcacg ccaaactgtt cctgatttca cgtaaagaaa acggtgaagt
    17161 ggtccgttac gcacacatcg ggaccgggaa ctttaacgaa aaaaccgcgc gtctttatac
    17221 tgactattcg ttgctgaccg cagatgcgcg tatcaccaac gaagtacggc gggtatttaa
    17281 ctttattgaa aacccatacc gcccagtgac atttgattat ttaatggtgt caccgcaaaa
    17341 ctctcgccgt ctgttatatg aaatggtaga ccgcgaaatc gccaacgcgc agcaagggct
    17401 gcccagtggt atcaccctga agctaaataa ccttgtcgat aaaggcctgg ttgatcgtct
    17461 gtatgcggcc tccagctccg gcgtaccggt taatctgctg gttcgcggaa tgtgttcgct
    17521 gatccccaat ccggaaggca ttagcgacaa cattcgtgcc atcagtattg ttgaccgtta
    17581 ccttgaacat gaccgggttt atatttttga aaatggcggc gataaaaagg tctacctttc
    17641 ttccgccgac tggatgacgc gcaatattga ttatcgtatt gaagtggcga caccgctgct
    17701 cgatccgcac ctgaagcagc gggtgctgga catcatcgac atattgttca gcgatacggt
    17761 caaagcacgt tatatcgata aagaactcag taatcgctac gttccccgcg gcaatcgccg
    17821 caaagtacgg gcgcagttgg cgatttacga ctacatcaaa tcactcgaac aacctgaata
    17881 accctatgcc aatacacgat aaatcccctc gtccgcagga gtttgctgcg gtcgatcttg
    17941 gttcaaacag ttttcacatg gtcatagccc gtgtggtaga tggtgccatg cagattattg
    18001 gccgcctgaa acagcgagtg catctggcgg acggcctggg gccagataat atgttgagtg
    18061 aagaggcaat gacgcgcggt ttgaactgtc tgtcgctgtt tgccgaacgg ctacaagggt
    18121 tttctcctgc cagcgtctgt atagtcggca cccatacgct gcgtcaggcg ctgaacgcca
    18181 ctgactttct gaaacgcgtg gaaaaggtca ttccctaccc gattgaaatt atttccggta
    18241 atgaagaagc ccgtctgatt tttatgggcg tggaacatac ccaaccggag aaaggtcgca
    18301 aactggttat tgatattggc ggcggatcta cggaactggt gattggtgaa aatttcgaac
    18361 cgattctcgt tgaaagccgc cggatgggtt gtgtcagctt tgcccagctt tacttccctg
    18421 gcggggtcat caataaagag aattttcagc gcgctcgtat ggcggcagca caaaaactgg
    18481 aaactttaac ctggcaattc cgtattcagg gctggaacgt ggcaatgggc gcttccggta
    18541 ccataaaagc cgcccatgaa gtgttaatgg aaatgggcga gaaagacggg ataattaccc
    18601 cggaacgtct ggaaaaactg gtaaaagaag ttttacgtca ccgtaatttc gcatcgctga
    18661 gtttaccggg tctttccgaa gagcggaaaa cagtcttcgt tcctggactg gcgattttat
    18721 gcggtgtgtt tgatgcttta gccatccgtg aactgcgcct ttctgacggg gcgttacgcg
    18781 aaggcgtact gtacgaaatg gaaggacgtt tccgtcatca ggatgtgcgt agtcgcaccg
    18841 ccagcagcct cgccaaccag tatcacatcg acagcgaaca ggcccgacgg gtgctggata
    18901 ccactatgca aatgtacgaa cagtggcggg aacagcaacc gaagctggcg catccgcaac
    18961 tggaggcgct actgcgatgg gccgccatgc tgcatgaggt cgggttgaat atcaaccaca
    19021 gcggtttgca tcgccactcc gcttatattc tgcaaaacag tgacttgccg ggttttaatc
    19081 aggaacagca gctgatgatg gcgacactgg tgcgctatca ccgcaaagcg attaaactcg
    19141 acgatctgcc gcgctttacc ttgtttaaga agaaacagtt cctgccactg attcagctat
    19201 tgcgccttgg cgtattactc aacaatcaac gtcaggcaac caccacaccg ccaacattga
    19261 cactgattac tgatgacagt cactggacac tgcgtttccc gcatgactgg tttagtcaga
    19321 atgcgttggt actgcttgat ctggaaaagg agcaagaata ctgggaaggc gtggctggct
    19381 ggcggttgaa aattgaagaa gaaagtacac ctgaaatcgc cgcttaatgc tttgcgggcc
    19441 gacgagaaat gtcggcccgc attattcagg cactttcgcg aatgggtt
//
LOCUS       DADKRT010000072        19410 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.073, whole genome shotgun sequence.
ACCESSION   DADKRT010000072 DADKRT010000000
VERSION     DADKRT010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19410
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.073"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(260..1017)
                     /locus_tag="JQ356_002119"
                     /pseudo
     CDS             complement(260..1017)
                     /locus_tag="JQ356_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312171.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
     gene            complement(1025..2128)
                     /locus_tag="JQ356_002120"
     CDS             complement(1025..2128)
                     /locus_tag="JQ356_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HAY4622209.1"
                     /translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
                     MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL
                     VLLIGLVSIAPMFWKILPHRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
                     LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
                     PLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
                     GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG
                     YVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH"
     gene            complement(2138..3308)
                     /locus_tag="JQ356_002121"
                     /pseudo
     CDS             complement(2138..3308)
                     /locus_tag="JQ356_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026209.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
     gene            complement(3376..4437)
                     /locus_tag="JQ356_002122"
     CDS             complement(3376..4437)
                     /locus_tag="JQ356_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4622210.1"
                     /translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
                     LLGFSYADADGKFSGIDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERF
                     TALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGAT
                     VCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALR
                     IKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE
                     KAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK
                     RGQNNLWNNGGIQYAPPVR"
     gene            complement(4868..5089)
                     /locus_tag="JQ356_002123"
     CDS             complement(4868..5089)
                     /locus_tag="JQ356_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622211.1"
                     /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGCLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIAMSK"
     gene            complement(5342..8446)
                     /gene="acrF"
                     /locus_tag="JQ356_002124"
     CDS             complement(5342..8446)
                     /gene="acrF"
                     /locus_tag="JQ356_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit AcrF"
                     /protein_id="HAY4622212.1"
                     /translation="MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVS
                     VSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTNDSAGSVTITLTFQSGTDPDI
                     AQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVAS
                     NVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQ
                     LGGTPALPGQQLNASIIAQTRLKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYN
                     VIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQ
                     LSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLS
                     AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENK
                     GGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEE
                     DQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAG
                     MAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFE
                     LIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALSV
                     SLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRMLPEDVDKLYVRSANGEMV
                     PFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGY
                     DWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLA
                     ATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLR
                     PILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFLPVFFVVIRR
                     CFKG"
     gene            complement(8458..9615)
                     /gene="acrE"
                     /locus_tag="JQ356_002125"
     CDS             complement(8458..9615)
                     /gene="acrE"
                     /locus_tag="JQ356_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrE"
                     /protein_id="HAY4622213.1"
                     /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV
                     KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA
                     NYNSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAK
                     GTVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQS
                     SNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLR
                     AVFPNPQHTLLPGMYVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEAR
                     PVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK"
     gene            10014..10676
                     /gene="acrS"
                     /locus_tag="JQ356_002126"
     CDS             10014..10676
                     /gene="acrS"
                     /locus_tag="JQ356_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrS"
                     /protein_id="HAY4622214.1"
                     /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT
                     RGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAK
                     IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD
                     VVMIIINGAFSGIVQNWLMNMAGYDLYKQAPALVDNVSRMFMPDENITKLIHQTNELS
                     VM"
     gene            complement(10679..10858)
                     /locus_tag="JQ356_002127"
     CDS             complement(10679..10858)
                     /locus_tag="JQ356_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 domain-containing protein"
                     /protein_id="HAY4622215.1"
                     /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNP
                     LKLVNCDELNFQDRM"
     gene            complement(10942..11826)
                     /gene="yhdJ"
                     /locus_tag="JQ356_002128"
     CDS             complement(10942..11826)
                     /gene="yhdJ"
                     /locus_tag="JQ356_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY4622216.1"
                     /translation="MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYN
                     IGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF
                     TIKSRIVWSYDSSGVQAKKHYGSMYDPILMMVKDAKNYTFNGDAILVEAKTGSQRALI
                     DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIV
                     LDPFAGSFTTGAVAVSSGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG
                     NLSKRSRLSEVDPDLIAK"
     gene            complement(11912..12208)
                     /gene="fis"
                     /locus_tag="JQ356_002129"
     CDS             complement(11912..12208)
                     /gene="fis"
                     /locus_tag="JQ356_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HAY4622217.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            complement(12234..13199)
                     /gene="dusB"
                     /locus_tag="JQ356_002130"
     CDS             complement(12234..13199)
                     /gene="dusB"
                     /locus_tag="JQ356_002130"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HAY4622218.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY
                     RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            complement(13528..14409)
                     /gene="prmA"
                     /locus_tag="JQ356_002131"
     CDS             complement(13528..14409)
                     /gene="prmA"
                     /locus_tag="JQ356_002131"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HAY4622219.1"
                     /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL
                     DPVVEKEEWCRITGRKN"
     gene            complement(14421..15872)
                     /gene="panF"
                     /locus_tag="JQ356_002132"
     CDS             complement(14421..15872)
                     /gene="panF"
                     /locus_tag="JQ356_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HAY4622220.1"
                     /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVETLQ
                     TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH
                     PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK"
     gene            complement(15862..16104)
                     /locus_tag="JQ356_002133"
     CDS             complement(15862..16104)
                     /locus_tag="JQ356_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HAY4622221.1"
                     /translation="MDTRFVQAHKEARWALGLTLLYLAVWLAAAYLPDVAPGFTGFPR
                     WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
     gene            complement(16197..17132)
                     /locus_tag="JQ356_002134"
     CDS             complement(16197..17132)
                     /locus_tag="JQ356_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY4622222.1"
                     /translation="MGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSH
                     RAIFFGCVGNDDFGRLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQQRDFVFNI
                     PNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGTVSFDP
                     NIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGGVKH
                     VAIKRAQRGASYYKLKNGTLHAQHVTGHDIEIIDPTGAGDCFGATFITLFLSGFPAHK
                     ALQYANASGALAVMRQGPMEGISSLADIEDFLQQH"
     gene            complement(17164..17994)
                     /locus_tag="JQ356_002135"
     CDS             complement(17164..17994)
                     /locus_tag="JQ356_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY4622223.1"
                     /translation="MKSVNVPRKSSNLLKRRLKIAEIVAAQGEIKVDDLSAQLGVSGV
                     TIRGDLSYLEQQGYLKRSFGGAIATPLSSEPEAIQPIAPLSLAQQMEIARHCARLIRD
                     RDTLFLGHGTICRKIIPLLSEVKKLRLITNDPEHALLANQFIDGEIILAGSEMLRPDT
                     ALAGKPLEQALQHFTITHSILEINHLDADGTLNINVPRLAAAWQLCFDHAQNKTVIVA
                     ADPAPSTAAIGHLHQAENVIVSRSINEQYQQQLQSADFVILYTSNECFTWSNRERLQE
                     "
     gene            18337..19191
                     /locus_tag="JQ356_002136"
     CDS             18337..19191
                     /locus_tag="JQ356_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose bisphosphate family class II aldolase"
                     /protein_id="HAY4622224.1"
                     /translation="MYIISSKNMLKKAQSEGYAVPAFNIHNLETLQVVVESAAQLRSP
                     VMLAGTPGTYRYGGVGSLISLVQSLAREYNLPLVLHLDHHEESDDIFNKVRAGIRSVM
                     IDGSHLPFEDNIARVQEVTTFCHRFDVSVEAELGRLGGQEDDLLVDEKDSAYTSPAAA
                     AEFVQRTQIDSLAVAIGTAHGLYAHEPRLDFVRLEQIRQRVEIPLVLHGASGLSEQDV
                     QHCIRRGICKVNVATELKIAFADALKGYFYNNPAANDPRHYMQPAKAAMKEVVTRIIG
                     VCGSEGKI"
     gene            19227..>19410
                     /locus_tag="JQ356_002137"
     CDS             19227..>19410
                     /locus_tag="JQ356_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622225.1"
                     /translation="MKNIKLLGSAMLVSLALFSQNSLAKEYKIGASLLTQQHPFYIDL
                     ANAMKEEAKKDNVNLSV"
BASE COUNT         5166 a         4862 c         4619 g         4763 t
ORIGIN      
        1 cccatgcgag agtagggaac tgccagacat caaataaaac aaaaggccca gtcttccgac
       61 tgagcctttt gttttatctg ttgtttgtcg gtgaacactc tctcgagtag gacaaatccg
      121 ccgggagcgg atttgaacgt tgcgaagcaa cggcccggag ggtggcgggc aggacgcccg
      181 ccataaactg ccagacatca aatcaagcaa aaaggccatc cgaaaggatg gcctttttgc
      241 ttttcgaact aacattcaat taatggatta cctgcgataa aaatgccctc gtacgctctg
      301 atttaggatg cgtaaaaaat tcatcaggtg cagcttgttc cactatctcc ccacgatcca
      361 taaaaattac ccggtcagcg acggtacgtg caaaccccat ctcatgtgtt acacacaaca
      421 ttgtcatacc cgactgcgcc agcccaatca tcgtatccag cacctctttc accatctccg
      481 gatcgaggcc gacgttggtt catcaaacaa cataattttc ggcttcatac acagcgaacg
      541 cgcaatggca acgcgttgct gctgaccacc tgaaatctgt ccgggaaact tatgcgcatg
      601 ttcggcaatt ctcacccgct caaggtaatg catcgccaga gcttcagcct ctttcttagg
      661 catcttgcgt acccaaatcg gtgccagggt acagttctgt aaaacggtca gatgagggaa
      721 gagattgaaa tgctgaaata ccattcccac ttcttgcctg acgcgctcaa tattgcggat
      781 atcttcatta agttcgatgc catctacgac aatccgtccc tgttgatgtt cttccagatg
      841 attaatacaa cgaatggttg tcgatttacc ggaaccagaa gggccacaca gaacgatccg
      901 ttctcccggt tgcacggtta aatttatatt tttcaaaaca tggaattgtc cataccattt
      961 atggacgttt tccagcgtaa tcatcgcgtt agcaggttgc agtaaaattt ggctcatagt
     1021 gtcctcaatg cggtgtacgc ccggtgttaa aacgtttttc cagatgttgg ctataacgtg
     1081 acatgctgaa acaaaagatc cagtagatca gcgcggcgaa aacataccct tccgtcgaca
     1141 tacccaacca ggcgggatca acggttgcct gctgaacgct actgaaaaga tcgaacaagc
     1201 cgatgatgat caccaggctg gtatctttga agagtgcgat gatggtattt accagcccag
     1261 gaattaccag cttcaacgcc tgtggcagaa taaccagccc ctgagttttc cagtacccca
     1321 acgccagcga ctctgccgct tcatattgcc ctttaggtag ggcctgtaat ccgcctcgca
     1381 cgacttccgc aacatatgct gactgaaaca ggatcacgcc aaccagcgcg cggatcagtt
     1441 tgtcgatact ggtgccttct gccataaaca acggcagcat gaccgaagac ataaacaata
     1501 cggtaatcag cggtacgccg cgccagaact cgataaaaat gaccgataag atacgcacaa
     1561 tcggcatatg ggagcggcga cctaacgcca gtaagatccc ccacggtagc gcccccgcaa
     1621 tcccaacgga tgcaataatt aaagttagcg tcagcccgcc ccattgccgg gtttcaaccc
     1681 gctcaagacc aaaaaaaccg ccatacatca gccaccagac aatcagtggg taaatcaccg
     1741 cccagaccgc aatatagcga ccgcgatgcg ggagtatttt ccagaacatt ggtgcgattg
     1801 acacaaggcc aatcagtaat actaggttaa ttcgccagcg ttggtcgtgt gggtaaagtc
     1861 catacataaa ctgaccaaat cgttcgtgga tgaagaccca acaggcaccg gcttttgtgc
     1921 agtcggcacg cgttgagcca acccagttag cctgcaaaaa tgcccagttc agcaacggtg
     1981 ggatcagttc ccacatcaac catatgcagc caatagtcag caggctattg ctccagctgg
     2041 agaacagatt ttttcgcacc cacaccatcg cgcggcttga gttatggctc gctgggcgcg
     2101 agggctgaga cagcaatact tttgtcatca tgactcctta gcgttcaacg atcgcgatgc
     2161 ggcggttata gatattcatc agcagcgaga tagtcaggct gataatcaga tagaccgaca
     2221 tggtcatggc tatcgtctcg atggcttgcc ccgtctggtt cagcacggtg ccagcaaaca
     2281 gcgaaaccat atcgggatag ccaatagcgg cggcaagaga ggagtttttg acgatgttga
     2341 gatactggct ggttaacggc ggaataatca ctcgcagtgc ctggggaata atgacccggc
     2401 gtagcgtaac cccagtgacc gagccgcttc atgttgacca taaggcactg cctggatccc
     2461 agcgcggata atctcggcga taaatgcaga ggtataaacc gaaagtgcca gcgttaaggc
     2521 tgccagttca ggaattaaaa ccattccgcc gcggaagtta aagcctcgta gggctgggac
     2581 atcccagtgt agtgctgcgc caaaaagcca ttgcgccagt aaaggcaaac cgatgatcaa
     2641 cactgcggcg aacggccagg tgcggcgcag ttgtccggtc tttatctggt atgttttatt
     2701 aaagcggaat agcccaacag aaaggactat agccataaca acagctagga taaacgcaat
     2761 aaatccgtct cccagctgcg gtgacggaat ataaagccca cgattgctca aaaaggccag
     2821 atcaaacgcg ctcacagcct ggcgcgtggt ccgggcaaat tgcgcaacac ggcaaagtac
     2881 cagaagaaga tttgcagcag cgggggaata ttacggaaga tctcaatata aattgtggat
     2941 agctttcgta gcagtcagtt atccgaaagt ctcgtcagac cgataaagaa gcctaaaaca
     3001 gaagcgaaca caatacacaa tgcagaaacc agtagcgtat tgagtaagcc gacaataaaa
     3061 acgcgtccgt aggtgtcgcc ctgctggtaa tcgatcaaat gctggacaat accgaagcca
     3121 gcgccgcgat ccagaaaggc aaaacctgaa gtaatgccac gattactgag attcgttaca
     3181 gtgttgtgaa ataaccaacc aacaattccg acaacagcaa caacggcaag gatctggaat
     3241 aaccaggcac gaaccgtagg gttggcaaag gagagtgagc ctttaacggt tgagcggcga
     3301 tgagacatag aaacctcgga aagcataacg ctgaagagag cgccgccgta gcgacgctcg
     3361 ttacctcaca ccgacttaac gcacgggcgg cgcgtactga ataccgccgt tattccagag
     3421 attattttgc ccacgtttaa ttttcagcgg gctttctgaa cctacgttac gctcgaaaat
     3481 ttccgagtag ttacccacct gtttgatgat gttataggcc catttattat ccaacttcag
     3541 atccttgccg taatcgcctt ctttacccag cagatgtgcc atatcaggcg ttgctggatt
     3601 agccgctttt tcatcgacgt tctgggaatt gatgcccatc tcttcagcat tcagcatggc
     3661 gaaaagcgtc cagcgtacaa tcgagaacca ttcatcatcg ccacgacgaa ctaccggccc
     3721 aagcggttct ttagagataa cctccggtaa gacaatccat tcagctgggt tgcttaattt
     3781 gatgcgcagg gcatacagtt gcgactgatc cgaggccagc gtatcgcagc gaccagattc
     3841 cagtgccttc gctgattcgt cagagcgatc gaaagtcacc ggtgtgtact tcatattgtt
     3901 tgccttgaaa tagtcggcaa cgttgagttc ggtatcagta cccgcctgaa tacagacggt
     3961 agcgccatcc agttctttcg cgctttttag ccccgcttta tcgtgcgtca ggaagccaat
     4021 gccgtcgtaa taagtgacgc cagtaaatgc cattcccatc ccggcgtcgc gagatgaagt
     4081 ccaggtcgta ttacgggaga gcaaatccac ttcccctgac tgtaaagccg tgaagcgttc
     4141 ttttgctgtg agtggggtat atttcacttt cgtgtcgtca ccaaatacag cagcggcaac
     4201 actacgacaa acatcaacat caacatcaac atcaacatca acatcaacat caacatcaat
     4261 acctgaaaac ttaccgtctg catcggcata agagaaccca agtaatccat cactgatccc
     4321 gcattgcaca aaaccttttt tctgaacggc atcaagcgtc gcgccagcat gcgcctgatt
     4381 tgcaacggca agcagcacgc tggcggcagc cagtgtggct atcatcatct ttttcataat
     4441 gcttcctgtg aggcgaaaat tatcgttata ggacgtttgg gaaacgtctt ttacctgtct
     4501 gtggccatcc tcttataagc aaaagtagtg ccagcttttg cgcacgattt cgcgtcgcaa
     4561 taagctgagt gtagacagga aataataaaa acagcgcccc gcaatggtgc gaaaatgaaa
     4621 catgcgccac attttggcgc aaaatattta cgcgtgtttt actaagcaga ataatgattg
     4681 ttagcgtgag tatatttctg gtgggaagtg tgaaagttaa attgatgcgt tatttcgaaa
     4741 gcagcgaaat aacgcgatat aacatgctaa atcagcagag aattagccag cagaatatag
     4801 caatatttta tcttatgtaa agatactgta tcgttaaaca gagcgcgaaa ctccgcgccc
     4861 tgttcagtta tttcgacata gcgatgatcc ccatcgtcag gccagcaaca gccgctgccc
     4921 cgccggcaat agccccagcc gtttcccagt tatcctgagt cgtgcctttc atacaggtat
     4981 tggtgtgaac cagacaaccc tgatcgtcat aaaccggaac gcagggcgaa tcgtgagcac
     5041 agcccgccag caatgcggtg agcaatgcca caggaattaa tcttttcatg gtgttacctc
     5101 agtaataaac gctaacgctt aataagttaa ctctcttatt aacgagctga atgccatttt
     5161 atcaccggag gttataaata ttgcggaatg aataatgaca aattatgtga attgtaaaaa
     5221 tagtgaaggg agcgggaact atagaaagtt tttaaagagt gagtggaaga atatcttatt
     5281 aatttttatg ggtttcactg aaaataataa aggcacccga aagtgccttt atgtttctga
     5341 tttatccttt aaagcaacgg cggatcacca caaagaacac cggtaggaag aagattgcca
     5401 gcaacgttgc agagaccatt ccgcccatta ccccgatacc cactgcgttc tgcgcgccac
     5461 tgcctgcacc gttactgata gctagcggta atacgccgag aataaaggcg agagaggtca
     5521 tcaggatagg acgcagacgc atacgtactg ccattagtgt cgcttcaaca acacctttac
     5581 cctctttctc catgagatct ttagcgaact caacaatcaa aatagcgttt ttggccgaca
     5641 agccaattgt cgttagcaag cccaccataa agtagacgtc atttttttga ttaaagagtg
     5701 tcgccgccag cagcacgccg acaatcccta acggcacgac caacataacc gagacaggaa
     5761 ttgaccagct ttcatagagt gcagcaaggc acaggaaaac aaccacaaag gaaattgcta
     5821 ctagagcggg agcctggttt cccgataagc gttcctgata cgacataccc gtccagtcat
     5881 aaccaatgcc cgcaggtaat tttgacgcaa ggttttccat caacgccatg gcatcgccgg
     5941 aactggttcc tggcgcggct tccccctgaa tctccattga cggcagaccg ttgtagcgtt
     6001 ccagtcgcgg agagccatac acccaatgtg aagtggtaaa ggccgagaat ggcaccattt
     6061 cgccgttggc gctgcggaca taaagtttat cgacatcttc tggcagcata cggaatttgg
     6121 catccgcctg aacatacacc tttttcacgc gaccacggtc gatgaagtcg ttaacgtaag
     6181 tcccacccaa cgccgttgaa atggtctgat tgatgtcaga aagtgaaaca cttaatgcct
     6241 gcgccttttc ctggtcaact tccagtttaa actgcgcggt gtcttccagg ccattaggac
     6301 gcacgctgac taagctggca ggatgttgcg ccgccatacc aagcaactgg ttacgggcct
     6361 gggttagggc atcgtgaccc agcccagcct gatcaattaa ctcaaagtcg aaacccgttg
     6421 ccgtgcccag ttcaacaatg gctggcatat tgaatggaat gacaaaaccg tcgcggatct
     6481 tgcccaattc cattttggca cgatggatta ccgcttccgc actgttttca tcaccattac
     6541 gctcttccca cggtttcaga ctgacgaagg ccataccggc gttttgtgcc tggccgctga
     6601 agctaaagcc gttaaccgta aagacacttt caacgttcgc tttctcgttc ttcagatagt
     6661 aatccgtcac ttgatccaac actttttgcg tccgctcttg cgtcgcgcca gcgggtaact
     6721 gaatcatggt cagaaagaca ccctgatcct cttcaggtaa gaaggaagac ggaagacgta
     6781 aaaacaacac caccattcct gcaacaatca gcgcatagat cagtaaatat cgtcctgtgg
     6841 aaccgaggat tttgccgacg ctgttggtgt agtggttaac gctatgatcg aaggtggtat
     6901 taaaccagcc gaagaaaccg cccttatttt cgtgatgctc agcagagacg ggtttaagca
     6961 gcgttgcaca taacgcaggg gtaagaatca atgccaccag aacagaaagt gccattgccg
     7021 aaacgatggt gatagagaac tggcgataaa ttgccccagt agaaccgccg aagaatgcca
     7081 tcggaataaa taccgctgac agcaccatcg cgatacccac cagtgcgccc tgaatttgcg
     7141 acatcgattt ttccgtcgct tcttttggcg ggagcttatc ctccatcatc acgcgctcga
     7201 cgttctccac caccactatc gcatcatcga cgagcagccc gatggcaagc accatcccga
     7261 acatcgttag tgtgttgatg gagtaaccaa aagcggcgag gatggcaaac gtccctaaca
     7321 acaccacggg taccgcaatg gtggggatca gcgttgctcg catattctgc aagaacagat
     7381 acatcaccag gaacaccagc ataatggctt cgaacagcgt ttttaccact tcgtgaatag
     7441 aaagctggac gaatggcgtg gtgtcataag ggtagagaac cttcattccc tgcgggaaga
     7501 atggctgtaa ttccgccagt tttgccttaa tggctttcgc ggtatcgaga gcattcgcgc
     7561 cggttgccag cttaatcccc aggcccgccg ccggttttcc gttgatacga gcgataacgt
     7621 tatagttttc accgccaagt tcaacccgtg cgacatcttt caggcgtacc accgagccgt
     7681 cactgtttac gcgcagggtc actttgccga attcttccgg attttttaac cgcgtttgag
     7741 caataatcga ggcattcaac tgttgccctg gtaacgctgg cgttccgccc aactgtccgg
     7801 cagcgatctg atcgttctgt accttcaact ggttaatcac atcaaccggt gtcagtttat
     7861 atttgtttag cagatcggcg tccagccaga tacgcatcgc atactgtgcg ccgaaaagct
     7921 gtacgtcacc gacgccattc agacggctaa gcgtatcttt aacgttagag gccacatagt
     7981 ccgagatatc gtcctgtgtg gtgcctgggt tatcagagac aaaacccgcc accatcaaat
     8041 agctgctact ggacttttca acactgatcc cctgctgctg aacctcctgc ggcagcaacg
     8101 gcgtggcgag ctggagtttg ttctgcacct gcacttgcgc gatatcagga tcggtcccgg
     8161 actggaaggt aagggtaatt gtcacgctac cggcggaatc gttggtggag gacatataca
     8221 tcaggttatc gataccattc atattctgtt cgataacctg cgtcaccgta tcctgcacgg
     8281 tctgcgcatc agcacctgga tagtttgccg aaacagaaac cgcaggcggt gcaatggttg
     8341 gatactgagc gacgggcaat tgtaggatcg ccagtgcgcc cgccatcatc agaataatgg
     8401 ccagcaccca tgcaaatatc ggtcgtcgaa taaaaaagtt tgccatgtca gattacctta
     8461 cttcgatgca gtatctgcgg gggtatcggt agtggcttta acctgctctc ccggacgcgc
     8521 tttttgcagg ccgctgacaa tgacttgatc gccagatttc agaccttcgc taatcaacca
     8581 tttatcgcca atcgcctgac tggcaacgac agggcgcgct tccacctgac ttttatcgtt
     8641 aacaatcagc acggttgcat caccacgcgg tgtgcggcta acgccttgtt gcgggataag
     8701 aatggcgtca ggttggacgc cttcatcaat ccgtgcacgc acatacatac ccggcaaaag
     8761 cgtatgttgc gggttaggga agacagcacg tagggttatg gagccggtgc tttcatcaac
     8821 ggtcacatca gagaattgca gcgtaccttt caggggatag gtttgaccgt tttccatgac
     8881 caactctacg ttgctggtgg cgttttcctt atgcaaattt ccttgctcta cggattgctt
     8941 cagcctcata aaatcgttgc tggattgggt cacatcaacg tagataggat cgagctgctg
     9001 gacagtcgcc agttcagtcg tttgcccatt agtgacaaga gcgccttcgg tcacggtcga
     9061 tttgccgata cgtccgctaa ttggcgcagt cactttggta taagcgagat tgatgcgagc
     9121 gctttcgact gtgccttttg cggcaatcac ggcggcatcg gcctggcgag catcagcaat
     9181 ggcctggtcg tactcctgct ggctgatgta tttcgtaccc acgagcggaa cgtaacgttt
     9241 taccgtcaaa tgcgcgatgg cggcggcggc ttcacttttc gccagttcgc ctttcgcgct
     9301 gttataattt gcctgatagg tcgcgggatc gatctggtac agggactggc ctgcttgtac
     9361 atcgctgcct tcagtgaaat tacgattcag tacgatcccg ctaacctgtg ggcgaacttc
     9421 ggctatacgg taagcattgg tgcggcctgg taattcagtc ttaacttcta acggggccgt
     9481 tttcacaata tgaacggtaa cctgcggttc accgacgtga gctttctctt ctcccttatc
     9541 gttacaaccg gcgattaaag ccgcggagat cagaataaag gagggcagga ggaaaaacct
     9601 ggcatgtttc gtcattacta ttcctcaaaa aaccaaaagc gcgttattta cccagaaagg
     9661 caacgcgtta actcgcagaa agaaaaatac agtttgctat cctacaaatt atcattcgtc
     9721 gatgtaagga atagttatga atactggcgt ctcaaggcac ataaacacaa aaaaagatta
     9781 atattctact gttttatttt gacgcgggtt gaaagaggca gaattaaaac ctcgtaaatt
     9841 gaaatatata ttcatgtggc gaatgtattt taggtaaata atatacattg tttatttgac
     9901 gatttatagc aactcaatgt taccctctcg tataaataca cattagatga tagattaacc
     9961 ttcgctattt tctcaccctg tgtcgaatat atttatttcc tgaataatta atcatggcaa
    10021 aaagaaccaa agccgaagct ctgaagaccc ggcaagaact gattgaaact gccatcgccc
    10081 agtttgcgca gcatggcgta agcaagacga cgctcaacga cattgccgac gccgctaacg
    10141 ttacgcgtgg cgctatctac tggcacttcg aaaacaagac tcaactgttt aatgagatgt
    10201 ggttgcaaca gccttcattg cgggagttaa tccaggaaca cttgacggct ggattagagc
    10261 atgacccgtt tcaacaattg cgtgaaaaat tgattgtcgg cttgcaatat attgccaaaa
    10321 ttccccgcca gcaggcgttg ctgaaaatct tatatcacaa atgtgaattt aatgatgaga
    10381 tgctggccga gggagtgata cgcgaaaaga tgggctttaa tccgcagact ctccgcgaag
    10441 tattgcaggc gtgtcagcaa caaggttgtg tagcaaataa cctcgattta gatgttgtga
    10501 tgattattat taatggtgcc ttcagcggaa ttgttcaaaa ctggttaatg aatatggcgg
    10561 gttatgatct ttataaacaa gcacccgcgc tggtcgataa cgtatcaaga atgttcatgc
    10621 ctgatgaaaa cataacgaaa ttaattcatc aaacgaatga attaagtgtc atgtaaattc
    10681 acattctgtc ctgaaaattc agttcgtcac agttaaccag ttttagtgga ttaactgagt
    10741 tcatattacg gcatttgtct gtttctgttg tcagcagttc aatccactgc atcagtaaag
    10801 tatcaaacag aaaaacgaag acagcgaaaa cgacgagcca ccaatacttg cgaatcatta
    10861 cctgagcctg tgcatgttta accaagtctg gcaggaaata tacacgaaat gaataatctg
    10921 aaaaccaggc ttacacttcc tttactttgc aatgagatcg gggtcaactt cgcttaaccg
    10981 gcttcgtttt gacaggttgc cggtctttct ttttttcact ttcgccagtt cttccgcaga
    11041 gtaatgcgac gcgacatcca gccgtcgaag ccccattttg atgtactcgc tgttgatctc
    11101 aataccaatg aattttcgcc cgctggagac ggctacggca ccggtagtaa agctaccggc
    11161 aaacgggtcg agaacgatat cgcctgggtt ggaagaggcg agaataatgc gtttcagtaa
    11221 ggcttccggt ttttgcgtcg ggtggttctc atattcatcc atcaaataac gcacgcgcgg
    11281 aaaatcccag acgttacccg gtactttttg atgattgtat ggctgtggag gatttttgcg
    11341 ataatcgatc aacgcgcgct gcgatccggt tttggcttct accagaatag catcaccgtt
    11401 gaatgtgtag ttctttgcgt ctttcaccat catcaggatg gggtcgtaca tggagccgta
    11461 gtgttttttc gcctgtactc cagaactgtc atatgaccag acgatgcgac ttttgatggt
    11521 aaaaagcttg cggcactgga gatcgataaa gggcatgttt tccgtgctgt tcatgatgta
    11581 catgctgccc tgctttttca gaacgcggtg gcactctgca atcacttcaa acagccagtc
    11641 gataaacaga tcttctttcc aggcttcgat cagaccatca aaatttttac cgatgttata
    11701 tggtgggtcg gcaaagatca gatcgacact ttcggcgggg atctttttaa gttcggcaag
    11761 cgcatcaccg tgaataatgg tcttagcttc attaccaaac cgggtcggtt cacatcctgt
    11821 tctcatggtc actccctttg tgacacctat aaaaaaggcg cttccccatg ccgagtagcg
    11881 cctttttaat caagcattta gctaacctga attagttcat gccgtatttt ttcaattttt
    11941 tacgcagcgt accacggttg atgcccatca tcagcgcagc acgggtctgg ttaccacggg
    12001 tgtattgcat caccatgtcc aacaggggct gttctacttc agccagtacc agctcataga
    12061 ggtcattcac atcctgacca ttcagttgag caaaatagtt cttcagtgcc tgtttaaccg
    12121 agtcacgcag gggtttttgg gttacctgat cctgagagtt aacggtagaa acggtcagta
    12181 cgtcagaatt tacgcgttgt tcgaacatag ttctgtcagc tctttatttc tgtttacgca
    12241 aaattttcga agtatgcctc caacgcctcc agctgttcgc tggcatcctc aatggcgttg
    12301 aatgtgcgcc gaaactggtc atttggagcg tgttcctgga gataccagga aacgtgttta
    12361 cgtgcaattc ggtacccttt tgccggacca taaaagtcat gcagttcccg aacgtgcgcg
    12421 caaagcaagc gcttaacctc tgccaaaggc agtgggggca gcaactcccc agtgtccaga
    12481 taatgctgga tttcccgaaa gatccagggt cttccctgag ctgcgcggcc tatcatcagg
    12541 gcatccgccc ctgtatagtc gagcacagct ctggctttaa gcgggtcagt aatgtcgcca
    12601 ttcgcgataa ccggaatgga aactttctgc ttaactgccc gaatactgtc gtactcagct
    12661 tctccattga acaaacaggc gcgtgtacgg ccatgaatgg tcagagcctg aatgccacag
    12721 tcttcagcca gttgggcaat ctcttcgcag ttacggtgtt ccggtgccca gccagtgcga
    12781 atcttcaggg taacaggaac gtccactgca ttgacgacct cggtaaggat cgatttaacg
    12841 acatccgggt actgcaagag ggctgaacct gcgagcttgc gattcacttt tttagccggg
    12901 caacccatat tgatatcaat aatctgggca ccgctttcca cgttaatacg tgctgcatct
    12961 gccatttctt tcggatcgct accagcaatt tgcacggtgc gaataccggg ttcatcaatg
    13021 tgcaccatcc gtaaacgaga tttgtcgctt tcccaaacct gtgggttaga agacatcatc
    13081 tcggatactg tcaatccggc tcccatctcg tagcacaacg tccgaaaagg tctgtctgta
    13141 atgccagcca tgggcgctgc gatcaggcga tttctgagct gatattgtcc gatgcgcatg
    13201 agttaagaaa tgaccatact gtgactgcaa ggcggcgtat attacgcatt ttttgcacga
    13261 gatgaaaggc caaactttga ccaatcctct gagatggatc aaagaattgc atttaaaatg
    13321 agcgtggtgc gataattact cataaaaatc atcatattag aaaatagtga ctaaaattta
    13381 cattcaaaga aatttgagta agttctcaat ttttctttat gaatgaaaat tttggcacgc
    13441 aaatttgcgt aaataaccgg caaatttacg tgccttttgt gagcttgctc gcacttcgcc
    13501 ccgcgtcacc ctacggcgat gcgaaggtta attcttacga ccggtaatac ggcaccactc
    13561 ttctttttcc acgaccgggt ccagtgcgaa gctatcggca taagcttcac aaacgctctc
    13621 tgcctggctt gccagaatac cggaaaggcc cagcaaaccg cctgaaaccg gcaggacgct
    13681 gattaacggt gccagttcac gtaatgggcc tgcaaggatg ttcgcgacca ccacgtcggc
    13741 tttcatttct tctggctgat ctttcggtaa gtagagttcc agacggtcag aaacgccatt
    13801 acgttcggcg ttgtcgcggc tagcctgaat cgcctgcgga tcgatatcaa taccaatggc
    13861 ttttgctgca cccagtttca gcgccgcgat agccagaatg ccggaaccgc agccaaagtc
    13921 gatgactgtt ttaccagtta aatcgaggct gtcgagccat tgtaggcaca gagaggtagt
    13981 tggatgggta cccgtaccaa acgccagccc tgggtctaac atcacgttga cggcgttttc
    14041 gtccggcaca tcacgccagc ttgggcagat ccacagtcgt tcaccaaagc gcatcgggtg
    14101 gaaattatcc atccattcgc gctcccagtc tttatcttcc agttgttcga ttttatgcgc
    14161 gaagcctgcg ccgagcagcg gatggttttc cagaatcgcc accacgtcgt tcatatcggt
    14221 ttcagcgtcg aacagaccaa tcacatcggt gtcgccccac aggcgcgttt cgcccggcag
    14281 cggctcaaat actggcgtat cgtgggtatc ctgaaaagtg atagaaacgg cacccgcttc
    14341 catcagcgca tcgctaagat cttcagcgtt cgcgccggtg gtgttcagtt tcagttggat
    14401 ccaaggcatg gcaaaactct ttatttatca gtagtcaaaa cggtagcttg cgggacggat
    14461 gtaccgaaac ggtttccgac caggaaagcc agcaaactta gtagtaacga gggcacgata
    14521 gggtggaagc ccaggtactg aatattcagc gtcgcgagta cggcatacag cacgccgcca
    14581 acgatcatcg cacttagcgc gcctttggcg ttggcgcgtt cccagtaaag acccagcacc
    14641 agcggccaca ggaaaacggc ttccaaccca ccgaaggcca gcaaattcag ccagatgatc
    14701 atttctggcg gcttccaggc ggcaagcagc agcaacgcgc cgagaactaa cgtaattacc
    14761 gccgacatcc gcttcagacg cgtctcgttt tgcatttgat ccggacggat attcagatag
    14821 agatctttaa tgatcgtagc ggaactttgt agcaattggg cgttaattgt cgacatgatc
    14881 gcagccatag gtgcagccag aaagatcccg gcagcaaacg gtggcagcac ttttaccatt
    14941 aacgtcggga tcaccagatc cggtacggtg agatcgggga tcactgcacg acctaacgct
    15001 ccggccaggt gcataccgaa catcaggatt gcgactacaa tcgtaccgat gatgatcccc
    15061 cggtgtaccg ctttgctgtc tttataagag atacagcgca ccgcagtatg cggcaggcca
    15121 atcacgccaa agcacaccag tacccagaac gacgtcataa aggcaggcga cagaatatcg
    15181 tcagcgcctt gtggcgtaac cagttgcgga tcgatggttt gcagcgtctc taccgcatta
    15241 cttaaaccac ctgcggcatg taccacgcca ataagcagca caacggtgcc aatcagcatc
    15301 acaagccctt gcatggtgtc gttcagcacg ctggcgcgaa agccgccaaa ggcggtatac
    15361 aacgcaatgc tgataccgaa aatcagcagc ccggtttcat aaggaatacc cgccgcggtt
    15421 tccagcaggc gcgcaccgcc gataaactgc acggtcattg ccccaacgaa cgcaaccagc
    15481 aaactcaaac tcgccagcca caccagaaga cgactctggt agcgggcaaa cagcatgtcg
    15541 ttcagcgtca ctgcattgta gcggcgcgca agaatcgcga acttcttgcc gagaataccg
    15601 agcgaaagcc agactgcagg aagctgaatc atcgccagca atacccaacc caggccgtat
    15661 ttataagcag ctccaggccc gccgataaac gaacttgcac tgatataggt cgcggtgagc
    15721 gtcatcgcca gcacaatacc gcccatagag cggctgccga ggaaatactc attaaggaag
    15781 gtaccggtgc tccgtttacg catcgcataa acagagatac cgaacaccac caccagatag
    15841 gcgaccagcg gtagaatcac ttcaagctgc atcgtcatcc tccagtggga tatcgcgata
    15901 gataaatttc accatcgccc agcacagtcc aataaacagc agcggcgtca ggatgcaggc
    15961 catctcaaac cagcgcggaa agccggtaaa accgggggca acgtcaggta agtaagcggc
    16021 tgctaaccaa actgccagat acaaaagggt cagccccagc gcccagcgcg cctctttatg
    16081 ggcctgaaca aaacgagtgt ccacggaagg gttcctcctc atggggggat acgagaaacg
    16141 ggcaattcta cggcaactct tcaggcaggg aaaataatct gacagaaaat tgccgttcag
    16201 tgctgctgca aaaagtcttc aatgtcagcc agtgaggata tcccttccat cggaccttgc
    16261 cgcattacgg cgagcgcgcc gctggcattt gcatattgca gtgccttatg tgccgggaaa
    16321 ccggataaga aaagagtgat aaacgttgcg ccaaagcagt cgcctgcacc cgttggatcg
    16381 ataatttcga tatcgtggcc tgtaacatgc tgggcgtgta atgtaccgtt tttaagcttg
    16441 taatagctgg ccccacgctg ggcgcgtttt atcgccacat gttttacgcc gccgtggaga
    16501 agatcgctaa caatctgttc ttctgacaga tttttgtgac gcgcgaagaa agggagttcg
    16561 ctttcgctgg ggatgaaaat atccgtatat tcaatcaaat aatcgagagc ctgcgccatt
    16621 tcaggaatgc tcagcatctc tttgcgaata ttgggatcga aagaaacggt gccgccagcc
    16681 gatttgatcg tcgttattgc tttacgcatg acatcgatca tgcgaaatga gaacaatgat
    16741 gagcccacaa tatggagatg gttacactgt tttagcagat ccttatcaat gtgctcagca
    16801 gtaaacaagc cgcaggcgct gttagggata ttaaagacga aatcgcgctg ctggggattt
    16861 tgataactca cgaacgccgt acctgtgacg gcattgttca taacatggat cccatcggta
    16921 atgacacctt catgacggag gcgctctata atgagtcggc caaaatcatc attaccaaca
    16981 catccgaaga agatggcccg atgggacagt tttgccacct gagcagcaaa aattgctggc
    17041 gcaccgctgg gaaatggccc gataaactcc ccaggctgag tgaatttttg atgtgggttg
    17101 cgggacaaaa actcggccag caattcgccc atagcgcaga tagttattgt cacaaaaccc
    17161 ctctcattcc tgaagccttt cgcgattgga ccaggtaaag cactcattac tggtataaag
    17221 gataacgaaa tcagccgact gcaattgttg ctgatattgt tcgttaatgc tgcggctgac
    17281 gatcacattt tctgcctgat gcaaatgccc gatagcagcc gttgatggcg caggatcggc
    17341 ggcaacgata accgtcttat tctgggcatg atcgaaacag agctgccagg cagcggccag
    17401 tctgggaacg ttgatattta aagtaccatc agcatccaga tggttgattt ccagaatgct
    17461 atgtgtaatg gtgaaatgct gaagtgcctg ttcaagcggt tttccggcca gtgcggtgtc
    17521 ggggcgcagc atttcactgc cagccagtat tatttcgcca tcaataaact gatttgccag
    17581 cagcgcatgt tcgggatcgt tggtgatcag acgcagtttt ttcacttcgc tgagcaatgg
    17641 aatgatctta cggcagattg tcccatgtcc aagaaatagc gtgtcacgat cgcgaattaa
    17701 ccgtgcgcaa tgtcgtgcta tttccatttg ttgtgccaga gacaatggcg cgatcggttg
    17761 tatcgcttct ggttcagagg agagtggtgt cgcaatagca ccgccaaatg atcgctttaa
    17821 atatccctgt tgctccagat aactgagatc gccgcggatc gtcacgccag agacaccaag
    17881 ttgcgcagat aagtcatcaa ctttgatttc accttgggcg gcaacaattt ctgcaatttt
    17941 taatctgcgt ttcagtaggt tagacgattt tctcggcacg ttaacactct tcattggcct
    18001 ttaatgcgta acactatagc cccttgtatt tttctttgaa agttatcctt caataatatc
    18061 gacaattcga aaagaaaatc atgggtcaaa aatcgcaaca aaaatagatt aattcattga
    18121 aaaataaatg aatttattca tatttatgca gagatgttat tggtttcact tgtaaagtga
    18181 aaaacaaatt aagttatttt tttgtaagtt attttgatga tattcgacat gtatcacgct
    18241 ttttgccgct tttgctgtgc tagtttgctt tcaaaatgaa agtgaatatt ctctttcttc
    18301 attttgtaag gcgaacgaca aataacagga gctgcgatgt acatcatttc aagcaaaaac
    18361 atgctgaaaa aagcccagtc agagggatat gccgtccccg ctttcaacat tcataacctt
    18421 gaaactttac aggtagttgt tgagagcgct gcacaacttc gctctcccgt tatgctggcg
    18481 ggaacacccg gtacttatcg ttatggtggc gtgggaagtt taatttcgtt agtacaatcg
    18541 ctggctcgcg agtacaacct gccgttagtc ctgcatctcg accatcatga agagagtgat
    18601 gacattttta acaaggttcg cgcagggatc cgttctgtca tgattgatgg ctcccatttg
    18661 ccatttgaag acaacattgc gcgagtgcaa gaagttacca ccttttgcca tcgctttgat
    18721 gttagcgttg aggccgagct agggcgtctt ggcggccagg aggacgatct gctggtggat
    18781 gaaaaagatt ccgcttatac ctcaccagcc gcagctgcag agtttgttca acgtacccaa
    18841 attgactccc tggccgtagc aatcggcaca gcacatggtt tatatgcgca tgaaccacga
    18901 ctggattttg tgcggctgga acagattcgt cagcgagtgg agattccact ggtgttgcat
    18961 ggtgcttcgg gcttatcaga acaggacgtt cagcactgta ttcgccgcgg tatttgtaaa
    19021 gtgaatgtcg cgacagaatt gaaaattgcg tttgccgatg cgttaaaagg atatttctac
    19081 aacaatcctg cggcaaatga tccacgccac tatatgcagc ccgcaaaggc cgccatgaaa
    19141 gaagtcgtaa ctcgtattat tggtgtctgt ggtagtgaag gaaaaattta agacgttgta
    19201 ccctacaaaa acaatgagga ttgtttatga aaaatattaa attacttggt tcagctatgt
    19261 tggtgagcct ggcattgttc tcgcaaaatt cgttggcaaa agagtataaa attggtgcgt
    19321 cattattaac acagcaacat cctttctata ttgatcttgc gaatgccatg aaagaagagg
    19381 caaaaaaaga caatgtcaat ttaagtgtct
//
LOCUS       DADKRT010000073        19367 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.074, whole genome shotgun sequence.
ACCESSION   DADKRT010000073 DADKRT010000000
VERSION     DADKRT010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19367
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.074"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(31..1860)
                     /gene="glmS"
                     /locus_tag="JQ356_002138"
     CDS             complement(31..1860)
                     /gene="glmS"
                     /locus_tag="JQ356_002138"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HAY4622226.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIMVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(2022..3392)
                     /gene="glmU"
                     /locus_tag="JQ356_002139"
     CDS             complement(2022..3392)
                     /gene="glmU"
                     /locus_tag="JQ356_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HAY4622227.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQESNTGILISNGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDVNLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            complement(3743..4162)
                     /gene="atpC"
                     /locus_tag="JQ356_002140"
     CDS             complement(3743..4162)
                     /gene="atpC"
                     /locus_tag="JQ356_002140"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HAY4622228.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQSGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(4183..5565)
                     /gene="atpD"
                     /locus_tag="JQ356_002141"
     CDS             complement(4183..5565)
                     /gene="atpD"
                     /locus_tag="JQ356_002141"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HAY4622229.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(5592..6455)
                     /gene="atpG"
                     /locus_tag="JQ356_002142"
     CDS             complement(5592..6455)
                     /gene="atpG"
                     /locus_tag="JQ356_002142"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HAY4622230.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHLYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(6506..8047)
                     /gene="atpA"
                     /locus_tag="JQ356_002143"
     CDS             complement(6506..8047)
                     /gene="atpA"
                     /locus_tag="JQ356_002143"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HAY4622231.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(8060..8593)
                     /gene="atpH"
                     /locus_tag="JQ356_002144"
     CDS             complement(8060..8593)
                     /gene="atpH"
                     /locus_tag="JQ356_002144"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HAY4622232.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(8608..9078)
                     /gene="atpF"
                     /locus_tag="JQ356_002145"
     CDS             complement(8608..9078)
                     /gene="atpF"
                     /locus_tag="JQ356_002145"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HAY4622233.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(9140..9379)
                     /gene="atpE"
                     /locus_tag="JQ356_002146"
     CDS             complement(9140..9379)
                     /gene="atpE"
                     /locus_tag="JQ356_002146"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HAY4622234.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(9426..10241)
                     /gene="atpB"
                     /locus_tag="JQ356_002147"
     CDS             complement(9426..10241)
                     /gene="atpB"
                     /locus_tag="JQ356_002147"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HAY4622235.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(10250..10630)
                     /gene="atpI"
                     /locus_tag="JQ356_002148"
     CDS             complement(10250..10630)
                     /gene="atpI"
                     /locus_tag="JQ356_002148"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HAY4622236.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(11247..11870)
                     /gene="rsmG"
                     /locus_tag="JQ356_002149"
     CDS             complement(11247..11870)
                     /gene="rsmG"
                     /locus_tag="JQ356_002149"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HAY4622237.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI"
     gene            complement(11934..13823)
                     /gene="mnmG"
                     /locus_tag="JQ356_002150"
     CDS             complement(11934..13823)
                     /gene="mnmG"
                     /locus_tag="JQ356_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HAY4622238.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQ
                     HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(14202..14645)
                     /gene="mioC"
                     /locus_tag="JQ356_002151"
     CDS             complement(14202..14645)
                     /gene="mioC"
                     /locus_tag="JQ356_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HAY4622239.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLIISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(14735..15193)
                     /gene="asnC"
                     /locus_tag="JQ356_002152"
     CDS             complement(14735..15193)
                     /gene="asnC"
                     /locus_tag="JQ356_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HAY4622240.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQHPIMRTIKP"
     gene            15345..16337
                     /gene="asnA"
                     /locus_tag="JQ356_002153"
     CDS             15345..16337
                     /gene="asnA"
                     /locus_tag="JQ356_002153"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HAY4622241.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYLDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(16342..17793)
                     /gene="viaA"
                     /locus_tag="JQ356_002154"
     CDS             complement(16342..17793)
                     /gene="viaA"
                     /locus_tag="JQ356_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HAY4622242.1"
                     /translation="MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKA
                     AITDDVPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRL
                     NSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQ
                     ERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQ
                     LGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGG
                     FNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGG
                     TDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(17787..19283)
                     /gene="ravA"
                     /locus_tag="JQ356_002155"
     CDS             complement(17787..19283)
                     /gene="ravA"
                     /locus_tag="JQ356_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HAY4622243.1"
                     /translation="MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFL
                     LGPPGIAKSLIARRLKFAFQNARALEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTS
                     GYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEA
                     DSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKE
                     IGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVD
                     LILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKT
                     ALTVIRLGSIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLS
                     KGGEIRGKLNGIGFAQKLNLEVDSTQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQL
                     EELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC"
BASE COUNT         4627 a         5118 c         4850 g         4772 t
ORIGIN      
        1 tcggcagccc ttttttatct atgatagtga ttactcaacc gtaaccgatt ttgccaagtt
       61 acgcggctgg tcaacgtcgg tgcctttgat cagcgcgaca tggtaagcca gcagctgcag
      121 cggaacggtg tagaagatcg gtgcaatcac ctcttccaca tgcggcatct cgatgatgtg
      181 catgttatcg ctacttacaa aacccgcatc ctgatcggcg aagacataca actgaccgcc
      241 acgcgcgcga acttcttcaa tgttggattt cagtttttcc aacagttcgt tgttcggtgc
      301 aacgacgata accggcatat ccgcgtcaat cagcgccagc gggccgtgtt tcagctcgcc
      361 agcagcgtag gcttcagcgt gaatgtagga gatctctttc agcttcaatg cgccttccag
      421 tgcgattggg tactgatcgc cacggcccag gaacagtgcg tgatgtttgt cagagaaatc
      481 ttctgccaga gcttcaatgc gtttgtcctg agatagcatc tgctcaatac ggctcggcag
      541 cgcctgcaga ccatgcacaa tgtcatgttc aatggaggca tccagacctt tcaggcgaga
      601 cagcttcgcc accagcatca acagcacagt taactgagtg gtgaatgctt tagtggacgc
      661 cacgccgatt tccgtacccg cgttggtcat cagcgccaga tcggattcgc gcaccagaga
      721 agaacccgga acgttacaga ttgccagcga accaaggtaa cccagctctt tcgacagacg
      781 caggcccgcc agggtatccg cggtttcgcc agactgtgac aaggtgatca tcaggctgtt
      841 acgacgcacg gcagatttac gatagcggaa ttcagaggcg atttcgacgt cgcacggaat
      901 acctgccagc gattcaaacc agtagcggga aaccataccg gagttataag aagtaccaca
      961 ggcgaggatc tgaatatgct caaccttcga cagcagttcg tcggcgttcg gtcccagctc
     1021 gcttaaatca acctgaccgt ggctgatgcg cccagtaagg gtgtttttga tcgcgttcgg
     1081 ctgttcgtag atctctttct gcatgtagtg acggtaaata cctttatcgc ccgcgtcata
     1141 ttgcagattg gattcgatat cctgacgttt tacttccgcg ccagttttat cgaagatgtt
     1201 taccgaacgg cgagtaattt ccgcaatatc gccctcttca aggaagataa agcgacgggt
     1261 caccggcagc agcgccagct ggtcagaagc gataaagttt tcgcccatac ccaggccaat
     1321 caccagcgga ctaccagaac gtgccgccag cagggtatcc gggtgacggg agtccatgat
     1381 cactgtaccg tacgcaccgc gcagctgcgg gatagcacgc agaacagcct cacgcagagt
     1441 cccgccttgt tttagctccc agttcaccag atgggcaatc acttcggtgt cggtttcaga
     1501 aacgaaggta tagccacgcg cttttaactc ttcacgcagc ggttcatggt tttcgatgat
     1561 gccgttatgc accaccataa tgtgttcaga aacatgcgga tgcgcgttag cttctgaagg
     1621 ttcaccgtgg gtcgcccagc gagtgtgagc aataccggtg ccgccatgca gaggatgttc
     1681 ttccgctgcc tgagccagca tctggacttt accgaggcga cgcaggcggg tcatatgacc
     1741 ttccgcatca acaacggcca gaccagcaga gtcatatccg cggtattcca gacgacgtaa
     1801 accttcaaga aggatttctg ctacatcacg ttgcgcgatc gcgccaacaa ttccacacat
     1861 agtttttgat tccgatttat atcgttgtcg gtcaacctgt atgcccgttt tttcgggcgc
     1921 cccgagcctt gtagagagtg gggttatttt tatagttact gcttgtggga gggagattat
     1981 gttatctcct catcccagat gaccggatta cccggccaga attacttttt ctttaccgga
     2041 cgacgccagc cttctttctg agtctgcggc acacggctga tagctaatgc attttcgccg
     2101 acattacgcg tcacagttgt acccgcagca atggtcgcgc ctttgcctac tgttaccggg
     2161 gccaccagct gagtgtcgga accgacaaac acatcgtcgc cgataatggt cttaaattta
     2221 ttcgcaccat cgtagttgca ggtaatggtt cccgcgccga tgttaacgtt atcgccaatt
     2281 tccgcatcgc ccaggtaagt cagatgacca gctttcgagc ctttacccag acgcgctttt
     2341 ttcatctcaa caaagttacc gacgtgtgca ccttccagca actcagcacc aggacgcaga
     2401 cgggcaaacg ggccaatagt acaggccgct gccagattca cgtcttccac aacggtatac
     2461 ggactgattt cgcaatcatc gccaatcacg ctgtttttaa tcacgcaacc ggtgccgatt
     2521 ttcacgcgat gaccgagagt cacgttgccc tcgatgataa cgttagtatc aatttcaaca
     2581 tcgcgcccgt gagtaagcgt accgcgcaga tcaaaacgcg ccggatcgcg cagcataacg
     2641 cctgctaaca gcagtttttc agcctgttcg gactggtaaa cgcgctccag acgggagagt
     2701 tgcaggcggt tattcacacc ttctacttcg cttaaacgtt gcggatgaac ggcgacgatt
     2761 tcacgccctt cctgatacgc cagcgcaata atgtcggtga tgtagtattc gccctgagca
     2821 ttattgttgg tcagcttcgc cagccagcgt ttcatatctg cgccgttaga gatcagaatg
     2881 ccggtgttgc tctcctgaat ctgacgctgc tcgtcggtgg catctttgtg ctcaacaatg
     2941 ccggtaactt tgccattttc acgggtgata cgtccataac cggtcggatc atccagtttc
     3001 accgtcagca gaccaatgcc accctgcggt ttagcatcac gcaggcgctg gagtgtttcg
     3061 acagagatca gcggcacgtc gccgtagagc attaaaatgt cttcatcatc ggcaaagaaa
     3121 ggtgcggcct gctgcattgc atgacccgta cccagctgct ctgcctgaag cacccagtta
     3181 aggttgtcgt ctttcagcgc ctgtttaagc agatcgccgc cgtgaccgta caccaggtga
     3241 acgtgcgctg cgcctaattc attcgcagca tcaataacat gctgaaccat cgctttcccg
     3301 gcaagggtat gcagcacttt cggaagatcg gaatacatgc gcgtgccttt gcctgcggca
     3361 aggatcacta cgctcatagc attattcaac atacgcgtcc tgactgtaat ttgagaacga
     3421 atttaaaccg cttcaccttg aaaaaactac atttttttca tcgtgaaatg gacagaggat
     3481 aaattgttca ataacggatt atccccgctg acgaaagtgc cattttcgac catcgtcacg
     3541 ccttttgtct gcagaaaatt aaggcagtac cttcatttaa gcgtcaggtg gatgtttttg
     3601 ctcttatttc gatcaatgaa taaacgggaa aacaggggtg ttttatatca gcaggatcta
     3661 tgtgaacgct cttcaggacg gatcacgcgt aaaaaaaaac cagcctgttt ccagactggc
     3721 ttttgtgctt ttcaagccgg tgttacatcg cttttttggt caactcgata acgcgcagct
     3781 gcgcgatcgc tttggccagt tccgcagacg cctgagcgta atctacgtcg ccgtgagagc
     3841 tgctaatgtg ctcttcagcc ttacgtttcg cttccatggc tcgcgcttcg tcgagatcct
     3901 ggccgcgaat tgcggtgtcg gccagaacgg tcacgttgcc agactgcact tcaagaatgc
     3961 cgccagacag atagataaac tcttcgtgac cgtgctgttt cacgatgcga atcataccag
     4021 gcttaatggc ggtgagcagc ggtgcgtggc cagggtagat ccccagttca ccttcgctac
     4081 ccgttacctg gattttctcg accagaccag agaacatttg ttgctctgcg ctgacgacgt
     4141 ccaggtggta agtcattgcc atatcaccct ccgattaagg cgttaaagtt ttttggcttt
     4201 ttccacagct tcttcgatgg aaccgaccat gtagaacgcc tgctccggca ggtgatcgta
     4261 ttcgccttcc atgatgcctt taaagccacg gatggtgtct ttcagggaga cgtatttacc
     4321 cggagaaccg gtgaatactt ctgccacgaa gaacggctgg gacaggaagc gctggatctt
     4381 acgagcacgc gctaccacca gtttgtcttc ttcagacagt tcatccatac ccaggatggc
     4441 gatgatgtct ttcagttcct gataacgttg caggatggac tgaacgccac gcgcggtgtc
     4501 gtagtgttcc tgaccaacca ccagcgggtc cagctgacgg ctggtggagt ccagcgggtc
     4561 aacggccggg tagataccca gagacgcgat ctgacggctc agtaccacgg ttgcgtcaag
     4621 gtgcgcaaag gtggttgccg gagacgggtc agtcaagtca tccgcaggta cgtataccgc
     4681 ctgtacggag gtgatagaac cagttttggt ggaggtgata cgttcctgca gaacgcccat
     4741 ctcttccgcc agggtcggct gataacctac cgctgaaggc atacggccca gcagtgcgga
     4801 tacttccgta ccggccaggg tgtaacgata gatgttgtca acgaacagca gaacgtcacg
     4861 accttcgtca cggaatttct cagccatggt cagaccggtc agagcaacgc gcagacggtt
     4921 tcccggcggc tcgttcatct ggccatacac cagggatact ttgtcgataa cgttggagtc
     4981 ggtcatttcg tggtagaagt cgttaccctc acgagtacgt tcacctacgc ccgcaaacac
     5041 agagtaaccg gagtgctcga tcgcgatgtt acgaatgagc tccatcatgt ttacggtttt
     5101 acctacaccc gcaccaccga acagaccaac tttaccgccc ttagcgaacg gacacatcag
     5161 gtcgataact ttgataccgg tttccagcag ttcctgagag tttgacagct cttcgtagga
     5221 aggtgctgcg cggtgaatcg cccaacgctc ttcttcaccg atctcgcctt tcatgtcgac
     5281 cggttcaccc agtacgttca tgatacggcc cagagtcgct ttacctaccg ggacttcgat
     5341 cgggtgttcg aggtctttta catccagacc gcgacgcaga ccgtcggagg aacccattgc
     5401 gatggtacgc acgataccgc cgccgagctg ctgctgaact tccagcacca gacgctcatt
     5461 accattttgc acctcaagag catcgtacac gcgcggtacg gcatcctgag ggaattcgac
     5521 gtcaactacg gcgccgatta cctggacaat ctttccagta gccatcttaa atcctctacg
     5581 aaataacctg tttaaaccgc ggcggccccc gagacgatct cggtgagttc ctgagtaatg
     5641 ctggcctgac gagctttgtt gtataccaac tgcagctctt taatcaggct gccgccattg
     5701 tcggtcgcgg ctttcatcgc caccatacgg gcggcctgct cgctggccag gttttcaacc
     5761 acgccctgat aaacctgaga ttcgacataa cgacgcagca gggtatccag caacgccttc
     5821 ggatcgggtt cgtacaggta atcccaggat ttatgtttca gatcatcatc atctgatgcc
     5881 ggtaacggca gcagctggct gatggtcgga acctgagaca tggtgttaat aaatttgttg
     5941 ctgacaatgt aaagcttgtc cagacggcct tcgtcgtagg cctgcaacat cacttttacc
     6001 ggaccgatca gttcggacag ggaagggtta tcccccatgc cggtgacctg ggcaacaaca
     6061 ttgccgccca cggagttgaa gaacgacacg cctttcgagc cgatcattgc gaggtcgcat
     6121 tgaacgcctt tgtcggtcca ggtcttcatt tccgccagca gttttttgaa caggttaatg
     6181 ttcaaaccac cgcacaaacc acggtcggtc gacaccacca ggtagcccac gcgtttaacg
     6241 tcgcggtctt ccaggtaaag gtgcttatat tccagattac catgtgcaag gtgaccaatc
     6301 actttgcgca tggtttctgc ataaggacgg ctggccgcca tgcgatcctg cgatttacgc
     6361 attttggaag cggcgaccat ctccatcgct ttagtgatct tttgcgtgtt ctggacgctt
     6421 gcgatcttac tacgtatctc ttttgcgccg gccatgagct tctcctcaat gccttgcggc
     6481 ctgccctaag gcaagccgcc agacgttacc aggattgggt tgctttgaag gaatcgagga
     6541 tgcctttcag tttgccttcg atttcgtcgt tgtagccacc ggtctggttg atctcttgca
     6601 tcaacggagc gtgatcacgg tcgacgtaag ccagcagagc ggcttcgaag ctgccaattt
     6661 tcgacagttc aacatccgcc aggtaaccac gttctgctgc gaacagaacc agagactgct
     6721 gcgcaacgga catcggcgca tactgtttct gtttcagcag ttcggtcact ttctgaccgt
     6781 ggtcaagctg cttacgtgtt gcatcgtcaa ggtcggatgc aaactgagag aacgctgcca
     6841 gttcacgata ctgtgccaga gcggtacgga taccaccgga cagttttttc atgatcttgg
     6901 tctgtgctgc accaccaaca cgggatacgg aaatacccgg gttaaccgca ggacgaatac
     6961 cggcgttgaa caggttggtt tccaggaaga tctgaccatc ggtaatggag attacgttgg
     7021 tcggaacgaa cgcagaaacg tcacccgcct gagtttcgat aatcggcagt gcggtcagag
     7081 aaccggtttt ccctttcact tcacctttgg tgaaggcttc aacgtattcg gcgttaacac
     7141 gtgcagcacg ctccagcaga cgagagtgga ggtagaaaac gtcgcccggg aatgcttcac
     7201 gtcctggcgg acgacggagc agcagggaga tctgacggta agcaacagcc tgtttagaca
     7261 ggtcatcgta aatgatcagc gcatcttcac cgcggtcacg gaagtattcg cccattgcgc
     7321 aaccggcata cggtgccagg tattgcagtg cagcggattc agacgcggtt gctaccacaa
     7381 cgatggtgtt agccagtgcg ccgtgctctt ccagtttacg taccacgtta gaaatggtgg
     7441 acgctttctg gccgatagcg acatagatac atttgatacc ggaatcgcgc tggttgatga
     7501 tggcatcgat agccagtgcg gttttacctg tctgacggtc accgatgatc aattcacgct
     7561 gaccacgacc gattgggatc atggagtcaa cggctttata accggtctgt accggctgat
     7621 ctacggactg acgttcgata acgcccggag cgattgcttc tacagcagag aagccgtcgt
     7681 gatccagcgg acctttaccg tcgattggtg cacccagagt gttaaccaca cggcccagca
     7741 ggccacggcc aaccggaact tccaggatac ggccagtaca cttaactttc atgccttcgg
     7801 caaggtcagc gtacggaccc ataacaaccg cacctacaga gtcgcgctcg aggttcagtg
     7861 cgatagcgta acggttaccc ggcagggaga tcatttcacc ctgcatacaa tcggccaggc
     7921 cgtgaatgcg gataacaccg tcacttacag aaacaatagt accttcgttg tgagcttcac
     7981 tcacaacatt gaactgagca atgcgctgct tgatcagttc gctgatttcg gtggaattca
     8041 gttgcatgct ccagtcccct taagactgca agacgtctgc aaggcgctca agacgaccgc
     8101 gtacgctgcc atcaatgacc atatcacccg ctcggatgat aacgcctgcc attacagact
     8161 tatcgatttt gcaattcagc ttaactttgc gtgacagacg tttttccatc gcagcagaaa
     8221 ttttcgcgag ctgttgttca ctcagtgcgg cagcggaaat gacgtctacc tcagcggtag
     8281 cctcactcac ggcacgaagg tgaataaact gctccagaac atccgggagc gcgttaagac
     8341 gaccattttc agccattacc cgaatcaggt tctgaccgtt ttcgtccagt tgctcaccac
     8401 aaactgcgat aaacgactcg gcgagcgttt ctggcgcaag cgcgccagag agaagctctg
     8461 ccatttgttc gtttttggtt acctcggcgg caaacgccag catgtcctgc cagcgttcta
     8521 cactttggtg ttcgacggca aagtcaaaag ctgctttggc gtaggggcga gctaccgtaa
     8581 taaattcaga catcagcccc tccctcctta cagttcagcg acaagtttat ccacgatgtc
     8641 gctgttagca gcttcatcca cggaacgttc gatgatcttc tcggcgccag caacagccag
     8701 gatagcaact tgcttacgca gctcttcacg ggcacgttta cgctcggctt caatttctgc
     8761 ctgcgcctgg gccacgattt tagtacgttc ctgttctgcc tcagctttcg cttcgtccag
     8821 aatctgcgag cggcgtttgt tcgcctgctc gatgattacc tgggcttccg ctttcgcttt
     8881 tttcagctgg tcggtcgcgc tggcctttgc aaggtcaagg tccttatgtg ctcgttctgc
     8941 ggaagcaagg ccgtcagcaa tttctttttg acgtttttcg atggctgcca ttaatggcgg
     9001 ccatacgtac ttcatgcaga acagaacgaa caggacaaac gcgatggcct ggccgaggat
     9061 tgttgcgtta agattcacag cacaatgcct ctatttagtt aacgttctga tattgctctt
     9121 taaataaaag caacgcttac tacgcgacag cgaacatcac gtacagaccc agacctacag
     9181 cgatcatcgg gatagcatcc accagaccca taacgataaa gaactgagta cgcagcagag
     9241 gaatcagatc aggttgacgc gctgcgcctt ccaagaattt acccccgagg atgccgatac
     9301 cgatcgcagc accgattgcc gccagaccca tcatcacagc ggcagccatg tacagcagat
     9361 ccatattcag gttttccatg acagtctcca gtttgtttca gttaaaacgt agtagtgttg
     9421 gtaaattaat gttcttcaga cgccatcgac agatagacga tcgtcagaac catgaagatg
     9481 aaggcttgca gcgtaatgat caggatgtgg aaaatggccc acggcacatt caggatccac
     9541 tgtgaccacc acggcaacag accagcaatc agaatgaaaa tcagctcacc ggcatacatg
     9601 ttaccgaaca gtcgcaaacc gagtgaaact ggtttggaca gcaggcttac cccttcaagg
     9661 attaagttga caggaatgaa cgcccagtga ttgaacggct gcagcgtcaa ctctttcgtg
     9721 aagccgccga tgcctttcat tttgatgctg tagaacagaa tcaggataaa tacgcccaat
     9781 gccatagaca gcgttacgtt cacgtccgca gacggaacca cacgcagtgc aggcagaccc
     9841 agtacatgtt cagcaatgta cggcagcagg tcgataggca gtaaatccat caggttcatc
     9901 aggaataccc agacgaagat cgtcagggcc agcggagcaa tcagcttgct tttgccatgg
     9961 tacatgtctt tcacgctacc attaacaaag ccgatcacca gctcaatcgc ggtctgaaac
    10021 ttacctggca caccgctggt cgcctttttg gctacgctac ggaataaaac caggaacaac
    10081 agacccagca ccaccgagaa gaacatggag tcaatattga ttgtccagaa ggtggctggg
    10141 gggttttgtg gatccaccag cgagaatgta cgcaggtcca gctgaaggtt attcaggtgg
    10201 tgtcctatgt aatcctgcgg cgtcatattt tctgaagcca tgatgccttt taccctttgt
    10261 tgttaattac agccggtgcc agtatctgaa ccaccagcac caaaacccac gtaacgatca
    10321 gcggcaagaa taccgccttt aaaaccgcca acgccaccac cagtaacacc aacatcgcca
    10381 gaactttgaa agcttcgcca aatgcgaatg tccaggccac ccggcctttc gctggtgtat
    10441 gcgcctggtg acgccaggca aatatcataa acaaaacgtt aggcagaaag actgccaggc
    10501 ccccgcttat tgcagagacg ccccagaagg ggtctttgag gctgaacagc aatccacttg
    10561 ctatcaccac cagtaactga acgagcagaa gcttccgagc aacgtttcga ctcacgagcg
    10621 acacagacat cacgtttttt actcctgctc ccttcgaggt atgccgcgtg tcgtataaaa
    10681 ctttctttaa ggcttagagt caagcatcaa aaagcggtca aattatacgg cgcgcccccg
    10741 tgatttcaaa caataagtag ccaaaaggtg aataaatgtt taaatatttt tccagtgcat
    10801 acaattgcga cttttctact aaccctgttc gatcatgaaa aactgtaaat aacgcgtaaa
    10861 cactggtgat aaagcgtgct tcagatcaca tattgcgcat gttcgcgcac agcatattta
    10921 tttacttggc aaatgatgcc tttgcaagtt tatgatattt cagtctaaaa acagatactg
    10981 ttttaataaa tgacatttac acaacaaaaa ccacccattg acatttttaa taatgtttta
    11041 gcagccaatg atggttctta gcgccgattt ttagcagact gatattttca ctaatgactt
    11101 attttctgct taccaaaaaa agccacgtta tcttgttgat gcaaaagagt gaacgtggcg
    11161 ttaaatgtaa ccagttatat cagtagaaaa cctggttgtt gttaacagtc taaccggtca
    11221 attttttatg atttttttga taaaaattaa attttatttg ctttaatcac caccagatga
    11281 cgttcgccat ccagggctgg aacctgaagt ttaaccactg attcgacctg atattcttcg
    11341 ggcaacaaag cgatttcatc ttccggcatt tgccctttca gcgcgtagaa acggccttgc
    11401 tcaccaggaa gatggtggca ccagctcacc atatcgttca gagaggcaaa agcgcggcta
    11461 attacgccat caaatggcgg ctctgaagga aactcttcta ccctgctctg tacaggttca
    11521 atattctcca gtttaagctc atgttgcacc tgacgaagga aacgcacgcg tttaccaagg
    11581 ctatccaaca gagtgaaatg ggcttcagga cgcacgatag agagtggaat gcctggcagt
    11641 cctggtccgg tgccgacatc gataaaccgt tcaccttgca gatacggtgc caccacaatg
    11701 ctatcgagaa tatggcgtac cagcatctca ttaggatcgc ggaccgaagt caggttgtac
    11761 gctttgttcc atttatgcag catattcacg taggcaataa gctggttttt ctggtgatcg
    11821 gtaagcgaaa tacctgcgtc tttcagcagt aaggagagtt tgttgagcac ggtgattacc
    11881 tgttcttgat gcgttgcctg gtaagcgggt gcttaccagg catttttaat gcgttatgcg
    11941 ctacgacgca gcataccctg ttttttcagc cacaccagca gaatggagat agccgcaggc
    12001 gtgacgccag aaatacgcga agcttggccg atagaggctg gtttgtgatc gttaagtttg
    12061 gcgatcactt cgttagaaag accggatacc tggcggtaat ccagtgtcgc gggtagcagg
    12121 gtgttctcgt tacgcagctg cttttcgatc tcatcttgct ggcgcgcgat ataaccttcg
    12181 tatttaacct gaatctcaac ctgttccgcc gcctgttcgt ctgtcaacgc aggggcaaac
    12241 ggcgtcagcg tggttaattt ttcataagtc atttccggac gacgcagcag atcttcacca
    12301 ctggcttcac gggaaagcgg cgcagtcagg tgagcattca cttcggctgc agcttccgcc
    12361 gacggggtta cccaggtcga tttcagacgc tgacgctcac gctcgatatt ctcaagtttc
    12421 tcgttaaagc gcgcccaacg ttcgtcatcc accaggccca gttcacgacc gatttcagtc
    12481 aaacgcagat ccgcattatc ttcgcgtagc atcagacgat attctgcgcg cgaagtaaac
    12541 atacgatacg gttctttggt tcctaaagtg cacaggtcat caactagtac gccgagatac
    12601 gcctgagaac gtgccggagc ccaaccttct ttgtcagcag acagacgggc agcgttaaga
    12661 ccggccagca aaccttgcgc agcggcttct tcgtaaccgg tagtgccgtt aatctgacca
    12721 gcaaagaaca gcccctggat aaacttgctc tccagcgtcg gtttcaggtc gcgaggatcg
    12781 aagaagtcat actcaatggc ataacccgga cgcacgatct tcgcgttttc catcccctgc
    12841 atagagcgga cgatttgcat ctgcacatcg aacggcaggc tggtggagat accgttcgga
    12901 taaatttcat tagaggtcag tccttccggt tcaaggaaga tctgatgctg atttctgtcg
    12961 gcgaagcgca tgactttgtc ttcgatcgac gggcagtagc gtgggccgac accttcgatc
    13021 acccctgcat acattgggct acgatcgagg ttactgcgga tcacatcatg ggttttctcg
    13081 ttggtatgag tgatataaca cggcacctgc tggggatgct gggacgcatt gcccataaac
    13141 gagaataccg gcattgggtt atcgccatgc tgttgcgcca gcacactaaa gtcgatagtt
    13201 cgagcatcaa tacgcggtgg tgtcccggtt ttcagacgac caacgcgcag cggcagttca
    13261 cgcaaacggc gagaaagcgg aatggacggc ggatcaccag cacggccacc gctgtaatta
    13321 tccagaccga tatgaatttt accgtcgagg aacgtcccaa cggtgagcac gactgctttg
    13381 gcacggaact tcagtcccat ttgggtaaca gcaccgacca cgcgatcgtt ttcgacaata
    13441 agatcttcaa ccgcctgctg gaagatcatc aggttcggtt ggttctccag cgccgtacgt
    13501 accgcctgac ggtagagcac acgatccgcc tgagctcggg tagcgcgaac cgccggtcct
    13561 ttgcttgcgt ttagtatcct aaactggata cccgcttgat cgatcgcttt cgccatcaga
    13621 ccgccgagtg catccacttc ttttaccaga tgtcccttcc caataccgcc gatcgccggg
    13681 ttgcagctca tctgccccag agtgtcgata ttgtgtgtca aaagcagagt ctgttgaccc
    13741 atacgcgccg cggccatcgc ggcctcggtg cctgcatgac ccccgccaat gatgatgacg
    13801 tcaaaaggat ccggataaaa catggtgatt gcctcgcata acgcggtatg aaaatggatt
    13861 gaagcccggg ccgtggattc tactcaactt tgtcggcttg agaaagacct gggatcctgg
    13921 gtattaaaaa ggagatctat ttatttagag atctgttcta ttgtgatctc ttattaggat
    13981 cgcactgccc tgtggataac aaggatccgg cttttaagat caacaacctg gaaaggatca
    14041 ttaactgtga atgatcggtg atcctggacc gtataagctg ggatcagaat gaggggttat
    14101 acacaactca aaaactgaac aaccgttgtt ccttggataa ctaccggttg aaccaagctt
    14161 cctgacagag ttatccacag tagaacgcac gatctgtata cttatttgag taaattaatc
    14221 cacgatccca gccattcttc tgccggatct tccggaatgt cgtgatcaag aatgttgatc
    14281 ttcagtgttt cgcctgtctg ttttgcaccg gaatttttga gttctgcctc gagtttatcg
    14341 atagccccac aaaaggtgtc atattcacga ctaccaatac cgattgcgcc aaagcggacc
    14401 gcagaaagat cgggcttctg ttcctgcaat gcttcataga aaggagaaag gttgtccgga
    14461 atatctccgg caccgtgggt ggagctgata atcagccaga tccccgaggc agataaatct
    14521 tccaacagcg gaccgtgcag cgtttcggtg gtaaaacccg cctcttccag cttttcagcc
    14581 aggtgttctg ctacatattc ggcaccgccg agggtgctgc cgctgataag agtgatatct
    14641 gccataaacc gccaccttta ttaagagtgg cgtattgtac gctgtgaacg cgttgggatc
    14701 tacctgtgga aaagtatggg attaaaaaag ccgatcaggg cttgatagta cgcatgatcg
    14761 ggtgttgcag gacgatcaat gtctcggtgg actgaatttc atcaattgtt tggatcttgt
    14821 tgataagtac atgctggaga gcgtcgatcg aacggcacat tacttttata aagatgctgt
    14881 agtggcctgt tgtgtaatag gcttcagtga cttcatcaag gctttccagc tttgccagcg
    14941 cggaagggta gtctttggcg ctctttaata taatgccgat aaagcagcct acgtcataac
    15001 cgagctgctt cgggctgaca tcaatacgcg ccccggtaat gatccccgcc tgcttcattt
    15061 tctctacccg aacgtgaatc gtccccggac tgacgccaaa ttgtttcgcc agttcggcgt
    15121 aagcggtgcg cgcattgccc attaatgctt ccaggatgcc acggtccaga ttgtcgatca
    15181 gataattttc cataggattt tcttatgcag attgatgatt cattctattt tagccttctt
    15241 ttttaatgaa tcaaaagtgt gttaggcttt ttattgaatg attattgcat gtgtgtcggt
    15301 ttttgttgct taatcataag caacaggacg caggagtata aaaaatgaaa accgcttaca
    15361 ttgccaaaca acgccaaatt agcttcgtga aatctcactt ttctcgtcaa ctggaagaac
    15421 gtctggggct gatcgaagtc caggcaccga ttcttagccg tgtgggggat ggcacgcagg
    15481 ataacttgtc gggctgtgaa aaagcggtgc aggtaaaagt gaaagctctg cctgatgccc
    15541 agttcgaagt ggttcattca ctggcgaagt ggaaacgtca gaccttaggg caacacgact
    15601 tcagcgcggg cgaagggctg tacacgcaca tgaaagccct tcgccccgat gaagaccgtc
    15661 tttctccgtt gcactcggtc tatgtagacc agtgggactg ggaacgcgta atgggcgacg
    15721 gtgagcgtca attctcgact ctgaaaagca cggtagaggc gatctgggcg ggaattaaag
    15781 caaccgaagc tgcggttagc gaagagtttg gcctggcacc gttcctgccg gatcagatcc
    15841 acttcgtaca cagccaggag ttactgtctc gttatctgga tctcgatgcc aaagggcgtg
    15901 agcgggcgat agcgaaagat cttggcgcgg tattccttgt cgggattggc ggcaagctga
    15961 gcgatggtca tcgccacgac gtgcgcgcac cggattatga tgactggagc accccgtcag
    16021 agctgggtca tgcgggtctg aacggcgata ttctggtgtg gaaccctgta ctggaagatg
    16081 cgtttgagct ttcttccatg gggatccgcg tggatgccga cacgctgaag catcagctgg
    16141 cgctgaccgg tgatgaagat cgtctgcagc tggaatggca tcaggcgctg ctgcgcggtg
    16201 aaatgccgca gaccatcggc ggcggtatcg gccagtctcg tttgactatg ctgctgctgc
    16261 aactgccgca tatcggccag gttcagtgtg gagtatggcc agctgctgtt cgcgagagcg
    16321 tcccttctct gctgtaataa tttatcgccg ccagcgtctg agcaggcggc ttcgcatccc
    16381 ggtatcaaag cgccagatat gatcgaaaat gcgcatgatg ccgggtttgc cgtgtgccga
    16441 catcgccacg gcatgaaagc gatgctgatg tacccgctgc agctctttca ctttactcgt
    16501 cacgtcgtca ggcaaccgct gagcgataaa atcagaaatc accaccgcat cggcatcaaa
    16561 ccattccctg ctttgcaagc gttccataat ggcgcgaaaa caactggcaa gatcggtgcc
    16621 gccacgaaac tgctggctta aaaaacggat tgcttgttcg atgccttgtg ggcctgaaag
    16681 ctcataacgg acgatctcgg tggaaaatag cataatatag cagcgccggt tttctgcgag
    16741 agcaatgcgc atcaaggcca ggcagaacgc tttcgcacac tgttcattaa agccgcccat
    16801 tgagccggaa gtatccacac agacaataaa cggcccgcgc ggctgttcat cgtaatcttt
    16861 atgtaccacc ggacgttcga tcactttttc acgccacgac tcaccgtgca ggcgataggt
    16921 gagcaactgt ttttccacca gccgacggta aaactcatac tccagttccg ttatccctag
    16981 tgtcgccagt tctggcggca ggagacgtaa aatatcatcg ctttgttgca gaccatcaac
    17041 ctgctcagga accgtcgccg gttcgcgcac catggtgcgg aaggtttcca tctgcgcatc
    17101 gttgcgcggt attgatttgg cttcccgaga acgccccagc tgctctgcca ggcgtttcag
    17161 ttccggctgt tcgttaagaa attcaccgta tttcacaatc aactgatagt cgccacgttt
    17221 aagctggccg gcgctcatat cccacagacg accagctgcg gtattgttat ctgcgagaat
    17281 cggttcaagt tgtccgctca gcgtcatgcg ttcctgaact tcacttaaca gttgttcgcg
    17341 ttcttcttct aatagctgtt gatttaacgt cgttgcttgc acgatcagac ttaaacgcca
    17401 gcgctggaga aaaagcgtgt gtaacgctga agttattgtg ctgttagcat caaccaactg
    17461 ccgggcttgt tctgcccatg gggaattcag acgatgcagt aagtccagga tctgtggtag
    17521 ctgcacaata aactgcggcg tggagaggag ctggctttgc tgatagcaca tcacctcttc
    17581 ggtgagttct ggcgggactc gggcatcttt cagccgactg cgcagcgcct cacgccagcg
    17641 gggaacatca tcagtgattg ctgccttcag tcgtgggaat ttttcaaaga agaccgccag
    17701 ctgcggtgag gccagcagtg cgatgatcat ctcttcgatc aatccctctt cgctgacggc
    17761 cagcatcaca ttaagcgtat ccagcgttag cattgttgtg cctggcgaat ctgtgcaccg
    17821 acatcctgta ggctggcttc aatgcgacct aaccagtcgc cagggataaa cagacatttt
    17881 tgctgttcgc tgaataaagc gtgttgctta cgccagtcgc tttcaagctc ttccagttgt
    17941 tgttttattt cacctggcag accttcagcc gatgaaccgg gaagtgccag cgtactgcct
    18001 tgtaaactta catcgcgtac aacaagatgt tgggtgctat caacttccag attcagtttc
    18061 tgggcaaagc cgataccgtt cagtttgccg cgaatttcac cacctttact cagccactgt
    18121 tccagcgcgc tacgctcaaa ggagatatga accacttcca tatcatgcag ttttaacggt
    18181 ttttgcagca gcagagtcag agtggaagca gtaacgttaa cagggagttg atactgctga
    18241 cgacggctaa aaatgctgcc cagacgaatt accgttaagg ctgttttatc gctttgttgc
    18301 tgctgaagtt gcaggtgacg ttgcacaatc gcgcctaggc gggtcaacat cccttgctgt
    18361 tgccaggcgt gaccggtcat caatacatca atttgttgtt gtatcaaatt caggctttgc
    18421 gcgtcatacc acaggcaatc tttcagcaaa atgagatcta ccggggcaac agcactgcga
    18481 ccgctaaaaa aggcgctggc ctgcaataat cggatcgctt ttttccagcg acgatccgag
    18541 acataaggcg catccggtaa tttatccagt tgctggcgca gcataaaaat cagctcaaat
    18601 acatgatcgg gcagcgtaat ttcaccaatc tctttctgcc agcgttcata ttcttcatct
    18661 gtgacctgca aggcatcagg aaccggattg tcgttttcat cctgttgact ggtcagcatg
    18721 gagcggaaat tcgctttatc ctgcacttta tctaaccaca gacgaatcag catgcggtca
    18781 tataacgctt ccagactgct gtctgcttcc ggcagctcgt tggaggccgc caccagcaga
    18841 cgcatcggga ttttttctac gtgtgcaccg ttgcggaact ggcgctcgtt aatggcggtg
    18901 agcaaggtat taagaattgc cgggcccgct ttccagatct catccagaaa gacaatttct
    18961 gcttccggca ggtaaccgct ggttaaacgt tcatagcgcc cttcatcttt tagcgcctga
    19021 atagaaaggg gaccaaaaac ttcttccggc gtggagaagc gggtcatcag atattcaagc
    19081 gcgcgggcat tctgaaaggc gaattttaag cgccgggcga tcaaactttt ggcaatacct
    19141 ggcgggccaa ggaggaacac actttcacca cttaatgccg ctaataaaca caagcggatg
    19201 gcgtggctac gttcataaag ccccttttcc aacgaactgc tcaggcggga aattctttcc
    19261 gctaataaat gagggtgagc cataatgaag tggcgtcctt tcgtcaaaag ttctgcgtaa
    19321 attgcgagta tagacgtttc ttgctggtgg ctaaaatagt ctcaaag
//
LOCUS       DADKRT010000074        19311 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.075, whole genome shotgun sequence.
ACCESSION   DADKRT010000074 DADKRT010000000
VERSION     DADKRT010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19311
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.075"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..731
                     /gene="rihB"
                     /locus_tag="JQ356_002156"
     CDS             <1..731
                     /gene="rihB"
                     /locus_tag="JQ356_002156"
                     /EC_number="3.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribosylpyrimidine nucleosidase"
                     /protein_id="HAY4622244.1"
                     /translation="MRKQIVADNIHGETGLDGPVFESLTRQAESTHAVKYIIDTLMAS
                     DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEA
                     ARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENY
                     GLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKV
                     GITIDTDWFWGLVEECVRGYIKTH"
     gene            831..2081
                     /locus_tag="JQ356_002157"
     CDS             831..2081
                     /locus_tag="JQ356_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HAY4622245.1"
                     /translation="MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGG
                     IMLWLPAGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL
                     PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDHLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
                     LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVA
                     YLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
     gene            complement(2137..3225)
                     /locus_tag="JQ356_002158"
     CDS             complement(2137..3225)
                     /locus_tag="JQ356_002158"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY4622246.1"
                     /translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK
                     GRIKGKGYILTEQEYCVVVGTINMDIRGIADIRYPQAASHPGTIHCSAGGVGRNIAHN
                     LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT
                     VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDT
                     VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNAAVNALHQQGVQQLFVY
                     LPDESVYCSEKDGEQFLLTAPAHTTVDSFGAGDGFMAGLVYSFLEGYSFRDSARFAVA
                     CAAISRASGSLNNPTLSADNALSLVPMV"
     gene            complement(3228..4085)
                     /gene="nfo"
                     /locus_tag="JQ356_002159"
     CDS             complement(3228..4085)
                     /gene="nfo"
                     /locus_tag="JQ356_002159"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HAY4622247.1"
                     /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
                     TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
                     LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
                     DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK
                     AQQTEKAVA"
     gene            complement(4159..5208)
                     /locus_tag="JQ356_002160"
     CDS             complement(4159..5208)
                     /locus_tag="JQ356_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HAY4622248.1"
                     /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
                     SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
                     SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
                     SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIIVAI
                     FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
                     VGGGAINYVIQSVIA"
     gene            5308..6189
                     /locus_tag="JQ356_002161"
     CDS             5308..6189
                     /locus_tag="JQ356_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4622249.1"
                     /translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ
                     LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY
                     ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE
                     DELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMEL
                     GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS
                     NALRRFLDYCDPANIPR"
     gene            6394..7863
                     /gene="lysP"
                     /locus_tag="JQ356_002162"
     CDS             6394..7863
                     /gene="lysP"
                     /locus_tag="JQ356_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HAY4622250.1"
                     /translation="MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS
                     QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
                     LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF
                     QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
     gene            8156..10136
                     /gene="cirA"
                     /locus_tag="JQ356_002163"
                     /pseudo
     CDS             8156..10136
                     /gene="cirA"
                     /locus_tag="JQ356_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416660.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
     gene            complement(10168..11004)
                     /gene="yeiG"
                     /locus_tag="JQ356_002164"
     CDS             complement(10168..11004)
                     /gene="yeiG"
                     /locus_tag="JQ356_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HAY4622251.1"
                     /translation="MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP
                     VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGF
                     YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLID
                     QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL
                     LK"
     gene            11262..11930
                     /gene="folE"
                     /locus_tag="JQ356_002165"
     CDS             11262..11930
                     /gene="folE"
                     /locus_tag="JQ356_002165"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HAY4622252.1"
                     /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
                     TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
                     RHHN"
     gene            11947..13103
                     /locus_tag="JQ356_002166"
                     /pseudo
     CDS             11947..13103
                     /locus_tag="JQ356_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416657.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
     gene            13245..14285
                     /gene="galS"
                     /locus_tag="JQ356_002167"
     CDS             13245..14285
                     /gene="galS"
                     /locus_tag="JQ356_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
                     /protein_id="HAY4622253.1"
                     /translation="MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELD
                     YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
                     KERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDN
                     LSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGT
                     PDMPGGEAAMVELLGRNLQLTAIFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP
                     IARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQN
                     AAAITNSTNQAM"
     gene            14565..15563
                     /gene="mglB"
                     /locus_tag="JQ356_002168"
     CDS             14565..15563
                     /gene="mglB"
                     /locus_tag="JQ356_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HAY4622254.1"
                     /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
                     KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
                     DGQIQSVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
                     VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
     gene            15624..17144
                     /gene="mglA"
                     /locus_tag="JQ356_002169"
     CDS             15624..17144
                     /gene="mglA"
                     /locus_tag="JQ356_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HAY4622255.1"
                     /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
                     MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ
                     RSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
                     AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
                     VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
                     PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANE
                     AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDKSRMKSDTQWVIDS
                     MRVKTPGHRTKIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA
                     ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
     gene            17160..18170
                     /gene="mglC"
                     /locus_tag="JQ356_002170"
     CDS             17160..18170
                     /gene="mglC"
                     /locus_tag="JQ356_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HAY4622256.1"
                     /translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
                     MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPCWQYIIKGAIIIFAVALDSLKYAR
                     KK"
     gene            complement(18413..19311)
                     /gene="preA"
                     /locus_tag="JQ356_002171"
                     /pseudo
     CDS             complement(18413..19311)
                     /gene="preA"
                     /locus_tag="JQ356_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
BASE COUNT         4601 a         4772 c         5121 g         4817 t
ORIGIN      
        1 ttatgcgtaa acaaatcgtt gccgataata ttcacggtga aaccggactg gatggtccgg
       61 tattcgagtc gctgacccgc caggcagaaa gtacccacgc ggtgaaatac atcattgata
      121 ccctgatggc aagcgatggc gatatcactc tggtgccggt tggtccgctt tcaaatatcg
      181 cggtggcaat gcgtatgcaa cccgcgatcc tgcccaaaat ccgtgaaatt gtgctaatgg
      241 gcggcgctta cggtacaggc aacttcacgc catctgccga gttcaacatc tttgctgatc
      301 cggaagcagc ccgcgtggtg ttcacctccg gcgttccatt agtgatgatg ggcctcgatc
      361 tcaccaacca gactgtttgc accccggacg tgattgcacg gatggaaagg gcaggcggcc
      421 ctgccggaga gctgttcagc gacatcatga acttcactct caaaacgcag ttcgaaaact
      481 acggcctggc tggcggcccg gtgcacgacg ccacctgcat cggttatctg attaaccctg
      541 atggcattaa aacccaggag atgtacgtcg aagtggacgt caacagtggc ccttgctatg
      601 ggcgtaccgt ctgcgacgag ctgggcgttc ttggcaagcc cgctaatacc aaagtcggca
      661 tcactattga taccgactgg ttctggggct tagtcgaaga gtgcgtgcgc ggctacatca
      721 aaacccatta agtgttgata acaagccggg tcagtatcgc aagatccaag cccggctatt
      781 tctgatgggc agaaagccgt cgcccaatat gacatgaaga gataataact atggatgtca
      841 tgagaagtgt tctgggaatg gtggtattgc tgacgattgc gtttttgctg tcagtaaaca
      901 agaagaagat cagcctgcgt accgttggcg cggcgttagt gttacaggtc gtgattggcg
      961 ggattatgct ttggttaccg gcagggcgtt gggtcgctga aaaagtcgct tttggcgtgc
     1021 ataaagtgat ggcgtacagc gacgcgggta gcgcatttat cttcggttcg ctggtcgggc
     1081 cgaaaatgga cacgctgttt gatggcgcag gatttatctt tggtttcagg gtattaccgg
     1141 caattatctt cgtcactgca ctggtgagta ttctctacta catcggtgtg atggggattt
     1201 taattcgcat tctcggcggt atattccaga aagcattaaa tatcagcaag attgagtcat
     1261 tcgtcgcggt caccaccatt ttcctcgggc aaaacgaaat tccggcgatc gtcaaaccct
     1321 ttatcgatca tctgaatcgc aatgaattat ttacagcgat ttgtagtggc atggcctcga
     1381 ttgctggttc gacaatgatt ggttacgccg ccctgggcgt acctgtggaa tatttgctgg
     1441 cggcatcgtt aatggcgatc ccaggcggga tcttgtttgc tcgcctgtta agcccggcta
     1501 cggaatcttc gcaggtttcc tttaataacc tctctttcac cgaaacaccg ccaaaaagca
     1561 ttattgaagc cgctgcgaca ggggcaatga ccgggctgaa aatcgccgcc ggtgtagcga
     1621 cagttgttat ggcatttgtc gccatcattg cgttaattaa tggtattatc ggcggcgttg
     1681 gcggctggtt tggttttgca catgcctcgc tggagtccat tttaggttac ctgttggccc
     1741 cattggcgtg ggtgatgggg gttgactgga gtgatgcaaa tcttgccggg agtttgattg
     1801 ggcagaagct ggcgatcaat gaatttgtcg cttatctcaa tttctcgcca tatctgcaaa
     1861 cgggtggcac tctggatgct aaaaccgtgg cgattatttc tttcgcgttg tgcggtttcg
     1921 ctaactttgg ttctatcggg gtggtggtgg gggcgttttc tgcggttgcg ccacaccgtg
     1981 cgccggaaat cgcccaactt ggtttacgcg cgctggcggc ggcgacactt tctaacctga
     2041 tgagtgctac tattgcagga ttctttattg gtttagcgta gtgcgcaatt tatgagccgg
     2101 ataagatgcg gtcaagcgtc gaatccggca acattgttac accattggca ctaatgaaag
     2161 cgcgttatcg gcagacaggg tagggttgtt taagctgccg ctggcgcgcg aaattgccgc
     2221 gcaggctacc gcaaaacggg cgctgtcgcg gaaactgtat ccttcaagaa agctatatac
     2281 caggcccgcc ataaaaccat cgccagcacc aaaactgtct actgtcgtat gcgctggcgc
     2341 ggtcagcaaa aattgttctc catccttttc gctgcaataa actgactcat cgggcaaata
     2401 aacaaacagt tgctgaacac cttgctgatg caatgcattc actgcggcat tacggtcagc
     2461 atcgctggtg atcgcctgtc cccataaaat ttccagctcc ggtaaagtgg gtttcagggt
     2521 gtgaatatgc gccagccagt gtttgatttt gcccgctttg aattctgaaa cggtatcgac
     2581 aaacaccggg atttcatcag cgagggtaaa gacccattcc agcgcctcgg ctgtcaggtt
     2641 gcaatcagcc agtaccacgc ccgcatgacg aagtaaatcg cgcgacccgt tcagtagttg
     2701 cggtgtcaac tgttccagca gatgggtatc gttaatcgcc agcacggttt gatcgtctcg
     2761 attggcaatt gccagatacg tcgatgtgct ttgaccatgc aaacgaacgc agccggagac
     2821 attcacgccg gcacggcgcg tttcttccag gagcatttcg ccataaaagt catcgccaat
     2881 cactgaaagc aaatggacgt cacggcctaa cagcgccaga ttgtgggcga tgttgcgtcc
     2941 cacgccgccc gccgagcaat gaattgtacc gggatgagaa gccgcttgcg ggtaacggat
     3001 atccgcgatc ccgcgaatat ccatattgat tgtccccacc actacgcagt attcctgctc
     3061 ggtgagaatg taacctttgc ctttaatccg ccctttgcgc attaaatcca taatatgcgc
     3121 cgcaacgcgc gaacgactga tttgcagcat gtccgcaatt tcgttctgct gaatcagcgg
     3181 gttacgccgt aaaattgcaa ggatctcctt ttcccggtta ttcatcttca ggctaccgct
     3241 ttttcagttt gttgcgcttt cagccaggcg atctcttctg cccagatatc cgggttgatg
     3301 gtttcaagga tcagcggaat gccgtcgaaa cggtcgtcct gcatgatcca gcggaacgca
     3361 tcatgaccga tattgccttc accgaggcta tgatggcggt caacgcggct gccaaaggtg
     3421 cttttcgcat cgttaaggtg catcccgcgc agatacttaa agccaacaat acgggcaaaa
     3481 tccgcgaacg ttttctcgca ttcggctgga gtacgcaaat catacccggc agcgaaagca
     3541 tggcaggtat caatgcagac gccgacacgg gatttatctt ccacgccgtc gataatcgcc
     3601 gcgagatgtt cgaatttaaa ccctaagtta ctgccctgac cggcggtgtt ttcaatcacc
     3661 gctgttacac cttgagtttt atccagcgca atgttgatgg attcggcaat acgcgcaagg
     3721 caatcctctt ctgaaatctg catcagatgg ctgccagggt ggaagttgag caaagaaagc
     3781 cccagttgtt cgcaacgctg catttcatct ataaaggcat cgcgcgattt ttccagagct
     3841 tcagtgaccg gatgtccgag gttaatcaga tagctgtcgt ggggaagaat ttgcgccgat
     3901 gtgtagtgat atttttcaca ggctgctttg aattcatcga tggtttgcgt cgtgagcggt
     3961 gcggcacgcc actgacgttg gtttttggtg aacaaggcaa acgcggttgc gtcgatttcg
     4021 gcggcgcgaa ttgcggcatt tgccagaccg ccagcagcac taacgtgcgc tccaatgtat
     4081 ttcatgcgag gactcctgtt aaacccgctg gaggaaaacg gtaatgatag cgggttaaca
     4141 ggagcaagat gtagtggttt atgcgatgac gctttgaatc acatagttaa tcgcaccacc
     4201 accaacaatc agccaggcaa acagtaccag tgccatcagc agaggtttcg ccccggcttt
     4261 tttcagcgcg ctgacgtgag tggtcagacc cagcgccgcc atcgccattg ccagcaggaa
     4321 ggtatccagc gttaccagca tgttcaccac gctctgcggt aacaggtgga acgagttaaa
     4381 gatggcaacg atgatgaaca agatggcaaa ccacggaata gtgattttgc ttttctcgcc
     4441 gctgttcgcc ccagacagct gtttaacacg cgccgccagc aggatgagga acggagccag
     4501 catcatcacg cgcagcattt tggaaataac tgctgcgttt tccgcatccg ggctgatggc
     4561 atgacctgcc gccaccacct gcgccacttc gtgcacagta gaaccaatgt agataccgaa
     4621 agtttccgga ctaaaccatt gagacatcag cggatatatc gccgggtaga ggaaaatcgc
     4681 gacggtcccg aagataacaa cggttgcaac agccacggtt actttactgg cttccgcttt
     4741 cactaccggc tcagtcgcca gtaccgcggc agcaccacag atactgctac cggcaccgat
     4801 caaccagctg gtgtgcttat ccagaccaaa cactttctgc cccaggaagc aagccagcag
     4861 gaaggtactg gacagcgtca acacgtcaat gatgatccca ctgataccga catcggcaat
     4921 ttgcgagaac gtcagacgga agccataaag aatgataccc agacgtaata aatattgctt
     4981 ggcaaacagc acaccaccgt cacagctttt ccagatgtgc ggatagatgg tgttgcctaa
     5041 aaccatcccc aacaagattg cgagggtgag ggcactaaac ccggcacccg caaccgcggg
     5101 aatggaacca ccccacaggg cgaccccggt gataactgca ctcagggcta accccggaat
     5161 aaaatgccac agtgtacgat gttgtttctg taaggtgata ttcgtcataa ccctctcctt
     5221 ataaccgggc ataaggttac gactaactgg tttaaaaata aaattgatta tatatttata
     5281 attaatcttt ataagtggta agcgactatg cacatcaccc tccggcagtt ggaagttttt
     5341 gcagaagtat tgaaaagtgg atcaaccacc caggcgtcgg tgatgctggc gttgtcgcaa
     5401 tcagcagtga gcgcagcctt gaccgacctg gaagggcagc ttggcgtgca actgtttgat
     5461 cgcgtgggga aaagactggt tgttaatgaa cacgggcggc tgctctatcc gcgtgcgttg
     5521 gcattgcttg aacaggcggt tgaaatcgaa caactgtttc gcgaagacaa cggcgcgatt
     5581 cgtatctatg ccagtagtac catcggtaac tacattctgc ctgcagttat cgcccgttat
     5641 cgccatgatt atccgcagtt gccgattgaa cttagcgttg ggaacagcca ggacgtgatg
     5701 caagcggtgc tggatttccg cgttgatatt ggctttattg aaggaccgtg ccacagcact
     5761 gaaatcattt ctgaaccgtg gctggaagac gagctggtgg ttttcgccgc gccgacttcg
     5821 ccgttggctc gtggtccggt caccttagaa cagctggccg ctgcgccgtg gatcctgcgt
     5881 gaacgcggtt ccggcacgcg ggagattgtc gattatctat tgctgtcaca tttaccgaag
     5941 tttgagatgg cgatggaatt aggtaactcc gaggcaatca aacatgcggt gcgtcatggg
     6001 ttgggaatta gttgcctgtc gcgacgggtg attgaagatc aattgcaggc aggcacatta
     6061 agtgaagttg cggtccctct gccgcgcctg atgcgtacgt tgtggcgtat acatcatcgg
     6121 caaaaacacc tttccaacgc gctacggcgc tttctggact attgcgatcc cgcgaatata
     6181 ccgcgttaag ttgctgtaca agaacatgct ggtgctgtgt cgatttcgtg acgcagcgcc
     6241 ctcagcatgc attcgccaga aaagagattg gctgctttac ttataatccc agggcgatca
     6301 tgaaggtgtc ttataaccgt gtatttctgc cggaaggatt gccaatcgtc tgctacaatc
     6361 gcgcctcatt tttaagatgg atagcatttt tgtatggttt ccgaaactaa aaccacagaa
     6421 gcgccgggct tacgccgtga attaaaggcg cgtcacctga cgatgattgc cattggcggt
     6481 tccatcggta caggtctttt tgttgcctct ggcgcaacga tttctcaggc aggtccgggc
     6541 ggggcattgc tctcgtatat gctgattggc ctgatggttt acttcctgat gaccagtctc
     6601 ggtgaactgg ctgcatatat gccggtttcc ggttcgtttg ccacttacgg tcagaactat
     6661 gttgaagaag gctttggctt cgcgctgggc tggaactact ggtacaactg ggcggtgact
     6721 atcgccgttg acctggttgc agctcagctg gtcatgagct ggtggttccc ggatacaccg
     6781 ggctggatct ggagtgcgtt gttcctcggc gttatcttcc tgctgaacta catctcagtt
     6841 cgtggctttg gtgaagcgga atactggttc tcactgatca aagtcacgac agttattgtc
     6901 tttatcatcg ttggcgtgct gatgattatc ggtatcttca aaggcgcgca gcctgcgggc
     6961 tggagcaact ggacaatcgg cgaagcgccg tttgctggtg gttttgcggc gatgatcggc
     7021 gtagctatga ttgtcggctt ctctttccag ggaaccgagc tgatcggtat tgctgcaggc
     7081 gagtccgaag atccggcgaa aaacattcca cgcgcggtac gtcaggtgtt ctggcgaatc
     7141 ctgttgttct atgtgttcgc gatcctgatt atcagcctga ttattccgta caccgatccg
     7201 agcctgctgc gtaacgatgt taaagacatc agcgttagtc cgttcaccct ggtgttccag
     7261 cacgcgggtc tgctctctgc ggcggcggtg atgaacgcag ttattctgac ggcggtgctg
     7321 tcagccggta actccggtat gtatgcgtct actcgtatgc tgtacaccct ggcgtgtgac
     7381 ggtaaagcgc cgcgcatttt cgctaaactg tcgcgtggtg gcgtgccgcg taatgcgctg
     7441 tatgcgacga cggtgattgc cggtctgtgc ttcctgacct ccatgtttgg caaccagacg
     7501 gtatacctgt ggctgctgaa cacctccggg atgacgggtt ttatcgcctg gctggggatt
     7561 gccattagcc actatcgctt ccgtcgcggt tacgtattgc agggacacga cattaacgat
     7621 ctgccgtacc gttcaggttt cttcccactg gggccgatct tcgcattcat tctgtgtctg
     7681 attatcactt tgggccagaa ctacgaagcg ttcctgaaag ataccattga ctggggcggc
     7741 gtagcggcaa cgtatattgg tatcccgctg ttcctgatta tttggttcgg ctacaagctg
     7801 attaaaggaa ctcacttcgt acgctacagc gaaatgaagt tcccgcagaa cgataagaaa
     7861 taagtttcct cccttccttg ctaagccctc tcaaccgaga gggctttttc aattccattt
     7921 ccctgacaaa tcatgcggat ataaaattta acatttggat tgataattgc tatcgtttgc
     7981 attatcgtta cgccgcaatc aaaaaaggct gacaaatcag aggctgttcc ggctttctgg
     8041 gatgatcacc tgcatacaaa taagtccacc gcgatgctgc cgtacgcaag gggacgtgaa
     8101 gaaggtgtga gcgataaccc attttatttt cgtagttacc tcattgagat atggaatgtt
     8161 taggttgaac cctttcgtac gggtcaggct gtgtttgtcc gctatttctt gtgcatggcc
     8221 tgtgttagcg gtcgatgatg atggcgaaac gatggttgtc actgcatctt ccgttgaaca
     8281 aaacctcaaa gatgcacccg ccagtatcag cgtcattacc caggaagacc tgcagcgaaa
     8341 accggtacag aatctgaagg atgtcctcaa agaagtgcct ggcgtacaac tgacgaacga
     8401 aggggataac cgtaagggcg ttagtattcg tggtctggac agcagctaca ccctgattct
     8461 cgtcgacggt aaacgcgtta actcccgcaa tgccgtcttc cgccacaatg atttcgatct
     8521 gaactggatc ccggtcgatt ccatcgaacg tattgaagtg gttcgtggcc cgatgtcgtc
     8581 gctatacggc tccgatgcgc tcggcggtgt agtgaatatc atcaccaaaa aaatcggtca
     8641 gaaatggtcg ggtaccgtta ccgtcgatac caccattcag gaacatcgcg atcgcggtga
     8701 tacctataac ggtcagttct ttaccagtgg accattaatt gatggtgtgc tgggaatgaa
     8761 agcttacggc agcctggcaa aacgtgaaaa ggatgacccg caaaactcaa cgaccaccga
     8821 taccggagaa atgccgcgta ttgaaggatt ctccagccgc gacggcaatg tcgaatttgc
     8881 ctggacaccg aatcaaaatc acgattttac tgccggatac ggtttcgacc gtcaggaact
     8941 cgctggacaa aaaccgcctg gaacgccaga actactccgt cagccataat gggcgttggg
     9001 attacggcac cagcgaactg aaatactacg gtgagaaagt cgagaacaaa aaccctggca
     9061 acagcagccc gataacttcc gaaagcaata cggtcgacgg caaatacacg ttgccgctga
     9121 cggcgattaa tcagtttctc acggttggcg gtgaatggcg tcacgacaaa cttagcgatg
     9181 cggtgaacct gaccggggga accagctcca aaacgtctgc cagccagtac gcgctgtttg
     9241 tggaagatga atggcggatc ttcgagccgc tggcgctgac gaccggcgtg cgtatggacg
     9301 atcacgaaac ctacggtgaa cactggagtc cgcgtgccta cctggtttat aacgccaccg
     9361 acaccgtaac ggtgaaaggg ggctgggcga cggcatttaa agcaccttct ctgttgcaac
     9421 ttagccctga ctggacgagc aattcctgcc gtggcgcatg taagattgtg ggtagcccgg
     9481 atctgaaacc agaaaccagc gaaagttggg agctggggct ttactacatg ggtgaagaag
     9541 gctggctgga agggggggaa tccagcgtta ccgttttccg taacgatgtg aaagatcgta
     9601 tcagcatcag ccgtacgtct gacgtcaacg ctgcaccggg ctaccaaaac tttgttggtt
     9661 ttgagacggg cgctaacgga cggcgtatac cggtatttag ctactacaac gttaacaaag
     9721 ctcgtattca gggtgtggaa accgaactga aaattccgtt caacgatgaa tggaaactgt
     9781 cgatcaacta cacctacaac gatggtcgtg atgtcagcaa cggcgaaaac aaaccgctat
     9841 ccgatctgcc gttccatact gctaacggta cgctggactg gaaaccgctg gcgctggaag
     9901 actggtcatt ctatgtttct ggtcactata ccgggcagaa acgcgccgac agcgcgacgg
     9961 ctaaaacacc gggcggttat accatctgga ataccggcgc ggcctggcag gtgactaaag
    10021 acgtcaaact gcgcgcaggc gtgctgaacc ttggcgacaa ggatctcagt cgtgacgact
    10081 acagctataa cgaagacgga cgtcgttact ttatggcagt ggattatcgc ttctgatgag
    10141 aagatgcccg gcgaaccggg cggactttca cttcagtaaa tactgcgcat ggaagcgcag
    10201 gtgatcctct ataaaagagg cgatgaagta gtaactgtga tcatatcccg gctgaatacg
    10261 cagcgtcatc ggccacgctt tctggcgcgc ggcttctgcc agtaccgcag gttgcaactg
    10321 gtcggcaaga aactgatcat tatcgccctg atcgataagc gtcgggatcg catcctgcgc
    10381 gttactggca tacatcagcg cgcaactgtc ccattccagc catgcatttt tgtcctcacc
    10441 taaatagctg ctaaacgctt tgattcccca cgggacgctg cacggattca caattggcgc
    10501 aaaggccgaa acgctggtgt atttacccgg atttttcagc gccataatca gcgcaccgtg
    10561 accacccatt gagtgaccgc taatggcgca gcggtcgctg acattaaatt gcgactgaac
    10621 cagcgccggt aattcatcgc gcagataatc atacatccgg taatgcgtcg cccacggcgg
    10681 ttgcgtggca ttaagataaa agcctgcgcc ctggcctaaa tcgtagccat cgtcgttggc
    10741 aaccttttcg ccgcgcgggc tggtgtctgg catcaccagt acaatcccca gttctgccgc
    10801 cacgcgctgg gcacccgcct tggtggtgaa gttctcgtca ttgcaggtta atccggaaag
    10861 ccagtacagc actggtggcg gggtgtgatc acgagggggt gggagaaaga tactgaacgt
    10921 catcgggcag tttaaggtac tggagtcgtg tcgccagcgt tgctgccagc cttcaaaaca
    10981 gcggtgctct tcgagcattt ccatgcgtgg ctccttgttg tgttgtttgc aatttcttca
    11041 tcataccgtt tattcaatgt gctgtgagta actttcactt ccgtatttgc ataacgatgt
    11101 tttaacatct gctgatgaaa ggcagcggca attacaataa ttatcgctgt gaatactgga
    11161 ttatgtgcgc cgcctcacgc acaataatca ggctgtaaat cagcttaata actttgcccc
    11221 cacgcagggc ggaggcgtca cacctgcagg agaaatcata aatgccatca ctcagtaaag
    11281 aagcggccct ggttcatgaa gcgttagttg cgcgaggact ggaaacaccg ctgcgcccgc
    11341 ccgtgcatga aatggataac gaaacgcgca aaagccttat tgctggtcat atgaccgaaa
    11401 tcatgcagct gctgaatctc gacctggctg atgacagttt gatggaaacg ccgcatcgca
    11461 tcgctaaaat gtatgtcgat gaaattttct ccggtctgga ttacgccaac ttcccgaaaa
    11521 tcaccctcat tgaaaacaaa atgaaggtcg atgaaatggt caccgtgcgc gatatcactc
    11581 tgaccagtac ctgtgaacac cattttgtta ccatcgatgg caaagcgacg gtggcttata
    11641 tcccgaaaga ttcggtgatc ggtctgtcaa aaattaaccg tatcgtgcag ttctttgccc
    11701 agcgtccgca ggtgcaggaa cgtctgacgc agcaaattct tattgcgcta caaacgctgc
    11761 tgggcaccaa taacgtggct gtctccattg atgcggtgca ttactgcgtg aaagcgcgtg
    11821 gcatccgcga tgcaaccagt gccacaacaa cgacctctct tggtggattg ttcaaatcca
    11881 gtcagaatac gcgccacgag tttctgcgcg ctgtgcgtca tcacaactga ttaaaaggca
    11941 ggaaccatgg agcgcaacgt aacgctcgat tttgttcgcg gcgtcgccat tctggggatc
    12001 ctgctattaa acatcagcgc ctttgggcta ccaaaggcgg cttatctcaa tcccgcctgg
    12061 tacggcgcta ttacgccgca ggatgcatgg acctgggcat ttctcgatct catcggccag
    12121 gtgaaattcc tcacgctttt tgcgctgctg tttggtgcgg gcctgcaaat gttgctgccc
    12181 cgtggcagac gctggatcca gtcgcggtta acgctgttag tcttgctggg ttttattcac
    12241 ggtttattgt tctgggacgg cgatattctg ctggcttacg ggctggtggg cttaatctgc
    12301 tggcggctgg tgcgcgatgc gccatcggta aaaagcctgt ttaatacagg cgtcatgctt
    12361 tatctggtgg ggcttggcgt tttgctgtta ttggggctga tttccgacag ccagaccagc
    12421 cgcgcctgga cgccggatgc atcggctatt ttgtatgaaa aatactggaa gcttcacggc
    12481 ggcgttgaag cgatcagtaa tcgtgccgat ggtgttggca acagtttact ggcactgggc
    12541 gcacagtatg gctggcaact ggcagggatg atgctcattg gtgcgggctg atgcgcagcg
    12601 gctggctgaa agggcagttc agcttacgtc actatcgtcg tactggtttt gtgctggtgg
    12661 cgattggggt gaccattaac cttcctgcca tcgccctgca atggcagctg gactgggcgt
    12721 atcgctggtg tgccttctta cttcaaatgc cgcgggaact gagtgcgccg tttcaggcga
    12781 ttggctatgc gtcgctgttt tatggcttct ggccgcaatt gagccgcttt aagctggtgc
    12841 ttgcgatcgc ctgcgtcgga cggatggcgc tgaccaacta tctattgcaa acgctgattt
    12901 gtaccatgct tttttaccac ctcggtttgt ttatgcattt tgaccgcctg gagctgctgg
    12961 cgtttgttat tccggtatgg ctggcgaata tcctcttctc tgttatctgg ctgcgttact
    13021 tccgccaggg gccggtggaa tggctctggc gtcagttaac tttgcgtgct gccggaacgg
    13081 caatatctaa aacatcaaga taacgatctg gatcacattc gttaacaaaa cggctgtaac
    13141 cgtttccatt gctgtgactc gattcacgaa gtcctgtatt cagtgctgac aaaatagccg
    13201 ccagcaagca gtcatttact gcaatctcat aacaggtagt gaatatgatc accattcgtg
    13261 atgtagcgcg tcaggctggc gtctctgtgg caacggtttc ccgggtgctc aataacagca
    13321 cgctggtcag tgccgacacg cgtgaagcag taatgaaagc cgtgagtgag ctggattatc
    13381 ggccaaacgc caatgcccag gcgctggcaa ctcaggttag cgacaccatt ggcgtggtgg
    13441 tgatggacgt ttctgatgcg tttttcggcg cgctggtaaa agcggtggat ctagtcgctc
    13501 agcagcatca gaaatacgtg ctaatcggca atagctatca tgaagcggaa aaagagcgtc
    13561 acgccattga ggtgttaatt cgccagcgtt gtaatgcgtt gattgttcac tcaaaagcat
    13621 tgagtgacga tgaactggcg caatttatgg ataacattcc cggtatggtg ttaatcaacc
    13681 gcgttgtgcc ggggtacgcc catcgttgcg tttgcctgga taatctcagc ggtgcccgaa
    13741 tggcgacgcg catgttgctg aataacggtc atcaacgtat tggttatctt tcttccagtc
    13801 acggcattga agatgacgcc atgcgtaaag caggctggat gagtgcgttg aaagagcagg
    13861 atattattcc gccggaaagc tggattggca ctggtacgcc ggacatgccg ggcggtgagg
    13921 cggcgatggt tgaactgctg gggcgcaatc tacaacttac cgctatattt gcttataacg
    13981 acaatatggc cgctggcgca ctgacagcat taaaagataa tggcattgcg attccgttac
    14041 atctctcaat catcggtttc gatgatattc ccatcgcccg ttacaccgac ccgcaattaa
    14101 cgaccgtgcg ttatcccatt gcttcaatgg ctaaattagc caccgaactg gccttgcagg
    14161 gggcagcagg caatattgat cctcgtgcca gccactgttt tatgccgacg ttagtgcgtc
    14221 gccattctgt cgcaacgcgc cagaatgcgg cggcgatcac taactcaaca aatcaggcga
    14281 tgtaaccgct ttcaatctgt gagtgatttc acagaatctt aacaatgtga tagctatgat
    14341 tgcaccgttt taacgttgta acccgtatgt aacagtgaat aatcactttc accgaggtaa
    14401 tagcgtcata acaacaatta aagccgtttt ctggagcgtt accgggcatg gaagaacgaa
    14461 ttttaaaaag tgagcttcgg cgttcagtaa cacttcatta actctactgc cctgccgagc
    14521 atttatctca agcactaccc tgcataagaa aaaccggaga taccatgaat aagaaggtgt
    14581 taaccctgtc tgctgtgatg gccagcatgt tattcggtgc cgctgcacac gctgctgata
    14641 ctcgcattgg tgtaacaatc tataagtacg acgataactt tatgtctgta gtgcgcaagg
    14701 ctattgagca agatgcgaaa gccgcgccag atgttcagct gctgatgaat gattctcaga
    14761 atgaccagtc caagcagaac gatcagatcg acgtattgct ggcgaaaggg gtgaaggcac
    14821 tggcaatcaa cctggttgac ccggcagctg cgggtacggt gattgagaaa gcgcgtgggc
    14881 aaaacgtgcc ggtggttttc ttcaacaaag aaccgtctcg taaggcgctg gatagctacg
    14941 acaaagccta ctacgttggc actgactcca aagagtccgg cattattcag ggcgatttga
    15001 ttgctaaaca ctgggcggcg aatcagggtt gggatctgaa caaagacggt cagattcagt
    15061 ccgtactgct gaaaggtgaa ccgggccatc cggatgcaga agcacgtacc acttacgtga
    15121 ttaaagaatt gaacgataaa ggcatcaaaa ctgaacagtt acagttagat accgcaatgt
    15181 gggacaccgc tcaggcgaaa gataagatgg acgcctggct gtctggcccg aacgccaaca
    15241 aaatcgaagt ggttatcgcc aacaacgatg cgatggcaat gggcgcggta gaagcactga
    15301 aagcacacaa caagtccagc attccggtgt ttggcgtcga tgcgctgcca gaagcgctgg
    15361 cgctggtgaa atccggtgca ctggcgggca cagtactgaa cgatgctaac aaccaggcga
    15421 aagcgacctt tgatctggcg aaaaacctgg ccgatggcaa aggtgcggct gatggcacca
    15481 actggaaaat cgacaacaaa gtggtccgcg taccttatgt tggcgtagat aaagacaacc
    15541 tggctgaatt cagcaagaaa taagactgat tgggcgcagt cgtttactgc gcccttattg
    15601 tatggccaac aaggtaaaat tatatggtca gctcaacgac tccgtcttcc ggggaatact
    15661 tgttggaaat gagcggtatc aacaagtcct ttcctggtgt taaggcactt gataacgtta
    15721 atttaaaagt ccggccacat tctatccatg cattaatggg ggaaaacggt gcaggaaaat
    15781 cgacattatt aaaatgcctg tttggtattt atcaaaaaga ctccggcacc attttattcc
    15841 agggtaaaga gatcgatttc cattccgcca aagaggcact ggaaaatggt atttcgatgg
    15901 tacaccagga gttaaacctg gtattacaac gttcggtgat ggataacatg tggctggggc
    15961 gatatcccac caaaggcatg tttgtcgatc aggacaaaat gtaccgcgaa accaaagcga
    16021 tttttgatga actggatatt gatatcgatc cgcgtgcgcg cgtcggcaca ttatccgttt
    16081 cgcaaatgca gatgatcgaa atcgccaaag cgttttccta taacgcgaaa attgtgatta
    16141 tggatgaacc gacttcttcg ttaaccgaaa aagaggtcaa tcatctgttc actattattc
    16201 gtaaattaaa agagcgcggc tgcggtattg tttatatctc gcataaaatg gaagaaatct
    16261 tccagttatg tgatgaagtt accgtattgc gcgacggtca gtggatcgcc accgaaccgc
    16321 tggcaggact gacgatggac aagatcatcg ccatgatggt tgggcgttct cttaatcagc
    16381 gttttcctga caaagaaaac aagccgggcg aagtcatcct cgaggtgcgt aacctaacgt
    16441 cactgcgcca gccgtcgatt cgcgatgtct cgtttgatct gcataaaggg gagatcctcg
    16501 gtattgccgg gctggtgggg gcgaaacgta ccgatattgt tgagacgtta tttggtattc
    16561 gcgagaaatc ggctggcacc attacgttgc acggcaaaca gatcaataac cataatgcca
    16621 acgaagccat aaaccacgga tttgcactgg taactgagga gcgccgctca acgggaattt
    16681 atgcctatct ggatattggt tttaactcgt taatttccaa tattcgcaac tacaaaaata
    16741 aagttggttt actggataaa tcgcggatga aaagcgatac ccagtgggtg attgattcga
    16801 tgcgggtaaa aacaccgggg catcggacga aaattggttc gctctcaggt ggtaatcagc
    16861 aaaaggtgat tattgggcgc tggctactaa cgcaaccaga aatattaatg ctcgatgaac
    16921 cgacgcgcgg tattgatgtc ggggcgaagt ttgagatcta tcagttaatt gccgaactgg
    16981 cgaagaaagg caaagggatt attattatct cctctgaaat gcctgagttg ttagggataa
    17041 cagaccgtat tctggtcatg agcaatggtc tcgtttccgg aattgtcgac acaaaaacaa
    17101 caacgcaaaa cgaaattctg cgtcttgcgt ctttgcacct ttaagattag gggcttccca
    17161 tgagtgcgtt aaataagaaa agttttctta cttacctgaa agagggcggt atttacgtcg
    17221 ttcttttagt tttgctggcg attattattt tccaggaccc aacattttta agtctgttga
    17281 acttaagtaa tattctcacc cagtcatcgg tgcgtattat tatcgcgctc ggtgtggcag
    17341 ggttaattgt cacccagggg accgaccttt ctgcggggcg tcaagtaggg ctggcagcag
    17401 tggtggcagc gacattattg cagtccatgg ataacgccaa taaagtgttc ccggaaatgg
    17461 cgacgatgcc gattgcgctg gttattctga ttgtctgtgc cattggtgcg gtgatcggtt
    17521 tgatcaacgg tctgattatc gcttatctca acgttacgcc gttcattacc acgctcggca
    17581 cgatgatcat cgtctatggc atcaactcgc tctattacga ctttgtcggg gcgtcgccaa
    17641 tttctggttt tgacagtggc ttctctacct ttgctcaggg ctttgtcgcg ctggggagtt
    17701 tccgtctctc ttacatcacc ttctacgcgt tgattgcggt ggcgttcgtc tgggtgttgt
    17761 ggaacaaaac ccgcttcggt aagaacattt ttgccattgg cggtaacccg gaagcggcaa
    17821 aagtatctgg tgtcaacgtc ggcctgaacc tgctgatgat ctacgcgttg tctggcgtgt
    17881 tctatgcctt tggcgggatg ttagaagccg gacgtatcgg ctctgccacc aacaacctcg
    17941 gctttatgta tgagctggat gctatcgcgg cgtgcgtggt aggcggtgta tcgttcagcg
    18001 gcggtgtggg gacggtgatt ggcgtggtga ccggggtaat tatttttacc gtcatcaact
    18061 atggcctgac gtatatcggc gtaaacccat gctggcagta catcatcaaa ggggcgatta
    18121 ttatcttcgc cgtagcgctg gattcactga aatacgcgcg taagaaatga tgtgaatgtg
    18181 gtccgcattc ggtcataaac gcacataaca tcatgatctg tgtggttttg taggccggat
    18241 aaggcgttca cgccgcatcc ggcaacagga gccaaatgcc ggatgcaacg ctggcgcgtt
    18301 ttatccggcc tacaataagc tcaacatact gatttgtatg gttttgtagg ccggataagg
    18361 cgttcaagcc gcatccggcg acaggaacca aatgccggat gtgacgcggg ttctacaacg
    18421 ttaccgggtg ttctttctcg cctttcttaa acttcacttc cccgagctca atacaaccca
    18481 ccgggcagac gtgaccacaa agcagacaac ccacacattt ctcggtatta caatgcggtg
    18541 tgcgggtttt ctcgctccat tccatcgcct ggtgaccgcc gtcgtaacag gaaatataac
    18601 agcgtccaca gccaacacat ttgtcaagat tgatacgggg atagacaata taactgcggt
    18661 ctaaatcttc cgccgggaca atattgttat tcgccagacc taccatctcc tgcaacgaat
    18721 caaatccctg atcggcgaga taatgcgata acccgctcgc catatcttct acgatgcgat
    18781 tgccgtactg cataatgccg gtggtgacct gtaacgttgc tgcgccgagc aataaaaact
    18841 ccgccgcatc ctcccaggtt tcaatgccgc cgataccgct gattgggaaa tcgcgcagtt
    18901 ctggatgggt gcgcatttgc tgaatgaagc gcagggcgat cggttttacc gctttaccgg
    18961 aatatccgga aatactcgat ttaccgttaa cgatcggcat accgattttc tgattaagat
    19021 cgatattggt gatggattta acggtgttaa ttgccgcaat gccatctgcg ccgccgcgct
    19081 tcgccgccag cgccacttcg cacatatcac cgatattcgg cgtcatcttc gccagcattg
    19141 gcagcgtgga accgcgtttc accgcccgac aatatttttc taccagcacc ggactttgcc
    19201 cgacatcgct acccatcgca tgagaagtca tttgcggaca ggagaagtta cactcgatca
    19261 tatccgcgcc agctcctccc attgctgctc attttccccc atgatcgaag c
//
LOCUS       DADKRT010000075        19149 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.076, whole genome shotgun sequence.
ACCESSION   DADKRT010000075 DADKRT010000000
VERSION     DADKRT010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19149
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.076"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..909)
                     /locus_tag="JQ356_002172"
     CDS             complement(<1..909)
                     /locus_tag="JQ356_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY4622257.1"
                     /translation="MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDS
                     LKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAV
                     MQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
                     TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYIL
                     LTGDEARFKAFISELTRRMPHHRERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLL
                     RLLLQNGADPEWIQRYTGLSAEQMQAL"
     gene            1376..2608
                     /gene="mdtM"
                     /locus_tag="JQ356_002173"
     CDS             1376..2608
                     /gene="mdtM"
                     /locus_tag="JQ356_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtM"
                     /protein_id="HAY4622258.1"
                     /translation="MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFN
                     ADVSLAPAAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMT
                     QFLIARAIQGTSICFIATVGYVTVQEAFGQTQGIKLMAIITSIVLIAPIIGPLSGAAL
                     MHFVHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVFRDFRNVFCNRLFL
                     FGAATISLSYIPMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVK
                     DPTEPRFIWRAVPIQLVGLALLIIGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFT
                     LFSNNLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLA
                     GLLNRVRQHQAAELAEER"
     gene            2649..3929
                     /locus_tag="JQ356_002174"
     CDS             2649..3929
                     /locus_tag="JQ356_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HAY4622259.1"
                     /translation="MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIA
                     EAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSL
                     VALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAI
                     DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEH
                     PLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDP
                     EMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKADINSEDSRVKERIARAGQWFGE
                     TLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKD
                     LQFIRVNGTLVGGCIGLILYLLSQLPALFPLSNF"
     gene            4045..5197
                     /locus_tag="JQ356_002175"
                     /pseudo
     CDS             4045..5197
                     /locus_tag="JQ356_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418755.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase subunit D"
     gene            5207..5975
                     /locus_tag="JQ356_002176"
                     /pseudo
     CDS             5207..5975
                     /locus_tag="JQ356_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313324.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5972..6229
                     /locus_tag="JQ356_002177"
     CDS             5972..6229
                     /locus_tag="JQ356_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3343 domain-containing protein"
                     /protein_id="HAY4622260.1"
                     /translation="MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLC
                     IWLTCPPGEEIQWVIPGLTESIYCQQDGVWRCIAHYRVSPR"
     gene            6294..7154
                     /locus_tag="JQ356_002178"
     CDS             6294..7154
                     /locus_tag="JQ356_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418753.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HAY4622261.1"
                     /translation="MTKSISLSKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNY
                     HATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKD
                     LETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYS
                     RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTL
                     LVLSHESRALQEVTLVGEVIGEISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNR
                     FYRFTPKSSH"
     gene            7222..8394
                     /locus_tag="JQ356_002179"
     CDS             7222..8394
                     /locus_tag="JQ356_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4622262.1"
                     /translation="MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAE
                     GAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPFLLVSALARGLLILAMAWL
                     PPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGL
                     HFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYG
                     LAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLT
                     ANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGF
                     VTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS"
     gene            complement(8407..9063)
                     /gene="kptA"
                     /locus_tag="JQ356_002180"
     CDS             complement(8407..9063)
                     /gene="kptA"
                     /locus_tag="JQ356_002180"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2'-phosphotransferase"
                     /protein_id="HAY4622263.1"
                     /translation="MWKRFCAGLSCRKFINPVTMTLVNKNRKSRDENEMAKHNEKELA
                     DTSKFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQKAGKRLTRALLDTVVATSDKK
                     RFSYSSDGRCIRAVQGHSTSQVAISFAEKTPPQFLYHGTASRFLDEIKKQGLIAGDRH
                     YVHLSADEATARKVGARHGSPVVLTVKAQEMAKRGIPFWQAENGVWLTSTVAVEFLEW
                     "
     gene            9211..9894
                     /locus_tag="JQ356_002181"
     CDS             9211..9894
                     /locus_tag="JQ356_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418750.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622264.1"
                     /translation="MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWR
                     VFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDG
                     LGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELTQEGEITERDKV
                     IFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEER
                     RNPTQGAQA"
     gene            9891..10352
                     /locus_tag="JQ356_002182"
     CDS             9891..10352
                     /locus_tag="JQ356_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622265.1"
                     /translation="MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKI
                     TGLLDWVGHICEPVMALWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTV
                     LLPAMYLMGNPVQNVGRCLGTAEVNAKYYPHIITVCVINALLSIWVMQLIV"
     gene            10365..11537
                     /gene="iadA"
                     /locus_tag="JQ356_002183"
     CDS             10365..11537
                     /gene="iadA"
                     /locus_tag="JQ356_002183"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY4622266.1"
                     /translation="MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPS
                     DIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVG
                     LLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIG
                     VKCAISDHRSAAPDVYHLANMAAESRVGGLLGSKPGVTVFHMGDSKKALQPIYDLLEN
                     CDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIP
                     LARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTS
                     SVAGFLNLSGKGEILPGNDADLLVMTPELRIEQVYARGKLMVKDGKACVKGTFETA"
     gene            11602..12513
                     /gene="hypT"
                     /locus_tag="JQ356_002184"
                     /gene_synonym="qseD"
     CDS             11602..12513
                     /gene="hypT"
                     /locus_tag="JQ356_002184"
                     /gene_synonym="qseD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /protein_id="HAY4622267.1"
                     /translation="MDDCCAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSR
                     RIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRK
                     IKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL
                     EAPFDHIRLFESQLFPVCASDEYGEAIFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS
                     ELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGQLVVLNRDELVIPIQAY
                     AYRMNTRMNPVAERFWRELRELEIVLS"
     gene            complement(12506..12898)
                     /gene="iraD"
                     /locus_tag="JQ356_002185"
     CDS             complement(12506..12898)
                     /gene="iraD"
                     /locus_tag="JQ356_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313312.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraD"
                     /protein_id="HAY4622268.1"
                     /translation="MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPHSALPSLL
                     VSGMPEWQVHNPSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIM
                     LYHDDEPLTFDLVWDNGGWRSVTLENVS"
     gene            complement(12895..12978)
                     /locus_tag="JQ356_002186"
     CDS             complement(12895..12978)
                     /locus_tag="JQ356_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iraD leader peptide"
                     /protein_id="HAY4622269.1"
                     /translation="MENEHQYSGARCSGQAAYVAKRQECAK"
     gene            13569..14399
                     /locus_tag="JQ356_002187"
     CDS             13569..14399
                     /locus_tag="JQ356_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY4622270.1"
                     /translation="MSIPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIY
                     LLPLTRGNNHNYDGKSVVEIRKLNIGKQSWPFNYATDTCREFNGITTTGRMLYRNLKI
                     TSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYA
                     GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGN
                     DPIIGIEAYPGTAEIHAKMGYNVIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
                     "
     gene            complement(14540..15313)
                     /gene="uxuR"
                     /locus_tag="JQ356_002188"
     CDS             complement(14540..15313)
                     /gene="uxuR"
                     /locus_tag="JQ356_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxu operon transcriptional regulator"
                     /protein_id="HAY4622271.1"
                     /translation="MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLD
                     VTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGSHNTDSPDANVCNDAGPFELLQAR
                     QLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATH
                     NSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKL
                     AMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA"
     gene            complement(15528..16988)
                     /locus_tag="JQ356_002189"
     CDS             complement(15528..16988)
                     /locus_tag="JQ356_002189"
                     /EC_number="1.1.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HAY4622272.1"
                     /translation="MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHH
                     LLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALH
                     PEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS
                     AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENV
                     TFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKV
                     GAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTNPDYRKAAFALMMQE
                     QAPTLSMPEGTDLKAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQN
                     GGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLS
                     GIFADDLPQNADFVGAVTAAYQQLCERGARECVAAL"
     gene            complement(17069..18253)
                     /gene="uxuA"
                     /locus_tag="JQ356_002190"
     CDS             complement(17069..18253)
                     /gene="uxuA"
                     /locus_tag="JQ356_002190"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709912.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HAY4622273.1"
                     /translation="MEQTWRWYGPNDLVSLADVRQAGATGVVTALHHIPNGEVWSVEE
                     ILKRKAIVEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCY
                     NFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAE
                     RFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKA
                     IIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYG
                     VRADNDLVDMIKQFGPRIYFTHLRSTMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEE
                     HRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF
                     SR"
     gene            18593..18797
                     /locus_tag="JQ356_002191"
                     /pseudo
     CDS             18593..18797
                     /locus_tag="JQ356_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031542.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19040..>19149)
                     /locus_tag="JQ356_002192"
     CDS             complement(19040..>19149)
                     /locus_tag="JQ356_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4622274.1"
                     /translation="TSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ"
BASE COUNT         4473 a         4871 c         4806 g         4999 t
ORIGIN      
        1 taatgcctgc atttgctctg ccgaaagtcc ggtatatcgt tgtatccatt caggatcggc
       61 cccattctgc aacaacaatc ggaggaggct ccgttcccct tctactttcc cttctttcct
      121 ccccctctcc cttcccaaca gccatccatc attatgaatt cgctctgcaa ttgtcattat
      181 tcgctccctg tggtgtggca ttcgcctggt aagttcgctg ataaacgcct taaaacgcgc
      241 ttcatcgcca gtcagtaaaa tgtaatttaa cagcgcagtt atctggctgt cattagcaca
      301 ctctgtaacc agtaatacta ccagttggtc aataagcccc atcaaatcgc gctggcgaat
      361 atgcttttgg atcaactcca acagggcgac tctgcgatgc tgcacaatct cgtcgtctgg
      421 cacgacagtg acatccacca gcgggaacgc tgcgctataa agtttccgtg cggtagtcgg
      481 ggcggcaaat tcgtccagcc agcacaggga ccaggggtaa ggactacggc taccgtgata
      541 aaacagcatc gggataacca gcggtagcgg ccggcgttta tcatgctcga tatggcgctg
      601 catcaccgcc atggaatatc gcatcaggcg aaatgccata tgaatatcct cgcggctctg
      661 atgttcaatc actacgtaaa tataaccatc accttcacgg gtctttaccg accacagaat
      721 atcggagtgt agcgcccgca atttttcatc gacaaagctg gcggattcca gttttaagct
      781 gtcgagatcg cacagttcac gtaaatcttt gggtaagtgg atctccataa aatcccgcgc
      841 ggtgtcaggg tgagtgagaa aggatttaaa taatgcgtca tgtggcgtgc tggtcgtgaa
      901 gtttgtcatg gcgatccgtc acctgtagat aagatggccc gactttagcg actaacaaaa
      961 ccattctcac ccggcaattt ctcgttcccc gaggtgcttt ccaggcgtct gcaaacgata
     1021 catttttccg gaaacaggct cgcgttttac atttcctgta cccggcagat attccccttt
     1081 ccaccgcgct cttttgatta accgcaaatt ttaattacac ttaaggtgta tattttctat
     1141 gcaacccatc aattaaagag gtgtaatgtg ctgatgacta tttgtaatcg ttatacattc
     1201 tgacctggag tcagaaggta tttctctgtc tgtgtgttca caggcagtgt ggttgattac
     1261 atgaaattca gtacatttgc agtctcgttg cccttctcgc ctgcctttcg tcattaccga
     1321 cggtattgaa tttcgttttc cccgttgggg ttctccgaac aaggagttgt ttgttatgcc
     1381 acgttttttt gcccgccatg ccgccacgct gtttttcccg atggcgttga ttttgtatga
     1441 ctttgccgcg tacctgtcga cggatctgat ccagccgggg atcattaatg tggtccgtga
     1501 ttttaatgcc gatgtcagtc tggccccggc agccgtcagt ctctatctcg cgggcggtat
     1561 ggcgttacag tggctgctgg ggccgctttc cgacaggatt ggccgcaggc cggtgctgat
     1621 taccggggcg ctaatattta cccttgcctg cgctgcgaca atgttcacaa cgtctatgac
     1681 acagtttctt atcgcgcgtg caattcaggg caccagtatc tgttttattg ccaccgttgg
     1741 ttatgtcacg gtgcaggagg cgttcggcca gacacaaggg atcaagttga tggcgattat
     1801 cacctccatc gtactgattg cgccgattat tggcccgctt tccggcgcag ctctgatgca
     1861 ctttgtgcac tggaaagtcc tttttgccat cattgcagtt atgggtttta tctcatttgt
     1921 tggcttactg ctggcgatgc cagagacggt gaagcgcggc gcggttccat ttagcgccaa
     1981 aagcgtcttt cgcgattttc gtaatgtctt ttgcaatcgg ctgttcctct ttggcgcagc
     2041 aaccatctct ttaagctata tcccaatgat gagttgggtg gctgtctcgc cggtgatcct
     2101 gatcgacgcg ggcagcttaa caacttcgca gttcgcctgg acacaggttc cggtgttcgg
     2161 cgcggtgatt gtcgcgaatg ccatcgtggc gcgtttcgtt aaagatccga ccgaaccgcg
     2221 ctttatctgg cgtgctgtac ccattcaact ggtcggcctc gcgctgttga ttatcggcaa
     2281 tctgctgtca ccgcacgtct ggctgtggtc ggtgctgggc accagtttgt atgctttcgg
     2341 gattggtttg atcttcccga ccttattccg ctttacgctt ttttccaata acttaccgaa
     2401 agggaccgtc tccgcatcgc tgaatatggt gatcctgatg gtgatgtctg tctcggtcga
     2461 aatcggccgc tggctgtggt ttaacggcgg tcgcttgccg tttcatctgt tagccgtcgt
     2521 ggcgggcgtt atcgtcgttt tcaccctggc aggattgctt aatcgcgtgc gccaacatca
     2581 ggctgccgag ctggcggagg agcggtgatt tttgcgcgat cctgccgtca ggctctattc
     2641 ttaacgttat gaataaactc attgaactca gacgcgccaa aatgttggcg ctctctttac
     2701 tgcttatcgc cgctgctacc tttgtcgtta cgctgttttt gccgcccaat ttttgggtga
     2761 gcggcgtgaa ggcgattgct gaagcggcga tggtcggcgc gctggcggac tggtttgcgg
     2821 tggtggcgct gtttcgccgc gtgccgattc cgatcatttc tcgtcatacg gcgattatcc
     2881 cgcgtaataa agaccggatt ggcgaaaatc tcggtcagtt cgtgcaggaa aaatttctcg
     2941 atacccagtc gctggtggca ttgattcgac gtcacgaacc ggcgttgttg attggcaact
     3001 ggtttagtca gccggagaac gcccgccgcg ttggtcagca tctgttgcag atcatgagcg
     3061 gttttcttga actgaccgat gatgcgcgta ttcagcgcct gcttaagcgc gcggtccatc
     3121 gggcgattga taaggtcgat ctttccggaa ccagtgcgtt gatgctggag agtatgacca
     3181 aaaacgatcg tcatcaggtg ctgctcgata cgctgatcgc acagttgatc gcccttctcc
     3241 agcgcgataa atcgcgcaag tttattgccc agcaaattgt tcgctggctg gagagcgagc
     3301 atccgctgaa agccaaaatt ttgcctactg aatggctggg cgaacatagc gcggagttgg
     3361 tttctgacgc ggtgaattct ttgcttgatg atatcagccg cgatcgtgcg catcagatcc
     3421 gtcatgcgtt tgatcgcgcc acttttgccc tgatcgacaa gctgaaaaac gatccagaaa
     3481 tggcagcgcg agccgatgcc gtaaaaagtt atctgaaaga agatgaagct tttaaccgct
     3541 atctcagtga attgtggggg gatttacggg aatggctgaa agcggatatc aacagtgaag
     3601 attctcgtgt gaaagaacgt atcgcgcggg cgggtcaatg gtttggcgaa acgttaattg
     3661 ccgatgatgc cttgcgggca tcgttaaatg gtcacctgga acaagccgcg caccgcgtcg
     3721 cgcctgagtt ttccgcattc ctgacgcgcc acatcagcga tacagtaaaa agctgggatg
     3781 ctcgggatat gtcgcggcaa atcgagttaa atatcggcaa agatctgcag tttatccgtg
     3841 tcaacggtac gctggttggc ggttgtattg ggctaatttt atatttgttg tcgcagctcc
     3901 cggccttgtt ccccctcagc aatttttaga aatccatgaa aaactaagtg gctaaccgcg
     3961 agagagatca aataaaccac actaaaagaa tggtaataat gtggcctctt ttcattatct
     4021 cccgtggtac ggggaaggaa aatcatgtca cttatcaccg atctacccgc cattttcgat
     4081 cagttctctg aagctcgcca gaaaggcttt ctcaccgtca tggatctcaa ggagcgcggc
     4141 attccgctgg ttggcactta ctgcaccttt atgccgcaag agatcccgat ggcagccggt
     4201 gcggttgtgg tttcgctctg ttctacctct gatgaaacca ttgaagaagc ggagaaagat
     4261 ctgccgcgca acctctgccc gctgattaaa agcagctacg gcttcggcaa aaccgataaa
     4321 tgcccctact tctacttttc ggatctggtg gtcggtgaaa ccacctgcga cggcaaaaag
     4381 aaaatgtatg aatacatggc ggagtttaag cccgttcatg tgatgcagtt gccgaacagc
     4441 gttaaggacg atgcctcgcg tgcgttatgg aaagccgaga tgctgcgctt gcaaaaaacg
     4501 gtagaagaac gttttgggca cgagattagc gaagatgctc tgcgcgatgc cattgcgctg
     4561 aaaaaccgcg aacgtcgcgc actggccaat ttttatcatc ttgggcagtt aaatcctccg
     4621 gcgcttagcg gcagcgacat tctgaaagtg gtctacggcg caaccttccg gttcgataaa
     4681 gaggcgttga tcaatgaact ggatgcaatg accgcccgcg ttcgtcagca gtgggaagaa
     4741 ggccagcgac tggacccgcg tccacgcatt ttaatcaccg gctgcccgat tggcggcgca
     4801 gcagaaaaag tggtgcgggc gattgaagag aatggcggct gggttgtcgg ttatgaaaac
     4861 tgcactgggg cgaaagcgac cgagctaatg cgtggcggaa acgggcgatg tctacgacgc
     4921 gctggcggat aaatatctgg cgattggctg ctcctgtgtt tcgccgaacg atcagcgcct
     4981 gcaaatgctc agccagatgg tggaagaata tcaggtcgat ggcgtagttg atgtgatttt
     5041 gcaggcgtgc catacctacg cggtggaatc gctggcgatt aaacgtcatg tgcgtcagca
     5101 gcacaacatt ccttatatcg ctattgaaac agactactcc acctcagatg tcgggcagct
     5161 cagtacccgt gtcgcggcct ttattgagat gctgtaagga gtggcagtga catattcgat
     5221 tggcattgat tctggttcta ccgccaccaa agggatctta ctggcagacg gcgtgattac
     5281 gcgccgtttc ctcgttccaa caccctttcg tccggcaaca gcaattactg aagcctggga
     5341 aactctgcgc gaagggttag agacaacgcc gtttctgacg ctcaccggct atggacggca
     5401 actggtggat tttgccgata aacaagtgac ggaaatctcc tgtcacgggc tgggcgcacg
     5461 gtttcttgcg ccagcaacgc tgcgcggtaa tcgacatcgg tggtcaggac agcaaagtga
     5521 ttcagcttga tgatgacggt aacctgtgcg atttcctgat gaatgacaaa tgcgcggcgg
     5581 gcaccgggcg tttcctggaa gtgatctcgc gcacgcttgg caccagcgtc gagcaactcg
     5641 acagcattac cgaaaatgtc acgccgcatg ccatcacgag tatgtgcaca gtgtttgccg
     5701 aatcagaagt gatcagcctg cgctcagcgg gcgtcgcgcc agaagcgatt ctcgccggag
     5761 tgattaacgc gatggcgcgg aggagtgcca atttcattgc tcgtctctcc tgtgaagcgc
     5821 cgattctgtt tactggtggc gttagtcatt gccagacgtt tgcccggatg ctggaatctc
     5881 acctgggaat gccggtaaat acccatcctg atgcgcaatt tgctggcgca attggcgcgg
     5941 cggtaattgg tcaacgagtg aggacacgcc gatgaaagag tttttatttt tatttcactc
     6001 cacagtcggc gtcatacaaa ctcgcaaagc gttgcaggca gcgggcatga cttttcgcgt
     6061 cagcgatatt ccccgtgatt tacgcggcgg ctgcgggtta tgcatttggc tgacctgtcc
     6121 ccccggcgaa gaaatacaat gggtgatccc tgggctgact gagtcaattt attgccagca
     6181 ggatggtgtc tggcgctgca ttgcacatta ccgggtttct ccgcgttaag gattcattaa
     6241 ggtcgctacg tatacttctc gatatcttat tgatttgcct taaagggatt accgtgacaa
     6301 aaagtatttc gttaagtaaa cgcatctccg ttattgtgat tctttttgcc attgtggcag
     6361 tgtgtacttt cttcgtgcaa tcttgcgccc gtaaaagcaa tcatgcagca tcatttcaga
     6421 attaccacgc caccattgac ggcaaagaaa ttgcaggcat aacgaataat atctcttcgc
     6481 tgacctggtc ggcacaaagc aatactcttt ttagcactat caacaaacct gccgccattg
     6541 ttgaaatgac caccaatggt gattttatcc gcacaattcc tctggatttt gttaaggatc
     6601 tcgagacgat cgaatacatt ggcgataatc agtttgtcat tagcgatgag cgcgattacg
     6661 ccatttatgt gatttcactg accccaaact cggaagtaaa aatcctcaaa aaaataaaaa
     6721 tcccgctgca agactcccca accaattgcg gttttgaagg gttagcttat tctcgccagg
     6781 atcacacttt ctggtttttt aaagagaaaa atccgattga ggtctacaaa gttaacgggc
     6841 tgttaagtag caatgaatta cacatcagca aagacgaggc actacaacgg caatttactt
     6901 tagatgatgt gtccggcgca gaatttaacc agcaaaaaaa tacgcttctg gtgctgtctc
     6961 atgaatctcg cgcactccag gaagtaaccc tggttggcga ggttatcggt gaaatatcac
     7021 taaccaaagg tagtcgaggt ttgtcgcata acatcaaaca ggccgaaggg attgcgatgg
     7081 atgcctctgg taatatttat atcgttagcg aaccaaatcg tttttatcgc tttaccccta
     7141 aatcatcgca ttaacaggct ggcatatttc acctttttgt tattaacttg ttaacaacaa
     7201 aaatgacata caaggttaaa catgccttcg tcctcgcatc ccgtagaacg cttttctttc
     7261 agcaccgcgc ttttcgggat gctggttctg accctaggta tgggattagg tcgcttcctt
     7321 tatacgccta tgttgcccgt cattatggcg gaaggggcgt tttcatttag ccagctctcg
     7381 tggattgcca gcggcaacta tgcggggtat ctggctggca gtctgctatt ttcgtttggc
     7441 gcatttcacc agccgtcgcg cctacgccca tttctgttgg tttctgccct ggcgagaggg
     7501 ttgttgatcc tcgcaatggc atggttgccg ccatttattc tggtgttatt gattcgcttc
     7561 ctggcgggtg tcgccagcgc cggtatgctg atttttggtt cgacgctgat tatgcagcac
     7621 acgcgccatc cttttgtgct ggcagctttg ttttctggcg ttggcattgc actgggcaac
     7681 gaatatgttc tggcaggcct gcattttgcc ttctcctcgc aaacgttatg gcaaggcgcc
     7741 ggggcgcttt ctggcatgat gctgatcgca cttacgcttt taatgccctc gaaaaaacac
     7801 gccatcgcac caatgccatt ggcaaaaacg gagcaacaga taatgagctg gtggttactg
     7861 gctattctgt acggccttgc gggatttggt tatatcatcg tcgcgactta cctgccgctc
     7921 atggcgaaag atgcaggctc accattgtta accgcccatc tctggacgtt agtcggctta
     7981 tcaattgtgc caggctgctt tggctggcta tgggcagcaa aacgttgggg ggctttgcct
     8041 tgcctgacgg cgaatttgct ggtgcaggct atcagtgtgc tgcttactct cgccagcgac
     8101 tctcctctct tgcttatcat tagtagtatc ggttttggcg gtacctttat gggcacgaca
     8161 tctctggtga tgactatcgc ccgccaactg agcgttccgg gaaatctcaa tcttttaggc
     8221 tttgtgacgc tcatttacgg cattggacaa atcctcggcc cggcgctgac cagtatgctc
     8281 ggcaatggaa catcggcgct tgccggcgcc actctctgcg gcgcggcggc gttgtttatt
     8341 gctgcgctta tcagcacagt acaattattt aagctgcaag tggtcacttc atgaggagtg
     8401 tttcccttac cactcaagaa attcgaccgc aaccgttgat gtcagccaga ctccgttttc
     8461 cgcttgccag aaaggaatgc ctcgtttcgc catttcctgt gctttgacgg ttaagacaac
     8521 cggcgatccg tgtcttgctc ccactttgcg tgccgttgct tcatcagcag agagatgcac
     8581 gtaatgacga tcccctgcaa tcagcccctg tttttttatc tcgtcaagga aacggcttgc
     8641 cgtaccgtgg tagagaaact gtggcggtgt tttttcggca aaggaaatag cgacctgcga
     8701 agtcgaatgc ccctgaaccg cgcggatgca cctaccatca ctggaataac taaaacgctt
     8761 tttatcgctg gttgcgacca cggtatccag caatgcacgg gttaatcgct tgcccgcttt
     8821 ttgggcacaa agtatgagct tatcgatatc cgcccatcct tcacggtcca gtacgatacc
     8881 aatcgcctcc ggtttgtgtc ggaggacaaa acttaaaaac ttgctcgtat ccgccagctc
     8941 tttttcgttg tgctttgcca tctcgttttc gtccctggat tttctgtttt tatttaccaa
     9001 tgtcattgtc actgggttta tgaattttct gcaactcaat cctgcgcaga accttttcca
     9061 cacagcgtaa tgtttcccct atgcaaaaaa cgcatagcca gaaacatact tgcattttcc
     9121 ccatacccac atggctgata aggtttttca gttccaggaa ttttcctggc tcaagcaaca
     9181 cacaaacaca aaaaaacaat ggggattgtt atgacacaac aaggggatgc tgtagccggg
     9241 gagctggcga cagaaaaagt gggcattaaa gggtatctgg ctttttttct caccataatc
     9301 tttttttccg gtgttttttc cggaacagac agctggtggc gcgtttttga tttttccgtt
     9361 ctgaacggat cgtttgggca actgcctggt gcgaacggag ccaccacctc atttcgcggc
     9421 gcgggtggtg cgggggctaa agatggcttt ctctttgcgc tggagctggc accgtcagtc
     9481 attctctctc tggggattat ttcaattacc gatggtcttg gtggattacg cgccgcgcag
     9541 cagttaatga cacctgtgct aaaaccgttg ttgggcattc cagggatctg ctcgctggcg
     9601 ctgatcgcta acttgcaaaa cactgatgcc gccgccggta tgaccaaaga gctgacgcag
     9661 gaaggtgaaa ttaccgaacg cgataaagtg attttcgccg catatcaaac cagcggtagc
     9721 gccatcatca ccaactactt ctcttccggc gtcgcggtgt tcgcctttct gggcacgtcc
     9781 gtaatcgtac ctttagccgt catcctggtg tttaaatttg tcggagccaa cattttgcgc
     9841 gtctggctta acttcgaaga acgtcgcaac ccaacgcaag gagcgcaagc atgacaactc
     9901 aggtccgcaa aaacgtcatg gatatgttta tcgatggcgc gcgccgtggc tttactatcg
     9961 ccacgaccaa cctgctgcca aacgtggtga tggcgtttgt catcattcag gcgctgaaaa
    10021 ttaccggcct gctcgactgg gtggggcata tctgtgaacc cgtaatggcg ctgtggggat
    10081 tacccggtga agcggcaacc gtccttttag ccgcattaat gagtatgggg ggcgcagtcg
    10141 gtgttgccgc cagtctggca accgctggcg cattaaccgg tcacgatgtc accgttttac
    10201 tgcccgcgat gtatttaatg ggcaacccgg tgcaaaatgt cggtcgctgc ctggggacag
    10261 ccgaagtgaa tgccaaatat tacccgcata tcattacggt ctgcgtgatt aacgcattgc
    10321 tgtcgatctg ggttatgcag cttattgttt aacaaggagt taccatgatt gattataccg
    10381 cagccggttt taccctgctg cagggagcgc atttgtatgc gccggaagat cggggaattt
    10441 gcgatgtcct cgtcgctaac ggcaaaatta tcgccgttgc cagcaatatc ccttctgaca
    10501 ttgtaccgaa ctgcacggtt gtcgatctca gtgggcagat cctctgccca ggttttattg
    10561 atcaacacgt ccatttgatt ggcggtggcg gcgaagcagg tcccacgacg cgcacgccgg
    10621 aagtggcgct aagtcgcctg acggaagcgg gcgtcacgtc agtggttggt ctgctgggca
    10681 ccgactctat ctctcgccac ccggaatccc tgctcgccaa gacccgtgcg ctcaatgaag
    10741 aaggcatcag cgcctggatg ctgaccggcg cttatcatgt cccttcccgc actattacgg
    10801 gttccgtgga aaaagacgtg gcgattatcg atcgtgtgat tggcgtgaaa tgcgccatct
    10861 ctgatcaccg ttctgccgca ccggacgttt atcacctggc taatatggcg gcagaatccc
    10921 gcgttggcgg tttgctcggc agtaaacctg gcgtcaccgt gttccacatg ggcgacagta
    10981 aaaaggcgtt acagcctatt tatgacctgc tggaaaactg cgatgtgccg atcagcaagc
    11041 tgctgccgac ccacgttaac cgcaacgtac cgttgtttga gcaggcgctg gagttcgcgc
    11101 gcaaaggcgg caccatcgat atcaccagca gcattgacga accggtcgcc cctgccgaag
    11161 gtattgcccg cgccgttcag gcgggtattc cgctggcacg cgtcaccctc agctccgacg
    11221 gcaacggtag ccagccgttc ttcgatgacg aagggaattt aacccatatc ggtgttgcag
    11281 gttttgaaac gttgctggaa accgtgcagg tgctggtcaa agactatgat ttcagtatca
    11341 gcgatgccct gcgcccgctc accagtagcg tagccggttt ccttaacctg agcgggaaag
    11401 gcgaaattct gcctggcaat gacgcagact tactagtcat gacgccagaa ttgcgcattg
    11461 agcaggtata tgctcgcggc aaactgatgg tcaaagacgg caaagcctgc gtgaaaggaa
    11521 cgtttgaaac ggcttaaacg gttgtcagcc gccctaatgg acgtagaatg cccgcaaggg
    11581 cggctgacag agtaaaacgt aatggatgac tgttgtgcgg ttttgcataa tattgaaacc
    11641 aaatggcttt atgattttct gaccctggaa aaatgccgca atttttccca ggcggcagtc
    11701 agtcgtaacg tctcgcaacc ggcattcagc cgccgcatcc gcgcgctgga acaggcgatt
    11761 ggcgttgaat tgtttaaccg ccaggtgacg ccgctgcaac tctcagaaca agggaaaatc
    11821 ttccattcgc agatccgcca tctgttgcaa cagttagaaa gtaaccttgc agagctgcgt
    11881 ggcggcagcg attacgcgca acgtaaaatc aagatagccg ctgcacactc tctttccctc
    11941 ggtctgttac cgtccattat cagccagatg ccgccgctct ttacctgggc gattgaagct
    12001 attgatgtcg atgaagcagt cgataaactg cgtgaagggc aaagtgactg tattttttcc
    12061 tttcacgacg aagatttgct ggaagcaccg tttgaccaca ttcgcttatt tgaatctcaa
    12121 ttgttccccg tttgcgccag tgacgaatac ggagaagcaa tttttaacct cgcgcagcca
    12181 cactttccgt tactgaatta cagccgcaac tcctacatgg ggcgattgat taatcgcacc
    12241 ctgacgcgcc acagcgagtt aagtttcagc accttttttg tctcttcgat gagcgagcta
    12301 ttaaagcagg ttgccctcga cggctgtggg attgcctggc tgccggagta tgccatccaa
    12361 caagaaattc gcagcgggca actcgttgtg ctgaatcggg acgaactggt gatcccgatt
    12421 caggcctacg cataccgtat gaatacccgc atgaatccag ttgccgaacg cttctggcgt
    12481 gaactgcgcg agctggagat tgtgcttagc tgacattctc aagcgtcaca ctgcgccaac
    12541 cgccattatc ccagaccaga tcaaacgtta gcggttcatc gtcgtggtac agcattatct
    12601 caaggctgat cgccagagtg tggcagtacg cttctttcaa attaacctgc aacgccgcaa
    12661 tccgtggctc atgaaataac agtgcagaac gcagctgacg gcaataccag ctctggagat
    12721 gtttgtcgct cgggttatgc acttgccact cgggcatgcc tgaaacaagt aatgacggta
    12781 atgccgaatg aggagaatta aaaagagtga ggagatcgct gcataccgat ttacgcagca
    12841 atgacgtttt attgcctgaa atttcaggta aaacagcctg aagtgattgg cgcatcattt
    12901 tgcgcactcc tgacgtttag caacatatgc ggcttgccct gaacaccggg caccactgta
    12961 ttgatgctca ttttccatag ccattccctt ttgttcatta catccatgtc agtctgagac
    13021 aggcctgaat cctgtcagca aagtataaaa ccttacttgc ctatgaatat ctactgactt
    13081 ttcaggaaaa aagtcatgat ttgataaaaa tcatcaaact caaaaaaaac cgctagtata
    13141 ttctgaatat tccgaatagt tacgtagatg aaaatacttg tcaccgccgc tacttaattc
    13201 cggtggaaaa ttatttattt ccgcataatc agccatgtat tatttgaaac aattagtttg
    13261 taaataatat aaattgataa catatcaaat acatcaaaaa taccattcat aggcattatt
    13321 aatatagaca tcaatatagc aacatcaaat tccaattagt aataagatat gctttttaat
    13381 tgcatgaaaa taatttcaaa tgagcgtttt ttgatacttt agagtgtttc ctacccttta
    13441 atatcaccgt gtagagttga tatcactaca acagaaacat gcatgtcatt tttttacttc
    13501 ttttttacta cagaaaaatt tatctatttt tctaaacatc ggtgaaatac tcataaaagg
    13561 taactattat gtctatacca ttaagcaatg cccttcagag tcaaattatt acagataatc
    13621 acttccttca tcatccaaaa gtcgacaata agttaacacg tgaatatgaa tatacacgca
    13681 tggatacgga aaatatctat cttctgcctc ttactcgtgg aaataaccat aattacgatg
    13741 gaaaaagcgt tgtcgaaatt agaaaactta atattggcaa acagtcctgg ccatttaatt
    13801 atgcgacaga tacatgcaga gaattcaatg gtattacaac aacaggacgt atgctctatc
    13861 gaaacttgaa aatcacctca gctttagacg aaatatatgg tggcatatgt aaaaaggcgc
    13921 atgctgctac agagttagca gaaggtttac ggctaaattt atttatgaag agccctttcg
    13981 atcctgttga ggactataca gttcatgaaa taacattagg ccctggttac aatgttcctg
    14041 gttatgccgg aaccacgata ggatatattt caacccttcc agcttctcag gcaaaaagat
    14101 ggaccaatga gcagccaaga attgatatct atattgatca gataataact gtctcagggg
    14161 tggcaaattc ttccggattc gcccttgccg cattacttaa tgctaatatt ggaatgggaa
    14221 atgacccaat aattggtata gaagcctatc ctggtaccgc ggagatccat gcaaaaatgg
    14281 gatataacgt tatccccggt gatgaagatg cgccactcaa acgcatgact ctgcaaccgt
    14341 catctcttcc agaactgttt gaattaaaaa atggtgaatg gaattatatt ggcaaataac
    14401 cactgagaag aatgagtact aacattcagg ttatatagat atttaaacaa taccctgcaa
    14461 tttacaaagt aatactcatt gcgacttctt aatttaagaa agcgcaagga acgtttaccc
    14521 ttgcgcttat cataatcagt caggcgtcga ctttatccag cggccatgaa tcaaacagat
    14581 agccgtcaaa ataaatatcg tcaacgttcg agaattccag cagacgttgc ttaacgtttt
    14641 ccagatgctg ccacattgcc agcttcgccg ctcgggcatc ttttttgatt aacgcggcaa
    14701 ggatctgttt gtgatcgccc aaccactctt tgcgatacag gctgtcatcc agatggctgt
    14761 gcaactggat ccacattgga ttgttttccc gccactgcca ggactgacgg aataactcca
    14821 ccagcatgct gttatgcgtt gcttcagcaa tggcgagatg gaactgcatg tcaccgcttt
    14881 cgctgctacc cggcgcgctg gaagccagtt cacgctcttc cagttgcaat gcctgacgca
    14941 ttttgacgat atcttcgcgg gtagcctgca gggcggcaaa ttccgcgatg ttgctctcaa
    15001 gaagctgtcg cgcctgcaac aattcaaagg ggccggcatc attgcagacg ttggcatccg
    15061 gactgtctgt gttgtggctg cctgagctat caagaacata gataccggca ccccggcgca
    15121 cttccaccag ccctttgatc tccagcatga tcagcgcttc acgtaccacc gtccgcgtga
    15181 catcaagcat ttctgcaatt tcacgctccg gcggcagccg ttcgccagga ttgtacggcg
    15241 tctttatgat cagatcgcgg atcatcgccc cgacttcctg gtaaggtctt tgcgcagagg
    15301 tggcagattt catggtgttg tgtccgttag gtgcggttaa tcaaattttt gccggatgcg
    15361 gcgtgaacgc cttatccggc ctacaacggg caattttacg gcccccgtta atctcaaact
    15421 ataccattag cactggaagt tggcacgtac aggtgggcaa aaaaacgaaa actggtcaac
    15481 caaatatcag tttgattgac cagtaagtct gtagggtaat cagttagtta cagcgcagcc
    15541 acacactcgc gcgcaccgcg ttcgcacagc tgctgatatg ccgccgtcac cgcgccaaca
    15601 aagtcggcat tctgcggcag atcatcggca aaaataccgc tcaggcccag cagcgctttc
    15661 acgcggtctg cgccctgata ctgcgcgtta atcttctgga actcggccag catcgggtcg
    15721 accacgtcaa tggcattacc ctgctcatcc acgccctggg tgtaacgcat ccagccagcc
    15781 acgcccagcg ccaggtgacg ccagctgccg ccgttttgca ggtgcagacg caccgggtcc
    15841 agcagacgct gcggtaactt ctggctgccg tccatcgcaa tctgccaggt acggtgacgc
    15901 agagacgggt tgctgaaacg ctcgatcagc agcgtcgcat aggccttcag gtccgtaccc
    15961 tccggcatag acagcgttgg cgcttgttcc tgcatcatca gggcaaaggc cgctttgcga
    16021 taatccgggt tagtcatggt gtcggcaata gtttcatagc cgccgaggta accgaggtat
    16081 gccaggaaag agtggctgcc gttcagcata cgcagcttca tcatttcgaa cggcacaacg
    16141 tctgcaacga actgtgcgcc cactttatcc cagtccgggc gaccattaac gaagttatct
    16201 tcaatcaccc actgacggaa cggttcgcag gcaatggcgc acgggtcgta aacacccagc
    16261 tggtcagcaa tttcctgtaa ggtttctggc gtcgccgccg gaacgatgcg gtcaaccatg
    16321 gtgcacggga aggtgacgtt ctcttcaatc catgccgcca gctgcgggtc acgtgcctga
    16381 gccagcccca gtaccgcgac cttcgccaca tgaccgtttt cacgcacgtt atcgcaggac
    16441 atcaccgtaa atgctttcag ccctttttca cgacgcagac gcaaggcttc gacgatgtaa
    16501 ccaatcgcgg acttcggcgc agtcgggttt tctagatcgt gcttgatcag cgggttattg
    16561 agatccagtt gaccgcttgc cgcatcagcg cagtagcctt tttccgtgac cgttagagag
    16621 acaatcgccg tttgcggacg cgccatcgcg ttgagaatac cttcgcagcc gtcgatttcc
    16681 ggatgcagcg cttctttcat cgaaccgata attttcagct cggtgctttc tgcgcctttt
    16741 tccgctacgg tgtacagcag ttgctgtttt ttcaggtttt cgatcagcac gcggtcgttg
    16801 cctggcatca ggttaacttc gcagatgccc cagtcgctgt cggtgctttc cagcagatga
    16861 tgggtataca gcgcctgatg tgcgcggtga aacgccccgc aaccgagatg cacaatgcgt
    16921 gattccagac gagaatgatc ccatgacgga cgggcaaccg gcagattgct gtcaacaata
    16981 gtagtcatcg taaactccag aatccgtctt cagagagtga cggcaaggaa gaaggaaccg
    17041 gcacggcgcg cagccatgcc ggtggatatt aacggctaaa gaaagcgcgc tggatcgcca
    17101 gttcgacacc gcgaacttcg gccaggcctt tcagacgacc aattgcggag taacctgggt
    17161 tggttttctt cttcaggtcg tccagcatct gatgaccgtg gtccggacgc atcgggatca
    17221 ggtcttcttt gccttccgct ttacgacggt gttcttcttc aacaatcgct ttcaccactt
    17281 cgtacatatc aacgtcaccg ttcaggtgcg ccgcttcgtg gaaggttttc gggttatctt
    17341 cacgcatggt ggagcgcaga tgggtgaagt aaatacgcgg accgaactgc ttgatcatat
    17401 caaccagatc gttgtcagca cgcacgccgt aggaaccggt gcacatggtg aaaccgttcg
    17461 ccatgctgtt tacggtatca accatccact gcatatcttc aatggtggaa acaatgcgcg
    17521 gcaggccgag gatcgggcgc ggcggatcgt ctgggtgaac cgccatacgc acgccaactt
    17581 cttcagcaac tggaataatc gctttcagga agacggcaaa gttttcgcgc agcttcgctt
    17641 tatcgatatc tttgtacagc tccaggtgct tacggaactg gtcgagggta tacccttctt
    17701 ccgcgcccgg cagaccggca atgatgttac gcgtcagacg cgctttgtct tcatcgctca
    17761 tagtggcgaa gcgttcagct gcctgagcaa tttcttcttc ggtgtaatcc gcttccgcgc
    17821 ctggacgttt caggatatgc atttcgaatg cagcgaattc gatctggtcg aagcgcagag
    17881 ctttggagcc gtctggcagc acgtattcga ggtcagtacg ggtccagtcg agcaccggca
    17941 tgaagttgta gcacacggtg cgaatgccgc actgcgccag gttgcgcaga gtctgctgat
    18001 agttagcgat ccactgctca tagttgccag tgtgggtttt gatatcttcg tgaattggta
    18061 cgctttctac gacagaccac accaggcctg cgtcttcaac gatcgccttg cgtttgagga
    18121 tctcttctac ggaccatact tcgccgttcg ggatatggtg cagcgcggta accacgccag
    18181 ttgcgcccgc ctgacggaca tcagctaaag aaaccagatc gtttgggccg taccagcgcc
    18241 aggtctgttc catgattttt cctctttcac atagtgggtt ccacagcaaa gagacgcgga
    18301 accctggagt tgtttaggta tccggatgaa caaccagacc gcagccgtgg cgttgcatcg
    18361 gatgagatgg cgtataagtt ctaccttttg gtaagatatg tcaacccaaa tcctgaaatt
    18421 ggttaaccaa atcacaagaa tttcactctc atggttgttg ctgcaaattg cagcaaaagg
    18481 taatcgatgg ttattgatca gaggatgtga cattcatcgc aacaatggtt gaccaattta
    18541 cataacatgt cgcccaaaat aacaacggtt caaccaggta aggtaaaacg ttatgcatgt
    18601 gcttaacatt ctctgggtag tattcggcat tggtctgatg ctggtactga caacgaccgc
    18661 aggttcagac acattcactg cattagcaat gcctcttaga ttattttgac ctgtcagtaa
    18721 aagacacgtt gaaaacctgg ggtctgctgg aactggtcaa ctccgtggtt gggctgatta
    18781 ttagcaaggt agcgtaaaag aacaccagag cctgccaatg gcaggctctg actgatgaca
    18841 aagtctaaaa atgtgcccgg acagtcccct cgcccctccg gggagagggt tagggtgagg
    18901 ggaacagacc agcaaagtgc gctttgttta tgccagatgc gacgctgacg cgtcttatct
    18961 ggcctacaaa gggctaacgt gcaggttttt agcttcaggt aatattgcgt aactgcatta
    19021 gcaatgccct gtgatttctt tattgataaa caaaagtcac gccaataatc gattgcacat
    19081 tccctgcagt cacctgccct ccggtacgtg cgtaatttgc cgttaatccc agacttaccg
    19141 ccgaagttc
//
LOCUS       DADKRT010000076        18929 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.077, whole genome shotgun sequence.
ACCESSION   DADKRT010000076 DADKRT010000000
VERSION     DADKRT010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18929
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.077"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(32..2479)
                     /gene="glgP"
                     /locus_tag="JQ356_002193"
     CDS             complement(32..2479)
                     /gene="glgP"
                     /locus_tag="JQ356_002193"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HAY4622275.1"
                     /translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
                     EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
                     IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
                     LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
                     FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
                     DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
                     TIKEYADHIWHIDPVRL"
     gene            complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="JQ356_002194"
     CDS             complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="JQ356_002194"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HAY4622276.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
                     PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
                     YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
                     HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
                     ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
                     KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
                     QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
                     PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRASLWRF
                     VQRQAMAMDFSWQVAAKSYRELYYRLK"
     gene            complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="JQ356_002195"
     CDS             complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="JQ356_002195"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HAY4622277.1"
                     /translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
                     DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
                     VGTLKAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
     gene            complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="JQ356_002196"
     CDS             complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="JQ356_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HAY4622278.1"
                     /translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
                     HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
                     EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKG
                     LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
                     WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
                     FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
                     FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
                     NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
                     VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
                     NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
                     GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
     gene            complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="JQ356_002197"
     CDS             complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="JQ356_002197"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HAY4622279.1"
                     /translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
                     DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
                     LICGLPEKVVQTEERKKANQFDASISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
                     DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
                     WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
                     SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
                     GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
                     SMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
     gene            complement(9673..10776)
                     /gene="asd"
                     /locus_tag="JQ356_002198"
     CDS             complement(9673..10776)
                     /gene="asd"
                     /locus_tag="JQ356_002198"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY4622280.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
                     PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
                     MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
                     YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
                     GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
                     AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
                     LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            10968..11561
                     /gene="yhgN"
                     /locus_tag="JQ356_002199"
     CDS             10968..11561
                     /gene="yhgN"
                     /locus_tag="JQ356_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YhgN"
                     /protein_id="HAY4622281.1"
                     /translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
                     LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
                     EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
                     RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
     gene            complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="JQ356_002200"
     CDS             complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="JQ356_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY4622282.1"
                     /translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGPLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH
                     YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
                     GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="JQ356_002201"
     CDS             complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="JQ356_002201"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417894.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HAY4622283.1"
                     /translation="MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHP
                     RRNIEKMASGEPLNDDDRKPWLQALNDAAFAMLRTNKVSLIVCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
                     EGVVASTIEVIKKGK"
     gene            complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="JQ356_002202"
     CDS             complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="JQ356_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HAY4622284.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTTAIIARGHCHIAYLGARLDERTIIKQKGYEQAMLDAGLVSYSVMVE
                     QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
     gene            complement(14847..15542)
                     /locus_tag="JQ356_002203"
     CDS             complement(14847..15542)
                     /locus_tag="JQ356_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY4622285.1"
                     /translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
                     DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
                     EYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            complement(15665..16702)
                     /locus_tag="JQ356_002204"
     CDS             complement(15665..16702)
                     /locus_tag="JQ356_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY4622286.1"
                     /translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
                     APIYSHIHFISDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
                     AQAKELFALAKSKGLSVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
                     LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGV
                     PEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFE
                     QASPSTVTLAN"
     gene            17034..17522
                     /gene="yhhY"
                     /locus_tag="JQ356_002205"
     CDS             17034..17522
                     /gene="yhhY"
                     /locus_tag="JQ356_002205"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY4622287.1"
                     /translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
                     LADRPGIKQLVACIDGDVVGHLTIDVQQRPRSSHVADFGICVDSRWKNRGVASALMRE
                     MIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR
                     VK"
     gene            17759..18929
                     /gene="hcp"
                     /locus_tag="JQ356_002206"
                     /pseudo
     CDS             17759..18929
                     /gene="hcp"
                     /locus_tag="JQ356_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417899.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT         4836 a         5015 c         4605 g         4473 t
ORIGIN      
        1 ccctttggcc ccgttctatt tattggtgaa cttacaatct caccggatcg atatgccaga
       61 tatgatcggc gtactctttg atagtacggt cagaagagaa gtagcccata ttggcaatgt
      121 tcagcatcgc ttttgcggtc cactcttcct gaagctcgta gagttcgtcg actttatcct
      181 gacaatcgac atagctgcga taatccgcca gaacctgata gtgatcgccg aagttgatca
      241 gcgaatcaac cagatcgcga tagcgacccg gatcttccgg actgaataca ccgctgccga
      301 tttgcgtcag cacctgatgc agctcctcat ctttctcgta gtattcacgc ggtttgtagc
      361 cctgacgacg cagttcttcc acttcttccg ctgtgttacc aaaaataaag atattgtcag
      421 caccgacatg atccagcatc tcgacattcg caccgtccaa cgtaccgata gtcagcgcac
      481 cgttaagcgc aaacttcatg ttactggtgc cggaagcttc cgtccctgcc agcgaaatct
      541 gttcagacag atctgccgcc ggaatgatca actgcgccag gctaacgctg tagttcggga
      601 tgaacacgac tttcagctta tcgccaatct gcggatcgtt gttgatcact ttcgctacgt
      661 cattgatcaa atgaataatg tgcttcgcca tgtaataggc cgaagccgcc ttaccgccaa
      721 aaatattcac gcgcggtacc cacttcgcat ccgggtcggc cttgatgcgg ttatagcggg
      781 taatcacatg caacacattc atcaattgac gtttgtattc gtgaatacgt ttgatttgta
      841 catcgaacaa cgcctttgga ttcaccacca cattcagctg ctgggcgata tactctgcca
      901 gacgcttttt gttctccagc ttcgcctgat gcacagcgtg attaaccatt gggaaatcac
      961 agtgttgttg cagctcatta agcaggctaa ggtcggtgcg ccagttacgg cccaggtgtt
     1021 cgtccagcac ggctgaaagc gatgggttcg ctaccgctag ccagcgacgc ggcgtcacac
     1081 cgttggtgac gttggtgaaa cgacccggga agattttcgc aaagtcggca aacaacgatt
     1141 gcaccatcag attagagtgc agttccgata caccgttaac tttgtggctc acaacaaccg
     1201 ccagccaggc catacgcaca cgacgaccgt tggattcatc aatgatcgac gcccgtccca
     1261 gcagatcggt atcgttcgga tactgttcct gcaaggtttt caggaaatag tcgttgattt
     1321 caaagatgat ctgcaggtga cgcggcagaa ttttacccag catatcaacc ggccaggttt
     1381 ccagcgcctc gctcatcagc gtgtggttag tgtaggagaa gacctgacaa cacacctcaa
     1441 acgcgtcgtc ccagctaaat tggtgctcat cgatcagcag acgcatcatc tcaggaatcg
     1501 acagtaccgg atgggtatca ttgagatgaa tcgcgatttt atccgccagg ttatcgtagg
     1561 ttttatgcaa ctgataatgg cggcttaaaa tgtcctgaat ggtcgaggaa accagaaagt
     1621 attcctgacg caggcgcagc tcacgcccgg agtaggtgga gtcatccgga tacagtacgc
     1681 gagatacgtt ctcggagtgg tttttatctt ccactgccgc gaagtagtca ccttggttga
     1741 atttaccgag gttaatttcg ctactggctt gcgcactcca caaacgcaac gtgttggtcg
     1801 cgtcggtgtc gtaaccaggg attatctgat cgtaagcgac tcccagaatc tcttcggttt
     1861 caatccagcg cgttttttta ccttcctgct gaatgcgacc accaaaacgg actttatagc
     1921 gcgtgttgtg gcgtttgaat tcccacgggt taccgtattc cagccagtag tctggcgact
     1981 ctttctggct accgttaacg atgttctgct tgaacatacc gtagtcatag cggatgccgt
     2041 aaccgcgccc cggcaaccct aacgtcgcca gagaatcaag gaagcaagcc gccagacgtc
     2101 ccaggccacc gttaccgagg cctgggtcat tttcttcatc aatcagctct tcgagattta
     2161 accccatcgc ttccagtgcg ccctgtacat cttcgtaaat tcctagcgac aacatggcgt
     2221 tggagagcgt acggccaatc aaaaactcca tcgacaggta gtaaacctga cgagtttctt
     2281 gcgacaactg ggcacggttt gaacgtaacc agcgctccac gagacgatcg cgcacagcaa
     2341 ataacgttgc gttcagccat tcatgtttat tggcgacgac cgggtccttt ccaatcgtaa
     2401 acatcagctt gtaagcgata gagtgcttaa gagcttctac gctaagcgtg ggcgatgaat
     2461 atgtaaacgg agcattcata taggcgtttc ctgaaaacta tttcaagcga tagtaaagct
     2521 cacggtacga cttcgccgcg acctgccagc taaaatccat tgccatagcc tgacgttgca
     2581 caaaccgcca cagtgaagca cgagaccaca gtacaaaagc acgtcgaata gcccgtaaca
     2641 gcgaccaggc attactatct tcaaagacaa acccactggc gacgccatct gcaaggttct
     2701 caagagaaca gtcagaaacc gtatcagcaa gcccaccggt gcgccgcact aacggcagcg
     2761 taccgtactt caatccataa agttgcgtta agccgcacgg ttcaaaacgg ctgggcacca
     2821 gaatgacgtc cgcgccgccc ataatgcgat gcgaaaatgc ttcgtgatag ccaatctgaa
     2881 cgcccacctg gccggggtat tccgctgccg ccgcaaggaa accttcctgc agcaccggat
     2941 cgcccgcgcc gagtagcgcc agctgcccgc cctgctccag aagacccggt aaggcttcca
     3001 gcaccaggtc gagacctttc tggctggtca gacggctcac cactgcaaaa agcggcactt
     3061 tatcgtcaac cttaagcccc attgcgattt gtaactggcg cttattttcc gctttatctt
     3121 ccaacgtatc gcgggtgtaa cgcgaggcca acagtaagtc cgtctctgga ctccagattt
     3181 tctcgtccac gccgttcagt acgccggaaa gacgcccttc acggtgacgc tgttgcaaca
     3241 gaccttccat accgtaggca aactgcggtt cggtgatctc gcgagcgtag gttggactga
     3301 ccgccgtaat gtgatcggca tagtacagac cggccttcag gaaagagatt tgtccgttga
     3361 attccagccc atgaatatta aagaatgacc atggcaattg gatgtcattc atgtgatgtg
     3421 cataaaacat gccttgatag gccaagttgt gcacagtaaa caccgacttc gccggacgcc
     3481 cgcgcgccgc cagatacgca ggcgcaaggc ctgcatgcca gtcgtgcgca tgcaccacat
     3541 caggacgcca gaatgggtca agcccgctgg ccatttctgc cccaacccac cccagcagcg
     3601 caaaacgcaa tacgttgtcg gtataggcaa ataagttggt atcgtgatac gggcttcccg
     3661 gacgatcata gagatgcggc gcgtcaatca ggtatatgcc aaccccgttg taatgaccga
     3721 acaacagcgt gatatgtccg gcgaaggtat cacgacggga tactacctgc gcatcggtca
     3781 cgccacggcg aatatcggga aatgcaggca acagtacgcg agcgtcaacg ccgtctgcga
     3841 tttgtgctgc gggtaatgcc ccaataacat cagccagacc gccggtttta agcagcggga
     3901 acatctctga acatacatgt aaaacttgca ttatcgctcc tgtttatgcc ctaacttccg
     3961 tagcatttcg cgcgttacca gcacgatgcc ttcttctgaa cgatagaaac gacgtgcatc
     4021 ttcctctgcg ttttcaccaa tcaccatgcc ttccgggata acacaagcac gatcgatgac
     4081 gcagcggcgc agacggcacg agcgacctac ccatacttcc ggtaacaata cggcggaatc
     4141 aatgttgcag aatgaattca cgcgaacgcg cgagaacaga acggactgca ccaccaccga
     4201 accggagatc acacaaccgc cggataccag tgagttaagg gtcatcccgt ggctaccgga
     4261 gcgatcctgc acgaatttcg ctggcggtaa tgattcattg taggtgcgaa ttggccaatt
     4321 gcgatcgtac atatccagtt ccggcaccac agaggccaga tcgagattcg ctttccagta
     4381 agctttcagc gtacccacat cgcgccagta cggctcggca tccgggtcgg attgtacgca
     4441 agagagcggg aacgggtgcg cataggccag accggcttcg gtgatcttgg gaatcaaatc
     4501 tttgccaaag tcgtggctgg agttctcatc acgatcgtct tcttccagca gttcatacag
     4561 atagtcggcg tcaaagacgt agatacccat actcgccaga gatttgctcg gatcgttcgg
     4621 cattgacggt gggttagcag gtttttcaac gaattcgata attttatcgt tctcatcaac
     4681 cgccataacg ccaaatgcgg aggcttcttc aatcggtact ggcatacaag caacggtgca
     4741 acgtgcgcct ttttcgacgt gatcgataag catacgcgag tagtcttgct tgtagatatg
     4801 gtcgcccgcc aggatcacca cgtattccgc tttataacgg cggataatgt cgaggttttg
     4861 ggtgaccgca tctgcggtgc cgcgatacca gttttcccct ttcattctct gctgtgctgg
     4921 cagcagatcg acaaactcgt tcatttcttc attgaagaat gaccagccgc gctgaatgtg
     4981 ctgcaccaga gtgtgggact ggtactgggt gatcacgccc atacgacgga tcccggagtt
     5041 gatgcagtta gacagcgcaa agtcgataat gcggaactta ccgccgaagt gtacggccgg
     5101 ttttgctcgc ttattggtta aatccttcag gcgggtacca cgtcctcccg ccagtatcag
     5161 ggcaacagat ttcaatggca gctggcgcgc caacattaag tgatcgttct tctctaaact
     5221 aaccatgact aactcctttt ttatcatctc tggaacacac acaatccgtg tgcaggtccc
     5281 tgccagacag ccgtaatcac tgggttatcc tctccagcga atgggggaat ggcgtgccac
     5341 tccccagcag gtaaaacaat ctctgttacc tcaagcgtgg cgttaattgc gatcaaaaag
     5401 cgatccgaga gcagaatttg cagctgtttc ggcccgtttt gccactcatc cgtgcttaaa
     5461 ggttgagcat atcgatttag ccaacggaca ttgccatcgc cttcttccca ccagcgattc
     5521 tccaccaaag cgggaatgcg cttgcgcaga tggattaacg cggcggtaaa tgcggttaaa
     5581 ccactgcttg cctgcgacca gtccaaccag gttaattggt tatcctgaca gtaggcattg
     5641 ttattgccat gctggctgtg accatgttcg tcaccggcca gtaacatcgg cgtaccctgg
     5701 gagagcaaca acgttgttaa caaggcgtga atactgtcgc gccgccgttc aaccaggtca
     5761 agagaaccgc ctaacccttc tttaccatga ttgttactgt aattgttgtt ggtcccgtcg
     5821 cgattttctt ctccgtttgc ttcattgtgt ttatggttga agcaaacgca gtcgcgaagc
     5881 gtaaaaccgt catgcgcagt gacgagatta atcgcggcac tcggcagacg accattacgt
     5941 ttaaaaacat cgctggaggc agcaaaacgc ccggcaaacg cccccagagg caaatcataa
     6001 tgtagccaga aacgacgggc agcatcgcgg aaatgatcgt tccactcggc aaacagcggc
     6061 gggaaatttc ccacctgata accaccaggg gcgatatccc acggttcagc aattaacttc
     6121 acctgcgaga gcaccgggca gttctggata gcggtaaaca acggcgcatc ctgacggaac
     6181 tctggcgtac ggcccatgac tgccgccaga tcaaagcgga aaccatcgac gtgacaggtt
     6241 tctacccaat aacgcaggca ggcgctggca taatccacca ccgccggatg actcaaattg
     6301 agcgtgttgc cgcaaccggt ccagttgtga taatcgccgt cttctcttat ccaataatag
     6361 ctacggttat cgatcccacg cagtgagaat aacgggccgt cgaggtccag ttccgcacta
     6421 tggttgagca cgatatcaag aatgacttcg atacccgctt tatgcagtgc tttgattgca
     6481 tcgcgaaact catccagcgc cgtttctggc gagcaggcat acgccggatg cagcgcaaac
     6541 atcgccaccg ggttgtaacc ccagtagtta cttagcccca tgcgttgcag acgtggttca
     6601 ctggcaaact gcgccactgg cagcagttcc agcgcggtaa tgcccaattg tttcaaatag
     6661 ttgatcatca ccggatgccc gagggcttta taagtgccac ggatctcgac cggaatctcc
     6721 gggtgcaagt acgttaatcc tttgacatgg gcttcataaa tgatggtgct gccccacggc
     6781 gtgcgcggcg gggcatcatc ttcccagtca tagtgatcaa ccaccactac gcatttcggc
     6841 gcaatggcgg cgttgtcgcg atagtcaggt tcattatgac cggcgtgcag cagcgggtta
     6901 tctttaaatt ccccgtcaat ttgccgcgcg caaggatcaa tcaacaactt cgccgggtta
     6961 aagcgatgcc cctcggcggg ttgccagggg ccatgaacgc gataaccata acgcaaaccc
     7021 gggcgcgcat ccggcagata accgtgccaa atgtcgccac tgtgccctgg caagtcatag
     7081 cgatgttcct ggccattggc gtcaaagaca cacagttcta cccgctcggc atgagcggag
     7141 aaaagtgtga agttgacgcc ctgaccgtcg taatgcgcgc cgaggggagc gggtttgcca
     7201 atggcgagtt gtgtcattct gcctcccgaa ccagccagat agtggccagc ggtggtagtg
     7261 tcaggcttag tgaatgctga cgaccgtggc tggcaatctc atcgctgtgt accgtgccgc
     7321 cattgcctgc attactgccg tgatagtgca tggaatcggt attgaggatt tcacgccatt
     7381 tgcctggctg attaatgccg aagcgataat catgacgcgg caccggcgta aagttactgg
     7441 caacgataat ttcgttaccc tctttatcgc gacgcacaaa gatcagcacc gagcgttctt
     7501 tgtcatccac caccagccat tcaaagccgt acgggtcaaa atccagttca tgcattgctt
     7561 tatggtggcg gtaggtgagg ttcagatcgc gcaccagacg ctggacaccg tggtgccagt
     7621 tatcgccacc ttccaacaga tgccagtcga ggctggcgtc atggttccac tcacggccct
     7681 gggcaaattc gttccccatg aacagcagtt tcttgcccgg gaatgcccac atccagccat
     7741 agtaggcgcg caggttagcg aatttctgcc atgcgtcgcc cggcatgcgg tcgagaatcg
     7801 attttttacc gtggaccact tcatcatgcg acaacggcag gacgaagttt tcagtgtagt
     7861 tgtagagaat cccgaaggtg agtttatcgt gatgatactg acgataaacc gggtcgagct
     7921 tcatgtagtc cagggtgtca tgcatccagc cgaggttcca cttgtaccag aagcccagac
     7981 cgcccatatc ctgcggacga gaaacgccag ggaaatcggt agactcctca gccattgtca
     8041 ccgcaccgga aacctgctca ccaagaatac ggttggtatt acgcaagaat tcaatcgctt
     8101 caagattctc gcgcccgcca aattcgttcg ggatccactc cccctcttta cggctgtagt
     8161 cgcgataaat cattgacgcc accgcatcga cgcgcagcgc atcaatacca aaacgttcaa
     8221 tccagtaaag cgcgttaccg acgaggaagt tactgacttc acggcgacca taattgtaga
     8281 tcagcgtatt ccagtcctga tgatagcctt cgcgcggatc gctgtgttca tacaagttcg
     8341 tgccatcaaa ttcggcaagc gcaaagtcat cggtcgggaa gtggcctggc acccagtcga
     8401 gaatcacgtt cagacccgct gcgtgtgcgg catcaatgaa ataacggaag tcgtcgcgag
     8461 taccaaaacg gcgggttggt gcatacaggc cggttggctg ataaccccaa ctgccatcga
     8521 agggatgctc gttaatgggc agtagttcga ggtgggtaaa gcccatccat ttagcataag
     8581 gcaccagttg atcggccagc tcgcggtagc tcaaccagaa attgttatcg gtgtggcgac
     8641 gccaggagcc caggtgaact tcataaatag agattgacgc atcaaactga ttcgcttttt
     8701 tgcgctcttc agtctgtaca accttttccg gcagcccgca aataagagac gcggtttccg
     8761 ggcgcatttg cgcttcgaag gcataagggt cggacttcag acgcaagttg ccattggcat
     8821 caatcatctc gtatttatag agctgaccgt tatgcgcccc agggataaac agttcccaaa
     8881 tgccgctctc tttacgcaga cgcatcgggt gacggcgacc gtcccagtag ttgaattgcc
     8941 caaccaccga gacccgacgg gcgtttggag cccaaacaga gaaacgcgta cctgtgacgc
     9001 catccatagt atctgcatgc gcgcctaagg tttcatacgg gcgcaggtga gtaccttcag
     9061 ataatagcca ggcatccatt tcctggatta gcgggccaaa acggtaagga tcatcaatca
     9121 ggttttgctg accatgccag acaacagcca actgatagcg gaaaaaattc ttacgtcgcg
     9181 gaatgacacc gctaaagaat ccccgtgagt caagacactc cagttttgcg agtttgcgcc
     9241 cggttttcgg ttcaatcacc cacacatcgg tagcgtcggg taaaagggca cggacttcca
     9301 gtcccgcggt ggttttatgc attcccagta cggaaaaagg atccgcaaaa tggcctgcaa
     9361 ttagcgcgtt aatcacgtct ctatcgatac gatcggacat gcttgtcttc ctgttttatt
     9421 gtgtcacccc atccaattgg atttttgact tctggttgtg acattttttt gacctgaacg
     9481 gcgcagcact ctgtgcatcc tctctgcgtc gtcctcactt caggtaaggc tgtgaatact
     9541 catgtattca gccaccctta aagaatagcc aatgctctat ttaactcccg gtaaatcatg
     9601 aaacatctgc gcttactcct gtattacgca ctaacagggg cggcatcgcg ccccagattt
     9661 aatgaataaa gattacgcca gttgacgaag catccgacgc agcggctccg cggcccccca
     9721 cagcagctgg tcacccacgg taaaggctga caggaactcc ggtcccatat tcagcttacg
     9781 caggcggcct accggcgtgg tcagcgtgcc ggtaacggca gctggggtta gctcacgcat
     9841 agtgatttcc cgatcgttcg gaacgacttt cgcccacgga ttgtgcgcag ccagcagttc
     9901 ttcgacggtc ggaatagaca catctttttt caatttaata gtgaatgcct ggctgtggca
     9961 gcgcaatgcc ccgacacgca cacataaacc atctaccgga attacggaag atgtgttgag
    10021 gatcttgttg gtttccgcct gccctttcca ctcttcgcgg ctctgaccgt tatcgagctg
    10081 tttgtcgatc cacggaatca ggctacccgc cagcggcacg ccaaagttat ccaccggcag
    10141 ctcaccgcta cgggttaagg ttgtgacttt gcgttcgata tcgagaatag cagaggacgg
    10201 ggtcgcgagt tcatctgcca catggccata cagatggccc atctgggtta ataactcacg
    10261 catatgtcgc gcaccaccgc cggaagcggc ctggtaggtt gcaacggaca cccaatcaac
    10321 aagatcattg gcgaataaac cacccaacga catcaacatc aggcttacgg tacagttacc
    10381 gccaacaaaa gtcctgatgc cattatttaa tccgtcggta atgacgtcct gattgacggg
    10441 gtcaagaatg atgatggcgt catctttcat gcgcagagac gatgctgcgt caatccagta
    10501 accttgccat ccgctttcac gaagctttgg atagatttcg ttggtataat cgccgccctg
    10561 acaggtcaca atgatatcga gggcctttag cgcctccaga tcaaaggcat cctgaagtgt
    10621 gccagtggtt ccgccaaaag acggcgcagc ctggccaagc tgagaagtag aaaagaagac
    10681 agggcgaatg gcgtcgaagt cgcgctcttc aaccatgcgt tgcatgagaa cggagccgac
    10741 cataccgcgc cagccgataa aaccaacatt tttcataagc gttttttcct gcaaagatgt
    10801 gtgctgtata aatgtgccgg tctcctcttg gcacatcttt caccatacaa aaagcagcca
    10861 aagtcgcaag tgaaattaat caatgatagc gaagccatca gtaatgcgac ttatcctgct
    10921 ttgttagcac acagaaagtc cgcggcaatt atcagggaat ttgagttatg aatgaaatca
    10981 tttctgcagc agttttattg atcctgatta tggatccgct cggaaacctg cctattttca
    11041 tgtccgtact gaaacatact gaaccgaaaa gacggcgggc aatcatggtg cgagagttgc
    11101 ttattgctct cctggtgatg ctggtgttcc tgtttgcggg tgagaaaatt ctggcatttc
    11161 tcagcctgcg agcagaaacc gtctccattt ctggcggcat cattctgttt ctaatcgcca
    11221 ttaagatgat tttccccagc gcttcaggaa atagcagcgg gcttccggca ggtgaagagc
    11281 catttatcgt gccgttggca attccgttag tcgccgggcc gactattctc gccacgctga
    11341 tgttgttgtc tcatcagtac ccgaatcaga tgggacatct ggtgattgct ctgctgctgg
    11401 cctggggcgg cacctttgtc atcctgctac agtcttcgct atttttacgt ctgctgggcg
    11461 agaaaggggt gaacgcactt gaacgcctga tgggattgat tctggtgatg atggcaaccc
    11521 agatgttcct cgacggcatt cgaatgtgga tgaaggggta acgaggagag tttttcgaaa
    11581 agaacccggt agcgtcacaa ctaccgggcg aacaaactta actcaacagc tggaacgcaa
    11641 tcatcccaac gatggcacca acagtgccga ggatggtttc catcatggtc caggttttca
    11701 gcgtttcggc ttcggtcgcg ccggtaaatt taccgaacaa ccagaaaccg gcgtcgttaa
    11761 cgtggctgac aacaatcgaa ccaccagcga tacaaatcga cagtgccgcc atttgcgcac
    11821 cggagtagtt cagttgttca atgaccggca tcaccagccc caccgccgtt aaacaggcaa
    11881 cggtggcaga cccctgaatg atgcgcactg cagcggccag cacgaagcag gtgatagcaa
    11941 tcggcaggcc catgccggtt aacgcttcgc ccagtgccgg acctacgcca gagtcaacca
    12001 gcacctgttt gaacacgccg cctgcaccaa tcaccagcag aatgatcccc gccggttgta
    12061 gcgcgtgacc gcaaatctcc atcactttgt cttttggcat gccctgacgc attgccaggc
    12121 cataaatcgc taccagacaa gcaaccagaa tcgcggtaaa tggatgacca ataaactcga
    12181 accattcgta agcagttgat ccttctggca caaaacgagc ggcaatggtt ttcagcccca
    12241 ccagcaccag cggcaacagg atcagcgaca ggctgaatcc gaaggacggc attttgcctt
    12301 cgccgagatg cggttcgctg atgtcgtcag gaatatgcaa ctccacgtaa cggctgatga
    12361 aattacccca cagcggcccg gcaataatca ttcccggaat tgccgcacac agaccaatca
    12421 ggatcatcca gccaaagtcg gcattcatct gcgatgccag caacatcggc gctggtccag
    12481 gcaccagaaa tgccgccgct gccgccacgc ctgcgaataa tgggattacc agcttcacca
    12541 ggttcgtacc ggtgtggcgc gccattgaga aagcaacgct aatcagcaga actatcgcca
    12601 cttcaaagaa cagcggtagc gcacagacca accccgcaag gccgatggca taatgcgcgc
    12661 ggctgtgacc gaaggatttg agcattttga cggcaatctg atcgactgcg ccggtttcat
    12721 gtaagatctt gccaaacata gctcccaggg cgacaaccac cgccaggaag ccgagggggc
    12781 ctcccatccc tttttccatc gtcgctgcga ttttatcgag cggcataccg gaaaaaaggc
    12841 cagcccccat ggacaccacc atcaaagcca ggaaagcgtg catacgcgcc ttcatgacta
    12901 aaaacagcag cagtaaaaca gaccctactg ctgttaaaac aagcgttaat gtagtcacta
    12961 cttatttgcc ttttttaata acctcaatgg tgcttgccac aacaccttcc agcggttgat
    13021 cgatatccac caccagtaca tcggtttcgt ccgcacccgg ctcctgcagc gtttcaaact
    13081 gcgtcaccaa catttgggtt ttaaagaaat ggcctttgcg cgctttcaag cgactttcaa
    13141 tcacatcaaa atcgcctttc aggtagatga aagagagatt cggattacct tcacgcagca
    13201 agtcgcgata gtgctttttc agtgcagaac agacgatcag cgacacttta ttggtgcgca
    13261 gcatagcaaa cgcggcgtcg ttcagcgcct gcaaccaggg tttgcgatcg tcgtcattca
    13321 gcggttcgcc agacgccatt ttttcgatat tgcgccgtgg atggaggaaa tcaccatcaa
    13381 gaaacgcggc atgaagttga tgcgccactt cactggcgac cgcagatttg ccgctgcccg
    13441 atacgcccat caagacgtaa atgtggtgat catggttagt cgtgctcaaa gtggtgcccc
    13501 cacaatacaa gaattaaaaa tgttacgggt aactgttatc ggtaacattg tccagccgga
    13561 caatatcaga agcaatatcc atccgtgcct taagtgtata agtgtgagct acttcaaatt
    13621 tgtaggctta aatagatccg cccggtgaca aggtgaaacc taaatctaac attttcggtg
    13681 tcacagattc gccacgaata cgcgccagca ggcgttcagc gccaatactg cccatccgct
    13741 cacgcggcgt cagcacgctc gctaaccgcg gctccatcac ctggccaatg tcatgaccgt
    13801 ggaaaccggc aatcgccata tcgtcaggaa ccttcaatcc cagacgctga cattcaaacg
    13861 ccgcgccgac cgccaggtca tcgttggtac agaacacgcc atccagctgc ggatattccc
    13921 gccgcgcctg gcgaatcagt tcaataccgg aagagtaaga agaagattgc tcaaccatca
    13981 cgctatacga caccagacct gcatccagca tcgcctgttc gtatcccttc tgtttgatga
    14041 tagtacgttc gtcgagacgc gcgccgagat aggcaatgtg gcaatgcccg cgagcaataa
    14101 tggcggtggt catctggcgt gccgcttcaa agttatcaaa accgacggcg atatcgaggc
    14161 acggcgactg gctgtccatg agttccacca ccgggatccc cgccacttca atcatcttta
    14221 aggtgcgcgg cgtgtgggta cgttcggtga ggatcagtcc gtcgatattc catgagagca
    14281 tggattcgag acgttcttgc tccatttccg gtttataacc gtagtgagcc agcatggtct
    14341 gataaccgtg cgcgtcggtg acgctttcga ttccgcgtaa tacttccgcg aaaacctggt
    14401 tggtgagaga aggtaacagg acgccaatcg cccggctggt ggcgttagag aggatatcgg
    14461 gcgcacgatt gggaatatag cccagttcat caagagcggc ggcaatcttg ccgcgtagag
    14521 cgacggaaac ctgctccggg ttgcgtaaaa aacggctgac cgtcattttg gtcacgccta
    14581 cacggtcagc cacatcctga agtacgggtc ttttcttttt catcgtcctg aaggtacaaa
    14641 agagatagat tctcttagtt taacacggac gcatcagaac cttcccgggg aaaacagtgc
    14701 ttgtttacaa ttattagata tacactaaat caattgcatc gcattgtgct aacgacgcgg
    14761 caaaaccccg gaagcgtgca tcagcacgcg accggagcga gcgaggaagc ctgcaaaaag
    14821 gcaggcttca aagatgccgt tgagttttaa accggcggca gatcgaacag taacacttcg
    14881 ctgtcgctat ccgcatggat ggagattgcc tgctcatccc agattgccag accatcgctg
    14941 gtcgaggctt tcacgccgtt aatggtgaca ttgcctttca ccacctggat ccagacgcgg
    15001 cgttcagcgg caatctgatg caccgactgc tcatctttca gcaacgccca gcggtacagt
    15061 tccatatcct gatgcacttt caatgaacca tctcgcgcat ccggcgagag caccagctgt
    15121 ttgccctgta cggcatcgaa gcgacgctgt tcataacgcg gcgtaatacc gttttcttca
    15181 ggcatgatcc agatctgata cagatgcaga cgctcggtgc tgcttgggtt gtactctgag
    15241 tgacgaatac ccgtacccgc actcataatc tggaactcac ccgccggaac ctgctcttta
    15301 ttgcccatgc tgtcctgatg ctcaacagta ccttccagca cgtaggtcaa aatttccata
    15361 tctttatgcg ggtgagtgcc gaagccctgc cctgcttcaa tcacgtcgtc gttaatcacg
    15421 cgcagcgcgg agaagcccat aaagttcgga tcgtaatagt tggcaaaaga gaaagtatgc
    15481 caggagtcca gccagccatg atttgcatga ccacgttcat ttgctttgcg taagtagatc
    15541 atttgtattc gccccctgaa tgatttcgat gggcttagtg tggacccgat ctgcctggga
    15601 tgatagaggg tgaaaattgc cccctctgtt caaaaaaatt gaactattcg aggggccatc
    15661 aaacttaatt cgcgagagtc actgtggagg gagaggcttg ctcaaatccg cgttcaagga
    15721 tttccagatt ggtaagaact tcagattcct tgacgtaatt tggcgcaccg tgggtgatgg
    15781 tttgatacaa cgcatcataa acgcgcccgt aatcgcccat ctccggcttc atctcttctc
    15841 tgaccgtcac gccctcgtca ttgacatact ccggcacacc gaccgaatca tccgctgcga
    15901 atcccggttc gcccggcata atattagcct tcaggctggt ttcctgctgg tcgataccgt
    15961 atttaataaa cgaacctttc ttaccgtgaa cgataaattt cggataatcg attttcacca
    16021 gatggctggt tttgacgatg gctttcaggt cgccataaaa cagttgcgct tcaaaggtgt
    16081 cgtcaggatt ggctttatta cgcaggctgc ggatgtcata agcgacgtga tccgggcgac
    16141 cgaacagaga aataatctgg tccatcgtat gcacaccaag gccataaaac gcgccatcct
    16201 gcggcagccc aggtttggtt tctgccaccg ggcggtaata gtcaaaatgg ctttccactt
    16261 caacaatctc tcccaacttg ccactttcaa tcgctttttt cgctgtcagg aagcaggagt
    16321 caaagcgacg attctgatac ggcgtgacgc tcagcccttt gcttttcgcc aacgcaaaca
    16381 gctccttcgc ctgggcaagc gtcggggtga acggtttttc gaccagcaca tttttcccgg
    16441 cttccagcgc gcgtttcgcg tactcgaaat ggctgtccgc gtgggtgcag acaacaacca
    16501 gcttaacatc gggatcgttt agtacttcgt cgagatcgct gatgaaatgg atatgggaat
    16561 aaatgggagc ctgttcttcc ggcttcgcat ggcgacgaaa aatatgcgcg acatgccagc
    16621 tatccttgcg gttaagtaca tacggcagat ggtaacgggt ggtgcttttg ccgaagccaa
    16681 taaaggcgca gttgatgacc atgatttcgt cctttttaag gtggttattt acaccttaac
    16741 gcaaagcgga cgtggttcct actggagtgc gcataacgaa cacaagcact cccgtggata
    16801 aattgagaac gaaagatcaa aaaaaagcca gcacccggct ggctaagtaa tactggaagc
    16861 aatgtgagca atgtcgtgct ttcaggttct ccgcgagggt cttcctgatc gcgagacaat
    16921 aataatcatt ctcattcgcg cttgtccaac actttttgca aaaaaatgca tttgactcgc
    16981 atttgaaagt caatgatgtt gaaagggaca tttaccccaa agaggacaaa ggaatgagtg
    17041 agatagtaat acgccacgca gaaacacggg attacgaggc catcaggcag attcacgccc
    17101 agccggaggt gtattgcaac acactacagg tgcctcatcc ttccgatcat atgtggcagg
    17161 agcgactcgc cgatcgtccc ggcatcaagc aactcgtcgc ctgtattgat ggagacgtcg
    17221 tgggccatct caccattgac gtgcaacagc gcccacgcag cagtcatgtt gccgattttg
    17281 gtatctgtgt cgactctcgt tggaagaacc gcggcgtcgc cagcgccctg atgcgagaga
    17341 tgattgaaat gtgcgacaac tggttgcggg tagatcgcat tgaactaacc gtgtttgtcg
    17401 ataacgcccc ggcaattaag gtctataaaa aatacggctt tgaaattgaa gggactggta
    17461 agaagtacgc attgcgtaat ggtgaatatg tcgatgcata ttatatggcg cgggtgaagt
    17521 aagatagtgc cctttttctg agatggaaaa agggtgtcat tcaaaatcga cataccttcc
    17581 tttaaggtat ttatttaccc aatacatata ttgagattta actcataatt aattcctaaa
    17641 gtgtaatatt ttatttttta atatatacgc ctacaatttc ctggagtaaa taaataacaa
    17701 ttaacaagca taatattgcc attgataaaa tagcatgcca taaaaggact tttcagggat
    17761 gagtaatatt gtttacctga cagtaacggg agaacaacaa ggaagcatct ccgcaggttg
    17821 tgggacttct gagtctacag gtaatcgttg gcagagcggg catgaggatg aaatatttac
    17881 attctcactc ttaaataata ttaataatac ggggcttggt tcacagttcc atggtataac
    17941 attttgtaaa ttaattgata aaagcactcc attatttatt aattccatta acaataatga
    18001 acaattattt atgggatttg acttctatcg aataaataga tttggtagat tggaaaagta
    18061 ttattatata caactaagag gcgctttttt atcggctatt catcaccaga tcattgaaaa
    18121 ccaactggat acagaaacaa taactattag ttatgaattt atcctctgtc aacatcttat
    18181 cgcaaatacc gagttcagct atttggcact ccctgaaaat tataaccgat tgtttttacc
    18241 aaattcaaaa aaccaaacaa ataatcgttt caaaacgtta aacagcaaag ctattggcag
    18301 gctacttgct gctggtggcg tatacaatgg gaacattgaa ggattcagag atactgcgga
    18361 aaaactgggt ggagatgcaa taaaaggcta tgatcaaata ctaaatgaaa aaacagcggg
    18421 catagcgata gcaacagcat ctattctttt aacaaagcgt tctaatgttg atacatatac
    18481 agaaataaat agttacttag gcaaacttag aggtcaacaa aaacttcttg atggtataga
    18541 cataatagaa ataatataca ttaagagacc ttcaaaagac ttagctaact tacgaaagga
    18601 gtttaataaa actgtaagaa aaattttctt atcaaacttt caaaaacctc cgaagcatct
    18661 ggaagattca acgccgaaga ccttttaaga atgagaaagg gcaatgttcc tctaaattat
    18721 aatgttcacc ataaactatc tctagatgat ggtggtacta atgatttcga aaatttagta
    18781 ttaatcgaaa acgaaccata tcataaagtt tttactaaca tgcaatcacg aatagctaag
    18841 ggaatattag taggtgaaag caaaatcact ccctgggcca ttccatctgg ctcaatttat
    18901 cctcccatga aaaatgtaat gaacgcatc
//
LOCUS       DADKRT010000077        18876 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.078, whole genome shotgun sequence.
ACCESSION   DADKRT010000077 DADKRT010000000
VERSION     DADKRT010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18876
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.078"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(151..699)
                     /gene="pgsA"
                     /locus_tag="JQ356_002207"
     CDS             complement(151..699)
                     /gene="pgsA"
                     /locus_tag="JQ356_002207"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HAY4622288.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARADLLDQ"
     gene            complement(756..2588)
                     /gene="uvrC"
                     /locus_tag="JQ356_002208"
     CDS             complement(756..2588)
                     /gene="uvrC"
                     /locus_tag="JQ356_002208"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310678.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HAY4622289.1"
                     /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS
                     QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEV
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY
                     GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET
                     LFFEPEDEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            complement(2585..3241)
                     /gene="uvrY"
                     /locus_tag="JQ356_002209"
     CDS             complement(2585..3241)
                     /gene="uvrY"
                     /locus_tag="JQ356_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HAY4622290.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
                     TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
                     "
     gene            3536..3712
                     /locus_tag="JQ356_002210"
     CDS             3536..3712
                     /locus_tag="JQ356_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622291.1"
                     /translation="MIKIFIGHYINVFYSTADITLKKQPLLFLAKLMVYSAALTFFTA
                     NFHCNMTRKINEYA"
     gene            3699..3923
                     /locus_tag="JQ356_002211"
     CDS             3699..3923
                     /locus_tag="JQ356_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HAY4622292.1"
                     /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
                     MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
     gene            complement(3990..4712)
                     /gene="sdiA"
                     /locus_tag="JQ356_002212"
     CDS             complement(3990..4712)
                     /gene="sdiA"
                     /locus_tag="JQ356_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
                     /protein_id="HAY4622293.1"
                     /translation="MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSL
                     CVRHPVPFTRPKVAFYTNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE
                     AQPLWEAAHAHGLRRGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRE
                     SLMALMRLNDEIVMTPEMNFSKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNM
                     QKKINAPNKTQVACYAAATGLI"
     gene            complement(4942..5694)
                     /gene="yecC"
                     /locus_tag="JQ356_002213"
     CDS             complement(4942..5694)
                     /gene="yecC"
                     /locus_tag="JQ356_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HAY4622294.1"
                     /translation="MSAIEVKNLVKKFQGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
                     LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
                     LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
                     MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
                     LGRIVEQGAAKALFADPQQPRTRQFLEKFLLQ"
     gene            complement(5691..6359)
                     /gene="tcyL"
                     /locus_tag="JQ356_002214"
     CDS             complement(5691..6359)
                     /gene="tcyL"
                     /locus_tag="JQ356_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
                     /protein_id="HAY4622295.1"
                     /translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR
                     LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPILSAMIGLSLNTAAY
                     AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
                     SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE
                     REPK"
     gene            complement(6374..7360)
                     /gene="dcyD"
                     /locus_tag="JQ356_002215"
     CDS             complement(6374..7360)
                     /gene="dcyD"
                     /locus_tag="JQ356_002215"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HAY4622296.1"
                     /translation="MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTP
                     MAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP
                     IGTTAENYLTNGNRLLLNLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
                     SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGV
                     TVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLA
                     RLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV"
     gene            complement(7465..8265)
                     /gene="tcyJ"
                     /locus_tag="JQ356_002216"
     CDS             complement(7465..8265)
                     /gene="tcyJ"
                     /locus_tag="JQ356_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4622297.1"
                     /translation="MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLL
                     VGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRID
                     VVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNY
                     EEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEA
                     FSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK"
     gene            complement(8353..8904)
                     /gene="fliZ"
                     /locus_tag="JQ356_002217"
     CDS             complement(8353..8904)
                     /gene="fliZ"
                     /locus_tag="JQ356_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310687.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliZ"
                     /protein_id="HAY4622298.1"
                     /translation="MMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIV
                     NKIEISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEM
                     SPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQ
                     HYQRQTCTGLVQKSSSLPASDIY"
     gene            complement(8950..9669)
                     /locus_tag="JQ356_002218"
     CDS             complement(8950..9669)
                     /locus_tag="JQ356_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HAY4622299.1"
                     /translation="MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDL
                     LQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQ
                     AIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELV
                     TDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGE
                     SRVSQLHSQAIKRLSTKLGKL"
     gene            complement(9989..11695)
                     /locus_tag="JQ356_002219"
     CDS             complement(9989..11695)
                     /locus_tag="JQ356_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="HAY4622300.1"
                     /translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD
                     AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRILELTVQASTG
                     TNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
                     KKIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALS
                     RLKTGDTVTTTGSSAAIYTYDAAKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYT
                     RSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTG
                     SIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSA
                     TASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKF
                     AATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSIDKFRSSLGAIQNRLDSA
                     VTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLL
                     QG"
     gene            11961..13367
                     /gene="fliD"
                     /locus_tag="JQ356_002220"
     CDS             11961..13367
                     /gene="fliD"
                     /locus_tag="JQ356_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HAY4622301.1"
                     /translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL
                     SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL
                     AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
                     KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV
                     SVAAKNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK
                     DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS
                     SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS
                     NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKKQFTQLDVLMTSL
                     NSTSSYLTQQFENNSNSK"
     gene            13392..13802
                     /gene="fliS"
                     /locus_tag="JQ356_002221"
     CDS             13392..13802
                     /gene="fliS"
                     /locus_tag="JQ356_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HAY4622302.1"
                     /translation="MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARL
                     FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR
                     NDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV"
     gene            13802..14168
                     /gene="fliT"
                     /locus_tag="JQ356_002222"
                     /pseudo
     CDS             13802..14168
                     /gene="fliT"
                     /locus_tag="JQ356_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001015018.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliT"
     gene            14246..15733
                     /gene="amyA"
                     /locus_tag="JQ356_002223"
     CDS             14246..15733
                     /gene="amyA"
                     /locus_tag="JQ356_002223"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY4622303.1"
                     /translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA
                     YKGASGGYSVGYDSYNLFDLGEFDQKGSIPTKYGDKVQLLAAIDALKRNDIAVLLDVV
                     VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCF
                     SGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
                     WARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQT
                     YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ
                     PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII
                     EQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEYPGCVVVMSNGDDGEKTIHLG
                     ENYGNKTWRDFLGNRQESVITDEHGEATFFCNGGSVSVWVIEEVI"
     gene            complement(15767..16180)
                     /locus_tag="JQ356_002224"
     CDS             complement(15767..16180)
                     /locus_tag="JQ356_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY4622304.1"
                     /translation="MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ
                     RALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLALMSDDLTNVTVKRELYEVERD
                     GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP"
     gene            16367..17572
                     /gene="yedE"
                     /locus_tag="JQ356_002225"
     CDS             16367..17572
                     /gene="yedE"
                     /locus_tag="JQ356_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HAY4622305.1"
                     /translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE
                     FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK
                     LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW
                     FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ
                     PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV
                     QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
                     TILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFTALMLIIGWEKRFFRRA
                     APQTAKEIA"
     gene            17569..17802
                     /gene="yedF"
                     /locus_tag="JQ356_002226"
     CDS             17569..17802
                     /gene="yedF"
                     /locus_tag="JQ356_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HAY4622306.1"
                     /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
                     QSINNIPLDARNHGYTVRDIQQDGPTIRYLIQK"
     gene            17909..18580
                     /locus_tag="JQ356_002227"
     CDS             17909..18580
                     /locus_tag="JQ356_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HAY4622307.1"
                     /translation="MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKV
                     LLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADG
                     WFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFEHGDEAEGFLIVTAAADQGLVDIH
                     DRRPLVLSPEAAQEWMRQEIGGKEASEIATNGCVPANQFTWHPVSRAVGNVKNQGAEL
                     IQPVC"
     gene            complement(18620..>18876)
                     /locus_tag="JQ356_002228"
     CDS             complement(18620..>18876)
                     /locus_tag="JQ356_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4622308.1"
                     /translation="GGQVFAVPPACTSQRCACCGHTAKENRLSQSKFRCQVCGYTANA
                     DVNGARNILAAGHAVLACGEMVQSGRPLKQEPTEMIQATA"
BASE COUNT         4667 a         4890 c         4612 g         4707 t
ORIGIN      
        1 ttcattaagc aatcagttaa tcacttgatt ttattatcgt ctggcaatca gtgccgccgt
       61 tcgatgcgtt gcattctact tacctggcgc gatgagtcaa cgatattttt caccactttt
      121 gatcgtttgc tgaaaattac gccgaaacga tcactgatca agcaaatctg cacgcgcagc
      181 gctcaaatat tgcaacattg accacagagt cagcaccgca gccacaaaga aaagtgcaat
      241 accggcgtac tcaacccaaa tgttcggacg ccacagcagc caggccaacg ccaccatctg
      301 ggcagtggtt ttcactttcc caatccagga gacagccacg ctactgcgtt tacccaactc
      361 cgccatccat tcgcgtagcg cagaaataat aatttcacgg gcgatcatcg ttgccgccgg
      421 tagggtcacc caccagctgt gataatgctc ggttaccagc accatggcga tagccacgag
      481 aactttatct gctacagggt caaggaaagc accaaaccga gtactctggt tccagcggcg
      541 tgccagaaaa ccatcgaacc agtcagtcac cgccgcgacg cagaaaatga gcgcggcggc
      601 aaacggcgac caggtgacag gcagataaaa gaccaataca aagaatggga taaggatgac
      661 acggaacagt gtaagcaacg tagggatatt aaattgcata atgacgggta actatctgtt
      721 gtcagtaaga ttacccctat gttgctacag agacatcaat gtttcaacga ccagaagatc
      781 ttttctgcca gaccttgcga aatacccggc acttttgcaa tttcctcgac gctggcgtta
      841 cgtaaacctt gcaaaccgcc catatatttc aacaacattt gccgacgttt tggcccgacg
      901 ccttcaatgg tttccaggga actggtattt ttgaccttcg cccgtttttt acggtgcccg
      961 ccaatcgcgt gatcatgtga ttcatcgcga atatgctgga taacatgcag cgcgggtgaa
     1021 tctggcggca aactaaatcc ctcatcttcc ggctcaaaga acagcgtttc cagtccagcc
     1081 ttacgatctg ctcctttggc aacgccaagt agcagcggat gatttttatc ccatgagaca
     1141 tccagttcgg cgaagacatt tttcgcctgc gcaagctggc ctttgccgcc gtcgataagg
     1201 atcacatccg ggatcttact gtcgtcaatg gctttaccat aacgccgacg cagcacctga
     1261 ttcatcgccg cataatcatc gcccggcgtg atgcctgtaa tgttatagcg ccgatactcc
     1321 gcacgcagcg ggccgttagc atcaaacacc acacaggaag cgacggtttg ttcgcccatg
     1381 gtatggctga tgtcaaagca ctccatccgc ttcacttccg gcaatttcaa cacgctggca
     1441 agcgcggtca gtcgctggtg aacggtagat tgctgcgaaa gtttgctggt taaggccgtc
     1501 gccgcattgg tgcgcgcgag tttcagataa cgcgccctat cgccgcgagg tttggtttga
     1561 acattaatct tgcgtcccgc cagttctgaa agggaatcgg cgagcagcgt tttatcgcta
     1621 agattaaaat cgagcaggat ctcacccggt aaggtgcgca tctggctgcc ttgtaaatag
     1681 aactgaccta cgaaggtttc taccacctcg ctcagttccg taccgccagg cactttcggg
     1741 aaatagctgc ggctgccgag cactttgccc tgacgaatga acaatacgtg gacacaagcc
     1801 atgcccgcat cgaacgccac accaataacg tcaaggtcgt cgccggtatt ggaaacaaac
     1861 tgtttttcgg tgacgcgtcg caccgcctga atttggtcgc gaatacgtgc cgcttcttca
     1921 aactccagat tctgactggc agtttccata cggctaatga gttgcgtaag cacctgatca
     1981 tctttgccag acaaaaacag gcgcacatac tcgacctgct gagcgtattc ttcttcactc
     2041 accagtcctt caacgcacgg tcccagacag cgccctatct gatattgcag acacggacgc
     2101 gagcgattgc gataaacact attttcgcac tggcgaatgg ggaaaatctt ttgcagtagc
     2161 gccagagttt cacgtacggc atagccattc gggaacgggc cgaaatattc acctttggca
     2221 tgcttcgcac cacgatgcat cgccagacgc gggtgggtat cgccactcag gaagataaaa
     2281 ggataagatt tatcatcgcg tagcaaaacg ttgtaacgcg gctgatagag tttgatgtag
     2341 ttgtgttcca gcaacagcgc ttcggtttct gtatgagtaa ccgttacatc aatttgctga
     2401 atctgggcga ccagcgcttc ggttttgcgc gaagcgaggt tgctacggaa atagctggaa
     2461 agccgttttt tcaggtcttt cgctttgccg acatagataa ccgtaccacc agcatcgtac
     2521 atgcgataaa cgcctggctg gctggttacg gtttttaaaa acgcttttgc gtcaaactga
     2581 tcactcactg acttgataat gtctccgcat tacacagacc atggcgaatt gccaggtgag
     2641 tcagctcaac atcgccatga atgtttagtt tactgaacat acgatagcgg tagctgttca
     2701 ccgttttcgg actgagattg agctgttctg agatctcatt gaccttctgg cccttggtga
     2761 tcatcagcat aatctgcaat tcacgttcag acaaactggc aaatgggctt tctgtttttt
     2821 ctggttcgat ctggcttaac gccatttgtt gagcgatgtc agaagcaatg taacgctgcc
     2881 ctgaatagac agaacgaatc gcactcacga cttcctgcgg agccgcgcct ttgctgaggt
     2941 agcccgcagc accggcctgc atgactttcg ctggtaaagg gttttctgta tgaacggtaa
     3001 gcatgatgat tttgacatca gctgtggaac gcgcgatttt acgcgtcgcc tcaagaccgc
     3061 caatgcccgg catactcatg tccattagca ccacgtcaac ggcatttgtc cggcaccact
     3121 taacggcgtc ttcaccgcac gatgcctcac cgacgacttt tatacccttt atatcttcca
     3181 gaatgcgtcg tatccctgcg cgcaccagtt cgtggtcatc aacaagtaga acgttgatca
     3241 aagaaatatc tccagaaata gggataacgc tactgatagt tagtcattcg tatattagcg
     3301 gtttttattg caactttgaa acgttaaaaa tggtgggtat tcgatttttc tctcgttttt
     3361 gtcaattcga ttgtccacag ttatggtcac gcccgtcacc aacggcttac cggatcgttt
     3421 cacagtaagc cctacgatga aatgtgacaa aaattgactt tattcagcaa aaatgaaaat
     3481 cagcccgctg aatatgtaac attaattaac ccgaacaata cgggcaaaaa cattcatgat
     3541 aaaaatattt attggtcatt atattaacgt attttatagc actgccgata tcacgctcaa
     3601 aaaacaacca ctgctatttt tagcaaagct tatggtatac tccgccgcct taacattttt
     3661 caccgcaaat tttcattgca acatgacgag gaaaataaat gagtacgcct gatttttcta
     3721 ctgccgagaa taatcaagaa ctggcaaatg aagtctcctg cctgaaagcg atgctgacgc
     3781 tgatgctgca ggcgatggga caagctgacg cgggccgcgt gatgttaaag atggaaaaac
     3841 agcttgcgct gatcgaagac gaaacccagg ctgcagtatt ttccaaaacg gttaagcaaa
     3901 ttaaacaagc ctaccgtcag taatataaaa ccggctgaga gcgtgccttt cagccggttt
     3961 ttgcatctgg cacgcagaaa gaaaagcgat caaattaagc cagtagcggc cgcgtaacag
     4021 gccacctggg tcttatttgg tgcattgatt tttttctgca tgtttttctg atggaaattg
     4081 accgtattct cagagattga caaaatcatc gctatctctg ctgatgtctt cccttccgcc
     4141 gtccatttca gaatttcttt ttcgcgcttg ctgaaattca tctctggcgt catcactatt
     4201 tcatcattta aacgcatcag agccatcaga ctttcgcgca ccagtaactg catttttaat
     4261 tgcagttcat cactaagaat gggtatttcg cgcgtgctgc aacgggaaaa ggacaaaaag
     4321 cccagcgccc gatttggcag cattaaatac tgagtgacac cgcggcgtaa accatgtgcg
     4381 tgcgcggctt cccataatgg ctgtgcttcg ctgaataagt catcattcca cattaaatgg
     4441 ccctgactaa agttttcagg gttcagcaca ggatcaattg cgagaaaatt ttttgcctga
     4501 taataactaa cccacgactc agggtaattg gtgtagaaag ccactttagg tcgcgtgaat
     4561 ggtaccgggt ggcgaacaca taacgaatag taatcgtact ccagctgctg agcctgaagc
     4621 tctatttcat ggtagacctc ttctgcggcc tccatcctct gaaaacgcaa cagcatcgtg
     4681 cgacgccaac tgaaaaaatc cgtatcctgc atagtaaacc gcaacgcccc tgagagtgag
     4741 tatcatttat aatgataatt caaactatca cataaataag atttatatat aatttatatt
     4801 attcaggcaa tgaattactt ttgcaagcca tcgcattctc ttatgttatt aatgagttat
     4861 gctgatttgt taagcagttt tatcacgctt gaaatggcgt cccgccccga caggtgaatc
     4921 gtcggggctg attttttctt attattgcag cagaaacttc tcgaggaact gtcgggtgcg
     4981 aggctgctgg ggatcggcaa ataacgcttt tgctgccccc tgctcgacta tccgccccag
     5041 gtccataaaa atcgcccggt ccgcaacatc ccgggcaaag ctcatttcgt gcgtcacaat
     5101 caccatcgtg cgcttttcct gcgccagctg gcggattgtg ttcaggactt cgcccaccag
     5161 ctctggatcc agcgctgacg ttggctcgtc aaacaaaatc acctcaggac gcattgccag
     5221 cgcacgcgca atcgctacac gctgctgttg accgccagac aaacgacgtg gatagctggt
     5281 ttctttaccg gccagcccaa ctttcgccag cagctcgcga gcgcgcgccg tggcctcttc
     5341 tttcggttcg cctttgacga tcaccggccc ttcaataatg ttttccagca ccgtacgatg
     5401 cggaaacaaa ttaaagttct ggaagacaaa cccgacgtgc tgacgcaact ggcgaatcag
     5461 cgatttttgc tgacttaatg aacgtgcagt atcaatagtg atatcgccaa cggtgatcgt
     5521 tcccgcttcc ggttgttcca gcagatttat gctgcgtagc aacgtggttt tgccggaacc
     5581 actcggaccg ataattgcca ccacttcgcc aggctttacc tcgaggtcga taccgtgcag
     5641 caccgtctga ccttggaatt ttttcaccag gttcttaact tcaatggcac tcatttgggt
     5701 tctctctcct ggcgattaag ttgattctca aaatggttct gcaacgtcga taacacagtc
     5761 gccatgatcc agtagatgag cgaagccgcc aggtacatgg tgaacacctc cagcgtgcgc
     5821 gaggtaatca actgcgcctg acggaacagc tccggcacct ggattgtcgc ggccagcgac
     5881 gtatctttta ccagactgat aaagctgttc gacagcggcg gcaacgccac ccgcgccgcc
     5941 tgtggcaaaa tcgcgcgacg catggtctgc cacggcgtca taccaatact ggcagcggct
     6001 tcccactgac ctttatcaat agaagaaatg gcggcgcgca gcgtttcggc ggcataggcg
     6061 gcagtgttca gcgacagacc aatcattgct gacagaatgg gatctaattc gataccaaac
     6121 tgcggcaggc cgtaatagat cataaacagt tgtgcgatga gcggcgtacc acgaaaaata
     6181 gagatataaa aacgcgccag ccagcgcacg ggccagattg gcgacaggcg catcagcgcg
     6241 agaataaacc cgagtagtaa gccaaaaaac atgccgccga tactgagttg cagggtatac
     6301 ccagcccctt tcaacaggaa cggcaaggaa tcaataacca gttgtatact ttcttgcatg
     6361 agcgttcccg gagctaaacg tggggatgat aggcgaacag cgcaggcgcg ccgccggtat
     6421 gaataaacag aatcggccct tcatctttga agcgtttctg actgataccg tcaatcagcc
     6481 ccgccatcgc ttttccggta tacacaggat caagcagaat gccttccaga cgcgccagca
     6541 atttcactgc ttccatgcct tcgtcgttcg gcacgccgta gccaggtgca aaatagtcat
     6601 cccagagtaa aatttccgct gatgcggtca gctccagttc tttcgcaatc gcctgttgta
     6661 ggttaaccac tttcggcaat tgatcggcaa cggaacgcga cacggtcacg ccaatcagtt
     6721 cgctttcagg catcaggtgt tccagcccaa cagccaatcc ggcgtgagtt ccggcactgc
     6781 ccgatgcgac caccaccgac gaaatattaa ccgccccttc acactgttgc gcgatttcca
     6841 gcgcactctc cacataaccc agcgcgccca gagcattaga accgccaacc ggaatgacat
     6901 acgggcgaaa gccttgtgct tcgactcgcg tcgccagctc ttccagttgg gcattgggat
     6961 cggtcagtgc gtcgcacatt tcaatctggg tattgaacag attcagcaac aaacgattgc
     7021 cgttggttaa atagttttct gcggttgtgc caataggatt ttccagcagc gccacgcagt
     7081 gcaggccgag tttcgccgca actgcggcag tctgccgcac atggttagac tggatcgcgc
     7141 cggcagtaat cagcgtatcg gcaccttcgc gcagggcatc tgccgcgaga aattccagct
     7201 tacgtaattt attgccgccc attgccatgg gtgtgacgtc atcccgtttg atgaaaattt
     7261 cccgtccaag ataatcagaa aagcgcggca gatattcgag cggcgttggc gcgccgataa
     7321 actccagccg tggaaaacgg gttaaattat gcagtggcat aatagcctcc gatgtgtgtt
     7381 gttgtgattt tcttattatg cacgctgaaa acgcgtaaat aaaaaaggcg ctagtgaaag
     7441 cgcccttttt tgtcattatg ctgattattt ggtcacatca gcaccaaacc atttttcgga
     7501 aagggcttgc agagtgccat ctttttgcat ttccgcaatt gcatcgttca ctgctttcag
     7561 caggtcttca tttcctttac gcagcgccac gccagactcc tgacgggaga atgcttcacc
     7621 ggttactgcc agcgtatcgt tggttttctt caccagatcc agcgccgcca gacggtcaac
     7681 gaggatcgca tcgatacggc ctacgcgcag atcctgatat ttggtcgggt catcatcata
     7741 ggtacgcaca tcgacgccct gaacattctg ccgcagccac tcttcatagt tggtgcccag
     7801 accgacaccc acttttttgc ctttcagatc agcagccgtt ttaatggtgc cttcgttacc
     7861 ttttttcacc agcgcctgaa taccagaaat ggtgtacggg gtagagaaat cgtatttttt
     7921 cttgcgctca tcagaaatgg tgacctgatt aatcaccaca tcaatacgtt tagagtccag
     7981 cgacgctagc ataccgtccc atttggtcgg ttttagtgac gcctcaacgc caagatgttt
     8041 tgccagctgt tgggcaaatt ccacttcaaa accggttaat ttgccgtcat ccccctgaaa
     8101 actgaacggc ggataagttc cttccagccc taccagtagc gtaccgcgct ctttgacttt
     8161 attaagcaga ccttcatctg caaaactttt aacgctcatg cccgcaacca gcgccacggc
     8221 catcacaccc atcaatgcct gacgtcccag atgtgctaat ttcatattca ccccgaatgt
     8281 tgttatgtct gtttgcagtg tagagccatt gtttgtaaac acaaaaacaa ctccgctaca
     8341 tcttattctt atttaatata tatcagaagc aggcaggctg gaggatttct gcacaagtcc
     8401 ggtacacgtt tgacgctgat agtgttgata cttccgtaat gcgatgcggt aattgttggt
     8461 gctggtggtg ggcagccacg gggcgaggat ttcatcaagg aaaccgtcct gcagctgatc
     8521 gagggaaata ttttgctcat gtagatgatt ccccaaacgg cgcaaacgaa cgacatattc
     8581 acgcaccgta cctgggctca tttcagtttg ctcaaaaaga aattgcttaa agccgataat
     8641 atcgaaaaaa tcactctgcg ttttgcaatg taaatcaccg caaaatcggc acaatgccgc
     8701 ccatgactgt tgttccactt gccagccatt ttcatcaagc agcgtgtcca ggcgggaaat
     8761 ctcgatttta ttcactattt tgccgtcgcg aactaaggta atgcgatcga gtaatttacg
     8821 gcaatgcgcg caatgggcct ggctgtgttt aaagtcttta agatagcggc ttaatggccg
     8881 tcttttcagg tgctgcacca tcattaagaa ctcctggtag tcaaagttaa agtgcggcat
     8941 ttactgacgt tataacttac ccagtttagt gcttaaccgt ttaatggcct ggctgtgtaa
     9001 ctgactgacc cgcgattccc cgacctccag caccgcgcca atctctttga gattcagctc
     9061 ttcctggtaa tagagggtta ataccagttt ttcgcgctcc ggcaacgttt cgatagcttc
     9121 catcacccgc tggcgcagat tactgtccag cagttgttgt agcgggtttt ctcgctgatg
     9181 atcatcagta accagttcga tgctatcgcc gtgctcttcg cgccactcat cgtaggagaa
     9241 aagctggctg ttattggtgt cgagcaacat ttggcgataa tcggcaatat cgatccctaa
     9301 acgttccgct acctcagttt ccgtggcgtt gcggccaagt tcctgctcca gttgccctat
     9361 tgcctgtgcc acttcacgcg cgttgcgtcg cacgctgcgc ggcacccagt cacggctgcg
     9421 aagttcatcc agcatagcgc cacggatacg ctgcactgcg taagttgtaa atgccgttcc
     9481 ttgtagggcg tcatagcgtt cgacggcatt aagtaaccca atgccgcccg cctgtagcag
     9541 atcgtcaagt tccacgctcg cgggcagtcg aacctgcagg cgcaatgctt cgtgacgcac
     9601 cagcgggaca taacgctgcc acagcgagtg tttatccatt acaccttcag cggtatagag
     9661 tgaattcacg ataaacagcc ctgcgttata tgagttatcg gcatgattat ccgtttctgc
     9721 agggttttta atcggacgat tagtgggtga aatgaggggt tatttggggg ttaccggtaa
     9781 attccatgca gaaaaaaccc cgccggtggc ggggaagcac gttgctgaca aattgcgctt
     9841 tatgttgccg gatgcggcgt aaacgcctta tccggcctac aaaaatgtgc aaattcaata
     9901 aattgcaatt caccttgtag gcctgataag tgcagcgcat caggcaattt ggcgttgccg
     9961 tcagtctcag ttaatcaggt tacgacgatt aaccctgcag cagagacaga acctgctgcg
    10021 gtacctggtt ggcttttgcc agcacggagt taccggcctg ctggatgatc tgcgctttcg
    10081 acatgttgga cacttcggtc gcatagtcgg cgtcctgaat acgggactgc gcttcagaca
    10141 ggttggtagt ggtgttgttc aggttggtga ctgcagaatc cagacggttc tgaatagcac
    10201 ccagggatga acggaatttg tcgatggagc tgatagcttc atccagggca gccagaggat
    10261 ctttggttgc agtgcctgca ctggtggttt cagtggtcag tttgcctgta gagttaacat
    10321 aagcctgtgc cccaacagta gctgcaaatt taccagttgc acctgcgcca tttgaagcta
    10381 cagttactgt accggtatcc ttatcgacgt tgtagttgat agtgtaagat gcggttgtgg
    10441 tgagctcttt gtctgcatca gtataggtgt cattcgaatt accagcacca ttagtattcg
    10501 caccaccgaa ggacgccgtt gcagactgaa tacctgtatt atacttaatt gtcgcaccag
    10561 taactgctgt gttagccgtt gcagcactct gcactgtgct cagtacagta tcagcgctta
    10621 cagttttggt gtaggttacg ccagaagttg ccgctgcacc aaagttataa gttgtgccag
    10681 acaactggat agaaccagtt gtcgctaagg tactaccgct agcaaacaga tcggacaatt
    10741 tcgctgaaga tgcaatgccg gcgttgtttg tagataggtt accagtggcg tccaggtacg
    10801 cggctttacc accgatggtc acatcgccat tagcatctac atcaaacttc acatcaccag
    10861 tactacgagt ataaacacct gatgcagtag tgccagccgc tggtttcaga gtattcgcaa
    10921 agttaacaac atcgccatct gcaactgttg cttgagtggt gaagttccct ttagccgcat
    10981 cataagtata gatcgcagca ctcgagccag tagtagtaac tgtatctccg gttttcaggc
    11041 gagacagtgc atcgctagcg ctgagtgctg tattgtttgt ggtcacagca taaggacctg
    11101 ttcccgttgc accagcagcg gtcagatcgc tgactgtagc agctttgttc gcaatagtgc
    11161 ctttgccatt cacgttaaaa ccattcagcc ccagcgtatc tgagtcaatt ttcttcagat
    11221 caatcgtgat agtctggccg tcattcgcac caacctgaat tttcattgaa ccgtctttcg
    11281 ccagtacgtt cacgccgttg aactgggtct ggccagatac gcggtcaatt tcgtccagac
    11341 gggatttgat ttcgtcctga atggagtcca gatccgaatc ggagttagtc ccggtagaag
    11401 cctgaaccgt cagttcaaga atacgctgta agttgttgtt gatttcggac agcgcgcctt
    11461 cagtggtctg cgcaacggag ataccgtcgt tggcgttacg ggccgcctga gtcaggcctt
    11521 taatattaga agtaaaacgg ttagcaatcg cctgacctgc ggcgtcatcc ttcgcgctgt
    11581 taatacgcaa gccagaagac agacgctcga tagaactcga cagcgcagac tggttcttgt
    11641 tgatattatt ttgagtgatc agcgagaggc tgttggtatt aatgacttgt gccatgattc
    11701 gttatcctat attgcaagtc gttgattacg tattgggttt ccacccgtcg gctcaatcgc
    11761 cgtcaaccct gttatcgtct gtcgtaaaac aacctctaga atttttttca caaacagcca
    11821 ttttttgtta gtcgccgaaa tactcttttc tctgcccctt attcccgcta ttaaaaaaaa
    11881 caattaaacg taaactttgc gcaattcagg ccaataaccc cggtattcgt tttacgtgtc
    11941 gaaagataaa aggaaatcgc atggcaagta tttcatcgct gggagtcggg tcaggtctgg
    12001 atttaagttc aatccttgat agcctcaccg ccgcgcaaaa agcgacgcta acccctattt
    12061 caaatcagca atcgtcgttt accgctaaac ttagcgccta cggtacgctg aaaagcgcgc
    12121 tgacgacttt ccagaccgcc aatactgcat tgtctaaagc cgatcttttt tccgccacca
    12181 gcactaccag cagcaccacc gcgttcagtg ccaccactgc gggtaacgcc atcgccggga
    12241 aatacaccat cagcgtcacc catctggcgc aggcgcaaac cctgaccacg cgcaccacca
    12301 gagatgatac gaaaacggcg atcgccacca gcgacagcaa actcaccatt caacaaggcg
    12361 gcgacaaaga tccgattacc attgatatca gcgcggctaa ctcatcgtta agcgggatcc
    12421 gtgatgctat caacaacgca aaagcgggcg taagtgcgag catcattaac gtgggtaacg
    12481 gtgaatatcg tctgtcagtc acatcaaatg acaccggcct tgataatgcg atgacactct
    12541 cggtcagcgg tgatgatgcg ctacaaagtt ttatgggcta tgacgccagt gccagcagca
    12601 acggtatgga ggtctcggtc gccgccaaga atgcgcagct gacggtcaac aacgtcgcca
    12661 ttgagaacag cagcaacacc atcagcgacg cgctggaaaa catcaccctg aacctgaacg
    12721 atgtcaccac gggcaaccag acgctaacca tcactcagga cacctccaaa gcgcaaacgg
    12781 cgattaaaga ctgggtgaat gcctataact cgttaataga taccttcagt agcctgacca
    12841 aatacaccgc cgtagatgcg ggagctgata gccagagttc tagcaatggc gcactgctcg
    12901 gcgactccac gctgcggacg attcagacgc agttgaagtc gatgctgagt aataccgtca
    12961 gttcttccag ctataaaacg ctggcgcaga ttggtatcac gaccgatccc agcgatggca
    13021 aactggaact ggatgccgac aaactcaccg ctgcactgaa aaaagatgcc agcggcgtag
    13081 gtgcattgat tgttggcgat ggtaaaaaaa ccggcatcac gaccaccatc ggcagcaacc
    13141 tgaccagttg gctttcgaca acgggcatta ttaaagccgc taccgatggc gttagtaaga
    13201 ccctgaataa gttaactaaa gactacaacg ccgccagcga tcgcattgat gcgcaggtcg
    13261 cgcgctacaa aaaacaattt acccaactgg acgttttaat gacctcgtta aacagcacca
    13321 gcagctactt aacgcagcag ttcgaaaaca acagtaattc caagtaatca ttattcatcg
    13381 ggagacaggt catgtacgcg gcaaaaggca cccaggccta tgcacaaatt ggcgtcgaaa
    13441 gcgccgtaat gagcgccagc cagcagcagc tggtcaccat gctatttgat ggagtgctga
    13501 gcgcactggt tagagcgcgc ctgtttatgc aggacaacaa tcagcaaggc aaaggcgtct
    13561 ctttgtcaaa agcgatcaac atcattgaga acggactgcg ggtgagtctt gatgaagaga
    13621 gcaaagacga actaacccaa aacttgattg ctctttatag ctatatggtc aggcgcttgc
    13681 tgcaagccaa tttacgcaac gatgtctccg cagtcgaaga agtggaagca ttaatgcgca
    13741 atattgccga tgcctggaaa gagtcgttac tctccccttc tttgattcag gacccagtct
    13801 gatgaaccat gcaccgcatt tgtatttcgc ctggcaacaa ctcgtcgaaa aaagccagct
    13861 catgttacgc ctggcaacgg aagaacaatg ggacgaactc atcgccagcg aaatggcgta
    13921 tgtgaatgcg gtgcaggagt atagcacacc tgactgaaga ggttgccccg tccaccacga
    13981 tgcaggagca gctccgcccg atgctgcgcc tgattctcga caacgaaagc aaggtaaagc
    14041 agttattaca gattcgtatg gatgaactgg cgaaactggt cggtcagtca tcggtgcaaa
    14101 aatcggtgtt aagtgcctat ggcgatcagg gcggctttgt gctggctccg caagataact
    14161 tctcgtgaat cttaacgagc taatggttcg cgaataatcc gattacggct acgcttctaa
    14221 tgttcccctt gaatggagtc gaagaatgcg taatcccacg ctgttacaat gttttcactg
    14281 gtattacccg gaaggcggta agctctggcc tgaactggcc gagcgcgccg acggttttaa
    14341 tgatattggt atcaatatgg tctggttgcc gcccgcctat aaaggcgcat cgggcgggta
    14401 ttcggtcggc tacgactcct ataatttatt tgatttaggc gagtttgatc agaaaggcag
    14461 catccctact aaatatggcg ataaagtaca attgctggcc gccattgacg ccctgaaacg
    14521 taatgacatt gcggtgctgt tggacgtggt agtcaaccac aaaatgggcg cggatgaaaa
    14581 agaagctatt cgcgtgcagc gtgtaaatgc tgacgaccgt acgcaaattg atgaagaaat
    14641 cattgagtgc gaaggctgga cgcgttacac cttccccgcc cgtgccgggc aatactcaca
    14701 gtttatctgg gatttcaaat gttttagcgg tatcgaccat atcgaaaacc ctgatgaaga
    14761 tggcatattt aaaattgtta acgactacac cggcgaaggc tggaacgatc aggttgatga
    14821 tgaattaggt aatttcgatt atctgatggg cgagaatatc gattttcgca atcatgccgt
    14881 gacggaagag attaaatact gggcgcgctg ggtgatggaa caaacgcaat gcgacggttt
    14941 tcgtcttgat gcggtcaaac atattccggc gtggttttat aaagagtgga tcgaacacgt
    15001 acaggaagtt gcgccaaagc cgctgtttat tgtggcggag tactggtcgc atgaagtcga
    15061 taaactgcaa acgtatattg atcaggtgga aggcaaaacc atgctgttcg atgcgccgct
    15121 gcagatgaaa ttccatgaag catcgcgcat ggggcgcgac tacgacatga cgcagatttt
    15181 cacgggtaca ttagtggaag ccgatccttt ccacgccgtg acgctcgttg ccaatcacga
    15241 cacccaaccg ttgcaagccc tcgaagcgcc ggtcgaaccg tggtttaaac cgctggcgta
    15301 tgccttaatt ttgttgcggg aaaatggcgt tccttcggta ttctatccgg acctctacgg
    15361 tgcgcattac gaagatgtcg gtggtgacgg gcaaacctat ccgatagata tgccaataat
    15421 cgaacagctt gatgagttaa ttctcgcccg tcagcgtttc gcccacggtg tacagacgtt
    15481 atttttcgac catccgaact gcattgcctt tagccgcagt ggcaccgacg aatatcccgg
    15541 ctgcgtggtg gtcatgtcga acggggatga tggcgaaaaa accattcatc tgggagagaa
    15601 ttacggcaat aaaacctggc gtgattttct ggggaaccgg caagagagcg taataaccga
    15661 cgaacacggc gaagcaacct tcttttgcaa cggcggcagc gtcagcgtgt gggttatcga
    15721 agaggtgatt taaattcatc cccggcggca agccggggag atttcattac ggcagtggcg
    15781 tcggtaacgg cgctttatcc agcgcggcgg cacactctgc cgtcgggcga tccacacgct
    15841 ccatcgtcat accatcgtac tcaatggtgt taccgtcacg ctcaacctcg tacagctcac
    15901 gttttacggt aacgttagtg agatcatcag acatcaatgc caacttaccc ggcacagcaa
    15961 tcacccgctg ccactgacgg caatccagag tatcaccctc tttagtgaca atcaggctgc
    16021 ctatcgcttc cggactgacc agcgcacgtt gcggcccttt ggtctgccag tagcccgcca
    16081 gccagtccgg cgcgggggtt ttcacgacat tgttatagtt ttcgacttcg gcacagcccg
    16141 ccagcaacat gagcgcgcct gcaattgcga gttttttcat cattcgtcct gcatgagaag
    16201 aaaagaggat tgtggcatta aagccctgat gtcgccagcc tttccaggtt cagagagaaa
    16261 tttgatctaa ctattatttt tgtgaattat taccccgaaa ataaatttgc atgatgtatg
    16321 attcgcgact cttgtttcaa accttctgag ttcagaggct acattcatgt catggcagca
    16381 attcaaacac gcctggttga ttaaattctg ggcacccatc cctgcggtca tcgcggcggg
    16441 tattctctcc acttactatt ttggcattac tggcaccttt tgggctgtca cgggtgaatt
    16501 tacccgttgg ggcggccagc tcctgcagct gtttggcgtc catgctgaag agtggggtta
    16561 ttttaaaatt atccatctgg aaggatcgcc attaacccgc atcgacggga tgatgatcct
    16621 cggcatgttt ggcggctgct ttgccgcagc gctgtgggcc aacaatgtca aactgcgcat
    16681 gccacgcagc cgtatccgca ttatgcaggc cattattggc ggtattatcg ctggttttgg
    16741 cgcgcgtctg gcaatgggct gtaacctggc ggcgttcttt accggtattc ctcagttctc
    16801 gctgcatgcc tggttctttg ccatcgccac tgccattggt tcatggtttg gcgcacgctt
    16861 taccctgctg cccatcttcc gtattcccgt gaaaatgcag aaagtttctg ccgcctcacc
    16921 gctgacgcaa aaaccggatc aggcgcggcg tcgttttcgt ctcgggatgc tggtcttttt
    16981 cggtatgctg ggctgggcgc tgctcacggc gatgaaccaa ccaaaactgg ggctggcaat
    17041 gctgtttggc gtcggctttg gtttactgat tgaacgtgcg caaatctgct ttacttcggc
    17101 gttccgcgat atgtggatca ccggacgtac ccatatggcg aaagcaatca ttatcggtat
    17161 ggcggtgagt gccatcggga tcttcagtta cgtacagtta ggcgttgaac ccaaaatcat
    17221 gtgggcggga ccaaacgcgg taattggtgg tttactgttt ggttttggca tcgtgctggc
    17281 aggcggctgc gaaaccggct ggatgtaccg cgcggtagaa ggccaggtgc actactggtg
    17341 ggtcggtctg ggcaatgtga tcggctcgac gattctggcg tattactggg atgatttcgc
    17401 tccggcgctg gccaccgact gggacaaaat caacctgctg aaaacctttg gcccgatggg
    17461 tggcctgctg gtgacatatt tgctgttgtt tactgcgctg atgttgatta tcggctggga
    17521 aaaacgcttc ttccgccgtg cggcaccgca gactgctaag gagatcgcat gaaaaatatc
    17581 gttcctgatt accgccttga tatggtgggt gaaccctgcc cttatccggc agtcgcaacc
    17641 cttgaggcga tgccgcagtt aaaaaaaggg gaaatcctgg aagtggtgag cgactgtcca
    17701 cagtcgatca ataatattcc actggatgcg cgtaatcacg gctatacggt gcgggatatt
    17761 cagcaagacg ggccgaccat tcgttattta attcagaagt aatccctcat tcccgctgtg
    17821 gcccacagcg ggaacatcgt tgcctctgac acatagattt tacccgcccc ctctcctatt
    17881 cttttcagta tgatctcagg aggtttctat gtgtggacgc tttgcccaat cccaaacgcg
    17941 tgaagattac cttgcgcttc tcgcggaaga tattgaacgc gatattccct acgatcccga
    18001 acccattggc agatacaacg tcgcgccggg aaccaaagtt cttctgctca gtgaacgtga
    18061 tgaacacctt catctggatc cggttttctg gggatatgct cccggatggt gggataaacc
    18121 gccgctgatt aacgcccgcg tagaaactgc cgcaaccagt cgcatgttta aaccgctctg
    18181 gcaacatggt cgggcaatct gttttgccga tggctggttt gagtggaaaa aagaaggcga
    18241 caaaaaacag ccttttttta tctatcgtgc tgatggacaa cctattttta tggccgcgat
    18301 aggtagcaca ccatttgagc atggtgacga agccgaagga tttttaattg tcactgctgc
    18361 agcagaccag ggtctggtag acattcatga ccgccgcccg ctggttctgt cgccagaagc
    18421 tgcacaggaa tggatgcggc aagagattgg cggtaaagaa gcatcagaaa ttgctaccaa
    18481 cggctgtgtg ccagcaaacc agttcacctg gcacccggta tcgcgcgcgg taggtaatgt
    18541 caaaaaccag ggcgcggagt taattcaacc tgtttgttga catcctccac gccctgaagg
    18601 acgaggctcc ctgctacgtt caggctgtcg cctgaatcat ttcggtgggt tcctgcttca
    18661 acgggcggcc tgactgcacc atctctccac aggcaagaac ggcgtgcccc gccgctaaaa
    18721 tgttacgagc gccatttaca tcggcgttcg ctgtatatcc acatacctgg catctgaatt
    18781 tactttgtga caggcggttt tctttcgctg tatgaccaca gcacgcgcaa cgctggcttg
    18841 tgcacgctgg cggaacagca aacacctgac cgccac
//
LOCUS       DADKRT010000078        18506 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.079, whole genome shotgun sequence.
ACCESSION   DADKRT010000078 DADKRT010000000
VERSION     DADKRT010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18506
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.079"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..893
                     /locus_tag="JQ356_002229"
     CDS             <1..893
                     /locus_tag="JQ356_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4622309.1"
                     /translation="WFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFIT
                     IGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTM
                     WGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMTAIPFLFGAAGMLVNGYVT
                     DWLVKGGMAPIKSRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTS
                     CRGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTA
                     AGALAYIFLVRQPINDPRKD"
     gene            complement(942..2597)
                     /gene="tsr"
                     /locus_tag="JQ356_002230"
     CDS             complement(942..2597)
                     /gene="tsr"
                     /locus_tag="JQ356_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY4622310.1"
                     /translation="MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQ
                     TIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAE
                     KNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQ
                     DGFEKQYVAYMEQNDRLYDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASL
                     VAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANA
                     IYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
                     ETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVT
                     RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEESAAAAAALEEQASRL
                     TEAVAVFRIQQQQRETSAVVKTVTPAAPRKMAVADSEENWETF"
     gene            complement(2716..3162)
                     /gene="hpaR"
                     /locus_tag="JQ356_002231"
     CDS             complement(2716..3162)
                     /gene="hpaR"
                     /locus_tag="JQ356_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HAY4622311.1"
                     /translation="MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESP
                     SMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRA
                     QTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEAIPGDNE"
     gene            3434..4723
                     /locus_tag="JQ356_002232"
     CDS             3434..4723
                     /locus_tag="JQ356_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
                     /protein_id="HAY4622312.1"
                     /translation="MKGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNT
                     VIGCGEPIPFPQGEKVLSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESF
                     YRPAIKAKCRDGFCPIGETVALSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSAL
                     SEFATLNPGDAILLGTPQARVEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTQ
                     PHPHGTLFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYE
                     AELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPML
                     STIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIA
                     TGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSEDTAK"
     gene            4720..6186
                     /gene="hpaE"
                     /locus_tag="JQ356_002233"
     CDS             4720..6186
                     /gene="hpaE"
                     /locus_tag="JQ356_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate semialdehyde
                     dehydrogenase"
                     /protein_id="HAY4622313.1"
                     /translation="MKKVNHWINGKNVAGNDYFQTTNPATGEVLADVASGGEAEINQA
                     VAAAKEAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIP
                     RASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAP
                     CLALGNTAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRDHDVR
                     AVSFTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFEDADIERALDAALFTIFSINGE
                     RCTAGSRIFIQQSIYPEFVKRFAERANRLRVGDPNDPNTQVGALISQQHWEKVSGYIR
                     LGIEEGATLLAGGPDKPSDLPAHLKGGNFLRPTVLADVDNRMRVAQEEIFGPVACLLP
                     FKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGG
                     VKASGTGREGGEYSFEVFAEMKNVCISMGDHPIPKWGV"
     gene            6188..7039
                     /gene="hpaD"
                     /locus_tag="JQ356_002234"
     CDS             6188..7039
                     /gene="hpaD"
                     /locus_tag="JQ356_002234"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HAY4622314.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLI
                     ADEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
                     GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWRE
                     GQFKEFCNMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVN
                     AVFPLPA"
     gene            7049..7429
                     /locus_tag="JQ356_002235"
     CDS             7049..7429
                     /locus_tag="JQ356_002235"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HAY4622315.1"
                     /translation="MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRV
                     HWVDTWQMADGQRDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLA
                     LSFEIEELHPTLNFKQNNVHALFK"
     gene            7540..8343
                     /gene="hpaH"
                     /locus_tag="JQ356_002236"
     CDS             7540..8343
                     /gene="hpaH"
                     /locus_tag="JQ356_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HAY4622316.1"
                     /translation="MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQR
                     EWVRLKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIV
                     PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWL
                     ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGSISCRFV"
     gene            8354..9142
                     /gene="hpaI"
                     /locus_tag="JQ356_002237"
     CDS             8354..9142
                     /gene="hpaI"
                     /locus_tag="JQ356_002237"
                     /EC_number="4.1.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxoheptanedioate aldolase"
                     /protein_id="HAY4622317.1"
                     /translation="MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGE
                     HAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAR
                     EAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI
                     LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIANEQL
                     AKRYLELGALFVAVGVDTTLLARAAEALAARFGAQATAVKPGVY"
     gene            9317..10693
                     /gene="hpaX"
                     /locus_tag="JQ356_002238"
     CDS             9317..10693
                     /gene="hpaX"
                     /locus_tag="JQ356_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HAY4622318.1"
                     /translation="MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRW
                     IATIMVLWGIASTATMFATGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARA
                     NALFMVAMPVTTALGSIVSGYILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDD
                     SPDKAKWLTKEDKKCLQEMMDNDRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTL
                     AYFCLTNTLSAISIWTPQILQSFNQGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQ
                     ERRHHTALPYLFAAAGWLLASATDHNMIQMLGIIMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALSPFMIGWLKDLTGSFNSGLWFVAALLVIGAGIIWAIPMQ
                     SSRPRATP"
     gene            10703..11589
                     /gene="hpaA"
                     /locus_tag="JQ356_002239"
                     /pseudo
     CDS             10703..11589
                     /gene="hpaA"
                     /locus_tag="JQ356_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
     gene            11840..13402
                     /gene="hpaB"
                     /locus_tag="JQ356_002240"
     CDS             11840..13402
                     /gene="hpaB"
                     /locus_tag="JQ356_002240"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HAY4622319.1"
                     /translation="MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPA
                     FRNAAASVAQLYDALHKPEMQDSLCWNTDTGSGGYTHKFFRVAKSANDLRQQRDAIAE
                     WSRLSYGWMGRTPDYKAAFGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNP
                     PIDRHLPTDKVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENP
                     DFALMFVAPMDADGVKLISRASYEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPW
                     ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTLEFRG
                     VQADLGEVVAWRNTFWALSDSMCSEATPWVNGAYLPDHAALQTYRVLAPMAYAKIKNI
                     IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVQHIKILKLMWDAIGSEF
                     GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVPHLHN
                     NDDINMLDKLLK"
     gene            13420..13932
                     /locus_tag="JQ356_002241"
     CDS             13420..13932
                     /locus_tag="JQ356_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HAY4622320.1"
                     /translation="MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVT
                     DTPPSLMVCINANSAMNPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSC
                     WQKGPLAQPVLKGSLASLEGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFH
                     PVMLEMEAAI"
     gene            14325..16475
                     /gene="btsT"
                     /locus_tag="JQ356_002242"
     CDS             14325..16475
                     /gene="btsT"
                     /locus_tag="JQ356_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313340.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HAY4622321.1"
                     /translation="MDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
                     PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPV
                     PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
                     RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
                     ILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT
                     IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLY
                     FAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQT
                     AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
                     TRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
                     PLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNP
                     QMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYG
                     FKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH"
     gene            16606..16809
                     /locus_tag="JQ356_002243"
     CDS             16606..16809
                     /locus_tag="JQ356_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY4622322.1"
                     /translation="MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSY
                     EEFFRERQNARYGGDGKGGMRCC"
     gene            16820..17776
                     /gene="yjiA"
                     /locus_tag="JQ356_002244"
     CDS             16820..17776
                     /gene="yjiA"
                     /locus_tag="JQ356_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313338.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HAY4622323.1"
                     /translation="MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMA
                     DPGPIIQTFFSHEILCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT
                     DVAGEAEKLRERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIA
                     DKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDEKPHSTMVFIGIQLPEDEIRAAFAGLKK"
     gene            complement(17878..>18506)
                     /locus_tag="JQ356_002245"
     CDS             complement(17878..>18506)
                     /locus_tag="JQ356_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin acylase"
                     /protein_id="HAY4622324.1"
                     /translation="PGSAILNVWLTSMLKRTVVAAVPMPFDKWYSASGYETTQDGPTG
                     SLNISVGAKILYEAVQGDKSPIPQAVDLFAGKPQQEVVLAALEDTWETLSKRYGNNVS
                     NWKTPAMALTFRANNFFDVPQAAAEETRHQAEYQNRGTENDMIVFSPTTSDRPVLAWD
                     VVAPGQSGFIAPDGTVDQHYEDQLKMYENFGRKSLWLTKQDVEAHKES"
BASE COUNT         4226 a         5125 c         4938 g         4217 t
ORIGIN      
        1 actggttcaa catcaaagag cgcggacgcc cgatgggctt cttcaacgca gcttctacca
       61 ttggcgttgc cgtaagccca ccgattctgg cggcgatgat gctggtgatg ggctggcgcg
      121 ggatgtttat taccattggt gtactgggga tttttctcgc catcggctgg tatatgctct
      181 atcgcaaccg cgagcacgta gaactgactg ccgttgagca agcttatctc aatgcaggta
      241 gcgtcaatgc ccgccgagat ccgctcagtt ttgccgaatg gcgcagcctg ttccgtaacc
      301 gtacaatgtg gggaatgatg ctcggattca gtggcatcaa ctacactgcg tggctgtatc
      361 tggcctggct tcctggttac ctgcaaacag cctataacct ggatttaaaa agcacagggt
      421 tgatgacggc tatccctttc ctgtttgggg ctgccgggat gctggtcaac ggttacgtta
      481 ccgactggct ggtcaaaggg ggaatggctc cgattaaaag ccgtaagatc tgcattattg
      541 ccgggatgtt ctgttctgcc gcctttacgc tgatagtacc acaagcgaca acatccatga
      601 cggcggttct gctgattggc atggcactgt tctgtattca ctttgccgga acatcctgcc
      661 ggggcttgat ccacgtcgca gttgcttctc gcatgactgc gtcggtgggc agtatccaga
      721 actttgccag cttcatctgc gcctcttttg cgccgatcat tactggtttt attgttgata
      781 ccacccactc attccgtctg gcactaatca tctgcggttg cgtcaccgca gcgggggcac
      841 tggcgtacat cttcctggtt cgtcagccga tcaacgaccc acgtaaagat taatctcctt
      901 atgcccgata acattttgct tatcgggcat tttcatggcg attaaaatgt ttcccagttc
      961 tcctcgctat ctgccacggc cattttacgc ggcgcagctg gcgtcacggt ttttaccaca
     1021 gccgatgttt cacgctgctg ttgctgaatc cggaacactg ccactgcttc ggtcaggcga
     1081 ctggcctgct cttccagcgc ggcggcggca gcggcagact cttccaccag cgcggcgttc
     1141 tgttgagtta cccggtccat ctcagcaacc gctaagccaa cctgatcgat accacggctc
     1201 tgctcatcag aagcagaagc aatttcgccc ataatgtccg tcacgcgggt cacggcgctg
     1261 acaatctccg ccattgtttc cccggcgctt tcgaccagcg tagagccaac atccactttc
     1321 cccaccgagt cttcaatcag gcttttaatt tcacgagccg cctgggcgct gcgctgggcc
     1381 agattacgca cttctcccgc gaccaccgca aaaccgcgcc cttgctcacc cgcacgcgca
     1441 gcctcaaccg ccgcgttcaa agccagaata ttggtctgga aggcaatgcc gtcaattacg
     1501 ctgataatat cggcgatttt ctgcgaactg gtggagatat cgcgcatagt ctgcaccacg
     1561 ttatctacca ctttgccgcc gcgttgcgcc gtttcagaag cacttaacgc cagatggctg
     1621 gcctggcgcg cattttcggc gttctgcttc accgttgcgg tcagttgctc catgctggct
     1681 gccgtctctt ccagcgaagc ggcctgttgc tcggtgcgcg aagagagatc gttattgccg
     1741 gtggcgattt cgctggcacc gctatagatg gcattggccc cgttgcgcac atcaccgacg
     1801 gtacgcatca gctctccctg catatggcgc aaactctctg ccagttgccc catctcatta
     1861 gagccatcca cctcaatcgg tttcaccaga tcgccgcctg caatatgacg aatgctgtca
     1921 atcaggcgat tcattggcgc taccagcgag gctttaatac cgaaccagac ggcgaagatg
     1981 accgccagta cgacgatcat cacgcccacc agaatccaca tcgcctggct gtaggaggca
     2041 ttgttatcgc tgacggcgat atcatagagc cgatcgtttt gctccatgta agccacatac
     2101 tgcttctcga aaccgtcctg atatccctgg gtcggctgat caaagaactc gttgattttg
     2161 cctgcaccta acagttggat cagctccgcc agcgcattgt gataaatatc gtaattacgt
     2221 ttgatctctg ccgctgcggc ggtgctctga cgcgggtcac gcggcaacgc ttcgtaatcc
     2281 gcccagtttt tttccgcctg tttcagcgaa atactggcac tctgcatcag ctcagcaacg
     2341 gttgaaccgc taccaatatt attctgatcc atcatgtagc ggatacccgc gcggttgagg
     2401 gtgttacgcg tctgcaacaa cgcgacccag ctgccattca gcgtggattg ctgctggcga
     2461 atggtttgta aaacagtgaa attttctttg tcattcttta aggcattaaa gaacagaccg
     2521 cctgatgtca gttgtaaaag gccaaaaacg gccaaaacca gcagtaagct ggtcacgatc
     2581 ttgatacgtt ttaacatggt ttctctttcc tgtggaccga tgcaagattt tcggcctgga
     2641 aagcaaaaac tttatgaaaa ggtgtaaccc gccatccatg gaaaaaccag gcgctggtta
     2701 tcagatacta aaaagttatt cattatcgcc cgggatggct tcttgtcggg aattgcccag
     2761 agcaataaat tcctctaaca gatgggttaa ctgttgcatt ttctcggcag taaactgagc
     2821 ttcaatctgc cgataggctt cttcaatctg tgtctgagcg cggttataca gcgcctgccc
     2881 ctctttggtt agcgagatat agagcttccg ctgatcattg atcggcttta atcgcaacac
     2941 taaaccgtcg cgttccatcc gcgtgagaat cccggtcagg cttgggcgca aaatgcaggc
     3001 gcgatacgcc agatcgtgaa aatccattga tgggctttcc gccagaatac gcacgatgcg
     3061 ccactgttgc tcagtcaaat tatgccgttt aacgattggg cgaaaataac tcatcgccgc
     3121 ttctcgcgcc tggagcaacg caatggttag tgagtcgtgc attatctttc ccctgaaaaa
     3181 ttcaaaatca ttaatataga aacagttaat cgtcacgtta ccgggactgc gctgcccctg
     3241 caattcctga ttttatcaaa attgatgata ttttattaac ttactgatat ttaatatttt
     3301 attatcttta aatgtaaata gtttgttaat tagatcacat ttacatcact tacttttgcc
     3361 aaactacgca atcgggaata aaagcaatca ttaacatatt aatgattaag ataatcgaat
     3421 ccgaggagtg gtaatgaaag gcactatctt cgccgtagcg ttgaaccatc gcagccaact
     3481 tgatgcatgg caggaagcgt tccagcaatc cccctacaaa gccccgccta aaactgcggt
     3541 ctggtttatt aaaccgcgca atacggtgat tggttgcggt gaaccgattc cctttccaca
     3601 gggtgaaaag gtactgagcg gtgcgactgt tgcgctgatt gtgggaaaaa cggcgacgaa
     3661 agtacgtgaa gaagatgcgg cagagtacat cgccggatat gcgctggcta acgacgtcag
     3721 cctgccggaa gagagctttt accgcccggc aatcaaagca aaatgtcgtg atggattctg
     3781 ccccattggc gaaaccgtgg ctctcagcaa tgtcgataat ctgaccatct ataccgagat
     3841 caacgggcgt cctgccgatc actggaatac cgccgattta caacgtaacg ccgcgcagtt
     3901 gctgagcgcc ctgagcgaat ttgccacgct gaatccaggc gacgccattc tgctcggcac
     3961 gccacaggcg cgcgtggaaa tacagccagg cgatcgcgtt cgtgttctcg cagaaggttt
     4021 cccgccgctg gaaaatccgg tagtggacga acgtgaagtg accacgcgca agagcttccc
     4081 aacgcagcca cacccgcacg gcacgctgtt tgccctcggc ctgaactacg ccgaccacgc
     4141 cagcgaactg gaatttaagc caccggaaga accgctggta ttcctgaaag cgccaaatac
     4201 cctcactggc gataaccaga cctccgtgcg tccaaacaat attgaataca tgcactatga
     4261 agcggagctg gtggtagtta ttggcaaaca ggcgcgtaac gtcagcgaag ccgatgccat
     4321 ggattatgtc gcgggctaca ccgtgtgtaa cgactacgcc attcgtgact atctggaaaa
     4381 ctactaccgc cctaacctgc gggtaaaaag ccgcgacgga ctgacgccga tgctttcaac
     4441 catcgtgccg aaagaggcga tcccggaccc gcataatctg acccttcgca ccttcgtcaa
     4501 cggcgagtta cgccagcaag gcaccaccgc cgatctgatc ttcagcgtgc ccttcctgat
     4561 cgcctactta agtgaattta tgaccctgaa tccgggcgac atgatcgcca ccggcacacc
     4621 caaaggctta tctgacgtgg tgcctggcga tgaagtagtg gtggaagtag aaggcgtggg
     4681 ccgcctggtg aaccgaattg tgagtgagga tacagcgaaa tgaaaaaagt aaatcattgg
     4741 atcaacggca aaaatgttgc aggtaacgac tacttccaga ccaccaatcc ggcaacgggt
     4801 gaagtgctgg cggatgtggc ctctggcggt gaagcggaga tcaatcaggc ggtagcggca
     4861 gcgaaagagg cgttcccgaa atgggccaat ctgccgatga aagagcgtgc gcgcctgatg
     4921 cgccgtctgg gcgatctgat cgaccagaac gtgccagaga tcgccgcgat ggaaaccgcg
     4981 gacaccggcc tgccgatcca tcagaccaaa aatgtgttga tcccacgcgc ttcccacaac
     5041 tttgaatttt tcgcggaagt ctgccagcag atgaacggca agacctatcc ggttgacgac
     5101 aagatgctca actacacgct ggtgcagccg gtgggcgttt gtgcgctggt atcgccgtgg
     5161 aacgtaccgt ttatgaccgc cacatggaag gtcgcgccgt gtctggcgct gggcaatacc
     5221 gcggtactga aaatgtcgga actctccccg ctgaccgctg accgcctggg tgagctggcg
     5281 ctggaagccg gtattccggc aggcgtgctg aacgtggtac agggctacgg cgcaaccgca
     5341 ggggatgcgc tggttcgtga tcatgacgta cgtgccgtgt cgttcaccgg cggtacggcc
     5401 accgggcgca acatcatgaa aaacgccggg ctgaaaaaat actccatgga actgggcggt
     5461 aaatcgccgg tgctgatttt tgaagatgcc gatattgaac gcgcgctgga cgccgccctg
     5521 ttcaccatct tctcgatcaa cggcgaacgc tgcaccgccg gttcacgcat ctttattcag
     5581 caaagcatct acccggaatt cgttaaacgc tttgccgaac gcgccaaccg tctgcgcgtg
     5641 ggcgatccga acgatccgaa tacccaggtt ggcgcgctta tcagccagca gcactgggaa
     5701 aaagtctccg gctatatccg tctcggcatt gaagaaggcg ccaccctgct ggcgggcggc
     5761 ccggataaac cgtctgacct gcctgcacac ctgaaaggcg gcaacttcct gcgcccaacg
     5821 gtgctggcag acgttgataa ccgtatgcga gtcgcccaag aagagatttt cgggccggtc
     5881 gcctgcctgc tgccgtttaa agacgaagct gaaggcttac gcctggcaaa cgacgtggag
     5941 tacggcctcg cgtcgtacat ctggacacag gatgtcagca aagtgttacg cctggcgcgt
     6001 ggcattgaag ctggcatggt gttcgtcaac acccagaacg tgcgtgacct gcgccagcca
     6061 tttggcggcg taaaagcctc cggcaccggg cgtgaaggcg gtgagtacag cttcgaagtg
     6121 ttcgcggaaa tgaagaacgt ctgcatttcc atgggcgacc atccaattcc gaaatgggga
     6181 gtctgatatg ggtaagttag cgttagccgc caagatcacg cacgtaccgt cgatgtatct
     6241 ctctgaactg ccagggaaaa accacggttg ccgccagggc gcgatcgacg ggcataaaga
     6301 gatcagcaag cgttgccggg aaatgggcgt cgataccatt atcgttttcg atacccactg
     6361 gctggtcaac agtgcttatc acatcaactg tgcagaccat tttgaaggcg tctacaccag
     6421 caacgagctg ccgcatttta tccgcgatat gacctacaac tacgagggca acccggagtt
     6481 ggggcagctt attgccgatg aagccttaaa gctcggcgtg cgggcaaaag cgcacaacat
     6541 tcccagcctg aaactggaat acggcacgct ggtgccgatg cgctacatga atgaagacaa
     6601 gcacttcaaa gtggtctcca tttcggcttt ctgcacggtt cacgattttg ccgacagccg
     6661 caagctgggc gaagcgattc tgaaagcgat cgaacagtac gacggcaccg tggcggtcct
     6721 tgccagcggt tcgttatcgc accgctttat tgacgatcag cgtgcagaag aagggatgaa
     6781 cagctacacc cgcgagttcg accgccagat ggacgagcgc gtggtgaagt tgtggcgcga
     6841 aggccagttc aaagagttct gcaatatgct gccggagtac gccgactact gctacggcga
     6901 aggcaatatg cacgacacgg tgatgctgct ggggatgctc ggctgggata aatacgacgg
     6961 caaggtggag tttatcaccg agctattccc aagctctggc accggtcagg ttaacgctgt
     7021 tttcccgctt cccgcgtaag gacgttttat gccgcacttt atcgttgaat gcagtgacaa
     7081 catccgcgaa gaagccgacc tgccggggtt gttcgccaaa gtgaatccga cgctggcagc
     7141 cacgggtatt tttccgctgg cgggtattcg cagccgcgtg cattgggtcg atacctggca
     7201 gatggccgac gggcagcgtg attatgcctt cgtgcatatg acgttgaaaa tcggcgcagg
     7261 tcgcagcctg gaaagccgtc agcaggcggg tgaaatgctg tttgaactga ttaaaacgca
     7321 cttcgccgcc ctgatggaga gccgcctgct ggcgttgtcg tttgagattg aagagctgca
     7381 tccgacgctg aattttaaac aaaacaacgt gcacgcattg tttaagtagc gcgcagattg
     7441 cccggtggcg ctgcgcttac cgggcctaca aaaccccaaa ccgtacaccg taggccggat
     7501 aaggcgcagc cgcatccggc aatgccacag gatatcgcta tgttcgataa acacacccac
     7561 accctgatcg cccagcgtct ggatcaggca gaaaaacagc gcgaacagat ccgcgcgatc
     7621 tcgctggatt acccagagat caccatcgaa gacgcttacg cggtgcagcg cgaatgggtt
     7681 cgcctgaaaa tcgccgaagg ccgtacgctg aaaggccaca aaatcggtct gacctcaaaa
     7741 gcaatgcagg ccagctcgca gatcagcgaa ccagattacg gtgccctgct ggatgacatg
     7801 ttcttccacg atggcagcga tatcccgacc gatcgcttta tcgtgccgcg cattgaagtg
     7861 gagctggctt tcgtgctggc aaaaccgctg cgtgggccaa actgcacgct gttcgacgtc
     7921 tacaacgcca cggactacgt gatcccggcg ctggagctga tcgacgctcg ctgccacaac
     7981 atcgatccgg aaacccagcg cccgcgcaaa gtgttcgaca ccatttctga taacgccgcc
     8041 aacgccgggg tgatcctcgg tggtcgtccg atcaaaccag acgaactgga tctgcgttgg
     8101 atctccgccc tgatgtatcg caatggcgtg attgaagaaa ccggcgtcgc cgctggcgtg
     8161 ctgaatcatc cggcaaacgg cgtggcctgg ctggcgaaca aactcgcacc gtatgacgta
     8221 caactggaag ccgggcaaat cattctcggt ggttcgttca cccgcccggt tccggcgcgt
     8281 aagggcgaca ccttccacgt cgattacggc aacatgggtt ccattagctg ccgctttgtt
     8341 taaggagaga acgatggaaa acagctttaa agcggcgctg aaagcaggcc gtccgcagat
     8401 cggattatgg ctggggctga gtagcagcta cagcgcagag ttactggccg gagcaggatt
     8461 cgactggttg ttgatcgacg gtgagcacgc gccgaataac gtgcaaaccg tgctcaccca
     8521 gctacaggcg attgcgccct accccagcca gccggtagta cgtccgtcgt ggaacgatcc
     8581 ggtgcaaatc aaacaactgc tggacgtcgg cacacaaacc ttgctggtgc cgatggtaca
     8641 aaacgctgac gaagcccgtg aagcggtacg cgccacccgt tatccccccg ccggtattcg
     8701 cggtgtgggc agtgcgctgg cccgcgcctc gcgctggaat cgtattcctg attacctgca
     8761 aaaagccaac gatcaaatgt gcgtgctggt gcagatcgaa acgcgtgagg caatgaagaa
     8821 cttaccgcag attctggacg tggaaggcgt cgacggcgtg tttatcggcc cggcggatct
     8881 gagcgccgat atgggttatg ccggtaatcc gcagcacccg gaagtacagg ccgccattga
     8941 gcaggcgatc gtgcagatcc gtgaatcggg caaagcgccg gggatcctga tcgccaatga
     9001 gcaactggca aaacgctatc tggaactggg cgcgctgttt gtcgccgtcg gcgttgacac
     9061 caccctgctc gcccgcgccg ctgaagcgct ggcagcacgg tttggtgcgc aggccaccgc
     9121 cgtgaagccc ggcgtgtatt aatgccggat gcgctgcact tatccggcct acactcgcac
     9181 caaaccgtag gccggataag gcgtttacgc cgcatccggc aaaaagccgt accaaatcgc
     9241 ggaccggata aggcgttacg ccgcatccgc cataaacctt gtcgtaccct acaaaaatcc
     9301 cattagagga agaaaaatga gcgacacctc acctgccata ccggagagta tcgatccggc
     9361 gaatcagcat aaagcgctga ctgccggaca acaggcggtt attaagaagc tatttcgccg
     9421 cctgatcgtc tttctgttcg tgctgtttat cttctcgttc cttgatcgca tcaacatcgg
     9481 ctttgccgga ctcacgatgg gacgcgacct cggtctgagc gccaccatgt ttggcctcgc
     9541 taccaccctg ttctatgccg cttatgtcat cttcggcatt cccagcaaca ttatgctgag
     9601 tattgtcggt gcgcggcgct ggatcgccac catcatggtg ctctggggca tcgcctctac
     9661 tgccaccatg tttgccactg gccccaccag cttgtacgta ctgcgtatac tggttggcat
     9721 taccgaagcc ggctttctgc ctggtattct gctgtattta accttctggt ttccggccta
     9781 tttccgcgcc cgtgccaacg ccttgtttat ggtagcaatg ccggtaacga cagcgttggg
     9841 ctcgatcgtt tccggctaca ttttgtcgct ggatggcgtc atggcattaa aaggctggca
     9901 gtggctgttt ttgctggaag gcttcccgtc ggtattactc ggcgtcatgg tgtggttctg
     9961 gcttgatgac tcaccggaca aagctaagtg gctgacgaaa gaagacaaaa aatgcctgca
    10021 agagatgatg gataacgatc gtctgacgct ggttcagcca gagggagcca tcagccacca
    10081 cgccatgcaa caacgcagta tgtggcggga gatcttcact ccggtggtga tgatgtatac
    10141 cctggcgtat ttctgcctga ccaacacact tagtgcgatc agcatctgga caccgcagat
    10201 cctgcaaagt tttaatcagg gcagcagtaa tatcaccatc ggcctgctgg ccgccgtacc
    10261 gcagatttgt accattctcg ggatggtcta ctggagccgt cactcagatc gccgccagga
    10321 acgaaggcat cacaccgccc ttccttattt gttcgctgcc gcaggttggt tactggcttc
    10381 ggcaactgat cacaacatga tccagatgct ggggatcatt atggcttcga ccggatcatt
    10441 cagcgcaatg gcgattttct ggacaacacc ggatcagtcc atcagcctgc gggcacgagc
    10501 gatcggtatt gcggtgatca acgccactgg caacattggt tcagcgttaa gtccgtttat
    10561 gatcggctgg ttgaaagatt tgaccggcag ctttaacagt ggattgtggt ttgttgccgc
    10621 gctgctggtg attggtgcgg ggattatctg ggcgattcca atgcagtcct cccgtccgcg
    10681 agcgaccccg taaggaacga cgatgtgtga ccgtcagatt gccaatattg atatcagcaa
    10741 agagtacgat gaaagcctgg gcacggacga tgtgcattat cagtcgttcg cccgcatggc
    10801 ggcatttttt ggccgccata tgctgccaca tcgccacgaa cagtactttc agatgcattt
    10861 cctcaatagc ggacagattg agctacagct tgacgatcat cgctactcgg tggaagcgcc
    10921 cctgtttgtc ctgacgccgc cgtcagtacc tcatgcgttt attacggagt ctgacgccga
    10981 cggtcatgtg ttgacggtac gggaagatct gatctggccc ctgctggaag ttctttatcc
    11041 gggcactcgg gaaaccttcg gcctgccggg ggcctgtcac tggcagataa acccgacgaa
    11101 ctggcggcgc tggaacacta ttggcaactg atagagcggg aatcggtgga acaactgcct
    11161 ggacgggaac acaccctgac gttactggca caggcagtgt tcaccctact gctgcgtaac
    11221 gcaaaactcg acgaccatgc cgccagcggg atgcgcggag aattaaaact gttccagcgt
    11281 tttaatatgc tgattgaaag ccattttcat cagcactgga cagtaccgga ttacgctaac
    11341 gaactgcata tcaccgaatc acgactcacg gacatctgcc gtcgctttgc caaccgtccg
    11401 ccaaaacggt tgattttcga caggcagctg cgagaagcca agcggctgct gctgttttct
    11461 gataacgccg tgaacaatat tgcctggcaa ctcggtttta aggatccggc ttattttgcg
    11521 cgctttttta atcgcttagt cggttgctcg cccagtgctt atcgcgccaa aaaagtacct
    11581 gtgacgtgaa aatcccttag ccttaacggg aaaccaggca ccacctgcta ttcccctttc
    11641 tccgcctgga gcaaggggat ttagtaacgt caaaaatcgc taaaagcgac ctcgatcaca
    11701 aaaccgtacc cgacctgaaa agtaccagcc attgtcccaa aagtctcttc ccgtaatcgc
    11761 ccctgcaagc tttaattgaa taacaaaaac aacacacaaa attaacaatc gtattccgat
    11821 taatactgta gaggtcgaca tgaaaccaga agatttccgc gccagtaccc aacgtccgtt
    11881 caccggggaa gagtatctga aaagcctgca ggatggtcgc gagatctata tctatggcga
    11941 gcgagtgaaa gacgtcacta ctcatccggc atttcgtaat gcggcagcgt ctgttgccca
    12001 actgtacgac gcgctacaca aaccggagat gcaggactct ctgtgctgga acaccgacac
    12061 cggcagcggc ggctataccc ataaattctt ccgcgtggcg aaaagtgcca acgacctgcg
    12121 ccagcaacgc gatgccatcg ctgagtggtc acgcctgagc tatggctgga tgggccgtac
    12181 cccagactac aaagctgctt tcggttgcgc actgggcgcg aatccgggct tttacggtca
    12241 gttcgagcag aacgcccgta actggtacac ccgtattcag gaaactggcc tctactttaa
    12301 ccacgcgatt gttaacccac cgatcgatcg tcatttgccg accgataaag taaaagacgt
    12361 ttacatcaag ctggaaaaag agactgacgc cgggattatc gtcagcggtg cgaaagtggt
    12421 tgccaccaac tcggcgctga ctcactacaa catgattggc ttcggctcgg cacaagtgat
    12481 gggcgaaaac ccggacttcg cactgatgtt cgttgcgcca atggatgccg atggcgtaaa
    12541 attaatctct cgcgcctctt atgagatggt cgcgggtgct accggctcgc catacgacta
    12601 cccgctctcc agccgcttcg atgagaacga tgcgattctg gtgatggata acgtgctgat
    12661 cccatgggaa aacgtactga tctaccgcga tttcgatcgc tgccgtcgct ggacaatgga
    12721 aggcggtttt gcccgtatgt atccgctgca agcctgtgtg cgcctggcag tgaaattaga
    12781 cttcattaca gcactgctga aaaaatcact cgaatgtacc ggcaccctgg agttccgtgg
    12841 tgtacaggcc gatctcggtg aagtggtggc gtggcgcaac accttctggg cattgagtga
    12901 ctcgatgtgt tctgaagcga cgccgtgggt caacggggct tatttaccgg atcatgccgc
    12961 actgcaaacc tatcgcgtac tggcaccaat ggcctacgcg aagatcaaaa acattatcga
    13021 acgcaacgtt accagtggcc tgatctatct cccttccagt gcccgtgacc tgaacaatcc
    13081 gcagatcgac cagtatctgg cgaagtatgt gcgcggttcg aatggtatgg atcacgtcca
    13141 gcacatcaag atcctcaaac tgatgtggga cgccattggc agcgagtttg gtggtcgcca
    13201 cgaactgtat gaaatcaact actccggtag ccaggatgag attcgcctgc agtgtctgcg
    13261 ccaggcacaa agctccggca atatggacaa gatgatggcg atggttgatc gctgcctgtc
    13321 ggaatacgac cagaacggct ggactgtgcc gcacttgcac aacaacgacg atatcaacat
    13381 gctggataag ctgctgaaat aacgcagcag gaggttaaga tgcaattaga tgaacagcgc
    13441 ctgcgctttc gtgacgcgat ggccagcctg tcggcagcgg taaatattat caccaccgag
    13501 ggcgacgccg gacaatgcgg gattacggca acggccgtct gctcggtcac ggatacacca
    13561 ccatcgctga tggtgtgcat taacgccaac agtgcgatga acccggtttt tcagggcaac
    13621 ggtaagttgt gcgtcaacgt cctcaaccat gagcaggaac tgatggcacg ccacttcgcg
    13681 ggcatgacag gcatggcgat ggaagagcgt tttagcctct catgctggca aaaaggtccg
    13741 ctggcgcagc cggtgctgaa aggttcgctg gccagtcttg aaggtgagat ccgcgatgtg
    13801 caggcaattg gcacacatct ggtgtatctg gtggagatta aaaacatcat cctcagtgca
    13861 gaaggtcacg gacttatcta ctttaaacgc cgtttccatc cagtgatgct ggaaatggaa
    13921 gctgcgattt aagctccagc cccttcacgt attcgtcgaa ggggcatttt tattgtgatc
    13981 tcaatcacat atccacccga tgaataattc ttgcccaacc gctcaccgcc attcctgacc
    14041 gcttacgtcc ctaaaataac cactcagtta tttaccttac tttacgcgcg cgtaactctg
    14101 gcaacatcac tgcaggatag cggtcaattt acctcctcaa acgcaacgca aacctagaac
    14161 ggcttcggcc tatgattaac aaattactct atgaattttg gtttgcagga aggcagcaag
    14221 tgagtgaatc cccgggagct tacaacagta agtgacagag gtgaacgaac gcagctgccg
    14281 cacctgtaag ccaaaagacg acgagtaaaa tgccaggttt tactatggat acgaaaaaac
    14341 tattcaagca cataccctgg gtgattctcg gaatcatcgg tgcattctgc ctcgcggtag
    14401 ttgcattacg tcggggggag cacgtcagcg ccctgtggat cgtggtcgcc tctgtgtcgg
    14461 tgtatctggt ggcgtatcgc tactacagtc tgtacatcgc ccagaaggtg atgaaactcg
    14521 accccacgcg cgcgacgcct gcggttatta acaacgacgg tctgaactac gttccgacca
    14581 accgttacgt gttgtttggt caccacttcg ccgctatcgc cggtgccggt ccgctggttg
    14641 gtccggtgct cgccgcgcag atgggctacc tgcctggcac gctgtggctg ctggcggggg
    14701 tagtactggc cggtgcggtt caggacttta tggtgctgtt tatctcctct cgccgtaacg
    14761 gcgcatctct cggtgagatg atcaaagaag agatgggacc agtaccgggg actatcgcgc
    14821 tgtttggctg tttcttaatc atgatcatca tcctcgccgt tctggcgctg attgtggtta
    14881 aagccctggc cgaaagtccg tggggtgtct tcaccgtttg ctcaaccgta ccgattgcgc
    14941 tgtttatggg tatctacatg cgctttatcc gtccggggcg tgtaggtgaa gtttctgtta
    15001 ttggtatcgt gctgctggtt gcctctatct atttcggtgg cgtgattgct cacgatccgt
    15061 actggggtcc ggcactgacc tttaaagaca ccaccattac cttcgcgctg attggctatg
    15121 cgtttgtttc cgcactgctg ccggtgtggc tgatcctcgc accgcgcgac tatctggcaa
    15181 ccttcctgaa aatcggcgtt atcgtcggcc tggcgctggg tatcgtggta ctgaacccgg
    15241 aactgaaaat gcctgcaatg acccagtaca ttgacggtac tggcccgctg tggaaaggcg
    15301 ctctgttccc gttcctgttc atcaccatcg cctgtggtgc ggtatctggc ttccacgcgc
    15361 tgatctcttc cggtacgacg ccgaaattgc tggctaacga aaccgacgcg cgtttcattg
    15421 gctacggcgc aatgctgatg gaatccttcg tggcgattat ggcgctggtt gctgcgtcca
    15481 tcatcgaacc gggtctttac ttcgcgatga ataccccgcc tgctggcctt ggcatcacca
    15541 tgcctaacct gcatgaaatg ggtggcgaga acgcgccgat catcatggcg cagctgaaag
    15601 acgttaccgc acacgcggcg gcgaccgtca gctcctgggg cttcgtgatt tcgccagagc
    15661 agatcctgca aaccgcgaaa gacattggtg agccttctgt cctgaaccgt gcaggtggcg
    15721 cgccgacgct ggcggtaggt atcgctcacg tgttccacaa agtgctgccg atggctgaca
    15781 tgggcttctg gtatcacttc ggtattctgt tcgaagccct gttcatcctg accgcgctgg
    15841 atgcgggtac tcgttctggc cgctttatgc tgcaagacct gctgggtaac ttcatcccgt
    15901 tcctgaaaaa aaccgactct ctggttgccg gtatcatcgg tactgcgggc tgtgtgggtc
    15961 tgtggggcta cctgctgtat cagggcgtgg tcgatccgct gggcggcgtt aagagcctgt
    16021 ggccgctgtt cggtatttcc aaccagatgc tggcagccgt agcgctggta ctgggcaccg
    16081 ttgtgctgat taagatgaag cgcacccaat acatctgggt aactgttgtt ccggctgtat
    16141 ggctgcttat ctgcaccacc tgggcgctgg gtctgaaact gttcagcacc aacccgcaga
    16201 tggaaggctt cttctacatg gcaagccagt acaaagagaa gattgctaac ggtactgacc
    16261 tgacggcgca gcagattgcc aacatgaacc acatcgttgt gaacaactac accaacgcag
    16321 gcctgagtat tctgttcctg attgtggtgt acagcatcat cttctacggt ttcaaaacct
    16381 ggcttgcggt gcgtaacagc gacaaacgta ctgacaaaga aactccgtac gttccaatcc
    16441 cggaaggcgg cgtgaagatc tcttcgcacc actaaccggt tgccggatgc gctgcgcgta
    16501 tccggcctac aaagtgtcta tcgtaggccg gataaggcgt ttacgccgca tccggcaaat
    16561 ccctagcccg gaccttccgg gctttacgca tatctggaag gcaaaatgtt tggtaactta
    16621 ggacaggcaa aaaaatatct cggccaggcg gcgaagatgt tgattggcat tccagactac
    16681 gacaactacg tcgagcatat gaagaccaac catcccgaca agccgtacat gagctatgaa
    16741 gaattcttcc gcgaacgcca gaacgcgcgc tacggcggcg atggtaaagg cggtatgcgc
    16801 tgttgttaat ggagagagca tgaacccgat tgcagttacc ctactcaccg gttttttagg
    16861 cgcgggcaaa accaccctgc tgcgccatat tcttaacgaa caacacggct acaagattgc
    16921 cgtgattgaa aacgaattcg gcgaagtctc cgttgatgat caactgattg gcgaccgcgc
    16981 cacgcagatc aaaacgctga ccaacggctg catctgctgt tcgcgctcca acgagctgga
    17041 agacgcacta ctcgacctgc tggataatct cgacaagggc aatattcagt tcgaccgtct
    17101 ggtcattgaa tgcaccggca tggccgatcc cggcccgatt attcagacct tcttctccca
    17161 tgagatttta tgccagcgct acctgctgga cggggtgatt gcgctggtgg atgcggtaca
    17221 tgccgatgag cagatgaacc agttcaccat cgcccagtcc caggttggct acgccgaccg
    17281 tattctgctg acgaaaaccg acgtcgcagg cgaagcagag aaactgcgtg aacgcctggc
    17341 gcgcatcaac gcccgcgcac cggtctacac cgttacccac ggcgatatcg acctgggcct
    17401 tctgttcaac accaacggtt ttatgctgga agaaaacgtc gtcagcacca aaccgcgttt
    17461 ccactttatc gcggacaaac aaaacgatat ttcgtcgatt gtggtggaac tggattaccc
    17521 ggtagatatc agcgaagttt cccgggtgat ggaaaacctg ctgctggaat cggcggataa
    17581 actgctgcgt tacaaaggga tgctgtggat tgacggcgaa cctaaccgcc tgctgttcca
    17641 gggcgtccag cgcctctaca gcgccgactg ggaccgcccg tggggcgatg aaaaaccgca
    17701 tagcacgatg gtgtttatcg ggattcagtt gccggaggat gagattcggg cggcgtttgc
    17761 gggactcaaa aagtaaccag ccctccaaca tcacaatacc tgagacttta tcaccctcat
    17821 attcctccag aatatgaggg cattcgggct taattatctc tgaacgtgca acacttccta
    17881 cgactcctta tgcgcctcca catcctgctt cgttaaccag agcgacttac gaccaaaatt
    17941 ttcgtacatt ttcagctgat cttcatagtg ctgatcaact gttccatcgg gagcaataaa
    18001 cccactctga ccgggtgcga ccacatccca ggcaagcacc ggacgatcgc ttgtcgttgg
    18061 tgagaaaaca atcatatcgt tttctgttcc acggttttga tactccgcct gatgacgcgt
    18121 ttcttccgct gcggcctgcg gtacatcaaa gaaattattt gcccggaacg ttaaggccat
    18181 tgcaggtgtt ttccagttac tcacattatt gccatagcgt ttggaaagag tctcccaggt
    18241 atcttccagc gcagccaaca caacctcctg ctgtggtttc ccagcaaaca gatcaaccgc
    18301 ctgtgggatt ggtgatttgt ctccctgcac cgcctcatac aaaatttttg ctccaacact
    18361 tatattcagc gaaccagttg ggccgtcctg ggttgtttcg tagccactgg cgctgtacca
    18421 cttatcaaat ggcataggta cggcagccac tacggtacgc ttcaacatac tggtcagcca
    18481 aacgttcagg atggcagagc ctggct
//
LOCUS       DADKRT010000079        18257 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.080, whole genome shotgun sequence.
ACCESSION   DADKRT010000079 DADKRT010000000
VERSION     DADKRT010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18257
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.080"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..207
                     /locus_tag="JQ356_002246"
     CDS             <1..207
                     /locus_tag="JQ356_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
                     /protein_id="HAY4622325.1"
                     /translation="PIPDNRGNITLRLDDHIQSVQGKESYEDEMFSIRYFKKGSAHIT
                     FRKPELVDRLNDIIAKHYPDMLAV"
     gene            complement(357..444)
                     /locus_tag="JQ356_002247"
     tRNA            complement(357..444)
                     /locus_tag="JQ356_002247"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(408..410),aa:Ser,seq:gga)
     gene            complement(698..916)
                     /gene="infA"
                     /locus_tag="JQ356_002248"
     CDS             complement(698..916)
                     /gene="infA"
                     /locus_tag="JQ356_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HAY4622326.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(1201..1905)
                     /gene="aat"
                     /locus_tag="JQ356_002249"
     CDS             complement(1201..1905)
                     /gene="aat"
                     /locus_tag="JQ356_002249"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HAY4622327.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
                     GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC
                     ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
                     RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
                     LPNNFWVPRCLFSPQE"
     gene            complement(1947..3668)
                     /gene="cydC"
                     /locus_tag="JQ356_002250"
     CDS             complement(1947..3668)
                     /gene="cydC"
                     /locus_tag="JQ356_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HAY4622328.1"
                     /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
                     ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMMVTIGLSFLDF
                     TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
                     SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVA
                     DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAESL
                     RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT
                     TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
                     YQFKQGL"
     gene            complement(3669..5435)
                     /gene="cydD"
                     /locus_tag="JQ356_002251"
     CDS             complement(3669..5435)
                     /gene="cydD"
                     /locus_tag="JQ356_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HAY4622329.1"
                     /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
                     MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
                     SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
                     DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
                     PQCGEVELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
                     LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
                     SEHELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL
                     LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
                     YAELSVAGGPFATLLAHRQEEI"
     gene            complement(5558..6523)
                     /gene="trxB"
                     /locus_tag="JQ356_002252"
     CDS             complement(5558..6523)
                     /gene="trxB"
                     /locus_tag="JQ356_002252"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HAY4622330.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
                     TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
     gene            7068..7562
                     /gene="lrp"
                     /locus_tag="JQ356_002253"
     CDS             7068..7562
                     /gene="lrp"
                     /locus_tag="JQ356_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HAY4622331.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            7697..11725
                     /gene="ftsK"
                     /locus_tag="JQ356_002254"
     CDS             7697..11725
                     /gene="ftsK"
                     /locus_tag="JQ356_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HAY4622332.1"
                     /translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
                     SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE
                     DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEE
                     EIIYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA
                     APVEPVTQTPPVTSVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQ
                     YNEPLQQPVQPQQPYYAPAAEQPVQQPYYAPAAEQPVQQPYYATAPEQPAQQPYYAPA
                     PEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV
                     VEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSAAAVP
                     PVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKR
                     IRVPTRRELASYGIKLPSQRAAEEKAREARRNQYDSGDQYNDDEIDAMQQDELARQFA
                     QTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDF
                     EFSPMKALLDDGPHEPLFTPIVEPVQQPQQLVAPQQQYQQPQQQVAPQQQYQQPQQPV
                     APQPQYQQPQQQVAPQPQYQQPQQPVAPQQQDTLLHPLLMRNGDSRPLHKPTTPLPSL
                     DLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGV
                     KAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRD
                     NPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDV
                     RFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNL
                     AGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKK
                     VEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILD
                     QAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSD
                     SESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEA
                     QGIVSEQGHNGNREVLAPPPFD"
     gene            11880..12491
                     /gene="lolA"
                     /locus_tag="JQ356_002255"
     CDS             11880..12491
                     /gene="lolA"
                     /locus_tag="JQ356_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HAY4622333.1"
                     /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ
                     FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
     gene            12502..13845
                     /locus_tag="JQ356_002256"
     CDS             12502..13845
                     /locus_tag="JQ356_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HAY4622334.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
                     QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
                     HDEANAYAAGEVYFPREIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
     gene            13936..15228
                     /gene="serS"
                     /locus_tag="JQ356_002257"
     CDS             13936..15228
                     /gene="serS"
                     /locus_tag="JQ356_002257"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HAY4622335.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
                     ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
                     HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            15467..17911
                     /gene="dmsA"
                     /locus_tag="JQ356_002258"
                     /pseudo
     CDS             15467..17911
                     /gene="dmsA"
                     /locus_tag="JQ356_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415414.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
     gene            17922..>18257
                     /locus_tag="JQ356_002259"
     CDS             17922..>18257
                     /locus_tag="JQ356_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
                     /protein_id="HAY4622336.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYG"
BASE COUNT         4651 a         4618 c         4811 g         4177 t
ORIGIN      
        1 ccaatccccg acaaccgggg aaacatcacc cttcgtctgg atgatcacat tcagtctgtt
       61 cagggtaaag agagctatga agatgagatg ttcagcatca gatactttaa gaagggctcc
      121 gcgcatatca cgttcagaaa accagaactg gttgacagac tgaatgatat tatcgcaaaa
      181 cactatcctg atatgctggc agtatagctt tgccagtatg ctcaaagatc ggaaattgtc
      241 cgataagata tgatcgcggg gcatataaac cggtttcaga tggcataccc gatggcatac
      301 tgtctggaag gaaaaataaa aaaacgcatg ttaaacaata acatgcactt ataatctggc
      361 ggtgaggggg ggattcgaac ccccgatacg ttgccgtata cacactttcc aggcgtgctc
      421 cttcagccac tcggacacct caccaaattg ttttgctacc aaacctcatg ggtggcaacg
      481 gggcgctact atagggagtt ggagtaaaac ggtcaagaag aattttaatg ataattattg
      541 tttgctcata ctgtaaacaa gttgtgcagt atatctacat cgagacaagt tacggactta
      601 tacttccaaa gtacttcata catatcacaa aataaaaagg ccggttaaac cgacctttta
      661 ctcgttcttt ctcttcgccc atcaggcggt aaaacaatca gcgactacgg aagacaatgc
      721 ggcctttgct caggtcgtac ggggtcagtt caacagtcac tttgtcgccc gtcaggatgc
      781 ggatgtagtt tttgcgcatt ttaccggaga tgtgtgcagt aaccacgtga ccgttttcta
      841 actctacgcg gaacatggta ttaggcaacg tttcaagaac ggtaccttgc atttcaatat
      901 tgtcttcttt ggccatctaa tcctctgggg tatcactacc gtaatttgaa ccggcaagat
      961 aatgccgaag ttctgtaaat aagtaaagat ttgcgcgcta aatcgcaaca aacaggttcg
     1021 gcacattact ccgaaaacac acggctaagc cgcaccaaaa gcgcaacgta taagggagcg
     1081 gtgagataaa cgatgggcgt tacctgacgc gaaaaattcc ttatcggcag cggggtaatg
     1141 agcgtaacca actctgcgac cgcaattata acactctggg gagaaatgtg ccgaaaacat
     1201 tcattcttgt ggtgaaaaca agcatcgtgg tacccagaaa ttattcggca atcgtccgag
     1261 gcgcatttga ttgagataat taaggtaatc ccggcgggga atttcgcagg caccaagcga
     1321 tgctgtgtga tcgttaagga cctggcagtc gataagctta ccgccatgac cgataaattc
     1381 ctcacagaat accagaagcg ccgttttaga cgcattttcc atccggctga acatggactc
     1441 gccacaaaat agcgttccct gggccacgcc gtacataccg ccgacaagct catcttcacg
     1501 ccagacttca atggagtggg catggccgag ttcgtgaagg cgatggtagg cttcgaccac
     1561 gccacgcgtg atccaggttc cttcttcgcg atcgctggca cagccttcaa tgacctgacc
     1621 aaaagcgtaa ttcatcgtga cacgataggg cgagcgttta tgaaatcgct tcatactacg
     1681 gctgatatgc agtgattctg gccatagcac cgcgcgggga tcgggcgacc accagaggat
     1741 ggggtcgcct ggagaaaacc acggaaaaat accacgctgg taagccatta acaggcgcgc
     1801 agggctaaga tcgcccccaa gtgccagcag gccgttaggc tcacgtaatg cgccttccgg
     1861 ggaagggaag gctattgaat ggcgagaaag ctgaaccagg cgcatgaccg caaaactcca
     1921 cgcaagtcgg atcgttcaat aatagcttac aaaccctgct tgaactggta ataacgcccc
     1981 tgtctggcaa gcagctctgc gtgagtacct tgctcaataa tttgcccgtt gtccatcact
     2041 attatttgtt ggaaacgaga gagtccgcga agtcgatggg tgaccattaa caccgttttc
     2101 tcacgcatca tttctgcaag caattcaagg atctggcttt cggttgtggc atctaagcct
     2161 tcggtaggtt catccagcaa caccagtggc gcatcatgta acagcgcacg ggcgatagcc
     2221 agacggcgca gttcaccacc ggagagctgg cgtccgcctt cacctaacca actgttgaga
     2281 cctgcatcct cgagcagctt ctccagacca acgcgacgca agctctccgc cagagcctca
     2341 tcactactgc caggcgaggc gagtaacaga ttatcacgca gcgtggcgct aaacagatgc
     2401 actcgctgag gaacaacgct gatggtctgt cgtagagccg cttcattcag gctggctatg
     2461 gggctatcgt taagcaaaat ctcgccctgt tgcgggtccc aagcgcgggt cagcagttgt
     2521 aacagtgttg atttgccgca tccggttcgc ccgagaatcg caatatgttc cccggcgttt
     2581 acctgaagag aaatcccttt aagtgcctgt tgggattgct ccggataagt gaactgaaca
     2641 tcccgtaatg tcagcgaaac gcgatcggca acacgagttt gggtatcagg gaaggtgact
     2701 tccggttttt gatccgttaa atcagtgatc cgaacggcag aggcaatgac ttgccccaga
     2761 tgctgaaatg cacccgttac tggtgccagt gcttcaaacg cggctaacgc gcagaagaca
     2821 aacagggcaa ttaacgcgcc gggttgagca ttgccgccaa cgccgccaga cgccatccac
     2881 agcatcagga tcaccgctaa cgcgccaatg agcagcatta tcgcttgcga caatgcggtc
     2941 agttcagatt gacggcgttg cgcttccagc cattgaattt ctgtattctc tagttgcgtg
     3001 cgataacgat cgctggcacc aaaaatggtc agctcagctt gcccttgcag ccaggccgtc
     3061 agttgttggc gatactgtcc gcgaagatga gtcagatttt gcccggtgct ttttcccgca
     3121 cgataaaaca gcggtggcat caggaaaagc gtcagtaaca taatgccgcc cagcgtaaag
     3181 gcgagggtga aatcaaggaa acttaacccg attgtcacca tcataatcac cacaaaagcg
     3241 cccaccagcg gcgagataac gcgcaggtaa agatgatcga gcgtatcaac atccgccacc
     3301 acgcgattga gcaattcgcc ctgacgatag cgcgccagtc cggcagggga gaggggcaac
     3361 aatttgctga aggtgtaaat gcgcagatgc tgcaacacgc ggaaagtcgc gtcgtgactt
     3421 accagacgtt caaaataacg cccggcagta cgggtgattg cggcaccacg cacgcccgca
     3481 gcgggtagca tatagttgaa gctgtacagt ccggcaaccc ccgcaaccgc tgaggccgag
     3541 aggaaccagc cggaaagtgt caacagtccg atactggcga gcagcgtcac aattgccagc
     3601 acaataccaa gacttaacat ccatttatga cgtttataca gtgctagata gggtagcaaa
     3661 gcgcgcattt aaatctcctc ctgacgatgg gccagtaatg tggcgaatgg gccaccagcc
     3721 acacttaatt ccgcgtaacg tccttgctca ataatccggc catcctgcat aacccaaatg
     3781 acatcccagt cagcaagatc ttctaactgg tgggtgacca ttaacgttgt ctggcgcaga
     3841 gaggcggcat tcagcgcctc cattacgcgc tgttcactgt gagcatcaag gctggcagcg
     3901 ggttcatcca acagtaatag cgaacaggga tttagtaacg cacgggccac cgccacgcgc
     3961 tgcgcctgcc ccacggaaag gcgggcagcc tggtcgccaa caggcgtatc aacgccttgt
     4021 ggcaggagcg gtagaaactc gctgacccag gcgttatcca gcgctgcttg taattcatgt
     4081 tcgctggcat caggtcgcgc cagtagtacg ttatcccgta atgttgctgc cggtaattgt
     4141 ggattttgcc caacccagga gagatgttta cgccatgatt ctggtgataa atcgcgtaat
     4201 tctatcccgt tgattcgtag cgatccctga tatgagagaa aaccagaaag cgcgttcaac
     4261 agtgaacttt tacctgaacc gctgcgacca accaacacgg cacgttggcc tgctggcaaa
     4321 gtaaagttca gcggtccggc cagcgtttta ccttccggcg acgtgataaa cagatcctcg
     4381 gcctcaatgg tcaccggatc ggtcgatgct aattccacct cgccacactg cggatgggcg
     4441 agcggggttt ccataaacgt tttcagactg tcagctgcac caacagcctg ggctttagca
     4501 tgataaaacg taccgagatc gcgtaatggc tggaaaaact ctggcgcaag gatcagggcc
     4561 agaaaacccg cagccagcgt cacgccagta tcgtagtgac caaaatccag ctcgccaaga
     4621 taggaaaaac caaagtagac cgccaccaga gcaattgaca gcgaggtaaa aaattcgaga
     4681 atgccggagg ataaaaatgc cagccgtagc acttccattg tccgttggcg gaaatcttcc
     4741 gaagcagaac gaatactttc aatttcagct tcaccacgac caaaaatacg caatgtttcc
     4801 atgccgcgca ggcgatcgag gaaatgccca cttaagcgag caagagcgag aaagttacgt
     4861 cggttagcat cggcagcccc cattccaacc agcgccataa acaacggaat taacggtgca
     4921 gtgcccagca gaatgagcgc cgcagcccag tttgagggga agattgccac cacaatcagc
     4981 aacggcaccg acactgccag cgccatttgc ggcaggtagc gtgcatagta atcatgcata
     5041 tcgtcaattt gctcgagtac cagcgtcgcc cagctccccg caggtttacc ctgaatccac
     5101 gctggccctg cttgttgcag acggtcgaga acctgccggc ggatggcaaa gcggatatgc
     5161 tgcccggcgt gataacccac ccgttcgcgt aaccagacca cccatgcgcg cagtacaaag
     5221 gtcagaacca gtaacgtaaa gggaagcagc agggcttcac ggggaatatt ctccataatc
     5281 atatgttgca gaattcgcgc catgaaccag gcctgggcaa tgatcaatat gccgctcaca
     5341 aagcccagca gacgagaaat attcagccaa cgttgggaga tgacgctttg ctgttttaac
     5401 cagcgggtta actctttttg acgagattta ttcattgcac gcttagcagg tgagttatca
     5461 gaattatttg cagagcaatg ttacaacggg gaaaaaataa aggcgaccca tagtcgcaag
     5521 gtgtcgcctt ctttactttt gttactgatt tgtaaaatta ttttgcgtca gctaaaccat
     5581 cgaggtagcg ttccgcatca agtgctgcca tgcagcctgt accggccgaa gtaatggcct
     5641 gacgataaat atgatccatc acgtcacccg cggcaaagac gccaggaatg ctggtctggg
     5701 tggcattacc atgaataccc gactgtactt tgatgtagcc gttttccagt tccagctgcc
     5761 cttcgaaaat ggcagtattc gggctgtgac cgatagcaac aaacagaccg gcaacgtcga
     5821 gtgattcgat gttatcgctg ttttgcgtat cgcgcagacg aacgccagtg acacccattt
     5881 gatcgccggt cacttcttcc agcgtccggt tggtgtgcag aatgatgttg ccgttctcca
     5941 ctttatccat cagacgctta atgaggattt tttccgcgcg gaaaccgtca cggcggtgaa
     6001 tcagatgtac ttccgaagcg atgttagaca gatacaacgc ctcttcaacc gcggtattgc
     6061 cgccgccgat gaccgcaact ttctggttgc gatagaagaa accgtcgcag gttgcacaag
     6121 cagaaacccc acggccttta aaggcttctt cagagggcag gccgagatag cgtgcagaag
     6181 ctccggtggc aataatcagc gcgtcgcaag tgtattcgcc gttatcgcca ttcagacgga
     6241 acggacggtt ttgcagatcc accttgttga tatgatcaaa aatgatttca gtttcaaatt
     6301 tggtggcatg ttcgtgcatg cgctccatta ataacggacc ggtcagatcg tttggatcgc
     6361 caggccagtt ttccacttct gtggtggtgg tcagttggcc gcctttttcc atgccggtaa
     6421 tcagcacagg ttgcaggttg gcgcgcgccg catagacagc agcggtgtat cccgccgggc
     6481 ctgaacccag gataagcagt ttactgtgtt tggtcgtgcc catgagatcc ccatagttgt
     6541 tggcagacaa tgggcaggat tgtagggaat ttactgacgt aaaaaaagag tatgacgatt
     6601 ttgttaacaa tttgtgcaat cggcagcatc gataagcagg tcaaattctc ccgtcattat
     6661 cacctctgct acttaaattt cccgctttat aagctgatta aatgatgaat aaacgcccct
     6721 gttaatgaat atctggcatg ttgtactaaa aatcgatgtt ttgctttgac aatcccctgg
     6781 tgttttgcga aaacattcga ggaagaaaaa aaacagtatt cttatatgcg cataaccatg
     6841 catgtaaata ccatgtttac cgtgctagtg aaatctacgt atggcgtgga cagacgccat
     6901 tcgtgatgtc gatagctgcc acaaggcaac ggtcttctca ccgtagaccc aggcattgcg
     6961 cgccgtgaat cttcatgatt tcggtctatc gtgacgggta gcgactctga acagtgatgt
     7021 ttcagggtca gacaggagta gggaaggaat acagagagac aataataatg gtagatagca
     7081 agaagcgccc tggcaaagat ctcgaccgta tcgatcgtaa cattcttaat gagttgcaaa
     7141 aggatgggcg tatttctaac gtcgagcttt ctaaacgtgt gggactttcc ccaacgccgt
     7201 gccttgagcg tgtgcgtcgg ctggaaagac aagggtttat tcagggctat acggcgctgc
     7261 ttaaccccca ttatctggat gcatcacttc tggtattcgt tgagattact ctgaatcgtg
     7321 gcgcaccgga tgtgtttgaa caattcaata ccgctgtaca aaaacttgaa gaaattcagg
     7381 agtgtcattt agtatctggt gatttcgact acctgttgaa aacacgcgtg ccggatatgt
     7441 cagcttaccg taagttgctg ggggaaaccc tgctgcgtct gcctggcgtc aatgacacac
     7501 ggacatacgt tgttatggaa gaagtcaagc agagtaatcg tctggttatt aagacgcgct
     7561 aacacggaac aggtgcaaaa tcggcgtatt ttgattacac tcctgttaat ccatacagca
     7621 acagtactgg ggtaacctgg tactgttgtc cgttttagca tcgggcagga aaagcctgta
     7681 acctggagag cctttcttga gccaggaata cactgaagac aaagaagtca cattgacaaa
     7741 gttaagtagc ggccgtcgcc ttctggaagc gttgctgatc cttattgtcc tgtttgccgt
     7801 ctggttgatg gctgccttac taagctttaa cccttcggac cccagctggt cgcaaacggc
     7861 ctggcatgaa cctatccata atttaggtgg gatgcccggt gcgtggctgg cagatacgct
     7921 gttctttatt tttggcgtga tggcttacac cattcccgtc attattgtcg gcggttgttg
     7981 gtttgcctgg cgtcatcagt ccagtgacga atacattgat tattttgccg tttcgttacg
     8041 catcattggc gttttggcgc tcatccttac ctcctgtggt ctggcggcaa tcaacgctga
     8101 cgatatctgg tattttgcct ccggtggcgt cattggcagc ttactaagca ctacgttaca
     8161 accactgcta cacagtagcg ggggaactat tgcgctgctc tgcgtttggg ctgcgggcct
     8221 gacgctgttc accggttggt catgggtgac cattgctgaa aaactcggcg gctggatttt
     8281 aaacattctc accttcgcca gtaatcgtac ccgtcgcgat gatacctggg tcgatgaaga
     8341 tgaatatgaa gatgacgaag agtatgaaga tgaaaaccac ggcaaacagc atgaatcacg
     8401 ccgtgcccgt attcttcgcg gcgcgctagc gcgtcgtaaa cggttggcgg aaaaattcat
     8461 taatccgatg gggcggcaaa cagacgctgc gttgttctcc ggtaagcgga tggatgatga
     8521 agaagagatt atctacactg cacgcggtgt ggctgccgac ccggacgacg tcctattttc
     8581 gggcaatcgt gcaacgcagc cagaatatga cgaatacgat ccattattaa acggtgcgcc
     8641 aattaccgaa cctgttgctg tagcagctgc tgctaccacg gcgacacaaa gctgggctgc
     8701 gccggttgaa cctgtgaccc agacgccgcc tgttacttct gttgatgttc caccttcgca
     8761 acctacagta gcctggcagc ctgtaccggg tccacaaacg ggagagccgg ttattgctcc
     8821 tgcaccggaa ggttacccac agcagccaca atatgcgcag cctgcagtgc aatataatga
     8881 gccgctgcaa caacctgtac agccacagca gccgtattat gcgcctgcag ctgaacaacc
     8941 tgtgcaacaa ccttactacg ctcctgcggc ggaacaacct gttcagcaac cgtattacgc
     9001 aactgcgccg gaacagcctg cgcaacagcc gtattatgcc cctgcgccag aacaaccggt
     9061 ggcaggtaac gcctggcaag ccgaagagca gcaatccact tttgctccac agtctacata
     9121 ccagactgag caaacttatc agcagccagc cgctcaggag ccgttgtacc aacagccgca
     9181 acccgttgaa cagcagcctg ttgtggagcc tgaacccgtt gtagaagaga caaaacccgc
     9241 gcgtccgccg ctttactatt ttgaagaagt ggaagagaag cgagcccgtg aacgtgaaca
     9301 acttgcggcc tggtatcaac cgattccaga accggttaaa gaaccagaac cgatcaaatc
     9361 ttcgttgaaa gcgccttctg ctgcagcagt acctccagta gaagccgctg ccgctgtttc
     9421 tccgctggca tctggcgtga aaaaagcgac actggcgacg ggggctgccg caaccgttgc
     9481 cgcgccagtc ttcagtctgg caaatagcgg tggaccgcgt ccgcaagtca aagagggaat
     9541 tggcccgcag ttgccacgac cgaaacgtat tcgcgtgcca actcgtcgtg aactggcgtc
     9601 ttacggtatt aagctgccct cacagcgtgc ggcggaagag aaagcccgtg aagcccggcg
     9661 caatcagtat gattctggcg atcagtataa cgatgatgaa atcgatgcga tgcagcagga
     9721 tgaactggca cgtcagttcg cccagacaca gcagcaacgc tatggcgaac agtatcaaca
     9781 tgatgtgccc gtaaacgcag aagatgcaga tgctgcggca gaggctgaac tggctcgtca
     9841 gtttgcgcaa actcaacaac aacgttattc cggcgaacaa ccggctgggg cgaatccgtt
     9901 ctcgctggat gattttgaat tttcgccaat gaaagcgttg ctggatgatg gtccacacga
     9961 accgttgttt acgccaattg ttgaacctgt acagcagccg caacaactgg ttgcaccgca
    10021 gcagcagtat cagcagccac aacagcaggt tgcgccacag cagcaatatc agcagccgca
    10081 acagccggtt gcgccgcagc cgcagtatca gcagccacaa cagcaggttg cgccgcagcc
    10141 acaatatcag cagccgcaac aaccggttgc accgcagcag caggataccc tgcttcatcc
    10201 gctgttgatg cgtaatggcg acagccgtcc gttgcataaa ccgacgacgc cgctgccttc
    10261 tctggatttg ctgacaccgc cgccgagcga agtggagccg gtagatacct ttgcgcttga
    10321 acaaatggct cgcctggtgg aagcgcgtct ggctgatttc cgtattaaag ccgatgtcgt
    10381 caattactct ccggggccgg ttatcactcg ctttgaactt aacctggctc ctggcgtaaa
    10441 agcggcgcgc atttctaact tgtcacggga ccttgcccgt tcactttcga cggtggcggt
    10501 gcgtgtcgtt gaagttattc ctggcaaacc ctatgtaggt ctggagttac caaataaaaa
    10561 acgacaaacc gtttatctgc gcgaagtttt ggataacgcc aaattccgcg ataatccgtc
    10621 gccattaacc gtggtgctgg gtaaagatat cgccggtgag ccggtggttg ccgatctggc
    10681 gaaaatgccg cacttgttgg ttgcggggac taccggttcc ggtaaatctg tcggtgtgaa
    10741 cgcgatgatc ctgagcatgc tttataaagc acagccagaa gatgtgcgtt tcatcatgat
    10801 cgacccgaaa atgctggagc tttcggttta tgaaggcatt ccgcatctgt taacggaagt
    10861 cgttactgat atgaaagatg ccgccaacgc gctgcgctgg tgtgttaacg agatggagcg
    10921 tcgttataaa ctgatgtctg cgctgggtgt gcgtaatctg gcgggttata acgaaaaaat
    10981 tgctgaagcc gatcgcatga tgcgtccgat tccagacccg tactggaagc cgggtgacag
    11041 tatggatgcc cagcatccgg tgctgaaaaa agaaccatac attgtggtgt tggttgacga
    11101 atttgccgac ctgatgatga cggtaggtaa aaaagtggaa gagctgatag cacgtctggc
    11161 gcaaaaagcc cgtgccgcgg gtatccacct cgtactggca actcagcgtc catcggttga
    11221 tgttattact ggtctgatta aagcgaatat tccgacccgt atcgccttta ccgtatccag
    11281 taagattgac tcacgtacca ttcttgatca ggctggcgcg gaatcactgc tggggatggg
    11341 ggatatgctc tactctgggc cgaactccac gttgccggta cgtgtccatg gtgcttttgt
    11401 tcgcgatcag gaagttcatg ccgtggtgca ggactggaaa gcgcgtggtc gcccacagta
    11461 tgttgatggc atcacttccg acagtgaaag cgaaggtggc gcgggcggtt tcgatggcgc
    11521 tgaagaactg gatccgttgt tcgatcaggc ggtgcagttt gtcactgaaa aacgcaaagc
    11581 gtcaatttct ggcgtacagc gtcagttccg cattggttat aaccgtgcag cgcgtattat
    11641 cgaacagatg gaagcgcagg ggattgtcag cgaacagggg cacaacggta atcgtgaagt
    11701 gctggcccca ccgccgtttg actaattaat gcattgccgg ataaggcgcg gtagcgtcgc
    11761 atccggcact ctatcaactg aaaattcagt attttctttt ttcctcaagc tgattattag
    11821 cctggaatag agagtagagg gaactcccga tcgggagtga cgtaatttga ggaataatga
    11881 tgaaaaaaat tgccatcacc tgtgcattac tctcaagctt agtagcaagc agcgtttggg
    11941 ctgatgccgc aagcgatctg aaaagccgcc tggataaagt cagcagcttc cacgccagct
    12001 tcacacaaaa agtgactgac ggtagcggtg cggcggtgca ggaaggtcag ggcgatctgt
    12061 gggtgaaacg tccaaactta ttcaactggc atatgacaca acctgatgaa agcattctgg
    12121 tttctgacgg taaaacactg tggttctata acccgttcgt tgagcaagct acggcaactt
    12181 ggctgaaaga tgccaccggt aatacgccgt ttatgctgat tgcccgcaac cagtccagcg
    12241 actggcagca gtacaatatc aaacagaatg gcgatgactt tgtcctgacg ccgaaagcca
    12301 gcaatggcaa tctgaagcag ttcaccatta acgtgggacg tgatggcaca atccatcagt
    12361 ttagcgcggt ggagcaggac gatcagcgca gcagttatca actgaaatcc cagcaaaatg
    12421 gggctgtgga tgcagcgaaa tttaccttca ccccgccgca aggcgtcacg gtagatgatc
    12481 aacgtaagta gaggcacctg agtgagcaat ctgtcgctcg atttttcgga taatactttt
    12541 caacctctgg ccgcgcgtat gcggccagaa aatttagcac agtatatcgg ccagcaacat
    12601 ttgctggctg cggggaagcc gttgccgcgc gctatcgaag ccgggcatct gcattctatg
    12661 atcctctggg ggccaccggg taccggcaaa acaactctcg ctgaagtgat tgcccgctat
    12721 gcgaacgctg atgtggaacg tatttctgcc gtcacctctg gcgtgaaaga gattcgcgag
    12781 gcgatcgagc gcgcccggca aaaccgcaat gcaggtcgcc gcactattct ttttgttgac
    12841 gaagttcacc gtttcaacaa aagccagcag gatgcatttc tgccacatat tgaagacggc
    12901 accatcactt ttattggcgc aaccactgaa aacccgtcgt ttgagcttaa ttcggcactg
    12961 ctttcccgtg cccgtgtcta tctgttgaaa tccctgagta cagaggatat tgagcaagta
    13021 ctaactcagg cgatggaaga caaaacccgt ggctatggtg gtcaggatat tgttctgcca
    13081 gatgaaacac gacgcgccat tgctgaactg gtgaatggcg acgcgcgccg ggcgttaaat
    13141 acgctggaaa tgatggcgga tatggccgaa gtcgatgata gcggtaagcg ggtcctgaag
    13201 cctgaattac tgaccgaaat cgcaggtgaa cgtagtgccc gctttgataa caaaggtgat
    13261 cgcttttacg atctcatttc cgcactgcat aaatcggtac gtggtagcgc acccgatgcg
    13321 gcgctgtact ggtatgcgcg aattattact gccggtggcg atccgttata tgttgcgcgt
    13381 cgctgtctgg cgattgcgtc tgaagatgtg ggtaatgctg atccacgagc gatgcaggtg
    13441 gcaattgcag cctgggattg ctttactcgc gttggcccgg cggaaggtga acgcgccatt
    13501 gctcaggcga ttgtttacct ggcctgcgcg ccaaaaagca acgctgtcta cactgcgttt
    13561 aaagctgcgc tggcggatgc tcgcgaacgt ccggattatg acgtgccggt tcatttgcgt
    13621 aatgcgccga cgaaattaat gaaggaaatg ggctacgggc aggaatatcg ttacgctcat
    13681 gatgaagcaa acgcttatgc tgccggtgag gtttacttcc cgcgggaaat agcacaaaca
    13741 cgctattatt tcccgacaaa caggggcctt gaaggcaaga ttggcgaaaa gctcgcctgg
    13801 ctggctgaac aggatcaaaa tagccccata aaacgctacc gttaatgtta tcgttgcggt
    13861 aatgttgtta ctgtatccct gtggtcgcag gctgtggcca catctcccat ttaattcgat
    13921 aagcacagga taagcatgct cgatcccaat ctgctgcgta atgagccaga cgcagtcgct
    13981 gaaaaactgg cacgccgggg ctttaagctg gatgtagata agctgggcgc tctcgaagag
    14041 cgtcgtaaag tattgcaggt caaaacggaa aacctgcaag cggagcgtaa ctcccgatcg
    14101 aaatccattg gccaggcgaa agcgcgcggg gaagatatcg agcctttacg tctggaagtg
    14161 aacaaactgg gcgaagagct ggatgcagca aaagccgagc tggatgcttt acaggctgaa
    14221 attcgcgata tcgcgctgac catccctaac ctgcctgcag atgaagtgcc ggtaggtaaa
    14281 gacgaaaatg acaacgttga agtcagccgc tggggtaccc cgcgtgagtt tgactttgaa
    14341 gttcgtgacc acgtgacgct gggtgaaatg cactctggcc tcgactttgc agctgcagtt
    14401 aagctgactg gttcccgctt tgtggtaatg aaagggcaga ttgctcgcat gcaccgcgca
    14461 ctgtcgcagt ttatgctgga tctgcatacc gaacagcatg gctacagtga gaactatgtt
    14521 ccgtacctgg ttaaccagga cacgctgtac ggtacgggtc agctgccgaa atttgctggc
    14581 gatctgttcc atactcgtcc gctggaagaa gaagcagaca ccagtaacta tgcgctgatc
    14641 ccaacggcag aagttccgct gactaacctg gtgcgcggtg aaatcatcga tgaagatgat
    14701 ctgccaatta agatgaccgc ccacacccca tgcttccgtt ctgaagccgg ttcatatggt
    14761 cgtgacaccc gtggtctgat ccgtatgcac cagttcgaca aagttgaaat ggtgcagatc
    14821 gtgcgcccgg aagactcaat ggcggcgctg gaagagatga ctggtcatgc agaaaaagtc
    14881 ctgcagctgc tgggcctgcc gtaccgtaaa atcatccttt gtaccggcga catgggcttt
    14941 ggcgcttgca aaacctatga cctggaagta tggatcccgg cacagaacac ctaccgtgag
    15001 atctcttcct gctccaacgt ttgggatttc caggcacgtc gtatgcaggc acgttgccgc
    15061 agcaagtcgg acaagaaaac ccgtctggtt cataccctga acggttctgg tctggctgtt
    15121 ggtcgtacgc tggttgcagt aatggaaaac tatcagcagg ctgatggtcg tattgaagta
    15181 ccagaagttc tgcgtccgta tatgaacgga ctggaatata ttggctaata cccaattttt
    15241 ctgaatctaa aaagcgcctg cgggcgcttt ttttgtctcc ctttgatacc gaacaataat
    15301 tactcctcac ttacacgtaa tactactttc gagtgaaaat ctacctatct ctttgatttt
    15361 caaattattc tatgtataca agcctatata gcgagctgct atagaaataa ttacacaata
    15421 cggtttgtta ctggaatcaa tcgtgagcaa gcttgagtga gccattatga aaacgaaaat
    15481 ccctgatgcg gtattggctg ctgaggtgag tcgccgtggt ttggtaaaaa cgacagcgat
    15541 cggcggcctg gcaatggcca gcagcgcatt aacattacct tttagtcgga ttgcgcacgc
    15601 tgtcgatagc gccattccaa caaaatcaga cgaaaaggtt atctggagcg cctgtacagt
    15661 taactgtggt agtcgctgcc cgctacgtat gcacgtcgtg gacggtgaaa tcaaatatgt
    15721 cgaaacggac aataccggcg atgacaatta cgacggcctg cactaggttc gcgcctgcct
    15781 gcgtgggcgt tccatgcgtc gccgtgtcta caatccggat cgcctgaaat atccgatgaa
    15841 acgagtcggg gcgcgcggtg aaggcaaatt cgagcgcatt agctgggaag aagcctacga
    15901 catcatcgcg accaatatgc agcgcctgat caaagagtac ggcaacgagt ctatctatct
    15961 gaactatggc accggtacgc tgggcggcac catgacccgc tcctggccgc cgggaaatac
    16021 cctggtcgcg cggctgatga actgctgcgg cggctatctg aaccattacg gcgactactc
    16081 ctccgcgcaa attgcggaag gtttgaacta tacctacggc ggctgggcag atggcaacag
    16141 cccgtcggat atcgaaaaca gtaagctggt agtgctgttt ggtaataacc ctggcgaaac
    16201 gcgaatgagt ggcagtgggg tgacttacta tcttgaacag gcacgccaga aatctaatgc
    16261 ccgcatgatc atcatcgatc cgcgctatac cgacaccggt gccgggcgcg aagatgagtg
    16321 gatccctatt cgtccgggaa cagatgccgc actggttaac ggtctggcgt acgtcatgat
    16381 cactgaaaac ctggtggatc aggcattcct cgataaatat tgcgttggct acgatgagaa
    16441 aaccctgcca gccagtgcgc cgaaaaatgg ccactataaa gcttatattc tgggtgaagg
    16501 gccagatggc gtggctaaaa caccggaatg ggcctcacaa atcaccggtg ttccggcaga
    16561 caaaatcatc aaactggctc gtgaaatcgg cagtaccaaa ccggcgttta tcagccaggg
    16621 atggggcccg cagcgtcacg ctaacggtga aatcgcaacc cgtgctatct cgatgctggc
    16681 gattctgacc ggtaacgttg gtattaacgg aggcaacagc ggcgcgcgtg aaggttcata
    16741 cagcttaccg tttgtccgta tgccgacctt ggaaaacccg atccagacca gcatttcgat
    16801 gtttatgtgg accgatgcca ttgaacgtgg cccggaaatg acggcactgc gtgatggtgt
    16861 acgcgggaaa gataagctgg atgtgccgat caaaatgatc tggaactatg ccggtaactg
    16921 cctgattaac cagcattctg aaatcaaccg tacccatgaa atccttcagg atgataagaa
    16981 gtgcgagctg attgtggtta tcgactgcca catgacctca tcggcgaaat atgctgacat
    17041 cctgctgcct gactgcaccg cttccgaaca gatggacttt gcgctggatg catcctgcgg
    17101 gaatatgtct tacgtgattt tcaacgatca ggtgattaaa ccgcgctttg aatgtaagac
    17161 catctatgaa atgaccagcg aactggcaaa acgtcttggc gttgagcaac agtttactga
    17221 aggccgtaca caggaagagt ggatgcggca tctgtatgcc cagtcgcggg aagcgattcc
    17281 tgaactacca acgtttgaag agttccgcaa gcaggggatc tttaaaaagc gcgacccaca
    17341 agggcaccac gttgcttata aagctttccg tgaagatcct caggcaaatt cactgaccac
    17401 gccatcgggc aaaattgaga tttattcgca ggcgctggct gacattgccg ctacctggga
    17461 attgccagaa ggagatgtga tcgatccact gccgatctac acgccgggct ttgaaagtta
    17521 tcaggatccg ttgaacaaac agtatccgct gcagcttacg ggtttccact ataaatctcg
    17581 cgttcactca acttacggcg acgttgatgt gctgaaagca gcttgccgtc aggaaatgtg
    17641 gatcaacccg cttgatgcgc aaaaacgcgg tatcaacaac ggcgataaag tcaggatctt
    17701 taacgatctt ggtgaggttc atattgaggc gaaagtgacg ccacgaatga tgccgggtgt
    17761 ggtcgcactg ggtgaaggtg cctggtatga cccggataca aaacgtgtcg ataagggcgg
    17821 ttgtatcaac gtactgacca ctcaacgtcc gtctcctctc gctaagggga atccgtcaca
    17881 tacaaacctt gttcaggttg aaaaggtgta aggagtaacc gatgacaacc cagtatggat
    17941 tttttattga ttccagccgt tgcaccggtt gcaaaacctg cgagctggcc tgtaaagact
    18001 acaaagattt gacgccagaa gtcagcttcc gccgcattta tgaatatgct ggcggcgact
    18061 ggcaggaaga taacggtgtc tggcaccaga acgtgtttgc ctactatctg tcgatttcat
    18121 gtaaccactg cgaagatccg gcttgtacta aagtctgccc gagcggtgcg atgcataaac
    18181 gtgaagatgg ttttgttgtg gtcgatgaag atgtgtgcat tggctgccgc tactgccata
    18241 tggcttgccc gtatggc
//
LOCUS       DADKRT010000080        17935 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.081, whole genome shotgun sequence.
ACCESSION   DADKRT010000080 DADKRT010000000
VERSION     DADKRT010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17935
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.081"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..118)
                     /locus_tag="JQ356_002260"
     CDS             complement(<1..118)
                     /locus_tag="JQ356_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY4622337.1"
                     /translation="MKRKVLAMLVPALLVAGAANAAEIYNKDGNKVDFYGKMV"
     gene            679..1044
                     /locus_tag="JQ356_002261"
     CDS             679..1044
                     /locus_tag="JQ356_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY4622338.1"
                     /translation="MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALW
                     AFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL
                     LGSIAWYTRPRPARSRRYE"
     gene            1084..1788
                     /locus_tag="JQ356_002262"
     CDS             1084..1788
                     /locus_tag="JQ356_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HAY4622339.1"
                     /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD
                     DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH
                     VIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ
                     HRPLDDKRYALDHFQTKLLKLPQTMQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGE
                     NEGVDHKVIDAFSPAG"
     gene            1855..3273
                     /locus_tag="JQ356_002263"
     CDS             1855..3273
                     /locus_tag="JQ356_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HAY4622340.1"
                     /translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENH
                     WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG
                     FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEH
                     IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
                     AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
                     ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
                     YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMAKGEKDFDDP
                     LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
                     EPKIKQAVALRQQEAQHGRRSR"
     gene            3254..3724
                     /locus_tag="JQ356_002264"
     CDS             3254..3724
                     /locus_tag="JQ356_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HAY4622341.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
                     SLPGSPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
                     RLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA"
     gene            complement(3713..4633)
                     /gene="yedA"
                     /locus_tag="JQ356_002265"
     CDS             complement(3713..4633)
                     /gene="yedA"
                     /locus_tag="JQ356_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HAY4622342.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LAAGILLMAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
                     SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
                     VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
     gene            4806..5723
                     /locus_tag="JQ356_002266"
     CDS             4806..5723
                     /locus_tag="JQ356_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HAY4622343.1"
                     /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
                     AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
                     EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVA
                     ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
                     KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT
                     VLNLILGFIIGGIVVLGVKAVAKIRGQAH"
     gene            5802..5984
                     /locus_tag="JQ356_002267"
     CDS             5802..5984
                     /locus_tag="JQ356_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2158 domain-containing protein"
                     /protein_id="HAY4622344.1"
                     /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
                     ETELVPGEGSRSAEEV"
     gene            6155..7849
                     /gene="yedQ"
                     /locus_tag="JQ356_002268"
                     /pseudo
     CDS             6155..7849
                     /gene="yedQ"
                     /locus_tag="JQ356_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310721.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
     gene            complement(7846..8661)
                     /locus_tag="JQ356_002269"
                     /pseudo
     CDS             complement(7846..8661)
                     /locus_tag="JQ356_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310720.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
     gene            complement(8959..9175)
                     /gene="yodD"
                     /locus_tag="JQ356_002270"
                     /pseudo
     CDS             complement(8959..9175)
                     /gene="yodD"
                     /locus_tag="JQ356_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416463.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid resistance protein YodD"
     gene            9284..9526
                     /gene="dsrB"
                     /locus_tag="JQ356_002271"
     CDS             9284..9526
                     /gene="dsrB"
                     /locus_tag="JQ356_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HAY4622345.1"
                     /translation="MPEKRNCSTLAQSHRRKTMKVNDRVTVKTDGGPRRPGVVLAVEE
                     FSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE"
     gene            complement(9570..10193)
                     /gene="rcsA"
                     /locus_tag="JQ356_002272"
     CDS             complement(9570..10193)
                     /gene="rcsA"
                     /locus_tag="JQ356_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HAY4622346.1"
                     /translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD
                     SQRPSVVFINEDCFIHDASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL
                     ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD
                     QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR"
     gene            complement(10478..11263)
                     /gene="fliR"
                     /locus_tag="JQ356_002273"
     CDS             complement(10478..11263)
                     /gene="fliR"
                     /locus_tag="JQ356_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HAY4622347.1"
                     /translation="MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKL
                     GLAMMITFVIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII
                     GLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG
                     GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGF
                     PLTLTVGISLMAALMPLIAPFCEHLFSEMFNLLADIISELPLI"
     gene            complement(11272..11541)
                     /gene="fliQ"
                     /locus_tag="JQ356_002274"
     CDS             complement(11272..11541)
                     /gene="fliQ"
                     /locus_tag="JQ356_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HAY4622348.1"
                     /translation="MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQI
                     NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG"
     gene            complement(11551..12287)
                     /gene="fliP"
                     /locus_tag="JQ356_002275"
                     /pseudo
     CDS             complement(11551..12287)
                     /gene="fliP"
                     /locus_tag="JQ356_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310714.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly.; frameshifted; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
     gene            complement(12287..12652)
                     /gene="fliO"
                     /locus_tag="JQ356_002276"
     CDS             complement(12287..12652)
                     /gene="fliO"
                     /locus_tag="JQ356_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliO"
                     /protein_id="HAY4622349.1"
                     /translation="MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWQVKRLGF
                     APKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEI
                     PQTDFQSVMKNLLKRSGRS"
     gene            complement(12655..13068)
                     /gene="fliN"
                     /locus_tag="JQ356_002277"
     CDS             complement(12655..13068)
                     /gene="fliN"
                     /locus_tag="JQ356_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HAY4622350.1"
                     /translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGG
                     GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
                     GYLIAQGEVVVVADKYGVRITDIITPSERMHRLSR"
     gene            complement(13065..14069)
                     /gene="fliM"
                     /locus_tag="JQ356_002278"
     CDS             complement(13065..14069)
                     /gene="fliM"
                     /locus_tag="JQ356_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HAY4622351.1"
                     /translation="MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQR
                     RVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
                     NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
                     ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
                     LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQIL
                     KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
                     "
     gene            complement(14074..14538)
                     /gene="fliL"
                     /locus_tag="JQ356_002279"
     CDS             complement(14074..14538)
                     /gene="fliL"
                     /locus_tag="JQ356_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HAY4622352.1"
                     /translation="MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADD
                     KAQQRVVPSPVFYALNTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLL
                     LLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR"
     gene            complement(14643..15770)
                     /gene="fliK"
                     /locus_tag="JQ356_002280"
     CDS             complement(14643..15770)
                     /gene="fliK"
                     /locus_tag="JQ356_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook length control protein FliK"
                     /protein_id="HAY4622353.1"
                     /translation="MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTD
                     KAAPQLLVATDKPTTKGEPLISDILADAQQADLLIPVDETLPVINDEQSTSTPLTTAQ
                     TMTLAAVADQNTTKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDVPSTVLPAEKP
                     TLFTKLTSAQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPH
                     QTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLK
                     VDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQ
                     QQQSQRTVNHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA"
     gene            complement(15767..16210)
                     /gene="fliJ"
                     /locus_tag="JQ356_002281"
     CDS             complement(15767..16210)
                     /gene="fliJ"
                     /locus_tag="JQ356_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FliJ"
                     /protein_id="HAY4622354.1"
                     /translation="MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLID
                     YQNEYRNNLNSDMSAGMTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWR
                     EKKQRLQAWQTLQERLSTAALLAENRLDQKKMDEFAQRAAMRKPE"
     gene            complement(16229..17597)
                     /gene="fliI"
                     /locus_tag="JQ356_002282"
                     /pseudo
     CDS             complement(16229..17597)
                     /gene="fliI"
                     /locus_tag="JQ356_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
     gene            complement(17597..>17935)
                     /gene="fliH"
                     /locus_tag="JQ356_002283"
     CDS             complement(17597..>17935)
                     /gene="fliH"
                     /locus_tag="JQ356_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707825.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HAY4622355.1"
                     /translation="ASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
                     PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQE
                     LCRLAAPGVV"
BASE COUNT         4400 a         4490 c         4719 g         4326 t
ORIGIN      
        1 caaccatctt gccgtagaaa tcaactttat tgccatcttt attgtaaatt tcagccgcat
       61 ttgctgcgcc agcaactaat aacgccggga ccagcattgc cagaactttt cttttcatta
      121 tgtattccct tgtgattata atcttcatga atatatcaat aagtgccgtt atccaaaaaa
      181 aagcacattt ggatactatt ctatgaagtt catttcattt taagtattac atgcaacaaa
      241 tgtatttaaa agatttcaaa atgtttctaa tctatttaat ataattcaga gatatgaatt
      301 ataaatattc atgaaaatta tgaatgtata tcaatatgtt atgagttgag cggaaacata
      361 gggggtatca atgattgttg cgccaaacgg ctggtgtgat caggcgcaca ttaatgaagg
      421 cataaaaaaa agccggcatc atgccggccc aaaaaatata aacaagacga taaaaggcta
      481 ataacggaag catcatgaca cagaataata aaaaggtata attgtaatca gtgctaatat
      541 attgattaaa tgaattaata aagccgatat caaagataaa taaaatcgct caaaacgatt
      601 tttcctgtat tcactgccgt tgcgcaaaat ttatctattt gttcaaaaaa tgattgagtc
      661 ttgactggct catccaatgt ggaaaaatgt gacttttatc acataatagt gctaagtctg
      721 aattttccgg gttatctcaa aatggaatac ggttcgacaa agatggaaga gagactctct
      781 cgcagccctg gcggcaaact ggctttgtgg gctttctata catggtgtgg ctatttcgtc
      841 tgggcaatgg cgcgttacat ctgggtgatg agccggatcc ccgatgcccc cgtgtcggga
      901 tttgaaagcg atttaggctc taccgcggga aagtggttag gggcactggt cggattttta
      961 tttatggctc tggtcggggc attgttaggc agcattgcct ggtacacccg acctcgtccc
     1021 gcacgtagca gacgctatga ataaaaactg ctaaggtggc gactctttgg caacggagcg
     1081 cgtatggact tacaacactg gcaggcacag ttcgaaaact ggttgaaaaa ccatcatcag
     1141 caccaggacg cggcccatga cgtgtgtcat tttcgccgcg tctgggctac ggcacagaag
     1201 ctggcggcag atgacgatgt cgatatgctg gtgattttaa ccgcctgtta ttttcacgat
     1261 attgtgagcc tggcgaaaaa tcatccgcaa aggcagcgtt cttcaatcct ggcggcagaa
     1321 gagacgcgtc gcctgctccg tgaagagttc gagcaatttc cggcggagaa aatcgaggcc
     1381 gtttgtcatg tcattgccgc tcacagtttc agcgcgcaaa tcgccccctt aacaacggaa
     1441 gctaaaatcg tccaggatgc ggatcggctg gaagccctgg gggcgattgg cctggcgcgc
     1501 gtgtttgccg tttcaggggc attgggcgtg gcgctgtttg atggtgaaga tccgttcgca
     1561 cagcatcgcc cgcttgatga taaacgctac gcgctggatc atttccagac taagttgctg
     1621 aagctaccgc aaaccatgca aaccatgcaa accgcaagag gcaagcagct ggcgcagcac
     1681 aacgcgcatt ttttagtcga gtttatggcg aagctcagtg ccgaactggc gggggagaat
     1741 gaaggtgtcg atcacaaggt gatagatgcg ttttcacccg cgggataagc gcgtggccct
     1801 aaatggctgt aattatgtta acctgtcggc catctcagat ggccggttaa atctatgcag
     1861 gaaaatatat cagtaaccga ttcatacagc accgggaatg ccgcacaggc aatgctggag
     1921 aaactgctgc aaatttatga tgttaaaacg ctggtggcgc agcttaatgg tgtgggtgag
     1981 aatcactgga gcgcggcaat tttaaaacgt gcgctggcga atgactcggc atggcaccgt
     2041 ttaagtgaga aagagttcgc ccatctgcaa acgttgttac ccaaaccacc ggcacatcat
     2101 ccgcattatg cgtttcgctt tatcgatcta tttgccggaa ttggcggcat ccgtcgcggt
     2161 tttgaatcga ttggcggaca atgcgtgttt accagcgaat ggaacaaaca tgcggtacgc
     2221 acttataaag ccaaccatta ttgcgatccg gcgacgcatc attttaatga agatatccgc
     2281 gatatcaccc tcagccataa agaaggcgtg agtgatgagg cggcggcgga acatattcgt
     2341 caacacattc ctgaacacga tgttttactg gccggtttcc cttgtcagcc attttcgctg
     2401 gctggcgtat cgaaaaagaa ctcgctcggg cgggcgcacg gttttgcctg cgatacccag
     2461 ggcacgctgt tttttgatgt ggtacgcatt atcgacgcgc gtcgtccggc gatgtttgtg
     2521 ctcgaaaacg tcaaaaacct gaaaagtcac gaccagggta aaacgttccg catcatcatg
     2581 cagacgctgg acgaactggg ctatgacgtg gctgatgcag aagataacgg gccggacgat
     2641 ccgaaaatca tcgatggtaa acattttctg ccgcagcacc gtgaacgcat cgtgctggtg
     2701 ggttttcgtc gcgatcttaa tctgaaagcc gattttactc tgcgtgatat cagcgaatgt
     2761 ttccctgcac agcgagtgac gctggcgcag ctgttggacc cgatggtcga ggcgaaatat
     2821 atcctgacgc cggtgctgtg gaagtacctc tatcgatatg cgaaaaaaca tcaggcgcgc
     2881 ggtaacggct tcggttatgg aatggtttat ccgaacaatc cgcaaagcgt cacgcgtacg
     2941 ctgtctgcgc gttattacaa agatggcgcg gaaattttaa tcgatcgcgg ctgggatatg
     3001 gccaaaggtg agaaagactt tgacgatccg ctgaatcagc aacatcgtcc acgtcggtta
     3061 acgcctcggg aatgcgcgcg cttaatgggt tttgaagcgc cgggagaagc gaaattccgc
     3121 attccggttt cggacactca ggcctatcgc cagttcggta actcggtggt cgtgccggtc
     3181 tttgccgcgg tggcaaaact gcttgagcca aaaatcaaac aggcggtggc gttgcgtcag
     3241 caagaggcac aacatggccg acgttcacga taaggccact cgcagcaaaa atatgcgcgc
     3301 gattgccacg cgtgatacgg cgattgagaa gcgcctcgcc agtctgttaa ccgggcaggg
     3361 cctggcgttt cgcgttcagg acgccagtct gcccggaagc ccggattttg tcgttgatga
     3421 atatcgctgc gtgatattta cccatggctg cttctggcat catcatcact gctatctgtt
     3481 taaagtgcct gcgactcgaa ccgagttctg gctggagaag ataggtaaaa atgttgaacg
     3541 cgatcgccgc gatatcagtc gtttgcagga actcggctgg cgcgtactga ttgtctggga
     3601 gtgtgcatta cgtgggcgcg agaagctgac ggatgaagcg cttaccgagc gtctggaaga
     3661 gtggatctgc ggcgaaggtg ccagcgcgca gatcgacacg caggggattc atttactcgc
     3721 ttgatgcgtc ctgaataact ggcgcaacta cgggttttgc cgggaagaga tattttccca
     3781 acgtgaccag taccaccgcg aagacaatta cgccgagcgc cagccattca atcttcgaca
     3841 gcgtctctcc gcccagtccc gtacccagca agaccgcgac caccgggtta acgtaggcgt
     3901 agctggtggc gagagccgga ctgacattac ggattaaata catataagcg ttgatggcga
     3961 taatcgaacc aaacagcgcc agatagccga ccgcaaggaa gcctgaaagg gaagggagcg
     4021 ccgtcagttt ttcacctgca atcatcgacg cgatcattaa caccacgcct gccgccagca
     4081 tctcaatcgc acccgccatc atccctacag gtaaggtaat gcgcgagcca taaaccgagc
     4141 caaacgccca gctaatcgag ccgattaaaa tcagaatcgc gccccacgga ttgccgctta
     4201 aatttccacc gctattgagc atgatgattc cggcaagccc aatggcgata cccacccatt
     4261 ccaatttgcg cgttttaatg ccaaacaggc ggctgaagca cagggtaaag aggggcacgg
     4321 ttgcaaccac aacggcggcg atgccggaag gaacattttg atgctcggca accgtcacca
     4381 tgccattacc gacagccagc aataacaggc caatcagcgc ggcattgagc agcggacgta
     4441 gcggggggag cttgtgtccg cgcagtagca aaaatgccat caataaaata ccggctgcca
     4501 ggaatcgaac gcctgccatc attaacggag gccagctttc cacgccaatc cgaatgacaa
     4561 aataggttga gccccaaatg atatacaacg caaacagcgc gccaaaaagc ggtaacaact
     4621 ggcggaaacg cataatccct cacggtggaa ataaaaaggt ggttcatagt aaacgtgaaa
     4681 atcattctgc tggcgagaga tataattgca cttgattgtt aaaaaaatgt tgacctgtga
     4741 agcaagtatc agagctgccg tttttgcttc atacttacac ccttcaacaa taaaaatgag
     4801 agggaatgct tttggccggg agtagtttac tgacgttgct cgatgatatc gccacactac
     4861 tggacgatat ctccgtgatg ggcaaactgg cggcgaagaa aaccgccggt gtattagggg
     4921 atgacttatc gctcaatgcg caacaagttt caggcgtgcg ggccaaccgg gaacttcccg
     4981 tggtctgggg cgtggcgaaa ggatcgctga ttaataaagt gattctggtg ccgctggcgc
     5041 tgatcatcag tgcgtttatc ccgtgggcga ttacgcctct gttgatgatt ggtggcgcgt
     5101 ttctctgctt tgaaggagta gagaaagtgc tgcatatgct ggaggcgcgt aaacataaag
     5161 aagatccggc gcagagccag cagcgtctgg agaagctggc ggcgcaggat ccgctgaagt
     5221 ttgaaaagga caaaataaaa ggggcgattc gtaccgattt tatattgtct gccgaaatcg
     5281 tcgccatcac gctggggatt gtggccgaag cgccgttgct taatcaggtg ctggtgcttt
     5341 caggcatcgc gctggtagtg accgtgggcg tctacggtct ggtaggggtt atcgttaaga
     5401 ttgatgacct ggggtattgg ctggcggaaa aatccagcgc gctgatgcag gcattaggta
     5461 aagggttatt gatcattgcg ccctggctga tgaaagcgtt atcgattgtc ggcacgctgg
     5521 cgatgttcct cgtcggcggc gggattgtgg tacatggtat tgcgccgctg catcacgcca
     5581 ttgaacattt cgccgggcag caaagtgcag tggtggcgat gatattaccg actgttttaa
     5641 atctgattct tggatttatc atcggcggca tcgtggtgct gggagtgaaa gccgtagcga
     5701 aaatacgcgg tcaggcacat taatactcgc acaggctatt atgcaaaatt cgccatcttc
     5761 aactaaggtg aacaagtttc actcgaaaaa aggaggcgag tatgagcttt atggttagtg
     5821 aggaagttac ggttaaagag ggcggcccgc ggatgattgt caccggatac tccagcggta
     5881 tggttgagtg tcgttggtat gacggttacg gggtcaagcg ggaagctttt catgaaaccg
     5941 agcttgttcc gggggagggg agtcgttctg cggaagaagt ttgaaagggt atcattaaca
     6001 ccaggccgga tcacttccgg cctggtgtgc caatgcctgc aatgaatgat agtcgcgtct
     6061 tatcatgcca ccattataaa attatcgctg ttttgcggta cgctatcgcc aggttatgcc
     6121 agaatcataa aaaagcaggt tgggagtcgt cagggtgcag cacgagacaa aaatggaaaa
     6181 ccagagctgg ttgaaaaaaa tcgcacgccg cctggggcct ggtcatgtcg ttaatctctg
     6241 ctttatcgtg gtattgcttt tttccacctt gctgacctgg cgtgaagtgg tagtgctgga
     6301 agatgcctat atctccagtc agcgtaatca tctggaaaac gtagccaacg cgctcgataa
     6361 gcatttgcag tataacgtcg acaaactgat ctttttgcgt aatggcatgc gcgaagctct
     6421 cgtagcgcca ctggatttca cttcactgcg taatgctgta accgagttcg aacagcatcg
     6481 cgacgagcac gcctggcaaa ttgaactcaa ccgacgacgc accctgtcag tcaatggcgt
     6541 atcggatgca ttagtcagcg aggggaatct cctgtctcgc gaaaatgaaa gcctcgacaa
     6601 tgaaattacc gctgcactgg aagttggtta cttgctgcga ctggcgcaca acacctcgtc
     6661 gatggttgaa caggcgatgt atgtctcgcg tgccggattt tacgtttcga cgcagccgac
     6721 cttgtttacg cgcaatgtac caacgcgtta ttacggctat gtcacccaac cctggtttat
     6781 cggccattcg caatgagaaa atcgtcaccg cgcggtacgc tggtttactt cgcaaccgga
     6841 acacgccagc aatactgaac cgcaggttac cgtcagtgtt ccggtagaca gtaataacta
     6901 ctggtatggc gtgctgggga tgagtattcc cgtgcgtacc atgcagcaat ttttaagaaa
     6961 cgccatcgat aaaaacctcg atggtgagta tcagctctat gacagtaagc tgagattttt
     7021 gacctcttcc aatcctgacc atccaacagg gaatattttt gatcctcgtg aactggcctt
     7081 gctggcgcag gcgatggaac atgacacgcg gggcggcatt cgtatggaca gtcgctatgt
     7141 tagctgggaa cgtctggacc atttcgacgg tgtgctggtg cgcgtccata cgctaagcga
     7201 aggcgtgcgc ggcgatttcg gcagtatcag cattgcatta accctgctgt gggcgctctt
     7261 taccaccatg ttactcatct cctggtatgt gattcgccgg atggttagca acatgtatgt
     7321 tctgcaaagc tcgttgcagt ggcaggcgtg gcacgacacc ttaacccgtt tatataatcg
     7381 tggcgcactg tttgaaaaag ctcgtccgct cgcgaaattg tgtcagacgc accaacatcc
     7441 tttttctgtc attcaggtcg accttgacca ttttaaagcg attaatgacc gctttagtca
     7501 tcaggcgggc gaccgtgttc tttctcatgc tgccggatta attagcagtt ccttgcgtgc
     7561 gcaggacgtt gccgggcggg tcggtggtga ggagttttgt gtgattctgc caggcgcgag
     7621 tctgacggag gctgcggaag tcgcagaacg tattcgcctg aagttaaatg aaaaagagat
     7681 gttgattgct aagagtacga cgatacgcat cagtgcctcg ttgggggtaa gtagcagcga
     7741 ggaagccggt gattatgatt ttgaacaact ccagtcactg gctgaccgtc ggctttatct
     7801 cgctaaacag gccgggcgta atcgggtatg cgcgagcgat aacgcttaac gagcggagaa
     7861 aaaatggtcc agcccttcac gccatccttc cggtccttca cgctgcgttc gccagacgcg
     7921 ggccggatcc tcatcatgca gatgcacccc ttcacggttt agccctttca caatcaccgc
     7981 gtaatccatt acctccagta agggcgcatc gtttggccca tcgcccaggc caagtgtggt
     8041 tgggcgtttg cctgataatt gttgataggt cgcgataatc cagttggcgg cctgatcttt
     8101 tccggcagag gcatccagga cgtgccagaa gcgcgcaccc tgcataaact gtaagcccag
     8161 ttcgttcaga cgagcggtaa attgtgccat acgctcgtca ctgtcgcgcc agattagcgt
     8221 taccgacgcc tcatgcagct gcgtcagcgc cgcctggcta cggcttaatc ccgtccattc
     8281 ggcgatggtt gcatcgtcga catcatcgaa agtcgtgaat ttaaaatgtt ctttctcgcg
     8341 tagcgtattt aaaacctggc tgatttcgcc atggctaata cctgagatga tgcgtggaaa
     8401 accgtctata tcctgccatt gttcagcaag ctggatcact gcgccatttt cggcaatcag
     8461 tggtacccct tgtaacccca acgttttttg caagtacagc atttccgctg aagttttact
     8521 gctacagaga atgacgggaa cattcgcttc gcgtaaacgg ctgagctagg gggcagccgg
     8581 ttgccagtca taactatgac tgtccagcag ggtgccatca agatcgctaa aaaccagtag
     8641 tggttgttga attgaaaaca tggtcgcgca gttctcccct taccaggatg attctcaaaa
     8701 cagcacaaat aatcaaagat gattttttcg ggagcgatcc cgttgacgcc agagccacca
     8761 aggggtgacg cacgtcacat ttctattcat aagtagcgtt aatcattcat atcgcgaata
     8821 ttttcttgtc agcgaaaaaa attgcggata aggtgatgaa cacatcagat ttcctggtgt
     8881 aacgaatttt ttaagtgctt cttgcttaag caagtttcat cccgaccccc tcagggtcgg
     8941 gattttttta ttgtgcattc aacgattcac ttcagagacg ctgaagtcat gaatatccag
     9001 ttcgaaggca tccgccaatt cacgccatgt atgatattca cgtccatcga cgctaacgtg
     9061 ttcagaatcg ttctggctgc gatgaactta tttcattgat cgccgccagc agggcatcga
     9121 catcgacgct gacctcacgt tttgcggtat cgctgtactc ttttgcggtt ttcatcatct
     9181 ttcctcgcaa ccgttactct gttgttgccg ccagtcgtta agtccgcctg gcatctctta
     9241 agtatagacc gtcgagaaaa tcagcactcg cgcgcgcctg gcgctgccag aaaaacgaaa
     9301 ttgttctaca ctggcacaaa gccacaggag gaaaacgatg aaggtgaatg atcgggtaac
     9361 agtcaaaacg gatggcggtc cgcgtcgtcc tggcgtggta ctagcagttg aggagtttag
     9421 tgaaggcaca atgtacctgg tttcgctgga agactacccg ctcggcatct ggttctttaa
     9481 tgaagcaggg catcaggacg gtatctttgt ggagaaagca gagtaatctt attcagcctg
     9541 actggtggga aaccaccagt cagaatgtgt tagcgcatgt tgacaaaaat accattagtc
     9601 acattatccg tcagtcggac gacatggtag ataacctgtt tattatgcgt tttgatctta
     9661 cgtttaatat tacctttatg cgatgaaacg gtcttggctt tgatattcat ttggtcagag
     9721 atttgaatgg ttccctgacc tgccatccac attcgcaaca tactcgattc ggttcggctc
     9781 aatgataacg tcggcatatt taaaaaagag gttatcgttg tctctttttt cagaatatcg
     9841 ccaaggatat cgtcgagaga ttccggttta atcgatttag aacttatcaa taaatttttt
     9901 ctgaccaata gatattcatc aaaatgaaca ttggcaattg ccataaaaac gataaataac
     9961 gtattgggat gttgattaat gatgtgcttg atgtgctgac tgttagaagc atcatggatg
    10021 aaacagtcct cattaataaa caccactgaa gggcgctgtg aatcacaagc tatggcaagg
    10081 tcatcaacgg tttcaatgtc gttgatttct ctttttttaa cccctctact caacagatac
    10141 ccggttaaac ctagtcgggt gtaactacat aaatccataa taatcgttga catggcatac
    10201 cctcactcaa tgcgtaacga taattcccct tacctgaata tttcatcatg actaaacgga
    10261 acaacatggg tcacctaatg cgccactctc gcgatttttc aggcggactt actatcccgt
    10321 aaagtgttgt ataatttgcc tggaattgtc ttaaagtaaa tgttgcgata tgtgagtgag
    10381 cttaaaacaa atatttcgcc gcaggagtat cctggaagat gttcgtaggt attatttttc
    10441 ggataatcct taggataaca tgataaacgt tacggaatta tattaatggc aattcactaa
    10501 taatatcagc cagcaaatta aacatctcac tgaataaatg ttcgcaaaaa ggtgcaatta
    10561 acggcattaa tgccgccatt aaagagatac cgacagtcag agttaatgga aatccaataa
    10621 caaaaatgga taattgcggg gccatacgat tcagtaaacc taatgccaga ttcagggtca
    10681 gcagcagagt aatgagcggt aacgccagca tcagcccgtt aaggaaaatc aaactccccg
    10741 ctttggtgag tgccagaaac gcattgctgt tcaacggttc gccaccaatt ggcagggtgt
    10801 gaaaggtatc gaccagcagt gaaatcaacc ataaatgacc gttaaatgtc aggaacagca
    10861 gtaacgccag catatccatg atacgcgcta aaacgggcat attgagatgg ctggccggat
    10921 cgacaaacgt cgcaaatgac agccccattt gcagaccgat aatttcgcca gcggttcgca
    10981 cagcggcaaa ggcaaattgc atggtaaaac caagcgcaat gccgatcagg atctgctgca
    11041 cggccagcca cagagcaaag aacgaaaaaa caggaacatc gttggcaggt aatgatgggg
    11101 caatgacgaa cgtgatcatc attgccagcc ccagttttac ccgtttcggc acgctgcgtt
    11161 cgctcagaat tggtgcggta gaaatgagcg ccagcacgcg cagtaacggc cagaagtaca
    11221 ggcttaacca ggaaagccat tgatcgcttg tcacctgcat cattgtacgg cctacccgat
    11281 gatatacggc aggttagtga acaaggtgcg gacgtaatcc agcaacagat tgagcatcca
    11341 cggtccggca ataataatgg caataaatac ggcgatgatt tttggaataa acgacagcgt
    11401 catttcgttg atctgcgtgg cggcctgcaa aatactgatg ataaggcccg tgaccagcgc
    11461 caccagcaac agcggggcag ccagtgccag cgcgactttc atcgcttcag tccccatcat
    11521 catgaccgat tcaggtgtca ttttgcctct ctagctgtaa aagctctgcg ccagcgaacc
    11581 gaccagcaat tgccagccat ccaccagtac aaacagcatc agtttaaagg gcagagcaat
    11641 ggtggcgggg ggaccatcat catccccaat gccatcaaca cgctggcaat caccaggtcg
    11701 ataatcaaaa aaggaatgaa aatcgtgaag cctatctgaa atgcggtttt caactcgctg
    11761 gtcacgtagg ccgggcgcaa aatgcgcatc ggcacggctt caggtccctg caacgggccg
    11821 gtattcgcta gtctggcaaa caaccctaaa tctgcctcac gggtctgacg cagcataaac
    11881 tcacgtagcg gctgcgcccc tttttccagc gcctcctgca ttgatatttt ctcttcgctg
    11941 aatggctggt acgcatcgac ataaattttg tcgatcaccg gtgacataat aaaaaaggtc
    12001 aaaaatagtg ccagccccag caatacctgg ttaggtggcg cggagggcgt tcccagcgcg
    12061 ttacgcaata aaccaaaaac aatgatgatg cgggtgaaac tggtcatcat cagtaaaatt
    12121 gccggaataa acgtcaacga ggtgatgaac accagcgtct gcaccgggag cgaccagctt
    12181 tgtccaccgc caggcagcgg ctggctggtg atacccggca gttgcgcgaa ggcgaggggc
    12241 gtaaccagcc agagaaggac aggtgcgaca gacaacaaac gacgcatcag gatctcccac
    12301 tacgcttaag caaatttttc atgaccgact gaaaatcggt ctgcggtatc tcttctgttg
    12361 gtgctgaagg gggaagttta tgcagcagat tgatttgccc tgcggtaacg ccgagcacca
    12421 gccgtgcatc ttccacatcg accaccacaa cccgttcacg cgcgcccagc gaagcactgg
    12481 cgctaatttt cagaccgtta acgccagtgc gtttcggggc aaatcccaac cgttttacct
    12541 gccaggcagc agcgaggatc agggcaataa tggcgatgag tgcgccgctg acctgcagca
    12601 gtggcgcagc agaaaccggc gtggaagatt gcacagtagc gtggttattc atcactaacg
    12661 gctcaggcga tgcattcgct cagacggagt aatgatatcg gtgatccgca cgccatattt
    12721 atcggcaacg accaccactt cgccctgggc gattaaataa ccgttgatca gaatatccag
    12781 tggttcgccc gccagaccgt ccagcgccac gacggaccct tgcgtcagac gcaacagctc
    12841 tttgatggtc atccgcgtac ggcccagctc gacggtcagc ttgaccggaa tatccattat
    12901 caggtcgata tcctgcaacg ttccgctgac atcaccaccg ccaaattgct ggaacaccgc
    12961 gtcggcagcg cttttgctgc tggttgattt ttgttcgctc aacgcttcag cccacagatc
    13021 gtccattgcg ccgttgttgt catcggccgg attattcatg tcactcattt gggctgttcc
    13081 tcgttcagag aatttaaaat cgggttaatc aaatgttcta tccgtaacgc atactgaccg
    13141 ttgagagtgc cgtactgact ggtcagcacc gggacgccgt caacatgggc gatgatgcga
    13201 tcaggttttt ctatcggcag gacgtcgccg ggtttcagtt ttaaaatctg cgacaggcgt
    13261 agcgagatat cggcaaagtt ggcgaccagc tccagctgtg aatgctgcac ctggcgcacc
    13321 aggttatcgc gccagttctg atcttcatta cgcgagtttt ccagcggcgg gttaaccaac
    13381 aattcccgta gcggctcgat catgctgaat ggcagacaga tattaaattc gccggtcagg
    13441 ttgccaatct ccacatggaa cggcgtgtta accacaatgt cgttcggcga ggtggtgata
    13501 ttggtaaatt tcacctgcat ttccgaacgc acgtactcaa cttccagcgg attaatcgcc
    13561 ttccaggcgt cgctatagcc ttcaagcgcc agctttaaca tgcggttgat gacgcgctgt
    13621 tcggtatggg taaactcgcg accttccact ttggtcggga agcgtccatc gccgccaaac
    13681 aggttatcca cggcgataaa caccagactc ggtgaaaaca ccaccagccc tgtgccgcgc
    13741 agcggtttca gatggataag gttcaggttg gtcggcaccg gcaggttgcg ggcaaattca
    13801 tggtacggct gaatgcggat ggccccgacg gttatatccg ggctacgacg cagcaggttg
    13861 aacagcccca tacgaaaatg gcgggcaaag cgctcattaa tgatttccag cgcctgcaaa
    13921 cgttcgcgca caacccgtcg ttgggtattc ggatcgtacg gacgaatgtc actttcgccg
    13981 ctaacactgg ctgtcggttc gtctttgact tcgctgtcac cattcaacag cgcatcaatt
    14041 tcagcttgag aaagaatact atcgcccatg tcgttatcgc agaataaaag cggtatacag
    14101 cacgtcggtg acatcctgtt tcggttgccc ggcaacaagc ggggtggaaa gcgtggtttt
    14161 aatctcggca atcaggtttt tcttgccttc ttctgtcgcc agtacggcag catcctgacg
    14221 cgaaaacagt aacagcaaac ggctacggac ttccggcaaa tactcactca gccgcgagcg
    14281 ggtagcttca tctttcaggc gcagggttat gccgatataa agcacgcgat ccgcatcgcc
    14341 caaattgacc gtgaaggtat tcagcgcgta gaagaccggg gagggtacga cgcgttgctg
    14401 cgctttgtcg tcagcggcaa cctgatgcga atgccagtag ctgtaacctg cgctggcaca
    14461 ggccgcgagg gtaatgaata ccagaatcgg gatccaaagc gatcgcttgc ttttcttgct
    14521 tatcgcgtaa tcagtcatgt gttgcggtct tcctgtgtcg ctactgctta tcggctaatt
    14581 atcctgcgtt ttgagcgcaa caaagcgggg aaaagacgcg gattacggtg ctacctctga
    14641 cgttaggcga aaatatcaac gccgctgttg cctgttacac gcccttgtaa agagacggga
    14701 accggaagcg tatcgtcgtc ttcccccgcc agaggttcat ggtttactgt gcgttggctt
    14761 tgctgttgtt gggaagcggc ctgctgctga ccactaaagc tttcgccact gatgttgctt
    14821 tgccctaact gaatgccact ttcggccagc tgcgtacgca gtaccggaag cgctgcttcc
    14881 agcgcggcgc gtacatgctg atgcggtgaa accatctgga tttgcgcctg gttatcatcc
    14941 actttgaggg agatttgcac ttcacctaaa tcctgcgggt gcagacgcaa ctctgcactt
    15001 tgttgcccct ggcgggtgaa cagcgaaata tgctggctta atgattgttg ccattcgtga
    15061 gaacccagcg gtgcactcaa aacaggcgcg gcgacggtgg gcagtggctg tgtctggtgt
    15121 ggagtaatta gcgggctggc ggcagcggtc accggtgacg gtgtgctgat gacttccgct
    15181 ttactctggg cttctgctac cagcggtgtt aatggctgag ctggcgtgcc gggggcatca
    15241 tcaggctgtg ctgttgtgag ttgcgcagaa gtcagttttg tgaagagcgt tggtttctct
    15301 gccggtaaca cggttgacgg cacatcagtc actttgggcg tattgtcaaa acccggcaac
    15361 atcgcaaaaa gggcgctcag gcttgcggtg acgtcttcat tcagatcatc cgctttttcg
    15421 tcttttgtcg tattttggtc agccaccgca gccaacgtca tcgtctgagc ggtggttaac
    15481 ggtgttgatg tggattgttc gtcgttgatg acaggcagtg tttcatccac ggggatcagt
    15541 aaatccgctt gttgcgcgtc ggcaagaata tcgctgatca gcggctcgcc ttttgtcgtg
    15601 ggcttatctg ttgccaccag caactggggg gccgctttgt cggtagttgt ctcgcctgct
    15661 aatgcttcgc tcaacaacgc gagaaaatct tgtgcagcat cgctggcttt gccgccaggc
    15721 aatgtggtgg tgtcaacgtc ggcggtaatt aagggcgcta agcgaatcat tcaggtttcc
    15781 tcatggcggc gcgctgggcg aactcatcca tctttttctg atcgaggcgg ttttctgcaa
    15841 gcagtgccgc cgtggatagc cgttcctgca gtgtctgcca ggcctgcaaa cgttgtttct
    15901 tttctcgcca gctgttcagg gcaatgtcaa ctttctgcgt ccactgatta agttgctggc
    15961 gatgctgagt aatggctttt tccagcgtct ggataaactg ctgatagttg atccagcggt
    16021 tgctggtcat cccggcactc atatcgctgt tgaggttatt gcgatattca ttctgataat
    16081 cgatcagcat tttgagctgt tcttccgcct gctgacaccc gcgacgcatt tcacccagca
    16141 ggcgcgcggc atcctctacc tctttttctg ccagatcttt cagggtcgcc agcgcgccat
    16201 gttctgccat ctgccgttat ctcctgggtt atgacactgt cgggaaaata cgctccagcc
    16261 cctggagaga cgcttcccag tccgcgcgtt caaaaatgcc ttgttgcaaa tagccctcca
    16321 gctgcggcca cagggcgatg gctttgtcga gcatcggatc gctgcctttg gcatacgcgc
    16381 cgacgctaac cagatcgcgg ttacgctgaa aactcgacaa cagctgtttg aaggtgcgca
    16441 ctcgcgcgta atgttgctca ctgatcaacg ccgtcattgc gcggctgatc gacgcttcaa
    16501 tatcgatagc cggatagtgc ccggcttccg ccagtcggcg agacagcaca atgtgaccgt
    16561 cgaggattgc ccgcgcagag tcggcaatgg ggtcctgctg gtcatcgcct tcagtgagca
    16621 cggtataaaa cgcggtaatc gatccgccgc cgctaatgcc atttccggca cgctcgacca
    16681 gtgccggtaa tttggcaaac accgacgggg gataaccttt agtggcgggt ggttcgccaa
    16741 tcgccagcgc aatttcacgc tgggccatcg cgtagcgggt gagggagtcc ataatcagca
    16801 acacatgctg accacgatcg cgaaaatctt cggcaatgcg cgtggcatag gcggcaccct
    16861 gcattcgcag gagaggagaa acatccgccg gagcggcaat caccacggag cgtgcacgcc
    16921 cttcggcacc gaggatattc tcaataaaat cttttacttc gcgtccgcgt tcaccaatca
    16981 aacccacgac aatgacatcg gcgcgggtgt aacgtgccat catccccagc agcacacttt
    17041 taccaacgcc ggacccggca aacagcccca tacgctgccc acgcccaacg gtaagcaggg
    17101 cattgattgg gcgcacgccg gtgtccagca catgttcaat cggtgtacgt tgcaacgggt
    17161 taaatggcgg ggtaatcagc gcaccggttt ccgtcgtatc gggggaggcc atcgagcggt
    17221 ttaccgctgc cgtccagaac acgacctaat aacgccggac cgagcggtaa ctgtttgccg
    17281 ctttgcagcc cttctgccga aatgtttttg gcataaacac gcgcgccggg caggacacct
    17341 tcgacttcct ccagcggcat taaaaacagc cgttgaccgt taaagccaac gacttcactt
    17401 tctacttcgt gcgtttcagt gccgttctgg cgctcaatca cacaggttgc gccgagcggc
    17461 aattgtaatc cggtggcttc cagcaccagc ccggtagcgc gggttaatcg cccgtagcga
    17521 cgtaccgcag gcaactgcgc cattttggct tcaaagttat ccagcgtggt tagccagcga
    17581 gtcaggcgcg tggtcattac accactcctg gtgctgccag acggcagagt tcttgccagc
    17641 gagtggcgac actggcgtcg agatcgcctt catcggcgga gactttacag ccgccaggat
    17701 ggagggtggg atcgccccgc aagcgccagc catgcaaact taaggtagcg ccgagcatat
    17761 catccacacg ttgcagatca tccgggtgca cgcgcagctg tggtttaccg ctgaataacg
    17821 gttcttgctg caacaactgt tggatctgtt tgatgagtgc cgagttatcc actgttggcg
    17881 tctgaccgat gacctgacgt gctgcctcca gcgccatctg catcaggcgc gaagc
//
LOCUS       DADKRT010000081        17799 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.082, whole genome shotgun sequence.
ACCESSION   DADKRT010000081 DADKRT010000000
VERSION     DADKRT010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17799
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.082"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..386
                     /locus_tag="JQ356_002284"
     CDS             <1..386
                     /locus_tag="JQ356_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622356.1"
                     /translation="LAEVRQHTWSSGTNGVVAATFSLRLKGKPVSFVVPLAFVKNLDK
                     TLTVNTGALLTMSVSANGGMPPYKYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCV
                     VTDSAEKAQSVTSVECTVTVSAAAG"
     gene            401..775
                     /locus_tag="JQ356_002285"
     CDS             401..775
                     /locus_tag="JQ356_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622357.1"
                     /translation="MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLW
                     QEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGP
                     VHARLLRQALELIADAESARKK"
     gene            871..1080
                     /locus_tag="JQ356_002286"
     CDS             871..1080
                     /locus_tag="JQ356_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HAY4622358.1"
                     /translation="MWMEFDRISPLGDERGDIRNAQIVKAVFGAQGMNVALKDVMLCW
                     GEDEDKPEVDPFAALEDALSFAAQS"
     gene            1128..1388
                     /locus_tag="JQ356_002287"
     CDS             1128..1388
                     /locus_tag="JQ356_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622359.1"
                     /translation="MATLRELIIKIVSFRGTHIDAFFRRASSAAHTNARGLITVDLFC
                     CTEAIARQVPEAGSEVLSSVIASGREVLTRGLIAGDDVLTRE"
     gene            complement(1523..3124)
                     /locus_tag="JQ356_002288"
     CDS             complement(1523..3124)
                     /locus_tag="JQ356_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc49 family transposase"
                     /protein_id="HAY4622360.1"
                     /translation="MNIRIWSGILPCMDISALNTTNDIEKLRAMALAMVQEVMSENAE
                     KERELLEKSRRIQLLEEMLKLVRQQRFGKKCETLAGMQRSLFEEDVDADIAALTAHLD
                     KLLPQSPEEDEKASRSRPIRKPLPVHLPRVEKMIQPDTDHCPECDEPLHYIRDAVSEK
                     LEYIPAHFVVNRYVRPQYSCPCCQKVFSGEMPAHILPKSAVEPSVIAQVIINKYGDHL
                     PLYRQQQVFARSDVGLPVSSMADMVGAAGAALSPLAALLHRELINRPVVHADETTLKI
                     LNTKKGGKSCSGYLWAYVSGERTGPSVVCFDCRTGRSHEYPENWLQGWGGTLVVDGHK
                     AYRTLANKVPEITLAGCWAHARRGFADLYKISKDPRAAIAVKKIAGLYRLEKKISSRP
                     VEKIRQWRQRYARPILEELWSWLEEQEPQCSPGKALHKAIAYALSHRVELSRFLEDGA
                     VPLDNNVCERAIKNVVLGRKSWLFAGSQMAGERAAQIMSLLETAKRNGLEPHAWLTDV
                     LMRLPEWPEERLAELLPLEGFTFSG"
     gene            complement(3131..3523)
                     /gene="tnpB"
                     /locus_tag="JQ356_002289"
     CDS             complement(3131..3523)
                     /gene="tnpB"
                     /locus_tag="JQ356_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY4622361.1"
                     /translation="MLSPDNVFIAIKPVDMRRGIDSLTQYIQDELRSTWHEGAAFVFV
                     NKVRSRIKVLRWDKHGVWLCTRRLHKGSFRWPRANDAAWHLTPDEFNWLIAGVDWQQV
                     KGHDLTKWVWQNEPELRPENTQNTLLTQ"
     gene            complement(3510..3839)
                     /locus_tag="JQ356_002290"
     CDS             complement(3510..3839)
                     /locus_tag="JQ356_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001325657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HAY4622362.1"
                     /translation="MSKPRWTIEQKRQHVAAWRASGLTRQQYCELNDIPFTSLREWPQ
                     DVAKAERRANEPTVLPVHIAPPLHADVPQPVTNEPVTLFLPGGVRMCCQPSQLTDVFR
                     ALKYAQS"
     gene            3884..7144
                     /locus_tag="JQ356_002291"
     CDS             3884..7144
                     /locus_tag="JQ356_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_304285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY4622363.1"
                     /translation="MTEDPCEDDFPVTTLKISANSQSFQSEIQRASRMGSEYYRTLQN
                     GGRHAAAAAREQRRALAELNSQLTEIRGSAVGMAGAFAGAFATEHLISLADEWGSVNA
                     RLKQASQSSDEFSSSQKVLMDISQRTGTAFSDNAALFARSAASMREYGYSADDVLKVT
                     EAISTGLKLSGAGVAESGSVITQFSQALAQGVLRGEEFNAVNENGDRVIRALAAGMGV
                     ARKDLKAMADDGKLTADKVVPALISQLGILRDEYAAMPETVSGSITKVENAFMAWVGE
                     VNEACGVTKTLSGVLNGVAGQIDNVATAVGALVAVGVARYFGNMASGAMSATAGLVTA
                     ARNEVALAEAQFRGTQIATARARAAVYRAQQAVAAARGTEMQIAAEARLAATQERLNR
                     NIAARSAAQNALNSTTAVGSRLMSGALGLVGGVPGLVMLGAAAWYTLYQNQEQAWESA
                     RQYALTIDEIAHKTPSMSLPEASDNEGRTRAALTEQNRLIDEQASRVKSLQEKIAGYQ
                     YVLANPGWTTGDGFMINHLTSVKTVTEGLAQATEQLAVEQSRLALMQEKAQSIQDVLA
                     GLEDRRVALIRQQAAEQNKVYQSMLVMNGQHTEFNRLLGLGNELLQQRQGLVNVPLRL
                     PQATLDDKQQSALTKTERELALSRLKGEEKERVRLGYAADDLGFVGDPYQEARQRYIS
                     NALEAWRNNEANKPKSRGGKSETEKAEDSFSRLLKQQKEQLALAGQNTELAKLKYQTA
                     QGELKTLTEMQKQELLRNAALIDQQKIREQLRSREETLKNDNVAARASNEAELLGYGQ
                     GERLRERMRELQQIRDSFRQKDADLQSQYQTGDISEDFYRQALAQNAQYLSERLKEQE
                     AFYAESDVQRADWQKGLQEGFSNWVDNASDYASQAAQLATEGISGMVNNITEMLNGNK
                     VEWRSWASSVLQEISKVLMNAAIVNGIKTAANSMSGAGGFIGSIGSWLGGAVANAKGG
                     VYTSANLSAYSNSIVDTPTYFAFAKGAGLMGEAGPEAIMPLTRAADGSLGVRAVGSMN
                     GSAGLVYSPVYHIAIQNDGTNGQIGPEAAGSLVQLIDQRVQAVMLSMRRDGGMLSG"
     gene            7137..7478
                     /locus_tag="JQ356_002292"
     CDS             7137..7478
                     /locus_tag="JQ356_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622364.1"
                     /translation="MAEIKTLHLVPREGMQVSEKPSVARVRFGDGYEQRRPTGLNARL
                     KTFQAVFRVTDEATRRWLEEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYS
                     DFSCTIEQVVN"
     gene            7478..8176
                     /locus_tag="JQ356_002293"
     CDS             7478..8176
                     /locus_tag="JQ356_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HAY4622365.1"
                     /translation="MQDIHEESLSESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNE
                     KGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGAT
                     VVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDG
                     ALFPGRIMLANTCMWTYRSDECGYTGGAVADEFDKPTTDIRKDRCSKCMRGCELRRNV
                     GNFGGFLSINKLSQ"
     gene            8187..8930
                     /locus_tag="JQ356_002294"
     CDS             8187..8930
                     /locus_tag="JQ356_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622366.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVT
                     GFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRR
                     THSVWRHRHWHASAFTGICNDLAAASACM"
     gene            8876..9508
                     /locus_tag="JQ356_002295"
     CDS             8876..9508
                     /locus_tag="JQ356_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001188718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY4622367.1"
                     /translation="MCLHGDLQRFGRRLSLYVNTAAEAIRALSMQMPGFRRQMNEGWY
                     QIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTA
                     GASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGRQNTY
                     FSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG"
     gene            9749..13222
                     /locus_tag="JQ356_002296"
     CDS             9749..13222
                     /locus_tag="JQ356_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY4622368.1"
                     /translation="MGKGGGRAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQS
                     ILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPESFESSGSETVLGVEVTRAKPVTR
                     TITSANIDRLRVTFGVQSLVETTSKGDRNPSSVRLLIQLQRNGNWVTEKDVTINGKTT
                     SQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNRTLWSSYTEIIDVKQCYPNTAIV
                     GMQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCL
                     WDMLTHPRYGMGKCLGAADVDKWALYAIGQYCDQTVPDGFGGTEPRMTFNAYLAQQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSAL
                     KDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTCRGQAHRAGLW
                     VIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRVLSIDAATRTLTLD
                     REVTLPETGTSAVNLINGSGKPVSVDITAHPAPDRIQVSTLPDGVETYGVWGLSLPSL
                     RRRLFRCVSVRENTDGTFAITAVQHVPEKEAIVDNGARFEPQSGSLNSVIPPAVQHLT
                     VEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLP
                     LGEYTLTVRAINSYGQQGEPATTTFRINAPAKPATIELTLGYFQITAVPRLAVYDPTV
                     QFEFWFSEAKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAF
                     VEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEI
                     TQTVSKTLEDQSATIQQIQRVQKDTNDDLAALYMLKVQKTKNGIPYVAGIGAGIEDTD
                     GQPLSNILLLADRIAMINPEDGNTTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPT
                     FSLTPEGRLTARNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKA
                     FPRDSRAPERWPSGTVTVRIYDDQPFDRQIVIPAVAFSGAKHEREHTDIYSSCRLIVR
                     KNGAEIYNRTALDNTLIYSCVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVV
                     MKKATAGISIS"
     gene            13290..13889
                     /locus_tag="JQ356_002297"
     CDS             13290..13889
                     /locus_tag="JQ356_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY4622369.1"
                     /translation="MRKVCAAILSAAICLSVSGAPAWASEHQSTLSAGYLHARTNAPG
                     SDNLNGINVKYRYEFTDALGLITSFSYANAEDEKKTHYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF"
     gene            13954..15361
                     /locus_tag="JQ356_002298"
                     /pseudo
     CDS             13954..15361
                     /locus_tag="JQ356_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000279106.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S74"
     gene            15447..15959
                     /locus_tag="JQ356_002299"
     CDS             15447..15959
                     /locus_tag="JQ356_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622370.1"
                     /translation="MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTM
                     GCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGTITNAASCGSGRLVGAVVTLSHF
                     LTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKK
                     TGVPQDLKIS"
     gene            16035..16247
                     /locus_tag="JQ356_002300"
     CDS             16035..16247
                     /locus_tag="JQ356_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001114260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HAY4622371.1"
                     /translation="MPEKFFRTDADNNDVPMTAASWMALSEATEQAMFAKGVEINTRQ
                     LQMKAEVEALTDLKAIRSYVVGWPAG"
     gene            complement(16389..16714)
                     /locus_tag="JQ356_002301"
                     /pseudo
     CDS             complement(16389..16714)
                     /locus_tag="JQ356_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414822.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            complement(16850..17098)
                     /locus_tag="JQ356_002302"
     CDS             complement(16850..17098)
                     /locus_tag="JQ356_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY4622372.1"
                     /translation="MRIEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(17453..>17799)
                     /locus_tag="JQ356_002303"
     CDS             complement(17453..>17799)
                     /locus_tag="JQ356_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY4622373.1"
                     /translation="PAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRR
                     RGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIA
                     RVRSVEEILHAL"
BASE COUNT         4198 a         4291 c         5437 g         3873 t
ORIGIN      
        1 tcctggcgga agtgcgtcag cacacctggt catccggtac caacggtgtg gtggctgcaa
       61 cgttctcact gcgtctgaaa ggcaaaccgg tgtcctttgt ggtaccgctg gcgtttgtga
      121 aaaatctgga taagacactt accgtgaata ccggtgcgct gctgacaatg tcagtcagtg
      181 ccaacggggg aatgccgccg tataaatacg cctggaagaa ggatggtcag ccggttgacg
      241 ggcagacgac agacaccttc agtaagccag gtgcgcagtc cgctgatgcg gggaaatata
      301 cctgcgtggt gaccgattcg gcagagaaag cacagagtgt gacgtctgtt gaatgcaccg
      361 tgacagtgag cgcagctgcc ggataagggg atgggtcatc atgaaaaagg atctgaaaac
      421 gctggcgctg gccagactgt cagggtttcg tcataaaacg gtgaaggtgc cggaatgggg
      481 gaatgtcagc gtggtgctgc gggagccttc ggcagaggcc tggtatctgt ggcaggaagt
      541 gctcaatggt gatggagagg atgacgatac cctgtcggtg gtggcgaaaa cccgccgtaa
      601 cttggaagcg gatgtgacgc tgttctgcga tgtcctgtgt gatacggacc tgcagcgggt
      661 gttcactccg gacgaccgtg agcaggtgct ggccgtctat ggtccggtac atgcccggtt
      721 gctgcgtcag gcactggaac tgatcgctga tgcagagtcg gccagaaaaa agtagcccgc
      781 ccggaaattc gctttctgat gcgacttgcg ctccgtctgg ggcgcacctt atccgaactg
      841 cgccacagcc tgagtgcgag cgaggcgatg atgtggatgg agttcgacag gatatccccg
      901 ctgggtgatg agcgcgggga tatccgtaat gcacagatcg tgaaagcggt tttcggggca
      961 caggggatga atgttgcact gaaggacgtc atgctctgct ggggcgagga tgaggataag
     1021 ccggaggtgg atccgtttgc ggcgctggaa gacgcgctga gctttgcagc acagtcatga
     1081 atgatgagaa ccgctgaggc ggttttttta cgcccggaga aaggtgaatg gcgacgttac
     1141 gtgaactgat tatcaaaatt gtaagcttcc ggggaactca tattgacgcg tttttcaggc
     1201 gcgcgtcatc ggcggcgcat acgaacgctc gtggtttgat aacggttgat ttattttgtt
     1261 gcacagaggc gatcgccagg caggtaccgg aggcgggctc tgaagtactg agtagcgtga
     1321 tcgcgtcagg ccgcgaagta ctgactcggg gattaattgc aggtgatgat gtactgaccc
     1381 gggaatgact ccgggctgat tcaggttctt attcgctgtc agcccgcgtg gttgctggtc
     1441 tggctcattt cctgcagtca ggagttcaac tcccgactgc aggttatggc ccggtgcacg
     1501 aacacctgac ggcaggtatc actcacccgg agaaggtaaa tccctcaaga ggcagcaact
     1561 ctgccagtcg ctcctccggc cactccggca gacgcatcag gacgtctgtc aaccaggcat
     1621 gcggctccag accgttgcgt ttcgcggttt ccagcaagct cattatttgc gcggcgcgtt
     1681 ctcccgccat ctgcgaaccg gcgaacagcc acgattttct gcccagaacc acgtttttga
     1741 tggcccgttc acacacatta ttatccagcg gcaccgcacc atcttccagg aagcggctca
     1801 gttccacgcg atgagacagc gcataggcaa tagctttgtg taatgccttt cccggagaac
     1861 attgcggttc ctgctcttca agccatgacc acagttcttc cagtatcgga cgggcataac
     1921 gctgtcgcca ctggcggatt ttttccacgg ggcggctact gatcttcttc tcaagacggt
     1981 acaaccccgc gattttcttc acggctatgg cagcccgtgg atctttactg attttataca
     2041 ggtcggcgaa gcccctgcgg gcatgggccc agcatccggc cagcgtgatc tccggcactt
     2101 tgtttgccag agtccggtaa gctttatgtc cgtcgacaac cagcgtcccg ccccagccct
     2161 gaagccagtt ttcaggatac tcatggctac gtccggtccg gcagtcgaag cacacaactg
     2221 acggtcccgt cctttctcca ctgacgtatg cccacagata accggagcag gatttaccgc
     2281 ctttcttcgt gttcaggatc ttcagggtag tctcatctgc atgcaccacc ggacggttta
     2341 tcaactcgcg atggagtaac gccgccaggg gagataatgc ggcacccgcc gcgccaacca
     2401 tgtcagccat cgaactgacg ggcagcccga catctgaacg ggcaaagacc tgttgctggc
     2461 gatacagagg caggtggtca ccgtatttat tgatgatcac ctgtgcgatg actgatggct
     2521 caacggcact tttcgggagg atatgtgccg gcatttcacc gctgaacacc ttctggcaac
     2581 agggacaact gtattgcgga cggacataac ggttcaccac aaagtgagcg ggaatatact
     2641 ccagcttttc actcaccgca tcgcggatat agtgcagcgg ctcgtcacat tcagggcaat
     2701 ggtcagtgtc cggctggatc attttttcca cccgtggaag atgaaccggt aagggtttgc
     2761 gtatcgggcg tgaacgggac gctttttcat cttcttcagg ggattgcggg agcagtttat
     2821 ccagatgtgc ggtaagcgcg gcgatatcgg catcaacatc ctcttcgaat agggagcgtt
     2881 gcataccagc cagcgtttca catttttttc cgaagcgctg ttgacgaacc agtttcagca
     2941 tttcttccag aagctggatg cgccggcttt tctccagtaa ttcccgctct ttttcggcat
     3001 tctccgacat gacttcttgt accatggcaa gtgccatagc acgcagtttt tcgatgtcat
     3061 tcgtggtgtt gagagcggag atatccatac aggggagtat accactccag atacggatat
     3121 tcattatttt tcactgagtt agcagtgtat tttgcgtgtt ttcagggcgc agttcaggtt
     3181 cattctgcca gacccatttc gtcaggtcat gtcccttaac ctgctgccag tcaacaccgg
     3241 caatcagcca gttaaactcg tcgggagtga ggtgccaggc agcgtcattt gcacgtggcc
     3301 agcggaagct gcctttgtgc agacggcggg tacacaacca caccccgtgt ttatcccacc
     3361 ggagaacttt gatacgcgaa cggactttgt taacaaagac gaaggcggct ccctcatgcc
     3421 atgtcgaccg gagttcatcc tgtatatact gcgtcagtga gtcgatgccc cggcgcatgt
     3481 caacaggttt aattgcgatg aagacattat caggactgag catatttgag tgccctgaag
     3541 acatcggtaa gttgtgacgg ctgacagcac atccgtactc caccgggaag gaagagcgtg
     3601 actggctcat tcgtgacggg ctgtggtaca tcagcatgca gtggtggcgc aatatgaacg
     3661 ggaagaacgg tcggttcatt tgcccggcgt tcagcttttg cgacatcctg cggccattcg
     3721 cgaagtgatg tgaagggaat atcgttgagt tcacagtatt gctgacgtgt aagaccactg
     3781 gcgcgccagg cagcaacgtg ctgccttttc tgttcaatgg tccatcgggg ttttgacatc
     3841 gattatctcc ggtaagttgg tgaatggatg tcggtaatac taactgaccg aagatccctg
     3901 tgaagatgac ttccccgtaa cgacactcaa aatttcggca aattcacagt cattccagtc
     3961 ggagatccag cgggcgtccc gtatgggcag tgaatattac cggaccctgc agaatggcgg
     4021 acgtcatgcc gctgctgccg cacgggaaca gcgccgcgcc cttgcagaac tgaacagtca
     4081 gttgacggaa attcgcggtt ctgctgtcgg aatggctggc gcatttgccg gtgcctttgc
     4141 caccgaacac ctgatttcgc tggccgatga gtggggttcc gtgaatgccc gtctgaaaca
     4201 ggcatctcag tcatcggatg aattctcgtc atcacagaaa gtgctgatgg atatcagtca
     4261 gcgaacaggt accgcgtttt cggataatgc ggccctgttt gcccgttcgg ctgcctcgat
     4321 gcgtgaatat ggttacagtg ctgatgatgt gctgaaggtg acggaggcca tttcgacagg
     4381 actgaaactg tcaggggctg gagttgcgga atccggttcg gtgatcaccc agttcagcca
     4441 ggcactggca cagggtgtac tgcgtggcga agaatttaat gctgttaacg aaaatggcga
     4501 ccgggtgatc cgcgcgcttg ctgcggggat gggtgtggcc cgtaaagatc tgaaggcaat
     4561 ggcggatgac ggaaaactga cagcggataa agtggtccct gcgttaatca gccagctggg
     4621 gatattacgt gatgaatatg cggccatgcc ggaaacggtt tccggtagta tcacgaaggt
     4681 ggaaaacgcc tttatggcct gggtgggcga agtgaatgag gcctgcgggg tgacaaaaac
     4741 gctctccggc gtgctgaacg gtgttgccgg acagattgat aatgtggcaa cagctgtggg
     4801 ggcgctggtt gccgtcgggg ttgcccggta ctttggcaat atggcctccg gagcgatgtc
     4861 tgccacggca ggacttgtga cggctgcacg taatgaagtt gcactggcgg aagcacagtt
     4921 caggggaacg cagattgcca cggcgcgggc aagggcagcc gtgtaccgtg ctcagcaggc
     4981 cgtggcggca gcccgcggga cggagatgca gattgctgca gaggcccgtc tggcggccac
     5041 acaggaacgc ctgaacagaa atattgctgc cagaagcgcc gcccagaatg cgctgaacag
     5101 tacaacggcg gtgggctcac gtctgatgag cggtgcgctg gggctggttg gtggcgtacc
     5161 cggactggtg atgctggggg ctgcagcatg gtacacgctg taccagaatc aggagcaggc
     5221 ctgggagtct gcgcgccagt atgcactgac gatagatgaa atcgcgcata aaacgccgtc
     5281 aatgtctttg cctgaagcct cagataatga aggacgaaca cgggcggcgc tgacagagca
     5341 gaaccggctg attgatgaac aggctagtcg ggtgaaatcc ctgcaggaaa aaatcgcagg
     5401 atatcagtat gttctggcga acccgggctg gacgaccggt gacggattca tgataaacca
     5461 tctgacctcg gtgaagaccg taacggaagg gcttgctcag gcaacagagc agcttgccgt
     5521 tgagcagtcc cgtctggcac tgatgcagga aaaagcgcag tccattcagg atgtgcttgc
     5581 cgggctggaa gaccgtcgtg tggcgttaat tcgtcagcag gcggcagagc agaataaggt
     5641 gtaccagtcc atgctggtta tgaacggtca gcatacggaa ttcaaccgtc tgctggggct
     5701 gggtaatgaa ctgcttcagc agcggcaggg actggtgaat gtgccgttac ggctgccaca
     5761 ggccactctg gatgataaac agcagagtgc cctgacaaaa acagagcgtg agctggccct
     5821 gtccagactg aaaggggaag aaaaagagcg tgtccgactg gggtatgcgg cggatgacct
     5881 cggttttgtg ggtgatccgt atcaggaggc gagacaacgt tatatcagta atgccctgga
     5941 agcctggcgc aataacgagg cgaataaacc caaatcccgg ggtggaaaat cagagacgga
     6001 aaaagcggaa gacagttttt cccggctgct gaagcagcag aaagagcaac tggcactggc
     6061 ggggcagaat acagagctgg cgaagctgaa ataccagact gcgcagggcg aactgaaaac
     6121 cctgacggag atgcagaagc aggaactgct gcgcaatgcg gccctgattg accagcaaaa
     6181 aatccgggag cagttgcggt cccgggaaga gaccctgaag aatgataatg tggctgctcg
     6241 tgcatcaaat gaagcggaac tgctggggta cgggcaggga gagcggctcc gtgaacgcat
     6301 gcgggagttg cagcagatcc gcgacagttt ccgccagaag gatgcggacc ttcagtctca
     6361 gtatcagacc ggggatatca gtgaggattt ttacagacag gctctggcac agaacgcgca
     6421 gtatctgagt gaacgtctga aagagcagga agccttttat gccgaatcgg atgtgcagcg
     6481 tgcggactgg cagaaagggc tgcaggaggg attcagtaac tgggtggata atgcgtccga
     6541 ttacgcctca caggcagcac agcttgcgac ggagggtatc tcagggatgg tgaataacat
     6601 cacggagatg ctgaacggaa ataaagtgga atggcgcagc tgggcctcat cagtgctgca
     6661 ggaaatatca aaagttctta tgaatgccgc gattgtcaac gggatcaaga cggcggcaaa
     6721 cagtatgtcc ggagcgggag gatttatcgg cagtattggt agctggctgg gcggtgcggt
     6781 ggccaatgca aaaggcggtg tgtatacctc ggcaaacctg agtgcgtaca gcaacagtat
     6841 tgtggatacg cccacgtact ttgcctttgc aaaaggggcg ggactgatgg gggaggccgg
     6901 tcctgaagcc attatgcccc tgacccgggc ggcggatggc tcgctgggtg tgcgagcggt
     6961 gggcagtatg aacggcagtg caggtctggt gtattccccg gtctaccata tcgccattca
     7021 gaatgacggg actaatggcc agatagggcc ggaagctgcg ggcagccttg tgcaactgat
     7081 tgaccagcgg gtgcaggcgg tgatgctgtc catgcgacgt gacggaggaa tgctgagtgg
     7141 ctgagataaa aacgctgcat ctggtcccgc gtgaagggat gcaggtgagt gagaaaccgt
     7201 cggtggcgag ggtacggttt ggtgacggtt atgaacagcg ccgcccgacg ggacttaatg
     7261 cccgactgaa gacgtttcag gcggtgttcc gggtgacgga tgaggcgacc cggcgatggc
     7321 tggaagagtt tttatcgtgg catggtggtt accgtgcctt tttgtggcga ccgccgaaac
     7381 ataaccggac ggtgagggtg gtatgccggg agtggagcgt cacagataac gccaggtaca
     7441 gtgatttcag ttgtacgatt gagcaggtgg tgaactgatg caggatattc acgaagaaag
     7501 tctgagcgag tcggttaaat cagagcagtc accgcgggtg gtactctggg aaattgacct
     7561 gacggtgcag ggtggtgagc ggtatttttt ctgtaatgag ctgaatgaaa aaggggagcc
     7621 ggtcacctgg caggggcgta agtatgaggc atacccgatt gacggcagcg gctttgagat
     7681 gaacggccgg ggcagcagtg ccagaccgtc gctgacggtg tccaatctgt tcggtctggt
     7741 caccgggatg gcggaagacc tgcagagtct ggtgggggcc acggtggtcc gccgccgggt
     7801 gtatgcccgt tttctggatg cggtgaattt cgttgcgggc aatccggagg cggacccgga
     7861 gcaggagctg agtgaccgct gggtggtgga gcagatgtcg cagctgacag ccatgacggc
     7921 ctcgtttgtg ctggctacac cgaccgagac ggacggggcg ctgtttcccg gtcgtatcat
     7981 gctggcgaac acctgtatgt ggacctaccg ctctgatgag tgtggttaca cgggcggggc
     8041 tgtggcggat gagttcgata aacccaccac ggatatccgt aaggacagat gcagcaagtg
     8101 catgcgcggg tgtgaactgc gcaggaatgt cggcaatttt ggcggtttcc tttccattaa
     8161 taaactttcg cagtaaatcc cgatttatga cacagactga atcagcgatt ctggcgcatg
     8221 cccggcggtg tgcgcctgcg gagtcgtgcg gcttcgtgat aagcacgccg gagggggagc
     8281 ggtatatccc ttgtgtgaat atttctgcag agccggaggc gtattttcgt atcgcaccgg
     8341 aagactggct gcgggcagag atgcaggggg agattgtggc actggtccac agtcatcccg
     8401 gtgagctgcc ctggctgagc gaggctgacc ggcggctgca gataaaaagc gcactgccct
     8461 ggtggctggt ctgccggggg gaaattcata aattccgctg tgtgccacat ctgacaggac
     8521 ggcgctttga gcacggggtg acggactgtt acacgctgtt ccgggatgca taccatctgg
     8581 cgggaattga tatgccggat tttcatcgcg aggatgactg gtggcgcaac ggccagaacc
     8641 tgtacctgga caatatggcg gtcaccggct tttaccgggt gcccctgtcc tctgcaccgc
     8701 cgggcgatat tctgctgtgc tgctttggtg cttcggtacc gaaccatgcc accatttact
     8761 gcggcaacgg tgagctgctt caccatctgc ctgaacaact gagtaaacgg gagaggtatt
     8821 ccgaaaaatg gcaacgacga acgcattctg tctggcgtca ccgccactgg cacgcatctg
     8881 ccttcacggg gatttgcaac gatttggccg ccgcctcagc ctgtatgtga acacggcagc
     8941 ggaagccatt cgcgccctgt cgatgcagat gccgggcttt cgccgtcaga tgaacgaagg
     9001 ctggtaccag atacgtattg ccggtgatga cacggcaccg gaggcggtgt atgcccgtct
     9061 tcacgaacag ctgggtgagg gaacggtcat ccacattgtg ccgcgactgg ccggggccgg
     9121 aaagggtgga ctgcagattg tgttgggggc ggcagccatc gtgggctctt tcttcactgc
     9181 cggggcatca atggcgttat ggggttcagc cctggcagcc ggtggttttt ctgccaccac
     9241 gatgctgttt tcacttggag ccagcatgat tctgggcggt gtggcccaga tgctggcccc
     9301 gaaggcaaaa acaccggatt accgcgcaac ggataacggc agacagaaca cgtacttttc
     9361 ctcgctggat aacatgattg cccaggggaa cccgatgccg gtgccttacg gggaaatgct
     9421 ggttggctcc cgccgtatat cccaggacat cagcacccgt gatgaaggcg ggggcggaaa
     9481 ggtcgtggtt atcgggcgac agggataaaa cataaaaaaa tcccgcagtg atcgcggagc
     9541 tgcggggaca gacaaatgaa gatcaatgtg aaggagttgt ttttgttact cgggcaaaaa
     9601 aacactaacg cagcgaaatt ataagcgcca cagtcagtgt gtgaaaatgt gaagatattc
     9661 agaaatttta ttccgtcatg acgcaggcac ccggtgaggt gcctgttgtt tttgtgagtg
     9721 aacaattatc acggtaagag gtgatgtaat gggcaaaggt ggcggcaggg cgcacacacc
     9781 gcgtgaggcg aaagacaatc tcaaatccac gcagatgatg agcgtgattg atgcgattgg
     9841 tgagggaccg atagaaggcc cggtgaaagg cctgcagagt attctggtga acaaaacccc
     9901 gctgacggac acggacggta atcccgtgat acacggtgtg accgcggtct ggcgtgccgg
     9961 ggagcaggag cagacaccac cggaaagctt tgagtcctcc ggctctgaaa ctgtactggg
    10021 tgtcgaagtg actagggcaa aaccggtaac acgcaccatt acgtcagcga acattgaccg
    10081 cctgcgggtg accttcgggg tgcagtcact ggtggagacc acgtcaaagg gtgaccgtaa
    10141 tccgtcctct gtccgtctgc tgattcagtt acagcgtaac ggtaactggg tgacagaaaa
    10201 ggatgtcacc attaacggca agaccacctc acagttcctt gcgtcggtga ttctggataa
    10261 tctgcctccc cgccccttta acatccggat ggtcagggag acggcggaca gcaccacgga
    10321 ccagctgcag aacagaacgc tgtggtcgtc atacaccgaa atcatcgatg tgaaacagtg
    10381 ctacccgaac acggccattg tggggatgca ggtggatgcg gagcagtttg gtggtcagca
    10441 gatgacggtg aactaccata tccgcggtcg catcatccag gtgccgtcaa actatgaccc
    10501 ggaaaaacgc acgtacagtg gtatctggga cggcagtctg aaaccggcat acagcaacaa
    10561 cccggcctgg tgcctgtggg acatgctgac tcacccgcgc tacggcatgg gaaaatgtct
    10621 gggggcggcg gatgtggaca agtgggcgct gtatgccatc gggcagtact gcgaccagac
    10681 ggtcccggat ggtttcgggg ggaccgagcc gcggatgacc tttaatgcgt acctggcaca
    10741 acagcgtaag gcgtgggacg ttctcagtga tttctgctct gcgatgcgct gtatgccggt
    10801 atggaacggt cagacgctga cgttcgttca ggaccgcccg tcggatgtgg tgtggccgta
    10861 caccaacagc gatgtggtgg tggatgataa cggcgtggga ttccgctaca gcttcagtgc
    10921 cctgaaggac cggcacacgg cggtggaggt gaattacacc gacccgcaga acggctggca
    10981 gacctccacg gaactggtgg aagacccgga agccatactg cgctacggac gcaacctgct
    11041 gaagatggat gcgtttggct gtacctgccg cggtcaggct caccgtgcag gtctgtgggt
    11101 gataaagacc ggactgctgg aaacgcagac ggtggacttc acgctcgggt cacaggggct
    11161 gcgtcacaca ccgggtgaca ttattgaaat ctgtgataac gactatgctg ggactatgac
    11221 cggcggacgt gtcctgtcca ttgatgctgc cacccgcacc ctgacgctgg accgtgaggt
    11281 taccctgccg gagacaggta catcggcggt gaacctgatt aacggcagtg gtaagccggt
    11341 gagtgtggac atcaccgcac accccgcgcc ggaccggata caggtcagta ccctgcctga
    11401 tggtgtggag acatacgggg tgtggggact ctccctgccg tcactgcgcc gtcgcctgtt
    11461 ccgctgtgtc tccgtccggg aaaacacgga tggcaccttt gccatcacgg cggtgcagca
    11521 cgtaccggaa aaagaagcca tcgtggataa cggtgcccgc tttgagccgc agtcaggctc
    11581 cctgaacagc gtcatcccac cggcagtgca gcacctgacg gtggaggtga gcgcagctga
    11641 cggccagtat ctggcacagg cgaaatggga cacgccgcgg gtggtgaagg gggtgcgctt
    11701 cagtctgcga ctgaccagcg gaagcggaga agacagccgt ctggtgacca ccgctatcac
    11761 tgcggataca gagcatcgtt tcagtggtct gccgctcggg gaatacaccc tgacagtcag
    11821 ggcaattaac agttatggcc agcagggcga accggccacc accaccttcc ggattaacgc
    11881 gccagcaaaa cccgccacca ttgaactgac gctggggtat tttcagataa cagcggtacc
    11941 gcgtcttgcg gtgtatgacc cgacggtaca gtttgagttc tggttttcgg aggcaaaaat
    12001 cgcagacaca tctcaggtgg aaacctctgc ccgttatctg gggaccggca gtcagtggag
    12061 tgtatccggc ccgcacatta agcccgggaa ggatttctgg ttttacgtgc gcagcgtcaa
    12121 cctggtgggg aaatctgctt ttgtggaggc cagtggacgg gccagcaatg atgcagaagg
    12181 gtatctgggg ctgtttcggg aaaaaatagg aaaactgcat ctggctcagg ggctgtggga
    12241 gctgatagac aacagccagc ttgcggatga gatggcggag atgaagacca ccatcaccga
    12301 aacccgcaat gaaatcacac agacggtcag taaaacgctg gaggaccaga gcgccaccat
    12361 acagcagata cagcgcgtgc agaaggacac aaatgatgac cttgctgcac tttacatgct
    12421 gaaggtacag aaaacaaaaa atggcatacc ctatgttgcc ggtattggag cggggattga
    12481 ggatactgat ggccagcccc tgagcaacat actgctgctg gctgaccgta ttgcgatgat
    12541 taacccggag gacggcaaca ccacgccgtt atttgtggcg caggggaatc agttgttcat
    12601 gaacgatgtg ttcctgaagc ggctgtttgc ggtgagtatc acctcgtccg gcaatccccc
    12661 gacgttttcc ctgacgccgg agggcaggct gaccgcaaga aatgctgata tcagcggtaa
    12721 cgtgaatgcg aactccggga cgctcaacaa cgtcacgatt aacgagaact gccgggttct
    12781 gggaaaactg tccgcgaacc agattgaagg cgatctcgtt aaaacagtgg gtaaggcttt
    12841 tccgcgggac tcccgggcac cggagcggtg gccatcaggg accgttaccg tcaggattta
    12901 tgacgatcag ccttttgacc ggcaaattgt tattccggcg gtggcattca gcggcgctaa
    12961 gcatgagaga gagcatactg atatttactc ctcatgccgt ctgatagtgc ggaaaaacgg
    13021 tgctgaaatt tataaccgta ccgcgctgga taatacgctg atttacagtt gcgttattga
    13081 tatgcctgcc ggtcacggtc acatgacgct ggagttttcg gtatcagcat ggctggtgaa
    13141 taactggtat cccacagcaa gtatcagcga tttgctggtt gtggtgatga agaaagccac
    13201 cgcaggcatc agtatcagct gaattttata acccatatac gggcgccaga aatggcgcct
    13261 tttttattgc agaaaagcga gaggtaatta tgcgtaaagt ttgtgcagcc attttgtccg
    13321 cagccatctg cctgtccgta tccggtgcgc ctgcatgggc gtctgaacat cagtccacac
    13381 tgagcgcggg gtatcttcat gcccgtacga acgctcccgg cagcgataat ctgaacggga
    13441 ttaacgtgaa ataccgttat gagtttacgg acgcgctggg gctgattacg tccttcagtt
    13501 atgccaatgc tgaagatgag aaaaaaacgc actacagcga tacccgctgg catgaggatt
    13561 ccgttcgtaa ccgctggttc agcgtaatgg cggggccgtc tgtgcgcgtg aatgaatggt
    13621 tcagcgcgta tgcgatggcg ggtgtggctt acagccgtgt gtcgactttc tccggggatt
    13681 atctccgcgt aactgacaac aaggggaaaa cgcacgacgt gctgaccgga agtgatgacg
    13741 gtcgccacag caacacgtct ctggcgtggg gggctggcgt gcagtttaac ccgaccgaat
    13801 ccgtggccat tgatattgct tatgaaggtt ccggcagtgg cgactggcgc actgacggtt
    13861 tcatcgtggg tgtcggctat aaattctgat tagccaggta acacagtgtc atgacagccc
    13921 gccagttcag gcgggctttt ttgtggggtg aatatgacag taaagatttc tggtgtactg
    13981 aaagacggca caggaaaacc ggtacagaac tgcacaatcc agctgaaagc aaaacgtaac
    14041 agtaccacgg tggtggtgaa cacgctggcc tcagaaaatc cggatgaagc cgggcgttac
    14101 agtatggacg ttgagtatgg tcagtacagc gttattctgt tggtggaggg attcccgccg
    14161 tcacatgccg ggactatcac cgtgtatgaa gattctcaac ccggtacgct gaatgatttt
    14221 ctcggtgcca tgactgagga tgatgcccgt ccggaggcac tgcgtcgctt tgaactgatg
    14281 gtggaagagg tggtgcgtaa cgcagaggag gcgaagaaga atgccggaga ggcggagacg
    14341 tcagcgagga atgccggcat atcagccagt caggcagaag agagcgctgc aaatgctgac
    14401 acttcagcag gggatgcatc ggagtcagcc cggcaggcgg cagaaagtgc agcctcagca
    14461 aagcagtcag aggaggcgtc ctcgtcctcg gcctctgcgg ccgctcaaaa agccagtgag
    14521 tcattacaaa gtgcaacaga tgctgagttg tcaaaaaaga cggcagaaag tgcagccggt
    14581 aatgcagtca gggatgcaac gaccgcaaca gaaaaagccc gggagtcagc agaaagcgca
    14641 cagtcagcgg aacaaagcag gatagcggcg gaagaggccg taaaccgaat ccccaccgtg
    14701 gtgggacctc ccgggccaaa gggggaaccg gggcccgcgg gtcctcaggg gccgaaggga
    14761 gataaaggag agcgtggcga caccggcccg gcaggggcca aaaggtgaca aaggcgatcc
    14821 gggagtggct ggaccagcag gtccggcagg tgcgccgggg ccgaaaggcg ataaaggtga
    14881 tccgggagta gcaggtccag caggtccggc ggggccacag ggaccgaagg gagacacagg
    14941 agcccccggg caaggaacag aactgcttac tactgccaat acatggactc aggcacaaac
    15001 ttttaatggt ggtattaatg gcaatttgac ggtgaccgga aacggctcat ttaacgatat
    15061 tcagatccgt tcggataaac gcaacaagcg aaatctggta aaactggata atgcgttaga
    15121 tcgtctggag gcacttactg gttatcttta cgagatacag tactctgccg acggttggca
    15181 aacgtcggtt ggtttaattg ctcaggatgc acaaaaagca ttgcctgaac tggtaactga
    15241 agacgcagac gttatatctg gtgaaaaacg tctgcgtctt aactacaacg gcataattgc
    15301 attgttagtc gagggcttta aaacacttcg tcatgagatt aaagaactcc gggagaagta
    15361 aacgacagct gttgtagttt ctggtttcta ctgaatttaa attgtggggt gacactcacc
    15421 ccacgcattc agaaggggga gatgagatgg gggtaacatc gggatgggta ggctcttcgg
    15481 ctaagagcga aacaggtgag cagtggatgg gagccgccgg aaccaaactg ggactgagta
    15541 aaccttttat gatgagccaa atggttgggc gaactatggg ctgtaaaatt gcaactgagt
    15601 actataaatg gaaatcctct gacaaggttg ataactgggg cgcagttggc gctgactggc
    15661 ctttagaaga aaaaagtaaa ggtacaatta caaacgccgc aagctgcgga tcagggaggc
    15721 tggtaggggc tgtcgttaca ctttctcact ttttgacgaa ctctacaccg acagctgctg
    15781 tttatttagc cggtggtaaa gcaggtaaca tcaccgtaaa cgtaggtggt gctacacaaa
    15841 ccatgattta tcagggcgtt gttagtgggt tccagtatta ctggtcaggt tctgttagtt
    15901 ccgctttcgt ggaggcaatg aaaaagacgg gagtacccca ggatctaaaa attagttaaa
    15961 tggtaaataa ataattttaa aaacttcacg ttctacatac cggagacgcc ggatatatag
    16021 gatattgttt taagttgcca gagaaatttt tccggacgga tgctgataat aatgatgtgc
    16081 caatgacggc agcatcatgg atggcactga gtgaagcgac agagcaggcg atgtttgcga
    16141 agggagtgga gattaataca cggcagttgc agatgaaagc cgaggttgag gcgctgacag
    16201 acctgaaggc gatccgcagt tatgttgtcg gatggcctgc tggctgaata aaaaaacggg
    16261 accacgacca gtcccggaac catgagtttt agggtattag tttgttatca tagttagcgt
    16321 gctaagtatg ccatgtcagg ttgattagtg aagtgatgtt gttcgcattt ttgcacggcg
    16381 gagaatattc agatttttgg aaatccatat ttttcccgtg cgcgattaca tgcttcattt
    16441 acgatgctat tttcgccgga cattgcgaat tccctgcatg tggacggttt ttgtaaacag
    16501 agcaatatgc gttttctccg gggggggccg gcaagagcgc cacatcgggg atttttctga
    16561 ttggtgccgc gcatacagcg atgaaaagga gatatttgct cagtgagact gaccgaaacc
    16621 tttccgccag catcgtcagc ttctgcccag taaaaagaga cgcggaaaat gcacaacagg
    16681 caccacacgt catgcatgga ttcagattgc tcataattca ccagtacagc tataaatcgt
    16741 aaagagaaca gcggtacatc gtatgtaaga acgtaccgcg gctggctggt gaacttccga
    16801 tagtgcgagt attgaatgat ttccagccgt taccgatttt acgtgctaat tagtgaacaa
    16861 accactcgtc agcagactcc caggtatctt tcagagtttc ctgaacaaaa gttttagctg
    16921 aatctttatc ggcggtgcgc gtaacagaaa ggccatcgtt gctggtagct tttacgatca
    16981 cctctacatc gtcataacgt ttactgatgc gtcgggttaa ttcttccttt aacgcatcca
    17041 cagcaccggt tggcatttta gtcatttttt ctttggctat gcagatttca atacgcataa
    17101 aagtccctct acactgtgtt tgtatacagt atcattttta actgtatgga taaacagtat
    17161 taagggtgaa ggaaagtgat tttttggggc atgcatgggg caaaaatatt tgttgtgggg
    17221 cattttgggg catgattggg acactttgtt acatatgaac tttgccgatt tttatatgac
    17281 atggaaatac aacgctttga ttcttctaaa taaaaaacat gctcttgggc gttctttagt
    17341 gatttttaaa aattccgtat cacgcagtta aagtggcggg catactcttc aaggctggtg
    17401 atccccaacc gcacccattt aggatgcgac cattgcggta gaccgatgta aatcataacg
    17461 cgtgaaggat ctcttccacg ctacgcacac gggcgatgcg cgggtagata tgattaatgc
    17521 tgttattgtg ttgctcggcg ctggcggcac tacaggcgtc ttcggcaatc accagattaa
    17581 agccaagttc ccaggcattg cgggcggtgg attcaacacc gatattggtc gagatcccac
    17641 ataacactat tgtatcgata cctcggcggc gcagttgcaa ctccagatcc gtaccgtaaa
    17701 acgcacccca ctgacgtttg atgatttcga tatcactgtc agttgcacct aatgcagctg
    17761 gatgttgcca ccagttttcg ggcaacactt tagcggggg
//
LOCUS       DADKRT010000082        17721 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.083, whole genome shotgun sequence.
ACCESSION   DADKRT010000082 DADKRT010000000
VERSION     DADKRT010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17721
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.083"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..2017
                     /gene="fhuE"
                     /locus_tag="JQ356_002304"
     CDS             <1..2017
                     /gene="fhuE"
                     /locus_tag="JQ356_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
                     /protein_id="HAY4622374.1"
                     /translation="DYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM
                     ENTLEISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV
                     VRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDG
                     KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG
                     GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVE
                     FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL
                     FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT
                     HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST
                     YASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQ
                     STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN
                     PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF
                     TRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRNFSITGTYQF"
     gene            complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="JQ356_002305"
     CDS             complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="JQ356_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HAY4622375.1"
                     /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMHDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
                     AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNH"
     gene            complement(3805..4602)
                     /locus_tag="JQ356_002306"
     CDS             complement(3805..4602)
                     /locus_tag="JQ356_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY4622376.1"
                     /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
                     PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT
                     PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
     gene            complement(4613..5617)
                     /gene="holB"
                     /locus_tag="JQ356_002307"
     CDS             complement(4613..5617)
                     /gene="holB"
                     /locus_tag="JQ356_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HAY4622377.1"
                     /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
                     SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKLNE
                     HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
                     LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPSAALALFQGDNWQARETLCQ
                     ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
                     LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
                     "
     gene            complement(5614..6255)
                     /locus_tag="JQ356_002308"
     CDS             complement(5614..6255)
                     /locus_tag="JQ356_002308"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HAY4622378.1"
                     /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
                     QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
                     LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
                     QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
     gene            complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="JQ356_002309"
     CDS             complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="JQ356_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HAY4622379.1"
                     /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
                     KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
                     ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
                     FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
                     TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
                     KEKNAQ"
     gene            complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="JQ356_002310"
     CDS             complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="JQ356_002310"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HAY4622380.1"
                     /translation="MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ
                     RLQDACQRLMIFCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
                     ILSVTVYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
                     EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
                     VQASLEEALQADEMVICNALMPVMPVRACGDVSFSSATLYEYLAPLCERPN"
     gene            complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="JQ356_002311"
     CDS             complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="JQ356_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HAY4622381.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
                     AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
                     GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKAIFGEAASRVLVSS
                     TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNLDEGCDLDFVPHEARQVSGME
                     YTLCNSFGFGGTNGSLIFKKI"
     gene            complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="JQ356_002312"
     CDS             complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="JQ356_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY4622382.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="JQ356_002313"
     CDS             complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="JQ356_002313"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HAY4622383.1"
                     /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
                     ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
                     WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
                     VAFLASDEAAYITGETLHVNGGMYMV"
     gene            complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="JQ356_002314"
     CDS             complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="JQ356_002314"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HAY4622384.1"
                     /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
                     GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN
                     FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
                     ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
                     PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
     gene            complement(11667..12620)
                     /locus_tag="JQ356_002315"
     CDS             complement(11667..12620)
                     /locus_tag="JQ356_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HAY4622385.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
                     AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSVANQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
                     AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
                     ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
     gene            complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="JQ356_002316"
     CDS             complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="JQ356_002316"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415608.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HAY4622386.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDA
                     ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRMALELVKEGRAQAC
                     VSAGNTGALMGLAKLLLRPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFELLDGGKSGTLR"
     gene            complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="JQ356_002317"
     CDS             complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="JQ356_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HAY4622387.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="JQ356_002318"
     CDS             complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="JQ356_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HAY4622388.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
                     PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEVQK
                     PNPFAVLASLKRK"
     gene            14784..15368
                     /gene="yceF"
                     /locus_tag="JQ356_002319"
     CDS             14784..15368
                     /gene="yceF"
                     /locus_tag="JQ356_002319"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
                     /protein_id="HAY4622389.1"
                     /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL
                     VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF
                     YTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL
                     FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG"
     gene            complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="JQ356_002320"
     CDS             complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="JQ356_002320"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HAY4622390.1"
                     /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRSQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
                     LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR"
     gene            16725..>17721
                     /locus_tag="JQ356_002321"
     CDS             16725..>17721
                     /locus_tag="JQ356_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISEc11 family transposase"
                     /protein_id="HAY4622391.1"
                     /translation="MKYTPVGVGIAKHVIQIHFINEHTDEVVDKQLRRQDFLTFFGNR
                     EPCLIGMEACGGSQHWARELTKLGHKVRLLQARFVKAFVMGNKNDVMDARAIWMAVQQ
                     PGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQINALHGTLLEFGETIHKGRAAMEREF
                     PEALERMKERLPPYLIMVLENQYNRLNELDSLIEDIEKQLTSVARQNETCKRLLDIPG
                     VGPLIATAAVATMGEASAFKSGREFAAYVGLVPKQTGSGGKVRLLGISKRGDTYLRTL
                     FIHGARAVALVAKEPGPWITELKKRRPASVAIVAMANKLARTVWAITAHDRKYDRN"
BASE COUNT         4425 a         4767 c         4328 g         4201 t
ORIGIN      
        1 tgattacagc gtaacgtcta cctctgcggg taccaaaatg cagatgactc aacgtgatat
       61 tcctcagtcg gtcactattg ttagccagca gcggatggaa gatcagcagt tacaaacgct
      121 gggcgaagtg atggaaaaca cgctggagat cagcaaaagt caggcggatt ccgatcgtgc
      181 tctttattat tcccgcggat tccagatcga taactatatg gttgatggta tccccaccta
      241 ttttgaatcg cgctggaatc tgggcgatgc actttctgat atggcactgt ttgaacgcgt
      301 agaagtagtg cgtggcgcga caggactcat gaccgggacg ggtaatccat ctgcggcaat
      361 tgatatggtt cgaaaacacg cgaccagtcg tgaatttaaa ggcgatgtct cggcggaata
      421 cggtagctgg aacaaagaac ggtatgtggc ggatttacaa agcccactca ccgaagacgg
      481 taaaatccgc gcgcgaattg tcggcggcta ccagaataac gactcatggc tggaccgcta
      541 caacagtgaa aagaccttct tctccggcat tgtcgatgct gatttaggcg atcttacgac
      601 gctttcagcc ggttacgaat atcagcgcat tgatgttaat agccctacct ggggcggttt
      661 accgcgctgg aatactgatg gcagcagcaa cagttacgat cgtgcacgca gtaccgcacc
      721 tgactgggcg tacaacgata aagagatcaa caaggtcttt atgaccctga agcagcggtt
      781 tgctgatacc tggcaagcga cactgaatgc cacccactct gaagtcgaat ttgacagcaa
      841 aatgatgtat gtcgatgcct atgtaaacaa agcggatggt atgctggttg ggccatacag
      901 taattatgga cctggctttg attatgtcgg cggcaccggt tggaacagtg gcaaacgtaa
      961 agttgatgcg ctggatttgt tcgctgacgg tagttatgaa ttgtttggtc gtcagcacaa
     1021 tctaatgttt ggtggcagtt acagcaaaca aaacaatcgt tacttcagtt catgggccaa
     1081 catcttcccg gatgaaattg gcagtttcta caactttaat ggcaatttcc cacaaaccga
     1141 ctggtcacca cagagcctgg cacaggacga taccacacat atgaaatcgt tatatgctgc
     1201 cactcgagtc acccttgccg atccgctgca tctgatcctc ggcgcacgtt ataccaactg
     1261 gcgggttgat acgctgactt acagcatgga gaaaaaccac accacgcctt acgctggtct
     1321 ggtgtttgac atcaatgaca actggtcgac ctacgccagc tatacctcta ttttccagcc
     1381 gcaaaatgat cgtgacagtt caggcaaata tctggctcca atcaccggta acaactacga
     1441 gctgggtctg aaatcgggct ggatgaatag ccgtctgacc accacgttag ccatcttccg
     1501 tattgagcag gataatgtcg ctcagtccac cggtacacct atccccggca gcaacggcga
     1561 aaccgcctat aaagcggtgg atgggacagt cagtaaaggg gtggaatttg aactcaacgg
     1621 cgcaattacc gacaactggc agctgacatt tggcgcaacg cgctatattg cagaggataa
     1681 cgaaggaaac gccgttaatc ctaatctgcc acgcaccacg gttaaaatgt tcaccagcta
     1741 tcggttgcct gtcatgccag agttgacagt cggcggtggt gtgaactggc aaaatcgcgt
     1801 gtataccgac accgtgacac cgtatggcac cttccgcgcc gagcaaggta gctacgcgct
     1861 ggtggatctc ttcacccgct accaggtgac gaaaaacttc tcgttacagg ggaacgtcaa
     1921 taacctgttc gacaaaacct acgataccaa catggaaggt tctatcgtct acggcgcacc
     1981 gcgtaatttc agcattaccg gcacgtatca attctgaata acacctgtaa aaaaggcagc
     2041 catctggctg ccttagtctc cccaacgtct tacggattag tggttacgga tgtactcatc
     2101 catctcggtt ttcaggttat cggatttagt accgaaaatc gcctgaacac cagaacccgc
     2161 aaccactacg cccgctgcgc ccagtttctt caggccagcc tgatccactt tagacacatc
     2221 agcaacgctg acgcgcagac gggtaataca tgcgtcgagg ttagtaatgt tttctttacc
     2281 accaaatgca gcaaccagag ccggtgccat ttcgctggta cctgttgctt ttgcatcttc
     2341 agtcgcgtct tcacgacccg gcgttttcag atccagtgct ttaatcagca cgcggaagat
     2401 ggtgtagtaa acaatcgcat aaccgatacc gacgatcggg aacagccaca gtttgctgct
     2461 gttaccagac agaacgataa agtcgatcag accgtgcgag aacgacgtac cgtcatgcat
     2521 ccccagaaga atacagattg ggaatgccag gcctgccaga atcgcgtgga tgatgtacag
     2581 gatcggcgca acgaacatga aggagaactc gatcggctcg gtgataccgg tcaggaacga
     2641 ggtcagcgcc gcggagatca taataccgcc cactttcgcg cggttttctg gtttagcaga
     2701 gtgccagata gcaattgcgg cagctggcag accgtacatt ttgaacagga agccaccaga
     2761 cagtttaccc gcagtcgggt cacccgccat ataacgcgga atgtcgccgt ggaaaacctg
     2821 acctgctgcg ttggtgtatt caccaatctg catctggaaa ggtacgttcc agatgtggtg
     2881 cagaccaaac ggtaccaggc aacgttcgat gaaaccgtaa atgccaaacg caactaccgg
     2941 gttctggtaa gcagcccact gagagaaggt ctggattgca gaaccaatcg gcggccaaat
     3001 gaaggacagc acaacgccag taaagatggc agccaggcca gaaatgatcg gcacaaagcg
     3061 tttaccggca aagaagccaa gatactcagg cagcttaata cggtagaaac ggttaaacat
     3121 gtacgctgcg atcgcaccgg agataatccc tccgagtacg ccagtatccg ctaggtgttt
     3181 agaggcgatt tcttcagcag gtaaatgcag taccagtggc gcaaccacgg ccatggtttt
     3241 aaccatgatg ccataggcaa caactgcggc cagcgcggat acgccatcgt tattggtaaa
     3301 gccgagggcg acaccgatcg caaaaatcag tggcatgttt gcaaagacgg aaccgcctgc
     3361 ttctgccata acatgcgata caacggcggg cagccagctg aaattcgcgg aaccgacgcc
     3421 cagcagaata cctgcgatag gtagtacgga taccggcagc atcagcgatt taccgacctt
     3481 ttgcaggtta gcaaatgcat tcttaaacat aattgagagt gctcctgagt atgggtgctt
     3541 tttttacgtt ctcacgcgtg gcaagggggg agagcctcgc cgtgtacagg gcatctaagc
     3601 gccctttatt tattacacag agtaaaataa ttcagtgcca atttgtttga cggctatcac
     3661 gtttcaactt cagatcattg gagaagttgc acattttgac aaaacatatg tcacaatatt
     3721 tcaaacgcgg ttattcaccg cccaattttc ggcggtgaac tttactcgtt ttagccatta
     3781 attacgagct ttaaaaaaac tcattcaacg gatggattga aggcgggaag cgtcgatgtg
     3841 aaacagacgg gcgaagttat cggtggttac ctgcgccagt tcttcaacgg caacaccttt
     3901 caacacagcc atgtattctg caacgtcacg aaccatcgca ggttgattct cttttcctcg
     3961 atgcggtacc ggcgcaaggt aaggtgagtc agtttccacc agtaatcgat ccagggggac
     4021 ataacgcgca gcatcgcgca gttgctccgc attacggaag gtcacaatgc cggaaaagga
     4081 gatgtaaaat ccgagatcca gtaatttacc cgccgtttct ctgtcctctg taaaacagtg
     4141 tagtacgcca ccgcaatccg tcactttttc ttcgcgcaga attgccagcg tatcggcacg
     4201 ggcgtcacgg gtatggacga taaccggctt gttcagttca cgaccaatct ggatatgatg
     4261 gatgaaggac tcttgctgac gtactttagt ttccggtgtg taataataat ccagcccggt
     4321 ttcacccagc gctacaacac cctcttctgc cgccagacgg cgtaaatctt ctacatcgta
     4381 gggatcattc tggttgagtg gatgcacgcc acaagaaaat acgacgttgt cacgttcgcc
     4441 taccagatcc cgcatatgta aataacccgg taatgttgtg gcgactgcca gacaaaattt
     4501 cacatcgcgt gcggcggctt tcgccagaac gtcatccacg tccttatgca aagattcata
     4561 atccagacca tcgagatggc agtgtgagtc gactaaaaac atgatgtctc tcttaaagat
     4621 gaggaaccgg tagcacaacg cccggttgca ggtaatgctc aatacgcagt aaaagatcgg
     4681 tgatgagaag ctcgcggttg atgcctgtga cagacattaa ctgttcacga atgtggcaaa
     4741 catcccccag tatagcctgc aggcgcgagg gagaaagatg gtttgccagt tcggcgacca
     4801 ggcccggcac atcaacattg gtcacctgtg cagcgccatg atggcgtttt agcgcatcca
     4861 tcagcaacgt tgccagccag tgtaaacgcg ccggagcttg ttcatgatta agggccgcca
     4921 gcagcgaata ccagtcgccc gatggtacgc tatatgccaa cgcctgacac aatgtttcac
     4981 gagcctgcca gttatctccc tgaaacaacg ccagtgccgc gctaggcgaa ccggcactta
     5041 agcgcaatgc ggcaagtaat gcatcctgtg acattgtcac ttcgcgtgaa agccaggtca
     5101 cggcgtactg ttccggcggc ggcgcaaggt aatgtaaccg acaacgacta cgtaatgttg
     5161 ccagtaaacg ttcaggctcg cgggtagcca ggaaaaacca ggtttctgct ggtggctctt
     5221 caagcgtttt cagcaatgcg ttagccgcgg cgtcggtcag taaggcagca tcggttaccc
     5281 agacaacttt cgcaccacct aggcgtgcgt gctcattcag cttttcggtg acctcacgta
     5341 ccgcatcaat gcccagcgta tttttccctt tttcgggagc cagggtgtag taatcgggat
     5401 gcgtgccagc ctgcatcaac tgacatccac gacagtgacc gcaacttttg tggccctgcg
     5461 gttgttggca gagtaaataa cggctcaggg cgtagattaa agcatcatcg cccatgcccg
     5521 gtaacgcctg aatgagtagc gcatggtgac ctcttccggc ctgatagctg gctaccagtt
     5581 tttcgaaatc aggtcgtaac catggatacc atctcatgcg tccaactcct tcacccagtg
     5641 ggtcacggta gtgcggattg catccatcac ggcctccagc ggctgggtgg catcaatggt
     5701 atgaatactt ttatcttgtg cagccagttc cagatagcgg gcgcgggtgc gattaaagaa
     5761 atcgaaagac tcttgctcaa tacgatccag ctcgccgcgc gcacgcgcgc gttttaagcc
     5821 aacttccggg gtaacatcga gatagagcgt taagtcaggg cgaaaatccc cgagaacagc
     5881 atcacgcagt gttgccagca tatgttggtc aataccacgt cctccgccct gatacgcctg
     5941 agtggagaga tcgtggcgat cgccaatcac ccaggtgccg ttagccagag ctggtttgat
     6001 gaccgtttct accagttgaa cgcgcgcggc ataaaacatc agaacttcgg ctttatcggt
     6061 aatgacttca tcgcctaccg atttgatatc cagcaccagg cttcttaact tttcggcaag
     6121 ttgcgtaccg ccaggttccc gagtgaaaac catgtcgcgg atacccagtt gctcaagcgt
     6181 ctcaaccacc acattacgcg cggtagtttt gcctgcgcct tccagcccct caatgacgat
     6241 atacttactg cgcatttttt tccttaagca ctttcagata atcctgcaca gacttgttat
     6301 ggctggcaag attggtatta aacgtgtgac cacctttacc atcggccaca aaatagagat
     6361 acggcgtttt tgccggatgc gcagcagcct tcagcgaatc cgcccccggc gtagctatcg
     6421 cacctggcgg caaaccggta atggtatagg tgttatacgc tgtcggcgtt tccaggtctg
     6481 cacgagaaag tttgccatta taacgctctc ccatcccgta aatcacggtt gggtcggtct
     6541 gcaggcgcat accaatgcgt aaacggttga taaataccga ggcaacctga tcgcgttcac
     6601 tggcaacggc ggtttctttt tcgataattg atgccatcgt caccagctgg tttttatctt
     6661 tataaggcag gccgtccgca cgcccttccc aggcgctatc gaccgctttc accattttct
     6721 tgtgcgctcg cttgagtaac gcgacatcgg tggtattggc ggtatacatc caggtgtctg
     6781 gccagaacca accttcaatc cactccgggt tttccagttc aagtgcctgc gctacggtgg
     6841 cgtacttatc gtcactcagc gtgtgcttga tatacggagc ctcacgcaat tgcttgaggt
     6901 agtcgctcag acgcatccct tctaccagtc gcagcgggaa ctgtgcttct ttaccgcttt
     6961 ccagcaattt cagcatctcg cgcacggtca tctgcggtgt aaagcggtaa gtcccggctt
     7021 taaagtgaga aagatccggt tcgatacgca gcaaccattg aaaaacccgt gggcgattga
     7081 tgatcttatc ggcataaagc tgttcaccaa gcgccagacg tccggtccct ggcttcaggg
     7141 taaatatcgt ctcttctttg ataagcaatt tgctgtcggc aagatggcga accttccaga
     7201 cgcccacacc agcggcgata cccagtacca ccagcaataa caagataatc aataacactt
     7261 ttttcatgac taattcgggc gctcacaaag tggggctaaa tattcatata acgttgctga
     7321 cgaaaaggag acatcgccac aggcacgtac gggcatcact ggcattaacg cattacaaat
     7381 aaccatctca tctgcctgca acgcctcttc cagagaggct tgcacttcga caagctgata
     7441 agaggattgt gccagcaaac ggatacagaa ttgtcgcata atgccgttaa cacctgcctg
     7501 atccagtcgc ggcgtataaa ctacattgcc cttccgccag aacaaattag ccgcacagca
     7561 ttccgtaacc cacccttcgc tgtcaaggac cagcgcctca tcagcgtttg tctgctcaag
     7621 atgagagcgg atcaatactt gctcaagccg attaagatgt ttaatacctg caagatgggg
     7681 attgcgcccc agccgcaccg ggcttagcgc caacgtcatc ccttcgttac gcaaacggtc
     7741 gtaatgtgca ggataaaccg taacggagag aatccgcgtt gccggtccac tgttcaatgt
     7801 gctgtaccct cgcccgccac taccgcgact gatcacgact ttcagcacac cattttgctg
     7861 ttctgctgcc agcgttttca tctcttgttc aagctgaggc cagaagtcac agaaaatcat
     7921 caaccgctga caagcatcct gtagtcgctg gatatgcgcc gataacaaac tgactttacc
     7981 gtcgataact ctggcggtgg taaaacaacc atcaccaaac tgcgttgccc gatcgcttac
     8041 tgccagcgat tcctgcttat gaccgttaat taagaacata ccggctcctt atcagagaat
     8101 tgttagtgtg gcagcatgct cactacggaa caagtcggaa taaaagctaa gaaaaaaggc
     8161 ccgcaagcgg accttttata tgggtgggaa atgacaactt agatcttttt aaagatcaaa
     8221 gaaccattag tgccaccgaa gccgaaggag ttacacagcg tgtattccat tccgctgacc
     8281 tgacgtgctt catgcggtac gaaatccaga tcgcaacctt catccaggtt atccaggttg
     8341 atggttggcg gaacagcctg atcgcgcagc gccaggatgg agtagataga ctctactgcc
     8401 cccgccgcac ctaacaggtg accggtcata gatttcgtgg agcttaccaa cacacggctt
     8461 gcagcttcac cgaagatggc tttcaccgcc tgcgcttcag ctttatcgcc agccggcgta
     8521 gaagtaccgt gcgcgttaac gtagccaatc tgactcgctt caatgcctgc atcacgcaga
     8581 gcatttgcca ttgccagagc tgcgcctgcg ccattttctg gcggtgacgt catatgataa
     8641 gcatcgctgc tcataccaaa gccgacgagt tcagcgtaaa ttttcgcacc gcgttttttc
     8701 gcgtgttcgt actcttctag taccagcata ccggcaccat cgcccagtac gaagccatca
     8761 cgctctttat cccacgggcg gctcgccgct tgcgggttat cattgcgggt agataatgca
     8821 cgtgccgcgc caaaaccacc aacgcccagc ggcgtactgg ctttctctgc gccacctgca
     8881 accatcacgt cagcatcgcc atacgcgata atacgcgcag catgaccaat gttgtgcacg
     8941 ccggaagtac aggcggtcgc gatagagatg cttgggccac gcaggccata catgatagtc
     9001 agatgacctg ccaccatgtt cacaatcgtt gacggaacga agaatgggct gatcttacgt
     9061 ggaccaccgt tcatcagaga tgtgtggttt tcttcgatca gtccgaggcc gccaatcccg
     9121 gagccaattg cggcaccaat gcgggttgcg ttctcttccg ttatttcaag gccagaatcc
     9181 tgcatggcct gaacgccagc gacaattcca tattgaatga aggcatccat cttgcgctgt
     9241 tctttgcgcg agataatgtc ctcacagtta aaatccttta ctaagccagc aaatttcgtt
     9301 gcataggcgc tagtatcgaa atggtcgatt aggctgatgc cactctgacc ggcaagcaga
     9361 gctttccagg tagactctac ggtattgccg acaggagaca acatgcccag tccggtcaca
     9421 actacacgac gcttagacac gtttgtcctc cagggaggga aaaaatgatt ctagtgggac
     9481 aaaaagataa aactcaggcg gtcgaacgac cgcctggaga tgttcactta cgcctggtgg
     9541 ccgttgatgt aatcaatggc agcctgaacg gtggtgattt tctcagcttc ttcgtccgga
     9601 atctcagtat caaactcttc ttccagagcc attaccagct caacggtgtc aagagaatcc
     9661 gcgcccaggt cttcaacgaa agaagcattg ttggtaactt cttcctgctt aacgcccagc
     9721 tgttcgccga taattttctt aacgcgttct tcgatagtgc tcatactctt aaatttccta
     9781 tcaaaactcg ctttcgcgat ggttttcgta gtgtataaaa tgttgaaaaa tttgcaacta
     9841 aatcccggca ggtcttacca cgattttacg ttattttgag gccttacccc ccaataacgc
     9901 aaatcatttt gcactaatta ttactcataa ccacgcagac tgcgcgcaac atgagcattt
     9961 tgtgcaaatc gcggtcagac catgtacatc ccgccgttca catgcaaagt ttcacccgtg
    10021 atgtaagctg cttcgtcgga tgccaggaat gcaaccgcgt tggcgatttc ctgtgcgccg
    10081 ccgaggcgac ccgcaggaac ctgcgccagg atacccgcac gctggtcatc gctcagcgca
    10141 cgtgtcatgt ccgtttcaat aaagcccgga gcaacaacgt ttacagtaat accgcgtgac
    10201 gcaacttcgc gcgccagtga tttactgaag ccgatcaagc ccgctttcgc cgcagcgtag
    10261 ttggcctgac cgccatttcc catggtacca accacagaac cgatagtgat aatacgacca
    10321 tgacgctttt tcatcatagc gcgcattacc gcttttgaca gacggaaaac agatgaaagg
    10381 ttggtttcga taatatcgtt ccactcttca tctttcattc gcattaacag gttatcacga
    10441 gtgataccgg cattattgac caggatatcc acttcaccaa attctgcgcg aattttttcc
    10501 agaacagatt cgatagatgc cgggtcggtc acattcaaca tcagaccttt gccgttagca
    10561 cctaaataat cactgatcgc ctgagcgcca ttttcactgg tcgcagtgcc aataactttc
    10621 gcgccacggg ctgcgagcgt ttcagcaatt gcgcggccaa ttccgcggct tgcaccggtt
    10681 accagtgcga tttttccttc aaaattcatg attttcctct tttaaagctc gagcgccgct
    10741 gccatcgctg aaggttcgtt cagcgccgag gcggtcaggg tgtcgacaat gcgtttcgtc
    10801 aggccagtta gcactttgcc cgggccgact tcatagagat gttctacgcc ttgcgctgcc
    10861 atgtactcaa cagacttcgt ccactgaacc gggttataca actgacgtac cagtgcgtca
    10921 cgaatggcat caccattggt ttcgcatttc acatcaacgt tattcacaac aggaactgtt
    10981 ggtgcgttaa aggtgatttt cgctaattct actgccagtt tgtcggctgc tggtttcatc
    11041 agcgcacagt gagacggtac gctcactggt aacggcagcg cgcgttttgc gcccgcagct
    11101 ttacaggcag cgccagcacg ctcaaccgcc tctttatgac cggcaataac cacctgtccc
    11161 ggagagttaa agtttaccgg agaaacgacc tgaccttctg cagcttcttc acacgctttc
    11221 gcaatagacg catcatccag accgatgatt gccgccatag cgcccgtgcc ttctggtacg
    11281 gcttcttgca tgaacttgcc gcgcatctca accagacgca ccgcatcagc gaaatcaatc
    11341 acgccagcgc aaaccaacgc ggagtattcc cccaggctgt gaccggccat cattgccggt
    11401 gctttaccgc cctgctgctg ccatacgcga tacagcgcaa cagatgcagt caacagcgct
    11461 ggctgggttt gccaggtttt attcagttct tcagctggcc cctgctgggt cagcgcccac
    11521 aggtcgtagc ccagcgccgc agaagcttca gcaaacgttt cttcgacaat tggatagctc
    11581 gccgccatat cagccagcat tccaacggtt tgagaaccct gtccagggaa cacaaatgca
    11641 aattgcgtca tgttttaatc cttatcctag aaacgaacca gcgcggagcc ccaggtgaat
    11701 ccaccgccaa aggcttcaag cagaaccaac tgccccggct taatgcgccc gtcgcgtaca
    11761 gcttcatcca gcgcgcacgg gacagaggcc gcagaggtat taccgtggcg atccaacgtc
    11821 accacgacat tgtccataga cataccgagt tttttcgccg ttgcactgat aatacgcagg
    11881 ttagcctgat gcggaaccag ccagtccagt tgagaacggt caagattatt cgccgccagc
    11941 gtctcatcaa cgatgtgcgc cagttccgtt accgcaacct tgaagacttc gttgcccgcc
    12001 atcgtcagat gaattgaatt ctctggattc acgcggtcgg cgtttggcag cgtcagcaat
    12061 tcaccataac taccgtcggc atgcagatgg gtggagatga ttcccggctc ttcagaggca
    12121 gccagcaccg cagcgcccgc gccatcgcca aaaataataa tagtcccacg atctgttgga
    12181 tcgcaggtgc gcgccagtac atcggaaccg acgaccagag catacttcac cgccccagat
    12241 ttcacgtatt gattggctac gcttaatgca taggtgaaac ctgcgcaggc tgctgcaacg
    12301 tcaaatgccg ggcaaccttt aatgcccaac atgctttgaa tctgacaagc tgcgctcggg
    12361 aaagcgtgcg tagcagaagt cgttgccaca acgatcaggc caatctggtc tttctcaatg
    12421 cccgccatct caattgcgcg tgtcgccgct tcaaagccca tggttgaaac ggtttcgttt
    12481 ggcgcggcaa tgtggcgttc gcggataccg gtacgagtga caatccactc gtcagaggtg
    12541 tccaccattt tttccaaatc ggcgtttgtc cgcacttgtt cgggcagata gctgccagta
    12601 ccaataatct tcgtatacat gtacgctcag tcacttttcg gttatatacc gtcacttgca
    12661 aactgcgagt tcgctggcag cgtcctgcta ccgcagagtt ccgcttttgc caccgtccag
    12721 cagctcaaaa ccagctgggt atacagattc caggcgagcg gcaattcgct gaggaacttg
    12781 tcgctgcacc gcctgcactg cctgttcaat cgcgaccgca aaagctcgct gattggctgc
    12841 accatgactt tttatcaccg tgccgcgcaa tcctaacaga caggcgccgt tatactggtc
    12901 ggggttgagg tgactgaatc gcctcgtcag gctcttttgt agccaacgct ttaataacag
    12961 tagccaccac gaccgttttt tcccttcacc ctgagatttc agcagagaaa ggaacatcct
    13021 gacaacacct tccatcgtct ttaacgtgac atttcctgta aagccgtcac aaaccagcac
    13081 atctgtcttg ccagttaaca actcattggc ttcaagatag ccgatataat tgatagaagg
    13141 gattgtttta agcaccgctg aggcatcccg aatactgtcg agacccttta cttcttcttc
    13201 accaatattg agcaacgcca cgcgaggatt gggaatttcc accacctctt cagccagaac
    13261 tgagcccata atggcaaatt gcaccaacat tgtgctgtca caatcgacgt tggcccctaa
    13321 atcgaggacc accgttttgc ccttttgctg atgtggtaat accgtcacca gcgccggacg
    13381 ctcaatcccc tccaggggcc tgagtaataa ttttgccagc cccatcagtg ccccggtatt
    13441 accggcactg acacaggctt gcgctcgacc ttctttcacc agctccaggg ccatacgcat
    13501 tgaactccca cgactagcgc ggatagcttg cgaaggccgg gcatcactgg cgataactga
    13561 ctgcgcagga ataatctgca gacgcgaacg ttgttcaaag tcagctttag caagtaatgg
    13621 cgtgatggcg tcgggattgc cgactaaaag aagagtgagt tgcgaattag aattcagtgc
    13681 ctgcaatgct gcaggcactg tcacggaagg gccaaaatcc cctcccatga catctaacgc
    13741 cagggttaga cgtgtcaagg tatcgtcgcc gcccggtttg gtctttcccc agttgcctgg
    13801 ggaaaatcct cactaagctt catcacgcag acgcgtgatt acttagcgat gaccttgcgg
    13861 ccgcggtagt aaccgtcggc agtgatatgg tgacgcaggt gtttttcacc agaagttttg
    13921 tctacagaca ggctggtgac tgcggtcagc gcgtcatggg aacgacgcat gccacgtttg
    13981 gaacgggttg gtttattctg ttgtacggcc atggacctta ctcctcaatt acggtttatc
    14041 cccgatccaa cggggagcac caattactta cgctttaagc tggctaatac ggcaaatggg
    14101 tttggctttt gcacttcttc aggcagttca ccaaagacca tgtccgcttc ggacacttca
    14161 cagtgttcag aatcatgcac cggaactacc ggcaaggcga ggatgatttc atcttcaacc
    14221 attgcaagca gatcgatttc accgaattcg ttaacctcaa tcggttcata cgcttccggc
    14281 agtgcttcag cctgttcgtc tgaacgcaca ggactaaaac aatacgttgt gtagacctga
    14341 tgagtaaacg gcttcccgca acgctgacac tcgagcgtta ccgtcacctt cgcatcgccg
    14401 tttaacactg cgagacgttg gttatcgata gcgaacgaca tggagcattc cacatcactg
    14461 tccacactga ctacggattc ggcgacgcgc tcaacctgat caggggtata gataccctgg
    14521 taatcaaggc gtttttgagc cgtacgaacc ggatcgagag tcaggggtaa ttttaccttt
    14581 tgcatagggc gcgcatatta actttgtaac gtcatagagt caaagaaaaa ggcagcctgt
    14641 ggttgccttt tgccaataat tcgcacacat tgcgggttac tgctttattt tcgttcagtg
    14701 ctgataacga acatcaacct gcaaaacgaa gcgcatagtt taaaatggct atcatcaata
    14761 cgctatatct gatggaaaaa aatatgccta aacttatttt agcctccacc tcgccatggc
    14821 gtcgcgctct tctggaaaaa ctgcaaatct cttttgaatg tgcagcacca gaggtcgacg
    14881 aaaccccacg cagcgacgaa tcaccgcgac agttggtgct tcgactggca caagaaaaag
    14941 cgcaatctct ggcgtcacgt tatccggatc atttaattat tggttcagac caggtatgtg
    15001 ttcttgatgg cgaaatcacc ggtaaaccgt taacggaaga aaatgcccgt ctgcaattac
    15061 gcaaagccag cggcaatatc gtcaccttct atactggact ggcgttgttt aattcggcga
    15121 atgggcatct acaaacagaa gtggagcctt ttgacgtcca tttccgtcac ctgtgcgagg
    15181 cggagattga taattacgtg cgtaaggagc atcccctgca ctgcgcgggt agctttaaga
    15241 gtgaaggatt tggcattacg ctgtttgagc gtttagaggg acgtgaccct aacacgctgg
    15301 ttggtttacc gctaatcgcg ctgtgtcaga tgttacgtcg ggaagggaaa aacccgctga
    15361 tgggatagtt gtttgcgccg gatgcggtta cgtcgcatcc ggcaatcggt gcaggcggcc
    15421 tgatgcggcg taaacgcctt atcaggccaa ccgcccatta tcaggcttat atgcttgtat
    15481 tagcgcgcgt tacgcagctt ttgcaaacaa cgcttcaaac cttcatccat cggcgcttcg
    15541 atacgcatca cctcaccggt ccccggatgg gtaaacttca acgctgcggc gtgcaggaac
    15601 agacgattta atcccgtgcc tgcttcagtg agctgtctgt caaattcacg gtcaccgtag
    15661 cgatcgtcaa aggcaatcgg atgacccgca tactgtgtat gcacacggat ctgatgagta
    15721 cgtccggtta ccgggctaca acgcaccagg gtggcaaatg catagcgttc ttccacttta
    15781 aagcgtgttt ccgacggttt gccttcctga ctgacacgca cgatacgttc gccgctttgc
    15841 agaatatttt tcaataacgg cgcttgaacg ctcttcacat gcgactgcca ctgactgcgc
    15901 accagcgcca agtaatcttt ttgcattcct ttttcacgta attgctcatg cagagaacgc
    15961 aacgccgagc gttttttcgc taccagcaac acacctgaag tgtcccggtc gagacgatga
    16021 accagttcaa ggaaccgcgc ttccgggcgc aacgcccgca aaccttcgat aacgccgaag
    16081 cttaaaccac tgccgccatg taccgccgta ccggaaggtt tattcagcac caggatatga
    16141 tcatcttcat ataagatgac gtccgccagc gccgccacct tttgcagatg tggcgaaacc
    16201 gcctcttctt cccgctcagc aacgcgaacc ggtgggatac gcacctcatc acccgcttcg
    16261 agtttatatt caggcttaat acgttttttg ttcacccgca cttcgccttt acgcaaaata
    16321 cggtaaatca tactttttgg tacgcctttc aattgggtac gcaaaaagtt gtcgatacgt
    16381 tgccccgctt cgtcagcggt gatagcaaca atttttacgg atggagtctc tgttttcatg
    16441 gtgggcgatt ctaattagcc aacaggattc gcgccactca tttttctatg cttatattta
    16501 gttttacacc ttattacttc actacgtgat cactttattg atggttatta aaccaatcac
    16561 cagcaagaag tgaaaaatgt aatgaacgca tcccacacaa ttaaacacgg agcagtatga
    16621 tggttaaaag ggtgaaactg gcaggtgtgg agcctcgcag atttccggca tcatagtgcc
    16681 caatacggga tgcataaagc tccctcagac tggagactcc acaaatgaaa tatacaccgg
    16741 ttggcgttgg tatcgcaaaa catgtcattc agattcactt catcaatgag cacacagatg
    16801 aagtggttga taaacagttg cgtagacagg attttctgac gttcttcggc aaccgtgagc
    16861 catgcctgat tggtatggag gcctgtggag gttctcagca ctgggcacgg gaactgacaa
    16921 aacttggtca taaagtccgg ttgttgcagg cccgcttcgt taaggcattc gtcatgggca
    16981 ataagaatga tgtgatggat gcccgggcta tctggatggc ggttcagcag ccgggtaaag
    17041 aaatcgccgt aaaaacagaa gaacagcagt cggtactggt tctgcaccgt acccgcatgc
    17101 aactggtgaa gttccggacc gcacaaatta atgccctgca cgggacgtta ctggagtttg
    17161 gtgaaaccat ccacaaaggc cgggcagcga tggagcggga gttccccgaa gcactggaac
    17221 ggatgaaaga gagactgcca ccgtatctca ttatggttct ggaaaaccag tacaaccgac
    17281 tgaatgagct ggactcactg atagaggata ttgaaaaaca gcttaccagc gtggcgaggc
    17341 agaatgaaac ctgtaagcgg ttgctggata ttcctggcgt tggaccactt attgcgacgg
    17401 cagcggtggc caccatgggg gaagcatcag cgtttaaatc ggggcgagag ttcgccgcat
    17461 atgttggtct ggttccaaaa caaactggct ccggagggaa agtacgtctg ctggggataa
    17521 gcaaacgtgg tgacacttat ctcaggacat tatttatcca cggtgcaaga gcggtggcat
    17581 tagtagctaa agagcctggc ccgtggataa ccgaactgaa aaaacgtcgt ccagccagtg
    17641 tggcaatcgt cgccatggca aacaagctgg cacgaacagt atgggcgata accgcccatg
    17701 accgtaagta tgacaggaac c
//
LOCUS       DADKRT010000083        17694 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.084, whole genome shotgun sequence.
ACCESSION   DADKRT010000083 DADKRT010000000
VERSION     DADKRT010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17694
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.084"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..224)
                     /locus_tag="JQ356_002322"
     CDS             complement(<1..224)
                     /locus_tag="JQ356_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HAY4622392.1"
                     /translation="MTWNLLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINIL
                     FTSRQMIIETFICPVSSISNPDEFNTFLLR"
     gene            complement(351..1082)
                     /gene="rlmB"
                     /locus_tag="JQ356_002323"
     CDS             complement(351..1082)
                     /gene="rlmB"
                     /locus_tag="JQ356_002323"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HAY4622393.1"
                     /translation="MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALE
                     AQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLVRT
                     MRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRS"
     gene            complement(1263..3704)
                     /gene="rnr"
                     /locus_tag="JQ356_002324"
     CDS             complement(1263..3704)
                     /gene="rnr"
                     /locus_tag="JQ356_002324"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HAY4622394.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVEL
                     HIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEA
                     GVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQG
                     DQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAECRIERIEQT
                     QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYY
                     RFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGDAGKKGGKRRLVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIA
                     AATKAKRAAKKKVAE"
     gene            complement(3743..4168)
                     /gene="nsrR"
                     /locus_tag="JQ356_002325"
     CDS             complement(3743..4168)
                     /gene="nsrR"
                     /locus_tag="JQ356_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HAY4622395.1"
                     /translation="MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVK
                     IINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(4373..5671)
                     /gene="purA"
                     /locus_tag="JQ356_002326"
     CDS             complement(4373..5671)
                     /gene="purA"
                     /locus_tag="JQ356_002326"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HAY4622396.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(5775..5972)
                     /locus_tag="JQ356_002327"
     CDS             complement(5775..5972)
                     /locus_tag="JQ356_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HAY4622397.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(6054..7058)
                     /gene="hflC"
                     /locus_tag="JQ356_002328"
     CDS             complement(6054..7058)
                     /gene="hflC"
                     /locus_tag="JQ356_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HAY4622398.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNK
                     PLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
                     "
     gene            complement(7061..8320)
                     /gene="hflK"
                     /locus_tag="JQ356_002329"
     CDS             complement(7061..8320)
                     /gene="hflK"
                     /locus_tag="JQ356_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HAY4622399.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTYPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKV
                     LGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASN
                     TSSTSQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(8406..9686)
                     /gene="hflX"
                     /locus_tag="JQ356_002330"
     CDS             complement(8406..9686)
                     /gene="hflX"
                     /locus_tag="JQ356_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HAY4622400.1"
                     /translation="MFDRYDAGEQAVLVHIYFTKDKDMEDLQEFESLVSSAGVEALQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT
                     EARVYAADQLFATLDPTLRRIDVADVGETILADTVGFIRHLPHDLVAAFKATLQETRQ
                     ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEE
                     NKPIRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI"
     gene            complement(9763..10071)
                     /gene="hfq"
                     /locus_tag="JQ356_002331"
     CDS             complement(9763..10071)
                     /gene="hfq"
                     /locus_tag="JQ356_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HAY4622401.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
                     "
     gene            complement(10157..11107)
                     /gene="miaA"
                     /locus_tag="JQ356_002332"
     CDS             complement(10157..11107)
                     /gene="miaA"
                     /locus_tag="JQ356_002332"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HAY4622402.1"
                     /translation="MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA
                     LIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATR
                     QLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAITG"
     gene            complement(11100..12947)
                     /gene="mutL"
                     /locus_tag="JQ356_002333"
     CDS             complement(11100..12947)
                     /gene="mutL"
                     /locus_tag="JQ356_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HAY4622403.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDI
                     DIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT
                     AFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL
                     ETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPN
                     AQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLE
                     RDGNISLLALPVAERWLRQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSALEKAQSALA
                     ELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLM
                     SEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE"
     gene            complement(12957..14294)
                     /gene="amiB"
                     /locus_tag="JQ356_002334"
     CDS             complement(12957..14294)
                     /gene="amiB"
                     /locus_tag="JQ356_002334"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HAY4622404.1"
                     /translation="MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFI
                     GDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDL
                     TENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNP
                     FKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNV
                     TIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNR
                     SATGASVWVLSNRRANSEMASWLEQHEKHSELLGGAGDVLANSQSDPYLSQAVLDLQF
                     GHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEE
                     RLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN"
     gene            complement(14313..14774)
                     /gene="tsaE"
                     /locus_tag="JQ356_002335"
     CDS             complement(14313..14774)
                     /gene="tsaE"
                     /locus_tag="JQ356_002335"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HAY4622405.1"
                     /translation="MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG"
     gene            complement(14746..16293)
                     /gene="nnr"
                     /locus_tag="JQ356_002336"
     CDS             complement(14746..16293)
                     /gene="nnr"
                     /locus_tag="JQ356_002336"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HAY4622406.1"
                     /translation="MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLR
                     AGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLFAQESDKPLP
                     EEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
                     PAPIVAVDIPSGLLAETGATPGAVINADHSITFIALKPGLLTGKARDVTGQLHFDSLG
                     LDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEA
                     ALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQE
                     WGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGA
                     LLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHD
                     ESSNSAP"
     gene            16292..17431
                     /gene="queG"
                     /locus_tag="JQ356_002337"
     CDS             16292..17431
                     /gene="queG"
                     /locus_tag="JQ356_002337"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HAY4622407.1"
                     /translation="MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWL
                     DKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVS
                     RYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEELRPLMGNRIYGCDDCQPICPWNRYSQLTTEEDFSPRKPLHAP
                     ELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGGH
                     PLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA"
     gene            complement(17414..17467)
                     /locus_tag="JQ356_002338"
     CDS             complement(17414..17467)
                     /locus_tag="JQ356_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622408.1"
                     /translation="MRFYFYSQAVDESGVTR"
BASE COUNT         4069 a         5011 c         4394 g         4220 t
ORIGIN      
        1 tttcttaata agaaggtatt aaattcatct ggattgctga tactacttac cggacaaata
       61 aaggtttcga taatcatttg gcgggaagta aaaagaatat tgatttgcaa atcgccataa
      121 tcattcattt taataattaa tgcgttctcg ctatttgtta catcaatatt ttgttcaggt
      181 acagtttgca gcgccgtcgc cagcgccaac agattccatg tcatatatta ttccatatag
      241 atttagttta aatattaata aaatgaatat ttgcagtacg taattatctt accagctata
      301 gacaaaaaaa aaccatccaa atctggatgg cttttcataa ttcagaggaa ctagctgcgc
      361 tgacgcaccg cttcaaataa gcaaattccg gttgcaaccg aaacgttcag agaagaaaca
      421 cttcctgcca ttgggatgct gatcaactca tcgcaatgtt cacgggtcag gcgacgcata
      481 ccttcacctt ccgcgcccat caccagcgcc aggcgtccgg tcattttgct ctgatagagt
      541 gtatgatccg cctcacctgc cgtaccgacg atccagatat tctcttcctg caacatacgc
      601 atggtacgca ccaggttagt cacccgaatc agcggaacgc tttctgccgc gccacaggcc
      661 acttttttcg ccgtggcgtt gagctgggcg gagcgatctt tcggcacaat caccgcatga
      721 acaccagcgg catctgcgct acgcaggcac gcgccgaggt tatgcggatc ggttacaccg
      781 tcaaggatca gcaggaacgg ctgatcgagc gaagcgatca gatccggcaa atcattttcc
      841 tggtactgac gtcctggctt cacgcgggcg ataatgccct gatgcacggc accgtcgctt
      901 ttctcgtcga gatattggcg gtttgccagc tggataacca cgccctgggc ttcgagggcg
      961 tgaatcagcg gtaacagacg tttatcttca cggcctttta aaataaagac ttcctgaaaa
     1021 cgttcagggg cgcgctccag cagggcctgc actgcgtgga tgccgtaaat catttcgctc
     1081 attaatgtac tcgttgttta cgttttgcct gatgcactac gtttatccgg cctacatgat
     1141 ctctgcaata tattgaattt gcgtgattat gtaggccgga taaggcgttc acgccgcatc
     1201 cggcatgaac aaagcgcatt ttgtcagcaa tctaaccctc ttctgtttga agagggtaat
     1261 gatcactctg ccactttttt cttcgccgca cgcttcgctt tggtcgctgc agctattttc
     1321 tgcgttttcg ccgatggctt tttcgctttt ctcgcgtctt tcttcgctgc tttcggcttc
     1381 gtttttttct caccgcggaa ggcgctgtct ggctcaaagt ttaccttttt accgaccaga
     1441 cgacgcttgc cgcctttttt acctgcatcg ccttttttcg ctttctcgcg cgccgtttta
     1501 ccgacgttgc gcggtgcgcg ttcgctggag atcaggctaa agtcgatttt gcgctcgtcc
     1561 atattaaccg cttcgacgcg aacttccacg cgatcgccca gacgataagt ctggccgctg
     1621 gattcaccca tcagccgttg ccctacctgg tcaaagcgat agtagtcatt gtccagcgaa
     1681 gagacatgga ccagaccatc aatgaataag tcgtccagac ggacaaagaa tccaaagcca
     1741 gtgacgctgg aaattacgcc tttaaagacg ttacctacct ggtcgagcat gaagtcacac
     1801 ttcagccagt cagccacatc gcgcgttgct tcgtcggcac gacgttccgc catcgaacag
     1861 tgctgaccca gttgcagcat ttcttccatc gaataatggt agccgccggt ttcagtggtg
     1921 ttgccctgat gcccctgctc tttcgccagc agatatttaa tggcgcggtg cagcgtcagg
     1981 tctggataac gacgaatcgg cgaagtaaag tgcgcatagg actgcaatgc caggccaaag
     2041 tgaccacggt tttctggatc gtaaatcgcc tgtttcatcg agcgcagcag catggtttgc
     2101 agcatttctg catcaggacg atcggcaacc gactccagca gctccgcgta gtcacgcggt
     2161 tccggcttgt taccgcccgg cagttccagc cccagctccg ccagtactga acggaaagag
     2221 gtaatcgctt cggtgctcgg cttgtcgtga atacggaaca atgctggttc tttggctttc
     2281 tcaacgaaac gcgccgccga gatattcgcc agaatcatgc actcttcaat taacttgtgt
     2341 gcgtcgttac gctgagtctg ttcgatacgc tcaatacggc attcagcgtt gaaaataaac
     2401 ttcgcttctt cgctctcaaa tgagatcccg ccacgttctt cacgggcttt atccagcact
     2461 ttatagaggt tatgcaactc ttcgagatgc ttaaccagcg gagcgtactg ctcgcgcaga
     2521 tcctgatcgc cctgcagaat atgccagact ttggtgtagg tcagacgcgc gtgagagctc
     2581 atcaccgctt cgtagaattt gtagcccgtc aggcggcctt tcgacgaaac cgtcatctcg
     2641 cacaccatac acaggcggtc tacctgcgga ttgagcgagc acagaccgtt agagagcact
     2701 tccggcagca tagggataac ctgcgaaggg aagtacaccg acgtaccacg attacgcgct
     2761 tctctatcca gcggcgttgg cggacgcaca tagtagctga cgtcggcaat cgcgacccat
     2821 aaacgccagc cgccgccgcg ttttttctcg cagtaaaccg catcgtcaaa gtcacgggcg
     2881 tcttcgccat caatggtgac cagcggtaaa tcgcgcaaat cgacacggcc cgcttttgct
     2941 tcttccggca cttcttcttt cagcccggca acctgttgct caacagcctg cggccagatg
     3001 tacggaattt catgggtacg caaagcgata tcaaccgcca tgccggtgcc catattgtcg
     3061 cccagcactt cgacgatttt acccaccgct ttggtacggc gagtcgggcg ttgggtcagt
     3121 tcaacaacca ccacaaagcc catccgcgcg cccatgatct gatcgggcgg gattaagata
     3181 tcgaagctca gacggctatc gtcaggaacc acaaagccga cgcccgcttc ggtaaagtag
     3241 cgaccaacaa tctggctggt ttttggcacc agtacgcgga caatacgcgc ttcacgacga
     3301 cctttacggt cagcacccag cggctgagcc agcacctgat cgccatgaat gcaggttttc
     3361 atctgctcgc tggagagata caaatcatct ttacgccctt caacccgcag aaagccgtag
     3421 ccatcacggt ggccaataac ggtacctttc accaggtcga ggcgttccgg cagcgcatag
     3481 cactgacgac gagtgaagac cagttgacca tcgcgctcca tcgcgcgcag gcggcgacgc
     3541 aggccttcaa gctgctcttc gccttcaatg tgcagttcta ccgccagctc atcacggctg
     3601 gccggttttt cacgtttggt taaatgttcg aggataaatt cccgactagg gatgggattc
     3661 gcgtattttt cagcttcgcg ttcctggaaa ggatcttgtg acatctcggt tcctccgttg
     3721 tcatctctga tgaagatttt cgtcactcca ccagcaataa tttataaagc ggttgattct
     3781 cttcaaccaa atcggcaagc gtgtagttat ccagttccgt aagaaaactt tgcacggcct
     3841 tagaaagcgc ctgtttcaac cgacaggcag gtgtaatgtg gcaaaactca ctgctgcaat
     3901 tcaccagcga taagggctcc agctcgcgca ccacatcacc aatacgtatc gcactcgccg
     3961 gtttacccag gcgaatgccg ccattttttc cacgaacagc agtcacgtag ccggcacgac
     4021 taagttgatt gattattttg accatatgat tacgggagac gccgtagacg tcagtcactt
     4081 cagaaatact ggtcatccgc ccttctggca atgacgccat gtagatcagc gcacgtaatc
     4141 cgtaatcagt gaaactcgtt aactgcacat caacctcaaa agggaaatcg ggaaaaaata
     4201 catttatatt gatgataaac cagccacaag ctgtgtcgct aatttatttc agttcgggga
     4261 aggaaaaaag cgaggattta acactgtgtc ggatagcgta atggcttaac cgacacagca
     4321 atgtatcaca ctgttagccc ggcaggcaaa atatctgcca ggcgtaccag aattacgcgt
     4381 cgaacgggtc gcgcagaatc atagtttcag tacgatccgg accggtagag atgatatcga
     4441 tcggcacacc ggtcagctct tcaatacgct tgatgtagtt cagcgccgcc tgcggcagcc
     4501 cgctacgatc tttcacgccg aaagtggatt cagaccagcc cggcatggtt tcgtaaatcg
     4561 gctctacacc tttccagtcg tcagctgcca gcggagtggt agtcacttcg cgaccatccg
     4621 gcatacggta agccacgcag agtttaacct ctttcaggcc atccagaacg tccagtttag
     4681 tcaggcagaa gccagacagg gagttcagct gtaccgcacg acgaacggca acggtgtcca
     4741 gccagccggt acgacgacga cgacccgtcg ttgcgccgaa ttcgttaccc tgcttgcaga
     4801 ggaactcgcc agtttcatca aacagttcgg tcgggaaagg acctgcaccc acacgagtgg
     4861 agtaagcttt gaggataccc agaacgtaat caacataacg cgggcccagg ccggaaccgg
     4921 tcgccacgcc accagcagtg gtgttggaag aagttacgta cggataagta ccgtggtcga
     4981 tatccagcag cgtaccctgc gcaccttcaa acatgacgaa atcgccacgc tgacgcgcct
     5041 ggtcgagcag gtcagaaacg tcaaccacca tagaagtcag gatgtcggca acagccatcg
     5101 tatcatccag aactttctgg taatcaaccg cttcagcttt gtagtagtta accaactgga
     5161 agttgtgata ttccatcact tctttcagtt tttcagcgaa ggtttctttg tcgaaaaggt
     5221 cgccaacacg cagaccgcga cgtgccactt tatcttcata agcaggcccg ataccacgac
     5281 cggtggtgcc gatcgctttc gcgccacgcg ctttctcacg cgcgttatcc agcgcaacgt
     5341 gataatcaag gatcagcgga catgcttcag acagcagcag acgctcacga acggggatgc
     5401 cacggtcttc cagttctttc atctctttca tcagcgcggc cggagacagc acaacaccgt
     5461 taccgatgat gctggttaca ttctcgcgga gaatacctga tggaataaga tggagaacgg
     5521 ttttttcacc gttgattacg agagtatggc ctgcgttgtg accgccctgg tagcgtacaa
     5581 catatttagc ccgttcagtc agaagatcga cgatcttacc tttaccttcg tcaccccatt
     5641 gggtgcccag tacgacgacg ttgttaccca tttttcaaaa tcaccgtttg cttaaaaatg
     5701 gattctacca tcgctttttc agagttacag cactttttgc actcaaaaat gacctcgatc
     5761 agtctgtttt ttgttcagcc aatcgttttc ctcaacatgt agtagaccac aacgcccgca
     5821 accacaagtc caccgccaaa acgacgtaaa atattatcgg gcaaattggt catcgcagag
     5881 atcatcttct tccatgcctt cgggtaaagc atcggcccta aaccttccag taccaaaacc
     5941 agggcaagcg ccagccagat tgtcgaattc attcattatc cttatagaaa aagaaaacca
     6001 ccgacatccc tgaggatgcg gtggctttat tgacctgtac cgcagtcgtt atattaacgc
     6061 gttgcggaag tcggcgtctt catgtagcgg aagaaatcgc tatccgggct catgaccatc
     6121 acgtcctgat tgccagagaa gctgttctca taagcacgca ggctacggat gaatgcgtag
     6181 aagtccggat ctttactgaa tgcatcagca aacagtttgg ctgcttcggc atcgccttca
     6241 ccacgcatga tgcggccctg acgctcagct tctgccagcg ttctggtcac ttcatagtcg
     6301 gcagtcgcgc gcagtttttc cgcttcttcc tgaccttgtg aacggtgacg acgcgctacc
     6361 gcttcacgct cggcgcgcat acggttgtag atcgcttcag acacttcggt cggcaggttg
     6421 atctgcttga tacgcacatc gacaacttca atacccagcg ccgccatact gttcgggttg
     6481 atgaccggaa ctttgccctt cgtctcagcc gttacgcgct ctgccgcttc ggcaatggcg
     6541 ttatctgctg ccggggtagt aacttcatct tctgtacccg cagaaccgga gttcagcgcg
     6601 tcacgtactt cgagggtcag acgaccacgg gaatcagtga cgatatcttt cacgtccagg
     6661 cgaccaattt cagaacgcag acggtcagag aacttacgtt tcaacagcac ttccgcttgc
     6721 gaaatgtcgc caccacccgt tgccaggtag taacggctga aatcgctgat gcgccatttg
     6781 atgtaagagt cgacgatcag gtctttcttc tctttggtca caaagcggtc ggcctggttg
     6841 tccatggtct gaatacgtgc gtcgagcatt ttcaccgttt caatgaacgg tatcttgaaa
     6901 tgcagacccg gctcataaac cagaggtttg ttgtcatcgt cacgcagtac cttaccaaaa
     6961 cgcagcgtaa taccgcgctc accttctttg acgacaaaga cagacatgta aagcactacc
     7021 agcacgatga tgataatcgc gataactgac ttacgcatcg ttattccccc tgacgctggt
     7081 agtcgttacg ctgcgcgttg gcgcggcgtt ggtccataat atcgccctga ctggtggacg
     7141 acgtgttgct tgctccactg gttgtggagg aagaggctgg cggcaaacgc agcagattgc
     7201 tggcaccgtt atcgctcttc gccgcagggg cgttaccacc tttcagcatc tggtctaacg
     7261 gcagaaccat caggttgcca cctttatcgt taaccagcac tttgcgggtg ttacccaaca
     7321 ctttttccat cgtctcgata tacagacgct cgcgagtaat ttccggcgcg gctttatatt
     7381 ccggcagaag tttagcaaag cgcgccactt caccctgagc ttccaggatg gtctgggcct
     7441 tgtacgcacg cgcctcttcg aggatacgtt gcgcctgacc gttcgcacgc ggctgaactt
     7501 cgttggtata cgcttctgct tcacgaatgt attgctgttc gttttcacgc gcggcaatcg
     7561 catcgtcaaa cgccgctttt acttcttccg gcggacgagc agcctggaag ttgacgtcca
     7621 gcagagtgat gcccatgtca tacggacgaa tcgtctcttc cagttcgcgc tgggtatcgc
     7681 tacgaatcac ggtacgacct tccgtcagaa tgcggtccat ggtgtattta ccgataaccc
     7741 cgcgcagggc gctgtcggta gcctgacgca ggctgtcatc cgggctggtc acgctataca
     7801 gatatttttc cggataggta acgcggtact gcacgttcat ctcaacgcgc actacgttct
     7861 cgtccgacgt cagcatcaca ccggaagcgg ccagttcacg cacggcttcc acgtttaccg
     7921 gtttgacttc gtcgataaac gtcggtttcc agttcagacc cggctcaacc agatggctga
     7981 atttaccaaa gcgtgttacc acgccgcgtt cggcttcttt aatggtatag aaaccactgg
     8041 ccgcccagat aatgacaatc gctgccgctg cgatggtaac gacacgaccg ccaagctgcg
     8101 ggcgcgggcc ttgcgatgaa ctgccaccgc cagatccggt gcctttaccg ccgcccagac
     8161 caccgagctt tttgctcagt ttgcggaaga tatcatctaa atcaggtggc ccttgatcgc
     8221 gaccgccttt gtttccattt ccctcagagt tgccgccagg tttgctgctt ccccacgggt
     8281 cgcggtcttg tccgttatta ccgggctgat tccacgccat gtttgtgctc catatttgtt
     8341 atgcggtgat ccctgttgtc tttcgacgcc agaggatatg actccacgct tcagacgcta
     8401 cgccgttaga tcaggtaatc gatcaacgcc ggttcttgtt tacagaggcg acgccagtca
     8461 acgatcggca tacgaacttg cagacttacg ctgccgtcct cctccatcca ctctttttct
     8521 attgcctgaa gctgataaaa acgacttctc agacgccctt cctgcggtgg cagacgcaat
     8581 gtatgctgcg ccacctcgcc ggaaagccgc tccgtcaaag cctgaaaaag ctgtggtatc
     8641 cccgctccgg tctgtgcgga aagccagaca cggatcggtt tgttctcttc gtcccgatca
     8701 atacgcggtt cgaaatcttc cagcatatcg atcttgttca tcaccagcag ggttgggatc
     8761 tcgtgagcgt cgatctcttc aagaaccgta ttcaccgctt cgatgttttc ttgtacacgc
     8821 acatccgccg catcaatgac gtgcagcagt aatgtggctt gccgcgtctc ttgtaacgtg
     8881 gctttaaatg ccgccaccag atcgtgcggc agatggcgaa taaaccctac ggtatctgca
     8941 agtatggttt caccgacatc cgcgacgtca atacgccgca acgtcgggtc gagggtggca
     9001 aacaactggt ctgccgcgta gacccgcgct tcggtgatgc gattgaaaag ggtagattta
     9061 ccggcgttgg tatatcccac cagcgaaaca gtaggaacgt cggctttgat acgcgattgc
     9121 cgcccctgct cacgctgctt ttcaactctt tccaggcgcg actgtatctg cacgatgcga
     9181 ttacgcaaca aacgacggtc ggtttcgagc tgggtttcac ccggaccacg caaacctatc
     9241 ccgcctttct gtctttcaag gtgggtccag ccacgcacca ggcgcgtagc cagatggcgc
     9301 agctgcgcca gctcaacctg caacttaccc tcatgggtac gcgcacgttg ggcgaaaata
     9361 tctaaaataa ggccggtgcg gtcgatgaca cgacactcgc acaaacgctc caggttacgc
     9421 tcttgcgccg ggctcagggc atggtcaaaa agaacgaccg aagcacccgt cgctttgaca
     9481 gcttccgcaa tttcaactgc tttaccttca cctacaaaat actttgggtg cggcgcttta
     9541 cggctaccgg taatcacctg caatgcttcg acaccggcgg aagaaaccag agattcaaac
     9601 tcctggaggt cttccatatc tttgtctttc gtaaaataga tgtgtaccag taccgcctgc
     9661 tcaccagcat cataacggtc aaacaagcgt ataaccctct aaatagatca gcggggaacg
     9721 caggatcgct ggctccccgt gtaaaaaaaa cagcccgaaa ccttattcgg tttcttcgct
     9781 gtcctgttgc gcggaagtat tctgcgcgct gctaccatga tggtagttac tgctggtacc
     9841 gccaccggcg ttgttactgt gatgagaaac cggacgagac gggacaacag tagaaatcgc
     9901 gtgcttgtaa accatctggc tgaccgtgtt tttcaacagg atcacgaact gatcaaaaga
     9961 ctcgatttgc ccttgcagct taataccatt caccaaataa atagaaactg gaacacgttc
    10021 ccgacgcagt gcgttcagga acggatcttg taaagattgc cccttagcca ttctctcttt
    10081 tccttatatg cttatttgta ctttgaacct ttcgattctg aaaaaattgc gcacgatacg
    10141 tctcaattgt acacattcag cctgtgatag caccaacaac ctgtaatact tcgtcacgcg
    10201 cctgttctgg tttttcactg tcaagccagt gaaccccttc ccaaccacgc agccaggtta
    10261 tctgccgctt cgccaactgt ctcgtggcgc aaacacctcg ataaaccatt tcatcgtatg
    10321 agatttcgcc ttcaaggtaa gaccacatct ggcgataacc cacgcaacga atggaaggca
    10381 agtccgtatg caaatctcct cgggcaaaaa gcgcccggac ttctgcttca aaacctgaag
    10441 ccaacatctg atgaaaacgc tgctcaatgc gttgatggag cagttcacgg ctcgccgggg
    10501 cgatggcgaa ctgatgcacc tgatacggta gagcgtctcc tgacgtttgc gtcagttccg
    10561 ttaaagtttt acccgaaatg aaaaaaactt ccagtgcccg ggaaagcctt tgtggatcat
    10621 ttggatgaat ccttgctgcc gcaaccggat ctacctcctg aagttgacga tgcaatgact
    10681 cccaaccttg ctctgccgcc tgttgctcaa ttctggcccg cacttccggg tctgccgacg
    10741 gtagcggcga caacccttcc agcaatgcct tgaaatacaa catcgtaccg cccactaaca
    10801 gtgggatccg ccccgccgcg gtgatatcgg ccatttccgc cagcgcatcg cggcgaaaat
    10861 cagcagccga gtaagcctgc gacggatcgc gaatatccag caatcggtgc ggcgcggcga
    10921 gtaactcttc agcgttcggc ttcgccgtcc cgatatccat ccctttgtaa ataagggcag
    10981 aatcaacgct tatcaactct actggtaaaa ttttacgcag ctcaatggct aacgccgttt
    11041 taccggaggc cgtcggcccc atcaaaaaaa tcgccttagg caggctcgcc ttactgatat
    11101 cactcatctt tcagggcttt tatcgccgga tgtaaatcaa cagattgtaa cagaccaccc
    11161 ggcggcgttt tcacaagttg cggacataac cgttccacgt ccgccagcag ggttatggcc
    11221 tgtgccattg accactgcgc atgttcgctc atcagatttc gtgcaatcca ctgcgcaata
    11281 ttgccaggtt cgaatacgga ctgcttcgcc aggtagccta tcagttcagg aatcaagatt
    11341 tgtaaatttt gttggcgtaa gggtaaaggc acggccctga tggtcacatg ctgtgcatct
    11401 gactggaaat caatacccaa ttccgccagg gcagactgcg ctttttctaa tgccgatttt
    11461 tcttcgccag aaacttttag ccgcaacgga ataagcagcg gctgagcgca aactggcgct
    11521 tcacccgggg tcagttgtac ctgacgcagc caacgttctg ccactggcaa ggctaaaagt
    11581 gaaatgttgc cgtcgcgctc cagcaacgca cagtcggaat ggacgatagt cagtacccga
    11641 ccaaaactct gactgttcgc cgcaagtgca ggttcctgcg gttccggcgc ttttaatttt
    11701 tgcatcggcg cgggcgtttg caaaagctgg cgatacactt caccttgctg tttctggtag
    11761 cctggctgcg cattcggcca aggggcagcc ggacgactgc ctgatgctgg cgcaggagtg
    11821 tagcgcggag ctaccggctc acgagctgcc ggttctgcaa agtgattgcg ccccgccgcc
    11881 acgcggtttt ccggaatgga acgcggtgca ggttggggtt catcgtccag cggtagcggc
    11941 gtttccagtt gctgttgtag cacgctcagc acgccctgat agataaaatc atgcaccaga
    12001 cgcgactgat ggaaacgcac ttcgtgtttg gcggggtgca cgttgacgtc cacctgatgc
    12061 ggatcgatct ccagatacag cacaaatgcc ggttgctgat cggcccccag tttgtcttcg
    12121 caggcctggc ggatcgcgtg attgatcagg cgatcgcgca tcatgcgacc gttcacgtag
    12181 caatactgaa tttctgccag tgcgggcgtg gtgtgatttg gatcggccac ccagccgcgt
    12241 agcgtgagat cgccgtgttg ccattcaatc gccagcgctt gttcaagaaa agcggtgccg
    12301 caaatcgcgc ctaagcgccg ttctttttgc ccgccttccg gcactgcgcg gtactgacgc
    12361 acaattttac cgttatgcga caggttgatc gtgacgtcga aacgcgccag cgcaatgcgg
    12421 cggatgatct catcaatgtg gttaaattcg gttttctcgg tgcgcaggaa tttgcgccgc
    12481 gccggggtgt tgtagaacag atccagcacc tccagcgtcg tccccacagg atgcgccgcc
    12541 ggttttaccg tcacgttcat atcgcgccct tcggcatagg cctgccaggc ttcctgctgt
    12601 tctgcggtgc gtgaagtgag cgtcaggcgg gaaaccgaac tgatactcgc cagcgcctca
    12661 ccgcgaaagc ccaggctgat aatggcttcg agatcgtcca gagaggcgat tttactggtg
    12721 gcatgacgag ccagcgccag cgccagctca tcttttttga taccgcagcc gttatcacga
    12781 atgcggataa gtttcgcccc accgcgttcg atatcaatat cgatacgcgt cgcacctgca
    12841 tcgaggctgt tttccaccag ttctttgact accgacgcag gtcgctcgac cacctcacct
    12901 gcggcaatct ggttcgccag ttgtggcggt aagacctgaa ttggcatcaa tcgtccttag
    12961 tttggcagcg tgcgatctgg cgtcgtcacc gtactggccg tttgtgccgt tgcaccctgc
    13021 ggcgcagatt gcatcggatg cgcaaggaaa taattgcgca ggcctttgta aatggcttct
    13081 gccagctgtt gttggtaatc gtcgctcgcc agcaaacgtt cttcgctgtt gttgctgata
    13141 aaaccggttt cgaccagtac tgacgggata tccggcgaac gcagaacgcc gagactcgcg
    13201 tgttctggtc ggcgtttatg tatttcgcca atgcgttgca actgactgat catactggtc
    13261 gctacatcat accctacccg ctgggaatga ccgaactgta aatccagcac cgcctggctt
    13321 aaatagggat cagactgact gttcgccagc acatcgcccg ccccacccag cagctccgaa
    13381 tgtttctcgt gctgctccag ccagctggcc atttcgctgt tggcgcgacg gttagagagc
    13441 acccatacgg aagcgccagt cgcactgcgg ttcggtgcgg catcagcgtg aatcgacacg
    13501 aggaaattag cgttttgctt acgtgccaca tcgctgcgcc ccatcaccga aataaagtaa
    13561 tccccgtcac gggttaaaac gcctttaaac atcggatcgt cattgagcaa agtacgcaat
    13621 ttacgcgcga tggcgatggt gacatttttc tcccgcgtac caccggggcc gatagcgcca
    13681 gggtcctgac cgccgtgtcc ggcatcaata gcgatgataa ttttatcgcc agtgttagcc
    13741 gtcgcgcgcg ctgccggacg cgttaccgta ttactgctga taacacccgt agtgcggtta
    13801 ctttccgttt taaacggatt gcgcgccggt tcgctgacgc gcggtgcgac aaccgcaggc
    13861 gtttcaacgc gtttcgcaac cacgggcggc ggaggaggcg gtggcggcac atcggcgtta
    13921 atcgtaaaga cgacagtgta attgctgcca ttctgccgct tcaccgcttc ggttttacca
    13981 ttttcggtaa gatcgaccac cagccgtagc gtttgtgcat ctttaggcgt tccagagcga
    14041 atcgccttca ccagattatt gccgctgaac aacaacggca gtccctgaat cacgcccgtt
    14101 tgtttgatat cgagcgccac ggtgcgtttg ctttgatggc taaacgcata atcaggatcg
    14161 ccaataaaac tcaacgttat ccgcgcctgt tgattaccgt tagaaacctg aatatcagag
    14221 agcgtcgcgg cacccaccgg cgtgcacagc agcagcagcg tcgctaccaa ccaatttctg
    14281 atgcgataca tcatcccgcc acctttcaaa ggttaaccgg ctaaacgcgc cagcaacaat
    14341 tcacccgcag aggaaaccgc actcacgcgc gcctcacggc cttgtgcctg ataatcaatg
    14401 tgtatttcga catccgggtc aggaagaaca cctgtacctt gttgtggcca ctccaccagg
    14461 cagatggcat cgttggcaaa ataatcgcgg atccccataa actccagctc ctcgggatcg
    14521 gcaaggcggt acaaatcaaa gtgataaacc attaaattgt cgagcgtata gggttcgacc
    14581 agcgtataag tggggctttt gacattaccc tgatgaccca gagcttgtaa aaagccccgg
    14641 ctaaaggtgg tcttacctgc gcctaaatcg ccatacagat agattacggt tgcgccatcg
    14701 caggctttcg ctacccgctc gcccaggtct aatgttgcct gctcatcagg gagcggaatt
    14761 actcgattca tcatggtttt tatcagtcac ttccgggtta acaatacgct gtagcgtgga
    14821 aaagagatcg gttgccagca tcccgcgcgt tccaaaacgc gccgccagta cgtcagctgc
    14881 cgcaccgtgc gcgacacagc ccgcacaggc ggcatcatac ggcgacagtt tttgcccaag
    14941 caatgcgcca ataataccag agagcacatc gcccatgccg ccgctcgcca tgcctgcatt
    15001 tccggcatca ataatgccta aagcgtcagg atgggcggcg accacggttc cggcaccttt
    15061 cagcaccgct acgccgccat aacgttgtac cagacgtttg gcgcaatgta agcggtcact
    15121 ttcaatttca gcgacggaac agcctaacaa ccgtgcggcc tcgccaggat gcggcgtgat
    15181 cacgcgattg tgacgcttat cgggattgat tgccagcagg ttcaatgcat cggcatccca
    15241 caacatcggt ttgcgaaaat tctcaacttt ttgcagtgct tttttccccc actcttgctg
    15301 gcccagaccg ggaccaatca ccaccacatc ggcccattcc aggctttcgg taagagagtc
    15361 catcgtcagt tcatgcacca tcaattccgg tcgtgcagtc agcagcggcg caatgttttc
    15421 actgcgggtc agtactcgga ctaaaccagc accagcacgc agcgccgctt cccccgtcat
    15481 acgaatagcc cccgccgtgc cgtgatcgcc accgataatt accagccgcc cgtgatcgcc
    15541 tttatgcgaa gtcgggcgac gcggttttag ccagtgagaa agttgttctg ctgaaaaccg
    15601 ctgaattttc gtctcctgac ctgccagcca actatccagc cccagtgagt caaaatgcag
    15661 ttgtccggta acatcccgcg cttttccagt gagcaagcct ggtttcagcg caataaaagt
    15721 gatggagtga tcggcgttga tcaccgcgcc tggcgtagcg ccagtttcag ccagcaggcc
    15781 ggaagggata tcaaccgcca caatcggcgc aggatgggaa ttagcgtggt cgattaactg
    15841 gctaatggat tcgcggggcg cttgccgcaa accggtaccg agcagcgcat caacaatcag
    15901 atctaccgat tcgggccaga caatattcga agcatggatc tcgccacccg cgtttaacca
    15961 tgcttcgcgt gccagcgcgg cctcttccgg caacggtttg tcgctctcct gggcaaacaa
    16021 cgtgacctca atgccgaccg ctttggccag tcgcgcgacc acgtagccat cgccgccgtt
    16081 attaccatga ccgcacagca ccagccagtg gcgggcgtca ggatacgccg aacgacacac
    16141 ctggaatgcg gcctcgccag cgcgaagcat cagctcatag agtgtgagcc ccagcacatc
    16201 tgccgcctcg cgttctccgc ggcggatatc gtcggcgtac cagacggtgt gtggtatact
    16261 tacggggttt ttcttcattg tatggtccgt catgtcagag cccctcgatc tcaatcagtt
    16321 agcgcaaaaa attaaacagt gggggctgga actgggcttt cagcaggtag gtattaccga
    16381 taccgatctc agcgagtccg agcccaaact gcaagcatgg ctggacaaac aataccacgg
    16441 cgaaatggac tggatggcac gtcacggtat gctgcgcgct cgccctcatg agttattgcc
    16501 cggtacgctg cgcgtgatca gcgtgcggat gaattacctt cctgctaacg ccgcatttgc
    16561 cagcacgctg aaaaacccca aactcggcta tgttagccgt tatgcgctgg gccgtgacta
    16621 tcacaaactt ctgcgcaacc gactcaaaaa gctgggcgag atgattcagc aacattgtgt
    16681 ttcgctgaat tttagaccgt ttgtcgattc tgcgcctatt ctcgagcgcc cgttagctga
    16741 aaaagctggg ctcggctgga caggtaagca ctcacttatc ctcaatcgcg aggccggttc
    16801 gttcttcttt ttaggcgaat tgctggtcga tattccgctg cccgtggatc aaccagtcga
    16861 ggaaggatgc ggtaaatgcg tggcctgtat gacgatttgc ccgaccggtg ccatcgtcga
    16921 gccatatacc gtcgatgctc gccgctgtat ctcttatctc accatcgaac ttgaaggggc
    16981 gatcccggaa gagttgcgac cgttaatggg aaaccgtatt tacggttgcg atgactgcca
    17041 gcctatctgc ccgtggaatc gctattcaca actcaccaca gaagaggatt tcagcccgcg
    17101 taagccgcta cacgcaccgg aactcattga gttattcgcc tggagcgaag agaagttttt
    17161 aaaagtcacg gaaggatcgg cgattcgtcg aattggtcac ctgcgttggc tgcgtaatat
    17221 cgccgtagca ttaggcaatg ccccttggga tgaaacgatt ttgacagcgc tggaaagtcg
    17281 taaaggtggg cacccacttc tcgatgagca catagcgtgg gcgattgcgc agcaaataga
    17341 gagacgaaat gcgtgcatag tcgaagtgca attgccgaaa aaacagcgtc tggttcgggt
    17401 gattgaaaaa gggttaccgc gtgacgcctg attcatccac agcttgtgaa taaaaataaa
    17461 aacgcattgc aattcaagac gaataaaatc gtcaagtgat cgactcgaca aaacggaatc
    17521 ttaattttta acttatctat caataggtta aaaaaatact attcaccgtg cgaagtttct
    17581 ttgaaattaa gattacagcc tgaggctgtg gataactctg tttacaagag tttgtcagag
    17641 acaacgaaaa ccagcaataa cgcatcgctg tggatatttt attgagagaa gaat
//
LOCUS       DADKRT010000084        17494 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.085, whole genome shotgun sequence.
ACCESSION   DADKRT010000084 DADKRT010000000
VERSION     DADKRT010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17494
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.085"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..642)
                     /locus_tag="JQ356_002339"
     CDS             complement(<1..642)
                     /locus_tag="JQ356_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HAY4622409.1"
                     /translation="MSLNFTVIVWLRLSIGGVYELAFCRSSLKSKKYFIILLALAAIA
                     GLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKG
                     TQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAI
                     KDLQSKAPDKNIVIFTHNHCLTYIAKNKRDATFKPDYLDGLVMHVEKGKVYLDG"
     gene            893..2032
                     /gene="arnB"
                     /locus_tag="JQ356_002340"
     CDS             893..2032
                     /gene="arnB"
                     /locus_tag="JQ356_002340"
                     /EC_number="2.6.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024188371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4-deoxy-L-arabinose
                     aminotransferase"
                     /protein_id="HAY4622410.1"
                     /translation="MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQ
                     LTGNQHAIAVSSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDV
                     DRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVG
                     TYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDR
                     QTWGRAPQAEVLTPGYKYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPF
                     QPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYR
                     ERFPTLSLPNTEWNSERICSLPLFPDMTTADADRVITALQQLAGQ"
     gene            2036..3004
                     /gene="arnC"
                     /locus_tag="JQ356_002341"
     CDS             2036..3004
                     /gene="arnC"
                     /locus_tag="JQ356_002341"
                     /EC_number="2.4.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate
                     4-deoxy-4-formamido-L-arabinose transferase"
                     /protein_id="HAY4622411.1"
                     /translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL
                     LIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDAD
                     LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYG
                     CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLI
                     NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV
                     LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE"
     gene            3004..4986
                     /gene="arnA"
                     /locus_tag="JQ356_002342"
     CDS             3004..4986
                     /gene="arnA"
                     /locus_tag="JQ356_002342"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HAY4622412.1"
                     /translation="MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGS
                     VAHLAAERGIPVYAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFN
                     LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAIT
                     LHHKLCHATRQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLH
                     NMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISIAPLLIACGDGALEI
                     VTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTER
                     LLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI
                     ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSN
                     LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGS
                     SRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG
                     NPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR
                     NAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS"
     gene            4983..5873
                     /locus_tag="JQ356_002343"
     CDS             4983..5873
                     /locus_tag="JQ356_002343"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HAY4622413.1"
                     /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
                     MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE
                     VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIE
                     AKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKTEDFNGWLL
                     NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
                     RGNIAGREGWLGCQQIAGSR"
     gene            5873..7525
                     /gene="arnT"
                     /locus_tag="JQ356_002344"
     CDS             5873..7525
                     /gene="arnT"
                     /locus_tag="JQ356_002344"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HAY4622414.1"
                     /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
                     SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
                     LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG
                     KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT
                     VLPWGLAIAQREPDFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
                     GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLA
                     AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW
                     AFFGWYTLTNVEKTWSFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
                     YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
                     QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK"
     gene            7522..7857
                     /gene="arnE"
                     /locus_tag="JQ356_002345"
     CDS             7522..7857
                     /gene="arnE"
                     /locus_tag="JQ356_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HAY4622415.1"
                     /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL
                     ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG
                     GIVILGSTV"
     gene            7857..8243
                     /gene="arnF"
                     /locus_tag="JQ356_002346"
     CDS             7857..8243
                     /gene="arnF"
                     /locus_tag="JQ356_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311173.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnF"
                     /protein_id="HAY4622416.1"
                     /translation="MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG
                     LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS
                     LKALLGVACIMSGLMLIFLPTTKQRY"
     gene            complement(8237..8503)
                     /gene="pmrD"
                     /locus_tag="JQ356_002347"
     CDS             complement(8237..8503)
                     /gene="pmrD"
                     /locus_tag="JQ356_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416762.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein PmrD"
                     /protein_id="HAY4622417.1"
                     /translation="MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGD
                     LLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCTAAGKTQ"
     gene            complement(8613..9968)
                     /gene="menE"
                     /locus_tag="JQ356_002348"
     CDS             complement(8613..9968)
                     /gene="menE"
                     /locus_tag="JQ356_002348"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HAY4622418.1"
                     /translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELATGF
                     AAQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQY
                     ALVLEGENTFPALTSLHIQMVEGTHSALWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
                     ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
                     THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS
                     TVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
                     RDRGEMHNGKLTIVGRLDNLLFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH
                     RPVAVVEYDQQTVDLGEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
                     Q"
     gene            complement(9965..10927)
                     /gene="menC"
                     /locus_tag="JQ356_002349"
     CDS             complement(9965..10927)
                     /gene="menC"
                     /locus_tag="JQ356_002349"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HAY4622419.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
                     ISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELLQMPSVAFGVSCALAELADTLPQAA
                     NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALRLTAVISSSIESSLGLTQLAR
                     IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL"
     gene            complement(10927..11784)
                     /gene="menB"
                     /locus_tag="JQ356_002350"
     CDS             complement(10927..11784)
                     /gene="menB"
                     /locus_tag="JQ356_002350"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HAY4622420.1"
                     /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNVGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(11799..12557)
                     /gene="menH"
                     /locus_tag="JQ356_002351"
     CDS             complement(11799..12557)
                     /gene="menH"
                     /locus_tag="JQ356_002351"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HAY4622421.1"
                     /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
                     VDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAG
                     LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQRFRTEPLTAVFADWYQQPVFASLNDDQ
                     RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
                     ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
     gene            complement(12554..14224)
                     /gene="menD"
                     /locus_tag="JQ356_002352"
     CDS             complement(12554..14224)
                     /gene="menD"
                     /locus_tag="JQ356_002352"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HAY4622422.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
                     SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
                     AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPSLESEKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
                     QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
                     ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSL
                     VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
                     ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
                     HRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL"
     gene            complement(14313..15608)
                     /gene="menF"
                     /locus_tag="JQ356_002353"
     CDS             complement(14313..15608)
                     /gene="menF"
                     /locus_tag="JQ356_002353"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HAY4622423.1"
                     /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL
                     ASQQTYPQFYWQQRNGDEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDP
                     SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTT
                     TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLN
                     LNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANHPDDKQAQQLEEWLM
                     ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI
                     CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS
                     GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME"
     gene            complement(15687..15992)
                     /gene="elaB"
                     /locus_tag="JQ356_002354"
     CDS             complement(15687..15992)
                     /gene="elaB"
                     /locus_tag="JQ356_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HAY4622424.1"
                     /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE
                     KALDDVKKRVSQVSDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            complement(16047..16508)
                     /locus_tag="JQ356_002355"
     CDS             complement(16047..16508)
                     /locus_tag="JQ356_002355"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4622425.1"
                     /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
                     TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLDT
                     CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
     gene            16573..17490
                     /gene="rbn"
                     /locus_tag="JQ356_002356"
     CDS             16573..17490
                     /gene="rbn"
                     /locus_tag="JQ356_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HAY4622426.1"
                     /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ
                     HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVE
                     TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALN
                     AQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA
                     ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD
                     DKGCQHLLRECRSIFPATELANDFTVFNV"
BASE COUNT         4113 a         4698 c         4438 g         4245 t
ORIGIN      
        1 cccatccaga taaactttgc ctttttccac atgcatgact aaaccatcca gataatcagg
       61 tttaaatgtc gcatcacgct tatttttagc aatatatgtc aggcaatgat tatgggtgaa
      121 aataacgata tttttatcag gcgctttgct ttgtaagtcc ttaattgcac tataaatctc
      181 attaccgcac tgaagaagtc gtttatctac cgtcagcttt ttacccgcgg aaaaccaggt
      241 cgccgactga atggtccgga cggtattact ggaataaaga tcgaaatcag ggatgtcagc
      301 gctaaaagcg ttgcccagtt cacgggcatc ctgggtacct ttaaccgtaa tacctgtttt
      361 atctgacaag cattgattgg ttgaacgatc gcaacgttca gcatggcgaa acaaaacgac
      421 aaccgggtgc tgctgtgcca gtctggccaa tgttttattg tcgatacgtg gcaaaccatt
      481 gctactccag gcggcatgag tacccagtcc ggcaattgca gcgagcgcca gtaaaatgat
      541 gaaatatttt tttgacttca atgatgagcg gcaaaaagct aactcgtaaa ctccacctat
      601 agacaagcgc aaccagacaa ttaccgtgaa attgagcgac atttctggtg ataattagca
      661 gttggtgtaa tattaaaaat cctacgatgt cggcaaaatg cctcaaaatt ttgccaaatg
      721 caaagcctaa ataagaaaaa atataaaaat ttcaatattt acgtctaata ttagtttctt
      781 aaggttaagt taatattcta tccttaaaat ttcgttccaa atggcaaaat atacacaaca
      841 ctctttatag caaatataag tggacaggta ttcaatggcg gaaggaaaag caatgtcaga
      901 atttttgcct ttttcgcgac cagcaatggg cgtggaggaa ctcgctgcag ttaaagaagt
      961 tctcgaatcc ggttggatca caaccggtcc gaagaatcag gcgcttgagc aagccttttg
     1021 ccagttgacg ggaaatcagc atgccatcgc ggtcagttca gccaccgccg gaatgcatat
     1081 cacgctaatg gcgttggaaa ttggcaaggg cgatgaagtg attacgcctt ccctgacctg
     1141 ggtttcaacc ctcaatatga tttccttgtt gggtgcaacg ccggtaatgg tggatgtcga
     1201 ccgcgatacg ctgatggtca cgcctgaagc gatcgagtca gccattacgc cacgcactaa
     1261 agccatcatt ccggtgcatt atgccggtgc gccagcagat attgacgcca ttcgcgccat
     1321 tggcgaacgt tacggcatcg cagttatcga agatgctgcc catgccgtcg gtacgtatta
     1381 caaagggcga catattggcg caaaaggtac cgctattttt tcatttcatg ccattaaaaa
     1441 tattacctgt gcggaaggtg gcctgattgt aactgataat gaaaaccttg cccgccagct
     1501 acggatgctg aaatttcacg gcctgggtgt cgatgcctac gacagacaaa cctggggccg
     1561 agcaccgcag gctgaagtct taacaccggg ctataagtac aatctgaccg atattaacgc
     1621 cgcaattgcc ctgacacagt tagcaaaatt agagcacctc aacacccgtc ggcgcgaaat
     1681 tgcccagcaa tatcagcaag cactggcagc tctccccttt cagccattaa gccttcccgc
     1741 ctggccgcac gttcacgcct ggcatctgtt tattattcgt gtcgatgaac aacgttgtgg
     1801 tatcagtcgc gatgcgttga tggaagcgtt aaaagaaaga ggcattggta ccgggttaca
     1861 tttccgcgcc gctcacacac aaaaatatta tcgcgagcgt tttcccacgc tgtcgttacc
     1921 gaataccgaa tggaatagcg aacgcatctg ttctttgccg ctgttcccgg atatgactac
     1981 cgccgatgcc gaccgtgtca tcacagccct tcagcagctc gcaggacaat aagccatgtt
     2041 tgaaatccac cctgttaaga aagtctcggt ggttattccc gtttataacg agcaggaaag
     2101 cttaccggaa ttaatcaggc gcaccaccac agcctgtgaa tcgttgggga aagagtatga
     2161 gatcctgctg attgatgacg gcagtagcga taattccgcg catatgctgg tcgaagcctc
     2221 acaagcggag aacagccata ttgtgtctat tttgcttaac cgcaattacg ggcaacattc
     2281 agcgattatg gcgggattca gtcacgttac tggcgactta attattaccc ttgatgccga
     2341 tctccagaat ccgccagaag aaatcccccg cctagtggca aaagccgatg aaggttacga
     2401 cgtggtaggg actgtacgcc agaaccgcca ggacagctgg tttcgtaaaa cagcttcgaa
     2461 gatgattaac cggcttattc agcgcaccac cggcaaagcg atgggtgact acggttgtat
     2521 gctgcgcgcc tatcgccgtc atattgtcga tgcgatgttg cactgccatg aacgtagcac
     2581 ctttatcccg attctggcga atatcttcgc ccgccgtgcc attgaaattc cagtacatca
     2641 tgccgagcgt gagtttggtg aatccaaata cagttttatg cgcctgatta atttgatgta
     2701 cgacctggtg acctgcctta ccacaacgcc gctacgtatg ctgagtctgc tcggcagcat
     2761 tattgcgatt ggaggtttta gcattgcggt gctgctggtg attttacgcc tgaccttcgg
     2821 accacaatgg gcggcagaag gcgtctttat gctatttgcc gtgctgttta cttttattgg
     2881 cgctcagttt atcggcatgg gattactcgg tgaatatatc ggcaggatct acaccgatgt
     2941 ccgcgcccgc ccccgctatt ttgttcagca agttatccgt ccatccagca aggaaaatga
     3001 ataatgaaaa ccgtcgtttt tgcctaccac gatatgggat gcctcggtat tgaagctctg
     3061 ctggctgccg gttacgaaat tagcgccatt tttacccata ccgataatcc cggtgaaaaa
     3121 gccttttatg gttcggtggc tcatctggcg gcggaaagag gcattccggt ttatgcgccg
     3181 gataacgtta atcatccgct gtgggtggaa cgcattgccc aactgtcacc agaggtgatt
     3241 ttctcttttt attatcgcca tcttatttgc gacgagattt tgcagctcgc tcccgcaggt
     3301 gcatttaatc tgcacggttc gctgttacca aaatatcgtg gtcgcgcgcc gctgaactgg
     3361 gtgctggtga acggtgaaac ggaaacgggc gttacattgc accgaatggt aaaacgtgcc
     3421 gatgctgggg ccattgtggc gcaactgcgc gttgccattg cgccagacga tatcgctatt
     3481 acgctgcatc ataaattgtg ccatgccacg cgccagctac tggaacagac attacccgcc
     3541 attaaacacg gtaatattct ggaaatcgcc cagcgcgaaa acgaagccac ctgttttggt
     3601 cgcagaacgc cggatgacag tttccttgaa tggcataaac cggcatccgt actgcacaac
     3661 atggtacgtg ccgttgccga tccgtggccg ggtgccttca gctatgttgg caatcagaaa
     3721 ttcaccgtct ggtcgtcgcg tgttcatcct catgccagca aagcacagcc ggggagcgtg
     3781 atttctattg caccgctgtt gattgcctgt ggcgatggcg cgctggaaat cgtcaccgga
     3841 caggcgggcg acggcattac tatgcagggc tcgcaattag cgcagacgct gggcctggtg
     3901 caaggttcac gcttgaatag ccagcctgcc tgcaccgccc gacgccgtac ccgggtactc
     3961 atcctcgggg tgaatggctt tattggcaac catctgacag aacgcctgct gcgcgaagat
     4021 cattatgaag tttacggtct ggatattggc agcgatgcga taagccgttt tctgaatcat
     4081 ccgcattttc actttgttga aggcgatatc agtattcatt ccgaatggat tgagtatcat
     4141 gtcaaaaaat gtgatgtcgt cttgccgctg gtggcgatag ccacgccgat tgaatatacc
     4201 cgcaacccgc tgcgcgtatt tgaactcgat tttgaagaga atctgcgcat tatccgctac
     4261 tgcgtgaagt accgtaagcg aatcatcttc ccgtcaactt cagaagttta tgggatgtgt
     4321 agcgataaat acttcgatga ggaccattct aatttaatcg tcggcccggt gaataaacca
     4381 cgctggattt attcggtatc aaaacaatta cttgatcggg tgatctgggc ctatggcgaa
     4441 aaagagggtt tacagttcac cctcttccgc ccgtttaact ggatgggacc acgactggat
     4501 aaccttaatg cggcacgaat cggcagctcc cgcgctatta cgcaactcat tctcaatctg
     4561 gtagaaggtt caccgattaa gctgattgat ggcggaaaac aaaaacgctg ctttactgat
     4621 attcgcgatg gtatcgaggc gttataccgc attatcgaaa atgcgggaaa tcgctgcgac
     4681 ggtgaaatta tcaacattgg caatcctgag aacgaagcga gcattgagga actgggcgag
     4741 atgctgctgg cgagcttcga aaaacatccg ctgcgccatc atttcccacc gtttgcgggc
     4801 tttcgcgttg tcgaaagtag cagctactac ggcaaaggat atcaggacgt agagcatcgt
     4861 aaaccgagca tccgcaatgc ccaccgctgc ctggactggg agccgaaaat tgatatgcag
     4921 gaaaccatcg acgaaacgct ggatttcttc ctgcgcaccg ttgatcttac ggataaacca
     4981 tcatgaccaa agtaggctta cgcattgatg tcgatacctt tcgtggcacc cgtgaaggcg
     5041 tgccgcgtct gctggaaatc ttgagtaagc ataatattca ggccagcatt tttttcagcg
     5101 tcggcccgga caatatgggc cgccatctct ggcgactggt gaagccacag tttttgtgga
     5161 agatgctgcg ctcaaacgcg gcatcgcttt atggctggga tattttactg gcaggtacgg
     5221 cctggccagg taaagagatt ggtcatgcca atgccgatat cattcgtgaa gcggctaaac
     5281 atcacgaagt cggcctgcac gcctgggatc accatgcctg gcaagcccgt agcggtaact
     5341 gggatcggca aacaatgatc gacgatattg cacgcggtct tcgcactctg gaagagatta
     5401 tcggtcaacc ggtaacctgt tctgccgctg cgggctggcg tgccgaccag aaggtgatcg
     5461 aagcaaaaga agcgttccat ttgcgctaca acagcgattg tcgtggggcc atgccgttcc
     5521 gtccattgct cgaatcagga aaccctggca ctgcgcaaat tccggtgacc ttacccacct
     5581 gggatgaagt gattggtcgg gatgtgaaaa cagaagattt taacggttgg ttactcaacc
     5641 gcatcctgcg agataaaggc acgccggttt ataccattca tgcagaagtt gaaggctgcg
     5701 cttatcagca taattttgtg gatctcctca aacgcgcagc tcaggaaggc gtgacatttt
     5761 gccctttaag cgaactgtta tcagagacgt tgccgctcgg acaagttgtt cgcggaaata
     5821 ttgccggacg tgaaggctgg ctgggttgcc aacaaattgc gggtagtcgc tgatgaaatc
     5881 ggtacgttac cttatcggcc tcttcgcgtt tattgcctgc tattacctgt taccgatcag
     5941 cacgcgtctg ctctggcaac ccgatgaaac gcgttatgcg gaaatcagtc gagaaatgct
     6001 ggcatccggc gactggattg tgccccatct gttagggcta cgttatttcg aaaaacccat
     6061 tgccggatac tggattaaca gcattgggca atggctattt ggcgcgaata actttggtgt
     6121 gcgggcaggc gttatctttg cgaccctgtt aactgccgcg ctggtgacct ggtttactct
     6181 gcgcttatgg cgcgataaac gtctggctct actcgccaca gtaatttatc tctcattgtt
     6241 tattgtctat gccatcggca cttatgccgt gctcgatccg tttattgcat tctggctggt
     6301 ggcgggaatg tgcagcttct ggctggcaat gcaggcacag acgtggaaag gcaaaagcgc
     6361 aggattttta ctgctgggaa tcacctgcgg catgggggtg atgaccaaag gttttctcgc
     6421 ccttgccgtg ccggtattaa gcgtgctgcc atgggtagcg acgcaaaaac gctggaaaga
     6481 tctctttatt tacggctggc tggcggttat cagttgcgta ctgacggttc tcccttgggg
     6541 actggcgata gcgcagcggg agcctgactt ctggcactat tttttctggg ttgagcatat
     6601 tcaacgcttt gcactggatg atgcccaaca tagagctccg ttctggtact acgtgccggt
     6661 catcattgcc ggtagcctgc cgtggctggg attactcccc ggtgcactgt acacaggctg
     6721 gaaaaaccgc aagcattccg caaccgtcta tttgttgagc tggacgataa tgccgctgct
     6781 gtttttctcc gtcgctaaag gtaaattgcc cacctatatt ctttcctgct ttgcatctct
     6841 ggcaatgctg atggcgcatt acgctttgct ggcagcaaaa aataatcctc tggcgctgcg
     6901 gattaatggc tggattaaca tcgcttttgg cgtcactggc attattgcca catttgtggt
     6961 ctccccgtgg ggaccaatga acacgccggt gtggcaaacc ttcgagagct ataaagtctt
     7021 ttgtgcctgg tcgatttttt cgctatgggc atttttcggc tggtacacct taacaaacgt
     7081 cgaaaagacc tggtctttcg ccgcgctttg cccgctgggg ctggcgttgc tggtaggatt
     7141 ttcaattcct gacagagtca tggaaggaaa acatccgcaa ttttttgtcg agatgacaca
     7201 agaatcactt caaccaagcc gctatattct tactgatagc gtcggtgttg ccgcaggtct
     7261 ggcatggagc ctgcaacgcg atgacatcat catgtatcgc cagacaggtg agttgaaata
     7321 cggccttaat tatccggatg cgaaagggag atttgtcagc ggtgatgagt tcgcaaactg
     7381 gcttaatcaa catcgtcagg aggggattat tacactcgtg ctttcggttg accgcgatga
     7441 agatatcaac agtctcgcca ttccgcccgc agatgccatc gatcgtcagg agcgtctggt
     7501 gctgattcag tatcgtccca aatgatctgg ctaacattag tctttgccag cttgcttagc
     7561 gttgccgggc agttgtgtca gaaacaggca acctgctttg tggcgataaa caaacggcgc
     7621 aaacatatcg tgctgtggct gggactggcg ctggcttgtc ttggtcttgc catggtgctc
     7681 tggctgctgg tcttgcagaa cgtaccggta ggcattgcct acccgatgtt aagtctgaat
     7741 tttgtctggg tgacgctggc tgcagtaaaa ctgtggcacg aaccggtatc gccgcgtcac
     7801 tggtgtgggg tggcgttcat tattggtggc attgtgatcc tcgggagtac ggtgtaatgg
     7861 gcctgatatg gggattattc agcgtcatta ttgcctcagt tgcgcaatta agcctgggtt
     7921 ttgcggcaag tcatctgccg ccgatgacgc acttatggga ttttatcgcg gctctgttag
     7981 cttttggcct ggatgcccgg atactgttac tcgggctgct gggttatctg ctttccgttt
     8041 tttgttggta taaaacgcta cataaacttg cgctaagcaa agcctatgcc ttgctcagta
     8101 tgagttatgt gctggtatgg attgcttcaa tggtacttcc cggctgggaa gggacttttt
     8161 cgctgaaagc actactggga gtagcctgta ttatgagcgg gttgatgctg attttcctgc
     8221 ccacgacaaa acaacgttac tgagttttcc ctgccgctgt acactgccgt tcccactcat
     8281 cggggctata actgcttgcc gagaggactt tcaccgtatg cagcttttca cgattaatac
     8341 aataaagcgc attctgcaaa ggcgagagta aatcccccac tttcacggcg aagtcactct
     8401 tcacttcggc gatcattttt atcgcgccgc cagcatcgca gagcataagt acatgtctgt
     8461 tatcttgttt attgcagcac gattttttga ccagccattc cattgcatta tcctgtttgc
     8521 taagagtttt cacatcaatt tacagattaa cagataaact ctttatcaac ggcaatggaa
     8581 tggcagaaat gagaagtgaa acggagggtt aattattgct gacgttgcac ccactctttt
     8641 agcgcctgac gtgaaatttt aataccgccg tttttcagct ccggcggtaa agtcagccag
     8701 cgcaccggtt gttgaaaacg agccagctta tctttcaccc attcgccaag atcaacggtt
     8761 tgctggtcat actccaccac cgctaccggc cgatgaccaa actccttgtc ggcaacggga
     8821 acgataaaca cctgcaaaac cgcaggatgt gcagcaataa cacgctcgac ttcttccggc
     8881 tgaataccct caccgccact gaataacaga ttgtctaaac gtccgacaat ggtcagcttg
     8941 ccattatgca tctcaccgcg atcgcgcgta gcgtaccagc cttcgtcatt aaccagtgaa
     9001 accagttgcc cgttacgcca gtaaccttct gccatactgg cagcccgcag ccacacttca
     9061 ttattaacga ttttcacttc ccgacccggc agcggcgaac caacgtctgc caggccgtcg
     9121 gcttctttcg cacataccgt ggaggcaaac tcggtcagac catagccgca aaagcaacga
     9181 atcccctgct cgcgcgcctg ttccgtcaac tcgaccggga tagccgcgcc gccaagtaac
     9241 accgctttca gggaaacgga actgcggtta accagcaaac gccagagttg tgttggcacc
     9301 agtgaagcgt gagtacagcc tgccagcatt tgctccaatg gctgtttatc acgcaccgtc
     9361 atccgcgcac cagcgtataa ccagcgccac ataattccct gaccggagac gtgaaacagc
     9421 ggtaaagaga gcaaccagtc atcgtgatcg ccaaacggaa tcagcgataa cacaccttgc
     9481 gcactggcaa gatgggcctg ataagtatgg acagcggctt tcggtaaacc ggtggagccg
     9541 gaggtcaatg tcattgaaca aagacgtgtt ggttgccaca gagctgaatg tgtgccttca
     9601 accatctgaa tatgcagtga agttaacgcc gggaaagtat tttctccttc cagcaccagc
     9661 gcatattgca gtgtaagatt tggcagtaat tcctcaagca acggttgcgg aagctgtgga
     9721 tttacgggca gcacccgcgc cccgcattgc agtaacgcca gccaggcgag cagcgtttgc
     9781 ggcgtattcc acgcccgcaa catcacgccg ctgccctcaa ccacaccctg cgccgcaaag
     9841 cccgtagcta actcatcgac gcgagcacaa agctcgcgcc agttgagttg ctcgtcatta
     9901 agacgtaagg cgatggcttc tccccgcact tgccgccagt gacgccacgg ccagtcagag
     9961 aagatcataa caaccgctcc agtgcatcaa cttccacgac aggcagcgtg ctacccggcc
    10021 agcgacgtac ctgctgcgcc tgcatcagat ccagcgtgtc cagccctgga atggtgtccg
    10081 gcgttaacca ggcggcaatc cgcgccagtt gcgttaagcc taagctcgac tcaatagaag
    10141 aactgatcac cgccgtcagc ctcaacgcgt gcgccgcctg tacctgctcg cgtacttttt
    10201 ccagactgcc cgtgagcgtg ggtttgataa ctaccgcgcg cacgccctct tcagccacaa
    10261 aggcaaaatc cggctcgcgc aggctttcat cccaggcaat ggcaatgccg gtttcacggg
    10321 caaacgctcg cgaatcatcg cgggttttgc acggctcttc gagaaacgcg atgcggtggc
    10381 gataatccgg gttaacatat ttggcaaact gctgaccttt cagcggtgtc caggcgcgat
    10441 ttgcgtcaag acgcaaatgc agatccggaa ttgcctccag caacagatta accaccatgc
    10501 cgtcgcgcac ggcttcgtac aatcccactt tgaccttcgc cactttctcg cctggcatat
    10561 cagcaagttt gaggatcaga tcgtcaggat cgccattaca cagtggtgcc gcacggtaat
    10621 tggccgcctg cgggagcgta tctgccagct ccgccaatgc acagcttacg ccaaaggcaa
    10681 cggaaggcat ctgcagtagc tcgcaatcgc ctgccagcca gttatttacc caggcaagca
    10741 gcacgctttg cgcctcttcc caggtttcct ggctgaagcc cggcagtggg gagatctccc
    10801 cccacccttc gcgctcgccc tcacgcaggc aaacgtacag cccgtcgcgg gtttttaacc
    10861 gcctgtcgcg cagaaccacc cccgcgtcca tggggatctg ccagcggtat acctgcgcgc
    10921 tacgcattac ggattccgtt taaatttgct gaaatcaggc tgacgtttct ggttgaaagc
    10981 gttgcgacct tcctgacctt cttccgtcat gtagaacagc atggtggcgt tgcccgccag
    11041 ctcctgcagc cccgcctgcc cgtcacagtc ggcgttcagt gcagctttca ggcagcgcag
    11101 cgccatcgga ctgttttgca gcatttcgcg gcaccagcga acggtctctt tttccagatc
    11161 cgccagcggt accacggtgt tgacaaggcc catatccagc gcctgtttcg cgtcgtactg
    11221 acggcacagg aaccagattt cccgcgcttt tttctgtccg acgatgcgag ccatgtagga
    11281 agcgccccag ccgccgtcga aggaaccgac tttcgggcca gtctgaccga agatggcatt
    11341 atctgccgcg atagtcaggt cgcacatcat gtgcagaacg tgaccgccgc cgatggagta
    11401 gccagccacc atcgcgacaa ccggtttcgg acaggtacgg atctgacgct ggaagtccag
    11461 cacgttcagg tgatgtacgc cggaatcatc tttatagccg ccgtaatcac cacgcacttt
    11521 ctggtcaccg ccggagcaga acgctttatc acctgcgcca gtcagaatga tcacgccgac
    11581 gttgtcgtca taacgcgcat ctgccagtgc ctggatcatc tcttttaccg tcagaggacg
    11641 gaaggcattg cgcacctgcg gacgattaat ggtgattttt gcgataccat cggtggattt
    11701 ttcataacga atgtcctcga aaccttcgga gcagtcgtgc cattcaaccg gtgcgtaaag
    11761 cattgcttca tcaggataaa tcatattgtg tcctttagtc agaaacgcaa gatctgcgcc
    11821 agacttgcga ttacgccagc gggattttcc cgatgcgcgt tatgtccggc gcgaggaatg
    11881 acatggcagt cggcagccag ttccgccgcc agggcgcgga atttgctgtc acgttcacca
    11941 cataaataat aaaacgcaaa tgtgcgggcg ctaaggttag cacgtaaatc aggctggacg
    12001 gcgagagaag tcgcctccag catggcggca agggttgcgc cattattgtt gctgcgcagc
    12061 gccaccagct cccggcgttg atcgtcattg agcgaggcaa aaacaggctg ttgataccag
    12121 tcggcaaata ccgccgttaa cggttctgtg cgaaaacgct gcgcccattg gcgatcggaa
    12181 cgctgacgtt ccgcacgttg ttcagcattt tgcagccccg gatgcccgcc ttcgacaata
    12241 accccacaaa gccccgccag cccctggcaa gccgccatca tcgccacccg tccgccaagc
    12301 gagtacccca ccagccagaa gtcaaggatg ttgtaactaa ccaaggtttt acgcagtaag
    12361 tcggtgacat catcaaatcc atcgacgcta atcgccgccg aaccaccatg acctgggaga
    12421 tcaacataca accgtgagta gtcggcaaac gcctcgccca cttcttgcca ttcgtggcaa
    12481 tcgccggaaa aaccgtgcaa aaacaccagc cagggtaaac ctggttttcc gtgttttgcc
    12541 tgcgcgtgca ggatcataaa tggcttacct gcgccagaag ttgctggagc gtttgcgcac
    12601 catcggtgtc gttaaccacc atttcaatca ccgtggtggt tggcgtgcgc caggcgtcgg
    12661 caaatgccgt ttcaagttcc tgccagtttt gcggacgatg atatttcagc tcgaacatcg
    12721 cggcggcgtg ctcaaaatgg acgttttgcg gcatcagata gaaacgctca cgctcgcttt
    12781 gcggcgttgg caacagcgag aaaatttgcc cgccgttgtt gttcaccaca attaatacca
    12841 gcggcgcaga aacctgacgc aataacgcca gcgcgttgag atcgtaaagt gcggagagat
    12901 cgcccacaat cgccagcgtc ggtttgccgc ttgcccgctg aacgcctgcg gcggtcgaaa
    12961 gcagtccgtc gataccgctg gcccctcggt tgctgtacac cgggtaacct gccggaagtt
    13021 gcgaaagcgc atcaatcaga cgtaccacca ggctgttacc gacaaacaat tgcccctgtt
    13081 caggcagata gtcgctgatg cgatgcgcca gttgcgcttc gccaaacgca tcgcgacggg
    13141 caataaccgc ctgcattgcc tgttccgcca ggcgcgggat ttcaacgcac cagggctggc
    13201 gtttttctgc cggatgcagc tccagccagt cggcaatatt ggcaattaag cggcgtccac
    13261 gatggtgcgc cggatcaagc cgcccttcga tgtcatccac aatccagtac tcttcgggtt
    13321 cacagcttgc ctgccattgc aggagccgtt tgcccgtcag gctgcttccc agttgcacca
    13381 caatttgcgc ctgctgcagc tcgctggtcg ctttggcatt gcctaaccaa agatcggcac
    13441 acggcagcgg ctgcccggtt tgtgacagca catcgccaat cagcggccag ccaagagttt
    13501 gcgcccacag ggcaactttt ttgccctctt ccgcactcat gcgcccggca accaccacgc
    13561 cgcgcttttg tcgccagaag aaccagtcgc gctgtttttc actttccaga ctaggcgctt
    13621 cacgcagcca cggtttgtcg tcctgccacc agtcacccag acgctgttgc cagctaagcc
    13681 cggtatcgtc catttcgcca tacagcggtt cagcaaacgg gcagttgata tggactcccc
    13741 ccgcatgaag cgtaccgaga gcgtggtcga tggtagaaac cagccaacgt gcggggatat
    13801 cctgggtcgg gcgcggcaat gaaatactgt gcgtggggtg agaggcgaac attcccggct
    13861 ggcgaattgc ctgattcgcg ccgcagtcaa ttagctccgg cgggcgatcg gcggttaaga
    13921 gaatcagttt ttctccggtt aacccggctt caatcagtgc cggatagaga tttgccaccg
    13981 ccgtgccgga ggtcacaatc accgccaccg gctgcttgct gactttcgcc agccccagcg
    14041 ccagatgccc caacccacgc tcatcgaaat gggtgtggtg aatgaatgcg gaattctccg
    14101 ccgccgctaa cgttaacggt gtagaacgcg agcctggggc gatacagatg tgtctgacgc
    14161 cgtgacgcgt taatgcttcc agaatgaccg ccgcccagcg tcggttaaat gcgcttactg
    14221 acatgagttt gtccggtatc aatattgcgg ctaagtataa ggagctacaa aaatagatta
    14281 ttgatatgaa tcggtaatga tgcgactcat tactattcca tttgtaataa agtacgcaac
    14341 cctgccgctt tgttgtcgat ttcctgccac tcttgctcgg ggtcggaacc acggacaatg
    14401 cccgcgccag catataatcg cacgacattg ccgctaattt ttgctgagcg cagggaaacg
    14461 cagaattcgc tttgttgtaa tgagagatag cccgcagaac cggcgtacca ttctcgggtg
    14521 aacggttcgt gacgggcgat aaactgtcgc gccagatcgc gcggtaagcc agcaactgct
    14581 gccgttggct gcaactgatg taaacagatc acatcatccg ctttgttgag tgaagtccag
    14641 atacagcggc gaagatgctg cactttacgc agacgcagta cctgcggcgg taaaacatcc
    14701 agcgtctggg tatcggcctg taatcgttgg cagatatctt ccaccaccag catgttctcg
    14761 cgctggtttt tatcatccgc catcagccac tcttctaact gctgcgcctg cttatcatca
    14821 ggatgatttg ctactgttcc cgccagcgct tcagtacgca gcgctttgtc acgccgccgc
    14881 cataaccgtt ccggtgaaga gccaagaaaa gcattttcgc catcaaaggc catgtaaaaa
    14941 tggtagcaat tcagattcag tcgacgactg gcagccatca tcgccgccgc gttgaccgga
    15001 cttgcgaaat gcaggtcagt tgcccgagcg agcaccactt tgtcgagctc accttcggcg
    15061 atggttttcg ttgccagttc gattaattgc gtccagcccg ttttgtccgg ccagtgttgt
    15121 tctcgcgtgg tggttaaatg taacccaggc aagggcttga tactcaccag tgtggcgata
    15181 aattcttttg cctgaatcgc atcgtgctga agggagcttt cgctgaatag cgtcagccgc
    15241 agcgtggctt taccgccaca gcgtcgccat tccaggcggg gtaaaagtaa attgccctgc
    15301 gacgggtcaa aagcattcag cccccaaatg cgtaagtcgg cgtgttccgg gtgctggcga
    15361 agaaaacgtt gtgcctggtc caacgacgta aaacgggtaa tcgcgcccag gacggcagct
    15421 tcttcatcac cattacgttg ttgccagtag aattgcgggt acgtttgctg actggccagc
    15481 cagctcaagg catcaaaagc gtctttgaga gggaaaggaa tatcgataac ccgaatgccg
    15541 ggtgtcgccg gaatctcttg cgacaaatgg cgcagtagat tttccagcgc cgtagtaagt
    15601 gattgcacgc ggacctctcc ctgttaaaag cctcacatta tacggggtac tacaaaaaaa
    15661 atgcagtacc ccggtgtagg gaggttttaa cggcgtgcca gcaacagtcc tagtaccagc
    15721 ccaacggccg cgcccacacc aattccttgc caaggttttt cgtggacgta gtcatcagca
    15781 cgataaacag cctgcttcgc ccgatagtaa taactgtctg aaacctggct aacccgtttt
    15841 ttcacatcat ccagcgcttt ttctgcacgc gctttcagct caacatattt ctgatcagcg
    15901 ggatcgccag aggagcggag cacctcttcc agtgtctcac taagcagcgt caggtcgtca
    15961 tcgatacgtg tatcaccaaa ctgattagac attctcgttc tccatttgcg taaaacctgt
    16021 cactaactat agacaagggt tgttgattac gcctgaatta cctcgcgtgc catcccaatg
    16081 tgtgggatac catcttcttc atagacctcc gtcacaggga taaaaccgaa actctggtag
    16141 aagttttgca gatgcgcctg cgccccgagg taaacaggct tatcaggcca gtgatgcgtg
    16201 caggtgtcga gggttttact catcagttgc tgccccactt tttcgccacg caacgcttca
    16261 ctgacaatca cccgaccaat aacgaccggc tcaagatcat catcactttt cagaatcctc
    16321 gcatatgcca ccagttcatc atttttccaa ccgagaatat ggcgattatc ccccgtcaaa
    16381 tcatcaccat cgatatcctg ataagggcaa ttctgctcga caacaaacac cgcgcaacgc
    16441 agttgtaata aggcataaag ctgggaaacc gataattcag agtgatgcag atcttgccat
    16501 tcaatcataa tgctctcctt ttagatgtat accttatact agccggaata ttttttgaaa
    16561 cgtgatgaac tcatggaatt aattttttta ggtacttcag ccggtgtgcc aacccgcacg
    16621 cgcaatgtca cggcaatatt gcttaacctg caacatccga cccagagcgg actttggttg
    16681 tttgactgcg gtgaaggcac ccagcatcag ctactgcata ccgcctttaa ccctggaaaa
    16741 ctggacaaga tttttatcag tcaccttcat ggcgatcatc tttttggttt acccggcttg
    16801 ctgtgcagtc gttctatgtc aggcattatc caacccttaa cgatttatgg tccgcaaggt
    16861 atccgtgaat ttgtggaaac cgcgctgcgg attagcggct catggaccga ttatccgctg
    16921 gaaattgtcg aaattggcgc tggcgaaatt ctcgatgatg gcctgcgcaa agtaaccgct
    16981 tatccgctgg aacacccact ggaatgttat ggctatcgta ttgaagaaca tgataaaccg
    17041 ggtgcattaa atgcccaggc attaaaagct gctggcgtgc cgcctggccc actgtttcag
    17101 gaattaaaag cgggcaaaac aatcacgctg gaagatggaa ggcagattaa cggcgcagat
    17161 tacttagctg ctccagtgcc aggtaaagcg ctcgctattt tcggcgatac cggcccctgc
    17221 gatgccgcac ttgacctggc taaaggtgtc gatgtcatgg tgcacgaagc gacgctggat
    17281 ataaccatgg aagccaaagc caatagtcgc ggccatagct ctacacgcca ggctgcgaca
    17341 ctagcccgtg aggctggagt cggtaagcta atcattaccc acgtcagctc gcgctatgat
    17401 gacaaaggtt gtcagcacct gttacgtgaa tgcaggtcaa ttttcccggc gactgaacta
    17461 gcgaatgatt tcaccgtgtt taacgtttaa ctct
//
LOCUS       DADKRT010000085        17489 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.086, whole genome shotgun sequence.
ACCESSION   DADKRT010000085 DADKRT010000000
VERSION     DADKRT010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17489)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17489)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17489
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.086"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(177..1037)
                     /locus_tag="JQ356_002357"
     CDS             complement(177..1037)
                     /locus_tag="JQ356_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HAY4622427.1"
                     /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
                     ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
                     KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
                     REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKEDKAA"
     gene            complement(1395..2474)
                     /gene="fbaA"
                     /locus_tag="JQ356_002358"
     CDS             complement(1395..2474)
                     /gene="fbaA"
                     /locus_tag="JQ356_002358"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HAY4622428.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
                     YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLSFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFQELNAIDVL"
     gene            2701..3708
                     /locus_tag="JQ356_002359"
     CDS             2701..3708
                     /locus_tag="JQ356_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase-like monooxygenase"
                     /protein_id="HAY4622429.1"
                     /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
                     YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
                     G"
     gene            complement(3826..5070)
                     /gene="mtr"
                     /locus_tag="JQ356_002360"
     CDS             complement(3826..5070)
                     /gene="mtr"
                     /locus_tag="JQ356_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HAY4622430.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK
                     VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRLKTALLTFAPPV
                     VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMITLIL
                     VFGVGNALVHILSSFNLLPVYQ"
     gene            complement(5224..7113)
                     /locus_tag="JQ356_002361"
     CDS             complement(5224..7113)
                     /locus_tag="JQ356_002361"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH family ATP-dependent RNA helicase"
                     /protein_id="HAY4622431.1"
                     /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR
                     DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH
                     TGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRR
                     FGGDA"
     gene            complement(7106..7186)
                     /gene="yrbN"
                     /locus_tag="JQ356_002362"
     CDS             complement(7106..7186)
                     /gene="yrbN"
                     /locus_tag="JQ356_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HAY4622432.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(7293..8177)
                     /gene="nlpI"
                     /locus_tag="JQ356_002363"
     CDS             complement(7293..8177)
                     /gene="nlpI"
                     /locus_tag="JQ356_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HAY4622433.1"
                     /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDSDSATALFKLAVANNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(8286..10421)
                     /gene="pnp"
                     /locus_tag="JQ356_002364"
     CDS             complement(8286..10421)
                     /gene="pnp"
                     /locus_tag="JQ356_002364"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312072.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HAY4622434.1"
                     /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQN
                     INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE
                     TIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRSVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSREGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIK
                     DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV
                     YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRIRLSIKEATEQSQPAAAPEAPAAEQGE"
     gene            complement(10669..10938)
                     /gene="rpsO"
                     /locus_tag="JQ356_002365"
     CDS             complement(10669..10938)
                     /gene="rpsO"
                     /locus_tag="JQ356_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HAY4622435.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
     gene            complement(11087..12031)
                     /gene="truB"
                     /locus_tag="JQ356_002366"
     CDS             complement(11087..12031)
                     /gene="truB"
                     /locus_tag="JQ356_002366"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HAY4622436.1"
                     /translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT
                     GALDPLATGMLPICFGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
                     FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITIYELLF
                     IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
                     LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
                     LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA"
     gene            complement(12031..12432)
                     /gene="rbfA"
                     /locus_tag="JQ356_002367"
     CDS             complement(12031..12432)
                     /gene="rbfA"
                     /locus_tag="JQ356_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HAY4622437.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
                     RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
     gene            complement(12596..15292)
                     /gene="infB"
                     /locus_tag="JQ356_002368"
     CDS             complement(12596..15292)
                     /gene="infB"
                     /locus_tag="JQ356_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HAY4622438.1"
                     /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT
                     LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
                     AAEEQAQREAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREA
                     AEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMA
                     EENKWTDNAEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKH
                     AESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMA
                     VKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTG
                     AAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITF
                     LDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKI
                     DKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELK
                     AVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQE
                     VLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKL
                     ENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETD
                     ATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPEL
                     KQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRF
                     KDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA"
     gene            complement(15317..16804)
                     /gene="nusA"
                     /locus_tag="JQ356_002369"
     CDS             complement(15317..16804)
                     /gene="nusA"
                     /locus_tag="JQ356_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HAY4622439.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLELGNNAEA
                     VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
                     EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
                     DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
                     ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL
                     LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGIDRDLAFKLAA
                     RGVCTLEDLAEQGIDDLADIEGVTDEKAGALIMAARNICWFGDEA"
     gene            complement(16832..17284)
                     /gene="rimP"
                     /locus_tag="JQ356_002370"
     CDS             complement(16832..17284)
                     /gene="rimP"
                     /locus_tag="JQ356_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HAY4622440.1"
                     /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV
                     LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
BASE COUNT         4117 a         4826 c         4271 g         4275 t
ORIGIN      
        1 gccccaagat caagaccttg aaagtaataa gaaaacacgt tggatattcc gaattaagta
       61 tctgatgcag agactatatc gcgggattgt tattagcgga aattgataat attaattggc
      121 aatcagaata actaataaga gagaggccag agagtattat ctggcctcag cgttgattac
      181 gcagctttgt cttctttcac ccgcttaaag ttcacatcca tttgcgggta cgggaagctg
      241 ataccggcgg catcaaattc acgtttaata cgctccagca catcccagta cacgttttgc
      301 agatcgccgc tgttgctcca gacgcggacc acgaaattaa tcgacgatgc accaagttcg
      361 ttcaggcgca cagtcatttc gcgatctttc aaaatgcgat cttcagactg gataatattg
      421 gtcaggatct gcttaacctg atcgatatcg gaatcatacg ccacgccaat aataaattcg
      481 ttacggcgaa ctggctcgcg ggagaagtta ataatatttc cggcaataat tttaccgttc
      541 ggaataacga taattttacc gtctgcagta cgcatggtgg tggagaaaat ctgcacactc
      601 agcacagtac cggctacgcc gccgaggtca acatattctc cggcacggaa cggtcggaac
      661 atgacaagta acacgccagc ggccaggtta gaaagtgacc cctgcaaagc cagaccaaca
      721 gctaagcctg cggcaccgag tacagcaatg actgacgctg tttgtacacc cacgcgtccc
      781 agggcagcga ttagcgtaaa ggcgataata ccgtaacgga ctaatgcaga aagaaaatca
      841 gcaacagtgg catcgatttt acgggagatc atcaggcgat tcaccgcgtt ggaaatcatc
      901 cgcgcgataa tcaaaccaac gatgatgatc gcgagtgccg ccacgatgtt tactgcataa
      961 cttagcagca gcgcctggtt agctaccagc cagcttcccg cgccgtttat gctatcgaca
     1021 acattcaaat cttccattca atattccttt tcaactgact caaaatggag aaatacactc
     1081 cgccgcctta tgacgggcag tctgacaagg gtaaacaata aagcataatt ttgccaaata
     1141 ggtcacagat ttctcatctg aatcaccttg cttttggcga aaaaatcccc gcagagcggg
     1201 gctcagacag atatcaatgt gcgctttgtc atgccggatg cggcgtgaac gccttatccg
     1261 gcctacaaaa acctgcaaat tcaatatatt gcaggatacg tgtaggcctg ataagcgtag
     1321 cgcatcaggc aattttgctt ttggcgaaaa aaagacccgc agagcgggcc ttgagataag
     1381 cagaaaggaa tatcttacag aacgtcgatc gcgttcagtt cctggaatgc tttttccaga
     1441 cgagcgatca tcgaagtctg accggcacgc agccatacgc gcggatcgta gtatttcttg
     1501 ttcggctgat cttcgccttt cgggttaccc agctgaccct gcagataagc ttcgttcgct
     1561 ttgtagtagt tcagaacgcc ttcccaggtt gcccattggg tatcggtatc gatgttcatt
     1621 ttcactacgc cgtagcttac ggagtctttg atttcctgag cagtagaacc ggaaccaccg
     1681 tggaatacga agctcaggct gttgtgcggc aggttgtgtt tcttagaaac atattcctga
     1741 gaatcacgca ggatggtcgg agtcagaacc acgttacccg gcttgtaaac accgtgtacg
     1801 ttaccgaagg acgcagcgat ggtgaaacgc gggctgattt tgctcagctc ggtgtatgcg
     1861 taatcaacgt cttccggctg ggtgtacagt gcagaagcgt ccatgtggct gttgtccacg
     1921 ccgtcttctt caccaccggt gcaacccagt tcgatttcca gagtcatgcc gattttggac
     1981 atacgctcca ggtatttaga gcagatttcg atgttctctt gcagagattc ttcagacagg
     2041 tcgatcatgt gagaagagaa cagcggctta ccggtagctg cgaagtgttt ttcacccgcg
     2101 tccagcagac cgtcgatcca cggcagcagt ttcttcgcgc agtggtcagt gtgcaggata
     2161 accggaacac cataatgttc agccatctgg tgaacgtgat gcgcaccaga gatcgcgccc
     2221 aggatagcag caccctgcgg aacgtcagat ttcacgcctt taccagcgat aaaggaagca
     2281 ccaccgttgg agaactgaac gataaccggc gctttaactt tagcagcagt ttccagtacg
     2341 gcgttgatgg agtcagtacc gacgcagttt actgctggca gtgcgaagtt gttttctttt
     2401 gctacctgga aaactttctg tacgtcatca ccagtgatta cgccaggttt tacgaaatca
     2461 aaaatcttag acatgtctct tgtcctgtat cgtcgggcct tatactcatc atacttcaag
     2521 ttgcatgtgc tgcgtctgcg ttcgctcacc ccagtcactt acttatgtaa gctcctgggg
     2581 attcactctc ttgtcgcctt cctgcaactc gaattattta gagcacagct cactttgtta
     2641 acaactttaa ctactcttta atgcagtatt aaagattaat cggtaacaaa gtgagctgtt
     2701 atgactgata aaaccattgc gttttcgtta ctcgatctgg cccccattcc cgaaggttct
     2761 tcagcgcgag aagcattctc ccactctctc gatctcgccc gtctggctga aaagcgcggc
     2821 tatcatcgct actggctggc agaacaccac aatatgactg gcattgccag tgctgccacg
     2881 tcggtattga ttggctatct ggcggcgaat accaccacgc tgcatctggg gtctggcggc
     2941 gtgatgttgc ctaaccactc accgttggtc attgccgaac agttcggcac gctcaataca
     3001 ctctatccgg ggcgaatcga tttggggctg ggtcgtgcgc caggtagtga ccaacggaca
     3061 atgatggcgc tgcgtcgcca tatgagcggc gatattgata atttcccccg cgatgtcgcg
     3121 gagctggtgg actggtttga cgcccgcgat cccaatccgc atgtgcgccc ggtaccaggc
     3181 tatggcgaga aaatccccgt gtggttgtta ggctccagcc tttacagcgc gcaactggcg
     3241 gcgcagcttg gtctgccgtt cgcgtttgcc tcacacttcg cgccggatat gttgttccag
     3301 gcgctgcatc tttatcgcag caacttcaaa ccgtcggcac gactggaaaa accatacgcg
     3361 atggtgtgca tcaatattat cgccgccgac agcaaccgcg atgccgaatt cctgtttacc
     3421 tcaatgcagc aagcctttgt gaagctgcgc cgcggcgaaa ccgggcaact gccgccaccg
     3481 attcaaaata tggatcagtt ctggtcgccg tccgaacagt atggtgtgca gcaggcgctg
     3541 agtatgtcgt tggtaggtga taaagcgaaa gtgcgtcatg gcttgcagtc gatcctgcgc
     3601 gaaaccgacg ccgatgagat tatggtcaac gggcagattt tcgaccacca ggcgcggctg
     3661 cattcgtttg agctggcgat ggatgttaag gaagagttgt tgggatagtg tgtcttaacg
     3721 cgggaagcct tatccgagct ggcaacgctg tcctacgtag acctgataag cgaagcgcat
     3781 caggcattgt gtaggcagca gaaatgtcgg ataaggcacc gctgattact gatacaccgg
     3841 cagtaaatta aagctcgata aaatatgtac caatgcgttg ccgacgccaa acaccagaat
     3901 cagcgtaatc atcggcttgc cgccccagac gcggaatttc gggctgccaa agcgtttacg
     3961 cgatgcgcgg gccagcagtg ccggaacaat tgccgcccag atggtagccg ctaaaccagc
     4021 ataaccaatg gcgtacagga atccattcgg gaacagcaga ccacccacaa caggcggtgc
     4081 aaaggtcaac aatgctgttt tcaagcggcc catagccgag tcatcgaaac caaacagatc
     4141 tgccagatag tcaaacaaac ccagcgttac gccaaggaac gaactcgcta ccgcaaagtt
     4201 tgagaacacg accagcagaa ggtccaggct acggctgttc agcacgccgc ttaatgcctg
     4261 taccagcaca tcaatattac cgcccttctc tgcaataccg ataaactccg gacgcgggat
     4321 gttacccatc gtcgccagca accagatggt atacagcgcc agtgccatca gcgtaccgta
     4381 caccaggcat ttcacgatgg ttttcggatc tttgccgtaa tacttcatca ggcttggcac
     4441 gttaccgtga taaccaaacg acgccaggca gaacggcaat gtcatcagca gatacggcgc
     4501 ataagatgca ttgctttctg caacgttgaa caatgtcgca ggctgcacat gccccaacag
     4561 gctgccaaag gtgaggaaga aggtaatgac tttcgccccc agcacaatcg ccgtcatgcg
     4621 gctgacggcc ttagtactca accacaccac aaacgctacc agcagtgcaa aaccaaaacc
     4681 cgccgcccgt gccgggacgt ttagcgacat ctctgcgaag gtgtgatgca gaattgaacc
     4741 actggcagaa atataggcat aggtcaggat atagagcaca aaggcaatgg aaataccgtt
     4801 gaccacgttc cagcctttgc ccagcaaatc tttggtgatg gtgtcaaaac tcgaaccgat
     4861 tcggtaattc aggttagctt ccagaatcat caagccggaa tgcagcatac agaaccaggt
     4921 aaagatcagc gccgccattg accagaaaaa ccacgccccg gacatgacca ctggcagaga
     4981 aaacatccct gcgccaataa tggtgccgcc gataatcacc acgccgccaa gcagcgacgg
     5041 tgacgtttgg gtggtggtta gtgttgccat gagggcttct ctccagtgaa aaatagtgcg
     5101 actgcgttgt tatgcattgc actgtaccag tacgcgagta caaaagacag aaaaaaagcc
     5161 ccgatggtaa aaatcggggc tgtatatatt attttacaga ttgtgttcgc tgttcagcga
     5221 tgattacgca tcaccaccga aacgacgacg accggtagag tcatcacgac gcggagcgcg
     5281 gccttcacga cgttcgccgc taaaacgacg accatcacca cggccacctt cacggcgttc
     5341 accgctgaag ttacgaccgc cttcacgacg ttcgccaccg aaaccacgac caccgccacg
     5401 acgctcaccg ccagtatgcg gctgtgcatc gcccagtaac tgcatgttca tcggcttgtt
     5461 gagaatgcga gtgcgcgtaa agtgttgcag cacttcaccc ggcatacctt tcggcagttc
     5521 gatggtggag tgagaagcaa acagcttgat gttaccaatg taacggctgc tgatgtcgcc
     5581 ttcgttagca atcgcaccaa cgatatgacg aacttcaaca ccatcatcac ggcccacttc
     5641 aatgcggtac agctgcatat cgccaacatc acgacgttca cgacgcggac gatcttcacg
     5701 gtcaccacgc gggccacggt cgttacgatc gcgcggacca cggtcatcac ggtcacggaa
     5761 ttcacgtttc ggacgcatcg gcgcatctgg cggtacgatc agagtacgtt caccctgtgc
     5821 cattttcagc agtgccgcag ccagagtttc gagatccagc tcttcacctt ctgcagtcgg
     5881 ctgaattttg ctcagcagtg cgcggtattg atccagatcg ctgctttcca gctgctgctg
     5941 tactttagcg gcgaattttt ccagacggcg tttgcccagc agttctgcgt tcggcagttc
     6001 tacttccgga atagtcagct tcatagtacg ttcaatgttg cgcagcagac gacgctcgcg
     6061 gttctcaacg aacagcagcg cgcggccagc acgacccgca cgaccggtac gaccgatacg
     6121 gtgaacgtaa gactcagaat ccatcgggat atcgtagtta actaccaggc tgatacgctc
     6181 aacgtccagg ccacgggctg caacgtcggt cgcaatcagg atgtccagac gaccatcttt
     6241 caggcgttcc agtgtctgtt cacgcagcgc ctggttcatg tcaccgttca gcgcggcgct
     6301 gttgtagccg ttacgctcaa gagcttcagc cacttccaga gtcgcgtttt tggtacgaac
     6361 gaagataatc gccgcatcaa aatcttccgc ttccaggaaa cgtaccagtg cttcgttttt
     6421 gcgcataccc cagacagtcc agtagctctg gctgatgtca ggacgggtag tcacgctgga
     6481 ctgaatgcgc acttcctgcg gctctttcat aaagcggcgg gtaatgcgac gaatcgcttc
     6541 cggcatggtt gcagagaaca gagcggtctg atgaccttcc gggatctgcg ccataatggt
     6601 ttcaacgtct tcgatgaagc ccatgcgcag catttcgtca gcttcatcca gaaccagacc
     6661 gctcagttta gagaggtcca gagtgccacg tttcaggtgg tccagcagac ggcccggagt
     6721 accgacaacg atctgcggcc cctgacgcag ggcgcgtaat tgcacgtcat aacgctggcc
     6781 gccgtacaga gcaaccacat ttacgccgcg catgtgttta gagaaatccg tcattgcttc
     6841 agcaacctgt accgccagtt cgcgggtcgg tgccagcacc agaatctgtg gtgctttcag
     6901 ctcaggatca agattctgca acagaggtaa agagaatgct gcagtttttc cgctccccgt
     6961 ctgggccata cccagaacgt cgcggccatt cagcagatgt ggaatacact ctgcctgaat
     7021 tggagatggt ttttcgtaac ccagatcgtt aagggcttca aggataggag ccttcaggcc
     7081 cagatctgca aaagtggttt cgaattcagc catgtagtac gtgtgcctca aaattaatgg
     7141 cggccagtct acataactca tcatgaaatt gatcagcaat tttcattgaa aagtgtgaac
     7201 cggctcaaag taggtgtatt aacgaacaac aacgccctca ccccttaagg tgatggcaat
     7261 caaaaaagat tacgggctga tgtgtacgtc agctattgct ggtccgattc tgccaggtca
     7321 tcttggtcct ggcccaggag cgataattcc aacaatgcgt atcggtgctc aacaaagtta
     7381 tgaacgttgt tggcaaccgc cagtttgaac agtgccgtgg cgctgtccga atcccccaga
     7441 cttaggtagt acttacctaa atagaagttg gtttcactga gatgctcagc gagcgaggtg
     7501 ttatccgttg cgtccgcctt gagcctttcc attaacgttt gttcgctaat gttgcccagg
     7561 tagaactcga caatgttcca tccccactgt tccttatccg atttttcgaa gtgctgtttc
     7621 aacacttctt tagcctgctt ctcatcgagc ttctgctcgg cgagataaag ccacagacta
     7681 cggaaaggat cattgggatc gtcttgataa aacgccagca gatcatcttg cgctaacttg
     7741 tcacgaccgc cgtaatataa tgcgatcccg cgattcaagt gcgcgtagtt gtaagttgga
     7801 tcaagctcaa gtacagaatc aaacgcttca taggcagcat caaaattgcc tgcctgcgtt
     7861 aaatatatgc ctaagtaatt gaacacttca ggcatatccg gtcggattgc cagcgcttgc
     7921 gaaaaatcgt tacgcgctaa tgccctcaga ccgagactat catacaacac tccgcgctca
     7981 tataaaagct gtgcgcgttc gtcatcggtt aaagcccgac tggcaaggat ttgttccata
     8041 cgtgccagaa tcacttcctg ctgtaaagtc ggttgcaatg gtaccgcgag gacttcactt
     8101 ttacgccagg aagtattact gcatcctgca agcgtaagtg ctgtcgcaac gaaacaccag
     8161 cgcaaaaaag gcttcatttc ccactcccga agaccacggt tgaatgaacg tcctgttccc
     8221 ggttgctaac aaggcgtcct gcccggttaa aagccccccg ccgcagcgga gggcaaatgg
     8281 caaccttact cgccctgttc agcagccgga gcttccggtg ctgcagcagg ttgagactgc
     8341 tcagtcgctt ctttaatgct cagacggata cggccctggc gatcaacttc cagaactttc
     8401 accggtactt cctgacccat ctgcaggtaa tcggtcactt tctcaacgcg tttgtcagcg
     8461 atttgagaga tgtggaccag accttcttta ccgccgccga tggcaacaaa tgcgccaaag
     8521 tcaacgatac gggtcacttt accagtgtag acgcggccca cttcgatttc tgcagtgatc
     8581 tcttcgatac gacgaatagc atgtttcgct ttctcgccgt cggtcgctgc gatcttcaca
     8641 gtaccgtcat cttcgatttc gatggtagtg ccagtttctt cggtcagggc acggataaca
     8701 gagccgcctt taccgataac gtctttgatc ttgtccgggt tgatcttgat ggtatggata
     8761 cgcggtgcga actcagagat atcgccacgc ggcgcgttga tcgcctgttc cattacgccc
     8821 aggatatgca gacgcgcacc tttagcctgg ttcagcgcaa cctgcatgat ctctttggtg
     8881 ataccttcaa ttttgatatc catctgcaat gcagagatac cctcgcggga acccgcaact
     8941 ttgaagtcca tatcgcccag gtgatcttcg tcgcccaaaa tgtcagacag tacaacgtag
     9001 ttgtcgcctt ctttcaccag acccattgcg atacccgcaa cggcagcttt gatcggcaca
     9061 cctgcgtcca tcagcgccag agacgcgccg cacacggaag ccatagaaga ggaaccgttg
     9121 gattcagtaa tttcagacac aacacgtacg gtgtacggga atttgtccat atccggcatg
     9181 actgccagca cgctgcgctt cgccagacga ccgtgaccaa tttcacgacg cttcggagaa
     9241 ccgaccatgc cggtttcgcc tacggagtac ggagggaagt tgtagtggaa caggaaggta
     9301 tcggtacgtt cgcccatcag ttcatcaaga acctgcgcgt cacgagcagt acccagcgtt
     9361 gcggtaacca gcgcctgcgt ttcaccacgg gtgaacagcg cagaaccgtg agtacgcggc
     9421 agcacgccag tacgcacatc cagaccacgg atcatatctt tttcacgacc gtcgatacgc
     9481 ggttcgcctg ccagtacgcg gctacgaaca acgtttttct cgatagcgtg cagaatttca
     9541 cccagttcgt tttcgtccag ggtttcgtct tcagcaagca gcgtcgcgat ggtttcagat
     9601 ttgatgacat caacctgcgc ataacgctct tgtttgtcgg tgatgcggta agcatcgctc
     9661 aggcgagctt cagccagtgc agcaacgcgc gcgttcagcg cttcgtttac cggctccggc
     9721 tgccagtccc aacgtggttt accggcttct ttcaccagtt cattgatgtt ctgaataaca
     9781 acctgctgtt gttcatgacc gaacactact gcgcccagca tctggtcttc gctcagcagt
     9841 tcagcttcag attcaaccat cagaacagcg gcttcagtac cggcaacaac cagatccagt
     9901 ttgctctctt tcagctcgtc ctgagtcggg ttcagtacgt actggtcatt gatgtaacct
     9961 acgcgagcag caccaatcgg accattgaac ggaataccag acagagacag tgctgcggaa
    10021 gcaccaatca tcgcgacgat atccgggtta acttgcgggt taacagaaac cacggtggcg
    10081 ataacctgaa cttcgttgac gaagccttcc gggaacagcg ggcgaatcgg gcggtcaatc
    10141 agacgcgcga tcagggtttc gccttcgctt ggacgacctt cacgacggaa gaagctaccc
    10201 gggatacgac cagcagcgta ggtacgctcc tgatagttaa cggtcagtgg gaagaagtcc
    10261 tgacctggtt tggctttttt ctggccaaca acggtaacaa ataccgcggt gtcatccatg
    10321 ctaaccataa cagcggcagt agcctgacga gccatcatgc cggtttccag agtcacggtg
    10381 tgttggccgt actggaattt acgaacgatc ggattaagca atgtaatatc ctttctcttt
    10441 cttagacagt accttacggc actggtgtta atacccgatc ttctgcgcat cctcgcgact
    10501 aatgacaacc ctaacccagc tctatgtggg taaagcctct cattagccgc gcgaacctct
    10561 gcaacggaag atcattcata gcaacaatac attagtttcc agtgaattgc tgccgtcagc
    10621 ttgaaaaaag gggccactca ggcccccttt tctgaaactc ggcaggaatt agcgacgcag
    10681 acccaggcgc tcgatgagct gggtgtaacg tgctacgtct ttacgtttca ggtagtcgag
    10741 cagtttacga cgctgagaaa ccatgcgcag cagaccacga cggctgtggt gatctttttt
    10801 gtgctctgca aagtggccct gcaggtggtt gatctgtgca gtcagcagtg ctacctgaac
    10861 ttcggtagaa ccggtgtcgt ttgcgtcacg accaaactca gaaacgattt tagctgttgc
    10921 ttcagtactt agagacattt taaaactcca aagtatatag aatgaaagga cgccgatctc
    10981 taattcagcg atcccagtgt acgttacgca aagtgttaaa caatttacgc gacgttaagc
    11041 ggcagtattc tactcgtagc gacttgttat cgcaagacgg ttaacattac gccgggtatt
    11101 caaccaccag gcgacgaggc gcgacgcggc cttcatcgtc aatttcgccc ataccgataa
    11161 acttgccgtt ctcaccttct gtaacgcgaa ccagtccttc cagcggcgca ccggatgtac
    11221 gaactgggtt accatttttg aagtaaacag aagacgttaa cggaagattc accaccgggt
    11281 agtccgaagc tggactgtcc attggcatca gtaatggatc aagtaactcc gcagccggaa
    11341 tatcctgctg ttcggcttgt tcgaccagtt cacgcagatg ttccagggtc accatccgtt
    11401 caaccggata tttacttacc gccagacgac gcaggtaaat aacatgcgcg ccacaaccga
    11461 gtttttcacc caggtcatca atgatggtgc ggatataagt gccttttgag cagtgaattt
    11521 ccagctccag ctcattgcct tcgtggcgaa taaacagcaa ttcataaatg gtaatcgggc
    11581 gcgcttcacg cggtacttca atgccctgac gcgcatattc gtacagtttt ttaccctgat
    11641 atttcagtgc tgaatacatc gaagggatct gttcgatatc gccacggaaa gtatccagcg
    11701 ccgccgccag ttgctctgcg ctaaaggtta ccggacgttc ttcaacgatt tgtccgtcgg
    11761 catcagaagt atcggtacgc tgtccaagac gcgcaatgac ccgatagcgt ttgtcggagt
    11821 ccagcagata ctgggaaaac ttcgtcgctt ccccgaagca aattggcaac atgccagttg
    11881 ccagcgggtc cagcgcaccg gtatgcccgg cacggttggc gttataaatc cgtttcactt
    11941 tttgcagcgc atcattgctg gacataccct gcggtttatc cagcaacaaa acgccgttaa
    12001 tgtcgcgacc gcgacgacga ggacgactca ttagtcctcc ttgctgtcgt ccgggttaac
    12061 acgacgttct tcgtcatgtt tgaccacgct ggtcaccagg tttgacatgc gcatcccttc
    12121 aaccagagag ttgtcgtaga agaaggtcag ttccggcacg atacgcaggc gcatcgcttt
    12181 ccccagcagg ctgcggatga aaccagaagc ttcttgcaac gctttgatgc ccgctttaac
    12241 cgcgtcttca tctttgtcgt tgaggaacgt cacatatact ttggcatacg ccaggtcgcg
    12301 agacatttcg acaccggaaa cggtggtcat catgcccagg cgaggatctt taatttcacg
    12361 ctgcaggatg agagcgatct ctttttgcat ttcctgcgct acgcgctgcg ggcgaccaaa
    12421 ttctttcgcc ataataaatt ctcctgacaa aaaagggact gttagcccct ttttaaaatt
    12481 aatttcaggt ggaagggctg ttcacgttgg cctgataaga cgcgccagcg tcacatcagg
    12541 caatccatgc cggatgcggc gtaaacgcct tatcccgcat ggaaccctaa aaaccttaag
    12601 cgatggtacg ttggatctcg atgatttcga atacttcgat cacatcgcca gtgcggacgt
    12661 cgttgtagtt cttaacgccg ataccacatt ccataccgtt acggacttcg ttaacgtcat
    12721 ctttgaagcg gcgcagggac tccagctcgc cttcgtagat aaccacgttg tcacgcagaa
    12781 cgcggatcgg gttgtgacgt ttaaccacac cttcggtaac catacagcct gcgatggcac
    12841 caaatttcgg cgatttgaac acgtcacgaa cttccgccag accgataatc tgctgtttca
    12901 gttccggaga cagcataccg ctcatcgccg ctttcacttc gtcaatcagg ttatagatga
    12961 cggagtagta acgcagatct aggctttccg cttcaatcac tttacgtgca gaggcatcag
    13021 cacgtacgtt gaagccaacc aggatggcgt tggacgccgc agccagggtg gcgtcggttt
    13081 cggtgatacc acctacgcca gaaccgatga tcttcacttt aacttcgtca gtagacagtt
    13141 tcagcaagga gtcggagatc gcttccacag aaccctgtac gtctgccttc aggacgatgt
    13201 tcacttcgtg aacttcgcct tcggtcatgt tggcgaacat gttctcgagt ttagatttct
    13261 gctgacgcgc cagtttaact tcgcggaatt taccctgacg atacagtgca acttcacgcg
    13321 ctttcttctc gtcacgtaca acggtaactt catcacccgc agccggtacg ccggacaggc
    13381 cgaggatttc caccggaatg gacggacccg cttccagcac ttcctgaccc agttcgttac
    13441 gcatcgcacg aacacgaccg tattcgaagc cacacagaac gatatcgccc ttgtgcagag
    13501 taccttcacg taccagaacg gtagcaaccg gaccacgacc tttatcgagg aaggattcga
    13561 taaccgcacc gctcgccata cctttacgta ccgctttcag ctccagaact tccgcctgca
    13621 gcaggatagc gtccagcagt tcatcgatgc cggtacccgc tttcgcagat acgtgtacga
    13681 actggctttc accgccccac tcttctggca ggatgccata ctgggagagt tcgttcttaa
    13741 cacgatccgg atcggcttct ggtttatcaa tcttgttcac tgcaaccacc accggtacct
    13801 gcgccgcttt cgcgtgctgg attgcttcga tggtctgcgg catcacgccg tcgtcggcag
    13861 caacaaccag gactacgatg tccgttgcct gcgcaccacg agcacgcatt gaagtaaacg
    13921 cggcgtgccc tggggtgtcc aggaaggtga tcatgccgtt ttcagtttca acgtggtatg
    13981 caccaatgtg ctgggtaatg ccgcccgctt cgccagaggc cactttcgtt gaacgaatgt
    14041 agtccagcag agaggtttta ccgtggtcaa cgtgacccat gatggtcaca accggcgcgc
    14101 gcggttcagc cgcagccccc gtgtcacggt cgctcattac cgcctcttcc agctcgtttt
    14161 cacgacgcag gataactttg tggcccatct cttcagcaac cagctgtgcg gtttcctgat
    14221 cgataacctg gttgatggtt gccattgcgc ccagtttcat catcgctttg atgacctgag
    14281 agcctttaac cgccatcttg ttcgccagtt cgccaacggt gatggtttcg ccgatcacaa
    14341 cgtcacggtt aacggcctga gctggcttct ggaagccttg ctgcagggaa gaacctttac
    14401 gttttccgcc tttacctcca cgtactgctg cgcgagcttc ttcacgatca gcttttgatt
    14461 cagcgtgttt gttgcctttc ttcggacgcg ctgctttcgc gttacgacca cggccacggc
    14521 cgccttcgac ttcacgatcg ctttcgtctt ctgcctggcg agcatgttga gaagtagtga
    14581 cgtgataatc gctggaatct tcagtcggtt ccgcgttatc agtccatttg ttttcttccg
    14641 ccatacgacg tgcttcttca gcaacgcgac gtgcttcttc ttcgagttta cgacgcgctt
    14701 cttcttcagc tttacgcttg agctctgcag cttcctgctc acggcgggct ttttcagcct
    14761 gggcgttttt agtcatatcg tcttgttgat tgctcacttt gtctttttcc gcagcttcac
    14821 gtttcgcttg ttcagcagct tcacgcttag cttgttctgc ggcctcacgt tcagcttttt
    14881 gttgcgcctc gcgtttagcc gattcttctg cctcacgacg ggcttgctct tccgcttcac
    14941 gctgcgcttg ctcttccgct tcacgctgcg cttgctcttc cgctgcaagg cgttcagcct
    15001 cttgcggatc gcgtttcaca aaggtgcgtt tcttgcggac ttcgatttgt accgatttgc
    15061 tttttccacc ggtaccagga atgttaaggg tgctgcgtgt tttacgttgc agcgtcaatt
    15121 tgtccgggcc tgaatttttc tgattcaggt ggtcaatcaa agtctgtttc tcttgtgcgg
    15181 acacagagtc gtcagcagac ttccggatac ctgcatcagc aaattgctgt accaggcgtt
    15241 ccacggaggt ctgtcgctct gcggccagcg ttttaatcgt tacatctgtc atgctgttcc
    15301 ttcctgctac agtttattac gcttcgtcac cgaaccagca aatattacgg gcagccataa
    15361 tcagtgctcc ggctttttcg tcggtcaccc cttcgatatc agccagatca tcaatgccct
    15421 gttcggcgag atcttccagc gtacaaacgc cacgggcggc cagtttgaat gccaaatcac
    15481 gatctatccc ttcaaggttc agcagatcgt cagccggttt gttatcaccg aggctttctt
    15541 cctgggcctg tgcaatggtg gccagtgcat ttttagcacg ctcgcgcagt gcttcaacgg
    15601 tcggctcatc aaggccttcg atttccaaca gctctttcat cggcacatag gccagttctt
    15661 ccagcgtcga gaagccttct tctaccagaa cagtcgcgaa gtcttcgtcg atgtcgagat
    15721 atttggtgaa ggtgtcgatc gctgcgtgcg cttccgcctg atgcttagcc tgcaggtcgt
    15781 caacggtcat cacgttgagt tcccaaccgc tcagctgcga agccagacgc acgttctgac
    15841 cgttacggcc aatcgcctgc gccaggttac cggcttcaac ggcgatatcc atggtgtgtt
    15901 tatcttcatc caccacgata gaagcaacgt ctgccggtgc cattgcgtta atcacaaact
    15961 gcgccgggtt atcatcccac aggacgatat cgatacgctc gccgcccagt tcagtagaaa
    16021 ccgcctgaac acgcgcgcca cgcataccta cacaggcacc taccggatcg atacgtttat
    16081 cgttggtttt caccgcgatt ttcgcacgag aacccggatc gcgagccgct gctttaattt
    16141 caatcacttc ttcgccgatt tctggcactt caatacggaa cagttcgatc agcatttccg
    16201 gcttggaacg agtgacgaac agttgcgcgc cacgcgcttc cgggcgaacg gaatagagca
    16261 cgccacgaac gcggtcgcca gggcggaagt tttcacgcgg cagcatatct tcgcgcagga
    16321 tcacggcttc agcattgttg cccagctcca gagagatgtt gtcgcggttt acttttttca
    16381 ccacgccggt gatgatttca ccttcgtgtt cacggaactg atcaaccacc atcgcacgtt
    16441 cggcttcacg cactttctgc acgataacct gttttgccgt ctgggtagtg atacggtcaa
    16501 aggtaacaga ctcaatctga tcttcaacgt aatcgcccag gttcaggctt tcatcttcat
    16561 aacgtgcggc ttcaagggtg atttccttgg tcggctgggt gacttcatca acaactaacc
    16621 agcgacggaa ggtgtcaaaa tcaccgcttt tgcgatcgat ctgtacgcgg acgtcgatct
    16681 cttgttcata ttttttcttt gttgctgtcg ccagcgcgct ttccaatgct tcgaaaatct
    16741 tctcgcgagg tagcgccttt tcattggata cggcttcaac tacagccaaa atttctttgt
    16801 tcatcgcggg cttttcacct catccagact attaaaagtg gggaaccagg ttcgccttct
    16861 ggatattact cagcgcgaac acttcatctt taccttcgac ggtaactgtg atcatttcac
    16921 cgtctaccgc tttgataacg ccctgccatt tacgacggtt ttgtaccgcc atacggagaa
    16981 ccagagtcac ctcttctccg acaaaacggg cgtagtgttc agccgtgaac agtgggcgat
    17041 cgagacccgg tgaggagact tccaggttat aagcaacggt gatgggatct tcaacatcca
    17101 gcacagcact tacctggtgg ctcacatcag cacaatcatc aacattgatg ccatcttcac
    17161 tatcaatata gatgcgcagt gtggatgtgt gaccgcgaat aaattcgatg ccaaccagtt
    17221 caaaacccag ggcctcaact ggcgcagtaa tcatctctgt taatttttgc tctaatgtgg
    17281 acaagcccac ccccaagaca taaaaaaagg gcctaaagcc cagttattct gtagtcagat
    17341 aacaaaaaac cccgataaat cggggcttta tataactgaa ccctataacc gcaactgcgg
    17401 tctggagcac tttccagaag gattttttca aatcccacta cgaaggccga agtcttcaca
    17461 gtatatttga aaaaggactc taagggaaa
//
LOCUS       DADKRT010000086        17483 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.087, whole genome shotgun sequence.
ACCESSION   DADKRT010000086 DADKRT010000000
VERSION     DADKRT010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17483
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.087"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(34..2631)
                     /gene="topA"
                     /locus_tag="JQ356_002371"
     CDS             complement(34..2631)
                     /gene="topA"
                     /locus_tag="JQ356_002371"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HAY4622441.1"
                     /translation="MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
                     TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
                     PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV
                     DGKWVEGKK"
     gene            3011..3262
                     /locus_tag="JQ356_002372"
     CDS             3011..3262
                     /locus_tag="JQ356_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HAY4622442.1"
                     /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
                     FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="JQ356_002373"
     CDS             complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="JQ356_002373"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HAY4622443.1"
                     /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
                     NNLSEQYKEMKEELAAALMGSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
                     VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
                     LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKY
                     IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
                     GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
                     RLLLRWWQRGQKPLM"
     gene            4567..5325
                     /locus_tag="JQ356_002374"
     CDS             4567..5325
                     /locus_tag="JQ356_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HAY4622444.1"
                     /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
                     NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGL
                     LGDICPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
                     DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
     gene            5322..5913
                     /gene="cobO"
                     /locus_tag="JQ356_002375"
                     /pseudo
     CDS             5322..5913
                     /gene="cobO"
                     /locus_tag="JQ356_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
     gene            complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="JQ356_002376"
     CDS             complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="JQ356_002376"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HAY4622445.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV
                     TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV
                     QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QVSGGRRSGGRNNG"
     gene            complement(7036..8931)
                     /locus_tag="JQ356_002377"
     CDS             complement(7036..8931)
                     /locus_tag="JQ356_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HAY4622446.1"
                     /translation="MAGKFRCILLLIAGLFVSSLSYAENPEIPSYEEGISLFDVEATL
                     QPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEP
                     WHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF
                     EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVL
                     YRWPHALLSNAPAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVD
                     VIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQYDKNQQILICV
                     NEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSLF
                     YRPDTFLQWGGLAILAIILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFAR
                     DDDKPCVNRAIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVCLTGYLTGM
                     GYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISAN
                     LGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAG
                     GGGGGGW"
     gene            complement(8959..9579)
                     /locus_tag="JQ356_002378"
     CDS             complement(8959..9579)
                     /locus_tag="JQ356_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HAY4622447.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI
                     EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL"
     gene            complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="JQ356_002379"
     CDS             complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="JQ356_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HAY4622448.1"
                     /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD
                     HDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ
                     QTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
                     FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE
                     HHGDAMEVAQCQQSPNERTQLTTLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE
                     GVWQLWEQPQNTTEREL"
     gene            10595..10639
                     /gene="trpL"
                     /locus_tag="JQ356_002380"
     CDS             10595..10639
                     /gene="trpL"
                     /locus_tag="JQ356_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HAY4622449.1"
                     /translation="MKAIFVLKAWWRTS"
     gene            10731..12293
                     /gene="trpE"
                     /locus_tag="JQ356_002381"
     CDS             10731..12293
                     /gene="trpE"
                     /locus_tag="JQ356_002381"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HAY4622450.1"
                     /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRV
                     LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED
                     LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQ
                     LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
                     RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     gene            12293..13888
                     /gene="trpD"
                     /locus_tag="JQ356_002382"
     CDS             12293..13888
                     /gene="trpD"
                     /locus_tag="JQ356_002382"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HAY4622451.1"
                     /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
                     ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQRKLEPTNTLQPILEKLYQAQTLSQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
                     QTVLEVLRSGSAYDRVTALAARG"
     gene            13892..15250
                     /gene="trpCF"
                     /locus_tag="JQ356_002383"
     CDS             13892..15250
                     /gene="trpCF"
                     /locus_tag="JQ356_002383"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309861.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HAY4622452.1"
                     /translation="MQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDALQ
                     GARTAFILECKKASPSKGVIRDDFNPARIAAIYKHYASAISVLTDEKYFQGSFDFLPI
                     VSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGG
                     LTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGIN
                     TYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGA
                     IYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLH
                     GNEDQLYIDTLREALPTHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWS
                     LLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTLR
                     AY"
     gene            15262..16455
                     /gene="trpB"
                     /locus_tag="JQ356_002384"
     CDS             15262..16455
                     /gene="trpB"
                     /locus_tag="JQ356_002384"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016158396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HAY4622453.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
                     FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVCEFQRMIGEETKAQILE
                     REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
                     AFKTLCLHEGIIPALESSHALAHALKMMRETPEKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            16455..17261
                     /gene="trpA"
                     /locus_tag="JQ356_002385"
     CDS             16455..17261
                     /gene="trpA"
                     /locus_tag="JQ356_002385"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HAY4622454.1"
                     /translation="MERYESLFAQLKERKEGAFVPFVTLRDPGIEQSLKIIDTLIEAG
                     ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
                     ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD
                     DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
                     QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS"
BASE COUNT         4220 a         4673 c         4345 g         4245 t
ORIGIN      
        1 cctttgttta taaaaacctg acagaattaa aggttatttt tttccttcaa cccatttgcc
       61 atcaacataa aatgctgacc agccagtcgc ctttccgtct ttttccgaag agacatattg
      121 ctgtttggtt ttacggctaa agcgaaccat ggtcttatta ccttccggat cctgctgtgg
      181 cgcatcggcc agataacgca gtttttccgg cagacggtcg cggaagcgat aaagctcttc
      241 caccagtggc gcacgcgttt cacgcgattt cgggaaagtg ttggcagcca ggaaaacacc
      301 cgcagcgccg tcacgcagca cgaaataagc atctgatttt tcgcacggca gctcaggtaa
      361 tggcaccgga tcttctttcg gtggtgccac ttcgccgtta cgtaaaatct tacgtgtgtt
      421 tttacactct tcgttggtgc aggccatgta tttaccgaaa cgccccattt tcaggtgcat
      481 ttcagagcca catttttcac actcaacgat cgggccgtca taacctttaa tgcggaattc
      541 gccctcttcg atctcgtaac cgtcgcaggt tgggttatta ccacagacat gcaacttacg
      601 tttcggatcg atgagatagc tgtccatcgc cgtgccgcat ttcgggcaac gacgttttgc
      661 gcgcagcgcg ttggtttcag cgtcttcgcc ttccagtacg ttcagcactt cgttttccgg
      721 caccaggtta atggtggttt tgcaacgctc tttcggcggc agcgcataac cagaacagcc
      781 aaggaatacc ccggtgctcg ctgtgcgaat ccccattttg cgaccacaag tcgggcagtc
      841 aatgctggtc agaaccatct ggttcgggcg cataccaccc tcttccggat ctttttcagc
      901 tttatctaac tgctgggtga aatccgagaa gaagtgatcc agtacagctt tccactctgc
      961 ttcgtgattt gccacctggt cgaggctgtt ttccatctgt gcggtgaagt cgtagttcat
     1021 taactcgcgg aaattttctt caaggcgatc ggtgacgatt tcgcccattt tttccgcata
     1081 gaaacgacga ttttctactc gcacgtagcc acgatcctga atggtcgaaa tgatcgacgc
     1141 ataggtagac ggacgaccga taccgcgttt ttccagctct ttaaccagcg atgcttcact
     1201 gaaacgggct ggcggcttgg taaagtgctg ggctggtgta agttcaacga gcgtcagagc
     1261 atcgccttta ttaactgctg gtaagatgcg atcttcatcg cctttacgca acgcaggcat
     1321 cacttttgtc cagccatcaa aacgcaaaat acgacctcgt gctttcaggc ggaaatcgcc
     1381 cgcaccaacg gtcagcgtcg tggagtcata tttcgctggg gtcatctggc aggctacgaa
     1441 ctgacgccag attaactggt acagtttctg cgcatctgct tccatatcct tcagcgattc
     1501 cgccatcaca ttgacgtcag aaggacgaat cgcttcgtgc gcttcctgtg agttttcttt
     1561 gctggcgtac tgattcggac tttccggcag atatttctta ccaaaattat cgctgatata
     1621 accgcgaacc atatttaccg cgtcctgact caggttagtg gagtcggtac gcatgtaagt
     1681 gatatagcct gcttcataca aacgctgcgc catcatcatg gtttttttca cgccaaatcc
     1741 aagacgggtg ctggcagctt gttgcagcgt agaggtaata aaaggagcgc caggtttact
     1801 ggttgtcggt ttgtcttcac gttccagcac gctgtagcgc gctttttcca gcagacttac
     1861 cgcagcctga gtttgttctt tgttgaccgg acggaacggt ttgtcgttct gatgagtcac
     1921 ctgtaacgcc aacgcttcac cagatggcgt ggtcgtgctg gcatcgactt cccagaactc
     1981 ttccggcacg aacgctttaa tttcacgctc acgctcgacc accaggcgaa ccgccaccga
     2041 ctgcacacga ccggcagaca gaccacgagc gatctttttc catagcagcg gcgaaaccat
     2101 ataccccacc acgcggtcca taaagcgacg cgcctgctgg gcattaacac gatcaatatt
     2161 cagctcaccc ggtttgttaa atgcctggcg gatcgcgttt ttagtaattt cgttaaacac
     2221 cactcggcta tagcgcgcat catcaccccc aatcacttcc cgcaggtgcc atgcaatggc
     2281 ttccccttcg cggtcaaggt cggttgcgag atagatgtgg tcggcttttt cagccagttg
     2341 tttcagttca gagacgacct tctctttacc aggcaacact tcatagtgcg cctcccaatt
     2401 gtgccacggg tcaaccccca tacggttgac gagagcgcca cgttcatcct ttttaggctt
     2461 tttagccgtc ttggtggagg tagagtcggc actctttttg gcagctgagc cactggtcgg
     2521 caaatcgcgg atgtgaccga cgctggattt caccacgtag tcactaccca gatacttgtt
     2581 gatcgttttg gcttttgccg gggactcaac gatgacaaga gctttaccca tattcacctt
     2641 acctaatttg attcttccag gaatgcgtcg cacgttgata aaccttccac tggcaacgag
     2701 ttaccgatat ggactcgttc tctgcggata tcaacccctt gtcgtgactc tgttcacgaa
     2761 aattcaggtg actgagttaa caggtcttgg cctacaggcg ctatagcacg acggaatttt
     2821 ggtcgaatgt caagcaaatc tattgccaga ttgacgaaag cgtcacactg tacctgataa
     2881 aatccgatac gcaactttat tagcatgcaa aatccaaagt tgccagtaag gcgctcttgc
     2941 caccagcgtg gtatatttgt ctgcaagcca tgcctggcgt agactaatgt ccttatttaa
     3001 ggagtaaata atgaacaaag agacacaacc catcgaccgc gaaacgctgt tgaaagaggc
     3061 caacaaaatc attcgtgagc atgaggatac gctcgcaggg attgaagcca ccggcgtcac
     3121 gcagcgtaat ggcgtgctgg tatttaccgg cgactacttt ttagatgaac aaggattgcc
     3181 aacagccaaa agcaccgcgg tgtttaatat gttcaaacac ctggcccatg tgctttcaga
     3241 aaaatatcat ctggttgatt aaagcaaaac gcgaggtctt agcctcgcgt ttgtctttta
     3301 catcaatggc ttttgacccc gctgccacca gcgtagcaac aatcgatcgg cgctctctgc
     3361 cgcgctgccg gtgaatcggt caatgagtcg tttacgctgc atatagcgta cattaaccac
     3421 ttcacggcct tccatcaggc taagaataac ttcatcactg gtgttgattt catcaaccag
     3481 gcctttctct accgcctgtt gtccgtacca gtgttcacct gttgccacct gttcaatatc
     3541 cagagacgga cgcatacgct tcacaaaatc tttaaacaac tgatgcgttt cgttcaactc
     3601 ttcgcggaat ttctcccgcc cttcttcggt attttcaccc agcaacgtca gagtacgctt
     3661 atactgcccg gcagtgtgca gttcgatatc aatatatttg cttttcagga agcggttaaa
     3721 gttgggcatt tgcgccacca ccccaatgga acccacaata gcaaacggtg cggaaacaat
     3781 tttgtccgcc acacaggcca tcatgtaacc gccgctggca gcgactttgt ctaccgtaac
     3841 agttaaagga atgtttttat cacgcagacg ctgcagctgc gaagccgcca acccgtaacc
     3901 atgcaccatg ccaccagggc tttccagacg gagcacaacc tgatcctgcg gtttgaatgc
     3961 tgcgagtacc gccgttatct cttcacgtag cgagttcact tcatgggcgt ccatgctgcc
     4021 tttaaaatcc agcacccaga cgcgaggttt actgtcagtt gccacctcgc ccagtttggc
     4081 tttcgctttt gctgctttcg cttcttgctt gtgctttttc ttctgcgctt tgtgccactg
     4141 tttttgctga tgtgagccca tcagcgccgc ggccagttct tctttcatct ccttatactg
     4201 ttcgctgaga ttgttgaccc gtaactcgcc acgctggcgt ttattacgtt gagcaacatt
     4261 gacaataatg gcggcaatcg ccgcaatcgc tagcacaacg gtaacgattt tcgccaaaaa
     4321 caaaccatat tcagacaaca attccacgag tccccacctt ggttaaacaa cgctttggct
     4381 cacagtttac aacaggcatg ttaagccgtc tcgcagagat gttattgcag cgaaagtatg
     4441 acaaagtatc cattttgcgg tgttatcgcc ccaggctgat tgaaatgccc ttctgtttca
     4501 ggcataaagc cccaaagtca taaagtacac tggcagcgcg acagacaacg tcgttgagga
     4561 gtagccatgc attaccagcc aaaacaagat ttactcaatg atcgcattat cctggtgacg
     4621 ggagccagcg atgggattgg tcgtgaagcc gcgatgacgt atgcacgcta tggtgcgaca
     4681 gtgattctgt tgggccgtaa tgaagaaaaa ttacgtcagg tagccagcca cataaacgaa
     4741 gaaactgggc gtcagccaca gtggtttatt ctcgatttgc tgacctgcac gtccgaaaat
     4801 tgccaacaac tggcacagcg cattgtcgtt aattatccgc gtctggatgg tgttttgcat
     4861 aatgccggat tgctcggcga tatttgccca atgagcgaac aaaatccgca ggtctggcag
     4921 gacgtcatgc aggtcaacgt taatgccacc tttatgctca cccaggcact gcttccttta
     4981 ttactcaaat cggacgccgg ttcactggtc tttacttcat caagcgttgg acgtcaggga
     5041 cgagctaact ggggtgcata tgcagcgtcg aaatttgcca ccgaagggat gatgcaggta
     5101 ctggccgatg aatatcagca gcgcctgcgc gtcaactgca ttaacccagg cggtacgcgc
     5161 accgcaatgc gcgcaagcgc cttcccgacc gaagatccac agaaacttaa aacacccgct
     5221 gatatcatgc cgctctacct ctggctgatg ggcgatgaca gccgccgtaa aaccggcatg
     5281 acctttgacg cccaaccggg ccgtaaacca ggaatttccc aatgagtgat gaacgctacc
     5341 aacagcgtca gcagcgagtg aaagaaaaag tagatgctcg tgtggcacag gccccaggat
     5401 gaacgcggta ttatcatcgt ctttaccggc aatggaaaag gcaaaaccac cgcggcattt
     5461 ggtacggcaa cacgcgcagt tggtcacgga aaaaaagtgg gcgtcgtgca gtttattaaa
     5521 ggcacctggc ctaatggcga acgcaatctg ctggaaccac atggcgttga gtttcaggtg
     5581 atggcaacgg gctttacctg ggatacacaa aaccgcgagt ctgataccgc cgcctgccgc
     5641 gaagtctggc aacatgcaaa gcggatgctt gctgattcct cactggatat ggttttgctt
     5701 gatgaactga cgtatatggt ggcgtatgac tatttgccac tggaagaagt ggtgcaggcg
     5761 ttaaatgaac gtccacatca acagacggtg attatcacgg gtcgaggctg tcatcgggat
     5821 attcttgaac tggcggatac ggtaagtgag ctgcgcccca tcaaacatgc gtttgatgcc
     5881 ggtgttaagg cgcaaatagg gattgattat taatctgtaa aaatgccgga tatgacgtcc
     5941 ggcatacttt gattaaccgt tattacgccc gccagaacga cgaccgccgc tcacctgact
     6001 gtgacgtttc accgcacgac gaatctgatt agccttcatg cgacgacggt ctttttctac
     6061 agcgacttta gagctggttt ctggcggaag ctccaccagt tcgcgcagat agttagtctg
     6121 ggcgaggtcc agctccgtcc agccaccgcg tggcagacct tttggcagtg ggatatcacc
     6181 gtaacgaaca cggatcaggc ggctcacctg cacaccaacc gcttcccaca gacgacgaac
     6241 ttcacggtta cggccttcgg tcagagtcac gttgtaccac tggttgatcc cttcgccgcc
     6301 gctgaacttg atggttttaa aagctgccgg accatcttcc agttgcacgc cacgactcaa
     6361 atcacgcagt ttcgcgtcgt caacctgacc aaatacacgc acggcgtatt cacgttcaac
     6421 ttcacggctt ggatgcatta aacggtttgc cagttcacca tcggtggtga acagcagcag
     6481 accacaggtg ttaacgtcca gacgacctac ggcaatccag cgtgcgccac gcagctttgg
     6541 cagacggtca aacaccgtcg gacgcccttc cggatcgtta cgggtacaca actcaccttc
     6601 cggtttgtaa taggccagaa cgcgacaaat ttgttcagcg gactcacgta ccgaaatcag
     6661 atgaccatcg atacgaattt tcagcccagg ggtaacttca acgcgatcgc cgagtttagc
     6721 aattttgcca tcaacactca cacgaccggc ttcaataata gattcgattt cacggcggga
     6781 gccgtggcca gcgcgggcca gcactttctg taatttttcg ctcatagagc ttccttttgg
     6841 tgtcgccttc ccaggcgtct gatatgcttt tgtgcaacag tgagtcagaa cttacatctg
     6901 actcactgat agtaaagtct gtttgaactc ttcaggcctt aagtaaacga ctcgacgttt
     6961 atcggcctgg ctttgaggcg caacatacta cactatcttt atggttaaag cttgtttcga
     7021 ttaacatcag cttaattacc agccaccacc gcctccgcca cccgcgccgc cgccagcacc
     7081 accaccggaa taacttcgcc ccaacaaact ggtattggcc ccgcaactta ggtgcgtctg
     7141 taatgagaat aaaacgccgt tacgggcaat ctctggagcg cgaatcgccg aagaaagcga
     7201 aggggcaatg cgtaacgccc attccctccc caaatttgcc gatatagccc aacctagcaa
     7261 cgcgtaatcc agtttccgtg tttccccttt ccgccgacgt ccactgtgtg ttgctgcctc
     7321 tttacgcgca agatagttaa cgatagcttc accgcgggca taacgttgct gcccagtttg
     7381 ggtaaacttt ggcagaaaaa tataccccat gccagtgaga taaccggtca ggcaaacagc
     7441 gctaaaataa cccgctggca tataccagta aaagaataca tctccgacat tgatatagag
     7501 agaatagaag gccacgcctg aacaaatcag tggtaaaaac aaagtgatga ttgcacgatt
     7561 aacgcaaggc ttgtcatcat cgcgggcaaa caaaagctca agggaacaaa ataaaaaagg
     7621 aataatccag cagatcataa taaacatatc gcctaccaga ctcattcctg cccaacctac
     7681 gggactcagg ttaccgtaga gaatgatcgc caatattgcc agtccacccc attgcaaaaa
     7741 cgtatcaggc cggtaaaaca aagacttttt acgcggcaga taaaatttct gcatccgtaa
     7801 aaatgccctg cgtaagactc tgttgcgtct ccccgtaaga acgaccttat cgcctttacg
     7861 aaataacgct tccagtaata actgctctgc gggcagtaat acctcattat ttctggtcgc
     7921 gccttcatta acacaaatca ggatttgctg gttcttatca tactgatctt ccagatgaat
     7981 ttttcccttc acgatcagat ttacgatatc ggcacagaaa cctttatcgt cgtaaaccag
     8041 cttcgcatcg agacgtaaca tgccgggcgt gtaatctggc ggaatgacat cggtttcaat
     8101 cacatctacc ggcgtaaatt gcggcctgcg cttccagaga tataaccatc cacaaaccag
     8161 gaatagacac ggaaaccaaa ttaacaacga tgacgtggag ggtaaaagaa gatggctgaa
     8221 aatattcgtc gtttgtggag ccggggcatt gctaagtaac gcgtgaggcc agcggtagag
     8281 taccgtgaaa tcttcacgat aaaacggatc gcgggattct attcttccgt cctcaaggat
     8341 gcggccattt cgatatgtgt cgccctcttc tccagtaaag agatcgattt cgctaaatgg
     8401 attacccgcg atatcaggga acttgagtga aaatcgggtc ttatagattt caaacggcca
     8461 gtggttacca gtcacgttcc agattaacag atctgaatct ccctcacgca ggaaagcatt
     8521 tttaacctga taatgaattt gataatgata gtcgccttga ggcaagaaac gttgtttatc
     8581 gcccacgaca atactcatta acccgatatg ccagtcaaga tgccagggtt caggaatacc
     8641 atcacgagtg acgccaacaa tatgatagtt cagcagtgca gcgtccccat caggctgcat
     8701 ccagagtcgt ggtaaatcac gataaaatcc gtgcttaatc tgctgatttc gcgcctgaaa
     8761 atgaatattt tctttgatgt cgagcacccc atccggttgc agagtggctt caacatcaaa
     8821 gagcgagatc ccttcttcat aagaagggat ctccgggttt tctgcataac ttagagatga
     8881 tacaaacagc cctgctatca acagcaaaat gcagcgaaac ttccctgcca tagtcttcca
     8941 tccgtggaac gcaatttgtc ataagaaagg cttcacatca cccacgcctt cacgcaccac
     9001 gaccggcgta tcatcggtaa gatcaatgac cgttgtcggt ttctgtccga gatagccgcc
     9061 gtggataatc aaatccacct gtttttccag acggtcttta atttcttctg gatcggattc
     9121 ggtaaattcg ctgcctggca gcattagcga agtggaaagc atcggttcgc ccagtgcttc
     9181 aagcaacgcc tgcgcaatcg ggttagaagg cacacgcata ccgatggttt tgcgtttttc
     9241 ctgcaacaga cggcgtggca cctccttcgt ccccttcagg atgaaggtat agttgcccgg
     9301 cgtgttgttt ttcattaaac gaaacgcaac gttatccacg aatgaatagg tcgaaagttc
     9361 agaaagatcg cgacacatca gggtaaagtt gtgaccgtcc ggcagctggc gaatacgaca
     9421 aatacgctcc atcgcgtttt tatcttcaat tttacagccg agcgcatagc cggaatcagt
     9481 tggataaaca atcaccccgc ctttacgcac gatctccacc gcctggttga tcagacgttg
     9541 ctgcgggtta tcaggatgaa tataaaaaaa ctggctcata attccctctc tgtggtgttc
     9601 tgcggctgtt cccatagctg ccagacgcct tcaacgcctg cgggcagcca gagtttacga
     9661 cccagttcga tccacgggca tggctgatga aaatcagatc cttgtgatgc ccataaatga
     9721 tgctgacgcg caagtgtcgt caactgggtg cgttcattgg gcgattgctg gcactgcgcg
     9781 acttccatcg cgtcgccgtg gtgttcggca aaatgcgcaa ccaatctttt cagccattta
     9841 gcactaagat tgtaccgccc aggatgagct agcaccgcct taccgccaga atgatgaatg
     9901 acatcaatag cttgttctat tgtacaccac tgtggcggaa cgtatccggt tttcccgcgc
     9961 gccagatact ttttaaagac atctgccatt gaactggctt tgccgcactc aacaaggaaa
    10021 cgcgcaaaat gaccgcgcgt cactgcgccg ccctgcgcca gtcgttgtgc gccttccagc
    10081 gccccaggta tttgcgcttt ttcaagtctt tcggcaattt gctgcgcccg ctgattgcgc
    10141 cgttctgtct gctgcgcgag gaactcacac attagcggat gagtaatatc aatattcagc
    10201 ccgacaatat gaatttcatg attttcccag accgtggaaa tttccacgcc gggaataaga
    10261 ttcagcgcca gtcccgaacg tgaaatttcc tctcttgctg gcgcgattgc agctgtggtg
    10321 tcatggtcgg tgatcgccag ggtgccgacg cgcatctcga ctgcacggtg caccaatgct
    10381 tctggcgtca ggcagccatc ggaagctgtg gtatggctgt gcaggtcgta aatcactgcg
    10441 taattcgtgt cgctcaaggc gcactcccgt tctggataat gttttttgcg ccgacatcat
    10501 aacggttctg gcaaatattc tgaaatcagc tgttgacaat taatcatcga actagctaac
    10561 tagtacgcaa gttcacgtaa aaagggtatc gacaatgaaa gcaattttcg tactgaaagc
    10621 ttggtggcgc acttcctgaa acgggcagtg tattcaccat gcgtaaagca atcagatacc
    10681 cagcccgcct aatgagcggg cttttttttg aacaaaatta gagaataaca atgcaaacac
    10741 aaaaaccgac tctcgaactg ctaacctgcg aaggcgctta tcgcgacaac ccgactgcgc
    10801 tttttcacca gttgtgtggg gatcgtccgg caacgctgct gctggaatcc gcagatatcg
    10861 acagcaaaga tgatttaaaa agcctgctac tggtagacag tgcgctgcgc attacagcat
    10921 taggtgacac tgtcacaatt caggcacttt ccggcaacgg cgaagccctg ctgacactac
    10981 tggataacgc cctgcctgcg ggtgtggaaa atgaacaatc accaaactgc cgtgtgctgc
    11041 gcttcccccc tgtcagtcca ctgctggatg aagacgctcg cttatgctcc ctttcggttt
    11101 ttgacgcttt ccgtttattg cagaatctgt tgaatgtacc gaaggaagaa cgagaagcaa
    11161 tgttcttcgg cggcctgttc tcttatgacc ttgtggcggg atttgaagat ttaccgcaac
    11221 tgtcagcgga aaataactgc cctgatttct gtttttatct cgctgaaacg ctgatggtga
    11281 ttgaccatca gaaaaaaaac acccgcattc aggccagcct gtttgctccg aatgaagaag
    11341 aaaaacaacg tctcactgct cgcctgaacg atcttcgcca gcagctgacc gaagccgcgc
    11401 cgccgctgcc ggtggtttcc gtgccgcata tgcgttgtga atgtaaccag agcgatgaag
    11461 agttcggtgg cgtggtgcgt ttgttgcaaa aagcgattcg caccggagaa attttccagg
    11521 tggtgccgtc tcgccgtttc tctctgccct gcccgtcacc gctggcggcc tattacgtgc
    11581 tgaaaaagag taatcccagc ccgtacatgt tttttatgca ggataatgat ttcaccctgt
    11641 ttggcgcgtc gccggaaagt tcgctcaagt atgacgccac cagccgccag attgagatct
    11701 acccgattgc cggaacacgc ccgcgcggtc gtcgcgccga tggttcactg gacagagacc
    11761 tcgacagccg catcgaactg gaaatgcgta ccgatcataa agagctttct gaacatctga
    11821 tgctggtgga tctcgcccgt aatgatctgg cacgcatttg cacccccggc agccgctacg
    11881 tcgccgatct taccaaagtt gaccgttact cttacgtgat gcacctggtc tcccgcgtgg
    11941 tcggtgagct gcgccacgat ctcgacgccc tgcacgctta ccgcgcctgt atgaatatgg
    12001 ggacgttaag cggtgcgccg aaagtacgcg ccatgcagtt aattgccgag gcggaaggtc
    12061 gtcgccgcgg cagctacggc ggcgcggtag gttatttcac cgcgcatggc gatctcgaca
    12121 cctgcattgt gatccgctcg gcgctggtgg aaaacggtat cgccaccgtg caagccggtg
    12181 ctggcatagt ccttgattct gttccgcagt cggaagccga cgaaacccgt aataaagccc
    12241 gcgctgtact gcgcgctatt gccaccgcgc atcatgcaca ggagactttc tgatggctga
    12301 cattctgctg ctcgataata tcgactcttt tacgtacaac ctggcagatc agttgcgcag
    12361 caatgggcat aatgtggtga tttaccgcaa ccatattccg gcgcagacct taattgaacg
    12421 cctggcgacg atgagcaatc cggtgctgat gctttctcct ggccccggtg tgccgagcga
    12481 agccggttgt atgccggaac tcctcacccg cttgcgtggc aagctgccca ttattggcat
    12541 ttgcctcgga catcaggcga ttgtcgaagc ttacgggggc tatgtcggtc aggcgggcga
    12601 aattctccac ggtaaagcct ccagcattga acacgacggt caggcgatgt ttgccggatt
    12661 aacaaacccg ctgccagtgg cgcgttatca ctcgctggtt ggcagtaaca ttccggccgg
    12721 tttaaccatc aacgcccatt ttaatggcat ggtgatggca gtacgtcacg atgcggatcg
    12781 cgtttgtgga ttccagttcc atccggaatc cattcttact acccagggcg ctcgcctgct
    12841 ggaacaaacg ctggcctggg cgcagcggaa actagagcca accaacacgc tgcaaccgat
    12901 tctggaaaaa ctgtatcagg cgcagacgct tagccagcaa gaaagccacc agctgttttc
    12961 agcagtggta cgtggcgaac tgaaaccgga acaactggcg gcggcgctgg tgagcatgaa
    13021 aattcgcggc gagcacccga acgagatcgc cggagcagca accgcgttac tggaaaacgc
    13081 cgcgccgttc ccgcgcccgg attatctgtt tgccgatatc gtcggcaccg gtggtgacgg
    13141 cagtaacagc atcaatattt ccaccgccag tgcgtttgtc gccgcggcct gtgggctgaa
    13201 agtggcgaaa cacggcaacc gtagcgtctc cagtaaatct ggttcgtccg atctgctggc
    13261 ggcgttcggt attaatcttg atatgaatgc cgataaatcg cgccaagcgc tggatgagtt
    13321 aggcgtatgt ttcctctttg cgccgaaata tcacaccgga tttcgccatg cgatgccggt
    13381 tcgccagcaa ctgaaaaccc gcactctgtt caacgtgctg ggaccattga ttaacccggc
    13441 gcatccgccg ctggcgttaa ttggtgttta tagtccggaa ctggtgctgc cgattgccga
    13501 aaccttgcgc gtgctggggt atcaacgcgc ggcggtagtg cacagcggcg gtatggatga
    13561 agtttcatta cacgcgccga caatcgttgc cgaactgcat gacggtgaaa ttaagagcta
    13621 tcagctaact gcagaagatt ttggcctgac accctaccac caggagcaac tggcaggcgg
    13681 aacaccggaa gaaaaccgtg acattttaac acgcttgtta caaggtaaag gcgacgccgc
    13741 tcacgaagca gccgtcgcgg cgaatgtcgc catgttaatg cgcctgcatg gccatgaaga
    13801 tctgcaagcc aatgcgcaaa ccgttcttga ggtactgcgc agtggttccg cttacgacag
    13861 agttaccgca ctggcggcac gagggtaaat gatgcaaacc gttttagcga aaatcgtcgc
    13921 agacaaggcg atttgggtag aaacccgcaa acagcagcaa ccgctggcca gttttcagaa
    13981 tgaggttcag ccgagcacgc gacattttta tgatgcgcta cagggtgcac gcacggcgtt
    14041 tattctggag tgcaagaaag cgtcgccgtc aaaaggcgtg atccgtgatg atttcaatcc
    14101 ggcacgcatt gccgccattt ataaacatta cgcttcggca atttcggtgc tgactgatga
    14161 gaaatatttt caggggagct ttgatttcct ccccatcgtc agccaaatcg ccccgcagcc
    14221 gattttatgt aaagacttca ttatcgaccc ttaccagatc tatctggcgc gctattacca
    14281 ggccgatgcc tgcttattaa tgctttcagt actggatgac gaccaatatc gccagcttgc
    14341 agccgtcgct cacagtctgg agatgggggg gctgaccgaa gtcagtaatg aagaggaact
    14401 ggagcgcgcc attgcattag gggcaaaggt cgttggcatc aacaaccgcg atctgcgtga
    14461 tttgtcgatt gatctcaacc gtacccgcga gcttgcgccg aaactggggc acaacgtaac
    14521 ggtaatcagc gaatccggca tcaatactta cgctcaggtg cgcgagttaa gccacttcgc
    14581 taacggtttt ctgattggtt cggcgttgat ggcccatgac gatttgcacg ccgccgtgcg
    14641 ccgggtgttg ctgggtgaga ataaagtatg tggcctgacg cgtgggcaag atgctaaagc
    14701 agcttatgac gcgggcgcga tttacggtgg gttgattttt gtcgcgacat caccgcgttg
    14761 cgtcaacgtt gaacaggcgc aggaagtgat ggctgcggca ccgttgcagt atgttggcgt
    14821 gttccgcaat cacgatattg ccgatgtggt ggacaaagct aaggtgttat cgctggcggc
    14881 agtgcaactg catggtaatg aagatcagct gtatatcgat acgctgcgtg aagctctgcc
    14941 aacacatgtt gccatctgga aagcattaag cgtcggtgaa accctgcccg cccgcgagtt
    15001 tcagcacgtt gataaatatg ttttagacaa cggccagggt ggaagcgggc aacgttttga
    15061 ctggtcacta ttaaatggtc aatcgcttgg caacgttctg ctggcggggg gcttaggcgc
    15121 agataactgc gtggaagcgg cacaaaccgg ctgcgccgga cttgatttta attctgctgt
    15181 agagtcgcaa ccgggcatca aagacgcacg tcttttggcc tcggttttcc agacgctgcg
    15241 cgcatattaa ggaaaggaac aatgacaaca ttacttaacc cctattttgg tgagtttggc
    15301 ggcatgtacg tgccacaaat cctgatgcct gctctgcgcc agctggaaga agcttttgtc
    15361 agcgcgcaaa aagatcctga atttcaggct cagttcaacg acctgctgaa aaactatgcc
    15421 gggcgtccaa ccgcgctgac caaatgccag aacattacgg ctgggacgaa caccacgctg
    15481 tatctgaagc gcgaagattt gctgcacggc ggcgcgcata aaactaacca ggtgctcggt
    15541 caggctttac tggcgaagcg gatgggtaaa accgaaatca tcgccgaaac cggtgccggt
    15601 cagcatggcg tggcgtcggc ccttgccagc gccctgctcg gcctgaaatg ccgtatttat
    15661 atgggtgcca aagacgttga acgccagtcg cctaacgttt ttcgtatgcg cttaatgggt
    15721 gcggaagtga tcccggtaca tagcggttcc gcgacgctga aagatgcctg taacgaggcg
    15781 ctgcgcgact ggtccggcag ttatgaaacc gcgcactata tgctgggcac cgcagctggc
    15841 ccacatcctt atccgaccat tgtgtgtgag tttcagcgga tgattggcga agaaacgaaa
    15901 gcgcagattc tggaaagaga aggtcgcctg ccggatgccg ttatcgcctg tgttggcggc
    15961 ggttcgaatg ccatcggcat gtttgcagat ttcatcaacg aaaccaacgt cggcctgatt
    16021 ggtgtggagc cgggtggtca cggtatcgaa actggcgagc acggcgcacc gctaaaacat
    16081 ggtcgcgtgg gcatttattt cggtatgaaa gcgccgatga tgcaaaccga agacgggcag
    16141 attgaagaat cttactccat ctccgccgga ctggatttcc cgtctgtcgg cccacaacac
    16201 gcgtatctta acagcactgg acgcgctgat tacgtgtcta ttaccgatga tgaagccctt
    16261 gaagccttca aaacgctgtg cctgcacgaa gggattatcc cggcgctgga gtcttcccac
    16321 gccctggccc atgcgctgaa aatgatgcgc gaaaccccgg aaaaagagca gctactggtg
    16381 gttaaccttt ccggtcgcgg cgataaagac atcttcaccg ttcacgatat tttgaaagca
    16441 cgaggggaaa tctgatggaa cgctacgaat ctctgtttgc ccagttgaag gagcgcaaag
    16501 aaggcgcatt cgttcctttc gtcacgctca gggatccggg cattgagcag tcattgaaaa
    16561 ttatcgatac gctaattgaa gccggtgctg acgcgctgga gttaggtatc cccttctccg
    16621 acccactggc ggatggcccg accattcaaa acgccactct gcgcgccttt gcggcaggtg
    16681 tgactccggc acaatgtttt gaaatgctgg cactgattcg ccagaaacac ccgaccattc
    16741 ccattggcct gttgatgtat gccaatctgg tgtttaacaa aggcattgat gagttttatg
    16801 cccagtgcga gaaagtcggc gtcgattcgg tgctggttgc cgatgtgcca gttgaagagt
    16861 ccgcgccctt ccgccaggcc gcgttgcgcc ataatgtcgc acctatcttc atctgcccgc
    16921 caaatgccga tgacgacctg ctgcgccaga tagcctctta cggtcgtggt tacacctatt
    16981 tgctgtcacg agcgggcgtg accggcgcag aaaaccgcgc cgcgttaccc ctcaatcatc
    17041 tggttgcgaa gctgaaagag tacaacgctg cacctccatt gcaggggttt ggtatttccg
    17101 ccccggatca ggtaaaagca gcgattgatg caggagctgc gggcgcgatt tctggttcgg
    17161 ccattgttaa aatcatcgag caacatatta atgagccaga gaaaatgctg gcggcactga
    17221 aagtttttgt acaaccgatg aaagcggcga cgcgcagtta atcccacagc cgccagttcc
    17281 gttggcggca ttttaacttt ctttaatgaa gccggaaaaa tcctaaattc atttaatatt
    17341 tatcttttta ccgcttcgct tacccctgtc gaacgtcaac ttacgtcatt tttccgccca
    17401 acagtaatat aatcaaacaa attaatcccg caacataaca ccagtaaaat caataatttt
    17461 ctctaagtca cttattcctc aga
//
LOCUS       DADKRT010000087        17433 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.088, whole genome shotgun sequence.
ACCESSION   DADKRT010000087 DADKRT010000000
VERSION     DADKRT010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17433
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.088"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            162..605
                     /locus_tag="JQ356_002386"
     CDS             162..605
                     /locus_tag="JQ356_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004997737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4622455.1"
                     /translation="MDLALVTGQREGDLAAMRWEDIRDGRLYVEQQKTGAKIRISLPT
                     TISRLNLTLTDVLDNLKKINGKNEKLLGGKTARTIAAQFRIARDTSGLKWEGDPPPFH
                     EIRSLSGRLHSAEKGSDFTQALLGHRSSSMTDKYRDGRGREWKDI"
     gene            841..1659
                     /locus_tag="JQ356_002387"
     CDS             841..1659
                     /locus_tag="JQ356_002387"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HAY4622456.1"
                     /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG
                     RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHI
                     HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
                     THDDMPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV
                     VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
     gene            complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JQ356_002388"
     CDS             complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JQ356_002388"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HAY4622457.1"
                     /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
                     SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMA
                     KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
                     SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA
                     IKPGLWLYAQIKSVSITA"
     gene            complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JQ356_002389"
     CDS             complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JQ356_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HAY4622458.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
                     SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS
                     LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
                     LARISRERAGR"
     gene            complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JQ356_002390"
     CDS             complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JQ356_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4622459.1"
                     /translation="MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDI
                     ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQ
                     TLLGNSLVVVAPKASEQKDFIIDSTTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
                     GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVVSKGVKVVATFPEDSHKKV
                     EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
     gene            complement(4349..4498)
                     /locus_tag="JQ356_002391"
     CDS             complement(4349..4498)
                     /locus_tag="JQ356_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux pump-associated protein, AcrZ
                     family"
                     /protein_id="HAY4622460.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
                     PGQNH"
     gene            4627..5415
                     /gene="modE"
                     /locus_tag="JQ356_002392"
     CDS             4627..5415
                     /gene="modE"
                     /locus_tag="JQ356_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HAY4622461.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
                     LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
                     AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNANNQLPGIISHIERGAEQCE
                     VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
     gene            5483..6955
                     /gene="modF"
                     /locus_tag="JQ356_002393"
     CDS             5483..6955
                     /gene="modF"
                     /locus_tag="JQ356_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HAY4622462.1"
                     /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
                     LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT
                     AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKILLCQALMSEPDLLILD
                     EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA
                     KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL
                     NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK
                     RTADAPFHSLSWGQQHLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE
                     GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY"
     gene            7216..8232
                     /gene="galE"
                     /locus_tag="JQ356_002394"
     CDS             7216..8232
                     /gene="galE"
                     /locus_tag="JQ356_002394"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308814.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HAY4622463.1"
                     /translation="MRVLLTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN
                     GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGIGSSVLDVVNAF
                     SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYPD"
     gene            8242..9288
                     /gene="galT"
                     /locus_tag="JQ356_002395"
     CDS             8242..9288
                     /gene="galT"
                     /locus_tag="JQ356_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HAY4622464.1"
                     /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
                     LPAHDPDCFLCAGNVRVTGDKNHDYTGTYVFTNDFAALMSDTPDAPESNDPLMRCQSA
                     RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            9292..10440
                     /gene="galK"
                     /locus_tag="JQ356_002396"
     CDS             9292..10440
                     /gene="galK"
                     /locus_tag="JQ356_002396"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HAY4622465.1"
                     /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLNAPIVAHENYQWANYVRGVVKH
                     LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
                     EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG
                     GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC"
     gene            10434..11474
                     /gene="galM"
                     /locus_tag="JQ356_002397"
     CDS             10434..11474
                     /gene="galM"
                     /locus_tag="JQ356_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HAY4622466.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY
                     RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
                     SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
                     TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
                     YSSLTEYQFIAE"
     gene            11676..12428
                     /gene="gpmA"
                     /locus_tag="JQ356_002398"
     CDS             11676..12428
                     /gene="gpmA"
                     /locus_tag="JQ356_002398"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HAY4622467.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
                     DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JQ356_002399"
     CDS             complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JQ356_002399"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HAY4622468.1"
                     /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
                     KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT
                     DALLRQLANAVKARRG"
     gene            13954..14334
                     /locus_tag="JQ356_002400"
     CDS             13954..14334
                     /locus_tag="JQ356_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622469.1"
                     /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQ
                     VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD
                     INKKVQTGDGINNDVDTKTDGTTQ"
     gene            14448..15389
                     /gene="zitB"
                     /locus_tag="JQ356_002401"
     CDS             14448..15389
                     /gene="zitB"
                     /locus_tag="JQ356_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HAY4622470.1"
                     /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS
                     LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
                     ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
                     LGDLLGSVGAIIAALIIIWTGWTPADPILSIVVSLLVLRSAWRLLKDSVNELLEGAPV
                     SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHAHDALLDQIQHYL
                     MDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH"
     gene            complement(15386..16105)
                     /locus_tag="JQ356_002402"
     CDS             complement(15386..16105)
                     /locus_tag="JQ356_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HAY4622471.1"
                     /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
                     ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
                     WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
                     FWDSCMMVLSIVAMLLMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
                     LNGSRMWINSARERGSCALSH"
     gene            complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JQ356_002403"
     CDS             complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JQ356_002403"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HAY4622472.1"
                     /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM
                     VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK
                     TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV
                     ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY
                     PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD
                     KELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVP
                     LNRMLDFAATLRG"
BASE COUNT         4427 a         4537 c         4355 g         4114 t
ORIGIN      
        1 acatttttaa aacagctata gcttctggtc ttgccgaaga agatccagct tctgcaacca
       61 ggccattcag aactgaagtg aagcgcagtc gactgttaat tgacgagtat ctgttaatca
      121 ggaaaatagc agacgtccag aacgaatggt tcggcctttg catggatctt gcactggtaa
      181 caggacagcg cgaaggagat ctggcggcta tgagatggga ggatataaga gatggcagac
      241 tatacgtgga acaacaaaaa acaggggcaa aaattcgcat ttctctcccc accacgattt
      301 ccagattgaa tttaacactt accgatgtac tggataactt gaaaaaaata aacggtaaaa
      361 acgaaaagtt actcggaggg aagacagcca ggacaatcgc agcacagttc aggattgccc
      421 gagacacatc cggattgaaa tgggaaggtg acccaccgcc atttcatgaa atccgaagtt
      481 tatccggtcg cctgcactca gcagaaaaag gcagtgattt cactcaggcg ctccttggac
      541 atcgttcatc cagcatgacg gataaatacc gtgacggacg agggagggaa tggaaagaca
      601 tttagaatta atttcgaatg atttcgaaac accacttgta attaattgat tataaaggat
      661 taattcctaa gaggcatttg cttcatgaat gctcctttgc atttagcaac tgactgtaac
      721 agctaaaatt agtcgctttt ggcggtgaat gctgaattaa aacgcagaat tttgtccgat
      781 agtggtatcg gtgtaccatt cgcgcagacg aaaattctta accttaatct ggaatacgcc
      841 atgaccacac gcgtgattgc tctcgactta gacggcacct tattgacccc gaaaaagacc
      901 ctgcttcctt catcgataga agccctggcc cgcgctcgcg aagcaggcta tcaattaatc
      961 atcgtcacag gtcgccatca cgtcgctatt catccttttt atcaggcgct ggcgctggat
     1021 acacctgcta tttgctgtaa tggcacctat ttgtatgatt atcatgcaaa aaccgtgctg
     1081 gaagcggacc caatgcccgt taataaagcc ctgcaactca ttgagatgct gaatgaacac
     1141 cacattcacg gtctgatgta tgtggatgat gcaatggtct atgagcaccc gaccgggcat
     1201 gtcattcgca cgtctaactg ggcgcaaacc ctgccgccgg aacagcgtcc gactttcaca
     1261 caagtcgctt ctctggctga aacggcgcaa caagttaacg ccgtatggaa gttcgccctg
     1321 acgcacgatg acatgccgca attgcagcat tttggtaagc atgtcgaaca tgaactggga
     1381 ctggagtgtg aatggtcctg gcacgatcag gttgatattg cacgcggcgg caacagcaaa
     1441 ggtaaacgtt tgacgaaatg ggttgaggcg caaggctggt cgatggaaaa cgtcgtggcg
     1501 ttcggcgata actttaatga tatcagtatg ctggaggccg ctggtacagg cgtggcgatg
     1561 ggcaacgccg atgacgcggt aaaagcgcgc gccaacattg tgattggtga taacaccacc
     1621 gacagcattg cccagttcat ttatagccac ctgatttaat caggcggtta tcgacacact
     1681 tttaatttgc gcgtacagcc acaggcctgg tttgatcgcc agttcatccc tggcccacgg
     1741 gctgatacgc gcccacagcg ttttaccgcc gacttccagc tccacttcca cctgaccgtt
     1801 gtcgtcataa ctattaacaa cttttgcccg caatacgtta cgaatgctgg tttgctgcgg
     1861 cggttgtaaa accagagaaa catcggaagc ctgaatgcgg atacgtagcg cagcttgcag
     1921 cggttcgtcc agcttattga cccacaaatg ctgatcgccc agcgccagcg cggtcatcgc
     1981 gtaatgcgga tgatgctcaa gcaccgtcac tttcagaatg ctactttgtt gctctttcgg
     2041 cagccacgga ttcatcacgc tactacccca gacttcttcc agtgcgccaa aggctttcac
     2101 ctgaccgttt tccagtacca tcactctgtc tgccagatgg aggatctcat ccagcgaatg
     2161 gctgacatac aacatcggga tgttgatttc ccgcgtcaga cgttgcagat aaggcaacag
     2221 ttcgcgttta cgcggaatat ccagtgacgc cagcggttca tccagcaaca gcaattctgg
     2281 tgccgtcagc aaagcccgcc caatcgctac gcgctgtttt tcgcctccgg acaggctgcc
     2341 tggtaaacgg tcaagcaacg gttcaatgcc taaaagcgcc accagcttat cgaactgatc
     2401 gaccatgctt ttcgccatgc cgtagcgcag attgccacgc actttgtaat gcggaaacag
     2461 ccgcgcatcc tgaaaaacat agccaacgcg acgcttttct ggcgtcaggc agataccttt
     2521 ttcggcatca tttagtaccc gaccattgag gacaatcctc cctttttgcg ggcgcgtcag
     2581 tccactgatg gcgttaatca gcgaagtttt tccggcaccg gagacgccaa agatagcagt
     2641 gatgccattg gcgggcagcg tttcattaat agtcaggcaa tggttgccca acgtctggga
     2701 aaaattcagt tccagcatga ttagcgcccc gcccgttcac ggctgattct ggccagccat
     2761 tctgaaatca acagggagat catcgccagc gcaatagaaa taatgcacag tctcgccgcg
     2821 ccactttccc cgccgggggt ctggatcagg gtatacatgg cagagggaat ggttcgcgtt
     2881 tcgccaggaa tgttcgacac aaaggtgatg gttgcaccaa actcaccgag agaacgagca
     2941 aaagccagta ccgtaccaac aataattccc ggtaaggtca gcggtaacgt gatagtaaag
     3001 aaaacgcgcc agcgcccggc acctagtgtt cttgcggcct gttcgagttt gacatcaacc
     3061 ccttccagcg ccagacgaat tgcccgcacc atcagcggaa acgacatgac ggcggcagcg
     3121 agaaccgcgc cgcgccagct aaaggcgaag gtaataccaa accagtcata cagacgttca
     3181 ccgataaatc cgcgccgtcc catcgaaact aataataagt aaccgacgac cacgggcggt
     3241 aacaccagcg gtagatgcag tacgctgtcg agcagagctt tgcccggaaa cgtgcaacgc
     3301 accagtaacc aggcaaaaaa gatcccaaac ggcaggctaa acagcacagc cagggaagaa
     3361 actttcaggc ttaataaaac tgcctgccat tctggatcgg tcagtatcat tacttggttg
     3421 taaatccgta acgtttaaag atttccgctg cctgcggtcc cttcagataa tcataaaatg
     3481 ctttcactgt cgcattgtta tgcccttcca caacagcaac cggatattcc acttttttat
     3541 gtgaatcttc cgggaaggtg gcaaccactt ttaccccttt gctgacaact gcgtcagaac
     3601 cgtaaacaat gcccaacggc gcttcattgc gttcgaccaa cgccagcgcg ccacgaacat
     3661 cttccgccgg agccaatttc ggggagagcg tatcccatgc gcccagtttt tgcagtgctt
     3721 cttttgcata aatgccagca gggacatgtt ccggatcgcc aaccgcgagg cgaccgccat
     3781 tcagcagcga agtccagtta gttgtgctgt cgatgatgaa atctttctgc tcgctggctt
     3841 tcggtgctac aacgaccagg ctattgccga gcagtgtctg gcgcgaagcc gtatcgatcg
     3901 cttttttatc aaccgcataa tccatccatt tctgatcggc agagataaac agatccgcag
     3961 gcgctcccgc ttcaatctga cgggccagag tagatgacga agcgaaagaa gaaaccacat
     4021 ccacgccttt ttctttttta tactgcgtag caatgtcctg cattgcgtta gtcagtgatg
     4081 cggcggcgaa caccgtgatt ttcccttcat ctgccagtgt attgccagca acagcgaaag
     4141 agagtgccgc cccggcaaac aagttcaacc atttacgagc cattggtaac cccttaatgt
     4201 aacgttatat aggtgacaat ataacggcta actcagaatt ttcccagcag ttattgctaa
     4261 cctttgtgag gtagataaga aaaaatatcg gctggaaaag caggaagttg agaaaaagaa
     4321 atgcccgact aagtgggcat tcagggaatc aatgattttg tccgggctgg tcttttttac
     4381 caacaccaga aaagatgttg aatacttcac caagaccgta aatcagaccc aggatgatgg
     4441 ccatcacgac aggtaccatg attacggcga ataccagact ttttaataac tctaacatgg
     4501 tcaactccag atatagtcat gagactattc taaccgctaa gcacagaaaa gcactcccct
     4561 tttgtgcggt cagctttgcg tggcgttcgt tttccgtcac aataagactt ttgccaggac
     4621 attgttatgc aggccgaaat ccttctcacc cttaagctcc aacaaaaatt attcgccgac
     4681 ccgcgccgga tttcgctact aaaacacatt gcgctttccg gttccattag ccagggagcg
     4741 aaagatgccg gtatcagcta taaaagcgcc tgggatgcca ttaacgagat gaatcagtta
     4801 agcgagcata ttctggttga gcgcgcaaca ggcggtaaag gtggcggcgg cgcagtactg
     4861 acccgctatg gtcagcgact gattcagctc tatgacttac tggcgcaaat ccagcaaaaa
     4921 gcctttgatg tgttaagtga cgatgacgcc ctgccgctga acagcctgct ggccgcgatc
     4981 tcacgttttt cactgcaaac cagcgcccgt aaccagtggt tcggtaccat caccgcccgc
     5041 gatcatgatg acgttcaaca gcatgttgat gtcttactgg ctgacggaaa aacacgcctg
     5101 aaagtcgcaa ttaccgcaca aagcggcgca cgtctggggc tggatgaagg caaagaagtg
     5161 ttgatattgc taaaagcgcc gtgggtaggc attactcagg acgaagcggt cgcacaaaac
     5221 gccaacaacc aattaccggg tattattagt catattgagc gcggcgcaga gcagtgcgaa
     5281 gtattaatgg cgctacccga cgggcaaaca ctgtgcgcca cagtgccggt aaatgaagcg
     5341 acttctcttc agcaagggca gaatgtcacg gcctacttta atgccgacag cgtgattatc
     5401 gccacgctgt gctaagcgtg ttgacaattt gttatgaaac acgtatccct gtcagtaatc
     5461 gctgcacaaa atgggatata aaatgtcatc gttgcaaatt ttgcaaggca cgtttcgtct
     5521 tagcgacaca aaaacgctgc aattgcctca gctaacgtta aacgcgggtg atagttgggc
     5581 gtttgtcggt tcgaatggaa gcgggaaatc ggccctggcc cgcgcgctgg cgggggaact
     5641 tccgcttttg aaaggtgaac ggcaaagcca gttttcccac atcactcgtc tctccttcga
     5701 gcaattgcaa aaactcgtca gcgacgaatg gcagcggaat aacaccgata tgctcggccc
     5761 tggcgaagat gacaccggac gcactacggc tgagatcatt caggatgaag taaaggatgc
     5821 accgcgttgc atgcaactgg cgcagcagtt cggtattacc gccctcctcg accgacgctt
     5881 taaatacctt tccactggcg agacgcgaaa aatcctgctg tgtcaggcgc tgatgtcgga
     5941 gcctgacttg ttgattcttg atgagccgtt cgatggcctg gatgttgcct cacgtcagca
     6001 gctggctgag cgactcgcct cgttacatca gtccggtatt actctggtac tggtgctcaa
     6061 tcgcttcgat gagatcccgg agtttgtcca gtttgctggc gtgctggcgg attgcacgtt
     6121 agcggaaact ggcgctaaag aggaactgct ccaacaagca ctcgtcgcgc aactggcaca
     6181 tagtgaacag cttgaaggtg tgcaactgcc ggagccggat gaaccttcag cacgtcacgc
     6241 cttacccgcc aacgaaccgc gcattgtgct gaacaatggc gtggtttctt ataacgatcg
     6301 ccccattctt aataacctta gctggcaggt gaatccaggt gaacactggc aaattgtcgg
     6361 gccaaatggt gcaggaaaat cgacgttatt aagcctggtt actggcgatc atccgcaagg
     6421 ttacagcaac gatttgacgc ttttcggacg acgtcgcggc agcggcgaaa ccatctggga
     6481 tatcaaaaag catatcggtt acgtcagcag tagtttgcat ctggattacc gggtcagcac
     6541 taccgtgcgt aatgtgattc tttctggcta ttttgattcg attggcattt atcaggccgt
     6601 ttcggatcgc cagcaaaaac tggtgcagca gtggctggat attctcggca ttgataaacg
     6661 tacggctgac gctccgttcc atagtctttc ctggggacag cagcatctgg cgctgatcgt
     6721 ccgcgcactg gtgaaacatc cgacgttgct tattctcgat gaaccactac aggggcttga
     6781 tccgctcaat cgccagctta tccgccgttt tgttgatgtg ctgattagcg aaggtgaaac
     6841 gcaattgttg tttgtttcgc accacgctga agatgcgcct gcctgtatta cccatcgcct
     6901 tgagttcgtg ccggacggtg gactctatcg ctatgtgctg acaaaaatat attgagtcgg
     6961 tagtgctgac cttgccggag gcggcctaag cgccctctcc ggccaacggt tcgacgcatg
     7021 caggcatgaa accgcttctt ttttcagata aaaagcgcaa tcattcataa accctctgtt
     7081 ttataatcac ttaatcgcgc ataaaaaacg gctaaattct tgtgtaaacg attccactaa
     7141 tttattccat gtcacacttt tcgcatcttt gttatgctat ggttatttca taccataagc
     7201 ctaatggagc gaattatgag agttctgctt accggtggta gcggttacat tggaagtcat
     7261 acctgcgtgc aattactgca aaacggtcat gatgtcatca ttcttgataa cctctgtaac
     7321 agtaagcgca gcgtactgcc tgttatcgag cgtttaggcg gcaaacatcc aacgtttgtt
     7381 gaaggcgata ttcgtaacga agcgttgatg accgagatcc tgcacgatca cgctatcgac
     7441 accgtgatcc acttcgccgg gctgaaagcc gttggcgaat cggtacaaaa accgctggaa
     7501 tattacgaca acaatgtcaa cggtactctg cgcctgatta gcgccatgcg cgccgctaac
     7561 gtcaaaaact ttatttttag ctcctccgcc accgtttatg gcgatcagcc caaaattcca
     7621 tacgttgaaa gcttcccgac cggcacaccg caaagccctt acggcaaaag caagctgatg
     7681 gtggaacaga tcctcaccga tctgcaaaaa gcccagccgg actggagcat tgccctgctg
     7741 cgctacttca acccggttgg cgcgcatccg tcgggcgata tgggcgaaga tccgcaaggc
     7801 attccgaata acctgatgcc atacatcgcc caggttgctg taggccgtcg cgactcgctg
     7861 gcgatttttg gtaacgatta tccgaccgaa gatggtactg gcgtacgcga ttacatccac
     7921 gtaatggatc tggcggacgg tcacgtcgtg gcgatggaaa aactggcgaa caagccaggc
     7981 gtacacatct acaacctcgg cgctggcata ggcagcagcg tgctggacgt ggttaatgcc
     8041 ttcagcaaag cctgcggcaa accggttaac tatcattttg caccgcgtcg cgagggcgac
     8101 cttccggcct actgggcgga cgccagcaaa gccgaccgtg aactgaactg gcgcgtaacg
     8161 cgcacactcg atgaaatggc gcaggacacc tggcactggc agtcacgcca tccacaggga
     8221 tatcccgatt aaggaacgac catgacgcaa tttaatcccg ttgatcatcc acatcgccgc
     8281 tacaacccgc tcaccgggca atggattctg gtttcaccgc accgcgctaa gcgcccctgg
     8341 cagggggcgc aggaaacgcc agccaaacag gtgttacctg cgcacgatcc agattgcttc
     8401 ctctgcgcag gtaatgtgcg ggtgacaggc gataaaaacc acgattacac cgggacttac
     8461 gttttcacta atgactttgc ggccttgatg tctgacacgc cagatgcgcc agaaagcaac
     8521 gatcctttga tgcgttgcca gagcgcgcgc ggtaccagcc gggtgatctg cttttcaccg
     8581 gatcacagta aaacgttgcc agaactgagc gttgcggcat tgacggaaat cgtcaaaacc
     8641 tggcaggagc aaaccgcaga gctgggaaaa acgtacccgt gggtgcaggt ctttgaaaac
     8701 aaaggtgcgg cgatgggctg ctctaacccg catccgcacg gacagatttg ggcaaatagc
     8761 ttcctgccta acgaagctga gcgcgaagac cgcctgcaaa aagaatattt tgccgaacag
     8821 aaatcaccaa tgctggtgga ttatgttcag cgcgagctgg cagacggtag ccgtaccgtt
     8881 gtcgaaaccg aacactggtt agccgttgtg ccttactggg ctgcctggcc gttcgaaacg
     8941 ctactgctgc ccaaagccca cgttttgcgg atcaccgatt tgaccgacgc ccagcgcagc
     9001 gatttggcgc tggcgttgaa aaagctgacc agtcgttatg acaacctctt ccagtgctcc
     9061 ttcccctact ctatgggctg gcacggcgca ccatttaatg gcgaagagaa tcaacactgg
     9121 cagctgcacg cgcactttta tccgcctctg ctgcgctccg ccaccgtacg taaatttatg
     9181 gttggttatg aaatgctggc agagacccag cgagacctga ccgcagaaca ggcagcagag
     9241 cgtttgcgcg cagtcagcga tatccatttt cgcgaatccg gagtgtaaga aatgagtctg
     9301 aaagaaaaaa cacaatctct gtttgccaac gcatttggct accctgccac tcacaccatt
     9361 caggcgcctg gccgcgtgaa tttgattggt gaacacacgg actacaacga cggtttcgtt
     9421 ctgccctgcg cgattgatta tcaaaccgtg atcagctgtg caccacgcga tgaccgtaaa
     9481 gttcgcgtga tggcagccga ttatgaaaat cagctcgacg agttttccct caatgcgccc
     9541 attgtcgcgc atgaaaacta tcaatgggcg aactacgttc gtggcgtggt gaaacatctg
     9601 caactgcgta acaacagctt cggcggtgtg gacatggtga tcagcggcaa tgtgccgcag
     9661 ggtgccgggt taagttcttc cgcttcactg gaagtcgcgg tcggaaccgt attgcagcag
     9721 ctttatcatc tgccgctgga cggcgcacaa atcgcgctta acggtcagga agcagaaaac
     9781 cagtttgttg gctgtaactg cgggatcatg gatcagctaa tttccgcact cggcaagaaa
     9841 gatcatgcct tgctgattga ctgtcgttca ctggggacca aagcagtttc catgccgaaa
     9901 ggtgtggctg tcgtcatcat caacagtaac ttcaaacgta ccctggttgg cagcgaatac
     9961 aacacccgtc gtgaacagtg cgaaaccggt gcgcgtttct tccagcagcc agccctgcgc
    10021 gatgtcacca ttgaagagtt caacgctgtt gcacatgagc tggacccaat cgtggcgaaa
    10081 cgcgtgcggc atatcctgac tgaaaacgcc cgcaccgttg aagctgccag cgcgctggag
    10141 cagggcgacc tgaaacgtat gggcgagttg atggcggagt ctcatgcctc tatgcgcgat
    10201 gatttcgaaa tcaccgtgcc gcaaattgac actctggtag aaatcgtcaa agctgtgatt
    10261 ggcgacaaag gtggcgtacg catgaccggc ggcggatttg gcggctgtat cgtcgcgttg
    10321 atcccggaag agctggtgcc tgccgtacag caagctgtcg ctgaacaata tgaagcaaaa
    10381 acaggtatta aagagacttt ttacgtttgt aaaccatcac aaggagcagg acagtgctga
    10441 acgaaactcc cgcactggca cccgatggtc agccgtaccg actgttaact ttgcgtaaca
    10501 acgcagggat ggtagtcacg ctgatggact ggggtgcgac tttactttca gcccgtattc
    10561 cgctttccga tggcagcgtc cgcgaggcgc tgctcggctg tgccagcccg gaatgctatc
    10621 aggatcaggc cgcgtttctg ggggcctcta ttggtcgtta tgccaaccgc atcgccaata
    10681 gccgttatac ctttgacggt gaaaccgtga ccctttcgcc aagtcagggc gttaaccagc
    10741 tgcacggcgg cccggaaggg ttcgacaaac gtcgctggca gattgtgaac cagaacgatc
    10801 gtcaggtgct gtttgccctg agttcagatg atggcgatca gggcttcccg ggtaatctcg
    10861 gcgcaacggt gcaatatcgt ctgaccgacg ataaccgtat ctccattact tatcgcgcca
    10921 cagttgataa accttgcccg gtgaatatga ctaatcacgt ctatttcaat cttgacggcg
    10981 agcagtctga cgtgcgcaat cacaagttgc agattctggc ggacgaatat ctgccggttg
    11041 atgaaggcgg cattccgcac gacggcctga aatctgtcgc cggaacgtct tttgatttcc
    11101 gcagcgccaa aatcatcgcc agtgagtttc ttgccgacga cgatcagcgc aaagtgaaag
    11161 gttacgatca cgcattcttg ttacaggcca aaggcgatgg caagaaagtg gcggcgcatg
    11221 tctggtcagc agatgaaaaa ttgcagctga aggtctacac caccgctccg gctctgcaat
    11281 tctactccgg caacttcctc ggcggcacac cgtcgcgggg aacagaacct tacgccgact
    11341 ggcaagggct ggcgttggaa agcgagtttc tgccggacag cccgaaccac cctgaatggc
    11401 cgcaaccgga ctgcttcctg cgtcctggcg aagagtattc cagcctgacg gaatatcagt
    11461 ttattgctga gtaatgttaa gccctcgtca tgagggcttt atctcatatt gctcaaatca
    11521 ccagcaaaca ccgacatatt tgcaactcaa tattcacaac aaccttacac tgcgccacta
    11581 ttttcgctat ggttatgcgt aagcattgct gttgcttcgt cgcggcaata taatgagaat
    11641 tattatcatt aaaagatgat ttgaggagta agtatatggc tgtaactaag ctggttctgg
    11701 ttcgtcatgg cgaaagtcag tggaacaaag aaaaccgttt caccggttgg tacgacgtgg
    11761 atctgtctga gaaaggcgta agcgaagcaa aagcagcagg taagctgctg aaagaggaag
    11821 gttacagctt tgactttgct tacacttctg tgctgaaacg cgctatccat accctgtgga
    11881 atgtgctgga cgaactggat caggcatggc tgcccgttga gaaatcctgg aaactgaacg
    11941 aacgtcacta cggtgcgttg cagggtctga acaaagcgga aactgctgaa aagtatggcg
    12001 acgagcaggt gaaacagtgg cgtcgtggtt ttgcagtgac tccgccggaa ctgactaaag
    12061 atgatgagcg ttatccgggt cacgatccgc gttacgcgaa actgagcgag aaagaactgc
    12121 cgctgacgga aagcctggcg ctgaccattg accgcgtgat cccttactgg aatgaaacta
    12181 ttctaccgcg tatgaagagc ggtgagcgcg taatcatcgc cgcacacggt aactccctgc
    12241 gtgcgctggt gaaatatctt gataacatga gcgaagaaga gattcttgag ctgaatatcc
    12301 cgactggcgt gccgctggtg tatgagttcg acgagaattt caaaccgctg aaacgctatt
    12361 atctgggtaa tgctgacgag atcgcagcga aagcagcggc ggttgcaaac cagggtaaag
    12421 cgaagtaaac gtcattcgtt taaaatgaga aagccgactg caagtgagtc ggcttttttg
    12481 ttgctaacaa tggagcacat tgcctgatgc gacgcttcgc gacttatcag gcctgtggtg
    12541 attcatcgga tacgccactc tgacggcgca tccgacaatt aaaccttacc cgcgacgcgc
    12601 ttttactgca ttcgccagtt gacgtaacag agcatcggta tcttcccagc cgatgcaggc
    12661 atcggtgatg ctcttaccgt aggccagcgg ctccccgctc tcgaggctct gattgccttc
    12721 caccagatgg ctttccacca tcacgccaat aatggccttt tcgccaccgg caatctgctg
    12781 gcaaacgtca gcacaaacat ccatctgctt tttgaattgt ttggacgagt tagcatggct
    12841 gaaatcgatc atcacctgtg ctggcaggcc tgctttgttc agcccttctt tcacttcagc
    12901 aacgtgcttc gcgctgtagt taggctcttt accgccgcgc agaatgatat ggcaatcgcc
    12961 gttaccgctg gtattcacaa tcgccgaatg cccccatttc gttacggaca ggaagcagtg
    13021 cggcgcaccg gcggcattaa tggcatcgat agccacttta atcgtaccgt cggtgccatt
    13081 tttgaagccg actggacaag aaagccctga tgccagttcg cggtgcacct gcgattcggt
    13141 ggtacgtgcg ccaattgcgc cccagctcat caggtcagcg agatattgtg gggtgatcat
    13201 atcgagaaac tcacccgccg ctggcagacc gctgtcgtta atatcaagca gcaatttacg
    13261 ggctatacga agaccgtcgt tgatctggaa gctgttatcc atatgcggat cgttaatcag
    13321 ccctttccag cccaccgtgg tacgcggctt ttcaaaatag acgcgcatta cgatttccag
    13381 ctcatctttc agctcttcac gcagcgccag caagcgagtg gcatactctt tagccgcgac
    13441 aggatcatga attgagcacg ggccaatcac caccaacagg cgatcatcat tacctttcag
    13501 gatcttatgg atcgcttttc gggcatgggc aaccgtattc gcggcatttt cagtagcggg
    13561 gaatttttcc agcaatgcga caggaggaag taactctttg atttctttga tgcgtaaatc
    13621 gtcgttctga taattcatgt ctgttccagt gttgccatac ttatcttagt gaatgcaata
    13681 cttccaatct atatcttccg tcagaatgtg taaacggggt tttacattat gaacggatta
    13741 atcctggaat tagcaagaaa aacgccagat tgtcgcgaaa aacgagatct ctcctacaat
    13801 ttctaactgt aactcctttg tttgttaatt atttcaagat tctctgctgc gtttcataaa
    13861 ctggctgaaa tcttaaacca atgccttata ttcacctgca aatgcactgt tggaagaggt
    13921 tatccgacat aacgaccata acaggagcat cctatgaaaa tgacaaaact ggccacatta
    13981 tttctgactg ccactctaag ccttgccagc ggtgccgcac tggctgccga tagcggagcg
    14041 caaactaata acggccaggc aaacgccgca actgatgcgg gccaggtagc ccctgacgcc
    14101 cgtgaaaatg tcgcgccaaa taacgtcgac aataacgggg taaataccgg ttctggcggc
    14161 acaatgctgc attcggatgg ttcttcaatg aacaatgacg gaatgaccaa agatgaagag
    14221 cacaagaaca ccatgtgcaa agatggtcga tgtccggata tcaataaaaa ggtacaaacc
    14281 ggtgatggca tcaataatga tgtcgatacc aaaaccgacg gtaccacgca gtaaccctgc
    14341 aaaatagcca ataatgggag agcggagtct ctccctttta atttttcact tctaaaagca
    14401 gtatgatgtc ataaagttaa gtgagaataa ttaagggatg actcgtcatg gcgcactcac
    14461 actcacacac gtcctcacac ctgccagaag ataataatgc tcgtcgcttg ttgtatgctt
    14521 tcggcgtgac tgccgggttt atgctggtag aagtcgttgg tggttttctt tctggttctc
    14581 tggcattgct ggccgatgcg ggtcatatgt tgaccgatac tgccgccctg cttttcgccc
    14641 tactcgccgt gcaattttca cgtcgtcctc ccaccattcg ccacactttc ggttggctaa
    14701 gactgaccac gctcgcggcg tttgtgaatg ccatcgccct cgtggtaatt accattttga
    14761 ttgtctggga ggcgatagaa cgcttccgca cgccgcgtcc ggtcgagggc ggcatgatga
    14821 tggcaattgc cgtggctggg ttgctggcaa atatactttc tttctggtta cttcatcacg
    14881 gcagcgaaga gaaaaacctc aacgtacgag cagcggcatt gcatgtgctc ggggacctgt
    14941 tgggttcggt tggggctatt attgccgcgt tgattattat ctggaccggc tggacacctg
    15001 ctgaccccat tctctcgata gtggtgtcgc ttctggttct gcgtagcgcg tggcgactgt
    15061 tgaaagatag cgtgaatgaa ttacttgaag gtgcaccggt atcgctggat atcgctgaac
    15121 tgaagcgtcg tatgtgccgg gaaatcccgg aagtccgcaa tgtgcaccat gtacatgtat
    15181 ggatggtagg tgagaagccg gtgatgacgc tgcatgtgca ggtgatcccg ccacacgctc
    15241 acgatgcctt gttggatcag atccaacact acctgatgga tcactatcag attgagcacg
    15301 ccaccattca gatggaatat caaccttgtc atgggccaga ctgccacctg aatgaagggg
    15361 tgtctggcca ttcacatcat caccattaat gggacagcgc gcatgagcct ctttcacgtg
    15421 cgctgttgat ccacatccga ctgccgttga gcgcaataaa ggtcaggatg atgtactcca
    15481 gagacatggc gtaaacgccc tgaagtgcaa aaataacgac gctaatcacg ttaataatca
    15541 cccacaacag ccagttttcc acatacttac gcgtcatcag aagcattgcc acgatagata
    15601 acaccatcat gcatgaatcc cagaacggga aagcgtccgg ttgcagttca ggcatcacaa
    15661 cctgtaatcc taatgcttgc atgatcatga ctgccacgcg ggtcaaaaat gcaaacaccg
    15721 gattgataaa taccgtcatc agaccaatcg aaacaacgca aaccgccaac cagctgagcg
    15781 ccttcggcaa tggtaaccag cgaattttca actccgcctc gttctgactg gtttgtcgcg
    15841 accacgcata ccaaccgtaa atattcgcgg caaagaaaaa cacctgtaat agcaggctgg
    15901 catacagctg aatctgaaag aaaataatgc caaacaaggt gacgttgatc aggccaaaga
    15961 agtagttgct gatcttctcc agactggcaa ggccaataca cagcaacccg gcgatcgtgc
    16021 ctaccgcttc gatccatgag agatcataac cgcctgctcc tattggtata tgtaccagga
    16081 tattctgcac actaaaaaaa tccatctttc ccccaaagcg taacgttacg ccttattatt
    16141 cgttatccac gtagtgtagc cgcaaaatcc agcatacgat tgagcggcac cagcgccctc
    16201 tctcgcagcc tttcatcaac atgaacctcg tgattgcttc cttcctgttc taatgcctct
    16261 gcgatggcct gaaggccatt catggccatc cacggacaat gcgcgcagct gcggcaggtt
    16321 gcaccctcac ctgcggttgg tgcttccagt aactctttat ctggcaccgc ctgctgcatt
    16381 ttgtagaaaa taccccgatc ggttgccaca ataagcctct gatgtggcaa tgttttcgca
    16441 gcagcgatca gttgactggt ggaaccgacc gcatccgcca tatcgacaat agcttgtggt
    16501 gattctggat gcaccagtat ggcagcatcc gggtattctt cttgcaagcg ggttaacgcc
    16561 tgagtcttaa attcatcatg cacaatacag gcaccctgcc agcatagaat gtctccaccc
    16621 gtctgttttt gcacgtaacg ccccagatgt ttgtcgggtg cccagatgat tttttcaccc
    16681 aaactatcaa gatgatcaat aagttcgacg gcaatgcttg aagttaccac ccaatctgcg
    16741 cgcgctttta ccgcagcaga agtgttggcg tagacgacga cagtacgatc gggatgggca
    16801 tcgcaaaatg cgttaaattc ttcaacaggg cagccgagat ccagtgaaca ttcagcctga
    16861 agtgtcggca tcagaattgt tttttccgga ctgagaattt tggcggtttc tcccataaat
    16921 ctcaccccag cgactaacaa agtagaagcg ggatgctttg caccgaagcg cgccatttcc
    16981 agagaatcag aaatacagcc accggtttct tctgccagtt gttgaatttc gggatcggta
    17041 tagtagtggg caaccatcac cgcattacgt tcttttagca gacgttttat cttctcgcgg
    17101 taatacgctt tttcatcaat gcttaacggc gtcggcttcg gggggaaagg ataaatcgcc
    17161 gtgtctggat caaacattac gctcatctta ccatctcgtt ttacaggctt aacgttaaaa
    17221 ccgacattag cgtaatattc gctgttatcg gtgtaatttg ttttatatgc taaacaagat
    17281 agtcgaatgg tggggaaaag tcactcgaat tacgcctaat tccaccgacg tagagttgct
    17341 tgcacagtaa gctctgacga tgtcatcagg tttacaaagt gaaattgagg atgcctgaat
    17401 agcaaaaaag cgcctttagg gcgctttttt aca
//
LOCUS       DADKRT010000088        17385 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.089, whole genome shotgun sequence.
ACCESSION   DADKRT010000088 DADKRT010000000
VERSION     DADKRT010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17385
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.089"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            42..118
                     /locus_tag="JQ356_002404"
     tRNA            42..118
                     /locus_tag="JQ356_002404"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:76..78,aa:Pro,seq:tgg)
     gene            265..1500
                     /locus_tag="JQ356_002405"
     CDS             265..1500
                     /locus_tag="JQ356_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HAY4622473.1"
                     /translation="MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTH
                     MDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLDFYRRAVKLQAKYGAGRKISN
                     SFQTNGVLLDDKWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL
                     QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLH
                     APGDIQGELTEWSVRPDEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVC
                     HHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQ
                     LPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLL
                     AHGRPASDIMQAHLLVVNK"
     gene            complement(2424..3620)
                     /gene="hemY"
                     /locus_tag="JQ356_002406"
     CDS             complement(2424..3620)
                     /gene="hemY"
                     /locus_tag="JQ356_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HAY4622474.1"
                     /translation="MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHV
                     GDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTL
                     GQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTL
                     QNNPPQ"
     gene            complement(3623..4840)
                     /gene="hemX"
                     /locus_tag="JQ356_002407"
     CDS             complement(3623..4840)
                     /gene="hemX"
                     /locus_tag="JQ356_002407"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY4622475.1"
                     /translation="MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAI
                     AIALAAGVGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLK
                     QANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRL
                     ADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQD
                     IYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQL
                     SQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPAPAPAPAPAPA
                     PQGDTPAAAPQGE"
     gene            complement(4862..5602)
                     /gene="hemD"
                     /locus_tag="JQ356_002408"
     CDS             complement(4862..5602)
                     /gene="hemD"
                     /locus_tag="JQ356_002408"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HAY4622476.1"
                     /translation="MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLA
                     DQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQK
                     ILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQR
                     CAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERL
                     AKLARELGWQDIKVADNADNDALLRALQ"
     gene            complement(5599..6540)
                     /gene="hemC"
                     /locus_tag="JQ356_002409"
     CDS             complement(5599..6540)
                     /gene="hemC"
                     /locus_tag="JQ356_002409"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HAY4622477.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE
                     DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD
                     NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAA
                     LNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER
                     RGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA"
     gene            6927..9473
                     /gene="cyaA"
                     /locus_tag="JQ356_002410"
     CDS             6927..9473
                     /gene="cyaA"
                     /locus_tag="JQ356_002410"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HAY4622478.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTL
                     YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVC
                     EKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLY
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLCGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEG
                     IIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS"
     gene            complement(9513..9833)
                     /gene="cyaY"
                     /locus_tag="JQ356_002411"
     CDS             complement(9513..9833)
                     /gene="cyaY"
                     /locus_tag="JQ356_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HAY4622479.1"
                     /translation="MNDSEFHRLADQLWLTIEEHLDDWDGDSDIDCEINGGVLTITFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGET
                     VSFR"
     gene            10296..10490
                     /locus_tag="JQ356_002412"
     CDS             10296..10490
                     /locus_tag="JQ356_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004987677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY4622480.1"
                     /translation="MKNVFKVLTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVET
                     QTQSTVPDKNDRATGMVHPR"
     gene            10535..11359
                     /gene="dapF"
                     /locus_tag="JQ356_002413"
     CDS             10535..11359
                     /gene="dapF"
                     /locus_tag="JQ356_002413"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HAY4622481.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQ
                     LLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG
                     SGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL"
     gene            11356..12063
                     /locus_tag="JQ356_002414"
     CDS             11356..12063
                     /locus_tag="JQ356_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HAY4622482.1"
                     /translation="MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVP
                     HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSL
                     DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
                     HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLH
                     EIALMLPELLERWIERV"
     gene            12060..12956
                     /gene="xerC"
                     /locus_tag="JQ356_002415"
     CDS             12060..12956
                     /gene="xerC"
                     /locus_tag="JQ356_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HAY4622483.1"
                     /translation="MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENG
                     LQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVS
                     APKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
                     DLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR
                     NVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYT
                     HLDFQHLASVYDAAHPRAKRGK"
     gene            12956..13672
                     /gene="yigB"
                     /locus_tag="JQ356_002416"
     CDS             12956..13672
                     /gene="yigB"
                     /locus_tag="JQ356_002416"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HAY4622484.1"
                     /translation="MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHP
                     ALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAM
                     INFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHG
                     RSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTW
                     DSRLLPHLEISRLASLTSLI"
     gene            13756..15918
                     /gene="uvrD"
                     /locus_tag="JQ356_002417"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             13756..15918
                     /gene="uvrD"
                     /locus_tag="JQ356_002417"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HAY4622485.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIA
                     WLMSVENCLPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAET
                     IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTMHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG
                     EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV"
     gene            complement(15963..16865)
                     /locus_tag="JQ356_002418"
     CDS             complement(15963..16865)
                     /locus_tag="JQ356_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HAY4622486.1"
                     /translation="MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGV
                     AFGVDHNLKIFDLTHEIPPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVV
                     LKTKSGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTG
                     ARLASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDEL
                     LNQAEIKLNDTLCVTISEGSQQKYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNM
                     DNFAQKHQVASGADWNIDVKKCAK"
     gene            complement(16948..17379)
                     /locus_tag="JQ356_002419"
     CDS             complement(16948..17379)
                     /locus_tag="JQ356_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622487.1"
                     /translation="MALNLASGEGNFFIRPGGVFYVAGDKVGIIRLDAFKTSKEIQFA
                     VQSGPMLLENGVINPRIHPNVASRKIRNGVGINKQGNAVFLLSQQATNFYDFACYAKA
                     KLNVEQLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG"
BASE COUNT         3986 a         4484 c         4661 g         4254 t
ORIGIN      
        1 gactttaaat aattgaacta aaaattcaaa aagcagtatt tcggcgagta gcgcagcttg
       61 gtagcgcaac tggtttggga ccagtgggtc ggaggttcga atcctctctc gccgaccaat
      121 tttgaacccc gcttcggcgg ggttttttgt tttctgtgca tttcgtcacc ctctcttcgc
      181 aataaacgcc cgtaataact cattgcccca cggtatgatt tcgcccttaa cgtattgaag
      241 gatgacttca ggcaaggagt gaccatgctg caacaggttc caacgcgtgc ttttcatgtg
      301 atggcgaaac cgagtggttc cgattgtaat ctgaactgtg actactgttt ttatctcgaa
      361 aaacaatccc tttaccgcga aaagccagtc acgcatatgg acgatgacac gctggaagcg
      421 tatgtccgtc actatatcgc tgccagcgaa ccgcaaaacg aagtggcttt tacctggcag
      481 ggcggcgaac caacgttact cgggctggat ttttaccgcc gtgccgtaaa gttacaggcg
      541 aaatacggtg ctggcaggaa gataagtaac agcttccaga ctaacggcgt gctgctcgat
      601 gataaatggt gtgcatttct ggcagaaaat cattttcttg ttgggttatc gctggacggt
      661 ccggctgaga tccacaatca atatcgcgtg accaaaggtg gcagaccaac gcataagctg
      721 gtgatgcgtg ccctgacgct gctgcaaaaa catcatgtcg actataacgt gctggtctgc
      781 gtcaaccgca ccagcgcgca gcaaccgttg caggtttatg attttttgtg cgatgcggga
      841 gtcgaattca tccagtttat tccggtggtc gagcgcctag ctgatgaaac agctgccagc
      901 gatggactga aactacatgc gcctggtgat attcaggggg aactgacgga atggtctgtg
      961 cgccccgatg aatttggtga atttctggtg gcgatttttg accactggat caaacgcgac
     1021 gtcggcaaga ttttcgtgat gaatatcgaa tgggcgtttg ccaattttgt cggtgcgccg
     1081 ggtgcggttt gccatcatca gccaacctgt gggcgctcgg tgattgttga gcacaacggc
     1141 gacgtttacg cctgcgatca ctatgtttat ccgcaatatc ggctggggaa tatgcatcag
     1201 caaacaattg cagaaatgat cgattccccg caacagcagg tgtttggtga agataaattt
     1261 aagcaattac cggcgcagtg tcgcagttgt aacgtgttaa aagcgtgctg gggaggctgc
     1321 ccgaaacacc gcttcatgct cgatgccagc ggcaaaccgg ggctgaatta tttgtgtgcc
     1381 gggtatcagc gttatttccg ccatctaccg ccatatctta aagcaatggc tgatttgctg
     1441 gcgcacggtc gcccggccag tgacattatg caggcacatt tgctggtggt gaataagtaa
     1501 aatagcggcc attttgtggc cgcctgcggt tgattgccgg atgcggcgta aacgccttat
     1561 ccggcctaca tgatcgtgca aattcaataa attgcagcgt tctgtggata ctggtttggg
     1621 tgatcgtatc cggcaaagcc tttgcgtgcg gtggcagttg acggggtatc tgctgcgctg
     1681 gccatgagag gaagagcggc ggcgacagca acaacaagaa gtttgggtga aaacgaaaat
     1741 tccatgcaaa atgctccggt ttcatgtcat caaaatgatg acgtaattaa gcattgataa
     1801 ttgagatccc tctccctgac aggatgatta cataaataat agtgacaaaa ataaattatt
     1861 tatttatcca gaaaatgaat tggaaaatca ggagagcgtt ttcaatccta cctctggcgc
     1921 agttgatatg taaggcaggt ttattatatc gcgttgatta ttgatgcttt ttttagtttt
     1981 aacggcaatt aatatatgtg ttattaattg aatgaatttt atcattcata ataagtatgt
     2041 gtaggatcaa gctcaggtta aatattcact caggaagtta ttactcagga agcaaagagg
     2101 attacagaat tatctcataa caagtgttaa gggatgttat ttcccgattc tctgtggcat
     2161 aataaacgag tagatgctca ttccatctct tatgttcgcc ttagtgcctc ataaactccg
     2221 gaatgacgca gagccgttta cggtgcttat cgtccactga cagatgtcgc ttatgcctca
     2281 tcagacacca tggacacaac gttgagtgaa gcacccactt gttgtcatac agacctgttt
     2341 taacgcctgc tccgtaataa gagcaggcgt ttttttatgc atcagaaagg tcccggaggt
     2401 gcttgcctcc gggtgagaag gaactactgt ggtgggttgt tctgcaacgt taacatcaaa
     2461 ccgtcgcgac gcatcgctgc agcttcttcc ggcttgtgca gtctgtccag cgcgtcggca
     2521 agccatgcgt aatcgtaggc gtccggacgt tgtttcagcg ctgcgcggaa ggcgagcgat
     2581 gcttcctgcc attctccgtg cttcatcagt gactggccca gtgtgctcca caacagcggg
     2641 cgatcgccga cgtttttgat ctgctggcgc agcacttttt ccagctgttc cggattgttg
     2701 gttttcagtc gaggaatcgg cagcagtagg cgatcgtcgt actggcgttt caggccatcg
     2761 atgataattt gctgggcagt atcatgatcg tcacattcaa taagatgttc cgccattgcc
     2821 acctgcaacg ctacttgatg acgcgttttc cggctttggt ttttccacca gttacgcaaa
     2881 ccttcactac cgttatcggc acgcgcctga tccatcaggc caatccatgc ctgttgttcc
     2941 agcattgcac gatgttcttc atcaccaaca tgggctttcg ccattgatgg gatgatatcc
     3001 agcagagaac tccatgcacc tgtgcggata tacgcctgtt ccgccagacg taatacttcc
     3061 ggatggcgtg gcgtaacttc cagcagctta tccacgccgt ggcgtgcagc atggttttca
     3121 ttacgggcca gttgcagacg tacacgggtg atttctaccg gaatggtgtc attgccggcc
     3181 agctccgctg cgcgttccag atgttggttg gcgcgcgctt catcaccacg ttgttgcgcg
     3241 gcttcggcag ccagtagata gttcaccacc ggttgttcag cgtgatcggc atttttcgcc
     3301 atcagctttt caacttgctg ataatcgcct tccgccagtt tcagcagcgc ctgttcggtc
     3361 tgcttacgtg cacggcgacg cttacgcccg acaaaccacc cacgggtgtg cgcgccagtg
     3421 cggaagatcc gccgcagtag ccactcaatg gcaaacagca ctaccatcgc cagaatcaat
     3481 atgatcgcca ggcccgtgac gctggtttcg atattgtagt tgtcggtctg gatcagcaca
     3541 taaccctgat gaccggcaat catcgggcca accactatcc ccgcaatcag caaaacaaag
     3601 agtaataaca cttttagcat ggttattctc cttgcggcgc ggctgccgga gtatcacctt
     3661 gcggtgcagg tgcaggtgca ggtgcaggtg caggtgcagg tgcaggtgca ggtttagctt
     3721 ccgttgtccc tgctgccggt tgtgccagca ggttacgcac gcgagtctgc atcagttttt
     3781 ccagcatcgc ctggctttgc agggtttccg gaagatccat cgagatattt tgctggctta
     3841 actggtccac ctcgtcgagg aacgctttgg tggtggcatc atcagtatcg tagtaagcac
     3901 gtacccaggt ggagacgttc tccagcgcct ggcgataagt ctcttcctgg tgacgcggta
     3961 cagcttgtgc tgcgaccagc aggcgagagc gaatattttc gcgcagatag atatcctgat
     4021 ttggcgctaa cagcggtacg gcggtgtcat cacgacggcg aatcgtaatg aagttgtcca
     4081 taaagttctg ccagcttttt tgcagattga tacgccattc gctgatggaa ctggaaagct
     4141 cttcaccatc ggaatccatc ggcgaaccat cgctgtcatt atcggccaga cgcaggttat
     4201 ctacctgatt tgaaagctga ttaagcttaa ggatgatgcc gtcataatcc acctgcgaaa
     4261 ctgcagaaag gctggcgata tcatcggtaa ttgcccgacg aacggtaatc agactcgggt
     4321 cattcatatc cgccaggctg gcatctgcac ttttcagcaa cgctgcagcg gtcgtgacgt
     4381 cctgatcgct ccacagcttc cgtccggcga gtttcaccag aaaatcggcc tgagccagca
     4441 gccaggtttt agcatcgctg ccggaaatgg tggcgacctt ttgttggact tcatccaact
     4501 gttttgccag cgtttcttgc tgacgattcg cctgcttaag ctgtgcagct tgttgcttaa
     4561 taatgccttc cagctcggct ttttggctct cctgggcttt ttgcaatgcc gtcagttggt
     4621 tagccagggc atcgctggtg gcggtctgat tgacggcctg ttgtttaccc cagccataca
     4681 aaccgacgcc cgccgccaga gcaatagcga tagccaccgc gctgagaatc aatgcggtat
     4741 tgttcttact ctttttttct gttgcgacag gttgtgacgt ggtgtccacg gcctccctgg
     4801 tctcttcaac cacggcggag gttttttctt gttccgtcat tatggcttcc tgttatgaga
     4861 gttattgtaa tgcccgtaaa agcgcatcgt tgtcagcgtt atcggcgacc ttaatgtctt
     4921 gccagcccag ttcccgggcg agtttcgcca aacgctcact gacgaccaat agtcgacagc
     4981 gtagtaacca gtgctcacga taccattgtg ggatcagcga ccagagttgc tgcaacattt
     5041 caccgctggt aacaacgacc atcgtcacct cgcgggattg ccagcgcatc gcttcttctg
     5101 caccatcgta atggattgcg catcgttgat aacattcaca aaaagtgacc tcagcaccgc
     5161 gcgctgtcag ggtatcccca attagctcac gaccgccatt gccacgtaat atcagcgcac
     5221 gtttgcccgc aatattttgt aattcaggta attgtagcaa gacttcgctg atttcccgat
     5281 cctgcgggta gagaatcttc tgtccgctta cggtatgtag cgccagtgcg gtggtgcgtc
     5341 caatggcgaa ataatcaggt agtcggggcc atttacgatc ttgctgatgc agctgtgatt
     5401 gggcaaaagc aaccgcgtgt tgcgagaggg caaacaacag atcgctctcc cccagcgccg
     5461 ccagttgatc agcaagttgc ggtaattgtc gacccggaga aaactcaatc agcggaaaat
     5521 gccaggccac ctgccccagt gtgcgcagac ggctcactaa ctcttctcca gcgggagacg
     5581 ggcgggtgac caggatactc atgccggggc gtctccgtta tagacttcag cgaggatctc
     5641 gcgcgcgccg ttattcagta gctcttctgc cagcgaaatc cccatttgtt cggcatcttg
     5701 cggcgcaccg cggcgttcac cgcgaataat ctgcgaaccg tccggcgcgc cgaccagcgc
     5761 acgcagccag atttcaccat caataagctc ggcgtagcta ccaattggca cctgacatcc
     5821 gccttcgaga cgggtattca tggcgcgttc tgcggtaacg cgcagtgcag tttcgtggtg
     5881 attcagcgcg gcaagcagct cgcgagtgcg tgcatcatca aggcggcatt caataccgac
     5941 cgcaccttgt cctaccgctg gaagagaaat ctcgggtggt aacgcggcgc gaatgcggga
     6001 ctccagacct aaacgtttta gtccggctac ggcaagaatg atggcatcgt attcgccgtt
     6061 atctagtttg ctcaggcgag tgccgacgtt gccgcgcagg gagcggataa tcagatccgg
     6121 gcggcgttca gccagttggc actggcgacg taaactggac gtcccgacga tactgcctgc
     6181 tggtaacgca tccagactgt catagttatt ggacacaaag gcatcgcgag gatcttcacg
     6241 ctcacaaata gtgaccagtc ccagaccttg cgggaattca accggcacat ctttcattga
     6301 atgtacggcg atatcggcgc gattttcgag gagcgcgact tccagctctt ttacaaataa
     6361 gccttttccg cctactttcg ccagcggcgt atcaagaatc acatcgccgc gcgtcaccat
     6421 cggtaccagt tcaacgacca ggcccggatg gctcgccatc aacttgtctt tgacatagtg
     6481 tgcctgccag agtgcaagtg ggctttggcg tgtggcaatt cttaaaacat tgtctaacat
     6541 gcttgttacc gtcattatca tccgtggtcc atcctaacat ccttgccaga gtgatgtcag
     6601 tgttgtggtg aaacgtagac gcctgcgcaa accgtaaaat gaggtctggc agtggatcct
     6661 gacaggcgtt tcacgccgtc gtaataagga atttacagag aataaacggt gctacacttg
     6721 tatgtagcgc atctttcttt acggtcaatc agcaaggtgt taaattgatc acgttttaga
     6781 ccattttttc gtcgtgaaac taaaaaaacc aggcgcgaaa agtggtaacg gttacctttg
     6841 acatacgaaa tatcccgaat gccgcgtgtt accgttgatg ttggcggaat cacagtcatg
     6901 acgggtagca aatcaggcga tacgtcttgt acctctatat tgagactctg aaacagagac
     6961 tggatgccat aaatcaattg cgtgtggatc gcgcgcttgc tgctatgggg cctgcattcc
     7021 aacaggtcta cagtctactg ccgacattgt tgcactatca ccatccgcta atgccgggtt
     7081 accttgatgg taacgttccc aaaggcattt gcctttacac gcctgatgaa actcaacgcc
     7141 actacctgaa cgagcttgaa ctgtatcgtg gaatgtcagt acaggatcca ccgaaaggtg
     7201 agcttccaat tactggtgta tacaccatgg gcagcacctc gtccgtaggg caaagttgtt
     7261 cctctgacct ggatatctgg gtctgtcatc aatcctggct cgatagcgaa gagcgccagt
     7321 tactacaacg taaatgtagt ctgctggaaa gctgggccgc ctcgctgggt gtggaagtca
     7381 gcttcttcct gattgatgaa aaccgcttcc gtcataatga aagcggcagc ttggggggcg
     7441 aagattgtgg ctccacccag catatactgc tgcttgacga attttatcgt accgccgtgc
     7501 gtctcgccgg taagcgtatt ctgtggaata tggtgccgtg cgacgaagaa gagcattacg
     7561 acgactatgt gatgacgctt tacgcgcagg gcgtgctgac gccaaatgaa tggctggatc
     7621 tcggtggctt aagctcgctt tctgctgaag agtactttgg tgccagcctt tggcagctct
     7681 acaagagtat cgattcccca tacaaagcgg tactgaaaac actgctgctg gaagcctatt
     7741 cctgggaata cccgaaccca cgtctgctgg cgaaagatat caaacagcgt ttgcacgacg
     7801 gtgagattgt atcgtttggt ctcgatccat actgcatgat gctggagcgt gttactgaat
     7861 acctgacggc gattgaagat tttacccgtc tggatttagt acgtcgctgc ttctatttaa
     7921 aagtgtgcga aaagctcagc cgtgaacgcg cctgcgtagg ctggcgtcgc gcagtgttga
     7981 gccagttagt gagcgagtgg ggttgggacg aagctcgtct ggcaatgctc gataaccgcg
     8041 ctaactggaa gattgatcag gtgcgtgagg cgcacaacga gttgctcgac gcgatgatgc
     8101 agagctaccg taatctgatc cgctttgcgc gtcgcaataa ccttagcgtc tccgccagtc
     8161 cgcaggatat cggcgtgctg acccgtaagc tgtatgccgc gtttgaagca ttaccaggta
     8221 aagtgacgct ggtaaacccg cagatttcac ccgatctctc ggaaccgaat ctgaccttta
     8281 tttatgtgcc gccgggccgt gctaaccgtt caggttggta tctgtataac cgcgcgccaa
     8341 atattgagtc gatcatcagc catcagccgc tggaatataa ccgttacctg aacaaactgg
     8401 tggcgtgggc atggtttaac ggcctgctga cctcgcgcac ccgtttgtat attaaaggta
     8461 acggcattgt cgatttgcct aagttgcagg agatggtcgc cgacgtgtcg caccatttcc
     8521 cgctgcgctt acctgcaccg acaccgaagg cgctctacag cccgtgtgag atccgccatc
     8581 tggcgattat cgttaacctg gaatatgacc cgacagcggc gttccgcaat caggtggtgc
     8641 attttgattt ccgtaagctg gatgtcttca gctttggcga gaatcaaaat tgcctggtag
     8701 gtagcgttga cctgctgtac cgcaactcgt ggaacgaagt gcgtacgctg cacttcaacg
     8761 gcgagcaatc gatgatcgaa gccctgaaaa ctattctcgg caaaatgcat caggacgccg
     8821 caccgccaga tagcgtggaa gtcttctgtt atagccagca tctgtgcggg ttaatccgta
     8881 ctcgcgtgca gcaactggtt tctgagtgta ttgaactgcg cctttccagc acccgccagg
     8941 aaaccgggcg tttcaaggcg ctgcgcgttt ctggtcaaac ctggggcttg ttcttcgaac
     9001 gcctgaatgt atcggtacag aagctggaga acgccatcga gttttatggc gctatttcgc
     9061 ataacaaact gcacggcctg tcagtgcagg ttgaaaccaa tcacgtcaaa ttaccggcgg
     9121 tggtggacgg ctttgctagt gaagggatca tccagttctt cttcgaagaa acgcaagacg
     9181 agaatggctt taatatctac attcttgacg aaagcaaccg ggttgaggtg tatcaccact
     9241 gcgaaggcag caaagaggaa ctggtgcgtg acgtcagtcg cttctactcg tcatcgcacg
     9301 accgcttcac ctacggctca agcttcatca acttcaacct gccgcagttc tatcagattg
     9361 tgaaggttga tggtcgtgaa caggtgattc cgttccgcac aaaatctatc ggtaacatgc
     9421 cgcctgccaa tcaggatcac gatacgccgc tattacagca atatttttcg tgatgaacgt
     9481 gccggaaagc gaggcttatc cggcatgcaa tcttagcgga aactgactgt ttcacccgcc
     9541 tgctgcgtcg ccgcctgttc cagcaaatcc cagaaggttt cgccgctgcg atcgcaaatc
     9601 cactcatcgc ctttcagatc aaaatggtag ccgccttgtt tggttgccag ccatacctgg
     9661 tgcagcggtt cctggcggtt gataatgatt ttgctgccgt tttcaaaggt aatggtcagc
     9721 acgccgccgt tgatttcgca gtcgatatcg ctgtcgccat cccagtcgtc cagatgctct
     9781 tcaatggtca gccacagttg atcagccagg cgatgaaatt cactgtcgtt cattgttgta
     9841 tcctgttttt aagtgatggc ggcagtatag cggcatgggg tcagggcttc aaagtttgca
     9901 cctctgctgc tgcgttccgg catgattcat ccgtcaccgg aataatgatg tctctgtgtg
     9961 gcgaaagatt tgtctcttca ttagggcgca gttacaccac gcctttccct gtttctggta
    10021 aacattatga tcaggtttac cgagcgagca tcctcacgct gacggaacta aaaaagccaa
    10081 caaacaaacc acattgcgat agtgcataaa gccatcctgg cgcgaggtgc cgatcacgaa
    10141 actgccagca gaacataaat cctcacgagt aagcgttata ctcgcagcat ttcctcactt
    10201 ttcagacttc ataaagagtc gctaaacgct tgcttttacg ccttctcctg cgatgataga
    10261 aagcagaaag cgatgaactt tacaggcaat ccataatgaa aaacgtgttt aaggtactca
    10321 ctgtattact tactctcttc agcctgacgg gctgcggtct gaaaggtccg ctctatttcc
    10381 cgcctgcaga taaaaatgca ccgccgccga ccaaaccggt agagacgcaa acgcaatcca
    10441 cggtgccgga taaaaacgat cgcgccactg ggatggtcca tcccaggtga attactaaaa
    10501 gtcagtttct gtacccgcgt gattggagta aatgatgcag ttctcgaaaa tgcatggcct
    10561 tggcaacgat tttatggtcg tcgacgcggt aacgcagaat gtcttttttt caccggagct
    10621 gattcgtcgg ctggcggatc ggcacctggg ggtagggttt gaccagctgc tggtggttga
    10681 gccgccgtat gatcctgaac tggattttca ctatcgcatt ttcaatgctg atggcagtga
    10741 agtggcgcag tgcggcaacg gtgcgcgctg ctttgcccgt tttgtgcgcc tgaaagggct
    10801 gaccaataag cgcgatatcc gcgtcagcac cgccaacggg cggatggttc tgaccgtcac
    10861 cgatgatgat ctggtccgcg taaatatggg cgaacccaac ttcgaacctt ccgctgtgcc
    10921 gtttcgcgct aacaaagcgg aaaagaccta tattatgcgc gccgccgagc agacaatctt
    10981 atgcggcgtg gtgtcgatgg gaaatccgca ttgcgtgatt caggtcgatg atgtcgatac
    11041 cgcggcggta gaaacgcttg gtcctgttct ggaaagccac gagcgttttc cggagcgcgc
    11101 caatatcggt tttatgcaag tggttaagcg cgagcatatt cgtttacgcg tttatgagcg
    11161 tggggcagga gaaacccagg cctgcggcag cggcgcgtgt gcggcggttg cagtagggat
    11221 tcagcaaggt ttgctggccg aagaagtacg cgtggaactc cccggcggtc gtcttgatat
    11281 cgcctggaaa ggtccgggtc acccgttata tatgactggc ccggcggtac atgtctacga
    11341 cggatttatt catctatgaa gcaaccaggg gaagaactgc aggaaacact cacggagctt
    11401 gatgaccggg cggttgtcga ttatctgatt aaaaatcctg agttttttat ccgtaatgcg
    11461 cgcgcagtag aagcgatacg tgtgccacat ccggtacgcg gcaccgtttc gttggtcgag
    11521 tggcacatgg cccgcgcacg taatcatatt catgttctgg aagagaacat ggcgctgttg
    11581 atggaacagg ctatcgccaa cgaaggcctg ttttatcgcc tactctacct gcagcgcagt
    11641 ctcaccgccg ccagcagtct cgacgatatg ctgatgcgct ttcaccgctg ggcgcgcgat
    11701 ctcggcctgg caggtgcgag tctgcgcctg tttccggatc gctggcgctt aggtgcgccg
    11761 tcgaaccaca ctcatctggc attaagccgt cagtctttcg aaccgctgcg tattcagcgt
    11821 ttggggcagg aacagcacta tcttgggccg cttaacggac cagagctgct ggtggtgcta
    11881 ccggaagcga aagcggtggg atcggtggcg atgtcgatgc tgggaagcga tgctgatttg
    11941 ggtgtcgtgc tgtttaccag tcgcgatgcc agtcactatc aacaagggca aggaacgcag
    12001 ttacttcatg aaattgcgct gatgttgccg gagcttctgg agcgttggat tgaacgcgta
    12061 tgaccgattt acacaccgat gtagaacgct acctacgtta tctgagcgtg gagcgccagc
    12121 ttagcccgat aaccctgctt aactaccagc gtcagcttga ggcgatcatc aattttgcca
    12181 gcgaaaacgg cctgcaaagc tggcagcaat gtgatgtgac gatggtgcgc aattttgctg
    12241 tacgcagtcg ccgtaaaggg ctgggagcag caagtctggc gttacggctt tctgcgctac
    12301 gtagcttttt tgactggctg gtcagccaga acgaactcaa agctaacccg gcgaaaggtg
    12361 tttcggcacc gaaagcgccg cgtcatctgc cgaaaaatat cgacgtcgac gatatgaatc
    12421 ggctgctgga tattgatatc aacgatcccc tcgctgtacg cgaccgtgca atgctggaag
    12481 tgatgtacgg cgctggtctg cgtctttccg agctggtggg gctggatatc aaacacctcg
    12541 acctggagtc tggtgaagtg tgggtaatgg ggaaaggcag caaagagcgc cgcctgccga
    12601 ttggtcgcaa cgctgtggcg tggattgagc actggcttga tttgcgcgac ctgtttggta
    12661 gcgaagacga cgcgcttttt ctgtcgaaac tgggcaagcg tatctccgcg cgtaatgtgc
    12721 agaaacgctt tgccgaatgg ggcataaaac aagggctgaa taatcacgtt cacccacata
    12781 aattacgtca ctcgttcgct acgcatatgc tggagtcgag cggcgatctt cgtggtgtgc
    12841 aggagctact gggtcatgcc aacctctcca ccacgcaaat ctatactcat cttgattttc
    12901 aacaccttgc ctcggtgtac gatgcggcgc atccacgcgc caaacggggg aaataatgcg
    12961 tttttaccgg cctttggggc gcatctcggc gctcaccttt gacctggatg atacccttta
    13021 cgataaccgt ccggtgattt tgcgcaccga gcgagaggcg cttacctttg tgcaaaatta
    13081 tcatccggcg ctgcgcagct tccagaatga agatctgcaa cgcctgcgcc aggcggtacg
    13141 ggaagcggaa cccgagattt atcacgacgt gacgcgctgg cgttttcgtt cgattgaaca
    13201 agcgatgctc gacgccgggc tgagtgccga agaagccagt gcaggcgcac acgcagcaat
    13261 gatcaacttt gccaaatggc gcagccgaat cgacgtcccg cagcaaactc acgacacctt
    13321 aaaacagctg gcgaagaaat ggccgctggt ggcgatcacc aacggtaacg cccagccgga
    13381 actgtttggt ttgggggatt attttgagtt tgtgctgcgc gctggcccgc acgggcgctc
    13441 aaaaccgttc agcgatatgt actttctggc tgcggaaaaa ctcaacgtgc cgatcggcga
    13501 gatcttacat gttggggacg atctcaccac tgacgtgggt ggggcaattc gcagcggaat
    13561 gcaggcctgt tggatcagac cggaaaatgg cgatctgatg caaacctggg acagccgttt
    13621 actgccgcat ctggaaattt cccggttggc atctctgacc tcgctgatat aatcagcaaa
    13681 tctgtatata tacccagctt tttggcggag ggcgttgcgc ttctccgccc aacctatttt
    13741 tacgcggcgg tgccaatgga cgtttcttac ctgctcgaca gccttaatga caaacagcgc
    13801 gaagcggtgg ccgcgccacg cagcaacctt ctggtgctgg cgggcgcggg cagtggtaag
    13861 acgcgcgtac tggtgcatcg tatcgcctgg ctgatgagcg tggaaaactg cttgccatac
    13921 tcgattatgg cggtgacgtt taccaacaaa gcggcggcgg agatgcgtca tcgtatcggg
    13981 cagctaatgg gcaccagcca gggcggcatg tgggtcggca ccttccacgg gctggcgcac
    14041 cgtctgctgc gtgcgcacca tatggacgcc aatctgccgc aggattttca gatcctcgac
    14101 agcgaggacc agctacgcct gctcaaacgc ctaatcaagg cgatgaacct cgacgagaag
    14161 cagtggccgc cgcgccaggc aatgtggtac atcaacagcc agaaagatga aggcctgcgt
    14221 ccacatcata ttcaaagcta cggtaatccg gtggagcaga cctggcagaa ggtgtatcag
    14281 gcgtatcagg aagcgtgtga ccgcgcgggc ctggtggact tcgccgagct gctgctgcgc
    14341 gctcacgagt tgtggcttaa caagccgcat atcctgcaac actaccgcga acgttttacc
    14401 aatatcctgg tggacgaatt ccaggatacc aacaacattc agtacgcgtg gatccgcctg
    14461 ctggcgggcg acaccggcaa agtgatgatc gtcggtgatg acgaccagtc aatctacggc
    14521 tggcgcgggg cgcaggtgga gaatattcag cgtttcctta atgatttccc cggtgccgaa
    14581 actattcgtc tggagcaaaa ctaccgctct accagcaata ttctgagcgc cgctaacgcc
    14641 ctgattgaaa acaataacgg gcgtctgggt aaaaaactgt ggaccgatgg cgcggatggt
    14701 gagcctattt ccctctattg cgcttttaac gaactcgatg aagcgcgttt tgtggttaac
    14761 cgcatcaaaa cctggcagga caacggcggg gcgcttgccg agtgcgccat tctctaccgc
    14821 agtaacgccc agtcgcgtgt gctggaagaa gcactgttgc aggcgagtat gccgtaccgt
    14881 atttacggcg ggatgcgctt cttcgaacgc caggaaatca aagatgcgct ctcgtatctg
    14941 cgcctgattg ccaaccgtaa cgacgacgcg gcctttgagc gtgtggtgaa tacgccaacg
    15001 cggggtattg gtgaccggac gctggacgtg gtacgtcaga catcgcgcga tcgccagtta
    15061 acactctggc aggcatgtcg tgaactgttg caggaaaaag ccctcgccgg acgtgctgcc
    15121 agcgccttac agcggtttat ggaactgatc gacgccttag cgcaggaaac tgccgatatg
    15181 ccgctgcatg tacagactga ccgggtaatt aaagactccg gcctgcgtac catgtacgag
    15241 caggagaagg gcgaaaaagg tcagacgcgt atcgaaaact tagaggaact ggtgacggca
    15301 acgcgccagt tcagctacaa cgaagaagac gaagatttaa tgccgctgca ggcgttccta
    15361 tcccatgcgg cgctggaagc aggcgaaggg caggcggata cctggcagga tgcggtacaa
    15421 ctgatgacca tgcactcggc gaaaggtctg gagttcccgc aggtgtttat cgtcggtatg
    15481 gaagagggca tgttcccaag ccagatgtcg ctggatgaag gcgggcgtct ggaagaagaa
    15541 cgccgtctgg cctacgttgg cgtaacccgc gcgatgcaga aactgacgct gacctacgcg
    15601 gaaactcgcc gtctgtatgg caaagaggtt taccatcgcc cgtcgcgctt tattggcgag
    15661 ctgccggaag agtgtgtgga agaggtgcgc ctgcgcgcca cggtaagccg cccggtcagc
    15721 catcagcgga tgggtacgcc gatggtcgag aacgacagcg gctacaagct cggccagcgt
    15781 gtacgccacg ctaagtttgg tgaaggcacc atcgtcaata tggaaggcag cggtgaacat
    15841 agccgtttgc aggtggcatt ccagggccag ggtattaaat ggctggtggc ggcttatgcc
    15901 cggttggaga cggtgtgacg ttgcgggatg cggtgcgcca caccgcattc cgcatcagca
    15961 ccttacttag cgcacttctt cacatcaata ttccagtcag caccagacgc aacctgatgt
    16021 ttctgcgcga aattatccat attcagcgcc acggaaacat tcaataagct gttcagatac
    16081 accatcggct ggccttccgg cacatcgccg aagcttgcga catacggcat tttccctgcg
    16141 tatttttgct gggaaccttc ggaaatggtc acacacaacg tgtcgttgag tttgatttct
    16201 gcctgattca gcaactcgtc gctgatattg ctccagacgt tgccgtactg aatatcgaga
    16261 atcgggatat tgcccttcac ttcacctttt gttgcttttg ctttctgata agaaagttcg
    16321 acaacttttg ctggaagctc tggccccacc tgttcgaacg taatcgcccc ggaagccaga
    16381 cgtgcaccgg tgtaggcata cacgtcacga ccgtggaagg tatatgactt ttcagaacct
    16441 ttcaggcggt tagctttttc gtcgatttcc cggacgctat caatacccag agtttgtgcc
    16501 accaaagtga gcgtaccgtt atctggtgaa acgaagtatt gaccgctttt ggttttcagc
    16561 actaccgatt tacggtcagt gcctacgccc ggatcgacca cgctaacaaa caccgaacct
    16621 tgcggccagt aactggcagt ctgatacagg cgataagcgc cttcccagat gttatacggt
    16681 ggaatttcgt gtgttaaatc aaagatttta agattatggt caacgccgaa tgcgacccct
    16741 ttcatcgccg agacggcacc atctttcagg ctaaaatcag tttgtaaaat caaagcgtta
    16801 tccgcatagg cggatgatga tcccagacac gttaataaaa ataacgttgc gagcgttttt
    16861 ttcatttttg tttcccttca tttatctgat gattttccag ctgtgtagcc agtcccagtt
    16921 tgtctggcct cctcgagtgt acaatgctta acctttccgc tcgacggaaa tcatggtgac
    16981 aaaaggatag cgttgccacg ggattgcccc gcctttcata tacatatgtg aaattgtgcc
    17041 atcaagataa agcaactgct caacgttcag tttcgctttg gcataacagg caaaatcata
    17101 aaaatttgtc gcctgctggc tcaacaaaaa cacggcgttc ccttgtttat taatccctac
    17161 accgttacga attttacgcg aggcaacatt cgggtgaatg cgtggattaa ttacgccgtt
    17221 ttctaataac attggccctg actgcaccgc aaactgaatc tctttactgg ttttaaaggc
    17281 atccagacga atgatgccga ctttatctcc cgcaacataa aacacgccgc caggacggat
    17341 aaagaaattc ccttcacctg aagcgagatt taacgccacc ttctg
//
LOCUS       DADKRT010000089        17105 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.090, whole genome shotgun sequence.
ACCESSION   DADKRT010000089 DADKRT010000000
VERSION     DADKRT010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17105
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.090"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..304)
                     /gene="hlyE"
                     /locus_tag="JQ356_002420"
     CDS             complement(<1..304)
                     /gene="hlyE"
                     /locus_tag="JQ356_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin HlyE"
                     /protein_id="HAY4622488.1"
                     /translation="MTEIVADKMVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETI
                     KELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLF"
     gene            677..1096
                     /gene="umuD"
                     /locus_tag="JQ356_002421"
     CDS             677..1096
                     /gene="umuD"
                     /locus_tag="JQ356_002421"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HAY4622489.1"
                     /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
                     IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
                     PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
     gene            1096..2363
                     /locus_tag="JQ356_002422"
                     /pseudo
     CDS             1096..2363
                     /locus_tag="JQ356_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415702.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
     gene            complement(2409..2939)
                     /gene="dsbB"
                     /locus_tag="JQ356_002423"
     CDS             complement(2409..2939)
                     /gene="dsbB"
                     /locus_tag="JQ356_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HAY4622490.1"
                     /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
                     IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
                     TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV
                     MISQPFKAKKRDLFGR"
     gene            complement(3085..4626)
                     /gene="nhaB"
                     /locus_tag="JQ356_002424"
     CDS             complement(3085..4626)
                     /gene="nhaB"
                     /locus_tag="JQ356_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HAY4622491.1"
                     /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
                     REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
                     YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
                     WIATL"
     gene            4848..5567
                     /gene="fadR"
                     /locus_tag="JQ356_002425"
     CDS             4848..5567
                     /gene="fadR"
                     /locus_tag="JQ356_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HAY4622492.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            complement(5619..7151)
                     /locus_tag="JQ356_002426"
     CDS             complement(5619..7151)
                     /locus_tag="JQ356_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HAY4622493.1"
                     /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLLRSWTDASSIVDYLIFARKYITEC
                     EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR
                     GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMG
                     NL"
     gene            7481..8779
                     /locus_tag="JQ356_002427"
     CDS             7481..8779
                     /locus_tag="JQ356_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HAY4622494.1"
                     /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
                     ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA
                     GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF
                     RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS
                     LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
                     VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
                     LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
     gene            8847..9848
                     /gene="dadX"
                     /locus_tag="JQ356_002428"
     CDS             8847..9848
                     /gene="dadX"
                     /locus_tag="JQ356_002428"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
                     /protein_id="HAY4622495.1"
                     /translation="MSARPRRTRVVKANAYGHGIERIWSALGATDGFALLNLEEAITL
                     RERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVN
                     SGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARIEQAAEGL
                     ECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIG
                     VQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTV
                     SMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV"
     gene            complement(10235..11971)
                     /locus_tag="JQ356_002429"
     CDS             complement(10235..11971)
                     /locus_tag="JQ356_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HAY4622496.1"
                     /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIAL
                     PAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV
                     VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN
                     QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA
                     DVALIYGLEDGREYRDKQQTLGEIVQQLLGTAPVVGDQVEFAGMIWTVAEKEDNEVLK
                     IGVRVAEEEAES"
     gene            complement(12066..12980)
                     /gene="ldcA"
                     /locus_tag="JQ356_002430"
     CDS             complement(12066..12980)
                     /gene="ldcA"
                     /locus_tag="JQ356_002430"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HAY4622497.1"
                     /translation="MSLFHLIAPSGYSIKQHAALRGIQRLTDAGHQVNNVEVIARRCE
                     RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI
                     CGHSDFTAIQCGLLAQGNVITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQ
                     GEGPTCQTEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH
                     AGILPRQKAIILGSFSGSTPNDYDAGYNLESVSAFLRSRLSIPLITGLDFGHEQRTVT
                     LPLGAHAILNNTREGTQLTISGHPVLKM"
     gene            13080..13691
                     /gene="emtA"
                     /locus_tag="JQ356_002431"
     CDS             13080..13691
                     /gene="emtA"
                     /locus_tag="JQ356_002431"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309714.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HAY4622498.1"
                     /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ
                     KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP
                     TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
                     RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM"
     gene            complement(13693..14427)
                     /locus_tag="JQ356_002432"
     CDS             complement(13693..14427)
                     /locus_tag="JQ356_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HAY4622499.1"
                     /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
                     AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
                     VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
                     AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP
                     TVERQLQRIIFSLEREAREKADKVRD"
     gene            14628..14882
                     /locus_tag="JQ356_002433"
     CDS             14628..14882
                     /locus_tag="JQ356_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY4622500.1"
                     /translation="MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFQTCILGIVGAVVGG
                     WLATMFGIGGSISGFNLHSFLVAVVGAILVLGLFRLLRRE"
     gene            15061..15501
                     /locus_tag="JQ356_002434"
     CDS             15061..15501
                     /locus_tag="JQ356_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622501.1"
                     /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN
                     TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY
                     RQRRCKSPGDDSETLTRRNDAIFGNHVWQTFAQYFPPGLEKPAV"
     gene            complement(15580..16925)
                     /gene="treA"
                     /locus_tag="JQ356_002435"
                     /pseudo
     CDS             complement(15580..16925)
                     /gene="treA"
                     /locus_tag="JQ356_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_304434.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreA"
BASE COUNT         4310 a         4225 c         4423 g         4147 t
ORIGIN      
        1 caaatagcaa aatatacgct gcgagcaatt gcgtcgcaac accacaccat tcatacactg
       61 tttgggttgc ttcaaaatac ttatcctggc tatccataag taaggtttta atatcgccga
      121 ctaaaacgga ggctgcctgt gaatactcct gtttaaagcg acttaactct tttatggttt
      181 catcaaaggt ctgccagggg atgacctgat cgagatattt attataaaga tctaatgctc
      241 catctgcggt ttcgattgcg tttttaacta cttctaccat tttatctgca acgatttcag
      301 tcataatcat tcgcctcttt aaatatataa attgtaatga aactcctgtt ttacaactat
      361 taataaattt tacttcatct aattcatagt tagccgggtg ggatgcgtca atgtctttat
      421 ttctattaat atgataaata tcaaacaatg tttaatgtca ttatggcgaa tgcttctatt
      481 ctattttttt gccgggtgat atttttcatt tctgctggat gagcgtcgtc gccagaaggc
      541 cacgtgagca caggataaga gaacgaaaaa tcagcagtct atacagcgac aaatattgat
      601 agcctgaatc agtattgatc tgctggcaag aatagactac tgtatataaa aacagtataa
      661 cttcaggcag attattatgt tgtttatcaa gcctgcggat ctccgcgaaa ttgtgacttt
      721 tccgctattt agcgatcttg ttcagtgtgg ctttccttca ccggcagcag attacgtcga
      781 acagcgcatc gatctgaatc aactgttgat ccagcatccc agcgcgactt acttcgtcaa
      841 agcaagtggt gattctatga ttgatggtgg aattagtgac ggtgatttac tgattgtcga
      901 tagcgctatt accgccagcc atggtgatat tgtcatcgct gctgttgacg gcgagtttac
      961 ggtgaaaaaa ttgcaactac gcccgacggt acagcttatt cccatgaaca gtgcgtactc
     1021 gcccattacc atcagtagcg aagatacgct ggatgtcttt ggtgtggtga tccacgtcgt
     1081 taaggcgatg cgctgatgtt tgctctctgt gatgtaaacg cgttttatgc cagctgtgag
     1141 acggtgtttc gccctgattt atggggtaaa ccggtggttg tactatcgaa taatgacggt
     1201 tgcgttatcg cccgaaacgc tgaggcaaag gcgctgggtg ttaaaatggg cgatccctgg
     1261 ttcaaacaaa aagatctgtt tcgtcgctgt ggtgtggttt gctttagcag caattatgag
     1321 ctttacgcag acatgagcaa tcgggtgatg tcgacgctgg aagaactatc gccccgcgtc
     1381 gagatttaca gtattgatga ggcattctgc gatctgacag gtgtgcgtaa ttgtcgcgat
     1441 ctgactgatt ttggcagaga aattcgcgca acggtgctac aacgtaccca tcttactgtt
     1501 ggtgtgggga tcgcccagac caaaacgctg gctaagcttg ccaatcatgc ggcaaaaaaa
     1561 tggcagcggc agacgggggg gtggtggatt tatcaaatct ggaacgccag cgtaaattaa
     1621 tgtctgctct ccccgtggat gacgtctggg ggattggacg gcggatcagc aaaaaactgg
     1681 acgcgatggg gatcaaaacc gttcttgatt tggcggatac agatatccgg tttatccgta
     1741 aacattttaa tgtcgtgctc gaaagaacgg tgcgtgaact gcgcggtgaa ccctgtttgc
     1801 aactggaaga atttgcaccg acaaagcagg aaattatctg ttcccgctcg tttggtgaac
     1861 gtatcacgga ttatacgtcg atgcggcagg ccatttgtag ttacgctgcc cgggcggcgg
     1921 aaaaacttcg cagtgagcat caatattgtc ggtttatctc cacatttatt aagacgtcac
     1981 catttgcgct caatgaacct tattacggca atagcgcgtc ggtaaaactg ctgacgccca
     2041 ctcaggacag cagggatatc attaacgccg ctacgcgatc tctggatgcc atctggcaag
     2101 cgggccatcg ctaccaaaaa gcgggcgtga tgctggggga tttcttcagt cagggagtcg
     2161 cgcagctcaa tttattcgat gacaacgcac cgcgccccgg gagtgagcaa ttgatgacgg
     2221 taatggatac actgaatgct aaagagggca gaggaacact ctattttgcc gggcagggga
     2281 tccaacaaca atggcagatg aagcgagcca tgctttcacc acgttataca acgcgaagtt
     2341 ctgatttact gcgggtcaaa taaatatagc ggcaggaaaa aagtgctccc gcaggagcgc
     2401 cgaatggatt agcgaccgaa cagatcacgt tttttcgctt taaacggctg ggaaatcatc
     2461 accagcaccg cgacaatcag gtaagcgata aaaataccga gcagccactg cggcatttcc
     2521 agacctaaaa aatcccactg acgctcggcg caatcgccag aggcgacaaa cacttgcggc
     2581 acccatttat ccagcggcag ccattccggg aaacgaacca taaaatcaca ggtggcaaac
     2641 ggcgaaggat agagctgaag catggtgtgc tcgtaagtta actgcacacc gcggaacgca
     2701 ctatacaacc agataaccat cgctacataa cgcagcggag ttttcggggc gatcgcgcca
     2761 atcagcgcag cacccagaac gccgaataac gcgcagcgtt cataaataca gagcacgcaa
     2821 ggtttcagta acatcacatg ctggaaccac agcgccgtca gttccagtgc cagagcagta
     2881 aacgccatca acagccacgc gccccggcct tgtgaacatt ggttcaaaaa tcgcaacata
     2941 atcatttccc tgcaatatgc atagagtgcg cagtttaaac caattcattc gctgcgccac
     3001 caggaggcag caaaaatagg acgcaattgg acaattatcg ggcgaaaagg caaaccgggc
     3061 atttatatgc ccggtaagtt gttatcaaag cgttgctatc cagcccattt gcataaacca
     3121 ttcggttaca ggggcaagcg taaactcgac gcagagcagc ccgacgagtg tcaggacgag
     3181 ggtgtaaggc agggccatcc acaccatgcg gccataagag aggcgaatca atggcgcgag
     3241 tgcagaggtc agcaggaaca ggaacgcagc ctgaccgttc ggcgtagcga cagagggcag
     3301 attggtaccg gtattaatgg cgaccgccag cagctcgtat tgcttcaacg tgatagcgcc
     3361 actttccatt gccgctttcg cttcgttgat ataaatcgtc cccacgaaga cgttatccga
     3421 aatggatgac agcagaccgt tgaaaatata gaacaacgac agctgagcat gttccgatgc
     3481 ctgcaacaca aactgaataa tcggcgaaaa cagttgttgg tcgataatca ccgcgactac
     3541 cgagaaaaac accgtcaaca gtgcggtgaa tggcagagat tcggtgaagg ctttaccgat
     3601 agcatgttca tcggtgacac cggtcaatga tgtcgccaga ataatgaccg acaaaccaat
     3661 caagccaacc tccgccagat gcaacgccag cgcagtcacc agccagacgc cgataatcgc
     3721 ctggacaatc agacggattt tatcctgacg ggtacgctgg tggcggcttt gatcgtcaaa
     3781 ctgttgcaac acttcgcgga ctttctccgg cagcgtttca ccgtagccaa accaacgcag
     3841 cttctctacc agcaggcagg ttaacaggcc acaaatcaga accggaacgg tcaccggcga
     3901 catgcgcagg aagaaatcgc caaaatgcca gccagccgct ttagcgatga tcaggttctg
     3961 tggttcgccc accatggtca ttacgccgcc taatgcggtg ccgacaccgg catgcatcat
     4021 caggctacgc agaaagccac ggaactgttc cagaaccact ttgtaatgct tgtcgatatg
     4081 actatcgtct tgcaggtcgg tatcttcagt acgggaagag gctacgcggt gataaatacc
     4141 ataaaaaccg actgcaacgc tgatcaccac cgccacgacg gttaaggcat cgaggaacgc
     4201 ggagaggaac gccgccgcca cgcaaaaaga gagcgacagc agcattttgg aacgaatgct
     4261 taacagcaaa cgggtaaata tgaacagcaa tagctgtttc ataaaataga tacccgccac
     4321 cataaacatc agtaacagca agacttcaag atttgccgcc acctcttcac ggacgtgttc
     4381 cgcgctggtc atgccgatga ataccgcttc aatagccaac agaccaccgg ggagtagcgg
     4441 gtagcatttc agggccatcg ccagagtgaa aataaattcc gctaccagca accagccagc
     4501 gacgaaaggg ctgatgagga aaattaacgg atttacgatt aagaaaatga tgagggcgag
     4561 tttgtaccag tcgggggact ggcccaaaaa attgcgccat agcgcgcggc cccaggagat
     4621 ctccatgatg gtttccctta ccttacaaat aatcaatgat gtttttatgt ttaaacgcaa
     4681 agcttaacgg tcaggcagga gtgaggcaag tcttgatagt caaggggaaa gagatgcgga
     4741 aaatgaagcc ttgatccctt ttttcttctt tttgtctgct atcagcgtag ttagccctct
     4801 ggtatgatga gtccaacttt gttttgctgt gttatggaaa tctcactatg gtcattaagg
     4861 cgcaaagccc ggcgggtttc gcggaagagt acattattga aagtatctgg aataaccgct
     4921 tccctcccgg gactattttg cccgcagaac gtgaactttc agaattaatt ggcgtaacgc
     4981 gtactacgtt acgtgaagtg ttacagcgtc tggcacgaga tggctggttg accattcaac
     5041 atggcaagcc gacgaaggtg aataatttct gggaaacctc tggtttaaat atccttgaaa
     5101 cactggcgcg actggatcac gaaagtgtgc cgcagcttat tgataatttg ctgtcggtgc
     5161 gtaccaatat ttccactatt tttattcgca ccgcgtttcg tcagcatccc gataaagcgc
     5221 aggaagtgct ggctaccgct aatgaagtgg ccgatcacgc cgatgccttt gccgagctgg
     5281 attacaacat attccgcggc ctggcgtttg cttccggcaa cccgatttac ggtctgatcc
     5341 ttaacgggat gaaagggctg tatacgcgca ttggtcgtca ctatttcgcc aatccggaag
     5401 cgcgcagtct ggcgctgggc ttctaccaca aactgtcggc gttgtgcagt gaaggcgcgc
     5461 acgatcaggt gtacgaaaca gtgcgtcgct atgggcatga gagtggcgag atttggcacc
     5521 ggatgcagaa aaatctgccg ggtgatttag ccattcaggg gcgataatcc cttccgttta
     5581 aaaagcaaac ccctcaaacg aggggttttt tgttgttttt acagatttcc cattcttggc
     5641 gggcaacgtt ccagcaactc gacgctgcca tcttcgtttt gctgttccag catcacatca
     5701 aatccccaca ggcgatgcac atgcttcagc acttctttgc gcccccgatc cagcggtgcg
     5761 cgattatgtg gaatgtaacg cagcgtcagc gaacggtcgc cgcgcaaatc cacgttccag
     5821 atctgaatat tcggctccag attacttaag ttatattgcg acgataaccg gttacggatc
     5881 tcccgataac cttcttcatt atgaatagcg gaaatctcca gataattatg ccgatcgtca
     5941 tccagcacgg tgaagaagcg gaaatcacgc atcactttcg gtgacagaaa ctggctgata
     6001 aaactctcat ctttgaaatc acgcatcgcg aaatgcagcg tttccagcca gtcggaaccg
     6061 gcgatatccg ggaaccagta tttgtcttct tccgttggcg actgacaaat ccgtttaata
     6121 tcctggaaca tggcgaaccc gagggcatac gggttgatgc cgctgtacca cgggctgtta
     6181 taggggggct ggaagaccac attggtgtgg ctgtgcaaaa actccagcat aaaacgttcc
     6241 gttactttcc cttcatcata cagatggtta aggatggtgt agtgccagaa ggtggcccag
     6301 ccttcgttca tcacctgagt ctgtttttgc ggataaaaat actggctcac cttacgcaca
     6361 atacgcagga tttcacgctg ccatgattcc agcagtggcg catttttctc cataaaatag
     6421 agcaggtttt cttgtggttc ggacggatag cggcgcgctt cagcaaccgt tttctcttcc
     6481 tcgcgcttcg gcagggtacg ccagagcata ttgacctgac tttgtagata ctcttcgcga
     6541 cttttctgcc gggctttctc ttcttgcagc gagatttttt gcgggcgttt gtaccggtcc
     6601 acgccgtagt tcatcagcgc gtggcacgag tccagaagcc gttctacttc atccacgcca
     6661 taacgttctt cgcactcggt aatatattta cgggcaaaaa tcagataatc gacaatcgaa
     6721 ctggcgtcgg tccaactgcg gagtaagtaa ttgtttttaa agaaagagtt atgcccatag
     6781 caggcgtgtg ccatcaccag cgcttgcatg gtaatggtgt tctcttccat caggtaagcg
     6841 atacacgggt tagagttaat gacgatttca taggccagtc cttgctgacc gtgcttatac
     6901 agccgttcag tctcgataaa ctttttaccg aatgaccagt gcggatagtt aattggcatg
     6961 ccgacgctgg agtaggcatc catcatctgt tctgaggtta tcacttcaat ctggtgcggg
     7021 taggtatcca gccggtagag tttcgccacc cggtctatct ctgccagata aacatccagc
     7081 aggtcgaacg tccagtcggg tccatcgctc aaccgtgtgg tgtccttatt catagaatcg
     7141 atcgtcgcca tacgcgcacc tcattgttgt cggcgctctc tgtgtggagc acctcatttc
     7201 aagcatagaa cacctgttaa aaaccgcgtc gccggagaat ttttttcttt gcgatttctt
     7261 attatcagag tgccactaat ccgcttctga acggaatttt atgctggata aaaagggcgt
     7321 tcagcaggag atactaaaga cgccatattg ccgcagagtc agggagatgt gagccagctc
     7381 accataaaaa agctgtatgt tgaataatat tttcaactga gttatcaaga tgtaattaga
     7441 ttattattct tttactgtat ctaccgttat cggagtggct atgcgagttg tcatactggg
     7501 aagtggtgtg gtaggcgttg ccagcgcctg gtacttaaat caggcaggac atgaggtcac
     7561 cgtcattgat cgggagccgg gggccgccct ggaaaccagc gccgcgaatg ccgggcaaat
     7621 ctcccccgga tatgctgcac cgtgggcggc accaggtgtg cctttaaaag cgatcaaatg
     7681 gatgttccag cgccatgcgc cgctggcggt tcgtctcgac ggtacgcagt ttcagttgaa
     7741 atggatgtgg caaatgttac gtaactgcga caccagccac tacatggaaa acaaagggcg
     7801 gatggtgcgt ctggcggaat acagccgtga ttgcctgaaa gcattgcgcg ccgaaaccaa
     7861 tattcagtat gaagggcgtc agggtgggac gctgcaactg ttccgtaccg aacaacagta
     7921 tgaaaatgcg acccgcgata tcgccgtgct ggaagatgcc ggcgtaccgt atcagctgct
     7981 ggaatccagc cgcctggcgg aagtggagcc agcgctggca gaagtagcgc acaaactgac
     8041 gggtggtctg caactgccca atgatgaaac cggagactgc cagctgttta cccagaatct
     8101 ggcgcggatg gcagagcagg cgggggttaa attccgcttt aatacgcccg ttgaccaact
     8161 gctttgcgac ggcgagcaaa tctacggcgt gaagtgtggc gatgaagtga ttaaggccga
     8221 tgcgtatgtg atggcgtttg gttcttactc gacggcgatg ctcaaaggca ttgttgatat
     8281 tccggtgtat ccgctgaaag gctactcgct gactattcca attgcgcagg aagatggtgc
     8341 gccagtatcc accattcttg atgaaaccta caaaatcgcc attacccgtt tcgataaccg
     8401 cattcgtgtt ggcggaatgg cggaaattgt tggttttaac accgagctgt tgcaaccgcg
     8461 tcgtgaaacg ctggaaatgg tggttcgcga tctctatcca cgcggcggtc atgtcgagca
     8521 ggcgactttc tggacgggtt tgcgcccgat gacgccagac ggtacgccgg ttgtcgggcg
     8581 tacacgcttt aaaaatctgt ggctgaatac cggtcacggc acgctcggct ggacgatggc
     8641 ttgcggttcc ggtcagttgt taagcgatct gctctctggt cgcacgccag cgatcccata
     8701 tgaggatcta agcgtagcgc gctacagccg tggatttacg ccatcacgtc cgggccattt
     8761 acatggcgca cacagctaag gaaacgagat gacccgtccg atacaggcca gcctcgatct
     8821 gcaggcatta aaacagaatc tgtccattgt ccgccaggcc gcgccgcacg cgggtggtaa
     8881 aagcgaacgc ttacgggcat ggtattgagc gtatctggag cgcgctcggg gccaccgatg
     8941 gctttgcatt acttaacctg gaagaggcaa taacgttacg tgagcgcggc tggaaggggc
     9001 cgatcctgat gctggaagga tttttccatg ctcaggatct ggagatttat gaccagcacc
     9061 gcctgaccac ctgcgtacac agcaactggc agctcaaagc actgcaaaat gcgcggctaa
     9121 aagcaccgtt ggatatttat cttaaagtga acagtgggat gaatcggttg ggcttccagc
     9181 ccgatcgcgt gcttaccgtc tggcagcagt tgcgggcaat ggcgaatgtt ggcgagatga
     9241 ccctgatgtc gcattttgcc gaagcggaac atcctgatgg aatttccagc gcgatggcgc
     9301 gtattgagca ggcggcggaa gggctggagt gtcggcgttc gttgtccaat tcggcggcga
     9361 ctctgtggca cccggaagcg cattttgact gggttcggcc tggcattatt ttgtatggcg
     9421 cttcgccgtc cggtcagtgg cgtgatatcg ccaataccgg attacgtccg gtgatgacgc
     9481 taagcagtga gattattggt gtccagacgc taaaagcggg tgagcgtgtg ggctacggcg
     9541 gtcgctatac tgcgcgcgat gaacagcgaa tcggcattgt cgccgcaggg tacgccgacg
     9601 gttatccgcg ccacgcgcct accggtaccc ctgttttagt ggacggcgtg cgcaccatga
     9661 cggtggggac cgtctcgatg gatatgctgg cggtcgattt aacgccttgc ccgcaggcgg
     9721 gtattggtac gccggttgag ctgtggggca aggagatcaa aattgatgat gtcgccgccg
     9781 ctgccggaac ggtgggctat gagttgatgt gcgcgctggc gctacgcgtc ccggttgtga
     9841 cggtgtaact tgttgtaagc cggatcggag gcaacgtctt ctgggtgcaa aaaaaatcat
     9901 ccatccggct ggtcagcaac tgtagttgtt aatgtgacag agccattgcc catgatagtg
     9961 tccattaaaa ggatggacac tatttccccg gaacctgaac tcaccgcaca ggcgttctac
    10021 ataaaacgct tacgcttcat tgttgactcg gagtcgactt cagataaatc acgctttacc
    10081 cttgatggag cctgtacata gatttgtgta attgcctgat tttgatatgt tcaattcaac
    10141 atcaaatgaa ggttaaatta tggacgacaa acaattgcag gctcaggctg cgttcagcaa
    10201 agcatcgcaa ccggcgatag atgcttcatt aaatttaaga ttcagcttcc tcttcagcca
    10261 cccgtacgcc aatcttcaac acttcattat cttctttctc ggccaccgtc cagatcatcc
    10321 cggcaaactc tacctggtca ccgacaaccg gtgccgtgcc taacaactgc tggacaattt
    10381 cacccagcgt ttgctgctta tcacgatatt ctcgcccgtc ttccaggcca tatatcagcg
    10441 caacatcagc atatttggcg ctggcttcga gaatgaagtc accaaagaag cgttgatcca
    10501 gcgcgaccgg cggcgactgg ctgaacagtt taccgagcgc cggaagatcg cgttcccgac
    10561 caattacaca caacacatcg ccttcgcgca gtcgggtgct gccggtagga tgaagcaact
    10621 ggttatcacg aaacagtgcc gcaatacgcg tctcttttgg catatgcaaa tcgcgcagtg
    10681 ccgcgcccac gcaccattta tcggcactca attgataaac aaactgctcc cacggatttt
    10741 ccggatgaat atccaggcca acgcgtgaca ccggacgtcc cactggcgga accaccactt
    10801 tggctttttt agccgcccac gagagtgatg ttccctgcaa gagcagtgaa accagaacca
    10861 caaagaaggc gacattaaag aacagacgtg cattctccag ccccgccatc atcgggaaca
    10921 cggccaggat gattggcacc gcgccgcgta atcctaccca gctgataaac acgcgctcac
    10981 gcagattgaa accgcggaag gggagcaatc cagcaaatac cgaaagggga cgggcgaaga
    11041 atatcatcca tgccgacaaa attagcgccg gaatggcaat aggcagcaga tcgcttgggt
    11101 taaccaatag ccccagcacc aggaacatgg cgatttgcgc cagccaggcg aggccgtcga
    11161 aattttgcag gatgccgtag cggttgcgaa tcggccgatt acccagcaga aaaccgcaca
    11221 gataaacagc cagaataccg ctgccttcca gcgccgtggt taaagcaaaa attaaaatac
    11281 cgccgcttaa tgccagcaat ggatataatc cggcaggcag ggcgatgcga ttaatcattt
    11341 gcagcagtaa ataaccaccg ccaagtccga tgacaatccc gaggccaaat tgctgcagaa
    11401 tatcgaccac gaacatccaa ctgacactgc tttcatgttg ctggatcatc gcaatcaggg
    11461 taatcgtcag aaagaccgcc attggatcat tactgccgga ttcaatttcc agcgtcgagc
    11521 caacacgttc gttaagcccc ttaccaccca gcagagaaaa gaccgctgca gcatcggtag
    11581 agccgacgat agcgccgatt aataagcctt caatcaaatc aagattaaac agccacgccg
    11641 ccatcatgcc ggttaaacca gaggtgataa gcacgcccag cgtcgccagc gacagtgccg
    11701 gtcctaacgc cacacgaaag gaactggcct gagtgcgcat cccgccgtcg agcaaaataa
    11761 tcgccagtgc caggttactt accatgtagg cgaaggggta attatcaaac gggataccgc
    11821 cgacgccatc gactcctgcc agcatgccga tcgccagaaa aataaccaga ataggaatgc
    11881 caagacggga agaaaatgaa ctaagtaata tactgctggt gacaaggatg gatcctaaga
    11941 tgaaaaggct aattattgtt gtggcatcca acggtcggtt actcctgatt acgctgtctc
    12001 ttatataaac cctaccatat tagcggcaga gacagcgttt tacttagccc tgaagcgtga
    12061 tttttttaca ttttaagaac aggatgaccg ctaatcgtca actgagtgcc ttcccgggtg
    12121 ttattcagaa tggcatgtgc gcccaacggc agcgtaaccg tgcgttgttc atgaccaaaa
    12181 tcgaggccgg taatgagtgg aatcgacagg cgggaacgca aaaacgcgga cactgactcc
    12241 aggttgtaac ctgcgtcata atcattgggc gtgctgccgc taaagctacc gagaataatc
    12301 gccttctgac gtggcaaaat tcccgcatga tagagctgca acagcatacg ttcgacgcgg
    12361 aaagggtgct cgttaatatc ttccagtacc aggataccgt tctcaatttt tggcatccac
    12421 ggtgtaccaa tcagtgaaat cagcatcgca agattgcctc cccacaacgt gccttcggtc
    12481 tgacatgtcg ggccttcccc ttgccattca atggtgaagg ttttattgcg taacgccagc
    12541 cagaaatggt gctcggtaaa ggcgttcagt tcatccgcac caaagtttgc taccagcatg
    12601 gggccgctaa aggtgatgac attgccttgc gccagaagac cgcactgaat ggcggtaaaa
    12661 tcgctatgtc cgcaaatgag taacgggtca tgttgttggc gagccaccag tgcctgccag
    12721 tcaatatctg ccagtaaacg actggcaccg taaccgccgc gtacagccag cacgatggtg
    12781 ttgggtgtag tcagtctggc aagggaattg agatcttcca gacgctccgt ttccgtaccc
    12841 gcaaaacgct cacaacgacg ggcaataacc tcgacgttat tgacttgatg ccccgcgtcg
    12901 gtaaggcgct ggataccacg cagcgcggcg tgctgtttaa tgctgtaacc cgatggggca
    12961 attaagtgaa acagagacat ggcaattcct tgctgacaac agaaacgaaa tgtatatcat
    13021 gccgcttagg tgtgccgttg tcacctcaac ggcgattcca ggctataagg atagaagaag
    13081 tgaaattgag atggtttgcc tttttgattg tgttattagc gggttgttca tcaaagcatg
    13141 actatacgaa cccgccgtgg aacgcgaaag ttccggtgca acgtgcgatg cagtggatgc
    13201 caataagcca gaaagccggt gcagcctggg gcgtcgatcc acaattgatc acggcgatta
    13261 tcgctatcga atcgggtggt aatccgaacg cggtgagtaa atcgaatgcc attggtttga
    13321 tgcagttaaa agcttcaacc tccggacgtg atgtttatcg ccgtatgggc tggagtggtg
    13381 agccgacgac cagcgagctg aaaaatccag agcgtaatat ttcaatgggg gcggcttacc
    13441 tgaatattct ggaaaccggc ccgctggcag gcattgaaga tccgaaggta ctgcaatatg
    13501 cgctggtggt gtcatacgct aacggggcag gtgcgctgct acggactttc tcgtcagatc
    13561 ggaaaaaggc gatcagcaaa atcaacgatt tggatgctga cgagttcctc gatcacgtag
    13621 cgcgcaatca tcctgcgccg caggctccgc gctatatcta caaacttgag caggcactgg
    13681 acgcgatgta aatcagtcgc gtactttgtc cgctttctcc cgggcttccc gctcgagaga
    13741 gaaaataatc cgttgtaatt gccgctccac cgtcgggctg acgttaagaa aacggaagct
    13801 cagacgggga gtggtgatgg tttcattctt gccatcaatc actttgcgct cgctgatgga
    13861 gattaactgg gcgtcaaagt gaaaaacacc ccattgcccc atgttgactt caatctgagc
    13921 gaagcgcatg ccttcttgta attcggcagg ctttgctgtt tccagtaatg cgcccatgcc
    13981 gcctaacgac aaatcataca ggcggaaacg taacgtactg ttatccgcca gtttggtctg
    14041 gcaaaaataa ggcggatgga gtggggcgga gatgcggaaa tatcggcgtc gttgtacaaa
    14101 ccataaggtg ggaggcggta cggtaataaa tgccggaagc tgcaagtatt cactctgctg
    14161 tagttgttca acagtaaact cgactttcgc accctgagtt tcggcggtaa tggtaatatg
    14221 ctgcgccttt agcacggcga tgttgtcttc ggcttgactg ccgaaatcca gcaccagttt
    14281 atccggggtt attgccagta ttttgctgat cagctgcccg ccattccaac tgagacgcaa
    14341 aggaattgcg gctttgtgca aatcgcgtaa cacgcccagg acggctaacg gattttgttt
    14401 caggaactgc tcatggtaat gactcacgcg gaaaaactcc tgactgacaa actgtctttg
    14461 gtttatcggt cacagttaac aaaacttaat acaaatgcgt gaatattttt tacatgttgt
    14521 tcttaaatca gccgacatac gcccagcatc gatcccgccc ttgcctatac ttagagcgtt
    14581 gacgtaagca tttcttgcgt ccgattcatc gaaacgaggg cttgaacatg ggaattattg
    14641 cctggattat ttttggcctg atagccggca ttatcgccaa gctaatcatg ccggggcgtg
    14701 atggtggtgg atttttccag acctgtattc tcgggatagt cggtgcggtg gtcggcggct
    14761 ggctggcgac catgtttggc attggcggct ccatcagcgg ttttaatttg cacagcttcc
    14821 tggtggcggt ggtgggagct attctcgttc tgggcttatt ccgcctgctg cgaagagaat
    14881 aagattttca taaggcggat agcgatacag atgccgctat ccgcttttca catcagaacg
    14941 tatattcgac acctgcttta cgggtgaaaa aaatcaatat agcacttcga tatccgataa
    15001 agtcggttcc cggtaacaac aacagaatcc ttttttaatt attgtttcgt tgtttttggt
    15061 gtgattcaga aaataaatat tttagacagt agccagtcag gcgttaaaaa tggggcggat
    15121 agtgaggcgg ttttggctgc gcttattgaa catttagaat tgatcaatcc ttctggcaga
    15181 ttaagccaaa atacccgttc ggcaatgctt cagttacgcg aagaggaatg gtctgaattc
    15241 tttttttggt tgctaaattc tctggagtgt ctggattatg tgattattaa tttaactcca
    15301 gaaagcaaaa aaacgttgat gagtgaacac cgtaacaata ttcaggtagc aatcgatgct
    15361 ttatataggc aacgtcggtg taaatcaccg ggggatgata gtgaaacact tacccgtaga
    15421 aatgacgcta tcttcggcaa ccacgtatgg caaacatttg cgcaatactt cccgccagga
    15481 cttgaaaaac cggctgtgta gaaaacacca tagctatggt gttatctgcc gacaacgcca
    15541 tccggagaag ccgaatgacg ttgtcggagt aagcgctggt taaggtgtgg gttgtgcctc
    15601 tttggttgag ggttgcgtcg ttgctgactt aacggtcgga cgcgtcgccg gaacattgtc
    15661 acacggttgc tctttcgggc agatcaaatc cagcattttc agcgtcacgc cattggtcca
    15721 gccaaagcca tcctgtaatg gatattcgcc acctcttttt gcccgtagtt ttgtaatcct
    15781 tctgtcgcga cccactgtaa cggtgcccag ccatttggcg catcccattg ttgcccactt
    15841 ttcaccgacg tggtgttcag gccgccgggt tgcagcagat gtgttttcgt cgccgtcgcc
    15901 attttgttgg cgcgatcttt cgctgccgca ttgacgtaca gcgggaacag ggcggccgcg
    15961 gttaactgat tgcgcacttt atgacttttc aggtcgtaat cggcatacca gccttgttga
    16021 tcgttccaca ggtatttttc gattcctttt tgacgggcat tcgccagcgt ttcgtactgg
    16081 tttgccatcg cgttatctcc tgcagctttg ctggcgcggg cgaggatttt ttccatttta
    16141 aacatcaggc tgttcagatc gaccggtacg atgctggtgg tgcgtaaggt atttaactgc
    16201 tgcgggttgt ccatccagcg cgagctgaaa tcccagccag acgcagcggc agagcgcagg
    16261 tcgcggtaaa tttcagtggc aggtcgattc ggattgcttt tggcggtggc aatatcttcc
    16321 acccatgact ctggtcgtgg cgtatcgcga tcgtcccagt agcggttgag aagggtacca
    16381 tcctgaagtt tgacaacgcg tttttcctgt tgtccggctt gcaggttttc aacaccgtcc
    16441 atccagtaag catattcttt ttgcatttgc ggcaggtatt gcttcaacgc ggcatcgcct
    16501 tcatgctgcg ccagtaactc taccatcagg gcaaagaagg gcggttgcga gcggcttaaa
    16561 tagtaactgc ggttgccgtt gggaatatga ccgtaagtgt ctatttcatg agcaaaattg
    16621 gccaccatat ccgcgacttt atcccagtga ccgctttcag caagtcctaa catggtgaag
    16681 taactgtccc agtaatatac ctcgcgaaaa cgtccgcccg gcacgacata aggttccggc
    16741 agcggtaaca gagaatccca tttttcggtg ttttcggtag aacgcgttaa taccggccaa
    16801 agtccgtcaa tatgttcgcg cagtgactgc ccctctggcg gaacatattt ctcgccttct
    16861 ttcggcaggg tgaaattgac gttaacgaaa tggcgcagat caaatccgct ctggttttgc
    16921 tgcatccgat aatcagcgga tcgctgttcg gcacggcatc ggcaaaggtt ttttggtccg
    16981 gaaaaagttt ggcgttttgc acatcattaa acagcggccc taataaaata tcaggcggct
    17041 atggtgttac cggtgtttct tctgcctgca ccgatagcgc agcgaaacac aaaaagatac
    17101 aggct
//
LOCUS       DADKRT010000090        16969 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.091, whole genome shotgun sequence.
ACCESSION   DADKRT010000090 DADKRT010000000
VERSION     DADKRT010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 16969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16969
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.091"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            191..2038
                     /gene="ldtD"
                     /locus_tag="JQ356_002436"
     CDS             191..2038
                     /gene="ldtD"
                     /locus_tag="JQ356_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY4622502.1"
                     /translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
                     SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
                     MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
                     LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
                     AMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD
                     DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
                     GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG
                     NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
                     GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
                     HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
                     RQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR"
     gene            2219..2767
                     /locus_tag="JQ356_002437"
     CDS             2219..2767
                     /locus_tag="JQ356_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HAY4622503.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR
                     KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            2794..3441
                     /gene="gloC"
                     /locus_tag="JQ356_002438"
     CDS             2794..3441
                     /gene="gloC"
                     /locus_tag="JQ356_002438"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase GloC"
                     /protein_id="HAY4622504.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
                     SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC
                     QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
                     SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
     gene            complement(3663..4853)
                     /locus_tag="JQ356_002439"
     CDS             complement(3663..4853)
                     /locus_tag="JQ356_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HAY4622505.1"
                     /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARMAQTPG
                     GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
                     ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK
                     AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JQ356_002440"
     CDS             complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JQ356_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HAY4622506.1"
                     /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY
                     FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
                     TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
                     YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
                     TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
                     QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
                     YIINQIDSDNKLGVGSDDTVAVGIVYQF"
     gene            complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="JQ356_002441"
     CDS             complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="JQ356_002441"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HAY4622507.1"
                     /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNASF"
     gene            complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="JQ356_002442"
     CDS             complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="JQ356_002442"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706850.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HAY4622508.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
                     DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
                     DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
                     TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
                     AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
                     YQGLRHDSGDPVEWGEKAIAHYKKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
                     SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPHIKKAS"
     gene            9765..12377
                     /gene="pepN"
                     /locus_tag="JQ356_002443"
     CDS             9765..12377
                     /gene="pepN"
                     /locus_tag="JQ356_002443"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HAY4622509.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
                     HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPEHFTLKIVNEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKTKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVISLQKGGHPVNS
                     VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE
                     MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN
                     ACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH
                     QDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH
                     AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="JQ356_002444"
                     /pseudo
     CDS             complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="JQ356_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309043.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonates ABC transporter ATP-binding
                     protein"
     gene            complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="JQ356_002445"
                     /pseudo
     CDS             complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="JQ356_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001714028.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter permease
                     SsuC"
     gene            complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="JQ356_002446"
                     /pseudo
     CDS             complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="JQ356_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706856.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FMNH2-dependent alkanesulfonate monooxygenase"
     gene            complement(15112..16071)
                     /locus_tag="JQ356_002447"
     CDS             complement(15112..16071)
                     /locus_tag="JQ356_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4622510.1"
                     /translation="MRNIIKLALVGLLSVSTIAVAAESSPEALCIGYQKGSIGMVLAK
                     SHQLLEKRYPQSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG
                     VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
                     TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY
                     AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP
                     VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
     gene            complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="JQ356_002448"
     CDS             complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="JQ356_002448"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HAY4622511.1"
                     /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFVP
                     EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
                     LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR
                     LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
BASE COUNT         4262 a         4361 c         4306 g         4040 t
ORIGIN      
        1 taacggcgcg cttttcttta aacttcttta cattaggtta tgtaaaaacg tatcggcgtt
       61 tatatactga agataagcct gatgagtaac aggcttgctc gtcatacttt cgtgagtatt
      121 ggcgttgtac aggcaagtcg taaaataaca gcctggctat tcagagtatg ataaaaacag
      181 ggggcaaggg atgttgctta atatgatgtg tggtcgtcgg ctgtcggcaa tcagtttgtg
      241 cctggccgta acattcgctc cactgttcaa tgcgcaggcc gatgagcctg aagtaatccc
      301 tggcgacagc ccggtggctg tcagtgaaca gggcgaggca ctgccgcagg cgcaagccac
      361 ggcaataatg gcggggatcc agccattgcc tgaaggtgcg gcagaaaaag cccgcacgca
      421 aatcgaatct caattacccg caggttacaa gccggtttat cttaaccagc ttcaactgtt
      481 gtatgccgca cgcgatatgc aacccatgtg ggaaaaccgt gatgctgtta aagccttcca
      541 gcaacagctg gcagaggtgg cgattgccgg tttccagccg cagtttaata aatgggtaga
      601 gttactgacc gatcctggtg ttaacgggat ggcacgcgac gtagtgctct ctgatgcgat
      661 gatgggctat ctccatttca ttgcaaatat tccggtcaaa ggcactcgct ggctatatag
      721 cagtaaacct tatgcacttg caacgccgcc gctctcggtg attaaccaat ggcagctggc
      781 gctggataaa ggtcaattgc ctacgtttgt tgcaggactg gcaccgcagc atccgcaata
      841 tgcggcgatg catgaatcgt tactggcctt actcagtgac accaaaccgt ggccccaact
      901 gaccggcaaa gcaacgttgc gcccagggca gtggagtaac gacgtaccgg cgttgcgcga
      961 aatattgcaa cgcacaggca tgttggacgg ggggccgaaa attactctac ctggcgatga
     1021 cacgccaact gacgcggtag tcagcccatc cgctgttact gttgaaacag cagaaactaa
     1081 gccgatggac aagcaaacga cgtctcgtag taaacctgcg cctgccgttc gcgccgccta
     1141 cgataatgaa ctggtggaag ccgttaaacg ttttcaggca tggcaaggat tgggggcaga
     1201 tggtgctatt ggcccggcaa cacgtgactg gttaaacgta acgcccgccc agcgtgctgg
     1261 cgtgttggct ctcaacatcc agcgattgcg cttgctgcca acagagcttt ctaccgggat
     1321 catggttaac attccggcct attcgctggt ctactatcag aacggcaatc aggtgctgga
     1381 ttcgcgagtc attgtcggtc gccccgatcg caaaacgccg atgatgagca gtgcccttaa
     1441 caacgtagtg gtaaacccgc cgtggaacgt acctccaact ctggcacgca aagatattct
     1501 gccaaaagtg cgcaacgatc cgggatatct cgaaagccat ggctatacgg tgatgcgtgg
     1561 ctggaacagc agagaagcga ttgacccatg gcaggttgac tggtctacaa tcacggcctc
     1621 gaatttaccg ttccgcttcc agcaggctcc aggcccacgg aactcgctgg ggcgctataa
     1681 attcaatatg ccgagttcag aggccattta tttgcatgac acgccgaacc acaatctgtt
     1741 caagcgtgat acacgcgcat tgagctcagg ctgtgtacga gtgaataaag cttccgatct
     1801 ggcgaatatg ctgttgcagg atgcaggctg gaatgacaaa cgtatttctg atgcgctgaa
     1861 gcagggtgat acacgttacg tcaatattcg gcagtcgatt ccggtgaatc tctactacct
     1921 gacggccttt gttggtgcag atggtcgtac ccagtatcgt acagatattt acaattatga
     1981 tctgcctgcg cgatccagct cgcaaatcgt atcgaaagcg gaacaattaa tcaggtaaat
     2041 gaagtagttc ggggaaatca gttgtcgtaa taattagcat gattgggggc gattctctgc
     2101 agcccccgtc actgctgggg ttgagtcatc ttgacgtctg ctttacgggc ggttaaggtg
     2161 cctcttgtgc gccagaagtg catataaacg ataacattga cctgtagact tgattatcat
     2221 ggacaaattc gacgctaatc gccgcaaatt gctggcgctt ggtggcgttg cactcggtgc
     2281 cgccatcctg ccgacccctg cgtttgcaac actctctacc ccacgcccgc gcattttgac
     2341 actcaataat cttcataccg gagagtcaat caaagcggag tttttcgatg gcagaggcta
     2401 tattcaggaa gaattggcaa aacttaacca ttttttccgc gattaccgcg cgaacaaaat
     2461 aaagtccatc gacccaggat tattcgacca gttgtatcgc ctgcaagggt tgttaggcac
     2521 gcgcaaaccg gtgcaactca tttccggtta tcgttccatt gataccaaca atgaactacg
     2581 cgcccgcagc cgtggagtag cgaagaaaag ctatcacact aaaggccagg cgatggattt
     2641 ccatattgaa ggtatcgcgt taagcaatat tcgcaaagcc gcgttatcta tgcgcgcagg
     2701 tggtgtagga tattacccac gtagtaactt tgtgcatatt gataccgggc cagcacggca
     2761 ctggtagcaa tcgcttaacg aaacaggggc agtatgaact atcgtattat tccggtcacc
     2821 gcattctccc agaactgttc attaatctgg tgtgaacaaa cccgtctggc cgcactggtc
     2881 gatcctggcg gcgatgcgga aaaaatcaaa caggaagttg atgacagcgg cctgacactg
     2941 atgcagatcc tgctgacgca tggtcatctg gaccacgttg gcgcagcggc ggaactggcg
     3001 caacattacg gcgtgccggt ttttggcccg gaaaaagaag atgagttctg gctgcaaggc
     3061 ttgcctgcgc aaagtcgtat gtttggtctg gaagagtgcc agccgctgac gccagatcgt
     3121 tggctgaacg aaggcgatac catcagcata ggaaatgtga ctttacaggt gttacattgc
     3181 cctgggcata cgccgggtca tgtcgtgttt tttgatgatc gggcaaagct gctgatttct
     3241 ggcgatgtta ttttcaaagg cggagtaggg cgcagtgact tcccgcgtgg cgatcataat
     3301 caactgattt cttcaatcaa agataaattg ctgccactgg gggatgacgt gacatttatt
     3361 ccgggtcacg gaccattatc cacacttggt tatgaacgcc tgcataatcc cttcctgcaa
     3421 gacgaaatgc ccgtctggta aggcacataa aaaagcccgc ttttaatgcg ggcctggatt
     3481 tctggcaaag tgcgctttgt ttatgccgga tgcggcacga gcgccttatc cggcctacaa
     3541 aatcgtgcaa attcaaaata ttgcagggga cgcgtaggcc tgataagcgt agcgcatcag
     3601 gcaatgttgc gtttgtcatc agtctcagcc cgcttttcag cgggcttcat tgtttttaat
     3661 gcttacagca ctgccacaat cgcttcgcac agcggagcca tgttatctgg tgtcatcccg
     3721 gccacattta cgcgaccaga agcaaccgca tatacgccaa actcttcgcg cagacgcagc
     3781 acttgttctt ttgtcaggcc actgaaggag aacatgccgt tctgtttgat gataaagctg
     3841 aagtcgcggt ttgcgccttt ttcctgcagc gtattgacga acaactgacg catacgctga
     3901 atacgctggc gcatatcagt cagctcttgt tcccaaatcg cacgtaacgc atcgttgctc
     3961 aggatggtgg caacaacaga agcgccgtgt gctggtgggt tagagtagtt agcgcgaatc
     4021 gccgctttca tttggctgaa tgcgcgatca acggtttcac tgtcggcagc aaccagagta
     4081 caagcgccaa cacgctcgtt gtacaggcca aagtttttag agtaggaact ggcaacaatc
     4141 agctctttat gcatagccgc gaaagcgcgc agtccttcag catcttcttc cagaccacgg
     4201 gcaaaaccct ggtaagcgaa gtcaaacagc ggtaaccagc ctttctcaac ggagagttgt
     4261 gccagtgtct gccattgttc cagcgtaggg tcgataccgg ttgggttatg gcagcagcca
     4321 tggaacagca ctacgtcgcc agcctgagct tcattcaggc tgttaatcag tgcatcgaag
     4381 tcaagagtgt gattttccgc atcataataa gcgtattcac gaacttccag acctgcagag
     4441 ttaaagacgc tcttatggtt cggccagctt gggttgctca cccacactcg cttaacgctg
     4501 gtattttttg ccaggaaatc ggcagctacg cgtagtgcgc cagtgccccc cggagtctgt
     4561 gccatgcgag cacgtttgtc attgatcagg gcgctacctt taccaaacag cagttcctga
     4621 gtgcagcgac caaattcagg gatgccgtca atgccgaggt aatttttggt ggtttcattt
     4681 tcgagcagat actgttcagc ctttttcacg ctggtcagta ccggggtttt gcccgtctca
     4741 tctttataga caccaatccc gaggttaatt ttgccgggac gttcatcggc acgaaacaga
     4801 tcggccaggc ccagaatcgg gtcggcagga gcggcggtaa tgttctcaaa catgacgagg
     4861 ttccattatg gttacagaag ggaagtccgc tatcagggta acgggagatt tacaaaattc
     4921 caactattac tgatgaaaac gcaggctgtt tttgcaagac gtgagattgc tctggaaggt
     4981 ataaaaaaaa caggaccaaa gtcctgtttt ttcggcattt aacaaagagg tgtgctatta
     5041 gaactggtaa acgataccca cagcaacggt gtcgtctgaa cctacgccca gtttgttatc
     5101 agaatcgatc tggttgatga tgtagtcaac ataggtggac atgtttttgt tgaagtagta
     5161 ggttgcgccc acttcaaagt agttcaccag atcaacatca ccgatacctt ctacgtcttt
     5221 cgctttagat ttggtgtaag cgatggacgg acgcagaccg aaatcgaact ggtattgcgc
     5281 aactaacaga acgtcttgcg ttttgttggc gaagccgctg gtgtttgtaa atttattagt
     5341 gatcggcgta gcgttacggg tttcaccgta gttcgctgcc aggtagatgt tgttcgcgtc
     5401 gtacttcaga ccagtagccc actgttcagc ttttttaccg ttgccaagag gttgagcttc
     5461 ttgcaggttg gtacggtcag ctgcaccata agcaccaacg ataccaaagc cttcgtattc
     5521 gtagctgata gaaccgccaa caccgtcgcc gttagaacgg cgtgcagtgt cacgctcgtt
     5581 tttacccagg tactgaacag cgaagttcag gccatcaacc agaccaaaga agttggagtt
     5641 acgataggta gcaacgccgc caacacgacc aacgaagaag tcatcgctgt atgcagtatc
     5701 accaccaaat tctggcagca tatcggtgta acccagtgca tcataaacca caccgtagtt
     5761 acggccgtaa tcgaaagaac caacgtcagc gtatttaaga cccgcgaatg ccagacgcgt
     5821 tttgttacca gtttgagcgt cagcgccttc agagttgtta ccttggaagt tatattccca
     5881 ctgaccataa ccggtcagat cggaattgat ttgagtttcc cctttaaaac caagacgggc
     5941 ataggtcatg tcgccattgc caccgtaact gttttcaccg ttacccttgg aaaaataatg
     6001 cagaccaaca gctttaccgt acagatctac tttgttgcca tctttgttat agatttctgc
     6061 agcgtttgca gtacctgcta ctaacagagc agggacgatc actgccagaa tattgcgctt
     6121 catcattatt tattaccctc atggtttttt ttatgacacc tgccactgcc gtcaataagt
     6181 tctgtcaata aaaatttacg gaactattga tgagagtttg gtgtctttat gtgtctgcag
     6241 gcatctttcc attcaaacta acgtttcgct accgtgaaag tgctgcaaag ataaagattt
     6301 agtttcaaaa agaaaaaata tgtaaccaaa agtaaaaatt aaggaacttt gtgaacaccg
     6361 tcatatttcc atagaaacgt gatgatattt acagcaattt ttatctattt atatgattta
     6421 cttatattta aattaactaa gcggaaattt tgtttctgat ggaaacttta tcgacctggc
     6481 acaaaatcct ctttcagaca tccagaatgc caaaaaatag tatgaaaatt gtgctatcag
     6541 ctaagaaaaa actaatccgc aataagaata cgggttattt tttgtgcgta aatgttgcaa
     6601 tgtaatattc cgtaacagga tgatcgttat ggcggggttg caaatagatt gcttgactta
     6661 acaaacagat aacttgacag aaaggataaa aaagagccag caggcgctgg ctctttgagg
     6721 aagaaaatca gaagctggcg ttgcgcggag tacgtgggaa cggaatcaca tcacgcacgt
     6781 tttgcacgcc agttacgtaa gcaatcaggc gttcaaaacc aagaccgaaa cctgaatgcg
     6841 gaacagtacc gtagcgacgc agatcgcgat accaccagta atcttcttta ttcaggccca
     6901 tttccagcat acgctcgtcc agaacgtcca gacgttcttc acgctgggag cctccaatga
     6961 tctcaccgat gcccggagcc agaacgtcca tagccgcaac ggttttaccg tcttcgttga
     7021 ggcgcatata gaacgcttta atatctttcg gatagttttt aaccactacc ggtgctttaa
     7081 agtgttcttc cgccagataa cgctcatgct cagaagagag atcgacgccc cagtaaaccg
     7141 ggttttcaaa cttcctgccg cagttttcga gaatggtcac tgcgtcggtg taatccacct
     7201 gcgcgaaatc ggcctcaatg aagcgttcca gacgtgaaac ggcatcttta tctacgcgtt
     7261 cagcgaagaa tttcatgtcg tctgcgcgtt cttcgagaac cgctttgaag acatatttca
     7321 gcatggcttc agccagaccc gcgatatcgt tcaggttagc aaacgccact tccggctcca
     7381 gcatccagaa ttccgccagg tgacggctgg tgttggagtt ttcagcacgg aaagtcgggc
     7441 cgaaggtata aattttggat aatgcgcaag cgtaggtttc gccgttcaac tggccagata
     7501 cggtcaggaa agactcttta ccaaagaagt ctttgtcgaa atccactttg ccctgatcgt
     7561 tacgcggcag gttttccaga tccagcgtag aaacgcggaa catttcgcct gcaccttcgg
     7621 tatcagatgc ggtaatcagt ggcgttgaaa cccagaagaa tccctgctcg ttaaagaagc
     7681 gatgcagcgc ctgcgccagc gtatggcgaa cgcgcgcgac ggcaccaatc aggtttgtgc
     7741 gcggacgcag gtgagcgact tcacgcagat actcaatgct gtggcgtttt gccgccatcg
     7801 ggtaagtgtc tggatcttca acccaaccag caacttcaac tttgctggcc tgaatttcaa
     7861 attgttgccc ctggcccggc gacgccacga ctttacccgt cacaatgacc gagcagccgg
     7921 tggtcagacg caggacgtct tcattgtaat tgggcagaga attattgatg acagcctgta
     7981 caggatcaaa gcaggaaccg tcataaacgg cgaggaagga gatgccagct tttgaatctc
     8041 ggcgggtacg tacccatccg cgtacggtga cttcgctgtc aacggctacg cggccctgga
     8101 gtacgtcggc tacaggcaca acgctcataa tattctctct gttaatagtc ggaaaaaata
     8161 aacacttgtc cacccgtaaa tggggggata cctatgttac ctggcatctg caatcagaca
     8221 agcagaattc gcaaatgcag cgaaagattt cggaattaaa ggtaaaaaaa gggagctgat
     8281 tagctccctg atgatattaa ctggcttttt taatatgcgg aaggtcgaac gctttgcgca
     8341 gcgcccgaac aaacgcttta tcatggcaga tagttttgcc agggctgtca gaaagtttcg
     8401 ccaccggttt accgttacac tctaccaact taatcacaat attcaggggt tttacctggg
     8461 ggatatcgca ggtcaggcga gtcccaatac caaaacttaa ttgcacgcgg gaagagaagt
     8521 ggcggtatag ctcaaccgct ttgcgtaaat ccagattgtc agagaaaacc agcgttttac
     8581 tctgtggatc aattcccagc tttttataat gtgcaatggc tttttcaccc cattcaaccg
     8641 ggtcgccaga gtcatgacgc aggccctgat accgactggc gaactcgaca ccgaaatcac
     8701 gcaggaaagc atccatagtg atgcagtcgg ttaatgcaat gccaagttgg tcgggatatt
     8761 cttccagcca ggcagcaagt gcagctcgct ggctgttggc taggtccggg ctgatttgct
     8821 gatgtgcctg gaaccattcg tgcgcctgtg ttcccatcgg cgtgagggaa agccgacgcg
     8881 ccagatcgta gttgctggtg cccacgaacc aggattcctg ttgcagacgc ttaacgatgg
     8941 tttcttgtac ttcgcgagaa aaacggcgac gggtgccaaa atccatcaga tggaagcgcg
     9001 acatatcaag accggcggtt aacgccgaga agtcgactaa tttgctttcc agcgtgtcga
     9061 gggcttgcgc aacgtcggcc tgcggtgagc gatagcgatg taccatttca ctgataaccg
     9121 ccagcaaagg aacttcccag aggatgactt cacgccacgg accgcttaag cgaatatcca
     9181 gcttgccatt atcgttggac acggtgactt gttccgggtt aaagcggaat tcgcgtaacc
     9241 agttaagata gtcggcctta aagaaaggca gggcagagag ccactgatat tcatcatcct
     9301 gcaggcgcag gtgctgcatc gcctgaatct gttcacgaat agcatcggca taaataccca
     9361 gcagatcgtc acctcggcaa cgaaactccg ccgcgacatg cacatcgtaa tagtgatgaa
     9421 acacggcttg ctgcatatgc aacttataag catctgtatc cagcaacgag tgcagaacag
     9481 gagaagcgaa ttgtgtcata ggtgcgcagt agcatcctcg tacaggagcg tttagtacaa
     9541 taaacatctt caggaactgc tggagtatac cttgtttcgc aatttattga accccgatca
     9601 caccatatgc cacctttctg gtcgatggca ttacgcggtg tatgttataa aaatgtagca
     9661 ataaaggcgt ttgtacctga aaagatgaag attctgcata gcgcgattta cgcaacagga
     9721 atagactgaa caccagactc tataaaagat gctaaaggtt atttatgact caacagccac
     9781 aagccaaata ccgtcacgat tatcgtgcgc cggattacca gattactgat attgacttga
     9841 cctttgacct cgacgcgcaa aagacggtcg ttaccgcggt cagccaggct gtccgtcatg
     9901 gtgcatcaga tgctccgctt cgtctcaacg gcgaagacct caaactggtt tctgttcata
     9961 ttaatgatga gccgtggacc gcctggaaag aagaagaggg cgcactggtc atcagtaatt
    10021 tgccggagca ttttacgctt aagatcgtta atgaaataag cccggcggcg aataccgcgc
    10081 tggaagggct ttatcagtca ggcgatgcgc tttgcaccca gtgtgaagcc gaaggtttcc
    10141 gccatattac gtattatctc gaccgcccgg acgtgctggc gcgttttacc accaaaatta
    10201 ttgccgataa aaccaaatat cccttcctgc tttccaacgg taaccgcgtt gcgcaaggtg
    10261 aactggaaaa cggacgccat tgggtacagt ggcaggaccc gttcccgaaa ccgtgctacc
    10321 tgtttgcgct ggtggcaggc gactttgatg tactgcgcga cacctttacc acgcgttctg
    10381 gtcgcgaagt ggcgctggag ctgtacgtcg atcgcggcaa ccttgatcgc gcgccgtggg
    10441 cgatgacctc gctgaaaaac tcaatgaaat gggatgaaga acgcttcggc ctggagtatg
    10501 acctcgacat ctatatgatc gtcgcggtgg atttcttcaa tatgggcgca atggagaata
    10561 agggtttgaa tatctttaac tccaaatatg tgctggcccg caccgacacc gccactgaca
    10621 aagattacct cgatattgaa cgcgttatcg gccatgaata tttccataac tggaccggta
    10681 accgagtcac ctgccgcgac tggttccagc tcagcctgaa agaaggttta accgtcttcc
    10741 gcgatcagga attcagctct gaccttggtt cccgtgcagt taaccgcatc aataatgtgc
    10801 gcaccatgcg cggattgcag tttgcggaag acgccagccc gatggcgcac ccgatccgcc
    10861 cggacatggt cattgagatg aacaacttct ataccctgac cgtttacgag aagggcgcgg
    10921 aagtgatccg tatgatccac accctgctgg gcgaagaaaa cttccagaaa gggatgcaac
    10981 tctatttcga gcgccatgat ggcagcgcgg caacctgcga cgactttgtg caggcgatgg
    11041 aagatgcgtc gaatgtcgat ctctcccatt tccgccgttg gtacagccag tccggcacgc
    11101 cgattgtgac cgtcaaagac gactacaatc cggaaaccga gcagtacacc ctgaccatca
    11161 gccagcgcac gccagccacg ccggatcagg cagaaaaaca gccgctgcat attccgtttg
    11221 ccatcgaatt gtatgacaac gaaggcaaag tgatctcgtt gcagaaaggc ggtcatccgg
    11281 tgaattccgt gctgaacgtc acccaggcgg aacagacctt tgtttttgat aatgtctact
    11341 tccagccggt gcctgcgctg ctgtgcgaat tctctgcgcc agtgaaactg gaatataagt
    11401 ggagcgatca gcaactgacc ttcctgatgc gtcatgcgcg taatgatttc tcccgctggg
    11461 atgcggcaca aagcctgctg gcaacctaca tcaagctgaa cgtcgcccga catcagcaag
    11521 ggcagccgct gtctctgccg gtacatgtgg ctgacgcttt ccgcgcagtg ctgctcgatg
    11581 agaagattga tccggcgctg gcggcagaaa tcctgacgct gccttctgtc aatgaaatgg
    11641 ctgaactgtt cgatatcatc gacccgattg ctattgccga agtacgcgaa gcactcactc
    11701 gtactctggc gactgaactg gcggatgagc tgctggctat ttacaacgcg aattaccaga
    11761 gcgagtaccg tgttgagcat gaagatattg cgaaacgcac tctgcgtaat gcctgcctgc
    11821 gcttccttgc ttttggtgaa acgcatctgg ctgacgtgct ggtgagcaag cagttccacg
    11881 aagcgaacaa tatgaccgat gcgctggcgg cgctttctgc ggcggttgcc gcacagctgc
    11941 catgccgtga tgcgctgatg caggaatacg acgataagtg gcatcaggac ggtctggtga
    12001 tggataaatg gtttatcctg caagccacca gcccggcggc gaatgtgctg gagacggtgc
    12061 gcggtctgtt gcagcatcgc tcatttacca tgagcaaccc gaaccgtatt cgttcgttga
    12121 ttggcgcgtt tgcgggcagc aatccggcag cgttccatgc cgaagatggg agtggttacc
    12181 agttcctggt ggaaatgctt accgacctca acagccgtaa cccgcaggtg gcttcacgtc
    12241 tgattgaacc gctgattcgc ctgaaacgtt atgatgccaa acgtcaggag aaaatgcgcg
    12301 cggcgctgga acagttgaaa gggctggaaa atctctctgg cgatctgtac gagaagatca
    12361 ccaaagcact ggcttgataa ataaccgaat ggcggcaata gcgccgccat tcggggaatt
    12421 tacccctgtt ttctcaggcg aatttcagat tcaccacgct gcatcaccct ttgcaacact
    12481 tccgattcca gctccgctaa tcgcaccgac cctaatcgac gcggaggggg gatatccact
    12541 gtcaaatcca gaccaatttt tccctcttca attaataaca cccggtcagc cattgctacc
    12601 gcttcgctca catcatgcgt caccaacagt acggtaaagc cgtgctcctg ccaaagtgac
    12661 acaatcaaat cctgcatctc gagtcgcgtt aaggcgtcca gtgccccgag cggttcatca
    12721 agcaacaata aacccggtcg atgaatcaac gctcttgcca gcaccactcg ctgtttctgc
    12781 ccgcctgaaa gtgcggcagg ccattccccg gcgcgattct ccagtcctac cgcagccaac
    12841 gcccgacgcg cggcatcgcg ccactggcct ttaaggccta acccaacgtt atcaatcacc
    12901 gatttccacg gtagcagacg cgcatcctga aacatcattc gcgtgtcttc ctgaatttca
    12961 gccagcggtg tggtgcctgc caacacatcg cctgcggttg gcgtttccag cccggccagc
    13021 aggcgcagca gggtactttt gccaccaccg ccacaaactg acctgccgga atatgtaaat
    13081 ccagttggtt caggacgata ttttccgcgt aatgtttgct tactgcattg agcaacaatg
    13141 gtgtgccctg gttcagacga gcagtattca taccgtggcc tccttcaaat gataagccgg
    13201 gttccagcgc aaccagaggc gctctaacag ctgcgcgctg acgtcagcaa gtttgccgag
    13261 cagggcgtaa agaataatag cgactaccac cacgtccgtt tgcaaaaact ctcgcgcatt
    13321 catcgccaga taaccaatgc cggaattggc agaaatggtt tcggcaacaa tcagcgtcag
    13381 ccacatcagg cccaacgcaa aacgcacgcc gaccataatt gagggcaggg caccaggcag
    13441 gatcacatgg ataaacagcg gtatgccgga taatccatag ctacgcgcca tctccaccag
    13501 cccgcgatcg atattacgga tgccatgcca ggtgttgata taaatgggaa acagcgtacc
    13561 gagcgccacc agaaagattt ttgcggattc atcaatgcca aaccacaaaa tcaccagcgg
    13621 gatcagcgcc agatgcggca cgttgcgcaa catctgaatt gaggtatcca gcagccgttc
    13681 tccccagcga gatagcccgc taatcagtcc caaaatcaac cccagcgatc cgccaattga
    13741 aaagccaatc agcgcccgct aggaactgat cgccagatgc tgccacagtt cgccgctggc
    13801 ggagagcgtc cagaacgccg tcaccacccc ttccggtgag ggcaaaatac gcgtcgacag
    13861 ccagccaact gaggaggcca gttgccacac cgccacgatg cccaccggta aaaactaggg
    13921 ggcaacgcgc aataaccact tcttcactgg cgttgccatt atttcttcct tagctttgcg
    13981 cgactttacg ggggataaaa tcattcgcca ccgcttcgcc ttgcggattc agcggctgcg
    14041 gctggggaat ttccggaatg gcgacatcca gatgtgggaa cagcaactcg ccgacccgat
    14101 acgcttcttc cagatgcgga tagcccgaaa gcacaaagct gtcgatgcca agcgcggcgt
    14161 attcgttgat tcgcgcagcg accgtaggac catcgcccac cagcgccgtt ccggcaccgc
    14221 cgcgcactaa gccaacgccc gcccataaat tggggctgat ctccagattg tcgcgcttgc
    14281 cgttatgtaa cgccgccatt cgctgttgtc ctacggaatc cgtccgggcg aatgcggcct
    14341 gtgctttggc gatagtttca tcatcaagat gcgagattaa ccgctcggcg gcctgccacg
    14401 cttcgtcgtt agtttcacga acaatcacat gcagacgaat accgaaacga attttgcgtc
    14461 catgcgcggc agctttcgcc cgcacttgtt cgatcttctc ttttactagt tctggcggtt
    14521 cgccccaggt gaggtagaga tcaacttgtt ctgccgccag ctcctgggcg acgtctgacg
    14581 atccgccaaa gtaaagcgga ggataaggct gttgaatcgg cgggaagagc agttttgctc
    14641 cgcgcacatg aatatgttta ccgttgaaat tgacggtttc ccccagcaat aagcgccgcc
    14701 agacctaggt aaattccgcc gaggcttcgt agcgctcgct atgatcaagg aacacgccgt
    14761 cgcctgccag ctcttgtgga tcgctgcctg tgaccagatt aaacaacgca cgaccatttg
    14821 agagacggtc aagcgtggcg gcctggcgag cggcaacggt aggtgaggtt acgctggggc
    14881 gcagggcgac aagaaacttc agccgctgcg tcaccgggat catcgacgcc gccaccagcc
    14941 acgcatcttc acacgatcgc cccgttggga tcagcacacc ggtatagccc agacgatccg
    15001 ccgcttgcgc aatttgttgc agataaccgt gatcaaccgg gcgtgaacct tcttccgttc
    15061 ccagatagtg cccgtcaccg tgggtcggta aaaaccagaa catattcaga ctcataattg
    15121 ttttccttcc agttgagtgg gctgccagat gcgctggcga atatcgactt ttttcggcac
    15181 cagacgattt tcataaaaca gatctgccgt ttgctgctgt aaggcggcaa cctcggcgtt
    15241 aaccggtttg atggtggtag gagggcgatg atctaagtaa gaggcaatca ccggtgccgg
    15301 taagcccatc gtttttgcca gtaaagcgat gctttgctcg cgctggctgc gggttaacgc
    15361 atcggcctca ctaaaggttg ccagtacgcc ctgaataaaa gcgccgtttt tttctgcata
    15421 gggacgagct gccagataaa acgatccagt ttgattgaga tcggtgccgt ctttcagcac
    15481 ccgcacgccg ccctgtaata atgcagcaga gtagtaggga tcccagatag cccaggcgtc
    15541 aacgttacct tgctggaacg cggcgcgggc atcagcgggc gtcaggtaag tgggttggat
    15601 atcggtaaac ttaagtccgg cctgacgcag tgcacgcagt aaaaggttgt gtgaactgga
    15661 acctttctga aaggcaactt tgtgaccttt aagatcggct acggttttga tcgggctgtt
    15721 ttctgccacc agaatcactt cggctttggg cttcggtggc tcgacgccca catataccaa
    15781 atcagccccg gcagcctggg caaagattgg cggaatatcc ccggtactgc cgagatcaat
    15841 actgccaacg tttaaggctt ccaacatttg cggacccgcg gggaactcca cccaggagat
    15901 ttttgattgc ggatagcgtt tttccagtaa ctggtggctt tttgccagta ccataccaat
    15961 actgcctttc tgatagccta tacataacgc ttcaggcgag gattctgcag caaccgcaat
    16021 cgtagagacg ctaagcaatc ccaccagcgc cagtttaatg atgttacgca tgggcattac
    16081 ctcgcagaga cagaaggtca ggaacctgaa catcgcggcg gtgcaatgcc tgccagaaag
    16141 tttctagcgc ggtatcaaga cgggtttgca gatttggcgt gaactggggt ctgtgatggt
    16201 aatcaattac ttgtgagtca tcggcaaaca cgccgtgcag gatctcctga gctttcagtg
    16261 cgcttaaaac tggtttaagg gcataatcga ccgccagcag atgggccacg gtaccgcccg
    16321 tcgccagcgg tagcaccact ttgccttgca aagcgcgctc tggcagcagg tcgagcaggg
    16381 ttttcagcgc gccggaatag gcggctttat acacaggtgt agcgactatc agtccatcag
    16441 cctgttgcag ctgttcggtg aaggtcttga gtgccggact atcgaaacga gcataaagca
    16501 gatcttccgg gacgaagttt tgcagattcc agtgataaac ctctacatcc aggccattta
    16561 gtttttcccg cgcatattcc agcaaggagc tggagcgaga aggaaagcga ggactacccg
    16621 ccagggtgat gacacgcata ctctctcctt ataaccaatt gttctttttt tgttaacatt
    16681 gataacaatt cggtcagtct gtcggagaga caagaaaatg ccaaatataa attttgtgta
    16741 tctttttctg aaaataaact aaagaaaggg ctttatatat cacgcatatt tatttgttgg
    16801 atagtcatta gatgttgaat caatgaatta ctcgttcagt taatatttaa atattcatga
    16861 aatctataaa ttaaagattt gtcacttatt ggatttagta tgcttgattt aaatgacggt
    16921 caattattgt tattattaag tctaatgtca tttaaaggca ttatcatat
//
LOCUS       DADKRT010000091        16919 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.092, whole genome shotgun sequence.
ACCESSION   DADKRT010000091 DADKRT010000000
VERSION     DADKRT010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 16919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16919
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.092"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            87..524
                     /locus_tag="JQ356_002449"
     CDS             87..524
                     /locus_tag="JQ356_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001524956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HAY4622512.1"
                     /translation="MKTIKPESIALFCLLSGDVDLAKHLADILPITCFVGEDWQQDFQ
                     PLDGGPVQSLSDSYSDYSVLLLIAAESEISVPEWLAHSEGTTVILIAEHNARLLTGPA
                     GGAVALIHYLNEICHSRETAVNDAFCRTLTRGSLAIPQCHLLS"
     gene            658..1202
                     /gene="cobU"
                     /locus_tag="JQ356_002450"
                     /pseudo
     CDS             658..1202
                     /gene="cobU"
                     /locus_tag="JQ356_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416497.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
     gene            1199..1942
                     /gene="cobS"
                     /locus_tag="JQ356_002451"
     CDS             1199..1942
                     /gene="cobS"
                     /locus_tag="JQ356_002451"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HAY4622513.1"
                     /translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL
                     GAISGLVFMVLQAWCGVPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLE
                     IMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILALLAAACAVSRGTAALLMYRH
                     RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQL
                     LKRTLGGQTGDTLGAAIELGELVFLLALL"
     gene            1954..3033
                     /gene="cobT"
                     /locus_tag="JQ356_002452"
     CDS             1954..3033
                     /gene="cobT"
                     /locus_tag="JQ356_002452"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HAY4622514.1"
                     /translation="MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAI
                     QLAGMPGLNGVPHVGKKAVLVMCADHGVWEEGGAISPKEVTAIQAENMTRGTTGVCVL
                     AAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHQAEKLLLDVICYT
                     RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVV
                     RRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAAC
                     QMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACA
                     IYNNMGELAASNIVLPGNTTSDLNS"
     gene            3095..4030
                     /gene="ldtA"
                     /locus_tag="JQ356_002453"
     CDS             3095..4030
                     /gene="ldtA"
                     /locus_tag="JQ356_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY4622515.1"
                     /translation="MMRRVNIFCSFALLFASHTSLAVTYPLPPEGSRLVGQSYTVTVP
                     DHNTQPLETFAAQNGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVN
                     VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
                     KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
                     LFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYEFDRKVPLPVTPSLR
                     AFISGQEVDVNRANAALQRRSGMPVPISSGSRQMF"
     gene            complement(4086..4161)
                     /locus_tag="JQ356_002454"
     tRNA            complement(4086..4161)
                     /locus_tag="JQ356_002454"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4126..4128),aa:Asn,seq:gtt)
     gene            4488..4859
                     /locus_tag="JQ356_002455"
                     /pseudo
     CDS             4488..4859
                     /locus_tag="JQ356_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416493.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            4858..5292
                     /locus_tag="JQ356_002456"
                     /pseudo
     CDS             4858..5292
                     /locus_tag="JQ356_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310806.1"
                     /note="Catalyzes the hydrolysis of AMP to form adenine and
                     ribose 5-phosphate using water as the nucleophile;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
     gene            5635..6351
                     /locus_tag="JQ356_002457"
     CDS             5635..6351
                     /locus_tag="JQ356_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY4622516.1"
                     /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
                     TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
                     VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRD
                     VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
     gene            complement(6807..6882)
                     /locus_tag="JQ356_002458"
     tRNA            complement(6807..6882)
                     /locus_tag="JQ356_002458"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6847..6849),aa:Asn,seq:gtt)
     gene            complement(6983..8626)
                     /gene="yeeO"
                     /locus_tag="JQ356_002459"
     CDS             complement(6983..8626)
                     /gene="yeeO"
                     /locus_tag="JQ356_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic metabolite efflux MATE transporter YeeO"
                     /protein_id="HAY4622517.1"
                     /translation="MLRHILTAKNLLSNPIFKFPNCLPFLSTVCCICRQFVGENLCSF
                     ADSPSLFEMWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIF
                     MENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLG
                     KRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKVLALTYLEL
                     TVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFV
                     GAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVE
                     SVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVG
                     QIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALF
                     MPIWSASWGLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMF
                     ADWAVRAVLFYWRMVTGRWLWKYPRSEPQKCEKKPVVSE"
     gene            8631..8706
                     /locus_tag="JQ356_002460"
     tRNA            8631..8706
                     /locus_tag="JQ356_002460"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8664..8666,aa:Asn,seq:gtt)
     gene            8868..10130
                     /locus_tag="JQ356_002461"
     CDS             8868..10130
                     /locus_tag="JQ356_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY4622518.1"
                     /translation="MSLNDSKIRNLKPSSKPVKLSDSHGLYLLVNQGGSRIWYLKYRF
                     SGKESRVSLGAYPLVSLAEARQRRDDIRKLLTQNINPAHQRMSDKAAASPEKYFKAVA
                     LAWHKTNKKWSPDYAARILASMENHIFPAIGHLPVTTLKTQNFTALLRVIEDKGFLEV
                     ASRTRQQLCNIMRYAVQQGFTENNLAQHLEGVTAPPVKNHYPALPLERLPELFERIGD
                     YQQGRQLTRLAVVLTLHLFIRSSELRFARWGEIDFRNKIWTIPATREAIEKVRFSGRG
                     AKMRTPYIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTVNRALRLMGYD
                     TKTDVCGHGFRTMACSALVETELWSRDTVERQMSHQERNSVRAAYIHRAEHLDARTAM
                     MQWWSDYLDVSREGYVAPYIYARRHKAA"
     gene            complement(10842..11726)
                     /locus_tag="JQ356_002462"
     CDS             complement(10842..11726)
                     /locus_tag="JQ356_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY4622519.1"
                     /translation="MGILEQEMKRLAQQAGGSHKTVHDRIKLVQRFCERLVLAQNVQI
                     RRVEQLKARYIEGYVRERLAQGITKRSLQNEMAAVRCILKQAGRDRLAQSERLNNRSL
                     GLSGASRNGTKRAITPEHYRYVLETARAKDPGMAAALELSRLMGLRSQEVVQSAQSLR
                     TWKQSLERGEPRLTVVFGTKGGRPRETVILDAVAIRKALDNALVVAEDRHGRLIDKPD
                     LKSAMKYWHSQASRLGLTGTYSPHSLRYAWAQDAIRHYLAQGFSEKEALAMTAMDLGH
                     GDGRGRYVAQVYGRKDTD"
     gene            complement(12591..12908)
                     /locus_tag="JQ356_002463"
     CDS             complement(12591..12908)
                     /locus_tag="JQ356_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016161430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HAY4622520.1"
                     /translation="MDRGEIWLVSLDPTTGHEQSGKRPVLIVSKASFNTFTRLPVVVP
                     VTSGGNFAREAGFTVSLDGAGTKTTGVIRCDQPRTIDMGARSGKRLERIPDAVVNEVL
                     ARL"
     gene            complement(12909..13165)
                     /locus_tag="JQ356_002464"
                     /pseudo
     CDS             complement(12909..13165)
                     /locus_tag="JQ356_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288814.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
     gene            complement(13514..13720)
                     /locus_tag="JQ356_002465"
     CDS             complement(13514..13720)
                     /locus_tag="JQ356_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003842122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY4622521.1"
                     /translation="MMLQDWHPADIIAGLKKRGTSLSALSRQAGLASSTLANALTRRW
                     PKGERLIAEALGIKPEQIWPSRYR"
     gene            complement(13717..14178)
                     /locus_tag="JQ356_002466"
     CDS             complement(13717..14178)
                     /locus_tag="JQ356_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012822469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622522.1"
                     /translation="MATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVL
                     RLALCGRLAACLTLLQPTLNDPIPSHLTDSLTVDALPADMPRFVPDAELLCDYSLTLA
                     QLLIGQGMQPKVEQTITGLLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA"
     gene            complement(14549..16153)
                     /locus_tag="JQ356_002467"
     CDS             complement(14549..16153)
                     /locus_tag="JQ356_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622523.1"
                     /translation="MITKELVDESNFISQLVDIGRFDESYQQSVAFLNKLERITIRND
                     NYFIVLANIAGALVDIGQMQNNKNASELGCNLMEDNKEAFISVLGECLYYYNYGNALS
                     NLVSITNPNDHTFKSIEELVSLKNIYWRSFKLSAEEQEEFQAELSVNLANSLRSQFRL
                     SESLRYYDLTNLKGLDIPQAWVNRSMSLMVLNLISSSFSIKLLKEVRAGYIKASVSKN
                     IPPQWESFYLERIAQTNEKIAEYAVDDETDEHDEALTQQEFEVLSPYRQFCLRNHLTL
                     SEHGLYCPCVGSATDDLVIASRGGVTGDFIIPMEMVLNRLKSEFSLARHLYFDYLHPQ
                     NTDYIKYESHFLELYNDEVLGIEIEKIRTAFRLCFGILDKIAVAICELYNLYPTTKKG
                     TPQKNIYFQNFWQLDVDNRRQLFEKVKSPGLLALYSIATDLNKDKGGELAFYKEWRNG
                     LEHKFLVVHKSDKPEDIYESYQLIEDILFIKESDFIHHFEHLLQITRSAIFSFAFMVR
                     QEGMKEKKEGIHYMTRELHAINYSAD"
     gene            complement(16166..16531)
                     /locus_tag="JQ356_002468"
     CDS             complement(16166..16531)
                     /locus_tag="JQ356_002468"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622524.1"
                     /translation="MVSDKRADIIVSLPQIKIPIEIKRDYHRDVWTALNGQLDKLYTK
                     NPDAAGHGIYLVFWFGSARPNSLPHLAKNTSQPENASAMENMLNETVPVDKRDRLSAI
                     VIDVSCEGIPPVEAPKSSV"
     gene            complement(16559..16768)
                     /locus_tag="JQ356_002469"
     CDS             complement(16559..16768)
                     /locus_tag="JQ356_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001044500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622525.1"
                     /translation="MNKTPANIMDLYSLLLDHIRDISNRIANENTDIYKQFWNEDSYG
                     RTLTPKPEESCRNIFLDLLRVRLNP"
BASE COUNT         4461 a         3991 c         4061 g         4406 t
ORIGIN      
        1 agggctgcat tcaaggtgtg gcaatattgt ttcatggctt atcaaccaga gcgccattac
       61 aggaaattaa gtggagggcg agaggcatga aaacgataaa acccgaatcg atagctcttt
      121 tttgcctctt atctggagat gtggatctgg cgaaacatct ggctgatata ttgccaataa
      181 cctgttttgt tggtgaggac tggcagcaag atttccagcc tcttgatggt gggcctgtgc
      241 aatcgttatc agattcgtat agcgattatt cagtgctgct attgatagca gctgaaagcg
      301 agatatccgt accagaatgg ctcgctcatt ctgagggaac gacggtaatt ttgattgcag
      361 aacacaatgc ccgtttgctg actggtccgg ctggtggggc tgtagcatta atccattatc
      421 tgaatgaaat ctgtcattcc agagaaaccg ctgtcaatga cgcattttgt cggacgttaa
      481 cacgaggaag tctggctatt ccgcaatgcc atcttctttc gtaatggatt gagaatgctg
      541 gatttttaat tatattacgc gcagtattaa tcgcgtaaat gttttgcggt cagcaacggt
      601 gggggatcca ttgttctgtt caatgaatac catcatacaa ttgaatcagg agtcggtatg
      661 atgatttcgg tgacgggggg catacggagc gggaagagtc gccacgcaga ggcgcttatt
      721 ggggactctt cacaggttct gtatacgcca cctcgcaaat ccttgatgat gagatggctg
      781 cacggataga acatcatcgg caaggccgcc cgacgcactg gcacacagtg gagcgctggc
      841 aacatcttga tgaattaatt catgcagaca ttaacccgca tgaggctgta ttgctggaat
      901 gcgttaccac catggtgact aatctgttgt ttgattatgg cggcgataaa gaccctgatg
      961 aatgggatta tcaggcgatg gaacaggcga ttaatgctga gattcagtcg ttgattgctg
     1021 cctgccaacg ttgtcccgca aaggttgtat tagtgactaa cgaagtggga atggggattg
     1081 tgccggagag tcgtctggca cgacattttc gtgatattgc cgggcgggta aatcagcagc
     1141 tggccgctgc ggcaaatgaa gtatggttgg tggtttcggg tattggagta aaaatcaaat
     1201 gagtaaatta ttttgggcga tgctctcttt tattacgcgt ctgcctgtac cgcgtcgctg
     1261 gtcccaggga ctggatttcg agcattattc tcgcggtatt attacttttc ctttaattgg
     1321 attattgctt ggcgcgatta gcgggctggt cttcatggtg ctgcaggcat ggtgtggcgt
     1381 accactggcg gcactgttta gcgtacttgt gctggcgctg atgaccgggg gattccacct
     1441 ggacggcctc gccgatacct gtgatggcgt attttctgca cgtagccgcg atcgcatgtt
     1501 ggaaatcatg cgtgatagcc gtttaggcac ccacggcggt ctggcattga tttttgttgt
     1561 actggcaaag attctggtat taagcgagtt ggctctgcgt ggcgaaccga tccttgcatt
     1621 gctggcggca gcatgtgcgg tcagccgcgg gactgccgca ttattgatgt atcgtcatcg
     1681 ttatgcccgg gaagaaggac ttggcaatgt gttcattggc aaaattgatg ggcgacaaac
     1741 ctgcgtcaca ctcggcttag ccgctatttt tgctgccgta ttattgccgg gtatgcatgg
     1801 tgtggctgct atggtggtga cgatggtggc gattttcatc ctcggtcagc ttctcaaacg
     1861 tacgctgggc gggcaaaccg gcgatacgct gggagctgct atagagcttg gtgaactggt
     1921 cttcctgctg gcactgctat aaagagacgt gacattcaaa cacttgccga tttactgaat
     1981 acgatccctg ctatcgatcc tgccgctatg tcgcgtgcac aacggcatat cgacgggtta
     2041 ctcaaacctg ttggtagcct gggaaggctg gaggcgcttg ccatacaact ggcaggaatg
     2101 ccggggttga atggcgttcc gcatgtgggc aaaaaagcgg tactggtcat gtgtgccgat
     2161 cacggcgtct gggaggaagg gggcgctatt tccccaaaag aagtgacagc cattcaggct
     2221 gaaaatatga cccgcggaac aaccggcgtg tgtgtgctgg cagcacaagc gggcgctaac
     2281 gtctacgtaa ttgatgttgg tattgatact gctgagccta tccccgggct tatcaacatg
     2341 cgtgttgctc gaggtagtgg caatattgct tcagctccgg caatgagtcg ccatcaggca
     2401 gaaaagttgc ttttggacgt catatgttat acgcgggagc tggcaaaaaa cggtgttacg
     2461 ctgtttggtg taggtgaact ggggatggca aacacgacac cggcagcggc aatagtcagc
     2521 acaatcactg gccgggctcc tgaagaagtg gttgggattg gcgcaaacct gccgacagat
     2581 aaactggcta ataaaattga tgttgtgcgc cgggcgatta cgttgaatca accaaatccg
     2641 caggatggcg ttgatgtcct ggcaaaagtg ggtggatttg atttggtcgg aatggctggc
     2701 gtgatgttag gcgctgcgtc ctgcggttta cccgtgttgc tggatggatt tctttcttat
     2761 gctgctgcgc tcgcagcctg tcagatgtct cctgcaatca aaccgtatct cattccttct
     2821 cacctgtcgg cagaaaaagg agcgcgtata gcgctgtcgc atttggggct ggagccttat
     2881 ctcaatatgg agatgcgttt aggtgagggg agtggcgcag ctctggcgat gcccatcatc
     2941 gaagctgcct gtgcgatata taacaacatg ggcgaacttg ctgccagtaa tattgttcta
     3001 ccggggaata cgacttctga tttgaacagt taaaaacgaa aagtctgata aaagctatac
     3061 ttaacggata gctttcgcga cttaggaaag ggacatgatg cgtcgtgtaa atattttttg
     3121 ctcatttgct ctgctttttg ccagccatac tagcctggcg gtaacttacc cattacctcc
     3181 agagggtagc cgtttagtgg ggcagtcgta tactgtaact gttcctgatc acaataccca
     3241 gccgctggag acttttgccg cacaaaacgg gcaagggtta agtaacatgc tggaagcgaa
     3301 cccgggtgct gatgttttct tgccgaagtc cggctcgcaa ctcaccattc cgcagcaact
     3361 gattttgccc gccactgttc gtaaagggat tgtggttaac gtcgctgaga tgcgtcttta
     3421 ttactaccca ccagacagta atactgtgga agtctttcct attggtatcg gccaggctgg
     3481 gcgagaaacc ccgcgtaact gggtgactac cgttgaacgt aaacaagaag ctccaacctg
     3541 gacgccaacg ccgaacactc ggcgcgaata tgcgaaacga ggggagagtt tgcccgcatt
     3601 tgttcctgcg ggccccgata atcccatggg gctgtacgcg atttatattg gcaggttgta
     3661 tgccatccat ggtaccaatg ccaattttgg tattgggcta cgggtaagtc agggctgtat
     3721 tcgtctgcgc aatgacgata tcaaatatct gtttgataat gttcctgttg ggacgcgtgt
     3781 gcaaattatc gaccagccag taaaatacac cactgaacca gatggctcga actggctgga
     3841 agttcatgag ccgttgtcgc gcaatcgtgc agaatatgag tttgaccgaa aagtgccatt
     3901 gccggtaacc ccatctttgc gggcgtttat cagcgggcaa gaagttgatg taaatcgcgc
     3961 aaatgctgcg ttgcaacgtc gatcgggaat gcctgtgcca attagttctg gttcaagaca
     4021 gatgttttaa gagcgttggt aattagaaag caaaaagcct gctagaaagc aggctttttt
     4081 gaatttggct cctctgactg gactcgaacc agtgacatac ggattaacag tccgccgttc
     4141 taccgactga actacagagg aatcgtgtga acggggcgca tattaatggc agtgcatggt
     4201 gatgtcaaag ggtgaaatgc atttttttgt ttgtttgctg tcaatttcaa caaagtggtg
     4261 agctttcaat cttattgggt aatgaaccat cgtggtgcat accctccttt tatagggcag
     4321 gggaacgcga cagctgatta aaggagcaaa tgacgaatct atcataatct cttatttgac
     4381 agttggttag cttgtacatc aacgccaaaa taaaactggc aagcatcttg caatctggtt
     4441 gtaagtaatg gcggcacttg ggccgattct taaaaaccgg aggcaacatg aacttcagac
     4501 gcctgaaata cttcgtaaaa attgtagata ttggtagcct gacccaggct gctgaagtat
     4561 tgcatatcgc acaaccagcg ctcagccagc aggttgccac actggaaggt gagttaaatc
     4621 aacaactttt gatccgtaca aagcggggcg ttacgccaac agacgccgga aaaattctct
     4681 atacccatgc gcgggccatt ttacgtcagt gtgaacaggc ccaactggcg gtgcataacg
     4741 ttggtcaggc attatcgggg caagtctcga ttggctttgc accaggaacc gctgcgtcat
     4801 ccatcaccat gcccttatta caggcggttc gcgctgaatt tccggagatc gttatctatc
     4861 ccgagcattg ctgaagtgca acgtgcgctt tatgacgcca ccaagctggt gagcggcagg
     4921 cccggtgagg aagtcaaaca gcggctacgt actggtactg tggtaaccac agatgacagg
     4981 aactgggaat tacgttactc agcttctgca cttcgtttta acttaagccg ggccgtagca
     5041 attgatatgg aaagtgcaac cattgccgcg caaggatatc gtttccgcgt gccatacggg
     5101 acactactgt gtgtttcaga taaaccgttg catggcgaga ttaaacttcc cggccaggct
     5161 aaccgttttt atgaaggcgc tatttccgaa catctgcaaa ttggcattcg ggcgatcgat
     5221 ttgctgcgcg cagaaggcga ccgactgcat tcgcgtaaat tacgaacctt taatgagccg
     5281 ccgttccgat aataagttct gaaccttctt atcagaaata gatgtgaagg agtaagtaag
     5341 acacctggca aatagcctgc aataatcgtg ggctgtttgc ttccttgggc ggatacgtgt
     5401 tttattatcg tcttaatgat ttccacatat taaaagcaag tatgctttca aaacacaatt
     5461 ataaaaaatc ccgccaacaa tataagtttt tataaaatta aatataagat tatggcttta
     5521 gaatattttt atttctaata gacgagattt ttcctgttat gatataatat gccgaattaa
     5581 cacatgttaa cgatttacca gtaatgtaaa taaattttcg aggagatcat tccagtggga
     5641 cgtaaatggg ccaatattgt tgctaaaaaa acggctaaag acggtgcaac gtctaaaatt
     5701 tatgcaaaat tcggtgtaga aatctatgct gctgctaaac aaggtgaacc cgatccagaa
     5761 ttaaacacat ctttaaaatt cgttattgaa cgtgcaaagc aggcacaagt tccaaagcac
     5821 gttattgata aagcaattga taaagccaaa ggcggcggag atgaaacgtt cgtgcaggga
     5881 cgttatgaag gctttggtcc taatggctca atgattatcg ccgagacatt gacttcaaat
     5941 gttaaccgta cgattgctaa cgttcgcaca attttcaata aaaaaggcgg caatatcgga
     6001 gcggcaggtt ctgtcagcta tatgtttgac aatactggtg tgattgtatt taaaggatca
     6061 gaccctgacc atatttttga aattttactt gaagctgaag ttgatgttcg tgatgtgact
     6121 gaagaagaag gtaacattgt tatttatacc gaacctactg accttcataa aggaatcgcg
     6181 gctctaaaag cagctggaat cactgagttc tcaacaacag aattagaaat gattgctcaa
     6241 tctgaagttg agctttcccc agaagattta gaaatctttg aagggcttgt tgatgccctt
     6301 gaagatgacg acgatgtaca aaaagtttat cataacgtcg caaatctcta attatatatt
     6361 aaagaaatct gtctttatgg cagatttctt taatctcata taatccttat aaaaaatata
     6421 atgttcaact cgtcatattg cttataaaaa atcctcgttc ccagagaaat aatatttatt
     6481 ataattccag ttcttctttt tctgattaca gaaggcaaag tgacaattac gcatagtttc
     6541 ccgataaaga cgcgacagct acatcccgca taaggcattt ttctctttat ccttgtacgg
     6601 tacttcatgg aacagagttt ttgaccttgc gaatcgtgat gtctgttggg gaggggcaat
     6661 ttgctcactg aagcgtgaga ctcgattaag cgcacgaaac acagaaatca aaaaacccgg
     6721 gcactttttt acaaggtaac cgggtaaaaa taatttttat tttttaactg ttttgagact
     6781 catagagatg tctcaaaact aaaatttggc tcctctgact ggacttgaac cagtgacata
     6841 cggattaaca gtccgccgtt ctaccgactg aactacagag gaatcgtgag aacgaggcga
     6901 atattagcga tgcccaccca caatgtcaaa gcctgttatt taaatttgaa atcgtttgct
     6961 gaaataatct gcattttgtc gtttattccg acacaactgg ctttttttca cacttttgcg
     7021 gttcggatcg agggtatttc cacagccaac gtccagtaac cattcgccag taaaacagca
     7081 cggcccgcac agcccagtcg gcaaacattc ccatccagac accaaccaca ccccagccaa
     7141 gcatgatgcc cagcacataa ccgacgacaa cccggcaacc ccacatgctc aacatagaaa
     7201 cccacatggc gtaacgggca tcgcgagcac ctttaaatcc agcgggtagc ccccatgagg
     7261 cggaccaaat aggcataaat aaagcattta gccaaatcag aatcacaacg acatgtttaa
     7321 cctgtggatc ctgggtgtaa aacgatgcca taaccccggc aaagggagcc gttagccagg
     7381 cgatggccgt taatccaaga gtggaaagcc agaacacatg ccgcaactga atctctgctt
     7441 gcgctatctg ccctaccccc aaccttcggc ctgtaatgat cgtagaagca gagccgagcg
     7501 cacttccggg taagttgata agagccgcaa ttgaaaacgc gataaaattt ccggcaataa
     7561 cactggtccc catcccggca acgaacattt gggttaataa ccgaccactg gtaaataaca
     7621 ctgattcgac actcgcggga ataccaatcc ccatgacttc ccagataatg ctaaaattca
     7681 gcggtttaaa atagctcttt aacgaaatcc ttagcgcagg attaaaacca atcgccagca
     7741 cccacaaaat tgcaactgcg ccaatataac gagaaatggt taaacccagc cctgccccga
     7801 caaatcccag tcccggccag gagaaaaggc cgtaaatcaa tatgccgcta ataataatat
     7861 taagaatatt caggctaccg ttaatcaata gcggtatttt cgtattccct gcaccacgaa
     7921 gtgccccgct accaataaga gtgatggcag ctgctggata actgagtacc gtcagctcca
     7981 gataagtcaa cgccagtact ttaacttctg tcgtggcatc acccgcgacg aaatcaataa
     8041 tttgttcgcc aaaatgatga ataagcgttg ccaacagtac ggcaaacaac gtcatgatca
     8101 ccaatgactg ccgcgtcgcc accctcgctc gtcgtcgatc ccgcttaccg agactaaatg
     8161 ccacaacgac agtagtacca agatcgatag cagcaaaaaa agccataatg accatattga
     8221 agctgtccgc caatcccacg ccggccatcg catcttttcc cagccagctg accagaaaag
     8281 tgctcagaac ccccatcaac aggacacagg cattctccat gaagatagga acagcaagcg
     8341 gggttatctc gcgccagaac aacactttgt agctcttgcg tttagcgtgc cagcgagtgc
     8401 cgtgaacaac ctggcgtaaa gcagaggaga tattcaaagc cgaccttaat tgcagaaagt
     8461 gaaaccacat ttcaaataat gagggagaat cagcaaagct gcaaagattt tcgccaacaa
     8521 attgtctgca aatgcaacaa actgttgata gaaacggcaa acagttgggg aatttaaaaa
     8581 tcgggtttga caaaagattt ttcgccgtta agatgtgcct caacagcgat tcctctgtag
     8641 ttcagtcggt agaacggcgg actgttaatc cgtatgtcac tggttcgagt ccagtcagag
     8701 gagccaaatt ccgattctta cgctatctta ttagtcctta tttgatattg attcaataag
     8761 ttagcgtgaa aatctttcca gatgtgtatt cagttttccc tccgcatccg gttaatttgg
     8821 tggtcagatt tgggggcagg ttggttcgat tctggagtga cccccaaatg tctttaaacg
     8881 attcaaaaat ccgtaactta aaaccctctt caaaacccgt aaaactgtct gattcgcacg
     8941 gtctgtatct gctggtcaat cagggcggtt cgcgtatctg gtatctcaag tatcgcttca
     9001 gtggtaaaga gtcccgcgtc agtctgggcg catatcctct ggtttcactt gctgaagcaa
     9061 gacaacgacg tgacgatatc cgtaagctac tgacgcagaa tattaacccc gcccaccagc
     9121 gcatgtctga taaagccgca gcgtcaccgg aaaagtattt taaagccgtg gcgcttgcat
     9181 ggcacaaaac caacaaaaaa tggtcgcctg attatgccgc gcgcatcctc gccagcatgg
     9241 aaaatcatat ctttccggcg attggtcatc tgcctgtcac tacgctgaaa acgcagaatt
     9301 tcactgcgtt actgcgggtt attgaggata aaggttttct ggaagtcgcg tcccgaaccc
     9361 ggcagcaact ctgcaacatc atgcgttacg ccgtacagca gggattcacc gaaaacaacc
     9421 tggcgcagca tctggaaggc gtcaccgcgc cgccggttaa gaatcactat cccgccctgc
     9481 cgctggagcg gttgcccgaa ttgtttgagc gcattggcga ctatcagcag ggacggcagc
     9541 ttacgaggct ggcggtggtg ttgactctcc acctgtttat ccgttccagc gagctgcgct
     9601 ttgcccgctg gggtgagata gatttcagaa acaaaatctg gaccatcccc gccacaaggg
     9661 aagcgattga gaaagtccgt ttctctggcc gtggcgcaaa aatgcgtact ccatatatag
     9721 tgccgctttc tcgtcaggct atcgccattc tgaagcagat aaaggaaatc tccggccatc
     9781 tggaactggt gttccccggc gaccataacc cgtataagcc gatgagcgaa aacactgtca
     9841 accgggcgtt gcgtcttatg ggctatgata ccaaaactga tgtctgtggg catggattcc
     9901 ggacaatggc gtgtagcgca ttagtggaaa ctgaactctg gtcacgggat accgtggagc
     9961 ggcagatgag tcatcaggag cgcaacagcg ttcgggcagc gtatatccac cgggctgaac
    10021 atctcgacgc ccgtacagcc atgatgcagt ggtggtcgga ttatctggat gtaagtcgcg
    10081 aggggtacgt tgcgccgtat atttatgcgc ggcggcataa ggcggcctga gacagtggct
    10141 atataatttg ttaaaaatga aaaagcagat cctgattgaa tccggatctg ctttttacat
    10201 taggcaatcg ctgccagaca atctgcacca gaaacgccat aactgcacca gttcagtacc
    10261 accgcttacc tgcgccagtc tgccgtcgcc tgtctgtgtc aggactgcgc cagatcttat
    10321 cgaataaaca tcaaactgcg ccagtgttac ggccctttca gccctttggc cttttccggt
    10381 ctggcgctgt tacccttagc cgccccttac cctttccggc ctttttcctt tgctggcgca
    10441 atcgccagaa aaatcgtcaa gctgcaccag aagcctgcca ataggtcata ccgttcagaa
    10501 gcatcgttat tgagaggaaa ccgtacaaaa aatttctacg tagaaatttt ttcggtggat
    10561 aacgatgaat aaagagtatt ttataatgtg atggctatca aaaatcgacc atccaaaaat
    10621 aattcattga tttataatga ataaccatga atttaatagt cgatgattat tgtttttatc
    10681 agtattgata ggaaagtata caaaaaattt tggccccaaa attttttgta cgaaaaccga
    10741 tgaataacgc gaaattaata ggaaaccatc caaaattatt tggggcaaat aattttgccc
    10801 gaaaaccgat ggataactcg atcttttcaa agcaacggct atcaatcagt atcctttctt
    10861 ccgtaaacct gcgccacata ccgcccgcgc ccgtcgccgt gtcccaaatc catcgccgtc
    10921 attgccagcg cttctttctc actgaatccc tgcgccagat aatgacgaat ggcatcctgc
    10981 gcccacgcat agcgcaacga gtgcggggaa tatgtgccag ttaacccgag acgtgacgcc
    11041 tggctgtgcc agtatttcat cgcgcttttc aggtcgggtt tatctatcag cctgccgtgg
    11101 cgatcttctg ccacaaccaa cgcattatcc agcgcttttc tgatagcgac agcatccaga
    11161 ataacggttt ctcgcggacg cccgcctttg gtgccgaaca ccacggttaa acggggctca
    11221 ccccgctcca gcgattgctt ccacgttctt aatgactgcg cactttgcac cacctcctgc
    11281 gaacgtaatc ccatcagcct tgagagttcc agcgccgctg ccatccccgg atcttttgcg
    11341 cgggcggttt ccagcacata gcggtaatgc tccggcgtga tggcccgctt cgtaccgtta
    11401 cgggatgcgc cagacaggcc cagcgagcgg ttattcagtc gctcactctg cgccagcctg
    11461 tcacgcccgg cctgtttcag aatgcagcgc accgccgcca tctcattttg cagggaacgc
    11521 ttcgtgatac cctgcgccag tcgttcacga acatatccct caatataccg cgccttaagc
    11581 tgctccaccc ggcggatctg cacattctgt gccagaacca gacgctcaca aaaccgctgc
    11641 accagcttaa tacggtcgtg aacggtctta tggctgccgc ccgcctgttg tgccaatcgc
    11701 ttcatttcct gctccagaat ccccatacat tccccctttc atgattgccg caaactcatc
    11761 cccaaaaact caacactgat acagcgttcc ccggcgcaca ggccgatagc ccctgagttt
    11821 tgtcggggct gcgaacgata cctgagcgcc ggggcggcag ccgttgaggt gtggtggggc
    11881 ttcggttgtg ctctcagagc agccgcccgc ttgcgcgggt catcccccgg atcgtccaga
    11941 tccgcctcgg tatcggttca tattctcctt atgggtaaat ggcctaaaaa ggcggtgtca
    12001 gaatccagcc atgagctggc gcagttgagt tttctggtgc aggtcgaaag ggcttgcgtg
    12061 cgtcactttc ccgctttgcg cggttaaagt gacgcacgga tctggtgcag catctgagat
    12121 ttatcgtctg gtgcagtttt acggtcacgc ggcagcaaag cctgacggca atgcaggccg
    12181 cagcccgtaa ggtaaaaggc gctgagggtg tcagcagatg caggttagcc gggagaattc
    12241 cggcgcggtg cagattcaga ccagcaggct ggcgaagtaa aaggatgtat cgtattaaaa
    12301 ctctggcctc cgtcgcgatg ttctgcgacc cggtgtttgc agaggtctgc accggtaaac
    12361 ggatcgaccg tcctgataac aggcgcttct ttcaggttgt gaagcgttgg gcgctgtcta
    12421 cgacagcata gagcaagggg gagactacgc ctgtgccgct ggcgcggaaa ggagaaactg
    12481 tttttacctg caaaaggatt ttttaatcac ttgttgttat aaaaaatgag ggcgctgtat
    12541 gtgacagcgc cctcgttcag gttacataaa aaatatcagc tcagaatagc ttacagtcga
    12601 gccagcacct cattcacgac agcatcgggt atacgttcca gccgcttacc gctccgagct
    12661 cccatatcaa tggttctggg ctggtcgcag cgaataacgc ccgttgtttt tgttcccgcc
    12721 ccgtccagtg aaacggtaaa accggcttcg cgggcaaagt ttccgccgct ggtgacaggg
    12781 acaacaacag gcaaccgggt gaacgtgtta aacgatgcct tcgatacgat gagtaccgga
    12841 cgttttccac tttgttcatg gccagtggtg ggatccagtg aaacgagcca gatttctcct
    12901 ctgtccatct acaggatctc cttgcccacc gcaggcgcat caatccattc ccgaccctct
    12961 tcgcttattt cagcgtgcgg atcgcactgc gccaacagtt cttcgagcga atagcgggga
    13021 cgtttttgag gttcaataat caggcagcca ttatcaatgg tcatgcccac ttcgctgtcc
    13081 gtcgacagcc ctagcgtttt cagcactgcg gggggaaccg ccagcatgac gatccgccaa
    13141 cctttttcag gcgagtggta tacatagagc acctccggat attatatttt aatataacat
    13201 ccatgataga cgatgcacaa ctattcatca gattcattgt ggtttcctta gtgtaataaa
    13261 gcgtgaagaa agccttaatc catcggaaga cagatccggc agttttcaaa ggcgacattg
    13321 ccggtaaaag ggcaaccgtc ctgatacatc aggcgcttct ttcaggtcat gaagcatttc
    13381 gtacaggcgg gagcttagtg cgtaacaaag aaggccgata ataggaaact gcttttgcag
    13441 ttcaaaggat tatgacggtt cggataaaca aaatgcggcg cagcttccgt atccgggctg
    13501 cgccgcagga acatcagcgg tagcgcgaag gccagatttg ctcaggcttg atgcctaacg
    13561 cttcggcaat taacctttcg cctttgggcc agcggcgggt aagcgcatta gccagcgtgg
    13621 aggacgccag acctgcctga cgcgaaagcg ctgacagcga agtgcctcgt tttttcagcc
    13681 cggcgataat gtcggcagga tgccagtcct gcagcatcat gcagccacct cgtcgataaa
    13741 cttcacgcca tcggcggtgc ggagccagcg cggggctttc atttcggcgg caaaatacca
    13801 gaccagttca cataataagc ctgttatcgt ctgctccact tttggctgca tcccctgccc
    13861 gataagaagt tgcgccagcg tcagtgagta atcacaaagt aattctgcgt cggggacaaa
    13921 tcggggcata tcggcaggta gagcatcaac ggtcaggctg tcagtcagat gagacgggat
    13981 ggggtcgttc agcgtgggtt gcagcaaagt gagacaggcg gcaagtcgcc cgcaaagcgc
    14041 cagccgcagc accggatctt cgctttcgat cagggtttcg gcgacgtttt cgcagtggtc
    14101 tgccagtacg gtaaaatctg tggcagcact gaagggaaca gcaagtaacg ggtgtgtctg
    14161 agtggggatc gtagccataa aggcagcctc cagtatgtgg tttgaaaacc accaccagag
    14221 gttccaatct catgggtggt ggactgaacg aggttggaac taccggccat actggaaccg
    14281 gcgcacctta cggtgccccc gcccagccca ccataatttt ggtgtagcta agcgcgcgac
    14341 ataaaaaaag acgcagacgc gtcacgtgtc gccagtatgg ttatatttcg gggttccaat
    14401 cccggcacct gattttgcag gtgcgggtaa aagataccgc tttcggttga aaacggcaag
    14461 gggaagtcgt ggaatagaga tcgcagattg ttataaatat acacaatagt taatgttaac
    14521 aaagacggca catatattaa ctttactctc aatctgctga atagtttatc gcatgtaatt
    14581 ctcgggtcat atagtggata ccctccttct tttctttcat cccctcttgc ctcaccataa
    14641 aagcaaacga aaaaattgct gaacgagtta tctgaagtaa atgctcaaaa tggtgaataa
    14701 aatcactttc tttgataaaa agaatatctt ctattagttg ataagattcg taaatgtcct
    14761 caggtttatc acttttatgt acaactaaaa acttatgctc taaaccattg cgccattctt
    14821 tatagaaagc caactcccca cccttatctt tattcaggtc ggtagcaata ctgtacagcg
    14881 ccagaagccc tggtgatttt accttttcaa ataattgtct tctgttatca acatctaact
    14941 gccagaaatt ctgaaaatag atattcttct gaggtgtacc tttttttgtt gttgggtaaa
    15001 gattataaag ttcacatatg gctaccgcaa ttttatcaag aataccaaag caaagacgaa
    15061 atgccgtcct gattttttca atttctattc ctaaaacttc atcattatac aattccagaa
    15121 aatggctttc gtacttaatg taatccgtat tttgtggatg aagataatca aaataaagat
    15181 ggcgtgcgag tgaaaactcc gatttaaggc gatttaatac catctccatg ggaatgataa
    15241 aatcacctgt tacaccgcct cgcgaagcaa tcacaagatc atctgtagca ctccctacac
    15301 atgggcaata caggccatgt tctgataaag tcagatgatt tctaagacaa aactgtcgat
    15361 atgggcttaa cacttcgaac tcttgttgtg taagtgcttc atcgtgttcg tcagtttcat
    15421 catcaacagc atattctgcg attttctcgt tagtctgcgc tatgcgttct aaatagaacg
    15481 attcccattg tggtgggata ttttttgata cagacgcttt aatatatcct gctctcactt
    15541 cttttagtaa cttgattgaa aatgaagatg aaataagatt gaggaccata agtgacatcg
    15601 aacggttgac ccaagcctgt ggtatatcta atcccttaag attggtaaga tcataatatc
    15661 tcaatgactc actgagccga aattgacttc ttaatgaatt agccaaatta acagatagtt
    15721 cagcctgaaa ttcctcctgc tcctcagcag atagcttaaa agaacgccag tagatatttt
    15781 ttaaggaaac caattcttct atcgatttga atgtatggtc attggggtta gtaatgctca
    15841 ccagattaga tagcgcatta ccatagttat aatagtaaag gcactctcct aacactgata
    15901 taaatgcttc tttgttatct tccatcaggt tgcaaccaag ctctgacgca tttttattat
    15961 tttgcatctg cccgatgtca acaagagcac ccgcaatgtt cgccaatact ataaagtagt
    16021 tatcgttcct gattgttatt ctttccagtt tgttcaggaa cgcaactgac tgttgataag
    16081 attcgtcaaa tcttccaata tcaaccagtt ggctaatgaa attactttca tcgacaagtt
    16141 cttttgttat caaaataaat tttccttata cagaggattt cggtgcttca acaggaggta
    16201 tgccctcaca ggagacatct ataactatcg ctgataagcg gtctctttta tcaaccggca
    16261 cagtttcatt aagcatattt tccattgcac tggcgttttc aggttgagat gtatttttcg
    16321 ccaaatgagg cagggaattc ggtcgagcag aaccaaacca aaaaaccaga tagataccgt
    16381 gaccagcagc atcggggttt ttagtataaa gcttgtccaa ttgcccatta agtgcagtcc
    16441 agacatcacg atgataatca cgctttatct cgataggtat ttttatctgc ggtagtgaaa
    16501 caatgatatc tgccctttta tcagaaacca tgtgtccttc tggttcacag cttatttttt
    16561 atggattaag ccggacacgg agtaaatcca gaaaaatatt acggcaactc tcttcaggtt
    16621 taggcgttag ggtacggcca tagctgtctt cattccagaa ttgcttataa atatcggtat
    16681 tttcattggc aattcggtta gaaatatccc gtatatgatc aagcaataat gagtaaagat
    16741 ccattatgtt ggcaggcgtt ttattcatca atgtacttac agtctgcttc cagtcggcat
    16801 gatggaactg tgattctcta taacgaattt tctgattgct ttgggcatgt gagagatgat
    16861 cccgataact ttcacattca ggcagcagta ataagcgctc aagtacttca ctagcatcg
//
LOCUS       DADKRT010000092        16519 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.093, whole genome shotgun sequence.
ACCESSION   DADKRT010000092 DADKRT010000000
VERSION     DADKRT010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 16519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16519
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.093"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            93..2321
                     /gene="crfC"
                     /locus_tag="JQ356_002470"
     CDS             93..2321
                     /gene="crfC"
                     /locus_tag="JQ356_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clamp-binding protein CrfC"
                     /protein_id="HAY4622526.1"
                     /translation="MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAAQLAL
                     PWSQPNIAERYAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPM
                     TALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
                     MQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVE
                     FVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISD
                     EEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVS
                     SMWGYLANRARYELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQ
                     LWEDSLFAQPIQALLHAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACEQ
                     LRQNIHQVEESLQLLQLNQAQVSGEIKHEIELALTSANHFLRQQQDALNAQLAALFQD
                     DSEPLSEIRTCCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQVKMELS
                     ESGFRPGFHFPVFHGVVPHVNTRQLFSEVISRQEATDEQSTRLGVVRETFSRWLNQPD
                     WGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFAS
                     CLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHGWIYTDAQLLRDDIQTLFTAE
                     RY"
     gene            2318..3201
                     /locus_tag="JQ356_002471"
                     /pseudo
     CDS             2318..3201
                     /locus_tag="JQ356_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418534.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3465..4967
                     /gene="proP"
                     /locus_tag="JQ356_002472"
     CDS             3465..4967
                     /gene="proP"
                     /locus_tag="JQ356_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709830.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HAY4622527.1"
                     /translation="MLKRKKVKPITLRDVTIINDSKLRKAITAASLGNAMEWFDFGVY
                     GFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT
                     IVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRK
                     RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR
                     HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKYWRSLLTCIGLVIATNVTYY
                     MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVA
                     LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA
                     FNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGAT
                     PAASDIQEAKEILVEHYDNIEQKIDNIDHEIADLQAKRTRLVQQHPRIDE"
     gene            5033..5170
                     /gene="pmrR"
                     /locus_tag="JQ356_002473"
     CDS             5033..5170
                     /gene="pmrR"
                     /locus_tag="JQ356_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxT activity modulator PmrR"
                     /protein_id="HAY4622528.1"
                     /translation="MSDAHTLLQVNGGECNEKPCLYESLTTVFSVLVVSSFLYIWFAT
                     F"
     gene            complement(5146..6246)
                     /gene="pmrB"
                     /locus_tag="JQ356_002474"
     CDS             complement(5146..6246)
                     /gene="pmrB"
                     /locus_tag="JQ356_002474"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PmrB"
                     /protein_id="HAY4622529.1"
                     /translation="MNLMRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQI
                     QLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQ
                     KELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTP
                     LAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLE
                     DVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGS
                     NIMIKLQEDGGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQL
                     HHGQFFLQNRQETSGTRAWVRLKKDQNVANQI"
     gene            complement(6247..6915)
                     /gene="basR"
                     /locus_tag="JQ356_002475"
     CDS             complement(6247..6915)
                     /gene="basR"
                     /locus_tag="JQ356_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BasR"
                     /protein_id="HAY4622530.1"
                     /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGH
                     YSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKP
                     FALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSR
                     LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVA
                     NEEN"
     gene            complement(6912..8555)
                     /gene="eptA"
                     /locus_tag="JQ356_002476"
     CDS             complement(6912..8555)
                     /gene="eptA"
                     /locus_tag="JQ356_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase EptA"
                     /protein_id="HAY4622531.1"
                     /translation="MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDS
                     LHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDR
                     SMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGAN
                     ILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVR
                     IGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTV
                     SCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACD
                     RVPHQNVTALNLPGQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNR
                     YPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSL
                     VYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQ
                     TQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSK"
     gene            complement(8659..9996)
                     /gene="adiC"
                     /locus_tag="JQ356_002477"
     CDS             complement(8659..9996)
                     /gene="adiC"
                     /locus_tag="JQ356_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HAY4622532.1"
                     /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIY
                     GWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI
                     PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTPGA
                     IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILM
                     TIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT
                     IAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD"
     gene            complement(10133..10894)
                     /locus_tag="JQ356_002478"
     CDS             complement(10133..10894)
                     /locus_tag="JQ356_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY4622533.1"
                     /translation="MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNI
                     IDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAA
                     QHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIH
                     KDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQ
                     SCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA"
     gene            complement(11219..13486)
                     /gene="adiA"
                     /locus_tag="JQ356_002479"
     CDS             complement(11219..13486)
                     /gene="adiA"
                     /locus_tag="JQ356_002479"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418541.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HAY4622534.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     FAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMD
                     RDLLELVDEFAWILEDTTDFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP
                     GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQ
                     DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQD
                     YWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPD
                     TYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSI
                     ENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEG
                     TEIIDGIYHAMCVKA"
     gene            complement(13685..14593)
                     /gene="melR"
                     /locus_tag="JQ356_002480"
     CDS             complement(13685..14593)
                     /gene="melR"
                     /locus_tag="JQ356_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HAY4622535.1"
                     /translation="MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWH
                     GQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL
                     FLSWPLDKDLINHVTHGMMIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM
                     LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK
                     LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS
                     TFGKYVGMSPQQYRKLSQQRRQTFPG"
     gene            14876..16231
                     /gene="melA"
                     /locus_tag="JQ356_002481"
     CDS             14876..16231
                     /gene="melA"
                     /locus_tag="JQ356_002481"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HAY4622536.1"
                     /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPT
                     RLEESHIVVRKLMDSAGASGKITCHTQQKEALQDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATLLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPSTLRYRCAGINHMAFYLELERKTADGS
                     YVNLYPELLAAYEAGQAPKPHIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKNASRIDIKPSREYASTIMNA
                     IWTGESSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLH
                     R"
     gene            16334..>16519
                     /locus_tag="JQ356_002482"
     CDS             16334..>16519
                     /locus_tag="JQ356_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HAY4622537.1"
                     /translation="MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIM"
BASE COUNT         3986 a         4001 c         4348 g         4184 t
ORIGIN      
        1 tttcttgcag taattataaa agccgaaaac agaactcaaa aacaatctgg ctaaataaaa
       61 gtaacaaaat ttgctttaag gaagaatttt ctatgtacac acagaccctg tatgagttaa
      121 gtcaggaggc tgaacgcctg ttacagcttt ctcgccaaca gttgcagtta ctggaaaaaa
      181 tgcctctctc tgtacccgga gacgatgcgg cacaactggc tttaccctgg agtcagccta
      241 atatcgccga acgttacgcg atgctgaata atgagttgcg taaaatttcc cgactggaaa
      301 tggtgctggc gattgtcggt actatgaaag cagggaaatc aaccaccatt aatgccattg
      361 ttggtacgga ggttctgcct aatcgtaatc gcccaatgac tgcgctgccg acgcttattc
      421 gccatacgcc cgggcaaaag gaaccggtac tgcatttttc acatgtcgcg ccaatcgatt
      481 gtttaattca acaattacaa cagcgcctgc gtgattgcga tattaagcat ctgaccgatg
      541 tgctggaaat agataaagat atgcgtgcgc ttatgcagcg gatcgaaaat ggcgtcgctt
      601 tcgaaaaata ttatctgggt gcccagccta tttttcattg tctgaaaagt ttgaatgatt
      661 tagtgcgact ggcgaaggcg ctggacgtcg attttccttt ttctgcttac gccgccattg
      721 agcatattcc cgtgattgaa gtggagtttg tccatctggc ggggctggaa agttatcccg
      781 gtcagttgac gttactggat acccccgggc caaatgaagc cgggcaaccg catctgcaaa
      841 aaatgcttaa ccagcagctg gcacgcgcct cggcggtact ggcggtgctg gattatacgc
      901 aactgaaatc gatctccgat gaagaggtcc gtgaggcgat tttggcggtg gggcaatcgg
      961 tgccgctgta tgtgctggtc aataagttcg atcaacagga tcgtaacagt gacgacgccg
     1021 accaggtgcg ggcactgatt tccgggacgc tgatgaaagg ctgtattacg ccacagcaga
     1081 tatttccggt gtcgtcgatg tggggctacc tggcgaatcg ggcgcgctat gagttagcca
     1141 acaacggtaa gttaccagcg ccagagcaac aacgctgggt ggaagatttt gcccatgccg
     1201 cgctcggcag gcgctggcgt catgccgatc tggcggacct cgaacatatt cgtcatgctg
     1261 ccgatcagtt gtgggaagat tcgctgttcg cccagccaat tcaggcgttg cttcatgccg
     1321 cttacgctaa cgcctcattg tatgctctgc gatctgctgc gcataaactg ttgaattacg
     1381 cgcagcaggc gcgggaatac ctggattttc gtgcgcacgg gttaaacgtc gcttgtgaac
     1441 aattgcggca aaatatccat caggtcgaag aaagtttgca gctattgcaa ctcaatcagg
     1501 cgcaggtgag cggcgagatt aaacatgaaa tcgagctggc cctgacctcc gccaaccact
     1561 ttctgcgtca acagcaagat gcgctgaatg cgcagttagc cgccttgttt caggatgatt
     1621 cggagccgtt aagcgagatt cgtacctgct gtgagacact gttacagacg gcgcagaaca
     1681 ccatcagtcg cgactttacg ctgcgttttg ccgagcttga atccaccctt tgccgggtgt
     1741 taaccgatgt tattcggccc attgagcaac aagtcaaaat ggaattgagc gagtcagggt
     1801 ttcgtcctgg gtttcatttt cctgtttttc acggagtagt tccccacgtc aacactcgcc
     1861 agctgttcag tgaagtcatt tcgcgccagg aggcaacgga cgagcagagc acgcgtttag
     1921 gcgttgtgcg tgagactttt tcgcgctggt tgaatcagcc cgactgggga cggggaaatg
     1981 agaaatcccc gacagaaacg gttgattaca gtgtgttgca acgagcatta agcgcagaag
     2041 tcgatcttta ttgccaacaa atggctaaag ttctggcaga gcaggtcgat gaatctgtta
     2101 cggcaggcat gaatactttt ttcgctgagt tcgcttcatg tttgacggaa ttacagacgc
     2161 gtttacgcga aagcctggct ctgcgtcaac aaaatgaatc ggtggtcagg ctgatgcagc
     2221 agcaattgca gcagactgtg atgactcacg gctggattta caccgacgcc cagctgttac
     2281 gcgatgatat tcaaacactt ttcacggcag aacgatattg accaagacgt tactggacgg
     2341 ccccggtcgc gtgctggagt cggtttatcc ccgcttttta gtggatctgg cgcagggcga
     2401 tgatgcccgc cttccacaag cccatcagca gcagtttcgt gaacgactga tgcaggaact
     2461 tctttcgcgt gtgcagcttc agacatggac gaacggcggc atgttaaatg cgccgcttag
     2521 cctgcgactg acaatggtgg aaaaactggc gtcgatgctg gatcccggtc atctggcgct
     2581 gacgcagatc gcgcagcatc tggcgctgct gcaaaaaatg gatcaccgcc agcactctgc
     2641 tttcccggag ctcccccagc aaattgccgc cttgtatgag tggttttcag cccgttgtcg
     2701 ctggaaggaa aaggcgttaa cgcaacgagg ccaggcctac tggtgcaggc aggtgatcag
     2761 agcgagcaaa tttttacccg ctggcgtgct ggggcgtata acgcctggtc gttgcctggg
     2821 cgctgtttta tcgttctcga agagttgcgt tggggggcat ttggcgatgc ctgtcgtctg
     2881 ggaagcccgc aagcggtggc gttgctgctg ggtgatttgc gcgtgaaagc gacacaacat
     2941 ctggcagaga gtatcaatgc ggccccgacc acgcgtcact attaccatca gtggtttgcc
     3001 tcttcgaccg ttctgacggg cggggatcat gctgattttt taagttggct gggaaagtgg
     3061 accacggcag ataaacaacc cgtttgctgg tcagtgaccc aacgttggca aactgtcgcg
     3121 ctggggatgc cacgactctg ttcagcgcag cgtttggtgg gggcaatggt cgaggaaatc
     3181 ttctctgtaa atttggcgta aataatcagt tacatcaatg agtcctaaac gaaatccatg
     3241 tgtgaagttg atcacaaatt taaatactgg tagggtaaaa aggtcattaa ctgcccaatt
     3301 caggcgtcaa ctggtttgat tgtacattcc ttaaccggag ggtgtaagca aacccgctac
     3361 gcttgttaca gagattgcat cctgcaattc ccgctcccct tttgcggccg tcgcgctgat
     3421 ttttctggcg tttgcggaaa tgggccaact ctgcgaggaa agctatgctg aaaaggaaaa
     3481 aagtaaaacc gattaccctt cgtgatgtca ccattattaa tgacagtaaa ctgcgtaaag
     3541 ccattaccgc agcatcactg ggtaatgcaa tggaatggtt cgattttggt gtttatggtt
     3601 ttgttgctta cgcattaggt aaagtttttt tcccgggggc tgaccccagc gtgcagatgg
     3661 ttgctgcact tgccactttc tccgttccct ttctgattcg accgcttggc ggactcttct
     3721 ttggtatgtt gggcgataaa tatggtcgcc agaagatcct cgctatcact attgtgatta
     3781 tgtcgatcag tacgttctgt attggcttaa taccgtccta cgacacgatt ggtatttggg
     3841 caccgattct gctgttgatc tgtaagatgg cacaaggttt ctcggtcggc ggtgaatata
     3901 ccggggcgtc gatatttgtt gcggaatact cccctgaccg taaacgtggc tttatgggca
     3961 gctggctgga cttcggttct attgccgggt ttgtgctggg tgcgggcgtg gtggtgttaa
     4021 tttcgaccat tgtcggcgaa gcgaacttcc tcgactgggg ctggcgtatt ccgttcttta
     4081 ttgctctgcc gttagggatt atcgggcttt acctgcgcca tgcgctggaa gaaactccgg
     4141 cgttccagca gcatgttgat aaactggaac agggcgaccg cgaaggtttg caggatggcc
     4201 cgaaagtctc gtttaaagag attgccacta aatactggcg cagcctgttg acatgtattg
     4261 gtctggtaat tgccaccaac gtgacttact acatgttgct gacctatatg ccgagttatt
     4321 tgtcgcataa cctgcattac tccgaagacc acggggtgct gattattatc gccattatga
     4381 tcggtatgct gtttgtccag ccggtgatgg gcttgctgag tgaccgtttt ggccgtcgtc
     4441 cgtttgtgct acttggtagt gttgccctgt ttgtgttggc gatcccggcg tttattctga
     4501 ttaacagtaa cgtcatcggc ctgatttttg ccgggttact gatgctggcg gtgatcctta
     4561 actgctttac gggcgttatg gcttctacct tgccagcgat gttcccgacg catatccgtt
     4621 acagcgcgct ggcggcggca tttaatattt cggtgctggt tgccggtctg acgccaacac
     4681 tggcggcctg gctggtcgaa agctcgcaga atctgatgat gcctgcctat tacctgatgg
     4741 tagtggcggt gattggttta atcaccggcg taaccatgaa agagacggca aatcgtccgt
     4801 tgaaaggtgc gacaccggcg gcgtcagata tacaggaagc gaaggaaatt ctcgtcgagc
     4861 attacgataa tatcgagcag aaaatcgata atattgacca cgagattgcc gatttgcagg
     4921 cgaaacgtac ccgcctggtg cagcaacatc cgcgaattga tgaataagct gaaacggatg
     4981 gcctgatgtg acgctgtctt atcaggccaa ttgaactctt aaggttcact taatctctga
     5041 cgcgcatact ctcctccagg ttaacggagg agagtgcaat gaaaaaccgt gtttatatga
     5101 aagtttaact accgtgttca gcgtgctggt ggtcagcagc tttctttata tctggtttgc
     5161 cacgttctga tctttcttca gccgtaccca ggcccgcgtg ccggaagtct cttgccggtt
     5221 ttgcaggaaa aactgcccgt gatgcaactg tgtaatgcgg ctgacaatac ttaaccccag
     5281 accaatcccg ccataacggc tgtccatacg tacaaacgct ttactcaact ccccgcattt
     5341 actctcatca atacctggtc cttcatcttc aactgccatg accgctccgc catcttcttg
     5401 cagcttaatc ataatgttgc tgccttgcgg gctgtaacga tgggcgtttt ctaccaggtt
     5461 tcgcaataac atccgcagca gggttgcatc accctgaacg gtgatgtcgg cggcgctctc
     5521 tggcaatagc agggtttgct gtcgctggtc gagcatggta ctgagttcgt catacgaggg
     5581 gagaatgaca tcttccagca gttttacatg ttgataatta ccggaagaaa atgactgtcc
     5641 ggcacgcgcc agttgcagca gctgggagac gctctccatc atctgatcaa gccgtgccac
     5701 taacggtgct acatcaatgt gatgcgtttt cgccagcagt tccagatgca aacgcacccc
     5761 cgccagtggc gttcgcagtt cgtgcgcgac gtcagcggta aacaaccttt cgttatccag
     5821 cgtgctggtc aggcgactga ccagatcgtt caacgccgaa accaccgctt cgatttcgag
     5881 ggtggcgctg tgaatggcaa tgggcgttaa gttgtcggca gtgcgcgctt ccagctcttt
     5941 ttgcagctcc gccagcgggc gggtgatgcg gcgtaccgcc tgatagcaga taaatagcgt
     6001 caggctgacc ataaagacgc cggggacaat caggctggcg accgcctcgc ggatctcacg
     6061 catgatgtgg cgatcgttgt tgcgattgtc gcgtagcgcc tgctcaaaca gctgaatctg
     6121 ctcggtactt tcatgccata gccagaagac gctgatcagc tcaaacacca acaaaatggc
     6181 cccgatagtc aatatcagcc gttggcgcag cgatattggt cggcgcagaa aacgcatcag
     6241 attcaattag ttttcctcat tcgcgaccag catatagcca aagccgcgca cggtgcggat
     6301 acgggatttg cccactttgt cgcgcagatt gtggatatgc acttccaggg tgttggtcga
     6361 gggttcattg tcccagttat agatgtcgtt gtagagaatt tcccgatgta ccggactgcc
     6421 tgctttgagc attaaccgtg acagcagagc atattctttg ggcgtcagaa tcaactcttc
     6481 accgcccatc catacctgac ggcgacccat attcagcgtc agattgccaa caatcagctc
     6541 actttcgccc tgattattat ggcgtcgtag cagggcgcgg atacgggcgt gtaactcttc
     6601 cagcgcaaaa ggcttcacca gatagtcatc ggcaccgaca tccagcccgg cgattttgtc
     6661 ggtcagcgta tcgcgagcgg tgaggatcag taccggcagg gtatattttt tctgccggat
     6721 acgggcgaga aaatgcagtc catcttcgtc gggtaaccct aaatccagta ccaccaggct
     6781 gtaatgaccg gcttcaaggc tttgttccgc catccgcgcg gttgtcacgc catcgcacgc
     6841 gtagccttcg gtttgcgccg ccagaatcag tccctgcaat aacagcgtat cgtcttcaac
     6901 aatcagaatt ttcatttact cactctcctg caagtttgca gaatatcatc cgcagcctgg
     6961 taatacttcg tctcaacgcc agttaatccc aatagcgtgg agaataaatt gtcttgtgaa
     7021 tagtgttgcg tttgcgcctg tttttgcagg cagttctggt caacctgata ccgtttttga
     7081 taatcctccg acagccacag cagcatcggc acctgttttt ggctatccgg ggcgatggca
     7141 taaggcagac cgtgcagata gatgccattt tcacctaacg attcaccgtg gtcagaaaga
     7201 taaaccaggc tggtggtaaa tttatcctga tgttctttca gcagattaat cgctttatca
     7261 acaatatagt cgacgtaaac cagcgtgttg tcgtaagtgt tcaccagttg ctctttggta
     7321 caggtctgga tctcattggt gtcgcaggtt ggggtaaatt tcctgaactg cggcggatag
     7381 cggttgtaat aggtcggacc gtggctgccg atggtgtgta agacaatcac gccatcaccc
     7441 tgcaggttat tgatgtactc ttccagcccg tggaacagca cttcgtcata gcattcgccg
     7501 ttgatgcact gaccaggcag attcagcgcg gtgacgttct ggtgaggcac gcggtcgcag
     7561 gcacctttac agccgccatc gttgtcattc cacagcacgt tgatgcccgc tcgctgaatg
     7621 atatccagca cgccttcctg gtgctgtgcc agctcttctt tgtaatgctc acgcggcata
     7681 tccgagaaca tgcacggtac tgaaactgcc gttgccgtgc cgcaagatac ggtattaggg
     7741 aaatagacca cgttatcttt cgccagccgc gggttagttt cacgcgggta gccgttgagg
     7801 gagaagttct ccgcccgcga ggtttcgccg acaatcagga tggtcaaatt tttacgtttt
     7861 tcgttctgca ttaacgggtt gcggtgggcg tcttcaccaa ttcgcaccag cggtagattt
     7921 gccagtcgct gatgggagta ccatgaccag ctggcaacaa tgctgttaga ggggcttaag
     7981 gatttcacca gctctttgtt attgcggaac aacgaggcgt agtctttata aaacagtgcg
     8041 gcgaccagca aaatcagtag tacagaaacc agaatattgg ctccacggaa aagaacactg
     8101 cgcagacgcg aggtggcagg tttgattttt atccagcagg caatcagcgc agcaagcacg
     8161 ccgctgaatc ccagcgttaa taacatttgc ggtgtcatca gcgcataact ttctgccgga
     8221 gtggtatcaa taatattggc aatcatcgag cggtcgatga cgatgccgta agtcattatg
     8281 aaatattgtg cagccgcgcc aaccagaata aacaggcagg ccagtggtcg attaagccat
     8341 aagaaagagc ttagtgtcag gacaatatta atcacgctga aagcgacgac cggcatcgac
     8401 aagaaaacca gtacgttatg cagcgaatcc agcggcagcg cctgcaacac ctgtttaaaa
     8461 aaggcaatat tcaggcagat agagatataa aaagcggcca acaatagcca ggcgagtaaa
     8521 ttcaaagagg gtctttttag taggcgcttc aacatcacgg tgtttccatc gaacaaagtg
     8581 cgcatatgct cgcaaagcaa aattaagcca accttaagtt cttaaggttg gcttttatgt
     8641 ttgctggatt aaggggaatt aatctttgct tattggtgca tctaagggat acgggttttt
     8701 atgtagccgg ttgtaattca gcgcatacat ggcggtgatg accatcaggg tgacaaatga
     8761 ccacataacc tctttcgctc cggaccccac cacggcccag atgcagtaga ggaaggcaat
     8821 ggtagtaact gccagatatg ccgggcgtgc tttaccaaag tgaccgtgtc cgagcagcag
     8881 taacgccgca caggtgtaaa gatatggcac cagtgtaaag atgaccgaga cggaagaaac
     8941 cagaccgaac tctttggtcg cgtttggtga aatgctgctg agctggaaga tggtcatcaa
     9001 aataccgacg ataatcagcc ccgccactgg cgtacccgct ttatttacac gggcaaaaat
     9061 cggtgggaac agtccgtcat cggcagcggc tttcgccgtt tgacccgcca gcaacgtcca
     9121 gccgcccagt gaacctaagc aacccgcagc tgcgcagaag gaaacaatgg ccccgggggt
     9181 gtcacccaac gccatccgtg cggcatcacc gaatggcgaa gcagaaacgc gcagtgcggc
     9241 attagggatc atccccataa tcgcggtggt agaaagtaca tagcaaacgg cggcaatcaa
     9301 taccccacca atggtggcga tagggacatt gcgtttcggg tttttcacca cacctgcggc
     9361 aacggaggca ctttccacac cgatgaacga ccacagcgta acgttaaggg tactttgaat
     9421 tgcaccgaag gtacccaggc cgctgacgtt ccatgccgcc atataggttt caccacggaa
     9481 ccagaaccag ccaaatacgg caatcccgac gatggggatc agcgccagca cggtggcaac
     9541 tgcctgcaca cgggtgatca ttttcggacc aacaatgttc agcaggacga agatccacag
     9601 caccacgacg caggtgatgg ttaataccaa tggatctttc agaatcggga agaagtaact
     9661 taaatatcct acgccaatga ccaccatggc gatattgccg atccagcagg ccagccagta
     9721 gaggacgttg gtttgataac cgagaaacgg gccaaagcag cggcgggcgt aagcgtaaga
     9781 accaccagga cttgggtcga ggaacgacat tttggcgtat accatcgaga gccccagtgc
     9841 accgataatc gtcaccaacc atccataaat ggcaatcccg ccagtggagg ccaggtttgc
     9901 aggtaacaga aaaacacctg accccataat attccccgac accatcaggg tgacggggat
     9961 taagcccact ttgtgagcat cagcatccga agacataatt aaactcctgc gaaggcgagc
    10021 ttcgtgacaa taaattacgt catatcatac gcctgcattc gatagttgaa ttattatcga
    10081 ccgggttatc gctgatgccg ttattaatat agctcttcgt taaggttaaa aatcaggcga
    10141 cagtgcgttc tctgtgctga ctaacataat gcagcggcgt cataccgtag aagtctttaa
    10201 agacagaaat aaagtacgac gtactgttgt agccgcagga ctgtgatacc tgagagatat
    10261 ttttaccgtc catcattaat tcatttacgg cataacgcat gcggcaggtg gtgattattt
    10321 ggctataact ggtgttttcg cttttcagct ttttctttaa cagacttggg ctaagacata
    10381 aacaactggc taccatacta agattccagt ctttgtgaat atcgctttca ataatttgat
    10441 aaacgctgtc acttacacaa ttacgtaaca tatacatcat taatgaaagg aattttttac
    10501 tgtcgagaaa acgggatagc accgtgaata ataatgcgcg tgttcgttcc ttttctgact
    10561 cagtttctgc gggcatcatg ctgtgttgcg cggcaacgcg aaagacgtct ggcgtcaggc
    10621 atggcagggt gagtatgggc gtagcgctac gttgccatac tggtatttgc gagagatctt
    10681 tattcagaaa ccggaggtaa tctttgatga tgtcgtgact aatatgagca accaaagtgt
    10741 tgttaagaga ggagacgtcg ataatattat tttcacaatt taataacgcc atatggttag
    10801 ctttaaggct aataggttct ttcccattca cccttatcca gacatctttt tcagtcaata
    10861 aaacaataca aggttggtcg ctgcaaatcc tcatacatgt actcctgagt gcgaataaaa
    10921 gaccagttct cgctaaagca aagcgatacc gagaaatggt tgtataattg tatgacgaat
    10981 ataaacatgc ataaaaataa cgagttttac taatattaca aatttttata gtaatttctc
    11041 atgtacatat ttttttacag ggtaaataac aggcaaaaaa aagcgcgggg tggggccgcg
    11101 caaaaagtat gacatttttg tttgcagcaa tttttatgaa aacgttgcca tactcaaaag
    11161 gcctaaggcc aggcggcgta atgttattta aacaattacg ccttcagcgg aatagtggtt
    11221 acgctttcac acacatagcg tggtaaatac cgtcaataat ttcagtccct tcagtttcgt
    11281 gttcaaatcc agggaaatgg tggtcccagg attgcagcga gcgtaaataa cttacttgcg
    11341 gactgttttt atcgccgaag ttttcaccag acagcagcat cgggattcct ggcggatatg
    11401 ggataactga gtttgccgcg atgcgtcctg gcagattttc aatggatacc agttcgacat
    11461 tgttgtcgac aatcgcgttg tacgcttcac gcggggtgat ttccgccacc ggcaggccgg
    11521 aataggcttc gttcaaccgt gcgccagggt tgttttcttt cagccaggca aacatggtgt
    11581 cacccagatc gtgaatcccc atgttcgcgt aagtgtcagg atattgttca acaagttccg
    11641 gcatcacctg cgccagcggt gtgttggcgt catagtggcg tttgaaggag caaagggtgt
    11701 taaccagagt cccccatttc ccacgggtta cgcccataga gaacaggaac ataatttgga
    11761 agtcagtggt gcgggtaggc acaatgccgt ggcgaccaag ccaggcagtg accagcgccg
    11821 ccggaacacc ggtttcttcc agttcaccat cttcacccat tcccggagca aggatgctga
    11881 ctttaatcgg gtcgagcata ctccagttat ccggaatatc tttgaagccg tgccagcttt
    11941 cgcccggatg cattacccag tagtcctgaa cggtggtcag cagtttggtt ggtgcgtcag
    12001 caaagtcata ggttttgccg gtttgtgggt cggtgacgac ttctttgttc cacggtttga
    12061 agaaccagct accgtcagcg gtgaactctt tatacagccg cgccatcgcc tgacggaaat
    12121 caaccgcttc gtcgatcact tcctgcgtca gtgacaggcc gctgttgccg tccatcatcg
    12181 acaccgccac gtcgttggat gcgcagatgg catacagcgg ggaggtggtg gcatgcatca
    12241 tgtaggcctg gttgaagcgg gagaagttaa tcgccccacg accttcacgt acatgaatat
    12301 aagaagcctg tgaaagcgca ttcagcagtt tgtgggtgga gtgggtggcg aaaacggtag
    12361 gaccgttgtg atcgccaggt tcgccgcgca tggcatagtg atcggcatag atcgggttga
    12421 aacgtgcata gccgtaccag gcttcgtcaa agtgcagacg atcggaggtt ttttccagca
    12481 gatcctgcgc ttctttagcg ttataacaca cgccgtcata ggtgcagttg gtcaccacgc
    12541 agtaagacgg tttttgcccg gctttgtctt tagtcagcgg gctttcactg attttcttct
    12601 gcaaggtttc aggttgcatt tcctgcggat agattggccc gataatgccg tagcggttgc
    12661 ggcttggcac catgtagacc ggtttcgcgc ctgtcagcat caagccttgt tcgatggatt
    12721 tatggcagtt acggtcaacg accacgacat cgttatcggt catgcaagcc tgcatgatgg
    12781 tgcggttaga gccggaagta ccgacgacta ccgaccagga gcgatcggca ccaaatacgc
    12841 gtgcggcata tttttcgctt tcgccaaatg cgccagtatg gtcaagcaaa gaaccgaggg
    12901 aagttcgttc gatgcccata tcggtgcgga acagattttc tccatagtag tcatggtaga
    12961 aacgtccggc gggtgttttg gtaaaaccaa cgccgccctg gtggcctggc gctgcccagg
    13021 aatattcatg gatgtcgcta tacttcatca gcgcgctgaa cagtggcggc aacagctgct
    13081 ggcggtagcg ggtcatcgcg gcaacggcgc gtccggcgat aaagtcggtg gtatcttcca
    13141 gaatccaggc gaattcatcg acaagctcca gcaggtcgcg atccattgcg gcgagggctt
    13201 tttcccgatc gcccaacagg aagaccggca cgttttgttg gcgctcatga agcttaccga
    13261 tcaattgtct gacgttttga tgttcgtccg gatgttccat ttgatagctg aacatcaggc
    13321 agtcaatggc ttcgtttgaa gagagaatgg caaaaccatc atcaaaggag gtggatttaa
    13381 tcacggtaac attttgctgg cttaaagcat ctgccagacg ctcaacggcg ttaccgaccc
    13441 aggtgtcttg atggagaaac tcgctttcaa caattaatac tttcatcatt gcttacccgg
    13501 ttatgaagga atcttcgttg cgggcaagta tcttccggcc ttttcgggct gtaaagcgcg
    13561 tgaaaaacaa acatttttga aatatttatt tttataaaca atgcgttatg tgattatttt
    13621 aaattatttt cactgcttgt tatcgacggc taaactattt ttttggctga tactgatatc
    13681 gtctttagcc gggaaacgtc tggcggcgct gttggctaag tttgcggtat tgttgcggcg
    13741 acatgccgac atatttgccg aacgtgctgt aaaaacgact acttgaacga aagcctgccg
    13801 tcagggcaat atcgagaata cttttatcgg tatcgctcag taacgcgcga acgtggttga
    13861 tgcgcatcgc ggtaatgtac tgtttcatcg tcaattgcat gacccgctgg aatatcccca
    13921 ttgcatagtt ggcgttaagt ttgacgtgct cagccacatc gttgatggtc agcgcctgat
    13981 catagttttc ggcaataaag cccagcatct ggctaacata aaattgcgca tggcgcgaga
    14041 cgctgttttt gtgtgtgcgc gaggttttat tgaccagaat cggttcccag ccagagaggc
    14101 taaatcgctt gagcatcagg ccaatttcat caatggcgag ctggcgaatt tgctcgttcg
    14161 gactgtttaa ttcctgctgc cagcggcgca cttcaaacgg gctaagttgc tgtgtggcca
    14221 gtgatttgat catcatgccg tgagtgacgt ggttaatcag gtctttatcc agcggccagg
    14281 agagaaacag atgcatcggc agattaaaaa tcgccatgct ctgacaggtt ccggtatctg
    14341 ttagttggtg cggtgtacag gcccagaaca gcgtgatatg accctgattg atattcactt
    14401 tttcattgtt aatcaggtat tccacatcgc catcgaaagg cacattcact tcgacctgac
    14461 catgccagtg gctggtgggc atgatatgcg gtgcgcgaaa ctcaatctcc atccgctggt
    14521 attccgaata cagcgacagc gggctgcggg tctgtttttc gtcgctgctg cacataaacg
    14581 tatctgtatt catggatggc tctctttcct ggaatatcag aattatggca ggagtgaggg
    14641 aggatgactg cgagtgggag cacggttttc accctcttcc cagagaggcg aggggagcgt
    14701 ccgagcatca tgaggccgaa aactctgctt ttcaggtaac ttattaccat aaactcagat
    14761 ttactgctgc ttcacgcagg atctgagttt atgggaatgc tcaacctgga agccggaggt
    14821 tttctgcaga ttcgcctgcc atgatgaagt tattcaagca agccaggaga tctgcatgat
    14881 gactgcaccc aaaattacat ttatcggcgc tggttcgacg attttcgtta aaaatattct
    14941 tggtgatgtg ttccatcgag aggcgctgaa aacggcgcat attgccctga tggacattga
    15001 tcccacccgc ctggaagagt cgcatattgt ggtgcgtaag ctgatggatt cagcaggggc
    15061 cagcggcaaa atcacctgcc acacccaaca gaaagaagcc ttacaggatg ccgattttgt
    15121 cgtggtggca tttcagattg gcggttatga accttgcacg gtgactgatt tcgaggtctg
    15181 taagcggcat ggtctggaac aaaccattgc cgatacgttg gggccgggcg gtattatgcg
    15241 cgcgctacgt accattccgc atctgtggca aatttgcgag gacatgacgg aagtctgccc
    15301 cgatgccaca ttgctcaact acgttaaccc aatggcgatg aatacctggg cgatgtatgc
    15361 ccgctatccg catatcaaac aggtagggct gtgccattcg gtgcagggaa cggcggaaga
    15421 gctggcgcgt gacctcaata tcgatccgtc cacgctgcgt taccgttgcg ctggtatcaa
    15481 ccatatggcg ttttacctgg aactggagcg taaaaccgcc gacggcagtt acgtgaatct
    15541 ctacccggaa ctgctggcgg cttatgaagc agggcaggca ccgaagccac atattcatgg
    15601 taatactcgc tgccagaata ttgtgcgcta cgaaatgttc aaaaagctgg gctacttcgt
    15661 cacggaatcg tcagaacatt ttgccgaata tacgccgtgg tttattaagc caggtcgtga
    15721 ggatttgatt gagcgttata aagtaccgct ggatgagtac ccgaaacgct gcgtcgagca
    15781 gctggcgaac tggcataaag agctggagga gtataaaaac gcctcccgga ttgatattaa
    15841 accgtcacgg gaatatgcca gcacaatcat gaacgctatc tggactggcg agtcgagtgt
    15901 gatttacggc aacgtccgta acgatggttt gattgataac ctgccacaag gatgttgcgt
    15961 ggaagtagcc tgtctggttg atgctaatgg cattcagccg accaaagtcg gtacgctacc
    16021 ttcgcatctg gccgccctga tgcaaaccaa catcaacgta cagacgctgc tgaccgaagc
    16081 tattcttacg gaaaatcgcg accgtgttta ccacgccgcg atgatggacc cgcatactgc
    16141 cgccgtgctg ggcattgacg aaatatatgc tcttgttgac gacctgattg ccgcccacgg
    16201 cgactggctg ccaggctggt tgcaccgtta aaacgcgact aaacgctact gcgccggggg
    16261 atttattccg gcgcacacct ctgacgatac caataacaga aggcgggcgt tggtaacagc
    16321 gacccgatac cctatgagca tttcaatgac tacaaaactc agttatggat ttggagcgtt
    16381 cgggaaggat tttgcgatcg gcattgtgta tatgtacctc atgtattact acaccgatgt
    16441 cgttgggctg tctgtgggtt tggtcggtac tttgtttctg gtggcgagga tctgggatgc
    16501 tattaacgat ccgattatg
//
LOCUS       DADKRT010000093        16473 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.094, whole genome shotgun sequence.
ACCESSION   DADKRT010000093 DADKRT010000000
VERSION     DADKRT010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 16473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16473
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.094"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JQ356_002483"
     CDS             complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JQ356_002483"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HAY4622538.1"
                     /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
                     EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR"
     gene            complement(1607..1714)
                     /locus_tag="JQ356_002484"
     CDS             complement(1607..1714)
                     /locus_tag="JQ356_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622539.1"
                     /translation="MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV"
     gene            2095..2499
                     /gene="sdhC"
                     /locus_tag="JQ356_002485"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             2095..2499
                     /gene="sdhC"
                     /locus_tag="JQ356_002485"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY4622540.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFV
                     AVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
                     YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
     gene            2493..2840
                     /gene="sdhD"
                     /locus_tag="JQ356_002486"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             2493..2840
                     /gene="sdhD"
                     /locus_tag="JQ356_002486"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HAY4622541.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            2840..4606
                     /gene="sdhA"
                     /locus_tag="JQ356_002487"
     CDS             2840..4606
                     /gene="sdhA"
                     /locus_tag="JQ356_002487"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HAY4622542.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            4622..5338
                     /locus_tag="JQ356_002488"
     CDS             4622..5338
                     /locus_tag="JQ356_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HAY4622543.1"
                     /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRNA"
     gene            5639..8440
                     /gene="sucA"
                     /locus_tag="JQ356_002489"
     CDS             5639..8440
                     /gene="sucA"
                     /locus_tag="JQ356_002489"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HAY4622544.1"
                     /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
                     FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
                     YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
                     AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
                     FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
                     QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVE"
     gene            8455..9672
                     /gene="odhB"
                     /locus_tag="JQ356_002490"
     CDS             8455..9672
                     /gene="odhB"
                     /locus_tag="JQ356_002490"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HAY4622545.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKSPAKESAP
                     AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
                     QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
                     RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
                     TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK
                     ELLEDPTRLLLDV"
     gene            9948..11114
                     /gene="sucC"
                     /locus_tag="JQ356_002491"
     CDS             9948..11114
                     /gene="sucC"
                     /locus_tag="JQ356_002491"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HAY4622546.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQLDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIIG
                     AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
     gene            11114..11983
                     /gene="sucD"
                     /locus_tag="JQ356_002492"
     CDS             11114..11983
                     /gene="sucD"
                     /locus_tag="JQ356_002492"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HAY4622547.1"
                     /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
                     GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
                     AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKTVLK"
     gene            complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JQ356_002493"
     CDS             complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JQ356_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-D-glycerate transport/metabolism system
                     transcriptional repressor MngR"
                     /protein_id="HAY4622548.1"
                     /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
                     TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
                     EVIPADDFLQQQLQITAQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
                     KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY
                     SRNAFNTDDYKFTLIAQRKSSR"
     gene            12918..14894
                     /gene="mngA"
                     /locus_tag="JQ356_002494"
     CDS             12918..14894
                     /gene="mngA"
                     /locus_tag="JQ356_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS 2-O-a-mannosyl-D-glycerate transporter
                     subunit IIABC"
                     /protein_id="HAY4622549.1"
                     /translation="MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALRLNARFTSREEA
                     IHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVAT
                     LSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTMHMQLLTALTTRLADDEIRARIQSATT
                     PDELLSALDDKGGTQPSASFSNAPTIVCVPACPAGIAHTYMAAEYLEKAGRKLGVNVY
                     VEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEAL
                     IQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLL
                     SQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGL
                     AANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLML
                     FVVGEPVAWINNSLTAWLNGLSGSNALLLGAIFGFMCSFDLGGPVNKAAYAFCLGAMV
                     NGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPM
                     AIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWF
                     GAALVGAAISTAILLIWRRHAVKHGNYLTDGVMP"
     gene            14912..>16473
                     /locus_tag="JQ356_002495"
     CDS             14912..>16473
                     /locus_tag="JQ356_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY4622550.1"
                     /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
                     NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIV
                     RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDK
                     TEFLWQSSDGSEVTAQVLPLGYAIGKYLPTDENGLRKRLDSYFDVLEKASVTKEILLP
                     NGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRESLATLKGEFIDGK
                     YMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILK
                     NHAHDSIGCCCSDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNL
                     MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF
                     MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLV
                     DKDSGVRYDRVL"
BASE COUNT         3953 a         4132 c         4488 g         3900 t
ORIGIN      
        1 aatatatgaa tgtccgatag tggattttat ttttacaatt ttttgtgttt aggcatataa
       61 aaattaaccc gccatttgaa cggcgggtta aaatatttac aacttagcaa tcaaccatta
      121 acgcttgata tcgcttttaa agtcgcgttt ttcatatcct gtatacagct gacgcggacg
      181 ggcaatcttc ataccgtcac tgtgcatttc gctccagtgg gcgatccagc caacggtacg
      241 tgccattgcg aaaatgacgg tgaacatgga agacggaata cccatcgctt tcaggatgat
      301 accagagtag aaatcgacgt tcgggtacag tttcttctcg ataaagtacg ggtcgttcag
      361 cgcgatgttt tccagctcca tagccacttc cagcaggtca tctttggtgc ccagctcttt
      421 cagaacttca tggcaggttt cacgcattac ggtggcgcgc gggtcgtaat ttttgtacac
      481 gcggtgaccg aagcccatca ggcggaaaga atcattttta tctttcgcac gacgaacaaa
      541 ttccggaatg tgtttaacgg agctaatttc ttccagcatt ttcagcgccg cttcgttagc
      601 accaccgtgc gcaggtcccc acagtgaagc aatacctgct gcgatacagg caaacgggtt
      661 cgcacccgaa gagccagcgg tacgcacggt ggaggtagag gcgttctgtt catggtcagc
      721 gtgcaggatc agaatacggt ccatagcacg ttccagaatc ggattaactt catacggttc
      781 gcacggcgtg gagaacatca tattcaggaa gttaccggca taggagagat cgttgcgcgg
      841 ataaacaaat ggctgaccaa tggaatactt gtaacacatc gcggccatgg tcggcatttt
      901 cgacagcagg cggaacgcgg caatttcacg atgacgagga ttgttaacat ccagcgagtc
      961 gtgatagaac gccgccagcg cgccggtaat accacacatg actgccattg gatgtgagtc
     1021 gcgacggaaa gcgtggaaca gacgggtaat ctgctcgtgg atcatggtat gacgggtcac
     1081 cgtagtttta aattcgtcat actgttcctg agtcggtttt tcaccattca gcaggatgta
     1141 acaaacttcc aggtagttag aatcggtcgc cagctgatcg atcgggaaac cgcggtgcag
     1201 caaaatacct tcatcaccat caataaaagt aattttagat tcgcaggatg cggttgaagt
     1261 gaagcctggg tcaaaggtga acacaccttt tgaaccgaga gtacggatat caataacatc
     1321 ttgacccagc gtgcctttca gcacatccag ttcaacagct gtgtccccgt tgagggtgag
     1381 ttttgctttt gtatcagcca tttaaggtct ccttagcgcc ttattgcgta agactgccgg
     1441 aacttaaatt tgccttcgca catcaacctg gctttacccg tttgttattt ggctcgccgc
     1501 tctgtgaaag aggggaaaac ctgggtacag agctctgggc gcttgcaggt aaaggatcca
     1561 ttgatgacga ataaatggcg aatcaagtac ttagcaatcc gaattattaa acttgtctac
     1621 cactaataac tgtcccgaat gaattggtca atacttccac actgttacat aagttaatct
     1681 taggtgaaat accgacttca taacttttac gcattatatg cttttcctgg taatgtttgt
     1741 aacaactttg ttgagtgatt gtcaaattag atgattaaaa attaaataaa tgttgttgtc
     1801 gtgacctgga tcactgttca ggataaaacc cgacaaacta tatgtaggtt aattgtaatg
     1861 attttgtgaa cagcctatac tgccgctagg tctccggaac accctgcaat cccgagccac
     1921 ccagcgttgt aacgtgtcgt tttcgcatct ggaagcagtg ttttgcatga cgcgcagtta
     1981 tagaaaggac gctgtctgac ccgcaagcag accggaggaa ggaaatcccg acgtctccag
     2041 gtaacagaaa gttaacctct gtgcccgtag tccccaggga ataataagaa cagcatgtgg
     2101 gcgttattca tgataagaaa tgtgaaaaaa caaagacctg ttaatctgga cctacagacc
     2161 atccggttcc ccatcacggc gatagcgtcc attctccatc gcgtttccgg tgtgatcacc
     2221 tttgttgcag tgggcatcct gctgtggctt ctgggtacca gcctctcttc ccctgaaggt
     2281 ttcgagcaag cttccgcgat tatgggcagc ttcttcgtca aatttatcat gtggggcatc
     2341 cttaccgctc tggcgtatca cgtcgtcgta ggtattcgcc acatgatgat ggattttggc
     2401 tatctggaag aaacattcga agcgggtaaa cgctccgcca aaatctcctt tgttattact
     2461 gtcgtgcttt cacttctcgc aggagtcctc gtatggtaag caacgcctcc gcattaggac
     2521 gcaatggcgt acatgatttc atcctcgttc gcgctaccgc tatcgtcctg acgctctaca
     2581 tcatttatat ggtcggtttt ttcgccacca gtggcgaact gacatatgaa gtctggatcg
     2641 gtttcttcgc ctctgcgttc accaaagtgt tcaccctgct ggcgctgttt tctatcttga
     2701 ttcatgcctg gatcggcatg tggcaggtgt tgaccgacta cgttaaaccg ctggcattgc
     2761 gcctgatgct gcaactggtg attgtcgttg cactggtggt ttacgtgatt tatggattcg
     2821 ttgtggtgtg gggtgtgtga tgaaattgcc agtcagagaa tttgatgcag ttgtgattgg
     2881 tgccggtggc gcaggtatgc gcgcggcgct gcaaatttcc cagagcggcc agacctgtgc
     2941 gctgctctct aaagtcttcc cgacccgttc ccataccgtt tctgcgcaag gcggcattac
     3001 cgttgcgctg ggtaataccc atgaagataa ctgggaatgg catatgtacg acaccgtaaa
     3061 agggtcggac tatatcggtg accaggacgc gattgaatat atgtgtaaaa ccgggccgga
     3121 agcgattctg gaactcgaac acatgggcct gccgttctcg cgtcttgatg atggtcgtat
     3181 ctatcaacgt ccgtttggcg gtcagtcgaa aaacttcggc ggcgagcagg cggcacgcac
     3241 tgcggcggcg gctgaccgta ccggtcacgc actgttgcac acgctttatc agcagaacct
     3301 gaaaaaccac accaccattt tctccgagtg gtatgcgctg gatctggtga agaaccagga
     3361 tggcgcggtg gtgggttgta ctgcactgtg catcgaaact ggtgaagtgg tttatttcaa
     3421 agcccgcgct accgtgctgg cgactggcgg ggcagggcgt atttatcagt ccaccactaa
     3481 cgcccacatt aacactggcg acggcgtcgg catggctatc cgcgcaggcg taccggtgca
     3541 ggatatggaa atgtggcagt tccacccgac cggtattgcc ggtgcgggcg tactggtcac
     3601 cgaaggttgc cgtggtgaag gcggttatct gctgaacaaa catggcgaac gctttatgga
     3661 gcgttatgcg ccgaacgcca aagacctggc gggccgtgat gtggtggcgc gttccatcat
     3721 gatcgaaatc cgtgaaggtc gcggctgtga tggtccgtgg gggccacacg cgaaactgaa
     3781 actcgaccac ctgggtaaag aagttctcga atcccgtctg ccgggcatcc tggaactctc
     3841 ccgtaccttc gctcacgtcg atccggtgaa agagccgatc ccggttatcc caacctgtca
     3901 ttacatgatg ggcggtattc cgaccaaagt gaccggtcag gcgctgactg tgaatgagaa
     3961 aggcgaagat gtggttgttc cgggactgtt tgccgttggt gaaatcgctt gtgtatcggt
     4021 acacggcgct aaccgtctgg gcggcaactc gctgctggac ctggtggtct ttggtcgtgc
     4081 ggcaggtctg catctgcaag agtctatcgc cgagcagggc gcattgcgcg atgccagcga
     4141 gtctgatgtt gaagcatctc tggatcgtct gaaccgctgg aacaataatc gtaacggtga
     4201 agatccggtg gcgattcgta aagcgctgca agaatgtatg cagcataact tctcggtctt
     4261 ccgtgaaggt gatgcgatgg cgaaagggct tgagcagttg aaagttatcc gcgagcgtct
     4321 gaaaaatgcc cgtctggatg acacttccag cgagttcaac acccagcgcg ttgagtgcct
     4381 ggaactggat aacctgatgg aaacggcgta tgcaacggct gtttctgcca acttccgtac
     4441 cgaaagccgt ggcgcgcata gccgcttcga cttcccggat cgtgatgatg aaaactggct
     4501 gtgccactcc ctgtatctgc cagagtcgga atccatgacg cgccgaagcg tcaacatgga
     4561 accgaaactg cgcccggcat tcccgccgaa gattcgtact tactaatgcg gagacaggaa
     4621 aatgagactc gagttttcaa tttatcgcta taacccggat gttgatgatg ctccgcgtat
     4681 gcaggattac accctggaag cggaagaagg tcgcgacatg atgctgctgg atgcgcttat
     4741 ccagctgaaa gagaaagatc ccagcctgtc gttccgccgc tcctgtcgtg aaggtgtgtg
     4801 cggttccgac ggtctgaaca tgaacggcaa gaatggtctg gcctgtatta ccccgatttc
     4861 ggcactcaac cagccgggca agaagattgt gattcgcccg ctgccaggtt taccggtgat
     4921 ccgcgatttg gtggtagaca tgggacaatt ctatgcgcaa tatgagaaaa ttaagcctta
     4981 cctgttgaat aatggacaaa atccgccagc tcgcgagcat ttacagatgc cagagcagcg
     5041 cgaaaaactc gacgggctgt atgaatgtat tctctgcgca tgttgttcaa cctcttgtcc
     5101 gtctttctgg tggaatcccg ataagtttat cggcccggca ggcttgttag cggcatatcg
     5161 tttcctgatc gatagccgtg ataccgagac tgacagccgc ctcgacggtt tgagcgatgc
     5221 attcagcgta ttccgctgtc acagcatcat gaactgcgtc agtgtatgtc cgaaggggct
     5281 gaacccgacg cgcgccatcg gccatatcaa gtcgatgttg ttgcaacgta atgcgtaaac
     5341 cgtaggcctg ataagacgcg caagcgtcgc atcaggcaac cagtgccgga tgcggcgtga
     5401 acgccttatc cggcctacaa gtcattaccc gtaggcctga taagcgcagc gcatcaggcg
     5461 taacaaagaa atgcaggaaa tctttaaaaa ctgcccctga cactaagaca gtttttaaag
     5521 gttccttcgc gagccactac gtagacaaga gctcgcaagt gaaccccggc acgcacatca
     5581 ctgtgcgtgg tagtatccac ggcgaagtaa gcataaaaaa gatgcttaag ggatcacgat
     5641 gcagaacagc gctttgaaag cctggttgga ctcttcttac ctctctggcg caaaccagag
     5701 ctggatagaa cagctctatg aagacttctt aaccgatcct gactcggttg acgctaactg
     5761 gcgttcgacg ttccagcagt tacctggtac gggagtcaaa ccggatcaat tccactctca
     5821 aacgcgtgaa tatttccgcc gcctggcgaa agacgcttca cgttactctt caacgatctc
     5881 cgaccctgac accaatgtga agcaggttaa agtcctgcag ctcattaacg cataccgctt
     5941 ccgtggtcac cagcatgcga atctcgatcc gctgggactg tggcagcaag ataaagtggc
     6001 cgatctggat ccgtctttcc acgatctgac cgaagcagac ttccaggaaa ccttcaacgt
     6061 cggttcattt gccagcggca aagaaaccat gaaactcggc gagctgctgg aagccctcaa
     6121 gcaaacctac tgcggcccga ttggtgccga gtatatgcac atcaccagca ccgaagaaaa
     6181 acgctggatc caacagcgta tcgagtctgg tcgcgcgact ttcaatagcg aagagaaaaa
     6241 acgcttctta agcgaactga ccgccgctga aggccttgaa cgttacctcg gcgcaaaatt
     6301 ccctggcgca aaacgcttct cgctggaagg cggtgacgcg ttaatcccga tgcttaaaga
     6361 gatgatccgc cacgctggca acagcggcac ccgcgaagtg gttctcggga tggcgcaccg
     6421 tggtcgtctg aacgtgctgg tgaacgtgct gggtaaaaaa ccgcaagact tgttcgacga
     6481 gttcgccggt aaacataaag aacacctcgg cacgggtgac gtgaaatacc acatgggctt
     6541 ctcgtctgac ttccagaccg atggcggcct ggtgcacctg gcgctggcgt ttaacccgtc
     6601 tcaccttgag attgtaagcc cggtagttat cggttctgtt cgtgcccgtc tggacagact
     6661 tgatgagccg agcagcaaca aagtgctgcc aatcaccatc cacggtgacg ccgcagtgac
     6721 cgggcagggc gtggttcagg aaaccctgaa catgtcgaaa gcgcgtggtt atgaagttgg
     6781 cggtacggta cgtatcgtta tcaacaacca ggttggtttc accacctcta atccgctgga
     6841 tgcccgttct acgccgtact gtactgatat cggtaagatg gttcaggccc cgattttcca
     6901 cgttaacgcg gacgatccgg aagccgttgc ctttgtgacc cgtctggcgc tcgatttccg
     6961 taacaccttt aaacgtgatg tcttcatcga cctggtgtgc taccgccgtc acggccacaa
     7021 cgaagccgac gagccgagcg caacccagcc gctgatgtat cagaaaatca aaaaacatcc
     7081 gacaccgcgc aaaatctacg ctgacaagct ggagcaggaa aaagtggcga cgctggaaga
     7141 tgccaccgag atggttaacc tgtaccgcga tgcgctggat gctggcgatt gcgtagtggc
     7201 agagtggcgt ccgatgaaca tgcactcttt cacctggtcg ccgtacctca accacgaatg
     7261 ggacgaagag tacccgaaca aagttgagat gaagcgcctg caggagctgg cgaaacgcat
     7321 cagcacggtg ccggaagcag ttgaaatgca gtctcgcgtt gccaagattt atggcgatcg
     7381 ccaggcgatg gctgccggtg agaaactgtt cgactggggc ggtgcggaaa acctcgctta
     7441 cgccacgctg gttgacgaag gcattccggt tcgcctgtcg ggtgaagact ccggtcgcgg
     7501 taccttcttc caccgccacg cggtgatcca caaccagtct aacggttcca cttacacgcc
     7561 gctgcaacac atccataacg ggcagggcgc gttccgcgtc tgggactccg tactgtctga
     7621 agaagcagtg ctggcgtttg aatacggtta tgccaccgca gaaccacgca ctctgaccat
     7681 ctgggaagcg cagttcggtg acttcgctaa cggtgctcag gtggttatcg accagttcat
     7741 ctcctctggc gaacagaaat ggggccggat gtgtggtctg gtgatgttgc tgccgcacgg
     7801 ttatgaaggg caggggccgg agcactcctc cgcgcgtctg gaacgttatc tgcaactttg
     7861 tgctgagcaa aacatgcagg tgtgcgtacc gtctaccccg gcacaggttt accacatgct
     7921 gcgtcgtcag gcgctgcgcg ggatgcgtcg tccgctggtc gtgatgtcgc cgaaatccct
     7981 gctgcgtcat ccgctggcgg tttccagcct cgaagaactg gcgaacggca ccttcctgcc
     8041 agccatcggt gaaatcgacg agcttgatcc gaagggcgtg aagcgcgtag tgatgtgttc
     8101 tggtaaggtt tattacgacc tgctggaaca gcgtcgtaag aacaatcaac acgatgtcgc
     8161 cattgtgcgt atcgagcaac tctacccgtt cccgcataaa gcgatgcagg aagtgttgca
     8221 gcagtttgct cacgtcaagg attttgtctg gtgccaggaa gagccgctca accagggcgc
     8281 atggtactgc agccagcatc atttccgtga agtgattccg tttggggctt ctctgcgtta
     8341 tgcaggccgc ccggcctccg cctctccggc ggtagggtat atgtccgttc accagaaaca
     8401 gcaacaagat ctggttaatg acgcgctgaa cgtcgaataa ataaaggata cacaatgagt
     8461 agcgtagata ttctggtccc tgacctgcct gaatccgtag ccgatgccac cgtcgcaacc
     8521 tggcataaaa aacccggcga cgcagtcgta cgtgatgaag tgctggtaga aatcgaaact
     8581 gacaaagtgg tactggaagt accggcatca gcagacggca ttctggatgc ggttctggaa
     8641 gatgaaggta caaccgtaac gtctcgtcag atccttggtc gcctgcgtga aggcaacagc
     8701 gccggtaaag aaaccagcgc caaatctgaa gagaaagcgt ccactccggc gcaacgccag
     8761 caggcgtctc tggaagagca aaacaacgat gcgttaagcc cggcgatccg tcgcttgctg
     8821 gctgaacata acctcgacgc cagcgctatt aaaggcaccg gcgtgggtgg tcgtctgacc
     8881 cgtgaagatg tggaaaaaca tctggcgaaa tccccggcga aagagtctgc accggcagcg
     8941 gctgctccgg cggcgcaacc ggctctggct gcacgtagtg aaaaacgtgt cccgatgact
     9001 cgcctgcgta agcgtgtggc agagcgtctg ctggaagcga aaaactccac cgccatgctg
     9061 accacgttca acgaagtcaa catgaagccg attatggatc tgcgtaagca gtacggtgaa
     9121 gcgtttgaaa aacgccacgg catccgtctg ggctttatgt ccttctacgt gaaagcggtg
     9181 gttgaagccc tgaaacgtta cccggaagtg aatgcttcta tcgacggcga tgacgtggtt
     9241 taccacaact atttcgacgt cagcatggcg gtttctacgc cgcgcggcct agtgacgccg
     9301 gttctgcgtg atgtcgatac cctcggcatg gcagacatcg agaagaaaat caaagagctg
     9361 gcagtcaaag gccgtgatgg caagctgacc gttgaagatc tgaccggtgg taacttcacc
     9421 atcaccaacg gtggtgtgtt cggttccctg atgtctacgc cgatcatcaa cccgccgcag
     9481 agcgcaattc tgggtatgca cgctatcaaa gatcgtccga tggcggtgaa tggtcaggtt
     9541 gagatcctgc cgatgatgta cctggcgctg tcctacgatc accgtctgat cgatggtcgc
     9601 gaatccgtgg gcttcctggt aacgatcaaa gagttgctgg aagatccgac gcgtctgctg
     9661 ctggacgtgt agtagtttaa gtttcacctg cactgtagac aggataaggc attatcgcct
     9721 tctccggcaa ttgaagcctg atgcgacgct taacgcgtct tatcaggcct acgggaagca
     9781 ccaatgtagg tcggataagg cgcttgcgcc gcatccgaca agcgatgcct gatgcgacac
     9841 ttacgcgtct tatcaggcct acaggtgacc gacaatgccc ggaggcgata cgaaatattc
     9901 ggtctacggt ttaaaagata acgattgctg aaggatggac agaacacatg aacttacatg
     9961 aatatcaggc aaaacaactt tttgcccgct atggcttacc agcaccggtg ggttatgcct
    10021 gtactactcc gcgcgaagca gaagaagccg cttcaaaaat cggtgccggt ccgtgggtag
    10081 tgaaatgtca ggttcacgct ggtggccgcg gtaaagcggg cggtgtgaaa gttgtaaaca
    10141 gcaaagaaga catccgtgct tttgcagaaa attggctcgg caagcgtctg gtaacgtatc
    10201 aaacagatgc caatggccaa ccggttaacc agattctggt tgaagcagcg accgatatcg
    10261 ctaaagagct gtatctcggt gccgttgtag accgtagttc ccgtcgtgtg gtctttatgg
    10321 cctccactga aggcggcgtg gaaatcgaaa aagtggcgga agaaactccg cagctgatcc
    10381 ataaagttgc gcttgatccg ctgacaggcc cgatgccgta tcagggacgc gagctggcgt
    10441 tcaaactggg tctggaaggt aaactggttc agcagttcac caaaatcttc atgggtctgg
    10501 cgaccatttt cctggagcgc gacctggcgt tgatcgaaat caacccgctg gtcatcacca
    10561 aacagggtga tctgatttgc ctcgacggca aactgggcgc tgatggcaac gcactgttcc
    10621 gccagcttga tctgcgcgaa atgcgtgacc agtcgcagga agatccgcgt gaagcacagg
    10681 ctgcacagtg ggaactgaac tacgttgcgc tggacggtaa catcggttgt atggttaacg
    10741 gcgcaggtct ggcgatgggt acgatggaca tcgttaaact gcacggcggc gaaccggcta
    10801 acttccttga cgttggcggc ggtgcaacca aagaacgtgt aaccgaagcg ttcaaaatca
    10861 tcctctctga cgacaaagtg aaagtcgttc tggttaacat cttcggcggt atcgttcgtt
    10921 gcgacctgat cgctgacggt atcatcggcg cggtagcaga agtgggtgtt aacgtaccgg
    10981 tcgtggtacg tctggaaggt aacaacgccg aactcggcgc gaagaaactg gctgacagcg
    11041 gcctgaatat tattgcagca aaaggtctga cggatgcagc tcagcaggtt gttgccgcag
    11101 tggaggggaa ataatgtcca ttttaattga taaaaacacc aaggttatct gccagggctt
    11161 tactggtagc caggggactt tccactcaga acaggccatt gcatacggca ctaaaatggt
    11221 tggcggcgta accccaggta aaggcggtac tacccacctc ggcctgccgg tgttcaacac
    11281 cgtgcgtgaa gctgttgctg ctactggcgc taccgcttct gttatctacg taccagcacc
    11341 gttctgcaaa gactccattc tggaagctat tgatgcaggc atcaaactga ttatcaccat
    11401 cactgaaggc atcccgacgc tggatatgct gactgtgaaa gtgaaactgg acgaagccgg
    11461 cgttcgtatg atcggcccga actgcccggg cgttatcact ccgggtgaat gcaaaatcgg
    11521 tatccagccg ggtcacattc acaaaccggg taaagtgggt atcgtttccc gttccggtac
    11581 actgacctat gaagcggtta aacagaccac ggattacggt ttcggtcagt cgacctgtgt
    11641 tggtatcggc ggtgacccga tcccaggctc taactttatc gacatcctcg aaatgttcga
    11701 aaaagatccg cagaccgaag cgatcgtgat gatcggtgag atcggcggta gcgctgaaga
    11761 agaagcggca gcgtacatca aagagcacgt taccaagcca gttgtaggtt acatcgctgg
    11821 tgtgactgcg ccgaaaggca aacgtatggg ccacgcgggt gcgatcattg ccggtgggaa
    11881 agggactgcg gatgagaaat tcgctgctct ggaagccgca ggcgtgaaaa ccgttcgcag
    11941 cctggcggat atcggtgaag cactgaaaac tgttctgaaa taaatatctg taataagaaa
    12001 tagccctcgc cgcttccctc tacaggaatg gcgaagggct gtcggtttcg acatggttgg
    12061 ccatcgtatg atggcctttt ttgtgcttat cgcgatgatt ttcgctgcgc tatcagggta
    12121 aatttatagt catcggtatt aaaagcgttg cggctatatt caaacacccg accatcaact
    12181 aaatatccac gcgatacttt ttcaagaatc ggctttgtct ggctgatatt aagcagacgg
    12241 ctcatctctt cggttggcat cagaggaatg atttcctgtt cgctacgatc gataaccatc
    12301 ttcttcactt cttcaataaa gtgatatttc gaattttcca tgacctgcca ggtgagatcc
    12361 gggaacaacg caagcggcat ccaggtttct tccagcgcca ttggcttttg cttgcgatag
    12421 cgcacgcgct tcacatgcca cacacgatcc tgcgcggtga tttgtagctg ttgctgaaga
    12481 aaatcgtcag ccggaatcac ttcaaatatc aggacttcac tgtgtgtatc gacgtgacgg
    12541 tccgacagtt tttcatcaaa actggttaac tgaaaaatat cgtaattgac ccgctcttct
    12601 ttgacgtaag tcccgctgcc ctgaatgctt tcgaggatct gctgctcgac tagctggcgc
    12661 aaagcctgac gcaccgtaac ccggctgacg ccaaactctg tttgtagcgc tgattcagtg
    12721 ggtaacgcat cgccaggttt aagctcgcca cgcgcaattt gttcacgaat gcgatcggca
    12781 atctgccggt ataagggctt gtgtcccatt tttagtatct cattaatacg aatttagcca
    12841 ttatgcccga taaattcatc ctgtaaataa tgcaaataca atacaaataa tttcaatcaa
    12901 gtgaaattga tcatataatg gtattgtttt atcgggcaca ctggcgcgac tataaaaacg
    12961 atcaagtgag gatcatgatg aatctgacga ctctgaccca ccgcgatgcg ttgcgtctga
    13021 atgcgcgctt taccagccgt gaagaggcca tccacgcgtt gactcaacgt cttgctgctc
    13081 tggggaaaat ttccagtact gagcaatttc tggaagaagt gtatcgccgt gaaagccttg
    13141 gcccgaccgc cttaggtgaa gggttggctg tgccgcatgg caaaactgct gcggtaaaag
    13201 aagcggcgtt tgcggtcgcc acactcagcg agccgcttca gtgggaaggc gttgatggcc
    13261 cggaagcagt tgatttagtg gtgctgctgg cgattccccc caatgaagcg ggtactatgc
    13321 atatgcaact gctgacagcg ctgaccacgc gccttgcgga tgatgagatt cgggcgcgta
    13381 tacagtcggc gacgacgcct gatgagttgc tctcggcgct ggatgacaag ggaggcacgc
    13441 aaccttctgc ctctttttcc aacgcgccaa ctatcgtctg cgtaccggcc tgtccggcgg
    13501 gtattgctca cacctatatg gctgcggaat atctggaaaa agccggacgc aaactcggcg
    13561 taaatgttta cgttgaaaaa caaggcgcta acggcattga agggcgttta acggcggatc
    13621 aactcaatag tgcaaccgcc tgtatttttg cggctgaagt cgccatcaag gagagtgagc
    13681 gttttaatgg cattcccgcg ctttcagtgc ctgttgccga gccgattcgc catgcagaag
    13741 cgttgatcca acaagcgctt accctcaagc gtagcgatga gacgcgtacc gtacagcaag
    13801 atacgcaacc ggtgaaaagt gtcaaaacgg agctgaaaca ggcactgttg agcggaatct
    13861 cttttgccgt accgttgatt gtcgcggggg gcacggtgct ggcggtcgcg gtattactgt
    13921 cgcaaatctt cgggctacaa gatctgttta atgaagaaaa ctcctggctg tggatgtacc
    13981 gcaagctggg cggcgggctg ctcggaattt tgatggtacc ggtgctcgcg gcctatactg
    14041 cctattctct ggcagataaa ccggcgttag cgccaggctt tgcggctgga cttgccgcca
    14101 acatgatcgg ctccgggttt ctcggcgcgg tcgttggcgg attgatagcc ggttacttga
    14161 tgcgctgggt gaaaaatcac ttgcgtctta gcagtaaatt caatggattc ctgacttttt
    14221 atctctaccc ggtgctcggt acgttgggag cgggcagtct gatgctgttt gtggtgggag
    14281 aacctgtcgc atggatcaat aactcgctta ccgcctggct gaacggtctg tcaggaagta
    14341 acgcgctgtt gctgggtgcc attttcggtt ttatgtgttc ctttgatctt ggagggccag
    14401 tgaacaaagc cgcttatgca ttctgcctgg gcgcaatggt gaacggcgtt tacggcccgt
    14461 atgccatttt cgcctccgtc aaaatggttt cggcatttac cgtaaccgct tccacgatgc
    14521 tcgcaccgcg cctgtttaaa gagtttgaaa ttgagaccgg gaaatccacc tggctgttag
    14581 ggctggcagg tattaccgaa ggggcgatcc cgatggcgat tgaagatccg ctgcgggtta
    14641 ttggttcgtt tgtgctgggc tctatggtaa cgggcgctat tgtcggtgcg atgaatatcg
    14701 gcctttcgac acccggtgcc ggcattttct cgctcttttt acttcatgat aatggcgcgg
    14761 gcggtgttat ggcggcaatt ggctggtttg gtgcggcatt ggtgggggct gcaatctcga
    14821 ctgcaattct cctgatctgg cggcgtcacg cggttaagca tggcaactat ctgactgatg
    14881 gcgtaatgcc ataaacaaaa aggaaacgac gatgaaagcg gtatctcgtg ttcacatcac
    14941 cccgcatatg cactgggatc gagagtggta tttcaccacc gaagagtcac gtattctgct
    15001 ggtcaataat atggaagaga tcctgtgccg actggaacag gacaacgaat acaaatatta
    15061 cgtactcgac gggcaaacgg cgatcctcga agattatttc gcggtgaaac cggaaaacaa
    15121 agaccgtgtg aagaaacagg tagaagccgg caagttgatt atcggcccct ggtataccca
    15181 gaccgatacc acgattgttt ctgcggaatc catcgtccgt aatctgatgt acggaatgcg
    15241 tgactgcctc gcgtttggcg agccgatgaa aataggttat ttaccagatt cctttggcat
    15301 gtccgggcaa ctgccgcata tctacaatgg atttggcatt acccgcacca tgttctggcg
    15361 cggatgttcg gagcgccacg gtactgataa aaccgagttt ttgtggcaaa gcagtgacgg
    15421 tagcgaagtg acggcgcagg tgctgccgct gggctacgcc ataggtaagt acttacctac
    15481 cgacgaaaac ggattacgta aacgcctcga cagttatttt gacgtgctgg aaaaagcgtc
    15541 tgtaaccaaa gagattttgc tgccgaatgg tcatgaccag atgccattgc agcaaaatat
    15601 cttcgaagtg atggataagc tacgtgagat ctaccctcaa cgtaagtttg tgatgagccg
    15661 ctttgaagag gtatttgaga agatcgaagc gcagcgtgaa agtctggcca ccctgaaagg
    15721 tgaatttatc gatggcaaat atatgcgcgt acatcgcacc atcggttcca cgcgcatgga
    15781 tatcaaaatt gcccacgcac gtattgaaaa taagattgtt aatctgctgg aaccgctggc
    15841 aacgctggcc tggacgttgg gttttgaata ccaccacggc ttgctggaga aaatgtggaa
    15901 agagatctta aaaaatcatg cccacgacag tatcggttgt tgttgcagtg acaaagttca
    15961 tcgcgaaatt gtcgcccgct tcgaactggc tgaagacatg gcggataatc tgctgcgttt
    16021 ctacatgcgc aaaattgccg ataacatgcc acagagtgat gccgacaaac tcgtgctgtt
    16081 taacctgatg ccctggccgc gggaagaagt tattaacacc actgtgcggc tgcgcgccag
    16141 ccagtttaat ctacgagacg atcgcggtca gcctgtaccg tattttattc gccatgcccg
    16201 tgagatcgat ccaggcctaa tcgatcggca aatagttcat tacggtaatt acgatccctt
    16261 tatggagttt gatatacaga tcaaccagat tgtcccttct atgggctatc gcacgcttta
    16321 tatcgaagcg aatcagcctg gcaacgtgat tgcggcaaaa agtgacgctg aagggatact
    16381 ggaaaatgct ttctggcaaa ttgcgctcaa tgaggatggt tctctgcaac tggtagataa
    16441 agacagcggt gtgcgctatg accgagtatt gca
//
LOCUS       DADKRT010000094        15967 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.095, whole genome shotgun sequence.
ACCESSION   DADKRT010000094 DADKRT010000000
VERSION     DADKRT010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15967
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.095"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..244)
                     /locus_tag="JQ356_002496"
     CDS             complement(<1..244)
                     /locus_tag="JQ356_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000100289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY4622551.1"
                     /translation="MSSWLAMLQDAAEMFVFLAVELSLLFIVISAGVSLIRQKVPDHK
                     IQQMMGARKGRGYLLAALLGAVTPFCSCSTIPMLRGL"
     gene            351..647
                     /locus_tag="JQ356_002497"
     CDS             351..647
                     /locus_tag="JQ356_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY4622552.1"
                     /translation="MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGI
                     PGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA"
     gene            complement(781..1206)
                     /gene="arsC"
                     /locus_tag="JQ356_002498"
     CDS             complement(781..1206)
                     /gene="arsC"
                     /locus_tag="JQ356_002498"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-dependent arsenate reductase"
                     /protein_id="HAY4622553.1"
                     /translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDEL
                     VKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLG
                     TRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK"
     gene            complement(1219..2508)
                     /gene="arsB"
                     /locus_tag="JQ356_002499"
     CDS             complement(1219..2508)
                     /gene="arsB"
                     /locus_tag="JQ356_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite/antimonite:H(+) antiporter ArsB"
                     /protein_id="HAY4622554.1"
                     /translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
                     DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
                     AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
                     NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
                     KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLR
                     GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSI
                     MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
                     KNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL"
     gene            complement(2563..2916)
                     /gene="arsR"
                     /locus_tag="JQ356_002500"
     CDS             complement(2563..2916)
                     /gene="arsR"
                     /locus_tag="JQ356_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HAY4622555.1"
                     /translation="MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQ
                     PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRN
                     LARQNCSADSKNICS"
     gene            3655..3738
                     /locus_tag="JQ356_002501"
     CDS             3655..3738
                     /locus_tag="JQ356_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Damage inducible protein"
                     /protein_id="HAY4622556.1"
                     /translation="MIDKAIIVLGALIALLELIRFLLQLLN"
     gene            complement(3792..5144)
                     /gene="gorA"
                     /locus_tag="JQ356_002502"
     CDS             complement(3792..5144)
                     /gene="gorA"
                     /locus_tag="JQ356_002502"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HAY4622557.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
                     LGKNNVDVIKGFARFVDAKMLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGF
                     FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
                     VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSEHLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
                     "
     gene            complement(5216..6058)
                     /locus_tag="JQ356_002503"
     CDS             complement(5216..6058)
                     /locus_tag="JQ356_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HAY4622558.1"
                     /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
                     ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATASW
                     IVPE"
     gene            6261..8303
                     /gene="prlC"
                     /locus_tag="JQ356_002504"
     CDS             6261..8303
                     /gene="prlC"
                     /locus_tag="JQ356_002504"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HAY4622559.1"
                     /translation="MTNPLLTPFELPPFSKILPEHVVPAVTQALNDCRENVERVVAQG
                     APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
                     HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
                     NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
                     FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
                     PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
     gene            8311..9063
                     /gene="rsmJ"
                     /locus_tag="JQ356_002505"
     CDS             8311..9063
                     /gene="rsmJ"
                     /locus_tag="JQ356_002505"
                     /EC_number="2.1.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709277.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase
                     RsmJ"
                     /protein_id="HAY4622560.1"
                     /translation="MKICLIDETGAGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
                     RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
                     AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
                     ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
                     RPDYAPPLANVTTPNAVVTKGHRFDIYAGTPV"
     gene            complement(9112..10581)
                     /gene="dtpB"
                     /locus_tag="JQ356_002506"
     CDS             complement(9112..10581)
                     /gene="dtpB"
                     /locus_tag="JQ356_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HAY4622561.1"
                     /translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
                     LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
                     LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
                     SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
                     LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
                     EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINSVSFQALNPFWVVLASPILAGIYT
                     HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
                     ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
                     LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
     gene            complement(10899..11333)
                     /gene="uspA"
                     /locus_tag="JQ356_002507"
     CDS             complement(10899..11333)
                     /gene="uspA"
                     /locus_tag="JQ356_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HAY4622562.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            11724..12059
                     /gene="uspB"
                     /locus_tag="JQ356_002508"
     CDS             11724..12059
                     /gene="uspB"
                     /locus_tag="JQ356_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HAY4622563.1"
                     /translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
                     DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
                     SLIALMIWH"
     gene            complement(12303..13802)
                     /gene="pitA"
                     /locus_tag="JQ356_002509"
     CDS             complement(12303..13802)
                     /gene="pitA"
                     /locus_tag="JQ356_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HAY4622564.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
                     VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
                     HPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
                     DQRSQMRRIMLCVSDTIDKVVKIPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
                     SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
     gene            14034..15236
                     /locus_tag="JQ356_002510"
     CDS             14034..15236
                     /locus_tag="JQ356_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY4622565.1"
                     /translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
                     CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG
                     GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
                     ENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
                     QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIAAKSS"
     gene            complement(15551..>15967)
                     /locus_tag="JQ356_002511"
     CDS             complement(15551..>15967)
                     /locus_tag="JQ356_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HAY4622566.1"
                     /translation="QTRNTFSTKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLAP
                     GIILIYLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQ
                     TDMGYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK"
BASE COUNT         4057 a         4074 c         4170 g         3666 t
ORIGIN      
        1 acaatccacg taacatgggt attgtcgagc aactacagaa cggggtaacg gctcccaaca
       61 gagcagccag gagatagcct ctcccttttc tggcccccat catctgctgg attttatggt
      121 ctggcacctt ttgtcttatc aggctgacac cggcactaat cactataaac agcaacgaaa
      181 gctcgacggc gagaaacaca aacatctctg cggcatcttg cagcatcgca agccaactac
      241 tcatacgtaa cctcattgga taaatctata tttccagaat aatcgaaatg aaattcagat
      301 caagatattt ctggtattat cgaaatatca accagacaga ggggtgtcat atgcagttgg
      361 aagaagtcgc taaagcgctg aaagagctag gtcacccgac ccgtttgttc atatttaaac
      421 atcttgtcaa agccggggaa caagggttgc cggtcggtga gttgcaaaag cagcttggga
      481 tacctggctc cacactcagc caccatatat cagcactggt atcggtagga ctggtcaaac
      541 aaaaccgtga gagtcggacg ctgatgtgtg tttcgcaata cgcaatgctg gaagcgataa
      601 ttgaattctt acgcgaggag tgctgcgtaa atagcaaaat tgcctgatgc gctacgctct
      661 acatatttca tgccatatat tgaatttgca cggttttgta ggtcggataa gacgcgttag
      721 cgtcgcatcc gacataaaca aagcgcactt taccaactat cggcagtgga tatcgccgct
      781 ttatttcagg cgcttacccg cttcatcaac cactttctcg ccatcttcct tggagaatgc
      841 gcctttttgc gcatctggca gaatttccag caccacttct gaagggcggc acaggcgagt
      901 tcccagcggc gtcaccacaa tcgggcgatt aatcagaatc gggtgctgaa gcataaagtc
      961 gattaaccga tcgtcagtaa atttatcttc cgcaaggccc agctcctcat acggttcgac
     1021 gtttttacgc agcagcgcgc gtacggaaat ccccatatcg gcaatgagtt tgaccagttc
     1081 atcgcgcgtt ggcggagttt ccagataatg gataatggtc ggttctgtgc cgctgttgcg
     1141 gatcatctcc agcgtattac gcgacgtgcc gcaggccggg ttgtgataaa tggtaatgtt
     1201 gctcatatca gtatctcatt acaaagtgaa agagagacgt agcgccagcg cagccagcgt
     1261 cacaaacagc acaggcaggg tcatgataat ccctgtacgg aagtaatatc cccagctgat
     1321 agtcatattc ttctgcgaaa gtacgtgcag ccagagtagt gtagccaggc taccaattgg
     1381 ggtaattttc ggtcccaaat cgcagccaat cacattggca taaaccatcg cttctttgat
     1441 aacgccagat gccgtgctgc catcaatgga caacgcgcca accagtaccg tcggcatatt
     1501 gttcataata gaagagagga aggcggtgag gaatccggtg ccgagcgtcg cggcccacag
     1561 gccgttatcc gccagcacgt tgagtacgcc agaaagatat tccgttaatc cggcattgcg
     1621 caggccataa accaccagat acatgccgag cgagaagatg acaatttgcc agggggcacc
     1681 gcgcaggact ttacccgtat taatcgcatg accgcgttta gcgacgacaa ataatatcag
     1741 cgcgcccaca gctgcaatgg cgctcaccgg aatgccgagc ggttccagga cgaaaaatcc
     1801 caccagcaga agcagtaaaa caacccagcc agttttgaac gtagcaggat ctttgatcgc
     1861 ttctgcggga gatttcagca gcgccatatc gtagttctgc ggaatatctt tgcgaaaata
     1921 gagatgtagc atcaccagcg tggcaacaat cgcggcgata tccaccggca ccatcaccga
     1981 ggcgtattcg cgaaagccga ggccaaagaa atcagcggaa acgatattca ccaggttgga
     2041 gacaataagc ggcaggctgg cggtatcggc aatgaatccg gccgccatca cgaacgccag
     2101 cgtcgtgcct ttactgaatc ctaaagccag cagcatggcg atgacaatcg gcgtcaaaat
     2161 aagcgctgcg ccatcattgg caaacagggc ggcaacggca gcaccgagca ggacaatcca
     2221 ggtaaacagc aagcgaccac gaccattacc ccagcgtgag acgtgcagcg ccgcccattc
     2281 aaaaaagccg gactcatcca gcagcaggct gatgataatg acggcgataa acgcagccgt
     2341 cgcgttccag acgatattcc acaccaccgg aatatcaccc ggatggacca cgcccgtaac
     2401 taacgctagt actgcgccga gcgttgcact ccagccgatg cctaaacctt tcggctgcca
     2461 gataaccaat acaatggtca ggacaaagat agcgcctgcc agtaacataa tgcctcctgg
     2521 ataaaacaca tgcgaaaata catatgtgtt tagctaaatt ttttaactgc aaatgttctt
     2581 actgtctgcg gaacagtttt gtcgagccag gttgcggaca attgcctgaa tcttttcctg
     2641 ttcacatcgc caggcttcat caattatttt cgccgcccat gctggaatat gcggcgataa
     2701 gcggtaatga acccatttac cttgcttgcg gtccagcaat agcccgcttt cacgcagcaa
     2761 tgccaggtgg cgggagatct tgggctgcga ctggtcgaga gcagtgcaga gatcgcagac
     2821 gcataactct cccagttcgc tgagcagtaa aacgatgccc agacgggttt catcagcaag
     2881 aattttgaac aattggatgg gtaacagaaa tgacatattg cgctcctgat tgttgcaggt
     2941 agtgtctctc ttcgaagcgg ataagtcaaa aacatatatg atttaacgaa tgtgtaagtg
     3001 cagaggaagg taataggtgt gaattttgag ttggctattc atttgaaagg aggtctgaat
     3061 caggacgtaa aaaaaccgac tttgcgtcgg ttttttactt tccagccctg agttggtggc
     3121 tctggctgga gtgagagagt tcttatctaa cagctcaata ctattagcca gtggctaaca
     3181 ttgcaagaat tagcgatttc ttcagctggc ggagggagca cttcggtata tatcgcagtg
     3241 acgatttata tactttcact gggtcatcgt catattaagc cttgtccgaa tccggatgta
     3301 aaaaaccgac tttgcgtcgg ttttttactt tccagccctg agttggtggc tctgactgga
     3361 gtgagatagc catcatctaa cgcatcaatg ctaataccat actgaaacta ttgcaaggac
     3421 gtgctggttt tataacctgc atgtactgta tgattatcca gttagctctg aggcattttc
     3481 actctggcaa tgcgcataaa cgctttcaaa gtcctggtca gaagtacggg tggtgccgtt
     3541 aactgatgct ctggccggag tgagagagtt cttatctaac aatgagacat gcgccgtgac
     3601 aggcagtgga tgagtaagcg gatgcattct cactccatcg catggagaaa acgggtgatt
     3661 gataaagcaa tcatcgttct aggggcgtta attgcgctgc tggaactgat ccgctttctg
     3721 cttcagcttc tgaactgata gcggaaacgt aattaagggc taagagcaca ctactcttag
     3781 ccctttaaca tttaacgcat tgtcacgaac tcttctgccg ccgttgggtg aatggcgacg
     3841 gtattgtcga agtctttttt ggttgccccc atcttcagcg ccaccgcgaa gccctgcaac
     3901 atttcgtcca taccaaagcc aatgccgtga ataccgacaa tcttctcttc cgatccaacg
     3961 cacaccagct tcatgcggca cggctggcgg tgagtggtga cggcggtata catcgcggtg
     4021 aaagaggatt tatacacttt cacctgatcg tcgccatact gctcgcgcgc ctgcggttcc
     4081 gttaaaccaa cagtaccaat cggcggatgg ctgaagacca cggtcggaat gttgctgtaa
     4141 tccagatgct catccggctt gttattaaac aggtgttcag agagacggcg acccgctgca
     4201 actgccaccg gtgtcagctc cactgcaccc gtgttatcgc ccaccgcgta aataccttca
     4261 atgttggtgt tttgatattt atcgacgacg atatagcctt tttcgttggt tttaacgcca
     4321 gcggcttcga ggttgatgtt gtcattggca ggctcgcgac caatcgccca aatcaggcaa
     4381 tccaccgttt cactgcgacc atcttccagc tccagcgtca ggctaccatc ggcatttttc
     4441 actaccgctt tcgggatggc gttggtgtgc agctgcgggc cttcggcgtt catcacttcg
     4501 accagcgttt cggaaatcat cgggtcgaag ctgcgcagcg gcgcatgttt acgcacaaac
     4561 agatgcgttt tcgcgccgag gccgttaatc acgcccgcca gctcaacggc gatgtaaccc
     4621 gcgccaacaa ccgccacgcg ctctggcaaa gcaggaaggg cgaagaagcc atcagaatca
     4681 ataccgtatt ccacgcccgg aatatccggg tggctcggac gaccgcctgt ggcgatcaga
     4741 atatgatcgg ccgtgatggt ttcgccgttt acctccagca ttttggcatc aacgaagcgg
     4801 gcaaagcctt tgattacatc aacgttattt ttaccgagca cgttttcata ggaagtatga
     4861 atacggtcga tataggcggt acggctggcg atcaacgttt cccagttgaa cttgttgatg
     4921 gtggtatcga aaccataatc agggccgtac atatggatcg cttcacggat ttgcgccgcg
     4981 tgccacatca cttttttcgg cacgcagccg acgttcacgc aggtgccgcc cagctctttg
     5041 gcttcaatca gtgcgcattt ctggccgtac atagccgcgc ggttgatgga ggctataccg
     5101 ccgctgccgc cgccgatggc gatgtaatca tagtgtttag tcatgacaga gtgtccttat
     5161 cgttgattac cgcgattgta gcgcgagacg taataggtgc cagcaatggc tgcaattact
     5221 ccggcacgat ccagcttgcg gtggcgtgcc cggtgcctgc cggaaccagt ttgctgtgca
     5281 gccacggcag cacgttattc atctgctgtt ccagtttcca cggcgggtta atcacaatca
     5341 tgccggaagc ggtcatgcca cggcgatcgc tgtctggcag taccgccagt tcaatttgca
     5401 gaattttgcg aataccggtc gcttccagat cgtggatcat gcgcttaatt tgctgacgca
     5461 gcaccaccgg ataccacagt gcgtaagtac cagtggcgaa acgtttgtaa ccttctgcta
     5521 tcccgctgac caccgcctga tagtcggttt tcatttcata cggcgggtcg ataaggatta
     5581 aaccacggcg ggaaaccggc ggcagtttgg ccttaagctg ctggaaacca tcggcttttt
     5641 cgacgcgcgc acggctgtct ttctgaaatt cagaacgcag caacgggtaa tcgctcgggt
     5701 gcagttcggt cagttgcagg ctgtcttgtt cgcgcagtag ctggcgagca atcaatggcg
     5761 aaccggggta gtaacgcaac tgaccgctac ggttgaagtg ttttaccaca ttgatgtacg
     5821 cctccagttc tgcgggcaaa tcgtcctgct gccagatacg ggcgatgcct tcgagatatt
     5881 cgccggtacg ctcggcatgt tcgctgccta actgataacg cccggcccct gcgtgggtgt
     5941 cgagatagag aaacggttta tctttctctt tcagcgactc gatgatcagg ctctgaacgg
     6001 tatgtttaag gacgtcggcg tggttgccag cgtgaaagct gtggcgataa ctgagcatgg
     6061 gtaaaggtgt tccggtaagt aaaaatcggc ccgtattcgg ggcgcacaaa agcgtatcag
     6121 gacagtatac cgaaaagagg ccgccgccgc gaaagcgtaa cgtttctcat tgaaattcac
     6181 tacacttaac cccatgctac acacattatg taaagcgcct gttgagcgct tccttaacct
     6241 ctttaaccag gactgcgcga atgacgaatc cgttactgac tccctttgaa ttgcctccgt
     6301 tttctaaaat tctcccggaa catgtcgttc cagccgtgac tcaggcgctg aacgattgcc
     6361 gcgaaaatgt ggagcgcgta gtagcgcaag gggcaccgta cacctgggaa aatctctgcc
     6421 agccgttggc ggaagtggac gatgtgttgg ggcgtatctt ctccccggtc agccacctga
     6481 actcggtgaa aaatagcccg gaactgcgtg aagcctacga gcaaaccctg ccgctgctgt
     6541 cggaatacag cacctgggta gggcaacatg aagggctgta taaagcgtac cgcgacctgc
     6601 gcgatggcga tcattacgcc acgctgaaca cggcgcagaa gaaagcggtt gataacgccc
     6661 tgcgtgattt tgaactctct ggcataggtc tgccgaaaga gaaacagcag cgttacggcg
     6721 aaattgcgac ccgtctttct gaactgggca accagtacag caacaacgtc ctcgatgcga
     6781 caatgggctg gaccaaactc gttaccgacg aagcggagct ggcggggatg cctgaaagcg
     6841 cgctggctgc ggcaaaagcc caggccgaag cgaaagagct ggaaggctac ctgctgacgc
     6901 tggatatccc aagctacctg ccggtaatga cctactgcga caaccaggcc ttgcgtgaag
     6961 agatgtatcg cgcttacagc acccgcgcct ccgatcaagg cccgaacgcc ggtaaatggg
     7021 ataacagcaa ggtgatggaa gagatcctcg ctctgcgtca cgaactggcg caactgctgg
     7081 gctttgaaaa ctacgccttt aaatcccttg ccactaaaat ggcagaaaac ccgcagcagg
     7141 tgctggattt cttaaccgat ctggcaaaac gcgcgcgtcc gcaaggcgaa aaagagctgg
     7201 cacaactgcg cgccttcgcc aaagcggaat ttggcgtcga tgagttgcag ccgtgggata
     7261 tcgcgtacta cagcgaaaaa caaaaacagc acctctacag catcagtgac gaacagctgc
     7321 gtccgtactt cccggaaaac aaagcggtta acggcctgtt tgaagtggtg aaacgtattt
     7381 acggcatcac cgctaaagag cgtaaagatg ttgatgtctg gcatccggat gtacgtttct
     7441 tcgaactgta tgacgagaac aacgaactgc gcggcagctt ctacctcgat ctgtatgccc
     7501 gtgaaaacaa gcgcggcggg gcgtggatgg atgactgcgt aggccagatg cgtaaagctg
     7561 acggttctct gcaaaaaccg gtcgcgtatt tgacttgtaa cttcaaccgc ccggtaaatg
     7621 gtaaaccggc gctgttcact cacgacgaag tgatcaccct gttccacgag ttcggtcacg
     7681 gcctgcacca tatgctgacc cgcatcgaaa ccgctggtgt ttccggtatc agcggtgtgc
     7741 cgtgggatgc ggtcgaactg ccgagtcagt ttatggaaaa ctggtgctgg gagccggagg
     7801 cgctggcgtt tatctctggt cactatgaaa ccggcgaacc gctgccgaaa gagttgctgg
     7861 ataaaatgct ggcggcgaag aactaccagg cggcgctgtt tattctgcgc cagctggagt
     7921 tcggcctgtt cgatttccgc ctccatgccg agttccgccc ggatcagggt gcgaaaatcc
     7981 tcgaaactct ggcagaaatc aagaaactgg ttgccgtagt accgtctcca tcctggggcc
     8041 gtttcccgca cgctttcagc catattttcg ccggtggtta tgccgcaggt tactacagct
     8101 acctgtgggc tgacgtactg gcggcagatg ccttctcgcg ctttgaggaa gagggcattt
     8161 tcaaccgtga aaccgggcag tcgttcctcg acaacattct gagccgtggc ggttcagaag
     8221 agccgatgga tctgttcaaa cgcttccgtg gtcgtgaacc gcagctggat gcgatgctgg
     8281 agcattacgg cattaagggc tgatcattca gtgaaaatct gcttaattga tgaaacaggc
     8341 gccggagacg gcgccttatc tgttctggcg gcccgctggg ggctggagca cgatgaagac
     8401 aacctgatgg cgctggtgtt aacgccggaa catctggaat tgcgcaagcg tgatgagcca
     8461 aaacttggcg gcatctttgt tgattttgtt ggcggagcga tggcgcaccg acgcaaattc
     8521 ggcggtggtc gcggtgaggc ggtggcgaaa gcggtgggca ttaaaggcga ttatttgccg
     8581 gatgtggtgg acgccaccgc agggctgggg cgcgatgcct ttgtactggc ttcagtcggc
     8641 tgccgcgtgc ggatgctgga gcgtaatcca gtggttgccg cgctactcga cgacggcctg
     8701 gcgcgtggtt atgcggatgc ggaaatcggc ggctggttgc aggagcggtt gcagttaatt
     8761 cacgcctcca gcctgacggc gctaaccgat attaccccac gcccgcaggt ggtctatctc
     8821 gatccgatgt tcccgcataa gcagaaaagc gcgctagtga aaaaagagat gcgtgtcttt
     8881 cagtcgctgg tgggaccgga tcttgatgcc gatggattac tggagcctgc acgcttgctg
     8941 gcgaccaaac gcgtggtggt aaagcgcccg gactacgcgc caccgctagc gaatgtcacc
     9001 acgccaaacg cggttgtgac taaagggcat cgctttgata tctatgcagg tacgcccgtg
     9061 taaaagtaaa gcagggtagc gataacgcta ccctgctttc tgcaagaata attaatggct
     9121 ttccggcgtc gcaatcatgc gtttcagcca cggcaccatc aacagcatca ctactgcaac
     9181 gcccagcgtg accagaccaa tcttaccaaa cacgttggta tagacgggca acgtctcaag
     9241 cggatcggta atgttgtccg gcaccgcggt aaatgttgcc acatagccgc ccagcaagaa
     9301 cgcggcagcc tgcgtcagga accacatccc gagaataaag cccatcaaat gctgcggcac
     9361 cagggcagca atcatcgcca ggccaagggc gctaataaac agttcaccta agctctggaa
     9421 taagtacacc agcacgataa accatggcga tgtcagccct tgtgcatccg caaaccacat
     9481 tcccgcagct gccgccgtca aaaagcccag tgagcacata aacatgccga gagtaaattt
     9541 catcggcatc gagaggtctt tgcctttgtt acccagatgc gtgtaaatgc ctgccagtat
     9601 tgggctggcg agtaccaccc agaacgggtt aagcgcctgg aagctgaccg agttgatgga
     9661 aaaaccgaga atttcatgat gcacgttgtt gatggcaaag aagttcagcg atgttggcat
     9721 ctgggcgtag agaatgtaaa acaccaccgc ttcgagcatc aggacaaagg cgacaaacat
     9781 tttattgcgc ccggttttat ccagcttgaa tgcctgacga aagaagatga tggtgacgac
     9841 gatggagaga acaatcagca ccagattggc gacttctacg ttgtgcatca gccatgcaca
     9901 tacgaagatc atcaccacgc tgccaagtaa tacgtacaac agtttgctga agctcatcgg
     9961 cttgaagtcg ggttcagaac caatgtcttt caccattcca cgacaggcga tgtaaaccag
    10021 taatgcgata attaaccccg ccccgcacag gttgtaggtg actgaataac cgaatctatc
    10081 agcgatcaca ggggccagcg ataacgctat caacgagccg atattgatcg acatatagaa
    10141 cagggtgaat gcgccatcaa gccgcggatc tttcggcgga tagcacttcg aaagcaagct
    10201 ggctgggtta gctttaaaca ggccgttacc gacagcgata gtccccaggg cgatgaaaat
    10261 caggtcaggc ttaagtagcg acatgccggt catgaagtag ccaatcgcca gcacaagtgc
    10321 tccgagaaca atggtgcgtt tggtccccag caggtggtcg ccgacatagc cgccaatgga
    10381 aatgaggcca tagaccagcg cagcaaaagc accaaaagtg acaaaagcct gctcttgcga
    10441 gaatccaagc tgtttaacga agaaaaccgc cagtacgccc tgcacgccgt agtagccgaa
    10501 tcgctcccat aactcgacaa aaaagatcat gaaaaatggg cgaggttgct gcagcatccc
    10561 catgggtgtt gttgtattca tatttattaa ccttccaata ccatcctgaa aagtatgaac
    10621 gcgtaaggga taacgcgcga aaaagtttac atctgtcaga gattcttaat attgatgcgg
    10681 tgaatggatt aatacactat tacaacagaa aataaccagc taatcacact aatgatggaa
    10741 aatatgatgg tgttaaatgt tgtattggca ggagattttg attgcgtacg cagatcgtag
    10801 gccagataag gggtttacgc tgcatcaggt aacaaggcgc gccaaaaagc aaaacgcccg
    10861 catatgcggg cgttcaggaa cacgtcgtgg agggaagatt attcttcttc gtcgcgcagc
    10921 ggaacaatca gcatatcaac gtgaacggtg ttgatcagct gacgtgcgga agacatcagt
    10981 ttgctccaga agtcctggtg gtgaccacaa accaccagat ccatatcgta tttcttgatt
    11041 gcatcgacca gaacctggcc caggtcgccg ctgccgctca gggtttcagt gattgggtag
    11101 cctgcattag tggaaagctc ggtcagcgca tgatgtgtct cttcagagat gcgtttctgc
    11161 atatcaccca gattcacatc aataagcccg gtgtataggt cagagtagtt tacatctacg
    11221 tggatcagag aaactttcgc attgtagggg cgagccatag agactgcttt ctctaccaga
    11281 actttgcttt ccggggagag atcgaccgcg atgagaatgt gtttataagc catagtgtta
    11341 ctccttccat aaagttgtcg atgactggcc agctagcgtt tcttgtgccg ttacgtcacc
    11401 cgcgtcctgc gaactacgtg cgcggggcta acccagccgt aaagattcag tgttaagacc
    11461 atccttacct tatagcgacc cggatgatcc gtcaatccgc cttgcttacc cgttagataa
    11521 acaaattttc gacatgaata tattgatagt ggttaacctt ctggaaaaaa aacaacctga
    11581 tctcctacac tatctataga gccgctcgga tgttggtcac cacaaaagcg gtttctccag
    11641 gacctggtgt taactgattg gcagcgtatc gggagcggta gccccggggt ggaactccgc
    11701 gggcaggtcg ccggggagga ggtatgataa gcaccgtcgc attattttgg gctttatgtg
    11761 tcgtttgcat tgttaacatg gcgcgctatt tctcatcact acgcgcgttg ttagtggtac
    11821 tgcgtaactg cgatccattg ctctatcaat atgttgatgg agggggcttt tttacctcac
    11881 atggccaacc caacaaacag gtgcgtctcg tttggtatat ctatgcccaa cgttatcgcg
    11941 atcatcacga tgatgagttt attcgccgct gtgagcgggt gcgtcggcag tttattctga
    12001 ctagcgcatt gtgtggtctg gtggtggtca gcctgattgc attgatgatt tggcattaag
    12061 cacttcagca ataataacgc ataaaaaaag ctggccagta aactgacccg ctcgagactg
    12121 attacaaacg caaaattgcc tgatgcgcta cgcttatcag gcctgcataa tctctgcaat
    12181 ctattgaatt tgcatgtttt tgtaggccga ataaggcgtt cacgccgcat caggcatgaa
    12241 caaagcgcac tatgtcacaa tctgaagcgg gccagctgac ccgctcgttt tggtgcgtac
    12301 gattacagga actgcaagga gagccagtac agcccgccgg aaagcagtac cgcagccgga
    12361 agggtaaaca cccaggccat cagaatgctg gtcacggttt tacgctgtaa gccgccacca
    12421 tctaccacca tcgtccccgc gacagaagag gagagtacgt gagtagtgga aaccggcatc
    12481 ccggtataac tcgccaggcc gatagacact gccgccgtca tctgggcaga catcccctga
    12541 gcgtaggtca tgcctttctt accgattttc tcaccgatag tcgttgccac acgacgccag
    12601 ccaatcatcg taccgatacc taacgccagc gcgaccgcca tgatgatcca caccggtgca
    12661 tactcgatgg tgctaagcat gtcggacttc agtttcttca acaggcgctg atcgtcagca
    12721 ctcacgccag gtatcttcac tactttgtcg atagtgtcag aaacgcacag cataatgcgg
    12781 cgcatctggc tacgttgatc aagcgacagc ttgtcgtagc tttccacatc ggtagttaac
    12841 atacctttca ggcggttgag cgcgttaatg gtattcgacg gatggcaatg gaactccgcg
    12901 ggttgcgttg cgccagcttc cggagccggt actaactgat cagcaccggt agcctgtttc
    12961 agcagcgcag gatgctgctc aaagtaagct tcgacgttgt tgatggcatc acgggtacgg
    13021 gtgatttcgt agccagtggc attcatattc accacgaagc ctgctggtgc gacaccaatc
    13081 aataccaaca taaccagacc aatgcctttc tgaccatcgt tcgcgccgtg cgaaaacgcc
    13141 acgccgatag cggaaaggat cagcgcaata cgcgtccaga acggcggctt tttcttgccg
    13201 tctttctttt cacgctccgc tggggtcagg tggatacggg cgcgtttctt ggtgccgctc
    13261 cagtagcgac gcagcaagaa aatcagaccg ccagcaaaca ccaggccgac aataggggaa
    13321 acaatcagag aaccgaaaat acttaatact ttcgggatat tgagtgcatc caccactgac
    13381 gtcccggtca tcaacgcatt ggttaaacca atcccgatga tcgcgccaat cagtgtatga
    13441 gagctggatg caggtaaacc aaagtaccag gtacccaggt tccagataat cgccgccagc
    13501 aacatagaga acaccatggc aaggccatga gacgatccca tattaagcag cagatccgtc
    13561 ggcagcatat gcacaatggc ataggcaaca ctcagaccac ccagcaaaac acccaaaaag
    13621 ttgaacaccg ccgccataac cacggcgagc tgagaacgca tcgcgcgggt atagataacg
    13681 gttgccacgg cgttggctgt gtcatggaaa ccattgatgg cttcgtagaa cagcacaaaa
    13741 gccagtgcaa gcaataataa cagcccggta tgcaaatcca ggccagcaaa caaatgtagc
    13801 ataggacgtt acgccatttt gaggacatga acgcggcgca ttatcagtga ctttcgcggc
    13861 gcgggcaaag tgaaatatag actttttttg atttgcctcc tgtatggatt tcactcaaaa
    13921 aataattatc ttatataatt caggcaaata cttcctttta gtaatattga tgctggtgtg
    13981 accactgagg aatctttaca attcacgctc gttttttcta agaggagcgc aacgtggaaa
    14041 ggtttgatgc cattattata ggcgctggtg cggcgggtat gttctgttct gcgctggcag
    14101 gtcaggcagg acgccgggtt ctgctgatcg ataatggtaa aaaaccaggg cgcaaaatcc
    14161 ttatgtctgg cggtgggcgc tgcaacttta ccaaccttta tgtcgaacca ggcgcttatc
    14221 tgagccagaa tccgcatttt tgtaagtctg cactcgcgcg ttttacccag tgggatttca
    14281 ttgatctggt caataaacac ggcatcgcct ggcacgagaa aacgttagga caactcttct
    14341 gcgatgactc cgcgcagcag attgtcgaca tgctggtgga tgagtgcgag aagggcaatg
    14401 taaccttcag attgcgtagc gaagtgctga gtgtggcgaa ggatgaaaca ggcttcacgc
    14461 ttgaactgaa cggcatgact gtcggttgcg aaaagctggt catcgcgacc ggtgggctgt
    14521 caatgccggg gctgggcgca tcgccgtttg gttataagat tgccgaacaa tttggcctca
    14581 acgtgctgcc gacccgtgcg ggtctggtgc cattcactct gcataaaccg ttgctcgaag
    14641 agttacaggt gctggcgggc gtggcggtgc cttccgtgat taccgctgaa aacggcaccg
    14701 ttttccgtga gaacttactc ttcacccacc gcggcttatc tggaccggcg gtgttgcaga
    14761 tttccagcta ctggcaaccg ggtgaatttg tcagtatcaa tctgctaccg gatgtggacc
    14821 tcgaaacctt cctgaatgag cagcgtaacg cacatccgaa tcagagcctg aaaaacacac
    14881 tggcggttca tctaccgaag cggttggttg aacgcttaca gcaactcggg caaatcccgg
    14941 atgtttcgct aaaacagctc aacgtgcgtg accaacaggc actgattagc acattgaccg
    15001 actggcgcgt acaacccaac ggcactgaag gctatcgcac tgccgaagtg acgctcggcg
    15061 gcgtggacac caacgaactc tcttcacgga cgatggaagc gcgcaaagtg cctgggctgt
    15121 acttcatcgg cgaagtgatg gacgttaccg gctggctggg gggctataac ttccagtggg
    15181 cgtggtcgag tgcgtgggct tgtgcgcagg atttgattgc agcgaagtcg tcctgacctg
    15241 ttacctaaag atgaaaatta ttagagccgc attaaaaatg agctaatttt gatagtggct
    15301 atcttgtgat tattttctaa tgagcccgtg aactgaaacc ctccaggctt aatataaggt
    15361 ggaaggaaag atgattgaaa actcacccag tggccagatc tttataaaat atgaacaggc
    15421 tgaaaaagac agtaactttg ttgtttttta tccttaacca ctatgcatta atgctgcgtt
    15481 atttcatgat gcctaagaaa aaccagcgtt acgcaaatgg tcaacgctgg ttttatccgg
    15541 tacgttgcaa ttatttttta gcagaacctg cttctaatat tgaaacgatt gagaacaacg
    15601 taaagcatac cgctcccaaa ccgaccaaaa cccgcgaagg aataaaatat cccatgtcgg
    15661 tctgcgccat ttccgcaaga aacgatgcca ggaaaaggca aaacaggcag gtgaagacgg
    15721 gaatcatcgg tattctgttg gctaacgaac aggtacgtct ccataccagt gccagtagcc
    15781 agacttttga gaatatgctg taacagatca ttccgaggta aataagaata atgccgggag
    15841 ccagtcgggc gcttgcatcg gaactgacta agacgtatat cccctgcagt accgtgattg
    15901 agccgagaaa aataacccaa taacaccaca gccagtgttc tttagttgaa aacgtattac
    15961 gtgtttg
//
LOCUS       DADKRT010000095        15960 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.096, whole genome shotgun sequence.
ACCESSION   DADKRT010000095 DADKRT010000000
VERSION     DADKRT010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15960
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.096"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            7..1242
                     /locus_tag="JQ356_002512"
     CDS             7..1242
                     /locus_tag="JQ356_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY4622567.1"
                     /translation="MSKLPTGVEIRGKYIRIWFMFRGKRCRETLKGWEITNSNIKKAG
                     NLRALIVHEISSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNT
                     MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT
                     VDSYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS
                     QNLWKFAVYSGLRHGELAALAWEDVDFEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL
                     LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNEKQKPYYSVS
                     SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG
                     MWIDDMNDEQIAMLNARLS"
     gene            1294..2229
                     /gene="ttcA"
                     /locus_tag="JQ356_002513"
     CDS             1294..2229
                     /gene="ttcA"
                     /locus_tag="JQ356_002513"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HAY4622568.1"
                     /translation="MQENQQITKKEQYSLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPVYLEKLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGIPHGSEVVNGGD
                     LAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK"
     gene            complement(2358..3731)
                     /gene="dbpA"
                     /locus_tag="JQ356_002514"
     CDS             complement(2358..3731)
                     /gene="dbpA"
                     /locus_tag="JQ356_002514"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HAY4622569.1"
                     /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR
                     VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
                     ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
                     MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAVISGRVQRDPLAIEIDSTDALPPIEQ
                     QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE
                     QRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR
                     AGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVPLEAEMATLCIDGGKK
                     AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT
                     CRVRLLK"
     gene            complement(4177..5160)
                     /gene="zntB"
                     /locus_tag="JQ356_002515"
     CDS             complement(4177..5160)
                     /gene="zntB"
                     /locus_tag="JQ356_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HAY4622570.1"
                     /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
                     LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD
                     QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
                     FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
                     FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
     gene            5415..6647
                     /gene="dgcM"
                     /locus_tag="JQ356_002516"
     CDS             5415..6647
                     /gene="dgcM"
                     /locus_tag="JQ356_002516"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcM"
                     /protein_id="HAY4622571.1"
                     /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQ
                     LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVI
                     IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA
                     LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ
                     TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM
                     QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE
                     EFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRV
                     DDALYRAKNDGRNRVLAA"
     gene            complement(6668..7231)
                     /gene="smrA"
                     /locus_tag="JQ356_002517"
     CDS             complement(6668..7231)
                     /gene="smrA"
                     /locus_tag="JQ356_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HAY4622572.1"
                     /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL
                     DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMV
                     FSFIHQALADGLRNVLIIHGKGREDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG
                     SGACYVALRKTAQAKQENWERHAKRSR"
     gene            complement(7561..8469)
                     /locus_tag="JQ356_002518"
     CDS             complement(7561..8469)
                     /locus_tag="JQ356_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4622573.1"
                     /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE
                     EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG
                     ASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE
                     FTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT
                     PQVGVVCETFSACISLVAKSDFLSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ
                     RRDSRQTPLTPSLITQFRRECGYLQS"
     gene            8645..9945
                     /locus_tag="JQ356_002519"
                     /pseudo
     CDS             8645..9945
                     /locus_tag="JQ356_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415854.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
     gene            9945..11390
                     /locus_tag="JQ356_002520"
     CDS             9945..11390
                     /locus_tag="JQ356_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HAY4622574.1"
                     /translation="MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLA
                     SALESAGFTVTRNVGYIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTP
                     GENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGV
                     FDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANFPHLGRSALDAVTLMT
                     TGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAK
                     IAEGAALMTETTVECRFDKACSSYLPNRTLENAMYHALSHFGTPEWNSEELAFTKQIQ
                     ATLPPNDRQNSLNNIAATGGENGKAFALRHRETVLANEVAPYAATDNVLAASTDVGDV
                     SWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTLNLFIDSGL
                     LQECQQEHQQVTDTQPYHCPIPKNVTLSSLK"
     gene            11427..12953
                     /gene="abgT"
                     /locus_tag="JQ356_002521"
                     /pseudo
     CDS             11427..12953
                     /gene="abgT"
                     /locus_tag="JQ356_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
     gene            12964..13479
                     /gene="ogt"
                     /locus_tag="JQ356_002522"
     CDS             12964..13479
                     /gene="ogt"
                     /locus_tag="JQ356_002522"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HAY4622575.1"
                     /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
                     HYRKEGYERISATNPGGLSDKLSDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
                     GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            13674..14426
                     /locus_tag="JQ356_002523"
     CDS             13674..14426
                     /locus_tag="JQ356_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HAY4622576.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
     gene            14578..15528
                     /gene="uspE"
                     /locus_tag="JQ356_002524"
     CDS             14578..15528
                     /gene="uspE"
                     /locus_tag="JQ356_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HAY4622577.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ
                     EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFEPSVYN
                     DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
                     SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD"
     gene            complement(15578..15836)
                     /locus_tag="JQ356_002525"
                     /pseudo
     CDS             complement(15578..15836)
                     /locus_tag="JQ356_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309940.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
BASE COUNT         4135 a         3951 c         3913 g         3961 t
ORIGIN      
        1 catgatatgt ctaaattacc aacaggtgtc gagattcgag gtaaatacat tcgcatctgg
       61 ttcatgtttc gaggaaaacg atgtcgggaa acattgaaag gctgggagat tactaacagt
      121 aacattaaaa aggccgggaa tttaagagcg ttgatagttc atgaaatcag ttccggtgaa
      181 tttgagtatt taagacgttt tccccagtcc agcactgggg caaaaatggt gacaacgagg
      241 gtcataaaaa cattcgggga gctttgtgat atctggacaa aaattaaaga gacagagtta
      301 acaacaaaca caatgaagaa aacgaaatca caattaaaaa cactcaggat aataatttgt
      361 gagagtaccc cgatatcgca tattcgttat agcgatatct taaactaccg gaatgaactg
      421 ctgcatggag aaacgcttta cctagataat ccaagatcca acaaaaaagg aagaaccgtg
      481 cgcacagttg atagctatat cgccctgctc tgttcgttgt tacgttttgc gtatcagtcg
      541 ggatttatat caaccaaacc atttgaagga gtaaaaaaat tacagcgaaa cagaataaaa
      601 cctgacccgt tatctaaaac agaattcaat gcattaatgg aaagtgaaaa aggacagagc
      661 caaaacttgt ggaaatttgc cgtttactcc gggcttcgtc acggggaact ggcagctctg
      721 gcgtgggagg atgtggattt cgagaaggga attgtgaatg tcagaagaaa cctgacgata
      781 cttgatatgt tcggtccccc aaaaacaaat gccgggatcc ggacggtaac attactgcag
      841 ccggctcttg aagcactgaa ggagcaatac aaactgaccg ggcatcatcg caaaagcgaa
      901 atcacttttt atcatcggga gtacggcaga actgaaaagc aaaaactgca ttttgttttc
      961 atgcccaggg tgtgtaacga aaaacagaaa ccttattact cggtaagcag tttgggtgca
     1021 agatggaatg cagcagtaaa acgtgctggt attcgccgcc gtaatccgta ccatacgcga
     1081 catacttttg cctgctggct gttgacggca ggagcgaacc cggcatttat agccagccag
     1141 atggggcatg aaactgcgca aatggtgtat gaaatttacg gtatgtggat tgatgacatg
     1201 aacgacgaac agatagccat gttgaatgcg cggttatcgt agttgcaaag tttgccccca
     1261 atttgcccca tttagtacca gagaactgaa ataatgcaag aaaatcaaca aattacaaag
     1321 aaagaacaat acagcctgaa caaattacaa aaacgtctac gtcgtaacgt gggcgaagcc
     1381 attgctgact tcaatatgat tgaagaaggc gatcgcatca tggtttgcct ctcagggggt
     1441 aaagacagct ataccatgct ggagattctg cgcaatttgc agcaaagcgc gccaatcaat
     1501 ttttcgctgg tggctgttaa cctcgatcaa aagcaaccgg gcttcccaga acacgttctg
     1561 cccgtgtatc ttgaaaagct gggcgttgag tacaagattg tcgaagagaa cacttacggt
     1621 atcgtgaaag agaagattcc agagggcaaa accacttgct cactgtgttc tcgccttcgt
     1681 cgcggtatcc tttatcgtac cgcaacggaa ctgggggcga cgaagatcgc gctgggtcac
     1741 catcgtgacg atatcctgca gacgttgttc ttaaatatgt tctacggcgg caagatgaaa
     1801 ggtatgcctc cgaaactgat gagcgatgat ggcaaacata tcgttattcg tccgctggcc
     1861 tactgccgcg agaaagatat tcagcgattt gccgatgcaa aagcgttccc gattattccg
     1921 tgcaacctgt gcggttcaca gcctaacctg caacgtcagg tgattgctga catgttgcgt
     1981 gactgggata aacgttatcc agggcgtatc gagacgatgt tcagcgcgat gcagaatgtg
     2041 gtgccgtcgc atctgtgcga taccaacctg ttcgatttca aaggcatccc ccacggttct
     2101 gaagtggtta acgggggtga tctggcgttt gatcgcgaag agatcccact acaaccggcg
     2161 ggctggcagc cagaagaaga tgaaaatcag ttggatgagt tacggctgaa tgtggttgaa
     2221 gtgaaataac caggatagcg cccgatgcgc aagcgtatcg ggctactctt atggaggccg
     2281 gataagacgc ggccaacgtc gcatccggca atgccgaaga agatgtttac tcttgcaccc
     2341 ggcaattcaa catttcatta ttttaataac cgcacccggc acgtttttcc tttaatcttc
     2401 ccgccctgta actgtttcca tgctttatga gcaacagcct gacggaccgc gacatagaca
     2461 tgcgccggat gcacggcgat tttgccaata tctgcgccat caagcccgat atctcctgtc
     2521 agtgcaccta atacatcacc cgggcgcatt ttggcttttt tcccgccatc gatacacaac
     2581 gttgccattt ctgcttccag cggcacaatg gaactattag ctggcggcgt ttgccagtta
     2641 agttttatct gcaacatgtc agaaatgata ttggcccgct gtgcttcttc cggagcacag
     2701 aaactgatcg ccagaccgct atttcctgca cgagctgtac ggccgatgcg atgtacatga
     2761 acttcagggt cccacgccag ctcaaagttc accaccagct caagcgattt aatatccaga
     2821 ccacgcgcag caacatcagt cgcaaccagt acacgggcgc taccgttagc aaaacgtacc
     2881 agggtctgat cgcgatcgcg ttgctccaaa tcgccgtgta atgacaatgc actttgccct
     2941 acttcattca gcgcgtcgca gacagcctgg caatcttttt tggtattgca aaacaccacg
     3001 caagaggatg gctgatgcaa gcttaataac cgttgcaaca gaggaatttt gcctttgctg
     3061 gatgtctcat aaaattgttg ttcaatgggt ggcaaagcat ctgttgagtc aatttcaatc
     3121 gccaaaggat cgcgttgcac tcgtccgctg attacggcga tggcttccgg ccaggttgcc
     3181 gaaaacagaa gcgtctgtcg agatgcaggc gcaaaacgga tgacatcatc aatggcatcg
     3241 ctaaatccca tatccagcat gcggtcggcc tcatccatca ccaaagtatt cagcgcatcc
     3301 agtgataccg tgcctttttg caagtgatcc agcaaacgac ccggcgttgc cacgataata
     3361 tgcggcgcat gttgcaacga atcacgctgc ataccgaacg gttgaccacc gcacaacgtc
     3421 aaaattttgg tatttggcag aaaacgcgcc agccgacgca attcacctgc cacctgatcc
     3481 gccagttcac gcgtaggaca cagcactaaa gcctgggttt gaaatagcga cgcatcaatt
     3541 tgctgtaaca agccgaggcc aaaagccgcc gttttgccgc tgccggtttt cgcctgcacg
     3601 cgaacatctt ttccggcaag gatcgccgga agcgcggcgg cctgcaccgg cgtcatagtt
     3661 aaataaccca actcattaag gttcgtgagt tgggcgggag gcaaaacatt cagggtagaa
     3721 aaagcggtca caatctattc tcgtggtcat cgacgcaaag ttagcaggcg cgtatcctcg
     3781 cagatctacg cgggtggtgg gtcaggcatg ggttgcgggc gagggatcgg atcgggcact
     3841 ggaacaggat cgccaggaat cggttcaggg acaggaattt gcaaataaat aagtgtcgtc
     3901 atatttccct ccggtcattg ggtggactct taaagggtag acgctgataa ataacaggca
     3961 aaaaaaagcc gactcatcaa agtcggcgtc gtacgaatca attgtgctat gcagtaattc
     4021 aaaaaaggaa gtaagacaat atggagcgca acgcccatcg cttgacgttg cattcacctg
     4081 caagggagat attgccctga atgggtagag agtttattga cttcgctcaa actttgcggc
     4141 gtttttgtat acagacagcc ggaaaaattg cttttgttac aaccatttac tacgatgcaa
     4201 ccataaagca acaccaccaa taagaacaac taacagaata caaaaaattg aaaatccgaa
     4261 ttgccacccg ccgccaggga tcccaccaag gttgacgcca aataaccctg tcagaaaggt
     4321 actgggtaaa aagaccattg ccatcaatga cattgtatag gtacgacgag ctaaattttc
     4381 ctgcatcacc tgagcgattt catccgccat cacgccagtc cgtgctatac aggcgtcgat
     4441 ttcgtcaaga ccgcgcccaa ggcgatcggc aatatcctgc atccgacggc gttggtcatc
     4501 gctcatccac ggcaaacgtt cactggcaag acgagcataa acatcacgtt gcggtgccat
     4561 atagcgacgc atcacgatta attgtttgcg cagcagagcc aggaatccac gcggtggaat
     4621 ttgctgatca aggagattat cttcaaggtc gataatttta tcgtgcagct gctcgataaa
     4681 ttcgctggaa tgatcggtca acgcatcgca cacatccacc agccaccctc cgcaatcggt
     4741 cggacccgtg ccctcttcca gatcgctcac cacatcgtcc agcgccagca ctttgcgttg
     4801 tcgggtcgaa acaattaacc gcccgtccat atatacacgc atggcgacca gttgatcggg
     4861 gcgttcatcg gtgctgccgt ttatacagcg caatgtaatc agcgtgcctt caccgagacg
     4921 gctgactcgg ggccgtgtgc tctcgcctgc cagcgcatca cgtacgttat tgggaagcag
     4981 cggtgttgtc gccagccatt gggcgctatc atggtgtaca taattaaggt ggagccagca
     5041 gggatgcgct tcatcaatca catctgtatt ttccagcggt ttaacgccgc ctctaccatc
     5101 cagcatccag gcaaatactg catccgggac attaacgtcc gatcccttaa tcgcttccac
     5161 agtgcctcca tcatcaacgc attattttgt agtctagcct tctggccctg ttacgcaaca
     5221 tctcatcacc ccattaccct gaaatgatta ataaaattct gtctaaattg aatacaaaaa
     5281 gcaaaatgct tttccgtata caaaccgtgt gaagtgttaa atagcgtcta tcattatcag
     5341 aattatctga tcatatgacg tggctttttt gcgatcggat agcaacaaaa attgataaaa
     5401 ataacgggat ctcaatgatt acgcacaact tcaataccct ggacttactc accagtcctg
     5461 tctggattgt ttcgcccttt gaggaacagt taatttatgc caatagcgcg gcgcgactgt
     5521 tgatgcaaga cctcacgttt agtcagctac gaaccggacc ctattccgtc tcctcacaaa
     5581 aagaactgcc gaaatacctc tccgatctgc aaaaccaaca cgatattatc gaaatcctca
     5641 ctgttcagcg taaagaagag gaaacagcat taagctgtcg gcttgttttg cgagagctga
     5701 cagaaacaga accggtgatt attttcgaag gtatcgaagc gccggcaacg ctgggtttaa
     5761 aagccagtcg ctcggcaaat tatcagcgca aaaaacaagg tttttatgcg cgcttttttc
     5821 tgactaactc tgcaccaatg ttgttgattg acccctcacg agatggccaa atcgtcgatg
     5881 ctaacctcgc cgcgctcaat ttctacggtt ataaccatga aacgatgtgc cagaaacata
     5941 cctgggaaat taatatgctc gggcgtcgcg tcatgcctat catgcatgaa atttcgcatt
     6001 tacccggcgg tcataaacct ttgaattttg ttcataaact ggcggatgga tctactcgtc
     6061 atgtgcagac ctatgccggg ccgattgaaa tttatggcga caagctcatg ttatgtattg
     6121 tgcatgatat tactgagcaa aaacggctgg aggagcagct ggaacatgct gctcaccatg
     6181 acgcgatgac cggattactg aatcggcgac agttttatca cattacggaa ccaggccaaa
     6241 tgcagcacct cgccatcgcc caggattaca gcttgttgct catcgacacc gatcgtttta
     6301 aacacattaa cgatctctat gggcattcta aaggtgatga ggtgttatgc gccctcgccc
     6361 gcaccctcga aagttgcgct cgcaaaggcg atttggtgtt tcgttgggga ggcgaagagt
     6421 ttgtcttatt gctaccaaga accccactgg ataccgcgct ttcgctggct gaaactatcc
     6481 gtgtaagcgt ggccaaagtg agtatttcgg gcttaccacg ttttaccgtc agcattggtg
     6541 tggcgcatca cgaaggaaat gaaagcatcg atgaactgtt taaacgcgtt gatgatgctt
     6601 tgtatcgggc gaaaaatgat ggacgcaacc gcgtgctggc ggcataagcc gcggatgcgt
     6661 ctcgagatca acggctgcgc ttagcgtggc gctcccagtt ttcttgcttc gcctgcgccg
     6721 ttttacgtag tgcgacgtaa cacgccccgc tgccgccatg atgcggtagc gcggtgcaat
     6781 atgcctgaac atcatcaaat tcggtcagcc agcgcgccac atagctgcgg acaatattgg
     6841 catgcgattt atcttcccgc cctttaccat gaataatcag cacattacgc aaaccatccg
     6901 ccagggcttg gtgaatgaaa ctgaacacca ttttgcggca ctcttccacc ggctggcgca
     6961 aaagattcag gctcgcctgt tgcggatatt taccactgcg cagcttatcc agcaccccat
     7021 gttgcaaccc ttcccgccga aactccagcg gctgacttag cgggatgatg tcgagaaatc
     7081 cggtggtgag gaaattatca agctgcagcg tgtcgatacg ctgcggcgca cgttggttac
     7141 gcgttggatg ccagtggaca tctgtagcac gtttcagcgg ctggacatct tccatggcgt
     7201 caagaaacag cgatttgtcg tcaaggttca tgttacatcc tcccgcaatt aagagcgcga
     7261 tatgataacc agaccgggtc ggtccaacaa cgtattacca aaaattccag taataagttc
     7321 caaatattgc cgatatttta agcaaaatgc ttatgcatga ttattcattc acgatattaa
     7381 taatgtaact tatattttcg tgaaatctgt cactgaagaa aattggcaac taaaggttaa
     7441 aaccgttata acacagtcac cggcgcagag gagacaatgc cggacttaag acgcggatgc
     7501 actgctgtgt gtactgtaga gtctggcgga tgtcgacaga ctctattttt ttatgcagtt
     7561 ttaactttgc agatagccgc attctcgccg gaattgcgtg attaatgacg gggtcagtgg
     7621 tgtctggcga ctatcacgcc gctgaatcaa ataataggcc gctttcggta aaatttcgct
     7681 aaccggcaac atcaccagcc cctgtccgtg caagggatcg cagcccattt cttcaggcag
     7741 tatgctgaga aaatcgcttt ttgccaccag actgatacag gctgagaacg tctcgcagac
     7801 tacaccgacc tgtggcgttt gcgcctgatc gtcaagcaat tcactcaact gtttgtagta
     7861 actgccgtgt ggcgtcggca ttgtccagct gtaatccagt aactgtttga tcgaacgggc
     7921 accaatggcg gggtgtcccg ggcggcaaaa gatcgcgaat tgcttttcca gtaatttctc
     7981 aaaagtaaat tcgtggtcgt acggtccctg ataataggta ttgatggtga aatccaattc
     8041 tccctgacgc aattcattaa tcatcgacac cagttgccct tccataatgc gtacttttac
     8101 ctgcggatgc tgctgatgaa aacgagatat gacagctggc atcagactgc gggaaatact
     8161 ggcccccatg ccgatattaa tctgccctgc cagttgccct tgtcgttggc gaatatcctc
     8221 ttgggctgcg cgcagctctt caagaataag actggcgtgc tgataaaaac tttcaccggc
     8281 atcagttaac gtcacgcctt tactacggcg aaaaaagagt tgcgccgcta atccttcttc
     8341 caactcctga atagatttac tcagtgccgg ttgcgacata ttcaacattc ggctcgctcc
     8401 gcgaatgctg ccctgacgag ccacttcaac aaaagcacga atttgatgaa tttttacctg
     8461 aaaagccatg acgccaccga taaccgttat ttatcagacc aaagaaactg gcatctactt
     8521 taatgcagat gattgtgtca gggtaattta tgaacggtta aaactgtgaa aaatcagtta
     8581 gtgataagta aaaactatcg ctacgtgaac cgggtcacac tttttactga tgacgggaaa
     8641 ggttatggag tctttgaatc aatttgttaa ttcgcttgcc ccaaaattat cgcactggcg
     8701 acgtgatttt catcactatg cagagtctgg ctgggtggaa ttccgcactg ccacccttgt
     8761 tgcggaagaa ttgcagcagc tcggctattc actggcgctg ggccgcgaag tagttaatga
     8821 aagtagccgg atgggactac ctgatgaact cactctacaa cgcgaattcg agcgcgctcg
     8881 tcaacagggt gcgctagcac aatggattgc ggtttttgaa ggtggtttca ctggtatcgt
     8941 cgccaccctg gataccggtc gccccggtcc ggtgatggct ttccgtgtcg atatggacgc
     9001 gctggatctc agtgaagagc aggatgtcag ccatcgcccc taccgcgacg gttttgcgtc
     9061 atgtaacgcc ggaatgatgc atgcctgtgg tcatgatgga cataccgcca ttgggcttgg
     9121 gctagcgcat acccttaaac aattcgagtc cggactacat ggcgtcatca aactgatttt
     9181 tcagcctgca gaggaaggta cgcgtggcgc gcgggcgatg gtcgatgcag gtgtcgtaga
     9241 tgatgttgat tattttactg ccgtgcacat tggcactggc gtacctgcgg gcaccgtggt
     9301 gtgcggcagt gataatttta tggcaaccac caaatttgac gcgcacttca ccggtaccgc
     9361 cgctcacgca ggcgcaaaac cagaagacgg tcacaatgcc ttgttggcgg cagcacaagc
     9421 cactcttgca ctgcatgcaa tcgccccgga gcttccagag taaacgtggg cgttatgcag
     9481 gcaggaagcg gtcgtaacgt tgttcctgcc tcggcgttgc tgaaagtgga aacacgcggg
     9541 gccagcgacg tcattaatca atatgttttt gaccgtgcac aacaagcgat tcagggcgca
     9601 gcaaccatgt atggtgtcgg cgttgaaact cgtctgatgg gtgcagctac cgccagttct
     9661 ccttcgccgc aatgggtcgc atggttgcaa agtcaggcgg ctcaggtcgc ggggggcaat
     9721 caggccattg aacgtgttga agcgcctgcg ggttccgaag atgccacatt aatgatggcc
     9781 cgcgtgcagc aacatcaagg gcaagcctcc tacgtggtgt ttggcacaca gctggcggca
     9841 ggtcatcaca acgaaaaatt cgattttgac gagcaggttc tcgctattgc cgtcgaaacg
     9901 ctggcgcgca ccgcgctcaa ttttccctgg acgcgaggta tctgatgcag gaaatctatc
     9961 gttttatcga cgatgcgatt gaagccgatc gccaacgtta taccgatatt gccgatcaaa
    10021 tctgggatca tccagaaaca cgttttgaag agttctggtc agcggagcat ctggcttcgg
    10081 cgctggaatc tgcaggcttc accgttaccc gcaacgtagg ctatatccca aatgccttta
    10141 ttgcttcgtt tggtcaaggc aaaccggtta tcgccctgct gggagaatat gacgccctgg
    10201 caggtttaag tcagcaagca ggttgcgcgc aacctacatc cgtgacgccc ggtgaaaatg
    10261 gtcacggttg cggacacaat ttgctgggaa ccgccgcctt tgccgctgca atagccgtca
    10321 agaaatggct ggaacaatat gggcaaggcg gcacggtgcg cttttatggt tgtcctggcg
    10381 aagaaggcgg ctcgggtaaa acgttcatgg ttcgcgaggg ggtatttgat gatgtggatg
    10441 cggcactcac ttggcacccg gaagcctttg ccggtatgtt caatacccgc acgctggcaa
    10501 acattcaggc atcatggcgc tttaaaggga tcgcagcaca tgccgcgaat ttccctcatt
    10561 tgggacgcag cgcccttgat gccgtaacgt tgatgaccac tggcaccaac ttcctcaacg
    10621 aacatattat tgaaaaagcg cgcgtacact atgccatcac aaatagcggc gggatctcgc
    10681 ccaacgtggt ccaggcgcag gcagaagtgc tttatcttat ccgcgccccc gaaatgaccg
    10741 acgtgcagca tatttatgat cgggtcgcca aaatcgccga aggtgcggca ttgatgaccg
    10801 aaaccacggt tgaatgccgc ttcgacaaag cctgttccag ttatctcccg aatcgcacct
    10861 tagaaaatgc catgtaccat gccctatccc attttggtac cccggaatgg aactccgaag
    10921 aactggcttt tacgaaacaa attcaggcta cgctcccccc caacgatcgg caaaacagtc
    10981 tgaataatat cgccgcaacc ggtggcgaaa acggcaaggc ttttgcacta cgtcatcgtg
    11041 aaacggtact ggcgaatgag gtcgctccat atgccgccac cgataacgtg cttgcggcat
    11101 cgactgatgt cggcgacgtc agttggaaac tgcctgttgc ccagtgtttc agcccctgtt
    11161 ttgccgtcgg tacaccgcta catacgtggc aactggttag ccaggggcga acatctattg
    11221 ctcataaagg aatgctgctg gcggcgaaaa ctatggcagc aaccacactc aatctcttca
    11281 ttgattcagg gctattgcaa gaatgccaac aagagcatca gcaagttacg gacacgcaac
    11341 cgtatcactg ccctatccca aaaaacgtga cactgtcatc tttaaaataa caacaacaac
    11401 gcaaacacaa caaccgagga atgcccatga gtatgtcatc cataccgtcg tcctcctaat
    11461 ccgggaagct ctatggctgg gtcgaaagaa ttggtaacaa ggttccccat ccttttttgc
    11521 tctttatcta tttgattatc gtactcatgg tgacgacggc aattttgtcg gcctttggcg
    11581 tcagtgcgaa aaacccgacc gatggaacgc cggtggtggt gaaaaacctg ctcagtgtgg
    11641 aaggattaca ctggttttta cccaatgtta ttaaaaactt tagcggtttt gctccacttg
    11701 gtgcgatcct ggcgctggtt ttaggtgccg gtctggcgga gcgcgtcggc ttactgccag
    11761 cgctaatggt taaaatggca tcgcatgtta atgtccgcta cgccagttat atggtgctgt
    11821 ttattgcttt tttcagccac atttcttccg atgcggcgtt agtgatcatg ccaccgatgg
    11881 gtgcgctgat ttttctggcg gtgggcaggc atccagttgc aggtttactg gctgccattg
    11941 caggcgtagg ttacggcttt acggctaatt tactgattgt cacaaccgac gtgttgctgt
    12001 cggggatccg cacggaagcg gcggctgcgt tcaatccgca aatgcacgtc agtgtaattg
    12061 ataactggta ttttatggcc agctccgtag tcgtactgac gattgttggc ggcctgataa
    12121 ccgacaaaat catcgagcca cggttaggtc aatggcaggg aaacagcgat gagaaactgc
    12181 agacattgac cgaaagtcag cgttttggtt tacgcatagc aggtgtcgta tcgctacttt
    12241 ttattgctgc gatcgcgctg atggtgatcc cggaaaacgg gatattgcgc gatccgatta
    12301 atcacaccgt gatgccatca ccctttatta aaggtatcgt gccactaatc attctttttt
    12361 tctttgtggt ttcgctggct tatggcatcg ctacccgcac aattcgacat caggcggatt
    12421 taccgcattt aatgattgaa ccgatgaaag agatggcggg atttatcgtg atggtttttc
    12481 ccctcgccca gtttgtcgcc atgtttaact ggagcaacat ggggaaattc atcgccgtgg
    12541 ggctgaccga tatactggaa agttcagggc ttagcggcat cccggcgttt gtcggtctgg
    12601 cgttgctttc ctctttctta tgcatgttta ttgccagtgg ttccgcaatc tggtcgattc
    12661 tggcccccat tttcgtacca atgtttatgc tacttggctt tcacccggca tttgcgcaaa
    12721 tcctctttcg tattgccgac tcatccgtat tgcctttagc gccggtatct ccttttgttc
    12781 cactgtttct tggattcctg caacgctaca aaccagacgc gaaactgggt acttactatt
    12841 cgttagtctt gccctatccg cttatctttt tggtggtatg gctgctgatg ttgctggcgt
    12901 ggtatcttgt tggtctgccg ataggtccgg ggatttaccc acgtttgtct taagagagaa
    12961 cggatgctga gattacttga agaaaaaatt gccacgccac tgggtccact gtgggtgatt
    13021 tgcgatgagc aatttcgcct gcgggcggtt gaatgggaag agtacagcga acgcatggtg
    13081 cagctgctgg acatccatta tcgcaaagaa ggctatgagc gcatttctgc caccaaccca
    13141 ggcggtttaa gcgacaagct tagtgattat tttgccggta atcttagcat tattgatacg
    13201 cttcccactg ccacaggggg gacgccattt cagcgcgaag tctggaaaac tctacgcact
    13261 atcccctgcg ggcaggtaat gcattacggc caactggctg aacaattggg ccgccctggc
    13321 gcggcgcgtg ccgttggtgc ggcaaacgga tcgaatccca tcagcatcgt cgtaccttgc
    13381 catcgggtta ttggccgaaa cggcaccatg accggatatg caggcggagt tcagcgaaaa
    13441 gagtggttat tgcgccacga aggttatctt ttgctgtaaa cattaaacaa tttgtgccaa
    13501 cttgttcaca cttttatgta aagttaccct taacaactta atggttttca aatagataga
    13561 catatattta catctaatat cggaattctc tgctgttaag gtttgcttag acttacttgc
    13621 tccctaaaaa gatgttaaaa ttgacaaata tcaattacgg cttgagcaga cctatgatcc
    13681 cggaaaagcg aattatacgg cgcattcagt ctggcggttg tgctatccat tgccaggatt
    13741 gcagcatcag ccagctttgc atcccgttca cactcaacga acatgagctt gatcagcttg
    13801 ataatatcat tgagcggaag aagcctattc agaaaggcca gacgctgttt aaggctggtg
    13861 atgaacttaa atcgctttat gccatccgct ccggtacgat taaaagttat accatcactg
    13921 agcaaggcga cgagcaaatc actggtttcc atttagctgg cgacctggtg ggatttgacg
    13981 ccatcggcag cggccatcac ccgagcttcg ctcaggcgct ggaaacctcg atggtatgtg
    14041 aaatcccgtt cgaaacgctg gacgatttgt ccggtaaaat gccgaatctg cgtcagcaga
    14101 tgatgcgtct gatgagcggt gaaatcaaag gcgatcagga catgatcctg ctgttgtcga
    14161 agaaaaatgc cgaggaacgt ctggctgcat tcatctacaa cctgtcccgt cgttttgccc
    14221 aacgcggctt ctcccctcgt gaattccgcc tgacgatgac tcgtggcgat atcggtaact
    14281 atctgggcct gacggtagaa accatcagcc gtctgctagg tcgcttccag aaaagcggta
    14341 tgctggcagt caaaggtaaa tacatcacca tcgaaaataa cgatgcgctg gcccagcttg
    14401 ctggtcatac gcgtaatgtt gcctgatttt tccgcataac tcactatcct tctgtcatat
    14461 cattaaattt ttctgattta ttgatctggc agaaggttca tcactgtttc attcaccaga
    14521 tatgggttaa tcttttaatt acaaactgcg ttgacagttg ttgtaaggag accctgtatg
    14581 gctatgtatc agaacatgct cgttgttatc gatcctaacc aggacgacca accagcattg
    14641 cggcgagctg tttatttaca tcaacggatt ggtggcaaaa ttaaagcctt tttgccgatc
    14701 tatgacttct catacgaaat gaccaccctg ctctccccgg acgaacgtac cgctatgcgt
    14761 cagggcgtca tcagccagcg tacagcctgg atccacgagc aggcaaaata ttatctcaat
    14821 gctggcgttc ccattgaaat taaagtggtc tggcataacc gtcctttcga agccatcatt
    14881 caggaagtga tcagcggcgg gcacgatttg gtgctaaaaa tggcgcacca acatgaccgt
    14941 ctggaagcgg tgatttttac gccaacggac tggcatctgt tacgcaaatg cccaagcccg
    15001 gtgtggatgg tgaaagacca gccgtggccg gaaggaggta aggcgctggt ggcggtgaat
    15061 ctcgccagtg aagagccgta tcataatgcg ctcaatgaaa aactggtcaa agagacgatc
    15121 gaactggcag aacaagtcaa ccataccgaa gttcatctgg ttggcgctta cccagtaacg
    15181 ccaattaata tcgcgattga actgccggaa tttgagccga gcgtttataa cgatgccatt
    15241 cgtgggcaac atttgctggc aatgaaagcc ctgcggcaga aattcggcat taatgaaaac
    15301 atgacgcacg tagaaaaagg tctgcccgaa gaggttattc ctgatttggc ggagcactta
    15361 caggcgggga ttgtggttct gggcacggta ggacgcaccg gtatttcagc agcattcctc
    15421 ggcaacacgg cggaacaggt gattgatcat cttcgctgcg atctgttggt cattaaacct
    15481 gaccagtatc agacacccgt tgaactggat gacgaagaag acgattaacg actcttcaat
    15541 aactgacaag gcccgagtta tcgggcctat tttttactta ctgctcttcg ccgccaagga
    15601 aataaattcc caacgggatt gccagcaaca cagtaaagac caggctataa acaaaaatca
    15661 tcgatgactg aatcacatac attgatgtcg tccactcaga cagcggaata ttgtactgtt
    15721 ctataacgcc gccgatagtc gcgcgagtca caaccgacgc cgcaataatg acaaaccgcc
    15781 aacaaaccaa agagaaattt cttccctttc gctgacttca gtttcgccat aatcatgatg
    15841 taatccttgt gcagacaaat ttcttgttac ctaaacgtaa caataccatg acatttcacc
    15901 gttgtctgct ctgaaaacct cacctcttag ctggatttac aatcaacgca ttgattagtt
//
LOCUS       DADKRT010000096        15913 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.097, whole genome shotgun sequence.
ACCESSION   DADKRT010000096 DADKRT010000000
VERSION     DADKRT010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15913
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.097"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..744
                     /locus_tag="JQ356_002526"
     CDS             <1..744
                     /locus_tag="JQ356_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY4622578.1"
                     /translation="SSTDKPAKLKFHQYARATLLSNRGRDHNCDGRRTVEIHKLDLSD
                     WQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLL
                     QDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYI
                     DQLHTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRD
                     IRSDRMHLTPANHPDLWTQENGEWIYLRN"
     gene            complement(815..1264)
                     /gene="rplI"
                     /locus_tag="JQ356_002527"
     CDS             complement(815..1264)
                     /gene="rplI"
                     /locus_tag="JQ356_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HAY4622579.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNI
                     EFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE"
     gene            complement(1306..1533)
                     /gene="rpsR"
                     /locus_tag="JQ356_002528"
     CDS             complement(1306..1533)
                     /gene="rpsR"
                     /locus_tag="JQ356_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HAY4622580.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            complement(1538..1852)
                     /gene="priB"
                     /locus_tag="JQ356_002529"
     CDS             complement(1538..1852)
                     /gene="priB"
                     /locus_tag="JQ356_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HAY4622581.1"
                     /translation="MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            complement(1859..2254)
                     /gene="rpsF"
                     /locus_tag="JQ356_002530"
     CDS             complement(1859..2254)
                     /gene="rpsF"
                     /locus_tag="JQ356_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HAY4622582.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            2581..2856
                     /locus_tag="JQ356_002531"
     CDS             2581..2856
                     /locus_tag="JQ356_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY4622583.1"
                     /translation="MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYIN
                     HNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR"
     gene            complement(2931..3482)
                     /locus_tag="JQ356_002532"
     CDS             complement(2931..3482)
                     /locus_tag="JQ356_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HAY4622584.1"
                     /translation="MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPP
                     RTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCIV
                     AEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWI
                     IEIMRRDLRNRITHEPDPEVAIR"
     gene            complement(3579..4265)
                     /locus_tag="JQ356_002533"
     CDS             complement(3579..4265)
                     /locus_tag="JQ356_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HAY4622585.1"
                     /translation="MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKADDMVVVDMSGKVVEGKYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAW
                     AQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRK
                     HGPNAYYGQK"
     gene            complement(4265..5119)
                     /locus_tag="JQ356_002534"
     CDS             complement(4265..5119)
                     /locus_tag="JQ356_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase UlaE"
                     /protein_id="HAY4622586.1"
                     /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
                     ERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
                     IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
                     LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPG
                     VFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVVKARDWVKARMA
                     KAGMVEAA"
     gene            complement(5129..5779)
                     /gene="ulaD"
                     /locus_tag="JQ356_002535"
     CDS             complement(5129..5779)
                     /gene="ulaD"
                     /locus_tag="JQ356_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HAY4622587.1"
                     /translation="MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGV
                     RAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVA
                     KEFNGDVQIELTGYWTWEQAQQWRDAGIQQVVYHRSRDAQAAGVAWGEADITAIKRLS
                     DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG"
     gene            complement(5793..6257)
                     /gene="ulaC"
                     /locus_tag="JQ356_002536"
     CDS             complement(5793..6257)
                     /gene="ulaC"
                     /locus_tag="JQ356_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HAY4622588.1"
                     /translation="MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYY
                     QAILDAVEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA"
     gene            complement(6267..6572)
                     /gene="ulaB"
                     /locus_tag="JQ356_002537"
     CDS             complement(6267..6572)
                     /gene="ulaB"
                     /locus_tag="JQ356_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
                     /protein_id="HAY4622589.1"
                     /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
                     KSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK"
     gene            complement(6588..8036)
                     /gene="ulaA"
                     /locus_tag="JQ356_002538"
     CDS             complement(6588..8036)
                     /gene="ulaA"
                     /locus_tag="JQ356_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HAY4622590.1"
                     /translation="MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVT
                     CLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISD
                     TYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL
                     IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASW
                     IAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAM
                     AGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAA
                     IYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFG
                     GWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMA
                     VIIVIALAYMFFAGRALRAEEDAEKQLAEQSA"
     gene            8340..9404
                     /gene="ulaG"
                     /locus_tag="JQ356_002539"
     CDS             8340..9404
                     /gene="ulaG"
                     /locus_tag="JQ356_002539"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HAY4622591.1"
                     /translation="MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG
                     GSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKV
                     VIPFHHDIWSNFQAAPQEIRVQWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            9512..10267
                     /gene="ulaR"
                     /locus_tag="JQ356_002540"
     CDS             9512..10267
                     /gene="ulaR"
                     /locus_tag="JQ356_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HAY4622592.1"
                     /translation="MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLF
                     SRADQIDMLITGKNANPEILQQLEAQGVSILRV"
     gene            complement(10264..11013)
                     /gene="yjfP"
                     /locus_tag="JQ356_002541"
     CDS             complement(10264..11013)
                     /gene="yjfP"
                     /locus_tag="JQ356_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY4622593.1"
                     /translation="MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYS
                     YFAVALAQAGLRVIMPDAPDHGSRFSSDEARRLNQFWQILLQSMQEFTTLRAAIAEEN
                     WLLDDRLAVGGASMGAMTALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAA
                     QQNEFNNIIAPLAEWEATNHLEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETGRD
                     KLLTCSWQPGVRHRITPEALDAAVTFFRQHL"
     gene            11195..11524
                     /gene="bsmA"
                     /locus_tag="JQ356_002542"
     CDS             11195..11524
                     /gene="bsmA"
                     /locus_tag="JQ356_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313192.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HAY4622594.1"
                     /translation="MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTNHPQE
                     IRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYS
                     QAILYRK"
     gene            11673..11948
                     /gene="yjfN"
                     /locus_tag="JQ356_002543"
     CDS             11673..11948
                     /gene="yjfN"
                     /locus_tag="JQ356_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease activator YjfN"
                     /protein_id="HAY4622595.1"
                     /translation="MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVS
                     NISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA"
     gene            complement(12065..13690)
                     /locus_tag="JQ356_002544"
     CDS             complement(12065..13690)
                     /locus_tag="JQ356_002544"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418608.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HAY4622596.1"
                     /translation="MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLA
                     SIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHN
                     LAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPL
                     LSDRYDSLLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS
                     VPQSDAHLVLAQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDA
                     IGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQ
                     PLMCHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPF
                     VAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLS
                     EAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQ
                     AWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCV"
     gene            complement(13774..14832)
                     /locus_tag="JQ356_002545"
     CDS             complement(13774..14832)
                     /locus_tag="JQ356_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY4622597.1"
                     /translation="MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRM
                     DFAWCGNAPVKLLEYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQ
                     QAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQW
                     VEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKPQIAAGESYVRKPIYSREGGN
                     VTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIRED
                     NTLITKDTSRFVPHYIAG"
     gene            complement(14835..15473)
                     /locus_tag="JQ356_002546"
     CDS             complement(14835..15473)
                     /locus_tag="JQ356_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HAY4622598.1"
                     /translation="MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLAL
                     MGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADV
                     PKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
                     PVWLNTSGDYSWRSGSGKKESYSSGGFTTKKASTISRGGYGRSSSARGHWGG"
     gene            complement(15483..15881)
                     /locus_tag="JQ356_002547"
     CDS             complement(15483..15881)
                     /locus_tag="JQ356_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HAY4622599.1"
                     /translation="MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNN
                     TAVSLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSE
                     KIINHNTAAGMFMGTAALAGGIFNAACMTW"
BASE COUNT         4086 a         4257 c         3844 g         3726 t
ORIGIN      
        1 tcgtccaccg acaaaccagc aaaattaaaa tttcatcaat acgcacgcgc tacattactg
       61 tcaaatcgtg gaagagatca taattgcgat ggcagacgta ctgttgagat ccacaaacta
      121 gatctctctg actggcaagc attcaataag ttagcaacga agtgtaatgc ttacgatgga
      181 gtaacaatga atggtgataa ttcttttgga tggaaccatg aagctacatt agataatatt
      241 cacgcccaga aatacaataa agcttacgcg ggtgcgaggt taaccgcaga actgaaatat
      301 ttattgcaag atgtcgaatc cttcgaaccc aacagtaaat acacaataca cgaagtggtt
      361 ttgggacctg gttatggtac tccagactat accggccaaa cgataggata cgttgtaacc
      421 cttcctgccc aaatgcctaa ttgctggtca tctgaactac caacaatcga tctttatatc
      481 gaccaacttc acactgttac aggcgtttct aatgccctcg gattcatcat tgctgcattg
      541 ctaaacgcgt attctgattt accccatgat ttgaaaattg gtctgcgttc cttatcaaat
      601 tcagcagcaa tctactcggg tttaggtttc gagcgagtgc cgcaggaccg agacataagg
      661 agtgatcgta tgcatctaac gccagcaaac catcctgact tatggacaca agagaatggt
      721 gaatggatct acttgcgaaa ctaatacctg acgaaaaata gaaagcaaaa cgccgaccaa
      781 tggtcggcgt ttttacgtct cgttgaataa cgaattattc agctactacg tttacgatca
      841 ctttcgcgaa tacttcgctg tgaacctgga agctcacttc gtgttcgcca gtggtacgca
      901 gaacgccgtt cggcagacga acttcgctct tagccacttc aacgccagct gcagttacag
      961 cgtcagcgat gtcgcgagta ccgatggaac cgaacagttt accttcgtcg ccagctttag
     1021 acgcgatggt aacagtttcc agtgcattga ttttctcagc gcgagcatta gcagctgcca
     1081 gaacttcagc cagtttagct tccagttcag cgcgacgtgc ttcgaagaat tcaatgtttt
     1141 tcttggtagc tggaacagct ttaccctgcg gtaccaggaa gttacgagca tagcccgctt
     1201 taacgtttac ctgatcacct aggctaccca ggtttgctac tttatcaagc agaataactt
     1261 gcattacctt atcctctcaa agtcgtatta atggaccgtg accgattact gatggcgatc
     1321 agtgtacggc agcagggaca ggtagcgagc gcgtttgata gcgcgagcca gctgacgctg
     1381 gtattttgca cgggtaccgg tgatacggct tgggacaatc ttaccgcttt cggtgatgta
     1441 gtttttcagc gtagcgatat ctttatagtc gatctcttga acgccttccg cggtgaaacg
     1501 gcagaacttg cgacgacgga aataacgtgc catatggcta gtctccagaa tctatcaatt
     1561 caatctgctc ggcatgcaaa accattttgc tcagtccgtt ctttgccttg tggcatgaaa
     1621 tgaacccctg aacggttatg cgactgccga ccgttatact gtgagtaatg gcctggtttt
     1681 cgtgtccgct aacaataacg ggcatttggc accacgcctg ccggtgaaaa ccggcttcct
     1741 cctgcacaga acgatgctca agcacgaact ggcagtgagg aattcctgat ggactgacct
     1801 ttcgaagggg agtcctgcac acggtgccgg acaacaccag acggttggtc atcagaaatt
     1861 actcttcaga atccccagct tcagcatcat cagcggtttc gtttgcgaaa tcatcgcgac
     1921 gctcacggcg ctcgtctttc gctttaacca tcggagatgc ttcggtaaca gcgtgcttgg
     1981 tacgcataac catgctgcgg ataacggcat cgttgaagcg gaaggtagtt tccagctcat
     2041 cgatcacttc ctgcggagct tcaacgttca tcagaacgta gtgtgctttg tgcagtttgt
     2101 tgatcgggta agccagctga cggcggcccc agtcttccag acggtggatc ttgccttctg
     2161 caccagtgat ggcagcagtg tagcgctcga tcatgcccgg aacctgttcg ctctggtcag
     2221 gatggaccat aaaaacgatt tcgtaatgac gcatcgaatt gctccttacg gattattcag
     2281 cctcctgtct gggtcagccg aatcccgggg aggcaaggaa cgtgttaaag gtcggctgaa
     2341 aaatgacgcg ttatagtact tgtatgcccc actaaactca aggccagccg acaaataaat
     2401 ctcatctttc gctcaaaaga actaactcgc tgatttgaag ttcatcacat tccgtcacag
     2461 tgttttttcg aacaactgca tcagaaatgg tcaccatcaa cttctttatc attgattaaa
     2521 attaaatcag aagatcatca cagaggagag cacacaaagt cagccgtcga ggaggtatct
     2581 atgttcagtc gtgttttagc ccttctggct gtgcttttgc taagtgcaaa tacatgggca
     2641 gccattgaaa ttaataacca ccaggccaga aatatggacg acgtacagag cttaggcgtg
     2701 atttatatca atcataattt cgccactgaa agcgaagcac gtcaggcatt aaatgaagag
     2761 acagatgcgc agggcgcaac gtactaccac gtaattctga tgcgggaacc ggggagtaac
     2821 ggcaatatgc acgccagcgc ggatatttat cgctagcacc aggtataacc aacgaaacat
     2881 tgccatagtt tgctttgccc ccttcgcagg gggctttttt atacggttat tcaccggatt
     2941 gcgacttccg gatctggctc atgagtaatg cgattacgta agtcgcggcg cataatttct
     3001 attatccaga accagaaaat atgccccagg atttcagagg catattcgtc aaaaggcaat
     3061 tgagtgagcg gcggcgttaa attcagcgcc gggcaaaata taccgtggac tgccactgtc
     3121 acaataagcc ctgctaatat cccctgccat aatttcactt tcgggaaaat ttccgcgaca
     3181 atacaatacc ctatcgcaaa aaccagtgag aagatgatat gcgtcaccat caccgggttg
     3241 ataatatgtt ccgagaatgt atacacagtt tgggttgggt cgatacctaa ataatcccgt
     3301 agaaagatat acggcgggtt aaattcatcg cgaccaccgg aaaatgtgcg cggtggcaag
     3361 gggacttccg ctccccattt aacaaatgct gaaataattc ctgaaagtac acccacaagt
     3421 aacgcaacgc catagcggcg acgttgcgga tccgttctga caaacaatcc attgatagcc
     3481 ataaaaacac ctgttgttta tacgattttt taactgaagc ggccccggaa tcagaccaat
     3541 tacatcccgc aggaggtaat aattccgggg cgcactgctt acttctgccc gtaataggcg
     3601 ttaggaccgt gcttacgcat gaagtgttta ttcatgagga agctgtcgat gtgattcagt
     3661 tgtgggttaa tactgcgcgc aatccacgcc attttcgcca cttcttccat caccaccgcg
     3721 ttatgcaccg cgtcgtgggc atctttcccc caggcgaacg gcccgtgctg atacaccaca
     3781 attcccggcg tatgcagcgg ctcggcgtca cccagcgttt cgataatcac tttgccggtg
     3841 ttcagttcat actcgccctg cacctcttct tcgcttaatc cacgcgtaca cgggatgtcg
     3901 ccaaagaagt agtcggcgtg cgtggtgcct aacgccggga tcgccagccc cgcctgcgcc
     3961 catgcggtgg catgagtgga atgggtatgg acaatgccgc cgagcgacgg gtaacgacgg
     4021 tagagttcaa gatgcgtcgc ggtgtcagaa gacgggcgat acttcccttc taccaccttg
     4081 ccgctcatat cgaccaccac catatcgtct gctttcatgg tttcgtaggc aacgccgctg
     4141 ggcttgatca ccaccagccc gcgttcgcgg tcgatagcgc tgacgttgcc ccaggtaaag
     4201 gtcaccagcc catagcgcgg cagatccatg ttggcttcaa acacctgctg ttttagcttt
     4261 tgcattatgc cgcctccacc atgcctgctt tggccatgcg cgctttcacc caatcacgcg
     4321 ctttcaccac ttctgccgcc gggtcttccg ccgtttcgct ccacatctca atcaggtacg
     4381 gcccgcaata gccactctgt ttgagcgttt cgaagcaacg ttcgaaatcc accacacctt
     4441 cgccaaatgg cacgtttttg aagacgcccg gtttggtgtc tttcacatgc accgcgacga
     4501 tatgcccgat tccggcctgc aactccatct gcacatcgtt gtcccacgcc gacaggttgc
     4561 cgatatctgg gtagagctgg aaccacgggt tgttgagata gtgcgcgtaa cccagcgcct
     4621 tgctgatgga gttcatcaac ggataatcca tgatctccat cgccagcgtc acctgcgcgc
     4681 ggctcgccat ctcaacgctc tctttcaggc cgtcacggaa acgacgacgc gtttcgttat
     4741 tggcttcctg atagtaaacg tcatagcccg ccagctggat cacgcgaatg ccaacgtcct
     4801 gggcgaactg gatggcttta cgcataatct ccagcccctg cgcccgcacc gcgtcatctt
     4861 cgctgcccaa cgggaaacga cgatgggcag aaaggcacat ggacggcaca cgcacgccgg
     4921 tttcaacaat cgcattcacc agcgccagac gctgctcgcg gctccagtcg aggcgcgaca
     4981 ggcgctcgtc agtttcatct accgacatct cgacaaaatc gaagcccaac gtttttgcca
     5041 gtcgcaggcg ttccagccag cactccccgg cggggagcgc tttttcatag atgccaagcg
     5101 ggatttgttt ggacaacata tccgctcctt agccccacag ttcggcgatg gaacgtttga
     5161 actgacgcgc ggcttcaacc ggagaagcgg catcacggat gctgcgaccg gcgataaaca
     5221 catgaattgg aatgcctttg aacagcggca gatcttccag cgccaggcca ccggtgacgg
     5281 tgactttgaa gcccatatcg gaaagacgtt tgatcgcagt gatatcggct tcaccccacg
     5341 ccacgccagc ggcctgcgcg tcacggctgc ggtgataaac cacctgctga atacctgcgt
     5401 cgcgccactg ttgcgcctgt tcccaggtcc agtaaccggt cagttcgatc tgcacgtcgc
     5461 cgttaaactc ttttgctacg tccagcgcac ctttggcggt gttgatatcc gcacaacaaa
     5521 tcacggtcac ccagtcagcg ttggcttcga agcacatacg agaaagaatt ttgcccgcat
     5581 cggcaatttt ggcgtctgcc agcacgattt tgtgcgggta gagcgctttc agatcgcgaa
     5641 ccgcacgcac gccttcgccc acgcacagaa tggtacccac ttcgataatg tcgacttctt
     5701 cggcaatcag gcgagtggtt tcgtaggcgc tatccatagt ctggttgtcc agcgcgactt
     5761 gcaacatcgg taatgacatc ttcaattcct tcttaagctg ccgcgttggt gcggtcaatg
     5821 agatccagta cttcctgctc ggtacggcag gcacgtaaac ggtcgaaatt ttcttcatct
     5881 tcaaacaggt tgacgatctg catgatgccc acttcctggt gcgtgttggc atcgaccgcc
     5941 gccatggtga tgaggatatc caccgggtcg ttatcttcgt ggttgaactc cagcggcttt
     6001 ttcagcgtca ccagcgcaaa accggttttc ttaacgccct cttccgggcg accgtgcggc
     6061 attgccaggc ctggtgcgag cacaaagtac ggaccgtgct gttcaaccgc atccagaatc
     6121 gcctggtagt aacgcggctc gacaacatcc gccgccacca gcaggtcaac gccgattttt
     6181 actgcgtcct gccatgtctc agcttcagcc tgcaggcgga tggatttatt ctccgccagc
     6241 gaatcacgta atttcatggc gcgtccttac ttcacatcct gcgggaaatg cgctttgatc
     6301 acttccagca gtttcgggcc aaagtcggca ggagagagca tgttgcgcac gccaaccacg
     6361 tatttgttgc cggtcacggt gatttcgccc gcaatgtgcg tagaagcgat gatgatatcc
     6421 gcgccgctca actcgctttt gtattcgcca accgcgcagc tatttaccgt gtggtcaatg
     6481 tttgattggg ttaaaaactg gtccactttc atcttcatga tcatggaact gccttgtccg
     6541 ttgccacaca cagccagaat acgtacggtc ataatcaaaa ctccttatta agcagactgt
     6601 tctgccagtt gtttttctgc atcttcttct gcgcgcagtg cgcggccagc gaagaacata
     6661 taagccagtg caattacaat gatgacggcc ataaaggcga taccgatgga gaagaagccc
     6721 tgcatcatcg gcggtgccag aatcgaccag tccgccatgc ccatccaggc gctcataccg
     6781 gtgagtttca ccgcccagac gcagccaaag atttcaatca tccccatcac cagacatatc
     6841 ttcagcgccg cacgccagcc gccgaagtgg ttagcgaaca cgccgatggt ggcgttggag
     6901 aagaacatcg ggataaagcc gggaataatc aggatcgagg aaccgcaggc gaccaggatg
     6961 ccaaccgcaa tcagctgacc gatggtgccc cacataaagc cccaaaccac ggcgttcggc
     7021 gcgaagctat agatagccgc acagtcaatc gccagaaccg caccagggat caggcgctgg
     7081 gagataccgt taaatgcttc agagagttcc gccacaaaca tgcgcacgcc ctgagtgatg
     7141 atgaagatcg ccaccgcgaa ggagaaacca gtttgcagga tgtacaccgt ccagttcact
     7201 ttgcctgcca tcgcctgcac ggtgtcgata ccgaaggaga gtagaatggc accaaagaag
     7261 atggtcatca caatcgccgt ggagacgatg ttgtcgtgga aaatattcag ccagcctggc
     7321 agtttgaggt cttcaacgct ttcctctttt ttgccgagga acggcgcaac tttataggca
     7381 atccatgatg caaactgttg ctggtgaccg atggagaaac cgcagccgtc cgtcacttcc
     7441 tgagtcggct tgtacatcat attggaggta atgccccagt agagcgaaac cagaatcgcc
     7501 gtgcagataa tggttgtcca catggagtag ccgaaaataa acaacgtaac ggcaatcagc
     7561 cccgcctgct ggaacatgat atgaccagtc agcatgatgg tacgaatacc ggtaatgcga
     7621 cgcagcagca cgtaacagat gttcagcgcc agcgctaaca acaccgcgta acctacccag
     7681 ctataggcat cgcccatgcg gtcgatggtt gccatcatcg acgcgtaagt atcggaaatt
     7741 gcgccgttaa tgccgtagac ttcggacatt ttcgccacca ccggtttgaa ggtgctggtg
     7801 aggatgccgg accctgcctg caacaacatg aaaccaatta tggttttaat cgtgccttta
     7861 ataataacgc tgacactttt gcgcagtagg atgtagccca gacaggtcac aatacccagc
     7921 aacaacgggg cattggtcat gacctggtta aaaaacacgg taaagatgtt gtagagacga
     7981 tctcctgaag aagaggtaac cgggtattcc gcacacccgg aatgttgtgc actcactcta
     8041 attttcaaaa gcaatcacaa caagattatt tatgattaaa tgtgacgcga cccgcaaata
     8101 attccatacg gatagagtgg gatccacaca acgaaacaat tatttattta aatttagtta
     8161 aattcattta gttaatttaa ctatacattc cattaaatct ttccacactc aaaatcaaca
     8221 acaacttccc tggcaaaaag tcaaaaaatg gtcattgcct tcctgaaaaa atagtgtcag
     8281 gattaatcaa aaccaatcac atattgattc gaattgaact atcatgaagg taaatggcga
     8341 tgagtaaagt gaaaagtatc acccgagaat cctggatcct gagcactttc ccggagtggg
     8401 gtagctggct gaatgaagaa attgaacaag agcaggtcgc ccctggcaca tttgcgatgt
     8461 ggtggctagg ctgcaccggg atctggttga aatcagaagg tggcaccaac gtttgcgttg
     8521 atttctggtg cggcactggc aaacaaagtc acggtaaccc gttaatgaaa cagggtcacc
     8581 agatgcagcg catggctggc gtgaaaaaac tgcagccaaa cctacgcacc accccgtttg
     8641 ttcttgatcc gtttgcgatt cgccagatcg acgcggtact ggcgactcac gatcacaacg
     8701 atcatatcga cgttaacgtc gctgctgccg tgatgcagaa ctgtgctgat gacgtaccat
     8761 tcattggacc gaaaacctgc gttgatttgt ggattggctg gggcgtaccg aaagagcgtt
     8821 gcatcgtggt caaaccgggc gatgtggtga aagtgaaaga cattgaaatt catgcgcttg
     8881 atgctttcga ccgtactgca ctgatcaccc tgcctgccga tcaaaaagcg gctggcgtac
     8941 tgccggacgg catggacgat cgcgcggtga actatctgtt caaaacgcct ggcggctccc
     9001 tgtatcacag cggcgactcc cactactcta actattatgc gaagcacggt aacgaacatc
     9061 agatcgacgt ggctttaggt tcatacggcg aaaacccgcg cggtatcacc gacaaaatga
     9121 ccagcgccga tatgctgcgt atgggtgaag ccctgaatgc gaaagtggtt atcccgttcc
     9181 accacgatat ctggtcaaac ttccaggccg ctccgcaaga gatccgcgtg cagtgggaga
     9241 tgaaaaaaga tcgtctgaag tatggcttca agccgtttat ctggcaggtt ggcggcaaat
     9301 ttacctggcc actggataaa gacaacttcg agtaccacta tccgcgcggt ttcgatgatt
     9361 gcttcactat tgaaccggat ctgccgttca aatcattcct gtaatctgtc gtttataccg
     9421 gatagcgtgg agaagttcgc gctatccggc gtagtatttc ctggctattt caaatatcat
     9481 ctaaaaaaat caaattttat cggaatagct catgactgaa gcacaaagac atcaaatcct
     9541 cctggaaatg ctcgcacaat tgggctttgt gaccgttgag aaagtcgttg agcgtctggg
     9601 aatttcgcct gccactgcgc gacgcgatat caataaactt gacgaaagcg gcaaactcaa
     9661 aaaggtgcgc aatggcgcag aagctattac ccaacagcgc ccgcgctgga cgccgatgaa
     9721 tctgcatcag gcgcagaatc acgatgaaaa agtacgtatt gctaaagcgg cctcgcagct
     9781 ggttaatccg ggcgaaagcg tagtcatcaa ctgcggctcc accgcgtttc tgcttgggcg
     9841 ggaaatgtgt ggcaagccag tgcaaatcat cactaattat ctaccgctgg caaattacct
     9901 gatcgatcaa gaacatgaca gcgtgatcat tatgggtgga cagtacaaca aaagtcagtc
     9961 catcacttta agcccgcagg gcagcgaaaa cagtctctat gccgggcact ggatgtttac
    10021 cagcggaaaa gggctgaccg cagaagggtt gtataaaacc gatatgctga cagcaatggc
    10081 agagcagaag atgctgagcg tggtagggaa actggtggta ctggttgata gcagtaagat
    10141 tggcgaacgc gcgggaatgc tttttagccg tgccgatcaa atcgatatgc ttatcaccgg
    10201 caaaaatgct aacccggaaa tcctgcaaca actggaagcg caaggggtca gcattctgcg
    10261 tgtttaaaga tgctggcgga aaaatgtcac ggcagcatct aacgcctcag gcgtaatgcg
    10321 gtgacgcacg cctggctgcc atgaacaggt tagcagttta tcccgtcccg tctcgcttaa
    10381 ggcctgctgc aaacgtagtg attcgtcggc aggcacaacg tcatcgtcga ggccatgcca
    10441 cagcagtaga ggtctgtccc caagttgttc caggtggttt gtcgcttccc actctgccag
    10501 cggcgcgata atgttattga attcattctg ctgtgctgcc gtttcaggta tcagcggtgg
    10561 aaacagtgaa cgggcgagcg atgtaaaata gcccgatccc atcatgctgg cggtacattt
    10621 caccgtgggg tggcgagcgg taattcccag tgccgtcatc gcgcccatcg acgcgccacc
    10681 gactgccaga cggtcatcaa gcagccagtt ttcttcggct attgccgcac gtaaagtagt
    10741 gaattcctgc atactttgta gcaagatttg ccagaattga tttaaccgcc gcgcttcgtc
    10801 gctactaaaa cggctaccgt gatcgggcgc atccggcatg atcacccgca aaccagcctg
    10861 cgccagcgca acggcaaaat agctatacac caggctggat gaagtaaagc cgtgataaaa
    10921 aattacgcac ggtaacgggg tatctttttg cccgacagga taagcatgaa gaacgggaat
    10981 atctgccagc tcgcgtgatt ctatttcaat catctgtctc tcctttttgt ctggtatgac
    11041 atgaagaaat ccttagcaca agtttctgct ggcggtatta gttcataatg ttgagatgtg
    11101 ggttacgctt tcgtcacgtt ttcattcgaa aatcgcgtac caggtaacaa ttcgggaaca
    11161 ttcccccaaa gttaaattaa taaggcacta cactatggtt agcaggaaac gtaatagcgt
    11221 tatttaccgg tttgccagtt tattattggt gttgatgtta agtgcctgta gcgcactgca
    11281 aggtacgcca cagccagcac cgccagtaac gaaccatccg caagagattc gccgcgacca
    11341 gacgcaaggg ttacagcgaa taggtagcgt aagcacgatg gttcggggtt ctccggatga
    11401 cgcattagca gaaatcagag caaaagctgt cgctgcaaaa gctgattatt acgttgtcgt
    11461 catggtggac gaaaccatcg tgacaggaca gtggtattca caagccattt tgtaccgtaa
    11521 ataaatcaga caacttacat agtcagcttt acattgcttt gcgtccctat gcgtttacct
    11581 gtgcacaata aattaccggc tggaagcctg ggcgtttatt accgcgatgg aatgccctgc
    11641 aacatgtggg gaaacgaaaa atggagctga cgatgaaaca attacttgct tcaccctcgc
    11701 tgcaattagt gacttatcct gcgagcgcca cggcacagtc tgcagaattc gccagtgctg
    11761 actgcgtgac gggcctgaat gaaataggtc agatctcagt tagcaatatt tcaggggatc
    11821 cgcaggacgt ggaacgtatc gtggcgttaa aggccgatga acaaggtgcg tcatggtacc
    11881 gcattattac catgtacgaa gaccagcagc ctgataactg gcgcgtacag gcgatactgt
    11941 atgcatgagt gtcatctaca gcaaatgaac aatgccggat tcggcgcgag cgccttgtcc
    12001 ggcctacaat tttcacatat ttcattgagt taatcgaaac cagcgtcgca tcagtcgtat
    12061 acgcttacac acacactccc cccgtcgccc gcagcaataa atcattctgg atctgctctg
    12121 acaaccgtac gccgccgcgc gtatctaaca tcacctgaca ccacgcctgc gccattggcg
    12181 gagaagcata tttcaacatt tgcgcaccgc agcccagcag gaatagctga tgagtaatct
    12241 ctcgccccag ttcttcagct ggcttacgca gctgctgctg taaacgacga accgcgcgat
    12301 caaaatagcg atcctgccct ttcacttcca caaatgcttc cgacaataag tcgtatacgc
    12361 ccgcttgctt attgagaacg cgcaacacat ccaggcacat aatattgccg gaaccttccc
    12421 aaatactgtt taccggcatc tcccggtaaa gccgcggcag ctcgctctcc tcgcaataac
    12481 caatgccgcc cagcacctcc atcgcttcgg ccacaaacgg catacctctt ttgcagatca
    12541 caaattttgc cgcaggcgta aataaacgcg cccacagggc ttctttggca tcggcacgcc
    12601 ggtcccacgc tcgcgcaaga cgaaacagca acgccgtttg cccttcaagc tgaagtgcca
    12661 tgcgacttaa gacatgacac ataaggggct gttggatcaa tggattacca aaaacatggc
    12721 gttgatgtgc atgataaatc gccagcgaaa atgcacggcg catcatggca tggctaccca
    12781 gggcgcaatc aaaacgcgtc atcccaccca ttttcaggat cagacgaatt ccttcccctt
    12841 cctgccccaa caaccagcca atggcatcct gaaactccac ttcgcaactg gcgttagagc
    12901 gattacccag cttatctttc agccgctcga ggcgaatcgc gttgcgttgc ccatcaggca
    12961 aaaagcgcgg cacaaaaaag caggacaaac cgcccgtagt ctgcgccagc accagatgcg
    13021 catcgctttg cggcaccgag aaaaaccatt tatgccccac cagccgataa gagccatctt
    13081 ccagacgctc tgcacgggtg gtgttgctca tgacatcgga accgccctgc ttttccgtca
    13141 ttcccatgcc aatcaacaaa ccgcgttttt gcccacctgg caataagaga gaatcgtagc
    13201 gatcgctcag cagcggcgtg gtccagtcct gaaacggcgt gggtaacatc tgtaacaaca
    13261 atggcgtggc ggcaaaggtc atcgttattg gacataacga cccagcctca acctgcgcat
    13321 gtaacataaa acgcgccgcg cgcgccacaa atgcgccgga gcgagcgtct tcttcccagg
    13381 caagattgtg cacccgattg gtacataacg cctgcatcag caggtgccag gcggggtgaa
    13441 aacgcacatc gtccagacgg cgtccttgcg catcgtagcg caataattca ggcggattca
    13501 cattcgccag ccgccccagt tcaagagatt cagccgttcc taactgctga ccaatactgg
    13561 ctagaaaatc gctatcccag ccagcacctt cacgcgttac cgcttcacag agcgcgccat
    13621 cagacaggta taagttgctg ttatttaatg gtataggttg attaaaaacg gtgtgagttt
    13681 gccagtgcac tgtgtctccc tccatcaatg gcagtcaccc ttagtatggt cactgccatg
    13741 gattcctgac agaaagagat tgctaaaaca ttcttatcca gcaatgtaat gcggaacgaa
    13801 acgtgaggtg tctttggtga tcagcgtgtt atcttcacgg atccccattc cgcacgcttc
    13861 atcatcgaca atccagctac cgatgagtgt gtagctatcg ccaaatcgcg gcagaggttg
    13921 aaacgcctgg tagatcatcg gttcatcggc gtaatcacca tcagcgtggt caacgacgtt
    13981 attctgaccg tcgaaaatgg tgacgtttcc gccttcgcgt gagtagatcg gtttacgcac
    14041 atagctttcg ccagcggcaa tctgcggttt ttcgccctca aaccaggatg caagaaggtt
    14101 aggatgacca ggaaagaagc gccaaagcag cggcattagc cctttattac tcaagatact
    14161 tttccataac ggctccaccc attgctcgcg acgcttgcgc agcagcggac cgttatcgtc
    14221 acgcatcatc cactccagcg gatacagctt aaatgcacgc tggatgacat tatcatcaag
    14281 atcggtcagt acgccgccga cgcccaaacc gagatcttca atgtagataa accgcgactc
    14341 ctgccctgcc tgctgggcgc agtcctgcaa gtacagcacg gtactcctgt cttcatcggt
    14401 gtcctgacag cagcaaaaat aaaacggttc ccgactgtaa agctcactaa agcgcgaaat
    14461 caggcgttcc tgaatggcgt tgtactccag cagcttcacc ggcgcattgc cacaccaggc
    14521 aaaatccatc cggccataca gcgaaggatc gcgtgcgcgc cagctttcgg cgatcacatc
    14581 ccagtacaac ggcgggatcg ccagttgcgt caggatctct tcgtctttaa ccgcgcgatc
    14641 caccacctca aggcacatct gatgcagttc cgcagtcggt ttttcgatct gctcttcaat
    14701 ctggcgcaga gtaaaacggt aagcccgact ctcgtcccaa tagatttcat tgtcgatgat
    14761 atgaaagtcg aaaccgttgt tagcggcgat ctggtccaga tcccgtcgca caggaacgtt
    14821 gtgtctcagc atgattagcc tccccaatgc ccacgggcgc tggaagaacg accatagccg
    14881 ccgcgcgaaa tggttgacgc ttttttggtg gtaaagccgc ctgaagagta agactctttt
    14941 ttgccagaac cggagcgcca ggagtaatca ccggaagtgt tgagccagac ggggcgggaa
    15001 gcaaatgagg atccgccgct gttatagacg aacggctcat cgcgatcttt acgaataacc
    15061 cggcttaaca aaaatccaga aacgaccggg atccaactct gttcaacatt gtcgtagtag
    15121 caattttcgt acttagactg acaattctgc tgagtcatat tcttcggaac atcggcataa
    15181 aatgccgctt tggcgttgtt ccagccacgc gcgcaaatgt cggcattatt accgtcatca
    15241 atacaatcct gcactgtcga ataaaacgtt ccgtcgccgt cgttatcgac atcgccacta
    15301 tcgccacaac ctttcaatac aaaaaaagcg gcaccgccca ttagcgccaa cgttaagtat
    15361 ttttgtgcgt agcgattgcg acgcggttca aaaggattat tcggtctacc aatgcgactg
    15421 atcgctccgt gaccaatttt actgttattt cttgatttgc gttttctggc catgatcgtc
    15481 cattaccatg tcatacaagc tgcgttaaaa ataccgccag ccagcgcggc ggttcccata
    15541 aacattcctg ctgcggtatt gtgattaata attttttcgc ttaatgcggg catataaagt
    15601 ctgacaccag caaaaacgag taactgaatc accagtgcaa tcccgcccca ggcgaaatag
    15661 tctggaatac tcaccgcatt gattgccgca ctggataagg ggatcacgta acccaacaat
    15721 gtaccgctga atgccagtga caccgcggta ttattgtttt tgattaattg ccattcgttg
    15781 tgcggtgtaa ttttggagta gataaacaga aaaataatca ccatagccac gccaataaaa
    15841 aaataggcac taaaggcaag aagtgaatcc agtatatgca ttgtaaacgt ccttgtaatt
    15901 aaccaataat atg
//
LOCUS       DADKRT010000097        15658 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.098, whole genome shotgun sequence.
ACCESSION   DADKRT010000097 DADKRT010000000
VERSION     DADKRT010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15658
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.098"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            337..429
                     /locus_tag="JQ356_002548"
                     /pseudo
     CDS             337..429
                     /locus_tag="JQ356_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004120448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            433..612
                     /locus_tag="JQ356_002549"
                     /pseudo
     CDS             433..612
                     /locus_tag="JQ356_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310134.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimH domain protein"
     gene            946..3225
                     /gene="ydeP"
                     /locus_tag="JQ356_002550"
     CDS             946..3225
                     /gene="ydeP"
                     /locus_tag="JQ356_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance putative oxidoreductase YdeP"
                     /protein_id="HAY4622600.1"
                     /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP
                     EGFDCPGCAWPDPKHTASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE
                     LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
                     FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN
                     PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
                     NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
                     KDIEHISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
                     GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQA
                     ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
                     VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS
                     VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
                     ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
                     ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
                     PLSGIPGYKSIPVELEPSN"
     gene            3473..3670
                     /gene="safA"
                     /locus_tag="JQ356_002551"
     CDS             3473..3670
                     /gene="safA"
                     /locus_tag="JQ356_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system connector SafA"
                     /protein_id="HAY4622601.1"
                     /translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLG
                     ISEMGRIARDLTHFIINSLQD"
     gene            3745..4506
                     /gene="ydeO"
                     /locus_tag="JQ356_002552"
     CDS             3745..4506
                     /gene="ydeO"
                     /locus_tag="JQ356_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response transcriptional regulator
                     YdeO"
                     /protein_id="HAY4622602.1"
                     /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
                     ERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN
                     HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
                     YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
                     FRKHFGNSPKRVSKEYRCQSHTGMNTGNTMSALAI"
     gene            4908..6590
                     /locus_tag="JQ356_002553"
     CDS             4908..6590
                     /locus_tag="JQ356_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HAY4622603.1"
                     /translation="MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAF
                     SDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAI
                     EAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGI
                     PLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQ
                     NRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPF
                     MLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQ
                     YDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKL
                     ISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEE
                     NIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYNLTD
                     LQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK"
     gene            6642..7799
                     /locus_tag="JQ356_002554"
     CDS             6642..7799
                     /locus_tag="JQ356_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HAY4622604.1"
                     /translation="MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIK
                     QYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEW
                     CSFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVI
                     NNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAY
                     GKFMSTIFMQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIY
                     ECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRISAKCQQCAYKPICNGGCPKHRIT
                     KVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN"
     gene            complement(7765..7887)
                     /locus_tag="JQ356_002555"
     CDS             complement(7765..7887)
                     /locus_tag="JQ356_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622605.1"
                     /translation="MTKHPTGIYVGCLVKVIRRRLRMELKESVINYSPFVLQHP"
     gene            8120..9805
                     /locus_tag="JQ356_002556"
     CDS             8120..9805
                     /locus_tag="JQ356_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HAY4622606.1"
                     /translation="MITIPITFCMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILG
                     VVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIR
                     WREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
                     SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRP
                     LNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELRDNFHTIKENWHRLMNRQR
                     WLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDE
                     LAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVANASIRTPDNKIILENLNFHVSP
                     GKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDIFSPADSWYVSQTPLIKTGLLKEIICK
                     ALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWI
                     FLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISAVL"
     gene            9843..12215
                     /locus_tag="JQ356_002557"
     CDS             9843..12215
                     /locus_tag="JQ356_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY4622607.1"
                     /translation="MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVN
                     GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY
                     QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG
                     RFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYFSPD
                     FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVVGRAQYKNVIDTALS
                     KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR
                     TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ
                     KFAVGDVSHQPYSGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGSLGIDN
                     YTLYMADHISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFADQTSMITAGYNRY
                     YGGNILDMGLRDIRNSWTESVSGNKTLTRYQNLKTPYNDELAMGLQQKIGKNVIARAN
                     YVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFNLSFELAEPLHIRQVDINPQ
                     IVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFT
                     HQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSW
                     TPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF"
     gene            12260..15055
                     /locus_tag="JQ356_002558"
     CDS             12260..15055
                     /locus_tag="JQ356_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY4622608.1"
                     /translation="MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGL
                     RYMIYPHAQPKDQVNLWLQIHTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETF
                     ESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAE
                     RGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQR
                     WYQPNNMTFIVVGDIDSKKALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDK
                     ENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTA
                     RSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWL
                     KNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQL
                     RKNQDAFWEQMVNNELAAKKALSPAAILALEKEYANKKLAAYIFPGRNLSLTVDADPQ
                     AEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQITAVSNKGDLSFPAQQKSLIA
                     LANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLIN
                     QRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIV
                     QFTAADALAADRQLFSSPADITFVIVGNVSEDKLVALITRYLGSIKHSDSPLAAGKPL
                     TRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLATRMALDAFNVALAKDLRVNIRE
                     QASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQEL
                     NEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVK
                     QYLSHPVNTYTGVLLPK"
     gene            15417..>15658
                     /locus_tag="JQ356_002559"
     CDS             15417..>15658
                     /locus_tag="JQ356_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY4622609.1"
                     /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT         4563 a         3406 c         3427 g         4262 t
ORIGIN      
        1 tggtgacggc agttgaaacc aatgtgttga ggttgcatgg acggttaagc cgagaatacg
       61 gtagtaagtg agatatgggg tttggtcgtt gttaatgagc aaccatgacc atgaccgcca
      121 acgactggat tctcccttgg tttatgttgg tgcgcataat gtatattatg ttaaatcata
      181 tctgagtgat gcgaagtgct tttctggtag tcgttattcg ttcagggttc cagaacttaa
      241 gcctctcctc tttcataatt ggcctgtgca tgacggatat aggctggctg gtatgcagat
      301 ttgccgtttg ccgcatcttc ccagcgttga agactcaagc tggcaaaccg cgtgcaaatg
      361 agcacgccct ctttccatca acacttcagg cagcttgcgg gaatgagtcc actacggtat
      421 cagaaatggg aagtgggtgt ctctctgatg cgtaatggaa aaatactggc tacgggagaa
      481 aatgtctccc tggggacagt aaataaaagc aaagtatctc tgggtttaag cgcaacctat
      541 ggacaaacag gaaacaaggt tgcagccgga accgtccagt cagtcattgg tgtcactttt
      601 atctatgaat aattgtgatt ttgatcttag tctatgcgct ccattcacga aaattgcgcg
      661 gataattatt ttgtgaaggc tattatccta cacctgtaag aaaatccgcg cacaattgaa
      721 gccagagtct tattttttat attgaaaaat atgttaattt aaacactatg agagatgatg
      781 cttaacttat cgtatttaat ctattgttta acgataatag attaaaaata gaaagagagt
      841 agtcccctac tcttatatat ccatgttggc gataatccct ttgtatgtac tgtgcatcat
      901 cgctattaca aatcctaata attcatttcc acacaggata agtagatgaa gaaaaaaatt
      961 gaatcctacc agggtgctgc aggtggttgg ggtgctgtta aatccgtagc gaatgcagta
     1021 cgtaagcaga tggatatacg ccaggatgtt attgccatgt ttgacatgaa taagccagag
     1081 ggctttgact gtccgggttg tgcatggcca gatcctaagc acactgcgtc attcgacatt
     1141 tgtgaaaacg gcgcaaaagc aatcgcctgg gaagtcacgg ataagcaggt aaatgcctct
     1201 ttctttgctg agaatacggt tcaatcatta cttacctggg gagatcacga gcttgaggct
     1261 gcgggacgtc tcactcagcc tttgaaatat gatgccgtca gcgactgtta caagccatta
     1321 agctggcaac aagctttcga cgaaattggc gcacgccttc aaagctatag tgatcccaat
     1381 caggttgaat tctatacttc gggccgcact tccaatgaag ctgcctttct ttatcagctt
     1441 tttgcccgtg aatacgggag caataacttt cccgactgct ccaacatgtg ccatgaaccg
     1501 accagtgtgg gtttggcagc gagtatcggc gtgggtaaag ggactgtgtt gctggaagac
     1561 tttgagaagt gcgatttagt catttgcatt gggcataacc ctggtacaaa ccacccccgc
     1621 atgctgactt cgttgcgcgc tttagtgaaa cggggagcga aaatgatcgc catcaatcct
     1681 ttacaggaac gtggcctgga gcgatttacc gcaccgcaaa acccgtttga aatgctgacg
     1741 aactctgaga ctcagttggc cagtgcgtac tacaacgtgc gcattggtgg cgatatggcg
     1801 ttgctcaagg ggatgatgcg cctgttaatt gagcgcgatg atgctgcaag tgccgcaggt
     1861 cggccctcat tgcttgatga cgaatttatt caaacgcata ccgtcggctt tgacgagcta
     1921 cgccgtgacg ttctcaattc cgagtggaaa gatatcgaac atatttctgg actaagtcag
     1981 acacaaatcg ccgaactggc tgacgcatat gccgctgccg atcgcaccat tatctgttac
     2041 ggaatgggga tcactcagca cgaacatggt acccagaatg tacagcaact ggtcaatctg
     2101 ctgttgatga aaggtaacat tggcaagcct ggtgcgggta tctgcccact acgaggtcac
     2161 tctaatgtac agggcgaccg aaccgtcggt atcaccgaga aaccgtctgc agagtttctg
     2221 gctcgcctgg gtgagcgcta tggcttcacc ccacctcatg cacctggaca tgctgcaatt
     2281 gccagcatgc aagcaatatg cacggggcag gctcgagcat tgatctgcat ggggggcaac
     2341 tttgcactgg caatgccaga tcgggaagcg agcgctgtac cgttaacgca attagatttg
     2401 gcggtacacg tagccactaa gcttaaccgc tctcatctgc tgaccgcacg gcatagctat
     2461 attctgccgg ttctggggcg tagcgagatt gacatgcaaa aaagcggtgc gcaggcggta
     2521 accgttgagg attcaatgtc gatgattcat gcctcgcgtg gcgtgttaaa acccgccggt
     2581 gtaatgctga aatcagagtg tgcagtggtc gcgggaatcg cgcaggcagc actaccccag
     2641 agcgtggtag cctgggagta tctggtggaa gattatgatc gcattcgcaa tgacattgaa
     2701 gctgtgttac cagagttcgc cgactataac cagcgcatcc gacatcctgg aggttttcac
     2761 ctgataaatg cagctgctga aaggcgctgg atgacgccgt caggtaaggc taatttcatt
     2821 accagcaaag ggctgttaga agatccctct tcagcgttta acagtaagct ggtcatggcg
     2881 acagtacgca gccacgatca gtacaacacg acgatttatg gtatggatga tcgctatcga
     2941 ggggtattcg gtcaacgaga tgtggtcttt atgagtgcta aacaagctaa aatttgccgt
     3001 gtaaaaaacg gcgaaagagt taatcttatt gcgcttacgc cagacggtaa gcgcagctca
     3061 cgccgcatgg atagattaaa agtggtcatt taccctatgg ctgaccgctc actggtgacc
     3121 tattttccag aatcgaatca catgctaact cttgataacc acgatccatt aagtggcatt
     3181 cctggttata aaagtattcc ggttgaatta gaaccatcaa attaattcgc ctcctcattt
     3241 cttctgctgt catccgcaca gcagaagaat ttctcattga ctattatcgc gcaatttgct
     3301 cacattgatc aaattaaacc acacactata agatataaac ctctgcctac agctgtaaga
     3361 aactccgctc agtactgaag tgccagtcct atttcctctt ttctccagcc tgttatatta
     3421 agcatactga ttaacaattt ttaacgttat ccgctaaata aacatatttg aaatgcatgc
     3481 gaccacagtg aaaaacaaaa tcacgcaaag agacaactat aaagaaatca tgtctgtaat
     3541 tgtggttgtc ttattactga cccttacgtt gatagccatt ttttcggcaa ttgatcagct
     3601 gggtatttca gaaatgggtc gcattgcaag agatcttaca catttcatta tcaatagttt
     3661 gcaagactga aaataaacag caaattataa atatgaaatg ttaaaaaagt atcgataaaa
     3721 actttattgt tttaaggaga taaaatgtcg ctcgtttgtt ctgttatatt tattcatcat
     3781 gccttcaacg ctaacatttt agataaagat tacgccttct ctgacggcga gatcctgatg
     3841 gtagataacg ctgttcgtac gcattttgaa ccttatgagc ggcattttaa agagatcgga
     3901 tttactgaaa ataccattaa aaaatatcta caatgcacta acatccagac agtgacggtg
     3961 cctgttcctg cgaagttttt acgtgcttca aatgtaccga ctggattgct taatgaaatg
     4021 attgcttatc tcaactcgga agaacgcaat catcataatt tttcagaact tttgcttttt
     4081 tcttgcctgt ctatttttgc cgcatgcaaa ggtttcatta cactattaac taacggtgtg
     4141 ctatccgttt ccggaaaagt gagaaatatt gtcaacatga agctggcgca cccatggaag
     4201 ctgaaagata tttgtgactg cctgtacatc agtgaaagcc tgttgaagaa aaaactaaag
     4261 caagagcaaa cgacattctc acagattcta ttagatgcca gaatgcagca cgcaaaaaat
     4321 ttgatacgcg tagaaggttc agtcaataaa attgccgaac aatgtggtta tgccagtact
     4381 tcttatttta tttatgcgtt ccgcaaacat ttcggcaaca gtccgaagag agtttctaag
     4441 gagtaccgtt gtcaaagtca cacgggtatg aatacgggca acacgatgag tgctttagct
     4501 atttgattat ttgctaacga gtagtcaacc acgcacgcta cgtaagaatt atatggggca
     4561 gccattccct gccccgcgtt gtttttaggc gatatattta ttgaaataaa taagtgacat
     4621 ccatcacata tttatgcact tgcataacct gttgcatgat tatttatgtt ctcaattcag
     4681 catcttgtca gtaaaatgca ataatttatt aaatatcaat aaattagttg tttatcggcg
     4741 agaaattact taatagaaca gaaagtaatg tcaacgcttt atggactgtt atttcccttt
     4801 ttttagctaa atctgctatc tctttatgtg actaacttca cttacatcca cttatttctc
     4861 ttcgtaaaat tacttcggaa ttaagtacaa taagaagagg aacatttatg aagtctgcat
     4921 taaagaaaag tgtcgtaagt acctcgatat ctttgatact ggcatctggt atggctgcat
     4981 ttgctgctca tgcggcagat gatgtaaagc tgaaagcaac caaaacaaac gttgctttct
     5041 cagactttac gccgactgaa tacagtacca aaggaaagcc aaatattatc gtactaacca
     5101 tggatgatct tggttatgga caacttcctt ttgataaggg atcttttgac ccaaaaacaa
     5161 tggaaaatcg tgaagttgtc gatacctaca aaatagggat agataaagcc attgaagctg
     5221 cacaaaaatc aacgccgacg ctcctttcat taatggatga aggcgtacgt tttactaacg
     5281 gctatgtggc acacggtgtt tccggcccct cccgtgccgc aataatgacc ggtcgagctc
     5341 ccgcccgctt tggtgtctat tccaataccg atgctcagga tggtattccg ctaacagaaa
     5401 ctttcttgcc tgaattattc cagaatcatg gttattacac tgcagcagta ggtaaatggc
     5461 acttgtcaaa aatcagtaat gtgccggtac cggaagataa acaaacgcgt gactatcatg
     5521 acaacttcac cacattttct gcggaagaat ggcaacctca aaaccgtggc tttgattact
     5581 ttatgggatt ccacgctgca ggaacggcat attacaactc cccttcattg ttcaaaaatc
     5641 gtgaacgtgt ccccgcaaaa ggttatatca gcgatcagtt aaccgatgag gcaattggcg
     5701 ttgttgatcg tgccaaaaca cttgaccagc cttttatgct ttacctggct tataatgctc
     5761 cgcacctgcc aaatgataat cctgcaccgg atcaatatca gaagcaattt aataccggta
     5821 gtcaaacagc agataactac tacgcttccg tttattctgt tgatcagggt gtaaaacgca
     5881 ttctcgaaca actgaagaaa aacggacagt atgataatac tattattctc tttacctccg
     5941 ataatggtgc ggttatcgat ggtcctctgc cgctgaacgg ggcgcaaaaa ggctataaga
     6001 gtcagaccta tcctggcggt actcacaccc caatgtttat gtggtggaaa ggaaaacttc
     6061 aacccggtaa ttatgacaag ctgatttccg caatggattt ctacccgaca gctcttgatg
     6121 cagccgatat cagcattcca aaagacctta agctggatgg cgtttccttg ctgccctggt
     6181 tgcaagataa gaaacaaggc gagccacata aaaatctgac ctggataacc tcttattctc
     6241 actggtttga cgaggaaaat attccattct gggataatta ccacaaattt gttcgccatc
     6301 agtcagacga ttacccgcat aaccccaaca ctgaggactt aagccaattc tcttatacgg
     6361 tgagaaataa cgattattcg cttgtctata cagtagaaaa caatcagtta ggtctctaca
     6421 atctgacgga tctacagcaa aaagataacc ttgccgccgc caatccgcag gtcgttaaag
     6481 agatgcaagg cgtggtaaga gagtttatcg acagcagcca gccaccgctt agcgaggtaa
     6541 atcaggagaa gtttaacaat atcaagaaag cactaagcga agcgaaataa ctaaaccttc
     6601 atgcggcgga attttccgcc gccttattga gcgagatagc gatgcacgtt acagccaagc
     6661 cctccagttt tcaatgtaat ctcaaatgtg attactgttt ttaccttgaa aaagagtcgc
     6721 agtttactca tgaaaaatgg atggatgaca gcactctgaa agagttcatc aaacaatata
     6781 tcgcagcgtc tggcaatcag gtctatttta cctggcaagg cggtgaaccc actctggctg
     6841 gcctggattt tttccgtaaa gttattcact atcaacaacg ctatgcaggc caaaaacgta
     6901 tttttaatgc attacaaacg aatggcattt tattgaataa tgaatggtgt tcctttctca
     6961 aagaacatga atttctggtt ggtatctcga tcgatggccc ccaggagtta catgaccgtt
     7021 acagacgcag taattcaggt aacggtactt ttgcaaaagt gatagcagcc atcgagcgtc
     7081 tgaaatcata tcaagttgag tttaatacgt taaccgtcat taataacgtt aatgtccatt
     7141 accctcttga ggtttatcat tttttaaaat ctatcggcag taaacatatg caatttatcg
     7201 aattgctcga aaccgggacg ccgaatattg atttcagtgg tcatagtgag aacacattcc
     7261 gtatcattga tttttctgtg cctcccacgg cttatggcaa gtttatgtca accattttta
     7321 tgcaatgggt taaaaacgat gtgggtgaaa ttttcattcg tcagtttgaa agctttgtca
     7381 gccgtttttt ggggaatggg catacaagtt gtattttcca ggagtcctgc aaggataatc
     7441 tggttgttga aagtaatgga gacatttacg aatgcgacca ttttgtctat ccacagtaca
     7501 aaattggaaa cattaataaa tctgaactca aaacgatgaa cagtgtacaa ctgacagcgc
     7561 aaaaaaaacg gatttcagcg aaatgtcagc aatgtgcata taaacctatc tgcaatggcg
     7621 gttgtcctaa gcatcgtatt actaaagtaa acaatgagac tgtttcttat ttttgcgaag
     7681 gttataaaat ccttttttca accatggtac cttatatgaa cgccatggtt gagttagcta
     7741 agaacagagt accgctttac cacattatgg atgttgcaaa acaaatggag aataattaat
     7801 aacgctctct tttaactcca ttcttagcct ccttcttatg accttaacaa ggcacccgac
     7861 ataaattcct gtcgggtgtt tcgtcatcat catcttccct tgcgaaaatc ctggcttacg
     7921 tggtatgcgt cagggcatta gcaataccct tgattatcaa tagcataacc ataaccataa
     7981 ccataaccat aaccataacc ataaccactg aaaattaaaa atttctatat atttcatatt
     8041 gttaaatgat acttaaataa atttcatcag taaatcattg ccatagataa tcattggatg
     8101 gcacaatcaa ttttcgctaa tgataaccat tcccattacg ttttgtatgt tgatagcaaa
     8161 gtatctctgt ctgctgaagc ccttttggct gcgtaagaat aataaaactt cagtgttgtt
     8221 aatcattatt atcctcgcaa tgatccttgg cgtggttaaa attcaggtct ggttaaacga
     8281 ctggaataat gattttttca atgcgctaag ccagaaagaa accgataagc tttggcagct
     8341 tgttctttgg ttccctgccc tgctggggat ctttgtatta atatccgtaa acaaaacatg
     8401 gttaattaaa ctactgacta ttcgctggcg cgaatggtta acagattact accttaatcg
     8461 ctggtttgca gataaaaact actacttcac gcagatctac ggcgagcata aaaatacaga
     8521 taaccctgac caacgtatcg ctgaagacat tctcttactg atcagcaaaa cgctcagtct
     8581 ttcatttggc ttcatccagt cacttagcat gctgatcacc tttaccgtta ttctttggca
     8641 aagcgcgggt acgctctcat tcactgttgg tggaacagaa tggaatatcc aggggtatat
     8701 ggtctatacc gtcgtgctca ttgtgatcgg tggaacttta tttacccata aggttggtaa
     8761 gcgtattcgt ccgcttaatg tggaaaaaca acgtagcgaa gcgacatttc gaactaatct
     8821 tgtgcagcat aataagcagg cagaactgat tgcgctaagc aatgctgagt ctctacaacg
     8881 ccaggagttg cgcgacaatt ttcataccat taaagagaac tggcatcgtt taatgaatcg
     8941 tcagcggtgg cttgattact ggcaaaatat ttattcgcgc tcgcttagcg ttcttcccta
     9001 ctttctgtta ttgccgcagt ttattagcgg gcagatcaat ctgggcggac tgatgaaatc
     9061 gcgccaggca tttatgctag tatcgaacaa tttaagctgg tttatttata aatatgacga
     9121 acttgctgaa ctggctgcgg ttatcgatcg cttgtatgag ttccatcaac tcactgaaca
     9181 gcgccctacg aataagccta aaaattgcca acatgcggta caagtggcta atgcgagtat
     9241 tcgtacgcct gataataaga tcatattaga gaacttgaac tttcatgttt cgccaggcaa
     9301 atggctatta ctgaaaggct actctggtgc gggaaaaacc acactgctta aaacattatc
     9361 ccactgctgg ccgtggttta aaggtgatat tttttctcct gctgacagtt ggtatgtgtc
     9421 acaaacaccg ttaatcaaaa ccggcttact gaaagagatt atttgtaaag cacttcccct
     9481 gcccgtagac gataaatcgt tgagcgaagt actgcatcag gttggtcttg ggaaattggc
     9541 tgcgcgtatt catgaccacg atcgctgggg agatattctt tccagcggcg aaaaacaacg
     9601 tatcgccctg gcacgattaa ttttacgacg tccgaaatgg atatttcttg acgaaactac
     9661 ctctcatctt gaggaacaag aggctatccg cttactgcgt ttagtgcgtg aaaaactacc
     9721 cacaagcggc gtcattatgg ttacacatca acccggtgtc tggaacctgg ccgatgatat
     9781 ttgtgacatt agcgcggttt tataaaaaca ataaaagccc tgctgtacgg agatataaat
     9841 aaatgaagcg agttcttatt cctggcgtca ttttatgtgg cgctgatgtg gcgcaggccg
     9901 tcgatgacaa aaacatgtac atgcattttt ttgaagagat gacggtctat gctcctgtcc
     9961 ctgtacccgt aaacggcaac acgcattaca ccagtgaaag catcgagcgt ttaccgaccg
    10021 ggaatggcaa tatcagcgat ctgctgagaa ccaaccctgc ggtacgcatg gattcaacgc
    10081 aaagtacctc gttgaaccag ggagatattc gccctgagaa aatctctatt cacggtgcgt
    10141 cgccctacca gaatgcctat ttgattgacg gtattagtgc aactaataac ctgaacccag
    10201 cgaatgagtc cgatgccagt agtgcaacca atattagcgg gatgtcacag gggtattatc
    10261 ttgatgtcag cttactggac aatgtgacgc tttatgacag ttttgtgccg gttgaatttg
    10321 gtcgcttcaa tggcggggta attgatgcaa agatcaaacg cttcaacgct gatgatagca
    10381 aggtgaaatt gggttatcgc actacgcgtt cggactggtt aacatcgcat atcgatgaga
    10441 ataacaagag cgcatttaat caaggttctt caggaagtac ttatttctct ccagatttta
    10501 aaaagaactt ttataccttg tcgtttaatc aggagctggc tgataacttt ggcgttaccg
    10561 ccggtttatc gcgccgccag tctgatatca cccgcgcgga ttatgtttcg aatgacggca
    10621 ttgtcgtcgg tcgggcacag tataaaaacg ttatcgatac tgcattgagc aaatttacct
    10681 ggtttgccag cgaccgcttt acccacgatt taaccttaaa atataccggc tccagccgtg
    10741 attataatac cagcaccttc ccgcagtctg atcgcgaaat gggtaataaa tcctatggtc
    10801 ttgcatggga tatggatacg caactcgcat gggccaaact acgtaccacc gttggttggg
    10861 atcatattag tgattatacc cgtcacgatc atgacatctg gtacaccgaa ctttcatgta
    10921 catatggtga tattacaggg cgttgtaccc gtggcggatt aggacacatt tcccaggctg
    10981 tagataatta caccttcaaa acacgcctgg actggcaaaa attcgccgtg ggtgatgttt
    11041 cgcatcaacc ctactccggc gcggaataca tctattccga tgcatggact gaacgccata
    11101 accagtctga atcctatgtg attaatgctg caggaaagaa aactaaccat accatttacc
    11161 ataaaggtaa aggcagccta ggaattgaca actacacgct gtatatggcg gatcacatta
    11221 gctggcggaa tgtgtcgtta atgcccggtg tgcgttatga ctatgacaac tatctgtcaa
    11281 accacaatat ctccccgcgc tttatgacgg aatgggatat ttttgctgat caaacctcaa
    11341 tgattaccgc cggttataac cgttactatg gcgggaatat tcttgatatg ggattacgtg
    11401 atatccgcaa tagctggacg gaatcggtat caggtaataa aaccctgacg cgttatcaga
    11461 atttgaaaac gccttataac gatgaactgg caatgggatt gcagcaaaaa atcggtaaga
    11521 acgttattgc acgcgcaaac tatgtttacc gtgaagcgca tgatcaaatc agcaaaagca
    11581 gtcgtaccga cagcgcgact aaaaccacca ttactgaata taacaacgat ggcaaaacca
    11641 aaacgcattc gtttaacctc agttttgaac tggccgaacc cctgcatatc cgccaggtag
    11701 atattaaccc gcaaattgtc tttagctata tcaagagcaa gggcaacttg tcgttaaaca
    11761 atggttatga ggagagcaat accggtgata accaggtggt ttataacggt aatctggtct
    11821 cttacgatag cgttccagtg gcagatttta ataacccatt aaagatctcc ttaaacatgg
    11881 atttcacgca tcaaccgagc gggttagtgt gggcgaatac gctggcgtgg caagaagcgc
    11941 gtaaagctcg cattatcctt ggtaagacaa atgcgcaata catcagcgaa tattcagatt
    12001 acaagcagta tgttgacgaa aaactggata gcagcctgac ctgggacacc cgcttgtcct
    12061 ggacgccaca atttctgaaa caacaaaacc tgacgatcag tgccgatatt ctcaatgtac
    12121 tggatagcaa aaccgctgtt gatacaacga ataccggtgt ggcgacctac gccagtggcc
    12181 gtactttctg gcttgatgtc agcatgaaat tttaatagtt cggattttac ttaaccgggt
    12241 aaattcgccc ggttttcgca tggagataat tatgagaaac ctctgtttct tactgacgtt
    12301 agtggcaact ctgttgctcc ccgggcggct gattgccgcc gccttaccgc aggatgaaaa
    12361 gttaattacc gggcaactgg acaatggctt gcgatatatg atttatccgc atgctcaacc
    12421 aaaggatcag gtaaatttat ggctgcaaat tcataccggt tcattgcagg aagaagacaa
    12481 tgagcgcggc gtggctcatt ttgtagaaca tatgatgttt aacggcacaa aaacatggcc
    12541 gggtaataaa gtcatcgaaa catttgagtc aatgggcctg cgttttggtc gcgatgttaa
    12601 tgcctatacc agctatgacg aaacggtgta tcaggtgagt ttgccgacta cgcagaaaca
    12661 aaatctgcaa caagtgatgg caatcttcag tgaatggagt aatgccgcaa cctttgaaaa
    12721 actcgaagta gacgctgaac gtggcgtaat tactgaggaa tggcgtgccc atcaggatgc
    12781 gaaatggcgc acctctcagg cgcgccgccc tttcctgctg gctaataccc gtaatttaga
    12841 ccgtgaacct atcggcctga tggatactgt cgccacggtc acaccggcac aattgcgcca
    12901 attttatcaa cgctggtatc aaccaaataa tatgaccttt atcgtggtcg gcgatatcga
    12961 cagtaaaaaa gcgctggcgc tgataaagga taatttaagt aagcttccgg ctaacaaagc
    13021 agctgaaaat cgcgtctggc cgacaaaagc cgaaaaccac ctgcgcttta atatcattaa
    13081 tgataaagaa aaccgggtga acggcatcgc actctattat cgcctgccaa tggtacaagt
    13141 gaacgatgag caaagcttta tcgaacaagc tgaatggagc atgttagttc agctgttcaa
    13201 tcaacgtctg caggaacgca tacagtcggg cgagttgaag actatttctg gcggcactgc
    13261 gcgcagcgtt aaaattgcac ccgattatca gtcgctgttt ttccgtgtaa atgcacgaga
    13321 cgataatatg caggatgctg cgaatgcatt aatggcagag ttggcaacca ttgatcagca
    13381 tggtttttct gctgaagaac tcgatgatgt caaatctacc cgcctcacct ggctgaaaaa
    13441 tgcggttgat cagcaagctg aacgtgattt acgtatgctg accagtcgcc tggcatccag
    13501 ctcattaaat aatacgccgt tcttgtcgcc ggaagagaca tatcaacttt cgaaacgtct
    13561 gtggcagcaa attaccgtgc aaagtctggc ggaaaaatgg cagcagttaa gaaagaacca
    13621 ggacgcattt tgggagcaaa tggtaaacaa tgagcttgcc gccaaaaaag cattgtctcc
    13681 tgcggctatc ctggcgctgg aaaaagagta cgccaacaaa aagctggcgg cttacatctt
    13741 cccaggcaga aatttatcgt taacagtaga cgctgaccca caggcggaaa ttagcagcaa
    13801 agaaacgctg gctgagaatc tgacatcatt aacactttcc aatggtgcca gggttattct
    13861 ggcaaaatcc gcgggtgaag agcaaaagct acaaattact gccgtatcga ataaaggcga
    13921 tttaagtttc cctgcgcagc aaaaatcact tatcgcgctg gcaaataaag cagtaagcgg
    13981 aagcggcgtt ggtgagctct cctcttccag cctgaaacgc tggagtgcgg aaaattcggt
    14041 aaccatgagc agtaaagtca gtggcatgaa tacgttgctc tccgttagcg cgcggactaa
    14101 taaccctgaa cctggttttc agttgattaa ccagcgaatc acccacagca cgattaacga
    14161 caatatttgg gcatcgctac aaaatgctca aattcaggcg ttgaaaacgc tcgaccagcg
    14221 tccagcggag aaattcgccc agcagatgta tgagacgcgc tatgctgatg accgcacgaa
    14281 attactgcaa gaaaatcaga ttgtacagtt tactgccgca gatgcgctgg ctgccgatcg
    14341 ccagttgttt tcatctccag cggatatcac gtttgtcatt gtcggtaatg tctcagaaga
    14401 caaactcgtg gcgttaatta cgcgttactt aggatcaatc aaacactctg attcgccatt
    14461 agccgcaggt aaaccattaa ctcgcgcgac ggacaacgca tcggttactg taaaagaaca
    14521 aaatgaacct gtggcacagg tttcacagtg gaagcgttat gattcccgga cacctgttaa
    14581 tctggcgacg cgtatggcgc tcgatgcttt taacgtcgca ctggcaaaag atctacgtgt
    14641 taatattcgt gaacaggcat ctggagcata cagcgtttct tctcgcctct cggttgatcc
    14701 tcaggccaaa gatatcagtc atttgctggc ttttacttgt caaccagaac gacatgatga
    14761 actgttaacg ttggcgaatg aagtgatggt taagcgtctg gctaaaggga tcagtgagca
    14821 agaactgaat gaataccagc aaaacgttca gcgcagcctc gatatccaac agcgtagcgt
    14881 tcaacaatta gcgaacacta ttgtaaatag tcttattcaa tatgacgatc ctgcagcatg
    14941 gactgagcag gagcaattgt tgaaacaaat gacggtagag aatgttaaca ctgccgttaa
    15001 acaatatctt tctcatccgg taaatactta taccggagta ttattgccaa aataataaca
    15061 gccccgtcaa cacatcgttg gcggggattt tagcaatatt cgctattttt atgtaataat
    15121 tttataaatg cgttcaaaat aataatcaag tactaatagt gatattttga ggtctgattt
    15181 ttacgtgata attcaggaga cacagaatgc gcataaaaat aacagcataa aacaccttac
    15241 caccacccaa gaatttcata ttgtattgtt tttcaatgaa aaaacattat tcgcgtaata
    15301 tctcacgata aataacatta ggattttgtt atttaaacac gagtcctttg cacttgctta
    15361 ctttatcgat aaatcctact tttttaatgc gatccaatca ttttaaggag tttaaaatgg
    15421 ataagaagca agtaacggat ttaaggtcgg aactactcga ttcacgtttt ggtgcgaagt
    15481 ctatttccac tatcgcagaa tcaaaacgtt ttccgctgca cgaaatgcgc gacgatgtcg
    15541 cattccagat tatcaatgac gaattatatc ttgatggcaa cgctcgtcag aacctggcca
    15601 ctttctgcca gacctgggac gacgaaaatg tccacaaatt gatggattta tccattaa
//
LOCUS       DADKRT010000098        15611 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.099, whole genome shotgun sequence.
ACCESSION   DADKRT010000098 DADKRT010000000
VERSION     DADKRT010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15611
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.099"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..603
                     /locus_tag="JQ356_002560"
                     /pseudo
     CDS             1..603
                     /locus_tag="JQ356_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490532.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            817..1965
                     /locus_tag="JQ356_002561"
     CDS             817..1965
                     /locus_tag="JQ356_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY4622610.1"
                     /translation="MFEIDSLLLITSVIILSLLAVKLFDEISPIQLVDHGRNNQIDGM
                     RGFLAIFVLIHHAAIWHGYLLTGVWKTPSSNLLTNLGQVGVSFFFMITGYLFFSKIRS
                     SDQDWVRLYISRFLRLTPMFIVSLCLVLLVIGFKSRWSVHVSPASLTVSLMRWAPFTA
                     LGMPNINGVKDSFTINAAVTWTLVYEWFFYFSLPVIAALFKRRVSIHMIIISVLVLVI
                     FLCYPSKKIHVISFLFGLLASYSNNYVHRVAKAKITPIMIIALLSYEMIYFPTTYAPL
                     PLIICGVCFILIASGCDFYGILRLNLTRKLGETTYSIYLLHGVFLYCVMTWVIPSNYS
                     NYFFIMLISITAFCVTLLSCITFKLIELPFINITKQTAMKIRGIIKNT"
     gene            complement(2245..2856)
                     /locus_tag="JQ356_002562"
     CDS             complement(2245..2856)
                     /locus_tag="JQ356_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001057695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4622611.1"
                     /translation="MNNAELNSELIATMAGEITVYNFDVMSREYISASTEYLAIGVGI
                     PAYSCLDAPGAYKAGYAICRSADFNSWEYVPDHRGEIVFSTETGESKEITAPGDYPDN
                     TTTIVPLTPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDTAMASINLIQLKLQAG
                     RNLTQAETSRLNTVLDYIDAVTATDTSTAPDVIWPELLDAHNM"
     gene            complement(2856..3638)
                     /locus_tag="JQ356_002563"
     CDS             complement(2856..3638)
                     /locus_tag="JQ356_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY4622612.1"
                     /translation="MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQ
                     EELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVKTALENLGLGEG
                     SALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDD
                     GRGVDNGRGLLTLQDGAIVSHNHYWGIWTSRTNDQTLESFTGTTILKQITPLSPSIDF
                     DNYPIPNPAITEGGVVAATTKPAGANETRPRNVAFNYIVRAA"
     gene            complement(3642..4226)
                     /locus_tag="JQ356_002564"
     CDS             complement(3642..4226)
                     /locus_tag="JQ356_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HAY4622613.1"
                     /translation="MDVTNDDYIRLLSALLPPGPAWSASDPAIAGAAPSLTRVHQRAD
                     ALMQELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFY
                     LAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGD
                     PCDSALRFWGDTVVECVLNKLCPSHTYVIFKYPE"
     gene            complement(4217..5275)
                     /locus_tag="JQ356_002565"
     CDS             complement(4217..5275)
                     /locus_tag="JQ356_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001536648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HAY4622614.1"
                     /translation="MADSEFQRPTLAENISMLRNDLFARLDVSDTLRRMDEDVRAKVY
                     AAALHTVYGYIDYLAMNMLPDLCDESWLARHAAMKRCPRKGATVASGYMRWEGVSDGL
                     KVTAGSVIQRDDLVQYTTTDDAISSGGVLRVPIACSSAGAVGNADDGTALILVTPVNG
                     LPSSGVADTLTGGFDTEELETWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTY
                     RHWMGTGTVGVMIASSDLINPIPEESTETAARQHIGPLAPVAGSDLYVFRPVAHTVDF
                     HIRVTPDTPEIRAAITAELRSFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPAD
                     NITIAKNELAVLGAISWT"
     gene            complement(5262..5687)
                     /locus_tag="JQ356_002566"
     CDS             complement(5262..5687)
                     /locus_tag="JQ356_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622615.1"
                     /translation="MELWLTVNGKRTCASAPLDPLTRAVVISLFTWRRAEPDDNADVP
                     MGWWGDTWPAVQNDRYGSRLWLLQRSKLTNQLVQTVRGYIRECLQWMTDDGVVSRIDL
                     DIRRTGINELGNSITLRRRDGPVMISFDDLWSAITHGGQ"
     gene            complement(5687..6235)
                     /locus_tag="JQ356_002567"
     CDS             complement(5687..6235)
                     /locus_tag="JQ356_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015364403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein"
                     /protein_id="HAY4622616.1"
                     /translation="MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAG
                     VEHLEPYGFTARANSGAEAVVLFPDGDRSHAVVVTVSDRRYRLKGLQTGEVAVYDDQG
                     QSVTLTREGIVVDGAGKTITFRNAPEARFEMDLEVTGQVKDLCDSGGTTMSAMRLAYN
                     GHRHRENGQGSNTDKPDKAMEA"
     gene            complement(6235..7314)
                     /locus_tag="JQ356_002568"
     CDS             complement(6235..7314)
                     /locus_tag="JQ356_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate protein"
                     /protein_id="HAY4622617.1"
                     /translation="MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGD
                     EGITTLQPRIKNGSKVEVLIGDELVITGWVEATPVRYDARSVSTGIAGRSLTADLIDC
                     AAEPTQFNGRSLVQIAQALAAPFGIEVVNSGAPSGVIPDVQPDHGETVIEVINKILGQ
                     QQALAYDDPHGRLVIGGIGSTRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGN
                     DDDFGEATTTALRARTEDAFIARYRPMYIRQTGQATGAGCIARADFEARKRAARTDET
                     TYVVQGWRQGNGTLWQPNQRVIVFDPVCGFDNTELLVSEVTFTQDQNGTLTEIRVGPP
                     DAYLPEPEAPGARKKKKARVQEDPF"
     gene            complement(7311..8639)
                     /locus_tag="JQ356_002569"
     CDS             complement(7311..8639)
                     /locus_tag="JQ356_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HAY4622618.1"
                     /translation="MTWKDRLQDASFRGVPFKVEEESAGTGRRVETHEYPNRDKPYTE
                     DLGKITFRPSITAYVVGDDCFDQRDRLIDALNKPGPGTLVHPTYGELKVCVDGEVRVS
                     TSKSEGRIVRFDLKFVEAGELSYPTSGAATAQTLMSSCSALDDCISDSFSGFSIDGVA
                     DFVQNDVVGNASTMLGYVSDAMKVVDSAVSDAARLLQGDISVLLPPPSSGKNFVEQVQ
                     KMWRTGKRLYGNASDLVTMIKTLSGVSLGSDLQPRGVWKTDSKTTATATQQRNVVAST
                     LRTTAISEAAYAVTRLPAPTTSAVMQNATVGQSTTPAQSTGWPSVTHPALNNAPAVKN
                     TVDLPTWEELTDIRDTLNTAIDKELSRTTSDALFLALRRVKADLNADINTRLEQSARI
                     IQRTPDEVLPALVLAATWFDNAARDADIIRRNAITHPGFVPVIPLKVPVQ"
     gene            complement(8700..10535)
                     /locus_tag="JQ356_002570"
     CDS             complement(8700..10535)
                     /locus_tag="JQ356_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY4622619.1"
                     /translation="MAEFELKALITGVDRLSPALSKMQKKIRGFKRQAEEASQGGLAL
                     GGGLAAGLTLSLKSYADQENAATGLKVAMMDANGEVGKSFQDINKLAIGLGNQLPGTT
                     ADFQNMMQMLVRQGIPAENILGGVGKATAYLAVQLKKTPEAAAEFAAKMQDATGTASE
                     DMMGLFDTIQKAFYLGVDDTNMLSFFTKTSSVLKMVNKDGLQAAQSLAPISVMMDQMG
                     MNGESAGNALRKVIQSGLSVKKIRDVNKIMARQKLGVQLDFTDGKGSFGGLDNMFRQL
                     AKLRKLTDVKRTGVLKAIFGDDAETLQVVNALIDKGKDGYDQIQQKMNKQASLNKRVQ
                     AQLGTLSNLWEAMTGTATNGLAAIGGAFSGDAKNITQWLGELGEKFTKFADENPRVIR
                     GVVGLAAGLAILKLGLMGVGGAISIVSRIMSMTPIGMIATAIALAAGLIITNWDVVGP
                     YFKKLWETIGPYFEAGWELLKKVFAWSPLGMVINNWGPVVKWFQDMWDKLKPIIEWFT
                     DSSGDTVDAINSAQWGAGAYDAYGTGIPARGYTPYQAVDPAQSNNASGATGPNPFMIN
                     KASAPKVDGEIKVSFVNSPPGMRVMETRSSGFDVSHDVGYTRFGR"
     gene            complement(10677..10946)
                     /locus_tag="JQ356_002571"
     CDS             complement(10677..10946)
                     /locus_tag="JQ356_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001526907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HAY4622620.1"
                     /translation="MKELELKKPITAHGETLSVLEFDEPTGKDVRELGYPYQMNQDES
                     VRLLAHVVSKYIVRLAKVPQSSVDQMSPADLNAAAWLVAGFFLQA"
     gene            complement(10946..11302)
                     /locus_tag="JQ356_002572"
     CDS             complement(10946..11302)
                     /locus_tag="JQ356_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622621.1"
                     /translation="MARIGGTCYFKIDGQQLSLTGGIEVPMNKTVNDDIIGLDGSVDR
                     KETHRAPYVKGTFKVPKNFPVSKITSSDEMTITAELANGQVYVLSSAWLHGEANHNAE
                     EGTVDLEFHGEEGDYQ"
     gene            complement(11302..12798)
                     /locus_tag="JQ356_002573"
                     /pseudo
     CDS             complement(11302..12798)
                     /locus_tag="JQ356_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000155750.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            complement(12782..12952)
                     /locus_tag="JQ356_002574"
     CDS             complement(12782..12952)
                     /locus_tag="JQ356_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000497758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HAY4622622.1"
                     /translation="MFVKPVKGRSVPDPARGDLLPAEGRNVDENNYWLRREAAGDIRR
                     VNKKVNTDDDKL"
     gene            complement(12979..13521)
                     /locus_tag="JQ356_002575"
     CDS             complement(12979..13521)
                     /locus_tag="JQ356_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622623.1"
                     /translation="MKLTPVIAALRARCPYFENRVAGAAQFKNLPEVGKLKLPAAYVV
                     PGDDSPGENKSQTDYWQELKEGFSVVVILSNGRDERGQFASYDVVDDVRQMLFKALLG
                     WNPEACGNPITYDGGTLLDLNRHELIYQFDFSVISELTEDDTRQQDDLNSLDELQTLA
                     IDVDYLEPGNGPDGDIEHHT"
     gene            complement(13518..14024)
                     /locus_tag="JQ356_002576"
     CDS             complement(13518..14024)
                     /locus_tag="JQ356_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001501060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622624.1"
                     /translation="MATPFFHVDVQQPAEMRFNRARVRRAFVTIGQRHMRDARRLVMR
                     RARSAPGENPGYQTGRLARSIGYMVPRASKKRAGFMTRIAPNQRNGKGNRMISGDFYP
                     AFLFFGVRGGAKRRRSHHRGASGGSGWRLAPRNNFMVETLEKNRSWTRYFLARELRKS
                     LKPERRHR"
     gene            complement(13999..14409)
                     /locus_tag="JQ356_002577"
     CDS             complement(13999..14409)
                     /locus_tag="JQ356_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000702387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HAY4622625.1"
                     /translation="MKIRQAQTSATYILPDPGELNKRVLIRQRVDMPADNFGVEPQYP
                     VTFRTWAKVIQTSATTWQETAQTGDAITHYITIRYRRGITADYEVVCDDSVYRVKRQR
                     DLNGARRFLLLECTELGECRQSHGGSNGDSLFSR"
     gene            complement(14406..14729)
                     /locus_tag="JQ356_002578"
     CDS             complement(14406..14729)
                     /locus_tag="JQ356_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001492759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HAY4622626.1"
                     /translation="MLLTMEEIKAQLRLDEDFDADDRHLQLLACAAQKRTETYLNRKL
                     YAPDETIPDSDPDGLHLPDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPY
                     RYFPQ"
     gene            complement(14732..14932)
                     /locus_tag="JQ356_002579"
     CDS             complement(14732..14932)
                     /locus_tag="JQ356_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001735262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622627.1"
                     /translation="MILKQDLKWSPDGMRVEVIRAGEYDDGALPARVQEIALQAGLAE
                     RGTSAKSSKATKEKKATTSKEG"
     gene            complement(14981..>15611)
                     /locus_tag="JQ356_002580"
     CDS             complement(14981..>15611)
                     /locus_tag="JQ356_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HAY4622628.1"
                     /translation="PQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKP
                     KGFLANESTDETDKVRAFGKLQHIVSGDATAVTADAIIKLIYTLRKAHRTGAKFMMNN
                     NSLFAIRLLKDSEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKR
                     GYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAVA"
BASE COUNT         3586 a         4437 c         3763 g         3825 t
ORIGIN      
        1 cccgcaccaa cgctgaaaat caaagacccg cactatgatg aaaagcacct tgctattgag
       61 caggcgctga ctcaggggca gacgaaacat cctgtgtttt atcaggatga agtcgacatc
      121 gacctgaata cgaaaatcgg cgtggactgg atgcccaaag ggcaacagaa acgcatcgct
      181 acgccgggac agaacctgaa gcattatctg gctggcgcac tgcactcagg tacgggacgg
      241 gttcactagg ccagtggcag cagcaaaagt tctgatttat ttatcagtct gttagaggca
      301 ttacggcgta gatatcggcg ggcgaaaacc atcacactgg tggcggataa ctacatcatc
      361 cataaaggcc gtaaagtgga gcgatggctg gaagaaaacc cgaagttccg gttgctgttc
      421 ctgccgacgt attcaccgtg gctgaatccg atagagcaac tttggttatc gttacacaag
      481 accataacgc gaaatcatca gtgccggtat atgtggcaga tactgaaaca ggtaacgcag
      541 tttatgaatg ctgctttacc gtttccgggt aatcaacacg gtatggccaa agtggagcgg
      601 taatatgcga agctatttag attcagtttg aatctcagcc ctgacattca ttctttaccg
      661 acgttccatt agcccaaatc tgagtatata acctcaattc aactgactaa atttaacaca
      721 atatcaatga caaatgtctt taccattggt acatacaatt gcaaaatcac catctctaag
      781 caataagact acgcatatta aagtgagtta tattaaatgt ttgaaattga tagcctatta
      841 ttaataacat ccgtgataat cttgtcatta ttggctgtaa aattatttga tgaaatttct
      901 cctatacaac ttgtcgatca tggaagaaat aatcagatag atggaatgag aggattctta
      961 gccatcttcg tacttattca tcatgccgct atttggcatg gctacttatt aaccggggta
     1021 tggaaaactc cgtcatcaaa cttattaaca aatttaggcc aagttggtgt ctcattcttt
     1081 ttcatgatca ccggatatct atttttttcg aagattcgct caagtgacca ggattgggta
     1141 agactatata tatcgagatt tctgcgatta actcctatgt ttattgtaag tttatgttta
     1201 gttcttcttg ttataggttt taaatcaaga tggagcgtac atgtctcccc tgcctctctt
     1261 actgtgtcac tcatgagatg ggcaccattc accgcattag ggatgccaaa tattaacggt
     1321 gttaaggact cattcactat caatgcagct gtaacatgga ccctcgttta cgaatggttt
     1381 ttttattttt cattaccggt tatagctgca ctcttcaaaa gaagagtcag catccacatg
     1441 attataataa gtgttttagt tctagtgatt ttcttatgtt acccatcaaa aaaaatacat
     1501 gttatttcat ttttatttgg actgttagcc tcttattcaa ataattatgt acatagagtt
     1561 gctaaagcta aaataacgcc tattatgata attgcattac taagttacga aatgatatat
     1621 tttcctacaa cctacgctcc actccctctc ataatttgcg gtgtttgctt tatacttatc
     1681 gcatcaggct gtgattttta tggtatattg agattaaatt taacaagaaa acttggtgaa
     1741 acaacatata gtatttatct tttacatgga gtattccttt attgtgtaat gacatgggtc
     1801 atccctagta attattctaa ttattttttt attatgttaa taagcattac tgctttttgc
     1861 gtcacacttt tatcatgcat aacatttaaa ttaattgaac tacctttcat taatataaca
     1921 aaacaaaccg ctatgaaaat caggggcata ataaaaaaca cttagtaatc aattgtcacc
     1981 taatcaagag gtggtttata gataacaata aagaaccttc gccatttccg gaggttcttt
     2041 tatatcctta tggtaaatat aaattataaa tattattttt atggtgttcc actatgaaca
     2101 gggaagctaa ataatgatta caaaaatatg taacttcagg caatgcaggg gctatgttat
     2161 tgccttaaca ccataatgag taatattgtg tcccgaggat aaaagtactg ttaattctta
     2221 ttgatgcttc aatagcactc aaaatcacat attatgtgca tccaacaact caggccagat
     2281 gacatccggc gcggtgctgg tatctgttgc cgtcaccgcg tcaatgtaat ccagcaccgt
     2341 gttaagtcgg ctggtttctg cctgcgtcag attccgtccg gcctgtaatt ttagttgaat
     2401 cagattgatg gaagccattg cagtatcaat cagcgactgg cgttgtgctt ctgctgcatc
     2461 gactgcggcg ctatgttgtg cctcggtatc cgtcacccat ttctcaccat cccatttatc
     2521 gtatggtgtt aacgggacga tagtggttgt attatcaggg taatcacccg gagctgtgat
     2581 ttcttttgat tctcctgttt cggtgctaaa gacgatttca ccgcgatggt ctggcacata
     2641 ttcccatgag ttaaaatctg cagaacggca gattgcataa ccagctttgt atgcgcctgg
     2701 agcatctaaa caggaatatg ccggaatgcc gacaccaata gcaagatatt cagttgaagc
     2761 tgaaatatac tcccgactca tgacatcaaa gttataaaca gtaatttctc ctgccatagt
     2821 ggcaattaat tcactgttta attctgcgtt attcattatg cagccctcac aatatagtta
     2881 aaagcgacat ttcgtgggcg tgtttcattc gcacctgcag gtttagtcgt tgccgcaaca
     2941 acaccaccct ctgtaatagc cgggttggga attgggtaat tatcgaagtc aatggacgga
     3001 gacaggggcg tgatttgttt taaaatcgtg gtgcctgtaa aactttccag agtctggtcg
     3061 ttagttcgtg aagtccagat tccccaatag tggttatgac tgacaatagc accgtcctga
     3121 agcgttaata atccccttcc gttatccact ccacgcccgt catcccagcc ccgaataaac
     3181 tcaccgcgta aatcaggtaa tttatttgtc ggataagcct ttgccagttc cgggtattct
     3241 tcagcagaaa aagctgctcc gttgcatttc agccagcctg ttggcggagt ggctgaaggc
     3301 cacggaacag gcacaccaac gggtaatgct gagccttctc ccaaaccaag gttttcgaga
     3361 gctgttttca ccgtgccatc cgatttgata tcgccaaacg gattcttgcg gcttaacagc
     3421 agcgcacgaa gcgcggtaag cagctggtca tgccgcccct tctccaggct ggcaccggat
     3481 gcctccacaa cgctgcaaag ctcctcctgc aacatgtcaa agtagtcatc atccagatcg
     3541 gtggcaggcg tgccggtctg ggggttacca cgggtaaaac cgttcttacc cgcgccgaac
     3601 ttatccttct gcgcggtttt cgtgtctata cgatgcatgg attactccgg atatttaaaa
     3661 atcacatagg tatgcgacgg gcagagtttg ttaagaacac actcgacaac ggtgtccccc
     3721 cagaagcgca gcgcggaatc acagggatcg ccacatgtca tccaggtggt gttggtggcg
     3781 gctggcatgt tgacctgcca gtaataccgc cattccggcg cattcaccgc gtcagtacag
     3841 gcagatgagc aggtgaacgt gcttttgtcg tatcgcgtga tggtggcgtc tggtctgccc
     3901 aaggcagcaa gctgtgcaag gtaaaaatcc tcattgatgc cgcccgccag gttaaccttc
     3961 gcatccagcc gttgctgacg ctggcgaagg gtctgcgtcc ctgccggaat acattcatcc
     4021 ggcaggccgc acagacgctc ccagcggttt atcagttcgg tggtggtgcg cggatccagc
     4081 tcctgcatca gggcatccgc acgctgatga acacgggtta atgacggtgc cgcaccggca
     4141 atcgccggat cgctggctga ccacgccgga ccgggcggca acagtgctga caacagacgg
     4201 atgtaatcat cgtttgtcac gtccatgaaa tcgcccccag aaccgccagt tcatttttcg
     4261 caatggtgat attgtccgcc ggtgcaagca actgatggct gtattccccg ttcgcaccgg
     4321 aaatcgcttc actgatacgt gacaccttca gttctccctg cggataacca tcacgcagca
     4381 ggaacgaacg caactccgcg gtgatggcag cccgtatttc cggtgtgtcc ggcgtcacac
     4441 ggatatgaaa atccaccgta tgtgccaccg gcctgaacac atacaaatca gagcctgcca
     4501 ccggggccag tggcccgata tgttgtcttg ccgccgtttc cgttgattct tccggaatgg
     4561 gattaatcag gtcactgctg gcaatcatca caccgacagt ccccgttccc atccagtgtc
     4621 ggtatgtcca tgcgcgggta atgccaggca cttctttagc ccagacgaca tagtccccgt
     4681 cagccccgcc ctgcggcgtc cagtaatacc gctcaatgac gcgggcgcgc cacgtttcca
     4741 gctcttcagt atcaaatccg cctgtcaggg tgtcagccac accggaagac ggcagaccat
     4801 tcaccggcgt gaccaggatt aatgccgtac cgtcgtcagc gttaccgacc gcacctgcac
     4861 ttgagcaggc gatcggcacg cgcaggacac caccggagct gattgcatcg tcagttgtcg
     4921 tgtactgcac caggtcatcg cgctgaataa cactcccggc agtcaccttc aggccatcgc
     4981 tgacaccttc ccagcgcata tacccgctgg caaccgtggc ccccttgcgc ggacaccgtt
     5041 tcatcgcagc atgtcgcgcc agccaggact catcgcacag gtcaggcagc atattcattg
     5101 ccagataatc gatgtaaccg tagaccgtat gcagcgccgc cgcatacacc tttgcccgca
     5161 cgtcttcatc catgcgccgg agcgtgtcgc tgacgtccag cctggcgaat aaatcgttac
     5221 ggagcatact gatattttct gccagcgtcg ggcgctgaaa ttcactgtcc gccatgcgtt
     5281 atcgcactcc acagatcatc aaaagaaatc attactggtc catcacgacg cctgagggtg
     5341 atactgttac ccagctcatt aatcccggtg cggcggatat ccagatcaat acgggacacc
     5401 acgccgtcat cagtcatcca ttgcaggcat tcgcggatat atccccttac cgtctgcacc
     5461 agctgattgg tcagtttgct gcgctgaagc aaccacagtc gggagccgta acggtcattc
     5521 tgtaccgcag gccaggtatc cccccaccat cccatcggga cgtcggcatt gtcatcaggc
     5581 tccgcccgcc gccaggtgaa cagggaaatc accacggcgc gggtcagcgg atccagcggt
     5641 gcgctggcgc aggtgcgttt accgttcacc gtcagccaca gttccatcat gcctccatcg
     5701 ctttatcagg tttgtcggtg ttactgccct gaccgttctc tctgtgacga tgcccgttat
     5761 aggcaagccg catcgctgac atggtggtgc cgccggagtc gcacaggtct ttcacctgtc
     5821 cggtcacttc cagatccatt tcaaaacgtg cttcaggtgc attgcgaaac gtgatcgttt
     5881 tccctgcacc gtccaccacg atcccctccc gggtcagcgt cacagactgc ccctgatcgt
     5941 catagacagc cacctcaccc gtttgcagcc ctttcaggcg gtagcgccgg tccgacaccg
     6001 taacaaccac cgcatgagaa cggtcgccat ccggaaacaa caccaccgct tccgcaccgc
     6061 tgtttgccct tgcggtaaaa ccgtagggtt caagatgttc aaccccggct ttgggttcac
     6121 cggcaatcag ggacacatcc acggtctgac atttcgtggc ggcactgatg cttttcacca
     6181 ctgcccgccc aatcaggccg agaagttgtc gctgcatggc ttcaatcgtc ctcatcagaa
     6241 cgggtcctcc tgtactctgg cttttttctt tttccgcgcg ccgggggctt cgggttcagg
     6301 cagataagcg tcaggcgggc cgacacggat ttccgtcagg gtgccgttct ggtcctgagt
     6361 aaacgtgact tccgagacaa gcagttcggt attgtcgaaa ccacagaccg gatcgaagac
     6421 aatcacccgc tggttgggct gccacagcgt accgttaccc tgtcgccagc cctgcaccac
     6481 ataggtggtt tcatccgtcc gcgccgcccg ttttcgggct tcaaagtcag cacgcgcaat
     6541 acagcctgcc cccgtggcct gccctgtctg cctgatatac atcggacggt aacgggcaat
     6601 aaatgcgtcc tctgtgcggg cccgcagcgc ggtggtggtg gcctcaccga aatcatcgtc
     6661 gtttccggca cgctgccccg ccacctggta aacagaaaac cgctcccgga tactcttctc
     6721 cgtatcacag gaaaggatgt tttccccaag taccagcgcg gtatgtgccc gcgttgagcc
     6781 aataccgcca atcaccagcc tgccgtgcgg gtcgtcgtaa gccagcgcct gctgctgacc
     6841 gagtattttg ttgattacct caatcaccgt ttcaccgtga tcaggctgaa catcaggaat
     6901 aacacccgac ggcgcaccgc tgttcaccac ctcaatgccg aaaggcgcag caagcgcctg
     6961 cgcaatctgc accagcgagc gtccgttaaa ctgtgtcggt tcggctgcac agtcaatcag
     7021 gtcagccgtc agactacgtc cggcaatacc ggtgctgacc gaacgggcat cgtaacgaac
     7081 gggagtcgcc tccacccagc cggtgatcac cagctcatca ccaatcagca cttccacttt
     7141 tgaaccgttt ttaatgcgcg gctgaagcgt ggtgataccc tcatctcccg gccattggcg
     7201 agtgatctcc acactgaaat cccgcgccag ccgttcaata ccggcaccga tgcgcaccga
     7261 tgtccagcca ttccactccc ggccatttac ccgtagcgtg acattgtcgt tcattgcact
     7321 ggcaccttca gagggatcac cggcacaaag ccgggatgcg taatggcatt acgccgaata
     7381 atgtccgcgt cacgcgccgc gttatcaaac caggtcgccg ccagcaccag cgcgggtaaa
     7441 acctcatccg gcgtgcgctg aatgatccgt gcagactgtt caaggcgcgt gttgatatcc
     7501 gcattcagat ctgctttcac ccggcgcagc gccagaaaca gcgcatcact ggttgtacgg
     7561 gacaactcct tatcaattgc cgtattcagt gtgtcgcgaa tgtcggtcag ttcttcccac
     7621 gttggcaggt caaccgtgtt tttcaccgcc ggtgcattgt tcagtgccgg atgcgtgaca
     7681 gaaggccagc cggtgctctg cgcgggtgtt gttgactgcc ctactgtggc attctgcatc
     7741 accgcggaag ttgtgggcgc aggcaatcgt gtgacggcat acgccgcttc gctgattgcg
     7801 gtcgtacgaa gggtgctggc aaccacgtta cgctgctgcg tcgccgtggc ggtagtttta
     7861 ctgtccgttt tccagacgcc gcgcggttgc agatcgctgc cgaggctgac accggaaagc
     7921 gttttgatca tggtgaccag gtcgctggcg ttaccataaa ggcgtttccc ggtacgccac
     7981 attttctgca cctgctcaac gaaatttttg cctgacgatg gtggcggcag aagtaccgag
     8041 atatccccct gcaacagcct ggcggcatcc gatacggcag aatccaccac tttcatcgca
     8101 tcagaaacat acccaagcat tgtgctggca ttaccgacga cgtcgttctg cacaaaatct
     8161 gccacgccat cgatactgaa accactgaag ctgtcactga tgcagtcatc cagtgcagaa
     8221 caggatgaca tcagcgtctg cgccgtcgcc gcacctgaag tggggtaaga gagttctccc
     8281 gcttcgacaa acttcaggtc aaagcggaca atacgccctt cactcttcga tgtgctgacc
     8341 cgaacttccc cgtcaacaca gactttcagc tcaccgtaag tcggatggac aagcgtgccg
     8401 ggaccgggtt tattcagcgc gtcaatcagg cgatcgcgct ggtcaaagca gtcatctccc
     8461 accacataag ctgtgatgga cgggcggaaa gtgattttcc ccaggtcttc ggtatagggt
     8521 ttgtcgcggt tcgggtattc gtgcgtttcc acacgacgac cggttcccgc actttcttct
     8581 tcaaccttaa acggcacacc gcgaaatgac gcgtcctgaa gtctgtcttt ccacgtcata
     8641 taaactccgt acataaaaaa tcccaccgga gtgggactca ttaacagatt aatttttcat
     8701 tacctgccaa agcgcgtata gccaacatca tggctgacat caaaaccgct ggatcgcgtt
     8761 tccataaccc gcatacccgg aggcgaattc acaaaagaga ccttgatctc accatcaact
     8821 tttggcgcag aagctttgtt aatcatgaag ggattcgggc ctgtggcacc ggaggcgttg
     8881 tttgactgag ccggatctac cgcctgataa ggtgtgtatc cccgtgccgg tattcccgtc
     8941 ccataagcat cataagcacc cgcgccccac tgcgcagagt taatggcatc gaccgtgtca
     9001 ccggaactgt cggtaaacca ctcaataatt ggcttcagtt tgtcccacat atcctgaaac
     9061 cacttaacaa ccggtcccca gttattgatt accatcccca gcggcgacca ggcaaaaacc
     9121 ttcttcagaa gttcccagcc agcctcaaaa taaggaccaa tggtttccca gagcttcttg
     9181 aaataaggtc cgacaacatc ccagttagtg ataattaatc ccgcagccag ggctatcgcc
     9241 gtcgcaatca ttccaatcgg cgtcatcgac atgatcctgc tgacaatact gatggcaccg
     9301 ccaacgccca tcaatcccag tttcagaatc gcaagaccgg cagcaagccc gacgacgccg
     9361 cgaataaccc ggggattttc atccgcaaac ttcgtgaatt tttcccctaa ctcccccagc
     9421 cattgcgtga tatttttggc gtcaccagaa aatgcgccgc caatagccgc aaggccgtta
     9481 gttgcggtcc ccgtcattgc ctcccacagg ttggacagcg taccaagctg ggcctgaaca
     9541 cgtttattca ggctggcctg tttattcatc ttctgctgga tctgatcgta gccatccttt
     9601 cctttatcga ttagtgcatt gaccacctga agggtttcgg catcatcacc aaatattgcc
     9661 ttaagtacac ctgttcgctt aacgtcggtc agttttcgca gctttgccag ttgcctgaac
     9721 atgttatcaa gaccgccaaa acttcctttg ccgtcagtaa aatcgagctg taccccgagt
     9781 ttctggcggg ccatgatttt attgacgtcc ctgattttct taacgcttaa tccggactgg
     9841 ataacttttc gcagggcgtt acctgccgac tccccgttca tccccatctg atccatcatg
     9901 acgctgatgg gggcaaggct ctgtgcagcc tgaagaccgt ccttgttcac catcttcaga
     9961 acagagctgg ttttagtgaa gaaggacaac atgttggtat cgtcaacacc cagataaaac
    10021 gccttctgga tagtgtcgaa cagccccatc atgtcttctg acgccgttcc ggtagcatcc
    10081 tgcatctttg cagcaaactc agcagccgct tccggtgttt ttttcagttg taccgcaaga
    10141 taagctgtcg ctttacccac accgccaaga atgttttctg ccgggatccc ctgacgcacc
    10201 agcatctgca tcatgttctg gaaatcagcc gttgtaccgg gtagctggtt acccaggcca
    10261 atagccagtt tattgatgtc ctgaaagctc tttccgacct cgccgttcgc atccatcatg
    10321 gcgactttca gcccggtggc ggcgttttcc tgatcggcat aagatttcag ggaaagcgtc
    10381 agacccgctg ccagtccgcc accaagcgcc agcccaccct gtgacgcttc ttccgcctgg
    10441 cgtttaaatc cccggatttt cttttgcatt ttcgacagcg cgggagaaag cctgtcgaca
    10501 ccggtgatca acgccttaag ctcaaattcc gccatgtgtg cgtttctcct gctctatcct
    10561 gtttgcctga ctgaccagca aggtaatttc actgatcggc atattcagca attcgaaagg
    10621 attaatgcgc cagtaactgg cgcagtcaaa gaagcgatca gtgaggtatt cagccgtcag
    10681 gcctggagga aaaaaccagc cacaagccac gccgctgcat tcaggtctgc cggagacatc
    10741 tggtcgacag agctttgcgg cactttcgcc agccgcacaa tgtatttcga caccacatgc
    10801 gccagaagtc tgactgactc atcctgattc atctggtagg gataccccag ctcgcggaca
    10861 tccttcccgg tgggttcatc aaactccagt acggagagtg tctcgccatg agcagtaatc
    10921 ggtttcttta actcaagctc tttcattact ggtaatcccc ttcttcaccg tggaactcaa
    10981 gatcaaccgt gccttcttcg gcattatggt tcgcttcgcc gtgcagccag gcagacgaca
    11041 gtacatagac ctgaccgttc gccagctcgg cagtgatggt catctcatca gacgaggtga
    11101 ttttgcttac cggaaaattc ttcggcacct tgaaggtccc tttgacataa ggcgcacggt
    11161 gagtttcctt gcggtccact gaaccgtcca ggccgatgat gtcatcgtta accgttttgt
    11221 tcatgggcac ctcaatgccg ccggtcagcg atagctgctg accgtcaatt ttgaaataac
    11281 aggttccccc gatacgggcc attatgcaga ctcctctgaa tactgaagac ggaactgatt
    11341 aaccacggca aagacacgca gctggttaac atagtcaggc gggaacagcg tgttcaggcg
    11401 gttcggatcg ctggcatcac gctccacaac caggtactgc ttaaacagtt cgtagttttc
    11461 cacgatcccc gcacgctcaa gctgacggta ggttgccagc agttcccctt tgatcaccgc
    11521 cggggtgaca atcgcctgac cgggaccaaa gcgggtaccg tcactggcaa gcttgtgacg
    11581 cccgtactta ctggtaatga cggatttcag tttgcgcagt acatacgcgc tggtatgcag
    11641 cgtctcactg tcgaggtaac tgttatccgc aaccccgtaa gcgtttttcc tgtacgtggt
    11701 gacatcacgc tgaatgcgta gtaccccgct ttcgacatac gccgttgcca cgccatgaga
    11761 cagcagggtc tgttgttcgg tcatcgtgaa ccgtttcccc ttcggcgcag gcagcatacc
    11821 caccagctca ccggtctgcg tgggacgtgc cggatcgttg cggataaaca ccgctgcgcg
    11881 ggcggtacgg cttgccgcca gctcgtcggc aggcgtctgg gtctcttttt cgtaccccgc
    11941 cagggtaatg tgctgctggt taaactggtc acctgcggtc accagttctg acagcgtgcc
    12001 gatctttgcc gtatacacat gaccatacag ctgacgcgca tagctccagc gaccgctggt
    12061 atcgttcatc tcggtcacca gcgtgttaac ggaggccgtg tcgttgaacg gcaggccgat
    12121 ataatcaaac ggctcatccg ccattgcagc caccgcgccg gtgagaaccg gagcacccgt
    12181 tccggcggta cccgtcgcca cggcaatctg tacgcccgct ggcagcactt cgcccccacc
    12241 aaagccgtag taattgaggc tgacaggaat ttcattccca caaagcccct tatgacgcgc
    12301 ggtcagtgtg accacgcctg ccgaagatga agccgtaaac ggcagggtcg gaacggcatt
    12361 gatggcatcc tagatactgc tggcaatcat cgtgacgtta tcgccgttag tcaccggtgc
    12421 ctgcacgcgg gtacgtccta catacacatt caccgtgccg gtttcggttg ccgccccggt
    12481 caccgtcagc gtaactgttg ccgccgcacc tgtggattca ggaacggcaa tcacatacag
    12541 ctcgccaaac gggtcagtct ggcgataagc ctcgaccata cgcgccagct gacttcccgc
    12601 accacaaatc tggcgtgcat agtctgccga cgacatcagt accagactgt tggcaacaat
    12661 ctctgcaccg ttattggcat gaccaatcag cagcgatgct ccgctgtcct gtgcagtatt
    12721 cgccgcctgg ttatccattt ccgcataaaa caacggaacc agcgtattcg acggaatggt
    12781 gttaaagctt atcgtcatcg gtgttcacct ttttattcac gcgccggata tcacccgctg
    12841 cttcacggcg cagccagtag ttgttctcgt caacatttcg cccttcggcg ggcaaaaggt
    12901 cgccgcgggc agggtcaggc actgaccgcc ctttaacagg tttgacaaac atgaggatcc
    12961 tcaggaagga agggttattt aggtgtgatg ttcgatatcg ccgtcaggcc cgttaccggg
    13021 ctcgagataa tcaacatcaa tcgccagcgt ttgcagttca tccagactgt tcagatcatc
    13081 ctgctggcgg gtatcgtctt cagtcagctc gctgatgacc gaaaaatcga actgataaat
    13141 cagctcatga cgattcagat ccagcagcgt gccgccgtca taggtaatcg ggttaccgca
    13201 cgcctccggg ttccagccca gcagagcctt aaagagcatc tgccggacat cgtccaccac
    13261 atcatacgag gcaaactgac cacgctcatc acgcccatta ctcagtatga caaccacgga
    13321 gaaaccctct ttcagctcct gccagtagtc ggtctggctt ttgttttctc ccggagaatc
    13381 atcacccggt acaacatatg ccgccgggag tttcagcttt ccgacctccg gcagattttt
    13441 gaactgggcc gcgcctgcaa cccggttttc aaaatacgga caacgggcac gcagtgcagc
    13501 aataacagga gtcagtttca tctgtgtcgt cgctccggct tcagtgattt acgcaattcc
    13561 cgcgccagaa aatagcgtgt ccagctgcgg ttcttttcaa gcgtttccac catgaagtta
    13621 ttacgtggag ccagtcgcca gccgctgcca ccggatgcac cacgatgatg actacgacga
    13681 cgttttgctc ctccccggac accaaaaaac agaaacgccg gatagaagtc accagagatc
    13741 atccggttcc ccttcccgtt gcgctggtta ggggcaatgc gtgtcataaa accggctcgc
    13801 tttttactgg ctctcggcac catataacca atcgaacgag ccaggcgtcc ggtctgataa
    13861 ccggggtttt cacccggtgc cgaccgcgca cggcgcatca ccagccgacg ggcatcacgc
    13921 atatgacgct gcccaatcgt gacaaacgcc cgccggacac gagcgcggtt aaagcgcatc
    13981 tcggcgggct gctgaacatc aacgtgaaaa aagggagtcg ccattgctgc ctccgtgact
    14041 ctgcctacat tcgcccagct ccgtacactc cagcagcaga aagcgccgcg ccccgttcag
    14101 atcacgctga cgtttcaccc ggtacacact gtcatcacag accacctcat aatcagcagt
    14161 gatcccccgg cggtaacgaa tggtgatgta atgggtgatg gcgtccccgg tctgcgcggt
    14221 ttcctgccag gtggtggcac tggtctggat aaccttcgcc catgtccgga acgtaaccgg
    14281 gtattgaggc tccacgccaa agttatccgc gggcatatcc acccgctggc ggatcaggac
    14341 gcgtttattc agttcaccgg ggtccggcag aatgtaggtt gcgctggtct gcgcctgacg
    14401 aattttcatt gcggaaagta cctgtacggg ccgacaagcc agccaaaact ctgcggcatg
    14461 tcgagtttct ccacttccgt aaccgacgag cggttttcgt aaaaatggct gataagcatc
    14521 agcatcccca gacgaatatc atccggcagg tgcagcccgt ccggatcgct gtccggaatg
    14581 gtttcatccg gtgcatagag cttccggttc agatacgttt ccgtccgctt ttgtgccgca
    14641 caggccagca gttgcagatg gcggtcatca gcatcgaaat cctcatccag ccggagttgg
    14701 gctttaatct cttccattgt cagaagcata ctcagccctc tttactggtc gtggcttttt
    14761 tctcttttgt cgctttactg ctttttgcac tggttccgcg ctctgctaac ccggcctgaa
    14821 gtgcaatctc ctgcacccgg gcaggaagcg ccccgtcgtc atactcaccg gcccgaatga
    14881 cctcaacacg cataccgtcc ggtgaccatt tcagatcttg tttcaggatc atgattcttc
    14941 acccgtcaga acaggggcgc ggttccgcgc ccctgagtga ttacgccact gcaatcttca
    15001 gcagtttgat ggcctgcgaa tcgaccagca tgccgccggt gcgtttggtg gtataaaaac
    15061 cgacaaacgg tttattggtg tacgggtcac gcagaatgcg ggtgccgata cggtcaacga
    15121 tggtgtaacc ccgtttgaag ttaccaaatg caatggcttt cgcatcagcg gcgatatccg
    15181 gcatctgttc gttttcagcg ataccgtaac ccgccagaga ggacggctgc cccagctcca
    15241 gccccggacg ccacagatag ttaccctcgc tgtctttcag cagacggatg gcaaacaggc
    15301 tattgttgtt catcatgaac ttcgcgccgg tgcggtgtgc cttacgcagc gtgtaaatca
    15361 gtttgataat ggcgtctgcg gtcaccgccg tcgcgtcgcc ggatacaata tgctgaagtt
    15421 tgccgaacgc ccggacctta tcggtttcat ccgtggattc attcgccagg aaccctttcg
    15481 gcttcttggt accatcgccg gtggtaaagg caatttcttc ctgttcggca aattcggttg
    15541 ccagctcgct gttgatccat gcttccacgt tgaaaaaggc atcatccagc attttctggg
    15601 tggcctgcgg g
//
LOCUS       DADKRT010000099        15365 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.100, whole genome shotgun sequence.
ACCESSION   DADKRT010000099 DADKRT010000000
VERSION     DADKRT010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15365
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.100"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(73..516)
                     /locus_tag="JQ356_002581"
     CDS             complement(73..516)
                     /locus_tag="JQ356_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY4622629.1"
                     /translation="MAELQKVDDWLSALLANLEPAARSRMMRQLAQELRRTQQQNIRM
                     QRNPDGSSYEPRRVTARSKKGCIKRQMFTKLRTTKYLKTAASADSASVQFEGRVQRIA
                     RIHHYGLSDRVSRKGIYTIYAKRQLLGFNVQSIELIERMFIKNLT"
     gene            complement(509..940)
                     /locus_tag="JQ356_002582"
     CDS             complement(509..940)
                     /locus_tag="JQ356_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622630.1"
                     /translation="MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVASGASSMSW
                     EYRYTLNVVIEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVC
                     DISLNLQLTERVLVSTDGSVSNVEAVAEPDEPEEMWTVKRG"
     gene            complement(1036..1464)
                     /locus_tag="JQ356_002583"
     CDS             complement(1036..1464)
                     /locus_tag="JQ356_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HAY4622631.1"
                     /translation="MNRLLLVVLALLLAALGWQTWRLADASQTISTQADELQSKSQAL
                     AKSNSQLISLSILTETNNREQARLYAEAEQTSVLLRQRQRRIEELKRENEDLRRWADT
                     PLPADIIRLRERPALTGGAAYRQWLSASDAVSAGAGSAAH"
     gene            complement(1461..1838)
                     /locus_tag="JQ356_002584"
     CDS             complement(1461..1838)
                     /locus_tag="JQ356_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000730949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622632.1"
                     /translation="MKKKLISGLFLMLWMALLIAAMVYPQGIFPVLAASGVWVACLLT
                     WAVIPVALASLIKNGPLWQELRASLLKTITRKENVFISWVIRLLIVVSLAWTGWAITL
                     VFYLLTVIAFWITHNQMAQQVAA"
     gene            complement(1840..2352)
                     /locus_tag="JQ356_002585"
     CDS             complement(1840..2352)
                     /locus_tag="JQ356_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY4622633.1"
                     /translation="MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCR
                     LQPYQCSAGVWTDGIGNTSGVIPGKTITERQAAEGLISNVLRVERALEKCVKQQPPQK
                     VYDAAVSFAFNVGTGNACSSTLVKLLNQRRWADACRQLPRWVYVKGVFNQGLDNRRAR
                     EMAWCLQGAN"
     gene            complement(2333..2548)
                     /locus_tag="JQ356_002586"
     CDS             complement(2333..2548)
                     /locus_tag="JQ356_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622634.1"
                     /translation="MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAI
                     NWYYKHKAYQLLRDGQISREDYESINR"
     gene            complement(2552..2755)
                     /locus_tag="JQ356_002587"
     CDS             complement(2552..2755)
                     /locus_tag="JQ356_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4622635.1"
                     /translation="MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLP
                     HGLQVELPDIPTTTTVQTVQLWD"
     gene            complement(2755..3219)
                     /locus_tag="JQ356_002588"
     CDS             complement(2755..3219)
                     /locus_tag="JQ356_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HAY4622636.1"
                     /translation="MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPR
                     LKQVALSAISEVNAELYEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYCWAR
                     AMLNERFQDYDATASGAKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI"
     gene            complement(3315..3965)
                     /locus_tag="JQ356_002589"
     CDS             complement(3315..3965)
                     /locus_tag="JQ356_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HAY4622637.1"
                     /translation="MSLSPARQHRLRVQAEQAVREGGSVRHASGYDLMLLQLAEDRRR
                     LKGVQSTVKKAEIKVELLPKYAAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALE
                     IGRHALRHGWVMPLGNRNVQTVLTEEMADAAQSAMLAATGFDADLLLQTLELTDGLDM
                     PDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR"
     gene            complement(3969..5027)
                     /locus_tag="JQ356_002590"
     CDS             complement(3969..5027)
                     /locus_tag="JQ356_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HAY4622638.1"
                     /translation="MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQ
                     IQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKC
                     EQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
                     PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNE
                     LIDVVYQDDDDLVVICGRELLSDKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRA
                     PFFPPNALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAAL
                     VENIQISDFSAAAAETGA"
     gene            complement(5044..5877)
                     /locus_tag="JQ356_002591"
     CDS             complement(5044..5877)
                     /locus_tag="JQ356_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HAY4622639.1"
                     /translation="MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALIN
                     LEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKL
                     FTFMEVSLKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFT
                     AAEETVIELEEVQDDKPSLFARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSAR
                     TEKSLSEQEERLSELETALQAQQTAFNELVDKLSHEDSRQDYRQRATGGNAPADTLTN
                     C"
     gene            6020..7786
                     /locus_tag="JQ356_002592"
     CDS             6020..7786
                     /locus_tag="JQ356_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HAY4622640.1"
                     /translation="MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWK
                     KRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNG
                     GNEADLNPNVANRNKGPRRQPEKNVFTDDQIEKLEKIFHSSMFNYQRHWWEAGKTNRI
                     RNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVEL
                     KGDPMVLPNGATLYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWR
                     QTYFSTPSSLTHSAYPFWSGALFNRGRNKADKVDIDLSHSNLAPGRLCADGQYRQIVT
                     VEDAVRGACNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVW
                     TDFHALALRPFGWREVWIGYDPAKGTQNGDSAGCVVVAPPAVPGGKFRILERHQWRGM
                     DFRAQADAIKKLTEQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVL
                     KAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATM
                     HALFNEPLQGESANTSNIVEIF"
     gene            7786..8817
                     /locus_tag="JQ356_002593"
                     /pseudo
     CDS             7786..8817
                     /locus_tag="JQ356_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000520363.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            complement(8924..9805)
                     /locus_tag="JQ356_002594"
     CDS             complement(8924..9805)
                     /locus_tag="JQ356_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004982020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622641.1"
                     /translation="MKWAIEMNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFIL
                     NAYRSYIKNKGYLNVNSCGVLSNNIAEALRYYYNNPAKCLSIIDDIRAANSNSLCPMC
                     GSMHSGTLDHVLPKENYPEFSLFTKNLVPACKCNTFKSTTIANSAGHRMLHPYFDNIL
                     KQRLICANFSKLGRTPTIDVKIIIDPMSPEYNNVKYHLDNVVIKNNIKGYLSEQWESF
                     YLYPELVIRGLNKSLSTYSDVYELLTRELLLLDEKHKGKNNWNSVFVAGLIRPDVIRW
                     ILCELHLGNRSPDGRLI"
     gene            complement(9789..11438)
                     /locus_tag="JQ356_002595"
     CDS             complement(9789..11438)
                     /locus_tag="JQ356_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000960487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY4622642.1"
                     /translation="MLVKKNKNYSLYFLITNNQQISDSGNYIKIVPSRSDWNDFGYLS
                     RVEISIFNKKECKDIISLNGYIGFLNSEEERNGKAELIRRVKKKEESNLKDEGFNDYF
                     VMLQDMNNYRRLVRFFGVNESKYILNFINDVVSKKSDASAENLRKKAISSDIFNKSFI
                     RESESYFTFKNAGTVLSGIQYEELGNLSQHIKISYSNKVNEEDVSYVFNFDHEHDLPK
                     RISIIIGENGVGKSQTLREIALAAIKGKDNLVAVVDSNGVSIEERIQISRLIAFSPTN
                     ESKCSFPTDKRIKSLIWYKRLTLNRESKSKLNLNDLIVQLARSNDAIGYNQRWNIFVD
                     ALSVLNSNNDLVIKCGGENSPFVKLNELNSRGEESRLSLYSEIILSGEPLRLIENKCY
                     PLSSGEISFIKFCVQVCLYIENGTLLLIDEPETHLHPSFINKFMALLDNLLEKTGSSA
                     IIATHSVYLVREVFKEQVTILRRRDDGVIVSEKPRLSTFGANIGNISYFVFGESEPTQ
                     ILNKVKNNIIAKNMSWDDVESKYSEDLSLNVLTALRNEMGN"
     gene            complement(11731..11964)
                     /locus_tag="JQ356_002596"
     CDS             complement(11731..11964)
                     /locus_tag="JQ356_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY4622643.1"
                     /translation="MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGS
                     SNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH"
     gene            complement(11975..12163)
                     /locus_tag="JQ356_002597"
     CDS             complement(11975..12163)
                     /locus_tag="JQ356_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622644.1"
                     /translation="MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDE
                     LMAKIRTHEYNRSMDVIS"
     gene            complement(12317..14731)
                     /locus_tag="JQ356_002598"
                     /pseudo
     CDS             complement(12317..14731)
                     /locus_tag="JQ356_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000017528.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
     gene            complement(14728..>15365)
                     /locus_tag="JQ356_002599"
     CDS             complement(14728..>15365)
                     /locus_tag="JQ356_002599"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HAY4622645.1"
                     /translation="RVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYR
                     GLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQRATFICASFDETLAMLKAGDVV
                     YCDPPYDGTFSGYHTDGFTEDDQYHLASVLEHRSSEGHPVIVSNSDTSLIRSLYRNFT
                     HHYIKVKRSIGVAAGEGKSATEIIAVSGPRCWVGFDYSRGVDSSAVYGVRA"
BASE COUNT         3765 a         4153 c         3525 g         3922 t
ORIGIN      
        1 accttaaaat caccatcata cactaaatca gtaagttggc agcattacca ctcaattgaa
       61 aacaaataaa aatcaagtta ggtttttaat gaacattctt tcaattaact caatagattg
      121 gacattaaaa cctaataact gccttttcgc atagatggta taaatacctt ttcgactgac
      181 gcgatcactc aagccgtaat ggtgaatacg ggcaatgcgc tgcaccctac cttcaaactg
      241 tacgctggca gaatcggcgc tggctgcagt tttcaggtat tttgtggtgc gcagctttgt
      301 aaacatctga cgtttgatgc accccttttt gctgcgtgct gttaccctgc gcggctcata
      361 actgctgcca tcaggattgc gctgcatcct gatgttctgc tgctgtgtcc ggcgcagttc
      421 ctgcgccagc tggcgcatca tgcggcttct tgcggctggc tccagattcg ccaataatgc
      481 actcagccag tcgtccacct tctgcaattc agccacgttt caccgtccac atttcttcag
      541 gttcatcagg ttccgctacc gcttcaacgt tcgacacact gccgtcagtg ctgaccagca
      601 cacgctccgt cagttgcagg ttaaggctga tatcacagac atcgttgcgc agaatatcca
      661 cctcaaaggt gaatagcttt tcccgtaacg ccgggttatt gatcgcatca ggctggttat
      721 cccgcagcca cagcaaaacc ggggccatca gcagattctg gtcgccgctg aaatcttcaa
      781 tcaccacgtt cagggtgtag cggtactccc atgacatgga gctagccccg gaggcaacca
      841 gcgaaccgtt atccacaaac agatgcagtt tgtccgggtt attacggaca taaggcactg
      901 ctttattgag ggcgtggcgc agggattgtg gtttgttcac tgtttcgctc ctgacacgca
      961 ataatcatgt ccactttgtc tgcacagacc gcccaggcgg cctccgtttc atccagcaac
     1021 gcattcaaat caccgttagt gcgcggcgct gcctgctcca gccgacacgg cgtcactcgc
     1081 ggacaaccac tgacggtaag ctgcacctcc ggtgagtgcc ggacgttccc gcagccggat
     1141 aatgtcagca ggcaaaggag tatcagccca gcgacgtaaa tcctcgttct cacgtttcag
     1201 ttcctcaatc cggcgttgtc gttgtctcag cagtacactg gtctgttctg cttcggcata
     1261 gagccgcgcc tgctcccggt tattggtttc agtcagaatg gacaggctga taagctggct
     1321 gttgctcttt gccagtgcct ggcttttgct ctgcagctcg tctgcctgcg tgctgatggt
     1381 ctggctggca tcagccagcc gccacgtctg ccagcccagc gccgccaata ataacgccag
     1441 cacaaccagc agcaaccggt tcatgcggct acctgttgcg ccatctgatt atgggtgatc
     1501 cagaaggcaa taacggtcag cagataaaag accagggtaa tggcccaccc cgtccaggcg
     1561 agactgacga caatcagcaa tcgtatcacc cagctgataa atacgttttc ttttcgggta
     1621 attgtcttca gtaaagatgc cctcaactcc tgccagagcg ggccattctt aattaacgaa
     1681 gccagtgcta ccggaattac cgcccatgtc agtaaacagg ctacccaaac gccggacgct
     1741 gccagtaccg gaaaaatccc ctgcggatac accattgctg cgattaacag cgccatccat
     1801 aacatcagaa acagcccgct gattaatttc tttttcattt cagtttgctc cctgtaaaca
     1861 ccaggccatc tcccgcgcac ggcggttatc cagcccctga ttaaaaacac ctttcacata
     1921 aacccagcgc ggcaactgtc ggcacgcatc cgcccagcgc cgctgattga gcaatttcac
     1981 cagcgtggaa ctgcaggcat tgcccgtacc cacgttgaag gcaaacgaca ccgcagcgtc
     2041 atacaccttc tgcggcggct gttgcttcac acacttttcc agcgcccgct ccacacgcag
     2101 cacgttggag atcagccctt ctgctgcctg tcgctccgta atggttttgc cgggaatgac
     2161 gcccgacgta ttaccaatac cgtcggtcca gacacccgcg ctgcactgat acggctgcag
     2221 acgacaacct tcgtaatcgg caatcagttt cagtccctcc acggaggtgt gaagctgctg
     2281 aaaacccggc agcgtggcag caatagccag cacggccccg acaaggcagc gtttaacgat
     2341 tgatggattc atagtcctcc cgcgagatct gcccgtcgcg cagaagctgg taggctttgt
     2401 gtttgtagta ccagttgata gccagcatca gcacaccaat catcaggccg cccagcgttg
     2461 aggcatcctt gatggacaaa tcgcccagcc aggccagcac gacggcgatg caatacgtga
     2521 taaaggcgct gattcgctca agcgtcataa ttcagtccca tagctggacg gtctgcacgg
     2581 tggtggtggt cggaatgtcc ggcagctcca cctgcagccc gtgaggtaaa aaggggccgt
     2641 attcggcaag ccccggattt gccttcagta cctgctccgt gacaccctgc gtgcgcccgt
     2701 aatgacgcca gcaaagcgcg tccaccgtgt catactgatg cgcacgcact ttcatcagat
     2761 aagctccact gtgcagtgcg gcgcgtcctg cacccggctg atggcccagc gggcgtcacg
     2821 ccacaaatca ccgcttgctt ccgccagttc ttcgccccgc ttcgcaccgg atgccgtggc
     2881 gtcatagtcc tggaaacgtt cgttgagcat ggcgcgagcc cagcagtaaa ccgcgttgaa
     2941 atagtgctga atgcgctcac ttttcccgtc cagctgttcc gccggaacct cagccagcga
     3001 cgcatacccc agcatctgct ggcgtctgcg aaactcatac agctctgcgt taacctccga
     3061 aattgccgac agtgcaacct gctttaaacg cggctgcgtc accgtgccgt cagtgcgcat
     3121 gacactgcga aactccgaca ggtccacatc aggccagaac ggcgtatttc taatgatttc
     3181 cgcctgttcc ggtgcctgtt ctggcgcaac aaacttcatg ctgctttctc ctgaaataaa
     3241 gggcggtgga cggggttttg atgtggctgt gcctttcgcc accccgtgcc gcccgtgcgc
     3301 gggggcacgt tctgtcagcg gctgtcattg cgcagtctgc gctccagctg ctgtttgtct
     3361 tttttcacgc cacagcgggg atcgagctgt aacgcatggt tgagatgatt aagggcggaa
     3421 gccggattgc tttcactcag gaccgcgcca atcgctttat gcagacgtgc ccgtgactgg
     3481 tccggcatat ccagaccgtc tgtcagctcc agcgtctgca gcaacagatc ggcatcaaag
     3541 ccggtggcgg caagcattgc gctctgcgct gcatctgcca tttcctctgt cagcacggtc
     3601 tgcacgttgc ggttgcccag cggcatcacc catccatgac gcagggcatg acgcccgatc
     3661 tccagcgccc cggcataatc tccggcatca atgcgccaca acatcacgta catcagcacg
     3721 tcatcctgtt gagcgcctcc ggcagccagg acaccctccg cccaggcggc gtacttcggc
     3781 agcagctcca ctttgatttc cgcttttttg accgtggact gaacgccctt gagacggcgg
     3841 cggtcttccg ccagttgcag cagcatcagg tcatagcccg atgcgtggcg aacactgcca
     3901 ccctcacgga cggcctgttc agcctgaacg cgcaggcgat gctgccgtgc gggactcagg
     3961 ctcatggatt acgctccggt ttcggctgcg gcggcgctga aatcactaat ctggatgttt
     4021 tccaccagtg cggcgcagcg gtagtcctca accacatagg cttcgttaac ggattcaaag
     4081 ttttcaatcc ggtcacgttt cgggttgtcg ataactgaac ggcggcgggt gtcttcctgc
     4141 cagtagatgg acaggttatc cagacgggtg atcagcagcg cattcggcgg gaagaacggc
     4201 gcacgcacgg cctgcaggcc acccatgcgt ttctgactga tgatcatatc ggcagccagt
     4261 ttttcactgt tttcctgctc tttgttgacc agcgggaaat acttgtcaga cagcagttca
     4321 cgaccgcaaa tcaccaccag atcgtcatcg tcctggtaga ccacgtcgat aagctcattg
     4381 acggcatcca tcaccacggc gtccaggttg gcatattcgc cacctttccc gactttcact
     4441 gcgcccggtg tggtttcacc gcccgtggtg gtgctgccca tgacgtgatc cggtgcatcc
     4501 tcacggattt tctgcagcca gcctttattc acatcctgca gcagcgggtt ttcgctacgg
     4561 ttggaggttt tcgcacgctt cacgccatta aagccgatca tgatgcggtc cagtgcctga
     4621 cgtttcacga tggcgtcacg gatacgcacc tgaaaatcct gaaacttcgc ccacaggtcc
     4681 agcttcgcgt aggtcagcac cgtgtcaaag ttggtctgct cgcatttata ttccacatcg
     4741 accatcagcg tcggatcgac aggttcacgc tctttcgcag tggtatcagt ggttccggca
     4801 atggtgctgc caactcccaa ccccagcagc tgaccggact gctcagtcac tggcgtgacg
     4861 ttaatcagag tcaggaaagc ggcggactgc tggatctggt cttccagcgt ctgctgcacg
     4921 gacggctcta cggtgaactt gctggacagt tcttcaactg ccacaccgtt cagacgcgcc
     4981 agttgctgca ggtaagcgtt aaaagcaaag cgggtattct tcttcatcag gttttgtgct
     5041 ccatcagcaa ttggtcagag tgtcagcggg ggcgttaccg cctgttgcac gctggcggta
     5101 gtcctggcgg ctgtcttcat gactcagctt gtccaccagt tcgttaaagg cggtttgctg
     5161 tgcctgcagg gcagtctcca gctcagacag gcgttcttcc tgctcagaca gggatttttc
     5221 ggtgcgtgcg ctcaggttct gctgctcagt ggcgaccagc tccacggcct tatgcacatc
     5281 agagaaccgg gcgtcatcgg actgctcttt tttggtaaac agcgccgtga cgcgggcaaa
     5341 cagggacggt ttgtcgtcct ggacttcttc cagttcgatc accgtttcct ctgcggcggt
     5401 aaagagattg gcgggattct gcttgcggtt tgccagcggg ttatgggctg cactggcgct
     5461 gaatgtcagc atttcagtgc ccagactggc agggtcatca gtggcagcca ggccgactag
     5521 gtaggctttg cccgtatcag cgaacttcag gctgacttcc ataaaggtga ataatttctg
     5581 gccttttttc accagttcca ccagggactc cgttggctca acgtcagcat acagcgccat
     5641 cttgcctgcc agcggacctt ccgtgatttc ttcagcaaac agcgccgtca ccttgccgta
     5701 gcggttaaag gtgctgtccg gcagataaga cttgatgtgc tcaaggttaa tcagcgcggt
     5761 atacaccgcc gggttatagc tggctgccat ctgttccagc cattcacgct ggatttcgcg
     5821 tccgtcggtg gtggcacctt ccaccccgat gcgaaaacgc tttgctttca ctgtcatgag
     5881 ccgtgctccg ttagaaaaaa cttactggag ccttatggtt gcggtgatag gggcagtgaa
     5941 acaatgcgcg gtatttgtac cgacaaccac acaaaccgca ggcggggaaa gccttcattc
     6001 aaggctgtag gtttgtgcca tgaacaccac actgacaccc gcagatctcg atccccgtcg
     6061 gcaggccatg ctgctgtact ttcagggata ccgcgtagcc cgcattgctg aaatgctggg
     6121 cgagaaagtt gcaaccgttc acagctggaa aaaacgcgac aagtggggtg actatgggcc
     6181 tctggatcag atgcagctca ccaccgccgc acgctactgc cagctcatca tgaaggagca
     6241 caaagaaggg aaagatttca aagagattga cctgctggcg cgccagtctg agcgccacgc
     6301 gcggatcggc aagtttaaca atggcggcaa cgaagccgac ttaaacccta acgtcgccaa
     6361 ccgcaacaaa ggcccacgcc gtcagcctga aaagaatgtt ttcaccgatg accagattga
     6421 gaagctggaa aaaattttcc attcctccat gttcaactac cagcgccact ggtgggaagc
     6481 cggaaaaacc aaccgcatcc gcaacctgct gaagtcacgc cagatcggcg cgaccttcta
     6541 ttttgcccgt gaagccctga ttgacgccct gcttaccgga cgtaaccaga ttttcctttc
     6601 tgccagtaag gcacaggccc acgtcttcaa acagtacatc atcgactttg ccaaagaagt
     6661 ggaggtggag ctgaaaggcg atccgatggt gcttcccaac ggggccacac tgtatttcct
     6721 cggcaccaat gcccgcactg cccagagtta tcacggtaac ctgtatctgg atgaatattt
     6781 ctggataccg aaatttcagg agctacgcaa agtggcttcc ggtatggcta ttcacaagaa
     6841 atggcggcag acctattttt ccacaccatc cagtctgacc cacagtgctt atccgttctg
     6901 gtccggtgcg ctgttcaacc gtgggcgcaa caaagctgac aaggtggaca tcgacctgtc
     6961 ccacagcaat ctggcccccg gccggctgtg cgcagacggg caataccgcc agatagtcac
     7021 cgtggaagat gcggtgcgcg gcgcctgtaa cctgttcgac cttgaccagt tgcgcatgga
     7081 gtacagccct gacgaatacc agaacctgct gatgtgcgag ttcgtggacg atctcgcgtc
     7141 cgtgttcccg ctcagcgaat tgcaggcgtg catggtggac agctgggaag tctggaccga
     7201 ctttcatgca ctggccctgc gcccgtttgg ctggcgcgaa gtgtggatcg gttatgaccc
     7261 ggcaaaaggt acgcagaacg gcgacagcgc cggatgcgtg gtggtggcac cgccagccgt
     7321 gccaggcggt aagttccgca ttcttgagcg tcaccagtgg cgcggaatgg actttcgcgc
     7381 ccaggctgac gccatcaaaa aactgactga acagtacaac gtgacctata tcggcatcga
     7441 ctcaaccggc gttggtcacg gggtttacga gaacgtgaaa gcgttttttc ctgccgtccg
     7501 ggagtttgtc tacaacccca acgttaaaaa cgccctggta ctcaaggcct acgacattat
     7561 cagccaccgc cgtcttgagt ttgacgccgg gcacaccgac attgcgcagt cattcatggc
     7621 aatccgtcgc gccaccaccg ccagcggcaa ccgcccgacc tatgaagcca gccgcagcga
     7681 agaagccagc catgccgatc tggcctgggc aacaatgcac gcactgttta acgaaccgct
     7741 gcagggcgag tccgccaata ccagcaatat tgtggagatt ttttgatggg aaagagtaag
     7801 aagaaccgcg ctgcggcgac gaaacagacc cagcataaaa accagacttc agccgaagca
     7861 ttcagcttcg gcgatcccgt tccggttctg gaccgccgtg aactactgga ctatgtggaa
     7921 tgcgtacaga cagatcgctg gtatgagccg ccagtgagtt ttgacggact ggcgcgcacc
     7981 ttccgcgccg ccgtgcatca cagttcacca attgcggtga aatgcaacat tctgatcagt
     8041 acctacatcc ctcacccgct gctcagccag caggcttttt cacgttttgt gcaggattat
     8101 ctggtatttg gtaacgctta cctggagaaa cgcacaaacc ggttcggaga ggtcatcgct
     8161 cttgagcctg ctctggcaaa atacacccga cgcggattag acctagatac ctactggttt
     8221 gtgcaatacg gcatgaccac gcagccgtat cagttcacga aaggaagcat ctttcatctg
     8281 atggaaccgg acatcaacca agagatctac ggcctgccag gttacctttc tgccattccg
     8341 tcagccctgc tcaacgagtc cgccacgctg ttccgccgat agtattacat taacggcagt
     8401 catgcaggct tcatcatgta catgaccgat gccgcgcaaa accaggagga tgtgaacaac
     8461 ctccgcaatg cgatgaaaag cgccaaagga ccaggtaact tccgcaatct gtttatgtac
     8521 tcgcctaacg gcaaaaagga cgggcttcag atcatcccgt tgtcagaagt cgcggcgaag
     8581 gatgagtttc tgaacatcaa gaacgtgagc cgggatgaca tgatggcggc gcatcgtgtg
     8641 ccaccgcaaa tgatggggat tatgcctaat aatgtcgggg ggtttgggga tgtggagaag
     8701 gcgagcctgg agtttgtacg taacgagtta ataccgttac aaaaaagaat gatggaaata
     8761 aataaattgg taagtgagaa cattgttaaa tttgatagtt ataaactagc tacttaacgt
     8821 aatcactaaa tgaggttctt taacacagct aaaaaattta ttaatagcca gcagttttta
     8881 tgaatttctt cagcgtgcag atacacgctg aagatgcaaa aaatcatatg agacgaccgt
     8941 ctggacttct gttacctaaa tgtaattcac agagtatcca cctaatcaca tcaggtcgaa
     9001 ttaacccagc tacaaaaacc gaattccaat tatttttacc tttatgtttt tcatccaaca
     9061 gcaacaactc gcgagtcaac aactcatata catcgctata agtagaaaga ctcttattca
     9121 gtcctctaat aacaagctca ggatataagt aaaacgactc ccattgttca gacaaatacc
     9181 ccttaatatt attcttgata acaacattat caagatgata cttaacattg ttatattctg
     9241 gtgacattgg gtcaattatg atttttacat caattgtagg tgttcgccct aatttagaaa
     9301 aattagcaca tattaatctt tgttttaata tattatcaaa atatggatgc agcatccgat
     9361 ggcctgcaga attagctata gtagtacttt tgaaagtatt acatttgcaa gcaggaacca
     9421 aattcttagt gaataaagaa aattctggat agttttcctt gggtaaaaca tgatccaaag
     9481 tcccgctatg cattgaacca cacattggac atagagagtt agaattagct gctcttatat
     9541 catcaattat agataaacac tttgcgggat tgttataata atatctcaaa gcttcagcaa
     9601 tattgttact caatacgcca caagaattga cattaagata ccctttattc tttatgtacg
     9661 atctatatgc attaagtata aatgtatcct gtccattcag aacagaatga tgttttaatc
     9721 tcttatttgc agatagtttt ttaaatgcag aataatcttt aaaaacaggt ctttttaatt
     9781 tattcatttc aattgcccat ttcatttctc aacgcagtta atacattaag tgataagtcc
     9841 tcgctatatt tagattcaac atcatcccaa gacatattct ttgcaattat attgtttttt
     9901 actttattta aaatttgagt tggttcactc tcaccgaaaa caaaatatga gatatttcct
     9961 atattcgccc caaaagtact caatctcggt ttttcgctaa caattacccc atcatctcgt
    10021 cttctgagta ttgtcacttg ctccttaaaa acctcccgaa caagataaac cgaatgcgtt
    10081 gctatgatag ctgaagagcc tgtcttttct aataaattat caagcaatgc cataaattta
    10141 ttaataaatg aaggatggag atgtgtttct ggctcatcta ttaatagaag agtcccattc
    10201 tcaatataca aacagacttg tacacaaaac ttaataaacg atatttcccc actactcaaa
    10261 gggtaacatt tattttcaat aagcctcaaa ggctcgccag agagaataat ttcagaatat
    10321 aatgatagtc tagattcttc gcctcgagaa ttaagctcat ttaatttaac aaatggtgaa
    10381 ttttcaccgc cacatttgat tactaaatcg ttgttactat ttagaacact cagtgcatca
    10441 acaaatatat tccacctttg attatagccg atagcgtcgt tactcctcgc tagttgcact
    10501 attaaatcat tcaagtttaa tttggatttt gattcacgat ttaaagtcaa tcttttgtac
    10561 catatcaatg attttattct tttatcggtt ggaaatgaac acttactttc atttgttgga
    10621 gaaaaagcaa tgagcctact aatttgaatt cgttcttcaa tgctcacacc gttagaatca
    10681 actacagcca ccaaattatc ctttccttta atcgcagcca atgcgatttc tctaagcgtt
    10741 tggctttttc ctacaccatt ctcgcctata attatggaaa ttctttttgg taaatcatgc
    10801 tcgtgatcaa aattaaaaac ataagataca tcttcttcat taactttatt cgaatagcta
    10861 atcttgatgt gctgtgataa attacccaac tcctcatatt gaataccgga aagaactgtt
    10921 cctgcatttt tgaaagtaaa atacgactca gactctctaa tgaaagattt attaaagata
    10981 tcagaagaga ttgctttttt cctcaaattc tctgcactag cgtcactttt cttagaaaca
    11041 acatcattaa tgaaatttaa tatatatttg gattcattca ccccaaaaaa tcttactagt
    11101 cttcgataat tattcatatc ctgaagcatg acaaaataat cattaaaccc ctcatccttt
    11161 aaattagatt cttccttttt cttcactcgc cttatcagtt ctgcttttcc atttcgttcc
    11221 tcctctgaat tcaaaaaacc aatataacca ttcagtgaaa ttatatcctt acactctttt
    11281 ttattaaaaa tagatatttc gactctactc aaatatccaa aatcattcca atcgcttctt
    11341 gatgggacta tttttatata attaccagaa tcagatatct gttgattatt tgtaattaaa
    11401 aaatataaac tataattttt atttttcttg actaacatta ttaccctctc acttcattag
    11461 tgatgattta ttttggaatt attttacaca cttataccta gcgcgcaatc gtatccccgc
    11521 cacgcctgcc cgctttatgt agaggttttc atgcacctgc atgatctacg caaaagcccg
    11581 ccagttctgg cgggccttag caaaaacgat cctcaaacga tcatgcgatc tcatgcggca
    11641 tagacatgca ctacagagct aacgcctcgc aagggctcgt tgttcaacct tgctgacgcc
    11701 agaagctagt tcagacgcca gcaacgtttc ttaatgcagc cagctgtcgt cttcccacac
    11761 cttctgcata attttcatca cttgttttct ttcttcgtcc agttgcaatc cagtaagttc
    11821 cacaccgtta gagctacctt tgcggatacg aattaccgtt ttgggataca gagggcgcag
    11881 attgcggtaa agctcggatt caagagcgtc cagggtagac tggctaatct tctgctcttt
    11941 atcgatcatt atttcaatgc gcataaaagt cacctcagct gatgacatcc attgagcggt
    12001 tgtattcgtg ggttctgatt tttgccatga gttcatcagt caattcagaa acccactgca
    12061 gagccagccc cttctcttca tcactacact cactagccgc tacaagctta agaaaaaaat
    12121 caatgcgctg gagcttcaaa gactccaaaa aatagtcctg catctttcct cctatgacac
    12181 cacacgcaat actgtatgca taaccactgt ttatatttac agcatataat aatcttactg
    12241 atgtaaaacg tttttttacg ttcatcagcc tgatatgcct ggtattatta agagcacgaa
    12301 ttgttaaccc gcgtaattaa tacaggttcc gccactgatc atcttcctgc aaacgctggt
    12361 tccgatagaa gatacgcagg cctgctcctg acggaatact gcctccgcga aggagtaaat
    12421 cgacctcttt ctcgctgcca tcaaatcctc tggacttcag ctcatacacg agctgcagtc
    12481 gctgatggtc tgtaattcgc tgtttgtagt ctttacgccg tttcggtttc accaggcgta
    12541 accttgctgc cagttcccgg cgctcttttt tgctcatact gtgcaggtaa tcgtgcaact
    12601 ccttgtcatc catgctggta atgtccgttc tggggttccc atcagctgat ttatctttct
    12661 cctgttggtt caaattttca gcaaggagac agttattgcc acgagtccaa ggggcgcaag
    12721 cgccctagtc ggctgccgcc tcctgaacgt caacggcttt acgaaccatt ttccacttca
    12781 ctgcatgagt gcagatcttg ccttctgcaa tgggtgacca gatgccataa atacgaatac
    12841 cgtgatcgcc ataggcggtc ggctcttcat tgatttcata agcggttctg atcaagtgat
    12901 atttgcgagg aaccagcacg ccgccctgcc tcataatgta ggtggcaaaa cagccagcat
    12961 cagcagcagc caggatggca tcaaggcgcg ggttatccag taccggcgca cctgcttttt
    13021 tgtcaccctg ctgccttgcc gcctgaccag ccaacaaccg cagttcacgg taagcctgac
    13081 gccctggaat accaaagaag cggaattgct gaacacgatg cagagacgcc cagggattaa
    13141 cgtattcagc gttatcacgc agggatttac ccgtttcctt gctgatctcg ccagccagac
    13201 cacgcccgtc aatgttctta ctgatgtatt tcgcgatgta gcttgtcggc gttcctttgc
    13261 gcgggtttat cagctcagat ttaaagcgtg gaccagtgtt attacccagt tcctcgcggt
    13321 cttcacggat ggcaaactta cgcaacaatg cagtaatggc gcggcggtct tttttgcgca
    13381 taaaacacaa caggtgccag tgaactgtac cgtcatgatg cggctcagcc acccgcacgc
    13441 cataccagcg caacccggct ttgtgcatcg ccttacgaaa tgcagcaaac atgccgacca
    13501 gataatcgct gctttgtctt accgtcgcat ttgtccaggt tgggtttggt ctgccgttat
    13561 tgagcgtgga atggaaacgt gacggacagg taatggtgta gaaaacggcg cagtcaccgc
    13621 gcatttccgc gataagctcc agacctttaa cacaggccat catctcattg cggcggtgcg
    13681 ccgggttgct gctgctggcg tttaccacgt cttccatatc cagcgtgtcg ccctcttcgt
    13741 tcaccagttc atgagaacgg aaaaactcca atgacttgcg gcgctgctca cgtttatgca
    13801 tcacggcttc atagctgaca tagggagatg cttttttgct gaccaggcag acagcacgca
    13861 actgctcttc ccgccattcg caacgcattt tccataattt ccggtaccac cagtcggcgc
    13921 acaacatacg cgccagcgaa cccggaatga gttcataggg cacgggttta cggcggtttc
    13981 ttttccgacg gagttgctca aacgcaggcg ggatgacatc cagacgcagg gtttccgctg
    14041 ccaccttttc ccatgtcttg cggatttctt ctggcttaac gtcatcggtg gcatacaaat
    14101 caccacaagc tgcatcaagg cacatgctca tatgcgcagc gacaagggta gacaggcgtt
    14161 tcacctgatc ctgactcatt tcaggcagaa tcagcaggcc gtccagccct acatggcttg
    14221 ccataaaacg aaaagatgca gatagctggc tgtcgcgtac atgctccagt cgttccagac
    14281 atggcttaat cgtctcacgt aaatagcggg aataagcctt tggcctgccc aggctgctga
    14341 agtattcaat acgttgcatc agcggcttgc tgatatggga aggctgggcg ttgacgtccg
    14401 ccagaatgac catatccgga ttaaaacgct gctgctcatg cgccagcttt gcccggctaa
    14461 tgagcttatc ctgctccatt tcgtgctgga caggatcacg tgattcataa aaaaaataac
    14521 gctcccagac ctgatcactc agtgcctcgc ggcgcaactg ttcctgctcg ttatcggcag
    14581 cgtacagagt gatcaggttt gaaagcgcag aaaccggcgc aacttccgcc gggtccagat
    14641 aagggttaat ggcctttttc gggctgttcc atgagaacgc tgcggcagcc tcgttaaagc
    14701 cgcagcagtt gttcatatcg gcatggctca tgcacgtact ccgtacacgg cagaactatc
    14761 cacgccacgc gaataatcaa atcccaccca gcagcgcggc ccggaaacag caatgatttc
    14821 tgttgctgat ttaccctcgc cagctgccac accgatgctg cgttttacct tgatatagtg
    14881 gtgagtaaaa ttgcgataca gcgaacggat cagggatgtg tcactgttag aaacaatgac
    14941 cggatgtcct tctgatgacc gatgttcaag aacggatgct aggtgatact ggtcatcttc
    15001 agtgaaacca tcagtgtgat agccggaaaa cgtaccgtca tacggtggat cgcaatacac
    15061 cacatccccc gccttcaaca tcgccagcgt ttcatcaaag ctggcgcaga taaacgttgc
    15121 tcgctgggct ttttctgcaa atgcgcgaat ttctttttca gggaaatacg gatttttata
    15181 attgccgtag ggaatgttga aatgcccgct cttgttatag cgacataaac cacggtaacc
    15241 gtgacgattg agatacagga aatataccgc tttcatgaaa tcagtaattt cagttgagta
    15301 attaaactcc tgccttatgt tgtaataagc cacctccctg tttgcgatct caaataaaac
    15361 tctgg
//
LOCUS       DADKRT010000100        15314 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.101, whole genome shotgun sequence.
ACCESSION   DADKRT010000100 DADKRT010000000
VERSION     DADKRT010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15314
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.101"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..320)
                     /locus_tag="JQ356_002600"
     CDS             complement(<1..320)
                     /locus_tag="JQ356_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HAY4622646.1"
                     /translation="MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVAL
                     KTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGING
                     KWVR"
     gene            complement(328..513)
                     /locus_tag="JQ356_002601"
     CDS             complement(328..513)
                     /locus_tag="JQ356_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HAY4622647.1"
                     /translation="MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIII
                     KADKDVEELLETRSDLY"
     gene            complement(510..3149)
                     /locus_tag="JQ356_002602"
     CDS             complement(510..3149)
                     /locus_tag="JQ356_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HAY4622648.1"
                     /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI
                     ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKL
                     PQTEQSPAAPKTLAQWQSMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
                     KVKFQGQLKGQQLTVSELDVIAFEYQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
                     EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS
                     GRLGVKVDNWQAGLENALISGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG
                     EAKQADLILYARLPAQLSGSLTDPTLAFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV
                     TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
                     DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
                     SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
                     GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
                     MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
                     EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
                     SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
                     RSSTNINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFMLWRSLRFGDNLQA
                     WLEQNARLPGNDCPQGKECEEKQ"
     gene            3357..4346
                     /gene="ldhA"
                     /locus_tag="JQ356_002603"
     CDS             3357..4346
                     /gene="ldhA"
                     /locus_tag="JQ356_002603"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY4622649.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
                     RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPANYHLLNEA
                     AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
     gene            4457..4879
                     /gene="hslJ"
                     /locus_tag="JQ356_002604"
     CDS             4457..4879
                     /gene="hslJ"
                     /locus_tag="JQ356_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HAY4622650.1"
                     /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP
                     VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD
                     NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN"
     gene            complement(4876..5142)
                     /locus_tag="JQ356_002605"
     CDS             complement(4876..5142)
                     /locus_tag="JQ356_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HAY4622651.1"
                     /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEA
                     NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            5416..8940
                     /gene="nifJ"
                     /locus_tag="JQ356_002606"
     CDS             5416..8940
                     /gene="nifJ"
                     /locus_tag="JQ356_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HAY4622652.1"
                     /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
                     VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DSYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAI
                     GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQTLPGSVRSVAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGKRETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF
                     TVGIYDDVTNLSLPLPENTQPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
                     IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
                     FHLTQILPGDSALAELQGAIAKSYSSKGQDLVEGNWQALALARESVEEVPLQPVNPHS
                     ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
                     IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
                     APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL
                     ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
                     STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
                     ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
                     GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
                     MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
                     TATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQPEVAEQL
                     WKDAAADLQKRYDFLAQMAGKAEKSNTD"
     gene            9306..10439
                     /gene="ompN"
                     /locus_tag="JQ356_002607"
     CDS             9306..10439
                     /gene="ompN"
                     /locus_tag="JQ356_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpN"
                     /protein_id="HAY4622653.1"
                     /translation="MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL
                     KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
                     GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGFSTTYDLGMGFSAGAAY
                     TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN
                     KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADVGATY
                     YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF"
     gene            10580..11014
                     /gene="uspF"
                     /locus_tag="JQ356_002608"
     CDS             10580..11014
                     /gene="uspF"
                     /locus_tag="JQ356_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310024.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HAY4622654.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEL
                     AKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
     gene            11595..12485
                     /gene="sitA"
                     /locus_tag="JQ356_002609"
     CDS             11595..12485
                     /gene="sitA"
                     /locus_tag="JQ356_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707262.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter substrate-binding
                     protein SitA"
                     /protein_id="HAY4622655.1"
                     /translation="MLLGCLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAE
                     VSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSS
                     GVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKA
                     KITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQV
                     RKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYID
                     LLKVTTSTLVQGIKAGKREK"
     gene            12485..13312
                     /gene="sitB"
                     /locus_tag="JQ356_002610"
     CDS             12485..13312
                     /gene="sitB"
                     /locus_tag="JQ356_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter ATP-binding
                     protein SitB"
                     /protein_id="HAY4622656.1"
                     /translation="MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGS
                     GKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVM
                     MGRYGYMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQ
                     GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGT
                     VLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR"
     gene            13309..14166
                     /gene="sitC"
                     /locus_tag="JQ356_002611"
     CDS             13309..14166
                     /gene="sitC"
                     /locus_tag="JQ356_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitC"
                     /protein_id="HAY4622657.1"
                     /translation="MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
                     ALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFF
                     GLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF
                     DENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
                     RLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRR
                     AHKALEDRS"
     gene            14163..15020
                     /gene="sitD"
                     /locus_tag="JQ356_002612"
     CDS             14163..15020
                     /gene="sitD"
                     /locus_tag="JQ356_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitD"
                     /protein_id="HAY4622658.1"
                     /translation="MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMG
                     DAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGM
                     FAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS
                     FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRF
                     HIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNA
                     HTQDLLSPN"
BASE COUNT         3847 a         3851 c         3703 g         3913 t
ORIGIN      
        1 tttcgtaccc atttaccgtt tatcccttgt acatattccc ccggtttggc ccgagctacg
       61 agcttttgcc cggcgagttt cgcgatatca tctacagaca cattattttg ctttgccagt
      121 tgttggtaac tcgctttacg ttcggcatta atgtcggtta ctaatttctc tgtttcagca
      181 tccgttttca gcgcaaccag ataaccataa aatgtttccc cgacccgccc ctgcgttctg
      241 gcttcatcca gagtcaatgc cattacattg ctgcttacca gcccaacaag aaacgcacaa
      301 agaagtaatg ttttcttcat catcgcctca gtaaagatcg ctacgagttt caagcagctc
      361 ttcgacatct ttgtctgcct tgatgatgat ctcatgctca attttaacgt tcatattgat
      421 agtgatcggt tccttgggcg cagcgacttc aatacgcggc gtacaggcag ccagcataaa
      481 agatgacgtc aacgcagcca gtaaaatttt cattgttttt cctcacactc ttttccttgc
      541 ggacagtcat ttcccggcag acgtgcgttc tgctccaacc atgcctggag attatcgcca
      601 aagcgtaaac tgcgccacag cataaaaata ttctcttcat gatggtaatt aaggtttacc
      661 gtaccgcttt taccatcaac gcgactggta cctgtaatgt tggcctgcat ggttaataaa
      721 ccgagattat ctaaattaat atttgtcgat gaacggctaa tttccatata gcgcaaccag
      781 ttaattgctg aacccgcagt catattgtct ttcaccaccg catctgcggt gtctttatcc
      841 agccgcaagg tcattggccc gctatttgcc agccaaccat ctttcactat ccatttttcg
      901 ttgtttagcc ataacggcaa tgcaccacta aatgccccgg acatggcgaa ttgtttcgga
      961 ttgacggcgc taaccagttc gctggatgag agattattca gccgcaacag cgccgggtca
     1021 tgttgcggca tacgtaattg tttcatcagt acgttaccgc ctaacacatc gacgctaaca
     1081 tcagtcaaca gcaagggttc ttcttcagtc cacggataac gcccttgcaa atcagccgta
     1141 atatttttcg ctgtcaccag attaatcact tcggcaattc gcaacgtaac ggggccgcga
     1201 gtccccagat gccaggctcc atcggcaaaa cggaaaggca ggacaaaatc gacaccgtta
     1261 acctgattat ctggcatcca ggcactaccg cctttcaaca cgccgtgccc tcccgcgcgg
     1321 aatccttgtt caggcgcagc agaaaatgca acctgagcat acagttcacc atcgcgtaag
     1381 ttcatcttcc agtcgggtgg caccagcggc tggaatacag tcagtgattg ttttggccac
     1441 caggcgttac cgcgcagacg aataccgtcc cagcgaccat ttacccgaac cgggccaatc
     1501 tcaccagcat gtaaatcgcc tttaaagagg aaatacgtcg gatcgcgccc atcgacgcta
     1561 aattttaagg ttgatggcgg taacacactg ccgccagtga acagcgtttg cccggcgtcc
     1621 agtgacagcg cgccgctgaa ggagggatgc tgtgcgtcac gtacccagac gacgggcttg
     1681 tccagaatta atcgcggctt ttctaccgtc atcgtaccgt attgtaactg gtcgaaaccg
     1741 gtggagaggt cggtcagcgt aatcgtgctg tcatgccatt caccttttcc tgcgacatcc
     1801 caggtggcat tcatcggtgt aaaactgcct tttccccagt agcgccactg ccagcggccc
     1861 gcgtcaggga gaaaatcatt cgccagccca tccatatgca gcacgaaatc gcccagttca
     1921 ttttcatgcg cctgcaaaat ggcctgcaaa cgtccgtcaa caccacgttg ggtgactttt
     1981 acacccgcta aaggccagcg gatttcatcg atgtccagcg aatcgatgac tcttcccttt
     2041 gaacgaagta acgcgcctgg ctcaaaggcc agcgttgggt cagtcagact tccacttagc
     2101 tgcgcgggta agcgggcata taaaatgagg tccgcctgtt tcgcttcacc ggtcagctgc
     2161 agaggcagct ggctgttatc catgcttaat tttcctgggc caaaatttag caccgcgttg
     2221 cctttacccg cttgcccctg ggtcagcaca ctcagtcgtc cgctgatcag agcgttctca
     2281 agccctgcct gccagttgtc gactttgaca cccagtcggc cactcaaagg aaaacctgca
     2341 tacggccaac tccagcgacc atcgcttacg gtcaattgtt gacgagtaat ttgccacggc
     2401 aaatcgagca acggatcgcc gttatcacgt gccagcacaa tcaattgccc gctattttcc
     2461 tgccagtcca gctctgcatc caccagtgac ggttcctgcg gcaagtttaa cgtcgcagta
     2521 gcatgcccac ttacaggaag tccatccggc acgagcggca tagtaaattc ccccaccagt
     2581 ttaaccggcg gctgatattc aaacgcgatg acatccagtt cgctgactgt aagttgttgc
     2641 cctttcagct ggccttgaaa tttaactttt tcgccctgat aacgcagttg ctggatatca
     2701 gaggttaatg cgagagagag ttttccctgc cattcctgcc agggagaaaa aatcagttta
     2761 tcgatattga tccaggtgtt aggcagcatg gactgccact gcgcgagggt ttttggagca
     2821 gctggcgatt gctccgtctg cggcaatttc gccagacaag cagaatcaag ttctaccgtg
     2881 ccgacgttca ataaccagcg gctgggatgt gaaaggctgg cgttggtgat atgcgcaagc
     2941 tgacaatctc ccaccagata acggagatcg ggaatgatta aacctttacg cgtaatgcgt
     3001 gggctttcat ctaatgcaat acgtgtcccg agcggtagcc agatgcccgc cagcgtggga
     3061 acccacagcc cgagcgtcat cagcagcgtc aacggcacaa gaataatcag taataacagc
     3121 gcgagaacgg ctttatattt acccagcatg ggtagttaat atcctgattt agcgaaaaat
     3181 taagcattca atacgggtat tgtggcatgt ttaaccgttc agttgaaggt tgcgcctaca
     3241 ctaagcatag ttgttgatga atttttcaat atcgccatgg ttttcaatta tatttgaaat
     3301 tttgtaaaat atttttagtg gcttaaatgt gattcaacat cactggagaa agtcttatga
     3361 aactcgccgt ttatagcaca aaacagtacg acaagaagta cctgcaacag gtgaacgagt
     3421 cctttggctt tgagctggaa ttttttgact ttctgctgac ggaaaaaacc gctaaaactg
     3481 ccaatggctg cgaagcggta tgtattttcg taaacgatga cggcagccgc ccggtgctgg
     3541 aagagctgaa aaagcacggc gttaaatata tcgccctgcg ctgtgccggt ttcaataacg
     3601 tcgaccttga tgcggcaaaa gaactggggc tgaaagtagt ccgtgttcca gcctatgatc
     3661 cagaggccgt tgctgaacac gccatcggta tgatgatgac gctgaaccgc cgtattcacc
     3721 gcgcgtatca gcgtacccgt gacgctaact tctctctgga aggtctgacc ggctttacta
     3781 tgtatggcaa aacggcaggc gttatcggta ccggtaaaat cggtgtggcg atgctgcgta
     3841 ttctgaaagg ttttggtatg cgtctgctgg cgttcgatcc gtatccaagt gcagcggcgc
     3901 tggaactcgg tgtggagtat gtcgatctgc caaccctgtt ctctgaatca gacgttatct
     3961 ctctgcactg cccgctgaca ccggcaaact accatctgtt gaacgaagcc gccttcgatc
     4021 agatgaaaaa tggcgtgatg atcgtcaata ccagtcgcgg tgcattgatt gattctcagg
     4081 cagcaattga agcgctgaaa aatcagaaaa ttggttcgtt gggtatggac gtgtatgaga
     4141 acgaacgcga tctgttcttt gaagataaat ccaacgacgt gatccaggat gacgtattcc
     4201 gtcgcctgtc tgcctgccac aacgtgctgt ttaccgggca ccaggcattc ctgacagcag
     4261 aagctctgac cagtatttct cagactacgc tgcaaaactt aagcaatctg gaaaaaggcg
     4321 aaacctgccc gaacgaactg gtttaatgtt gcagctcccc tgcaatccag gggagctgat
     4381 tcagataatc cccaatgacc tttcattctc tattcttaaa atagtcctga gtcagaaact
     4441 gtaattgaga accacaatga agaaagtagc cgcgtttgtt gcgctaagcc tgctgatggc
     4501 gggatgtgta agtaatgaca aaattgctgt tacgccagaa cagctacagc atcatcgctt
     4561 tgtgctggaa agcgtaaacg gtaagcccgt gaccagcgat aaaaatccgc cagaaatcag
     4621 ttttggtgaa aaaatgatga tttccggcag catgtgtaac cgctttagcg gtgaaggcaa
     4681 actgtctaat ggtgaactga cagccaaagg gctggcaatg acccgtatga tgtgcgctaa
     4741 cccgcagctt aatgaactcg ataacaccat tagcgaaatg ctgaaagaag gtgcacaagt
     4801 ggatctgacc gcgaaccagt taacgctggc gaccgcgaaa cagacattaa cttataagct
     4861 ggcggattta atgaattaat agctgccaca gctcccggcg gcaagtgact gttcgctaca
     4921 gcgtttgccg ttgggtaatg cacacatccc aatcgccgtg ccatccagtt gacgggcaac
     4981 agaaagcgaa ccgccgatca ttgcacaatt tgcttctcca ctactggaca tcgacgcttt
     5041 taaacctggc gctacgtgcg ccgcagtcgc ctgctgaaca ggttcactac tacacgccga
     5101 caacaataaa gcggcacacc ctacccaaaa cgctgctcgc atcttttctt cctctgatct
     5161 tcaagccaaa cgacaccgcc ataaataata ggcagcacag agggcgacat cgagagctgt
     5221 cctgcgcgtt gccccgcatt tttacttttt tatggctatt tttttgccct ctgtttgatc
     5281 aaaacattca ttacgctgat gtgggggaca caaaagcgaa aatgcagaag aaagccattt
     5341 gctaaaattg aaagattact actgggcgcg cagcaatttc gtgcgcccct catttgcgca
     5401 atgtaagggt gtcatatgat tactattgac ggtaatggcg cggttgcttc ggtggcgttt
     5461 cgcaccagtg aagttatcgc catctaccct attaccccca gttccacgat ggcagaacag
     5521 gctgatgcct gggccggaaa cggcttgaag aacgtttggg gagacacacc acgcgtggtt
     5581 gaaatgcagt cggaagcggg tgctatcgct accgtgcatg gcgctttgca gacgggtgcc
     5641 ctttcaacat cgtttacgtc atcgcagggt ttgctgctga tgatcccgac actgtacaaa
     5701 ctggcaggcg aactcacacc gtttgtcctg catgtagcgg cacgtaccgt tgccacacat
     5761 gcactctcta tttttggcga tcattccgac gtcatggcgg tgcgccagac gggttgcgcg
     5821 atgttgtgtg cggcaaacgt ccaggaagcg caagactttg ctctcatttc gcacatcgcg
     5881 acgctgaaaa gccgcgtgcc atttattcat ttctttgatg gtttccgcac gtcccacgaa
     5941 atcaataaaa ttgtcccgct ggccgatgac acgattcttg atctcatgcc gcaggccgaa
     6001 attgatgctc atcgcgcccg ggcgctcaac ccggaacatc cggtgatccg tggtacgtcc
     6061 gccaatcctg actcttattt ccagtctcgc gaagccacca acccctggta caacgcagtc
     6121 tatgaccatg ttgaacaggc gatgaatgat ttctctgccg cgacaggtcg tcagtatcag
     6181 ccgtttgaat attacgggca tccgcaagct gaacgggtga ttatcctgat gggctcagcc
     6241 attggcacct gtgaagaagt ggttgatgaa ttgctaaccc gtggcgaaaa agtcggcgtg
     6301 ctgaaagttc gcctgtaccg ccccttctca gccaaacact tgctacaaac tctaccggga
     6361 tccgtacgca gcgtggcggt actggacaga accaaagaac ccggtgccca ggcagaaccg
     6421 ctctatctgg atgtgatgac cgcactggca gaagccttta ataatggcaa gcgcgaaact
     6481 ctgccccgtg tcattggtgg gcgctatggt ctttcatcca aagaatttgg cccggactgt
     6541 gtactggcgg tatttgccga gctcaacgcg gctaaaccga aagcgcgctt tacggttggt
     6601 atttacgatg atgtaaccaa tctgtccctg ccgttgccgg aaaacaccca gccaaactcg
     6661 gcgaaacttg aagccttgtt ttatggcctt ggtagtgatg gcagcgtttc cgcgaccaaa
     6721 aacaatatca agattatcgg taattccacg ccgtggtacg cacagggcta ttttgtttac
     6781 gactccaaaa aagcgggcgg cctgacggtt tctcaccttc gcgtgagcga acagccgatt
     6841 cgttccgctt atctcatttc ccaggctgat tttgttggct gccaccagtt gcagtttatc
     6901 gataaatatc agatggctga gcgtttaaaa cctggcggca ttttcctgct caacacgccg
     6961 tacagcgcag atgaagtgtg gtcgcgcttg ccgcaagaag ttcaggccgt gttaaaccag
     7021 aaaaaagcgc gcttctatgt gattaacgcg gcgaaaatcg cccgcgaatg tggcctggcg
     7081 gcccgtatta ataccgtcat gcagatggct tttttccatc tgacgcaaat tctgcctggc
     7141 gatagcgccc tcgcagaatt gcagggtgcg attgccaaaa gttacagtag caaaggccag
     7201 gatctggtgg aaggcaactg gcaggctctg gcgctggcgc gtgaatccgt agaagaagtt
     7261 ccgttgcaac cggtaaatcc gcacagcgcc aatcgaccgc cagtggtttc cgatgccgcc
     7321 cctgatttcg tgaaaaccgt aaccgcagcg atgctcgcag ggcttggtga tgccctcccc
     7381 gtttcggcgc tgccgccaga cggcacctgg ccgatgggga ccactcgctg ggaaaaacgc
     7441 aatatcgccg aagagatccc catctggaaa gaggaactct gtacccaatg taaccactgc
     7501 gtcgccgctt gcccacactc agctattcgc gcaaaagtgg taccacccga agcgatggaa
     7561 aacgcccctg ccagcctgca ttcgctggat gtgaaatcgc gtgatatgcg cgggcagaaa
     7621 tatgtcttgc aggtggctcc ggaagattgc accggttgta acctgtgcgt cgaagtttgc
     7681 ccggcgaaag accgtcagaa tccagagatt aaagccatca atatgatgtc gcgcctggaa
     7741 catgtcgaag aagagaaaat caattacgat ttcttcctca acctgccaga aatcgaccgt
     7801 agcaaactgg aacgtattga tattcgtaca tcgcagctga ttacaccgct gtttgaatat
     7861 tccggtgctt gctccggttg tggcgagacg ccgtatatta aattgctgac tcagctctat
     7921 ggcgaccgga tgttgatcgc taacgccacc ggctgttctt caatttatgg cggtaacctg
     7981 ccctctacac cgtataccac cgatgccaac ggtcgtgggc cggcatgggc gaactctcta
     8041 tttgaagata atgccgaatt tggccttggt ttccgcctga cggtcgatca acaccgtgtc
     8101 cgcgtgctgc gtctgctgga tcaatttgcc gataaaatcc cggcggaatt actgacggcg
     8161 ttgaaatcag acgctacgcc agaggttcgt cgagaacagg tcgcagcttt acgccagcaa
     8221 ctcaacgatg ttgccgaagc acatgaactg ctacgtgatg cagatgcact ggtggaaaaa
     8281 tcaatctggc tgattggtgg tgatggctgg gcttacgata tcggctttgg cggtctggat
     8341 catgtattga gtttgacgga aaacgtcaac attctggtgc tggatacgca atgctattcc
     8401 aacaccggtg gtcaggcgtc gaaagcgaca ccgctgggtg cagtaactaa atttggcgag
     8461 cacggcaaac gtaaagcgcg taaagatctt ggcgtcagta tgatgatgta cggtcatgtt
     8521 tatgtggcgc agatttctct cggcgcgcag ctgaatcaga cggtgaaagc gattcaggaa
     8581 gcggaagcgt atccgggacc atcgctgatc attgcttata gcccgtgtga agagcatggt
     8641 tacgatctgg cactcagcca tgaccagatg cgccaactca cagctaccgg cttctggccg
     8701 ctatatcgct tcgatcctcg tcgtgccgat gaaggcaaac tgccgctggc gctggattca
     8761 cgcccgccgt cagaagcact ggaagaaacg ttacttcacg agcaacgttt ccgtcgtctg
     8821 aattcgcagc agccagaagt ggcagaacag ttatggaaag atgctgcagc tgatttgcaa
     8881 aaacgctatg acttcctggc acaaatggcc ggaaaagcgg aaaaaagcaa caccgattaa
     8941 atgctctgga taaggattat ccaattctaa aaaaaagccc ggacgactgt tcgggcttgt
     9001 ctttttatat gttggaaaat cagtggcaat gcaatggccc aacagaaaat aaaatctgtg
     9061 acaataaagg catataaccc gcgcagaata acgtatagaa aattaaaagt ataattttta
     9121 ttttgtatgt attatcttcg atacattcac cagacttatt atcatttcag aagaattatt
     9181 tgattaaggt tttacttaag gcgtaacaaa tgatatttat cggctaactg aacttctcct
     9241 ttaggatgtt ttcactcccc ggaatgggga taaaaggcaa ataaaataac taaaggattt
     9301 attcaatgaa aagcaaagta ctggcacttt taattcctgc cctgctcgcc gcaggtgctg
     9361 cacatgcagc cgaagtttat aataaagacg gcaacaaatt agatctgtat ggcaaagttg
     9421 atggcctgca ttatttttct gataattcag cgaaagatgg cgatcagagc tatgcgcgtc
     9481 tgggttttaa aggcgaaacc caaattaacg atcaactcac tggctacggt caatgggaat
     9541 acaatattca agcaaacaac actgaatctt caaaaaacca gtcatggacc cgtctggcat
     9601 ttgccgggct gaaatttgca gattacggtt ctttcgatta cggacgtaat tatggcgtaa
     9661 tgtacgacat cgaaggctgg accgatatgc tgcctgaatt tggcggtgac tcttatacca
     9721 atgcagacaa ctttatgact ggtcgagcca atggcgtcgc gacttatcgt aatactgatt
     9781 tcttcggtct ggtaaatggt ctgaacttcg cggtgcagta tcaaggtaac aacgaaggag
     9841 ccagtaatgg tcaggaaggc accaacaacg gacgtgatgt tcgccatgaa aacggtgacg
     9901 gctggggttt ttccacaaca tatgatttag gcatgggctt tagcgctggt gcggcataca
     9961 cctcttctga ccgcaccaat gaccaggtta accatactgc ggcgggtggt gataaagcag
    10021 acgcgtggac tgctgggcta aaatacgatg ctaacaatat ttacctagca accatgtatt
    10081 cagaaacgcg taatatgacc ccgtttggcg acagcgatta tgctgtggca aacaaaaccc
    10141 agaattttga agtcactgcc cagtaccagt ttgattttgg tctgcgtccg gcagtctctt
    10201 tcctgatgtc taaaggccgt gacctgcacg ctgccggtgg tgcagacaac ccggcaggtg
    10261 ttgatgataa agatctggtt aaatacgccg atgttggcgc gacttactat ttcaataaaa
    10321 acatgtccac ctacgttgac tataaaatca acctgttgga tgaagatgac agcttctacg
    10381 ctgccaatgg catctctacc gatgatattg tcgctttagg tctggtttat cagttctaaa
    10441 tcctcctgcc cgctgttatg gcgggctttt tctgcttatt cttcctcctt tgatctaaat
    10501 taaaaatgtg aactccatca ttacacaaaa agtgtcatct ggcgttacac tttatgcgga
    10561 tactaaaaca ggaggtttta tgaacagaac gattcttgtc cctatcgata tttccgattc
    10621 agaattaact caacgcgtga ttagccacgt tgaggcagag gcaaagattg acgatgcaga
    10681 ggttcatttc ctgacggtaa taccttcact gccctactat gcctctctgg gtttagcgta
    10741 ttccgcagaa ttaccggcaa tggatgacct gaaagcggaa gccaaatcgc aactggaaga
    10801 gatcattaaa aaatttaaac tgccaaccga cagagtgcat gtccatgttg aggaaggctc
    10861 gcccaaagac cgcattctgg aattggcgaa gaagatcccc gctcatatga tcatcattgc
    10921 ttcccatcga ccggatatca ccacttatct gctcggttcc aacgccgcag ctgtagtgcg
    10981 tcacgcagag tgctccgtgc tggttgtgcg ctgacactaa cgcccgcaca ttgctgcggg
    11041 ctttttgatt catttcgcaa atgtgctgac attttcccct ctaatccgta ccatacacgc
    11101 cactgttttt atatcagatt tcttatgctg ggcattccgg catgacgcat actcttctga
    11161 tgccatataa cgaattgagt cgcttttaaa tgtcgcaaaa tcaagaaatt agtaagaaag
    11221 aacaatacaa cctgaacaag taagggcaaa aatcacaact atctgactca taagtatttt
    11281 atttattttt caatatgtta aacattatca gcgacaacaa taagctacga taacccactc
    11341 tttttttgcc ccatttttgc catcaacaat tttcctcata aagtcatttc aaagcctaat
    11401 agctgctcta cttttttcct caatatcatg tcgccagcag gaaacaacct aatccctgtt
    11461 ttaggcctca aagctgttaa tgataattat tttcattttg tataggttat gctataaaac
    11521 atagccgttg ctatgtttgt tctaattttg ctcactatag gtactaaatt atgcactcaa
    11581 taaaaaaagt aaccatgctc ttggggtgcc tcgccctcac ctgctcgatc gcatttcagg
    11641 caagtgcaac tgaaaaattc aaggtcatta caacatttac catcatcgcg gatatggcca
    11701 aaaacgtggc tggagatgct gcagaagtct catccataac caagcctggt gcagaaattc
    11761 atgagtatca gcctacccct ggcgatatta aacgtgcaca gggggcacaa ctgattctcg
    11821 ccaatggtat gaatctggaa ttgtggttcc aacgctttta ccagcatctc aatggggttc
    11881 cagaagtaat tgtctcttcg ggtgtgacgc cagtagggat caccgaagga ccctatgagg
    11941 gcaaacctaa tccccatgca tggatgtcgc cagataatgc tctgatttac gtcgataata
    12001 ttcgtgatgc gttgataaaa tacgatccgg caaatgcaca aacctaccaa cgtaatgccg
    12061 atacttataa agccaagatt acccaaaccc ttgcccccct gcgtaagcag attacggaac
    12121 tccctgagaa tcagcgatgg atggtcacca gtgaaggggc tttttcttat ctcgcacgcg
    12181 atttggggct aaaagagctt tatctgtggc cgattaatgc cgatcaacaa ggaacaccgc
    12241 agcaggtacg taaggttgtt gatatagtta agaaaaatca tatcccggca gtctttagcg
    12301 agagtacgat ttccgataaa ccagcgcgtc aggttgcgcg tgaaaccggc gcacactacg
    12361 gcggtgtgct ctatgtcgat tccctgagca cagaaaacgg cccggtacct acgtatatcg
    12421 accttcttaa ggttactacc agtacgctgg tacagggaat taaagccggg aaaagggaga
    12481 aataatgatg caatctgcag gcattgtcgt taatgatgtt actgtcacct ggcgtaacgg
    12541 gcacacagca ctgcgcgatg catccttcac agtaccaagt ggatctattg ccgctctggt
    12601 tggggtaaac ggttccggaa aatcgacgtt gtttaaagcg attatgggat ttgtgcgtct
    12661 gaccagcgga aagatatctg ttctgggtat tcccacgcga caggcgctac agaaaaacct
    12721 ggttgcctac gtccctcagt cagaagaggt tgactggtca tttcctgtac tggtggaaga
    12781 tgtggtgatg atgggccgct atgggtatat gggtatgttg cgtatagcca aaaagaggga
    12841 tcgtcagatt gtcaccgatg cgctggaacg tgtcgatatg gtggattttc gccatcgtca
    12901 aatcggcgag ctttccggtg gacaaaagaa acgcgtcttt ctggcgagag cgattgcaca
    12961 gcagggtgat gtgatcctgc tggatgaacc ttttaccggc gttgatgtga aaaccgaagc
    13021 gaaaatcatc agcctgttga gggagttacg cgcggaaggc aaaacgatgc ttgtctcaac
    13081 gcacaatctc ggctcagtca cgacattttg cgattatacg gtcatggtca aaggcaccgt
    13141 cctggcaagc gggccgacag acaccacttt tacagccgag aacctggagc tggcttttag
    13201 cggcgtactg cgccatgtca cacttaacgg ctcggaagaa agcattatta ctgacgatga
    13261 acgccctttt gtggcacatc gaccgtcagc ggtgcagagg gaagcaagat gaacgtgcta
    13321 ctggaaccct tcagctatga atatatgctc aatgcgatgt gggtctcggc aatggtcggc
    13381 ggtctctgcg ctttcctgtc atgctatctg atgctaaaag gctggtcgct gattggcgat
    13441 gcgctgtcgc actctattgt cccgggtgtt gcgggggcat atatgctggg gcttccgttt
    13501 tctctgggag ccttcttttc cggcggactg gcagcgggca gcatgctgtt tcttaaccaa
    13561 cgcacccgct taaaagaaga tgccatcatc ggcctgatct tctcgtcctt ttttggcctg
    13621 gggctgttta tggtgtcatt gaacccgaca tccgtgaaca ttcagaccat cgtcctgggc
    13681 aatattctgg caatcgatcc ggcggatatc ctgcaactca ctatcattgg cattctctcg
    13741 atcatcgtgc tttttttcaa atggaaagat cttatggtga cctttttcga cgagaatcac
    13801 gcccgtgcta ttggattaca tccgggcaga ttaaaaatcc tcttcttcac cctgctgtcg
    13861 gtttcgaccg ttgcggcgct gcaaacggtt ggtgcctttc tggtgatctg tctggtggtg
    13921 actcccggtg caacagcatg gttgttaacc gatcgttttc cccgcctgct cataattgct
    13981 gtaactattg gcagtgtaac cagtttcctc ggcgcgtggg tcagttactt tctggacggc
    14041 gcgacaggtg gaatcatcgt ggtggcgcag acactgctgt ttcttttagc atttgtattt
    14101 gcgcccaccc atggactttt ggcaaatcgt cggcgtgcgc ataaagcgct ggaggatcgc
    14161 tcatgatggc attattactg gagccactgc agttcacctt tatgagtcac gcactgctga
    14221 tttcactggt agtttccata ccctgtgcgc tgctgtcggt ctttctggtc ctgaaaggtt
    14281 gggcactgat gggtgacgcg atgagtcatg cggtttttcc tggcatcgtg cttacctgga
    14341 ttctggggtt acctctggct acaggggcat tcgtcgccgg agtattctgc gcggtggcga
    14401 cgggatacct gaaagacaac agccgaatca agcaagatac agttatgggg attgtttttt
    14461 ctggcatgtt tgccgcaggt ctgatcttgt atattgcaat caaaccagac gtacatcttg
    14521 accatattct tttcggcgac atgctcggga taaccatcgg cgatataatc cagacggtga
    14581 ttattgccgg gctggttaca cttgttatta gcgtaaaatg gcgggatttt ttgctgttca
    14641 gctttgatta tcaacaggcg caggtaagcg gtttgcatac gagatggctg cattatgggc
    14701 tgctgtgcat ggtttccctg accattgtgg cgacgctgaa agcagtaggt atcattctct
    14761 ctatttctct gctcattgcg cctggcgcca ttgcagtact cctgacacaa cgctttcata
    14821 ttgcgctcct actggcgact ggcatatcgg taatagtgtc aatgactggt gtctggctgt
    14881 ccttttttat cgacagcgca ccagctccga cgattgtcgt cttattcgcg gtcgtgttca
    14941 tcatgacgtt taccgttacc agcatcaacg cacgcacaaa gggaaacgcc catacacagg
    15001 atctgttatc acccaattag cacaatatcc gaggacagca tcgtccgcca gcgtccgcca
    15061 gcctacagaa gttcggaaag ccatggaagg tcgttgggag gaggtacgaa ttctatcatg
    15121 caaaaaatac gtaaaatcga taacgcctag aaatcattca atactcgcac tatcgaaagt
    15181 ttaccagcca accgcggcac gttcctgcat acgacgtgcc gcagcttctg ttattccacg
    15241 ataaaattcc taaccgaatt caaatccttc agactattca gctcttcctt cagctcccgc
    15301 tgacggcgat aaat
//
LOCUS       DADKRT010000101        14936 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.102, whole genome shotgun sequence.
ACCESSION   DADKRT010000101 DADKRT010000000
VERSION     DADKRT010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14936
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.102"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..450
                     /locus_tag="JQ356_002613"
     CDS             <1..450
                     /locus_tag="JQ356_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312811.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HAY4622659.1"
                     /translation="QEVNAALFKEYLPLLQQSEPTIKQPVRWKNALGELNANLDISIA
                     DPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRADKQISGMMT
                     LGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH"
     gene            complement(491..1423)
                     /locus_tag="JQ356_002614"
     CDS             complement(491..1423)
                     /locus_tag="JQ356_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY4622660.1"
                     /translation="MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVK
                     LLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICN
                     HRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRH
                     PERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIA
                     MALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYIN
                     DKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQDK"
     gene            complement(1543..1785)
                     /locus_tag="JQ356_002615"
     CDS             complement(1543..1785)
                     /locus_tag="JQ356_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622661.1"
                     /translation="MSVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDN
                     FVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPNN"
     gene            1787..4573
                     /gene="polA"
                     /locus_tag="JQ356_002616"
     CDS             1787..4573
                     /gene="polA"
                     /locus_tag="JQ356_002616"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HAY4622662.1"
                     /translation="MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
                     GPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL
                     DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA
                     PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNPLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL
                     EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL
                     LVEVGSGENWDQAH"
     gene            complement(4955..5587)
                     /locus_tag="JQ356_002617"
     CDS             complement(4955..5587)
                     /locus_tag="JQ356_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HAY4622663.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRHSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE"
     gene            6169..6678
                     /gene="yihI"
                     /locus_tag="JQ356_002618"
     CDS             6169..6678
                     /gene="yihI"
                     /locus_tag="JQ356_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HAY4622664.1"
                     /translation="MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGS
                     RAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELL
                     ETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
                     DMMRLLRGN"
     gene            6867..8240
                     /gene="hemN"
                     /locus_tag="JQ356_002619"
     CDS             6867..8240
                     /gene="hemN"
                     /locus_tag="JQ356_002619"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HAY4622665.1"
                     /translation="MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAG
                     RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
                     LTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     CYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQW
                     DLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARM
                     QQFSRVI"
     gene            complement(8430..8540)
                     /gene="yshB"
                     /locus_tag="JQ356_002620"
     CDS             complement(8430..8540)
                     /gene="yshB"
                     /locus_tag="JQ356_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HAY4622666.1"
                     /translation="MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS"
     gene            complement(8651..10060)
                     /gene="glnG"
                     /locus_tag="JQ356_002621"
     CDS             complement(8651..10060)
                     /gene="glnG"
                     /locus_tag="JQ356_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HAY4622667.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAE
                     STSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
                     LLGWGRNTLTRKLKELGME"
     gene            complement(10072..11121)
                     /gene="glnL"
                     /locus_tag="JQ356_002622"
     CDS             complement(10072..11121)
                     /gene="glnL"
                     /locus_tag="JQ356_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HAY4622668.1"
                     /translation="MATGTQPDAGQILNSLINSILLIDDNLEIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG
                     MILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
                     DPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNV
                     RLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            complement(11295..12704)
                     /gene="glnA"
                     /locus_tag="JQ356_002623"
     CDS             complement(11295..12704)
                     /gene="glnA"
                     /locus_tag="JQ356_002623"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HAY4622669.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWN
                     SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
                     KNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            13077..14900
                     /gene="typA"
                     /locus_tag="JQ356_002624"
     CDS             13077..14900
                     /gene="typA"
                     /locus_tag="JQ356_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HAY4622670.1"
                     /translation="MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAI
                     TGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDY"
BASE COUNT         3864 a         3745 c         3851 g         3476 t
ORIGIN      
        1 caagaagtga atgctgcatt gttcaaagag tatttaccgt tattacaaca aagtgagccg
       61 accattaaac aaccggtaag atggaagaac gcactcggcg aactaaatgc caatctggat
      121 atcagtattg ccgacccagc caaatcttca tcatccacaa acaaagatat caaatcgctc
      181 aattttgatg tgaagttacc gcttaatgtc gtcacagaaa ccgcaaaaca gcttaattta
      241 tctgaaggaa tggatgcgga aaaagcgcaa aagcgggctg ataaacaaat cagcgggatg
      301 atgaccttag gtcagatgtt tcagttaatc acgattgaca acaataccgc ctcgctgcaa
      361 ctgcgttata caccgggtaa agttgttttt aacggacagg agatgagcga agaagaattt
      421 atgtctcgtg ccggacgttt tgttcattaa aatactcact cgcctctgct cattcagagg
      481 cgagcaaaat ttacttgtcc tgccgctgtg atgacatcaa cgacgtcaga agtcggtctt
      541 tttcctgcca cagtgagttc agccattgct gaaaatggcg cttaaagctt ttgtcattga
      601 tgtagtcgcc atgtaactca tcggcaatag gctgtaaatc cacatgaacg acaattcgcg
      661 tcagtttacc gcttaacata tcgaagaacg gctgacggtt attgtccgga taacacagcg
      721 taacattaag cagtttatcg aattgtttac ccagtacatt tagcgccatc gcaatgcctg
      781 ccgcctttgg tggcaacaag ttttgaaaag tggagtgggt ttgctgatgt ttttcttgcg
      841 tgaaacggga gccttcaacg aaattgacaa tggtggtggg atgcaggcga aacttttcac
      901 aagaacgccg agtggtttca acatctttac cacgtcgctc cggatgacgt aataaataag
      961 cgcgggaata acgcttcata aacggcatat ccagcgccca gcacgccagg ccaagaaatg
     1021 gcacccaggc cagctgttgc ttgaggaaat atttattcat cggaatgtgc ttacgaaaca
     1081 gcacgcacag tacgacaata tctgcccaac tacggtggtt acaaataagc agataccagt
     1141 tcttcttact taacccttcc agcccgtgaa cttcccattg caggtgtggg ttcagatgca
     1201 gtaataccgc cagaccttca caccagcaat acatcataaa atcacaaaaa cgcgaaacct
     1261 ttcgccaaat gactggcaca ggtagcaata gttttacaat cccggcaatg atgatcggga
     1321 cggaacaaaa aatagtgacc aaaatggtca atacgatact cagcaaaagg gttatcgcag
     1381 cgagtattct cgtcataatg aatttattca aaaggttagc catagacagt gcgctaaaga
     1441 agcgcaaggc gcagatttta gcagaaaacg acccaaataa cggatgatcc ttaaggagaa
     1501 aaataattca tatctatcca cattagaaaa aatcccatta tctcaattat tagggatggc
     1561 tttattttta actacatgaa aaacaaagac aaacatcata ctgtaaaaag catgataata
     1621 aattaaaagc gatgtaaata atttatgcac aaagttatcc acatgacgat ttgcgagcga
     1681 tccagaagat ctacaaaaga ttttcacgaa aagcggtgaa aaactcatgt ttttatcctg
     1741 tctgtggcat cctttaccca taatctgata aacaggcacg gacattatgg ttcagatccc
     1801 ccaaaatcca cttatccttg tagatggttc atcttatctt tatcgcgcat atcacgcgtt
     1861 tcccccgctg actaacagcg caggcgagcc gaccggtgcg atgtatggtg tcctcaacat
     1921 gctgcgcagt ctgatcatgc aatataaacc gacgcatgca gcggtggtct ttgacgccaa
     1981 gggaaaaacc tttcgtgatg aactgtttga acattacaaa tcacatcgcc cgccaatgcc
     2041 ggacgatctg cgagcacaaa tcgaacctct gcacgcgatg gttaaagcga tgggactgcc
     2101 gctgctggcg gtttctggcg tagaagcgga cgacgttatc ggtactctgg cgcgcgaagc
     2161 cgaaaaagcc gggcgtccgg tgctgatcag cactggcgat aaagatatgg cgcagctggt
     2221 gactccaaat attacgctta tcaataccat gacgaatacc atcctcggac cggaagaggt
     2281 ggtgaataag tacggcgtgc cgccagaact gatcatcgat ttcctggcgc tgatgggtga
     2341 ctcctccgat aacatccctg gcgtaccggg cgtcggtgaa aaaaccgcgc aggcattgct
     2401 gcaaggtctg ggcgggctgg atacgctgta tgccgagcca gaaaaaattg ctgggttgag
     2461 cttccgtggc gcgaaaacaa tggcagcgaa gctcgagcaa aacaaagaag ttgcttatct
     2521 ctcataccag ctggcgacga ttaaaaccga cgttgaactg gagctgacct gtgaacaact
     2581 ggaagtgcag caaccggcag cggaagagtt gttggggctg ttcaaaaagt atgagttcaa
     2641 acgctggact gctgatgtcg aagcgggcaa atggttacag gccaaagggg caaaaccagc
     2701 cgcgaagccg caggaaacca gtgttgcaga cgaagcgcca gaagtgacgg caacggtgat
     2761 ttcttatgac aactacgtca ccatccttga tgaagaaaca ctgaaagcgt ggattgcgaa
     2821 gctggaaaaa gcgccggtat ttgcatttga taccgaaacc gacagccttg ataacatctc
     2881 tgctaacctg gtcgggcttt cttttgctat cgagccaggc gtagcggcat atattccggt
     2941 tgctcatgat tatcttgatg cgcccgatca aatctctcgc gagcgtgcac tcgagttgct
     3001 aaaaccgctg ctggaagatg aaaaggcgct gaaggtcggg caaaacctga aatacgatcg
     3061 cggtattctg gcgaattacg gcattgagct gcgtgggatt gcgtttgata ccatgctgga
     3121 gtcctacatt ctcaatagcg ttgccgggcg tcacgatatg gacagcctcg cggaacgttg
     3181 gttgaagcac aaaaccatca cttttgaaga gattgcgggt aaaggcaaaa atccactgac
     3241 ctttaaccag attgccctcg aagaggccgg acgttacgcc gccgaagatg ctgatgtcac
     3301 cttgcagttg catctgaaaa tgtggccgga cctgcaaaaa cacaaagggc cgttgaacgt
     3361 cttcgagaat atcgaaatgc cgctggtgcc ggtgctttca cgcattgaac gtaacggtgt
     3421 gaagatcgat ccgaaagtgc tgcacaatca ttctgaagag ctcaccttgc gtctggctga
     3481 gctggaaaag aaagcgcatg aaattgcagg tgaagaattt aacctttctt ccaccaagca
     3541 gttgcaaacc attctgtttg aaaaacaggg tattaaaccg ctgaagaaaa cgccgggtgg
     3601 cgcgccgtca acgtcggaag aggtactgga agaactggcg ctggactatc cgttgccaaa
     3661 agtgattctg gagtatcgtg gtctggcgaa gctgaaatcg acctacaccg acaagctgcc
     3721 gctgatgatc aacccgaaaa ccgggcgtgt gcatacctct tatcaccagg cagtaactgc
     3781 aacgggacgt ttatcgtcaa ccgatcctaa cctgcaaaac attccggtgc gtaacgaaga
     3841 aggtcgtcgt atccgccagg cgtttattgc gccagaggat tatgtgattg tctcagcgga
     3901 ctactcgcag attgaactgc gcattatggc gcatctttcg cgtgacaaag gcttgctgac
     3961 cgcattcgcg gaaggaaaag atatccaccg ggcaacggcg gcagaagtgt ttggtttgcc
     4021 actggaaaca gtcaccagcg agcaacgccg tagcgcgaaa gcgatcaact ttggtctgat
     4081 ttatggcatg agtgctttcg gtctggcgcg gcaattgaac attccacgta aagaagcgca
     4141 gaagtacatg gacctttact tcgaacgcta ccctggcgtg ctggagtata tggaacgcac
     4201 ccgtgctcag gcgaaagagc agggctacgt tgaaacgctg gacggacgcc gtctgtatct
     4261 gccggatatc aaatccagca atggtgctcg tcgtgcagcg gctgaacgtg cagccattaa
     4321 cgcgccaatg cagggaaccg ccgccgacat tatcaaacgg gcgatgattg ccgttgatgc
     4381 gtggttacag gctgagcaac cgcgtgtacg tatgatcatg caggtacacg atgaactggt
     4441 atttgaagtt cataaagatg atgttgatgc cgtcgcgaag cagattcatc aactgatgga
     4501 aaactgtacc cgtctggatg tgccgttgct ggtggaagtg gggagtggcg aaaactggga
     4561 tcaggcgcac taagattcgc ctgaacatgc ccttttttcg taagtaagca acataagctg
     4621 tcacgttttg tgatggctat tagaaattcc tatgcaacaa ctgaaaaaaa attacaaaaa
     4681 gtgctttctg aactgaacaa aaaagagtaa agttagtcgc gtagggtaca gaggtaagat
     4741 gttctatctt tcagaccttt tacttcacgt aatcggattt ggctgaatat tttagccgcc
     4801 ccagtcagta atgactgggg cgttttttat tgggcgaaag aaaagatccg taatgcctga
     4861 tgcgctatgt ttatcaggcc aacggtagaa ttgtaatcta ttgaatttac gggccggata
     4921 cgccacatcc ggcacaagca ttaaggcaag aaaattattc gccgtcctgc gtttcttcta
     4981 caggctgcat ctcgctaaac caggtatcca gtttctgccg cagcttgtcc acgccttgtt
     5041 tcttcaacga agaaaacgtt tcaacctgca catcaccgtt aaacgccagt acagcttcac
     5101 gcaccatatt caattgcgct ttacgtgcgc cgcttgccag tttgtccgct ttggtcagca
     5161 gcaccagaac ggcgatattg ctgtctaccg cccactcaat catctgctga tccaaatctt
     5221 tcagcggatg gcgaatatcc attagcacca ccagaccttg caggctatga cgtttttcga
     5281 ggtattcgcc gagcgcacgc tgccatttgc gcttcatctc ttccgggact tccgcataac
     5341 cgtacccagg caagtcaacc agacgcttgc cgtcagccac ttcaaacagg ttgataagct
     5401 gggtgcgccc tggggttttt gaggtacgag ccaggctttt ctggttagtc agcgtgttca
     5461 gcgcgctgga tttacctgcg ttggaacggc ctgcaaaagc cacttcaatt ccggtatcgg
     5521 aaggtaggtg gcgaatatca ggcgcactca tcacaaaatg cgtctgttga taattcaaat
     5581 tagtcaaagc ggtcgtctcc gtcagtcaaa gctttgtggc gattatacct gaaccataat
     5641 aaaaggcgga tttttcggcg tgagcgttgt aagtaaaaac catacgcttt gtgagacatt
     5701 gccgatagtc tttatgcgaa atagcagaga aaattctgcg atgcatgtca aataagctat
     5761 ataaatcagt gaattgcttt tatataaaac tctgaaaatg tgcaaatact gatggcggtt
     5821 gattgtttgt ttaaagcgaa ggcgtaaagt agcacccata gagcgaggac gctaacagga
     5881 acaatgactc aggatgaggg tcaggagcgc caggaggcga agacagagga ttgtcaggaa
     5941 gacaaacgtc cggagacgta attaaacgga aatggaatca acacggattg ttccggctaa
     6001 aggaaaaaca gggtgtgttg gcggcctgca aggattgtaa gacccgttaa gggttatgag
     6061 tcaggaaaaa aggcgacaga gtaatctgtc gccttttttc tttgcttgct ttctgttaga
     6121 ttccgccgca aatcgatact gaataaaacg gctaaaagac gaaccattat gaaaccatca
     6181 tcttcaaact cacgcagcaa aggtcatgca aaagcgcgtc gaaaaacacg cgaggagctg
     6241 gatcaggaag ctcgtgatcg caagcgtcag aaaaaacgtc gtggtcatgc gccgggcagc
     6301 cgcgcagcgg gcggaaacac cacgtcaggc agcaaaggcc agaacgcacc aaaagatcca
     6361 cgtattggca gtaaaacccc tattccattg ggcgtgactg aaaaagtcac caaacagcac
     6421 aaaccgaaga gtgagaaacc tatgctttca ccgcaggcgg agttggaatt actggaaacg
     6481 gatgagcgtc tggatgcgct gctggaacgt ctggaagcag gcgaaaccct gagtgccgaa
     6541 gagcaatcct gggtggatgc taaactggat cgtattgatg agttgatgca gaaactcggc
     6601 ctctcttatg acgatgacga agaagaggaa gaagacgaga agcaagaaga catgatgcgt
     6661 ctgctgcggg gcaactaacg gattgccgcc gtgggccttc ccgttctgct gataaccctt
     6721 ccggttatat gttatctggt gtggttattc gttaaactac agcggttgtc gcggcgacaa
     6781 aagtggctgc gcaaccggct gatgacccga aacgggcatc cgccggtacg ccgtagccgc
     6841 cagagacgcc atcggaagga gtgagcatgt ctgtacagca aatcgactgg gatctggccc
     6901 tgatccagaa atataactat tccgggccac gatacacctc gtacccgacc gcgctggagt
     6961 tttcagaaga cttcggcgaa caggcgtttt tacaagccgt ggcgcgctat cctgagcgtc
     7021 cattatctct ctacgtacat atcccgttct gccataagct ttgttacttc tgcggttgca
     7081 ataagattgt tactcgccag cagcacaagg ccgatcagta tctggacgcg ctggagcaag
     7141 aaatcgtcca tcgtgcaccg ctgttcgccg ggcgtcacgt cagccaattg cactggggcg
     7201 gcggaacgcc gacgtatctg aataaagcgc aaatcagccg cctgatgaag ctgctgcgcg
     7261 aaaacttcca gttcaatgcc gatgcggaga tttcgatcga agtcgatccg cgggaaatcg
     7321 aactggatgt actcgatcat ttacgcgccg aaggctttaa tcgcctgagc atgggcgtgc
     7381 aggacttcaa caaagaagtg caacgtctgg ttaaccgcga gcaggatgaa gagttcatct
     7441 ttgcactgct taaccatgcg cgtgagattg gttttacctc caccaacatc gacctgattt
     7501 acggcctgcc gaaacagacg ccggagagtt tcgcctttac cctgaaacgt gtggcggagc
     7561 tgaaccccga tcgtctgagt gtctttaact acgcgcatct gccgaccatt tttgctgctc
     7621 agcgcaaaat caaagatgct gacctgccga gtccgcagca aaaactcgat atcctgcagg
     7681 aaaccatcgc cttcctgacg caatcgggct atcagtttat cggtatggat cactttgccc
     7741 gtccggatga cgagctggcg gtggcccagc gtgaaggcgt gctgcatcgt aacttccagg
     7801 gctacaccac tcagggcgat accgatctgc tggggatggg cgtttccgcc atcagcatga
     7861 ttggcgactg ctacgcgcag aaccagaaag agttgaagca gtactatcag caagtggatg
     7921 aacaaggcaa tgcgctgtgg cgtggtattg cgctaacgcg tgatgactgt attcgccgcg
     7981 atgtgattaa gtcgctcatc tgcaacttcc gtctggatta cgcccctatt gagaaacagt
     8041 gggatttgca cttcgctgat tactttgcgg aagatctcaa gctgctcgcc ccgttagcaa
     8101 aagatgggct ggtggatgtg gatgagaagg gaatacaggt gacggcgaaa ggtcgcttgc
     8161 tgatccgcaa catttgcatg tgctttgata cctatctgcg ccagaaagcg cggatgcagc
     8221 agttctcacg ggtgatttga atagtgaatg gcgcttcgtt tacaaagtag aaaacgaaag
     8281 cgccatcaat gtgctgagaa caagattgcc tgatgcgcta cgcttatcag gcctacaaaa
     8341 cctgttgaaa atattgcttt tgtaggccgg ataaggcgtt cacgccgcat ccggcatgaa
     8401 caaagagcac ttcatcagca atctgaaact caactaaaca gcccaatcat tgcggcacac
     8461 agcacggcag caacggcagt ttgcggtgtg tggctgtcaa ctgcgccact cgataccaga
     8521 ttaattattg attccagcat aatgactctc cccgttttcc gggcagatca tactgaactt
     8581 atcggaacag taaagcgtaa aataccagca atttgcgctc aataatcaat ctttacacac
     8641 aagctgtgaa tcactccatc cccagctctt ttaacttacg cgtcagggtg ttgcggcccc
     8701 agccgagtag ccgcgccgct tcctgtttat gcccctgcgt atgtcgcaac gcggtcgtca
     8761 gtaacgtccg ctccagctct ggctgcgctt cggaaagcag attttgatga ccggaacgca
     8821 gcgctctgtc tgcccactgc gcaagaagcg tcgcccagct gtccggttgc atttgcgaag
     8881 tactctccgc aaccgttgat tcaaacagtt cgccgggcaa atcctgaatc aacacttcct
     8941 gcccggcggc catcaccgtt agccagcggc aggtgttttc cagctggcgc acgttgcctg
     9001 gccacgccag acgcgtcaga gcagcttcgg tttccggatg cagtaacttc gcttctacgc
     9061 ccagttcgcg cgcggcaacc tgtaaaaaat ggcgcgccag acggggaata tcttcccgac
     9121 gttcgcgcag cggcggcaga tgaacgcgga taacgtttag gcggtggaac agatcctcac
     9181 ggaacttacc ttcctgcact cgctgttcga gattctggtg agtggcagcg ataatccgca
     9241 catccacttt caccggcgca tagccgccaa cgcggtaaaa ctgaccgtct gccagcacgc
     9301 gcagcaaacg cgtctgcaca tccagcggca tatcaccaat ttcgtcgagg aataatgtac
     9361 cgccatcggc ctgttcaaaa cgcccctgac gaatggtatt cgcgccagta aacgcgcctt
     9421 tctcgtggcc aaacagttct gattcgatca aatcttttgg gatagctgcc atattcagcg
     9481 cgataaacgg tgctttggcg cgcggactgt ggcgatgcag ggcatgagcg accagttctt
     9541 taccggtgcc ggattcgccg ttaatcagca cgctaataga agaacgcgaa agccgaccga
     9601 taatacggaa cacgtcctgc atggctggcg cttcgccgat gatatcggtc gttgggccgt
     9661 taagctgaat attacgcggc tgctgctgtt cctggtaatg actgatagcg cgctcaacca
     9721 gcgccacggc ttcgtcgata tcaaacggtt tgggcagata atcaaacgcc ccttgttgat
     9781 aggcgctgac ggcagcatcc agatcggaat gtgcggtcat aatgatgacc ggaagcattg
     9841 gatggcgctg tttaatctgc ttgagcagcg ccagcccgtc cattcccggc atacggatat
     9901 ctgaaagcag cacatccggc gttttgctcg ccagcgcctc cagtacttcc gcgccgttct
     9961 caaatgtcgt acaggttaaa cccgctccag cgagcgcacg ttcaagcacc caacggatgg
    10021 aactatcgtc atcgactacc cagactatcc ctcgttgcat aaacgtcacc tttatttcct
    10081 gataggcagg taaaccgaga actcggtatg acctggccaa ctggtaaatt caattttgcc
    10141 tgaatgctga tcaatcaaat tacgggcgat ggataagcca agcccggtgc caccttcgcg
    10201 gccgctgacc atcgggtaaa acagcgtatc ctgcaaatga ggcggaatgc ccggcccgtt
    10261 atcttccaca tcaatccgcg ccgccagccg gtagcgctcg ccgtgtaagg tcagttgaaa
    10321 cgcggtgcgg gtacgcagaa tgatttcacc gccttccggc cccagcgcct gtagcgcatt
    10381 gcgcacaata ttcagcaaga cctgttcaat ttgatccggg tcgtgcgcca gttccggcag
    10441 gctgggatcg taatcacgaa tcaaccgcac gttgtccggc agttccatcg acaccagcgt
    10501 taccacgcgt tcagccactt tgtgaatact ttcggtaacg cgcgtaccgg gcagctgcgg
    10561 ccccaacaga cggtcgacca gatttcgcag ccggtccgcc tgttcgataa tcactttggt
    10621 atattcgagt agtgatgggt caggtaacgc tttgctgagc agctgcgccg cgccacgtaa
    10681 accgccaagc ggatttttaa tctcatgtgc caggccgcgc actaaatcac gggcagcaac
    10741 ctgctgggcg tgctgtagct gttcctgact taagcggcgc tggttatcca tcggagccat
    10801 ctccagcagg atcatgccgt ccggcatacg ctgggccgtc acagaaagga tatgcgagcg
    10861 cccgtcgatg accagcgtca cttcgttatc ggtaaaacct tgccccgcct ccagactttc
    10921 ttgcatcagc tcgatattta atgagaagta gctcaacagt tccggtaacg gtgtaccaaa
    10981 caatttgcgg gagctttggg cgagcagttg ttgcgcggca gggttggcgt aatggatctc
    11041 caggttgtca tcgattaaca aaatactgtt aatcagcgag ttgaggatct gcccagcatc
    11101 gggctgcgtg cctgttgcca taaagcagtc tcctgaacag gttgcaccat tttagtgcat
    11161 tatagctttt tacggataaa aagcgcgaag catcagagaa ttgacggaga aaaaagccca
    11221 tgcagagatg ggctgaaagt ttccacggca actaaatccc ggcgttgttg cgccgggtag
    11281 tacaacttca actattagac gctgtagtac agctcaaact ctaccggatg cggagtcata
    11341 cgcacgcggt catcttcttc gcgacgcaga gcgatgtacg catcaattgc ttcgtcagtg
    11401 aacacgccac cggctttcag gaactcgcgg tccagatcca gttcgttcag tgcttcttcc
    11461 agagagcctg caacctgtgg gatctctttc gcttcttctg gcggcaggtc atacaggttt
    11521 ttgtccatgg cttcacccgg atggatcttg ttcttgatac catcaagacc ggccatcagc
    11581 agggcagcaa agcacaggta cgggttagct gccggatccg ggaaacgtac ttcgatacga
    11641 cgtgctttcg gagaagaaac caccggaata cggatagacg cagaacggtt acgcgcagag
    11701 taagccagca ttaccggtgc ttcatagccc gggaccagac gcttataaga gttggtggtc
    11761 gggtttgcca gggcgttaat cgctttagcg tgtttgatta cgccgccaat gtagtacagc
    11821 gcctgctcag acagacctgc gtatttgtcg cctgcgaaca ggttaacgcc gtttttagac
    11881 agagacatgt ggcagtgcat accggagccg ttatcaccga acatcggttt tggcataaag
    11941 gtcgcggttt taccgaagcg gtgcgctacg ttgtgcacaa catatttgta gatctgaatt
    12001 tcgtcagctt ttttggtcat ggtattgaag cgggtagcca cttcgttctg accagcagtc
    12061 gctacttcgt ggtgatgggc ttcaaccacc agccccatct gttccatcac cagacacatt
    12121 tcagaacgaa tatcctgagc cgagtctacc ggtggaaccg ggaagtaacc gcctttcact
    12181 gccggacggt gacctttgtt accaccttcg tattgggtgg aggagttcca tgcgccttcg
    12241 atatcgtcga tagcaacgtg ggaaccggag atagatgatc cgaaacggat gtcatcgaac
    12301 aggaagaatt caggttctgg cccgaacagt acggtgtcgg caatgccagt ggaacgcagg
    12361 taatcttcgg cgcgcttcgc aatggagcgc gggtcacggt catagccttg cagggtgcca
    12421 ggttcaagga tgtcgcaacg gataatcagg gtggagtcgg cgaagaacgg gtcaatcact
    12481 gcggtggatg cgtctggcat cagcaccatg tcggactcgt taatgccttt ccagccgcca
    12541 atcgaggagc cgtcaaacat tttgccttct tcgaagaatt cagcattcac ctgatgagca
    12601 gggatagtga cgtgctgttc tttaccttta gtatcggtga agcgcaaatc aacaaacttc
    12661 acttcgtgct cgttcagcat cgtcagtacg tgttcagcgg acatacttta actctcctgg
    12721 attggtcatg gtcgtcgtgg taacgaaatc tgcaattatt ttggccgtgt cgccgtaaaa
    12781 aagataaagc gaaatctgtg ccaactttta aattgcccct aaaaggcgtt atcatgcgca
    12841 ccatcgtgca aaagggctgc accacgatgt gaatgttgca ccaatatagt gcttcaatgg
    12901 aaacattaag caccatgttg gtgcaatgac ctttggataa ccctttttat gctccgtgaa
    12961 agcgatcaca aagggactct gcaatacttg tttgcggagg atgtttgtga tcctgttttg
    13021 tagtgcgatt aatccgtgta caataacgcg ctatttctaa tgcctgaggc aaagttgtga
    13081 tcgaaaaatt gcgtaatatc gccatcatcg cgcacgtaga ccatggtaaa accaccctgg
    13141 tagacaagct gctccaacaa tccggtacgt tcgactctcg tgccgaaacc caagagcgcg
    13201 tgatggactc caacgatttg gagaaagagc gtgggattac catcctcgcg aaaaacaccg
    13261 ctatcaaatg gaatgattac cgtatcaaca tcgttgatac cccggggcac gccgacttcg
    13321 gtggtgaagt tgaacgtgta atgtccatgg tagactcagt gctgctggtg gttgacgcat
    13381 ttgacggccc gatgccgcaa acgcgcttcg taaccaaaaa agcgtttgct tacggcctga
    13441 agccgattgt tgttatcaac aaagttgacc gccctggcgc gcgtcctgat tgggttgtgg
    13501 atcaggtatt cgatctgttc gttaacctcg acgcgaccga cgagcagctg gacttcccga
    13561 tcgtttacgc ttctgcgctg aacggtatcg cgggtctgga ccacgaagat atggcggaag
    13621 acatgacccc gctgtaccag gcgattgttg accacgttcc tgcgccggac gttgaccttg
    13681 acggtccgtt ccagatgcag atttctcagc tcgattacaa cagctatgtt ggcgttatcg
    13741 gcattggccg catcaagcgc ggtaaagtga agccgaacca gcaggtcact atcatcgata
    13801 gcgaaggcaa aacccgcaac gcgaaagtcg gtaaagtgct gggccacctc ggtctggaac
    13861 gtatcgaaac cgacctggcg gaagctggcg atatcgttgc gatcacgggc cttggcgaac
    13921 tgaacatttc tgacaccgtt tgcgacacgc aaaacgttga agcgctgccg gcactctccg
    13981 ttgatgagcc gactgtttct atgttcttct gcgttaacac ctcgccgttc tgcggtaaag
    14041 aaggtaagtt cgtaacgtct cgtcagatcc tggatcgtct gaacaaagaa ctggtacaca
    14101 acgttgcgct gcgcgtagaa gaaaccgaag acgctgatgc gttccgcgtt tctggtcgtg
    14161 gcgaactaca cctgtctgtt ctgatcgaaa acatgcgtcg tgaaggtttc gaactggcgg
    14221 tatcccgtcc gaaagttatc ttccgtgaaa tcgacggtcg taaacaagag ccatatgaaa
    14281 acgtgactct ggacgttgaa gaacagcatc agggttctgt aatgcaggcg ctgggcgaac
    14341 gtaaaggcga cctgaaaaac atgaatccag acggtaaagg ccgcgtacgt ctcgactacg
    14401 tgatcccaag ccgtggtctg attggcttcc gttctgagtt catgaccatg acttccggta
    14461 ctggtctgct gtactccacc ttcagccact acgacgacgt acgtccgggt gaagtgggtc
    14521 agcgtcagaa cggcgtactg atctctaacg gtcagggtaa agcggtcgcg ttcgcgctgt
    14581 tcggtctgca ggatcgcggt aagctgttcc tcggtcacgg tgcagaagtt tacgaaggtc
    14641 agattatcgg tattcatagc cgctctaacg acctgactgt aaactgcctg accggtaaga
    14701 aactgaccaa catgcgtgct tccggtactg acgaagccgt tgttctggtt ccgcctatcc
    14761 gcatgactct ggaacaagct ctggagttca tcgatgatga cgaactggta gaagtgactc
    14821 cgacctctat ccgtattcgt aaacgtcacc tgacggaaaa cgatcgtcgt cgcgccaacc
    14881 gcgcaccgaa agactattaa tttcgttttt tagttataaa aaacctgcca tcgctg
//
LOCUS       DADKRT010000102        14734 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.103, whole genome shotgun sequence.
ACCESSION   DADKRT010000102 DADKRT010000000
VERSION     DADKRT010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14734
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.103"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            286..942
                     /locus_tag="JQ356_002625"
                     /pseudo
     CDS             286..942
                     /locus_tag="JQ356_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000082157.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(1036..1767)
                     /locus_tag="JQ356_002626"
     CDS             complement(1036..1767)
                     /locus_tag="JQ356_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001075464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus Gp2 family protein"
                     /protein_id="HAY4622671.1"
                     /translation="MNQPIHNAYWLSRFESILNSALVQHRAVSLIRVDLRFPEYMPVT
                     IMDPDPDSAVISRFFASLKAKIQAYQRHKRRANKRVRATTLRYFWCREFGKEKGRKHY
                     HVILLLNKDTWCSPGDFTVPSSLATLIKLAWCSALHLEPWQGNGLVHFSRRTPFRKPT
                     SSDARPSSDDTPLSGGCSDTRKASDKKSGGSAVLWVKRGDVEAMQKAMERACYLVKYE
                     TKQHDGSGQRNYGCSRGPGRLLDGR"
     gene            complement(3286..4416)
                     /locus_tag="JQ356_002627"
     CDS             complement(3286..4416)
                     /locus_tag="JQ356_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000147750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622672.1"
                     /translation="MTGRKNKCVRKNCNNQVFSVKMAVEKRLCRKHYERFCELKKRRE
                     QNPVHRLNEALPRKIKGPKSKKKLVKEREIINSRKKHKQEQGPSLTELNKKVREILKT
                     PAWRTLETRIRRNGITFKSKAELDALSELYAIYSWVSYCKRGDNYSVWFLNCPDVNIN
                     LHVCECRSSESDCYLPSRFIILPAPLRQKVKRKYSANSSGALGHNDSKSLYKTVLSVC
                     GGKRETEMFFYSLPVKTNHHPYWIKSGVVKRFPPVFGLLFYEQERLTGGVFRYVLIRF
                     YNAFKENLFFVEIVSCCFLVEFFHDIDSFFINQRLSKLGSFIDKWREGKEIWIKVYLQ
                     LIHTTLGITETEKLVNLYNSFFTDKVVLWDESVKKVKWIYEK"
     gene            4601..5485
                     /locus_tag="JQ356_002628"
     CDS             4601..5485
                     /locus_tag="JQ356_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HAY4622673.1"
                     /translation="MSFSHSSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIM
                     GKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLTLQLGERRMTLVDLPGIGETPQH
                     DQEYRELYRQLLPELDLIIWILRADERAYAADIAMHQFLLNEGADPSRFLFVLSHADR
                     VFPAEEWNDTEKCPSRQQELSLATVTARVATLFPSSFPVLPVAAPVGWNLPAFVSLMI
                     HALPPQATSAVYSHIRGENRSEQARKHAQQTFGDAIGKSFDAAITRFSFPAWILQLLR
                     KTRDRIIHLLVTLWDHLF"
     gene            5604..6281
                     /locus_tag="JQ356_002629"
     CDS             5604..6281
                     /locus_tag="JQ356_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001097314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622674.1"
                     /translation="MNTRILFPLLFTVASFSASAGNWAVKNGWCQTMTEDGQALVMLK
                     NGTIGITGLMQGCPNGVQTLLGSRISINGNLIPTSQMCNQQTGFRAVEVEIGQAPEMV
                     KKAVHSIAERDVSVLQAFGVRMEFTRGDMLKVCPKFVTSLAGFSPKQTTTINKDSVLQ
                     AARQAYARKYDEETTETADFGSYEVKGNKVEFEVFNPEDRAYDKVIVTVGADGNATGA
                     SVEFIGK"
     gene            6287..6520
                     /locus_tag="JQ356_002630"
     CDS             6287..6520
                     /locus_tag="JQ356_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 domain-containing protein"
                     /protein_id="HAY4622675.1"
                     /translation="MSDCHPVLLPEGPFSREQAMAVTTAYRNVLIEDDQGTHFRLVIR
                     NAEGQLRWRCWNFEPDAGKQLNPYLASEGILRQ"
     gene            6610..7428
                     /locus_tag="JQ356_002631"
     CDS             6610..7428
                     /locus_tag="JQ356_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HAY4622676.1"
                     /translation="MQLASRFGHVNQIRRERPLTREELMYHVPSIFGEDRHTSRSEQY
                     AYIPTITVLENLQREGFQPFFACQTRVRDQSRRGYTKHMLRLRRDGEINGQHVPEIIL
                     LNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
                     RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDKHQPVTTADILTPRRREDYGKDLWS
                     AYQTIQENMLKGGISGRSAKGKRIHTRAIHNIDTDIKLNRALWVMAETLLENLR"
     gene            7505..7990
                     /locus_tag="JQ356_002632"
     CDS             7505..7990
                     /locus_tag="JQ356_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HAY4622677.1"
                     /translation="MTTSSHNSTTPSVSVTAASGNNPPQLVATPVPDEQRISFWPQHF
                     GLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNV
                     MNGNRAEMSPEAAGIAACLMAYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII
                     D"
     gene            8006..8482
                     /locus_tag="JQ356_002633"
     CDS             8006..8482
                     /locus_tag="JQ356_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HAY4622678.1"
                     /translation="MQQLSFLPGEMTPGERSLILRALKTLDRHLHEPGVAFTSTHAAR
                     EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA
                     VILAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL"
     gene            8551..8772
                     /locus_tag="JQ356_002634"
     CDS             8551..8772
                     /locus_tag="JQ356_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF987 domain-containing protein"
                     /protein_id="HAY4622679.1"
                     /translation="MKIITRGEAMRIHRQHPASRLFPFCTGKYRWHGSAEAYTGREVQ
                     DIPGVLAVFAERRKDSFGPYVRLMSVTLN"
     gene            8791..9435
                     /locus_tag="JQ356_002635"
     CDS             8791..9435
                     /locus_tag="JQ356_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000086762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin of toxin-antitoxin stability system"
                     /protein_id="HAY4622680.1"
                     /translation="MSRIITTTVYTLNELSSTAREKARDEYRQHHADSNWYENVYEDF
                     REVCDIFGIDLRQRVIRLSNGRFMEEPCIWFSGFCSQGDGACFEGLWHWQPAAPRKIR
                     EYAPQDRELHRIADALQAVQKRNFWQLQAEISHRGRYCHPYSMDITVTRNSPTGQVMT
                     TDAEAAVSEVLRDLAFWLYRQLENEYDWLTSDAAVDEALLINEYTFTEAGLRAG"
     gene            9485..9853
                     /locus_tag="JQ356_002636"
     CDS             9485..9853
                     /locus_tag="JQ356_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001285113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system YeeU family
                     antitoxin"
                     /protein_id="HAY4622681.1"
                     /translation="MSDSLHETNYPDDNNDRPWWGLPCTVTPCFGARLVQEGNRLHYL
                     ADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSGELSPRHQHTVTLYARGLTCEAD
                     TLGSCGYVYLAVYPTSETKT"
     gene            9943..10320
                     /locus_tag="JQ356_002637"
     CDS             9943..10320
                     /locus_tag="JQ356_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001757701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HAY4622682.1"
                     /translation="MKTLPDTHVREASRCPSPVTIWQILLSRLLDQHYGLTLNDTPFA
                     DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATG
                     LMARDNYRTVNNITLGKHPGAKQ"
     gene            10317..10805
                     /locus_tag="JQ356_002638"
     CDS             10317..10805
                     /locus_tag="JQ356_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622683.1"
                     /translation="MKLALTLEADSINVQALNMGRIVVDVDGVTLAELINVVCDNGYS
                     LRVVDESDRTSAERTPPSAALTGIRCSTAHITAKDNAWLYSLSHQTNDFGESEWIHFT
                     GSGYLLRTDAWSYPVLRLKRLGLSKTFRRLIVTLIRHYGVSLIHLDACAECLPGLPTF
                     DW"
     gene            10823..11020
                     /locus_tag="JQ356_002639"
     CDS             10823..11020
                     /locus_tag="JQ356_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF957 domain-containing protein"
                     /protein_id="HAY4622684.1"
                     /translation="MKSLTTETALDILIAWLQDNIDCESGIIFDNDEDRTDSAALLPC
                     IEQAREDIRTLRQLQLLQQNR"
     gene            11105..11950
                     /locus_tag="JQ356_002640"
     CDS             11105..11950
                     /locus_tag="JQ356_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001440175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
                     /protein_id="HAY4622685.1"
                     /translation="MSDITASRPEVVTGHTDVICSTSIRHILAVRKSTLLQIDTLIRQ
                     LAEISAMTESIGGKTARDWAMKQDFRCGCWLMEKPETAMKAITRNLDRELWRDLMQRS
                     GMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVLNVFRGLS
                     WNYKTNSPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNR
                     ENITIRLDDHIQSVQGKEDYEDEMFSIRYFKKGSAHITFRKPELVDRLNDIIAKYYPN
                     VLTER"
     gene            12019..12414
                     /locus_tag="JQ356_002641"
     CDS             12019..12414
                     /locus_tag="JQ356_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000208382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin domain-containing protein"
                     /protein_id="HAY4622686.1"
                     /translation="MTTKDRIQSRLNRSKRYVFTRDDFRDIAGYDQVGRALRTLVNEG
                     KLMKVGYGVYTKARRNVITGKIMPAAPGGSAAVITEALDRLNIRYSLIGATECYNKGQ
                     STQIPVSPEFKTPPRFKRVLVVGKSKINA"
     gene            12407..13354
                     /locus_tag="JQ356_002642"
     CDS             12407..13354
                     /locus_tag="JQ356_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001536504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HAY4622687.1"
                     /translation="MPELTSLFPDVANALDIESVAIVEKDYFVVNLLKLLKEIKPETH
                     TLVFAGGTALSKAGISLNRMSEDIDIKLVPTENFMQNGRNRKRKIRKEIVQIITDVLH
                     NSDIFSLDNENARITRDEYRYNEIPVRYPQTFAQAPCLRPFIKLELMETTLLEHPESR
                     DIYSLVTELTGNGTPVTAFPCATILSTQAEKLISMMRRTAILLRNPEQQDDESLVRHI
                     YDNYCIVREKGVNVPVLKNFVQICIQQDIERYGNQHPQFRNSPVDELKKGLDALRDDP
                     VHKLRFQRFVKPMVFGNTQIDWEEAYSCFRQTALSVLTN"
     gene            13758..>14734
                     /locus_tag="JQ356_002643"
     CDS             13758..>14734
                     /locus_tag="JQ356_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY4622688.1"
                     /translation="MALTDAKIRAAKPTDKAYKLTDGTGMFLLVHPNGSRYWRLRYRI
                     LGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIA
                     RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEI
                     ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGS
                     YKGQTVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGS
                     KMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNAS"
BASE COUNT         4048 a         3765 c         3303 g         3618 t
ORIGIN      
        1 aaaagcaaaa cgacatggag gtgcctcaga agtctggcac cacagcaaca aacgatgggg
       61 catgaaacac agggaacatt gcgcccctga gcgttgagga tcttccacct tgtatcctgg
      121 ttcttcgtta tcatgagcag cgaacagatt tggcaaagcg tatgcagcct ggtgcccctt
      181 agggtttaag cccatatgta agcaaatggc gcatacgctg agccactcat ctgaaacccg
      241 aacagttgtc cgtactccat aacgcattag caagaatggg caataatgag tctgccaaat
      301 ccactttgtg ttgataccaa tgtgtccaaa acaacgctgg atattgccgc cagcaacact
      361 attgaacggt tttctgttgc cagtggtgct gacggcgttg atttcatcat cgctgaactg
      421 aggcagcacg atatggcctt tgtgttgatg gaaggccgcc ataacctgtg cgtttcagcc
      481 cgaaggtttt gagatcgccg tagttaaccc caggcaagct cgtgactttg cccgtgcgat
      541 gggatatctg gcgaagactg acccgcatga tgcgcgtttt ttttgcccag atggctgcag
      601 ttattaatta ccatccggaa cgagaccgct ttatccggac tttgccggat gcagaacgtc
      661 aggttcttaa tgccatagtc gtttgcagac accagttgat cgcaatgcca gttactgagc
      721 aaaacaggtt gtacccggct cacccgcaaa gcaaaaaaaa cattaatatc atcaaagcgc
      781 tggaagatga acacccacat ccggaaccat tttaaagaac cagctgagca cctgagcaac
      841 attaaaggca tcggcgtaat gactacggcg gtgctggtag cctgtatgcg caaactgctg
      901 accatcctga atgcgatact cagaaagaac aaagaaatgt aatgaatcct gccatcaggt
      961 tactccataa ttttgttggt caagacagtt aattacgtga cgtatgctca ggcaccggat
     1021 gccgttttac agggctcacc tgccatccag tagacgcccc ggcccacgac tgcaaccata
     1081 attacgttga ccagaaccgt catgctgctt cgtctcatac ttcacgagat aacaggctct
     1141 ctccatggct ttctgcatcg cttccacatc accacgcttg acccagagca cagcggatcc
     1201 accagatttt ttgtcagaag ctttccgggt atcagaacat ccacccgaca aaggcgtatc
     1261 atcggaagaa gggcgagcat cagatgatgt cggtttacgg aaaggcgtcc gcctggaaaa
     1321 atgaaccagt ccattaccct gccagggctc gagatgcaga gcactgcacc atgccagctt
     1381 gatcagcgtc gccagcgaag aaggaacggt gaaatcccct ggcgagcacc aggtatcttt
     1441 gttgagcagt aatatcacgt gataatgttt cctgcctttt tccttgccaa actcccgaca
     1501 ccagaaataa cgcagagtgg ttgcacgcac acgcttgttg gcacgtcgtt tatgtcgctg
     1561 gtaagcctga atttttgctt tcagggatgc gaaaaaacgg gagatcaccg cagagtccgg
     1621 atcgggatcc atgatggtga caggcatata ctcagggaaa cgtaaatcca cccggattaa
     1681 cgaaacggca cggtgttgca ccagggcact gttgagaata ctttcaaaac gggataacca
     1741 gtaagcattg tgtattggtt gattcatgat gagagatctc cattgatttg gattgacttc
     1801 acatcattaa tcaccgcggt aaaactttac gaactcccac cattgagcaa cacaacctac
     1861 tccggataaa aatggaatcc cctacaaacg aaaagatggt aaaaaaacac aacaacagca
     1921 aatgaattta aaaacggcat ggacgacgag aaaagtcaga agggaaacgg atcaacagaa
     1981 cgtgcaaaca aaacatcaaa aacgcaatca gaacgatttc tggcgctgtg aatcaacaac
     2041 aacaccaaaa cctatagctt aaccacacaa ctcaatcaca gagccgaata gcgcgtttaa
     2101 aacctgttta cagataaccc caccccaaga acaaaaacca ctaacatcag aatcgatttt
     2161 ctcatcctga aaatgttacg tttcactacg caccataaaa acgattaacc atcgataacg
     2221 taaacctcat ctgaatcaaa acaccagaac caatcatcac gctttttctg aaaagagcct
     2281 tgccctgaga aaaaaacacc agggccagtt aatcatctca tcaatctcat cgctacaaaa
     2341 tcatccataa aaccatttaa ctaaatcgtc gtaagcactc cgtaaatcac gccaggttat
     2401 tcagtcggat ttgcattttt acgtaaagat acttttctcc ggttaacggc caaaacacga
     2461 caactcataa aagattaaat gtaacatcag taaaatcgaa tagcatattg actgcttaaa
     2521 caggacagag ggttttgtag tgaggttaac tgattttagc gatcgtaaaa aaaggactaa
     2581 caaatttact aaactggatg tgtttcagac aaagcaatgt gtacagcaat gcttaatgaa
     2641 aatacttgta gaagtgttta tgaaaatacg tgtatgtctg gtaaaacact tagtagaaaa
     2701 tacgtatata acacttattg aaatgcttag taaaaatacg tgtatataat atcataccga
     2761 cattagcaac attctcagac actcatgcag actgaatgtt gattacccgt tttcacatca
     2821 ggcatggttc tttactgacc aaaaaacaaa ctggtttact cttgaattat tttctctacc
     2881 tcagaaaaca tggtctcagg aatctgctat ggcttcgtag tttctgttgt tcttttcata
     2941 aaagttataa gtcattgtca taatcatacg ataatcactt tatgttaatt tttactgtca
     3001 cacgctactg actttttcag tcattgccag aaaggggctc tttttacttc catttcacca
     3061 ctcaacaaat gcaaaacttg tccagtaaag cggaccacct cttgctcata agcaacgaat
     3121 cgtctccagg aacagtcctc aaacattgca gaaacaaaaa caacaaaacc ctcattatca
     3181 ctgatgttcg gaaaatatcc ctgaacaaaa aaacgaaaac aaaatgagac gcattatcat
     3241 gaatgtagtc aaaaagacgt tatggtggct ttcagttaaa tggtactatt tctcataaat
     3301 ccacttaact ttttttactg attcatccca gagaaccact ttatcagtaa aaaatgaatt
     3361 atatagattg acgagttttt ctgtttcagt tattcccaat gtagtatgta tcagttgtag
     3421 atatactttt atccagattt ctttaccctc cctccactta tctataaaac ttcccagctt
     3481 acttaatcgt tgatttataa aaaacgaatc aatatcatga aaaaactcaa caagaaaaca
     3541 gcacgataca atctcaacaa aaaacaaatt ctctttaaaa gcattataaa accttatcaa
     3601 cacataacga aaaacacctc ctgttaatct ttcctgttca taaaacaaca aaccaaaaac
     3661 aggaggaaat cttttaacca caccactttt aatccagtaa ggatgatgat tagtctttac
     3721 tggcaatgaa taaaagaaca tttcggtttc tcttttccca ccacaaacag acaaaactgt
     3781 cttataaaga ctttttgaat cattatgtcc tagtgcccca gacgaattag cagagtattt
     3841 tctttttact ttttgcctta atggagctgg aagaataata aaacgagatg gcagataaca
     3901 atcgctttca gaagaccggc attcgcacac atgaagattt atatttacat ccggacaatt
     3961 caaaaaccac acagaataat tatcgccccg tttgcaatat gaaacccatg aataaattgc
     4021 ataaagttca gaaagcgcat ctaactctgc ttttgactta aatgtgattc cgtttcttcg
     4081 aattctcgtt tccagcgttc tccatgccgg agttttcagt atctcacgaa cttttttatt
     4141 aagttcagtc agcgatggcc cctgctcctg tttatgtttt tttctgctgt taatgatttc
     4201 tctttctttt actaattttt tcttactttt tggtcctttt atctttcttg gcaatgcttc
     4261 atttaatctg tgaacaggat tttgctctct tctttttttg agctcacaaa acctctcata
     4321 atgttttctg cacagtcttt tctccactgc catttttact gagaaaacct gattgttaca
     4381 attttttctg acacatttgt ttttacgtcc ggtcatcctc tcatctcctg aaaccgcagt
     4441 atgtcattag ttcccgttcg gaaaaactca cttcatactc cattacactt taacaatcat
     4501 gtccgtaatt cagacattcc atcatttttc acgtccatat tacctgaatg ataaaccgga
     4561 ttagtgtgat ccggttcagt gaaatcaaca ggataccggt atgtcattca gccattcttc
     4621 cctctctgca caagtgaaat catatctgac gtttcttcct gaagaaatac gccagaaaat
     4681 ccttgaacat ctccacggtg ttattcatta cgagcccgtg attggcatta tgggtaaatc
     4741 cggcaccggc aaaagcagcc tgtgtaatgc catttttcag tcccgtatct gcgccacgca
     4801 tcccctgaac ggctgcaccc gccaggctca tcgtcttacc ctgcagctcg gtgaacgcag
     4861 aatgacgctg gtcgatctgc ccggcattgg tgaaacaccg cagcatgatc aggaataccg
     4921 ggagctttac cgtcagttac tgccggaact ggatctgatt atctggatcc tgcgggctga
     4981 tgaacgtgcg tatgctgccg atattgccat gcatcagttt ttactgaatg aaggtgcaga
     5041 tccctcgcgt tttctgtttg ttctcagcca tgccgatcgc gtatttcctg ctgaagaatg
     5101 gaacgacaca gaaaaatgcc cgtcccgtca gcaggaactc tcactggcaa cagtaacagc
     5161 ccgggtggca accctgttcc cttcatcatt tccggtactc cccgttgccg cacctgtcgg
     5221 ctggaacctt ccggcatttg tgtcgctgat gatccacgca ctgccaccgc aggcaaccag
     5281 cgcggtttat tcacatatcc ggggggaaaa ccgctctgaa caggcccgga aacacgcaca
     5341 acagactttt ggtgacgcca tcggaaaaag ctttgacgct gccattaccc ggttcagctt
     5401 tccagcctgg atattacagc ttctgcgcaa aacccgggac cgcattatcc acctgctggt
     5461 cacactgtgg gatcacctgt tctgagcgcc ccggagtccc ccgtggcaac cgtatacctt
     5521 tacacgacaa cggattacgg taaccactgc cgtataccgt ctgtcattat caataacacg
     5581 ctctttaatt tcagaggtca gtcatgaata ccagaattct ttttcccctg ctgttcactg
     5641 tggcatcatt ctccgcctcc gccggcaact gggctgtcaa aaacggctgg tgtcagacca
     5701 tgacggaaga tggtcaggcg ctggtaatgc tgaaaaatgg cacgattggt attaccggcc
     5761 tgatgcaggg atgcccgaat ggtgtacaga cgctcctggg cagccgtatc agtattaacg
     5821 gtaacctgat ccccacatca caaatgtgta atcagcagac gggattcagg gctgttgagg
     5881 tggaaatcgg acaggcgccg gaaatggtca aaaaagccgt tcactccata gcagagcgtg
     5941 atgtgtccgt tttacaggca tttggtgtac gaatggaatt cacccgcggt gatatgctga
     6001 aggtctgtcc gaaatttgtc acatcacttg ccggtttttc cccgaaacag acgaccacta
     6061 ttaataaaga ctccgtactg caggctgccc gacaggcata cgcccgtaaa tacgacgagg
     6121 aaacaacaga aaccgctgat tttggctctt acgaagtaaa aggcaataag gttgagtttg
     6181 aagtgttcaa tcctgaagac cgtgcgtacg acaaagtgat cgtcacggtt ggtgctgacg
     6241 gtaatgccac cggagccagc gttgaattta tcggaaaata gccgatatgt cggactgtca
     6301 ccctgtttta ttgcccgaag gccctttctc acgcgaacag gcgatggctg tcacaacagc
     6361 ttaccgcaat gtgcttattg aagatgacca gggaacgcat ttccggctgg ttattcgcaa
     6421 tgctgaaggg cagctacgct ggcggtgctg gaattttgaa cctgatgccg gaaaacagct
     6481 aaatccgtat ctcgccagtg agggaattct caggcaataa acgtcttcat ttcatccatc
     6541 aggccgcgtc ttctccggga gacgcggcct tttcgtttat accgctaact cattcataag
     6601 gaacaaagta tgcaattagc cagtcgtttt ggtcatgtaa atcagatccg tcgggagcgc
     6661 ccactgacac gcgaagaact gatgtaccac gtcccgagta tttttggaga agaccggcac
     6721 acctcccgca gtgaacagta tgcgtacatt cccaccatca ccgtcctgga aaatctgcag
     6781 cgggaaggct ttcagccatt cttcgcctgc cagacccgtg tgcgcgacca gagccgtcgg
     6841 gggtatacca aacacatgct gcgtctgcgc cgtgacgggg agataaacgg acaacatgtc
     6901 cctgaaatca tcctgctgaa ctcccatgac ggtacctcca gctaccagat gctgccgggt
     6961 tacttcaggt tcgtctgcca gaacggctgc gtctgtggtc agtctctggg ggaagtgcgt
     7021 gttccgcacc ggggaaatgt ggtggacaga gtcattgaag gggcttacga ggtggtgggc
     7081 gtgtttgacc ggattgagga aaagcgtgat gccatgcagt cgctggtcct gccgccaccg
     7141 gcacgccagg cgctggcaca ggcggcactg acttaccgtt atggtgacaa acatcagcca
     7201 gtcaccactg ccgacattct gacgccacga cgccgggagg attacggtaa ggacctgtgg
     7261 agtgcttatc agaccatcca ggagaatatg ctgaaaggcg ggatttccgg ccgcagtgca
     7321 aaaggaaaac gtatccatac ccgggccatt cacaacatcg acaccgacat taagctcaat
     7381 cgcgcattgt gggtgatggc ggaaacgctg ctggagaacc tgcgctgatg ccgtttacct
     7441 gaatcacgtc tgtccctgcc cccgagcctt cttcattcat ttgcttttta taaggaataa
     7501 tatcatgaca acctcttcgc ataattccac cacaccttct gtttccgtga ccgctgcatc
     7561 agggaataac ccgcctcagc tggttgccac tcccgtccct gatgaacagc gcatcagctt
     7621 ctggccgcag cattttggtc tcattccaca atgggtgacc ctggagcccc gtgtcttcgg
     7681 ctggatggac cgtctgtgtg aagactactg cggtggtatc tggaatctgt acaccctgaa
     7741 caacggtggc gcatttatgg cacccgaacc ggatgacgat gatgacgaaa catgggtgct
     7801 gtttaacgtc atgaacggta accgcgctga aatgagcccg gaagccgccg gcattgccgc
     7861 ctgtctgatg gcgtacagtc atcacgcctg tcgtacggag tgttacgcca tgacggtcca
     7921 ctattaccgg ctgcgggatt acgccctgca gcatccggaa tgcagcgcca ttatgcgcat
     7981 catcgactga atggagagaa gcacaatgca acagctttcc tttctgcccg gagagatgac
     8041 gcccggcgag cgcagcctca ttctgcgggc cctgaaaacc ctggaccgcc atcttcatga
     8101 acccggtgtg gccttcacct ccacgcatgc ggcacgggaa tggctgattc tgaacatggc
     8161 gggactggag cgggaagagt tccgggtact gtatctgaac aaccagaatc agctgattgc
     8221 cggtgaaacc ctcttcaccg gcaccatcaa ccgcacggaa gtccatcccc gggaagtgat
     8281 taaacgtgcc ctgtaccaca atgccgctgc cgtgatactg gcacacaacc acccgtccgg
     8341 tgaagtcact cccagtaagg cagatcgcct tatcacggaa cgcctggtac aggcactggc
     8401 cctggtggat atccgggtac cggaccatct gatagttggt ggcaaccagg ttttctcctt
     8461 tgcggaacac ggtctgcttt aacccgtcac cgccacaacc atatcacacc tgttttcact
     8521 tttatcttct gtcttcagag gtatcccact atgaaaatca tcacccgtgg cgaagccatg
     8581 cgtattcacc gtcagcatcc ggcatcccgt ctttttccgt tctgtaccgg caaataccgc
     8641 tggcacggca gtgctgaagc gtataccggt cgtgaagtgc aggatattcc cggtgtgctg
     8701 gccgtgtttg ctgaacgccg taaggacagt tttggcccgt atgtccggct gatgagcgtc
     8761 accctgaact gaatcaggac gggcattcag atgagcagaa ttatcaccac caccgtgtat
     8821 acactgaatg agctatcctc caccgcacgg gaaaaagccc gcgacgagta ccgtcagcat
     8881 catgctgaca gcaactggta tgaaaacgtg tatgaagact tcagggaggt ctgtgacatt
     8941 ttcgggattg acctccgcca gcgtgttatc cggctcagca acggcaggtt tatggaagag
     9001 ccgtgcatct ggttcagcgg attctgcagc cagggggacg gagcctgttt tgaagggctc
     9061 tggcactggc agccagcggc accccggaaa atcagggagt atgccccgca ggaccgtgaa
     9121 cttcatcgta tcgcggatgc cctgcaggcg gtacagaagc gtaacttctg gcagttacag
     9181 gctgaaatca gtcaccgggg acgttactgc catccgtaca gcatggatat caccgtcacc
     9241 cggaacagtc cgactggtca ggtaatgaca accgatgcgg aagccgcagt cagcgaagtc
     9301 ctgcgcgacc tggccttctg gttgtaccgt cagctggaaa acgagtacga ctggctgacc
     9361 tcagacgccg ctgtggatga ggccctgctc atcaacgaat acaccttcac cgaagccggt
     9421 ctgcgcgccg gctgactcgt catcgttaaa ctatcattca ccgattttct gtaaggattt
     9481 tatcgtgtca gactcactcc atgaaacaaa ttatcccgac gataacaacg accgcccctg
     9541 gtgggggcta ccctgcaccg tgacgccctg ttttggggca cgtctggtgc aggagggtaa
     9601 ccggttgcat taccttgccg accgcgccgg tatcagaggc cggttcagcg acgcggatgc
     9661 gtaccatctg gaccaggcct ttccgctgct gatgaaacaa ctggaactca tgctcaccag
     9721 cggtgaactc agcccccgcc atcagcatac cgtcacgctg tatgccagag ggctgacctg
     9781 cgaagccgac accctcggca gctgtggtta cgtttatctg gctgtttatc caacatccga
     9841 aacgaaaacg taaaccaccg gaataatcgt ctgctccggc ccggtgcgct acagcaccac
     9901 tctcctcaaa atttaatctc tcatatcagg aaaatcttca gtatgaaaac attacccgac
     9961 acgcatgtac gggaggcatc gcgctgcccg tctcccgtca ccatctggca gatactgctg
    10021 tcccgactgc tggaccagca ttacggcctc acactgaatg acacaccgtt tgccgatgaa
    10081 cgtgtgattg agcagcatat tgaggcaggc atttcactgt gcgatgcggt gaactttctc
    10141 gttgaaaaat acgcactggt acgtaccgac cagccgggat tcagcgcctg tacccgttct
    10201 cagttaataa acagtattga tatcctccgg gcccgccggg caaccggcct gatggcccgc
    10261 gacaattaca gaacggtaaa taacattacc ctgggtaaac atccgggggc gaaacaatga
    10321 aactggccct gacgctggaa gccgacagca ttaacgtgca ggcactgaac atggggcgca
    10381 ttgtcgttga cgtcgatggt gttactctcg ctgaactgat taacgtggtc tgcgataacg
    10441 gttactccct tcgtgttgtt gatgaatctg accggacatc agcagagcgc acgccaccat
    10501 ctgcggccct taccggcata cgctgcagta ccgcgcatat cacggcaaag gacaacgcct
    10561 ggctgtactc gctgtcacat cagacgaatg acttcggcga atcagaatgg attcatttta
    10621 ccggtagcgg atatctgtta cgtaccgatg cgtggtcgta cccggttctg cgacttaaac
    10681 gcctgggcct gtcaaaaacg tttcgtcgtc tgatcgtcac gctcattcgc cattatggcg
    10741 tcagtctcat tcatctggat gcctgcgctg aatgtctgcc gggtctgccc actttcgact
    10801 ggtaatcagg gaaattcaca acatgaaatc attaacgaca gaaacggcgc tggatattct
    10861 gattgcgtgg ctgcaggaca atattgactg tgaatccggg attatcttcg acaacgatga
    10921 ggatagaacg gattcagcag cactgttgcc ctgcattgaa caggccaggg aagatatccg
    10981 taccctgcgc caactacagc ttctgcaaca gaaccggtga gtcttactca ccatacttca
    11041 ttcccctgac gccagcctga atacagctgg cgttttcgtt tataaaccaa aaggaaaaac
    11101 gatgatgtca gatatcacag cctcccgtcc ggaagtggtc accgggcata cggacgttat
    11161 ttgctcaacc agtatccgcc acattctggc tgtacgaaag agtacactgc tgcaaatcga
    11221 cacacttatc cggcaactgg ctgaaatatc agcaatgaca gaaagtattg gcggtaaaac
    11281 cgcccgggac tgggccatga aacaggattt tcgctgcggt tgctggctga tggagaaacc
    11341 ggaaaccgca atgaaagcca tcacccggaa tctcgatcgc gaactctggc gtgacctgat
    11401 gcaacgttca gggatgctgt cattaatgga tgcacaagcc cgtgatacat ggtaccggtc
    11461 actggagtac gataattttc cggaaatcag cgaagcaaat atcctgagca cgtttgaaca
    11521 actgcaccag aacaaagatg aagtgtttga gcgaggggtg ctcaacgttt tcagaggact
    11581 gagctggaat tacaaaacca attcaccctg caaatttggc agtaaaatta tcgtcaacaa
    11641 tctggtgagg tgggaccggt gggggtttca tcttatcacc gggcaacagg ctgatcgact
    11701 tgccgatctg gaaagaatgc tacacctgtt cagcggcaaa ccgatccccg acaaccggga
    11761 aaacatcact attcgtctgg atgatcacat ccagtctgtt cagggtaaag aggactatga
    11821 agatgagatg ttcagcatca gatactttaa gaagggctcc gcgcacatca cgttcaggaa
    11881 accagagctg gttgacagac tgaatgacat tattgcgaaa tactatccaa atgtattgac
    11941 cgaaaggtaa tgtgaccctg ccccgctatt aaacatgccg tattactgct atcattctta
    12001 atatttttcg gaggaagcat gactacaaaa gaccgtattc agtcccgact gaaccgttca
    12061 aagcgttatg tgttcacccg ggatgacttc agggatatcg ctggctatga tcaggttggc
    12121 agagctcttc gtacgctggt aaacgaaggt aagttgatga aagtgggcta tggtgtttac
    12181 accaaagccc gtcgcaacgt tattacagga aaaatcatgc ctgcagcacc tggtggctct
    12241 gccgctgtaa tcaccgaagc cctggatcgt ttgaatatca gatacagctt gatcggcgca
    12301 acagaatgct acaataaagg tcagtccaca cagattccgg tatctccgga gttcaaaaca
    12361 cctcctcgct ttaaaagagt gttagttgta gggaaaagta aaatcaatgc ctgaattaac
    12421 atcattattt cctgacgttg ccaacgcact ggatattgaa tctgtcgcca tcgtcgaaaa
    12481 agattatttt gtggttaatc ttttaaagtt actaaaagaa ataaaaccag aaacacatac
    12541 tctcgtgttt gcaggaggta ccgcattgtc aaaagctggt atctcattga acagaatgtc
    12601 agaagatatt gatataaagc tcgtgccaac agagaacttt atgcaaaatg gcagaaacag
    12661 gaaaagaaaa attcgcaagg aaatcgtgca aataatcacg gatgttcttc ataattctga
    12721 cattttcagc cttgataatg aaaacgcccg tataacacgt gatgagtatc gttataacga
    12781 gatccccgta cgttatcccc agacatttgc ccaggccccc tgtcttcgtc catttattaa
    12841 gctggagttg atggaaacca ctctgctgga acacccggaa agcagagata tttactcact
    12901 cgtcacggag ttaacgggta atggcacacc tgtaacagca ttcccctgtg ccaccatttt
    12961 atccactcag gctgaaaagc tcatatccat gatgcgaaga acagccatac ttcttcgcaa
    13021 tcccgaacaa caggatgatg agtccctggt acgccacatt tacgacaatt attgcattgt
    13081 cagggaaaaa ggtgtgaatg ttccagtact gaaaaatttt gttcagatat gtattcaaca
    13141 ggacattgag cgctatggta accagcaccc acaatttcgt aactcaccag ttgatgaact
    13201 taagaaaggg ctggatgcac tccgggatga tcctgtacac aaattgcgtt ttcaacgatt
    13261 tgttaaaccg atggtatttg gtaatacaca gattgactgg gaagaagcct actcctgttt
    13321 cagacaaaca gcgttgagtg ttctgaccaa ctaacaaacg cgttaagtac gattccgcgc
    13381 atcagcacat cgaaccagac aaaataatta cagccaagca caaaaaagag ggattatcgc
    13441 gtcaaaagaa ttcgaattgc acatgggggc ctcattggtg gcctcaaaaa taacaaacac
    13501 aaaacaatca atataaaaca acttgttata caaccagttt cattccgagt ccgggcacca
    13561 aattcatatc aacggacctc tacggaggtt cgtttttcgt ttcagaacgc cacgatttaa
    13621 gcgttctgcc tacaaatcaa ttctaccgaa ctcaaccaga ttccccccac atcaacccca
    13681 ttgtgtgggt ataattgcgg gcatacccca gttcgacaga atttgtaccc tctttaacgc
    13741 attcagaagg ctgaactatg gcactgactg acgcaaaaat ccgggctgca aagcccactg
    13801 acaaggctta taaactcact gacgggactg gcatgttcct gctggtacat cctaatggct
    13861 cccgttactg gcgtctccgt tatcgtattc tgggtaagga gaagactctg gcacttggtg
    13921 tgtatccaga agtttctctc tccgaagctc gtacaaaacg ggatgaggcc cgaaaactga
    13981 tttcggaggg ggttgaccct tgcgaacaga aaagagctaa aaaagtagtc cctgatttac
    14041 agctctcttt tgaacatatt gcgcgacgct ggcatgccag taataaacaa tgggcacaat
    14101 cacacagcga taaagtactc aaaagcctcg agactcacgt tttccccttt atcggcaacc
    14161 gggatatcac aacactcaat accccggatc tgcttatccc tgttcgtgct gcagaagcta
    14221 aacaaattta tgaaatcgcc agtcgtctgc agcaaagaat atctgccgta atgcgttatg
    14281 ccgtacagtc tggcatcatc agatataatc ctgctctgga tatggctggc gcattgacta
    14341 cggtaaaacg ccagcatcgc cccgctcttg atctttctcg cctgcctgaa cttttgtcgc
    14401 gtattggcag ttacaaaggg caaactgtca cccagcttgc cgttatgctg aatttactgg
    14461 tttttattcg ttccagtgaa ctcagatacg cccgctggtc tgaaattgat attgacaatg
    14521 ccatgtggac tattccagcc gaacgcgaac ccctgccagg cgtaaaattc tcacaccggg
    14581 gctccaagat gcgaacacca catcttgtgc cactcagcaa acaggctgta gccatactga
    14641 cagaactaca gacatgggct ggtgaaaatg gtctgatctt tacgggagca catgacccgc
    14701 gtaaaccaat cagtgaaaat gtaatgaacg catc
//
LOCUS       DADKRT010000103        14565 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.104, whole genome shotgun sequence.
ACCESSION   DADKRT010000103 DADKRT010000000
VERSION     DADKRT010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14565
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.104"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..421
                     /locus_tag="JQ356_002644"
     CDS             <1..421
                     /locus_tag="JQ356_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY4622689.1"
                     /translation="LMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL
                     AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL
                     SIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR"
     gene            437..919
                     /locus_tag="JQ356_002645"
     CDS             437..919
                     /locus_tag="JQ356_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HAY4622690.1"
                     /translation="MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG
                     DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE
                     GLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
                     "
     gene            complement(996..1343)
                     /gene="rplS"
                     /locus_tag="JQ356_002646"
     CDS             complement(996..1343)
                     /gene="rplS"
                     /locus_tag="JQ356_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HAY4622691.1"
                     /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(1385..2152)
                     /gene="trmD"
                     /locus_tag="JQ356_002647"
     CDS             complement(1385..2152)
                     /gene="trmD"
                     /locus_tag="JQ356_002647"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HAY4622692.1"
                     /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
                     GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
     gene            complement(2183..2731)
                     /gene="rimM"
                     /locus_tag="JQ356_002648"
     CDS             complement(2183..2731)
                     /gene="rimM"
                     /locus_tag="JQ356_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HAY4622693.1"
                     /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
                     EGDYYWKDLMGCQVVTTEDYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLTTRSIEVDWDPGF"
     gene            complement(2750..2998)
                     /gene="rpsP"
                     /locus_tag="JQ356_002649"
     CDS             complement(2750..2998)
                     /gene="rpsP"
                     /locus_tag="JQ356_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HAY4622694.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
     gene            complement(3135..4496)
                     /gene="ffh"
                     /locus_tag="JQ356_002650"
     CDS             complement(3135..4496)
                     /gene="ffh"
                     /locus_tag="JQ356_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HAY4622695.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
                     LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
                     IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            4588..5454
                     /locus_tag="JQ356_002651"
     CDS             4588..5454
                     /locus_tag="JQ356_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311501.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HAY4622696.1"
                     /translation="MQRLEQRSPDAILLLFLIAQTVDITMPVFALLALVAYSVSLALI
                     VPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSGQNLSLLNVGSLVSLMIC
                     TVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEATPGMLVHIGLSLFSY
                     ATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHITQIGVVLLTLTLCT
                     GLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLA
                     YFGSRIVQQLIS"
     gene            5475..6761
                     /locus_tag="JQ356_002652"
     CDS             5475..6761
                     /locus_tag="JQ356_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY4622697.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK
                     TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID
                     INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA
                     DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE"
     gene            complement(6816..7409)
                     /gene="grpE"
                     /locus_tag="JQ356_002653"
     CDS             complement(6816..7409)
                     /gene="grpE"
                     /locus_tag="JQ356_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HAY4622698.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
                     ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
                     DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
     gene            7532..8410
                     /gene="nadK"
                     /locus_tag="JQ356_002654"
     CDS             7532..8410
                     /gene="nadK"
                     /locus_tag="JQ356_002654"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HAY4622699.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCKKGYEVIVEQQIA
                     HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
                     DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            8496..10157
                     /gene="recN"
                     /locus_tag="JQ356_002655"
     CDS             8496..10157
                     /gene="recN"
                     /locus_tag="JQ356_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HAY4622700.1"
                     /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
                     ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALMAYGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
                     IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
                     QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ
                     FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALATQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
                     TDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            10306..10647
                     /gene="bamE"
                     /locus_tag="JQ356_002656"
     CDS             10306..10647
                     /gene="bamE"
                     /locus_tag="JQ356_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417107.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HAY4622701.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
                     KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT
                     NIDNKPALSGN"
     gene            complement(10709..10999)
                     /locus_tag="JQ356_002657"
     CDS             complement(10709..10999)
                     /locus_tag="JQ356_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HAY4622702.1"
                     /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
                     DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
     gene            complement(10989..11465)
                     /gene="ratA"
                     /locus_tag="JQ356_002658"
     CDS             complement(10989..11465)
                     /gene="ratA"
                     /locus_tag="JQ356_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin RatA"
                     /protein_id="HAY4622703.1"
                     /translation="MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFL
                     PGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGG
                     WKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR"
     gene            11597..12079
                     /gene="smpB"
                     /locus_tag="JQ356_002659"
     CDS             11597..12079
                     /gene="smpB"
                     /locus_tag="JQ356_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HAY4622704.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
                     "
     gene            12294..12656
                     /gene="ssrA"
                     /locus_tag="JQ356_002660"
     tmRNA           12294..12656
                     /gene="ssrA"
                     /locus_tag="JQ356_002660"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(12817..14565)
                     /locus_tag="JQ356_002661"
                     /pseudo
     CDS             complement(12817..14565)
                     /locus_tag="JQ356_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417134.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         3592 a         3911 c         3432 g         3630 t
ORIGIN      
        1 gttgatgaac aattccgatg cccgaaaaac gtcggcgtta ctatttcttg atggcgataa
       61 tttcaaatat atcaatgata cctggggtca tgcgacgggc gatagggtct tgattgaaat
      121 cgcaaaacgg ttagctgaat ttggcgggct gcgacataaa gcataccgcc tgggcggcga
      181 tgaattcgct atggtgctct atgatgtaca gtcggaatct gaagtgcaac agatatgctc
      241 agcactgaca caaatcttta atctcccgtt tgatcttcat aatggccatc agaccaccat
      301 gacattaagc attggttacg cgatgaccat tgagcacgcc tctgcggaaa aattacaaga
      361 gcttgccgat cacaatatgt atcaggccaa acaccagcgt gccgaaaagc tggtgagata
      421 acaaggatat atcgatatga taaagcacct ggtagccccc ctgattttca cctcactaat
      481 actgactggc tgccagtccc ctcagggaaa gtttactcct gagcaagtcg ccgctatgca
      541 atcttatgga tttactgaat ccgccggcga ctggtcgctg ggcttatcag atgccattct
      601 gttcgcaaaa aatgactaca aattgctccc ggaaagccag caacagatcc aaaccatggc
      661 agccaaattg gcctcgacag ggctaacaca tgcccgtatg gatggacaca ccgataacta
      721 tggtgaagac agttacaacg aaggcttatc attgaaacgg gcgaatgtcg tggccgatgc
      781 atgggctatt ggtggacaaa ttccacgcag caatctcacc acacagggtt taggaaaaaa
      841 atatcccata gccagtaaca agaccgccca gggccgcgcc gagaaccgcc gcgtcgcagt
      901 ggtgattaca accccttaaa acacgagcaa acagacaaaa aaagggccag ccaattggcc
      961 agcccttctt aacaggatgt cgcttaagcg aaatcttagt taagacgctc tttgatacga
     1021 gcagccttac cagtacgctc acgcaggtag tacagtttag ctttacgaac agcaccacga
     1081 cgtttgacag aaatgctgtc aactaccgga gagtgagtct ggaagacacg ctcaacgcct
     1141 tcgccgttgg aaattttacg aacagtgaat gcagagtgca gaccgcggtt acgaatagcg
     1201 ataaccacgc cctcgaatgc ctgcagacgt tttttggaac cttcaacaac ccatactttc
     1261 acttccacgg tatcacccgg acggaaggaa ggtacgtcct gcttcatctg ctcttgttca
     1321 agttgcttaa taatgttgct cataatttaa tctcttatcc tgggtaaact gatatctcgg
     1381 gggcttacgc catcccatca tgtttatgtt gctgttgtgc gtgttccgtt ttgaactccg
     1441 ccagcaacct tgcttgctct tcagtcagag ccaggttttc cagaagttca ggtcttctaa
     1501 gccaggtacg gcccagcgac tgtttcaaac gccagcgacg tatctcggca tggttgcccg
     1561 acagtaacac tggcggaact tccatccctt ctaacacctc aggccgcgta tagtgcgggc
     1621 aatccagcaa tccttcagca aaggaatctt ccgttgccga ggcttcatgt cccagtaccc
     1681 ccggaataaa ccgggaaacg gagtcaatca gcgtcattgc tggtaactca ccaccactga
     1741 gaacgtaatc gccgattgac cattcttcgt caatttcggt ttggatcacg cgctcatcta
     1801 taccttcgta gcgaccgcac accagaatca atttttgatt cgttgccaat tcgctgacgc
     1861 ccgcttgatc aagcttgcgt ccctgtggtg acagataaat cacctttgcg ccttcacccg
     1921 ccgcggcttt tgctgcatga atggcgtccc gcaagggttg caccatcatt aacatccccg
     1981 gtccgccgcc gtaaggacga tcgtccacgg tacggtgccg gtcatgcgtg aagtcgcgag
     2041 gactccagct ctggatgctc agcaggccat ttttaactgc ccggccagtt accccgtaat
     2101 cggtaattgc gcggaacatt tcaggaaaca ggctaattat gccaatccac atagcgccgt
     2161 cttttaccgt ttatccggtg gtttaaaaac caggatccca atctacttcg attgaacgag
     2221 tagtgagatc gactttcttg ataacctgcc catcgaggaa cggtacgaga cgttccttga
     2281 taccaaacgc atctttcagg tttgccttaa tgacgagaac gtcattagat ccggtttcca
     2341 tcatatcgac gactttaccg agatcgtagt cttcagtggt tactacctgg cagcccatca
     2401 ggtctttcca gtagtagtca ccctcttcaa gctgaggcaa ctgcgatgaa tccacgacaa
     2461 tttcacaatt cgtcagcagg ttcgccgcat cacgatcgtc aacgcctttc agcttgatga
     2521 tcatgtcctg attgtggtgc ttccagcttt ccagctggac ttgctgccac tgacccgcct
     2581 tctggataaa ccagggctga tagtcaaaaa tgctttcggc gtcttcggtg gaagaaaaca
     2641 ctctgagcca cccacgaata ccgtaagacg aacccatttt tcccaaaacg atgggatcaa
     2701 caggtgcttg cgcggtgagt tgtttgctca tcatgaccac cgtgacagat taagctgctt
     2761 tgtttacttc tttgatcagc gcagcaacgc gatcagaaat agttgcgccc tggccaaccc
     2821 agtgagcgat gcgatccaga tccaggcgag tgccttcttc tttttcgcta gcgattgggt
     2881 tgaagaaacc aacgcgctcg atgaagcgac cgttgcgtgc attacggctg tcagcgacaa
     2941 caacctggta gaacggacgc tttttagcgc cgtgacgtgc taaacgaata gttaccataa
     3001 catcctcttg tgtgaataaa acaaccggac cccatcgagg aacggagtcc ggtgtcatat
     3061 taaaagcccg aaaattttac tgatttctgg agaaaatgca atcagcagtt aataactctg
     3121 tcgcataagg tcatttagcg accaggaaat cccggcggca tcatcccctt catgcttctc
     3181 atcatcttcg ccattccgcc cttcttcatt ttcttcatca tgcgctgcat gtcgtcgaac
     3241 tgtttcagaa gacggttaac gtcctgcacc tgcataccgc aaccggcagc aatacggcgt
     3301 ttacgcgaac ctttgatgat ttctggctta gcgcgctctt tcatcgtcat cgagttgatg
     3361 atggcttcca tacgcaccag cactttatcg tccatctgtg acttgacgtt atccgggatc
     3421 tgccccatgc ccggcagctt gcccatcagg ctggccatgc cgcccatatt tttcatctgg
     3481 cgcagctgct caagaaagtc gttgagatcg aagccgtcac cttttttcag cttgctggct
     3541 aatttctctg cctgcgcgcg gtcaactttg ctttcgatat cttcgatcag cgacagtacg
     3601 tcgcccatgc cgagaatacg cgacgcgatg cggtccggat ggaacggctc cagcgcctca
     3661 gttttctcgc caacaccgag gaacttgatc ggtttgccag tgatgtgacg aatagagagc
     3721 gccgcaccgc cgcgggcatc gccgtccact ttggtcaaca ctacgccggt aagcggtaac
     3781 gcttcattga atgcttttgc cgtattggcc gcatcctgac cggtcatggc gtcaaccaca
     3841 aacagggttt caaccgggtt aatcgacgca tggacttgtt tgatctcgtc catcatcgct
     3901 tcgtcaacgt gcagacgacc agcggtatcc accagcagca cgtcgtagaa tttcagtttg
     3961 gcttctttca gcgccgcgtt aacgatatct accggcttct gaccaacatc agaagggaag
     4021 aaatcaacgc ccacctgctc tgccagcgtc tcaagctgtt tgattgccgc cgggcgataa
     4081 acgtcggcag aaaccaccag cactttcttc ttgtgcttct cgcgcaggaa cttaccgagt
     4141 ttaccaacgc tggttgtttt accggcacct tgcaggcccg ccatcagcac gaccgcaggc
     4201 ggttgcgccg ccaggttcag ggtctggttc tcttcgccca tcgccgcaac cagttcgtta
     4261 cggacgattt tgacgaactc ctgccccggc gtcaggctct tattaacttc atgaccaacc
     4321 gctttctctt ttacgcgatt gataaactca cgcactaccg gcagagcgac atccgcctcc
     4381 agcagcgcca tgcgcacttc gcgcagcgta tcttttacgt tgtcttcagt taggcgtcca
     4441 cggccactga tattgcgcag cgtgcgcgac aaacgatcgg ttaaattatc aaacattgtc
     4501 tctcgcctgg ggtggaaacg gttggccgca atcgcgacac atcatcagta ttttgccgca
     4561 gtataacatg aaggcgtctt tgttgttatg caacggttgg agcagcgttc acctgacgct
     4621 atactgcttc tctttcttat tgctcaaact gttgacatca ctatgcccgt ttttgctctg
     4681 ctcgcgcttg tcgcctactc cgtcagtctt gcgctgattg ttcccggtct gctgcaaaaa
     4741 aacggcggct ggcggcgcat ggctattatt tctgcggtca ttgcgctggt ctgccacgca
     4801 atcgctctgg aagcccgcat cctgcccgac ggtgatagcg gacaaaacct cagcctgctg
     4861 aacgttggtt cattggtcag tttgatgatc tgtacggtaa tgaccattgt ggcttctcgc
     4921 aatcgtggct ggttgctgct acccattgtc tatgcctttg cgcttatcaa cctggcgctg
     4981 gcgaccttca tgcccaatga atacatcacc catctggaag caacgcctgg gatgctggtg
     5041 cacattggct tatcgctctt ttcctatgcc acgctaatta tcgccgccct gtacgcgctg
     5101 caactggcgt ggattgatta ccaactgaag aacaagaagc tggcatttaa ccaggaaatg
     5161 ccgccattga tgagtatcga gcgtaaaatg ttccacatca cgcagattgg cgtggtgctg
     5221 ctaacgctca cgctttgcac tggcctgttc tacatgcaca acctatttag catggaaaat
     5281 atcgacaagg ctgtgctctc tatcgtggcg tggtttgtct atattgtgct gctgtgggga
     5341 cattaccatg aaggatggcg tggacgccgc gtcgtctggt ttaacgttgc gggcgcggta
     5401 attctgacac tggcctactt cggcagccga attgtccagc agttaatcag ctaaacccag
     5461 aaaaggagtt tcccctggaa cacatttcta ctactacgtt gatcattatt ctgatcatca
     5521 tggtggtcat ttcagcctat ttttccgggt ccgaaaccgg aatgatgacc ctcaaccgct
     5581 atcgtctgcg acatatggcg aaacagggta atcgctcggc caaacgcgtc gaaaaattgc
     5641 tgcgtaagcc agaccgcctg ataagcctgg tgttaatcgg caataacctg gtcaatattc
     5701 ttgcctccgc gctcggcact attgttggga tgcgtttgta cggcgatgcg ggcgtggcaa
     5761 ttgcgactgg tgtgctgact tttgtcgtac tggtatttgc tgaggtattg ccgaaaacca
     5821 ttgccgcgct gtacccggaa aaagtcgctt atccgagtag ttttctgctg gctccgctgc
     5881 aaattttgat gatgccgctg gtctggttgc tgaatgctat cacccgtatg ctgatgcgca
     5941 tgatgggtat caaaaccgat atcgtggtta gcggctcttt gagcaaagaa gagttgcgca
     6001 ctatcgtgca cgaatcacgc tcacaaattt cccgtcgcaa tcaggatatg ctgctgtcgg
     6061 tgctcgatct ggaaaaaatg accgttgatg acatcatggt gccgcgcagt gaaattatcg
     6121 gtattgatat caacgatgac tggaaatcga ttctgcgcca actctcccac tcacctcacg
     6181 ggcgcatcgt gctctaccgt gattcgctgg acgacgccat cagtatgctg cgagtacgtg
     6241 aagcctggcg attgatgtcg gagaaaaaag agttcaccaa agaaaccatg ctgcgcgccg
     6301 cggacgagat ctattttgtg ccggaaggta cgccgctcag cacgcagttg gtaaagtttc
     6361 agcgcaacaa aaagaaagtc ggcctggtcg tcaacgagta tggagacatt caggggctgg
     6421 tgacggttga agatattctg gaagagattg tcggcgattt cactacgtcg atgtcgccaa
     6481 cacttgccga agaggtcacg ccgcaaaacg acggttcggt gattatcgat ggcaccgcca
     6541 acgtgcggga aatcaacaaa gcctttaact ggcatctacc ggaagatgat gcccgcacgg
     6601 ttaatggcgt cattcttgag gcactggaag agatccctgt cgcaggcacc cgcgtgcgta
     6661 ttggcgagta cgatatagat attctcgacg tacaggacaa tatgattaag caggtaaaag
     6721 tttttcctgt gaaaccgctg cgcgagagtg tggcggagta acgaaaacgg ccctgcattc
     6781 gcatgcaggg ccgtgaatta ttacgaaaac agaaattacg cttttgcttt cgctacagtt
     6841 accatcgccg cacgaatcgt acgaccattc agcgtataac ccttctgcat aatgcccagt
     6901 acgttacctg gcgcaacgtc atcagattcc accattgcga tagcctgatg cacattcggg
     6961 tccagcggca cgttagtttc ggcgatcact tcaacaccaa acttacgcac aacatccagc
     7021 atcgacttca gcgtcagctc aatgccttca accatcgcag acatatccgg gttagcttta
     7081 tcagccactt ccagcgcacg atccaggcta tcaatcaccg gcagcaattc gttgatgaat
     7141 ttctccagcg caaatttgtg ggctttttca atatccagtt cagtacgtcg acgcaggttt
     7201 tccatttcgg cttttacacg caaaatgccg tcacgttcac gggtctgggc ttcagccagc
     7261 tgagcttcga gattcgcaat tttttcatcg cgcggatcca cctgctcagc agaagcttct
     7321 ggctcaactg cctcaatctc ttcgtgctga tccatgataa tttcttccgg ggcttgcccc
     7381 tcaggcgttt tctgttcttt actactcatg aatttctccg cgtttttttc gcattcatct
     7441 cgctaacttc gcttattatg gggatcagtt tcagggtttc aagggaagca ctcacattgt
     7501 catcaatctt cgcaacaagg acctcggaaa aatgaataat catttcaagt gtattggcat
     7561 tgtgggacac ccacggcacc ccactgcact gacaacacat gaaatgctct accgctggct
     7621 gtgcaaaaaa ggttacgagg tcatcgttga gcaacaaatc gctcacgaac tgcaactgaa
     7681 gaatgtgaaa actggcacgc tcgcggagat tgggcaacta gctgatctcg cggtagtcgt
     7741 tggtggcgac ggtaatatgc tgggcgcggc acgcacactc gcccgttacg atattaaagt
     7801 tattggaatc aaccgtggca acctgggttt cctgactgac cttgaccccg ataacgccca
     7861 gcaacagtta gccgatgtac tggaaggcca ctacatcagc gagaaacgtt ttttgctgga
     7921 agcgcaagtc tgtcagcaag attgccagaa acgcatcagc accgcgataa atgaagtggt
     7981 gcttcatcca ggcaaagtgg cacatatgat tgagttcgaa gtgtatatcg acgagatctt
     8041 tgcgttttct cagcgatctg atggactaat tatttcgacg ccaacaggct ccaccgccta
     8101 ttccctctct gcaggcggtc ctattctgac cccctctctg gatgcgatta ccctggtgcc
     8161 catgttcccg catacgttgt cagcacgacc actggtcata aacagcagca gcacgatccg
     8221 tctgcgtttt tcgcatcgcc gtaacgacct ggaaatcagt tgcgacagcc agatagcact
     8281 gccgattcag gaaggtgaag atgtcctgat tcgtcgctgt gattaccatc tgaatctgat
     8341 tcatccgaaa gattacagtt atttcaacac attaagcacc aagctcggct ggtcaaaaaa
     8401 attattctaa ttttacgcca gcctctttac tgtatataaa accagtttat actgtacgca
     8461 ataacagtaa tggtttttca tacaggaaaa cgactatgtt ggcacaactg accatcagca
     8521 actttgctat cgttcgtgag cttgagattg attttcatag cggcatgacc gtaataactg
     8581 gcgagaccgg cgcgggtaaa tctattgcaa tagatgccct cggtctttgt ctcggtggtc
     8641 gcgctgaagc cgacatggtg cgtaccggcg ctgctcgcgc tgacctgtgc gcccgttttt
     8701 ctctgaaaga tacgccagcg gctctgcgct ggctggaaga aaatcagctt gaagacgggc
     8761 atgaatgttt gcttcgtcgc gtaatcagca gcgatggtcg ctcccgtggt ttcatcaacg
     8821 gtacagctgt tcctctgtca caactgcgcg aactgggtca gttgctgatt cagatccatg
     8881 gtcagcacgc tcatcaatta ctcaccaaac ctgagcacca aaaattcctg cttgatggct
     8941 atgccaatga aacctctcta ctgcaggaaa tgaccgcacg ttatcagttg tggcatcaaa
     9001 gctgccgtga cctcgcgcat catcaacagt taagtcagga acgcgccgcc cgtgcggaac
     9061 tgctgcaata ccaattaaaa gaacttaacg aatttaatcc gcagcccgga gagtttgaac
     9121 aaatcgacga agagtacaaa cgtctggcga acagcggtca attgctgacc accagccaga
     9181 atgcattggc attaatggcc tacggtgaag acgcaaacct gcaaagtcag ctttacacgg
     9241 ctaaacaact ggtgagcgaa ttgattggca tggacagcaa actgtccggc gtacttgata
     9301 tgctggaaga agctaccatc cagattgctg aagccagcga tgaactgcgc cactactgcg
     9361 atcgtctgga tctcgatccc aaccgactat ttgaacttga acagcgcatc tcaaaacaga
     9421 tttcgctggc acgtaaacat cacgtcagcc ctgaggcatt gccacagtat taccagtcgc
     9481 tactggaaga acagcagcaa ctggacgatc aggccgactc acaagaaacg cttgcgctgg
     9541 cggtaacgaa acatcatcag caggcactgg aaatcgcgcg cgcattacac caacaacgcc
     9601 agcaatatgc agaagaactt gcacagctga tcaccgacag tatgcatgcg ctctcaatgc
     9661 cgcatgggca gtttacgatc gatgttaaat ttgacgagca tcacctgggc gctgacggtg
     9721 ccgatcgtat tgagtttcgg gtaaccacca acccaggtca gccaatgcag cctattgcca
     9781 aagtcgcatc cggtggtgaa ttgtcccgca tcgcactggc aacccaggtc atcacggcgc
     9841 gtaaaatgga aaccccggca ctgatttttg atgaagtgga tgtagggatt agcggtccaa
     9901 cagcggcagt tgtcggcaaa ctgctgcgtc aactcggcga atcaactcag gtgatgtgtg
     9961 ttacccacct gccacaagtc gcgggatgtg gtcatcaaca ctattttgtc agcaaagaaa
    10021 ccgatggtgc gatgacagaa acgcatatgc aatccctgaa taaaaaagcg cggttacaag
    10081 agctggcgcg cctgcttggt ggcagtgaag tcacacgtaa tacactggcg aatgcgaaag
    10141 aactgcttgc agcgtaaact tttttcctgc ttcacggtca gagtaaacag caaaacgccg
    10201 taagaccgga aagcaaaagg ttttaaagtg atgaaaggtc tattatcatc ggcatattac
    10261 agatgagcca cgtactgcta gggcccgaaa aggaatcaaa tcactatgcg ctgtaaaacg
    10321 ctgactgctg cagcagcagt actattgatg ttgaccgcag gctgttccac tctggagcga
    10381 gtggtttacc gtcctgacat caaccagggg aactatctga ccgctaacga cgtatccaaa
    10441 atacgtgttg gcatgacgca acaacaagtt gcgtacgcat tgggtacacc gctgatgtcc
    10501 gatccatttg gtacgaatac ctggttctat gtcttccgcc agcaaccagg tcatgaaggt
    10561 gtaacgcagc aaacgctgac gctgaccttt aacagtagcg gtgtgttgac caatattgat
    10621 aacaaacctg cgctgagtgg taactaataa taaagttgct ctcaaagacg ttaaaaaagg
    10681 tgctcaatga gcaccttttt tctgtctgtt atttattcgc tgatttttct gctcgttgcc
    10741 tgcgaagctc tttcggatcg gcaatgagag ggcgataaat ctccacccga tcgccatcat
    10801 gcacactatc gcttagtttt gccggacggc tgtaaatgcc gactttgttt ttagttaaat
    10861 cgatatcggt acgcaattcc agcaagccac tggcgcgaat agcttcttca accgtcgcgc
    10921 cctcctgcag cgtcacgcgc tgcaggtact gcttctcagg tagcgcataa gccacctcaa
    10981 cggcaatttt acctggcact gtaaacctct ttcgcacgaa ccgtaaaagc ctggaccata
    11041 ttagacgcca gctctttaaa cacgcgacca aaggcgagtt caatcaactt attggtaaac
    11101 tcaaagtcga gatgaaactc gatacgacac gcctcctggc tcagcggcgt aaacttccat
    11161 ccaccaatca atttcttgaa cggcccatcc accagattca taagaatact ttggttactg
    11221 gtcaactggt tgcgggtagt aaacgttttg ctgatcccag ccttagagac atctaccgcc
    11281 gcagtcatct gcccaggagt ggactccaga atccgacttc cggtacaacc cggcaaaaac
    11341 tgaggataag actgaacgtc attcactaac tgatacattt gctccgcgct gtagggtacc
    11401 agtgcggtcc ggctaatctg aggcataact atttccatca acaaaaatcc aacaaataat
    11461 atcatttatc ctgctgtaaa aaaaacgcta tcccggcgct gggtaacatc gggttcatgc
    11521 taagatagag ccttgtcccc cgcaggattg atatggggtg ttttcgattt cagattaccg
    11581 atgattcacg acgcttatga cgaagaaaaa agcacataaa cctggttcag cgaccatcgc
    11641 gcttaacaag cgcgcccgtc acgaatactt tatcgaagaa gagttcgaag cgggacttgc
    11701 cctgcaaggc tgggaagtta aatccctgcg cgcaggaaaa gccaatatca gcgacagcta
    11761 cgtccttctg cgtgacggag aggcatttct gtttggcgct aacatcacgc caatggccgt
    11821 ggcctccacg catgtggtgt gcgatcctac ccgtacccgc aagttacttc tcaaccagcg
    11881 cgaactggac tcattgtacg gtcgcgtcaa tcgagaaggc tataccgtag tggcgctctc
    11941 cctgtactgg aaaaatgcct ggtgcaaagt gaaaatcggc gtcgccaaag gtaaaaaaca
    12001 gcacgataaa cgttcagata tcaaagaacg cgaatggcag gtggataaag cacgtatcat
    12061 gaaaaacgcc caccgttaaa cctgcactcc aattattgac cagttcctca ccgcgcctcc
    12121 ctctccggcg gcgcgaatga acatcttatt ggctatcaca tccgacacaa atgttgccat
    12181 cccattgctt aatcgaataa aaatcaggct acatgggtgc taaatcttta acgataacgc
    12241 cattgaggct ggtcatggcg ctcataaatc tggtatactt gccgttacac attggggctg
    12301 attctggatt cgacgggatt tgcgaaaccc aaggtgcatg ccgaggggcg gttggcctcg
    12361 taaaaagccg caaaaaatag tcgcaaacga cgaaaactac gctttagcag cttaataacc
    12421 tgcttagagc cctctctccc tagcctccgc tcttaggacg gggatcaaga gaggtcaaac
    12481 ccaaaagaga tcgcgtggaa gccctgcctg gggttgaagc gttaaaactt aatcaggcta
    12541 gtttgttagt ggcgtgtccg tccgcagctg gcaagcgaat gtaaagactg actaagcatg
    12601 tagtaccgag gacgtaggaa tttcggacgc gggttcaact cccgccagct ccaccaatca
    12661 tgattggacg gtataaggac aacaccaata aaaacaggag gttagcagtc tcagcaggac
    12721 accgaccaga cggtgaagag acataaaagg atacgcaaag gagccgcggc tcctggtgac
    12781 atgaaagccc acagatgtgg gctttttcgt tgatggtcag aacgaccagt tcacaccagc
    12841 taccccgttc cacggggatt ccacaccggc accatggcta taccccaccc caagatgccc
    12901 gcttaacgta ctgctgaatg aggctttaat acctgcctgg tatattccac gtctgcccga
    12961 caaatcattg acgaaattac cgtcactatt cactttcacc cggttatcat cgacaaattc
    13021 tttgcgcaca gccgccttca gccacggctc aacttccata ccgttcccca gacgcatgtt
    13081 gtaactcagc gttgcaccca gttcacgata taaacctgcg ggtatcgact gatttcgatt
    13141 ccatgccatt ggataaatga tattcagggt tatcagcggt gaacccccgt taacgatgca
    13201 tacggcgtca ggttccagtt accatcggta aatcgcatcc cggtttcaat gtgaccgccc
    13261 agcccgttgc tgcgataact gccgttggtg gctccaccgc tgccaaccgt ggagtcgcga
    13321 gcttcggtac ctgctaatac caataaatta ccgccatttt ccagcaacat attggtcgct
    13381 aaattgccgg aaatggaaaa agtgccgtac tggtaagtac cgctgatttc aataccgtta
    13441 gccgtgctcg tctggagagc ggcaccgctg ttctggacga tatctgtcgc tttgccatta
    13501 tcgttaactg tcagcgtacc gccttcattg atctttgttt ttattgcctc tccgttagct
    13561 gaaactgttt gtattccgcc gtcgttaatc gttgtctcat tcgccacccc ctcgacgatt
    13621 tgttcgccgc cggtgagcgt cgtgcctgtc gcagtggctt ttgttttgac gatctcccgt
    13681 ccgcccgtat tgacctgtgt tttgtcagaa gaggtgtctg actccacggt taacacgccg
    13741 ccatttgcca gcaggatatt gttcgccgca ccctgctcga tgctgaacgc gacgccatcc
    13801 gcgcgtgttc ctgtgacccg cgtcgccctg gtggttgcaa ccaaagcgcc ctggctactc
    13861 tgctgtatcc ccgttgcgct gcctttctcc cgcacatcga gtgtgccgcc gtcattaagc
    13921 accgagtttt cagccagacc gccctcatta actacctgtg aacccccatt aataatggaa
    13981 ccttccgctg tcccgtttgc cataatttgt tgtaggccag agacgatatc ggtattgatt
    14041 gccttaccat aattctgaac ggtttgcgtg ccaccattga tgtgtgtttt ctctgttgac
    14101 ccaccatcaa caatttgttc accactttcg atatttgcct cagtggctaa tccatatacc
    14161 gtttgcttgc cacctttgat atttgcttta tcagaagtgg cactggcata tattgtttgg
    14221 gtgccagcac tattgagtac agtgccaaca tcttttccat aaacatccat tttgccgttg
    14281 gcattaataa tcgtatcaac tgcccgggaa ccagtgacga ctgttaatga gccagcgttt
    14341 tccagcacta catttttagc ttctgaattc ctgatgtaga aagcatcacc ataactgttg
    14401 gttcctttga taagggttcc ggaagttgtg gaagcaatta atgcgccgcc ggattgttgc
    14461 tcaacatgct tagcctcacc accgtcctga acctccagaa cgccaccatt attaagtctg
    14521 gtggtatctg ttttagcctc cttctggaca atcagcttac cgcca
//
LOCUS       DADKRT010000104        14535 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.105, whole genome shotgun sequence.
ACCESSION   DADKRT010000104 DADKRT010000000
VERSION     DADKRT010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14535
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.105"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(95..889)
                     /locus_tag="JQ356_002662"
     CDS             complement(95..889)
                     /locus_tag="JQ356_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000832246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4622705.1"
                     /translation="MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVN
                     LAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSS
                     YPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNS
                     DDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYL
                     SGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAV"
     gene            complement(909..1412)
                     /gene="fimG"
                     /locus_tag="JQ356_002663"
     CDS             complement(909..1412)
                     /gene="fimG"
                     /locus_tag="JQ356_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimG"
                     /protein_id="HAY4622706.1"
                     /translation="MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTT
                     NATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQG
                     TAQNIQLELQDDSGNTLNTGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI
                     SITYTYS"
     gene            complement(1425..1955)
                     /gene="fimF"
                     /locus_tag="JQ356_002664"
     CDS             complement(1425..1955)
                     /gene="fimF"
                     /locus_tag="JQ356_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709916.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimF"
                     /protein_id="HAY4622707.1"
                     /translation="MRNKPFYLLCAFLWLAVSRVLAADSTITIRGYVRDNGCSVAAES
                     TNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLA
                     LENTVSAASGLGIQLLNEQQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
                     TAGHINATATFTLEYQ"
     gene            complement(1965..4601)
                     /gene="fimD"
                     /locus_tag="JQ356_002665"
                     /pseudo
     CDS             complement(1965..4601)
                     /gene="fimD"
                     /locus_tag="JQ356_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein FimD"
     gene            complement(4668..5393)
                     /gene="fimC"
                     /locus_tag="JQ356_002666"
     CDS             complement(4668..5393)
                     /gene="fimC"
                     /locus_tag="JQ356_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HAY4622708.1"
                     /translation="MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATR
                     VIYPAGQKQVQLAVTNNDENSTYLIQSWMENADGVKDGRFIVTPPLFAMKGKKENTLR
                     ILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQFAIISRIKLYYRPAKLALPP
                     DQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAG
                     SNITYRTINDYGALTPKMTGVME"
     gene            complement(5430..5969)
                     /locus_tag="JQ356_002667"
     CDS             complement(5430..5969)
                     /locus_tag="JQ356_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY4622709.1"
                     /translation="MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCR
                     IEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGK
                     NPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATG
                     RWVTGGIANAQAWFSLTYQ"
     gene            complement(6034..6582)
                     /gene="fimA"
                     /locus_tag="JQ356_002668"
     CDS             complement(6034..6582)
                     /gene="fimA"
                     /locus_tag="JQ356_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding
                     lipoprotein/fibrin-binding adhesin FimA"
                     /protein_id="HAY4622710.1"
                     /translation="MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAAC
                     AVDAGSVDQIVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAID
                     AGHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSEQTTLNNGTNTIPFQARY
                     YATGVATPGAANADATFKVQYQ"
     gene            complement(7063..7659)
                     /gene="fimE"
                     /locus_tag="JQ356_002669"
     CDS             complement(7063..7659)
                     /gene="fimE"
                     /locus_tag="JQ356_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria regulatory protein FimE"
                     /protein_id="HAY4622711.1"
                     /translation="MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISE
                     LLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTLERANWKGADRTDAI
                     FISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYL
                     GHRNIRHTVRYTASNAARFAGLWERNNLINEKLKREEV"
     gene            complement(8137..8739)
                     /gene="fimB"
                     /locus_tag="JQ356_002670"
     CDS             complement(8137..8739)
                     /gene="fimB"
                     /locus_tag="JQ356_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria regulatory protein FimB"
                     /protein_id="HAY4622712.1"
                     /translation="MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIH
                     GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTPPLLNKEVQALKNWLSIRTSYPHA
                     ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL
                     IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL"
     gene            10195..10911
                     /gene="nanC"
                     /locus_tag="JQ356_002671"
     CDS             10195..10911
                     /gene="nanC"
                     /locus_tag="JQ356_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313297.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminic acid outer membrane channel
                     NanC"
                     /protein_id="HAY4622713.1"
                     /translation="MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLK
                     VSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHF
                     SSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSSDMSRDNVHRWDGYVTYH
                     INSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGV
                     YNGRDNLSENSYRIGVSFKL"
     gene            10931..12037
                     /locus_tag="JQ356_002672"
     CDS             10931..12037
                     /locus_tag="JQ356_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate epimerase"
                     /protein_id="HAY4622714.1"
                     /translation="MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIG
                     LGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNREGLTQ
                     VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNE
                     AGKDSTAVDKINAYYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK
                     GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIF
                     AGGAGFKGSRENYQHGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW
                     NNSLLIIGGETAGGKAVTDSVLISVKDNKVTVQN"
     gene            12102..13082
                     /locus_tag="JQ356_002673"
     CDS             12102..13082
                     /locus_tag="JQ356_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HAY4622715.1"
                     /translation="MDAIISPDYYYVLTIAGQSNAMAYGEGLPLPAREDAPHPRIKQL
                     ARFAHTHPGGPSCHFNDIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARK
                     LLSFIPDNAGVLIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRT
                     RAALAKNPQNKFLGVCWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNIT
                     DAPWFCGDTTWYWKENFPHAYEAIYGNYQNNVLANIIFVDFQQQGERGLTNAPDEDPD
                     DLIMGYYGSAYRSPENWTTALRSSHFSAAARRGIISDRFVEAILQFWREK"
     gene            complement(13090..13212)
                     /locus_tag="JQ356_002674"
     CDS             complement(13090..13212)
                     /locus_tag="JQ356_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012139841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY4622716.1"
                     /translation="MISFVFLLLVCPNCHAMLHRRKPPFTPEELKALMDANKSN"
     gene            13294..14166
                     /locus_tag="JQ356_002675"
     CDS             13294..14166
                     /locus_tag="JQ356_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004186812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY4622717.1"
                     /translation="MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPR
                     LFDYGSEIYEPLHSLLERFGPQRSQYRPDMPFWRLQGDGFWQLHNAELCSTAGSSRQP
                     PVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQ
                     QIRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALEAAHIKWKQHGGPCEIPNGL
                     ALCAIHHKAFDKGSIGLDENMRVLVSDAVNGGGSVERLFWDFDGKIIALPQVRKNYPY
                     EGFVEWHRNEVFRG"
     gene            14211..14390
                     /locus_tag="JQ356_002676"
     CDS             14211..14390
                     /locus_tag="JQ356_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001153035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622718.1"
                     /translation="MQDLAASLQLAFDSGAKRVLLPISWAMDIPTVPAELFTKFQVSF
                     YSEPVDAVYKALDVN"
BASE COUNT         4077 a         3353 c         3176 g         3929 t
ORIGIN      
        1 agaagcagaa aaagcttatt atgcttccat cggaaacgat gatctggcag cctgggttca
       61 cagataaaac actctccagg aaacccgggg cggttcatac tgctcctaac gataccgtgt
      121 tattcgctgg aataatcgta ccgttgcgcg tcaactgtac gccgacgccc tgcgctggtg
      181 aaaacgacgc ggtattggtg aaaatcgagt tgcccgcatc tgcggttgtg ccggagaggt
      241 aataccccag gttttggctt ttcgcacaat aaacggtaag aggaattggc actgaaccag
      301 ggtagtccgg cagagtaacg gtgacatcac gagcagaaac atcgcagccg ccagtaggca
      361 ccaccacatc attattggcg taaatattcc acacaaactg gaaatcatcg ctgttatagt
      421 tgttggtctg tcgcaaaata agcacggcaa ttaatgagcc agctttaatc gccaccccgc
      481 ccgcactgct cacaggcgtc aaataaagcg ccaccggcca cggcttatcc gttctcgaat
      541 tataaacaac ccgcggcgtt tcgctggtgg tcggaaatgg atagctactg ccactatatt
      601 ttacggtccc ggaaaaatta gataacacgc cgccataagc cgagcctcgt tgcagtgtga
      661 catagtctgt aatggtttcc ggataatcgt tatggcaaaa gatttgcgtc gaaagatcta
      721 cgaccaggtt ttgccccaca ttcacgacag gcgcaaggtt tacataaaca ttagcgctgc
      781 caccgccaat agggatagca gtaccattgg cggttttaca ggcgaatgac caggcattta
      841 ccgaccagcc catcagcagt acagcaaaca gggtaataac tcgtttcatt acaattatct
      901 cttcgggttc agctgtaggt ataggtgatg ctaatcactg cctgaatggt tccctgagtg
      961 gctccgccat ttaccgtcaa tgctctgacc tgtaacggga agtgcgctga ttgtgaggaa
     1021 tcatccacct gaactgtttt ggtttcgcca gtattcaatg tgttgccact gtcatcctgt
     1081 agctctaact ggatgttttg cgcggtcccc tggtttttat aatatccggt actgtcggct
     1141 gccccgctga agctggcagt gaccctcgac gttcccaccg gacaattagt caactcaagc
     1201 gcaacatcat gccaggccga tgccgccccg gcagacatca gactgaaaga ataaagatcg
     1261 ccgagatcaa ccgtggcatt ggtggtggaa actgtgcacg gtttggcgac gaccttaccg
     1321 ttcaccgtga tggtgacatc ggctgcctgt attgtcgcac ttgcgagcgc caatattgcc
     1381 gccaataaat acccacgttt gcgccatttc atgagcatct ccagttactg atattcaaga
     1441 gtgaaggtag ccgtggcatt gatatgcccc gcagtgacag gcacctgtgt cgccattagc
     1501 cgggcgtaaa aattcaacgt atttggttta cccggcgtca gggtcgtcca cgaaatcgcg
     1561 gacgatggag cattaagggg tatctgattt tgctgctcat tcagaagctg tattcccagt
     1621 cccgaagccg ctgacaccgt attttcaagt gcaagcaggt tggcattgtg gctatctgca
     1681 acgccggtaa acccaacctt tacggcagaa acggcgttac cacagggtga cagcaaaata
     1741 cgaaatggaa cgacaggagt cgttgcgcca atgttgttaa attgcttcgc cgcgttttcc
     1801 atcagatcaa cagtaaaatt ggttgattca gcggccacac tacagccgtt atctctgaca
     1861 tagccgcgga tagtaatcgt gctatccgca gccaaaacgc gacttaccgc cagccacaaa
     1921 aaagcgcaca gaagataaaa aggtttgttt ctcatcacgc ccccttaacg acattcagct
     1981 gatagctggg ttaataactg ctgctgactc tctggtggca gttgataatt ggcgatacag
     2041 tgagcatttt cctcttctcc ccatttcacc tgaacttttc ccgctaaagg cattccgctg
     2101 aggtaaacct gaccattatc cgcaacaatg ccgctactct ggctactctc tgatgtcacc
     2161 atcgccccaa acggcagcgg cttattattg tgggttagcg tcatgagcag ttttatccca
     2221 acgcgcgctt taaactctgc tcgcacgatc gccccacgag tgggaacaac gttagcgacc
     2281 gcgttatcta aatcgacgtt atcagccagg gtattggtat ccagcgccac tctgttttcc
     2341 cgatattcgg tggcataagg cagcacggca taaccgcgcc agtcggtacg cacccccgtc
     2401 tggttttcga cttttgcatc ttttgcgcca ggcgctttaa caagtaccac cgtatcgttt
     2461 aacggctgcc ccagcgttac gccattggca tgagccagta ccccaccgct gactccgtaa
     2521 tagagctgct taatatcatc gctatggctg taaccgatat tggcattgcc gtaaccaccg
     2581 cgataattca gcgtggcgta gcctgtactt ccgctattac catcgcctcc cccggcatag
     2641 ccggtttgca cgctatagct gaggttgttg tcttccagca acgtaccgta tacaccagcc
     2701 agattggtca tccgaccgtt gagatcgtgt gacacgctgt agctggcact ggcatgtcgc
     2761 cactgagatt tactgtcaga acgcagccag tggctgaaag gaatattgac gttaagcgct
     2821 aacatctgat cccgcccttt ttgccaggcg tttttcgtca ggctatagct gagcgtccag
     2881 ttgatatctt cgaacgcagt atttaatcca gcctagaatt gctcatcgac attactcgtt
     2941 ccccaataag tttgatggct accactcaaa tacagtgttg atgtgcgccc gagttgctga
     3001 gtaacggtga gctgtaattt cccgcgtttg ttataagcga ggttgtaata gtcggtgaat
     3061 ttcggcttaa cctgaataac tccatcctgt gtttcgatgt tgtagccatt cattcgactg
     3121 tatgttgtat cagcgaaatt aaaatatccg ctggtcgaat aacggtaacc cactaactga
     3181 atattcgtgc ctgactcatt gagcgatttg ttatagagaa aacgcaccga ttgtccgtca
     3241 tgctgactgt catcgggaag tgtggaatta gcctgcgtca tatccacaga cagagcgccc
     3301 agtgccccca tgtttttccc gataccgaaa ttaaaagcac gataacgatc cgccagttgc
     3361 gttccaccat atattgtcca gccagccgga aggccgtgga gtaatgtact ttggaaaaag
     3421 cggggttttt cctgctgcgt atttccacta cggtattctc ctgccgtaat ggaataacga
     3481 gtatgccctt cacgttgcaa aagcgggact gacgaatagg gtacggtaaa aatctgcgtg
     3541 ctgccgtcag cctctttgat cgttacctgc aagtcaccac tattacctgc ggcatagata
     3601 tcgttgatgg taaaaggccc cggtggcacc gtactattat aaatgtcata cccattttgt
     3661 ttaatagtga cctgtgcagt accacgagca ataccgtgga tcaccggggc aaatcctctt
     3721 tggctatcgg gtaacatatt gtcatctgag gccaattgtg cgccgcgaaa gttaatacca
     3781 tcgaaaatat cgccctgggt ataaccatca cccagcgtca gccgggaacg taacggtatt
     3841 atgtctcgct caagccaggt attgatatgc tgccatttat ttttgctacc tgatgatctg
     3901 tcgctactgt tataactcca gctggtattg tcgcgtaaac accacgcacc aatatttaac
     3961 ccactctgta ggtttaaata tgcataatgg ctgttacccc caatctgatt ctgtacacta
     4021 tttccgctga aattataatt gagcaatccg gcattaatac cgggatccca taactcagga
     4081 ggaatataac cacgcgcgcg attactcata aatgcctgag ggatcgtcag gttcagtcgc
     4141 tgctgaccaa catccagatg cgcagtagcg tcatggatca ttgaggttaa tggcacgcag
     4201 gcatcatctg ccagcagatt cataccggag acagaagccg cattcagccc catactggca
     4261 agttgcgcgc gtgtcaggca gggaacaatc ccttgttcac tgtcgcccgt attaaatgtg
     4321 acatcacgcg ttgccatata accattattc aaatagatat cgacgcgata cgtccctggc
     4381 ggtaattctt gcccattttc aaaacgcgat aaatcggcca cagcctgggg atcatccgct
     4441 aaaaagcgcg gattaaaata gagttcggca gatgacaaag gtgcctgtgc ggcaaaagca
     4501 caggcgacaa cgagccggac aaaaaaacca gccaaacgat gcttacgaat atgcaagcat
     4561 tgtgtgtttc gctggtaaag tcttaaattc agatatgaca ttattcctcc ggtttaaaat
     4621 tacccggcag tcaattcttt ttattcaggc gagaaattcc ccctgcgtta ttccattacg
     4681 cccgtcattt tgggggtaag tgcgccataa tcatttattg ttcggtaagt aatattgctt
     4741 cctgcatcag aaggcaattt aaccgtgctt tcgcccattg gaggcaccaa tgcattttca
     4801 agaacccggg ttccggcatt caactctgtt accgtcagat aatagggtgt cgggttaatc
     4861 agcgtcagag aattcgcgct acgacgaaat cttaattttt ctgcggcctg atcgggtggc
     4921 aacgctaatt tagccgggcg atagtacagt ttaatgcggc tgataattgc gaactgtagc
     4981 gtattctcag tcaattttga tttatccatt gacggaatcg ctttaacatt catccagaat
     5041 aaactttccc ggtcctgtgg caattggtta tttgttgcat caagaatacg caaggtattc
     5101 tctttttttc ccttcatcgc aaacagagga ggcgtcacga taaaacgacc atcctttaca
     5161 ccatcggcat tttccatcca tgattgaatt aaataggtac tattttcatc attatttgtc
     5221 acggcaagtt gcacttgttt ttgccctgcc ggataaatta cgcgagtcgc acctaaggcc
     5281 actcccgctt cagcgcgtcc ggcaaccatc attgccatga acatcaggat acctgccagc
     5341 aagcagaatg ttatttcctg cgatttcctt acattggcgt ttttattact cactgtcctg
     5401 ttcctgttat cacattatct gctgaacaat tactgatagg ttaaagagaa ccaggcctgg
     5461 gcattggcga tgccgccagt aacccaacgc ccggtagcac gatatttggc gatgaaatgt
     5521 agcgaagtag agcctgagta aagccgtttc cagtttactg gaggacgatt aatcggtacg
     5581 aggtttcctt catcatcaaa caacgctacg ccaatattgg tggctatccc tggcccctct
     5641 cccacggaaa gcacatccgg atttttacca tccgcgacac cgtgaaacgc cacacccaca
     5701 cgttcactca ccaccgtgct acattcccgt aaatgaataa caaaaggcac cggtgcgcta
     5761 tcttccccta ccgcatgaaa ccggttactg ctgatttgcc ccatattgac cgtcatttgt
     5821 ttatcaccgg cttcaatccg gcaagtttcc gcaataatga cgccctgaaa ttgcatattt
     5881 ccgccgggca gcgtagtatt ccatttattt ccggccagag caaacattgg cagcaacgac
     5941 gctaatagaa ataatctctt ccttttcatc gttattttta tcgcacaagg gtgggcatcc
     6001 ctgcccgtaa tgacgtccct gaacctgggt aggttattga tactgaacct tgaaggtcgc
     6061 atccgcatta gctgcgccag gggttgcgac accggttgca taataacgcg cctggaacgg
     6121 aatggtgtta gtaccgttat tcagggttgt ttgctcactg aatgtcgcac catccagcgt
     6181 cagcgcagca cccgttctgt ccaggatctg tacaccaacg tttgttgcgc tacccgcagc
     6241 tgaactctgc agagccagaa cgttggtatg acccgcatca atcgccgtac ctaaaaaggc
     6301 aactgcggct ttagatgcaa cattggtatc gcaatcattc agctgaatgt taaaaccgac
     6361 agcagaactg gttgctcctt cctgtgccag cgatgcggta cgaacctgtc ctaactgaac
     6421 gatttgatca acagagcctg catcaactgc gcaagcggcg ttaacaactt cccctttaaa
     6481 gtgaacggtc ccaccattaa ccgtcgtggc agcggccaga gccgctgtag aactgaggga
     6541 cagagccgac agaacaacga ttgccagagt tttaattttc atgctgcttt cctttaaaaa
     6601 aactatttct aaatcgacat gggcagtcgt tctgtacact ttgttttgtc aacgagtttg
     6661 actgccaaca ctgcacagtt ttcccccaaa agatgaaaca tttggggcca ttttgactca
     6721 tagaggaaag catcgcgcac aaactttttc agtttatttg ttggcttaat attctattgt
     6781 tatctttatt tatagatttt tatattgcat gaggtggttt ttggagagaa gaatgaggaa
     6841 gatgcgtcga gccacagaaa cgttagcttt acatatagcg gaggtgatgt gaaattaatt
     6901 tacaagagaa ataatttaca tatcaaacag ttagatgatt tttgtcgttt tttaaaattt
     6961 ttatgcttga gaaaaaatac gtaacttatt tatgatatgg acaatttggc cccaattgtc
     7021 ttgtatttat ttatttttta actttattat caataagtta attcaaacct cttctctttt
     7081 taatttttcg tttatgagat tatttctttc ccataatccg gcaaaacgag cagcattact
     7141 ggcggtataa cgtacagtat ggcgaatatt tcgatgcccg agataatcct gaattaaacg
     7201 agtatctgca ccacgctccg ccagttcata accgcaagca tgccttaaca tatgaggatg
     7261 agtctgcgtt acggttccag cttcaatacc ggcatcacga ataatgcgat aggcctgctg
     7321 gcgagaaagc cgactcccgc ggcgagaaat aaatatggcg tcggtccggt cagcgccttt
     7381 ccagttagca cgttccaggg tccagcgttc cacagcttca cgctcatcaa aacgtaacgg
     7441 gtgaacggta gaaaatccgt tcttcagtcg gcgaatattt attcgacctt cattaaggtc
     7501 aagatcctga taatgcagat caagcagttc actaatacgc atcccatgcc gatatgccaa
     7561 cagaataaga caataatctc tggctcccgt tgccccgtaa caaaccgcct gcatcatggc
     7621 ctgaacttct ttaccggtaa gataacgacg tttactcaca atagtagtac tcctaactga
     7681 gatatatttg aatgaatacc tataggaaac ctcaatcggt caaaattagc ccaatagata
     7741 aaaagataac cacacacgaa gtgatgtggc tatcagtcaa ttacattaaa tatcatacaa
     7801 aaataaaata tcactgatgt gacaacatct attttcattg atttgattca atataacaat
     7861 agattgtagt agattagctt ccagttgctt aaaaaataaa gaaaaaagtg cgaaaacagg
     7921 agaatttaag tgatgtgtaa atttatgaat gattttgttt atttattttg aagaacataa
     7981 accattgtat tttgtatgga tatggttaac ttaatgctta ttatgataat taagaattat
     8041 acttacaata acatcaatta ataaatggtt aatcattttt gatatatcgt aagaataatg
     8101 tagtttttaa caccatccct ggtatctcaa ctatctctat aaaacagcgt gacgctgtcg
     8161 tcctctggct ctatcccaga tgccgtaaaa acgccctgca ttgctggcgg tataccagac
     8221 agtatgacga atattgcgat gcccaagata atcctggata agtcgcgtat ctattcccat
     8281 attcgccaaa gcaaaaccac acgaatggcg taacatgtgc ggatgaatct ccagtgacaa
     8341 cccggcatta ccaccggaag tcgagataat atggtaaaac tgttgccgag aaagcggatt
     8401 ccccttacgc gataaaaata cccactcgct ctcagcatgc gggtacgaag tacggatact
     8461 caaccagttt tttaaagcct gaacttcttt attcaatagc gggggcgttg ttgaaaagcc
     8521 tttttttaat cgatggatat atatacactt tgccttaaga tcaatatccg aaatcctcaa
     8581 tcgacaaatt tcactcgccc ggaaaccatg aataaaacaa agcaaagtca gacaataatt
     8641 acgtgctgca tgaggcccgg tatttgctgc tttaaggagt gattcgattt cactatgggt
     8701 caggaagttc ctttttttgt tatcagcctt attcttcatc gtttttccct tataattaca
     8761 gacgcgcact agctgtgctg ggttagcaat aatccaacat ttttatcctg attatgttta
     8821 taaaagcgaa cgtttgctta ataactaacg taagtggacc agttcttctg agtgaactta
     8881 aatggggtag caacagttaa ttataataac gttgccatac aaacgctatg ctcttgcatg
     8941 ctatgtacct ttatatattt atcaatcgga tacgaatcta ataatacccc tcatcattaa
     9001 tgcaactaat cttatctata tatcatgtga tatgttctgt aacaagtaaa atcagcataa
     9061 aaaattcagc aaaatttaat attcgttcaa ctagccgtct cacatatgac attattagtc
     9121 aactccattt gccacaaaat ggctatttca tggaacgcag taatttctta gtggctatta
     9181 tcatgctaat tcttaggtcc ctagcgatta ttcctggctg attcgtcagc ttacgccatg
     9241 agattgttac attccttttt atcctggaga tatgggggaa cgcaggagat gattttttca
     9301 tctacattcg ttggtaaata tagctttggt cactacgact taaaccttcc tcaatcacag
     9361 ccattcgccg ggcgatacgg caaacaaact aagtgaaaca tcatcctgaa aacaccaaca
     9421 tcaacaagcc tctccagatc gacttcagaa gtgaccagtt acaagccaca aaccaggaaa
     9481 catatttcat gatgagaatt atgctcagcc tgatggcggg taaacactga ttttcaccaa
     9541 gctcactgag ttagcttgca aagcttccct tgtttagact ccaaataaat tatttataaa
     9601 acaaacattt aaacaaagat ctttagtttt tgaagaccac cgcaagtgtt cgtctggctt
     9661 cacatggcat cttcctctta gaaaaagatc gacatatttt gtgacacgaa ttgcaaatct
     9721 ggttttgttg tatggattgc gtgatttttg atctggtata acaggtataa aggtgcacca
     9781 agatagtcaa tgagacaggg catctcgcaa tctatggcaa acatcacttc agttctttct
     9841 catcgggtga tgaaaacgca cttcagtctg aaaggaatat gaaaatgaga tcaacagaca
     9901 ctctatttta tgactctggg taaaatggat tgagtaagtg atatagctta cgaaaattca
     9961 aatcaattaa acatcagaag agattttata ctcaggtatt taatctggat ctctgtttat
    10021 ttaaataatg tgaaaagaga tttttcacag gagaccttat acaaaaaaat ataaaataca
    10081 gctaccggtt gccaaagaca ctataagcct ggcaaaaaat attacacaac ataaatgcta
    10141 attgtttatg cgggctttgt attgctttct gtatcctaca aatgagtgaa atttatgaaa
    10201 aaggctaaaa tactttctgg cgtattatta ctgtgctttt cgtccccatt aatttctcag
    10261 gctgcgacac tggacgtacg tggtggatat cgtagtggaa gccacgccta tgagactcga
    10321 ctcaaagtca gtgagggatg gcaaaatgga tggtgggcaa gcatggaaag taatacctgg
    10381 aataccattc atgataataa aaaggaaaat gccgcactca atgatgttca ggttgaagtt
    10441 aattacgcga ttaaacttga tgatcaatgg acggtgcgcc cgggaatgtt aacgcatttt
    10501 agcagcaacg gcacacgcta cggaccctac gtaaaactgt cctgggacgc gacaaaagat
    10561 cttaattttg gcattcgcta tcgttacgac tggaaagctt accgacaaca agacttatcc
    10621 agtgatatgt ctcgtgataa cgttcatcgt tgggatggat atgtcactta ccatattaat
    10681 agtgatttca ccttcgcatg gcaaacgacg ctatacagca aacagaacga ttatcgctat
    10741 gcaaaccata agaaatgggc gacggaaaat gcatttgttc tacaatacca tatgacgccc
    10801 gatattacgc catacataga atatgactac cttgaccgtc agggtgttta caacggcaga
    10861 gataatttat cggaaaacag ttatcgcatt ggtgtgtcat ttaaactgta gtagacagga
    10921 gacagtcaca atgaataaaa caataacggc gcttgctatc atgatggctt catttgccgc
    10981 aaacgcgtct gtattaccgg aaactcctgt gccatttaaa agtggtaccg gagcaattga
    11041 taacgacact gtctacattg gtttaggtag cgcaggtacg gcatggtaca agctggatac
    11101 acaggccaaa gataaaaaat ggacagcgtt agctgcattc cctggtggac caagagatca
    11161 agcaacctct gcatttattg atggcaatct gtatgtgttt ggcggcattg gcaaaaacag
    11221 agagggcttg actcaggtat ttaatgacgt acacaaatac aaccccaaaa ccaatagctg
    11281 ggttaaattg atgtcgcacg caccgatggg catggcgggt catgtgactt ttgtacacaa
    11341 cggcaaggct tatgttactg gcggtgttaa ccagaatatc ttcaatggct attttgaaga
    11401 tctcaacgag gctggaaaag attcaaccgc tgtagataaa atcaatgcct actattttga
    11461 caaaaaagca gaagattatt tcttcaataa gtttctgttg tcttttgatc cctcaacaca
    11521 gcaatggagt tacgctggcg aatcgccctg gtacggaacg gctggtgcgg cggttgtgaa
    11581 taaaggtgat aaaacctggc ttattaatgg cgaagccaaa cccggattgc gaacggatgc
    11641 cgtatttgaa cttgatttca ccggtaataa tttaaaatgg aataagcttg ctcccgtctc
    11701 atcaccagat ggcgtcgctg gcggttttgc ggggataagc aatgattctc ttatatttgc
    11761 cggaggggcc ggattcaaag gttcacgaga aaattaccag cacggaaaga actatgcgca
    11821 tgaaggcctg aaaaaatcat atagcactga tattcatctt tggcataacg ggaaatggga
    11881 taaatcgggt gaattatcgc aaggtcgggc ctacggagta tcattgccct ggaataatag
    11941 tctattgatt attggcggtg aaactgcagg cggcaaagcg gtgacggatt cagttttgat
    12001 ctctgtgaag gataataaag tcacagtaca aaactaacgc ttcagggccc cagtaaaggg
    12061 gccctgctat caatttatca tttcaattac gcgaaaatta tatggacgca ataatatcgc
    12121 ccgattatta ctatgttctt accattgctg gtcagtctaa tgctatggcg tatggcgaag
    12181 gactgccatt accggccagg gaagatgcgc ctcatcccag aattaaacaa ttagcgagat
    12241 ttgcgcatac gcatcccgga ggcccgtcat gtcactttaa cgacattatt ccactaactc
    12301 actgcccaca cgatgttcag gatatgcagg gttatcacca tcctctggca acgaatcatc
    12361 aaacacagta cggcaccgtt ggccaggcac tgcatattgc acggaaatta ctgtccttta
    12421 ttcctgataa cgcaggggtt ctcatcgttc cgtgttgccg tggcggatcg gcttttaccg
    12481 cgggcagcga agggacatat tcagaacggc acggagccag ccatgatgct tgtcgttggg
    12541 gaacggatac tccgctatac caggatttag tcagcagaac gcgagccgca ctggcaaaaa
    12601 atccgcagaa caaattcctc ggcgtatgct ggatgcaagg cgaatttgac ttaatgacca
    12661 gtgactacgc gtcacaccct caacacttta atcatatggt tgaagccttt cgtagggatc
    12721 taaaacaata ccattctcag cttaataata ttactgacgc gccgtggttt tgcggcgata
    12781 ccacctggta ctggaaagaa aatttccctc atgcgtatga agctatttat ggcaattatc
    12841 aaaataatgt tttagctaat attattttcg tcgacttcca gcaacaaggt gaaagaggac
    12901 tgacgaacgc gcctgatgaa gacccggacg atttaatcat gggatattac ggttcagcgt
    12961 accgctcacc ggagaactgg acgacggcac tgcgaagcag tcatttcagc gcggcagccc
    13021 gtcgggggat tatttctgac aggtttgtag aagcaatttt gcagttttgg cgcgaaaagt
    13081 gagcgttcat taatttgatt tattcgcatc catcaacgct tttaactcct ccggcgtaaa
    13141 cggtggtttg cgtcggtgca acatcgcatg gcaattaggg cacacaagca gcaaaaaaac
    13201 aaatgagatc aaggtaatat atcttcactt gcaggcttga acagcagaaa atttgcgagc
    13261 atgatcgcaa ttatttcact gctagggata tcaatggctt ccagtaaatc gctacagcag
    13321 gcaattgcca atataaaaat ctggcataag ggtgaacagc gcgcaccgca taaaccattg
    13381 ttattgctat acgtattagc gggatacctg aatggacatc cacgcctttt cgattatgga
    13441 tcggaaatct acgaacctct gcacagttta ctggaacgtt ttgggccaca gcgttcacag
    13501 taccgacctg atatgccgtt ctggcgatta caaggcgacg gattctggca attacacaat
    13561 gccgagcttt gctcaacagc agggagcagc cgacaaccgc cagtgaagga actgaacgaa
    13621 taccacgttg caggcggttt cgatgaacag cactacgccc tggtaaccgg caataaaaaa
    13681 ctcatcaata ctctagcgca acagatactc gaagcgcact tcaccgagag tattcaggaa
    13741 gaaattgctg acgagctggg ttttgatctc cagcaaatcc gtaaacagcg cgacccgtta
    13801 tttcgcaaaa atgtattacg cgcttataac taccagtgcg cgatatgtgg ctttaatatg
    13861 cgccacgacg acaccaccgt cgcgctggaa gcggcgcata taaaatggaa acagcacggc
    13921 ggtccttgtg aaattcctaa tggcctggcg ctttgcgcaa ttcaccataa agcctttgat
    13981 aaaggatcga ttggcctgga cgaaaatatg cgggtactgg tatcagatgc agtaaacggc
    14041 ggagggagcg ttgagagatt attctgggat tttgacggga aaattattgc gttgccgcag
    14101 gtgcgtaaaa attaccctta tgaggggttt gtggagtggc atcggaatga ggtttttagg
    14161 gggtgaggtt gataactatc gcagtatgtt caatattgct gacataatca gtgcaggatc
    14221 ttgccgctag tttacaactc gccttcgata gcggcgcaaa acgagttctg ttgccgatat
    14281 cctgggctat ggatattcca acagttccgg cagagttgtt taccaagttt caggtaagtt
    14341 tttactcaga accggttgat gcggtttata aggcgctgga tgtgaattaa cacattcctc
    14401 agcttattta caaaaggatt attcccattt gatataatat cagtgccaat ttactttttt
    14461 caatggaata tatctcggct aaataacaat aaaacttatc gctaatggat taaataaaca
    14521 attttctaat tcatt
//
LOCUS       DADKRT010000105        14485 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.106, whole genome shotgun sequence.
ACCESSION   DADKRT010000105 DADKRT010000000
VERSION     DADKRT010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14485
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.106"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..134)
                     /locus_tag="JQ356_002677"
     CDS             complement(<1..134)
                     /locus_tag="JQ356_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY4622719.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     R"
     gene            complement(205..2319)
                     /gene="fusA"
                     /locus_tag="JQ356_002678"
     CDS             complement(205..2319)
                     /gene="fusA"
                     /locus_tag="JQ356_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HAY4622720.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT
                     RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
                     HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
                     AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDEAPSNVAQAVIEARGK"
     gene            complement(2416..2886)
                     /gene="rpsG"
                     /locus_tag="JQ356_002679"
     CDS             complement(2416..2886)
                     /gene="rpsG"
                     /locus_tag="JQ356_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006714698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HAY4622721.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(2983..3357)
                     /gene="rpsL"
                     /locus_tag="JQ356_002680"
     CDS             complement(2983..3357)
                     /gene="rpsL"
                     /locus_tag="JQ356_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003852912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HAY4622722.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3483..3770)
                     /gene="tusB"
                     /locus_tag="JQ356_002681"
     CDS             complement(3483..3770)
                     /gene="tusB"
                     /locus_tag="JQ356_002681"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HAY4622723.1"
                     /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
                     ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
     gene            complement(3778..4137)
                     /gene="tusC"
                     /locus_tag="JQ356_002682"
     CDS             complement(3778..4137)
                     /gene="tusC"
                     /locus_tag="JQ356_002682"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HAY4622724.1"
                     /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
                     FQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
                     ADALRRELANYDVILRF"
     gene            complement(4137..4523)
                     /gene="tusD"
                     /locus_tag="JQ356_002683"
     CDS             complement(4137..4523)
                     /gene="tusD"
                     /locus_tag="JQ356_002683"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HAY4622725.1"
                     /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYRGGV
                     YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4523..5245)
                     /locus_tag="JQ356_002684"
     CDS             complement(4523..5245)
                     /locus_tag="JQ356_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY4622726.1"
                     /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVQNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5412..6224)
                     /gene="fkpA"
                     /locus_tag="JQ356_002685"
     CDS             complement(5412..6224)
                     /gene="fkpA"
                     /locus_tag="JQ356_002685"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003827768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY4622727.1"
                     /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
                     DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
                     QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
                     IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
     gene            6445..6663
                     /locus_tag="JQ356_002686"
     CDS             6445..6663
                     /locus_tag="JQ356_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HAY4622728.1"
                     /translation="MQDLSLEARLAELESRLAFQESTIEELNVTVTAHEMEMAKLRDH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(6712..7302)
                     /gene="slyD"
                     /locus_tag="JQ356_002687"
     CDS             complement(6712..7302)
                     /gene="slyD"
                     /locus_tag="JQ356_002687"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY4622729.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
     gene            complement(7397..7597)
                     /locus_tag="JQ356_002688"
     CDS             complement(7397..7597)
                     /locus_tag="JQ356_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HAY4622730.1"
                     /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
                     ADKEARDHVRKDEQVIGIFHPD"
     gene            complement(7607..9419)
                     /gene="kefB"
                     /locus_tag="JQ356_002689"
                     /pseudo
     CDS             complement(7607..9419)
                     /gene="kefB"
                     /locus_tag="JQ356_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417809.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
     gene            complement(9419..9970)
                     /gene="kefG"
                     /locus_tag="JQ356_002690"
     CDS             complement(9419..9970)
                     /gene="kefG"
                     /locus_tag="JQ356_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HAY4622731.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
                     PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
                     KYWRNVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
                     KELANHARAYGDWLANPLSPGGR"
     gene            10101..12014
                     /locus_tag="JQ356_002691"
     CDS             10101..12014
                     /locus_tag="JQ356_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY4622732.1"
                     /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADGGSYTFPGSWQLAWVNQETPALSQAALEYVIDGDREYRQLEAQLHDAN
                     ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
                     IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
                     SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
                     DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
                     LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
                     EQLEQMLLEGQSN"
     gene            12014..13036
                     /locus_tag="JQ356_002692"
     CDS             12014..13036
                     /locus_tag="JQ356_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY4622733.1"
                     /translation="MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFT
                     PYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHGLEGSLNSPYAHGLVEAAQKRGW
                     LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
                     CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY
                     PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
                     AKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
                     LEAKSC"
     gene            13030..13248
                     /locus_tag="JQ356_002693"
     CDS             13030..13248
                     /locus_tag="JQ356_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HAY4622734.1"
                     /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
                     QLQCGEAVLVWSELHETVNIMPRSQFRE"
     gene            13302..14171
                     /locus_tag="JQ356_002694"
     CDS             13302..14171
                     /locus_tag="JQ356_002694"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HAY4622735.1"
                     /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
                     HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
                     EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
                     WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
                     AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
                     PLVQRLMEGKKIE"
     gene            complement(14226..>14485)
                     /locus_tag="JQ356_002695"
     CDS             complement(14226..>14485)
                     /locus_tag="JQ356_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HAY4622736.1"
                     /translation="IDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTG
                     RDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
BASE COUNT         3581 a         3955 c         3567 g         3382 t
ORIGIN      
        1 cgagcagcac cgccgtaggt tttagccagt acggtggtga ttgcagcggt cagagtagtt
       61 ttaccgtggt caacgtggcc gatagtacca acgttaacgt gcggttttgt acgttcaaat
      121 ttttctttag acacggctat attccttact atagtgctct ccccttcagg agagagcacg
      181 ggactttggt attaaccctt aggcttattt accacgggct tcaattacgg cctgagcaac
      241 gttactcggc gcttcatcat acttcaggaa ttccatagtg tatgatgcac gacctttggt
      301 cagagaacgc agctgagttg cgtatccgaa catttcagac agcggtactt cagcgtggat
      361 cttaacgcca gtaacttcag attcctgacc tttgagcata ccacgacgac ggctcaagtc
      421 accgataacg tcaccggtgt tctcttccgg agtttctact tcaaccttca tgatcggctc
      481 aagcagaact ggtttcgctt tcttaaagcc ttctttaaag gcgatagaag cagccagttt
      541 aaacgccagt tcagaggagt caacgtcatg gtaagaaccg aagtgcagac gaatacccat
      601 gtctactacc gggtagcctg ccagcggacc tgctttcagc tgttcctgga tacctttatc
      661 aacggccggg atgtattcgc cagggattac accaccttta atgtcgttga tgaactcgta
      721 gcctttcggg tttgaacccg gctccagcgg gtacatgtcg ataacaacat gaccatactg
      781 accacgacca ccagactgtt tcgcgtgttt accttcaaca tcggtaactt tctggcggat
      841 agtttcacgg taagcaacct gcggtttacc tacgttcgct tcaacgttga attcacgctt
      901 catacggtca acgatgatgt cgaggtgcag ttcgcccata cccgcgatga ttgtctggtt
      961 agattcttcg tcagtccata cacggaaaga cgggtcttct ttagccagac ggcccagagc
     1021 cagacccatt ttttcctggt cagctttggt tttcggttca actgcgatgg agattaccgg
     1081 ctcagggaat tccatacgtt ccagaatgat cggcgcatcc gggtcacaca gggtgtcacc
     1141 agtggttacg tctttcagac cgatagcagc agcgatgtcg cccgcgcgaa cttctttgat
     1201 ctcttcacgt ttgttagcgt gcatctgaac gatacgaccg aaacgctcac gtgcagcttt
     1261 cacggagttc agtacggtat caccagagtt aaccacaccg gagtaaacac ggaagaaggt
     1321 caggttacca acaaacgggt cggtagcgat tttgaacgcc agtgcagaga acggctcgtc
     1381 atcacttgcg tgacgttcag ccggagtgtc tttaccgtcg tccaggatac cgttgatcgc
     1441 aggtacgtca accggggatg gcaggtaatc aattaccgca tccagcatcg cctgaacacc
     1501 tttgttcttg aacgcagaac cacaggttac caggatgatt tcgttgttca gaacgcgctg
     1561 acgcagagca cctttgattt ctgcttcagt cagttcttca ccacccaggt atttttccat
     1621 cagctcttca gaagcttcag ctgcggattc gatcaggttc tggtgccatt cgttagccag
     1681 ttcaaccatg tctgccggga tatcttcgta ttcgaaggtt acgccctggt cagcgtcgtt
     1741 ccagttaata gctttcattt tcaccaggtc aacaacaccg gtgaaatgtt cttcagcacc
     1801 aatcgccagc tgcagcggaa ccggattcgc gcccagacgg gttttgatct ggttaacaac
     1861 tttcaggaag ttcgcaccca tgcggtccat tttgttaacg aacgcaatgc gcggaacttt
     1921 atatttgttt gcctgacgcc atacggtttc agactgcggc tgaacaccac caactgcgca
     1981 gtaaaccatt accgcaccat cgagaacacg catggaacgt tctacttcga ttgtgaagtc
     2041 aacgtgcccc ggggtgtcga tgatgttgat gcgatgcggc tcatactgct tagccatacc
     2101 agaccagaat gcagtagtcg cagcggaagt gatggtaata ccacgttcct gctcctgctc
     2161 catccagtcc atggttgcag cgccgtcatg aacttcacct attttatggt ttacaccggt
     2221 gtagaacaga atacgttcgg tagtagtggt tttaccggcg tcgatgtgcg cactgatacc
     2281 gatgttacgg tagcgtgcga tgggtgttgt acgagccatt tgtttcctcg tttatctttt
     2341 aggcgttcaa tttaagtagc ccaaagcggg ctgcttactg gaagcgcccg cctggtgact
     2401 aaaactccga agggattacc aacggtagtg tgcgaacgcc ttgttggctt cggccatacg
     2461 gtgaacgtct tcacgtttct taactgcagt acctttgttt tctgcagcat cagaaagttc
     2521 gttcgccagg cgcagagcca tggatttatc accgcgttta cgagcagctt caacgatcca
     2581 acgcattgcc agagcattac gacgaaccgg acggacttca actggtacct gataagtaga
     2641 accaccaacg cggcgagact taacttctac agtcgggcgc acgttttcga gagctacttc
     2701 gaatgcttcc agttcagatt taccagagcg ctgagccagg gtctccagcg cgctgtatac
     2761 gatagattca gcagtagatt ttttaccatc taccatcagg atatttacaa atttagccag
     2821 cagttctgat ccgaacttcg gatccggcag aattttacgc tgaccaatga cgcgacgacg
     2881 tggcatggaa atactccgtt gttaattcag gattgtccaa aactctacga gtttagtttg
     2941 acatttaagt taaaacgttt ggccttactt aacggagaac cattaagcct taggacgctt
     3001 cacgccatac ttggaacgag cctgcttacg gtctttaacg ccggagcagt caagcgcacc
     3061 acgtacggtg tggtaacgaa cacccgggag gtctttaaca cgaccgccac ggatcaggat
     3121 cacggagtgc tcctgcaggt tgtgaccttc accaccgatg taggaagtca cttcgaaacc
     3181 gttagtcaga cgaacacggc atactttacg cagcgcggag ttcggttttt taggagtggt
     3241 agtatataca cgagtacata cgccacgttt ttgcgggcat gcttccagcg caggcacgtt
     3301 gcttttcgca actttgcgag cacgtggttt gcgtaccagc tggttaactg ttgccattaa
     3361 atagctcctg gttttagctt ttgcttcgta aacacgtaat aaaacgtcct cacacaatat
     3421 gaggacgccg aattttaggg cgatgccgaa aaggtgtcaa gaaatataca acgatcccgc
     3481 catcaccagg ccatctggct ggagtgctta accgtaagtc tgacgaaatc agtatagtca
     3541 atgggaatga tgtcgttcga aatttgacca gtcaaaccgc gggcaataag gtcttcgttc
     3601 agggcataga ccttaatggg ggcattacgc agactttcaa ggtagcggtt accgtcaact
     3661 gcggcagtta cgccatcttg caataatagc agttcgtctc cttcactgag cagacgcagc
     3721 agcgcagcaa aatccgtcag ccagggtgaa cgatgtaacg tgtgcagcat aaacgcctca
     3781 aaacctcaaa ataacatcgt agttggcgag ttcgcggcgt aaggcatctg cttcgagcgg
     3841 cgtggcttcg acaacaaagg gtgtctgcgg atctaacccg cgttcgcgca gtgaagccgc
     3901 acaaacccag cactgttcaa tgtcgtacag acccaacaat ttaaaagtgg caatgtaatc
     3961 acgcgccagc actgcatcgg gcttttgtcc tgacagcagc tgaaaaacgc catcagcaat
     4021 aaagaagacg gccagatcgt cagttaatgc ggaagttgcc agtaaagcat ctaaaccttc
     4081 ccgaccagca gctgtaccat gaggtgcagt agaaaaaaca aacgcaattc gtttcatcag
     4141 aactgtacca ccctgtcaca ggtcagcgag gcttccgcca gcgcgccaag tccgcttaag
     4201 gtaaatcccg gctgaaggtt tgacgaagcc agccccagcc ttcctgcttc agtttcatcg
     4261 acgataccgc ggcgtaacgc tgccgctacg cagatattca gcgccacacc atgttgcgca
     4321 ttcaactgtt gccagccgcg cacaaggtca aattcgtcac ttgccggtga ggtcaattgg
     4381 ttagcgttat agacccctcc ccgatagaaa aagacgctgc ttaactcatg gccttctact
     4441 atcagcgcct gcgcaaactg aaaagcacta ctcgcctgtt gcgtaccgta tgctggcccg
     4501 gtcaccacga tggcaaaacg cattacttat cttgcccctg gaaatcaccg ctcttgaact
     4561 ggcggatgta gagatagaca gtgtgtttgg agatgttcag gcggtcagca acctggttga
     4621 tcgcatcttt aatatcgaag atccctttct cgtagagatt ctgcacgatc tgacgatttt
     4681 tggcgttatt agaaacattg cgatcggcat tcacttcttc gatggtgaac tccagcgttt
     4741 gggtaaccag atcttcaaca gaagaggcaa agttgacgct tgaaccgaca tccggggttt
     4801 ctggcggcac aaaagtgctc ataatctgcg agaagggaac atcaagattc atattgatgc
     4861 acagcagacc aattacacgc tgttcgcggt tacgaatcgc gatagtcagg gacttcatta
     4921 atacgccgct tttggcgcga gtaaagtagc atttagaaac gctgctatcc gctcccgtca
     4981 tatcgtgcag catacgtagc gccaggtcag taattggcga accaatcttc cggcctgtat
     5041 gttcaccgtt agcaatgcga atggctgaac attttagatc ctgcaaagag tgcaaaacga
     5101 tttcacagtg ggagccaata agcatcgcta acccgtccac caccgcttcg taggatttca
     5161 gaatatcaaa atcggtctgg tcgaaaggac gttgatccag taaatccaac tcactggttt
     5221 cgttggttaa aagcgacctg gacatgaaaa aaaacactcc ttttcaggag cctgtcgtta
     5281 acttttcagg gcaggctcat taatgatgcg ggtaactaaa ttaatacagc ggaggttccg
     5341 ctttccagca ctaattatat ccggcctgta ataaaaaaac cgccgcctgg tcaggcggcg
     5401 gttcttaatg cttatttttt agcagaatct gcggctttcg catcagcttc cggctttgca
     5461 tcagccttcg gtgctggttt cacatccagc agctctacgt caaacaccag ggtagaattc
     5521 ggtgggatcc ccggaacacc cgctttgccg taagccagtt ctggtggaat aaccagtttg
     5581 atcttaccgc ctttcttgat gttcttcaga ccttctgtcc aacccgggat aacaccgtcc
     5641 agacggaaag aaagcggttc accacgggtg taagagttgt cgaactcttt accgtcgatc
     5701 agcgtacctt tgtagttcac tacaacagta tcgctgtctt tcggtgcttc gcctttaccg
     5761 gcttctacta cctgataaac cagaccagtt gaagaggttt tcacaccttt ctctttggca
     5821 aatttctcgc ggtactcttt accttttgct tcgttatcag ccgcgtcttt ttccatcttc
     5881 gcctgagcag aagacttcac gcgagcttcg aatgcttgca gagtctgttc gatctcttgg
     5941 tcggagagtt tgctcttatc agcaaatgca tcctgaacac cagcgatcag ctgatcttta
     6001 tccagtttga tgcccagttt ttcttgttct ttaagagagt tttccatgta acgacccagc
     6061 gaagcaccca gtgcataagc tgatttctga tcgtcatttt tgaacgctgc tttgctgtca
     6121 gcagttgtag caggttttgc agcttcagca gcaaaagtga ttggtgcatg cagggcaacg
     6181 gccattgtgg tcgccagcag cgttacttta aacagtgatt tcatccatat ctccaggatc
     6241 ggggcatctc accccagggt taactattat cagaagggta ctataaagcg ttgtcgaaca
     6301 aatctacata cagacacgcc ctattatcat ctattttcag actctttttg tttaaattag
     6361 tttcgatgac cgcgaaatga gtgctgtctc gggcagcaaa gttaagtaga atccgcggca
     6421 accattcgac aaaagaggtg aatcatgcag gatttatcat tggaagcacg cctggcagag
     6481 ctggagagcc gactggcttt tcaggaaagc accattgaag aactgaacgt cacggtgacc
     6541 gctcatgaaa tggagatggc gaaactgcgc gatcatctgc gtctgctgac cgagaagtta
     6601 aaagccagcc agccgtcgaa catcgcgtcg caggctgaag aaacgccacc gccacattat
     6661 tgaggcgtaa aaaaagcggg gattccccgc ttttttgtca ccttttcggt attagtggca
     6721 accacaaccg ccgttgcctt taccgccaca gcagccttcg ccaccgtgtt catgaccgtg
     6781 atcgtggcca tgaccgccgc agcaaccgtc gtggtcgtga tcgtggtgat gatcgtgcgc
     6841 gccgtgaacg tgaccatgag ccagttcttc ttcggtcgct tcacgaatcg ccacaacctc
     6901 aacgttgaat ttcaggttct gaccggccag catgtggtta ccatcaacca ctacgtgatc
     6961 gtcttcaacc gcagtgattt caaccggtac cggcccctgg tcggtttcag ccaggaaacg
     7021 catacctacc tgcagttcat caacgcccat aaatacgtct ttaggaacac gttgcaccag
     7081 gttttcgtcg tactgaccgt aagcgtcgtt cgcgccaaca gcgacatcaa atttgtcgcc
     7141 aacttcatga ccttccagcg ccgtttccag gccagagatc agggaaccgt gaccatgcag
     7201 gtagtccagc ggcgcactca ccggagactc atcaaccaac acaccgtctt ctgtacgtac
     7261 ctgataggcc aggctgacca ccaggtcttt tgctactttc atgatatctc ctgagcatgg
     7321 gaagaatagt ggcgcagatt gtagcggaat tctgcagccg tgtactcact agcttaaaaa
     7381 aactcggcgc atatcgctag tccggatgaa aaatcccgat cacttgctca tctttgcgaa
     7441 cgtgatcgcg ggcttctttg tctgcttctc gcatctgatg tccgcactta acgcattcaa
     7501 caatatcaat attattttcg cgccacatcg ccattgaatc ctgtgcctga caggccgggc
     7561 attttgcgcc cgcaataaaa cgttttcgga ttgccatctt taccctctac tcaaattcat
     7621 cccagccgtc cagctggcgt cgttcttgtt gcatttcacg ctggaaaatc tcttccagtt
     7681 cgcgtcgggc ttccctggcg cgagaaattt gtacagtatc ggcatgcatt gggatgagct
     7741 ctcgcagcat ccgcatatcc aggcggcgaa aatgcagttg cgcccgctgc gcctgatgcg
     7801 gatgcatccc aagcgtgacc aaagtcttgc gccccagctc taacgcactg gagaatgttt
     7861 cacgggaaaa ctgcgtcacc cctgcctgta ataactcatg cgcttccaca cgtccgcgcg
     7921 ctcgcgcaag aatatgcaaa tgcggaaagt gctgctggca tatttccacc agcttcatgg
     7981 tgtcttccgg ctcgttacag gtaatgacga tagactcagc ggcctctgca cccgcagaac
     8041 gtaatagatc gacctgcgtg gcgtcgccgt aataaacttt gtagccatat ttacgcatca
     8101 ggttaacggc gcctgatatc ccgctccagc acggtaatgc gcattttatt tgccatcagc
     8161 aaacgaccaa tcacctgacc aaaacgcccg aagcccacga caatgacctg gggtttatca
     8221 tcgttgaccc acggtttttc gtcttcttct tccggtccgt taaactggcg ggataaccat
     8281 ttatccacca gcttcatcag caacggcgtg gtcatcatgg aaagcgtcac cgtcaccgtc
     8341 accagcaaca gcgccatctg gtcgccctgg aataaacgtt gtgaagaagc ggtagaaaag
     8401 aggacaaagg caaactcacc gccctgactc aacacgccag caaactgcat ccgctctgag
     8461 ctacgcacgc catacaatcg cgccagcaga tacagcacga gaattttcac cgccaccagc
     8521 acaaccacgc ttatcactac ccacaacaga tgggtataaa gcaccccgag gttgagcgac
     8581 atgccgacag agataaagaa caaaccgagc agcaagcctt tgaagggatc gatagccgtt
     8641 tccagttcat ggcgatattc actttccgcc agcagcacgc ccgcaataaa tgtaccgagc
     8701 gccatcgaca gccccagcgc atccataaac aatgcggaac ccaacaccag cagcagcgtc
     8761 gcggcggtga acacttcccg cacgccagaa gctgcaataa agcggaatac cggacgcagt
     8821 aaatagcgcc caccaatcag catgccgaca aacgccagca ccttcatgcc gatcttcatc
     8881 cagtcgaaat gttcgtctgc cgaccccgcc aacaacggca ctaacgccag tgctgggatc
     8941 actgccagat cctgaaacag cagaaccgaa aacccgagct ggccggattc gctgcgattc
     9001 atccctttct cacgcatcaa ttgcaacgcc attgcagttg aagacatcgc aaggccaatg
     9061 ccaccgacca ccgccgcctg ccaggcgaaa tccgtcagca tcaataatcc cgccagcaac
     9121 gccgcgctta acagcacctg tgccgcgcct acgccaaaaa tcgaacgccg cagttgccaa
     9181 agtttggagg gattcaactc aaggccgatg ataaacatca ggaataccac gccgagttcc
     9241 gaaaagtgga ggatctcatc gacgtcgcta ataaacccca gcccccacgg gccaattgca
     9301 atccctgcca gcaaatatcc caacacagcg ccaatcccca gccgcgatgc caacggcacc
     9361 gcagccaccg ccgcgaagag aaacagcact cctgcgagta aaaaatcgga accttccatc
     9421 agcggcctcc tggagacagc ggatttgcca gccagtcacc gtaggctctg gcgtggttcg
     9481 ccagctcctt tgcgctttgc cgtctcgccc agtaaataat gatgggactt aaccaatgca
     9541 tccggcacat gcccgccgcc agttcaaagg ggcgcagcac atcgctcatc gggtagcgat
     9601 tcagcgcgtc ataacggtaa gcactttccg gctcgccggt ggtaatcacg ttacgccagt
     9661 actttcccgc cagttggttt cctcccggcc cgctggcaaa accacgactt aatacccggt
     9721 ccagccactc tttcagtagc gccgggcagc tataggtata aagaggatgc tgaaagacaa
     9781 tcacctcgtg ctcgcgcagt aatgcctgct cacgggggat atcaataaaa aaatcgggat
     9841 agtgcgcgta aaggtcgtgc acggtaacat tgctgagctg cgtggccggt ttaagcagta
     9901 cccggtttgc caccgagtcc tgagattccg gatgggcata cagcagcaaa actttcgctg
     9961 gctgagacat catccccctc ccggtatggt ttttgtgtat agtcgctgtt ttgggctacc
    10021 attgcgcccg gtgcggcagc tcgcccatac attacattat cataatgata agttaacata
    10081 gtctgaacat acggcgcctt atgattgttt tctcctcgtt acaaattcgt cgcggcgtgc
    10141 gcgtcctgct ggataatgcc accgccacca tcaaccctgg gcagaaagtc ggcctggtgg
    10201 gtaaaaacgg ctgtggtaaa tctaccctgc tggcattgct gaaaaatgaa atcagcgccg
    10261 acggcggcag ctacaccttt ccgggaagct ggcaactggc gtgggtgaat caggaaacgc
    10321 cggcgttatc gcaagcggcg ctggaatatg tcattgacgg cgaccgtgaa tatcgtcaac
    10381 tggaagcgca gctgcacgac gccaacgaac gtaacgacgg gcacgccatt gcgaccattc
    10441 atggcaagct ggatgctatt gacgcatgga gtattcgctc ccgtgccgcc agcctgctgc
    10501 acggcctcgg tttcagcaat gaacaactgg agcgcccggt aagtgatttc tccggtggct
    10561 ggcgtatgcg tcttaacctt gcccaggcgc tgatttgccg ttcagacttg ctgctgctcg
    10621 acgaaccgac taaccacctc gatctcgatg ccgttatctg gctggaaaaa tggttgaaga
    10681 gctatcaagg cacgctgatc ctgatctctc acgaccgcga cttcctcgat ccgatcgttg
    10741 ataaaattat tcatatcgaa caacaaagca tgttcgagta caccggcaac tacagttcgt
    10801 ttgaagtaca gcgcgccacc cgtctggcgc aacaacaagc gatgtatgaa agccagcagg
    10861 aacgcgtggc acatctgcaa agttatatcg accgtttccg tgccaaagcc accaaagcga
    10921 agcaagccca gagccgcatt aagatgcttg agcgtatgga gctgattgcc cccgcgcacg
    10981 tcgacaaccc gttccgcttt agcttccgcg cgccggaaag cctgccaaat ccgttactga
    11041 agatggaaaa agtcagcgcg ggctatggcg atcgcattat tctcgactcg attaaactga
    11101 acctggtgcc cggctcgcgc attggtctgt taggccgcaa cggcgcgggt aaatcgacat
    11161 taatcaaact gttagccggt gaacttgcgc cagtcagcgg tgaaattggt ctggcgaaag
    11221 ggatcaagct cggctacttc gcccagcatc aacttgaata cctgcgcgcc gacgaatcac
    11281 ctattcaaca tctggcacgt ttagcgccgc aggagctgga acaaaaactg cgtgactacc
    11341 tcggcggctt tggtttccag ggcgataaag taaccgaaga aacgcgccgc ttctccggtg
    11401 gggaaaaagc ccgcctggtg ctggcattaa ttgtctggca gcgtccgaat ctgctgctgc
    11461 tcgacgaacc gactaaccac cttgacctcg acatgcgtca ggcactcacc gaagcattaa
    11521 tcgagtttga aggcgcgctg gttgtcgttt cgcacgaccg tcatttgctg cgttccacca
    11581 ctgacgatct ctacctggtt cacgatcgta aagtcgaacc gttcgacggc gatctggaag
    11641 attatcaaca gtggttgagc gacgtacaaa agcaggaaaa ccagaccgac gaagcgccaa
    11701 aagagaacgc gaacagcgcc caggcacgta aagatcagaa gcgtcgggaa gcggagctgc
    11761 gtgcgcaaac ccagccgctg cgtaaagaga ttgcccgtct ggaaaaagag atggagaagc
    11821 tgaacgcgca actggcgcag gcggaagaga aactcggcga cagcgaactg tatgaccaga
    11881 gccgtaaagc ggagttgacc gcctgcctgc aacagcaagc cagcgccaaa tccggcctgg
    11941 aagagtgcga aatggcgtgg ctggaagccc aggagcagct tgagcagatg ctgctggaag
    12001 gccaaagcaa ctgatggcgc agataacgac gaccgatgcc aatgaattca gcagcagtgc
    12061 tgaattcacc cctatgcgcg gctttagcaa ttgtcatcta caaactatgc tgccgcgttt
    12121 gtttcgtcgt caggtgaaat tcaccccgta ctggcagcgg ctggagttgc ccgacggcga
    12181 ttttgtcgat ctcgcgtgga gtgaagcccc tgcacaggct cggcataaac cgcgtttagt
    12241 gatatttcac gggctggaag gcagtctcaa tagcccttac gcccacggtc tggttgaggc
    12301 ggcgcaaaag cgcggctggc tgggcgtggt gatgcatttt cgcggatgca gcggtgaacc
    12361 aaaccgtatg caccgcattt accattcggg cgaaaccgaa gacgccagtt ggtttttacg
    12421 ctggctgcaa cgcgaatttg gtcatgcgcc aacggctgcc gtcggctatt cgctcggcgg
    12481 taatatgctg gcctgtttgc tggcaaagga aggcaatgat ctcccggttg atgcggcggt
    12541 gattgtctct gcgccgttta tgctggaagc ctgtagctat catatggaaa agggcttttc
    12601 ccgcgtttat cagcgttact tgctgaacct gttaaaagcc aatgccgcgc gcaagctggc
    12661 agcctacccc ggaacgctgc cgattaatct cgcgcagtta aaatcggtac gtcgcatccg
    12721 tgaatttgac gatctaatca ccgccagaat tcacggctac gccgacgcta tcgactatta
    12781 tcgtcagtgt agcgccatgc cgatgctgaa ccggatcgcc aaaccgacgc tgattattca
    12841 cgccaaagac gatccgttta tggatcatca ggtgatcccg aaaccggaaa gtctcccctc
    12901 gcaggtggag tatcaactga ctgaacatgg cggtcatgtt ggctttattg gcggtacatt
    12961 acttcatccg caaatgtggc tggagtcacg cattcctgac tggttaacaa cgtatctgga
    13021 ggcgaaatca tgttgattcc gtggcaagac ctctcccccg aaacgctgga aaatttaatt
    13081 gaaagctttg tgttacgtga aggcaccgat tatggtgaac atgagcgtac acttgaacag
    13141 aaagtcgccg acgtcaaacg ccagctacag tgcggagaag cggtgctggt atggtcggag
    13201 ctgcacgaaa cggtcaatat tatgccgcgc agtcagtttc gcgaataacc tgcaaccgtc
    13261 ggcggacgag ataataatga tagctaagtc atggagttac tatgtctgcc aaacatccgg
    13321 tcattgcggt aacaggatcc agcggcgcgg ggaccaccac caccagcctc gcgtttcgta
    13381 aaatattcgc gcagttaaat ctgcatgcag ctgaggtgga aggcgacagt tttcaccgtt
    13441 acacccgccc ggaaatggac atggcgatcc gcaaagcgcg cgacgccggg cggcatatca
    13501 gctacttcgg ccccgaagcg aacgacttcg gcctgctgga acaaaccttc attgaatacg
    13561 gtcagagcgg caaagggaaa tctcgcaaat atctgcatac ctacgacgaa gccgtaccgt
    13621 ggaatcaggt accgggaaca ttcaccccct ggcaaccttt accagaaccc actgatgtac
    13681 tgttttatga aggtttacac ggcggcgtag tcacgccaca gcataacgtt gcgcagcatg
    13741 tggacttact ggtcggcgta gtgcctatcg ttaaccttga gtggattcaa aaactgatcc
    13801 gcgacaccag cgagcgcggg cactcacgag aagcagtgat ggactcagta gtgcgttcaa
    13861 tggaagacta tatcaactac atcacaccgc agttttcccg cacccatctt aacttccagc
    13921 gcgttcccac cgtcgacact tcaaacccgt tcgcggcaaa aggtatcccg tcgctggatg
    13981 aaagctttgt ggtgatccat tttcgtaatc tggaagggat cgatttcccc tggctgctgg
    14041 cgatgttgca aggctcattc atttcccaca tcaatacgtt agtggtaccg ggcggcaaaa
    14101 tgggtctggc aatggaatta attatgctgc cgctggtgca acgattgatg gaaggaaaga
    14161 aaatcgagta actctgctat tacgccggat aaaatactat ccggcttcac aacgggatag
    14221 ttaaatcacg cggcaaccac ttcatacgag tgagtaatat tcaccgcttt ttccagcatc
    14281 aacgccactg aacaatattt ctcggcagag agatcaaccg cacgcgcaac cgctgcgtct
    14341 ttcaggtcgc gaccggtgac gataaaatgc agattaatgt gcgtaaacag gcgtggtgcc
    14401 tcttcgcggc gttcagaggt caattttact tcacaatcga ccacatcctg acgccctttt
    14461 tgcaggatcg aaaccacatc gatgg
//
LOCUS       DADKRT010000106        14341 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.107, whole genome shotgun sequence.
ACCESSION   DADKRT010000106 DADKRT010000000
VERSION     DADKRT010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.107"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..619)
                     /locus_tag="JQ356_002696"
     CDS             complement(<1..619)
                     /locus_tag="JQ356_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HAY4622737.1"
                     /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
                     MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS
                     DDKFETHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGET
                     CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSR"
     gene            complement(1007..1753)
                     /gene="cutC"
                     /locus_tag="JQ356_002697"
     CDS             complement(1007..1753)
                     /gene="cutC"
                     /locus_tag="JQ356_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HAY4622738.1"
                     /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
                     SVRQWVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD
                     MPRMEKIMAAAGPLAVTFHRAFDMCANPLNTLSNLAELGIARVLTSGQKSDALQGLSK
                     IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
                     DAHADEYSRYVVDGAAVAEMKGIIERHQAK"
     gene            complement(1767..2333)
                     /locus_tag="JQ356_002698"
     CDS             complement(1767..2333)
                     /locus_tag="JQ356_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707763.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY4622739.1"
                     /translation="MANWQSIDELQDIASDLPRFTHALDELSRRLGLDITPLTADHIS
                     LRCHQNVTAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG
                     EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEYERLPNP
                     TLAVTDGKTTIKFHPWSIEEIVASEQSA"
     gene            2549..4282
                     /gene="argS"
                     /locus_tag="JQ356_002699"
     CDS             2549..4282
                     /gene="argS"
                     /locus_tag="JQ356_002699"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HAY4622740.1"
                     /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
                     DRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
                     SGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            4459..4947
                     /locus_tag="JQ356_002700"
     CDS             4459..4947
                     /locus_tag="JQ356_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HAY4622741.1"
                     /translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDT
                     DINVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDIEQLNLLKKSQRAWL
                     DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLT
                     RG"
     gene            complement(5067..5459)
                     /locus_tag="JQ356_002701"
     CDS             complement(5067..5459)
                     /locus_tag="JQ356_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HAY4622742.1"
                     /translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS
                     TRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL
                     RFIWEVPGGGRLIPPLKVQRNEVIVNYR"
     gene            complement(5459..7537)
                     /gene="flhA"
                     /locus_tag="JQ356_002702"
     CDS             complement(5459..7537)
                     /gene="flhA"
                     /locus_tag="JQ356_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HAY4622743.1"
                     /translation="MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFIL
                     DLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHT
                     GAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGM
                     PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
                     NVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
                     VGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGCEQKA
                     PAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
                     KFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
                     GEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQE
                     AQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAP
                     IQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGL
                     ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH
                     IRMTATIGGK"
     gene            complement(7530..8633)
                     /gene="flhB"
                     /locus_tag="JQ356_002703"
                     /pseudo
     CDS             complement(7530..8633)
                     /gene="flhB"
                     /locus_tag="JQ356_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416394.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
     gene            complement(8716..9360)
                     /gene="cheZ"
                     /locus_tag="JQ356_002704"
     CDS             complement(8716..9360)
                     /gene="cheZ"
                     /locus_tag="JQ356_002704"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HAY4622744.1"
                     /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLYYVVQMTAQAAEWALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
                     DLAEARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF"
     gene            complement(9371..9760)
                     /gene="cheY"
                     /locus_tag="JQ356_002705"
     CDS             complement(9371..9760)
                     /gene="cheY"
                     /locus_tag="JQ356_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheY"
                     /protein_id="HAY4622745.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFDKLDM"
     gene            complement(9775..10713)
                     /locus_tag="JQ356_002706"
     CDS             complement(9775..10713)
                     /locus_tag="JQ356_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HAY4622746.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
                     RVLPGHAYIAPGDRHMELARSGANYQIKIHDGPVGMLAMRQAGAWTLAQNEASCVVFG
                     MPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI"
     gene            complement(10716..11528)
                     /gene="cheR"
                     /locus_tag="JQ356_002707"
     CDS             complement(10716..11528)
                     /gene="cheR"
                     /locus_tag="JQ356_002707"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005063150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HAY4622747.1"
                     /translation="MRLPGCSRYSFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRS
                     LGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYR
                     VWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNL
                     TPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMI
                     YFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD"
     gene            complement(11666..12232)
                     /gene="flhC"
                     /locus_tag="JQ356_002708"
     CDS             complement(11666..12232)
                     /gene="flhC"
                     /locus_tag="JQ356_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhC"
                     /protein_id="HAY4622748.1"
                     /translation="MSEKSIVQEARDIELITLGARLQMLESETQLSRGRLIKLYKELR
                     GSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQC
                     PQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPS
                     RAVKRRKLSQNPADIIPQLLDEQRVQAV"
     gene            complement(12235..12585)
                     /gene="flhD"
                     /locus_tag="JQ356_002709"
     CDS             complement(12235..12585)
                     /gene="flhD"
                     /locus_tag="JQ356_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhD"
                     /protein_id="HAY4622749.1"
                     /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAT
                     TLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVNDLQQIHTGIMLSTRLLN
                     DVNQPEEALRKKRA"
     gene            13363..13791
                     /gene="uspC"
                     /locus_tag="JQ356_002710"
     CDS             13363..13791
                     /gene="uspC"
                     /locus_tag="JQ356_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspC"
                     /protein_id="HAY4622750.1"
                     /translation="MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPE
                     MYNQLAAPMLEDLRSVMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHH
                     FDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD"
     gene            complement(13798..>14341)
                     /locus_tag="JQ356_002711"
     CDS             complement(13798..>14341)
                     /locus_tag="JQ356_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
                     /protein_id="HAY4622751.1"
                     /translation="QIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ
                     HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT
                     SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI
                     VPRSAESQQRDKVATFPKLA"
BASE COUNT         3688 a         3785 c         3345 g         3523 t
ORIGIN      
        1 tgcgagaagt tttgaaagga taaatatgtg cgccattagt cactgaagta gcggcctgac
       61 tttccagctc atgcgccgcg ttgtcatcca tttttatttc tggcggaaaa tgggcaatgc
      121 ctttatgaca atcgatacag gtttcgccgc ccttttgtgc tttgttatgc attttctgcg
      181 cagattcact ttgcgaggca atatccatgg catcaaaaga atggcaacta cggcacgttg
      241 cagagtcagt tgcttttaat tctttccata ctgtttcggc catttcctgg cgatgagttt
      301 cgaacttatc gtcactgtct attttgccgc taacaaattc atgataaata tctttagatg
      361 cttttaattt agcaaataaa taatccatcc ctgactttgg aatatggcaa tctgcacatt
      421 ccgcacgtat ccctttctgg ttcgaaaagt ggacagttcc ctgatattcc tcaaaaggtt
      481 tactcatcga gtggcaggaa aggcaaaatg ctgtatccga cgttttatgt aaggcttttt
      541 gcgccagcaa taacccgccg ccaccaacca caaccgctat cagcaaaaac aataacccaa
      601 tgcgtttttt ccctcgcata gattcctcta aataaattcc agaacaccga aatcattgga
      661 taattaaata cacaacgaat taaccgcttg cataactcgg cacaacactg cctgaaataa
      721 tcgataaaga atatgattta ttacaatgta atcattaatt gctaaggaat aaccctgttg
      781 ttatttagaa tatatatttg tcagttttag caatttaaac cccataatta atgtgaatat
      841 ataaaatatt tttagcacaa cgctatgttc actgtcaccc gctcaacaga tcacggttat
      901 cgtacgtttt ttatactgct cagggataaa aaaaggcccc tgtcgaaatt gcaggggcct
      961 ggtacgagca agcatcatat tgggcgacat gatgcaacgg taaaaatcat ttggcctgat
     1021 ggcgttcaat gattcctttc atttcagcaa ccgccgcccc gtctacgaca taacgcgaat
     1081 actcgtccgc gtgtgcatct gatgacatgg acaatccttg attacgataa cgcatcggtg
     1141 aagcttgcca cgctcccgcg gagctatgga cttccagcac tccggcatcg aggaagtggt
     1201 gcaggttttc tgcacggact cctgctccgg ccataatgat tggagcatca cgatgggcaa
     1261 taagttccat aatttttgat aaaccttgca gtgcatctga tttttgccct gatgtcagca
     1321 cccgggcgat gcccaattcc gcaagattac tgagtgtatt taaagggtta gcgcacatat
     1381 cgaaggcgcg atgaaaagtc actgccagcg gaccggcagc agccattatt ttttccattc
     1441 gtggcatatc gacattcccg tcaacatcga gcacgcccgt caccagtcca ggaaaaccta
     1501 attcgcggac tgtgcgcaca tcctcaagaa tggcggcaaa ctcaccgtcg ctgtagcaaa
     1561 aatcaccacc gcgtgggcgg ataatcggat gcacagggat cgtcacccac tggcgcacgg
     1621 atttcagtac acccaacgac ggcgttaagc ccccctcttt tggggctgcg cataattcaa
     1681 ctctgtctgc gccgttttgc tgcgccgtta gtgcacattc catgctgtaa cagcaaattt
     1741 ccagtaatgc catttttact ccttaattac gccgactgct cgctggcaac gatctcttca
     1801 atggaccacg gatgaaactt aatagttgtt ttgccatcag tgaccgccag cgtcggattc
     1861 ggtaatcgct catactcacc ttttggcgaa ctggttttca ctgagatccc cggtaggctg
     1921 agtccttcat cagaaagcaa tgccagcgca cgggcattca gcgtttctgg atcacccggc
     1981 agaacgattt caatatgttc ccaaccttcg tgtgggtaac gtttttcccc gggccacggt
     2041 agctccacaa tggaaaactg ccagtgcgca acctgtaccg gttcatgcaa tttaaacaga
     2101 caaatcggtc tgccattgat catattttct gacaaaagct cgccacactg ttcaaaaccg
     2161 cgacgccagc gctcagcggt gacgttttga tggcaacgca aagaaatgtg atcggcagtc
     2221 agcggagtga tatccaaccc cagacggcgg gagagttcat ctaatgcgtg ggtaaatcgc
     2281 ggtaaatccg atgcaatatc ctgcagctcg tcgatagatt gccagttcgc cataatcact
     2341 cttcgtcttt cagtaaaagc gttaatttac cctgttgccc tgcgccaacc aaccgctgat
     2401 ttcacgccgc ttctgatgca atagtgaaaa cggcaatacg ccacgcgcac gttgctgacg
     2461 aaaacagcca tttgcagtat actcccgccc taatttcttt aactggtgcg ggcaattttt
     2521 gctcgcttca tcaatgtaag gtattccggt gaatattcag gctcttctct cagaaaaagt
     2581 ccgtcaggcc atgattgcgg caggcgcgcc tgcggattgc gaaccgcagg ttcgtcagtc
     2641 agcaaaagtt cagttcggcg actatcaggc taacggcatg atggcagttg ctaaaaaact
     2701 gggtatggca ccgcgacaat tagcagagca ggtgctgact catctggatc ttaacggtat
     2761 cgccagcaaa gttgagatcg ccggtccagg ctttatcaac attttccttg atccggcatt
     2821 cctggctgaa catgttcagc aggcgctggc gtccgatcgt ctcggtgttt ctacgccaga
     2881 aaaacagacc attgtggttg actactctgc gccaaacgtg gcgaaagaga tgcatgtcgg
     2941 tcacctgcgc tctaccatta ttggtgacgc agcagtgcgt actctggagt tcctcggtca
     3001 caaagtgatt cgcgcaaacc acgtcggcga ctggggcact cagttcggta tgctgattgc
     3061 atggctggaa aagcagcagc aggaaaacgc cggtgaaatg gagctggctg accttgaagg
     3121 tttctaccgc gatgcgaaaa agcattacga cgaagatgaa gagtttgccg agcgtgcacg
     3181 taactacgtg gtaaaactgc aaagcggtga cgaatatttc cgcgagatgt ggcgcaaact
     3241 ggtcgacatc accatgacgc agaaccagat cacctacgat cgtctcaacg tgacgctgac
     3301 ccgtgatgac gtgatgggcg aaagcctcta caacccaatg ctgccaggaa ttgtggcgga
     3361 tctcaaagcc aaaggtctgg cagtagaaag cgaaggggcg accgtcgtat tccttgatga
     3421 gtttaaaaac aaggaaggcg aaccgatggg cgtgatcatt cagaagaaag atggcggcta
     3481 tctctacacc accactgata tcgcctgtgc gaaatatcgt tatgaaacac tgcatgccga
     3541 tcgcgtgctg tattacatcg actcccgtca gcatcaacac ctgatgcagg catgggcgat
     3601 cgtccgtaaa gcaggctatg taccggaatc cgtaccgctg gaacaccaca tgttcggcat
     3661 gatgctgggt aaagacggca aaccgttcaa aacccgcgcg ggtggtacag tgaaactggc
     3721 cgatctgctg gatgaagcct tggaacgtgc acgccgtctg gtggcagaaa agaacccgga
     3781 tatgccagct gacgagctgg aaaaactggc taacgcggtt ggtattggtg cggtgaaata
     3841 tgcggatctc tccaaaaacc gcaccacgga ctacatcttc gactgggaca acatgctggc
     3901 gtttgagggt aataccgcgc catacatgca gtatgcttac acgcgtgtat tgtccgtgtt
     3961 ccgtaaggca gaaattaacg aagagcaact ggctgcagct ccggtaatca tccgtgaaga
     4021 tcgtgaagcg caactggcag ctcgcctgct gcagtttgaa gaaaccctca ccgtggttgc
     4081 ccgtgaaggc acgccgcatg tgatgtgtgc ttacctgtac gatctggctg gtctgttctc
     4141 tggcttctac gagcactgcc cgatcctcag cgcagaaaac gaagaagtgc gtaacagccg
     4201 tctgaaactg gcacaactga cagcgaagac gctaaagctg ggtctggata cgctgggtat
     4261 tgagacagta gagcgtatgt aatcgatttt tcgtgagagt aaagcctgat cagggttacc
     4321 tgatcaggct tttttattgc catctaaatg tattctgaaa atggacatgc cattgttttc
     4381 tgactgttgg ataagaggcc agaagcgtaa tatccggccc cagggaaacg ataacggttg
     4441 aatttaagga ataccgcagt gtttaaattt cttgtattaa cattaggcat tatctcttgc
     4501 caggcttacg cagaagatac ggttatagta aacgaccatg acatttcagc catcaaagat
     4561 tgttggcaaa aaaattcaga tgatgatact gacattaacg tgatcaaatc atgcctgcga
     4621 caagaataca atctcgtcga tgcgcaatta aataaagcct atggtgaagc ttatcgttat
     4681 atagaacaag tgccacgcac aggtgtaaaa aaacctgata tcgaacaact taacttgctt
     4741 aaaaaatcac agcgagcctg gctggatttt agggacaaag aatgtgaatt aatcctttca
     4801 aatgaggacg ttcaggattt aagtgaccct tattctgaat cagaatggct ctcatgtatg
     4861 atcatacaga ccaatacgcg aactcgccag ttgcagctat accgtaactc tgaagatttt
     4921 tatccaagcc ctttgacaag aggataattc acatcttttt ggcatgtttt gttgcaagct
     4981 attcctgata aataattgca acaagacatc gagccttttt cactgagtta ttaaacatac
     5041 tcgcgagcgc gtaatttttt tgtccttcag cgataattca caatcacttc attacgttgt
     5101 acctttagcg gtggaattaa ccgcccaccg cctggcactt cccagataaa tcgcaacggt
     5161 tctgctgccg ctataccgga aaaggccacg gtggttccgc tctgcccctc taattcgaca
     5221 caacgagatt gcgaacacaa gcgaacccgc agtcctgaag gtgtcgggcc gataagctga
     5281 taacgccacg ctaccagcgt catcaatcct gaagcaggtt gtcgcgtaga aagaggcgca
     5341 gacgacatcg actcaccgcg atgatttagc gtaattccta cactacttgc ctgccacatc
     5401 ccctccccgg cggcttgcac cagcagcgga aacaataata ttgctaataa ggttctcatt
     5461 atttgccgcc aattgtcgcc gtcatgcgga tatgtcggtt atcagacagt tccagattcg
     5521 acaggaccac taactgcggc aagctgcggc gcaggaagcg agacaataat ggtcgcagcg
     5581 cgtggttcac caacaatact ggcggcgcac ccagcatctc ctgacgggat agcgcttcct
     5641 gagtttgcgc cagtaaacga tccgccagcc ctggctccag tcctcccccg ccctgcagcg
     5701 cctgtagtaa caaacgttcc agcggtgtat cgaggccaat aacatggact tcatctttgc
     5761 caggaaacca ctgctgggta atcgcccgtc ccaacgccac gcgcacgacg gcggttaatt
     5821 catgtggatc gctttggatg ggcgcatgtt ccgccagcgt ttcgagaatg gtgcgcatat
     5881 cgcgaatcgg tactttttca tcgaggagat tttgcagcac tttatgcagt gtggtgagcg
     5941 tgacgacgcc aggaacgaga tcttccgtca gctttggcat ctcctgggcg acgcgatcca
     6001 acagctgttg cgcctcctga cgaccaaaca gctctgcggc atgctggcta atgaggtggt
     6061 taagatgcgt tgctaccacc gtgctggcct caaccactgt gtacccctga atctgcgcct
     6121 gttcttttag cgcactttca atccagatag cattcaggcc aaatgccgga tcgacggtcg
     6181 cctcaccagg taacgtcccg gcagcggttc cagggttaat cgccaaccag cgccccggat
     6241 aagcatcacc actgccaatc tccacgcctt tcatcaaaat gcgatagcgg gcaggttgca
     6301 gatccatatt gtcgcgaatg tgcaccactg gcggcagaaa tcccatctcc tgggcaaatt
     6361 tcttgcggat actgcgtata cggcccaaca actcaccatc ctgctggaaa tcgaccatcg
     6421 ggatcagtcg ataacccact tccattccca gagaatcttc cagttgtaca tcgttccacg
     6481 tcgcttcgac aacggtatta ttctctgcca tttttaccgg tttgggttcg gcaggcgctt
     6541 tttgttcgca tccgcgtatc caccaggcca gccccagcaa tccggcagtg aacagcaaaa
     6601 ataccaggtt cggcattcca ggcaccaagc cgagtaaacc gagcacggcg gcgcttaaca
     6661 acataacgct tgggttactg aaaagctgat tcaccatctg ctcgccaaca tcctgatcgg
     6721 tgctgacacg cgtaacgatg acccccgcgg cggtagaaat caccagcgcc ggaatttgtg
     6781 ccaccagacc gtcgccaatg gtcaatagcg tataactttc cgccgcgtgt cccatgctca
     6841 tgccatgttg cagcacgccg accagcaacc cgccgacaac gttaatgacc atgatgagga
     6901 tcccggcgat ggcatcgccg cgaacaaact tacttgcccc gtccattgag ccgtaaaaat
     6961 cggcttcctg agtcacttcg gagcggcgtt ttttcgcctc atcttcacca atcaatccag
     7021 cgttaaggtc ggcgtcaatc gccatctgct tacccggcat accatcgaga acaaagcgcg
     7081 cacccacttc tgcgatacgc ccggcacctt tggtaatgac cataaagttg atgatcacga
     7141 gaatgacaaa caccacgata cctatagcga aattgccacc aacgaggaag tgaccgaacg
     7201 cttcgaccac cttccctgcc gccgccgcgc cggtatgccc ttccatcaaa atgatacggg
     7261 ttgaagccac gttaagtgcc agacgcaaca acgtagtaaa caacagaatg gtcggaaacg
     7321 cagcaaactc aagcgtgcgc tgggtaaaca tcgccaccag caacaccatg atcgacaagg
     7381 caatattgaa ggtaaacaac aggtcgagta tgaatgcggg cagtggcagc accatcatcg
     7441 acaagatcaa caggatcaaa atcggtccgg caaggatctg ccattgtgtc gatttcaggt
     7501 ttgcgggcag gcgcagcatc gcggccagat tactcatggg tcggtttctc gttaataaaa
     7561 tccagggctt ccggcaccgg aagatgagta ggttgtacag ggcgctgtcc accagccaga
     7621 cgccagcgtt tcagttgcca gatccaggcc agcacttccg ccaccgcggc gtacagttga
     7681 cccgggattt gttgaccaat ctccgcatgt cgatacagcg ctcgcgccag cggcggcgct
     7741 tcaagcgtcg ggacgttatt ttcagcgcca atttcacgaa tgcgcagcgc gaccagccct
     7801 gcacctttag cgaccacttt cggtgcgctc attttgtttt cgtcatactg caacgctacc
     7861 gaatagtggg tcgggttatt gacaatgaca tccgctttcg gcacatcggc catcatccga
     7921 cgccgtgcgg cagctcgctg catctgacgg atccgtcctt taacatgggg gtcgccttcg
     7981 ctttgtttga actcatcacg aatatcctgc cgcgacattc gcagcttttt caggtggctg
     8041 aagatttgga aaaagacgtc aaatcccacc attggaatga caccaagcac caccagcagt
     8101 gcgcatagcc ctaccaaatc catcgcatta cccatggcgg taatcggaga ctcggccagt
     8161 aagcgcatca tctgcggcca gtgatgccag agaaaaaacc ccgtcacgct gccaaccaag
     8221 atggttttca aaattgcttt aagcaactcc gcgccagtct gtgccgagaa catccgttta
     8281 atgcccggta gcgggttgag tttggaaaac ttcggctgca aggattttcc gctaaatacc
     8341 agccccccca gcatgaccgg agaaatgagc gctaccagca ccacgccgct aatcagcggt
     8401 agcagcgcca gcatggcttc tctgatcagc agaataatct gcccgaggat cagattcggg
     8461 tctttgataa tactgtgatc aaaatgcagc ccagcggaga gcatgcccga caatcgacgg
     8521 gccagcgaca caccgccgaa ccagataaca cacacgccca ccagcaaaat cagcagtgag
     8581 gtcagttcac gggaacgcgg gatttagggc ttttgctgcc acacatcaag catagtgtgc
     8641 gtttgtcgga tgcggcgtca tcgccttatc agaccgcctg atatgacgtg gtcacgccac
     8701 atcaggcaat acaaatcaaa atccaagact atccaacaaa tcgtccacct gatcctgact
     8761 ggctaccaca ccggctttgc tggtatcgac ctgaggtcca ttaagcaaac tctggttttc
     8821 acgttttgga cgcgactcct gttccgggat gttttccaac agcaccatca gcaactggcg
     8881 ttcgatctcc tgaatgacat ccatcatccg cttaataacc tgcccggtga gatcctgaaa
     8941 atcctgcgcc atcatgattt ccagcagttg cgcgttagta aagctggtat gcgcgggtac
     9001 atctgccaga aattgtcgtg tatctgttac cagttcacgg gcctcggcaa ggtcaatcgg
     9061 atcggcaaac cagtcatccc aacgttgggt taacgctttt gctgatttct ccatttgatc
     9121 ctgatgcggt tgtgacgcct caacactgtt cagcgcccac tccgcagcct gggcggtcat
     9181 ctgcacaaca tagtacaaac gatcgcgcgc atcggggatg gcttccgccg cttcggcaat
     9241 ggcctgatcc agccccagtt cccgcaaact gtcgcgcagc atacgcgtca ggctgccgat
     9301 gcgcgcaatg atatcgccag ctgaatgctc gtcagcaggt ttgattgatg gttgcatcat
     9361 agtcgcatcc tcacatgtcc agtttatcaa agattttgtt gagtttttcc tccagcgtcg
     9421 cggcggtaaa tggcttcacc acatagccac tggcccccgc ttgcgccgca gcaatgatgt
     9481 tctctttctt cgcttctgca gtcaccatta acactggcaa tgccgacatc gcgccatccg
     9541 cacgaattgt tttcagcaat tccaggccat ccatattggg catgttccag tcggagataa
     9601 caaatccata accgcctgcc tgcaacttat tgagagcgtc gacgccatct tccgcttcct
     9661 caacattatt gaatcccagc tctttcagca ggttacgcac tatgcgtcgc atggtggaaa
     9721 agtcatccac aaccaaaaat ttaagttctt tatccgccat ttcacactcc tgatttaaat
     9781 acgtatcgcc tgtccggcac taatttttgc caacatttgc tggcttacct ggctaagatc
     9841 gaccacttcg cagacaccac ccatattgat ggcctcgcgc ggcatgccga acaccacgca
     9901 acttgcttcg ttttgcgcaa gggtccatgc ccccgcctga cgcatcgcca acattcccac
     9961 cgggccgtcg tgaattttga tttgataatt tgcgccacta cgcgccagtt ccatatgccg
    10021 atcgcccggc gcaatatagg catgccccgg caagacacgt tctccgtctt cggcttcttt
    10081 aaccccgatc tggcaaagct tattaagtct gtcggcaaaa gagcgggtga aaccgggcgg
    10141 catatgttgg gtaattaaca atgccgggct ggaaagcggc aacggttgca gtacgtgacg
    10201 aattgcctca gttccacccg ttgaagcacc aatcgcaatc agtttttcag aactcaacaa
    10261 cggacccgcc ttcagcgttg tcggtgctga caatggctta tgtgctgcaa ggctcgcctt
    10321 tgctgccgta cgcacctttt cagcaatcat ttcgctatac gccagcattc cttcgcgaat
    10381 acccagttgc ggtttggtga caaaatctat tgcccccagc tccagcgcgc gcagcgtgac
    10441 ttctgatcct ttgccggtca aggaagaaac catcacaacg ggcattggac gcaaacgcat
    10501 taatttttcg aggaaatcca gtccgtccat ccgcggcatt tcaacatcca gcgtcagcac
    10561 atcgggattg aatttcttaa tcaagtcacg cgcgaccagc ggatcaggcg cggtcgccac
    10621 catttccatg tcgctatggc tgttgatgat ttctgtcatg atctggcgca tcagtgccga
    10681 atcatcgaca gataacaccc tgattttgct catcgttaat ccttacttag cgcatacacc
    10741 gtctgaccac gcagcgtgaa gcggcgctca aggtggctaa agttttcaga gtgacccgca
    10801 aacagcaatc cgtcgggttt aaggagcgga acaaagcggc gcaaaatctc ctgctgggta
    10861 ttttgatcga agtagatcat gacgttacga cagaagatcg catcaaacgg ccccggcacg
    10921 gtgtactgtt tcgccagtag attcagcggg gcaaaatcaa catagttcgc cagctcctga
    10981 cgcacgcgta ccagcccttc atgcggtccc gtccctcgca tgaaataccg ttgcagttgc
    11041 tgcggcgtca ggtttttcaa ctcttcatgg cgataaatac cgcttctggc tttttccagc
    11101 acttcggtgt cgatatcact ggcaaacact ttccagcgtc cgggcgcggt gcccaatgtg
    11161 tcagccagcg tcatcgcaat gctgtacggc tcttcgccgg ttgaagccgc cgcgctccat
    11221 acgcgatact cgccagaacg gcgacgtgcg tgatccgcga gcagagggaa atgatgtgcc
    11281 tcacggaaaa atgccgtcag attcgtggtc agcgaattga taaacgcctg ccactcaccg
    11341 ctgtgctgat tagattccag caagttcaga taatgaccga aatccgtcag tcccagcgaa
    11401 cgcaaacgac gaaccagtcg gttgtaaacc atgtcgcgtt tatgatcggc caggacgatc
    11461 ccggctcgtt gatagatcaa ttgacttatc cgccgaaaac tgtaccgaga acaaccaggt
    11521 aacctaataa gataagcacg acatcatcct tccactgttg accatgacag gatgttcagt
    11581 cgtcaggcgt taacgcgcga ttggggcaaa aaaaagcagc ggtacgtcgt taccgctgct
    11641 ggcatgttgc gccacaccgt atcagttaaa cagcctgtac tctctgttca tccagcagtt
    11701 gtgggataat atcggcagga ttctgggaaa gtttacgtct ttttactgcc cgggatggcg
    11761 gttgacataa gctgcaggca aagctgccaa caggctggtg agcgtgggta ataaaattgc
    11821 cgccgcagca gttgcagctg gaaagttgca gtaatccact ttcaacaaac cgcaccaatg
    11881 tccaggcacg ggttaatgcc agcagtggtc cttcttctgc ttgtgggcac tgttcaaggt
    11941 ataaacggta ggctttgatc accgcatcga cgccattaca caaacctgtt ttcagtaaaa
    12001 actgccatgc attacagaac atcgaagcat gaacgttttg ttcccaggtc ataaaccagt
    12061 cggttgagaa tggcagcatg cctttcggcg gtgggcttcc gcgcagttct ttataaagtt
    12121 ttatcaggcg tccgcgactt aactgtgttt cgctttccag catctgcaaa cgagcgccca
    12181 gggtgatcaa ttcaatatcc cgcgcttcct gaacaatgct tttttcactc atgatcaggc
    12241 ccttttcttg cgcagcgctt cttcaggctg attaacatca ttcagcaagc gtgttgagag
    12301 catgatgccg gtatgaattt gctggagatc gttaacgcgg gaatcttgcg tcaactgagt
    12361 aatcgtctgg tggctgtcaa aacggaagtg acaaaccagt tgattggttt ctgccagctt
    12421 aaccatttgc ggaagagtca gtgccgctaa cgttgtcgcc atttcttcat ttatgccgag
    12481 acgaaacata gcggacgctt tgtcctgaac aatcaaacgc tgtgcaagta gtaaatatga
    12541 caagttgatg tcataaatgt gtttcagcaa ctcggaggta tgcattattc ccacccagaa
    12601 taaccaactt tatttttatg cggtttcacc gcaccccgtg atgtcgccgg gaagccccgg
    12661 taaaaaataa ttagcattag aatagtgcga taagctgcaa taagcagaac cacctttttg
    12721 gtttaatatg tccttacaaa tagaaatggg tctttacact tatctaagat ttttcctaaa
    12781 tcgacgcaac tgtactcgtc actacacgca catacaacgg agggggctgc gattttcaat
    12841 aatgtgtgat gcagatcaca caaaacactc aattacttaa cataaatgta taagccatac
    12901 ttttgttttg ggtgtatttc aatctgttaa aaagtttttc gctacgctag caagcaaaaa
    12961 tgaaactgga ataatcgaaa tgggatgttg cgcacagtta aaataactca ccgtaaataa
    13021 tcatctgcta taaataatca ctttcatgca ataccagata agctattttt aaacagacac
    13081 ttaccgcaca acaaactaat taaatacaaa gaaaggcaac aatcaactta atgttaatga
    13141 aatgttttac atatattaac cacttgttta atgcggagaa tcagtacact attttcttat
    13201 aattacattt gaaattatat gatcaccggg agtgattgat taattgtctt tactaataat
    13261 cagactaata tttacctgtt tgaccgagtt gggattgcgt cgtttctcca ttaggagtaa
    13321 agctttaatg tcacctgaag ttcacagaat aaggaacagg ttatgagcta tagcaatatt
    13381 cttgtcgctg ttgcggttac accggaaagt cagcaactgc tggcaaaagc ggtatctatc
    13441 gccaggccag taaagggaca catcagttta attactctcg cttccgaccc ggaaatgtac
    13501 aatcaattag ccgcgccgat gcttgaagat ttacgcagcg tgatgcaaga agaaacgcaa
    13561 agctttcttg ataagttaat tcaggatgcg gggtatcccg ttgacaagac gtttattgcc
    13621 tacggtgagt taagcgaaca tattctggaa gtatgtcaca aacatcattt cgatttggtg
    13681 atttgcggta atcacaatca cagtttcttt tcgcgagcat cctgctcggc gaaaagagtg
    13741 attgcctcaa gtgaggtcga tgtgctgtta gttccactta cgggtgatta accgctccta
    13801 cgcaagcttt ggaaaggtag caactttatc gcgctgctgg ctttccgcgc ttcgcggaac
    13861 tatctgcttt aggtcgctaa tgaagcactc ctgccagtgg ttaatatcgt ttttcacgat
    13921 aacgtccagc atttctgcat gacgggaaat acgttccgcc agcgacatag tcaatgcacg
    13981 atccagcgca gctgcaactt cgtcacgatc gtaggggtta acaattaacg ccgacgttaa
    14041 ctcgtttgcc gctcccgcaa attgcgaaag aacaagaacg cccgggttgg ctgggtcctg
    14101 agcagcaaca tactcttttg ctaccaggtt catcccgtca cgcagtggcg tcactaagcc
    14161 cacgtcagag tagcggaata ttttcatcag taatttacgg tcaaaatgct gattcaaata
    14221 ataaagcggc gtccagccta attgcccgta tttaccatta attcgtccag cttcattttc
    14281 gagctgatga cgaatatcct gataggcttg cacatcacca cgcgacgttg gtgcaatctg
    14341 g
//
LOCUS       DADKRT010000107        14093 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.108, whole genome shotgun sequence.
ACCESSION   DADKRT010000107 DADKRT010000000
VERSION     DADKRT010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14093
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.108"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            376..1200
                     /gene="gadX"
                     /locus_tag="JQ356_002712"
     CDS             376..1200
                     /gene="gadX"
                     /locus_tag="JQ356_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadX"
                     /protein_id="HAY4622752.1"
                     /translation="MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV
                     DKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQ
                     NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT
                     LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY
                     HSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQGNFYGTDRSAEGIRL"
     gene            1568..2296
                     /gene="gadW"
                     /locus_tag="JQ356_002713"
     CDS             1568..2296
                     /gene="gadW"
                     /locus_tag="JQ356_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadW"
                     /protein_id="HAY4622753.1"
                     /translation="MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFC
                     SPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
                     VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
                     RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
                     INTFRQYYGVTPHQFAQHSLGTFS"
     gene            complement(2659..5772)
                     /locus_tag="JQ356_002714"
     CDS             complement(2659..5772)
                     /locus_tag="JQ356_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HAY4622754.1"
                     /translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
                     VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
                     AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
                     NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
                     LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
                     TVARYNGKPAAGIAIKLATGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
                     ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLS
                     AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
                     ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
                     QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
                     AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
                     LDNGNLGHEKLTQARNELLSLAGQSPDQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
                     LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
                     LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
                     WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
                     DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIGAIIEAARMRLRP
                     ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
                     FARFKKA"
     gene            complement(5797..6954)
                     /gene="mdtE"
                     /locus_tag="JQ356_002715"
     CDS             complement(5797..6954)
                     /gene="mdtE"
                     /locus_tag="JQ356_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtE"
                     /protein_id="HAY4622755.1"
                     /translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPG
                     SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
                     SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
                     EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
                     FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
                     PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
                     ASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
     gene            7014..7292
                     /locus_tag="JQ356_002716"
     CDS             7014..7292
                     /locus_tag="JQ356_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622756.1"
                     /translation="MRDLQTSGIVGLSASKVGYRHSDRHGEVNDKKNVAVLPTVPASI
                     RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
     gene            complement(7293..7820)
                     /gene="gadE"
                     /locus_tag="JQ356_002717"
     CDS             complement(7293..7820)
                     /gene="gadE"
                     /locus_tag="JQ356_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadE"
                     /protein_id="HAY4622757.1"
                     /translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
                     IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
                     YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITLTLNISQQTLKIQKFNIMYKLKL
                     RRMSDIVTLGITSYF"
     gene            complement(8619..9191)
                     /gene="hdeD"
                     /locus_tag="JQ356_002718"
     CDS             complement(8619..9191)
                     /gene="hdeD"
                     /locus_tag="JQ356_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-resistance protein HdeD"
                     /protein_id="HAY4622758.1"
                     /translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
                     SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
                     GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
                     VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
     gene            9446..9778
                     /gene="hdeA"
                     /locus_tag="JQ356_002719"
     CDS             9446..9778
                     /gene="hdeA"
                     /locus_tag="JQ356_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeA"
                     /protein_id="HAY4622759.1"
                     /translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
                     VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
                     WDKIKKDM"
     gene            9894..10220
                     /gene="hdeB"
                     /locus_tag="JQ356_002720"
     CDS             9894..10220
                     /gene="hdeB"
                     /locus_tag="JQ356_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HAY4622760.1"
                     /translation="MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFID
                     LNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQA
                     SNDLPN"
     gene            10284..10931
                     /locus_tag="JQ356_002721"
                     /pseudo
     CDS             10284..10931
                     /locus_tag="JQ356_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
     gene            complement(10973..11503)
                     /locus_tag="JQ356_002722"
     CDS             complement(10973..11503)
                     /locus_tag="JQ356_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY4622761.1"
                     /translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDGMLHQNAFVI
                     IDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
                     NGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKITLKTFYCHKHNIMMILNL
                     KRINELVRHQHIDYLV"
     gene            complement(11659..12225)
                     /gene="slp"
                     /locus_tag="JQ356_002723"
     CDS             complement(11659..12225)
                     /gene="slp"
                     /locus_tag="JQ356_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein Slp"
                     /protein_id="HAY4622762.1"
                     /translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
                     PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
                     DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
                     YGAFWPEPGWGAPYYTNAVSQVTPELVK"
     gene            complement(12903..13697)
                     /locus_tag="JQ356_002724"
     CDS             complement(12903..13697)
                     /locus_tag="JQ356_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000020601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622763.1"
                     /translation="MSIDFTPGIINTYHGNIYNCTTNTDNVKTPDTPKWPCDNWEEQQ
                     PINSTFSGEGYNPEQFDLAQQQLQQINACHTNTTYTNADYSKVVVQLVSLINNIETIS
                     STPLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSV
                     QTIFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNM
                     TGQNLSGFALTLSRFYFEDLLNINFTDANLGDTIFYIKNTLPPQII"
BASE COUNT         3910 a         2987 c         3125 g         4071 t
ORIGIN      
        1 acctgataac ataacgttgt aaaaaccgaa tgcccagcct ttaaaaaaac agctgggcat
       61 tcggttgctt attaatcgca ataatatatt ggctgtctat tcatcgtgtt gataagatat
      121 atgttatatg aatgtttatt aaatgtagcg attgccttta atgtcacgaa aagggattat
      181 ttgcttgcta ttaatttcac tgcgttctta aacgcgtttt tgtattataa atccagtcat
      241 cctgcccgta gaacatcaca cattatcatc ctgttctccc gcttcgttta aatttattta
      301 tcaatcaatt tgacttaaga gggcggcgtg ctacattaat taacagtaat atgtttatgt
      361 aatattaagt caactatgca atcattacat gggaattgtc taattgcgta cgcaagacat
      421 aaatatattc tcaccatggt taatggtgaa tatcgctatt ttaatggtgg tgacctggtt
      481 tttgcggatg caagccaaat tcgagtagat aagtgtgttg aaaattttgt attagtatca
      541 agggatacgc tttcattatt tctgccgatg ctcaaggagg aggcattaaa tcttcatgca
      601 cataaaaaaa tttcttcatt actcgttcat cactgtagca gagatattcc tgtttttcag
      661 gaagttgcgc aactatcgca gaataagaat cttcgctatg cagaaatgct acgtaaaaga
      721 gcattaatct ttgcgttgtt atctgttttt cttgaggatg agcactttat accgctgctt
      781 ttgaacgttt tgcaaccgaa catgcgaaca agagtttgta cggttatcaa taataatatc
      841 gcccatgagt ggacactagc ccgaatcgcc agcgagctgt tgatgagtcc aagcctgtta
      901 aagaaaaaat tgcgcgaaga agagacatca tattcacagt tgcttactga gtgtagaatg
      961 caacgtgctt tgcaacttat tgttatacat ggcttttcaa ttaagcgagt cgcagtgtcc
     1021 tgtggatatc acagcgtgtc gtatttcatt tacgtctttc gaaattatta tgggatgacg
     1081 cccacagagt atcaggagcg atcggcgcag ggattgccga accgtgactc ggcggcaagt
     1141 attgttgcgc aaggaaattt ttacggcact gaccgttctg cggaaggaat aagattatag
     1201 aattttactc agacataaaa aaaacctggc ataggggacc gggaagagga tagtctgccg
     1261 tctccagact aataaaccgc tataacactc cctgttggca cgggaaactt tgtgctctca
     1321 gtaagttaaa tataactttt actggaaata agatcagcca tttttttata aacataagct
     1381 atacgctgtg cgaaaatata ttcgtgctgc atttacttat tatcaattaa ctgttatgca
     1441 aaactacttt gtggataaat tttggtccta ccaaatctgg cagtttttgc gctaagaaac
     1501 agtctggcaa catttcatta gtatactgaa attgaaataa tcgcagtatg aaatataagg
     1561 gataatcatg actcatgtct gctcggtgat cctcattcgt cgttcattcg atatttatca
     1621 tgaacagcat aaaatatcgc tgcataacga gagtatcgtg ctgctggaga aaaatttggc
     1681 agacgatttt gcgttttgtt caccggatac gcgacgactg gatatcgatg agctgacagt
     1741 ttgccattac ttacaaaata ttcgtcagct accacgcaat ttagggttac atagcaaaga
     1801 ccgtctatta attaaccagt caccccccat gccgctggtg acggcgattt ttgatagctt
     1861 caatgaatcc ggggtaaatt caccgatact gagcaatatg ctctaccttt cctgtttatc
     1921 gatgttttct cataagaaag aactgatccc cttacttttc aatagcatca gcactgtttc
     1981 aggaaaagtt gaacgcctta ttagctttga tatcgccaaa cgttggtatc tgcgcgatat
     2041 cgcggaaaga atgtatacca gcgagagtct catcaaaaaa aagttgcagg atgaaaatac
     2101 ctgtttcagt aaaatattac tcgcttccag gatgtcgatg gccagacgat tactcgagtt
     2161 acgtcaaatt cctctgcata ctattgcaga aaaatgtggc tatagcagta cgtcgtactt
     2221 tataaacaca tttcgacaat attatggtgt aacgccacat cagtttgcgc aacattcgct
     2281 aggtaccttt tcctgacata ttttgcattt gaatattggt caggatctca cacctgcttc
     2341 atgtgaaact cttccctgat gatttctgcc gggctaccgg ctagttctct ttcgcagttt
     2401 gccaggcggt ataggtattt tcaggaggaa aagactcggc atgtttggga ttattaagct
     2461 gacaattcat acgattacgg gaatgtgggt cagtattgtg ctgttcaaat tgatgacgaa
     2521 tggctggagt ggtttctact ttcagtgctg tgtactaagc ctggtattcc tgacggttag
     2581 ctggttgttg agtggtgaat ggttagcagg aaagagtaag gctgaacctt cacgttcaac
     2641 cttactctca tttacacgtt acgctttttt aaagcgggca aagagatgtt ccactacaac
     2701 gaaaaagacc ggaacgaagt aaattgccag cactgttgcg gcaaacatcc cgcccatcac
     2761 gccggtacct accgcgtttt gcgcgccaga accggcacca tgactgataa ccagcggcag
     2821 cacgccgaga ataaaggcca gagaggtcat caggattggg cgtaaacgca tccgcgccgc
     2881 ttcgatgatt gcccctatcg gcgttttccc ttctttctgc atcatctcaa cggcaaattc
     2941 gacaatcagg atggcgttct tggcggaaag cccgatggtg gtcagcaaac caacctggaa
     3001 gtagacgtca ttacttaagc cgcgcagatc ggtggccagt aatgcgccaa cgacgcctaa
     3061 cggaacaacc aacatcaccg agaacggaat tgaccagctc tcatagagtg cggcgagggc
     3121 gaggaacacc acgaccagtg aaatggcata cagtgcagga gcctggtttg aggataacgc
     3181 ttcctgatac gacagtccgg tccatgagta gccgacgcct gccggaagtt tagcgaccag
     3241 gtctgccata aatttcatag cgtcaccggt acttttcccg gccgccgctt cacctaaaat
     3301 ctccattgac gggatgccgt tgtagcgttc caatcgcggt gaaccatagg tccattcggt
     3361 agacgagtag gcagaaagcg gtgccatcgt gccagaggcg ttgcgtacat accattggtt
     3421 gatgttatcc ggcaacatac ggaacggcgt gcctgcctgg acatacactt ttttcacccg
     3481 cccctggttg aggaagtcgt tcacgtagct gctgccgaag gcggtggaaa ttgtctggtt
     3541 gatatcagac agcgccacac ccattgcctc agctttcgcg gcgttgacgt tcactttgaa
     3601 catcggcgta tcttccaggc cgttcgggcg taccccggtg acctggtcag gcgattgccc
     3661 tgccagtgat aacagctcgt ttcgtgcctg ggttagtttt tcgtgcccca ggttaccgtt
     3721 gtccagcagt tccatatcaa aacctgacgc ggtacccagt tcagccaccg cgggtaagtt
     3781 gaacgggaag acgacggctt tattgatact gcttaacgca atcattgccc gctgaatgat
     3841 cgcggtaacc gagttttcct caccgacacg ttcagaccac ggcttgagac tgataaacgc
     3901 caggccgttg ttttgcccct ggccgctgaa gccaaagccg ccaacggtaa acaccgactg
     3961 aacattatct ttctcttttg taagataata atccgtcacc tgttgcagca ctttcgtggt
     4021 gttaaccatg gtggcaccgg aaggtaactg cgcggtggtc ataaataccc cctgatcctc
     4081 ttctggtaag aaagaggtcg gtgtacgcag gaacagcacc gccatcccgg cgcaaatcag
     4141 caggtagacc accatgtagc gaccggtaca acgcaacagc gagcgggtgc tatcggtata
     4201 gtgctgagtt gatttttcaa acagcgtgtt gaagcgtgcg aacagggcgt taggtttgtg
     4261 accgccttcc ggcgcggctt tcagaatggt ggcgcacagg gcaggggtca ggctcattgc
     4321 cacaaatact gaaagcagca tggaggagat cagcgtgatg gagaactggc ggtagatctc
     4381 cccggttgcg ccgctcataa aggccatcgg cataaacact gcggaaagaa caacagcaat
     4441 accgaccagc gcacgttgga tctgccccat cgatttatgc gtcgcttcct tcggtggtag
     4501 cttatcttcc gcaatgacac gctcgacgtt ctccaccacc acgatggcgt catccaccag
     4561 taaccctatc gccagcacca tcccgaacat agttaacgtg ttgatggtga aaccgaccgc
     4621 cgacaagatc gcaaacgtcc cgagaataac caccggtacg gcaatcgtcg ggatgattgt
     4681 ggcacggaaa ttctgcaaaa acagatacat gaccaggaag acgaggatga tagcctcaac
     4741 cagtgtttta aaaacttcct gaatagaaat ttcgataaac ggcgtggtgt cgtaaggata
     4801 aaccgtcttc agacttgcgg ggaaataggc tgataagcgg ttcagctcct ctttgactgc
     4861 ccgcgaggta tccagggcgt ttgctccggt agccagtttg atggcgatcc cggcagcagg
     4921 tttgccgtta tagcgcgcca cggtggaata atcttccgct ccaagttcga cgcgggcgac
     4981 atcacgcagc agcacttgcg aaccatcttg ctgaactttc aacaggattt tgccaaattc
     5041 ttccggcgtt tgcagacgcg tctgcacaat gatcgaggcg tttagttgct ggtctgccgc
     5101 ctgtggcatg ccacccagtt gaccaccgga aatctggttg ttttgcacct taatctggga
     5161 aataacatcg gaaggtacca gattgtattt attgagtttt tgcgggtcca gccagatacg
     5221 catggcgtac tcggaaccaa agagctgtac gctaccaacg cccgcggtac ggcttagcgg
     5281 gtctttgata ttagacgcta catagtccgc gatatcgtac tggttgaggc tgccgttatc
     5341 agaaataaac gccgctacca tcagaatatt actgctcgac ttatcaacgc taatcccctg
     5401 ctgctgcacc gcttcaggta atgaaggcat agcgagttgc agtttatttt gcacctgaac
     5461 ctgtgcgata tcaggagatg tcccagtctc gaaggtcaga gtgatagagg cattacccgc
     5521 cgcatcactg gttgaagaca tgtacatcag gccatcaagc ccattcatat tttgctcaat
     5581 cacctgagtg accgagtctt ctaccgtttg cgcatcggca cctggatagg tagcgctgac
     5641 ggtaatggtc ggtggcgcaa tctgcggata ctgcgcaacc ggtaagttca tgatcgccag
     5701 accacctgca agcatcataa taatggcaag tacccaggca aaaaccgggc gatcaataaa
     5761 atagttagcc atgaaagtcc ccttaagcct gcaacgttat tgtttcgatt cggtgctggc
     5821 gttttcctgg ctggaggaaa ttgctcgtgc tttgataccc ggacgaatgc gttgcaaacc
     5881 ggaaacgatc acccgatcgc cagcctgcaa gccagaggtg acaacccact ggtcgccgat
     5941 ggctttgctg gcttcaattt cgcgtagctg cacaacatcg tctttatcca gaatgagcgc
     6001 cgttgcttta ccctgggcgt tgtgggtgac gccttcctgc ggcaccagta atacattctg
     6061 gcggctacct tcatccacta atgccgtgac gtacatgcca ggcagcaagt caccatttgg
     6121 gttggggaaa atcgcccgta acgtcacgga gcccgtggtt tcatccaccg tcgggtcgga
     6181 gaatttcagt gtgccggtct ggctgtagcg tttaccattt tccagattga gctgtactgg
     6241 cgtactgccc tgaacctgtt tgatttgccc actggcgacc tcttctttca tgcgcaagaa
     6301 atcctgcacc gactgcgtga gatcgacata aatcgggtcc agacgttgta cggtaaccag
     6361 cgaatctgcc tgattagcgg taacgagtgc gccgacggtc accgacgatt tcccgctgac
     6421 gcccgtaatc ggcgaggtga cattcgcgta ttgcagattg atcgtcgcct gttcaacagc
     6481 cgctttggcg acggtgacat tggcttctgc ttcattcagc tgggtgcgcg cggtgtcgta
     6541 atcctgacgg ctaacgtagt tggtcttcag caacgatgcc tggcggttaa aggtgatgcg
     6601 ggcattgctg gcggtagaga gcgctttcgc cagcgagcct ttggcggagt ttagctcggc
     6661 ctgtaaaggt gcaggatcaa tctgatacag cgaatcgccc tggttcactt tatcgccttc
     6721 gataaagttg cgtttaatga taataccgcc cacctgggga cgtatctcgg caacttcata
     6781 aggaacggtt ctaccgggca attcgctcaa cacattgacc gaaccggggg agagtgtgac
     6841 gacaccgacc tcaggcgtca tggcggcggc gttttccgcc gatttgtcat cgcaggcggt
     6901 gagcatcgcg ccgcagaata acaacggtat taacagcttt cttcttctgt tcattttagt
     6961 ccctgaaaat tcttgagaaa taacggttct ttaaattgcg cgcgaggaga gatatgaggg
     7021 atttacagac cagcggcata gtggggttgt cagccagtaa ggtgggatac aggcacagtg
     7081 atcgacatgg tgaggtcaac gacaaaaaaa atgttgccgt tctgccaaca gttcctgcca
     7141 gcattcgggc aacgaagggt tctactggtg gatacacata ccaggggaat aaagtcgttt
     7201 tagcctctcc tttagtaatc accgggggta atgaaatcag catctgcatc cctcgtcatg
     7261 ccagccatca atttcagttg cttatgtcct gactaaaaat aagatgtgat acccagggtg
     7321 acgatgtcgc tcatacgtct tagtttcaac ttgtacataa tgttgaattt ctgaatcttt
     7381 aatgtttgtt gcgaaatatt gagcgtcaac gtgatattgc tttcattttt atttttcaga
     7441 atcagttgca taattttgaa ctgattatgt gaaaaacata attgtgaatt cttatggggc
     7501 aagtgtttac cataagtaat ctcaagaaga tttttgatac tttctttgcg gctaacaaaa
     7561 taaataggcg ctttagcttt tagtttactg atgtgataag gtgccaaaac aataattctc
     7621 tcggcatcta atttctccag aaatttaatc gcttcttcat caaggatatg attgtgatag
     7681 gtatcaatga taaccttgaa gggtttattg cctacttttt tgatctctga cagggaattg
     7741 atttttatca tttcgtgatt atctttcaac tgccaaaagc cctgtaaaag aaaagaatct
     7801 ttcgtcatga gaaaaatcat aacttgctcc ttagccgtta tcgtttcgaa catgtcatcc
     7861 ttttcattat ttacatcctt gtccgaatcg ttgttcaata tagtaaacgc ctataagaac
     7921 tttacccttc gtgaactaat acgtctatta acactaatca atacttcaga tttatccatc
     7981 acgcactcca tatattgatc ctaagtaaga ttcctggttg ttatcagctt gtaaatagta
     8041 aacaaaaagt taacgtttgc ggattactgc ccaagaataa gttatcaata accagtttgt
     8101 gatctctgaa gaatattact aaagttaaaa tgtaatccga tttaaatatc gagtctcctt
     8161 gtttcgactt aagctggcaa ttggattgcc agctttcttt taacgcattg aaattacctg
     8221 agtaaataac gcattcatgt cttcaggttt ttatatagcg tctggagaca cggatattta
     8281 tgcaatgtaa tcaacgccag ttgcaaaaaa atgaacccgg attacttatt taaccgccca
     8341 tagcatcaac gcttacggaa ctctttgttc actttcccac agcactttta aaacattaaa
     8401 cctgactacg gaaaatatca gccatgataa tgtttgaaat ggctaatttg ccatggagtg
     8461 aaaaaaatta gatgaaattc agtaggttga aataatcact agcaggtaat tatttcaatg
     8521 atagtgcgca attgatctac aacactgcgt agcggagaga gtattaatcg gatcatagtc
     8581 acatcaagtg actatgatcc gggtgacaac cggggtaatt attgctgctt aacgaacaaa
     8641 ctggcgaagc tgaacaggct ggcggcgcta aatatcagtt caattcccac cagtgtggaa
     8701 accagcgtta cagacaccat cggcgttgca ccaaggaata tccaggcaat gacgatatcc
     8761 agcacaccaa taacgagctg tagccagctg cctttcattg aacgctgacg ataccaactc
     8821 atcaggcgaa taacccctgc aacacagaac aaaccggcaa taaatgccgc aatggcaaaa
     8881 atgcccagct ccggtgcgcg gatgaagaaa tagccgatca ataaataggc gactgcgacg
     8941 aggaaaccgg ataataccgg ccagaaatta tgactgcggt tgctgaataa cccgacaata
     9001 agcgcaatac ccgagcagat taataatgca cccactactg tgcttaaaat atcgccagag
     9061 acgaacggga aactgataca cagcaacccg acgataaaca gcagcacggc aataaactgg
     9121 attgctctgc gatgtttttt aagcatctcc agatcaaact tcaaaattgt tgccttatct
     9181 atatataaca tagaaccacc ctataaaatt aagaagaaaa tcccctgcta tcaatctatg
     9241 ccaaaaacgc gtctaagaat gcagtcgatt taataaaaat ttcctaattg cagtatctga
     9301 tgcatctgta actcattgta ttgaaataaa aatatctgat tttgatattt tccatcaaca
     9361 tgacatatac agaaaaccag gttataacct cagtgtcgaa attgatttgt gacggctctt
     9421 tcactttata gttgaggata ttacgatgaa aaaagtatta ggcgttattc ttggtggtct
     9481 gcttcttctg ccagttgtga gcaatgcagc ggatgcgcaa aaagcagctg ataacaaaaa
     9541 accggtcaac tcctggacct gtgaagattt cctggctgtg gacgaatcct tccagccaac
     9601 tgcagttggt tttgctgaag cgctgaacaa caaagataaa ccagaagatg cggttttaga
     9661 tgttcagggt attgcaaccg taaccccagc tatcgttcag gcttgtactc aggataaaca
     9721 agccaacttt aaagataaag ttaaaggcga atgggacaaa attaagaaag atatgtaatt
     9781 ccgggaatgc gttacatcgt acttccttgc atattgaaca ggccggaata tcttctttaa
     9841 aagcagctat tcctcctgtt catatataat ctatatattg aatgggttac aaaatgaata
     9901 tttcatctct ccgtaaagcg tttattttta tgggcgctgt agcggctttg tcactggtga
     9961 acgcacaatc tgcgctggca gccaatgaat ccgctaaaga tatgacctgc caggaattta
    10021 ttgatctgaa tccaaaagca atgaccccgg ttgcatggtg gatgctgcat gaagaaacag
    10081 tatataaagg tggcgatacc gttactttaa atgaaaccga tctcactcaa attcctaaag
    10141 tgatcgaata ctgtaagaaa aacccgcaga aaaatttgta taccttcaaa aatcaagcat
    10201 ctaatgactt gccgaattaa tgaggtacaa gtaaaaagga gtagcaagtt gagccatctt
    10261 gctgctcctt tttgcatttt tatatgacag cagaatttat tatacgtctt atactcgcgg
    10321 caattgcctg tggcgctatt ggcatggaaa ggcaaatgtg aggcaaagga gcagggttac
    10381 gcacacatgt attaattggc atgggaagcg ccctgtttat gattgtttcg aaatatggtt
    10441 ttgctgacgt gctgtcttta gatcacgtcg gactcgaccc cagccgtatt gctgctcagg
    10501 tggtgacggg cgtcgggttt atcggtgcag gtaacattct cgttcgtaac caaaatattg
    10561 taggtttgac gacggcagcg gatatctgga tgaccgccgc tataggtatg gttattggca
    10621 gtggtatgta cgaattgggt atgtatggtt cagtgatgac cttgctggtg ctggaagtct
    10681 tccatcaatt aaccttccgc ctgatgaaca aaaattacca tttacagctg acattagtga
    10741 acggtaatac ggtatcaatg ctcgactggt ttaagcagca aaaaataaaa acggatttag
    10801 tttcgttgca ggaaaatgaa gatcatgaag tggtcgccat tgatatccag cttcatgcca
    10861 caacgtcgat agaagatctg ttgcgattat taaaaggtat ggcaggggtg aaaggcgttt
    10921 caattagcta atctgtgtgg cagcgtagtc agactcaccg taagcctgaa attcacacca
    10981 gataatcaat atgctgatgg cgtaccagct cattgatccg cttaagattg aggatcatca
    11041 tgatattgtg tttatggcag tagaacgttt ttagcgttat tttcagtttc tccagaatat
    11101 cctccgttgt catttgattc gcaatgcagc tcagaacctg atgttgcttg cgcgaaagtg
    11161 acacagccgc ttcaggcaca gagcagtaac tgccattgat gagtgcgaca aaatcgatga
    11221 tagtgatagt ccgcggaaca aaggtcaccg gcactttccc caggcagcgt ttaatattaa
    11281 agggggagaa aataatcaca tggacaggtt ttaatcgttc aatttgagtg agaaaattag
    11341 aatgaaatac attattcatt aatgtatcaa taatgacaaa ggcattctga tgcaacattc
    11401 cgtcgatctc ttcttcgttc tgtatatgaa cgacattacc tttgctcaaa atgtttttca
    11461 tcgcggtgaa gaacatcgta tccctggtaa ttataagaaa cataaccgac tcctggtgcg
    11521 gacattaatt ttataatcag tttgccaaag gtaattaaca ggacagggct tataataata
    11581 atagttagct tgctgtgtat taattttatg taatgcacga tgcagatgct gagaaagcat
    11641 ctgcatcttt cggtggtgtt atttgaccag ctcaggtgtt acctgactca ccgcattggt
    11701 gtagtaaggc gcaccccagc ccggttccgg ccagaatgca ccatagccgt aatcccatag
    11761 gttataggtg gtattaacca cttctctcaa atgccacacc tggatgccct gcatattcac
    11821 ttccaggaag ttatacggga ctttattgat aaagccaggt tgttcaccct gaatggtacc
    11881 gaggatggta acaaagtgat tacgatagtt cactgggtca aggaagccgc tttgtctggc
    11941 gagcagtcgg ccctgatagt tggcttcaat atcaggtttc gcatagctat ccaacggtaa
    12001 tacagcgatt tctaacaacg tatccgtttt gccattgata acgttgataa ccttcccacc
    12061 aaagcgcgct tgttgaccaa catataaccc cggctggtta tgaacagcaa caaaactttt
    12121 ttgaatatca ggttggttat tgcctttgat attttgcgga attgaactac atgcggcaag
    12181 caaaaatgaa aggctgagga tgagtgcacc ttttgtcatg ttcatgttac tatccttatc
    12241 aacaaatatt aaaaccataa tagatatttc tttatagttt tcatctgatt ctgaggcgat
    12301 atgcctgata gtaacgtaaa cctgtctgat gtttatatcc cttttgttta gttcaattcc
    12361 attgattttg gggcgtggca taagtatcca tcgccccata atataatcct ttgttttaaa
    12421 attacataaa atctattttt attcaataat tataaagtgc taataatcaa tattatggta
    12481 ttatattctg ataatgattt gataagcgaa ttcttttgcc agatggtatt tctatttcca
    12541 ccccataatt tatatctttt tcattaggaa gtggcctctt taaataaggc gtgtgtgaca
    12601 ttttttttgg gttaagcgtc tcgaattgaa atacttcgaa ctgatattca gacatttctg
    12661 cccatgtttg aattttattg tatcgagaga gtgtcgtaga ggctttaact tgcttataac
    12721 attgtttttg gaattcttgc tgatatttta atatgtcatt gtatgaaaga ttggttatcc
    12781 tggcctctaa aaatttaatt attgtcgaag caatttccgc ttttgctcgt aaaaagttgt
    12841 cattaatggt taataatgtt gaaaataaac cttcgatttg tttgtcaaga tattgtccat
    12901 ctttatataa tttggggggg tagggtgttc tttatgtaaa aaatagtgtc acctaaattt
    12961 gcgtcagtga aatttatatt aagtagatct tcgaaataaa accttgacaa ggttagagcg
    13021 aacccggaaa ggttctgtcc tgtcatattg aaatcaataa agttggttcc ggcaaagact
    13081 ttcatcctgt ttttattttc actgtgctca atatataact tcgtcatttt ttgatacagg
    13141 ctttgaatat cttttatatt agttggtaag tcagctcgtt gttcagcaat aaaattagta
    13201 tctgaaaata tggtttggac actgaatgtt atgggtattc cctcttctac gctaatttta
    13261 gttatgattg ccttgtcggg tttaggatta gcgacaacaa tgattcgaca ttcagcactt
    13321 ttgttttttt catatctaat gttattaatc tgattaagta ttgattgtgt ctgttgcgta
    13381 agtggtgtcg aacttatcgt ttcaatgtta ttaataagac ttacaagttg aaccacaact
    13441 tttgagtagt ctgcatttgt atatgtggtg ttcgtgtggc atgcattaat ttgttggagt
    13501 tgttgttgcg ctaaatcaaa ttgttcaggg ttgtatcctt ctccagagaa tgtggaatta
    13561 atgggttgtt gttcttccca attatcacaa ggccacttcg gtgtgtctgg cgttttaaca
    13621 ttatcggtat ttgttgtgca gttataaata ttgccgtgat atgtatttat tatacctggg
    13681 gtaaagtcaa ttgacataac attccttatt catcatctgt tttatgctaa ggtttttaaa
    13741 ttggataatt agaacaggaa tggattttct tctacacaca ataaatataa tgcgttatat
    13801 cttcctgata taattacctt taaattccct ttcatttcca cccggtaata tttgtgtata
    13861 aaaaaagcag tgatagtatc gtaaaggaaa acgttaacaa ctatcaaaaa gcgctcattt
    13921 taaaaagtta ttatgttctc cgatagtgtg tgaagtaata tttttgtgat gttttagatg
    13981 tgtaataatg aaccaggtta aagtgtattt aaaaatgtgt tgtattagcg actgaaatct
    14041 gccttttaaa aaggaggagg gtactgagac aaagagtcat tgcttctccg ata
//
LOCUS       DADKRT010000108        13720 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.109, whole genome shotgun sequence.
ACCESSION   DADKRT010000108 DADKRT010000000
VERSION     DADKRT010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13720
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.109"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(89..544)
                     /locus_tag="JQ356_002725"
     CDS             complement(89..544)
                     /locus_tag="JQ356_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY4622764.1"
                     /translation="MVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLGR
                     LINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIVCVIELDDPSHERADRIIR
                     DRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH"
     gene            complement(1356..2420)
                     /gene="phoH"
                     /locus_tag="JQ356_002726"
     CDS             complement(1356..2420)
                     /gene="phoH"
                     /locus_tag="JQ356_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HAY4622765.1"
                     /translation="MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDA
                     VNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKA
                     RREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARDSRDTSPILARNEAQLHYL
                     KAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGD
                     IAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDE
                     AQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVR
                     FGKEDCVRSALCQRTLHAYS"
     gene            complement(2766..4037)
                     /gene="efeB"
                     /locus_tag="JQ356_002727"
     CDS             complement(2766..4037)
                     /gene="efeB"
                     /locus_tag="JQ356_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HAY4622766.1"
                     /translation="MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGT
                     LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLT
                     QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
                     TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA
                     ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQ
                     FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLAN
                     PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE
                     EYVKPIGGGYFFSLPGVKDANDYLGSALLRV"
     gene            complement(4043..5170)
                     /locus_tag="JQ356_002728"
     CDS             complement(4043..5170)
                     /locus_tag="JQ356_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HAY4622767.1"
                     /translation="MTINFCRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM
                     TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT
                     CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA
                     IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR
                     LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI
                     SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY
                     RTKDGFETYDKLTDADRNALKGPITAQAEDLAQLRGVLGLD"
     gene            complement(5228..6056)
                     /locus_tag="JQ356_002729"
                     /pseudo
     CDS             complement(5228..6056)
                     /locus_tag="JQ356_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309290.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
     gene            complement(6725..8233)
                     /gene="putP"
                     /locus_tag="JQ356_002730"
     CDS             complement(6725..8233)
                     /gene="putP"
                     /locus_tag="JQ356_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HAY4622768.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAI
                     LAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN
                     PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWL
                     GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES"
     gene            complement(8392..8601)
                     /locus_tag="JQ356_002731"
     CDS             complement(8392..8601)
                     /locus_tag="JQ356_002731"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622769.1"
                     /translation="MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQ
                     LTFLKGATAKNVRECNLMKNSVAEH"
     gene            8656..12618
                     /gene="putA"
                     /locus_tag="JQ356_002732"
     CDS             8656..12618
                     /gene="putA"
                     /locus_tag="JQ356_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional regulator/proline
                     dehydrogenase/L-glutamate gamma-semialdehyde
                     dehydrogenase"
                     /protein_id="HAY4622770.1"
                     /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL
                     ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP
                     ETEAVSMLLEQARLPQPVAEQAHKLAYHLADKLRNQKNASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLRIPDKATRDALIRDKISNCNWQSHIGRSPSLFVNAATWGLLFTGK
                     LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLENLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTYETLLAYLVRRLLENGANTSF
                     VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL
                     ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPR
                     EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGS
                     TEVATLLQCNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
                     QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
                     QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELHKEVFGPVLHVVRYN
                     RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
                     GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNAL
                     REWAANRPELQALCTQYGELAQAGIQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL
                     TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS
                     DQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
                     "
     gene            complement(12658..13296)
                     /gene="rutR"
                     /locus_tag="JQ356_002733"
     CDS             complement(12658..13296)
                     /gene="rutR"
                     /locus_tag="JQ356_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HAY4622771.1"
                     /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI
                     AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ
                     HLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR"
     gene            13584..>13720
                     /locus_tag="JQ356_002734"
     CDS             13584..>13720
                     /locus_tag="JQ356_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HAY4622772.1"
                     /translation="MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDF
                     AL"
BASE COUNT         3403 a         3734 c         3379 g         3204 t
ORIGIN      
        1 tttaaagaag agctcgtacg aaggtacggg ctttttttcg tatattgcac acaccggggg
       61 gatgagaagc cccgaccggg atacttagtt aatgcaccgg ttcactcttt gtcgccgcga
      121 ctaatgggcg aattttgtca cgagtctccc agaccggagg aatttcctcc aatttagtga
      181 cagaagctcg tacaaaaggc acccgtgcaa gagtcataat tgtatccaac caacggtcac
      241 gaataatgcg atccgccctt tcatgactcg ggtcatccag ctcaataaca cagactattt
      301 tattgttctt ctttgaaacc agaacataat ccattgccat gccattataa attgcaaaga
      361 aacgctttct ttcttcttcg ctaaactcag gttgttctgg aaagttgatc aagcgcccca
      421 gagagacctg gcaatggata tgacaataat gtccaaacca tttttccaga ttatcgaaat
      481 acattttttc acaacgagtg attaaccact cttttctttc caataaaata ccttcggcaa
      541 ccattccctg aaataactca tctcgctctt gccaacgaga gtcacgatag gttttctgcg
      601 gtatatagct ccttgtcgac gccttagcgg caggggaagt tgcagatgaa gggacgggtt
      661 gcgatttagc gatgattacc gatgaggcaa cttttcggag tgtcaatttt ctggcaacag
      721 caaaaccggc gataaatgca attgtcaaac aagttacaaa agccataaag ctcataatta
      781 attttcacct atccatgttg attatatttc attaccaatg ttactcgctg cagcgtgtta
      841 catgccaaca atgcaacgat caatatatag ttagtatcat gttttgatta ttacaaccat
      901 ccctatttag ccattgcggc ttgccttcca caaaaaaata acaacacaca atattagcaa
      961 agaattaatt aagattaacc ttacatttat aatattatcc ctaaagaata aatcagagga
     1021 atatattcgg tgttaaacag tcagtcaaag tatagcccat tgttgattaa acctcataag
     1081 caaaattggc accagatctc ctgtacaggt tgaatggccg aaaaaagata ggcagatgct
     1141 catttttttg gcttctggaa gaaaaactct ccgcgctggc agtattacac tggtctgatg
     1201 ctatgacgaa aaatgcctgg taagagtatc taaaccagac tccagttcag cttatcaaca
     1261 cgctcaaagt cgcccccctg aacgctaacc tgaagtgaaa atctgttgaa ataaaacaaa
     1321 gcccggttcg cccgggctct gcaccgataa cacacttaac tgtatgcatg cagcgtacgt
     1381 tggcaaagtg ccgaacgtac gcaatcctct tttccgaacc ggacgatccc aaccatttca
     1441 tcttcttcga aacgttccag cgcgtcactt aatccggagc acacgccgcg aggcaaatcg
     1501 cattgcgtga tatcaccgtt gacgataacc gtcacgttct ccccgaggcg ggttaaaaac
     1561 attttcattt gcgcggcagt cacattctgc gcctcgtcaa gaatgacgac tgcattttca
     1621 aaggtacgtc cacgcatata ggcgaacggc gcgatttcca ccttccctat ttccggtcgc
     1681 aggcagtact gcataaagga agcccctaag cgccggacca gcacgtcgta gaccgggcga
     1741 aaatagggag caaacttttc tgcgatatca ccaggtaaga agccaagatc ttcatcggct
     1801 tgcagaactg gacgggtgac gataatcctg tcgacatcct tatgtatcag ggcctctgcc
     1861 gcttttgctg cgctgatcca ggtttttccg cacccggctt cgcccgtggc gaatatcagc
     1921 tgcttactct caatagcctt cagatagtgc aattgcgctt catttcgcgc gaggatgggc
     1981 gaggtatcgc gactgtcgcg ggccatacca atggcttcta cgccgctcat ctgcacaagc
     2041 gaggtgaccg attcttcttc acgctgctta tggctgcgcg aatcccgtct cagcacacgt
     2101 tttgcctcgc gacgagcttt gatcactgct ttttgtcttc ccatggagag caccttgagt
     2161 tgtttgtatt catcacacgc gccgttggca gcgcgattat gcgcacgaac atcagagggt
     2221 tggcttcctt gtaagccata gtttgctttt ggataaaatg ccgaaaaacg gctacgcgca
     2281 ccgtttacgg cgtcggtaac acatgaaaag aaaggatgag gttgaaaatg caaagtgacg
     2341 agatgactac cggaggagaa aactccgcga gtggtggcgc gttgattatc taaaacatgt
     2401 ccagtacagg acgttaccat ccgcgatctc catagtgact gactatcact gccgggaact
     2461 tccgctgcta cttaataagt acaacagatc tcgcatttta ttgcaacaat atatttactt
     2521 atatttaact ataaaacact atttcagtga cattagtttc tactggaaag atgacagagt
     2581 gatgacagtg atgaaaaaag ctgtgtgctt tcagcaggat ttgcatcagg catcagtgca
     2641 cgatcgccgg atgcggcgtg aacgccttat ccagcctacc aaacccgcac tgattgtagg
     2701 catgataaga cgcgcaagcg tcgcatcagg catctgcgca caaatgcctt atccgcctaa
     2761 aaacattaaa cccgcaataa cgcgcttccg agataatcgt tcgcgtcctt cactcccggc
     2821 agcgaaaaaa aataaccgcc gccgataggt ttaacgtatt cctccagcgc ttcgccattg
     2881 agcctttttt gtactgtcag gaagcctttt tccagatcgt gttggtagca gacaaacagc
     2941 aaccccatat ccagttgtcc ggagttggtg acccccaacg aataactgta gccgcgacgc
     3001 agcatcaggc tggactcact ctccgccgtg cggggattcg ccagccggat atggctgtcc
     3061 agcgcgatca ccttcccttc cgggtcgctg gcgtaatcag gcacatcatg ctcatgctgc
     3121 attcccagcg gcgcaccggt ttgcttatca cggccaaaaa tcgtctgctg ttctttcagc
     3181 ggcgttctgt cccaaaattc cactcgaaac tgaatcaagc gtactgcctg atagctgcca
     3241 ccgattgtcc acgcaggctc ctgctgatct gccgttaccc acaccacttt ttgcatcaac
     3301 ttatcattct ggctatcggg attggcagtg ccgtctttaa agcccagcaa attaatcggc
     3361 gtctctttgc ctttactacg cgctgcgtga tcggaaataa acccttcccg cttccagcgc
     3421 acgctgagca aatccggcgt gtgtttgatg atatcgcgca gcgcatggat caccgtgtcc
     3481 tgggtgttgg cgcaaatttg tagcaacaca tcaccatggc ataacgccgc atccagcgag
     3541 tcgttgggga aacgcgtcat cttctgcaac tttttcggca tctgtggcgc aaggccaaac
     3601 cgctcatcaa acaatgagtg acccaccgat aacgtgatgg tgagattatc gggcgcaatg
     3661 tagccgccaa gaatgccgga atcgagtggt ggcaggcgcg gatttggcgt ttctggtgcc
     3721 gctccgccct gagtcagaaa agcaaaacgc tgagtcaaca agcgaaacaa ccgttcaaga
     3781 tcggctttat cgctggcaag cacatcaaac gccaccagca tcattgcggc ctgttgtggc
     3841 gtcaggatcc ctgcctgatg ctcaccataa aacggctgtt tctcattgcg tgcatccggt
     3901 gaaagcgtac ccggcgcact ttgcgttttt tgtgcatgag cgaccggaca acttcccgcc
     3961 agcgccagcg cacctatcac tttcagtaaa cgtcggcgtg acggttcatt cacgccgttt
     4021 tcatctttat actgcataac gcttaatcca gtcccagcac accgcgaagt tgcgccagat
     4081 cttccgcctg cgcagtaatc ggtcctttca gtgcattccg gtcggcatcg gtcaatttgt
     4141 cgtaggtttc aaaaccgtct ttagtacggt atttcgccag aatggtatcg acctttttaa
     4201 agttggcatc gacttttgcc agcagttccg ggttggcttt ttgcagttgt ggacgcagca
     4261 aatcgacaat tttctgcgag ccttcaacgt tagcctggaa atcccacaga tcggtgtggc
     4321 tgtagcgatc ttcttcaccg ctaattttgc tggctgccac ttcctcaatc agtccggctg
     4381 cgccgccgac cacttttgaa ggtgggaaag ccagttcact gatgcgtttt tgcaaatcga
     4441 ccacatctgt ataaagctgc tcagcgtact gatccatccc tttggtggtg ttgtcgccaa
     4501 acaatgcttt ttccagacgg tggaaaccag tgaattttgg gtcggcggct ttttgctcgt
     4561 aatcatcttc acgggcgtca atgctgccat ccagatcgga gaacagttca gcaatcggtt
     4621 caatgcgctc atagtgctgg cgcgtcggcg catacagtgc tttcgctttt tcgatatcgc
     4681 cagctttaat cgcgtcggta aaggctttgg tgtcggtcac cagctgcgtg gtttccgcca
     4741 tgacatacgc tttatatgca gtaattgcac caccaagact taacagcgca tcactttgcg
     4801 ccgcatccgc cgttgcctca cctttgacga tcaacttccc tttcgggtta gtcagcagac
     4861 cgcaggtcat atcgtattcg ccaggctgta aattcgccgt cattttctgg ctaaaaccag
     4921 gggcgatatt ttcccgctct tccaccacca tcacgccttt gaggatctcc cactccagcg
     4981 ccttctggct atggttctga ataatgaact gtgttttccc ggcgttaacc gtaatggtca
     5041 tcggttcgca ctgcttatcc gtcacggtca ctttgacctg cggcacatca gcggcgttag
     5101 ccataaaagc agaagaaaac agcgcagcca cgctcaactg caatgcgtta cggcagaagt
     5161 taatggtcat gacgagacta tccctttaaa gtatgttgta actaagcaag agtttgcgtc
     5221 gtatttgtta cgcggagcga gacgctgtcg cccctgcgcg tggtggcaga gcaaatgcca
     5281 ccagcgccgg gatgagataa ataaaccaga cggcgacttc gctgacgctc ggcgcttcct
     5341 gatagccaaa aatcccttcc atcagcgtgc caaacagcga gtgagttgag agcaccgcac
     5401 tcatatcgaa ggcgatttcc tgaaagtggt tccacaatcc ggcttcatga aatgcgcgaa
     5461 tggcaccagc tgccagccct gcggcgacga agagaataaa caggctggtc catttaaaaa
     5521 atgcaccaag attgaggcga ataccgcccc agtagagcag aaagccgagc accacggctg
     5581 tagcaagacc gagcattgca cccagcggcg gccagatccc gacatcttgt tgaaatgccg
     5641 ccagcaggaa aaagaccgac tccagccctt cccttgcaac ggcaaaaaag accatcatca
     5701 ccagcgccca gccatgatga tttccacgct acaatgcgct atcgactgcc tgttccagtt
     5761 gcacttacgt tgcgcgacac tttgcgcatc cagaaaacca tccaggtaag gatcaccacg
     5821 gcgatcaccg ccacgatacc ttcaaacagt tcctgttctt tttgcggaaa ttcgccggtg
     5881 gtttcgttaa tgaagatccc caggcccagg cacaacgcag cggcaagcaa cacgccaatc
     5941 cacatcacac caatccatcg gcctcgctgg gtacgcttaa gatagctggc aatcaaactg
     6001 acaatcagcg cggcttcaag tccttcgcgc aacataatga gaaacggaac aaacatgcca
     6061 cccaccctta aacgtttttc tgagtcaatc tatgcaaaga aaagtaaatc gcagtgatag
     6121 cgattatcat tacggtaaag aaaaatacaa gcggaatgtt tataaaatga tgttggaatg
     6181 taaacaaaga gaggtaatgc caggggatat aaacgattat tccagggtag aaagatggga
     6241 ttgtttgcaa agaaccatgt gttcttgccg gatgccgcgt aaacgccata tccagccgac
     6301 aaaactgtcc agactcaatg catcagagct tccatgtaaa actgataagc gggtgtatca
     6361 agcaatttcg tccatccgcg attatcaaat ctaacttttt gcccggaaca taataacagc
     6421 tcgggtgttg gtggcgtcaa aatcgctgaa gcgttccccg aaggccggga cagcccacat
     6481 ggatgtgggc tgagggcgcg tcttacagga cgttacctcg cgcccgaccc ggtagccgaa
     6541 ggggataagc tgaaggtacc gcgcagcggc gattttgttc gccagagccc gggggtgcac
     6601 agggggcggc ggcgattggc cgccccctgc gcgctccctg caccattcaa tttatatggc
     6661 gaggcacatt aagggagcgc aacccgctgc tgaagccaaa caaaaccgcc gcaggctaag
     6721 tcccttagct ttcctgcaac cgtgacggcg gagccgaatg atagtgcgca tcggcctcgg
     6781 caaagcgttt ttgcatcgcc gctgacggcg ctttacccag caaactaaac actacaatcc
     6841 cgatactgcc gaagatgaag cccggaataa tttcgtacag tcccagccag ccgaactgct
     6901 tccagacgat aaccgtcagc gcaccgatga tcatccccgc cagtgcaccg ttacgcgtca
     6961 tgcgtgacca catcaccgag aacagcacca ccggaccaaa cgccgcgcca aagcctgccc
     7021 acgcgtagct cactaagccc agcacgcggt tttccgggtt tgccgccagc gcaatcgcca
     7081 ccagcgccac caccagcacc atcacacgcc ctacccacac cagctctttc tggctggcat
     7141 gtttacgcag aaacgctttg tataaatctt cggtaatcgc actggagcac accagcagtt
     7201 ggcaacttaa ggttgacatt accgccgcca gaattgccga cagcagaatc ccggcaatcc
     7261 acgggttaaa cagaatttgc gccagttcga taaacacgcg ctcggcgttc tggtttaccg
     7321 cgcctgctac cgccgggtgc tcattaaagt aagcaatccc aaagaagccg acagccaccg
     7381 cccctgccag gcagaggatc atccaggtca tactgatacg acgcgcatgg acaatgctgt
     7441 ggtgagaatc cgccgccata aaacgcgcca gaatgtgcgg ctgcccgaag taacccagcc
     7501 cccaacccat cagtgagata atggcaacaa agttcagacc tttgagcata tcaacgtttt
     7561 cgatgctctt ttgtttgatc acttccagcg agtcaccaaa gccaccgaca ctgataatga
     7621 cgataaccgg tgtcaggatc agggcaaaaa tcatcaggct ggcctgtaca gtgtcagtcc
     7681 agctcaccgc gaggaaaccg ccaataaagg tgtaaaggat cgtcgccgca gctcccgccc
     7741 acagagccgt ttcgtagctc atgccaaagg tactttcaaa cagacgcgcg cctgccacaa
     7801 tgcccgaagc gcaataaatg gtgaagaaca gcaaaataac cagcgcggag ataatgcgca
     7861 aaatgcggct tttatcttca aaacgcccgg tgaaataatc cggcaatgtt aaggcgttat
     7921 tattgtattc ggtatgcaca cgcaaccgcc cggccaccag cttccagttg atccacgcgc
     7981 ctaatgtcag gccaatggcg atccagcttt cggaaatccc ggaaagaaaa accgcgccag
     8041 gcaaccccat taacagccag ccgctcatat ccgacgcacc cgccgataat gccgtcacaa
     8101 atggcccaag actacgaccg cccagaatat agtcgtcaaa gtttttcgtt gatcgccagg
     8161 cgataaaccc aatcaatatc atgccaaaga tatagacaca aaatgtcacc aacatcggtg
     8221 tgctaatagc catctaaagt ctccaaaaaa ttattatcgg caatgtcgaa acttgccgtt
     8281 atatctgcaa ccggaacggg gtaacagagt ttatttttta ccagggcgac cgtatcctgc
     8341 cggaagcgct ggttattcac aatcgattta acacaccatt tacattaaat tttagtgctc
     8401 agcgacacta tttttcatca ggttgcactc tctcacattt tttgcggttg cacctttcaa
     8461 aaatgttaac tgccgcagag aaaaagtctg agttattttt ttaatccctg tcatatcaat
     8521 ttcttttatt aacatttcat tcatttttaa gcttgctacg caggtcacat ttaacatggt
     8581 tgcacaaagt tgcaacatca tggatatttc acgataacgt taagttgcac ctttcagaac
     8641 aacaggagta atggcatggg aaccaccacc atgggggtta agctggacga cgcgacgcgt
     8701 gagcgtatta agtctgccgc gacacgtatc gatcgcacgc cacactggtt aattaagcag
     8761 gcgatttttt cttatctcga acaactggaa aacagcgata ctctgccaga gctacctgcg
     8821 ctgctttctg gtgctgccaa tgagagcgat gaagcaccga ctccggcaga ggaaccacac
     8881 cagccattcc tcgactttgc cgagcaaatt ttgccccagt cggtttcccg cgccgcgatc
     8941 accgcggcct atcgtcgccc ggaaaccgaa gcggtttcta tgctgctgga acaagcccgc
     9001 ctgccgcagc cagttgctga acaggcgcat aaactggcat atcacctggc cgataaactg
     9061 cgtaatcaaa aaaatgccag tggtcgcgca ggtatggtcc aagggttatt gcaggagttt
     9121 tcgctgtcat cgcaggaagg cgtggcgctg atgtgtctgg cggaagcgtt gttgcgtatt
     9181 cccgacaaag ccacccgcga cgcgttaatt cgcgacaaaa tcagcaactg taactggcag
     9241 tcacacattg gtcgtagccc gtcactgttt gttaatgccg ctacctgggg gctgttgttt
     9301 actggcaaac tggtttccac ccataacgaa gccagcctct cccgctcgct gaaccgcatt
     9361 atcggtaaaa gcggtgaacc gctgatccgc aaaggtgtgg atatggcgat gcgcctgatg
     9421 ggcgagcagt tcgtcacggg tgaaaccatc gcggaagcgt tagccaatgc ccgcaagctg
     9481 gaagagaaag gtttccgtta ctcttacgat atgctgggcg aagctgcact gactgccgca
     9541 gacgcacagg cgtatatggt ttcctatcag caggcgattc acgccattgg taaagcgtct
     9601 aacggtcgtg gcatctatga aggtccgggc atttcaatca agctgtcggc gctgcatccg
     9661 cgctacagcc gcgcccagta tgaccgggta atggaagagc tttacccgcg tctgaaatca
     9721 ctcaccctgc tggcgcgtca gtatgatatt ggtattaaca tcgatgccga agaggccgat
     9781 cgtctggaga tctccctcga tctgctggaa aatctctgtt tcgagccgga actggcaggc
     9841 tggaacggca tcggttttgt tattcaggct tatcaaaaac gctgcccgtt ggtgatcgat
     9901 tacctggttg atctcgccac ccgcagccgt cgccgtctga tgattcgcct ggtgaaaggc
     9961 gcgtactggg atagtgaaat caagcgtgcg cagatggacg gccttgaagg ctatccggtt
    10021 tatacccgca aggtgtatac cgacgtttct tatctcgcct gtgcgaaaaa gctgctggcg
    10081 gtgccgaatc taatctaccc gcagttcgcg acgcacaacg cccatacgct ggcagcgatt
    10141 tatcaactgg caggtcagaa ctactatccg ggtcagtacg agttccagtg cctgcatggt
    10201 atgggcgagc cactgtacga gcaggtcaca gggaaagttg ccgacggtaa acttaaccga
    10261 ccgtgtcgta tttatgcccc ggttggcaca tatgaaacgc tgctggcgta tctggtgcgt
    10321 cgcctgctgg aaaacggtgc taacacctcg tttgttaacc gtattgccga cacctctttg
    10381 ccactggatg aactggtcgc cgatccggtc actgctgtag aaaaactggc gcaacaggaa
    10441 gggcaaactg gattaccgca tccgaaaatt cccctgccgc gcgatcttta cggtcacggg
    10501 cgcgacaact cggcagggct ggatctcgct aacgaacacc gtctggcctc gctctcctct
    10561 gccctgctca atagtgcact gcaaaaatgg caggccttgc caatgctgga acaaccggta
    10621 gcggcaggtg agatgtcgcc cgttattaac cctgcggaac cgaaagatat tgtgggcttt
    10681 gtgcgtgaag ccacgccgcg tgaagtagaa caggcgctgg aaagtgcggt taataacgcg
    10741 ccaatctggt ttgccacgcc tccggctgaa cgcgcggcga ttttgcatcg cgctgccgtg
    10801 ctaatggaaa gccagatgca gcaactgatt ggtattctgg tgcgtgaagc cggaaaaacc
    10861 ttcagtaacg ctattgccga agtgcgcgaa gcggtcgatt ttctccacta ctacgccgga
    10921 caggtgcggg atgatttcgc taacgaaacc caccgtccat tagggcctgt ggtgtgtatc
    10981 agtccgtgga acttcccgct ggctattttc accgggcaga tcgctgccgc actggcggca
    11041 ggtaacagcg tgctggcaaa accggcagaa caaacgccgc tgattgccgc gcaagggatc
    11101 gccattttgc tggaagcggg tgtaccccct ggcgtggtgc aattgctgcc aggtcagggg
    11161 gaaaccgtgg gcgcgcaact gacgggtgat gatcgcgtgc gcggggtgat gtttaccggt
    11221 tcaaccgaag tcgctacgtt actgcagtgc aatatcgcca gccgcctgga cgctcagggt
    11281 cgccctattc cgctcatcgc tgaaaccggc ggcatgaacg cgatgattgt cgattcttca
    11341 gcactgaccg aacaagtcgt cgtggatgtg ctggcctcgg cgttcgacag tgcgggtcag
    11401 cgttgttcgg cactgcgcgt gctgtgcctg caagatgaga ttgccgacca cacgttgaaa
    11461 atgctgcgcg gtgcaatggc cgaatgccgg atgggtaatc cgggtcgcct gaccaccgat
    11521 atcggtccgg tgattgatag cgaagcgaaa gccaatattg agcgccatat tcagaccatg
    11581 cgtagcaaag gccgtccggt gttccaggcg gtgcgggaaa acagcgaaga tgcccgtgaa
    11641 tggcaaagcg gcacctttgt cgccccgacg ctgatcgaac tggatgactt tgccgaattg
    11701 cacaaagagg tctttggtcc ggtgctgcat gtggtgcgtt acaaccgtaa ccagctacca
    11761 gagctgatcg agcagattaa cgcttccggc tatggtctga cgcttggtgt ccatacgcgt
    11821 attgatgaaa ccatcgccca ggtcactggc tcggcccatg ttggtaacct gtatgttaac
    11881 cgtaatatgg tgggcgcagt ggttggtgtg cagccgttcg gcggcgaagg gttgtccggt
    11941 accgggccga aagcaggcgg tccgctctat ctctaccgtc tgctggcgaa tcgcccggaa
    12001 agtgcgctgg cagtgacgct cgcgcgtcag gatgcagagt atccggtcga tgcacagttg
    12061 aaagccgcat tgactcagcc gctaaatgca ctgcgggaat gggcagcaaa tcgtccagaa
    12121 ttgcaggcgt tatgtacgca atatggcgag ctggcgcagg caggaataca acgattgctg
    12181 ccggggccga cgggtgaacg caacacctgg acgctgctgc cgcgtgagcg cgtgttgtgt
    12241 attgccgatg atgagcagga tgcgctgact cagctcgccg ccgtgctggc ggtgggcagc
    12301 caggtactgt ggccggatga cgcgctgcat cgtcagctag taaaggcatt gccatcggca
    12361 gtcagcgaac gtattcaact ggcgaaagcg gaaaatataa ccgctcaacc ctttgatgcg
    12421 gtgatcttcc acggtgattc ggatcagctt cgcgcattgt gtgaagccgt tgctgcgcgg
    12481 gatggagcaa ttgtttcggt gcagggtttt gcccgtggcg aaagcaatat ccttctggaa
    12541 cggctgtata tcgaacgttc gctgagtgtg aataccgctg ccgctggcgg taacgccagt
    12601 ttaatgacga tcggttaaac aggtagccgg aggatgttac accctcctcc ggcatcttta
    12661 acgtggtcga atcccctcaa taataatccg ctgcacgttt tcaaccgttt gattgaaaaa
    12721 tacctcatcg cgcaacgttg cgcctgtcac cgcctccacc tgaggggcga aatcggcgta
    12781 atgttgagtg gaagcccaaa tcataaaaat caaatgctgc ggatcaatcg gcgcgagttt
    12841 gccgcttttg acccaaccgg caatcagcgc cgatttctca tcaattaatg ccttcaaatc
    12901 gcccgtcagt tcatccatta acagcggcgc gcctgccagc atctccatac agaacaggcg
    12961 cgaagcctgc ggataatcgc gtgagacttc cagcttcaga cggatgtact ctttgatcgc
    13021 cgccagcggg gcgaaatctt cacgaaacgc ttttaacggt gccagccaga tatcgagaat
    13081 ctgccgcagc acggcaatat acagcgcctc ttttgacgga aagtaataca gcagattggt
    13141 ttttgaaaca cccgccaact ctgcgatctg ctccagcctt gtgccgtgaa aaccgaattg
    13201 tgaaaaagtg tccagtgctg cgctaagaat cgcttttttc ttcgcgctta ctgcgcgcga
    13261 acgtttaccc gttgttttca ctgcgccttg cgtcatgcgc tctcccctct tgtagattgg
    13321 caacaggata gcaaaacccc cgcccggcct cgaccttctg cactctcatc gcgcacggat
    13381 gcatgtttta tgtgcaactg ttttgaccgt ttagtccact ttttaccaga tattttagat
    13441 aacacaatgc taacacatta ataacattca ctttttaaaa actggcatcc gctttgcaaa
    13501 caagccaata cgcggctgaa aaggatatgc aggatgcagc gccccgtctg actttcactt
    13561 tacgagacga agagaggttg atgatgaaaa ttggcgtatt cgtacctatt ggcaacaacg
    13621 gctggctcat ttcgacccac gcgccgcagt acatgccgac ctttgaactg aataaagcca
    13681 ttgtgcaaaa agcggagcat taccatttcg atttcgccct
//
LOCUS       DADKRT010000109        13665 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.110, whole genome shotgun sequence.
ACCESSION   DADKRT010000109 DADKRT010000000
VERSION     DADKRT010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13665
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.110"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..1867)
                     /locus_tag="JQ356_002735"
                     /pseudo
     CDS             complement(1..1867)
                     /locus_tag="JQ356_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            2265..2963
                     /locus_tag="JQ356_002736"
     CDS             2265..2963
                     /locus_tag="JQ356_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HAY4622773.1"
                     /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRISMTSIFGLASLG
                     IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPTHESF
                     IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
                     SIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
                     ALLLAMPLSAAWFA"
     gene            3069..3144
                     /locus_tag="JQ356_002737"
     tRNA            3069..3144
                     /locus_tag="JQ356_002737"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3102..3104,aa:Phe,seq:gaa)
     gene            complement(3293..3829)
                     /locus_tag="JQ356_002738"
     CDS             complement(3293..3829)
                     /locus_tag="JQ356_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HAY4622774.1"
                     /translation="MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAV
                     VFLFSVGYYVLIWQPLSERIVQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPAQV
                     SRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
                     AAEKTGMVNVQRLEFGRG"
     gene            complement(3831..5009)
                     /gene="gspL"
                     /locus_tag="JQ356_002739"
     CDS             complement(3831..5009)
                     /gene="gspL"
                     /locus_tag="JQ356_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000097227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HAY4622775.1"
                     /translation="MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQ
                     TDAIRLYIPGEWISVWQVELPDVARKQIPTILPALLEEELNQDIDELHFAPLNIDQQL
                     ATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGVMAGDAQRVICRIDECRGWS
                     AGRALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGEP
                     EGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQA
                     EEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEM
                     RGFTFDQKRQILHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK
                     "
     gene            complement(5006..5983)
                     /gene="gspK"
                     /locus_tag="JQ356_002740"
     CDS             complement(5006..5983)
                     /gene="gspK"
                     /locus_tag="JQ356_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspK"
                     /protein_id="HAY4622776.1"
                     /translation="MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQ
                     EYQQALWYSASAESLALSALSLSLKNEKRVHLAQPWASGPRFFPLPQGQIAVTLRDAQ
                     ACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL
                     GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMIRQQININ
                     TLDVTQSVILEALFDPWLSPVQARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQL
                     KTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGESE"
     gene            complement(5986..6585)
                     /gene="gspJ"
                     /locus_tag="JQ356_002741"
     CDS             complement(5986..6585)
                     /gene="gspJ"
                     /locus_tag="JQ356_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspJ"
                     /protein_id="HAY4622777.1"
                     /translation="MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVADH
                     DQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGV
                     VNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG
                     TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ"
     gene            complement(6582..6953)
                     /gene="gspI"
                     /locus_tag="JQ356_002742"
     CDS             complement(6582..6953)
                     /gene="gspI"
                     /locus_tag="JQ356_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspI"
                     /protein_id="HAY4622778.1"
                     /translation="MKRGFTLLEVMLVLAIFALAATAVLQIASGALSNQHVLEEKTVA
                     GWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYWRTIPLNTGNALLQAVDIEVSRH
                     EDFSSVIQSRRAWFSAVGGQQ"
     gene            complement(7013..7513)
                     /gene="gspH"
                     /locus_tag="JQ356_002743"
     CDS             complement(7013..7513)
                     /gene="gspH"
                     /locus_tag="JQ356_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001115132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HAY4622779.1"
                     /translation="MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSEPPAKKAAQDF
                     LTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSAQVTVPKQVQML
                     LQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
                     AAQNAC"
     gene            complement(7517..7972)
                     /gene="gspG"
                     /locus_tag="JQ356_002744"
     CDS             complement(7517..7972)
                     /gene="gspG"
                     /locus_tag="JQ356_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003912123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HAY4622780.1"
                     /translation="MNSLSRTHKPRAGFTLLEVMVVIVILGVLARTVVPNLLGNKEKA
                     NRQKAISDIVALENALDMYRLDNGRYPTTEQGLEALIQQPANMADSRNYRTGGYIKRL
                     PKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ"
     gene            complement(7989..9212)
                     /gene="gspF"
                     /locus_tag="JQ356_002745"
     CDS             complement(7989..9212)
                     /gene="gspF"
                     /locus_tag="JQ356_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HAY4622781.1"
                     /translation="MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEA
                     RMNASAGGMLQRRRHAHRRVAAADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHV
                     KSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ
                     RQRLKSRLLQAMLYPLVMLVVATGVVTILLTAVVPKIIEQFDHLGHALPSSTRALIAM
                     SDALQASGVYWLAGLLALLVLGQWLLKNPTMRLRWDKTLLRLPVTGRVARGLNTARFS
                     RTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGSSLRAALAELRLFPP
                     MMLYIIASGEQRGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVI
                     AILEPMLQLNNMVGM"
     gene            complement(9212..10704)
                     /gene="gspE"
                     /locus_tag="JQ356_002746"
                     /pseudo
     CDS             complement(9212..10704)
                     /gene="gspE"
                     /locus_tag="JQ356_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525635.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
     gene            complement(10704..12764)
                     /gene="gspD"
                     /locus_tag="JQ356_002747"
                     /pseudo
     CDS             complement(10704..12764)
                     /gene="gspD"
                     /locus_tag="JQ356_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020234996.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
     gene            complement(12794..13623)
                     /gene="gspC"
                     /locus_tag="JQ356_002748"
                     /pseudo
     CDS             complement(12794..13623)
                     /gene="gspC"
                     /locus_tag="JQ356_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238556.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
BASE COUNT         3062 a         3936 c         3523 g         3144 t
ORIGIN      
        1 agcgctatgc gcatcctggg ggttcatcac cactgacggg aaactctgct ggcggaacat
       61 cgctttttgt aggtctttga cgtcgaaact gacatacaga tcgtgcatct cctgacacaa
      121 ctggcgcaaa gtgtagtcgc gatagcgcac cggatatttg ttataaacgc tcggcaacac
      181 ctcagccagc ggcgagtcat cctcaatatg ctgttcaaac tgcgccaaca tctctaccag
      241 ttgtgccagc ttctcgtggc tttccgccgg agttaataag aacagaatgg agttgagatc
      301 gcacttctcc ggcacaatgc cgttctcacg cagatagtgc gccagaatcg tcgccggaac
      361 gccaaagtcg ctatattcgc cggtttcggc attgatacct ggtgtagtga gtaacagctt
      421 gcacggatca acaaaatact gatccgcggc atatccttca aagccgtgcc acttcgcccc
      481 cggctcaaaa ctgaaaaaac ggcggtcgct ggctaacact gatgtcggat aatcctgcca
      541 caatttgcca tcaacaacgg gcgggataaa cgggcggaac agcttacagc gcgcaagaat
      601 agccttgcgc gactcaatac ccaactcaac gcactcagcc cacagccgac gcccactctc
      661 cccttcatga attttggcgt taacatccag tgcagcaaac agcggataga aagggctggt
      721 agaagcatgg agcataaagg cgttattcaa ccgcttatgc gggcaaaaac gcgcctgtcc
      781 gcggatatgg ttatcttttt tatggatctg cgacgtctgt gagaatcccg cctgctgttt
      841 gtgcaccgac tgagtcacaa agatctccgg atcgttttcg ttaagttcta atagcagcgg
      901 cgagctatcc gccatcatcg ggataaactg ttcgtaaccg acccacgcgg aatcaaacag
      961 aatgtaatca cacagatgcc caacggtatc gatcacctga cgggcgttat agacagttcc
     1021 gtcataggtt cccagctgaa taatcgccag gcgaaacggg cgcggcagct cggctttttc
     1081 tggcgcaacg tcgcgaattt gctggcgcag atactcttca ttaaaacagt gcgcatcaat
     1141 accgccaatg aaaccaaacg ggttgcgtga agcttccaga tagaccggcg tcgcccccgc
     1201 ctgaatcagc gcgccgtgat gattcgactt atggttgtta cggtcgaaga gcaccagatc
     1261 gccacgcgtt aacagcgcat tcgtcaccac tttattcgct gccgatgtgc cgttcagcac
     1321 aaaataggtt ttatcggcat gaaagacttt ggctgcgaat ttctgcgcat ctttcgccaa
     1381 taagcagatc gcccaatttt acgtcagcgt tacacatatc ggcgcgaaag acgttctcac
     1441 caaagaaatc gtaaaaatgg cgtccggcag gatgcttttt aaaaaacgca ccatgttgat
     1501 gtccagggca agcaaaggtg ctgttgccca tctcaacgta ctgcgtcagc gtgtcataaa
     1561 acggtggcag caaattctct tcatactgac aggctgcgga ttccagctcc agccactgct
     1621 gctcgttgcc gttgattacc gccgtaacgc ccgcaggtaa ttcaacagca tgttcggaat
     1681 acaaaaacac cggtagatga aaaccggtgc gcttaagcaa cgcaagaatg ccactgcgac
     1741 tatccgcagc ggtaatgacg actgccacga cgtccgtaaa atcagtatct cccaacgcca
     1801 ccacgcgacg atgagaagaa agtcgggata ccagttcact actggcggca atattcattg
     1861 atttcataag cgcaaacccg tttcggggaa gtaagaatac cggacaaggt ggaaaaccct
     1921 gccccatgag atatgggtca aactggtcac cagctccgac cgccagacat cagtaaaagc
     1981 agaaacgctc tgattttact gttgtcctgc agtgagcgtg cgttaacttc accgcatgag
     2041 cagtaacata gaaagggaaa cgtttcgcgc gaaacggcga taagcgagag aatgtaagga
     2101 ggtggcgtgc atcgggcaaa ctccgtacag agaggagaaa attcgcgcaa tcatggcacc
     2161 tttcgctaaa gcgtgcaagc caggactttg cgaccagaca agccatcaac aaggcaaaaa
     2221 gttcataata agaaaatcaa acaatacagt taacaggaac tcttgtggtc atcggccctt
     2281 ttatcaacgc tagtgcagtc ttactgggtg gcgttctcgg cgcactgctc agccaacgct
     2341 taccggaacg tatccgcatc tccatgacat ctatttttgg tctggcatcg ctggggattg
     2401 gtattttact ggttgtgaaa tgcgccaacc ttccagcgat ggttttagct acgctacttg
     2461 gcgctctaat tggcgaaatt tgtttgctgg agaaaggtgt caatacagca gtcgccaaag
     2521 cacaaaatct gtttcgtcac tcacgtaaga agccaacgca tgaatctttt attcagaatt
     2581 atgtcgcgat tattgtcctg ttttgcgcca gcggcaccgg gatcttcggg gcgatgaacg
     2641 aagggatgac cggcgatccg agtattttaa tcgccaagtc atttcttgat ttctttacgg
     2701 cgatgatctt cgcctgctcg ctgggtattg cggtgtcggt aattagtatc ccattactga
     2761 tcatccagtt aacgctggcg tgggctgccg cgctgatatt accgctgacc acaccgtcga
     2821 tgatggcaga cttcagcgcc gtaggcggtt tattgctgct ggcaaccgga ttacgcatct
     2881 gtggcattaa aatgttcccg gtggtcaaca tgcttccagc actccttctg gcaatgccgc
     2941 tttccgccgc ctggtttgcc tgacaatgcg tgcaatagcg gcaaagtgat gatagattgt
     3001 gcagtctgca gtaaattgaa gaaatttgat tgacgagacg aggcgaatca ggtttaatgc
     3061 gccccgttgc ccggatagct cagtcggtag agcaggggat tgaaaatccc cgtgtccttg
     3121 gttcgattcc gagtccgggc accactaatt cttaagaacc cgcccacaag gcgggttttt
     3181 gcttttggat ctgacaataa ccttcacgaa aaaagtttgc ttataaagtc tgggggaatt
     3241 actctcgcca cgttaacgag agtaatttta ttgatactaa tctcctgata ctttaccccc
     3301 gtccaaactc cagccgctgg acattcacca tcccagtctt ctcagcagca ctggcatcaa
     3361 tttgtgtcac ccgcagcgca tacttttcat ccagcgcgtt taaccagttc agcaggtcat
     3421 taaacaccac cggatctatc cagacctgaa tattctcccc acgctcggct atccgcttga
     3481 tgactaccga gtgcgcggaa gcactgtcac tgataacccg cgatacctgc gcaggcgttg
     3541 ttgtggcgga ttttcgcgcc gcaataatat ccggcgcggc gctcctcagt ctggtgttca
     3601 tcgccaccag ttgctgcaac attgtctcct gttgtactat ccgttcgctc aacggctgcc
     3661 agatgaggac gtaatatccg acgctaaaca ggaacaccac cgctgccagt aacatgccct
     3721 tttcacgcgg agaacgcccc gccaggtgtt gtgccagcca gtgttcgcca cggcttaact
     3781 ggcgttcacg ccattgctga aaatagtgaa taaatttatc gcgtaacatg ttatttcctc
     3841 cgcaacgtta cgccgccgga aaccgcatca ccctctttct gtaacgcgtc ctgttgcaca
     3901 acataatcgg ttgccagtgc actacgcagt ttgtcgaaac tggcaaagtt cgcggcccgt
     3961 agctggaggt gaagtatctg gcgtttttga tcaaaggtaa aaccacgcat ttcgatgtcg
     4021 gaaagtgacg ctgatttcag ggtgctggct atcgctgaca actcggcgag cagccgggta
     4081 tcgtcggcct gtgggcgata ttttttcagc gccatcgtca cctgagagcg taaattcaca
     4141 atccgcttct gctccgggaa caacgttaag aactgttcct ccgcctgggt gcggctttgc
     4201 gccacctgtt cgctgacgct ccataacgtc acgccccgct ccactgccag cgcaactaga
     4261 atcagcaata tcggcagaat catcacccgc cagcgcgccc actgttttcg gtagctgacg
     4321 cgaggctgcc acggccctgt cagcaggttc ccttccggtt cgccataagt ggtaacggcg
     4381 ggcagagctg taacggtcag gcgttcagcg tctgcgccag cccatgctga tagcttttcc
     4441 ggtgcaatgc cgactacggt tagcgaaagc ggtaaatcct gctcattgag ctgggcgcgg
     4501 aacatgaccg gagccagcgc ccgcccggcg ctccatcccc ggcattcatc aatgcggcag
     4561 ataacccgtt gcgcatcgcc agccataacc ccacaaggaa tggacatcca gtctggcgcg
     4621 acggtagcgc gggtgatgcc gttttcctgc aaccactgcg caatgttgcg catatgctgt
     4681 tggtgaatca ctgctacggt tgccagttgc tggtcgatat tcaacggggc gaaatgcagt
     4741 tcatcgatat cctggttcag ctcttcttcc agtaaggcgg gcagaatggt cggtatctgc
     4801 ttacgggcga catcaggcag ttcaacctgc cagacgctga tccattcgcc gggaatgtag
     4861 agtcgaatcg catcggtttg cagccattgc tggagctgtt cgttagcaac gtcagaccag
     4921 ataccgtgct ccacatcggg tgtacggcgc tgccaatgga tgggatcagc ggcgcaaagc
     4981 gggaaaaaaa tctcaaggat ggaactcact cactttctcc tgtctgatgc cagagaaccg
     5041 aaaagtgttg tgggcccatg cggacaatta acgagttcat cgtcagttca atctcattca
     5101 cggtgatatc tgaacgcagc cagaagtaat tgctgtccac gctcaggacg gtttttagct
     5161 gttttttagt acgctcatcg acgtcagcaa gtagcggctg tgcaagaaac tgatcgacat
     5221 cttcccagcc cttcgccgga cgttgttgta ataacgcccg cgcctgaacg gggcttaacc
     5281 acgggtcaaa cagcgcctca agaatcacac tttgcgtgac gtctaaagta ttgatgttga
     5341 tttgctggcg gatcatcggc agcgcacaga ccagcggttt cagtttttga taaagcccgg
     5401 cgtccattcc ctgtaccacg cgcatctcac tgatatcagc cagcggttga ttggcggcgt
     5461 agaacggcac cgaacgggcg agatactcgc tgtcttcacg gcccagacgt gtctgcacgc
     5521 tgcggtcctc gtcaataaac tcccacaggc tttcggctat cagttcggcc cgataagcag
     5581 gcacatccag gcgcgagatc agggcaatca actgttgtac cgcaagcgga cgcgacgccg
     5641 ttgtcggctg agcaagggca ttcaggttaa agcaagcctg tgcgtcacgc agggtgaccg
     5701 caatttgccc ctgcggcaga gggaagaaac gagggccgga tgcccacggc tgtgccagat
     5761 gcacgcgctt ttcatttttc aggctcagac tgagcgcgct cagcgccagg ctttccgcac
     5821 tggcgctgta ccacagcgcc tgctggtact cctgctggct gcgcgttcgc ccaagttgtt
     5881 gctgcattcg cccggaaagc gtgatggtta ccagcatcat aaccgccagc aataccagca
     5941 ccacgaccag tgccattccg cgttttggtg gtgaggtgat catgattatt gcggcccgcg
     6001 taacaaccag atgcgttcaa tctcgcccca ttgcggcgaa tgcagggtca tgcgtaccgc
     6061 cacagggatc gcctgtactg acgaccagct ctcctgccag cgcgtgccgt cgtagaactg
     6121 caaacggagc gaatcggccg gaatcaactt ttgcattgtc ggcttcacgc tgcctgcggc
     6181 atcggtcagc ggccaggcta accgttcgag ataaccgtca tgaatgcggt aaccgacggt
     6241 gagcagattg ctgcgcggca gacgcatcaa cgggttaacc acaccgccgc gcacaaaacg
     6301 cattccttca ctctcagacg ccagcacgcc agcgccagcc agtaaagctg gttcacgctg
     6361 gccctgatcg cctcttaccg gacgcggcat catttgggtc agatcgtggg tcagaaaact
     6421 catcgtttgc tgcatgaggt ttagtttttg atcgtgatcg gcgacggcgc tattcacgcg
     6481 cgtgacgccg ttagtcacct gctgcgccat cagtgccagc gaggcaaaaa tggcaattgc
     6541 caccaacatt tccagtaacg tgaaaccagc gcgagtcctt ctcactgttg gcctcccacg
     6601 gcgctaaacc aggcgcgtcg tgactgaatc accgacgaaa agtcttcgtg acggctgact
     6661 tcaatatcca ccgcctggag cagcgcgttg cctgtattca atgggattgt tcgccagtac
     6721 cagcggcttc ctgccatatc gctctcgccc tgatgcctga ccgcccgctg ctcacgggtc
     6781 atcaggtaga gcagcgcagt ctggttttca gctacccagc ccgctaccgt tttttcctca
     6841 agaacgtgct gattactcag cgcaccgctg gcaatctgta acaccgccgt ggcagccagc
     6901 gcaaaaatcg ccagcacgag catcacttcc agcaaggtaa atccgcgctt catggcatcc
     6961 tctcatcaca ttgattgagg gataacgcgc catcgtgtgc cagctttacc gctcaacatg
     7021 cgttttgcgc cgccgagtag aagcgcagcg taaacggcgt ggcgggttca aaaggcgaaa
     7081 aacggatctg cggcgtcttc tttttcgcct ctttttgcaa ctccagttca atatcgtgca
     7141 gcgtcaggcg acgacgttgc agctccagcg catattcctt ctgccagata tcacttccgg
     7201 gttgtaacag catctgcacc tgtttcggca ccgtaacctg tgccgataac cgggtcgcag
     7261 aaacgggcaa ccactgcccc tgacgacgct gcataaactg atagccaggc gggtcgatta
     7321 gcacaccgag tgtctgtcct tcaatcactg ccctgtcctt aaactgcgca aagcgagtca
     7381 gaaaatcctg tgccgctttt ttcgcgggcg gttcagaatc ggtcgcaaac gtctgtacca
     7441 cgcccgcact ggcaaggccg ataaggaaaa tcaccagcat gatttccaga agtgtgaatc
     7501 cgcgttcagg cactgcttac tgaaactcct gcaaattcca gttaccgata tctgcgccag
     7561 cgccttcccc gttttcctga ccatccgccc ccagggtata aacatcaaac agtccttttt
     7621 cacccgggct gagatactga taatcattgc cccacggatc ctttggcagt cgtttgatgt
     7681 atccaccagt acggtagttg cgggagtccg ccatattggc tggctgctgg atcagcgctt
     7741 ccagcccctg ttctgtggtc ggataacgcc cgttatccag tcggtacata tctagtgcgt
     7801 tttccagcgc cacgatatcg ctgatggctt tttgccgatt ggctttctct ttgttgccca
     7861 acaggttagg caccaccgtc cttgccagga cgccaagaat aacaatcacc accatcactt
     7921 ccagcagggt aaaacctgcc cgtggtttgt gtgtgcggga taacgaattc atgtgataac
     7981 tccgtaaatt acattccaac catattattc agttgcagca tcggctcgag gatggcgatg
     8041 acaataaaca gcaccacgcc cgccatcatc accaccagcg caggctcaaa cagccccaac
     8101 gccagcccca cctgggtatc aaattcccgt tcctggttaa cagcggcctg ctcaagcatg
     8161 gtttccagtt cgcctctctg ttcgccggaa gcgataatgt acagcatcat cggcgggaac
     8221 aggcgcaact ccgccagcgc ggcgcgcaga ctgcttcctt cgcggacgcg atctgccgcc
     8281 agcagcagtt gttgttcgac atagcgattt gccgacacgg cggcagcggt ctgaatgcct
     8341 tccagtagcg gaacactgct ggcggtgagg atgcttaatg tgcgggaaaa acgcgccgta
     8401 ttcagcccgc gcgcaacacg gcccgtcacg ggcagacgca gcaaggtttt atcccagcgc
     8461 aggcgcatag taggattttt aagtagccat tgccccagca ccagaagcgc cagcaatccc
     8521 gccagccagt aaacgccgct ggcctgtaac gcatcactca tagcgataag cgcacgggtg
     8581 gaggagggta gcgcgtgtcc gagatgatca aactgttcga tgattttcgg caccactgcc
     8641 gtcagcaaaa tagtgaccac gcccgttgcc accaccagca taaccagcgg atagagcatg
     8701 gcctgcaata gacgtgattt caggcgctgt cgctgttcgg tgtaatctgc caggcgattg
     8761 agcaccacgt cgagatgccc ggatttttct ccggcagcga ccatcgaaca aaacagggaa
     8821 tcaaagacgc ggggatgttc gcgcaggctg tccgacaggg tataaccttc ctgaatccgg
     8881 ctgcgcagcg ccattccgag gctcttcaca tgcagttttt cactttgctc actgaccgcc
     8941 tgcaagcagg tttccaacgg cattgctgcc tgcaccagcg ttgccagttg gcgcgtgaac
     9001 agcgccagat ctgccgccgc cacgcgacga tgtgcgtgcc gccgacgctg caacattccc
     9061 cctgccgatg cattcatcct ggcttcaatg tgcacgggga taagctcttt accgcgcaac
     9121 aactggcggg catgacgcgc ggaatccgcc tcaatcatgc ctttggtttt gcgaccatta
     9181 cgctccagcg cctgatagta aaacagtgcc attacgcctc catggttacc cgcagaactt
     9241 catcgagaga ggtttctccg gcgagcactt tctcaatgcc gttgctgcgg atacccgcag
     9301 agtgttgccg gacataacgt tccagctcca gctccccggc ctgacggtgg atcaaatcac
     9361 gcaatgtggc atccaccacg tcagctcatg gatggcagtc cgtccgcgga aacctttgtg
     9421 attacaggcg gggcagccct gcggatggta cagagtgacg gttcgcgcat cggtaatgcc
     9481 cagcaggcgt ttttcttcgt cagtggcagg cgcggcctga cggcagtcgg gacacagcgt
     9541 gcggaccagt cgctgcgcca tcacgcccgt cagactggaa gagagcagga aaggctccac
     9601 gcccatatcc tgcaaacgcg tgatcgcccc caccgccgtg ttggtatgca gcgtggaaag
     9661 gaccaggtgt ccggtaagcg atgcctgaac agcgatttct gcggtttcgg tatcgcggat
     9721 ttcaccgacc atcaccacat ccgggtcctg acgcaaaatc gcgcgcaggc cacgggcgaa
     9781 ggtcatgccg acgcgggtgt taacctgtgt ctgaccgatc ccttcaatca tgtattcgat
     9841 ggggtcttca accgtgagaa tgttacgcga atggttgttc agctcctgca atccggcgta
     9901 cagcgtggtg cttttgccgg aacccgtcgg ccccgtcacc agaaagatgc cgtgcggttt
     9961 gtgtaacagc tggcgcaact gcacggtcag ttgctggcta agccccagac gctccagcgt
    10021 caggcgggcc tggtttttgt ccagcagtcg cagcaccacg cgctcgcccc aggcagaagg
    10081 catggtggag acacgcacgt caatcgcccg gccgcccagc agcagcgcaa tacgtccatc
    10141 ctgcggtacg cgcttttcgg cgatatccag ccgtgccatc accttgatac gcgataccag
    10201 cagcgaggcc agtttgcgcc ccgggcgcag catttcatgt aatgtgccgt caacgcgaaa
    10261 acggatcacc agactctttt caaacgtctc gatgtggata tccgaagcgc cttctttaat
    10321 cgcctctgcc agcatggcgt tgatcagttt gatgatcggc gcatcgtcgt cactttccag
    10381 cagatcttcc gtttctggca gttcttccgc gagagtaaaa aagtcctcag cagaaccgag
    10441 atcttccatc agctggcgag cctcggaaga gtcccgctgc cagaccgcat tcagccgctg
    10501 ttcaaattcg gcctcgtcga tttgccgcag cgtaaagggc gcgttcagcc cccgctgcag
    10561 ctcctgcaaa acagagagcg atagcggatg aacgtggagg atctccagcg acgcttcgca
    10621 ccatgccacc aggctaaacc gacggctgaa actgtagggc agacgcacgg tcttggcggt
    10681 ggtttcctgt gctacaggca ccattaacgc gttctcccgg cattgaggaa cgcgcgaact
    10741 tccggcggta aggcctggtt ttgcgctggc agtaccggct gtgcggtgtg cggcatcagg
    10801 cttaaacctt gctcatcacg atagatctgt tcggcgcgca tatagttata tttgcgctgc
    10861 gacacgccgt ctgccgccat accgtcatgc agaatggtcg ggcggataaa caccatcagg
    10921 ttacgttttt cttttttatc cgccgtcgat ttaaacaggt taccaatcaa tgggatatcg
    10981 cccagcagag gcactttcgc cacgctttct cccgcctgat cgtccatcag accaccaagc
    11041 acaatcagct caccatcgtt agccagcacg gtggttttca gtttgcgctc accaaacacc
    11101 acgtcgaggc tggtctgtcc ttccaccttc gagacttcct gctcaatcac catctgtacc
    11161 gcgttacctt cgttaatctg cggcgtgact ttcagcatga tgccgacttt tttcctttct
    11221 actgtattga aaggattgct gttattggag ccaacggtag agccggttaa taccggaacg
    11281 tcctagccca ccatgaagaa ggcttcctgg ttgtccagcg tagtgatgct cggcgtggag
    11341 agaacgttcg agctggagtc gtttttaacc gcctgcacca gtgccatcca gtcgcctttc
    11401 accacgccaa ccgccgtacc gctaaatcca gaaagaagct gggcgagtgt ggagagatcg
    11461 ccgttggtat ccggattaat ggtggtagcg ccgttttcac tgatcaccgt cgagcctttc
    11521 tgcggtttcg cctgagaaat ggctgccccc agcgtaccga tagggatctg cgtaccatta
    11581 gcaaactgca ttaatccggc atctttcgat gcccactgca cgccgaagtt gatattgcta
    11641 ccttcggcaa cttccacgat caacgcctcg acgtgcacct gagcacggcg aatatccagt
    11701 tgttcaatta cgctttgcag cgactgcatg atgtcctgcg gcgcggttac aatcagggca
    11761 ttactgtgtt tgctggcggc gatggataca acctcacgcc cgctaccgac cgtgccttcc
    11821 gcctcttctt tagccgccgt gagcgtgccg ctgacctgtt tcagcacatc gaccagatct
    11881 tcggctttgc tgtatttgag atagaaaacc tggctgttgc cgctgcgttc catttctgag
    11941 tccagccgac ggatcaggcg gcgcattttg tcccgcgtgg ccgggtcacc actgacaatc
    12001 acactgttgg tgcgttcgtc ggcgacaatt tgagatttca gcgtcgcagg ctggttctcg
    12061 ccgctgtttt tcgtcaggct ttccagcacg cgggcgattt ccgaagccga ggcgttatcc
    12121 agcgggatca cctcttcggt gcgattaccc gcgtgatcca cgcgctggat cacttccgtc
    12181 aggcgctcca caacggaggc gcgtccggtg agcataatca cgttggaggg atcgtaatta
    12241 acaacgttgc ctgagcctgc gctgtcgatc atctggcgca gaatcggtgc cagctcgcgt
    12301 accgacacat tacgtaccgg cactactttg gtgaccattt catcgcccgc gtagttgtcg
    12361 ctgccttcac cgaccagcgg cagcggctcg actttcgcag cgctggattt caccaccttc
    12421 agcacgtcgt tttccatcgg tacgacggca tacccctgtg cttccagcag gttaaggaat
    12481 agctggtaat actggcgttc attgagcggg gtcatggtgc gaatactcac tttcccctgt
    12541 acgcccggcc ccataatgat ggttttatta aggttagcgc cgacggtttc gatgaacgat
    12601 ttcaggtcgg tatctttaaa attagcggtg aaagtggctt cttccgccca gaccggtgaa
    12661 ctgcataatg ccgctgccag caccagcggc agtaaacgct tttttgtttt gaggccagtt
    12721 gtcttcttac gccagaccga caaggtaata tcacgccaaa acacgatgaa tgattctcct
    12781 ggattaaatg cggttagcgc agcgcgatgg aaatgtcgtg gcgcgcaccc ttgcgtaaaa
    12841 ccgtaagttg aatggaatcc attgaaggta actgccgcat cagagcaatc attgctcgtg
    12901 gatcagtgaa atcctgctga tttagcgcaa tggcgatatc gccttccttg aaaccgctgg
    12961 catcgaacag agaacgatct gcccccggct tcactgcata accgacaatt ccctccttac
    13021 gcacaggcgt aagctggata tagttaaaaa ttttctgcgg atctttcgcc agtgcctgac
    13081 gcacggcagt cggtatctca actggcgcac tgacagcagg ttcagcaaca gcttgctttg
    13141 cttcgtcact gacagctttt ttgttggtcg cggcaacggt ggaacgctcc tcttcagcca
    13201 ggctcaggcg ctctattttt ccctgatagc gcagcatcac atggtcgcga ttgatttcct
    13261 caatcaccgc gttgtgcgag ccaagcgttt caccctgcaa atagacctgc tgtttaccgc
    13321 cttcttcaat aaccgcgccg ggtctggcac caaaggcgat cccgcgcgca ccacattaag
    13381 acgcgtttct gccacaggca caggttcggg ttgttttacc ggcgtggcga cgggctgata
    13441 tttgccaaac cagttttgct ggctgattaa ttgcacgtca tttttatcga acgtttttgc
    13501 atccgcacgg ggcggtttat tcgccgatgg ggaaacagcc gtatattccg cagaaaagga
    13561 gaaatagcgc cagagtgaat gcgccacttt tgcagaaata ataagcagca tcagccagaa
    13621 catcccgcgt acaatttttg gtaatgactc caacttactg atagt
//
LOCUS       DADKRT010000110        13588 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.111, whole genome shotgun sequence.
ACCESSION   DADKRT010000110 DADKRT010000000
VERSION     DADKRT010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13588
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.111"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            307..642
                     /locus_tag="JQ356_002749"
     CDS             307..642
                     /locus_tag="JQ356_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004856597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HAY4622782.1"
                     /translation="MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDTEPAQESDELIV
                     KDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
     gene            802..1245
                     /gene="yjdN"
                     /locus_tag="JQ356_002750"
     CDS             802..1245
                     /gene="yjdN"
                     /locus_tag="JQ356_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HAY4622783.1"
                     /translation="MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDS
                     AENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRW
                     FDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ"
     gene            1378..2166
                     /gene="phnC"
                     /locus_tag="JQ356_002751"
     CDS             1378..2166
                     /gene="phnC"
                     /locus_tag="JQ356_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HAY4622784.1"
                     /translation="MQTIIRVEKLAKTFNQHQALHAVDLNIHHSEMVALLGPSGSGKS
                     TLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLS
                     VLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
                     VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALR
                     YCERIVALRQGHVFYDGSSQQFDNERFDHLYRSINRIEENAKAA"
     gene            2191..3207
                     /gene="phnD"
                     /locus_tag="JQ356_002752"
                     /pseudo
     CDS             2191..3207
                     /gene="phnD"
                     /locus_tag="JQ356_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418529.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
     gene            3333..4112
                     /gene="phnE"
                     /locus_tag="JQ356_002753"
     CDS             3333..4112
                     /gene="phnE"
                     /locus_tag="JQ356_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HAY4622785.1"
                     /translation="MQTITIAPPKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDG
                     GNMATFVADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWW
                     VYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAI
                     EPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIG
                     VTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI"
     gene            4133..4858
                     /gene="phnF"
                     /locus_tag="JQ356_002754"
     CDS             4133..4858
                     /gene="phnF"
                     /locus_tag="JQ356_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HAY4622786.1"
                     /translation="MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAAR
                     FEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPT
                     SEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGIALCLIDHYFADLTLWPTLQ
                     RFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDG
                     ESSPAEYSVSLTRADMIEFTMEH"
     gene            4859..5311
                     /gene="phnG"
                     /locus_tag="JQ356_002755"
     CDS             4859..5311
                     /gene="phnG"
                     /locus_tag="JQ356_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HAY4622787.1"
                     /translation="MHADIATRQHWMSMLAHSQPAELAARLNALNITANYEVIRTAET
                     GLVQIQPRMGGTGERFFAGDATLTRAAVRLTDGPLGYSWVLGRDKQHAERCALIDALM
                     QQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA"
     gene            5308..5892
                     /gene="phnH"
                     /locus_tag="JQ356_002756"
     CDS             5308..5892
                     /gene="phnH"
                     /locus_tag="JQ356_002756"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HAY4622788.1"
                     /translation="MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPL
                     NIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFHTNAPLVNQSELATFAVTDEAIS
                     SEQLNALSSGTAVAPEAGATLILQVVSLSGGRMLRLTGAGIAEERMIAPQLPECILHE
                     LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC"
     gene            5892..6950
                     /gene="phnI"
                     /locus_tag="JQ356_002757"
     CDS             5892..6950
                     /gene="phnI"
                     /locus_tag="JQ356_002757"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate synthase subunit PhnI"
                     /protein_id="HAY4622789.1"
                     /translation="MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLA
                     VDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLE
                     RRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA
                     RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRN
                     HPFAGEIRSGYIDVSIMPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLV
                     FGMSERKAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVD
                     FQAELELLKRLQQEQNHG"
     gene            6943..7788
                     /gene="phnJ"
                     /locus_tag="JQ356_002758"
     CDS             6943..7788
                     /gene="phnJ"
                     /locus_tag="JQ356_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HAY4622790.1"
                     /translation="MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPM
                     PYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDAT
                     LIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED
                     IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPP
                     FTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQS
                     EAKNQ"
     gene            7785..8543
                     /gene="phnK"
                     /locus_tag="JQ356_002759"
     CDS             7785..8543
                     /gene="phnK"
                     /locus_tag="JQ356_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HAY4622791.1"
                     /translation="MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGK
                     TTLLKSISARLTPQQGEIHYESRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSA
                     GGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNL
                     VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLV
                     MKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN"
     gene            8654..9334
                     /gene="phnL"
                     /locus_tag="JQ356_002760"
     CDS             8654..9334
                     /gene="phnL"
                     /locus_tag="JQ356_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HAY4622792.1"
                     /translation="MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSG
                     SGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVI
                     PRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI
                     ARGFIVDYPILLLDEPTASLDAKNSAAVVELIHEAKARGAAIVGIFHDEAVRNDVADR
                     LHPMGASS"
     gene            9331..10467
                     /gene="phnM"
                     /locus_tag="JQ356_002761"
     CDS             9331..10467
                     /gene="phnM"
                     /locus_tag="JQ356_002761"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HAY4622793.1"
                     /translation="MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEG
                     GWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLNAVAIGDVR
                     DGGDQLENLEKMINTIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLV
                     SLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAAL
                     CRARQIALASHDDATHAHVAESHQLGSVIAEFTTTFEAAEASRKHGMNVLMGAPNIVR
                     GGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDESNRFTLPQAVRLVTKN
                     PAQALNLQDRGVIGEGKRADLVLAHRQGNHIHIDHVWRQGKRVF"
     gene            10467..11024
                     /gene="phnN"
                     /locus_tag="JQ356_002762"
     CDS             10467..11024
                     /gene="phnN"
                     /locus_tag="JQ356_002762"
                     /EC_number="2.7.4.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 1,5-bisphosphokinase"
                     /protein_id="HAY4622794.1"
                     /translation="MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASA
                     GSENHIALSEREFFTRAGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHL
                     PQARARYQSALLPVCLQVSPEILRQRLKNRGRENTSEINARLARAARYTPQDCHTLNN
                     DGSLRQSVDTLLTLIHQKEKHHACL"
     gene            11011..11460
                     /gene="phnO"
                     /locus_tag="JQ356_002763"
     CDS             11011..11460
                     /gene="phnO"
                     /locus_tag="JQ356_002763"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoalkylphosphonate N-acetyltransferase"
                     /protein_id="HAY4622795.1"
                     /translation="MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRD
                     PSMRYPSMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQACGLNVSSKL
                     LAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL"
     gene            11462..12220
                     /gene="phnP"
                     /locus_tag="JQ356_002764"
     CDS             11462..12220
                     /gene="phnP"
                     /locus_tag="JQ356_002764"
                     /EC_number="3.1.4.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism protein PhnP"
                     /protein_id="HAY4622796.1"
                     /translation="MSLTLTLTGTGGAQGVPAWGCECVACARARRSPQYRRQPCSGVV
                     KFNDAITLIDAGLHDLADRWPPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPP
                     DEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVA
                     WLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALNQVIRSPRV
                     ILTHISHQFDAWLMENALPSGFEAGFDGMEIGVA"
     gene            complement(12367..12696)
                     /gene="yjdP"
                     /locus_tag="JQ356_002765"
     CDS             complement(12367..12696)
                     /gene="yjdP"
                     /locus_tag="JQ356_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YjdP"
                     /protein_id="HAY4622797.1"
                     /translation="MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDR
                     GRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERR
                     MEDEYGR"
     gene            complement(12765..13082)
                     /locus_tag="JQ356_002766"
     CDS             complement(12765..13082)
                     /locus_tag="JQ356_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase"
                     /protein_id="HAY4622798.1"
                     /translation="MQPVFLFKKRTGAMGGHVAGTAGFCVAVPAFYSWSMSEVIDKDT
                     RSSERTDYPHYASEVALAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQ
                     RRN"
     gene            13335..>13588
                     /locus_tag="JQ356_002767"
     CDS             13335..>13588
                     /locus_tag="JQ356_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622799.1"
                     /translation="MNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVN
                     QNYAKSLPFSDRQDFDDAQRGFIAPLLDEGILRDANGKPY"
BASE COUNT         3059 a         4027 c         3746 g         2756 t
ORIGIN      
        1 attttatatt tagtgtgttg ttttttatca gaataaataa cgtcttctga tgcgtttaaa
       61 acgtcagaaa gataaaaata tcatgtgaat aaaaaaagaa caggtagagc attaacatta
      121 tcttaaataa taaatagagg caaaaagatt attttctttt tgcgtttcct ttcaaatgaa
      181 aacgatcgtc gtctaaaatc agcagtaccc ccgacaaact cagggatttt gtgtataatt
      241 gcggcctttt tcggcaatct gccgtttttt ggcgcttttg ccctgctgac ttttgaggaa
      301 atccacatgt cattaccaca ctgcccaaaa tgcaactccg aatacactta cgaagataac
      361 ggcatgtaca tctgcccgga atgtgcctac gaatggaacg acacagaacc tgcacaggaa
      421 agcgacgagc tgatcgttaa agatgctaac ggcaatctgc tggctgacgg cgacagcgtt
      481 accatcatta aagatctgaa ggtgaaaggt agctcttcga tgctgaaaat tggcaccaaa
      541 gtgaaaaaca tccgcctggt tgaaggcgac cataacatcg attgcaaaat cgacggtttt
      601 ggtccgatga aactgaaatc tgagtttgtg aaaaagaact gattgtattg tgatcggtaa
      661 gccggataag gcgctcgcgc cacatccggc aacgatgccg actgcctgat gcgacgctga
      721 ccgcgcctta tcaggcttcc ctctcatctg tataaatttc gaactacact taactggctt
      781 ctcttaactg aggtcaccat catgccgtta agtccctacc tctcttttgc cggtaactgt
      841 tccgacgcga ttgcctatta tcaacgtacg ttgggcgcgg aactgctcta taaaatcagc
      901 ttcggcgaaa tgccaaaatc agcgcaggac agcgccgaga actgcccttc cggaatgcaa
      961 tttcccgata ccgccatcgc ccacgccaac gtgcgcattg ccggaagcga catcatgatg
     1021 agcgatgcta taccgtcagg aaaagccagc tactccggct ttacgctggt gctcgattcg
     1081 caacaggtcg aagaaggaaa acgctggttt gataaccttg ccgctaacgg aaaaattgaa
     1141 atggcctggc aggaaacttt ctgggcgcat ggcttcggca aagtcaccga taaatttggc
     1201 gtaccgtgga tgattaatgt cgtcaaacaa caaccaacgc aataacccgc cgggaggccc
     1261 gccctcccgc actgtcatcg aattcccgtt aactcttcat ctgttagtca cttttaatta
     1321 accaaatcgt cacaataatc cgccacgatg gagccacttt tttagggagg ctgcatcatg
     1381 caaacgatta tccgtgtcga gaagctcgcc aaaaccttca atcagcatca agcgctgcat
     1441 gcggttgatc tgaacattca tcacagtgaa atggtggctc tgcttgggcc gtcgggttcc
     1501 ggcaaatcca cacttttacg tcacttaagc ggtttgatta ccggcgataa atccgccggc
     1561 agccatatcg agctgctggg ccgcacagtc cagcgcgaag gccgtctggc gcgcgatatc
     1621 cgcaaaagcc gcgcccatac cggctacatc ttccaacaat tcaacctggt gaatcgcctg
     1681 agcgtactgg agaacgtgct gattggcgcg ctcggcagca cgccgttctg gcgcacctgt
     1741 tttagctggt tcacccgcga gcagaaacaa cgcgcgttac aggcgctgac ccgcgttggc
     1801 atggtgcatt ttgcccatca acgcgtttcc accctatccg gcggacagca gcagcgtgtg
     1861 gcgattgccc gcgcgctgat gcagcaggcg aaggtgattc tggccgatga acccatcgcc
     1921 tcgctggacc cggaatccgc ccgcatcgtg atggacaccc tgcgcgacat caatcagaac
     1981 gacggcatca ccgtagtcgt cacgctgcat caggtggatt acgccctgcg ctactgcgaa
     2041 cgcatcgtcg ccctgcgcca ggggcacgtt ttctacgacg gcagcagcca acagtttgat
     2101 aacgaacgtt ttgaccatct ctaccgcagc attaatcgca tcgaagagaa cgcgaaagct
     2161 gcctgacatc cccatcattg aggaaaacga atgaacgcta agataattgc ctcgctggcc
     2221 ttcaccagca tgttcagcct cagcaccctg ttaagcccgg cacacgccga agagcaggaa
     2281 aaggcgctga atttcggcat tatttcaacg gaatcacagc aaaacctgaa accgcaatag
     2341 acgccattct tacaggatat ggagaagaag ctgggcgtga aggtgaacgc cttctttgcc
     2401 ccagactacg caggcattat ccagggaatg cgcttcaata aagtggatat cgcctggtac
     2461 ggcaacctgt cggcaatgga agcggtggat cgcgccaacg gccaggtctt cgcccagacg
     2521 gtcgcggcgg atggatcgcc aggttactgg agcgtgttga tcgtcaacaa agatagtccg
     2581 atcaacaacc tgaacgatct gctggcgaag cggaaagatc tcaccttcgg caatggcgat
     2641 cctaactcca cctctggctt cctcgtcccc ggttactacg tctttgccaa aaacaatatc
     2701 tccgccagcg actttaagcg caccgtcaac gctgggcatg aaaccaacgc gctggccgtc
     2761 gccaacaagc aggtggatgt tgccaccaac aacaccgaaa acctcgacaa gctgaaaacc
     2821 tccgcgccag agaagctgaa agaactgaag gtgatctgga agtcgccgct gatcccaggc
     2881 gatccgatcg tctggcgcaa gaatctctcc gaaaccacca aagacaagat ctacgacttc
     2941 tttatgaact acggaaaaac gccggaagag aaagcggtgc tggaacgcct gggctgggcc
     3001 ccgttccgcg cctccagcga cctgcaactg gtgccgattc gccagctcgc actgtttaaa
     3061 gagatgcagg gcgtaaaaag caataaagga ctgaatgagc aggacaagct ggcgaaaacc
     3121 accgagattc aggcgcagct ggatgacttg gaccgcctga acaacgcgtt aagcgcgatg
     3181 agttcggtga gtaaagcggt gcagtaatgt gctcgatcgg tcccctctcc cttgagggag
     3241 agggttaggg tgagggggaa atgcgcacgc tgatgccctc atcccggccc tctcccacag
     3301 ggagagggag aaaacattaa acggagccaa acatgcaaac catcaccatc gccccaccca
     3361 agcgtagctg gttctcgctt ctgagctggg ccgttgttct cgccgtgctg gtcgtctcgt
     3421 ggcagggcgc ggaaatggcc ccgcttacgc tgattaaaga cggcggcaac atggcaacct
     3481 tcgttgccga cttcttcccg cccgatttca gccagtggca ggattacctc accgaaatgg
     3541 ccgtcacgct gcaaatcgcc gtctggggca ccgcgctggc agtggttctc tccatcccct
     3601 tcggtctgat gagcgccgaa aacctggtgc cgtggtgggt ttaccagccc gttcgccgcc
     3661 tgatggatgc ctgccgcgcc attaacgaaa tggtcttcgc catgctgttc gtggtcgccg
     3721 tcggtctcgg cccgttcgct ggcgtgctgg cgctatttat ccacaccacc ggcgtgctct
     3781 ccaagctgct ttccgaagcg gtggaagcga tcgaacccgg cccggtagaa ggcattcgcg
     3841 ccaccggcgc caacaagctg gaagagatcc tttacggcgt gctgccacag gtaatgccgc
     3901 tgctgatctc ctactccctc tatcgcttcg aatccaacgt ccgctcggcg accgtcgtcg
     3961 gcatggtcgg tgcaggcggg atcggcgtca ccctgtggga agcgattcgc ggttttcagt
     4021 tccaacaaac ctgcgccctg atggtgctta tcatcgtcac ggtcagcctg ctggatttcc
     4081 tctctcaacg gttgcgtaag cactttatct gataagcgag gcattgatat ctatgcactt
     4141 gtctacacat ccgaccagct acccaacacg ctatcaggag atagccgcaa aacttgagca
     4201 ggagcttcgt caacactatc gctgcggcga ctatcttccc gccgagcagc agctggcggc
     4261 gcgctttgag gtaaatcgcc acaccctgcg ccgcgccatc gaccaactgg tggaaaaagg
     4321 ctgggtacag cgccgtcagg gcgtcggcgt gctggtgctg atgcgcccgt tcgattaccc
     4381 gctcaacgcc caggcgcgtt ttagccagaa cctgctggat cagggcagcc atcccaccag
     4441 cgaaaaactg ctgtcggtgc tgcgcccggc atctggtcac gtcgctgacg cgctggggat
     4501 aaccgagggg gagaacgtca tccacctgcg caccctgcgc cgggtcaacg gcatcgcgct
     4561 ctgtttaatc gaccactact ttgcggacct caccctttgg ccgacgctgc aacgcttcga
     4621 cagcggctcg ctgcacgatt ttctgcgcga gcaaaccggg attgcgctgc gccgcagcca
     4681 gacgcggatc agcgcccgcc gcgcccaggc caaagagtgc cagcgtcttg aaatcccgaa
     4741 tatgtcgccg ctgctgtgcg tgcgcaccct taaccaccgt gacggtgaaa gcagcccggc
     4801 ggagtactcc gtcagcctga cgcgcgccga catgattgaa ttcactatgg agcactgaat
     4861 gcacgcagat atcgcgaccc gccagcactg gatgtccatg ctggcgcaca gccaaccggc
     4921 tgaactggca gcccgcctga acgcgctgaa catcaccgcc aactatgaag tgatccgcac
     4981 cgccgaaacc ggcctggtac agattcagcc gcgaatgggc ggtaccggcg aacgcttttt
     5041 tgccggcgac gccacgctga cccgcgccgc cgtacgcctg actgacggcc ccctcggcta
     5101 cagctgggtg ctggggcgcg acaaacagca cgccgaacgc tgcgcgctga ttgacgcgtt
     5161 gatgcagcaa tctcgccatt ttcaaaactt atcagaaacc cttattgccc cactggacgc
     5221 tgaccgtatg gcacgcattg ccgcacgcca ggccgaagtg aacgccagcc gggtcgactt
     5281 ctttacgatg gttcgcggag acaacgcatg accctggaaa ccgcttttat gcttcctgtg
     5341 caggatgccc agcacagttt tcgtcgcctg ttaaaggcca tgagcgagcc gggcgtgatt
     5401 gtcgccctgc atcagctcaa acgcggctgg cagccgctga atatcgccac caccagcgtg
     5461 ctgctgacgc tggctgataa cgacacgccg gtgtggcttt ccgcgccatt aagtaacgat
     5521 atcgtcagcc agagcctgcg ttttcatacc aacgcgccgc tggtcaatca gtcggaactg
     5581 gcgaccttcg cggtaacgga tgaggcgatt tccagcgaac agctcaacgc tctttccagc
     5641 ggcaccgctg ttgcgccgga agcgggcgcg acgctgattt tacaggtcgt cagcctgagc
     5701 ggcgggcgca tgctgcgcct tactggcgcg ggtattgccg aagaacgaat gatcgctccg
     5761 cagctgccgg agtgcattct gcacgaactc accgagcgcc cgcacccgtt cccgctcggc
     5821 atcgacctga tcctgacctg cggcgagcgg ctgctggcta tcccgcgaac cactcatgtg
     5881 gaggtgtgct gatgtacgtt gccgtgaaag ggggcgagaa ggagatcgac gccgcccacg
     5941 ccctgcaaga gagccgacgc cggggcaata ccgatttgcc tgaactgagc gtcgcccaga
     6001 ttgaacagca gcttaatctt gcagtagatc gcgtgatgac cgaaggcggc attgccgacc
     6061 gcgaactggc ggcgctggcg ctgaaacagg ccagcggcga taacgtcgaa gcgattttcc
     6121 tgctacgcgc ctaccgcacc acgctggcga agctggcggt aagcgagcca ctcgacacca
     6181 cggagatgcg tctcgaacgg cgtatttcag cggtttataa agatattccc ggcggtcagt
     6241 tgcttggccc aacctacgac tacacccatc gcctgctcga tttcaccctg ctggcaaacg
     6301 gcgaagcgcc gacgctgacc accgcagaca gcgaacaatc cccgtcgccg cacgttttca
     6361 gcctgctggc gcgtcagggg ctggcgaagt ttgaagagga tagcggcgca cagccggatg
     6421 acatcacccg cactccgcca gtttacccct gttcacgttc ttcccgtttg cagcagttga
     6481 tgcgcggcga cgaaggctat ttgctggcgc tggcctactc tacccagcgc ggttacggac
     6541 gcaatcaccc gttcgcgggc gaaatccgca gtggttacat cgacgtgtcg attatgccgg
     6601 aagagctggg atttgcggtg aacgtcggcg aactgctgat gaccgagtgt gaaatggtca
     6661 acggttttat tgacccgccg gatgagccgc cgcacttcac gcgcggctac gggctggtgt
     6721 tcggcatgag cgagcgcaaa gcgatggcgc tggttgaccg tgcgttgcag gctccggagt
     6781 acggcgagca cgcgacaggc ccggcgcagg atgaagagtt cgtgctggca catgccgaca
     6841 acgtcgaagc cgcaggcttt gtctcgcacc tcaaactccc ccactacgtc gatttccagg
     6901 ccgaactgga gctactcaaa cgtctgcaac aggagcagaa ccatggctaa tctgagcggc
     6961 tacaactttg cctacctcga cgagcagacc aaacgcatga tccgccgcgc catcttaaaa
     7021 gcggtggcga tccccggtta tcaggtgccg tttggcgggc gcgagatgcc gatgccctac
     7081 ggctggggaa ccggcggcat tcagctcacc gccagcgtga ttggcgaaag cgacgtgctg
     7141 aaggtgattg accagggcgc agacgacacc accaacgccg tgtcgattcg caacttcttt
     7201 aagcgcgtga ccggggtaaa caccactgaa cgtacggacg atgcgacgct tatccagacg
     7261 cgccatcgca tccccgaaac gccgctgacc gaagatcaga tcattatctt ccaggtgccg
     7321 atccccgaac cgctgcgctt tatcgagccg cgcgaaacgg aaacccgcac catgcacgcg
     7381 ctggaagagt acggcgtgat gcaggtgaaa ctgtatgaag atatcgcccg cttcggtcat
     7441 atcgccacta cctacgccta tccggtgaag gtgaacgggc gctacgtgat ggacccgtcg
     7501 ccgatcccga aattcgataa cccaaaaatg gacatgatgc ccgccctgca actgttcggc
     7561 gcggggcgcg agaagcgcat ctatgcggtg ccgccgttta cccgcgtgga aagtctcgat
     7621 ttcgacgatc acccgttcac cgttcagcag tgggatgagc catgcgccat ctgcggatcg
     7681 acccacagct atcttgatga agtggtgctg gatgacgccg gaaaccgcat gtttgtctgc
     7741 tccgataccg attattgccg ccaacagagc gaggcaaaaa accaatgaat caaccgttac
     7801 tttcggtcaa taacctgacc cacctttacg cgccgggcaa aggctttagc gatgtctctt
     7861 ttgatttatg gccgggggaa gtgctgggca ttgtcgggga gtccggctcc ggaaagacca
     7921 cgctgctgaa atcaatctcc gcgcgcctga cgccgcagca gggggagatt cactatgaga
     7981 gccgttcgct gtacgcaatg agcgaggccg accgccgtcg cctgctgcgc accgaatggg
     8041 gcgtagtgca tcagcatccg ctcgacggcc tgcgccgcca ggtgtcggca ggcggcaata
     8101 tcggcgagcg gctgatggcg accggggcac gtcattacgg cgatattcgt gccaccgcgc
     8161 agaagtggct ggaagaggtg gaaattcccg ccaaccggat cgacgacctg ccgaccacct
     8221 tttccggcgg catgcagcaa cgtttgcaga tcgcccgcaa cctggtgacg catccgaagc
     8281 tggtgtttat ggacgagccg accggcggac tggatgtgtc ggtacaggca cgcctgctcg
     8341 acctgctgcg cggcctggtg gtggagctga acctcgcggt agtgattgtc acccacgatt
     8401 taggcgtcgc ccgcctgctg gcggaccgtt tgctggtgat gaagcagggg caagtggtgg
     8461 agagtgggtt aaccgaccgc gtgctcgacg acccgcacca tccgtataca caactgctgg
     8521 tgtcatcggt tttgcagaat tgagccggtg ccggatgcgg cgtaaacgcc ttatccggcc
     8581 tacaaatgcg ctccccgtag gtcggataag acgcgtcagc gtcgcatccg acacccgaac
     8641 cacgaggcga aaaatgatta acgtacaaaa cgtcagtaaa accttcatcc tgcatcagca
     8701 aaacggcgta cgcctgcccg tcttacaacg tgcctcgctc accgtcaacg caggcgaatg
     8761 cgtggtgctc cacggtcact ccggcagcgg caaatcaacc ctgctgcgct cgctgtacgc
     8821 caactatcta cccgacgaag gtcaaatcca gatcaaacac ggtgacgagt gggtagacct
     8881 ggtcaccgcg ccagcgcgca aagtggtgga aatccgcaaa accacagtcg gctgggtgag
     8941 ccagtttctg cgcgtcatcc cgcgtatctc agcactggaa gtggtgatgc agccgctgct
     9001 cgataccggc gttccgcgtg aagcctgcgc cgctaaagcc gcgcgtcttc tcacccgcct
     9061 gaacgtgccg gaacgcctgt ggcacctggc accatcgacc ttctccggcg gcgaacagca
     9121 gcgcgtcaac atcgcccgcg gctttatcgt cgactacccc attctgctgc tcgacgaacc
     9181 taccgcctcg ctggacgcca aaaacagcgc cgcggtggtg gaactgattc acgaagccaa
     9241 agcccgtggc gcagccatcg tcggcatctt ccatgacgaa gctgtacgta atgacgtcgc
     9301 cgaccgcctg cacccaatgg gagcctcttc atgattatca ataacgttaa gctggtgctg
     9361 gaaaacgagg tggtgcacgg ttcgctggag gtgcaggatg gcgaaatccg cgcctttgcc
     9421 gaaagccaga gccgcctgcc agaagcgatg gacggcgaag gtggctggct actacccggc
     9481 ctgattgagc tgcataccga caacctcgat aaattcttca ccccgcgccc gaaagtcgac
     9541 tggcccgccc attcggcgat gagcagccac gacgcgctga tggtggcaag cggcatcacc
     9601 accgtgctga acgcggtggc gattggcgac gtgcgcgacg gcggcgatca gctggagaat
     9661 ctggagaaga tgatcaacac catcgaagag acgcagaaac gcggcgtcaa ccgcgccgag
     9721 caccgtctgc acctgcgctg cgagctgccg catcacacca cactgccgct gtttgaaaaa
     9781 ctggttcagc gcgaaccggt gacgctggtg tcgctaatgg accactcacc gggccagcgc
     9841 cagttcgcta accgcgagaa gtatcgcgaa tattatcagg gcaaatactc cctcaccgat
     9901 gcgcagatgc agcagtacga agaagagcaa ttggcgctcg ccgcacgctg gtcgcagccg
     9961 aatcgcgaat ccatcgccgc cctgtgccgc gcgcgacaaa ttgcgctcgc cagccacgat
    10021 gacgccacgc acgcccacgt tgccgaatcc caccaacttg gcagcgtgat cgccgaattt
    10081 accaccacgt tcgaagcggc ggaagcctcg cgtaagcatg gcatgaacgt gctgatgggt
    10141 gcgccaaata tcgtgcgtgg cggctcgcac tccggcaatg tggcggccag tgaactggcg
    10201 cagcttggtc tgctggatat cctctcttcc gactactacc ccgccagcct gctggatgcg
    10261 gcgttccgcg tcgccgatga cgagagcaac cgctttacgc taccgcaggc ggtgaggctg
    10321 gtgaccaaaa atccggcgca ggcgctgaat cttcaggatc gcggggtgat tggcgagggt
    10381 aaacgcgctg acctggtgct ggcgcatcgc cagggcaatc acattcatat cgaccacgtc
    10441 tggcgtcagg gtaaaagggt gttctgatga tgggaaaact gatttggtta atggggccgt
    10501 ccggctccgg gaaagacagc ctgctggcgg aactccgcct gcgggaacaa acgcagttac
    10561 tggtggcgca tcgctacatc acgcgcgacg ccagcgccgg aagtgaaaac catatcgccc
    10621 tgagtgagcg ggagtttttt acccgcgcgg ggcaaaacct gctggcctta agctggcacg
    10681 ctaacggtct gtattatggc gtcggcatcg agattgacct ctggctgcac gctggattcg
    10741 acgtagtcgt caacggttca cgcgcgcatt tgccgcaggc acgggcgcgc tatcaatcgg
    10801 cgctgctgcc cgtctgttta caggtttcgc cggagatcct gcgccagcgc ctgaaaaacc
    10861 gtggccgtga aaacaccagt gaaattaacg cccggctggc gcgcgccgcc cgctatactc
    10921 cacaggattg ccatacgctc aacaatgacg gcagcctgcg ccagtcggtc gacacactgc
    10981 tgacgctgat tcatcagaag gagaaacacc atgcctgctt gtgagcttcg cccggccacg
    11041 cagtacgata ccgacgcggt ttacgcgctg atttgtgagc taaaacaggc ggagtttgac
    11101 caccacgcgt ttcgcgtggg ctttaacgcc aacctgcgcg acccgagcat gcgctacccg
    11161 agcatgcgct accatctggc gctgctggat ggcgaagttg tcggcatgat cggcctgcat
    11221 ttgcagtttc atctgcatca tgtcaactgg atcggcgaaa ttcaggaact ggtggtgatg
    11281 ccgcaggcgt gcggtctgaa cgtcagcagt aagttactgg cgtgggcaga agaagaagcc
    11341 cgccaggccg gggccgaaat gaccgaactt tccaccaacg tgaagcgcca cgacgcgcac
    11401 cgtttttacc tgcgtgaagg ctacgagcag agccacttcc gcttcaccaa ggcgctgtaa
    11461 catgagcctg accctcacgc tcaccggcac cggcggcgca cagggcgttc cggcatgggg
    11521 ctgcgagtgc gtagcctgcg ccagagcgcg gcgctcaccg cagtatcgcc gccagccatg
    11581 cagcggcgta gtgaagttta acgacgcaat caccctgatc gacgccgggc tgcacgatct
    11641 cgccgatcgc tggccgcccg gatcgttcca gcagtttttg ctgacgcact accatatgga
    11701 tcacgtgcag gggctattcc cgctgcgctg gggcgtgggc gatccgatcc cggtttacgg
    11761 cccgccggat gaacagggct gcgacgatct gtttaaacat ccgggcctgc ttgatttcag
    11821 ccacacggtg gaaccgtttg tggtgtttga tttgcagggg ttacaggtca cgcccctgcc
    11881 gctcaaccac tcaaaactga ccttcggtta tctgctggaa acggcacaca gccgggtggc
    11941 gtggctgtct gacaccgcag gcttgccgga aaaaacgctg aaatttttac gcaataatca
    12001 gccgcaggta atggtgattg attgcagcca cccgccgcgc gaggatgcgc cacgtagtca
    12061 ctgtgattta aacaccgtgc tggcgctgaa tcaggttatc cgctcgccac gggtgattct
    12121 gacccatatc agccaccagt ttgatgcgtg gctgatggaa aacgcactgc cgtcggggtt
    12181 tgaggcggga tttgatggga tggagattgg ggtggcgtga tgagagggaa tgtgcgcgct
    12241 ggccccctca ccctaaccct ctccccagag gggcgagggg accgattgtg ctcgatattg
    12301 aatattgcgc tggttttctc cctctcccca ttggggtgag gggcgatgcc tgctccatac
    12361 ccaacctcat cgcccatact catcttccat tctccgctct tcatcttcta gctgccgacg
    12421 ctcctgatca agctggcgct ggcgatcgtc cagctgcctg cggcgatctt caaactggcg
    12481 gcggcggtcg tcatattgtc tgcgccgatc gtcgctcact tcacgctgcc agccgtcgtc
    12541 gcgcgaatct tcatagtctc gcccacggtc agggttataa gcgtcgttaa tcgcctgctg
    12601 aatattgcca atggtgtcgt cgataatatc ggcctgggcc ggaacggtgg acagcgtgag
    12661 cagggtgaat aaaagaaata gcggaaagcg tttcattagc caacctcaaa aagaaactct
    12721 atccacatta atcattactc atccatgcaa gtagtggatg aatctcaatt tctccgctgc
    12781 tctattgccg taatcgcctc cacgcgttgt tgatgacgac cgccttcgta ctgtgcgccc
    12841 agccacgcat ccacaatcat ttttgccagt tcgaggccaa ccactcgtga accaaaagcc
    12901 agtgcaactt cactggcata atgcggataa tcagtgcgct ctgacgacct ggtgtcttta
    12961 tcaatcacct cactcattga ccatgaataa aaggctggca cagcaacgca gaatcctgcg
    13021 gtgccagcga catgaccgcc cattgctccg gtacgttttt taaaaagaaa caccggttgc
    13081 attgataaat tgtgctcagt atttgccgaa gtacaatata tataataaat atataaaaca
    13141 cctcatatta tttacagaga taataaattc gcgtaatttt ctctcttcag cacaaatgcc
    13201 taataaaatg gatcgttcag ctcacacttc cacttattaa agtcgcaaat tcccaattat
    13261 gataacccca gctttaaatg acgtattttg tatggattac atatttacga cataaatgat
    13321 aaatggagat ttatatgaat aactctcggt tattccgttt gagcagaatt gttattgcgt
    13381 taactgccgc cagcggcatg atggtaaata ccgctaacgc gaaagaggaa gcgaaagccg
    13441 ccactcaata tacccaacag gttaatcaga attacgccaa atcattaccg tttagcgatc
    13501 gtcaggattt tgacgacgct cagcgtggat ttatcgctcc gctgctggat gaaggtattc
    13561 tgcgcgatgc taatggcaaa ccatatta
//
LOCUS       DADKRT010000111        13584 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.112, whole genome shotgun sequence.
ACCESSION   DADKRT010000111 DADKRT010000000
VERSION     DADKRT010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13584
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.112"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(241..1614)
                     /gene="cobA"
                     /locus_tag="JQ356_002768"
     CDS             complement(241..1614)
                     /gene="cobA"
                     /locus_tag="JQ356_002768"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY4622800.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
                     FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDTLNQRVSEAAEARRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
                     LRGRVKQQFTTMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
                     VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
                     VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
                     GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
                     KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
                     LNWFSNH"
     gene            complement(1633..2439)
                     /gene="nirC"
                     /locus_tag="JQ356_002769"
     CDS             complement(1633..2439)
                     /gene="nirC"
                     /locus_tag="JQ356_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HAY4622801.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
                     AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
                     NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
                     LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKSNRPVADKFNQTETAAG"
     gene            complement(2566..2892)
                     /gene="nirD"
                     /locus_tag="JQ356_002770"
     CDS             complement(2566..2892)
                     /gene="nirD"
                     /locus_tag="JQ356_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HAY4622802.1"
                     /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
                     IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
                     VVQLRG"
     gene            complement(2889..5432)
                     /locus_tag="JQ356_002771"
     CDS             complement(2889..5432)
                     /locus_tag="JQ356_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HAY4622803.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
                     DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
                     AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
                     EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
                     YAIGECASWNNRIFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
                     DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
                     LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
                     AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
                     EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
                     VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
                     FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
                     RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
                     IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
                     NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
     gene            complement(5694..6875)
                     /gene="tsgA"
                     /locus_tag="JQ356_002772"
     CDS             complement(5694..6875)
                     /gene="tsgA"
                     /locus_tag="JQ356_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HAY4622804.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSTA
                     MFILGVVSGITMSIGTFLITQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
                     EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
                     LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
                     TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
                     H"
     gene            7146..7718
                     /gene="ppiA"
                     /locus_tag="JQ356_002773"
                     /gene_synonym="rotA"
     CDS             7146..7718
                     /gene="ppiA"
                     /locus_tag="JQ356_002773"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HAY4622805.1"
                     /translation="MFKSTLAAMAAVFALSALSPAAMAAKGAPHVLLTTSAGNIELEL
                     DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
     gene            7823..7990
                     /locus_tag="JQ356_002774"
     CDS             7823..7990
                     /locus_tag="JQ356_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HAY4622806.1"
                     /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
                     RLVELRRHYER"
     gene            7980..8582
                     /locus_tag="JQ356_002775"
     CDS             7980..8582
                     /locus_tag="JQ356_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HAY4622807.1"
                     /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA
                     ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLEKTKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
                     SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
     gene            8614..9177
                     /gene="pabA"
                     /locus_tag="JQ356_002776"
     CDS             8614..9177
                     /gene="pabA"
                     /locus_tag="JQ356_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HAY4622808.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
                     QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
                     KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPGSLPACFDVTAWSETREIMGIRHRQW
                     DLEGVQFHPESILSEQGHQLLANFLHL"
     gene            9263..10483
                     /gene="argD/dapC"
                     /locus_tag="JQ356_002777"
     CDS             9263..10483
                     /gene="argD/dapC"
                     /locus_tag="JQ356_002777"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     acetylornithine/succinyldiaminopimelate transaminase"
                     /protein_id="HAY4622809.1"
                     /translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
                     VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
                     VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTASTPEFLQGLRELCDQ
                     HQALLVFDEVQCGMGRTGDLFAYMYYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
                     HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
                     IRGMGLLIGAELKPHYKGRARDFLYAGAEVGVMVLNAGPDVMRLAPSLVVEDADIDEG
                     MQRFAHAVAKVVGA"
     gene            complement(10550..12640)
                     /locus_tag="JQ356_002778"
     CDS             complement(10550..12640)
                     /locus_tag="JQ356_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622810.1"
                     /translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
                     ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
                     ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
                     LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
                     AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
                     RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
                     YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
                     LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
                     LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
                     QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
                     AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
                     RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
                     HGIWLSRKLRDSKA"
     gene            complement(12691..13323)
                     /gene="crp"
                     /locus_tag="JQ356_002779"
     CDS             complement(12691..13323)
                     /gene="crp"
                     /locus_tag="JQ356_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HAY4622811.1"
                     /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
BASE COUNT         3288 a         3495 c         3557 g         3244 t
ORIGIN      
        1 tccctatgta ttatatatta attaatattc attgattata tgaatataag cagactgctc
       61 gttaagaacg atacaggaat atttaattgg cgtcagtgag cgaatgactt aattttgtaa
      121 gtcgctgtaa cggtgaatat aacccattag cagataatat ttattaaggg gttatgtttt
      181 atttgctgaa tatataaaaa gagtcattaa gaaggccaga attctctggc ccgggttaaa
      241 ttaatggttg gagaaccagt tcagtttatc gcgcaggcca acaacccgac caataataat
      301 tagcgatgga ctgttcattt gctgagcaag ttcaccgagt tgcgtgagcg taccgtcaat
      361 cacgcgctgc gtgactgccg ttccgttttc gacaattgcc accggcattt cgccaggcat
      421 accgtgttca atcagctttt gctgaatagt cgcggcctga ttcaacccca tatagaacac
      481 cagcgtctgt ttttctgccg ccaggttttc ccagtccagc tcgccaccgg tttttaagtg
      541 tccggtaatt aagcgtacgc tctgggcata atcgcgatgc gtgagtggaa tacccgaata
      601 ggcagagcaa ccagaagctg cggtaatacc cggaaccacc gagaacggaa tacccgcgtt
      661 gcacagtgtt tccagctctt cgccaccacg gccaaaaata aacggatcgc cacctttcag
      721 ccgcaccacg cgtttgcctt tttgcgcttc ccgcagcagg atctggttaa tctcttcctg
      781 cggtacacag tggtatcccg cgcgtttgcc gacgaaaacg cgatcagcat cgcggcgtac
      841 cagattcata atatcgtcag aaaccagacg gtcgtagacc accacatctg cctgctgaat
      901 ttgttgcagt cctttcagcg tcagcagccc ggcatcgccc ggacctgcac caaccagcac
      961 cacttcaccg cgatggtcga gcggttcgtt gattaactgt tcggtcgttt cagtaatggc
     1021 tttctgatcg ttgtttgcca gcgactgcgc caggcggtcg ttaacgaaca atttctccca
     1081 gaaacggcga cgctcactca tcgtggtgaa ctgttgtttc actcgcccgc gtaattgccc
     1141 ggcatatttc gccacctggc ccagatgcaa cggcagcagt gattcgagtt tttcgcgcaa
     1201 caggcgcgcc agaaccggag aggtgccgcc agaggagacc gctaccatta gcggtgagcg
     1261 gtcaataatc gacggcataa taaagctggc ggctttcggc gcatcgacta cgttacagaa
     1321 gatgcgacga gcttcagcgg cttcgctgac gcgctggtta agcgtgtcat catccgtcgc
     1381 tgcaatcgcc agccagcagg tgtcgagaag gctttcatca aatggccctt cgacgagggt
     1441 taacatgcct gcatctgccc atgcggtgaa ctgtggaata aacgctaatg cattcaccgt
     1501 taagcgagcg cctgcgtcta acagcaacct tgctttgcgt tccgcgacat caccaccgcc
     1561 gacaatcaga cagtcgcgat cgcgtaattg gcaaaatata ggcaaatgat ccacgtaaaa
     1621 accccttagt aattaaccgg cagccgtttc agtttgatta aatttgtccg caaccggacg
     1681 attcgatttc ggcgtagcat accaataacc caatcccatg aatacggcac ctgataaagt
     1741 attacccagc gtcacccaca gcaggttatg accaataccc gccagcgtgt aggcttcgct
     1801 gtggttgccg aaccaggaga gcgcgaacag cgtcatgtta gcgatagagt gctcgtagcc
     1861 ggacgcgata aatgccagca gacaccacca gatagcgata aatttcgccg ccccttcagt
     1921 gcgcagcgcc atccagattg ccaggcaaac cagccagtta cacaatgcac ctttgaagaa
     1981 gagtaccatt gccggtgcag tggttttagc cagcgcgacg gagtgaacga tgctggtatc
     2041 taccggcagc aggctaccgc cgccccagct atagagcatg gcaacgaaga cggaaccgac
     2101 caggttaccc agccaggttt gcggcaggat tgcccacatt tgcccgtggc tgatgctgcc
     2161 cgcttttacc ccaaaggtga ggaacatggt gtgtccggtg aacagttcag aaccggcgat
     2221 aatcaccagc gttaaggcga taccaaaggt cgcgcccatc accagcggac gtacggacgg
     2281 gtcgagcaaa ttaccgagcg tgaaaatcaa gatgatccca agacccacat acgcgcccgc
     2341 catggcggag ctgacccaaa agccgagcgg gttatttgcc gacaggcgtg caatgcgcgc
     2401 agcgttagcc gcacacttat taatagtgtc tgtaaacatt tgattatcct ttaaaaaata
     2461 aaaacaaaaa aataaaacaa aaagtttaaa aaatgtcctg caatataccg aaggtaatta
     2521 caggaccatg caaaaagggg aggcattgcg cctcccgtta aaacattaac cgcgcagctg
     2581 caccacgccg tctttcactc gtgcttcgta atgtttgacg gaaaactgtt cgtcttccat
     2641 gcacaagcca tcacttaagc gaaaacgctg ttttttcagc gggctggcga cccacagctc
     2701 gccctggtgt tccgcaatca gcccgcgtga cagcacgctg gactcgaaga acggatcgat
     2761 gttgctgatc gcaaacacct ggtcgctgtg atacgggcgg aaaatcgcga cctgctcgtc
     2821 gcctaacagc gcgcagacgc cggtttcagg caggatgtca tcgattttgc agatgtcttt
     2881 ccactggctc atgcgttgtc ctccaccaga gttaccggga tacgttcata cggcgttgcc
     2941 ggacggtgct gttcgcgctc tggcaccatc tgcacgttcg ggtcacgctt gtcgctgttg
     3001 atgaagtgtt tgaagcgagt ctgcgcggac ggtgtattga ccgtttcagt ccactcacac
     3061 actaccgctt cacgcaggcg cgccatctct tcttccagat gagcgttcag ccccagtttg
     3121 tcgtcaatga tcaccgcttt caggtaatcg atgccgcctt cgaggttttc taaccacggc
     3181 gcggtacgcg tcagtttgtc ggcggtacgg atgtagaaca tcatgaagcg gtcgagatat
     3241 ttgatcagcg tttcgcgatc gatatcagct gccagcagat ccgcatgacg cggtttcatg
     3301 ccgccgttgc cgcaaacata caggttccag cctttttcag tggcgataat acccacgtct
     3361 ttaccctgag cttctgaaca ttcacgggta cagccggaga caccgaactt cattttgtgc
     3421 ggcgtacgga tgcctttgta gcggttttcc agttccacgc cgaggccgac gctgtcgcca
     3481 acgccgtagc ggcaccaggt gctacccacg caggttttcg ccatacgcag tgctttcgca
     3541 taggcatgac cggtttcgaa gccggcttca atcagctgac gccagatctc tggcagatcg
     3601 tctttctgtg cgccaaacat cgccaggcgc tgggaaccgg tgattttggt gtagagatta
     3661 aattcacgcg cgatacgacc cactgccatc agcccttccg gggtgatttc accgcccgga
     3721 gaacgcggga tcaccgagta ggtcccgtct ttctggatgt tagcgaggaa gttgtcgtta
     3781 gaatcttgca gcggagtatg ttctggcttc agaatgtatt cgttccagca ggaggccagc
     3841 agcgaaccga cggtcggttt acaaacttca caaccgtagc ctttgccgtg tttcgccagc
     3901 agttcttcga aggttttaat gccttcaacg cggatcaaat ggaacagttc ctgacgcgaa
     3961 taagcaaagt gttcgcacag gttgttgtta acttcgatgc cctgtttcgc cagttccgcg
     4021 ttcagtacct gagtgaccag cgggatacag ccaccgcagc cagtacccgc tttggtttca
     4081 gctttcagcg ccgcaactgt gtggcagcct ttgttgatgg cagcaatcag atcaccttta
     4141 gtgacgtcga agcaggagca gatttgcgcg ctgtccggca gtttatcaac accgatagac
     4201 ggcttaccgc tacccgagtg cgccggcaga atcagagaat ccgggttttc cggcagctcg
     4261 atagcattca gcaccagttg cagcaagtta ccgtagtcgc tggtatcgcc caccagtacc
     4321 gcaccgagca gggttttgtt gtcttcgctg acgatcaggc gtttgtagat ctctttgctt
     4381 tcgtcgaggt aaacgtagct acgtgcgcca ggcgtgcgac catgagcatc accaataccg
     4441 cctacgtcca cgcccagcag tttcagcttg gcgctaaggt cagcaccttc aaaggcgttt
     4501 tcgctaccga gaatatggtc aacggcgacc tgcgccattt tgtagccagg tgctaccaga
     4561 ccaaatatac ggttgttcca gcttgcgcat tcaccgatag cgtagatatc cggatcggaa
     4621 gtttggcagg aatcattaat gacgataccc ccacgcggag caacgtccag accacactgg
     4681 gttgccagct tatcgcgcgg acggataccg gtagagaaga cgataaagtc gacttccagt
     4741 tcgctgccgt cggcaaaacg catggtttta cgtgcttcga caccttcctg cacaatctca
     4801 agggtgtttt tgctggtgtg aacgcgcacg cccatacttt cgattttgcg acgcagctgc
     4861 tcgccaccca tctgatcaag ctgttccgcc atcagcatag gggcaaattc gataacgtgg
     4921 gtttcaatac ctaagttttt cagcgcgcca gcggcttcca gacctaacag gccgccacca
     4981 acaacggcac cgcgtttgct gcgacgggcg caggattcaa tggcgttgag gtcttcaatg
     5041 gtgcgataga caaagcagtc ctgagtatca gaacctttga ttggtgggat ccacgggtag
     5101 gaaccggttg ccatgatcag cttgtcataa aaaacggtac gtccggcgct ggagtgaatc
     5161 accttctcct gacggttgat ggtgatagcg cgttcgccga ccagaacttt gatgccgtgt
     5221 ttctcgtaga agccttcgcg caccagcgac agctcttcgg cggtgtggtg agagaagtaa
     5281 gacgagaggt gtacgcggtc ataagcgatg cgcggttctt cacagaaaac ggtaatatca
     5341 aagttggccg catcagattt atcaagaaga tcttcgataa agcgatggcc gaccataccg
     5401 ttaccgataa ttgcgagtct gactttgctc atttttgcct cgatttcttt tctattaccg
     5461 cctaccttaa cgattcagca accccgctta ttgatgtaaa tcaaattcac ctttatatac
     5521 cccttaaggg gtatgttgct gatttgtata aattttctta agtcacggaa ttgtctgaca
     5581 tttcatgttt gtgcaaaaaa tagacaaaat gaacgggttt atagaaatag atgcacgtag
     5641 cggggttaga gaggaaaagg ccggacgacg atagtgccgt ccggcattag caattaatga
     5701 gaggtcaggg tgttatgctg acggtgacgg ctgacgaaac ctaacaggaa gcacatcaca
     5761 aagacgacag cgtacagacc gtttgctgta agcagtgccg cctgcggacc gctatgttca
     5821 acaatcgggc cggtaaccac aaaggtcaac atagtaccga tggttccgca ggtcaggaca
     5881 aagttaacca gttttggcga cggtactttg gtctgctgtg aacccagggt gatgatggtg
     5941 gtatagatcg cgctggagaa gaagcccaga gcgagaattg accacgccat atgtgctggt
     6001 gttccggtgt taaagacgta catcagaatc gcagccagac cagccagtac ggtcagaatg
     6061 cgttgcaaat caaagaagcg aagaataaag ctgaacgccc acatgccgac catgtatgac
     6121 atccagaagt tactcaccag cgtgcccgcg tcgttcaggc tcatgcccag gcctttggca
     6181 tactcaggca cccaggagat aaaacctaac tgaccgagga tgtagcacag cgccgcaaca
     6241 gagagaaaca gtacgccgat cccccacttt tctttctcta ccggagcatc cgtttttggt
     6301 gcatgtttgc ccagtgctgg gaactcacag ccgaaggtca gaataaaaat agcgacatac
     6361 accagcccga tgcaggcata aacccagtac cactcaatgc tgcgcgccag tagaaacgcg
     6421 gcgatcattg ggaaaatcat cccagccata ctgaagaagg agtcagtaaa taacaggcgg
     6481 gaaccgcgct gacgcccttc atacatttgt gttatcagga atgtaccaat cgacatagta
     6541 atgccgctga ccaccccgag aatgaacatc gccgtcgaga acagcgccag gctgtggctg
     6601 aacatcaaac cggcaaccgc cagcaccatc aggagaaagc caaaacgtaa ctgcgttttc
     6661 aacgggacga tttccatcag ccaggcgttg aggaagatag agattaaaat gccggcgttg
     6721 aggaaggtga aggtgttact catactggaa acaggcagat tgaaataatc ggcgatattt
     6781 cccatcacca tcccggtgac aataaccaac gcaccagtca gtgcgtagga gagaaagcta
     6841 atccatgtga gcttgatgcg attgctgtta gtcatgattg gcctgcgttc aaaaataaaa
     6901 tggcatagcg ggatatgccg cgagcgggtg attttaggtg attttgtgat ctgtttaaat
     6961 gttttattgc aatcggttgc taaattgcat tttaagaagt gatcttgatc acggaataaa
     7021 aagtgatcgt caggttacat atatttcaga tacgtaaaat taggtaaagg gatggccttg
     7081 ttcttgaagg ctatttagaa tctcttcact tgcttttttt ctgctctgtt tgttaaggaa
     7141 atctcatgtt caaatcgacc ctggcggcga tggctgctgt tttcgctctt tctgctcttt
     7201 ctcccgcagc aatggcagcg aaaggggccc cgcacgtatt gttgacaacc tcagctggta
     7261 acatcgaact ggagctggat aaacaaaaag cgccagtgtc tgtgcaaaac tttgtcgatt
     7321 atgtgaacag cggtttttat aacaacacta cctttcaccg cgtcattcct ggctttatga
     7381 ttcagggcgg cggtttcacc gagcagatgc agcagaaaaa accaaacccg ccaatcaaaa
     7441 atgaagccga taacggcctg cgcaacacgc gtggcaccat cgcgatggcg cgtaccgctg
     7501 acaaagatag cgccaccagc cagttcttta tcaacgttgc cgataacgcc ttccttgacc
     7561 atggtcagcg tgatttcggt tacgcggtat ttggtaaagt ggtgaaaggc atggacgtgg
     7621 ccgataagat ttcccaggtg ccgactcatg acgttggtcc gtaccagaat gtgccgtcaa
     7681 aaccggtagt tatcctttcc gctaaagtcc tgccgtaatg atttctcgcg cgggcaatct
     7741 tgcccgcgct tctgctctcc cggcgtaacc cggatttgcc gcttatactt gtggcaaatg
     7801 gacacgttca gggaggcatc aagtgaagaa actcaccgat aagcaaaagt cccgtctctg
     7861 ggagcttcag cgtaatcgta atttccaggc cagtcgccgt cttgaaggcg tcgagatgcc
     7921 tttagtcact cttactgccg cagaggcttt agcgcgcctt gtagagctga ggaggcacta
     7981 tgagcgataa attcggcgaa gggcgcgatc cgtatcttta tccaggcctt gatatcatgc
     8041 gtaaccggct gaacatccgc cagcaacaac ggctggaaca ggccgcttac gaaatgacgg
     8101 cgctgcgtgc tgcgaccatt gagcttggtc cgctggtgcg cggtttaccg catttgcgaa
     8161 ctatccatcg ccagctgtat caggatattt tcgactgggc agggcaactg cgtgaagttg
     8221 atatttatca gggcgatacg ccgttctgcc actttgctta tatagaaaaa gagggcaatg
     8281 ccctgatgca ggatctggag gaagaaggtt atctggttgg cctggagaaa acgaagttcg
     8341 tcgagcggct ggcgcattac tattgtgaaa tcaacgtgct gcatcccttc cgggtgggaa
     8401 gtggtctggc acagcggatc ttcttcgagc aactggcgat tcatgccgga tatcaactga
     8461 gctggcaggg tatcgaaaaa gaggcctgga atcaggcaaa tcagagtggg gcaatggggg
     8521 atctcaccgc actgcagatg atatttagca aagtggtaag cgaagccggg gaatctgagt
     8581 aaaatagcgc ggttctttcg taccggagcc gccatgatcc tgcttattga taactacgat
     8641 tcttttacct ggaacctcta ccagtacttt tgtgaactgg gggcggatgt gctggttaag
     8701 cgcaacgatg cgttgacgtt ggcggatatc gacgccctta aaccacaaaa aattgtcatc
     8761 tcacccggcc cctgtacgcc agatgaagcc gggatctccc ttgacgttat tcgccactat
     8821 gccgggcgct tgccgattct tggcgtctgc ctcggtcatc aggcaatggc gcaggcattt
     8881 ggcggtaaag ttgtgcgcgc cgcaaaggtc atgcacggca aaacctcgcc gattacacat
     8941 aacggtgagg gcgtatttcg ggggctggca aatccactta ccgtgacacg ctaccattcg
     9001 ctggtggtgg aacctggctc attaccagcg tgctttgacg tgacggcctg gagcgaaacc
     9061 cgcgagatta tggggattcg ccatcgccag tgggatctgg aaggtgtgca gttccatcca
     9121 gaaagtattc ttagcgaaca aggacatcaa ctgctggcta atttcctgca tctctgattt
     9181 ccgattgcca ttcagtgatt ttttatgcat attttgtgat tataatttca tatttattta
     9241 tgcgtaacag ggtgatcatg agatggcaat tgaacaaaca gcaattacac gcgcgacttt
     9301 cgatgaagtg atcctgccga tttatgctcc ggcagagttt attccggtaa aaggtcaggg
     9361 cagccgaatc tgggatcagc aaggcaagga gtatgtcgat ttcgcgggtg gcattgcagt
     9421 tacggcgttg ggccattgcc atcctgcgct ggtgaacgcg ttaaaaaccc agggcgaaac
     9481 tctgtggcat atcagtaacg ttttcaccaa tgaaccggcg ctgcgtcttg ggcgcaaact
     9541 gattgaggcg acgtttgccg aacgcgtggt gtttatgaac tccggcacgg aagctaacga
     9601 aaccgccttt aaactggcac gccattacgc ctgtgtgcgt catagcccgt tcaaaaccaa
     9661 aattattgcc ttccataacg cttttcatgg tcgctcgctg tttaccgttt cggtgggtgg
     9721 gcagccaaaa tattccgacg gctttgggcc gaaaccggca gacatcatcc acgttccctt
     9781 taacgatctc catgcagtga aagcggtgat ggatgatcac acctgtgcgg tggtggttga
     9841 gccgatccag ggcgagggcg gtgtgacggc atcgacgcca gagtttttgc agggcttgcg
     9901 cgagctgtgc gatcaacatc aggcattatt ggtgtttgat gaagtgcagt gcgggatggg
     9961 gcggactggc gatttgtttg cttacatgta ctacggtgtg acgccggata ttctgacttc
    10021 tgcgaaagcg ttaggcggcg gcttcccgat tagcgccatg ctgaccacgg cggaaattgc
    10081 ttctgcgttt catcctggtt ctcacggttc cacctacggc ggtaatcctc tggcctgtgc
    10141 agtagcgggc gcggcgtttg atatcatcaa tacccctgaa gtgctggaag gcattcaggc
    10201 gaaacgccag cgttttgttg accatttgca gaagatcgat cagcagtacg atgtgtttag
    10261 cgatattcgc ggtatggggc tgttaattgg cgcggagctg aaaccacact acaaaggtcg
    10321 ggcgcgtgat ttcctgtatg cgggtgcaga ggttggcgta atggtgctga atgccggacc
    10381 ggatgtgatg cgtttagcac cgtcgctggt ggtggaagat gcggatatcg atgaagggat
    10441 gcaacgtttc gcccacgcgg tggcgaaggt ggttggggcg taaataagac gcatcaggca
    10501 aaatatgtcg gatgcggcgt gaatgcctta tccgatggtt tagcctgtat tacgccttcg
    10561 aatcccgcaa cttgcgactc agccaaatcc cgtgatgcgg tcgctgacgc catgccatcg
    10621 acgaaatggt gtgcatggtg ttcagatgac caataacccg ctgtaaatgc tgctccagcg
    10681 tacctgccgc gccttcgtgc ggctgcatct ccggcgcatc catgatattg gcatcgccag
    10741 aactacccgg ttcgtcatac tccagtcgct gctgacaacg ctgaatggcg atttcacaag
    10801 actgtaaata ctcttgtgcc agttcaggtg gcaatgcccg gtgttcccgc gccagcgtgg
    10861 tcatggcatt aatatgctca acaataaact ggctgtgcgt tacccacagt ttcatatctg
    10921 ccagataatg gctgttaaac gccggttcct gcatcgcctg attcaatgag ttatacagag
    10981 tgttatgtgc ctgatttacc cgcattcgct gccaggccag tggcgtaggt tgcggatcct
    11041 cgctaagaat caagcgaatc gcttcctgat aggcttctaa agcgtcatgg gcgtttttac
    11101 gcaataaccc gctctgccac tgcggccaca gccagacagt accgccgaaa gcaattaaac
    11161 aaccaataat ggtatcgata agacgcggaa ggatgtattg ctcgccgttc aaccacaata
    11221 gttgcagggt atacactgcg gtaatagtaa aaccgaccgt cgcccagccg tagtttttgc
    11281 gcaatatcag gtagctggcg agggtggtaa tcagcatcaa cgtcagggtg taaccttcgg
    11341 gaattttaaa gtgcagcgcc acgcccgcaa tgattaaccc gaccacggtt cccacggagc
    11401 gattcacaat cctcagacgg gttgcgccat agccattttg tgtcaccagc aataccgtca
    11461 tcaggatcca gtacgacttc ggcagatgca gcgcggtgcc catcaggctg gcaacgctta
    11521 acatcacact gagtcgtccg gcattgcgta gcgccggaga ctttagtgac agataacttt
    11581 tcagcgcagg aagtaatggc attcgccgct gtttatcggc cagtaagtca cgggcataga
    11641 gcggtttttg ggtgcgcagc acgcgggcga tgcggctgaa atgccagtag cagaattgcc
    11701 caaccggatt atccggatgc tggcgggcga ttttttccag tgcgccaatt tgcttttcca
    11761 tcgtaaaacg cgttggcagg cgatggtaaa gaatgtcatc agccagcacg cgcaggcgag
    11821 cggcgacggt ttgcgcattc cagcggataa cttcttccgc atggctacgc tcgaccagct
    11881 tttgcacctc ttccggctga tgcaaactga ccgaaatatg ttcctgtaaa tccagcgcct
    11941 cctggaaaat acgcagcatc cgcttgtagt cagtattatt ttgcgcggaa agcatatgca
    12001 tttgctgata gcactgggta attagatcga ccgctttttg ctggcgcacc agcagcggcg
    12061 gcagcgcttt ttcagggtcg gtgtgctggg taagcaggct gtatttggct tcacaataat
    12121 ctgccagttc acggtacagc agacttagtg actcgcgcag cggttgttcg cgccagatcc
    12181 agaaccaaaa ccagttaaac aatccgtacc agagagtgcc caacgcatag atgagcaacg
    12241 gttcccagac cggcatgtat cccgccagac tgagggtaaa aatggctgcc agcagcgatg
    12301 cgggaagcaa ttttgcgtgc aatggcccca actcagcagt gacgccaagt accagcgtta
    12361 atccggtcag caaaaagggc aggggaacat cttttgccag tagcagctgt gtcagtaagc
    12421 tacaggtggc aaacagcgac gcaccaatga ttaagcgttt gaaaaaacgt ttatgaggcg
    12481 tatcaaggcc cgcaatattg caacaggcag gaacgagaga gaagagcaga ccgaatcgta
    12541 attcgccaag cattaaccca acggccacgg gcaaacatag caccagcgtt tgtcgaagtg
    12601 catagttgat atcggggtga taaatcagtc tgcgccacat cgggggaaac aaaatggcgc
    12661 gctaccaggt aacgcgccac tccgacggga ttaacgagtg ccgtaaacga cgatggtttt
    12721 accgtgtgcg gagatcaggt tctgatcttc aagcatcttc agaatgcgtc ccacggtttc
    12781 acgagaacag ccgacaatct gaccgatttc ctgacgggta attttgattt gcataccgtc
    12841 cgggtgagtc atagcgtctg gttgttttgc cagattcagc agagtctgtg caatgcggcc
    12901 cgtcacgtcg aggaacgcca ggttgcccac tttctctgaa gtgacttgca gacgacgcgc
    12961 catctgtgca gacagacgca tcagaatgtc cgggtttacc tgaatcaatt ggcgaaattt
    13021 tttgtacgaa atttcagcca cttcacaggc ggttttcgca cgtacccatg cgctacgttc
    13081 ctggccctct tcaaacaggc ccagttcgcc aataaaatca ccctgattca gataggagag
    13141 gatcatttct ttaccctctt cgtctttgat cagcactgcc acagagcctt taacgatgta
    13201 gtacagcgtt tccgcttttt caccctggtg aataagcgtg ctcttggatg ggtacttatg
    13261 aatgtggcaa tgagacaaga accattcgag agtcgggtct gtttgcggtt tgccaagcac
    13321 catgcgcggt tatcctctgt tataagcttt ctccagagcc agataacgcc gctgtctctg
    13381 gattgccgaa atatgcttcc cgctacctgg gaaggggcta tcaactgtac tgcacggtaa
    13441 tgtgacgtcc tttgcataca tgcagtacat caatgtatta ctgtagcatc ctgactgttt
    13501 tagcatagct ttcgctttgt gtctcctggt gtctcgcttc agcatgaccc aggtcgcctt
    13561 ccgttgcgcg atttggttag tacg
//
LOCUS       DADKRT010000112        13518 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.113, whole genome shotgun sequence.
ACCESSION   DADKRT010000112 DADKRT010000000
VERSION     DADKRT010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13518
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.113"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..184
                     /locus_tag="JQ356_002780"
     CDS             <1..184
                     /locus_tag="JQ356_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY4622812.1"
                     /translation="WSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQIELLN
                     RRLSESVPCMPHKKAG"
     gene            205..906
                     /gene="mlrA"
                     /locus_tag="JQ356_002781"
     CDS             205..906
                     /gene="mlrA"
                     /locus_tag="JQ356_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MlrA"
                     /protein_id="HAY4622813.1"
                     /translation="MGLPLIPVTLRAWQRRYGLLKPQRTDDGHRLFNDADIDRIREIK
                     RWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYP
                     AQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARRKQGKDALVVGW
                     NIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQL
                     TSWQEQGHDIFPLGI"
     gene            966..1073
                     /locus_tag="JQ356_002782"
     CDS             966..1073
                     /locus_tag="JQ356_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HAY4622814.1"
                     /translation="MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG"
     gene            complement(1054..1785)
                     /gene="yehW"
                     /locus_tag="JQ356_002783"
     CDS             complement(1054..1785)
                     /gene="yehW"
                     /locus_tag="JQ356_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehW"
                     /protein_id="HAY4622815.1"
                     /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE
                     SFAALALAHFWLVGISSLFVVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLR
                     KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
                     LVALAAIIADRLFERLVQALSQHAK"
     gene            complement(1790..2716)
                     /gene="yehX"
                     /locus_tag="JQ356_002784"
     CDS             complement(1790..2716)
                     /gene="yehX"
                     /locus_tag="JQ356_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter ATP binding
                     protein YehX"
                     /protein_id="HAY4622816.1"
                     /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
                     QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
                     PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
                     PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVCREERAEGEALAEEMTLRDALS
                     LFVARGCEVLPVVNTQGQPCGTLHFQDLLEEA"
     gene            complement(2709..3866)
                     /gene="yehY"
                     /locus_tag="JQ356_002785"
     CDS             complement(2709..3866)
                     /gene="yehY"
                     /locus_tag="JQ356_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehY"
                     /protein_id="HAY4622817.1"
                     /translation="MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL
                     WPQTIWMLVGVGCAWLTACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSA
                     LARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL
                     SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV
                     IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
                     GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG
                     AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND"
     gene            complement(3873..4790)
                     /gene="osmF"
                     /locus_tag="JQ356_002786"
     CDS             complement(3873..4790)
                     /gene="osmF"
                     /locus_tag="JQ356_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein OsmF"
                     /protein_id="HAY4622818.1"
                     /translation="MPLSKVWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNII
                     LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQ
                     QGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLKEGGTF
                     KLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQISGVNAAMA
                     YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTL
                     QQLNASIAVEGLDAKKVAADYLKQKGWTK"
     gene            complement(5042..7339)
                     /gene="bglX"
                     /locus_tag="JQ356_002787"
     CDS             complement(5042..7339)
                     /gene="bglX"
                     /locus_tag="JQ356_002787"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HAY4622819.1"
                     /translation="MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
                     KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS
                     GKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGSKESDPVDTNAESRLHRKEAREVAR
                     ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAV
                     GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDMVVAV
                     VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP
                     NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKRE
                     GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGTDSARVKKGEFELL"
     gene            7535..9250
                     /gene="dld"
                     /locus_tag="JQ356_002788"
     CDS             7535..9250
                     /gene="dld"
                     /locus_tag="JQ356_002788"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY4622820.1"
                     /translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPSSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTL
                     RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
                     DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
                     QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
                     DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
                     EVEDILALDIALQRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
                     ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
                     WQEVE"
     gene            complement(9289..10221)
                     /gene="pbpG"
                     /locus_tag="JQ356_002789"
     CDS             complement(9289..10221)
                     /gene="pbpG"
                     /locus_tag="JQ356_002789"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HAY4622821.1"
                     /translation="MPKFRVSLFSLALMLAVPLAPQAVAKTAAAITASQPEIASGSAM
                     IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
                     SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
                     FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH
                     LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
                     IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
     gene            complement(10395..10982)
                     /locus_tag="JQ356_002790"
     CDS             complement(10395..10982)
                     /locus_tag="JQ356_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014170891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HAY4622822.1"
                     /translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA
                     FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
                     LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
                     EGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF"
     gene            11152..11730
                     /locus_tag="JQ356_002791"
     CDS             11152..11730
                     /locus_tag="JQ356_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416640.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY4622823.1"
                     /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV
                     VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM
                     YGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
                     KHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA"
     gene            complement(11860..12621)
                     /locus_tag="JQ356_002792"
     CDS             complement(11860..12621)
                     /locus_tag="JQ356_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY4622824.1"
                     /translation="MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTA
                     REVVSHGVRAEIVQLDLGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFD
                     EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL
                     GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIA
                     SLVAWLCSEGANYTTGQSLIVDGGFMLANPQFNPE"
     gene            complement(12674..>13518)
                     /gene="mdtQ"
                     /locus_tag="JQ356_002793"
     CDS             complement(12674..>13518)
                     /gene="mdtQ"
                     /locus_tag="JQ356_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug resistance outer membrane protein
                     MdtQ"
                     /protein_id="HAY4622825.1"
                     /translation="AALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINASK
                     TRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRAD
                     LQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTL
                     PIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIE
                     RDTLRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGG
                     GYKR"
BASE COUNT         3241 a         3779 c         3410 g         3088 t
ORIGIN      
        1 ctggtcactt gccgcaggag ctaatcctag ttttatcgca agccagatgg gccacacaaa
       61 cgcacaaatg gtattcaatg tttacggagc atggatgaaa gacaacaatc acgaacagat
      121 agaacttctt aacagaagac tatctgaaag tgtcccatgc atgccccata agaaagcggg
      181 gtaaaataaa aacttgcaaa atcaattggt ttacctttaa tccctgtcac gttacgcgcg
      241 tggcagaggc gttacgggtt gctgaaaccg caacggacag acgacggtca tcgactgttc
      301 aacgatgccg atattgaccg gatccgcgag atcaaacgct ggatcgacaa cggcgtgcag
      361 gtcagcaaag ttaaaatgct gctcagtaat gaaaatgttg atgtgcagaa cggctggcgc
      421 gatcagcaag aaacattact gacctacctg caaagcggca atctgcatag cctgcgaacg
      481 tggatcaaag agcgcggtca ggattacccc gcccagacac tcaccacaca tctgtttatt
      541 cctctgcgcc gacggcttca gtgccaacaa ccgactctcc aggcgctgct ggcgatcctc
      601 gacggcgtac tgatcaacta catcgccatt tgtctggctt cggcacgtag aaaacagggt
      661 aaagatgcgc tggtggttgg ctggaatatt caggatacca cccgtctgtg gctggagggc
      721 tggattgcca gtcaacaagg atggcgcatt gatgtcctcg cccactcgct caatcaacta
      781 cgccctgaac tattcgaagg ccgtacattg ctggtgtggt gcggtgaaaa tcgaacctcc
      841 gcccaacagc agcaactcac cagttggcaa gaacaaggcc atgatatttt cccactcggc
      901 atttaatgat tcgttaacaa atgcgcttta ctgtacaatc ctttcgttaa cataaggagt
      961 gcaatatgcg catagctaaa attggggtca tcgccctgtt cctgtttatg gcgttaggcg
     1021 gaattggtgg cgtcatgctc gcaggttata cctttatttt gcgtgctggc taagcgcctg
     1081 caccagcctt tcaaacaggc ggtctgcaat gatcgccgcc agtgccacca gtaacgcccc
     1141 ctggatcaca tacgcggtat taaatccgct aagcccgatg atgatgggcg tacccagcgt
     1201 gctggcccct accgttgagg cgatcgtcgc cgtaccaatg ttgataatca ccgaagttcg
     1261 cacgcccgcc agaatcaccg gagccgccag cggtagctcg accttacgca gtcgctgacc
     1321 acgactcatt cccatacctt tcgcaacttc tgtcacgctg gcatcaatcg ctcccagccc
     1381 ggcaagtgtc gcctgcagga cgggcagcac accgtaaagg atcaaggcga taatcgctgg
     1441 ttgcagacca aagccgatca ccggaacggc aatcgccagc actgcgacag gcggaaaagt
     1501 ctgtccaacg gcggcaatag tttccaccag tgggcgaaat tccgcgcccc acgggcgagt
     1561 gacagcaatt ccggcaccag tgccaatgat caccacaaac aaactcgaaa ttcccaccag
     1621 ccagaaatga gccagtgcca gagctgcaaa actttcttgc tgataaacgg gtcgtggcag
     1681 ttgtgggaac aaggcagcaa acagcggctg gctgtaaggc agccagaaaa tcagtgccac
     1741 aaacaaagca atgagccaga acagcggatc gcgcaacatc ttcatacgct tacgcctcct
     1801 ccagcagatc ctgaaaatgc agcgtgccgc aaggctggcc ctgcgtgttc accaccggca
     1861 gcacctcgca tccccgcgcg acaaacaggg agagcgcatc gcgtagcgtc atctcttctg
     1921 ccagtgcctc accttctgcc cgttcttcgc gacacacgta atccgccaca ctacgtaacg
     1981 aaagcaggcg cacacccagt tcgctgcgcc caaaaaactg gcggacaaaa tcgtttgccg
     2041 gacgagtcag catcgtcagc ggattgccct gctgcaccac ttcaccgtga tccatcaata
     2101 ccagatgttc tgccagccgt agcgcctcat caatatcatg agtgaccagc acaatggtac
     2161 gccccagcaa acggtgaatg cgcgtcatct cttgttgcaa cgcgccgcgc gttaccgggt
     2221 ccagtgcgcc aaaaggttca tccatcagta agacttgcgg atcggcagcc agtgcgcgcg
     2281 ccactcccac acgttgctgc tgaccaccgg aaagctgatg cggataacgc tcacgtaaat
     2341 ttgactccag ccccagtagc gccattaatt cgtcgatacg atcgtcaatc cgcgcccgcg
     2401 accatttttg taattgcggc acggtagcga tgttttgcgc cacgctccag tgggggaaca
     2461 ggccaataga ttgaatagca tagcccatcc ggcggcgcaa ctccagtact ggcagcgagc
     2521 gaatttcttc tccggcaaag cggatcactc cgctgtcatg ctccaccagg cggttaatca
     2581 ttttcagggt ggtggatttg ccggagccag atgtgccaat cagcaccgaa aaactccctt
     2641 cctgaaaatt gagattgaga tcgttaacgg ctttttgtgc gccgaacagt ttgctgacat
     2701 ggctaaattc aatcattacg tttcaccttc agcagtgcga taagcaaatc gaacagcgcg
     2761 tcggtaagca ccgccagaac aattaccggg atcaccccca gcaacactaa atcaatggcg
     2821 ctgcttagca gcccctggaa aaccagcgca ccaaaaccgc ctgcgccgat taacgccgca
     2881 atcaccgcca tacctacagt ttgcaccatc accacccgca ggctgcgcag aaataccggt
     2941 aacgccagtg gtaactgaac atgcaggaat cgctgcgccc cgctcatgcc catcgctctg
     3001 gcactctcca gcacatcgcg cgggatctgg ttcaaaccga ctaccacgcc gcgcaccagc
     3061 ggcagcaagg catagagcac cagcgcaatc agtgcgggtg tcattccggt tcctgctatg
     3121 ccgagcttcc ccagccacgg aaaggccgtc accagcgcgg caagcggcgc aatcaacagg
     3181 ccaaagagcg ccaccgaagg cacggtctga atgacattga gcagagaaaa aattgccccc
     3241 tgccgagcag tggaaaagta gcaccagatg cccaacggca caccaatcac taacgcaggc
     3301 agcaccgcac caaacagcaa cgtcagatgt tgtgccagcg cgtcgtcaaa cacatcctga
     3361 cggttggcgt attctttcat tagtgagaga tcgttaagcg tgccggagta cagcaaccac
     3421 agcggaataa tggcaatctg catatgcaac aaccagcgcc acagcggatg cgtggagatt
     3481 cggcggatgg catcgctaca ggccagcaat gccagcgccg cagccagcca gaaaccactg
     3541 ccgaggctgg tacgcgccag cgcactgcca ttttgcgcca gttgtgtcgc cgcctttccc
     3601 gcgccccaca ccagcaatac gaagacgaat tgcgccagaa tgagtgcaca aatgctgcct
     3661 tttttaccgg gaataaaaca ggccgtcagc caggcgcaac caacgcccac cagcatccag
     3721 atcgtttgcg gccacagctg ccagagatga cgcccctcac ccgaaactaa acgattaggc
     3781 gcgtaactga taaacggcag cgccgctgcg attgccgtca gcaacagcag cagcgccaga
     3841 acaggattaa tacggaaata agtcacggga aattacttcg tccacccttt ttgtttcagg
     3901 tagtcggcag ccactttttt ggcatccagt ccttccacag caatgctggc attcagttgc
     3961 tgcaatgttt ttgcatcgag gctggcgaag actggctgta gccactgtgc catttgcgga
     4021 tactccttca acaccgactc acgcaccact ggtgcaggcg cgtagatagg ttgcacacct
     4081 tgcggatcgc ttaaggtttg cagccccagc gccgctaccg ggccgtcagt gccgtaagcc
     4141 attgcagcat taacgccaga gatttgctgg gcagcggctt tgatcgtcac cgccgtgtcg
     4201 ccaccagcca gtgacagcaa ctgatcctga ccgagcttaa agccataggc tttttcaaac
     4261 gcgggtaacg catcggcgcg ttcgataaac tctgccgagg ctgccagttt gaaggtgccg
     4321 ccctctttca gataacgact caggtcggca agcgaagtga gtttattttt ctctgccaca
     4381 tcctgacgca cggcgatagt ccaggtgtta tttgcaggcg cgggcgtcag ccagattaac
     4441 ttgttgtgct ccgaatcgag ctttttgact ttctcgtaac cttgctgcgc gtttttccac
     4501 gctgcatcgt tttcatcttt aaagaagaaa gcgccattgc cggtatattc cggatagata
     4561 tccagttcac cggaagtaat cgccccgcgc accacaggag tcgttccgag ttgcacttta
     4621 ttcaccgtcg gtacgccgtg gctttccagc acctgcaaga tgatgttgcc gagtagcgcg
     4681 ccttcggtat cgatttttga accgacttta acgggggaag ccgcctgtag cggcaggctc
     4741 acggctgcca acataaccag tgaacctgcc cagacctttg agagtggcat gatgctttcc
     4801 tcattctttt actgttgttt tcagcgaatt aagagaaaag catagttgat aatgacagag
     4861 ttagcctgag cggaaggatt cagttgcaga atcagataaa tacttaaagg gcatattttg
     4921 cccggcgttt cttgccggat gcggcgtaaa cgccttatcc ggcctacaaa ggtcgaaaat
     4981 tcagcaagtt aagatatgaa catcaggcaa agggcgcaaa cgtcgcgccc ttactaaagc
     5041 attacagcaa ctcaaactcg cctttcttaa cgcgtgcgga atcagtgccg ataaagacat
     5101 tgaacttgcc aggctcggcg tcatatttca tctgttgatt ccagaacttc agcgcctcga
     5161 tatcaatcgg gaagctgaca gtctgagttt cgcccggttt cagggtgatt ttctcaaagc
     5221 ctttcagctg cttcactgga cggctcatgg aagccgtcac atcctgcaag tacatctgta
     5281 ctaccgtggc cccttcgcgt ttaccggtgt tcgtcacctg cacgctggcc gtcactttgc
     5341 cgtcacgctt catggtcggc gcagaaagtt tcacatcaga gacggtgaaa gtggtatagc
     5401 tcagaccata gccgaacgga taaagcgccc cgttagcttc atcaaaataa cgcgaagtgt
     5461 atttgttcgg cttgtcggca ttatacggac gaccggtgtt cagatggctg tagtacaccg
     5521 ggatctgccc gacagaacgc gggaaggaca tcggcagctt gccggacggg ttgtaatcgc
     5581 caaacaacac atcggcaatt gcattaccgc cttcagtccc cgcaaaccag gtttccagaa
     5641 tcgcatcagc ctgctgatct tctttcacca gcgccagcgg acgcccgttc atcagcacca
     5701 gcaccagcgg tttaccggtg gctttcagcg ccgcaatcaa gtcacgttgg ctttgcggaa
     5761 tagtgatatc ggtacggctg gaggcctcgt gcgccatccc ctgtgcttca ccgaccacag
     5821 ccaccaccat atcagattgt ttcgccgtct gcaccgcttc atcaatcatc tcttgcggcg
     5881 agcgcggatc gactttgacc gcttcttcat actgattcag gaaatcgata atgcctttgt
     5941 cactggtaac gttcgcccct ttggcataca gcactttacc gttttcaccg acggcatttt
     6001 taatcccggt cagtacggtc acggattgat cggcaacacc ggctgcggac cagctgccca
     6061 tcacgtcgcg tttactgtcc gccagtggcc caaccaccgc aatggtggcc gattttttca
     6121 gcggtaacgt ttcgagacgg tttttcagca acaccaggct ttcgcgcgcc acttcacgtg
     6181 cttctttacg gtgcaggcgg ctttcggcat tggtatccac cgggtcagac tctttcgacc
     6241 ccaaatggct gtatgggtcg ttaaacaatc ccatatcata tttaacgttc agtacatggc
     6301 gggcagcatc gtccagctct tccatcgtca ctttgccgga tttgatcaac ccaggcagat
     6361 acttcgagta atactcgtcg ctcatactca tgttgattcc ggatttcagc gccacgcgca
     6421 ccgcatcttc cgggtctgcc gccgtgccat gtttaatcag ctctttgatt gcaccgtgat
     6481 cggaaacggt gatgccttta aagccccact ggtcgcgcag aacatctttc agcagccagg
     6541 aatcggaggt ggctggcgtg ccgttcagcg agttcagcgc caccatcacc gcgccgctgc
     6601 ctgcgtccag ccccgctttg tacggcggca tataatcatt aaacaggcgc tgcggactca
     6661 tatcgacggt gttgtactct ttaccgcctt ctaccgcgcc gtatgcggca aagtgtttga
     6721 cgctggtcat caccgagtag cgatctgccg ggcttttacc ctgcatcgct tccaccatgg
     6781 ttttacccat tgttgaggtg agatacgtat cttcgccaaa accttcggaa gcacgtcccc
     6841 agcgcggatc gcgcgagaca tcgaccatcg gtgcccaggt catattcagg ccatcatctg
     6901 ccgcttcata agcagagaca cgtccgaccg ttttcactgc atcgaggtta aaagacgagg
     6961 ccagaccgag gctaatcggg aacaccgtgc gctgaccgtg cagcacgtcg taagcaaaga
     7021 aaagaggaat tttcaggcgg cttaattcca tcacctgatc ctgcatggcg cggatatcct
     7081 gacgggttac ggtgttgaaa atcgccccaa cctgaccgtc tttgatcatc tcgcggatcg
     7141 cctctttcgg gttatccggg ccgacgctga ttaagcgcag ctgaccaatt ttctcatcaa
     7201 ctgtcatttt cttaagcaat tcggtgacga acgcatcccg cgcttcgggc gtgaatggat
     7261 ggttgccgaa taaatcatcc gccagtgctg gctgcagggc cagactcacc gcgattccta
     7321 ctgaacatag ccatttcata tggatttttc ttcctctgtt gcccgacgag gcagcgaaaa
     7381 tggtgcaaaa accgtagttt gccataagca tgatggagag agaaaaagaa tgctcagttt
     7441 attgtctgaa ttttcaaaat attcactcgc tgaattgtca tacaaggcgc tattctagtt
     7501 tgtgatattt tttcgccacc acaaggagtg gaaaatgtct tccatgacaa caactgataa
     7561 taaagccttt ttgaatgaac ttgcccgtct ggtcggtcat tcacacctgc tcaccgatcc
     7621 cgcaaaaacg gcccgctatc gcaagggctt ccgttctggt cagggcgacg cgctggctgt
     7681 cgttttccct agctcactac tggaattgtg gcgggtgctg aaagcctgtg tcaccgccga
     7741 caaaattatt ctgatgcagg ctgccaatac aggcctgacc gaaggatcga cgccaaacgg
     7801 taacgactat gatcgcgata tcgtgatcat cagcaccctg cgtctcgaca agctgcacgt
     7861 tcttggcaag ggcgaacagg tgctggccta tccgggcacc acgctctatt cgctggaaaa
     7921 agccctcaaa ccgctgggac gcgaaccgca ctcagtgatt ggatcatcgt gtataggcgc
     7981 atcggtcatc ggcggtattt gtaacaactc cggcggctca ctggtgcaac gtggcccggc
     8041 gtataccgaa atgtcgttat tcgcgcgtat aaatgaagac ggcaaactga cgctggtgaa
     8101 ccatctgggg attgatctgg gcgaaacgcc ggagcagatc cttagcaagc tggatgatga
     8161 tcgcatcaaa gatgacgatg tgcgtcacga tggtcgtcac gcccacgatt atgactatgt
     8221 ccaccgcgtt cgtgatattg aagccgacac gcccgcacgt tataacgccg atcctgatcg
     8281 gttatttgaa tcttctggtt gcgccgggaa gctggcggtc tttgcagtac gtctagatac
     8341 cttcgaagcg gaaaaaaatc agcaggtgtt ttatatcggc accaaccagc cggaagtgct
     8401 gaccgaaatc cgccgtcata ttctggctaa cttcgaaaat ctgccggttg ccggggaata
     8461 tatgcaccgg gatatctacg atattgcgga aaaatacggc aaagacacct tcctgatgat
     8521 tgataagtta ggcaccgaca agatgccgtt cttctttaat ctcaagggac gcaccgatgc
     8581 gatgctggag aaagtgaaat tcttccgtcc gcattttact gaccgtgcga tgcaaaaatt
     8641 cggtcacctg ttccccagcc atttaccgcc gcgcatgaaa aactggcgcg ataaatacga
     8701 gcatcatctg ctgttaaaaa tggcgggcga tggcgtcggt gaagccaaat cgtggctggt
     8761 agattatttc aaacaggccg aaggcgattt ctttgtctgt acgccggagg aaggcagcaa
     8821 agcgttttta caccgtttcg ccgctgcggg cgcagcaatt cgttatcagg cggtgcattc
     8881 cgatgaagtc gaagacattc tggcgttgga tatcgctctg cagcgtaacg acaccgagtg
     8941 gtatgagcat ttaccgccgg agatcgacag ccagctggtg cacaagctct attacggcca
     9001 ttttatgtgc tatgtcttcc atcaggatta catagtgaaa aaaggcgtgg atgtgcatgc
     9061 gttgaaagaa cagatgctgg aactgctaca gcagcgtggc gcgcaatacc ctgccgagca
     9121 taacgtcggt catttgtata aagcaccgga gacgttgcag aagttttatc gcgagaacga
     9181 tccgaccaac agtatgaatc cggggatcgg taaaaccagt aagcggaaaa actggcagga
     9241 agtggagtaa aaattacgga tggcatagta tcgccatccg tcattcactt aatcgttctg
     9301 tgccgtctgc cccgccgccg ccatttgggc ggctttttgt tttttatagc tcaacgctgc
     9361 tgctggaaca ggcatcactt taccggtttc aatccaggta cgcaggcggc tggcatcggc
     9421 aaaatgggta tatttgccaa acgcatccat cactaccagc gccaccggtt tattattgat
     9481 aaccgtacgc atcaccagac aatggcccgc cgcattggta aaaccggttt tggttaactg
     9541 aatattccag ttatcgcgat acaccagatg gttagtattg cggaacggca gcgtatacgt
     9601 cgggttagag aaggttgcca tatcttcccg agtagtactt aactgcccga tcaacggata
     9661 ttgtttgctg gcaatgagca gtttggttaa gtcacgggca gttgaaacgt tatgcaccga
     9721 caatccggta ggttcaacaa agcgcgtgtt gttcattccg agcgatttcg ctttcgcatt
     9781 cattgcctta ataaaggctt tgtaaccacc gggataatgg tgtgcaaggc ttgccgccgc
     9841 gcggttttct gaagacatca gcgccagcaa cagcatatct ttacggctga tttcgctatt
     9901 cagtcgtacg cgcgaataga cccctttcat ctccggcgtc tggctgatat ccacttttag
     9961 tttttcatcc agcggcagtc gtgcatccag cacaaccatc gcggtcatta atttgctgat
    10021 agacgcaatc ggacgcacca gatccgggtg gttcgagtag atcactttgt tggtattcag
    10081 atcaacaatc atcgcgctac cggaggcaat ttcaggttgt gaagcggtga tagcggctgc
    10141 cgttttcgca acggcctgcg gtgccaaagg cacagccagc atcagggcca ggctaaataa
    10201 agaaactcga aatttcggca tgatgagcat tcagatagtg gttcacgcgc acaggttgcg
    10261 caccgccgga gtaaggattt actgaggcta gcgacgccat cataacgagc aaaaagtgcg
    10321 atcgtcaaag gagaatcgtg aggaaatgct gcattgctga catttacgcc agcaatgcaa
    10381 cgtcaaagaa ctttctagaa caaacgataa ccgtagcccc atagtataac ggttagggcg
    10441 agcagcactt ccagtaccag cacgccaatc gccagcgtcg aactagagaa gctaaggcct
    10501 tcctctttgt tgatattcag gaagctcgga ataccaaggt aaagcaggta gccggtgtaa
    10561 aacagcgcca ccgtgccgac cagcgcacac aaccagacca gtggataaag cgccaccaaa
    10621 ccgcttaaaa acagcggagt tgcaacgtag cccgcgaaga ccatgcagtg cgcaagtgac
    10681 ggacgctgcg gataattacg cgccatccac cagatgaccc gccccattac cgcaacccca
    10741 gccagcataa cgccataaaa caggacagcc agcgccagtc cggtaaacca ggataacttc
    10801 aggatagtgc catcgccaaa attccagcca atctgtgtag tgccaatgaa ggcgcaaatc
    10861 accggaatcg ccgccatcag caaaacgtgg tgggtgtaat ggtgagaaat cgtttcgttt
    10921 tcgcgattaa tcacctgcat ttcacgatcg ggatgggaaa acagtcccca gacatggctc
    10981 ataccgcccc cttgttgtga gttcatgaac ctgacagttc aagtataagt cagcttgtga
    11041 ttattttttg ttcgctcatg taatttgcac cgtctgatgt acgtcctttt tcagcgtgaa
    11101 tgatttccag ggtgtatgct tacaggcaac caaagggaga cagactggcc tatggatctc
    11161 aatacactca tctcacaata tggttatgcc gcgctggtga tcggtagcct ggcggaaggt
    11221 gaaaccgtga ctttgctggg aggcgttgcg gcacatcagg ggctattaaa gttcccgctg
    11281 gtggtacttt ctgtggcgct tggcggcatg attggcgacc aggtgcttta tctgtgcggg
    11341 cggcggtttg gcggcaagct gttacgccgt ttctcgaaac atcaggataa aattgagcgg
    11401 gcgcagaaac ttatccaacg ccatccgtat ctgtttgtca ttggtacgcg ctttatgtat
    11461 ggctttcggg tgattggccc gacgctgatt ggtgccagcc agctgccgcc gaaaatcttt
    11521 ctgccgctga atattctcgg cgcatttgcc tgggcgttga tttttaccac tattggttac
    11581 gctggtggtc aggtgattgc gccgtggttg cacaatctcg accagcattt gaagcactgg
    11641 gtctggttga ttctggtcgt ggttctggtg gtgggcgtgc gctggtggct gaaacggcgc
    11701 gggaagaaaa agccggatca tcaggcgtaa aaccattgcc ctgggtaagg cgttcgcgcc
    11761 gcatccgaca tccggtgcac catgcctgat gcgacgcttg tgcgtcttat catgcctacc
    11821 aaaattttac ccattgaaat aaccacgcac ctcactgcgc tattctgggt tgaactgcgg
    11881 attcgccaac ataaagccgc catccactat caacgactgc ccggtggtgt aatttgcgcc
    11941 ctctgagcac agccacgcta ccaggctggc aatctcatgc gttgcgccaa aacgccgcag
    12001 aggaatcgaa ggctccgcgt cgggcttcac gtcgctgtca tccatgccat tcattggcgt
    12061 ggcgatcgcc ccaggcgcga ctgcgttcac caaaatctta tgcctgacca gctccagcgc
    12121 catcgctttg gttaacccac cgagcgcatg tttagcggct gtgtaggcgc tggcatccgg
    12181 cagcggcgta tgttcatgta ccgatgtaat gttgatgatg cgaccgccct gcccttgttt
    12241 caccatctgg cgggccgcaa tttgtgagca taaaaatgca ccatcgacat caacggtaaa
    12301 aatcttgcgc cactcatcga aagccatatc aagaaacggc gctttggtca ttgcgcccgc
    12361 attattcacc agcacatcaa tacgccccag ccgttgaatg agtttctcca gcgcctgcgc
    12421 accttctggc agtttaccga gatccagctg cacgatctcc gcacgtacgc cgtggctaac
    12481 tacctcacgc gcggtatctt ttgccccttc ttcatctgag tgccaggtaa tgccaatatc
    12541 aaacccttgc tgcgccagta ataacgcgca ctctttgccg atccccgaat cggaggcggt
    12601 aataatcgca acctgtgcca tcgagttctc cacttaacgc tgaataaacg ttaagtatag
    12661 aaggcgcata tcatcagcgt ttgtaacccc cgcccaacgc accagtgagt tgaatggagg
    12721 catccagcca ctgcccttgc aataacaggc cattggcccg ctcacgcagc gcggggattc
    12781 tggcttcgct gacgcgggaa ccagcaatga tgcccgcgtt aaagcgcgcc tgcgcaagac
    12841 ctaccacacg caaggtatcg cgctcaattt gcgcctgatg ctggtttttc tccgcaagtg
    12901 tctgaacctg actggctgcc cgcgccacgt cattcaccgc ttcaaccacc gctttgttgt
    12961 agctggcgat agacaagttg ctttcggctt ttgcgatatc gagattggcg ttaagacgac
    13021 cactatcgaa aatgggtagc gtcaggcctg ccgtaacgcc catttgctgc gcggaatgac
    13081 ggaacagatc gcttaagtgc aacgcatcct gttgcaggaa ggccatcagg ttgatgtcag
    13141 gataaaatgc cgcttttgcc gcatcaatgg tgcttagcga tgactcaacg taccagtgcg
    13201 ccgcctgcaa atctgcccgc cgggccagta aggagtaccc cagttcatca ggaagctggc
    13261 ttgccacttt cggcaacgcg accggtttaa gcttcaatga ctttgtctgg ttatttgtaa
    13321 gtgcgcttaa ccgtgcctca ataattttca ttttccccgc gacatcgttg agctgctgcc
    13381 gggttttgct ggcattaata tcggtttcca caccttcaac tgaagaagta atcccgttct
    13441 gatatagctg gcgatcggtc gcgataatgg tgttctgctc tttttctatt tgctgcaaga
    13501 ccgtgtttaa cgccgcct
//
LOCUS       DADKRT010000113        13480 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.114, whole genome shotgun sequence.
ACCESSION   DADKRT010000113 DADKRT010000000
VERSION     DADKRT010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13480
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.114"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(102..3323)
                     /gene="carB"
                     /locus_tag="JQ356_002794"
     CDS             complement(102..3323)
                     /gene="carB"
                     /locus_tag="JQ356_002794"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HAY4622826.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV
                     REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
                     ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
                     AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
                     YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
                     TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
                     GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
                     ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
                     RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK"
     gene            complement(3341..4489)
                     /locus_tag="JQ356_002795"
     CDS             complement(3341..4489)
                     /locus_tag="JQ356_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase small subunit"
                     /protein_id="HAY4622827.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
                     EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
                     VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK"
     gene            complement(4944..5765)
                     /gene="dapB"
                     /locus_tag="JQ356_002796"
     CDS             complement(4944..5765)
                     /gene="dapB"
                     /locus_tag="JQ356_002796"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HAY4622828.1"
                     /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
                     LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG
                     TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSRESHTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL"
     gene            complement(5932..6846)
                     /gene="rihC"
                     /locus_tag="JQ356_002797"
     CDS             complement(5932..6846)
                     /gene="rihC"
                     /locus_tag="JQ356_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HAY4622829.1"
                     /translation="MHLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
                     TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP
                     AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP
                     NAEFNIAADPEAAACVFRSGIEIVMSGLDVTNQAILTPDYLATLPELNRTGKMLHALF
                     SHYRSGSMQSGLRMHDLCAIAWLVRPELFTLKPCFVAVETQGEFTSGTTVVDIDGCLG
                     KPANVKVALDLDVKGFQQWVAEVLALAS"
     gene            complement(6912..7862)
                     /gene="ispH"
                     /locus_tag="JQ356_002798"
                     /gene_synonym="lytB"
     CDS             complement(6912..7862)
                     /gene="ispH"
                     /locus_tag="JQ356_002798"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HAY4622830.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
                     VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
                     NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
     gene            complement(7864..8313)
                     /gene="fkpB"
                     /locus_tag="JQ356_002799"
     CDS             complement(7864..8313)
                     /gene="fkpB"
                     /locus_tag="JQ356_002799"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY4622831.1"
                     /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
                     SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
     gene            complement(8382..8876)
                     /gene="lspA"
                     /locus_tag="JQ356_002800"
     CDS             complement(8382..8876)
                     /gene="lspA"
                     /locus_tag="JQ356_002800"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HAY4622832.1"
                     /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
                     SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR
                     AKKQ"
     gene            complement(8876..11692)
                     /gene="ileS"
                     /locus_tag="JQ356_002801"
     CDS             complement(8876..11692)
                     /gene="ileS"
                     /locus_tag="JQ356_002801"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HAY4622833.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
                     ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
                     QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
                     LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
                     WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH
                     RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
                     LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
                     VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
                     DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
                     ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALG
                     DELRFVLLTSGATVADYHDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV
                     AEHAEICGRCVSNVAGDGEKRKFA"
     gene            complement(11735..12676)
                     /gene="ribF"
                     /locus_tag="JQ356_002802"
     CDS             complement(11735..12676)
                     /gene="ribF"
                     /locus_tag="JQ356_002802"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HAY4622834.1"
                     /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
                     KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
                     TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
                     GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
                     SPVKGVYVVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
                     RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
     gene            complement(12684..12902)
                     /locus_tag="JQ356_002803"
     CDS             complement(12684..12902)
                     /locus_tag="JQ356_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 domain-containing protein"
                     /protein_id="HAY4622835.1"
                     /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGHFLPVICAMAMK
                     SHFFLISVLNRRLTLTAVQGILGRFSLF"
     gene            13005..13268
                     /gene="rpsT"
                     /locus_tag="JQ356_002804"
     CDS             13005..13268
                     /gene="rpsT"
                     /locus_tag="JQ356_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HAY4622836.1"
                     /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
BASE COUNT         3148 a         3806 c         3397 g         3129 t
ORIGIN      
        1 aaaagattta cttaatgggc aaaaaaaacg gtcctcatca gagaaccgta ttacttattc
       61 gatcaaatta gcggatgaaa aatatccgcc atgacacgct attatttgat ctgcgcgtgc
      121 atttcctgca ccgaaattac tttttcggtc gcgtcggcat tcagcgccat cgcggtagcg
      181 aaaccaccgt tcagggtggt gtcataatgc actttatatt gcagcgcact gcgacggatc
      241 acgcgggagt cttcaatcgc gcgacggcct gaagtggtgt tgatgatgta ggtatattcg
      301 ccattcttga tgcggtcctg aatgtgcgga cggccttcat gcaccttgtt caccagacgc
      361 ggattaatgc ccgcttcgcc cagcacaatc gccgtgccgt gggtcgcatc cagctcgaag
      421 ccctgtttca gcagttttgc cgccaggtcc accacgcgtt ctttatcgcc ttcgcgcacg
      481 gaaagcaacg cacgaccgtg tttcttcatg gtggagttgc tgcccagctg cgctttggca
      541 aacgcttcag cgaaggtgcg gcccacgccc atcacttccc cggtggagcg catttctggc
      601 cctaacagcg ggtcaacacc cgggaattta ttgaacggca gcaccacttc tttcaccgag
      661 tagtacggcg ggataacttc tttggttacg ccctgctcag ccagcgattt gccagccatc
      721 acacgcgccg ccacttttgc cagcggtacg ccggtggctt tggagacgaa cggaacggta
      781 cgcgccgcac gcgggttaac ttcaatcagg tagacttcgt tgtttttcac cgcaaactgc
      841 acgttcatca gaccgcgcac ctgcaattcg aaggccagtt tctgcacctg ctggcgcatc
      901 acatcctgaa tttcctgact taaggtgtag gctggcagag aacatgcgga gtcaccggag
      961 tgcacgcccg cctgctcgat gtgctccatg atgccgccaa tcagcaccat ttcgccgtcg
     1021 cagatggcat ccacgtcaac ttctaccgcg tcatcaagga agtgatccag caacactggc
     1081 gcatcgttag acacgctgac cgccgtctgg aagtagcgac gcaggtcagc ttcgtcatag
     1141 acgatttcca tcgcccgacc gccgagaacg taagacggac gtaccaccag cgggtagcca
     1201 atctctttcg ccttctctac cgccatttca atagcggtaa cggtggcgtt cgccggttgt
     1261 ttcagtttca gacgctcaac cgcatgctgg aagcgttcac ggtcttctgc acggtcgata
     1321 gcatccgggc tggtgccgat aaccggtacg ccagcagctt ccagcgcgcg cgccagtttc
     1381 agcggggtct gacctccgta ctgaacgata acgcctttcg gcttctcaat acgcacgatt
     1441 tccagcacat cttccagagt taccggctcg aagtagaggc gatcggaagt gtcgtagtcg
     1501 gtggagacgg tttccgggtt acagttaacc ataatggttt cgtaaccgtc ttcgcgcagc
     1561 gccagcgagg cgtgtacaca gcagtagtcg aattcgatac cctgaccgat acggttcggg
     1621 ccgccgccga gaaccatgat tttttcacgg tcggtagacg gattcgcttc gcactcttct
     1681 tcataagtgg agtacatgta agcggtgtcg gtggcgaact ctgccgcaca ggtatccacg
     1741 cgcttataaa ccgggtgcag gtcatactgg tcgcgcagct tgcggatttc cgcttcgcgc
     1801 acgcccgcca gttttgccag acgcgcatcg gcaaagcctt tgcgtttcag ctggcgcagg
     1861 aattcagcgt tcaggccagt gatgcccact tccgctactt tctcttccag acgcaccagt
     1921 tcttcaatct gtaccaggaa ccagcggtca atattggtca ggttgaacac gccgtccaca
     1981 gacaggcccg cacggaaggc atcggcgatg taccagatac gctctgcgcc agcatctttc
     2041 agttcgcgac ggattttggt taacgcttcc gggtcatcga ggctcacttt cgggtcgaat
     2101 ccagtcgcac cgacttccag gccgcgcagc gctttttgca gggattcctg ctgcgtgcga
     2161 ccaatcgcca tcacttcgcc aaccgatttc atctgagtgg tcagacggtc gttagcacca
     2221 gcgaattttt cgaagttgaa gcgaggaatt ttagtaacca catagtcgat ggacggctcg
     2281 aaggaggccg gagtacgtcc gccagtgatg tcgttcatca gttcgtcgag ggtgtaaccc
     2341 accgccagtt tcgccgccac tttagcaatc gggaaaccgg tcgctttcga cgccagcgcc
     2401 gaagaacggg acacgcgtgg gttcatttcg ataacaatca ggcgaccgtt tttcgggttc
     2461 accgcaaact ggacattgga accaccggtt tcaacaccga tttcacgcag caccgccatc
     2521 gaggcgttac gcatgatttg atattctttg tcggtcagcg tttgggctgg cgcgacagtg
     2581 atggagtcac cggtatggat gcccatcgca tcaaagtttt cgatagagca gacgatgatg
     2641 cagttgtcgt ttttatcacg caccacttcc atctcgtact ctttccagcc gatcagcgac
     2701 tcatcaatca gcagctcttt ggttggggag agatccagac cgcgggcgca aatttcttca
     2761 aactcttcgc ggttataagc gataccgccg ccgctaccgc ccatggtaaa ggatgggcga
     2821 ataatgcacg ggaagcccac gtcagcggca accgccagcg cttcttccat cgtgtgtgcg
     2881 ataccggaac gcgcggtttc cagaccaatt ttcttcatcg ctacgtcgaa acgacggcgg
     2941 tcttctgctt tatcaatcgc atcggcggtc gcaccaatca tagtcacgcc gaactcttcc
     3001 aacacgccct gacgctccag ctccagagcg cagttcagcg ccgtctgacc gcccatcgtt
     3061 ggcagcaccg cgtccgggcg ctctttttca ataatcttgc gtactacttc ccagtgaatc
     3121 ggctcgatgt aggtcgcatc ggccatttcc gggtcggtca tgatggtcgc cgggttggag
     3181 ttcaccagaa tgacgcggta accctcttcg cgcagggctt tacatgcttg cgcgccagag
     3241 tagtcaaact cacacgcctg accgataaca atcgggcccg cacccagaat caggatactt
     3301 tttatatctg tacgttttgg catggctctt ttactcctga ttacttagcg gttttacggt
     3361 actgctcaat taactcgata aagtggtcga acaacggcgc tgcgtcgtgt ggcccagggc
     3421 tggcttccgg gtgaccctgg aagctgaacg ccggtttatc agtgcgatga atgccctgta
     3481 acgtaccgtc gaacagggat ttatgcgtga cacgcaggtt tgcaggtaat gttgcttcat
     3541 ccaccgcaaa accgtggttc tgggcggtga tcatcaccac gtttttctcc acatctttaa
     3601 ccggatggtt gccgccgtgg tgaccaaatt tcattttgac agtcttcgca ccgctcgcca
     3661 gcgccagcag ctgatgaccg aggcagatgc cgaataccgg aatatcggtt tcgaggaatt
     3721 tctggatggc ggtaatggcg taatcgcacg gggccgggtc gccaggaccg ttggagagga
     3781 agatgccgtc tggattcatt ttcagcacat cttccgcaga agtttgcgcc ggaacgatgg
     3841 tcaggcgaca gcctctatcc accagcatcc gcaggatgtt gcgcttggca ccaaaatcat
     3901 aagccacgac gtggaacggc agctcgtctt cttttttcgc ttctggcagg ccgccggtca
     3961 acgtccagct cccttgtgtc cagctatagg cttctgcggt ggtcacttct tttgccagat
     4021 ccatgccatt cagacctggg aacgcgcggg ctttttctaa cgccaacgcc gcatccgggt
     4081 tatcgcctgc gataatgcag ccattctgtg cgcctttctc gcgcagtaaa cgcgtcagct
     4141 tacgggtatc gatatcggca atcgccacga tgttatggcg cttcaggtaa gaagagaggt
     4201 cttcggtatt acggaagttg ctggcaatca gcggcaggtc gcgaatcacc agaccttgtg
     4261 catgtacctg agaagattct tcatcggcgt cattagtgcc gacattgcca atatggggat
     4321 aagtaagagt aacgatttga cgagaatagg aaggatcagt gaggatttct tgataaccgg
     4381 tcattgaagt attgaaaacg acttccccaa ccgccgaacc tgttgcccct atggcccgac
     4441 cgtgaaactg ggttccgtct tccagaacca atagcgctga cttaatcaaa acaccctcca
     4501 gagaatattc actcacttta tttgcatatt aattcacaat gatgacgtaa atcaatgcaa
     4561 atctgcttac cgacgaattt ctggcaaacg gcggcattct ggagatatgg gcgctaaaag
     4621 tcaacttaat ggcgggattt tttatattat tttgtggctc atgcatgttt tacaggcatt
     4681 aagcgacaaa aagatcatat aacctgttct ggaaaacgct tgcacagcaa gaagattgca
     4741 tgaaataaaa gcgagcaggg aaaagtggac caaatggtca aattttacat taaaacaaca
     4801 aaaacagaag acaaaacatg taatttttgg cacttataga caatttaaaa acataacact
     4861 aaaaataaaa gggccaaaat taaagccctt tataatcaat aaattaaatg tgttattttt
     4921 gcaccataac aaatattttg tggttataaa ctattgagat caagcacatc tcgcatatca
     4981 aaaagaccac tttccttacc actcaaccac aaagccgatc ttaccgcgcc gttagcaaat
     5041 gtcatgcggc tggacgcctt atgggtgatc tccagacgct cgccaatatc ggcaaacatc
     5101 gcggtatgtt cgccaacgat gtcacctgca cgcacggtgg caaaaccaat ggtgccaggc
     5161 acacgttcac cggtgtggct ttcacgactg tagaccgcgc aatctttcag atctttatca
     5221 agggcgtggg cgatcgcctc tcccattgcc agtgcggtgc ctgacggcgc atcaacttta
     5281 tgtctatgat gtgcttcaat aatttcgata tcggtgtagt cacccatcac tttggctgct
     5341 ttctccagca gcttaagcat gacgttaacg ccaacgctaa aattggcggc aaagacaatc
     5401 gcaatatcgg cggcagcgtc acgaatcgcc tgtttaccgg cttcgtcaaa ccccgtagtg
     5461 ccgatcacca tccctttgcc atgctggcga caaaaagcga gatggttcag cgtaccttcc
     5521 ggacgggtaa aatctataaa cacatcaaaa tcatctttta ccgcatcgag gctgctttgc
     5581 acggtaacgc ctgttttccc tgcaccagcc agctcaccgg cgtcgctgcc cagtaaagaa
     5641 gatccttcgc gctccagcgc cgcgcccagc tgcacgcctt ctaatgccag cgccgcctga
     5701 atcaactggc ggcccatacg ccccccggct cccgcgatgg caacgcggat gtttgcatca
     5761 tgcatagcta ttctcttttg ttaatttgca tagaccgttt tcagagtaac cagcgcatcg
     5821 ctacgccgcc agccaaaaac gctgataatt agaaattaat gataaacagg gagggatatc
     5881 agtgaaaggc atgagtcgat gaatgactgc atgccgataa catgtgacag gttacgacgc
     5941 cagagccagc acctcagcca cccactgctg gaagcctttc acatccagat ccaatgccac
     6001 ctttacattg gctggtttgc ccaggcaacc gtcgatatca accaccgtcg tgcctgaggt
     6061 aaattcgccc tgagtttcca ctgccacaaa acacggtttg agagtgaaca attccgggcg
     6121 caccagccag gcaatagcgc aaagatcgtg catacgcagt ccactttgca tactgccgct
     6181 acggtagtgg ctaaacaggg cgtggagcat ttttccggtg cgattcaact ccggcaaagt
     6241 agcgagatag tcaggggtta atattgcctg attggtgaca tccagaccgc tcatgacgat
     6301 ttcgatgccg ctacggaaga cacaggcagc cgcttctgga tcggcagcga tattaaactc
     6361 ggcgtttggt gtgcagttgc cgcgaccagc agaaccgccc atgatcacca gacgacgaat
     6421 atacggttta cattccgggc attgtgaaag taacagcgca atattggtta acgggccgat
     6481 ggccaccagg gtaacgggct ctggtgcacg catcagggca tcccgaatcg ccagaaacgc
     6541 tggtatcccg agcggctttc ggttgtgctc aacaaagtcg tagccagcca ttcccgattc
     6601 gccgtgcaca gatgccgcat cacgcggtgc gcgtaccagc ggcacagcgg ctccctgggc
     6661 gagcggaatc tccgcattcc agaaatgcag cagttgcagg gcgttgcggg tggttttctc
     6721 aaccgagaca ttacccgcga cggtggtcat cagttgcagg tcgagttcgg gtgcaaaaat
     6781 cgcggcggca atggcgacgg catcgtcaat gccggggtca gtatcgagga agataggtaa
     6841 atgcatgttt tctccataaa aaatgccggt aacaagaccg gcattttcgc ataacttagg
     6901 ctgctaatga cttaatcgac ttcacgaata tcgacacgca gctctttcgg cacttcgaaa
     6961 acaatgtttt cttcacggcc ttccagcgga atggcttcac caccgcccag ctgctgcaaa
     7021 cgtgccacca cattctgcac cagaatatcc ggagccgatg cgcccgcagt cacgccgacg
     7081 catttaacct ctttcaccca ctcttcctgg atgtctttcg catcgtcaat caaaaacgcg
     7141 cgtttgccca tacgctgggc cagctccgcc agacggttgg agttggagga gtttttcgaa
     7201 ccgaccacca acacaacttc cgcctgttct gccagggcgc gtaccgcttc ctgacggtta
     7261 gtcgtggcgt agcagatgtc atctttgcgc ggaccgacaa ttttcgggaa gcgtttacgc
     7321 agcgcgtcga tcacatcaga cgtgtcatcc accgacagcg tggtctgggt cataaaggag
     7381 agcttctctt cgtttttgac cgtcagtttc cacacatcgt ccggcgattc gaccagatac
     7441 attccccctt ccgggttact gtactggccc attgtccctt ccacttccgg gtgcccggcg
     7501 tgaccgatga gaatagattc ttcgccacgg cgactggcgc gggcgacttc catatgcact
     7561 ttggtcacca gcggacaggt cgcgtcaaat accgtcaaat cgcgactttt tgcttcgtta
     7621 cgtaccgcct gagaaacacc gtgtgcggag aaaatcagga tcgcgccgtc cggtacttcg
     7681 ctaatctgct caataaagat agccccacgc tcacgcaagc tatcgaccac atagcggtta
     7741 tgtaccactt cgtgacggac atatatcggt gcgccgtaaa tggccagcgc gttttcaaca
     7801 atgctgatag cgcggtctac cccggcacaa aaaccacgcg ggttggccaa caggatctgc
     7861 atgttacgcc tccaatgccg gatcgatttc cagcacttca atatcaaaat gaacggtctg
     7921 cccggccaga ggatggttga aatcaacggt aatggagtcg ccgttaattt cgcggatcac
     7981 gccaggcatc tcactgccat ccattgcggt aaaaagcatg attgcgccaa tttctggctc
     8041 gcctgcatcc ataaattcac ggcgggagaa gtactgaatc aggtccggtg acggcacgcc
     8101 aaacgccgca tctggctcca acgagaaggt ggttttatcg cccactttca gccccaacag
     8161 gtgttgctcc agcccttcag aaagagaagc atcacccagg cggaacagcg ccggtttacc
     8221 gttgttgcgg gtagactcgg cggtggtgcc atcgtcgagt tttagcgtga agtgcaccag
     8281 gacggcgcta ttgctctgta cagattcaga catgcaggtt tgctcttata tttgaggatt
     8341 tttgccggat gcggcgtaaa cgccttatcc ggcagggttt attattgttt tttcgctcta
     8401 gaaggcaaaa aaccttccag cacaatcagt gccgcaccga cacagatggc agtatcggca
     8461 aggttgaagg tggcgaagtg ccagtcgccg acgtagaagt cgatcatatc gacaacgaag
     8521 ccgtgccaca ggcggtcgaa caggttgccc agcgcgccgc caataatcag cgcgtaagcg
     8581 atattgttta gcttctgcgt ggccttcgag cgatacatca tcactgccag gatcacgcta
     8641 ataccaatcg caataccggc aaagaaccaa cgctgccagc cgccgctatc ggcaaggaaa
     8701 ctaaacgccg cgccatagtt acgcgcataa tgcagattaa gcgacgggaa cagcgggacc
     8761 gtatccccca gagcaaagtt ctggaggatc aggtatttgc tgcccagatc gataatcagc
     8821 acgactacca ccagccacag ccagcgtagc cctgttgaac agatcgattg actcatcagg
     8881 caaacttacg tttttcaccg tcaccggcga cgttgctgac acagcggccg cagatttctg
     8941 cgtgttccgc caccttgccg acatcctggg tgtagtgcca gcagcgtggg cacttctcac
     9001 cttcggcttt actcaacgcg actttcagcc ctttgagtac ttcgctctgc tgagcatcag
     9061 caggtgcgtc gtgatagtct gcaacggtag cgccggaggt caacaggaca aatcgtaatt
     9121 catcgcccag cgcggtcagt ttcgccgcca gttccggttc tgcatacaag gttactgccg
     9181 cttccagcga gccacccact ttcttgtcgg cacgcgcttg ctcaatgact ttgttcactt
     9241 cgccacgcac tttcaacagc tcgtcccaga acgcatcgtt catcgcttcg ctgtctgcca
     9301 ggccaaacag gccttcgtac cactcaccgg tgaagacgta tttttcacgt tcgcccggca
     9361 ggtagcccca cacttcatca gcggtgaagg agaggattgg tgccatccag cgcaccagcg
     9421 cttctgcgat gtgatacagc gcagtctggc agctacgacg cgccacactg tccgctttgg
     9481 cggtgtactg acggtctttg atgatgtcga ggtagaagga acccatctca acggagcaga
     9541 agcgcatcag acgctgtacc acttcgtgga aatcgtatgc ttcgtacgcc ttgaggatgt
     9601 cttcctgtgc cgctttcgca caacctacgg cccagcgatc cagtaccacc atctcttccg
     9661 gtttcaccat atcttttgct ggatcaaaac cgttcaggtt tgccagcagg aagcgcgcgg
     9721 tgttacggat acgacgatag ctatcggcag cacgtttcag gatctcgtca gaaacggcca
     9781 tttcaccggt gtagtcggtt gatgccaccc acagacgcag aatatccgcg cccagtttgt
     9841 tcatcacatc ctgcggcgaa acggtattgc cgatggattt agacatcttg cggccctgac
     9901 catccacggt aaagccgtgg gtcagtacct gacgatacgg cgctttgcct ttcatcgcgg
     9961 tggagatcat tagggaagac atgaaccaac cacggtgctg gtcagaacct tccagataca
    10021 tgtccgctgc gtgaccggca aattccggac gcacgtcaac aacagaagag tgggtagatc
    10081 cggagtcaaa ccatacatcc aatgtgtccg gcactttcac gtactgatca gcttcatcgc
    10141 cgaggatctc tttcgcatca agatcccacc acgcctggat gccgtcaact tcaacgcgtt
    10201 ttgccacttc ttccattagt tcgagagtac gcggatgcag ctcttccgtg tctttgtgca
    10261 cgaacagtga catcggtacg ccccaggtgc gctgacggga gatacaccag tcaggacggt
    10321 tagcaaccat cgactcgata cgcgcctggc cccagtccgg gatccactgc acgcctttga
    10381 tctctttcag tgactgcgca cgcagacctt tctgatccat gctgacgaac cactgcggcg
    10441 tcgcgcggaa gatgatcggc gttttgtgac gccagcagca cggatagctg tgctgcattt
    10501 tctcaacgtg cagcagcgcg cctttttcct gcagcagcgc aacgacgatg tcgttcgctt
    10561 tgaagacgtt cacgccatcc agcgtcggat aagtgcccgg cagataagtg ccgtccgggc
    10621 caaccgggtt agcggtttcc aggccgtatt tctgaccgat cacatagtcg tccgggccgt
    10681 ggccaggcgc ggtgtgaacg gcaccggtac cggcatccag ggtaacgtga tcgccgagga
    10741 ttgccggaac gtcgaagccc ataaacggat gggtaaagcg cagcaactca agctccgcac
    10801 cttttaccgt gccgagaatg gtgtaatcgg tcacgccgat acgctgcatt acgctttcaa
    10861 ccagatcttt cgccagaatc acggcctgac cgtcgatctg caccagcgca tagtcgaaat
    10921 caggtgcaat agagattgcg cggttcgcag gcagagtcca cggcgtagtg gtccagatca
    10981 ccagcgagat tgggccgtta acgttgctta cggcaaattt tgctttcagt gcatcctgat
    11041 cgaccgcctg aaaagcaacg tcgatggacg gagaagtttt gtcgtaatac tcaacttccg
    11101 cttccgccag cgcagaacgg cagtcaacgc accagtgtac cggcttcgcg cctttgtgca
    11161 ggtgaccgtt gccgatgatt ttgcccagcg cgcggatgat gttggcttca gttttgaagt
    11221 ccatggtcag gtacgggtgc gaccagtcgc ccagcacgcc cagacggata aagtctttgc
    11281 gttgaccgtc aacctgggtc gccgcgtatt cgcggcactt ggcgcggaac tcggcggcgg
    11341 tgaatttctc acccggctta ccgtattctt gctctacttt cagctcgatc ggcagaccgt
    11401 ggcagtccca gccaggcaca tacggcgagt cataaccgga aagccctttg gacttcacga
    11461 taatgtcttt cagaatcttg ttaaccgagt gaccaatatg aatgctgcca ttcgcataag
    11521 gagggccatc atgcagaatg aaggtttttt tgcctttttt agccgcacgg atgatgccgt
    11581 acagatcatc atcagtccaa cgcgccagca ttcccggttc gcgcttggcg agatcgccac
    11641 gcatcgggaa ccctgtttcc ggcaaattca gggttgattt atagtcactc atcagattct
    11701 cggttccgtg tttcggtttg attacataac aggcttaagc cggttttgtt agcccaaaaa
    11761 attcgcgggc ggttaattca tcacgcgcaa tctgcgcttt cagttcgtcc agcgacgcaa
    11821 atcgctgctc attgcgtatt tttttacgca gcactacttg tatatggcga ccgtaaaggt
    11881 ccattgcaac atctaacaaa tgcacttcca gctgctggcg aataccggca accgttgggc
    11941 gtgttccgat gtttgccacg ccgggtaacg gcttttcacc gaggcccagc acttctacca
    12001 cataaacccc tttcaccggg gaaacctgac ggcgtagcgg tacattcgcc gtcgggaaac
    12061 ctatagtgcg ccctaattca tcaccgtgga ctacacgccc ggagatggca aacgggtgcc
    12121 ccagtaaact ttctgccaga gccagattgt catccgccag cgcctgacgc acagcggtgc
    12181 tgctaatacg cacgccacct tcgcaaaaag tttgcgtact agtgatatcg aagccgtatt
    12241 ccatgccagc tttctgtaat aacaagaaat cgccttcacg accagcgcca aagcggaaat
    12301 catcccctac ggcaagaaat tttacgcgca aatgcttcac cagaagatcg ctgatgaaat
    12361 tttgcgcggt taacgccgcg aaacgcctgt cgaaacgcac gcacagcacg taatcaacgc
    12421 cacactctgc aaggtaacgc agtttttccc gcagccgggt cagtcttgcc ggggctttat
    12481 cggtagcaaa cagttccagt ggttgaggtt caaaaagcat caccatcacc ggtaagttgc
    12541 gcttgcgccc ttcttcctgc aagccctgta acagcgcgcg atgaccgcga tgcacgccgt
    12601 cgaaattacc aatagtcagc acacaccctt cttgcggggc ctggctgaga ttatgtatgc
    12661 cgcgtatcag cttcatgtct ggctcaaaac agtgaaaatc gtccgagtat accttgtaca
    12721 gcggtcaagg ttaaccggcg attgagtacc gaaatcagaa agaagtggct tttcattgcc
    12781 atggcgcaaa tcacgggaag aaagtgaccg cctgctgcaa tttttatcgc ggaaaagctg
    12841 tattcacacc ccgcaagctg gtagaatcct gcgccatcac tacgtaacga gtgccggcac
    12901 attaacggcg cttatttgca caaatccatt gacaaaagaa ggctaaaagg gcatattcct
    12961 cggcctttga attgtccata tagaacacat ttgggagttg gaccttggct aatatcaaat
    13021 cagctaagaa gcgcgccatt cagtctgaaa aggctcgtaa gcacaacgca agccgtcgct
    13081 ctatgatgcg tactttcatc aagaaagtat acgcagctat cgaagctggc gacaaagctg
    13141 ctgcacagaa agcatttaac gaaatgcaac cgatcgtgga ccgtcaggct gctaaaggtc
    13201 tgatccacaa aaacaaagct gcacgtcata aggctaacct gactgcacag atcaacaaac
    13261 tggcttaatc gccaatttgc tgaagctttg tgaaaaagcc cgcgcaagcg ggttttttta
    13321 tgcctgctgc ttttatgatg cgtgagagaa cacactaccg gttgccagat agtcaaaaga
    13381 tgctggcttt tgcagacacg ccgttacact ttctgaactc ttcgtggctt aagaatcgta
    13441 gaaccatcgg ctgatacatt ctgaacaaga atatctactc
//
LOCUS       DADKRT010000114        13446 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.115, whole genome shotgun sequence.
ACCESSION   DADKRT010000114 DADKRT010000000
VERSION     DADKRT010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13446
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.115"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            127..942
                     /locus_tag="JQ356_002805"
     CDS             127..942
                     /locus_tag="JQ356_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HAY4622837.1"
                     /translation="MAQINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
                     DKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASA
                     SFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
                     SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQG
                     RGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
     gene            1070..1651
                     /gene="sodB"
                     /locus_tag="JQ356_002806"
     CDS             1070..1651
                     /gene="sodB"
                     /locus_tag="JQ356_002806"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HAY4622838.1"
                     /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
                     GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG
                     SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
     gene            complement(1797..2966)
                     /locus_tag="JQ356_002807"
     CDS             complement(1797..2966)
                     /locus_tag="JQ356_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4622839.1"
                     /translation="MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGM
                     LISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRIL
                     TSLNHGAFFGLGSVVAASVEPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRM
                     SFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMF
                     TLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYPGGKLADRSVNGTLKGFLLLL
                     MVIMLAIPFLARNEFGAAISMVVWGAAAFAVVPPLQMRVMRVASEAPGLSSSVNIGAF
                     NLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS"
     gene            complement(3132..3221)
                     /gene="ynhF"
                     /locus_tag="JQ356_002808"
     CDS             complement(3132..3221)
                     /gene="ynhF"
                     /locus_tag="JQ356_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein YnhF"
                     /protein_id="HAY4622840.1"
                     /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH"
     gene            3520..4545
                     /gene="purR"
                     /locus_tag="JQ356_002809"
     CDS             3520..4545
                     /gene="purR"
                     /locus_tag="JQ356_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HAY4622841.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID
                     NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ
                     GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN
                     VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG
                     PFRDYRR"
     gene            complement(4542..5474)
                     /locus_tag="JQ356_002810"
     CDS             complement(4542..5474)
                     /locus_tag="JQ356_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4622842.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
                     RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
                     MSPALTWLLEYLGDSETLNKEWLREPEETPATGD"
     gene            5587..6798
                     /locus_tag="JQ356_002811"
     CDS             5587..6798
                     /locus_tag="JQ356_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HAY4622843.1"
                     /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
                     ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
                     VQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQ
                     AIFATLFAITVVLILPIFWLKPTTKAGNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
                     LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
                     LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEAGCQNH
                     GNAEVAHSESH"
     gene            7089..8237
                     /gene="cfa"
                     /locus_tag="JQ356_002812"
     CDS             7089..8237
                     /gene="cfa"
                     /locus_tag="JQ356_002812"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HAY4622844.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR
                     LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
                     EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSMVGVTISAEQQKMAQERCEGLDVTIL
                     LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
                     VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
                     IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
     gene            complement(8277..8918)
                     /gene="ribE"
                     /locus_tag="JQ356_002813"
     CDS             complement(8277..8918)
                     /gene="ribE"
                     /locus_tag="JQ356_002813"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HAY4622845.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH
                     NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
                     IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA"
     gene            9133..10506
                     /gene="mdtK"
                     /locus_tag="JQ356_002814"
     CDS             9133..10506
                     /gene="mdtK"
                     /locus_tag="JQ356_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HAY4622846.1"
                     /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI
                     MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM
                     RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV
                     SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF
                     TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVI
                     ILQRASR"
     gene            complement(10547..11803)
                     /locus_tag="JQ356_002815"
     CDS             complement(10547..11803)
                     /locus_tag="JQ356_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622847.1"
                     /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENT
                     VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH
                     PEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
                     LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
                     DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
                     PVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINL
                     NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD
                     ASRQTLCNALKLQPDEDGIGATLQPA"
     gene            12111..12187
                     /locus_tag="JQ356_002816"
     tRNA            12111..12187
                     /locus_tag="JQ356_002816"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12145..12147,aa:Val,seq:gac)
     gene            12192..12268
                     /locus_tag="JQ356_002817"
     tRNA            12192..12268
                     /locus_tag="JQ356_002817"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12226..12228,aa:Val,seq:gac)
     gene            12376..12681
                     /locus_tag="JQ356_002818"
     CDS             12376..12681
                     /locus_tag="JQ356_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HAY4622848.1"
                     /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
                     EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
     gene            12807..>13446
                     /locus_tag="JQ356_002819"
     CDS             12807..>13446
                     /locus_tag="JQ356_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622849.1"
                     /translation="MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPY
                     SDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILL
                     GEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI
                     ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQ"
BASE COUNT         3315 a         3467 c         3204 g         3460 t
ORIGIN      
        1 tcgccaacga aacgtatttt ttaacaataa aagctattaa ctttctcttc ttctatgcat
       61 tagaatcatc aagttttgta aatcagacgc aggcatgata gacctgcctt aacagaggga
      121 cgctcagtgg cgcagataaa ccgtatttcg atcacgctct gtgctttact ttttaccacc
      181 ctgcctttaa cgcctatggc ccatgcttca aagcaagcca gggagagttc tgctaccact
      241 catatcacca aaaaagcaga taaaaagaaa agcacggcaa ccaccaaaaa gacccagaaa
      301 acagcgaaaa aagccgccag taaaagtacg accaaaagca aaaccgcttc ttccgttaaa
      361 aaatcttcca ttaccgcttc taaaaacgcc aaaactcgca gcaaacacgc cgtcaataaa
      421 acggcctcag ccagctttac cgaaaagtgt accaaacgta agggctataa atcgcattgt
      481 gtgaaagtca aaaatgccgc gtcaggaact cttgccgacg cgcacaaagc gaaggtgcaa
      541 aaagctacga aagtggcaat gaataaactg atgcagcaaa ttggtaagcc atatcgttgg
      601 ggtggcagct caccgcgtac cggttttgat tgcagcggcc tggtttatta cgcttataaa
      661 gatttggtga aaattcgtat tccgcgtacg gcgaatgaaa tgtatcacct gcgtgatgca
      721 gcgccaatcg aacgtagtga actgaaaaac ggcgacctgg tctttttccg tactcaggga
      781 cgcggcacag ccgatcatgt cggcgtgtat gtcggcaacg gcaaatttat tcagtcaccg
      841 cgcacaggtc aggaaattca aatcacctct ctcagtgaag actactggca gcgccactat
      901 gttggcgctc gtcgggtaat gaccccaaaa acacttcgct aaaactttac cctgttgtta
      961 cggcaacagg gtaagttcat cttttgtctc accttttaat ttgctaccct atccatacgc
     1021 acaataaggc tattgtacgt atgcaaatta ataataaagg agagtagcaa tgtcattcga
     1081 attacctgca ctaccatatg ctaaagatgc tctggcaccg cacatttctg cggaaactat
     1141 cgagtatcac tacggcaagc atcatcagac ttatgtcact aacctgaaca acctgattaa
     1201 aggtaccgcg tttgaaggta aatcactgga agagattatt cgcagctctg aaggtggcgt
     1261 attcaacaac gcagctcagg tctggaacca tactttctac tggaactgcc tggcaccgaa
     1321 cgccggtggc gaaccgactg gaaaagtcgc tgaagctatc gccgcatctt ttggcagctt
     1381 tgccgatttc aaagcgcagt ttactgatgc agcgatcaaa aactttggtt ctggctggac
     1441 ctggctggtg aaaaacagcg atggcaaact ggctatcgtt tcaacctcta acgcgggtac
     1501 tccgctgacc accgatgcga ctccgctgct gaccgttgat gtctgggaac acgcttatta
     1561 catcgactat cgcaatgcac gtcctggcta tctggagcac ttctgggcgc tggtgaactg
     1621 ggaattcgta gcgaaaaatc tcgctgcata ataactgatg gcaaatgcag cattgcctga
     1681 tgcgcttcgt ttaccatgcc aacgcggatg aggcgttaac agcgcattcg gcaagataaa
     1741 tcgcacgttg tcagcaactg taacgcagaa ggttatcctt ctgcgttttt gtttaattag
     1801 ctgttagcaa cgcaaactgt ttcaggttgt tttctggctg acataaacac cagcaataat
     1861 gccagtcccg cgacaatcgc tcccatcacc ggcacaaagc tgtatcccag cccagcggaa
     1921 attaccgcac caccagcagc tgctcccagc gcatttccaa gattaaaggc accaatattg
     1981 actgatgaag acagacctgg cgcttcactg gcgacacgca tcacgcgcat ctgtaacggc
     2041 ggtacgaccg caaaggctgc tgcgccccac accaccatgc taatagctgc gccgaactca
     2101 ttgcgggcca ggaacgggat tgccagcata atcaccatca acaacaacaa aaagcctttc
     2161 aacgtgccgt taactgaacg atctgccagt ttgccgccgg gatagttacc gatagagaat
     2221 ccgacaccaa tcagcaccag cattgccgtg acgaacaccg gtgttgcgtg ggtaatactt
     2281 tgcagtaccg gagagatata ggtgtagaga gtaaacattg caccagctcc cagtaccgtc
     2341 gtcagcaatg cagacaacac ctgcggacgc attaataccg ccagctcttt tttcacttca
     2401 ggtcgtgccc ctgcaccacc tttaggtaat gagaagaaca gacttaccat tgaaatcact
     2461 cccagccccg ccgttgccag aaatgacatc cgccagccga tggtttcacc caaccaggtc
     2521 gccgccggca cgccaccgat atttgccagg gttaacccca taaacatagt ggcaactgcg
     2581 ctggcctgtt tatgttttgg ctccacgctt gcggccacga ctgaacccaa accaaaaaat
     2641 gctccgtgat tcaggctggt caaaatgcgt gaaagcatca gggtcatata atccggcgcg
     2701 atggcggaaa gtacgttgcc gagcgtgaaa attgccatca ggaaaatcaa cgcactgcgg
     2761 cgggcacgat gagaaagtag aagcgtcatc agcggcgcgc caaccattac gccaactgca
     2821 taggcactga ttaacattcc ggcagcggga atcgagacat ccacaccgcg cgcaatgacg
     2881 ggcaacaagc ccattggcga gaactccgtt gtcccgatac caaacgcgcc aatcgccaga
     2941 gccagcaacg gatagttaat tttcatgcct tatctccacc tcttcgcgtc attacgcgat
     3001 attcattaaa gtggcgaaag catgacagca atcacaaaaa aatgaaaata acaaaaagag
     3061 aaaacacttt tgccattttg ctaacaaaca ggaaggagat gcgagggaga acgcgctccc
     3121 tcgagaggaa atcagtgcag cgcggcagtc aaacccacgg ccacgatcaa accgaggacg
     3181 ataatcgttg ttaccagtga aaatttaagg tcggtgctca tcaagttttc tcctttttta
     3241 ttaccacaca aatagtgata ttacgcattt ttacacactg tgatgaaaaa atctcccgtc
     3301 atttataatg ataagtgttt ttaccacttc cccttttcgg caagatcggc caaaattcca
     3361 cgcttacact atttgcgtac tggccattga ccccttcctg acgctccgtg tcgtttttcc
     3421 ggcgtaccgc aacacttttg ttgtgcgtaa ggcgtgtaaa ggcaaacgtt taccttgcga
     3481 ttttgcagga gctgaagtta gggtctggag tgaaatggaa tggcaacaat aaaagatgta
     3541 gcgaaacgag caaacgtttc cactacaact gtgtcacacg taatcaacaa aacacgtttc
     3601 gtcgctgaag aaacgcgcaa cgccgtgtgg gcagcgatta aagaattaca ctactcccct
     3661 agcgcggtgg cgcgtagcct gaaggttaac cacaccaagt ctatcggttt gctggcgacc
     3721 agcagcgaag cggcctattt tgccgagatc attgaagcgg ttgaaaaaaa ttgcttccag
     3781 aaaggttaca ccctgattct gggtaatgcg tggaacaatc ttgagaaaca gcgggcttat
     3841 ctgtcgatga tggcgcaaaa acgcgtcgat ggtctgctgg tgatgtgttc tgagtaccca
     3901 gagccgttgc tggcgatgct ggaagagtat cgccatatcc caatggtggt gatggactgg
     3961 ggtgaagcaa aagctgactt caccgatgcg gtcattgata acgcgttcga aggcggctac
     4021 atggccgggc gttatctgat tgaacgcggt caccgcgaaa tcggcgtcat ccccggcccg
     4081 ctggaacgta acaccggcgc aggccgcctt gccggtttta tgaaggcgat ggaagaagcg
     4141 atgatcaagg tgccggaaag ctggattgtt cagggtgact ttgaacccga atctggttat
     4201 cgcgccatgc agcaaatact gtcgcagccg catcgcccta ctgccgtctt ctgtggtggc
     4261 gatatcatgg caatgggcgc actttgtgct gctgatgaaa tgggtctgcg cgtcccgcag
     4321 gatgtttcgc tgatcggtta tgataacgtg cgcaacgccc gctattttac gccggcgctg
     4381 accacgatcc accagccaaa agattcgctg ggtgaaacag cgttcaacat gctgttggat
     4441 cgtatcgtca acaaacgtga agaaccgcag tccattgaag tgcatccgcg cttgattgaa
     4501 cgccgctccg tggctgacgg cccgttccgc gactatcgtc gttaatcacc cgttgcggga
     4561 gtctcttccg gctcccgcag ccactcctta ttcagcgtct cactatcgcc gagatactca
     4621 agcagccagg ttaacgcagg cgacatatca ttttgctgcc atgtcagaca acatgccgaa
     4681 tccgggaagg ggttttccaa ttcaagtgct acccacttcc cctcattaag ccacggtttg
     4741 gcgaaatgtg ttggcaccat ccctatgcat aatcctgccg agatacaggt tgccgatgat
     4801 tcccagtcag gcacgacaac tcttttttgg ttatccagta accaggtaat acgtttaggt
     4861 agcgttcgcg aggtgtcttc gcgcaccaac gacggccagt tgcgcaacgt atcatcgctg
     4921 aatgggccat ccatcaacgc cagcgggtgg tggctggcaa caacgcaact ccagcttagc
     4981 atccccatat cccggaaggc ataacgaccg cctaccggaa tcgcgcgtgt tgcgccaatc
     5041 gccagttcca cgcgcccgtc ggaaagcgca tcccagacac cgttgaacac ttcctgaaag
     5101 acaagaagtt cgacatcatc aaaatggcga taaaaatcaa cgatcatctg ccgtgtacgt
     5161 tctggcctga caatattatc cactgcgata gctaactgac cgcgccagcc gttcgctatc
     5221 tgctgacatt gctggcgggt gatctgcatt tttttgacaa cagagcgccc ttctttgaga
     5281 aaccacgctc cagcagcggt cagctccaca tcacggtgcc gtcgttcaaa gagcggcacc
     5341 gccagccact cttccagctg acgcacggta tagctgaccg cagaaggaac gcgatgcagc
     5401 tcctgtgccg cagcgctaaa actaccatta cgcgctaccg catcaacaac ttcgagtgaa
     5461 tattctgacc acatagtctg cctgcaaaat ttttgaaatc agtcatcaaa tattaccgtt
     5521 tcacaacact aatttcactc cctacacttt gcggcggtgt ttaattgaga gatttagaga
     5581 atatacatgc aacctgggaa aagattttta gtctggctgg cgggtttgag cgtactcggt
     5641 tttctggcaa ccgatatgta tctgcctgct ttcgccgcca tacaggccga cctgcaaacg
     5701 cctgcgtctg ctgtcagtgc cagccttagt ctgttccttg ccggttttgc cgcagcccag
     5761 cttctgtggg ggccactctc cgaccgttat ggtcgtaaac cggtgttatt aatcggcctg
     5821 acaatttttg cgttaggtag tctggggatg ctgtgggtag aaaacgccgc tacgctgctg
     5881 gtattgcgtt ttgtacaggc tgtgggtgtc tgcgccgcgg cggttatctg gcaagcgtta
     5941 gtgacggatt attatccttc acagaaagtt aaccgaattt ttgcgaccat catgccgctg
     6001 gtgggtctat ctccggccct ggctcctctg ttaggaagct ggctgctggt ccatttttcc
     6061 tggcaggcga ttttcgccac cctgtttgcc attaccgtgg tgctgattct gcctattttc
     6121 tggctcaaac ccacgacgaa ggccggtaac aatagtcagg atggtctgac ctttaccgac
     6181 ctgctacgtt ctaaaaccta tcgcggcaac gtgctgatat acgcggcctg ttcagccagt
     6241 ttttttgcat ggctgaccgg ttcaccgttc atccttagtg aaatgggcta cagcccggca
     6301 gttattggtt taagttatgt cccgcaaact atcgcgtttc tgattggtgg ttatggctgt
     6361 cgcgccgcgc tgcagaaatg gcaaggcaag cagttattac cgtggttgct ggtgctgttt
     6421 gctgtcagcg tcattgcgac ctgggctgcg ggcttcatta gccatgtgtc gctggtcgaa
     6481 atcctgatcc cattctgtgt gatggcgatt gccaatggcg cgatctaccc tattgttgtc
     6541 gcccaggcgc tgcgtccctt cccacacgca actggtcgcg ccgcagcgtt gcagaacact
     6601 ctacaactgg gtctgtgctt cctcgcaagt ctggtagttt cctggcttat tagtatcagc
     6661 acgccattgc tcaccaccac cagcgtgatg ttatcaacag tagtgctggt cgcgctgggt
     6721 tacatgatgc aacgttgtga agaagctggc tgccagaatc atggcaatgc cgaagtcgct
     6781 catagcgaat cacactgatc tatatcgata tacttatact taggctgcta acaaaatttt
     6841 gttgtatgat tgaaattagc ggcctatact aatttcgagt tgttaaagct acgataaata
     6901 ttatgttttt acggggacag gatcgttccc gactcactat ggatggtcat ttcggcaagg
     6961 gttcctcctt tccctctgtt ctacgtcgga ttatagactc gcggtttttt ctgcgagatt
     7021 tctcacaaag cccaaaaagc gtctacgctg ttttaaggtt ctgatcaccg accagtgatg
     7081 gagaaactat gagttcatcg tgtatagaag aagtcagcgt accggatgac aactggtacc
     7141 gtatcgccaa cgaattactt agccgtgccg gtatagccat taacggttct gccccggcgg
     7201 atattcgtgt gaaaaacccc gattttttta aacgcgttct gcaagaaggc tctttggggt
     7261 taggcgaaag ttatatggat ggctggtggg aatgtgaccg actggatatg ttttttagca
     7321 aagtcttacg cgcaggtctc gagaaccaac tcccccatca tttcaaagac acgctgcgta
     7381 ttgccggcgc tcgtctcttc aatctgcaga gtaaaaaacg tgcctggata gtcggcaaag
     7441 agcattacga tttgggtaat gacttgttca gccgcatgct tgatcccttc atgcaatatt
     7501 cctgtgctta ctggaaagat gccgataatc tggaatctgc ccagcaggcg aagctcaaaa
     7561 tgatttgtga aaaattgcag ttaaaaccag ggatgcgcgt actggatatt ggctgcggct
     7621 ggggcggact ggcacactac atggcatcta attatgacgt aagcatggtg ggcgtcacca
     7681 tttctgccga acagcaaaaa atggctcagg aacgctgtga aggcctggat gtcaccattt
     7741 tgctgcaaga ttatcgtgac ctgaacgacc agtttgatcg tattgtttct gtggggatgt
     7801 tcgagcacgt cggaccgaaa aattacgata cctattttgc ggtggtggat cgtaatttga
     7861 aaccggaagg catattcctg ctccatacta tcggttcgaa aaaaaccgat ctgaatgttg
     7921 atccctggat taataaatat atttttccga acggttgcct gccctctgta cgccagattg
     7981 ctcagtccag cgaaccccac tttgtgatgg aagactggca taacttcggt gctgattacg
     8041 atactacgtt gatggcgtgg tatgaacgat tcctcgccgc atggccagaa attgcggata
     8101 actacagtga acgctttaaa cggatgttta cctattatct gaatgcctgc gcaggtgctt
     8161 tccgcgcccg tgatattcag ctctggcagg tcgtgttctc acgcggtgtt gaaaacggcc
     8221 ttcgagtcgc tcgctaaagg ctattctatc gccccctctc cgggggcgat ttcagatcag
     8281 gcttctgtac ctggttgatt catggcattt tctcgtgccg ccagcacacg ttctaccgta
     8341 tctaccactg cctgagtttg tggatcaatt tcaatgttga cgcgtgcgcc gagttttttc
     8401 ttcccaagag tcgtgcgttc cagagtttcc ggaattaaat ggacgcaaaa acgcgttggc
     8461 gtgacttcgc cgacggtcag gctaataccg tcgatgccaa taaatccttt gtacaggata
     8521 tatttcatca actgactatc ctggacttta aaccagatct ggcgattatt ttccgaggtt
     8581 aatattttcg ccacttcagc ggtggtcata atatgacctg acattaagtg tccgccaatt
     8641 tcatcactga atttcgccgc acgctcaacg tttacccaat cccccacttt taaatcgcca
     8701 agattggtaa tgcgtaacgt ttctttcatc aggtcaaaac tgacatggtt gccgttaatt
     8761 tccgtcacgg tcaggcagca accgttatgc gccacggaag caccggtttc caggccgtcc
     8821 agcatgtggt cgggtaactc caccacatgc gtacgaaaat ttggtttctc gtcaatcgac
     8881 accagttttg cggtgccctg tacaatcccc gtaaacatac ttacaactcc tgaaatcagt
     8941 taagacattc tgttcagcac aatagcaggt ggcaaacgcc cttaccagtg aaggggtaag
     9001 aatgactatt ttttcactgg agaattaata aatcctcgct acaatagact gaatttcccc
     9061 tgcttcttct ttttgctgcc cattcaggcg gctttttagt ctctcatata actacaaata
     9121 aaaggtgttc acgtgcagaa gtatatcagt gaagcgcgtc tgttattagc attagcaatc
     9181 ccggtgattc tcgcgcaaat cgcccaaact gcgatgggtt ttgtcgatac cgtgatggcg
     9241 ggcggctata gtgccaccga catggcggcg gtcgctatcg gtacttctat ctggcttccg
     9301 gcgatcctct ttggtcacgg actgctgctg gcattaacgc cggttatcgc gcaattaaat
     9361 ggttccggtc gacgtgagcg cattgcgcat caggtgcgac aaggtttctg gctggcaggt
     9421 tttgtttccg ttctcattat gctggtgctg tggaatgcag gttacattat ccgctccatg
     9481 gaaaacatcg atccggctct ggcggacaaa gccgtgggtt atctgcgtgc gttgttgtgg
     9541 ggcgcgccgg gctatctgtt cttccaggtt gcccgtaacc aatgtgaagg tctggcaaaa
     9601 accaagccgg gtatggtaat gggctttatc ggcctgctgg tgaacattcc ggtgaactat
     9661 atctttattt atggtcattt cggtatgcct gagctcggtg gcgttggttg tggcgtggct
     9721 actgcggcgg tgtattgggt catgttcctt gccatggttt cttacattaa acgcgcccgc
     9781 tccatgcgcg atattcgtaa cgaaaaaggc accgcgaaac ccgatcctgc ggttatgaaa
     9841 cgactgattc aactcggttt accgattgcg ctggcactat tctttgaagt gacactgttt
     9901 gccgtcgtgg ctctgttagt gtctccgctc ggtattgttg atgtcgcagg acaccagatt
     9961 gccctgaact ttagttcact gatgtttgtg cttccaatgt cgctggcggc agcggtaact
    10021 atccgcgtag gttatcgtct gggtcagggc tcaacgctgg atgcgcaaac cgctgcgcgg
    10081 accgggctta tggtgggtgt ctgtatggca accctgacgg ccattttcac ggtttcactc
    10141 cgggagcaaa tcgccctgtt gtacaacgac aatcccgagg ttgtaacgct ggctgcgcat
    10201 ttgatgttgc tggcggcggt atatcagatt tctgactcaa tccaggtgat tggcagtggg
    10261 attttgcgtg gttataaaga tacgcgttcc attttctata tcacctttac agcttactgg
    10321 gtgctgggct tgccaagcgg ctatattctg gcactgaccg atctggtcgt tgaacctatg
    10381 gggccagcag gcttctggat aggctttatt atcggcctga catcggcagc cattatgatg
    10441 atgttgcgta tgcggttcct gcaacgtctg ccgtcagtta tcattctgca acgagcatcc
    10501 cgctaataaa gacaaggcgc aaccttcacg ggttgcgcct gtgtttttac gcaggctgga
    10561 gcgttgcgcc aatcccgtct tcgtctggct gtaatttcag agcgttgcac agagtttgcc
    10621 gactggcatc tgttatctca acgtgtatat caccggtaac ttcccctttc acattgatga
    10681 agtcaggtga gatttctttc gcactggttt gcaggcaaat cgctccctct ccgcgcaggc
    10741 gtttcacttt cagttgcaca tgcgttgccg caccagtgat cagccacagt tttccgccat
    10801 tcagattgat gttaccaaca ataaaagtga caccgtcacc ttttaccgta ctgccgtcga
    10861 gaatcaacac accgccctgc tgtacagtaa tcgttgattg ttgcagatct gcgccatagc
    10921 caataatcat tgaagcgccg tccagtaatg caacactccc ggtcagttca accggtgcgc
    10981 gatcttcctc tacgacaaaa ttttcgtccg cgctggtggg tgacaacagg atcactgttc
    11041 caccttgtat taccgcattt tccagcgtac cggcatgcac ttcagcccga ccacccacat
    11101 tcacggacag gttttgcgtc ttaccggaac tgtagagctg aaggccatcc gtccccagac
    11161 gataaatgga tccattctca acaatggtgt cagagtcttc accaccgaga ttattcatgg
    11221 tgccaccagc aagcaacgta tcactggctt tcccggccag cataaaaacg ccgccctgat
    11281 taatctcaca attgctggct tccccacctg gatacaccaa caattcacca ccttcatcta
    11341 ccacgaccgc tgaggttgtc ccattaacca acaggccgcc ctcttgatcg agaatgattt
    11401 tttccgcgcg atgtccttcc agtacacgca ggttaccgcc attttccagc aacaaaccgc
    11461 aggcataacc ctgatcaacg ctgaattcac cttcgggatg gcggccatta accgtagcga
    11521 gcgtagagag actaattgcg cctccctcgg actgaacaat atctgtggca atggcaccgt
    11581 cgctgaccga tagcgtgcca ttgttaccgt actgtgtgca tttggcgatc ccaccggttg
    11641 ccactttcaa ccagccagcc cccgtgacta cggtattttc ggctcttccg ccagcttcaa
    11701 caatcaactc gccttcagta agttgcgtcg cgccaatgac ctcgccggtc ttaacaattt
    11761 gcacattccc gtcgctcatc aagtttttcg catcagatcc catgatttat tcctttgctg
    11821 catctgtgtg cctttattgc tacctaaatg taaaggctac ggaggattta tccacgacag
    11881 atttgagatg gtggcaaaca actctgttta aactctgata cacgaattat tgggttgtat
    11941 cagatgtaaa tgcgatcctg aataaaaatc gcccttgcaa atcaacaaaa tatagccaat
    12001 ttgcttaaaa gctctgcaaa cggtcgaaat agcgcagaaa attacgtttt gcctcttgcc
    12061 accttcccac tctgccgcta atattcgtcc ccgttgtcac ctacaacgtt gcgttcatag
    12121 ctcagttggt tagagcacca ccttgacatg gtgggggtcg ttggttcgag tccaattgaa
    12181 cgcaccatcc tgcgtccgta gctcagttgg ttagagcacc accttgacat ggtgggggtc
    12241 ggtggttcga gtccactcgg acgcaccaga ttttcttaat ctggtcttct cctttttccc
    12301 tctgtttctt ctctgtatcc aatacgttaa aagatttaca ctgtcttcgt atgcgttatc
    12361 agaaggagaa tcgctatggc aactttgtta caacttcatt ttgcttttaa tggcccattt
    12421 ggcgacgcaa tggctgagca gcttaaaccg cttgctgagt cgattaatca ggaacctggt
    12481 tttctgtgga aggtatggac agaaagtgaa aagaaccacg aagccggtgg gatctatctt
    12541 tttactgatg aaaaaagcgc ccttgcctat ctggaaaaac atactgcccg acttaaaaat
    12601 ctcggcgttg aggaagttgt cgccaaagtt ttcgatgtca atgagccact gagtcaaatc
    12661 aatcaggcaa aactcgcctg acagaattta atcaagggcg gttagcgccc ttttcatccc
    12721 tgtctgaaat ttctcaaatt ctaaaaatct caaccaaact tatctgataa cactaaattc
    12781 gaaagaatgc gtacaggtaa gtaacaatga aaaaaattgc tattgtgggt gccgggccta
    12841 cggggatcta caccttattc tcgcttctac agcaacaaac tccactttct atttctatct
    12901 tcgagcaggc tgacgaggcc ggtgtcggga tgccatacag tgatgaggaa aactcaaaaa
    12961 tgatgctggc aaatattgcc agtattgaaa taccgccgat taattgtacg tatctcgaat
    13021 ggctacaaaa gcaagaagcc agccatctcc agcgttatgg cgttaaaaaa gaaaccttgc
    13081 acgatcgtca gtttttaccg cgaattctgc tgggcgaata tttccgcgat caatttttac
    13141 gattagtaga ccaggcacga cagcaaaaat ttgcagtggc tgtttatgaa tcatgccagg
    13201 ttaccgatct gcaaattaca aatgctggcg tcatgctcgc tacaaatcag gatttaccca
    13261 gcgagacgtt tgatttagcg gtgattgcca cgggtcacgt ctggcctgat gaagaagaag
    13321 caaccagaac gtattttccc agtccgtggt caggcctgat ggaagcaaag gtcgatgcgt
    13381 gtaacgtggg tattatggga acatccttga gcggactgga tgcggcaatg gcagtggcta
    13441 ttcagc
//
LOCUS       DADKRT010000115        13369 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.116, whole genome shotgun sequence.
ACCESSION   DADKRT010000115 DADKRT010000000
VERSION     DADKRT010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13369
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.116"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(171..1094)
                     /locus_tag="JQ356_002820"
     CDS             complement(171..1094)
                     /locus_tag="JQ356_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310535.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4622850.1"
                     /translation="MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLE
                     QTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISS
                     FGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARK
                     LATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKV
                     TGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVS
                     RLATSAKVRITVEFLRQYFAEHYPNFSLEHA"
     gene            1197..2282
                     /gene="dmlA"
                     /locus_tag="JQ356_002821"
     CDS             1197..2282
                     /gene="dmlA"
                     /locus_tag="JQ356_002821"
                     /EC_number="1.1.1.83"
                     /EC_number="1.1.1.85"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional
                     D-malate/3-isopropylmalate/tartarate dehydrogenase"
                     /protein_id="HAY4622851.1"
                     /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFDLSFEQMG
                     WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ
                     YINLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES
                     VFTRRGVDRILRYAFELAQSRPRKTLTYATKSNGLAISMPYWDERVEAMAENYPEIRW
                     DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP
                     SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA
                     HGPKTPDMKGNATTPQVADAICKIILR"
     gene            2532..4142
                     /gene="yeaV"
                     /locus_tag="JQ356_002822"
     CDS             2532..4142
                     /gene="yeaV"
                     /locus_tag="JQ356_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter YeaV"
                     /protein_id="HAY4622852.1"
                     /translation="MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTF
                     VTRTLGSAVQVLVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSST
                     LYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFH
                     VRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSA
                     LTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPT
                     EFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTR
                     VSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGETAVQ
                     QVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWC
                     VVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQV
                     EHYLPQTPVEALEKTPVIPAGTVFKGDN"
     gene            4174..5298
                     /gene="yeaW"
                     /locus_tag="JQ356_002823"
     CDS             4174..5298
                     /gene="yeaW"
                     /locus_tag="JQ356_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaW"
                     /protein_id="HAY4622853.1"
                     /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA
                     KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK
                     AKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
                     ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTSANWKNIVDNYLECYHCGPAHPG
                     FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI
                     KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK
                     GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD"
     gene            5354..6319
                     /gene="yeaX"
                     /locus_tag="JQ356_002824"
     CDS             5354..6319
                     /gene="yeaX"
                     /locus_tag="JQ356_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaX"
                     /protein_id="HAY4622854.1"
                     /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVI
                     VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGNRLTISTP
                     NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV
                     QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIAAD
                     TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
                     TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
     gene            complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="JQ356_002825"
     CDS             complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="JQ356_002825"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310540.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HAY4622855.1"
                     /translation="MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD
                     GEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
                     SAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
                     KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
                     WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLTLVE
                     KAQTLPEEALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
                     NWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
     gene            complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="JQ356_002826"
     CDS             complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="JQ356_002826"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HAY4622856.1"
                     /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGVGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGASAVVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG
                     GQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL
                     TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="JQ356_002827"
     CDS             complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="JQ356_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein YeaY"
                     /protein_id="HAY4622857.1"
                     /translation="MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGRSPTPQQDLVRV
                     MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
                     GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
                     DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE"
     gene            complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="JQ356_002828"
     CDS             complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="JQ356_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HAY4622858.1"
                     /translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
                     ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
                     WRKNGATRVLAAIDARMGEVYWAEYQRDENGIWRGEETEAVLKPELVHERMQQLSGEW
                     VTVGTGWQAWPDLGKESGLVLRDGEVLLPATEDMLPIACQIFAEGKTVAVEHAEPVYL
                     RNNVAWKKLPGKE"
     gene            complement(10833..12743)
                     /locus_tag="JQ356_002829"
     CDS             complement(10833..12743)
                     /locus_tag="JQ356_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HAY4622859.1"
                     /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE
                     AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
                     RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
                     ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW
                     IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGSAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSSR"
     gene            12875..13219
                     /locus_tag="JQ356_002830"
     CDS             12875..13219
                     /locus_tag="JQ356_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY4622860.1"
                     /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
                     QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
BASE COUNT         3200 a         3555 c         3335 g         3279 t
ORIGIN      
        1 accagatagg tccagtaatt cagaaccccg tattcagcga acacattaac ctctttaatt
       61 atctttcgat catgcgcgat taaaggtgaa tatgctaacc aatctgtagc ggcttagaaa
      121 ggagaaaatc aggttttaac ccgatatcaa cccgataatt gaatcattaa tcaggcatgc
      181 tccagtgaaa aattcgggta gtgctcggca aaatactggc gtaaaaattc taccgttatc
      241 cgcactttcg ctgacgtcgc cagccttgaa acataaacgg cccagacgtt cgctggctgg
      301 taatattccg gtagcacttg cactaaatga ccactggcaa tgttttcgct aacatcccac
      361 caggaacgca gagcaatccc ctgcccatcg agacaccact gatggacaat ttctccatga
      421 ttagacgaca gtgggccggt gactttaatc gcatggtggc cttctttatt gcgtaattgc
      481 cagacaccaa aaggatgatc gcgctcttta atgaccaggc acggcaatgc agaaagatcg
      541 gttaaatgtt tcggcgcgcc atgttgcgca ataaattccg gcgacgcgca gagaatgcgg
      601 taattggtcg ccagtttgcg ggcgattaaa ttaggggcga tgtcatcgcc aatgcgaata
      661 tcgagatcga caccttcatt gaccaaatcg accagccggt cttccacatc aaaacgtaat
      721 tccagttgcg gatacgcctt cgccagcgct gataacgccg gagccaccac ctgtcgtcca
      781 aaaccaaagc tgctgataat acgcagcatc ccctgtggca cctgacgcac gtcagaaagt
      841 tcgtccatca tctgaccgac atcctgcaaa atccgctgcg cccattcata aatccgctct
      901 ccttcttcgg taatggtgac gcggcgggtg gtgcggtgta acaacaccac gtttagcgtt
      961 tgctccagca aggcgatgcg cttgctgacg aacgccggtg aaacgcccag ttcttccgcc
     1021 acggcggcaa aaccagcccg acgagccacc agcataaaga cgcgcaaatc attcagcagc
     1081 ggtaaattat tcatgattcg tgttttatgt ttcaccagtt acggggatta attccttttc
     1141 cgtcaattat aggatggtga tgttgtcaat tttgatggtc aggaagtgag aacccaatga
     1201 tgaaaacgat gcgtattgct gcgatcccgg gagacgggat tggtaaagaa gtccttcctg
     1261 aagggattcg cgtgttacag gctgccgctg agcgctgggg cttcgacttg agttttgagc
     1321 aaatggggtg ggcgagctgc gagtattaca gccatcacgg taaaatgatg ccggacgact
     1381 ggcatgagca acttagccgt ttcgacgcca tctattttgg tgccgtcggc tggccggata
     1441 ccgttccgga ccatatttcg ttgtggggtt cgctgctgaa atttcgtcgt gaattcgacc
     1501 agtacatcaa cctgcgcccg gttcgtctct ttcctggcgt tccctgcccg ctggcgggaa
     1561 aacagcctgg cgacatcgat ttttacgtgg tcagggaaaa caccgaaggc gaatattcct
     1621 cgctcggcgg tagagtgaat gaaggtacag agcatgaagt cgtcattcag gaatcggtat
     1681 ttacacgtcg tggtgtcgat cgcattttgc gttatgcctt cgaacttgcg caaagccgcc
     1741 cacgtaagac gctaacttat gccactaaat cgaacggttt agccatcagc atgccgtact
     1801 gggatgagcg agtggaagca atggccgaga attacccgga gatccgctgg gacaagcagc
     1861 atattgatat tctctgcgcg cgttttgtga tgcagccgga acgcttcgat gtggtggtgg
     1921 cgtccaattt gtttggcgat atcctttccg atcttggccc ggcctgcacc ggcaccattg
     1981 gcattgcccc atccgccaac ctgaatccgg aacgcacttt cccgtcgctc ttcgagcctg
     2041 tccacggttc cgcgccggat atctacggga aaaatattgc taaccctatc gccacgattt
     2101 gggccggggc aatgatgctc gattttctcg gcaatggcga tgagcgtttc cagcaagcgc
     2161 ataacggtat tctggcagca attgaagaag tgattgctca cgggccgaaa acacctgata
     2221 tgaaaggcaa tgccaccacg ccacaggttg ccgacgcgat ttgcaaaatt attttgcgtt
     2281 aaggtcaaac cagtttattt gaaccgcgtc actgacgcgg ttttttattc gttctttgca
     2341 gtaaataacc tgcgtcattt caccttttat tgtttccgtt tcgtgtttta tggctttccg
     2401 cattcttaat tgtttaattt atgtaatatt caaataatca atttgttaaa cacaacatac
     2461 aactcattac cctgcaaata attacaactg gcaaaagcca gagacgggct tttatgccca
     2521 ggagatgact catgatgagc aatgttaaga aaaaagatgt gccgctgata agcatcagcc
     2581 tggtggccat tcttttcatc gcagctgcat taagcctttt cccacaacaa tcggccgacg
     2641 cggccaacgc aatatacact tttgttacgc gtacgttagg ttccgccgta caggtattgg
     2701 ttttgctggc aatgggactg gtgatttatt tagccaccag taaatacggc aatattcgtc
     2761 ttggcgaagg aaaaccggaa tacagcacgc tctcctggct gtttatgttt atttgtgccg
     2821 gtttaggttc ttctacgctt tattgggggg ttgctgaatg ggcctattat tatcagacac
     2881 ctggattaaa tatcgcaccg cgttcacaac aggcactcga atttagcgtt ccctactctt
     2941 tcttccactg gggcatcagc gcctgggcaa cttatacgct ggcctcatta atcatggctt
     3001 atcactttca tgtgcggaaa aacaaaggtc tgagcctttc cggcattatt gctgctatta
     3061 ccggcgttcg cccgcaaggc ccatggggaa aactggttga tttgatgttc ctgatcgcca
     3121 ctgtcggcgc actgactatt tcccttgttg tcaccgcagc aacctttact cgtggacttt
     3181 ccgcactgac aggtttaccc gacaacttca ccgtgcaggc atttgtgatc ctgctttctg
     3241 gcggcatttt ttgcctaagc tcgtggattg gtatcaacaa cggtttgcaa cgtctgagca
     3301 aaatggttgg ctggggcgcg ttcctgctgc cattactggt gctgattgtc ggcccaaccg
     3361 aatttattac caacagcatc atcaatgcca tcggcctgac cacgcaaaac ttcctgcaaa
     3421 tgagcttatt caccgatccg cttggcgatg gttcatttac ccgcaactgg accgttttct
     3481 actggctgtg gtggatctca tacacccctg gcgtagcaat gtttgtcacc cgcgtttccc
     3541 gcggtcgtaa gattaaagaa gttatctggg gactgatcct cggcagcacc gtcggttgct
     3601 ggttcttctt cggcgtaatg gaaagctatg ccattcatca gtttatcaat ggcgtaatca
     3661 acgtcccaca ggtgctggaa acactgggcg gcgaaacagc tgtacagcaa gttctgatgt
     3721 cgttgccagc cggtaaattg ttcctcgccg catacctggg cgtgatgatt attttccttg
     3781 cctcgcatat ggatgcagtg gcctacacca tggcggcgac cagtacgcgt aatctccagg
     3841 aaggtgacga tcctgaccgt gggctgcgtc ttttctggtg cgtggtgatc actctgatcc
     3901 cgctttccat cttgtttacc ggtgcttcgc tggaaacgat gaaaaccacc gtcgtgctca
     3961 cagcccttcc cttcctcgtc attttactgg tgaaagtcgg cggatttatt cgctggctga
     4021 aacaggatta cgccgacatt ccggctcatc aagttgaaca ttatctcccg cagacaccgg
     4081 ttgaagccct ggaaaaaaca ccagtgatcc ctgcgggaac cgtattcaaa ggcgacaact
     4141 gagcgccatc atcctaacga taaaggtatc cctatgagca atctgagccc tgactttgta
     4201 ctacccgaaa atttttgcgc taacccgcaa gaggcgtgga ccattcctgc ccgtttttat
     4261 accgatcaga acgcgtttga acacgaaaaa gagaacgtct tcgccaaaag ctggatttgc
     4321 gtcgctcaca gcagcgaact ggcgaatgcc aatgattatg tgacgcgtga gatcattggc
     4381 gaaagcatcg tgctggtacg cggtcgtgat aaggttttgc gcgcgttcta taacgtgtgt
     4441 ccgcaccgtg gtcatcagtt gttgagcggt gaaggaaaag caaaaaatgt gattacctgc
     4501 ccgtatcacg catgggcatt caaactcgat ggcaatctgg cccatgcacg taactgcgaa
     4561 aacgtcgcca atttcgatag cgacaaagcg caactggttc cggtgcgtct ggaagaatat
     4621 gccggattcg tcttcatcaa catggacccc aacgccacca gcgtagaaga tcagttaccc
     4681 ggtctgggcg cgaaagtgct ggaagcctgc ccggaagtcc acgatctgaa actggcggcc
     4741 cgctttacca cccgcacgtc tgccaactgg aagaacattg tcgataacta tctcgagtgc
     4801 tatcactgtg gtccggcgca tccaggtttc tccgactccg tacaggttga tcgttactgg
     4861 cacaccatgc acggtaactg gacgctgcaa tacggtttcg ccaaaccgtc cgaacagtcg
     4921 tttaaatttg aagagggtac ggatgcggca ttccacggtt tctggctgtg gccgtgcacg
     4981 atgctgaacg tcaccccgat caaagggatg atgacggtca tttatgaatt cccggtggat
     5041 tctgaaacta ccctgcaaaa ctacgatatt tacttcacca atgaagagtt aaccgacgag
     5101 caaaaatcgc tgattgagtg gtatcgcgat gtgttccgtc cggaagattt acgtctggtt
     5161 gaaagcgtac agaaagggct gaaatcgcgt ggctatcgtg gtcaggggcg catcatggcc
     5221 gacagtagcg gtagtggcat ttccgaacat ggtatcgccc atttccataa tctgctggcg
     5281 caggtgttta aggactaatg acatcggcgg cggtattttc cgctgctggg ctgatttttg
     5341 atggagtaca gcaatatcag actatcaaat gtttgaagta caggtgagcc aggttgaacc
     5401 ccttaccgaa caggtgaaac gcttcacgct ggtggcaacc gatggcaaac cgctgcctgc
     5461 gttcaccgga ggaagtcacg tcattgtgca gatgagcgat ggtgataacc agtacagcaa
     5521 tgcgtattca ctactgagtt cgccgcatga cacctcttgt tatcagattg ccgttcggct
     5581 ggaggaaaac tcgcgcggcg gttcccgctt tttgcatcag caggtaaaag tgggcaatcg
     5641 gttaacgatt tcaacgccta ataacctgtt tgcgctaatt ccctcagcca gaaagcatct
     5701 gtttatcgcg ggcggtattg gtatcacccc tttcctgtcg cacatggcag agctgcaaca
     5761 cagcgacgtc gactggcagc tacattactg ctcgcgaaat ccagaaagtt gcgcatttcg
     5821 tgatgagcta gtccagcatc cgcaggctga gaaagttcac ttgcatcact catcaaccgg
     5881 aacacgactg gaattagcgc gattattggc ggatatcgaa cctggcacac acgtttatac
     5941 ctgtggtccc gaggcgctaa atgaagcggt aagaagtgaa gctgcgcgtc tggacatcgc
     6001 cgccgatacg ctgcactttg agcaatttgc tatcgaagac aaaaccggcg atgcctttac
     6061 cctggtgctt gcccgttccg gaaaagagtt tgtggtgccg gaagagatga ctattttgca
     6121 ggttattgaa aataataaag ccgcgaaagt ggaatgttta tgtcgtgaag gggtatgcgg
     6181 aacctgcgaa acagcaatac tggaaggtga agctgaccat cgggatcagt attttagcga
     6241 tgaagagcgt gccagccagc aaagtatgtt gatctgttgt tcgcgtgcga agggtaaacg
     6301 cctggtgttg gatttgtagt ttgccaaagc cggatgtggc gctgagcgcg cccagtccgg
     6361 cttcggaaga ttttactgcg gatattcctg caataaattg tgtaatgctt ccgccatcag
     6421 ctcaccacgc cagccggaaa tcagctccgg caaattgttc tgcggtttca gtttccagtg
     6481 ccagttcagc agttggttga tttgccgacg cgatgccagc aattcggcgc tgatcttatg
     6541 cgtttcgctc acgtcagtaa tcagcgactt aatcgcttta aacgctttac gataaccagg
     6601 catgtccatc aggttaagca tcggctgcgg taaggcctct tccggcaatg tctgcgcttt
     6661 ttccaccagc gtcagcagcg ttttaccgtg aaagcggatt tcgctaccgg ataaacccag
     6721 gctgtccagt tcgcctaaac ttcccggcat ataacgcgcg accgaccaca aatgctcttc
     6781 acgcacgaca aagttcaccg ccagatcacg ctctcgcgcc ttgcgcagtc gccagtcggc
     6841 taacagttgc agacaggcca gttggcgtgt gcgtaactgc caggcattgg tgatatcacg
     6901 ccaggcatct tccggcgcaa cgacttcctg acgacgcatt tgcatcaggc ggcattcatc
     6961 cagcgccgca ggtagccagc cggaggcctc cgtttctacc ataagcttgg cggtgatcgg
     7021 taacagatac cagacatccg ccgctgcgta ttcacactga cgttcggtca gcggtctggc
     7081 cagccagtcg gtgcgcgatt cactcttgtc cagcgtaacg ccggaatact cttccaccat
     7141 ggaagcgaaa ccccatgaca tcgggcgtcc gcagaaggca gaaaggattt gcgtgtcaat
     7201 caagggttgt ggtaattcgc caaagacatt gaggaacact tccagatctt cactgcctgc
     7261 atggagaaat tttgtgatgg acggatcgcg caggatcgct ttcagcggtg accagtcggt
     7321 gatcccgaga ggatcaatta gcgccagatg ctcgccatcg aaaagttgaa tcaaccccag
     7381 ctgcgggtaa taagtgcgcg tacgaacaaa ttcagtatcc agggctatcg ccggaaaggc
     7441 acggacggct tcacacaaag aagccagcgc atcgtccgtg gtaatcattt ggtaattcaa
     7501 attgttttct ctttagtggg cgtcaaaaaa acgccggatt aaccggcgtc tgacgactga
     7561 cttaacgctc aggctttatt gtccactttg ccgcgcgctt cgtcacgtaa ttctcgtcgc
     7621 aaaatttttc cgacgttaga tttcggtaac tcatcacgaa actccaccag cttcggtact
     7681 ttgtatcccg tgagctgacg gcggcaaaaa gtcaccagtg actcttcggt aagcgatgga
     7741 tcttttttca ctacgaagat tttcaccgct tcaccactgg agccggaagg tacgccaaca
     7801 gccgcgactt cctgtacgcc aggatgctgc atgacgacat cttcaatctc gttgggatag
     7861 acgttaaaac cggaaaccag aatcatgtct tttttacgat cgacaatgcg caggaatcct
     7921 tcttcatcca ttaccgcgat gtcgccggtg tgtaaccagc catttttgat gatttcatcg
     7981 gtagcatcgg gacgctgcca gtaacccagc atcacctgcg gtcctttgac acaaagctca
     8041 cccggttgac ctggtggtac ttcattatca tcatcatcca ccagtttggc ttccgtcgac
     8101 ggcaccggca aaccgatgct accactatga taatcaatat catatgggtt aacgctgacc
     8161 agcggcgcac actcggtaag gccatagcct tccagcagat actgtccggt cagtttcacc
     8221 caacgctctg ccaccacttg ctgcactggc atcccaccgc ctgcggaaag atgcagactg
     8281 gagaaatcca gctgctggaa ctctttattg ttcagcaacg cattgaacaa ggtgttaacg
     8341 ccagtgatag cggtaaacgg atatttcgct aactctttta ccaaccctgg aatatcacgc
     8401 gggttagtga taagcaggtt ctgcccaccc agttcgataa acagcaggca gttaatggtc
     8461 agggcaaaaa tgtgatacag cggcagtgcc gttactacca gttctttacc tggatgcagc
     8521 aacggcccat aggtggcgtt gacctgttcc aggttcgcca gcatattgcg gtgagtcagc
     8581 atcgcgcctt tcgccacacc tgtggtgccg ccggtgtatt gcaggaaggc taaatcttcc
     8641 ggcaccagtt cgggtttgac gtactgcatc cggtagccgt tatgcagtgc gctacgaaat
     8701 gaaatggcat ctggcagatg gtatttcggc accaaacgct tgatgtattt aacaacgaaa
     8761 ttgactaccg tgccttttgc cgtagatagc tgatcgccca tacgggtcag aattacgtgc
     8821 tgaacggcgg ttttatcaac cactttttcc agtgtgtgag caaagttaga cacgataaca
     8881 accgccgatg cgccgctatc gttaagctga tgctcaagct cacgcggggt atacaacggg
     8941 ttaacgttta cgacgatcat cccggcacgc aaaatgccaa acagcgccac cggatattgc
     9001 aataaattag gcatcatcaa cgcaacgcga tcgcctttct tcagccccac cccttgttgc
     9061 aaataagcgg caaacgcgcg actgcgttct tccagcttgc ggaaggtcat cacctccccc
     9121 atattcacaa acgcaggctg atcggcgtag cgcgcgaccg actgctcaaa catatctacc
     9181 agagattgat aacggtcagg gttgatctcc gtcggaacgt ccgcgggata acggttaagc
     9241 caaaccttct tcaattcttc acctctaaaa tgcgtgttcg tcgtcatcgc aaccccaaat
     9301 gatatacatg ccgttaacat aatattaact catcatacca gcttgataat tacccaacga
     9361 aaaggttgcg aagcgcgtca ctatttattt ttatctttac cgtaagaatg cagaaacagc
     9421 ggaccagccg ctgtttcttt ttctttaaaa acaagcaatt attcagttac aactgtttgt
     9481 actctcgcgg gaccgggatt ataccagccc catccgccgt agccataggg ccagccacga
     9541 ccgccataaa accatggatc aatcggctga ggcggcataa tcacctgctg ggttaaatgc
     9601 caacgtttgt aacccgttac ttgcatcacc ataaatttat agggcgtatt gccgattttg
     9661 ccgtcaaccg caccagtgat tggcccgact accgtaacca gttgtccacg gaaatccacc
     9721 gggtccagaa aaccgttcac atcggcataa atgcgaccgc gagaaggttc tcccagcgtc
     9781 ggtctggctc cgctgtccag cggtacggta gcaatttcca ggcgggtttt cccttgctgg
     9841 ttttgtaccg caaccacttt gccaccaaag cgtgcctcct gaccaacgta cagctgcggc
     9901 gcactcatca cccgaactaa atcttgttgc ggcgtgggac tgcggccttt aatggcgtcc
     9961 ggcacagtga cacaaccgct cagcattagc gcaaacgtac ctgccagtat gcctttgata
    10021 acattctttt gaaccgccat gatgcgactc ctttttttct cagagcatac tcttaagatt
    10081 cattctttgc ccggaagttt cttccatgcg acgttgttac gtaaataaac cggttcggca
    10141 tgttccaccg ccaccgtttt accctcggca aatatctgac acgcaatcgg cagcatatct
    10201 tccgtcgctg gcagtaaaac ttctccgtcg cgcaaaacca gcccgctctc tttaccgaga
    10261 tccggccagg cttgccagcc cgtccctacc gttacccatt cgccggaaag ctgttgcatt
    10321 cgttcatgaa cgagttcggg tttgagtacg gcttcggttt cttcaccgcg ccagataccg
    10381 ttttcatcac gctgatattc ggcccagtaa acttcgccca tccgcgcatc aatggcagcc
    10441 agcacgcggg ttgcgccgtt tttgcgccac gccccttgcg ccattgtcat tagcgtggag
    10501 acgccaatca tcggcagctc tgcgccaagt gccagccctt gcgcaatgcc aataccaatg
    10561 cgcacgccgg taaagctacc ggggccgcgc ccgtaagcca gagcgttaat atcagtcagg
    10621 gaagttccgc tggtggtcag gatatcctgc accatcggta agattcgttg agtatgttca
    10681 cgagggcaaa gctcaaaatg agcgttgaca gtaccgtcgt tccacagggc gacagagcag
    10741 gcctctgtcg cggtatcgat agccagaatt cgcatgggtc ttcgtgctta gatcaataaa
    10801 aaggcgcgca tcataccata ctccgtaaca aattacctgg aggatggtat cgcaaggaaa
    10861 cgaaccgcac gggcaatgtc acgggtgcgc ggcgcgggcg gcagactggc gagaaacgtc
    10921 gcgccgtaag ggcgcatcac cagccgattg tcacaaatca ccaaaacccc gcgatcgtcg
    10981 gcgtcgcgaa tcagtcgccc taccccctgc ttgagagtaa tcaccgcatc cggcagttgt
    11041 acttcatcga acgggtcgcc accgcgcaaa cggcaatctt ccatgcgcgc ttttaacagc
    11101 gggtcatccg gtgaggtaaa cggcaacttg tcgataatca ccaatgacaa tgtatcgcca
    11161 cgcacgtcca ccccttccca gaaactactg gttgccacaa gaagcgcgtt accggcgctg
    11221 acaaattgct gcaacagttg ccctttgctg gtttccccct gcaacaaaac gggaagcgtc
    11281 atggtagcgc ggaactgctc ggccagatca cgcatcatgg cgtgcgaggt acaaagcata
    11341 aaacaacgac cgttgttagc ttcgatgatc ggtcgcagca ttgccgctaa ctggcgagca
    11401 gaacctggct ggttggtttg cggcagattg cgcggcacac agagtaacgc ctggcggctg
    11461 taatcaaacg ggcttggcaa tagcaacgac tccgcctgtt ctatcccaag ccgcgaggtg
    11521 aaatgatgca gatcgtcgtt caccgacagc gttgctgagg tgaagatcca gctaccaggc
    11581 ttttgcgcca ttaactcttt gaatttatcc gccacgctga gcggcgtgag agccagagta
    11641 aaatggcgcg aagtgcattc gtaccagtag ctgtagcccg gctgattgat ctcttttagc
    11701 cgcttcagcc gtgtgcgata caacgtagcg cgctcaaatg ccgcatccag caaggcggaa
    11761 cgccccagtg acagtttcgc cacgtcataa caaagttcca gggtgtcatc gagcagtaaa
    11821 aatgcccgct gaatttgcgg attagctaac agctcacgca ggttaccgcg ataacctggc
    11881 tcaccgagtt gcagacgaaa atcctgcgca ctctgggcaa gacgatcagc gcacttttgt
    11941 aactgctggg tgtcttttaa ttcggtgcgg taggcgatgg tgatgtcttt tgccaggtcg
    12001 agcagttgtc gactggagag tgactgacca aaatactggc tggcaatgtc cggtagctgg
    12061 tgggcttcgt cgaagatcat gacgtccgct tccgggatca gttcgccaaa tccactctct
    12121 ttaaccacca tatccgccag aaagagatga tggtttacca ccaccacatc ggcgtccatc
    12181 gcttttttac gtgctttgac cacaaagcaa tctttataca tcgggcagtc gctgccaaga
    12241 cagttgtcgt tggtgctggt aaccagcggc cacgcctgtg aatcttccgc cacgctgacg
    12301 caggtgctga tatcaccatc gactgtttga ttagaccagg agcgcagcag gatcacatcg
    12361 cttaagattt gtaccggcag atcgcccccc gccagcgcct gctgttcgag acgttcgagg
    12421 cagaggtagt ttgagcgccc tttcagcagc gccacgttgc ccgtatattt caatgccttt
    12481 gagactgttg gcaaatcgcg gctgtagagc tgatcctgca acgcttttga gccggtcgag
    12541 ataatgactt tctttttcgc ccgcagcgca ggagccaggt aagcgtaggt tttgcccgta
    12601 ccggttcctg cttccaccac cagcggctgg cctttttcta tcgcctgggt gacggctacc
    12661 gccatctgtc gctgtggttc tcgcggctta aagcctggta tcgctttcgc cagctgaccg
    12721 tctggtgcaa aatcgtccgt cacactaccc cctgttgatt tgaacgggga ttatgtcagg
    12781 atgagggcgc tttcgccagt tgaagtggtg acggcaacct cacattgtgg cagtctttgc
    12841 agcacgaaaa tggaagtata atgaggacaa aatgatgact atcgttcgta tcgatgctga
    12901 agcccgctgg tctgatgtag taatccacaa caacacgctc tactacactg gtgtaccgga
    12961 aaacctcgac gccgatgctt ttgagcaaac cgccaacacg ctggcgcaga ttgacgccgt
    13021 gctggaaaaa cagggcagca ataaatcgag cattctggat gccaccattt tcctggctga
    13081 taaaaacgac ttcgcggcga tgaataaagc gtgggatgcc tgggttgtgg cgggtcatgc
    13141 gccggtgcgc tgcacggtgc aagcggggct gatgaacccg aagtataaag ttgaaattaa
    13201 gattgtggct gcggtgtaag ctttatcgaa gcaaaataag tcagacgata atttatcgat
    13261 aatactggtc ggttttacat aaatcgacca gagattaaga tattactgtt gatgctcctg
    13321 ctaattcatt atttattttt ataatttcaa ttttagctat aaagctaac
//
LOCUS       DADKRT010000116        13354 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.117, whole genome shotgun sequence.
ACCESSION   DADKRT010000116 DADKRT010000000
VERSION     DADKRT010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13354
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.117"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            414..1616
                     /locus_tag="JQ356_002831"
     CDS             414..1616
                     /locus_tag="JQ356_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     ATP-binding protein ProV"
                     /protein_id="HAY4622861.1"
                     /translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
                     KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
                     VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
                     YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
                     VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
                     KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
                     QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
                     DREGVNNG"
     gene            1609..2673
                     /gene="proW"
                     /locus_tag="JQ356_002832"
     CDS             1609..2673
                     /gene="proW"
                     /locus_tag="JQ356_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HAY4622862.1"
                     /translation="MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTP
                     APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQVLL
                     GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
                     VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNRRWYTTGPVGLLTRPFIK"
     gene            2731..3723
                     /gene="proX"
                     /locus_tag="JQ356_002833"
     CDS             2731..3723
                     /gene="proX"
                     /locus_tag="JQ356_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708493.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HAY4622863.1"
                     /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTLLASGDATFTAVNWTPLHDNMYEAAGGDKK
                     FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKEPKIAKLFDTNGDGKADLTGCNPG
                     WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
                     KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLF
                     AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAALK"
     gene            4015..5199
                     /locus_tag="JQ356_002834"
     CDS             4015..5199
                     /locus_tag="JQ356_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4622864.1"
                     /translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
                     ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRPRAL
                     LGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
                     HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDAR
                     NRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
                     AN"
     gene            5323..6060
                     /locus_tag="JQ356_002835"
     CDS             5323..6060
                     /locus_tag="JQ356_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HAY4622865.1"
                     /translation="MESPTPQPALGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
                     FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
                     QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
                     FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
                     VAILAGIVCGCLTALIQAFWQGAPDEL"
     gene            6050..6385
                     /gene="ygaH"
                     /locus_tag="JQ356_002836"
     CDS             6050..6385
                     /gene="ygaH"
                     /locus_tag="JQ356_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine transporter subunit YgaH"
                     /protein_id="HAY4622866.1"
                     /translation="MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLD
                     TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
                     LAWKVMAII"
     gene            complement(6404..6505)
                     /locus_tag="JQ356_002837"
     CDS             complement(6404..6505)
                     /locus_tag="JQ356_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622867.1"
                     /translation="MFNGRKRTIHLGMTSLISADIVTTVTNKVNVLF"
     gene            6476..7006
                     /gene="emrR"
                     /locus_tag="JQ356_002838"
     CDS             6476..7006
                     /gene="emrR"
                     /locus_tag="JQ356_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter EmrAB
                     transcriptional repressor EmrR"
                     /protein_id="HAY4622868.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
                     RLDQMEQDGVVLEAMS"
     gene            7133..8305
                     /gene="emrA"
                     /locus_tag="JQ356_002839"
     CDS             7133..8305
                     /gene="emrA"
                     /locus_tag="JQ356_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HAY4622869.1"
                     /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
                     VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE
                     KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
                     QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
                     DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP
                     LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTVREISLAPVNKLIDDIVKANAG"
     gene            8322..9860
                     /gene="emrB"
                     /locus_tag="JQ356_002840"
     CDS             8322..9860
                     /gene="emrB"
                     /locus_tag="JQ356_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HAY4622870.1"
                     /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWECGVSSSL
                     NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
                     MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
                     ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
                     RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
                     ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
                     EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
                     GGAH"
     gene            complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="JQ356_002841"
     CDS             complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="JQ356_002841"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HAY4622871.1"
                     /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
                     KEVMPERGSHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
                     LPKEKLQELHI"
     gene            complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="JQ356_002842"
     CDS             complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="JQ356_002842"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY4622872.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTQATTGH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCGDISGTDAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF
                     EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
                     IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
                     IGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGKAYQKVCDELVACFDNPDLTFSAR
                     ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMETADTE
                     PFAVWLEKHA"
     gene            complement(12218..12646)
                     /locus_tag="JQ356_002843"
     CDS             complement(12218..12646)
                     /locus_tag="JQ356_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY4622873.1"
                     /translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISYPWVLV
                     LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
                     LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
     gene            complement(12643..13209)
                     /gene="yqaB"
                     /locus_tag="JQ356_002844"
     CDS             complement(12643..13209)
                     /gene="yqaB"
                     /locus_tag="JQ356_002844"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
                     /protein_id="HAY4622874.1"
                     /translation="MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMI
                     ALNGSPTWRIAQAIIELNQADLAPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGR
                     RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT
                     QCVVFEDADFGIQAARAAGMDAVDVRLL"
BASE COUNT         3114 a         3490 c         3403 g         3347 t
ORIGIN      
        1 gctcctctta tgtgatgggg aaagcggttg aaacagaaga tgaagactgg aatttctgag
       61 ggtgttattt tcaaaaatat cactacccgc agcagggaaa taattcccgc caaatagctt
      121 tttatcacgc aaatattctg tagtgatcta cactgagact ctgttgcatt attcgcctga
      181 aactacaata ttcaggcgtt ttttcgctat ctatgacaaa aaatatcaac ttttctcgat
      241 ttgctctcag cccttatatc acgggaaatt ccggcgattt gctcgcatca atattcatgc
      301 cacatttgcc ctcaggggtt gcctcagatt ctcagtatgt tagggtagaa aaaagtgact
      361 atttccattg ggtaatatat cgacataaac aaataaagga atctttctat tgcatggcaa
      421 ttaaattaga aattaaaaat ctttataaaa tatttggcga gcatccacag cgagcgttca
      481 aatatatcga acaaggactt tcgaaagaac aaattctgga aaaaactggg ctatcgcttg
      541 gcgtaaaaga cgccagtctg gccattgaag aaggcgagat atttgtcatc atgggattat
      601 ccggctcggg taaatccaca atggtacgcc ttctcaatcg cctgattgaa cccacccgcg
      661 ggcaagtgct gattgatggt gtggatattg ccaaaatatc cgatgccgaa ctccgtgagg
      721 tgcgcagaaa aaagattgcg atggtcttcc agtcctttgc cttaatgccg catatgaccg
      781 tgctggacaa tactgcgttc ggtatggaat tggccggaat taatgccgaa gaacgccggg
      841 aaaaagccct tgatgcactg cgtcaggtcg ggctggaaaa ttatgcccac agctacccgg
      901 atgaactctc tggcgggatg cgtcaacgtg tgggattagc ccgcgcgtta gcgattaatc
      961 cggatatatt attaatggac gaagccttct cggcgctcga tccattaatt cgcaccgaga
     1021 tgcaggatga gctggtaaaa ttacaggcga aacatcagcg caccattgtc tttatttccc
     1081 acgatctcga tgaagctatg cgtattggcg accgaattgc cattatgcaa aatggtgaag
     1141 tggtacaggt cggcacaccg gatgaaattc tcaataatcc ggcgaatgat tatgtccgta
     1201 ccttcttccg tggcgttgat attagtcagg tattcagtgc gaaagatatt gcccgccgga
     1261 caccgaatgg cttaattcgt aaaacccctg gcttcggccc acgttcggca ctgaaattat
     1321 tgcaggatga agatcgcgaa tatggctacg ttatcgaacg cggtaataag tttgtcggcg
     1381 cagtttccat cgattcgctt aaaaccgcgt taacgcagca gcaaggtctt gatgcggcgc
     1441 tgattgatgc gccgttagca gtcgatgcac aaacgcctct tagcgagttg ctctctcatg
     1501 tcggacaggc accctgtgcg gtacccgtgg tcgacgagga ccaacagtat gtcggcatca
     1561 tttcgaaagg aatgctgctg cgcgctttag atcgtgaggg ggtaaataat ggctgatcaa
     1621 aataatccgt gggataccac gccagcggcg gacagtgccg tgcaatccgc agacgcctgg
     1681 ggtacaccgg cgactgcacc gactgacggc ggtggtgctg actggctgac cagtacgcct
     1741 gcgccaaacg tcgagcattt taatattctc gatccgttcc ataaaacgct gatcccgctc
     1801 gacagttggg tcactgaagg gatcgactgg gttgttaccc atttccgtcc cgtcttccag
     1861 ggcgtgcgcg ttccggttga ttatatcctc aacggtttcc agcaagtgct gctgggtatg
     1921 cccgcaccgg tggcgattat cgttttcgct ctcatcgcct ggcagatttc cggggtcgga
     1981 atgggcgtgg cgacgctggt ttcgctgatt gccatcggcg caatcggtgc ctggtcgcag
     2041 gccatggtta ccctggcgct ggtgttaacc gccctgctgt tctgtatcgt cattggtttg
     2101 ccgctgggga tctggctggc gagaagtccg cgagcggcga aaattattcg tccactgctt
     2161 gatgccatgc agaccacgcc agcgtttgtt tatctggtgc caatcgtcat gctatttggt
     2221 atcggtaacg tgccgggcgt ggtggtgacg atcatctttg ctctgccgcc gattatccgt
     2281 ctgaccattc tggggattaa ccaggttccg gcggatctga ttgaagcctc gcgctcattc
     2341 ggtgccagcc cgcgccagat gctgttcaaa gttcagttac cgctggcgat gccgagcatt
     2401 atggcgggcg ttaaccagac gctgatgctg gccctttcta tggtggtcat tgcctcgatg
     2461 attgccgtcg gcgggctggg tcagatggta cttcgcggta tcggtcgtct ggatatgggg
     2521 cttgccaccg ttggcggcgt cgggattgtg atcctcgcca ttatcctcga tcgcctgacg
     2581 caggccgttg ggcgcgactc acgcagtcgc ggcaaccgtc gctggtacac cactggccct
     2641 gttggtctgc tgacccgccc attcattaag taactctgca cttgcccggt gacgccgggc
     2701 attatcaccc tgccaaaaaa aggaataaca atgcgacata gcgtactttt tgcgacagcg
     2761 tttgccacgc ttatctctac acaaactttt gctgccgatc tgccgggcaa aggtattact
     2821 gttaatccag ttcaaagcac catcaccgaa gaaaccttcc agacgctgct ggtcagccgt
     2881 gcgctggaga aattaggcta taccgtcaac aaacccagcg aagtagatta caacgttggc
     2941 tacaccttgc ttgcttccgg cgatgcaacc ttcaccgccg tgaactggac gccactgcat
     3001 gacaacatgt acgaagctgc cggtggcgat aagaaatttt atcgtgaagg ggtatttgtt
     3061 aacggcgcgg cacagggtta cctgatcgat aagaaaaccg ccgaccagta caaaatcacc
     3121 aacatcgcac aactgaaaga gccgaagatc gccaaactgt tcgataccaa cggcgacggt
     3181 aaagcggatt taaccggttg taatcctggc tggggctgcg aaggtgcgat caaccaccag
     3241 cttgccgcgt atgaactgac caacaccgtg acgcataatc aggggaacta cgcagcgatg
     3301 atggccgaca ccatcagtcg ctacaaagag ggcaaaccgg tgttttatta cacctggacg
     3361 ccgtactggg tgagtaatga gctgaagcca gggaaagatg tggtctggtt gcaggtgccg
     3421 ttctccgcac tgccgggcga taaaaatgcc gataccaaac tgccgaatgg cgcgaattac
     3481 ggcttcccgg tcagcaccat gcatatcgtt gccaacaaag cctggaccga gaaaaatccg
     3541 gcggcagcca aactgtttgc cattatgcag ttgccagtgg ccgatattaa cgcccagaac
     3601 gccattatgc atgacggcaa agcctcagaa ggcgatattc agggccacgt tgatggctgg
     3661 atcaaagccc accagcagca gttcgatggc tgggtgaatg aggcgctggc agcgctgaag
     3721 taatttttat tcaggcggat aaggcgtttt tgccttatcc gccgctctgt acacaatgcc
     3781 tgatgcgacg ctgacgcgtc ttatcatgcc tacaaaatac actcattccg tatggcggat
     3841 aaggcgtttt cgccgcatcc gccgttctgt gcacaatgcc tgatgcgacg ctggcgcgtc
     3901 ttatcatgcc tacaaaccac atcgcacatt tcaacaagct atctttcatc ccatattcat
     3961 caacatccgc tattattgat ttccagctta atcatcacct gatgaacaaa aataatgact
     4021 aaacctaatc atgagcttag cccggcgctg atcgtgctga tgtctatcgc caccggtctg
     4081 gcggtagcca gtaactatta cgcccagcca ttgctcgaca ccatcgcgcg taacttttcc
     4141 ctttccgcca gttcggcagg ctttattgtt accgccgcgc aattgggcta tgcagcaggt
     4201 ctgctgtttc ttgttcccct cggtgatatg tttgaacgcc gccgcctgat tgtctcgatg
     4261 accttactgg cggcaggcgg catgttaatc actgccagca gtcagtcgct ggcgatgatg
     4321 atcctcggta cggcattaac cggtttattc tctgtcgtgg cacaaattct ggttccgctg
     4381 gcagcgacgc tggcttcacc ggacaaacgc ggcaaagtgg ttggcactat tatgagcggt
     4441 ctgctgttgg ggatcttact cgcacggacc gttgccggat tgctggcgaa tctcggcggc
     4501 tggcgcaccg tcttttgggt tgcctcggtg ttaatggcac tgatggcgct ggcattatgg
     4561 cgtggtctgc cacaaatgaa atcagaaacc cacctcaact acccacagtt gttaggttcc
     4621 gttttcagca tgtttatcag cgataagatc ctgcgccccc gcgcattgct gggctgcctg
     4681 acctttgcca acttcagcat tctctggacc tcaatggcct ttttgcttgc cgctccacct
     4741 tttaactaca gcgatggtgt cattggtctg tttggacttg cgggagctgc cggagcgttg
     4801 ggcgctcgtc cggcgggcgg ttttgccgat aagggtaaat cgcaccacac cacaactttc
     4861 ggtctgctgc tgctattact ttcatggctg gcgatctggt ttggtcacac ttccgtactg
     4921 gcgctgatta tcggcatcct ggtgctggat ctcaccgtac agggcgtgca tatcactaac
     4981 cagacggtaa tttatcgaat acaccctgat gcgcgtaatc gcctgaccgc aggttacatg
     5041 accagctact ttattggcgg tgccgccggt tcgctaattt cagcctcagc ctggcaacat
     5101 ggcggttggg ctggcgtttg tctggctggc gcgacgattg ccctggttaa cttactggtc
     5161 tggtggcgag gttttcatcg tcaggaagcc gcaaattaag caatcagcaa ccgttttcgt
     5221 ggctttacac ttataagggt gttaagaagc ccatcagtct gataaggtta agatattcat
     5281 tcagtctatt tataatatta acaatcgtta agcgtacact ctatggaaag ccctactcca
     5341 cagcctgctc ttggttcggc gaccttcatg gaaggatgca aagacagttt accgattgtt
     5401 attagttata ttccggtggc ctttgcgttc ggtctgaatg cgacccgtct gggattctct
     5461 cctctcgaaa gcgttttttt ctcctgcatc atttatgcag gcgcgagcca gttcgtcatt
     5521 accgcgatgc tggcagccgg gagtagtttg tgggttgctg cactgaccgt catggcaatg
     5581 gatgttcgcc atgtgttgta tggcccgtca ctgcgtagcc gtattattca gcgtctgcaa
     5641 aaatcgaaaa ccgccctgtg ggcatttggc ctgacggatg aggtttttgc cgccgcaacc
     5701 gcaaaactgg tacgcaataa tcgccgctgg agcgagaact ggatgatcgg cattgccttc
     5761 agttcatggt catcgtgggt atttggtacg gtaatagggg cattctccgg cagcggcttg
     5821 ctgcaaggtt atcccgccgt tgaagctgca ttaggtttta tgcttccggc actctttatg
     5881 agtttcctgc tcgcctcttt ccagcgcaaa caatctcttt gcgttaccgc agcgttagtt
     5941 ggtgcccttg caggcgtaac gctattttct attcccgtcg ccattctggc aggcattgtc
     6001 tgtggctgcc tcactgcgtt aatccaggca ttctggcaag gagcgcccga tgagctatga
     6061 ggttctgctg cttgggttac tggttggcgt ggcgaattat tgcttccgct atttgccgct
     6121 gcgcctgcgt gtgggtaatg cccgcccaac caaacgtggc gcggtaggta ttttgctcga
     6181 caccattggc atcgcctcga tatgcgctct gctggttgtc tctaccgcac cagaagtgat
     6241 gcacgataca cgccgtttcg tgcccacgct ggtcggcttc gcggtactgg gtgccagttt
     6301 ctataaaaca cgcagcatta tcatcccaac actgcttagt gcgctggcct atgggctcgc
     6361 ctggaaagtg atggcgatta tataacccac aagaatcatt tttctaaaac aatacattta
     6421 ctttatttgt tactgtcgtt actatatcgg ctgaaattaa tgaggtcata cccaaatgga
     6481 tagttcgttt acgcccattg aacaaatgct aaaatttcgc gccagccgcc acgaagattt
     6541 tccttatcag gagatccttc tgactcgtct ttgcatgcac atgcaaagca agctgctgga
     6601 gaaccgcaat aaaatgctga aggctcaggg gattaacgag acgttgttta tggcgttgat
     6661 tacgctggag tctcaggaaa accacagtat tcagccttct gaattaagtt gtgctcttgg
     6721 atcatcccgt accaacgcga cgcgtattgc cgatgaactg gaaaaacgcg gttggatcga
     6781 acgtcgtgaa agcgataacg atcgccgctg cctgcatctg caattaacgg aaaaaggtca
     6841 cgagtttttg cgcgaggttt taccaccgca gcataactgc ctgcatcaac tctggtccgc
     6901 gctcagcaca acagaaaaag atcagctcga gcaaatcacc cgcaaattgc tctcccgtct
     6961 cgaccagatg gaacaagacg gtgtggttct cgaagcgatg agctaacgcg tcatctcgct
     7021 caaaaatcca gatttataaa agaaaaaatg accggccagc atcgcaacat gctggccttt
     7081 ttggcaagca ggtcggctca gccgatgagt taagaagatc gtggagaaca atatgagcgc
     7141 aaatgcggag actcaaaccc cgcagcaacc ggtaaagaag agcggcaaac gtaagcgtct
     7201 gctcctcctt ctcaccttgc tctttataat tattgccgta gcgataggga tttattggtt
     7261 tttggtactg cgtcatttcg aagaaaccga tgacgcatac gtggcaggga atcagattca
     7321 aattatgtct caggtgtctg gcagcgtgac gaaagtctgg gccgataaca ccgattttgt
     7381 aaaagaaggc gatgttctgg tcactctcga cccgacagat gctcgccagg cgtttgaaaa
     7441 agccaaaact gcactggctt ccagcgttcg ccaaacccac cagctgatga ttaacagcaa
     7501 acagttacag gcgaatattg aggtgcaaaa aatcgccctc gcgaaagcac aaagcgacta
     7561 caaccgccgt gtgccgctgg gcaatgccaa cctgattggt cgcgaagagc tgcaacacgc
     7621 ccgcgacgcc gtcaccagtg cccaggcgca actggacgtc gctattcaac aatacaatgc
     7681 caatcaggcg atgattctgg ggactaaact ggaagatcag cctgccgtgc aacaggctgc
     7741 caccgaagta cgtaacgcct ggctggcgct ggagcgtacc cgtattgtca gtccgatgac
     7801 cggttatgtc tcccgccgcg cggtacagcc tggggcgcaa attagcccaa cgacgccgct
     7861 gatggcggtc gttccagcca ccaatatgtg ggtggatgcc aactttaaag agacgcagat
     7921 tgccaatatg cgtatcggtc agccggtcac tatcaccacg gatatttacg gcgatgatgt
     7981 gaaatacacc ggtaaagtgg ttggtctgga tatgggcaca ggtagcgcat tctcactgct
     8041 tccggcgcaa aatgcgaccg gtaactggat caaagtcgtt cagcgtctac ctgtgcgtat
     8101 cgaactggac cagaaacagc tggagcaata cccgctgcgc attggtttgt ccacgctggt
     8161 gagcgtcaat accactaacc gtgacggtca ggtactggca aataaagtac gttcaacacc
     8221 ggtcgcggta agtaccgtgc gtgaaatcag cctggcacct gtcaataaac tgatcgacga
     8281 tatcgtaaaa gctaacgctg gctaatccag aggtgcgtgt gatgcaacag caaaaaccgc
     8341 tggaaggcgc gcaactggtc attatgacga ttgcgctgtc actggcgaca ttcatgcagg
     8401 tgctggactc caccattgct aacgtggcga tccccactat cgccgggaat ctgggctcat
     8461 cgctcagcca gggaacgtgg gtaatcactt ctttcggggt ggcgaatgcc atctcgatcc
     8521 cgcttaccgg ctggctggca aagcgcgtcg gggaagtgaa actgttcctt tggtccacca
     8581 tcgcctttgc tattgcgtcg tgggagtgtg gtgtctccag cagcctgaat atgctgatct
     8641 tcttccgtgt gattcagggg attgtcgctg ggccgttgat cccactttcg caaagtcttt
     8701 tgctgaataa ttacccgcca gccaaacgct caatcgcgct ggcgttgtgg tcgatgacgg
     8761 tgattgtcgc gccaatttgc ggcccaatcc tcggcggtta tatcagcgat aattaccact
     8821 ggggctggat attcttcatc aacgtgccaa ttggcgtggc ggtggtgttg atgacactgc
     8881 aaaccctgcg cggacgcgaa acccgcaccg aacggcggcg gattgatgcc gtggggctgg
     8941 cactgctggt tattggtatc ggtagcctgc agattatgct cgaccgcggt aaagagctgg
     9001 actggttttc atcacaggaa attatcattc ttaccgtggt ggcggtggtg gctatctgct
     9061 tcctgattgt ctgggagctg accgacgata acccgatagt cgatctgtcg ttgtttaagt
     9121 cgcgcaactt caccatcggc tgcttgtgta tcagcctcgc gtatatgctc tacttcggcg
     9181 cgattgttct gctgccgcag ttgttgcagg aggtctacgg ttacacggcg acctgggcag
     9241 gtttggcctc tgcgccggta gggattattc cggtgatcct gtcgccgatt atcggccgct
     9301 tcgcgcataa actggatatg cggcggctgg taaccttcag ctttattatg tatgccgtct
     9361 gcttctactg gcgtgcctat acctttgaac caggtatgga ttttggcgcg tcggcctggc
     9421 cgcagtttat ccaggggttt gcggtggcct gcttctttat gccgctgacc accattacgc
     9481 tgtctggttt gccaccggaa cgactggcgg cggcatcgag cctctctaac tttacgcgaa
     9541 cgctggcggg gtctatcggc acgtcgataa ccacgaccat gtggaccaac cgcgagtcga
     9601 tgcaccatgc gcagttgact gagtcggtaa acccgttcaa cccgaatgcc caggcgatgt
     9661 acagtcaact ggaagggctt gggatgacgc aacagcaggc atcaggctgg attgcccagc
     9721 agatcactaa tcaggggctg attatttccg ccaatgagat cttctggatg tcagccggga
     9781 tattcctcgt cctgctgggg ctggtgtggt ttgctaaacc gccctttggc gcaggtggcg
     9841 gcggaggtgg tgcgcactaa gtacaactaa gccagttcat ttgaactggc ttttttcaat
     9901 taattgtgaa gatagtttac tgactaaatg tgcagttcct gcaacttctc tttcggcagt
     9961 gccagttctt cgttgctgtt gatgcgtacg tcacgttcca gaatgctacg cgcaatatcc
    10021 tgcgcttcct gcaacgagtg catctggtaa gtgccacact ggtagacgtt cagctccggg
    10081 atctgattct gatcctgcac tttcagcacg tcttccattg ccgctttcca ggcatcagca
    10141 acacgctgct catctggcgt accaatcaga ctcatataaa aaccggtgcg gcagcccatt
    10201 ggcgagatat cgataatctc tacaccatta ccgttaagat ggttacgcat aaaaccagca
    10261 aacaggtgct ccagagtatg gctccctctt tctggcatca cttctttgtt cggcacgcag
    10321 aagcgcagat cgaacacggt gattgcgtcg ccatgcgggg tgttcattgt tttcgccacc
    10381 cgaactgcag gcgcttccat ccgggtatga tcgactgtga agctatctaa caacggcatt
    10441 tagccacctc cggtaatttt tttaaaaatt ttctgaactc tttcttccca ggcgagtctg
    10501 agtatatgaa agacgcgcat ttgttatcat catccctgaa ttcagagatg aaattttggc
    10561 cactcacgag tggccttttt cttttctgtc aggcgtgttt ttccagccac accgcaaacg
    10621 gttcggtatc agcggtttcc atttcctgct gacggcgttc agatgcctcg cgctcggcta
    10681 caaaatcctc ttcgcgcaga atttccaacg gctcttcacg cagcagatta cggtaggctt
    10741 ctgcaaacgc tttgcctgtt ccgccaatac cagtatcaat catagacctt aagatacggg
    10801 cagagaaagt cagatcggga ttatcgaagc aggcgaccag ttcatcacac actttctgat
    10861 acgctttgcc gccgttaatg ctatccaacg tttgcgcgac gcgtttcaga tcgcggaaca
    10921 gatctttacc cacctgcggt aacgggaact gcgcggtttc gcagccgata cccagcgtca
    10981 ggcccggttt gcgaccttcg aggatcaccc ggttccagtt aacgcgtgta caggcaagtt
    11041 cgctactgct catttccggt gcatcagcca gcgcacacca gaccataaac aggtcgagga
    11101 atcgcacctg ctgttcatct acaccaatcg gcgagaacgg gttgatgtcc agcgaacgca
    11161 cttcaatata ttcaatgccg ccacgtaaca gcgcatcaga aggtgactcg ccgctgcggg
    11221 taacgcgttt tggacgaatc ggcgcataca gttcgttttc aatctgcagc acgttgctat
    11281 tgatttgcag cctcttaccg tctttctcaa taccaatctt cgcgtactct tccgatggcg
    11341 ttttgattgc ctgtttaagg cccgctacgt actcgtaaag atcgttgaag gtaataccaa
    11401 gattgctttg cgatttattg gtatagccga gatcgctcaa acgaagagag gtcgcatacg
    11461 gcaggtaata cataccgcac tcggttttct caaacggcag cgacgttggt tttccttgca
    11521 ggaaagaaga acaaatcgcc ggagatgcac caaacagata aggaatgacc caaccgaaac
    11581 gatagtaatt gcggataacg cggaaatagc ccgcagaaat tttctctttg gcatcagtgc
    11641 ccgagatatc accgcacttc gcttgccaga atgccattgg caaagagaaa ttgtagtgca
    11701 cgccggaaat ggtttgcatc agcgcgccgt agcgattttt cagcccttca cgatacagcg
    11761 ttttaaagcg tccggtgtta gaagtgccgt actgtgccag ttcgatgtcc tgaccttctg
    11821 cgatgtagca tggcatactt aacggccaca tccgctcatc gcccatattg cgcgccgtat
    11881 aacgatgcag atcgcgcata aaggtcaaca tatgttcaat atcaccatcc actggtgtaa
    11941 tgaattccag caatgcttcc gcaaaatcgg tagtaatcca tttgtgcgtc agtgcggaac
    12001 ctaatgcttc aggatgacct gttgttgcct gtgtgccatc agcattaaca cgcaaagttt
    12061 cgcgctccag cccacgctgt atccccttta acgcctgagg atgtttttcc agccaggcca
    12121 gcgcctgtga tacgtccggg atcaaattga cctcccgcct gtcaaaatcg ttttaattag
    12181 cataactgta atggtgacca tatgtgcagg cctacaatta gtgccaccac atcatgccct
    12241 gaacggtagc tgctgcaact gcaacatagc gtaaagcttt accaaggcac aaaaaaaaga
    12301 ttaccggtcc ccacgagatg cgcatccatc ccgctaacag acacagtaaa tcgccaacca
    12361 cgggcatcca gcttaataat agcgtgactg caccatagcg tttcagccag ccagtagctt
    12421 tctcttgcca gcgcgatgtt ttacgcaatg gaaagaaacg cccaaggata acgttagtta
    12481 accctccaag gctattaccc attgttgctg ttaaaactaa aacccaggga taactgatcc
    12541 cggaaagcaa cattgccacc agcacgactt cggagttgcc gggtaatagt gtagcgctga
    12601 gaaaactact ggcaaacaac gagaaaagcg ataacgcttc actcacagca agcgaacatc
    12661 cacggcgtcc atgcctgctg cacgggccgc ctgaataccg aaatcggcat cttcaaagac
    12721 cacacactgc gtcggttgca cgcccatacg ctgcgcgcac aacaaaaatg tgtctggcgc
    12781 gggtttatgg tgtttgacgt gatcagcagc gacgacggcg tcaaaataac ggcgtaatcc
    12841 caggtgcgcc agcaatgcct cagcgatggc gctttcactc cccgttccta cagccattgg
    12901 gcgacgacca tgccaacttt tcaccacttc aacaagagga agcggctcga cactatccag
    12961 cagcatactt cttactgctt ctgttttttc acgcgctaac gcatgcgggg cgagatcggc
    13021 ctgattcagc tcaataattg cctgagcaat acgccaggtg ggcgatccat taagcgcaat
    13081 cattgcctga acatcgtact gaagaccgta gtgccctaat acttcgcgcc acgctttacg
    13141 gtgcgtaggc tccgtatcca ggattgtgcc atccatatca aaaattaaac ctgcataacg
    13201 ctcgtacatg gtcttctcgc aagtcgaaaa atatgacgct actttagcgt aattgcttga
    13261 ttttgtcgct gatggcgaag gagaagaaaa ttcaggaaat ggataaagta gttatttaga
    13321 aatgagatat ttttgaagga aatttttggg agaa
//
LOCUS       DADKRT010000117        13329 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.118, whole genome shotgun sequence.
ACCESSION   DADKRT010000117 DADKRT010000000
VERSION     DADKRT010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13329
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.118"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..309
                     /locus_tag="JQ356_002845"
     CDS             <1..309
                     /locus_tag="JQ356_002845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622875.1"
                     /translation="VVLNGKINGNACIVVPLSTTRDHDKLNRGMHVEIASNVINGLQF
                     FDQQIRWAKADLVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAILLIN
                     "
     gene            508..789
                     /gene="ppiC"
                     /locus_tag="JQ356_002846"
     CDS             508..789
                     /gene="ppiC"
                     /locus_tag="JQ356_002846"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004097481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HAY4622876.1"
                     /translation="MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSG
                     KRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
     gene            complement(876..2351)
                     /gene="ilvC"
                     /locus_tag="JQ356_002847"
     CDS             complement(876..2351)
                     /gene="ilvC"
                     /locus_tag="JQ356_002847"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HAY4622877.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPE
                     GAVDNAQLRDVNEAIRCHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            2501..3391
                     /gene="ilvY"
                     /locus_tag="JQ356_002848"
     CDS             2501..3391
                     /gene="ilvY"
                     /locus_tag="JQ356_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HAY4622878.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
                     QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSSEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPM
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
                     QKKRLHEPLIEAFWKILPNH"
     gene            complement(3388..4932)
                     /gene="ilvA"
                     /locus_tag="JQ356_002849"
     CDS             complement(3388..4932)
                     /gene="ilvA"
                     /locus_tag="JQ356_002849"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HAY4622879.1"
                     /translation="MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHILSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRAVTEFNYRFADAKNACIFVGVRLSRGLEER
                     KEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRF
                     LNTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAF
                     RFFLAG"
     gene            complement(4935..6785)
                     /gene="ilvD"
                     /locus_tag="JQ356_002850"
     CDS             complement(4935..6785)
                     /gene="ilvD"
                     /locus_tag="JQ356_002850"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HAY4622880.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIG
                     ILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFS
                     QDCRWDTLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELA
                     ARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(6850..7779)
                     /gene="ilvE"
                     /locus_tag="JQ356_002851"
     CDS             complement(6850..7779)
                     /gene="ilvE"
                     /locus_tag="JQ356_002851"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HAY4622881.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIF
                     VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ"
     gene            complement(7799..8062)
                     /gene="ilvM"
                     /locus_tag="JQ356_002852"
     CDS             complement(7799..8062)
                     /gene="ilvM"
                     /locus_tag="JQ356_002852"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HAY4622882.1"
                     /translation="MMQYQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQN
                     INIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA"
     gene            complement(8059..9705)
                     /locus_tag="JQ356_002853"
     CDS             complement(8059..9705)
                     /locus_tag="JQ356_002853"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HAY4622883.1"
                     /translation="MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKD
                     IQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE
                     FLATTKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDR
                     VTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPELQQPLNINDWQQYC
                     AQLRDEHAWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(9708..9758)
                     /locus_tag="JQ356_002854"
     CDS             complement(9708..9758)
                     /locus_tag="JQ356_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622884.1"
                     /translation="MNNSTKFCFSTFSTGN"
     gene            complement(9845..9943)
                     /gene="ilvL"
                     /locus_tag="JQ356_002855"
     CDS             complement(9845..9943)
                     /gene="ilvL"
                     /locus_tag="JQ356_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HAY4622885.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
     gene            10295..11815
                     /locus_tag="JQ356_002856"
                     /pseudo
     CDS             10295..11815
                     /locus_tag="JQ356_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418214.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
     gene            complement(11840..12178)
                     /gene="maoP"
                     /locus_tag="JQ356_002857"
     CDS             complement(11840..12178)
                     /gene="maoP"
                     /locus_tag="JQ356_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HAY4622886.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNE
                     LDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTDSDD"
     gene            12297..13136
                     /gene="hdfR"
                     /locus_tag="JQ356_002858"
     CDS             12297..13136
                     /gene="hdfR"
                     /locus_tag="JQ356_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HAY4622887.1"
                     /translation="MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLG
                     VNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWEC
                     MLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQL
                     LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQ
                     IAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLD
                     EVY"
     gene            complement(13232..13307)
                     /locus_tag="JQ356_002859"
     tRNA            complement(13232..13307)
                     /locus_tag="JQ356_002859"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13272..13274),aa:Trp,seq:cca)
BASE COUNT         3094 a         3604 c         3458 g         3173 t
ORIGIN      
        1 gtcgtgctca acggaaaaat taatggcaac gcatgtatcg tcgttccatt atcaaccact
       61 cgcgatcatg acaagttaaa tcgtggaatg catgttgaaa tagccagtaa tgttatcaat
      121 ggcctgcaat tctttgatca gcagattcgt tgggccaaag ccgacctggt acaacaagtc
      181 agtcgaaacc gattaaatag agcaaggact tacagagggt atcttaatca atgtttgcca
      241 catgagttgg ttgcagacat acagagggcg gtcatcaagt caatcaatgc catattgctc
      301 ataaattgac aataaaataa ccatccccga taatgacttt gtagcccata gaggccctaa
      361 gttttctccc cttgagggac ctgcgaagcc cggattttcc gggcttttgc catatatgta
      421 ccagcccctc cctgactgac aattacgtta gcatctgcgg atcatgctaa aatcgccgcc
      481 tgacaattat tcactcaagg cacgatcatg gcaaaaacag cagcagcact gcatatcctt
      541 gtaaaagaag agaaactggc tctggatctt ctcgagcaga ttaagaacgg tgccgatttc
      601 ggcaagctgg cgaagaaaca ctccatttgc ccatcaggca aacgcggcgg tgatttaggt
      661 gaattccgcc agggtcagat ggttccggcg ttcgataaag ttgtgttctc ttgtccggta
      721 ctggagccga ccggcccgct gcacacccag ttcggttacc acatcattaa ggtgctgtac
      781 cgtaactaat agcaaggcct tctccaggag aaggccttga gtgttttctc cctctccctg
      841 tgggagaggg tcggggtgag ggcatcagcg cgcacttaac ccgcaactgc aatacgtttc
      901 atatccgtca tatagccgcg cagtttctta cctacctgct caatcgcatg gcagcgaatc
      961 gcttcgttca catcacgcag ttgcgcgtta tctaccgcac cttccggaat agctttaccc
     1021 agatcgcccg gttgcagctc tgccataaac ggtttcagca acggcacaca agcgtaagag
     1081 aacagatagt taccgtactc agcggtatca gagataacca cgttcatttc gtacagacgc
     1141 ttacgggcga tggtgttggc aatcagcggc agctcgtgca gtgattcata atatgcagac
     1201 tcttcaatga tgccggaatc gaccatggtt tcaaacgcca gctcaacgcc cgctttcacc
     1261 atcgcgatca tcagtacgcc tttatcgaag tactcctgct cgccgatttt gccttcatac
     1321 tgcggcgcgg tttcgaaggc ggttttgccg gtctcttcac gccaggtcag cagtttctta
     1381 tcatcgttgg cccagtccgc catcataccg gaggagaatt cgccggagat gatgtcgtcc
     1441 atatgtttct ggaacagggg tgccatgatc tctttcagct gttcagacag cgcgtaagca
     1501 cgcagtttcg ccgggttaga gagacggtcc atcatcaggg tgatgccgcc ctgcttcagc
     1561 gcttcggtga tggtttccca accgaactga attagttttt ctgcgtatgc cggatcggtg
     1621 ccctcttcca ccagcttgtc gaagcacagc agcgagccag cctgcaacat accgcacagg
     1681 atggtttgct cacccatcag gtcagatttc acttccgcaa cgaaggacga ttccagcacg
     1741 cccgcacggt gaccaccggt tgctgccgcc catgctttag cgatcgccat gccttcgcct
     1801 ttcggatcgt tttccgggtg aacggcaatc agcgtcggta cgccgaatcc acgtttgtac
     1861 tcttcacgca cttcggtgcc agggcatttc ggcgcaacca tgactacggt gatgtcttta
     1921 cggatctgct cgcccacttc gacgatgttg aaaccgtgcg agtaacccag cgccgcgccg
     1981 tctttcatca gtggctgtac ggtgcgcact acgtcggagt gctgcttgtc tggcgtcagg
     2041 ttaaccacca aatccgcctg cgggatcagt tcttcgtaag tgcccacttt aaaaccgttt
     2101 tcggtcgctt tacgccagga tgcgcgcttc tcggcaatcg cttctttacg cagagcgtag
     2161 gagatatcga gaccagaatc acgcatgttc aggccctggt tcagcccctg tgcgccacag
     2221 ccgacgataa ccactttttt accctgaagg tagctcgcgc cgtcggcgaa ttcgtcgcgc
     2281 cccataaagc gacatttgcc cagctgtgcc agctgctggc gcaggttcag tgtattgaag
     2341 tagttagcca tggtgattcc tcgtgatgtt gtgcttctta ttgttcggtt cgcgtttgcg
     2401 agattgaatt cactatatga caggaaattt attgcggaaa ttgatatatt cacaacgtca
     2461 cattgcaatt tctgcaacgt caacattgag ggctgctcca ttggatttac gcgatctgaa
     2521 aaccttcctg catctggcgg aaagccgcca ttttggccgc agcgcgcggg cgatgcacgt
     2581 tagcccatcc acgctctcac ggcagattca gcgcctggaa gaagatcttg gtcagccgct
     2641 atttgtgcgc gataaccgca cggtgacgct gactgaagcg ggcgaagagc tgcgcgtttt
     2701 cgcccagcaa acgctgttgc agtatcagca gttgcgccac accatcgatc agcaagggcc
     2761 gtcgctctct ggcgaattac atatcttctg ctcggtgacc gctgcctaca gccatctgcc
     2821 accgattctc gaccgcttcc gcgcggaaca cccgtcggtg gagatcaaac taaccactgg
     2881 tgatgcggca gatgcgatgg aaaaggtagt cactggcgaa gcggatctgg cgattgccgg
     2941 gaaaccggag actctgcccg gcgcagtggc gttttcgatg ctggagaatc tggcagtagt
     3001 gctgattgcg cccgcgctgc cctgcccggt gcgtaaccag gtttcgtcag agaagccgga
     3061 ctggtctaca gtgccgttta tcatggccga tcagggaccg gtacgccgcc gcattgaact
     3121 gtggtttcga cgcaataaaa tcagcaaccc gatgatttac gccacggttg gcgggcatga
     3181 agcgatggta tcgatggtgg cgctcggctg tggcgtggcg ctgttgccgg aagtagtgct
     3241 ggaaaacagc cccgaaccgg tgcgtaaccg cgtgatgatt ttagagcgca gcgatgaaaa
     3301 aacgccgttt gaactgggcg tttgtgcgca gaaaaagcgg ctgcatgagc cgctgattga
     3361 ggcgttctgg aagattttgc cgaaccatta acccgccaaa aagaacctga acgccggatt
     3421 attggtttcg tcgtggcaat cgtagcccag ctcatttagc cgggtttcga aatccggttc
     3481 atggtcgccg agttcgaacg ccgccagtac gcgcccgtag tcggtgccat ggctgcgata
     3541 gtggaacaaa gaaatgttcc agtgcgtacc cagcgtgttg aggaagcgca gcagcgcgcc
     3601 cggtgattcc gggaattcga agctgtagag gcgttcctgc aacggatgtg acggacgccc
     3661 gccgaccata tagcgcacat gcaacttcgc catttcgtcg tcggagagat ccaccacgct
     3721 gtagccgccg tcgttgagca tctgcaaaat ttctttgcgc tcttcgaggc cgcggctcag
     3781 gcgcacgccg acaaagatgc aggcgttttt ggcatcggca aaacggtagt tgaactcggt
     3841 gaccgctcgc ccgccaagca gttggcagaa tttgaggaag ctgccttttt cttccggaat
     3901 ggtcaccgcc aacaacgctt cacgctgttc gcccagttcg cagcgttccg agacgtagcg
     3961 caggccgtgg aagttcacgt tggcaccgga aagaatatgc gccagccgtt cgccgcgaat
     4021 gttgtgctgg gcgatatatt ttttcattcc cgccagcgcc agcgcgccag agggttccgc
     4081 caccgcgcgc acatcttcga ataaatcctt catcgccgca cagatcgcat cactatcgac
     4141 ggtgatgatg tcgtcgagat actcctggca taaacggaag gtttcgtcac cgatgcgttt
     4201 taccgctacg ccttcagcaa atagccctac gcgcggcaga tcaaccggat gacccgcatc
     4261 cagcgctgct ttcaggcagg cggagtcttc cgcttctacg gcgatcactt tgatttgtgg
     4321 catcagttgt ttgatcagca ccgcaacgcc cgccgccaga ccgccgccgc cgactggcac
     4381 aaatacgcgg tcgagatggg cgtcctgctg gagcagttcc agcgccagcg tgccttgccc
     4441 ggcaatcacc atcggatggt cgaacggcgg cacccaggtg aacccctgct gctgtgacag
     4501 ttcgatcgct ttagctttcg cttcgtcaaa gttcgcgcca tgaagcagca cttcgccgcc
     4561 gaatccacgt accgcatcga ctttgatgtc ggcggtggcg gttggcataa cgatcagggc
     4621 cttcacgcct aaccgcgcag aagaaaacgc gacgccctgc gcgtggttac ccgcagaagc
     4681 agtgatcacg ccgtgcgctt tttgttcttc cgtcaggccc gccatcatgg cgtatgcgcc
     4741 gcgcagctta aagctgtgca ctggctggcg atcttcgcgc ttcaccagaa tgacgttatc
     4801 aagacgcgac gacagttttt ccattttttg tagcggcgta acctgcgctg cctcgtaaac
     4861 cggcgcgcgc agcactgctc ttaaatattc ggcaccttcc ggagcaccag acaggggttg
     4921 cgagtcagcc attattaacc ccccagtttc gatttatcgc gcaccgcacc tttgtcggcg
     4981 ctggttgcca ggctggcgta ggcgcgcagg gcaaaggaaa cctgacgttc acggtttttc
     5041 ggcgtccagg ctttgtcacc ccgagcttcc tgcgcttcac gacgcgccgc cagttcggca
     5101 tcgcttacct gtaactgaat gccacggttc gggatgtcga tagcgatcag gtcaccatct
     5161 tcaatcagac caatgctgcc gccgcttgcc gcttccggtg agacgtggcc gatggaaaga
     5221 ccagaggtgc cgccagagaa acgaccgtcg gtgatcagcg cacaggcttt accgagaccc
     5281 attgatttca ggaagctggt tgggtagagc atttcctgca tgccagggcc gcctttcggg
     5341 ccttcatagc ggatcaccac cacatcgccc gcgacaactt tgccaccgag gatcgcttct
     5401 accgcgtcgt cctggctttc gtacactttt gccgggccgg tgaatttgag gatgctgtca
     5461 tcgacgcccg cggttttcac gatgcagccg ttttcagcaa aattaccgta gagcaccgcc
     5521 aggccgccgt ctttgctgta ggcgtgttcc agcgagcgga tacagccgtt tgcgcgatcg
     5581 tcgtccagcg tatcccaacg gcaatcttgc gagaatgcct gggtggtacg gatacccgca
     5641 gggccggcgc ggaacatatt ttttaccgcg tcatcctggg tcagcataac gtcgtattgc
     5701 tccagcgttt gcggcaacgt caggccgagc acgtttttca catcacggtt cagtaacccc
     5761 gcgcgatcca gttcgccgag aataccgata acaccaccag cacggtgaac atcttccata
     5821 tggtatttct gggtgctcgg cgcaacttta cacagctgtg gaaccttgcg ggaaagctta
     5881 tcgatatcac tcatggtgaa gtcgatttcc gcttcctgcg ccgccgccag caggtgaagt
     5941 acggtgttag tcgatccacc catcgcgata tccagcgtca tggcgttttc aaacgccgcc
     6001 ttactggcga tattacgcgg cagtgcactt tcgtcgtttt gctcgtaata acgtttggtc
     6061 aattcaacaa tgcgtttacc agcattaagg aacagctgct tacggtccgc gtgggttgcc
     6121 agcagcgagc cgttgcctgg ctgcgacaaa cccagcgctt cggtcaggca gttcattgag
     6181 ttagcggtaa acatcccgga gcaggaaccg caggttgggc aggcggaacg ttcaacctga
     6241 tcgctctggg agtcagaaac tttcgggtct gcgccctgga tcatcgcatc aaccagatcg
     6301 agtttgatta tctgatcgga cagtttggtt ttcccggcct ccatcgggcc gccggaaaca
     6361 aagatcaccg gaatattcag gcgcagggaa gccatcagca tccccggggt gattttgtcg
     6421 cagttagaga tgcagaccat ggcgtcggcg cagtgggcgt tgaccatata ctcaacggaa
     6481 tcagcgatca gttcgcgaga tggaagtgaa taaagcatcc ccccgtggcc catggcaatc
     6541 ccatcatcca ccgcaatggt gttgaactct ttggcaacgc cgccagccgc ttcaatttgt
     6601 tcggcgacca gtttaccgag atcgcgcaga tggacgtgac ccggtacaaa ttgggtgaac
     6661 gagttcacaa ccgcgataat cggcttgcca aaatcggcgt cggtcattcc ggtggcgcgc
     6721 cacagcgcac gagcacccgc catattacga ccatgagtgg tggtggcgga acggtactta
     6781 ggcatacttt atttactccc agtgtctgtc tcgtaaatgg gacggtgcgt gccgtcccat
     6841 tttttgtatt tattgattaa cttgatctaa ccagccccat ttatcttcgg tttcgccagt
     6901 gaagaggccg aagaaggctt gctgaatgcg tttggtaacc gggccacaac ggccttcgcc
     6961 aacctgaata ccgtctacgc tgcgcactgg cgtgatttct gccgcagtac cggacataaa
     7021 cacttcatcc gccaggtaca gggattcgcg cgacagcacc tgctcacgca cttcaattcc
     7081 cagctctttc gccagtttga tgatggcatc acgggtaata cccggcagcg cggatgaggt
     7141 aaacggtggg gtgaacagca cgccgtcttt cacttcaaac aggttttcac ctgcgccttc
     7201 agagatgtaa ccgttcacat ccagcgcgat accttcctga taaccgtggc ggcgcgcttc
     7261 gctacccacc agcagggaag agaggtagtt accaccggct tttgccgccg tcgggatggt
     7321 gtttggtgct gcgcggttcc aggaggaaac catcgcatcg atcccctgct ccagcgcttc
     7381 tgcgcccaga tacgctcccc acgggaaagc agcgataatc acgtcggttg agtatcccgc
     7441 tggcgggttt actcccatgc caacatcacc gacgaagatc agcggacgga tataggcgct
     7501 ggtgagatta tttttgcgga tcacgtcacg acaagcttcc atcagctcat caatgctctg
     7561 cgaaaccggg aagcgataga ttttggcgga gtcatgcaga cgctgcatat gctcacgatg
     7621 gcggaataca accggtcctt tgtgcgagtc gtagcaacgg atgccttcaa aaaccgaagt
     7681 gccatagtgc agcgcgtgcg acatcacatg caccttcgcg tcttcccagc gaaccatctc
     7741 cccattgaac caaatgtaat cagctttctt cgtggtcatt tttatattcc ttttgcgctc
     7801 aggcgcggat ttgttgtgat gtggttgtgc tctggcagat ggcaacgtgt gcgacgtcca
     7861 ccagtttatt taactgacta aacagtaagt cgaccgaccg tgggctggca acggtcaatt
     7921 cgatatttat attttgtgca tcgctggcgg cggccatatt cattgagcag acgtggaaac
     7981 cacgatgacg caccacgcgt aaaacacgtt ctaaggtttc cggattgaag cgagccgata
     8041 cattgacctg atattgcatc atgataattt ctccaacatt tctgaattac tggcgccagg
     8101 cggcaccagc ggccagacgt tctcaagttc gtcgattgag acatgaagca ggtatggccc
     8161 atcactgttc agcatggtgt cgagtgccgc ttcaacctgg tctttacggg tgatgtgttg
     8221 gccagggatg ccgaaggcgc tggctaacat gaggaaatcg gggttatcag taagggtggt
     8281 ttcgctgtat cgttcctgaa aaaacagttg ctgccattgt cgaaccatcc ctaaccgttg
     8341 gttatcgagt aagacgattt tcaacggtaa ctgcttgcgt tttacggtgc ccagctcttg
     8401 cacattcatc atgaaagagc cgtcaccgga gatacagacg acggtatcgt tcggtcgcgc
     8461 gacttgtgcg ccaaccgccg ctggtaaacc aaaacccata gtgcctaagc cgctggaggt
     8521 gatgaaattt tccgggcgag tgtgggcgat gtgttgcgca gcccacatct ggtgctgccc
     8581 cacatctgtg gtcacgacgc aatccgcagg tttacgatcc gacagttgtt ttaacaacaa
     8641 cggcgcgtag atagcgtcgc cgggatggtc gtaacgccag gcatgttcat cacgcagctg
     8701 cgcgcagtat tgctgccagt cattgatatt taacggctgc tgtaattctg gtaacagagc
     8761 atttaaatca ccttgtaatg ccacatgtgc ctgacgcagc ttgttcattt ctgccgggtc
     8821 gatatccata tggataacgc tggcgtgtgg tgcgaaggtg ttcagtttgc cggtcacccg
     8881 gtcatcaaaa cgtgcaccca cggcgatcag caagtcgcac tcctgcaccg cgaagttcgc
     8941 cgctttggtg ccatgcattc ccagcatgcc cagatagtac ggataatctg cttcaactgc
     9001 gcccagccct ttcagcgtgc aggtggcagg catttttgtg gtagcgagaa attctcgtaa
     9061 agcaggaact gcctgcgcca tacccacgcc accaccaacg tacagcatcg gtttttgcgc
     9121 ttttgccagc atctggcgcg cttgctcaac ttcggcatgt gggaaagtca cttcgttttc
     9181 aacggtggtg aaccacggtt ccaggtcacc gctggctagc tggatatctt ttgggatatc
     9241 gaccagaacc ggaccaggac gacctgagct ggcaacgtcg aatgcttcag ccataatgcg
     9301 cggcaactct tccagcgact gcaccagaaa gctgtgcttg gtacaggcta acgacaatcc
     9361 caggacatcc acttcctgaa atgcatcagt gccgataaac ggtgcggaca cttgaccggt
     9421 gatggcaaca acagggatag aatctaacag tgcgtccgca agcccggtta tcaggttggt
     9481 tgcgcccgga ccagacgtgg cgatacatac gccagttttg ccggtagcac gggcataacc
     9541 gatagccgcc attgccgcac cctgctcatg tcggcacagc aagtgctcca cgccgccgtc
     9601 atacaatgca tcgtaaaccg gcataattgc gccacccgga taaccgaaaa cggtgttcac
     9661 accctgtgcc cgcaacgcat gtaccaccca ctgtgcgcca ttcatagtta gttccccgtg
     9721 ctgaatgttg agaaacagaa ttttgtgctg ttattcattg tctgctcctc ggttatgttt
     9781 ttaaggtcaa aaaaaacccc cggacctttc ggtgcggggg tcttagttcg ttaaggcttg
     9841 atttctaagc ctttcctcgt ccaagtgcag ccccgcacgg tgggataata atcaccacca
     9901 cgctaatcac gaccaggcta atcactcgta gaagggctgt cattttgtct tttcttgcat
     9961 cttgttcgaa ggaatgccta aagagttacc ataggttttg taaatagtac aagatatttt
    10021 ttggccgatt tttatgacgc gtttaataat ttcaatataa gttgttgttt tttaaaaata
    10081 aaatagtgag taaaaaaatt caatttcagt atgaatgttg ttcccttcct cgtagttcat
    10141 cctttgtccg ctgcattttt gcgagcatca ttccaccgcc agaacaactc aacttcactt
    10201 gcacaaataa acaggaatca gccactaaaa ttcacgaatt agcgggctac agcagcgata
    10261 tcttatgcac ataatggtga ctcaaggagg gcttatgtca ctgtcaattg ttcatacccg
    10321 cgcagccctg ggagtaaatg cgcccccgat cactgttgag gtacatatca gtaaaggtct
    10381 acccggctta acgaaggtgg gcttaccaga aacaacggta aaagaagctc gcgatcgcgt
    10441 gcgcagcgcc attatcaata gcggatatga atatccggcg aaaaaaatca ccatcaacct
    10501 ggctccagct gatctgccaa aagaaggggg acgatatgat ttacctatcg ccattgcgtt
    10561 gctggcggcc tcagaacagc ttacagccaa taagttagat gaatatggat tagtcggaga
    10621 actggcgctt acaggcgctc tgcgtggcgt tcccggcgca atctccagta caactgaagc
    10681 tattaagtcg ggcagaaaaa ttatcgtcgc gaaagataac gaagatgaag tggggctaat
    10741 taacggtgaa ggatgcctga tagccgatca tctgcaagct gtctgtgcgt ttctggaagg
    10801 taagcacgct ctcgaacgcc cgaaaccaac tgatacagta tcccgggcgc tacaacatga
    10861 tctcagtgat gttatcggtc aggaacaagg aaagcgagga ctggaaatta ccgccgctgg
    10921 cgggcacaac cttttactga ttgggccgcc gggaacaggt aaaacaatgc tcgccagccg
    10981 tattaatggc ctgttgccag atttaagcaa tgaagaggca ctggagagtg ctgcgatatt
    11041 aagtctggta aatgctgaat cagtacaaaa acaatggcgg cagcgcccgt tccgctcacc
    11101 tcatcacagt gcatcgttaa ctgcgatggt aggcggtggc gcaattccag ggcccggtga
    11161 aatttcgctg gcgcataacg gcgtgctttt tcttgatgag ttacctgaat ttgaaaggcg
    11221 tacactggat gccttgcgag agccgattga atccgggcag atccatcttt cacgcacgcg
    11281 agcaaaaata acctatccag cccgtttcca gcttgtcgcg gcgatgaatc ccagccctac
    11341 cggacattat cagggaaacc ataaccgctg cacaccagag caaacgctgc gttatctcaa
    11401 ccgactctct ggtccctttc tcgaccgctt cgatctctca ctggagatcc cattaccgcc
    11461 tcccggtatt ttgagtaaaa cggtagtgcc gggagaaagc agcgccaccg ttaaacaacg
    11521 cgtaatggcc gccagagagc gccaatttaa gcggcagaat aaactgaacg cctggctgga
    11581 tagtccggaa atacgccaat tctgcaaact tgagagcgaa gatgcgatgt ggctggaaga
    11641 aacgctgatc catctggggt tatcgattcg tgcctagcag cggttattga aagttgcacg
    11701 aaccattgct gatattgatc agtctgacat tatcacacgt caacatttgc aggaggcagt
    11761 tagctatcga gcgattgacc gtttgctcat ccatctgcag aaactactga cataaaaaaa
    11821 gggcatttcg ccctttttat taatcgtcag aatcggtgta gtcttcagca ccttcaacct
    11881 gcggtttacc gccggaaagg gtgtgaaaac gttttggacg cttaatacgc gtcatatact
    11941 tggaccacac gcgttctgct tctgtcactg gctcacgttc gccacggcat actgctacga
    12001 agagtttctc ttcctcggta accggctcgc gtttgccaag atccaactca ttgaaggcat
    12061 aaccatgacg ctcaagcagt tgtgcctctt tgatggtgaa atcaccatga cgagagaatc
    12121 cacgtggata atgtttattg tcgaaatatc gattagtcgt cgtaaagctt tccgccatcc
    12181 tgcacgctcc taattctttg accgagctag ttatggcgcg gagtattagt tacgcttgac
    12241 agagtgtaaa acaaaacatt taaatcataa cgacaaataa ttttgcggag agcactgtgg
    12301 atacggaatt gttaaaaact ttcctggaag ttagccgaac gcgtcacttt ggtcgagcgg
    12361 ctgaatcgct ctatctgacc cagtcagcag tgagctttcg aatcagacaa ctggaaaatc
    12421 aactgggtgt gaaccttttc acccgccaca gaaacaatat ccgtttaacc gctgccggtg
    12481 aaaaactact gccttatgca gaaacgctca tgagcacctg gcaggccgcc cgcaaggagg
    12541 tggcgcatac ctcacgacat aacgagtttt ctatcggtgc cagcgcctca ttgtgggaat
    12601 gtatgcttaa tcagtggctg ggacgtttgt atcaaaatca ggatgcccat acaggcttac
    12661 agttcgaagc gcgaattgcc caacggcagt ctctggtaaa acagctgcat gaacgccagc
    12721 ttgatcttct tattaccact gaagcgccca aaatggacga atttagtagt cagttgctgg
    12781 gatatttcac tttagcgctt tataccagtg ccccttcaaa actaaaggga gatcttaatt
    12841 atctgcgact tgagtggggg ccagattttc aacagcatga ggcaggtttg atcggtgctg
    12901 acgaagtgcc cattctgaca accagttctg ctgaactggc acagcaacag attgcgatgc
    12961 ttaatggttg cacctggcta cccgtcagct gggcgcgtaa aaaaggcggc ctgcataccg
    13021 ttgtcgatag cacaacactt tcacggccgc tttatgccat atggctgcaa aatagcgata
    13081 aaaatgcgtt gattcgcgat cttttgaaaa ttaacgtgct ggatgaagtg tattaatatg
    13141 aatggctggc aaggatgccg gtagaaggat ttacttcgga gagggttatt tcagataaaa
    13201 aaaatcctta gctttcgcta aggatgattt ctggcagggg cggagagact cgaactccca
    13261 acacccggtt ttggagaccg gtgctctacc aattgaacta cgcccctaat tagggtggcg
    13321 gaacggacg
//
LOCUS       DADKRT010000118        13097 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.119, whole genome shotgun sequence.
ACCESSION   DADKRT010000118 DADKRT010000000
VERSION     DADKRT010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13097
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.119"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            176..1150
                     /gene="cysB"
                     /locus_tag="JQ356_002860"
     CDS             176..1150
                     /gene="cysB"
                     /locus_tag="JQ356_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HAY4622888.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QTRYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM
                     LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
     gene            1445..1609
                     /locus_tag="JQ356_002861"
     CDS             1445..1609
                     /locus_tag="JQ356_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HAY4622889.1"
                     /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV
                     VALLIWKVWG"
     gene            1612..1779
                     /locus_tag="JQ356_002862"
     CDS             1612..1779
                     /locus_tag="JQ356_002862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622890.1"
                     /translation="MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFI
                     ELFAEDDQPKQ"
     gene            1893..1988
                     /locus_tag="JQ356_002863"
     CDS             1893..1988
                     /locus_tag="JQ356_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622891.1"
                     /translation="MINTNMKYWSWMGAFSLSMLFWAELLWIITH"
     gene            2152..4827
                     /gene="acnA"
                     /locus_tag="JQ356_002864"
                     /pseudo
     CDS             2152..4827
                     /gene="acnA"
                     /locus_tag="JQ356_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415792.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
     gene            complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="JQ356_002865"
     CDS             complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="JQ356_002865"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HAY4622892.1"
                     /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
     gene            5651..6415
                     /gene="pgpB"
                     /locus_tag="JQ356_002866"
     CDS             5651..6415
                     /gene="pgpB"
                     /locus_tag="JQ356_002866"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HAY4622893.1"
                     /translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
                     TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
                     PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
                     SGHTMFAASWALLAVGLLWPRRRTLTIAILLLWATGVMGSRLLLGMHWPRDLVVATLI
                     SWALVAVATWLAQRICGPLTPPAEENREIAQREQES"
     gene            6564..6872
                     /gene="lapA"
                     /locus_tag="JQ356_002867"
     CDS             6564..6872
                     /gene="lapA"
                     /locus_tag="JQ356_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA"
                     /protein_id="HAY4622894.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
                     "
     gene            6879..8048
                     /gene="lapB"
                     /locus_tag="JQ356_002868"
     CDS             6879..8048
                     /gene="lapB"
                     /locus_tag="JQ356_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HAY4622895.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
                     IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSI
                     MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
                     EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
     gene            8241..8978
                     /gene="pyrF"
                     /locus_tag="JQ356_002869"
     CDS             8241..8978
                     /gene="pyrF"
                     /locus_tag="JQ356_002869"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HAY4622896.1"
                     /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLK
                     VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG
                     GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQK
                     CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALAAGVDYM
                     VIGRPVTQSVDPAQTLKAINASLQRSA"
     gene            8978..9304
                     /gene="yciH"
                     /locus_tag="JQ356_002870"
     CDS             8978..9304
                     /gene="yciH"
                     /locus_tag="JQ356_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415798.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HAY4622897.1"
                     /translation="MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKG
                     KGVCLITGIDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK
                     VKLAGG"
     gene            complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="JQ356_002871"
     CDS             complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="JQ356_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HAY4622898.1"
                     /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
     gene            complement(9917..10666)
                     /locus_tag="JQ356_002872"
     CDS             complement(9917..10666)
                     /locus_tag="JQ356_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY4622899.1"
                     /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
                     SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA
                     RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
                     SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEVIVLTDSSKFGAVHSYSIGPVE
                     RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
     gene            complement(10756..10929)
                     /locus_tag="JQ356_002873"
     CDS             complement(10756..10929)
                     /locus_tag="JQ356_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622900.1"
                     /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA
                     ESTPDIPKAPWEI"
     gene            complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="JQ356_002874"
     CDS             complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="JQ356_002874"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY4622901.1"
                     /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL
                     QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV
                     ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF
                     MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKSEIFLIC
                     SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN
                     FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA
                     SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF
                     CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER
                     GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT
                     IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY
                     SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE
                     DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA"
BASE COUNT         3334 a         3083 c         3293 g         3387 t
ORIGIN      
        1 tcgcgaaagc ggcccttttt tattgcatat tattttttct tcacacctat acactaaggc
       61 tataaatgat atagtggtta tagttagcac cttttttatt attaaatcgt attagtcacc
      121 cgccaggtgt gacgaaaaaa cgatgttctg atggcgtcta agtggatggt ttaacatgaa
      181 attacaacaa cttcgctata ttgttgaggt ggtcaatcat aacctgaatg tctcatcaac
      241 agcggaagga ctttacacat cacaacccgg gatcagtaaa caagtcagaa tgctggaaga
      301 cgagctaggc attcaaattt tttcccgaag cggcaagcac ctgacgcagg taacgccagc
      361 agggcaagaa ataattcgta tcgctcgcga agtcctgtcg aaagtcgatg ccataaaatc
      421 ggttgccgga gagcacacct ggccggataa aggctcactg tatatcgcca ccacgcatac
      481 ccagacacgc tacgcattac caaacgtcat caaaggcttt attgagcgtt atcctcgcgt
      541 ttctttgcat atgcaccagg gctcgccgac acaaattgct gatgccgtct ctaaaggcaa
      601 tgccgatttc gctatcgcca cagaagcgct gcatctgtat gaagatttag tgatgttacc
      661 gtgctaccac tggaatcggg ctattgtagt cactccggat cacccgctgg caggcaaaaa
      721 agccattacc attgaagaac tggcgcaata tccgttggtg acatatacct tcggctttac
      781 cggacgttca gaactggata ctgcctttaa ccgcgcaggg ttaacgccgc gtatcgtttt
      841 cacggcaacg gatgctgacg tcattaaaac ttacgtccgg ttagggctgg gggtaggggt
      901 cattgccagc atggcggtgg atccggtcgc cgatccggac cttgtgcgcg ttgatgctca
      961 cgatatcttc agccacagta caaccaaaat tggttttcgc cgtagtactt ttttgcgcag
     1021 ttatatgtat gatttcattc agcgttttgc accgcattta acgcgtgatg tcgttgatgc
     1081 ggctgtcgca ttgcgctcta atgaagaaat tgaggtcatg tttaaagata taaaactgcc
     1141 ggaaaaataa tttcttgcgt tattttcggc accttttatg tagcgaaggt gccggaatat
     1201 attctctttt gttacttatt tttataccgt gcacaatatt tttatccctc atatttatag
     1261 ggtaaattac ctgtaaagta gtgtctaatt acccgcctcg caaattccag ttttcaaata
     1321 tctatttcag gtcaaaagat tgaattattc actggagacg attcgtaaat tcgctggatt
     1381 tttgactaaa gtttctttag gatttgtctc atcgtatgat taattacacc aatcgttcaa
     1441 cgtcttgctg ataagtgatg gcgattatat gaggttagca atgccttctg gaaatcagga
     1501 accccgccgc gatcctgaat taaaacgtaa agcctggctg gcggtttttc ttggttctgc
     1561 acttttctgg gtggttgtcg cactgctgat ttggaaagtg tggggataac tatggtcggt
     1621 caggagcaac tggagtcgtc accattatgc cagcatagtg acaatgaaac agaaacgaaa
     1681 cgggaatgtt ccgtcgttat tccagacgac tggcaactaa catcgcagca gcaagccttt
     1741 atagaactgt ttgctgaaga tgatcagccg aaacaataat tatcatcatt cttattaccc
     1801 atttttaatg aattaaaggg cttttaatac accgcagcaa taacagcttg agttatctca
     1861 acacaaaata ataaccgtta agggtgtagc ctatgatcaa cacaaatatg aaatattggt
     1921 cctggatggg cgcgttttct ctgtcgatgc tcttctgggc cgaactcctc tggatcatta
     1981 ctcactgatc cttgaccccg ctgcggcggg gttgtcattt gctttgccac aaggtttctc
     2041 ctcttttatc aatttgggtt gttatcaaat cgttacgcga tgtttgtgtt atctttaata
     2101 ttcaccctga agagaatcag ggcttcgcaa ccctgtcatt aaggaggagc tatgtcgtca
     2161 accctacgag aagccagtaa ggacacgttg caggccaaag ataaaactta ccactactac
     2221 agcctgccgc ttgctgctaa atcactgggc gatatcaccc gtctacccaa gtcactcaaa
     2281 gttttgctcg aaaacctgct gcgctggcag gatggtaact cggttaccga agaggatatc
     2341 cacgcgctgg caggatggct gaaaaatgcc catgctgacc gtgaaattgc ctaccgcccg
     2401 gcaagggtgc tgatgtagga ctttaccggc gtacctgccg ttgttgatct ggcggcaatg
     2461 cgcgaagcgg ttaaacgcct cggcggcgat actgcaaagg ttaacccgct ctcaccggtc
     2521 gacctggtca ttgaccactc ggtgaccgtc gatcgttttg gtgatgatga ggcatttgaa
     2581 gaaaacgtac gcctggaaat ggagcgcaac cacgaacgtt atgtgttcct gaaatgggga
     2641 aagcaagcgt tcagtcggtt tagcgtcgtg ccgccaggca caggcatttg ccatcaggtt
     2701 aacctcgaat atctcggcaa agcagtgtgg agtgaattgc aggacggtga atggattgct
     2761 tatccggata cactcgttgg tactgactcg cacaccacta tgatcaacgg ccttggcgtg
     2821 ctggggtggg gcgtgggtgg gatcgaagca gaagccgcaa tgttaggcca gccggtttcc
     2881 atgcttatcc cggacgtagt gggctttaaa cttaccggta aattacgtga aggtattacc
     2941 gccacagacc tggttctcac tgttacccaa atgctgcgca aacatggcgt ggtggggaaa
     3001 ttcgtcgaat tttatggtga tggtctggat tcactaccgc tggcggatcg cgccaccatt
     3061 gccaatatgt cgccagaata tggtgccacc tgtggcttct tcccaatcga tgctgtaacc
     3121 ctcgattaca tgcgtttaag cgggcgcagc gaagatcagg ttgagttggt cgaaaaatat
     3181 gccaaagcgc agggcatgtg gcgtaacccg ggcgatgaac cgatttttac cagtacgtta
     3241 gaactggata tgaatgacgt tgaagcgagc ctggcagggc caaaacgtcc acaggatcgc
     3301 gttgcactgc ccgatgtacc aaaagcattt gccgccagta acgaactgga agtgaatgcc
     3361 acgcataaag atcgccagcc ggtcgattat gttatgaacg gacatcagta tcagttacct
     3421 gatggcgctg tggtcattgc tgcgataacc tcgtgcacca acacctctaa cccaagtgtg
     3481 ctgatggccg caggcttgct ggcgaaaaaa gccgtaactc tgggcctcaa gcggcaaccg
     3541 tgggtcaaag cgtcgctggc accgggttcg aaagtcgttt ctgattatct ggcaaaagcg
     3601 aaactgacac cgtatctcga cgaactgggg tttaaccttg tgggatacgg ttgtaccacc
     3661 tgtattggta actctgggcc gctgcccgat cctatcgaaa cggcaatcaa aaaaggcgat
     3721 ttaaccgtcg gtgcggtgct gtccggcaac cgtaactttg aaggccgtat ccatccgctg
     3781 gttaaaacta actggctggc ctcgccgccg ctggtggttg cctatgcgct ggcgggaaat
     3841 atgaatatca acctggctgc tgagcctatt ggtcatgatc gtaaaggcga cccggtttat
     3901 ctgaaagata tctggccatc ggcacaggaa attgcccgtg cggtagaaca agtctccaca
     3961 gaaatgttcc gtaaagagta cgcagaagtt tttgaaggca cagcagagtg gaaggaaatt
     4021 aacgtcacac gatccgatac ctacggttgg caggaggatt caacctatat tcgcttatcg
     4081 cctttctttg atgaaatgca ggcaacacca gcacctgtgg aagatattca cggtgcgcgg
     4141 atcctcgcaa tgctggggga ttcagtcacc actgaccata tctctccggc gggcagtatt
     4201 aagcccgaca gcccggcggg tcgatatcta caaggtcggg gtgttgagcg aaaagacttt
     4261 aactcctacg gttcgcggcg tggtaaccat gaagtgatga tgcgcggcac cttcgccaat
     4321 attcgcatcc gtaatgaaat ggtgcctggc gttgaagggg ggatgacgcg gcatttacct
     4381 gacagcgatg ttgtctctat ctatgatgcc gcgatgcgct ataagcagga gcaaacgccg
     4441 ctggcggtga ttgccgggaa agagtatgga tcaggctcca gccgtgactg gacggcaaaa
     4501 ggtccgcgtc tgcttggtat tcgtgtggtg attgccgaat cgtttgaacg aattcaccgt
     4561 tcgaatttaa ttggcatggg catcttgccg ctggaatttc cgcaaggcgt gacgcgtaaa
     4621 acgttagggc taaccgggga agagaagatt gatattggcg acctgcaaaa tctacaaccc
     4681 ggcgcgacgg ttccggtgac gcttacgcgc gcggatggta gccaggaagt cgtaccctgc
     4741 cgttgtcgta tcgacaccgc gacggagttg acctactacc agaacgacgg cattttgcat
     4801 tatgtcattc gtaatatgct gaagtaacaa gtatttgctt gccggttatt ttgcttccgg
     4861 caagcaaatt aattccacaa tgcgagaggg ttatttgttc agcaaatgac ccattttctc
     4921 ggctttggta tcgagataat gttcgttatt ggggttacga cctacaatca atggtacgcg
     4981 ttcaacaata ttaatccctg cttcggtcag aatttcgact tttttcgggt tattggttaa
     5041 caagcggact tcattgacgc caaggagttt gaacatatca gcgcaaagag tgaagtcgcg
     5101 ctcatcagcg gcgaagccta actggtggtt agcctctacg gtatcgtaac cttgatcctg
     5161 cagtgcgtaa gcgcggattt tattcagcag accaatgtta cgaccttcct gacggtgata
     5221 cagcaaaata ccacggcctt cctcggcaat ttgcgtcaat gccgcttcga gctggaagcc
     5281 acaatcgcag cgcaagctga acagggcgtc accggtcaga cattcggaat ggacgcgcgc
     5341 aagtaccggg gtatgcccgg aaatatcgcc atagactagc gcgacatgat cgtgtccggt
     5401 tgccagttct tcaaatccca ccatcaggaa atcgccccat ggggttggca gtttggcttc
     5461 tgccacacgt ttaagctgca tgaaattctc cagataatgc tggttctgta ttggcttatt
     5521 ttgccataac gagaaggggt tcacctaatc acgacgcgtc gatcgttcac ggaatggcac
     5581 aaatctgtca atttttcctg gaactggcgt tttcagttat gattgtggga cttatcaaaa
     5641 aggagaggcc atgcgttcga ttgccagacg taccgcagtg ggagctgcac tattgcttgt
     5701 catgccagta gccgtatgga tttctggctg gcgttggcaa cctggagaac aaagttggct
     5761 actaaaagcg gctttttggg ttactgaaac tgtcacccag ccctggggcg tcattacaca
     5821 tttgatttta ttcggctggt ttctctggtg tctgcgtttt cgcattaagg ctgcctttgt
     5881 attatttgcc attctggcgg ccgcaatcct tgtgggacaa ggcgttaaat cctggatcaa
     5941 agacaaagtc caggaaccac gaccttttgt tatctggctg gaaaaaacac atcatattcc
     6001 ggttgatgag ttctacactt taaagcgagc agaacgcgga aatctagtga aagaacagtt
     6061 ggctgaagag aaaaatatcc cacaatattt gcgttcacac tggcagaaag agacggggtt
     6121 tgcctttcct tccggtcaca cgatgtttgc tgccagttgg gcactgctgg ccgttggttt
     6181 gctgtggccg cgtcggcgaa cgttaaccat tgctatcttg ctgctctggg caacgggagt
     6241 catgggaagc cgcctgctgc tcgggatgca ttggccacgc gatctggtag tagctacatt
     6301 gatttcgtgg gcgctggtgg cggtggcaac gtggcttgcg caacgaattt gtgggccatt
     6361 aacaccacct gcggaagaaa atcgcgaaat agcgcaacga gaacaagaaa gttaacgctg
     6421 gttgattttc cgaatttagc ccttaaatca tcaacaatgc gcgtggatgc catttcgcag
     6481 acggcgcgaa aatggtactt taaagggcta ttgcggtaag ttgaccataa tttattcgct
     6541 ctaaccacat aacgggaagt aatgtgaaat atttactcat tttcttactg gtgttagcga
     6601 tcttcgtgat ttcggtcacg ttgggtgcgc agaacgatca acaggtgacg tttaattatc
     6661 tgttagcgca aggggagtac cgtatttcca cattgctggc ggtattgttt gctgcggggt
     6721 ttgctatcgg ttggttgatt tgtggcctgt tctggctgcg agttcgtgtt tccctggcgc
     6781 gcgctgaacg taaaataaag cgactggaaa accagctttc acccgcgact gacgtggctg
     6841 tagtgccgca ctcgtcagcg gcgaaggaat aactttctat gctggagttg ttgtttctgc
     6901 ttttgcctgt agccgctgcc tatggctggt atatgggccg cagaagtgcg caacaaaaca
     6961 agcaagatga agccaaccgc ttgtcgcgtg attacgtagc gggggttaac ttcctgctta
     7021 gtaatcaaca ggataaagcg gtagacctgt ttctcgatat gcttaaagag gatacaggca
     7081 ccgttgaagc ccaccttacg ctcggaaacc tgttccgttc gcgtggcgaa gttgatcgcg
     7141 ctattcgcat ccatcagacc ctaatggaaa gcgcctcgct gacctatgaa cagcgtctgt
     7201 tggcgattca acaactaggg cgtgattaca tggccgccgg gttatacgac cgcgcggaag
     7261 acatgttcaa tcagctgacc gatgaaactg acttccgcat tggcgctctg caacagttgc
     7321 tacaaatcta ccaggctacc agtgagtggc agaaagcaat tgatgttgcc gaacgcctgg
     7381 tgaagctggg taaagataaa cagcgcgtcg aaattgccca tttctactgt gagttagccc
     7441 tgcagcatat ggccagcgac gatctcgatc gtgccatgac cttgctaaaa aaaggggcgg
     7501 cggcagataa aaacagagcc cgcgtatcca tcatgatggg acgcgtgttt atggcgaaag
     7561 gagaatacgc caaagccgtc gaaagtttgc aacgcgtgat atcccaggac agagaactgg
     7621 tcagcgaaac gctggaaatg ttgcaaacct gctatcagca gttgggtaaa actgccgaat
     7681 gggcagaatt cctgcaacgc gcggtggaag agaacaccgg tgccgatgct gaattgatgc
     7741 ttgctgatat catcgaagcg cgcgacggta gtgaggccgc acaggtctat attacgcgcc
     7801 agcttcagcg tcatccgacc atgcgtgtgt tccataagtt aatggattac cacttaaatg
     7861 aagcggaaga agggcgtgcc aaagagagcc tgatggtgct gcgtgacatg gttggcgaaa
     7921 aggtacgtag taagcctcgt tatcgctgcc agaaatgtgg ttttaccgca tacaccctct
     7981 actggcattg tccgtcttgt cgggcctggt caaccattaa accgattcgc ggtcttgatg
     8041 gcctgtaatt tttaaaaaaa tccgacttta gttacaacat gctagttatt gatgttccat
     8101 tgtgctccgg caacgacgga gcagaaaaag cctgccaggg gaaaaatcgc aactgttaat
     8161 tttttatttc cacgggtaga atgctcgccg tttacctgtt tcgcgccact tccggtgccc
     8221 atcatcaaga aggtctggtc atgacgttaa ctgcttcatc ttcttcccgc gctgttacga
     8281 attctcctgt ggttgttgcc cttgattatc ataatcgtga tgacgcgctg tcctttgtcg
     8341 acaagatcga cccacgcgat tgtcgtctga aggtcggcaa agagatgttt acattgtttg
     8401 ggccacagtt tgtgcgcgaa cttcaacagc gtggttttga tatctttctt gacctgaaat
     8461 tccacgatat tcctaacact gcagcgcacg ctgtcgctgc tgcagctgac ttaggcgtgt
     8521 ggatggtgaa tgttcatgcc tctggtgggg cgcgtatgat gaccgcagcg cgtgaggcac
     8581 tggttccgtt tggcaaagat gcaccgcttt tgattgctgt aacagtgttg accagcatgg
     8641 aagctagcga cctggccgat cttggcgtga cactgtcacc tgcagattat gcagaacgtc
     8701 tggcggcact gacgcaaaaa tgtggccttg atggtgtggt gtgttctgct caggaagctg
     8761 tgcgctttaa acaggtattc ggtcaggagt tcaaactggt tacaccgggc attcgtccgc
     8821 aggggagtga tgctggtgac cagcgccgca ttatgacgcc agaacaggcg ttggcggctg
     8881 gtgttgatta tatggtgatt ggtcgcccgg taacgcaatc ggtagatcca gcgcaaacac
     8941 tgaaagcgat caacgcctct ttacagcgga gtgcatgatg agtgattcca acagccgtct
     9001 ggtctactca acggaaaccg gacgtattga tgagccaaaa gcggccccag tacgccctaa
     9061 aggcgatggt gtggtgcgta ttcagcgtca gaccagtgga cgtaaaggta agggcgtttg
     9121 cctgattacc ggtatcgatc tcgatgatgc cgaactgaca aaacttgcag cggaactgaa
     9181 gaaaaaatgc ggctgcggcg gagcagttaa agatggagtt attgaaatcc agggcgataa
     9241 gcgtgattta ttaaaatcac tacttgaagc gaaagggatg aaggtaaaac tcgcaggcgg
     9301 ttaacataaa aagccacgga tatatccgtg gctttcgaat attttactgt gtgtattatt
     9361 cagttatttc gtactgaaca aaatcaagcg tattataatt gcgagtcgat aatcgacatt
     9421 tatttacgat tatttaccga cctggtgacc aataacacca ccgacagctg caccacctaa
     9481 tgtacccaac gtactgccat cggtcagtac tgcaccgcct aatgcccctg cacccgcgcc
     9541 gattgcggtg ttgcggtccc gtttagacca gttagaacag gcactcagag acattgccaa
     9601 agtaattgcc agaacagccg cggtcatttt tttgctcgtt acaaacataa tactctctcc
     9661 tgaatttatg attcacggaa gtaagctctc tataactata atagctaaga ataagcctgg
     9721 tgaaattatt ccgtgaaatc tgctcgcgcg cagggttata tcacgcaggt gataatgact
     9781 tcctgttata tcgctgataa taattttata tcttaagcgt gttaataaca ggtaaatagt
     9841 cttaattatc aaccaggaat catcttagag cggatgattt gccaaactgc aaatcatccg
     9901 tagagaaggg aaatggttaa atgtcaacga cgtgaacggt gagtttactg tgctcaagat
     9961 gcatcagatc gctggcgcgt attttcgaat cggtaatcac gcgattgaat cgctcaacgg
    10021 gaccgatgga gtatgaatgt acagcaccaa atttcgagct gtcagtcagg actatcactt
    10081 cgcactcttt ttccagcacg gcattgacca catcggtacg catcatatcg cgaccggtga
    10141 atccagtttc aggttgccag ccatcaatac caataaatgc tttgctgaaa tgcacctgct
    10201 ggatgcactg gcgtgtcaac gggccaacca tactttcgct ttttttctgg tacacgccac
    10261 cgagcaaaat gacttcacaa ggcgcgtctt tcagcaaatg cgcgatgtag ctgctgaccg
    10321 tgatgatagt gacatttttc ttctgctccc ccagagtccg ggcgagcagg gcattgctgc
    10381 tgccattttc gataaagatg gtttcgcccg gttgaaccag tgacgcggca aactcggcga
    10441 gttcacgctt cagcgtatag ttgctcatca tacgggtttc gacgtcatca ctatcaagcg
    10501 aaactgcaaa gccatgtgca cggcggaggt aactcagttt ttcgagggtg ttgagatcct
    10561 ggcgaatggt aacttcagaa actccagtgg cttttgccag atcggttacg ctaacctgac
    10621 cctggtcaat gaccatctgt agaatagttt gttgtcggga attcatcgct gtaattctta
    10681 taacgttata atactaaata aaaaaatact gacgcgccgg gcatcctcaa ataggaaaac
    10741 ctgaaggcac gattgttaaa tctcccacgg tgccttcggg atgtctggcg tagattcagc
    10801 aacctggcgc aagagttctg ctttaagtat ctcgagatta tggatcgcag agtggtaatc
    10861 gcctgccaca aggatatcta acacaatatc aatacgttcg gcaacgcgct gggcatcaaa
    10921 ttcagacatc aaggacatcc ttatagcaaa agtggaaaat gaataatgca aaaattgccg
    10981 ctaaaagaga agtgtttaac agcaacggct aattatcatc caggaatacg atatataatg
    11041 acgggatata gcgctaagta tatatattca tctacttatg cgcgcttcag atagcgttta
    11101 taccagcgtt cgaaggcgac ggcgggcatc ggtttggcaa acaaaaatcc ttgccgctca
    11161 ttgatcccgt tcttggttaa aaaagcatct tcctttgcac tctctacacc ttcggcgatc
    11221 acctgaagat tcaatgcctg ggccacagcg acgatcgccc ggaccagtga ctgcgagaca
    11281 ggttgtttgt gaatatctcg aacaaaaacc tggtcaagtt tgatggcatc gatcggaaag
    11341 cgcgccagtt gcgaaagtga agagtagccg gtaccaaaat catccagatg cacttgcgca
    11401 cctagttggc taaattgttg aataacagac agtgccagtt catcattctc aatcagacaa
    11461 ctctctgtca gttcaacatc tatagggcag tattcaaaat tgagttcctg gagaacctgt
    11521 ttcagggcgg tgaaaatggt ttgatcggcg agctgacgtg cagaaatatt taccgccact
    11581 cgcaggttta tgcctttatc ccgccacttt gccacctggc gtacgacatc gagaatcacc
    11641 caacggccta aaggcacaat tagccctgac tcttcggcgt aggaaatgaa gtccaacggt
    11701 ggaatcaacc cacgttcagg tgactgccaa cgtactagtg cttccagact gcgcacttcg
    11761 ccacgccagg tgattttcgg ttgatagtga ataaccaact gatcgttttc cagtgcttta
    11821 cgcaagttgg tatccagcca gagatattca aatacccgtt gattcatttc tggggtaaaa
    11881 acgcaaaatt gtcctcgtcc gccttccttc gctgtgtaca ttgctgtgtc ggcgtgacga
    11941 ataatagccg tgctgtctga accatgttcg ggagagagtg caatacctac tgaacagctg
    12001 gtataaactt caattaaacc aatgcgaaag gggagccgta agcgggtcaa aattcgtgat
    12061 gccattgctt ccagcgcgct ttgtgaggtg ttggatgcca gtaccagaaa ctcatcccca
    12121 cctggacgcg ccaacacctg gtcatgttcg agacagctta aaatagccaa tgacacgtcg
    12181 cgtaataact ggtcaccaaa caaatgccca taggcgtcgt tgaccttttt gaaattatcc
    12241 aaatcaagat acacaacccc aactttattg ttatctgcat gattaatagc gtgatcgatt
    12301 aaatcctgca ttgcgttacg attcggcagt ccggtgatac tgtcggtatt tgccagaata
    12361 cgcagtcgct cctgagcgcg gcgctcttcg gtaatgtcgg tgccggaaca gattaaaaaa
    12421 atctcgcttt tgccactgcc gctgtggaca aatttattgc gaaacagaaa cagccgctgg
    12481 cctttacatg ttggtatcca cagttcgact tcatatgcat tgccgcttcg aaaaaataca
    12541 cggttattgc gcctggatgc cgcagcttca cgacggctca taaacagttt aaacacgctt
    12601 tggccaatga cgtcgtgttc tttcaaccca gtgtaatctt cacataaccg attgaagcgt
    12661 tggatattcc cccggctgtc gagaatcact attgcggaat gtgcttcaga aactacctgc
    12721 tcagcaaagg aaagcccgtg tgataaatca cgagcaactg ccggtgtgtc atgccatgca
    12781 gacgcgttgc cagcccattc ccgtttattg atttttcgtc ctaccagatg cacagaaaga
    12841 tcgctctcat cgacggtcag actcatcatc aggctggagg tgatgaccgt catttccctg
    12901 atgcgagcag cctgttcggc agataactgc aaagtacgat caggttctgt ggtttcggtg
    12961 gtagaaaagc gcaaaacatc gctgctttcc gtcaaccgcc agtatggatt gtgcgatccg
    13021 agaaagttgt acaacgttgt ggactcccta acggttttca tgatgcatat cctccggtta
    13081 aataaaagga acaacat
//
LOCUS       DADKRT010000119        13092 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.120, whole genome shotgun sequence.
ACCESSION   DADKRT010000119 DADKRT010000000
VERSION     DADKRT010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13092
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.120"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            4..1632
                     /locus_tag="JQ356_002875"
     CDS             4..1632
                     /locus_tag="JQ356_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001381416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HAY4622902.1"
                     /translation="MFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMS
                     GGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKQSVEGIA
                     TAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAED
                     LSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLIQETERRRRERNEVEQDVEV
                     AVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRI
                     LAERQIQETEIEREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQS
                     QAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAE
                     KEAAEMQAAAIVKLAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPA
                     VIEKSVEPMKSIDGIKIIQVDGLNRGSAAGDANTGNVGGGNLAEQALSAALSYRTQAP
                     LIDSLLNEIGVSGGSLAALTSPLTSTTPVAENVE"
     gene            1871..1930
                     /locus_tag="JQ356_002876"
     CDS             1871..1930
                     /locus_tag="JQ356_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY4622903.1"
                     /translation="MMKLVIILIVLLLVSFAAY"
     gene            2247..2306
                     /gene="ibsE"
                     /locus_tag="JQ356_002877"
     CDS             2247..2306
                     /gene="ibsE"
                     /locus_tag="JQ356_002877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsE"
                     /protein_id="HAY4622904.1"
                     /translation="MMKFVIILVVLLLLSFPTY"
     gene            complement(2426..3859)
                     /gene="hldE"
                     /locus_tag="JQ356_002878"
     CDS             complement(2426..3859)
                     /gene="hldE"
                     /locus_tag="JQ356_002878"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HAY4622905.1"
                     /translation="MKVTLSEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
                     TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV
                     QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
                     LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
                     LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
                     GEVLVLNFEDGCSTTNIIKKIQQDKKG"
     gene            complement(3907..6747)
                     /gene="glnE"
                     /locus_tag="JQ356_002879"
     CDS             complement(3907..6747)
                     /gene="glnE"
                     /locus_tag="JQ356_002879"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HAY4622906.1"
                     /translation="MKPLSSPLQQYWQTVVERLPEPLAEKSLSAQAKSVLTFSDFVQD
                     SVIAHPEWLTELESQSPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIA
                     WAQTLALVTEESILQQLSHLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF
                     VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLSVIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
                     QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
                     QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLM
                     PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA
                     SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ
                     LLRIAAADIADTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNDREGRG
                     FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFN
                     TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ
                     LTAHFDAVRREIMMLPREGKTLQTEVREMREKMRAHLGNKHRNRFDIKADEGGITDIE
                     FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
                     ALQELPGHVSEDCFTAERDLVRASWQKWLVEE"
     gene            complement(6770..8071)
                     /locus_tag="JQ356_002880"
     CDS             complement(6770..8071)
                     /locus_tag="JQ356_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HAY4622907.1"
                     /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
                     DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEV
                     WPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELE
                     LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
                     ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKA
                     STHLRDLLTQCEATIASAVSAVTAVYSTKTAMAKLALTEWLVSKAWQPFLDAKAQSKM
                     SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQ
                     AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
     gene            8313..8933
                     /locus_tag="JQ356_002881"
     CDS             8313..8933
                     /locus_tag="JQ356_002881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HAY4622908.1"
                     /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY
                     RLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV
                     KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV
                     QLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPTRKRKERWMN"
     gene            8997..10235
                     /gene="cca"
                     /locus_tag="JQ356_002882"
     CDS             8997..10235
                     /gene="cca"
                     /locus_tag="JQ356_002882"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused tRNA nucleotidyltransferase/2',3'-cyclic
                     phosphodiesterase/2' nucleotidase/phosphatase Cca"
                     /protein_id="HAY4622909.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD
                     NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLM
                     REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA
                     PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
                     GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR
                     VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL
                     TRRRIAAVASWKEQRCPKPD"
     gene            complement(10392..11213)
                     /gene="bacA"
                     /locus_tag="JQ356_002883"
     CDS             complement(10392..11213)
                     /gene="bacA"
                     /locus_tag="JQ356_002883"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY4622910.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
                     VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
                     LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
     gene            complement(11304..11672)
                     /gene="folB"
                     /locus_tag="JQ356_002884"
     CDS             complement(11304..11672)
                     /gene="folB"
                     /locus_tag="JQ356_002884"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HAY4622911.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
                     DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
                     ARAANVGVIIERGNNLKENN"
     gene            11777..12394
                     /gene="plsY"
                     /locus_tag="JQ356_002885"
     CDS             11777..12394
                     /gene="plsY"
                     /locus_tag="JQ356_002885"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HAY4622912.1"
                     /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
                     NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
     gene            complement(12407..>13092)
                     /gene="ttdR"
                     /locus_tag="JQ356_002886"
                     /gene_synonym="dan"
     CDS             complement(12407..>13092)
                     /gene="ttdR"
                     /locus_tag="JQ356_002886"
                     /gene_synonym="dan"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TtdR"
                     /protein_id="HAY4622913.1"
                     /translation="VDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQV
                     HFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSL
                     QELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIML
                     RSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLVAWCQQRLG
                     KPDEGYQVM"
BASE COUNT         3165 a         3679 c         3279 g         2969 t
ORIGIN      
        1 tggatgttta ccgcgattat tgccgtatgc attctgttta ttattggaat tattttcgct
       61 aggctctatc gtcgcgcttc ggcagagcaa gcttttgttc gtactggttt aggtgggcaa
      121 aaagtggtga tgagcggtgg cgcaatcgtg atgccgatct ttcatgaaat aatccccatc
      181 aatatgaata ctctgaagct ggaagtcagc cgctcaacca ttgatagcct gattacgaaa
      241 gatcgtatgc gtgtcgatgt agtagtcgct ttctttgtac gggtaaaaca gtctgtagaa
      301 ggcatcgcca ctgcggcgca gacgttgggg caacgcacgc tatcaccaga agacttacgt
      361 atgttggttg aagataaatt tgtcgatgcc ctccgtgcaa cagctgcaca aatgaccatg
      421 catgagttac aggatacccg cgagaacttc gtgcagggag tacaaaatac tgtcgcagaa
      481 gacctgtcga aaaacggtct tgagctggaa agcgtttcac ttaccaactt taaccagacc
      541 tcgaaagaac atttcaatcc gaacaatgcc tttgacgccg aaggtttaac caaactgatt
      601 caggagacgg agcgccgtcg tcgcgaacgt aacgaagttg aacaggatgt agaagttgcg
      661 gtgcgtgaga aaaaccgtga tgcactttcg cgcaagttgg agattgaaca acaagaagcg
      721 tttatgacgc ttgagcagga gcagcaggtt aaaacccgta ctgccgaaca gaatgcacgt
      781 attgcggctt ttgaagctga acgtcgtcgt gaagcagagc agacgcgaat tctggctgaa
      841 cgacaaattc aggaaacgga gatcgagcgc gagcaggccg tccgctcaag aaaggttgag
      901 gctgaacgtg aagttcgtat taaagagatc gaacagcagc aggtcaccga aatcgccaac
      961 cagacgaaat cgatcgctat tgccgccaaa tcggaacaac agtcccaggc agaagcgcgt
     1021 gctaaccttg cactcgcaga agcagtaagt gcgcaacaaa acgtagaaac cactcgccag
     1081 accgcagaag ccgatcgtgc taaacaagtt gccctaatcg ctgccgcgca ggatgcagaa
     1141 accaaagcgg ttgaactgac cgtgcgggcg aaagcagaaa aagaagccgc agagatgcag
     1201 gcggcggcta tcgttaagtt agccgaagct acacgtaaaa agggtctggc ggaagcagaa
     1261 gcacaacgtg cgctgaacga tgctatcaac gtactttctg atgaacaaac cagccttaaa
     1321 ttcaaactgg ccttgttgca ggcgctacct gcggtaatag aaaaatccgt tgagccgatg
     1381 aaatctattg acggtatcaa gattattcag gtcgatggtc tgaatcgtgg cagcgctgcg
     1441 ggtgatgcaa acacgggtaa tgtggggggc ggaaacctgg cggaacaagc attatcagcc
     1501 gctctctctt accgcacaca ggcaccgctg attgactcct tgctcaatga aattggcgtt
     1561 tcaggcggct cactggcggc attgacttca cccttaacct caacaactcc cgtcgccgaa
     1621 aacgtagaat aaattttcag ctatgaacgt ccctggcaca aaaagccggg gattttttat
     1681 atctgcgttc cgctaaaaac tgcaaatgat caggtcgttg caacgttttg cgtgaccgct
     1741 cggggaaggc aaaactgcct ctgggaaagc gttgctcgag gtccggcgct catcaacaat
     1801 cggggagtca gcaaagggct gaaacgggaa agcccctccc gaggaagggg ccttacagaa
     1861 ggaaagggtt atgatgaagc tcgtcatcat actgattgtg ttgttactcg taagtttcgc
     1921 agcttattaa cagccaatca gaggggggag aaatcctccc tcacccttgt tcctttactt
     1981 taggttgaaa aaaaatcagc gtcaagaagg tttcattaac acatatccct agcccaaaaa
     2041 gccggggatt ttttatatct gcgttccgct aaaaggtgca aatgctcagg acgttgcagc
     2101 gttttgcgtg accgctcggg gaaggcaaaa ctgcttcagg gaaagcgttg cgcggggtcc
     2161 ggcgctcatc aacaatcggg gagtcagcaa ggggctgaaa cgggaaagcc cctcccgagg
     2221 aaggggcctt atagaaggaa agggttatga tgaagttcgt catcatactg gttgtgttgt
     2281 tactgttaag tttcccgact tactaacaac tgatcagagg ggggagaaat cctcccttac
     2341 ccttgttcct ttactttagg ttgaaaaaac aacagcgtca ataggcctgc ctgctacgaa
     2401 gcgagatctg tgaaccgctt tccggttagc cttttttatc ctgttggatc ttcttgatga
     2461 tgttagtggt cgagcaaccg tcttcgaagt tgagcaccag cacttcgccg ccgttggccc
     2521 agacttcttt actcccggcg atctcttctg gtttatagtc gccgcccttc accagtaaat
     2581 ctggcaggat cccggcgatc aagcgctgcg gcgtgtcttc ttcaaacgac accacccagt
     2641 cgaccgcttc cagtgcgccc agcacaatca tacgctgttc gagcgggtta acggggcggg
     2701 aatccccttt cagccgtttg gtggaggcat cgctgttcac agcgacaatc agacggtcac
     2761 ccagtttgcg agcatttgcc agataggaga cgtgcccggc atgcaggatg tcaaagacac
     2821 cgttggtcat taccaccttt tcgccgcgtt tacgcgctgc cgctacggcc agcttcagtt
     2881 cctcttcggt catcacgcca aagccggtat ctgcgcgccc acgcactgca ttttccagct
     2941 cgatcggcga aaccgtggag gttcccagtt tgccgaccac cacgccagcc gccgcattgg
     3001 caaagaagca ggcttcttcc agcgaattac ccgctgccag cgttgccgcc aggacgccaa
     3061 tcaccgtgtc gcccgcaccg gtaacgtcat acacttcctg cgcctgggtt ggcatatgca
     3121 gcggcgcttt acccggttgc agcagcgaca taccctgttc ggaacgggtc actaacagag
     3181 ccgagagttc gtaatcggca atcagtttca tgccgcgctc aacaatctct tcttcggtct
     3241 tacatttacc gacaacagct tcaaattccg agagattcgg cgttaacagc gtagcgccgc
     3301 ggtagcgctc aaaatcggta ccttttggat caatcagcac cggaacgccc gctttacgcg
     3361 ccagttggat catctgctgt acgcttgcca gcgcaccttt ggcgtagtca gaaagcacca
     3421 gcgcgccaat cgaactcagc gcctgattaa tccgctcgtg cagcggctgc ggatcaacgc
     3481 cttcgaaacc ttcttcgaaa tccagacgga tcagctgttg gttgcgggaa agtacccgta
     3541 atttggtgat ggtcggatgc gtcggtacag aaacgaagtc gcatttgacg ttgacgtcgg
     3601 ccagagattt actcagcgcg cgcgctgcat cgtcaatgcc cgtcaacccg accaggcgtg
     3661 cattagcacc gagagaagcg atattcatcg ccacgttagc cgcgccgccc ggacgttctt
     3721 cgatggtatt cactttaacc acgggcaccg gcgcttccgg cgagatacgg ctggtgggac
     3781 cgtaccagta acgatccagc attacatcac caaccaccat cactcctgca cgttcaaact
     3841 ctgacagcgt tactttcatt cctgtctcct gagagattca aaatttgcgc gcgataatac
     3901 catacttcat tcttccacca gccacttctg ccagcttgcc cgcaccagat cacgctctgc
     3961 ggtgaagcaa tcctccgaca catggcccgg caattcctgt aatgccagat gatgaagttc
     4021 atcgcgcagc gtcgtgtaag cacgggtcag cgccatcgct tcctgctctt ccataatgtc
     4081 gttttgcgcc agcagctcca gaatacgcac gttgtctgac cagcgcgtta acttcggttt
     4141 ttcatgagcg tagcgcaaca ccagatattg ggtaataaat tcgatatcgg taattccgcc
     4201 ttcatcggct ttgatatcaa agcgattacg atgtttattg ccgagatgag cgcgcatttt
     4261 ctcgcgcatt tcccgcactt ccgtttgcag agttttacct tcacgcggca gcatcataat
     4321 ctcgcgacgc actgcgtcaa agtgcgcggt gagctgcgga tcgccgtaca ctacacgcgc
     4381 acgcaccagc gcctgatgct cccacgtcca ggcctcgttt ttctgataat cagcaaatgc
     4441 ttctgcggat gtcaccagca ttcccgccgc cccggacgga cgcagtcgtg catccacttc
     4501 atacaaaatg ccggaagagg ttcgcgtatt gaacagatgc ataatgcgtt gcgccagacg
     4561 cagataaaac tgtcgcccgt cgatttcccg ctcgccgtca gtcatcgcat ccattgggca
     4621 atcatggagg aagatcaggt caagatcgga actgtagcct aactcccagc cgcccagctt
     4681 gccgtagccg accaccgcaa aaccacggcc ttcgcgatcg ttgaggtgat ttggcttacc
     4741 gtagcgggcc accatttgaa cccacgcctg ctgaacgacg gcatctatca tagcctctgc
     4801 cagccaggtt aagtgatcgc tcactttcat caccggtagc gtatcagcga tatccgctgc
     4861 ggcgatgcgt aacagctgcg cctgtttgaa ctgacgcagc gcctcaagct gttgctcttc
     4921 gtcatcttcc ggcacgcgca gcaaatactg gcgcaactca tcgcggtagg catcggtcgc
     4981 cgtcggctgg taaagagtgt ttggatcgag caattcatcc agcaataatg gataacgcgc
     5041 cagctggctg gcaatcatcg gcgatgcggc acacagagaa atcaaatgtt taagcgccgc
     5101 agggaattca ctgagcaatt ctaaataggt ggtgcgggta acaatcccca ccagcaaggc
     5161 ggtaatgcgc gacagcgtaa cggcagcgtc ttcacgcgca cagacatcac ttagcagatg
     5221 tggcatcaga tggtcgagca cctgacgtcc tcgcggcccg atagtacgct tatccagctc
     5281 tttgcggaaa tcagcaatca gcgttaggac ctgtttgcga tcatcctcgc taagatgcgc
     5341 cagcactggc gtagtgtcat cttcctgcaa cgcatcctgc cacagctcac gccactgttc
     5401 cgacagcgac tcttcctgag tttcactttc gtcgtcgcca atcaattcat taaacacccg
     5461 gcgcacattg gtcatatgtg cggtcagcgc cccggtcagt tgcggccagt cagcaaagtc
     5521 catcgcccac gccagccgcg cacggttaag ctcatcagaa ggaagcgttt gggtttgttc
     5581 gtcgttaatg ctttgcagca ggttttccag acgccgcagg aacagatatg ccactcgcaa
     5641 ttgttcagca tcgttttcag aaagcagatg cagcgcggca atgacgctga gcgttggtag
     5701 taaagagcgc gactgcagcg acggttcgcg cccaccgcga atgagctgga acacctgaac
     5761 gataaattca atttcgcgaa tgccgcctgc gccgagtttg atattgtcgg tcaaaccacg
     5821 tcgacgcact tcacgggcaa tcatcccttt catgttgcgc agcgactgaa tcacgctgaa
     5881 atcgatgtaa cgacggaaaa caaacgggcg cagcatcgca cgcaactcgt tagcatagac
     5941 gccttcgcta tcgcccataa tccgcgcctt gaccatcgcg taacgctccc agtcgcgccc
     6001 ctgctcctgg taataatcct ccaacgcggc aaagctcagc accagcgggc cactttcgcc
     6061 aaacggacgc agccgcatat ccacgcgata gacgaagcca tcctgcgttg gttgatccaa
     6121 cactttaatc agccgctgcc ccatgcgggt aaaaaactgc gcgttatcca gttcccggcg
     6181 tccgccctgc gtacaaccat gttccggcca ggcaaaaatc agatcgatat ctgaggagaa
     6241 attcagttcc ccaccgccca gcttacccat gcctaaaatc agcagcggtt gcgcttcgcc
     6301 ctgcgcattg cacggcgttc cccactcgcg gcagcaagcg tcatacagcc agtcacgcgc
     6361 ggcgacaatc agcgtctccg ccagatggct gagctgctgc aatatactct cttcagtaac
     6421 caaagccagc gtttgcgccc aggcgatgcg caccataatg cgccgccgga atagccgcag
     6481 ctcgcgcatt aacccggctt cgtcactcac attgctgagc gcctcctgca accatgccgc
     6541 gtaatgctgc cattcatcag cctgcggcga ttggctttcc agttccgtca gccactctgg
     6601 atgcgcaatc acgctgtcct gcacaaaatc actgaaagta agtactgact tcgcctgtgc
     6661 gctaagtgat ttctcggcta aaggctctgg cagccgctca acaacggtct gccagtactg
     6721 ctgtaacggt gaagagagcg gcttcataag cgattttatc cttgcctgat taacgttttc
     6781 cgctgtgcaa ccagaacggt tcctgattgt ttgcctcatt acggaaatgt tcaatttcaa
     6841 tgcgttgccc ggtcgcaata gcgtgacgca gcccctgcca gttctccagc caggcttgcg
     6901 cgacgacagg atcatagtaa cccgccagca acagtattga gtcaatatca cgcgtcagac
     6961 gtggcaactg gtcacggtag cgatcgccca acggctggca gaaaacgctt ttcagttcag
     7021 cggcatggcg ggaaagatgg atatcggcaa agcgtttgaa ggaatcgctc attttactct
     7081 gcgctttggc atctaaaaac ggctgccagg ctttgcttac cagccattcg gtcaacgcca
     7141 gcttcgccat tgccgttttg gtagagtaga ccgccgtcac ggcagaaacc gcagaagcga
     7201 tggtcgcttc gcattgagtc agcaaatcgc gtaagtgagt gctcgctttg cgcggcacaa
     7261 taccaccgaa cagcatcagt gtatgacgga ccagaccaat ggctgccagc acctgttctt
     7321 tcgccgcatc gttgccgcgt acccacagtt cttcatgata ctgccattgc gctaacgcca
     7381 gctcgagcgc cgcttccagc ccctgttcca catcggcttt tgccgcaaca tgcaaaatgg
     7441 tggtcggttt gatttcacgc gccggattgc cctgcgccag atgatagcca cgcgccgctt
     7501 tgctcaggct gccctggcgt aatccggttt gcgataccag ttggttcgcc agtttcagca
     7561 ccgcgcgcgt gtcgccgcta agcagttcca gttccagctc acagataggt tcagcaaatt
     7621 cccccgcttt cacctccccc tgatcgagag cgatttcaat tcggctgtca tcgaccgcca
     7681 ccagccattt ttcgcgataa aaatcggtgc tgaacagcgg ttgtacgcgg gaagcgagat
     7741 cggcgggcaa ttcgccgttc ggccagactt ccgtcggtaa ctgcgccagg tcgagcgtcg
     7801 gttcgctcaa cgccacgtta tattccgggc gctggtgtaa gccgcctgtc actcttcctg
     7861 caactttcat ggtcatctca tagcgaccgt tttcgccacg aatacgtaag cccatatcgt
     7921 gcccacgcag ccagttatcc ggcgtttcgt agtaaatatt cagcaactgc acggggtcat
     7981 ggtgctcgcc gcccagcgta ttgagatggt cacgcaacgc ctcaacggca ctgtgattaa
     8041 caataaactt taattcgatt tcctgagcca tggcctttac ttatcggtta tgtcacataa
     8101 gtgacgatga acggcgaact taatgcgatc ttttttgtca gtagatagta ttttgcgcca
     8161 aattgccatg caacgggcaa tttgacgggc gtaaaagttt gaagcagtgg caagacctga
     8221 cacagaggat tccgattgat gtcgaatgct ttgcgtagcg acactgatgc cactactatc
     8281 gttccacttt ccatgacaat aacgacagcc tgatgccaaa attacgcctg atcggattaa
     8341 ctttactcgc acttagcgcc actgccgtct cacacgctga agaaacgcgc tatgtttctg
     8401 atgaactgaa tacctgggtc cgtagcggtc cgggagatca ttatcgcctc gtgggcacgg
     8461 ttaacgccgg cgaggaagtg accttattac aaactgacgc caacaccaat tatgcccagg
     8521 tgaaagacag ctctggccgt accgcctgga tcccgttgaa acaacttagc actgagccaa
     8581 gcctgcgctc ccgtgtgcca gatctggaaa atcaggtcaa aaccctgacc gataaactca
     8641 ccaatatcga taacacctgg aatcagcgca ccgcagaaat gcagcaaaaa gtggcgcaga
     8701 gcgacagcgt gatcaacgga ttaaaagaag aaaatcagaa attgaaaaac gagctgattg
     8761 tcgcgcagaa aaaggtcgat gccgccagcg tacagctgga tgacaaacag cgcaccatca
     8821 tcatgcaatg gtttatgtat ggcggtggcg tgctggggct tggcttgctg ctcggtctgg
     8881 tactgccaca cctgatccca acgcgcaaac gcaaagagcg ctggatgaac taaatcgcct
     8941 tcttcgttgc actgtcttat tattaggaat tgtgtatttg acgaagggat gatggcgtga
     9001 agatttatct ggtcggtggt gctgttcggg atgcattgtt agggctaccg gtcaaagaca
     9061 gagattgggt ggtggtcggc agtacgccac aggagatgct cgacgcgggc taccagcagg
     9121 taggccgcga ttttcctgtg tttctgcatc cgcaaacgca tgaagagtat gcgctggcac
     9181 gtaccgaacg gaaatccggt tccggttaca ccggttttac ttgctatgcc gcaccggatg
     9241 tcacgctgga agatgatctt aagcgtcgcg atctgaccat taatgcgctg gcccaggacg
     9301 ataacggcga gattatcgac ccgtacaacg gtctgggcga tctgcaaaat cgtctgttgc
     9361 gccatgtttc ccccgctttt ggcgaagatc cgttacgcgt tctgcgcgtg gcgcgttttg
     9421 ctgcgcgtta tgcccacctc ggttttcgta ttgccgatga aactctgacg ctgatgcgcg
     9481 agatgaccca tgcgggtgaa ctggaacacc tgacgcctga acgggtatgg aaagagacgg
     9541 aaagcgccct caccacccgc aatccccagg tgttcttcca ggtactgcgc gattgcggtg
     9601 cacttcgcgt tttattcccg gaaattgacg ccctgtttgg cgttccggcc cctgccaggt
     9661 ggcatccgga aatcgacacc ggtattcata ccttaatgac gctctcaatg gcggcgatgc
     9721 tgagtccgca ggttgatgtc cgtttcgcaa ctttatgcca cgatctcggt aaaggactga
     9781 cgccgccaga actttggccg cgtcatcatg ggcatggccc ggcgggtgtt aagttagtgg
     9841 aacaactatg ccagcgtctg cgcgtgccaa atgaaattcg cgatttagcc agactggtgg
     9901 ctgagtttca cgatctcatc cacaccttcc caatgctgaa cccaaaaacc atcgtcaaat
     9961 tatttgattc catcgatgcc tggcgtaaac cgcagcgtgt cgagcaactg gcgctgacca
    10021 gcgaggctga cgtacgcggc agaaccggtt ttgaatcagc ggactacccg caaggccgtt
    10081 ggttgcgcga agcctgggaa gtggcgcagt cagtgccgac aaaagcggtc gttgaagcgg
    10141 gatttaaagg tgtggagatt cgcgaggagc tgacccgacg gcggattgcg gcggtagcca
    10201 gttggaagga acaacgttgc ccaaagcctg actgagtata aaactaaacg ttaacacgaa
    10261 ccatcccctc gccccttcgg ggagagggtg aggggaacag accagcaccg gtgcgaacaa
    10321 tcacccccac cccggccctc tccctacaga gcgagggaga aaaccaggcc tgctcccgaa
    10381 ccttttctca atcaaaagaa cacgacgtac accgcagccg ccacaataaa gcgataaatg
    10441 gcgaacggga taaacgaaat gcgcttaatc aattgcagga aggttttaat cgctatcagc
    10501 gccaccacaa aagcggtgat aaacccaacg gcaaacatcg ggatatcgcc ggttgtcagg
    10561 aagccccagc ttttgtagag atcgagcgcc gttgcgccca tcatcatcgg taccgccagc
    10621 aggaacgaga actcggaagc agcgtaacgg ctcacgccca tcagcatccc acctgaaatg
    10681 gtggccccgg aacgggagaa acccggccac agcgccagac actggaaaca gccaatcata
    10741 aacgcctgac gataggtcat atcatcaaga cccggcgcac gcggctcttt cggcttcagg
    10801 cattcggcgg caatcagcaa caaaccgcca acgaccagtg catacatcac atttatcggg
    10861 ttaaacaatg acttaatcgt gtcgtggaac aacagcccca gtaccaccgc cggaatcatc
    10921 cccagcaaaa tgtggatcag cgttaaacga cctttgcttt ctccttcgtg ctgcaacggg
    10981 cggccaaagt ggatgccaat caggccaaac agacgccgcc agaacatcac tactaccgcc
    11041 agaattgatc ctaactggat cacaacttca aaggttttcg ccgtgtcgcc ctcgaacccc
    11101 aacaagtgac cgacaataat catatggccc gtgctggata ccggcagaaa ttctgtcaat
    11161 ccttcgacca cacccaatat tgccgctatc agcagcgagt gcatatcgct catcaataaa
    11221 cccctaaatt attaaaatgt accgcttgtc cggactactg cagtaagacc aggttataac
    11281 cgtttggttt aacagctgta aaattaatta ttttctttca gattattgcc acgctcaatg
    11341 attacaccaa cattcgccgc ccgcgccact gcgcctggct tgctgagttt gatgcgcacc
    11401 cacggcgagt tgaagcgtgc taacagcagc tccgccacct cttcagccac gcgttccacc
    11461 agcgcaaaac gcgccccctc gacgtggctg accaccgttt ctgcaatgtc agcgtaactg
    11521 aggcaatccg ccacatcatc acttttcgcc gctttacggt tatcccatgc catttcgata
    11581 tcgaacacta acttctgttc gatggtctgt tcccagtcgt aaacaccaat agtggtgatt
    11641 accgaaagtt gctctataaa tacaatatcc atcacgtcct gcctgctttt tggctaaccg
    11701 gataccactt ccggcgaaat gtgcgtatta tccacagatt catcgttgaa cacgaatttt
    11761 caaaacggaa cagcttatga gtgcaatcgc gcctggaatg atcctcatcg cgtacctctg
    11821 cggctccatt tccagtgcca ttctggtttg ccgcttgtgt gggctgcccg atccgcgaac
    11881 cagcggctcc ggcaatccag gcgcaaccaa tgtgttacgt atcggtggca agggagcagc
    11941 cgtagcagta ctgattttcg acgttctgaa aggaatgttg cccgtctggg gcgcgtatga
    12001 attaggtgtc agccccttct ggctaggctt aattgccatc gccgcctgtc ttggacacat
    12061 ctggcccgtt ttcttcggat ttaaaggagg aaaaggcgtt gctaccgctt ttggtgccat
    12121 cgcacccatt ggctgggatc tcaccggagt aatggcggga acctggttac tgaccgtgct
    12181 attgagcgga tactcgtcgc tgggagcgat tgtcagtgca ctgattgctc cgttttatgt
    12241 ctggtggttt aagccacaat tcaccttccc agtttcgatg ctctcttgcc tgatcctgct
    12301 gcgtcatcat gacaacatcc agcgtctgtg gcgtcgtcag gagacaaaaa tctggacgaa
    12361 attcaaaaga aagcgcgaaa aggatcccga gtgatttctg gtggatctac atgacctgat
    12421 agccttcatc gggcttgccc agccgttgct ggcaccatgc caccagaaat tccacgcaga
    12481 cacgtaattt catgctgcga tagagcggct cccggtaaac agcccagata ttggcgcttt
    12541 gtgcatactc cggcaatact tgcaccagtt tgccactctc cagaaacggc aacacatccc
    12601 actcggaacg cagcataatc cctttgccct ccagcgccca ttgcaacact atctcgccgc
    12661 tattggagga aagatgcccg ctaaccttca ccgatttttt ctcctgaccg ttccccaact
    12721 cccatattcc gtgggtcata tcgcgctctt tggtcaccag acagtcatga cgacttaatt
    12781 cctgtaatga ttgtggctgc ggatattttt gcagatactc aggtgctgcg cataatattc
    12841 ttttattttt cgttaacaga tgcgcaatat aataatcagg aatttcgtca ttaatacgaa
    12901 tatccagatc aatattatcc tgcactaaat caatttgccg atcgaacaat tcaaaatgca
    12961 cctgtaactc aggataattg cgcataagtt cggtaatggc tggcgcaata tggctgcgcc
    13021 caaaaccaaa actgcaacca atacgaatca tcccctccgg gcgcgttttg atttgcgtga
    13081 cgtcatcgac ca
//
LOCUS       DADKRT010000120        12952 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.121, whole genome shotgun sequence.
ACCESSION   DADKRT010000120 DADKRT010000000
VERSION     DADKRT010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12952
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.121"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(234..1574)
                     /gene="fadL"
                     /locus_tag="JQ356_002887"
     CDS             complement(234..1574)
                     /gene="fadL"
                     /locus_tag="JQ356_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708225.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HAY4622914.1"
                     /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
                     WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDS
                     NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG
                     LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST
                     SGNTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF
                     WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
     gene            1946..2230
                     /locus_tag="JQ356_002888"
     CDS             1946..2230
                     /locus_tag="JQ356_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 family protein"
                     /protein_id="HAY4622915.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTL
                     AALTEKARSVESEPCKISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR"
     gene            2410..3720
                     /gene="fadI"
                     /locus_tag="JQ356_002889"
     CDS             2410..3720
                     /gene="fadI"
                     /locus_tag="JQ356_002889"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HAY4622916.1"
                     /translation="MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
                     SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
                     DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
                     DGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTM
                     SDLTLIDMHEAFAAQTLANIQLLGSERFACEVLGRAHATGEVDDSKFNVLGGSIAYGH
                     PFAATGAWMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            3720..5864
                     /gene="fadJ"
                     /locus_tag="JQ356_002890"
     CDS             3720..5864
                     /gene="fadJ"
                     /locus_tag="JQ356_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HAY4622917.1"
                     /translation="MEMASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIK
                     QLRENKELRGVVFISAKPDNFIAGADINMIGNCKTVQEAEALARQGQQLMAEIHALPI
                     PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
                     VSTTLEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERI
                     LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
                     AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
                     VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
                     IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP
                     VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
                     MLTKGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVAERCVM
                     LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
                     TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
     gene            6067..6552
                     /gene="sixA"
                     /locus_tag="JQ356_002891"
     CDS             6067..6552
                     /gene="sixA"
                     /locus_tag="JQ356_002891"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HAY4622918.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE
                     IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
                     VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
                     I"
     gene            7227..7487
                     /locus_tag="JQ356_002892"
     CDS             7227..7487
                     /locus_tag="JQ356_002892"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY4622919.1"
                     /translation="MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCS
                     IVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDT"
     gene            7494..7790
                     /locus_tag="JQ356_002893"
     CDS             7494..7790
                     /locus_tag="JQ356_002893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4622920.1"
                     /translation="MTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSY
                     KSGMGIDQKIVKDTSTNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL"
     gene            7872..10514
                     /gene="yfcU"
                     /locus_tag="JQ356_002894"
     CDS             7872..10514
                     /gene="yfcU"
                     /locus_tag="JQ356_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein YfcU"
                     /protein_id="HAY4622921.1"
                     /translation="MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKG
                     DTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELV
                     AQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
                     PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNY
                     QHTRSNDDDEFSGDETQKKWEWSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGG
                     SVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSV
                     SGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQIRYKIMMGRPQEWGHHVEGEFFSGA
                     EASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
                     GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMVRTGNDKEM
                     YTATYNQNFRDAGVSVYLNYTRHTYWDREEQINYNIMLSHYFNMGSIRNVSISMTGYR
                     YEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGT
                     SDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMG
                     GTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNRLPENAEAT
                     QSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDD
                     GNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPITSPAV
                     KPAIQEQTQRVTPTEPPTSISVNQ"
     gene            10534..11286
                     /locus_tag="JQ356_002895"
     CDS             10534..11286
                     /locus_tag="JQ356_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000482750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HAY4622922.1"
                     /translation="MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDK
                     SISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQVKVQGLPDI
                     NKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV
                     TLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPV
                     LTYINDYGARMPLYFKCTGNSCQVDEEQSRKG"
     gene            11302..11811
                     /locus_tag="JQ356_002896"
     CDS             11302..11811
                     /locus_tag="JQ356_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001733155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4622923.1"
                     /translation="MSHKFVAGAGLLVLAGWGISGLAVAGSDIKQVDLTLRILVDGPP
                     PCSVKGSAVKFGNVIINRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETV
                     LSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNA
                     TMTMVVDYQ"
     gene            11808..12296
                     /locus_tag="JQ356_002897"
     CDS             11808..12296
                     /locus_tag="JQ356_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4622924.1"
                     /translation="MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIE
                     VQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVP
                     GFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
                     YQ"
     gene            12293..12832
                     /locus_tag="JQ356_002898"
                     /pseudo
     CDS             12293..12832
                     /locus_tag="JQ356_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416836.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
BASE COUNT         3258 a         3088 c         3441 g         3165 t
ORIGIN      
        1 gtatcctgga aatgcagaaa agtaaactct ttgagaagga cgagcagaac gcctgaaaat
       61 atgcctttcc cttcaggttt gtctgtggat accgcttatt gatttgaaag ggcaagctgc
      121 caacaggctg tttgcaaaac tcaggaggta agcaatgagg acactacttt cggtgaagtg
      181 ggggagttaa agtcacctgc tatgcaggtg actttatcca ggcgaacgcg ttatcagaac
      241 gcgtagttaa agttcgtacc gaacagccag gctttacctt cagactcgaa ctggtatggg
      301 ccttcgttaa ttttcacgct ctgaccgtgc atataagaaa caccaacgtc gactgaagca
      361 tctttattaa atgcgtaagt cgtacctgca ctcagccaga aacggtcctg gtccggaatg
      421 gagatagaac gattctgagc cggaactggg ctgtcatcaa aggcgatacc ggtacggaag
      481 gtccagttat catcgtagta ataagtggta cccaacgcga tgcggtaagc atctttaaag
      541 ccttcatgtt tctggaacag cgtgttgcca ctggttgagg tcgctttcag ctgctggaac
      601 tgactccagc tggtgtaagc caggctatag tgaatcgccc actgtggatc aacacggtta
      661 taacctgaca cttcccacat ttcaggcagg ttcagcgtca gataacccga ttgcgttgcg
      721 ccacctgtcg cggtaggaat tggcaaaccg tagttattaa acgcacgatt aagatcgctg
      781 ctgtagttac ctttgaagtc aattttcact tcagaacggt aggtcagtgc atagcggtta
      841 tttttatcca gttcatacag gattccggcg ttccagccaa agccccactg gttaccgttc
      901 agatgagcga ttttggtatt actgtcgata ccgttggcgg tagctgccaa tgcttgccct
      961 tgaggagttt gcccggcagg agattgcata atctgaccag caaccaactg ccccagatcg
     1021 cctgcgaaac gttcaatttt cgcgcgagcg tagacggcgt tgaaaccaag accaaagctc
     1081 catgcattat ttaagcgata cgcaccgctt aagttcaggt tcatggtttc aaggtcagtt
     1141 gtacccccga cagagccgcc tgcataagta tcattaaact ctgttgccag accatagtta
     1201 gaggtaatag aagcgcccca accaaattgg tcgttaatcg gtgcaacaaa gtgcatgttc
     1261 ggaacccatg ccgtaggcgc gatgttatcg gctttcaggc tacgaccaga cggagacgtt
     1321 ccgctgatat tcacatccgg gtcaatataa accgcacccg cagaaaatgt cgggcggtca
     1381 aacatggtaa tcaatgcggg gttacggcta acgttacctg catcatcggc aattgcgcct
     1441 tcccctgaat aagcccggcc caggccagag gaagaaaatt cgtttaactg aaagcctgcc
     1501 gaccaggcct gggtggagat aagtgccact gcgactgcga gagcagactt tgtaaacagg
     1561 gttttctggc tcatgaccat aacctcaatg atttattttt atacaaacta tgttacgtgc
     1621 tgtaacagga gcgcgaagtg tagggtctga ggtacatctt agaaatcaga ccagtggcga
     1681 gagtataggt cggaccagct ggaatgttgc aagtatgttt ccatcttttt tcaaatatga
     1741 tctaagaaac gcgatccagc tggcaaaatt tggaggttgc gcactcgcgg attcgggtga
     1801 attttgtttt agatcatttt taagtgtgat ttcggtcact tatccgattt tgcagaatta
     1861 acaactggag cagcactttc cggaagcgta aaatatccac aacgtttatc tggcaccttg
     1921 ggtgcacata cagaggaaat caacgatgag taaatgtagt gctgatgaaa ccccggtttg
     1981 ctgctgtatg gatgttggca ccattatgga caactccgac tgcaccgcgt cttacagccg
     2041 cgtgtttgca aaccgcgcag aagcagaaca aacgctggcg gcgttgactg aaaaagcccg
     2101 tagcgtggaa tccgaaccgt gcaaaatctc cccgactttc actgaagagt ctgacggtgt
     2161 gcgcctggat atcgatttca cttttgcctg cgaagctgaa atgctgatct tccagctggg
     2221 tctgcgttaa ttcctctcgg gtacgttcgc ccctgtcagt tgctggcagg ggcgttttct
     2281 tttctttctc ctgtcttcac tgtgtcatag ctcccacttt cctttttctc cgcttggcta
     2341 aatgtaaaaa aatggttaag actatgatca ggtcagacca ctttatttat ttttttacag
     2401 gggagtgtta tgggtcaggt tttaccgctg gttacccgcc agggcgatcg tatcgccatt
     2461 gttagcggtt tacgtacgcc ttttgcccgc caggcgacgg cttttcatgg cattcccgcg
     2521 gttgatttag ggaagatggt ggtaggcgaa ctgctggcac gcagcgagat ccccgctgaa
     2581 gtgattgaac agctggtctt tggtcaggtc gtacaaatgc ctgaagcccc caacattgcg
     2641 cgtgaaattg ttctcggtac cggaatgaat gtgcataccg atgcttacag cgtcagccgc
     2701 gcttgcgcta ccagtttcca ggcggttgca aacgtcgcag aaagcctgat ggcgggaact
     2761 atccgagcgg ggattgccgg tggggcagat tcctcttccg tattgccaat tggcgtcagt
     2821 aaaaaactgg cgcgcgtgct ggttgatgtc aacaaagctc gaaccatgag ccagcgcctg
     2881 aaactcttct ctcgcctgcg tttgcgcgat ttaatgcccg taccgcctgc agtagcagaa
     2941 tattctaccg gcttgcggat gggtgacacc gcagagcaaa tggcgaaaac ctacggcatc
     3001 acccgagaac agcaagatgc attagcgcac cgttcgcatc agcgtgccgc tcaggcatgg
     3061 tcagacggaa aactcaaaga agaggtgatg actgccttta tccctcctta taaacaaccg
     3121 cttgtcgaag acaacaatat tcgcggtaat tcctcgcttg ccgattacgc aaagctgcgc
     3181 ccggcgtttg atcgcaaaca cggaacggta acggcggcaa acagtacgcc gctgaccgat
     3241 ggcgcggcag cggtgatcct gatgactgaa tcccgggcga aagaattagg gctggtgccg
     3301 ctggggtatc tgcgcagcta cgcatttact gcgattgatg tctggcagga catgttgttc
     3361 ggtccggcct ggtcaacacc gctggcgctg gaacgtgccg gtttgacaat gagcgatctg
     3421 acattgatcg atatgcacga agcctttgca gctcagacac tggcgaatat tcagttgctg
     3481 ggtagtgaac gttttgcttg tgaagtactg gggcgtgcac atgccactgg cgaagtggac
     3541 gatagcaaat ttaacgtgct tggcggttcg attgcttacg ggcatccctt cgcggcgacc
     3601 ggcgcgtgga tgattaccca gacattgcat gaacttcgcc gtcgcggcgg tggatttggt
     3661 ttagttaccg cctgtgctgc cggtgggctt ggcgcggcaa tggttctgga ggcggaataa
     3721 tggaaatggc atcagcgttt actcttaatg ttcgtctgga caacattgct atcatcacca
     3781 tcgacgtacc ggatgagaaa atgaataccc tgaaggcgga atttgcctcg caggtgcgcg
     3841 ccattattaa gcaactccgt gaaaacaaag agttgcgcgg cgtggtgttt atctccgcga
     3901 aaccggacaa ttttatcgcc ggagcagaca tcaacatgat cggcaactgc aaaacggtgc
     3961 aagaagcgga agctctggcg cggcagggcc aacagttgat ggcggagatt catgctttgc
     4021 ccattccggt tatcgcggct attcatggcg cttgcctggg tggtgggctg gagttggcgc
     4081 tggcgtgcca cggtcgcgtt tgtactgacg atcctaaaac ggtgctcggt ttgcctgaag
     4141 tacaacttgg attgttaccc ggttcaggcg gcacccagcg tttaccgcgt ctgataggcg
     4201 tcagcacaac attagagatg atcctcaccg gaaaacaact tcgggcgaaa caggcattaa
     4261 agctggggct ggtggatgac gttgttccgc actccatttt gctggaagtc gctgttgagc
     4321 tggcgaagaa ggatcgccca tcttcccgcc ctctacctgt acgcgagcgt attctggcgg
     4381 ggccgttagg tcgtgcgctg ctgttcaaaa tggtcggcaa gaaaacagaa cacaaaactc
     4441 aaggcaatta tccggcgaca gaacgcatcc tggaggttgt tgaaacggga ttagcgcagg
     4501 gcaccagcag cggttatgac gccgaagctc gggcgtttgg cgaactggcg atgacgccac
     4561 aatcgcaggc gctgcgtagt atcttttttg ccagtacgga cgtgaagaaa gatcccggta
     4621 gtgatgcacc gcctgcgcca ttaaacagcg tgggaatttt aggtggtggc ttgatgggcg
     4681 gcggtattgc ttatgtcact gcttgtaaag cggggcttcc ggtcagaatt aaagatatca
     4741 acccgcaggg cataaatcat gcgctgaagt acagttggga tcagctggag ggcaaagttc
     4801 gccgtcgtca tctcaaagcc agcgaacgtg acaaacagct ggcattaatc tccggaacga
     4861 cggactatcg cggctttgcc catcgcgatc tgattattga agcggtgttt gaaaatctcg
     4921 aattgaaaca acagatggtg gcggaagttg agcaaaattg cgccgctcat accatctttg
     4981 cttcgaatac gtcatcttta ccgattggtg atatcgccgc tcacgccacg cgacctgagc
     5041 aagttatcgg cctgcatttc ttcagtccgg tggaaaaaat gccgctggtg gagattattc
     5101 ctcatgcggg tacatcagcg caaaccatcg ccactacggt aaaactggcg aaaaaacagg
     5161 gcaaaacgcc cattgtcgtg cgtgacaaag ccgggtttta cgtcaatcgc atcttagcgc
     5221 cttacattaa tgaagctatc cgcatgctga ccaaaggtga acgggtagag cacattgatg
     5281 ccgcgctagt gaaatttggt tttccggtag gtccaatcca acttttggat gaggtaggaa
     5341 tcgacaccgg gactaaaatt attcctgtac tggaagccgc ttatggagaa cgttttagcg
     5401 cgcctgcaaa tgttgtttct tcaattttga acgacgatcg caaaggcaga aaaaatggtc
     5461 ggggtttcta tctttatggt cagaaagggc gtaaaagcaa aaaacaggtc gatcccgcca
     5521 tttacccgct cattggcgca caagggcagg ggcgactctc cgcaccgcag gttgctgaac
     5581 ggtgtgtgat gttgatgctg aatgaagcag tacgttgtgt tgatgagcag gttatccgta
     5641 gcgtgcgtga cggggatatt ggtgcggtat ttggcattgg ttttccgcca tttctcggtg
     5701 gaccgttccg ctatatcgat tctctcggcg cgggcgaagt ggttgcaata atgcaacgac
     5761 tggccacgca gtatggttcc cgttttaccc cttgcgagcg tttggtcgag atgggcgcgc
     5821 gtggggaaag tttttggaaa acaactgcaa ctgacctgca ataagaaggt caaagctata
     5881 tgaatccgcg ctgaatggcg gagtgttggt caaaatgtaa acgcatattg actatactta
     5941 cgccattgag gtaaaaaaca gcgtttcatt cggtgaatgg ataaggcaca atgccggcca
     6001 ccgttttctt tctctggttt cagatgaaag aaaatgggcg aatctggtta acaaaagcgg
     6061 tgcaatatgc aagtttttat catgcgtcac ggcgacgcag ccctcgatgc cgccagtgat
     6121 tcggttcgtc ctctgaccac taatggttgt gacgaatctc gcctgatggc gaactggctg
     6181 aaaggtcaaa aagtggaaat cgaacgcgtt ctggtgagcc cgttcctgcg agccgagcaa
     6241 acactggaag aagtagggga ttgtctgaac ctgccttcca gtgcagaagt tctgccggag
     6301 ttaacgccct gcggcgatgt tggtctggtc agtgcctatt tgcaggcgtt gaccaatgaa
     6361 ggtgttgctt cggtactggt gatctctcac ttaccgttag tcgggtatct ggttgccgag
     6421 ttatgtccgg gcgaaacgcc gcctatgttt accacctcgg ccattgccag cgtaacgctt
     6481 gatgaaagcg gaaacggtac attcaactgg cagatgagcc cgtgtaatct gaagatggca
     6541 aaagctatct gatgtgttcc aaattatgcc caatgaggta gattcattgg gcataattgc
     6601 tcatcaggca gcggatatct gtcaacctca ctactatcga agactctcct tatctataaa
     6661 taaaacactt tctacattca ttcggaaatt attcttctgc acgtatcttg attttgccca
     6721 aagttacatg ttgaaatgaa taatgtctgt ttgacactca ttgtcattta ttaatacaga
     6781 taatagagtt gaataatcag gcaggatgta attgaaactt gattaaattc tggctatagt
     6841 gtttatatat tatattgtca aaagtggata aatgccaatc gcattatata ttcattgttt
     6901 gttttttaag ctgttgatat tcattattga tatactttct attttttcta aatacttatt
     6961 ccgtattttt taaggatgtc cttaagataa tctttcttct gtcaatatat taattaaatc
     7021 tacatttact ctttagtaaa attaaattgc atcaggggtg tggaaacatc actatgcggc
     7081 cccacaccaa cgaatacaat tttctacgac ctgttctttt tggatcgcat gccgtattca
     7141 atggctgggt ataaacattg gctattgact gaatcaatgt attgcaatgt ttatattttt
     7201 aattatttat agtttaagga caaataatga gtaagtttgt taaaacagct attgctgcgg
     7261 caatggtgat gggcgtgttc acctctacgg caacaatcgc tgcgggtaac aacggtactg
     7321 cacgttttta cggcaccatt gaagactcag tgtgttctat cgttccggac gatcacaaac
     7381 tggaagttga tatgggtgat atcggtgccg aaaaactgaa aaataacggc accaccacgc
     7441 cgaaaagttt ccagattcgt ctgcaagatt gcgtatttga tacttaggaa acaatgacca
     7501 ctacctttac tggtaccgtt tcttctgcaa atagcggcaa ttattacacc attttcaata
     7561 ccgataccgg tgcggcattt aacaatgtta gcctggcgat cggtgactct ctgggtacct
     7621 cttacaaaag cggcatgggt attgaccaga aaatagtgaa agacacttct actaataaag
     7681 gcaaagcgaa gcagacactg aactttaaag cctggctggt cggcgcagct gatgcgccag
     7741 atctgggtaa tttcgaagca aataccacct tccagattac ttacctgtaa ggcatacccc
     7801 catagcgaca ctgctatggg ggatttaaat ggattttgac cgaacaagaa taaaaacgga
     7861 tagaaacgtg tatgcctgac cattctcttt ttcgattacg gattcttccg tggtgcattg
     7921 cgctggcaat gtcagggagt tatagcagtg tctgggctga agacgacatt cagtttgatt
     7981 cccgttttct ggaattaaaa ggcgacacaa aaattgatct gaagcgtttt tccagccagg
     8041 gatatgttga gcccggaaaa tacaatttac aggttcaact aaataaacag ccattggcgg
     8101 aagagtacga tatttactgg tatgctggtg aagatgacgc gagcaaaagc tatgcttgtc
     8161 tgacaccgga actggtagcg cagtttggtt taaaagaaga cgtggcgaaa aatctgcaat
     8221 ggagccacga tgctaaatgc ctgaaatccg gtcaactgga aggcatggaa attaaggctg
     8281 atttaagcca gtccgcatta gtcatttcac tgccacaggc ttacctcgaa tatacttatc
     8341 ccgactggga tccgccttca cgttgggatg acggcatctc cgggatcgtc gcggactaca
     8401 gcatcaacgc acaaacccgg cacgaagaaa atggcggtga tgatagtaac gagatcagcg
     8461 gcaacgggac ggtcggggtt aacctggggc cgtggcgtat gcgtgctgac tggcagacta
     8521 actatcaaca tactcgcagt aatgatgacg atgaattcag cggcgatgaa actcaaaaaa
     8581 aatgggagtg gagtcgctac tatgcctggc gggcgttacc atcattaaaa gccaaactgg
     8641 cgctgggcga ggattacctc agatccgata tttttgatgg ttttaactat gttggtggta
     8701 gtgtcagtac tgacgatcaa atgttgcctc ccaatctgcg cggctacgcg ccagacattt
     8761 ccggcgtggc acacaccaca gcaaaagtga ccgtcagcca gatggggcgt gtgatttacg
     8821 aaacgcaggt tccggctgga ccgtttcgta ttcaggatct tggtgattct gtctccggta
     8881 cgttgcatat tcgcattgaa gaacagaacg gccaggtgca ggaatatgac atcagcaccg
     8941 cctcgatgcc atacctcact cgtccaggtc agattcgcta taagatcatg atgggccgtc
     9001 cgcaagagtg gggacaccat gtcgagggtg aatttttttc tggtgctgaa gcttcctggg
     9061 ggatcgctaa cggctggtcg ttatatggcg gcgcactggg agatgaaaac tatcagtctg
     9121 cggcgcttgg cgtcggtcgc gatttgtcta cattcggcgc ggtcgcgttt gatgttactc
     9181 actcgcacac caaactggat aaagacaccg cttatggcaa aggttcgctg gacggtaact
     9241 ccttccgtgt gagttattcc aaagactttg accagctcaa cagccgcgtt acttttgctg
     9301 gatatcgctt ctcggaagag aactttatga ccatgagcga gtatctggat gccagtgaca
     9361 gcggaatggt acgcacgggc aacgacaaag agatgtacac cgccacttat aaccagaact
     9421 tccgcgatgc gggtgtttcg gtttatctca actatacccg ccatacctac tgggatcgcg
     9481 aggagcagat aaactacaac atcatgctct cgcactattt caatatgggc agtattcgta
     9541 atgtcagcat ctcgatgact ggctaccgtt acgagtatga caaccaggcc gacaaaggca
     9601 tgtacatttc gctcagtatg ccgtggggcg acaacagtac cgttagctat aacggtaact
     9661 atggcagtgg gacggacagc agtcaggtcg gttatttcag ccgtgtcgat gacgcgactc
     9721 actatcagtt gaacgtcggc accagtgaca aacacaccag cgttgacggc tattacagcc
     9781 atgatggttc gctggcgcag gttgacctca gtgcgaacta ccatgaaggg caatacacct
     9841 ctgcgggctt gtcgttacag ggcggcgcaa cgcttactgc ccacggtggc gcacttcacc
     9901 gtacccagaa tatgggcggg acacgcttgt tgattgatgc cgatggcgtt gccgatgttc
     9961 cggtggaagg taacggggct gctgtttata ccaatatgtt tggtaaagcc gtcgtttctg
    10021 atgtcaataa ctattaccgc aatcaggcgt atatcgacct caacagattg cctgaaaacg
    10081 ctgaagcaac ccagtcggtg gtgcaagcca cgctaactga aggtgccatt ggctaccgta
    10141 aatttgctgt cattagcgga caaaaagcga tggcggtgct gcgcctgagc gacggcagcc
    10201 atcctccgtt tggcgcagaa gtaaaaaatg ataacgagca gacagtgggc cttgtcgatg
    10261 atgacggcaa tgtttatctg gctggggtga aacctggcga acacatgagt gtgttctgga
    10321 gtggtgttgc gcattgcgat atcaacctgc cggacccgct gcctgccgat ctgtttaacg
    10381 gcttgttact gccatgccag cataaaggca atgtagcacc tatcacttcg ccggcggtca
    10441 aaccggcgat tcaggaacag acacagcggg tgacgccaac ggaacctccg acttcaattt
    10501 cagtaaacca gtaacgtgat taaggaatga tccatgttta atctgactaa cactgcaaaa
    10561 atcgttgtcc cggcactggc gctgctggcg acagcggtca gtttctccag ccacgcttcg
    10621 gtgacgcccg acaggacacg gctggtgttt aacgaaagcg acaagtccat cagcgtcacg
    10681 ctgcgcaaca acgatcccac actgccttat ctggcgcaga gctggataga ggatgcaaag
    10741 ggcaacaaaa tcagctctcc gcttgcggtg cttccgccag tgcagcgcat cgatgcgatg
    10801 atgaacggcc aggtgaaggt gcaggggctg ccggatatca acaaactgcc ggccgaccgc
    10861 gagagcgtgt tctatttcaa cgtgcgcgaa attccgccga aatcaaataa accgaacaca
    10921 ctgcagattg cgctgcagac gcgtatcaaa ctgttctggc gaccgaaggc gctggagaac
    10981 accagcatga aaagtccgtg gcagcataag gtgacgctca tccgtaacgg ccaggacttc
    11041 accgtcaata acccgacgcc gtactacgtg atcatcagca acgccagcgc taaaaaaggc
    11101 ggcaacccgc cggcgggatt cacaccgctg atgatggagc cgaaaacctc cgcaccgctg
    11161 aatgcgaaga tggacagcgt gccggtgctg acttacatca acgactacgg cgcgcggatg
    11221 ccgctgtact tcaaatgcac cggcaacagc tgccaggtgg atgaagagca gagccgcaaa
    11281 ggctgatgcc gggagggact tatgagtcac aagtttgtag cgggcgcagg gttgctggtg
    11341 ctggccggat ggggcatcag cggtttggct gttgctggca gtgatatcaa acaggtggat
    11401 ctgacgctgc gaatcctagt cgatggaccg ccgccttgct ccgtgaaggg aagcgctgtg
    11461 aaatttggca atgtgataat caacaggatc gatggtacca attaccaaca ggatgcgaaa
    11521 tacaccctca actgcggtaa taaagtcagc gatgacttac ggatgcagct caaaggcaat
    11581 accgccgtga tcaacggaga aacggttctc agcacggata tcgccggcct gggggtgcgg
    11641 atagaaaacg ccgccgacaa ctccctgttt gcagttggtg aaaataactg gacgcctttt
    11701 aatgtcaaca ctcagcctca gctgaaagcg gtgccggtaa aacagagcgg ggtgcaactg
    11761 actccgtcgg agtttaacgc cacgatgacc atggtggtgg attaccaatg aaaaaattcc
    11821 tgctcctttt actgtgcgct ggttgcgggg ctgtgctggc ggcggaagat gacatcacat
    11881 tccacggtac gctgatgtcg ccgcccgcct gtagcatcag cggcgggcaa accatcgaag
    11941 tgcaatttcg cgatctcatt atcgacagca ttgatggcaa ttatggtcgt cagaaagtgg
    12001 actacgaact gagctgcgac tcggatgtcc gcgatcccga gtggaatatg acactctcct
    12061 ggacggggac tgccacctcc tacaacgact ctgctattga gacggatgta ccgggcttcg
    12121 gaattgagct tcagcatgac ggtcagcgtt ttaagctcaa cgagccgctt tccattaacg
    12181 ccaccgattt tagccagaag ccaaagctgg aggcggtacc ggtcaaagcg gctgatgcgg
    12241 tgctgacgga cacgaccttt tctgcttacg caaccttacg ggtggattac caatgaaaac
    12301 agcacacatt tattcacccg gttatgcgct gttagcaggc ctgctgctga ccgccagcac
    12361 aggagcacag gcagtcgaca acaacctgca tttttacggc aacctgctga gtaaatcctg
    12421 cacgctggtg gtggatggtg ccaacctggc agaaatccat tttcccaccg tcagcaaccg
    12481 ggatttgatg gtatctgggc agtccgcgca tctgccggtt gtgtttaagc tgaaagactg
    12541 caaagggccg gcgggataca acgtcaaagt cacgctgagc ggcaccgaag acagcggtca
    12601 gccgggtttt ctggcagtcg atgacacctc caccgcgcag ggcgtgggga tagggatgga
    12661 aacgctcgac ggcaagcggg tggatattaa caacaccacc ggggcgacct ttgcgcttac
    12721 caacggcaac aatgatatta atttccgggc ctggatctag gcgaaaagcg gtcgtgatgt
    12781 aaccatcggt gatttcaccg ccagcctgac agcaactttt gagtatattt aaaatgaaaa
    12841 tccttcgtca tgttttatgt cttttattgc tgttaatgtt caatacatgc ggccaggcgg
    12901 cgacgaaagt tggtgagtta tatgtgccag ctggtgccag ttcacctgcg ac
//
LOCUS       DADKRT010000121        12926 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.122, whole genome shotgun sequence.
ACCESSION   DADKRT010000121 DADKRT010000000
VERSION     DADKRT010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12926
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.122"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..880)
                     /gene="rarD"
                     /locus_tag="JQ356_002899"
     CDS             complement(<1..880)
                     /gene="rarD"
                     /locus_tag="JQ356_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HAY4622925.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMLLNLLLIA
                     AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI
                     WVALAIFVMDAIYTQRR"
     gene            complement(932..1411)
                     /locus_tag="JQ356_002900"
     CDS             complement(932..1411)
                     /locus_tag="JQ356_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001350877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HAY4622926.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAF
                     KNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATATATYMVG"
     gene            1576..2445
                     /gene="pldA"
                     /locus_tag="JQ356_002901"
     CDS             1576..2445
                     /gene="pldA"
                     /locus_tag="JQ356_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HAY4622927.1"
                     /translation="MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQ
                     EHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLK
                     IGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDLF"
     gene            2578..4407
                     /gene="recQ"
                     /locus_tag="JQ356_002902"
     CDS             2578..4407
                     /gene="recQ"
                     /locus_tag="JQ356_002902"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HAY4622928.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCL
                     VVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTRE
                     QQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDY
                     GHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSL
                     QLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEM
                     AEQMPITASEMLSVNGVGMCKLERFGKPFMALIRAHVDGDDEE"
     gene            4471..5091
                     /gene="rhtC"
                     /locus_tag="JQ356_002903"
     CDS             4471..5091
                     /gene="rhtC"
                     /locus_tag="JQ356_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine export protein RhtC"
                     /protein_id="HAY4622929.1"
                     /translation="MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAP
                     APQIELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVET
                     LAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(5153..5773)
                     /gene="rhtB"
                     /locus_tag="JQ356_002904"
     CDS             complement(5153..5773)
                     /gene="rhtB"
                     /locus_tag="JQ356_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HAY4622930.1"
                     /translation="MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIA
                     GLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSL
                     ASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDII
                     VMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA"
     gene            5884..6906
                     /gene="pldB"
                     /locus_tag="JQ356_002905"
     CDS             5884..6906
                     /gene="pldB"
                     /locus_tag="JQ356_002905"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HAY4622931.1"
                     /translation="MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVR
                     FVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
                     HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIA
                     LTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRY
                     RRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNR
                     MHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSG
                     NRSTEV"
     gene            6914..7714
                     /gene="yigL"
                     /locus_tag="JQ356_002906"
     CDS             6914..7714
                     /gene="yigL"
                     /locus_tag="JQ356_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HAY4622932.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDII
                     TNVYRDDEWFMNRHRPEEMRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMND
                     AEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS"
     gene            7790..8689
                     /gene="bioP"
                     /locus_tag="JQ356_002907"
     CDS             7790..8689
                     /gene="bioP"
                     /locus_tag="JQ356_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter"
                     /protein_id="HAY4622933.1"
                     /translation="MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFL
                     PFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIY
                     DIMNKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTLITGALVILASLWVH
                     RKWVAPRSSQTADDRRRDCALSE"
     gene            complement(8577..9530)
                     /gene="metR"
                     /locus_tag="JQ356_002908"
     CDS             complement(8577..9530)
                     /gene="metR"
                     /locus_tag="JQ356_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HAY4622934.1"
                     /translation="MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     YEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQP
                     VTEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL"
     gene            9766..12027
                     /gene="metE"
                     /locus_tag="JQ356_002909"
     CDS             9766..12027
                     /gene="metE"
                     /locus_tag="JQ356_002909"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HAY4622935.1"
                     /translation="MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELR
                     ARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPV
                     LLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELP
                     QAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDGVAEL
                     HKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSV
                     ETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAV
                     EKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKG
                     NLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEA
                     FRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAAL
                     ANMVQAAQNLRRG"
     gene            complement(12312..12557)
                     /locus_tag="JQ356_002910"
     CDS             complement(12312..12557)
                     /locus_tag="JQ356_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HAY4622936.1"
                     /translation="MITETEINVLKVMAEKDINWNWMNLDRTLSIRQIPGFGNVVNIV
                     NKLANEGLVIIEDSGHKSMPHYHVTEKGYNFVKSENK"
     gene            complement(12547..>12926)
                     /locus_tag="JQ356_002911"
     CDS             complement(12547..>12926)
                     /locus_tag="JQ356_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4622937.1"
                     /translation="FNPDLAGGPIENLTTDGVTINREGIAIVEKHIARFGHDPVNEVM
                     INRLKDIEKGKIPPEQVDLNFYTHECREYQRYCNLGWETGQPDGDAGYALWNHTHTAT
                     LEDYKLKGELNDLYHQDALDYDN"
BASE COUNT         3052 a         3263 c         3450 g         3161 t
ORIGIN      
        1 ttctacgctg cgtataaatc gcatccatca caaaaattgc cagcgccacc caaataaagg
       61 cgaaggtcac catcttatcg gcacccggtt tttcaccata aaacgtcact gccaacagga
      121 acatcagcgt cgggccaata tactggaaga agcctaacgt ggagagacgc aggcgtgtag
      181 cagctgcggt aaaacacaac agcggtacgg tggtgacaat accggcggcg atcagcagca
      241 aattcagcaa catcgggttt tgccccatat ggctggttga gctgtcggca atagcaaaca
      301 gataaatcgc cgccacgggc agcagccaca tggtttcgat taacatgccg gtttgcgctt
      361 caacggcaat tttcttgcgt accagtccgt agaaggcaaa actaaacgcc agccccagcg
      421 cgatgattgg cagcgaacca aaagtccaca actgaaccaa cacgccacat atcgccagaa
      481 tcaccgccag ccattgcatc cggcggaatc gctcgccgag gaaaatcatc cccagcacaa
      541 tgttcaccag cgggttaata aagtaaccaa ggctcgcttc cagcatatgg tgattgttca
      601 ccgcccagat aaacagtagc cagttgccac caatcagcac ggcagagact gccagcataa
      661 aaattttctg tggcgtctga atcagcgttt ttaaatagga ccactggcgg caaatgctca
      721 tcagcaccac cataaagaaa aacgaccaga tcacgcgatg cgtcaggatc tcatcggcgg
      781 gcacgtagta aatcagcttg aagtatgctg gcgcaatacc ccaaataaaa taagcggcaa
      841 gagcgagtaa tacgccctgc cgcgtttgtt ttgcatccat cgggaatact catttttaat
      901 tggtaacagc agtttacctg cttttatgtc ttcaacctac catataggtg gcggtggcgg
      961 tggcggtggc actggcaata taaagctgtt cttcattgtg taattcaacg cgggcgacgg
     1021 cgactttatt gcctgcacgc aacaggctac tggtagcagt aaaacgctcg cccctgcctg
     1081 ggcgcagata atcaacgcga agatcaatgg tccccatccg cgatagccgc tggcgtagtt
     1141 catcttcact gatggtttcg tggcgggtta aggtacttcc cacgcacacc agaccggcgg
     1201 cgacatccag cgccgacgca atgactccgc cgtgcaaaat gctttgcgcc cagttaccca
     1261 ccatcatcgg ctgattttta aaggccagct gtgcgaactc tttttcgtaa cgctccagct
     1321 ccatccctaa cgcgcggtta aatggcatgt gataaacaaa catctcaccc actaatttca
     1381 gggcttgttc agcggtcagt acggcagaca tatcatcctt acacttcatt ggttaatgaa
     1441 atgttgattt tatgcttctt tgttgttggt ttctacttta ggaagggata actaacggca
     1501 atggagttaa gtatgtaaaa tagcccgcag aaaaacattc accttatcaa taattcgtta
     1561 cggagaacac gaccgatgcg gactctgcag ggctggttgt tgccggtgtt tatgttgcct
     1621 atggcagtat atgcacaaga ggcaacggtg aaagaggtgc atgacgcgcc agcggtgcgt
     1681 ggcagtatta tcgccaatat gctgcaggag catgacaatc cgttcacgct ctatccttat
     1741 gacaccaact acctcatcta cacccaaacc agcgatctga acaaagaagc gattgccagt
     1801 tacgactggg cggaaaatgc gcgtaaggat gaagtaaagt ttcagttgag cctggcattt
     1861 ccactgtggc gtgggatttt aggcccgaac tcggtgttgg gtgcgtctta tacgcaaaaa
     1921 tcctggtggc aactgtccaa tagcgaagag tcttcaccgt ttcgtgaaac caactacgaa
     1981 ccgcaattgt tcctcggttt tgccaccgat taccgttttg caggttggac gctgcgcgat
     2041 gtggagatgg ggtataacca cgactctaac gggcgttccg acccgacctc ccgcagctgg
     2101 aaccgccttt atactcgcct gatggcagaa aacggtaact ggctggtaga agtgaagccg
     2161 tggtatgtgg tgggtaatac tgacgataac ccggatatca ccaaatatat gggttactac
     2221 cagcttaaaa tcggctatca cctcggtgat gcggtgttga gtgcgaaagg acagtacaac
     2281 tggaataccg gttacggcgg cgcggagtta ggcttaagtt acccgatcac caaacatgtg
     2341 cgcctttata ctcaggttta cagcggctat ggcgaatcgc tcatcgacta taacttcaac
     2401 cagacccgtg tcggtgtagg agttatgcta aacgacttgt tttgatgaac ggttgagtgg
     2461 ttggcaaatc tggaacccag catccaggat taccctctca gagactaaaa gcattgcagt
     2521 ttctcgcgca ggcgctgaaa atagcgcctg tttttatttc aggcaatcgg ggtgaatgtg
     2581 gcgcaggcgg aagtgttgaa tctggagtcc ggagctaaac aggttttaca agaaaccttt
     2641 ggctaccaac agtttcgccc cggccaggaa gaaattatcg acactgtgct ttccggtcgc
     2701 gattgcctgg tcgtcatgcc caccggtggc ggaaaatccc tttgctatca aattcctgcc
     2761 ttattgctaa acggccttac cgtggttgtt tcaccgctga tttcgttgat gaaagatcag
     2821 gtggatcaac tgcaagccaa cggcgtggcg gcggcgtgcc ttaactcgac gcaaacccgc
     2881 gagcagcaac ttgaagtgat gacaggctgc cgcaccgggc aaattcgtct gctttatatc
     2941 gccccggaac gcctgatgct ggataacttt cttgagcatc tggcgcactg gaatccggtg
     3001 ttattagccg ttgatgaagc gcactgtatc tcccaatggg gccacgattt ccgcccggaa
     3061 tatgccgcgc ttggtcagtt acgccagcgt ttcccgaccc tgccgtttat ggcgctgact
     3121 gccacagccg acgacaccac gcgccaggat atcgtgcgct tgctggggct gaacgatccg
     3181 ctgattcaaa tcagcagttt tgaccgtccg aatattcgct acatgctgat ggagaagttc
     3241 aaaccgctcg atcagttgat gcgctacgtg caggaacagc gcggtaagtc aggcattatc
     3301 tactgcaaca gccgcgcgaa agtagaagac accgctgcgc gcctgcaaag caagggaatt
     3361 agcgcggcgg cctatcatgc tgggctggaa aataatgttc gcgccgacgt gcaggaaaaa
     3421 tttcagcgcg atgacctgca aattgtggtg gcgacggtgg cgttcggcat gggcatcaat
     3481 aaaccaaacg ttcgcttcgt ggtccacttt gatattccgc gcaatatcga atcctattat
     3541 caggaaaccg gtcgcgccgg gcgtgatggc ctgcccgcgg aagcgatgct gttttacgat
     3601 ccggccgata tggcgtggct gcgccgttgc ctggaagaga agccgcaggg gcagttacag
     3661 gatatcgaac gtcataaact caatgcgatg ggcgcttttg ccgaagcgca aacttgccgt
     3721 cgtctggtat tgctgaacta ttttggcgaa gggcggcaag agccgtgcgg gaactgcgat
     3781 atctgcctcg atccgccgaa acagtacgac ggttcaaccg atgctcagat tgccctttcc
     3841 accattggtc gtgtgaatca gcggtttggg atgggttatg tggtggaagt gattcgtggt
     3901 gctaataacc agcgtatccg cgactatggt catgacaaac tgaaagtcta tggcatgggc
     3961 cgtgataaaa gccatgaaca ttgggtgagc gtgatccgcc agctgattca cctcggcctg
     4021 gtgacgcaaa atattgccca gcattctgcc ctacaactga cagaggccgc gcgcccggtg
     4081 ctgcgcggcg aatcctcttt gcaacttgcc gtgccgcgta tcgtggcgct caaaccgaaa
     4141 gcgatgcaga aatcgttcgg cggcaactat gatcgcaaac tgttcgccaa attacgcaaa
     4201 ctgcgtaaat cgattgccga tgaaagtaat gtcccgccgt acgtggtgtt taacgacgca
     4261 accttgattg agatggctga acagatgccg atcaccgcca gcgaaatgct cagcgttaac
     4321 ggcgttggga tgtgcaagct ggaacgcttt ggtaaaccgt ttatggcgct gattcgtgcg
     4381 catgtcgatg gcgacgacga agagtagtca gcagcataaa aaagtgccag gatgaagact
     4441 ccgtaaacgt ttcccccgcg agtcaaatgt atgttgatgt tatttctcac cgtcgccatg
     4501 gtgcacattg tggcgcttat gagccccggt cccgatttct tttttgtctc tcagaccgct
     4561 gtcagtcgtt cccgtaaaga agcgatgatg ggcgtgctgg gtattacctg cggcgttatg
     4621 gtttgggcag ggattgcgtt gcttggcctg catttgatta tcgaaaaaat ggcctggctg
     4681 catacgctga ttatggttgg cggtggcctg tatctctgct ggatgggtta ccagatgcta
     4741 cgcggtgcac tgaaaaaaga ggctgtatct gcgcctgcac cacagattga gctggcgaaa
     4801 agcgggcgca gtttcctgaa aggtttactg accaatctcg ctaatccgaa agcgattatc
     4861 tactttggct cggtgttctc attgtttgtc ggtgataacg ttggcactac cgcgcgctgg
     4921 ggcatttttg cgctgatcat tgtcgaaaca ctggcgtggt ttaccgtcgt tgccagcctg
     4981 tttgccctgc cgcaaatgcg ccgtggttat caacgtctgg cgaagtggat tgatggtttt
     5041 gccggggcgt tatttgccgg atttggcatt catttgatta tttcgcggtg atgccagacg
     5101 cgtcttcaga gtaagtcgga taaggcgttt acgccgcatc cgacattatt tttcacgcat
     5161 gcctcgccga tgctaacagc gctcccacca gcataaacaa cgagccgaaa atcttattca
     5221 gcgccttcat ctgctttggt cctttaatcc atagagcaat ccgttgagca agggtggcgt
     5281 aaccgatcat cacaataata tcgactacaa tagtggtgac gccgagcacg atatactgca
     5341 tcagttgcgg ctgctgtggc atgatgaatt gcggaaatag cgccgccaga aacacaatac
     5401 ttttgggatt ggtgagattc acaaaaactg cgcgctggaa caaatgtcga cgcgattgag
     5461 tagaggcaag cgatttaagg tcaattgcac cagcggcgcg ccactgctgg attcccagcc
     5521 aaatcaagta agccgcgcct gcccacttca acacttcaaa cgcaatcact gagcgggaaa
     5581 atagcgtccc caaacccacg ccaaccagca caatatgaat cgccagtccg gtctgaagcc
     5641 cagcaataga cgccaccgcg ccgcgataac cgtggttgag cgaggtggtc atagtgttga
     5701 ttgcaccaga gcctggcgac aggcttaaaa tgatcgatgt cagcaggtag gcaaaccacc
     5761 attctaaggt catgatgaac tcccggtgtg tctatttttg tgccacaata cgctactgtc
     5821 gcagcgttgt gtcaggcacg ctaaaaaaaa cgattttacg tggtttaaga ggcagattac
     5881 ccgatgtttc agcagcaaaa agactgggaa acaagagaaa acgcgtttgc tgcttttacc
     5941 atgggaccgc tgactgattt ctggcgtcag cgtgatgaag cagagtttac tggtgtggat
     6001 gacattccgg tgcgctttgt ccgttttcgc gcacagcacc atgaccgggt ggtagtcatc
     6061 tgcccggggc gtattgagag ctacgtaaaa tatgcggaac tggcctatga cctgttccat
     6121 ttggggtttg atgtcttaat catcgaccat cgcgggcagg gacgttccgg tcgcctgtta
     6181 gccgatccgc atctcgggca tgttaatcgc tttaatgatt atgttgatga tctggcggca
     6241 ttctggcagc aggaggtcca gcccggtccg tggcgtaaac gctatatact ggcacattcg
     6301 atgggcggtg cgatctccac attatttctg caacgccatc caggtgtatg tgacgccatt
     6361 gcgctaactg cgccaatgtt tgggatcgtg attcgtatgc cgtcatttat ggcacggcag
     6421 atcctcaact gggccgaagc gcatccacgt ttccgtgatg gctatgcaat aggcaccggg
     6481 cgctggcgcg cgttgccgtt tgctatcaac gtactgaccc acagcagaca gcgatatcga
     6541 cgtaacttac gcttctatgc tgatgaccca acgattcgcg tcggtgggcc gacctaccat
     6601 tgggtacgcg aaagtattct ggctggcgaa caggtgttag ccggtgcggg tgatgacgcc
     6661 acgccaacgc ttctcttgca ggctgaagag gaacgcgtgg tggataaccg catgcatgac
     6721 cgtttttgtg aactccgcac cgccgcgggc catcctgtcg aaggaggacg gccgttggta
     6781 attaaaggtg cttaccatga gatccttttt gaaaaggacg caatgcgctc agtcgcgctc
     6841 cacgccatcg ttgatttttt caacaggcat aactcaccca gcggaaaccg ctctacagag
     6901 gtttaaattt cttatgtacc aggttgttgc gtctgattta gatggcacgt tactttctcc
     6961 cgaccatacg ttatcccctt acgccaaaga aactctgaag ctgctcaccg cgcgcggcat
     7021 caactttgtg tttgcgaccg gtcgtcacca cgttgatgtg gggcaaattc gcgataatct
     7081 ggagattaag tcttacatga ttacctccaa tggtgcgcgc gttcacgatc tggatggtaa
     7141 tctgattttt gctcataacc tggatcgcga cattgccagc gatctgtttg gcgtagtcaa
     7201 cgacaatccg gacatcatta ctaacgttta tcgcgacgac gaatggttta tgaatcgcca
     7261 tcgcccggaa gagatgcgct tttttaaaga agcggtgttc aaatatgcgc tgtatgagcc
     7321 tggattactg gagccggaag gcgtcagcaa agtgttcttc acctgcgatt cccatgaaca
     7381 actgctgccg ctggagcagg cgattaacgc tcgttggggc gatcgcgtca acgtcagttt
     7441 ctctacctta acctgtctgg aagtgatggc gggcggcgtt tcaaaaggcc atgcgctgga
     7501 agcggtggcg aagaaactgg gctacagcct gaaggattgt attgcgtttg gtgacgggat
     7561 gaacgacgcc gaaatgctgt cgatggcggg gaaaggctgc attatgggca gtgcgcacca
     7621 gcgtctgaaa gaccttcatc ccgagctgga agtgattggt actaatgccg acgacgcggt
     7681 gccgcattat ctgcgtaaac tctatttatc gtaatcgttc tttatttggt cagttgtcaa
     7741 cctgatactt cgctacaatg gatactcgtt aatcaaagag ttttccattg tggcgctact
     7801 tatcatcacc acgattctgt gggccttctc ctttagcttt tatggcgagt accttgcggg
     7861 gcacgtcgat agctattttg cggtgctggt gcgcgttggc ctggcggcac tcgtttttct
     7921 gccgtttctg cgtacccgtg gcaatagcct gaaaacagtc ggcctgtata tgctggtggg
     7981 cgcgatgcag ctcggcgtga tgtatatgct gagtttccgc gcttatctct atctgacggt
     8041 ttccgaactg ctgctgttca ccgtactgac gccgctctac atcacgctga tttatgacat
     8101 catgaataag cgccgtctgc gctggggata tgcttttagt gccttgttgg cggtgattgg
     8161 tgccgggatt attcgctatg atcaggtcac cgaccatttc tggactggct tgttgctggt
     8221 gcaactctcc aatatcactt ttgccatcgg catggtgggt tacaaacgcc tgatggaaac
     8281 tcgcccgatg ccgcagcata acgcctttgc gtggttctat cttggcgcgt tcctggtggc
     8341 ggtaattgca tggttcttgc tgggaaatgc gcagaaaatg ccgcaaacca cgttgcaatg
     8401 gggcattctg gtgtttcttg gcgtggtggc ttccgggatt ggctacttta tgtggaacta
     8461 cggcgcgacg caggtggacg ccggaacgct gggaattatg aataatatgc acgttccggc
     8521 agggctgctg gtaaacctgg ctatctggca ccaacagccg cactggccaa cgttgattac
     8581 aggcgcgctg gtgatcctgg cctcactgtg ggtgcatcgt aagtgggtcg ctccgcgctc
     8641 ttcacaaacg gcagatgatc gcaggcgtga ttgcgcgctg agcgaataaa cgcttccgta
     8701 actggctgac gctgctcgcc atcgcgcacg gcggcgtaca gtcggctcca caagccttcg
     8761 cccagggttt tggtcaccac cagaccctgg cgctcaaaac tctctactac ccaatgcggt
     8821 agcgcggcaa tacccatccg cgcggcaacc atctgaatca acaataaggt gttatcgacg
     8881 cttttcagtg acggactgac gcctgccggc tgaagaaaat gccgccagac atccagtcga
     8941 ctacgctgca ccggataaat taatagcgtc tcgctggcga gatcttccgg tgtaatacgc
     9001 gtttttgccg ccagtggatg gtcaggtgct aacaccagac gcacttcata gtcgaacatc
     9061 ggcgaataat gcagaccact gcgcggcaga atatcggacg tcattaccag atccagctct
     9121 ccctgttgca aggcgggctg cgggtcaaat gtcacgcccg atttaaagtc catctcgacc
     9181 tgcggccagt tcttatggaa attttctaac gcgggcgtca gccactgtat acagctatgg
     9241 cactcaatgg caatgcgcag acgcgtctgc tgcggttcat tgcaggcttg cagtgcctgg
     9301 ctaatttgtg gcagcacctg gtttgccagt tgcaacagga tttctccctg cggtgtaaag
     9361 cgaagcggct ggcttttacg cacaaatagc cggaagccaa ggcgttgttc cagatcgcta
     9421 aactggtgag acagggcgga ttgcgtttga tgcaacgtcg ccgcagcggc tgcgagtgag
     9481 ccgcagttcc gcaacgcttg tagcgttttc agatgtttta cttcgatcat gaaagtcctt
     9541 cacttcggca tgaataattt gcgcttgagg aatatacagt aaccgccaat tatggatgtg
     9601 taaacatctg gacggctaaa atccttcgtc ttttaaattt atggtgcgtt ggctgcgttt
     9661 ctccaccccg gtcacttact tcagtaagct cccggggatg aataaacttg ccgccttccc
     9721 taaattcaaa atccatagga tttacatata attagaggaa gaaaaatgac aatattgaat
     9781 cacaccctcg gtttccctcg cgttggcctg cgtcgcgagc tgaaaaaagc gcaagagagt
     9841 tattgggcag ggaactccac gcgtgaagaa ctgctggcgg tagggcgtga attgcgtgct
     9901 cgtcactggg atcaacaaaa gcaagcgggt atcgacctgc tgccggtggg cgattttgcc
     9961 tggtacgatc atgtactgac caccagtctg ctgctgggta acgttccggc gcgtcatcag
    10021 aacaaagatg gttcggtaga tattgacacc ctgttccgta ttggtcgtgg acgtgcgccg
    10081 actggcgaac ctgcggcggc agcggaaatg accaaatggt ttaacaccaa ctatcactac
    10141 atggtgccgg aattcgttaa aggccaacag ttcaaactga cctggacgca gctgctggag
    10201 gaagtggacg aggcgctggc gctgggccac aacgttaagc ctgtgctgct ggggccggtt
    10261 acctggctgt ggctggggaa agtgaaaggt gaacagtttg accgcctgag cctgctgaac
    10321 gacattctgc cggtttatca gcaagtgctg gcagaactgg agaaacgcgg catcgagtgg
    10381 gtacagattg atgaacccgc gctggtactg gaactaccac aggcgtggct ggacgcatac
    10441 aaacccgctt acgacgcgct ccagggacag gtgaaactgc tgctgactac ctattttgaa
    10501 ggcgttacgc caaatctcga cacgattact gcgctgcctg ttcagggact gcatgtggac
    10561 cttgtacatg gtaaagatgg cgttgctgaa ctgcacaagc gcctgccttc tgactggctg
    10621 ctgtctgcgg gactgatcaa tggtcgtaac gtctggcgcg ccgatcttac tgagaaatat
    10681 gcgcaaatta aggacattgt cggcaaacgt gatttgtggg tggcatcttc ctgctcgttg
    10741 ctgcacagcc ccatcgacct gagcgtggaa acgcgtcttg atgcagaagt gaaaagctgg
    10801 tttgccttcg ccttacaaaa atgccatgaa ctggcactgc tgcgcgatgc gctgaacagt
    10861 ggtgacacgg cagctctggc agagtggagc gccccaattc aggcgcgtcg tcactctact
    10921 cgtgtacata atccggcggt agaaaagcgt ctggcggcga tcaccgccca ggacagccag
    10981 cgtgcgaatg tctatgaagt gcgtgctgaa gcccagcgtg cgcgttttaa actgccagcg
    11041 tggccgacca ccacgattgg ttccttcccg caaaccacgg aaattcgtac cctgcgtctg
    11101 gatttcaaaa agggcaatct cgacgccaac aactaccgca cgggcattgc ggaacatatc
    11161 aagcaggcca ttgttgagca ggaacgtttg ggactggatg tgctggtaca tggcgaggcc
    11221 gagcgtaatg acatggtgga atactttggc gagcacctcg acggatttgt ctttacgcaa
    11281 aacggttggg tacagagcta cggttcccgc tgcgtgaagc caccgattgt tattggtgac
    11341 gttagtcgcc cggcaccgat taccgtggag tgggcgaagt atgcgcaatc tctgactgat
    11401 aaaccggtga aagggatgct gactggcccg gtgaccattc tctgctggtc gttcccgcgt
    11461 gaagatgtca gccgtgaaac catcgccaaa caaattgcgc tggcgctgcg tgatgaagtg
    11521 gcggacctgg aagccgcagg aattggcatc atccagattg atgaaccggc gctgcgcgaa
    11581 ggtttaccgc tgcgtcgtag cgactgggat gcatatctcc agtggggcgt ggaggccttc
    11641 cgtatcaacg ccgccgtggc gaaagatgac acacaaatcc acactcacat gtgttattgc
    11701 gagttcaacg acatcatgga ttccattgcg gcactggatg cagacgtcat caccatcgaa
    11761 acctcgcgtt ccgacatgga gttgctggag tcgtttgaag agtttgatta tccgaatgaa
    11821 atcggtccag gcgtctatga cattcactcg ccaaacgtac cgagcgtaga atggattgaa
    11881 gccttgctga agaaagcggc aaaacgcatt ccggcagagc gcctgtgggt caacccggac
    11941 tgtggcctga aaacgcgcgg ctggccagaa acccgcgcgg cactggcgaa catggtgcag
    12001 gcggcgcaga atttgcgtcg gggatgatga atattaacga gtcactgtaa attgcagtac
    12061 gatgaaagag gcaaaactgc ctgataccag gcctacataa tttatgcaat ttattgaatt
    12121 tttgagtttt gttggccgga caaggcgttc acgccgcatc cggcatgaac aacgcgcact
    12181 ttgccaataa tctgatggct tccatcaccg gaagccattt tgctatctgc gcccgttcag
    12241 atacagaaat aaccgaatca tttttacgca aaatataatc ctgagcgatt tgttcagtaa
    12301 tcaacgctac gttatttatt ctcacttttc acgaaattgt atcccttttc agtaacgtgg
    12361 tagtgaggca tagacttatg tccgctatcc tcaataataa ccaaaccctc gttagctaat
    12421 ttgttaacaa tgttaacaac attaccgaat cctggaattt gccttatgga tagtgtgcga
    12481 tcgagattca tccagttcca gtttatatct ttctcagcca taactttcag tacgttaatt
    12541 tcagtttcag ttatcatagt caagtgcatc ctggtggtat aagtcattaa gttctccctt
    12601 aagtttataa tcttctagag tagcagtatg cgtatgattc cagagtgcat agcctgcgtc
    12661 accatcaggt tgtcctgttt cccaaccaag attacagtaa cgctgatatt cccgacactc
    12721 atgagtatag aagttaagat ctacttgttc tggggggatt tttcctttct caatgtcttt
    12781 cagtctattg atcatcactt catttacagg gtcatgacca aatctggcta tgtgtttttc
    12841 aacaatagcg ataccttccc tgttgattgt tacgccatct gtcgtcagat tttctattgg
    12901 accaccggca aggtcgggat taaatg
//
LOCUS       DADKRT010000122        12923 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.123, whole genome shotgun sequence.
ACCESSION   DADKRT010000122 DADKRT010000000
VERSION     DADKRT010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12923
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.123"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            355..2748
                     /gene="malP"
                     /locus_tag="JQ356_002912"
     CDS             355..2748
                     /gene="malP"
                     /locus_tag="JQ356_002912"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HAY4622938.1"
                     /translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
                     EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQEVQDSLKAYDINLTDL
                     LEEEIDPALGNGGLGRLAACFLDSMATIGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
                     DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
                     VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITPRRWIKQCNPALAALLDKLLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
                     VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLQDYCVSAAEKLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEISEKVGEENIFIFGHTVE
                     QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
                     VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            2758..4842
                     /gene="malQ"
                     /locus_tag="JQ356_002913"
     CDS             2758..4842
                     /gene="malQ"
                     /locus_tag="JQ356_002913"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HAY4622939.1"
                     /translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
                     TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
                     KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
                     IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
                     VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
                     QMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFC
                     EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
                     MSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
                     LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
                     LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
                     IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLETMFADDGVNKLLKD
                     LDRRRRAAAKKQ"
     gene            complement(4887..6203)
                     /gene="gntT"
                     /locus_tag="JQ356_002914"
     CDS             complement(4887..6203)
                     /gene="gntT"
                     /locus_tag="JQ356_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY4622940.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
                     MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
                     SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
                     VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
     gene            complement(6564..7139)
                     /gene="nfuA"
                     /locus_tag="JQ356_002915"
     CDS             complement(6564..7139)
                     /gene="nfuA"
                     /locus_tag="JQ356_002915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HAY4622941.1"
                     /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
                     EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            complement(7198..7881)
                     /gene="gntX"
                     /locus_tag="JQ356_002916"
     CDS             complement(7198..7881)
                     /gene="gntX"
                     /locus_tag="JQ356_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417872.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HAY4622942.1"
                     /translation="MLTVPGLCWLCRMPLALGHWGICSVCSRAARTDKTLCPQCGLPA
                     THSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL
                     HARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRWLHCRWDSEAVTRTRAT
                     ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            7919..8689
                     /gene="bioH"
                     /locus_tag="JQ356_002917"
     CDS             7919..8689
                     /gene="bioH"
                     /locus_tag="JQ356_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HAY4622943.1"
                     /translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
                     VDLPGFGRSQGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
                     VTVASSPCFSARDDWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
                     LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVPMPFLRLYGYLDGLVPRKVVPML
                     DKLWPRSKSYIFAKAAHAPFISHPVEFCHLLVALKQRV"
     gene            complement(8718..9596)
                     /gene="rpnA"
                     /locus_tag="JQ356_002918"
     CDS             complement(8718..9596)
                     /gene="rpnA"
                     /locus_tag="JQ356_002918"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnA"
                     /protein_id="HAY4622944.1"
                     /translation="MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKT
                     LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
                     MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
                     VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMGCLLSSGYANDRQIKGLFNYILQ
                     TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDI
                     MRFTGVSEEELAAASQ"
     gene            complement(9799..10035)
                     /gene="feoC"
                     /locus_tag="JQ356_002919"
     CDS             complement(9799..10035)
                     /gene="feoC"
                     /locus_tag="JQ356_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HAY4622945.1"
                     /translation="MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMG
                     KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            complement(10035..12356)
                     /gene="feoB"
                     /locus_tag="JQ356_002920"
     CDS             complement(10035..12356)
                     /gene="feoB"
                     /locus_tag="JQ356_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HAY4622946.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
                     FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
                     LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
                     AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
                     IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
                     GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
                     KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
                     NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSL
                     KDTFSLSVLMNPIEASKGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
                     AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
                     LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
     gene            complement(12373..12600)
                     /gene="feoA"
                     /locus_tag="JQ356_002921"
     CDS             complement(12373..12600)
                     /gene="feoA"
                     /locus_tag="JQ356_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HAY4622947.1"
                     /translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
BASE COUNT         3219 a         3236 c         3514 g         2954 t
ORIGIN      
        1 tgccatctaa aaagatgatc ttaataaatc tattaagaat gagatggagc acactggata
       61 ttttacttgt gaaactgttt cactccttta cttaatttat agagttacct tccgcttttt
      121 gaaaatacgc aacggccatt ttttgcactt agatacagat tttctgcgct gtattgcatt
      181 gatttgctgc taatcctgtg gtttgcacta gctttaagtg gttgagatca catttccttg
      241 ctcatccccg caactcctcc ctgcctaatc ccccgcagga tgaggaaggt caacatcgag
      301 cctggcaaac tagcgataac gttgtgttga aaatctaaga aaagtggaac tcctatgtca
      361 caacctattt ttaacgataa gcaatttcag gaagcgcttt cacgtcagtg gcagcgttat
      421 ggcttaaatt ctgcggctga aatgactcct cgccagtggt ggctagcagt gagtgaagca
      481 ctggccgaaa tgctgcgtgc tcagccattc gccaagccgg tggcgaatca gcgacatgtt
      541 aactacatct caatggagtt tttgattggt cgcctgacgg gcaacaacct gttgaatctc
      601 ggctggtatc aggaagtaca ggattcgttg aaggcttatg acatcaatct gacggacctg
      661 ctggaagaag agatcgaccc ggcgctgggt aacggtggtc tgggacgtct ggcggcgtgc
      721 ttcctcgact caatggcaac tatcggtcag tctgcgacgg gttacggtct gaactatcaa
      781 tatggtttgt tccgccagtc ttttgtcgat ggcaaacagg ttgaagcgcc ggatgactgg
      841 catcgtagta actacccgtg gttccgccac aacgaagcac tggatgtgca ggtagggatt
      901 ggcggtaaag tgacgaaaga cggacgctgg gagccggagt ttaccattac cggtcaagcg
      961 tgggatctcc ccgttgtcgg ctatcgtaat ggcgtggcgc agccgctgcg tctgtggcag
     1021 gcgacgcacg cgcatccgtt tgatctgact aaatttaacg acggtgattt cctgcgtgcc
     1081 gaacagcagg gcatcaatgc ggaaaaactg accaaagttc tctatccaaa cgacaaccat
     1141 actgccggta aaaagctgcg cttgatgcag cagtacttcc agtgtgcctg ttcggtagcg
     1201 gatattttgc gtcgccatca tctggcgggg cgtaaactgc acgaactggc ggattatgaa
     1261 gttattcagc tgaacgatac ccacccaact atcgcgattc cagaactgct gcgcgtgctg
     1321 atcgatgagc accagatgag ctgggatgac gcctgggcca ttaccagcaa aactttcgct
     1381 tacaccaacc ataccctgat gccagaagcg ctggaacgct gggatgtgaa actggtgaaa
     1441 ggcttactgc cgcgccatat gcagattatt aacgaaatta atactcgctt taaaacgctg
     1501 gtggagaaaa cctggccggg cgatgaaaaa gtgtgggcca aactggcggt ggtgcacgat
     1561 aaacaagtgc atatggcgaa cctgtgtgtg gttggcggtt tcgcggtgaa cggtgttgcg
     1621 gcgctgcact cggatctggt ggtgaaagat ctgttcccgg aatatcacca gctatggccg
     1681 aacaaattcc ataacgtcac caacggtatt accccacgtc gctggatcaa acagtgcaac
     1741 cctgcactgg cggctctgtt ggataaatta ctgcaaaaag agtgggctaa cgatctcgat
     1801 cagctgatca atctggaaaa attcgctgat gatgcgaaat tccgtcagca atatcgcgag
     1861 atcaagcagg cgaataaagt ccgtctggcg gagtttgtga aagttcgtac cggtattgag
     1921 atcaatccac aggcgatttt cgatattcag attaaacgtc tgcatgagta caaacgccag
     1981 cacctgaatc tgctgcatat tctggcgttg tacaaagaaa ttcgtgaaaa cccgcaggct
     2041 gatcgcgtac cgcgcgtctt cctcttcggc gcgaaagcgg caccgggcta ctacctggcg
     2101 aagaatatta tctttgcgat caacaaagtg gctgacgtga tcaacaacga tccactggtt
     2161 ggcgataagt tgaaggtggt gttcctgcag gattattgcg tttcggcggc ggaaaaactg
     2221 atcccggcgg cggatatctc cgaacaaatt tcgactgcag gtaaagaagc ttccggtacc
     2281 ggcaatatga aactggcgct caatggtgcg cttactgtcg gtacgctgga tggtgcgaac
     2341 gttgaaatct ccgagaaagt cggtgaagaa aatatcttta tttttggtca taccgtggaa
     2401 caagtgaagg caattctggc caaaggctac gacccggtga aatggcggaa gaaagataag
     2461 gtgctggacg cagtattgaa agagctggaa agcggtaaat acagcgacgg cgataagcat
     2521 gccttcgacc agatgctgca cagtatcggc aaacaaggcg gcgatccgta tctggtgatg
     2581 gcggatttcg cagcctatgt tgaggcacaa aagcaggtgg atgtgctgta ccgcgaccag
     2641 gaggcctgga ctcgcgcggc gatcctcaat accgcccgct gcggtatgtt tagctcggat
     2701 cgctctattc gcgattatca ggctcgtatc tggcaggcaa aacgctaagg aagctcgatg
     2761 gaaagcaaac gtctggataa tgccgcgctg gcggcgggga ttagccccaa ttacatcaat
     2821 gcccacggta aaccgcagtc gattagcgcc gaaaccaaac ggcgtttgct tgacgcgatg
     2881 catcaacgta ccgccacgaa agtggcggta acgccagtcc cgaatgtcat ggtttatacc
     2941 agcggcaaaa aaatgccgat ggtggtggag ggcagcggcg aatatagctg gctgctgacc
     3001 accgaagaag gaacacagta caaaggccat gtaacggggg gcaaagcgtt caatctaccg
     3061 acgaagctgc cggaaggtta tcacacgctg acactcaccc aggacgacca gcgcgcgcat
     3121 tgccgggtga ttgtcgcccc gaaacgctgt tacgaaccgc aggcgttgct gaataaacaa
     3181 aagctgtggg gtgcctgcgt tcagctttat acgctgcgat cggaaaaaaa ctggggtatt
     3241 ggggattttg gcgatctcaa agcgatgctg gtggatgtgg caaaacgtgg cgggtcgttc
     3301 atcggcctga acccgattca tgcgctctat ccggcaaatc cggagagtgc cagcccatac
     3361 agtccgtctt ctcgccgttg gctgaatgtg atttatatcg acgttaacgc cgttgaagat
     3421 ttccatctta gcgaagaggc tcaggcctgg tggcagttgc cgaccacgca acagacgctg
     3481 caacaggcgc gcgatgccga ctgggtcgat tactccacgg ttaccgccct aaaaatgaca
     3541 gcattacgaa tggcgtggaa aggtttcgcg caacgtgatg atgagcagat gaccgcgttt
     3601 cgccagtttg ttgcagagca gggcgacagc ctgttctggc aggcagcctt tgatgcgcta
     3661 catgcccagc aagtgaaaga ggacgaaatg cgctggggct ggcctgcatg gccagagatg
     3721 tatcagaacg tggattcacc agaagtgcgt cagttctgcg aagaacatcg tgatgacgtc
     3781 gatttttatc tctggttgca gtggctggct tacagccagt ttgccgcctg ctgggagata
     3841 agccagggct atgaaatgcc gattggcttg tatcgtgatc tggcggttgg cgtagcggaa
     3901 ggtggggcgg aaacctggtg tgaccgtgaa ctatattgcc tgaaagcgtc ggttggcgcg
     3961 ccgccggata tcctcggccc gttggggcag aactggggat taccgccaat ggacccgcat
     4021 atcatcaccg cgcgtgccta tgaaccgttt atcgagctgt tgcgtgccaa tatgcaaaac
     4081 tgcggcgcat tacgaattga ccatgtgatg tcgatgctgc gtttgtggtg gataccgtat
     4141 ggcgagacgg cagatcaggg cgcgtatgtt cactatccgg tggatgatct gctctcgatt
     4201 ctggcactcg aaagtaaacg tcatcgctgt atggtgattg gtgaagatct cggtaccgta
     4261 ccggtagaga ttgtcggtaa gctgcgcagc agcggtgtgt actcctacaa agtgctctat
     4321 ttcgaaaacg accacgagaa gacgttccgt gcaccgaaag cgtatccgga gcagtcgatg
     4381 gcggttgcgg cgacacatga cctgcctacg ctgcgcggtt actgggagag cggggatcta
     4441 acgttgggca aaaccctggg gctgtatccg gatgaagtgg tactgcgcgg tctgtatcag
     4501 gatcgcgaac tggcgaagca agggctgctg gatgcactgc ataaatatgg ttgtctgcca
     4561 aaacgtgccg ggcataaggc atcgttgatg tcgatgacgc cgacgcttaa tcgtggtttg
     4621 cagcgctaca ttgccgacag taacagtgct ctgttaggac tacagccgga agactggctg
     4681 gatatggccg aaccggtgaa tattcctggc accagttacc agtataaaaa ctggcgacgc
     4741 aagctttccg caacgcttga gacgatgttt gccgatgatg gcgtgaataa gttgctgaag
     4801 gatttggaca gacggcgcag agctgcagcg aagaagcagt agagtgcggt tgatgccgga
     4861 tgcgatgcat ccggcagtca gtgttatcaa atcaccatat tcagcagcag acagcctacc
     4921 agaccgcaca ccgagataat ggtttccagc atcgaccagg atttgatggt ctcgccgata
     4981 gtcaggttaa agtactcttt gaacagccag aagcccggat cgttcacatg agagaaaatc
     5041 acactaccgg aacccaccgc aataaccatc agctccgggc taacacccgt cgttgcaatc
     5101 agcggtgccg cgataccacc cgcagtgatt gccgcaacgg ttgcggaacc cagcgcgata
     5161 cgcagtacgg cagcaatcga ccaggccatc agcagcggag aaatgttggt ttcgtgcatc
     5221 atggaagcaa tgtatttgtc cacgccgctg tctaccagca cctgcttgaa cgcaccgcca
     5281 ccaccgatga tcaacagcat catcgcaatg attttgatgg aagaaaccag cgtgtcgtta
     5341 atctgatcca ttgaacgacc acggttcaga ccaaaggtga acatcgcaat cagcacggca
     5401 atcagcgtag ccattaccgg gtcaccgagg aactccgcta ccggcaggaa agcgtgacct
     5461 ttcggcagga tcatttcggc aatcgcacgc atcgccatca gcactaccgg caccagagag
     5521 gtccagacgc tgacgccaaa gctcggcatc tcttcttcgc tgaaggtttt cgcgctgtac
     5581 agaccttcag ggatcggctt atcgatacct ttcaacacgc gagcgtaaac cggaccggcg
     5641 agaatcacgg tcgggattgc cagaatagta ccgtacagca gggttttacc catgtcggca
     5701 ttgaaaatgg tggcaatcgc agtcggaccc ggatgcggtg gcaggaagcc gtgggtcaca
     5761 gacagtgcag ctgccattgg tacaccaaca tacagcagtg gaatattcgc agaagccgcg
     5821 atggtaaaca ccagcggcag catcagcaca aagcccactt catagaacag ggcaaaacca
     5881 acggtaaaac cggtcagtac caccgcccac tggatgtgtt ttttaccaaa tttggcaatc
     5941 agggtggtgg cgatacgttg tgcgccaccg cagtctgcca gcattttgcc cagcatcgcg
     6001 ccaaaaccca tgatcagggc aaggctaccg agcgtcccgc cgacaccggc tttgatggag
     6061 ccaataactt tatccagcgg catcccttgc attaatccaa cagcaagcgc cacgaggacg
     6121 agagcgatga agccgttcat tttgaaacgg atcatcagga gcaacaacaa gattacaccg
     6181 atagcaacaa tgactaatgg catgatttac ctggcctttc atttgttacg ggtaacgtca
     6241 attttctgac gacaaactct aattatccca atcgggaaca gagatattgc ggcaccacga
     6301 ctgataccca ctaaaactaa ttattgtagt cagatgtcag gagtatgttt ggtacccatg
     6361 tgaatgatac cggtaacatc tggcgtttga gaatcaccag agcggagtaa atttaaatta
     6421 tgagaggttg gtcatattat cgcggagaaa cgaagggagg gatttgccaa agcaatgctg
     6481 cgcccacgtc tggcacatgt tcaacgtagg cccgaaatga cgctttagcg tcgcatcggg
     6541 caatctacaa aagaggggat aacttagtag taggagtgtt cgccgcgctg gtgttcggtg
     6601 agatcgcgca cacctttcag ctccgggaat tcgtttagca gctgcttctc gatcccttct
     6661 ttcagcgtca catcgaccat ggaacaaccg ttacagccgc cgccaaattg cagaatggcg
     6721 taaccgtctt cggtgatttc catcagtgaa acgcggccac cgtgaccagc aagctgtggg
     6781 ttgatctgcg actgcagcat atactccacg cgctccatca gtggtgcatc gtctgccact
     6841 ttacgcattt tggcgttagg cgctttcagt gttagctgag aacccaactg gtcggtaaca
     6901 aaatcgatct ctgcatcttc caggtaagga gcgcttaact catcaacata cgcggtcagc
     6961 aggtcaaatt tcagggcagt gtcggtggct tccacggcat ccggcggaca ataagaaaca
     7021 ccacattcag cgttaggcgt gccagggtta atcacaaata cgcggatttg tgtcccttct
     7081 tcctggtttg ccagcagttt ggcaaagtgc gcttgtgcag catcggaaat acggatcata
     7141 gtaatggcct aatagttgac tattttagtt ggttataata cgcctatcat cgaggctcta
     7201 caaggttcga caaaggcacc agacctggac agtcgccgca ccattgcgta aaagcaactg
     7261 cgcaatctct gcgacggtac ttccggtggt aacgacatca tccacaatca ccatatggcg
     7321 accttgcacg ggcaattcaa gacgaaaggc atttttcagg ttgcgcttgc gtagccgggc
     7381 actgagaaaa tgctgggtcg cagtggcccg tgttcgtgtg acggcttcgc tatcccatcg
     7441 gcagtgcaac cagcgtgata acggctgaca cagcaaatcg ctctgattaa atccccgacg
     7501 ccagtgacgc cgctgccata acggaacgct gatgatgcga tccggcaatt gcaacccggt
     7561 ggtgcgacga gcgtgtaaga cttccaatag taacagacgt gacagggcgc tggcgatttc
     7621 actgcgccgg gaaaatttaa gctggtggat aagcggactt aacggcggcg catagtcggc
     7681 aaccgtgacc agtctttgcc agggcggtgg tttttgcagg cagcgaccgc agggaagatg
     7741 tgagtgtgtg gcgggtaatc cacattgtgg gcataacgtt ttatctgtac gggcggcgcg
     7801 tgagcagacc gaacaaatcc cccaatgacc taacgccagc ggcattcggc atagccagca
     7861 taatcccggt actgttagca tatgttcatc cttgtaagtc aaaagagaac aatagcggat
     7921 gaataacatc tggtggcaga ccaaaggtca ggggaatgtt catcttgtgc tgctgcacgg
     7981 atggggactg aatgccgaag tgtggcgttg cattgacgag gaacttagct cgcattttac
     8041 gctgcacctt gttgatctgc ccggcttcgg gcgcagccag ggatttggtg cgctgtcact
     8101 tgctgatatg gccgaagccg tgctgcaaca ggcacctgat aaagccattt ggttaggctg
     8161 gagtctgggc gggctggtgg caagccagat tgcgttaacc catcccgagc gtgttcaggc
     8221 gctggtcacc gtggcgtcgt caccttgttt tagtgctcgt gacgattggc cggggataaa
     8281 accggacgtg ctggcgggat ttcagcagca actcagtgat gattttcagc gtacagtgga
     8341 gcggttcctg gcgttacaaa ccatggggac tgaaacggcg cgccaggatg cgcgggcgtt
     8401 gaagaaaacc gttctggcgt taccgatgcc ggaggttgac gtgcttaatg gcgggctgga
     8461 aatcctgaaa acggttgatc tccgtcagcc gctgcaaaac gtgcccatgc cgtttttgcg
     8521 attgtatggc tatctcgatg gtctggtgcc gcgcaaagtg gtgccgatgc tggataaact
     8581 ctggcctcgc agcaaatcat atatcttcgc caaagcggcc catgcgccgt ttatttcgca
     8641 tccggtcgag ttttgtcacc tgctggtggc gttgaagcag agggtgtagg caacttttga
     8701 aatggcgaga cagaaattta ctggctcgcc gcagccaact cttcttctga caccccggta
     8761 aagcgcatga tgtctgtaag agggactccg gattcaagca ttattttggc tatatgcagg
     8821 gctttggatt gttccccctc ctgccgcaat ctttccgcaa ttgtcattaa actctccttg
     8881 tgtttcggtg aacgttcggc aacgccgtcg ataaaatcgt taaaacgtac cgcgtcgccg
     8941 gtttgcagta tgtaattaaa cagccctttg atttgtctgt cattagcgta tccactactt
     9001 aataagcagc ccatttgctc tactagcccc atcaggtcgc gttgacgaat atgtttttga
     9061 attaactcca gcagcgccat acgtcggtgc tgcatgattt catcatcagg catgacggtg
     9121 acatcaatca gcggaaatgc ggaggcataa agctgccttg ccagtttggg atcggcgaaa
     9181 caatccagcc aacacagcga atagggatag gggctttcaa taccgtggta aaacaacaat
     9241 ggcaccacca tcggcaacgt tttgtatcca gcatcaaggt gattttgcat tgcggcaata
     9301 gcgtaacgca tcatgcgaaa tgcgatcagt ttgtttgagg tgctttgatg ttcaatcaga
     9361 caatagatgt atcctggtcc ttgttccgtt ttcaccgacc acagcacatc ggaatagctt
     9421 tcacgcagat cgtcatcaat aaagctgctc gactccagct tgagggtttt catatcacaa
     9481 agcgcgtgaa tgggtgccgg taaatgaaac gcaagaaaat cacgagccgt gtccggttgg
     9541 cgtaaaaaga gtttgaacag cgcatcgtgt ggggtggaac tctgcttttt gctcatggcg
     9601 ttccttcacc tgttgtttga atgccgcgac tctacgcgcc actccacacc tgtgtattag
     9661 cgagttttca tccctgcgag atgctttcaa aggaacttac gccgtgctgc aagagttgca
     9721 tttttatgga aagccgcacg caaaaaagcc cggatgcaga cgcataccgg gctttccaaa
     9781 acaggcgatg gagtaaggtt aacgaagcgc ccaccactcg cgcagacagg cttttccttc
     9841 cgggcagctt ttacaactgc cagagaggca gccgtcaggt tcttcctgaa tccgcacggc
     9901 tttgcccata ctttccagtt gttgcagcat ggcgttaatc attggctgtg gagtgttcaa
     9961 tgtctggctt atctgggccg cttccatacg gccccgtaac gccagcaaat cgcgcacctg
    10021 aataagtgaa gccattaatg gcaatcaccg gtggtgctgg ctgcgcagca actgcttacc
    10081 gacttgcggg ttgccagcag ttcgatatcc acccggctac gcgcgcggcg cagcagaccg
    10141 ataaccacga tgttaaacag gataaccgcc agaatgcaca ccaggctgta agttgggtgc
    10201 tgactgtagc tggcgacctg atagaacaat gttgccagcg agtaagcgat attcagcccc
    10261 cacaggatgg agaagcccat ccagccacgg cttgattcac gggcgatggc tcccatcacc
    10321 gagatacatg gtacatacag caggacgaaa atcaggtagc tgtaagctgc tgctgcgcta
    10381 ccgaatttct gatccatcac gcccatcgcc ccggtaccca tttcgccgtt gcctttgctg
    10441 gcttcaatgg ggttcatcag tacgctaagg ctgaaggtgt ctttcaggct ctgccaggtt
    10501 tcatctatcg cactgaacag ctcttcaccg aggttaaact ctgccggatt gaactcttcg
    10561 tcctgaatat tttctgcggt gtagagggtg ttgagcgtac ccactaccac ttctttcgcc
    10621 atggcacctg taaacaggcc aaccgttgcc tgccagttat cttcatgcac gccaattggc
    10681 ttgaagaccg gggtgatcac ccggctgacg gacgccagcg ccgagtcgtt gatgttatcg
    10741 acgattttcc cgctcagcga gaagctgttg aaagcgctca ggaaaatgct gacgatgatg
    10801 atcactttac cagcacgcag aacgaagcct ttcagacgct gccaggtctg gataatcagg
    10861 cttttaacgt gtggtacatg atagaccggc aactccatga caaacggcgt cgcttcaccg
    10921 cgcatgatgg tgtacttgag catcaggcca gtcagcaccg ccatcacaat acccagcata
    10981 tacagcgaga agaccgccag cgcaccgttc tgcccgaaga aggcagccgc gaatactgcg
    11041 aagatagcca gacgcgcgcc gcaggacata aacggtgcca tcatgatggt catcagacgt
    11101 tcacgcggtg catcaagcgt acgtgcaccc attaccgacg gtacgttaca accgaaaccg
    11161 acgatcagcg gcacaaagga tttccccggc aagcccagcg cctgcatcag acggtccatc
    11221 acaaacgccg cacgcgccat atacccggag tcctcaagga aggagaggaa caggtacatc
    11281 atgccaatct gcggcaccag tggcagcacg gtgttaatgc cgccacccag gccctgggcg
    11341 aggaagatag tcagccagtc cgggaagtgg agcgtgtagc caatccattg aataccatgc
    11401 acaaatagcg ccacggagcc gacgtcaaac agcggctgta acgccccgcc gatgttgata
    11461 gccagcagga acatcaggta catcacaaag aggaaaatcg gcagaccgag gaaacggttg
    11521 agcacgattt tatctaccgc agtggtgaaa cggctgggtt ctgccgtcag ggtgttgctt
    11581 accacatcac agatggcagc aatgcactgg taacgcgcat cggcaatgtg cagcgccgga
    11641 tcgtccatct cattacgcag acgggcgagg gcggcatcca gatgctgcga cgcttcaccg
    11701 gcgtaggcgc ggctgtagat atcgccttcc agcatttgca ggcccagcca gcgacgttgt
    11761 ttcagcggga tgtcggaagg catcactttt gccagtgaat ctgcttcgtt gagcagcggc
    11821 tgtgcgtaat gcaccagttc cacattctcg ttagctttat agcgatcaat cgccagcttg
    11881 agcgcttcaa taccgcgacc acgggttgaa accagcggga tcaccggaca gcccagacgc
    11941 gccgacagag catcaatttc aatacgaata ttttgcttct cggcaatgtc gagcatgttc
    12001 agtgccacaa tgcagggaat gccgagttcc agcagttgta gcgtcaggta caggttacgc
    12061 tcaaggttag acgcatccac cacgttaatc agcaggtcgg cgtcgccact caaaatgtag
    12121 tgacaggcga tttgctcatc gagcgaggtc tgcgatgaga tggtggtcag agaataggtg
    12181 ccgggtaggt ccaccagcgt gacctgatga tcggtggtgg agaattgccc ttctttacgt
    12241 tcgacggtaa cgccagccca gttacctaca cgctgacgtg cgccagtgag ctggttaaat
    12301 aaggttgtct tgccagaatt tggattacca attaagccta tggttaattt tttcattgtt
    12361 gttatcaccg tattaacagg aaaccgcttc cacttctaat aaggccagat cttttttgcg
    12421 taataccagg ctcacacgac gggtttcgat atgaatgggg tcgccgagtg gagcgacgcg
    12481 caccacatta aaagaggagc caggtaacat gccaagagaa agcagttttt ggcgatatgc
    12541 cgggctgatt tcacgggaaa agccagtgat tttccacgca gtatctggag tgtattgcat
    12601 aggtgcctac ttgtttctca ttaactggat aactacctca tggggcgttt gacagcgaca
    12661 tgagaccaga tgatttgcca acaaaggaga gattaaataa tcaataacac aatgataatg
    12721 agaatggttt ctatcagcaa tacttaaaat gtgtgcgaat gttggtttga ataataatct
    12781 gactcaatgt tgatgtggct caaggttata tcgcagcgaa aatataattc gaatagtgaa
    12841 ttacccggac tggctaatgt ttaattaagg tttcagttgt taatgaagtg ataaatattg
    12901 ccggaatata ttatgagttt ggt
//
LOCUS       DADKRT010000123        12658 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.124, whole genome shotgun sequence.
ACCESSION   DADKRT010000123 DADKRT010000000
VERSION     DADKRT010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12658
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.124"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(4..324)
                     /gene="chbB"
                     /locus_tag="JQ356_002922"
     CDS             complement(4..324)
                     /gene="chbB"
                     /locus_tag="JQ356_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HAY4622948.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAVIKK
                     AAAN"
     gene            complement(622..960)
                     /gene="osmE"
                     /locus_tag="JQ356_002923"
     CDS             complement(622..960)
                     /gene="osmE"
                     /locus_tag="JQ356_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HAY4622949.1"
                     /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAAK"
     gene            1162..1989
                     /gene="nadE"
                     /locus_tag="JQ356_002924"
     CDS             1162..1989
                     /gene="nadE"
                     /locus_tag="JQ356_002924"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HAY4622950.1"
                     /translation="MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV
                     LGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDR
                     PSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK"
     gene            2219..3106
                     /gene="cho"
                     /locus_tag="JQ356_002925"
     CDS             2219..3106
                     /gene="cho"
                     /locus_tag="JQ356_002925"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HAY4622951.1"
                     /translation="MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGES
                     DTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIA
                     DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
                     PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPL
                     LSGNYEITELDPANDQRAS"
     gene            complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JQ356_002926"
     CDS             complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JQ356_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="environmental stress-induced protein Ves"
                     /protein_id="HAY4622952.1"
                     /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
                     ANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQM
                     SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFD
                     GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
     gene            complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JQ356_002927"
     CDS             complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JQ356_002927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HAY4622953.1"
                     /translation="MRKLTALFVASTLALGAANLAHAAAPADAKPMMHHKGKFGPHQD
                     MMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIVSDTFDKAKAEAQIAK
                     MEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE"
     gene            complement(4644..5612)
                     /gene="astE"
                     /locus_tag="JQ356_002928"
     CDS             complement(4644..5612)
                     /gene="astE"
                     /locus_tag="JQ356_002928"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HAY4622954.1"
                     /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG
                     ALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDM
                     NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV
                     LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG
                     QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM
                     PFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS"
     gene            complement(5605..6948)
                     /gene="astB"
                     /locus_tag="JQ356_002929"
     CDS             complement(5605..6948)
                     /gene="astB"
                     /locus_tag="JQ356_002929"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HAY4622955.1"
                     /translation="MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQ
                     GLLKMKTLADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSS
                     ASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFS
                     VHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREAS
                     EAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLAN
                     LRARVNGFMAIEVPATQVSVSDAVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGY
                     LNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFN
                     ALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQREGGGNG"
     gene            complement(6945..8423)
                     /gene="astD"
                     /locus_tag="JQ356_002930"
     CDS             complement(6945..8423)
                     /gene="astD"
                     /locus_tag="JQ356_002930"
                     /EC_number="1.2.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
                     /protein_id="HAY4622956.1"
                     /translation="MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACR
                     AARAAFPRWARLSLAERQVVVERFAGLLESNKAELTAIIARETGKLRWEAATEVTAMI
                     NKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL
                     AGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLF
                     TGRANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQR
                     CTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAW
                     QQLEAMGGRTLLAPRLLQLETSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEA
                     ILMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGN
                     HRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR"
     gene            complement(8420..9454)
                     /gene="astA"
                     /locus_tag="JQ356_002931"
     CDS             complement(8420..9454)
                     /gene="astA"
                     /locus_tag="JQ356_002931"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HAY4622957.1"
                     /translation="MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAI
                     KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWHNYRVGTLVHASKELN
                     VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV
                     AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
                     QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE
                     VAEGQPAQGDFPACLVANENYHHFRVVLARTDPATERLILTAAQLDALKCHAGDRVRL
                     VRLCAVEKTA"
     gene            complement(9451..10671)
                     /gene="astC"
                     /locus_tag="JQ356_002932"
     CDS             complement(9451..10671)
                     /gene="astC"
                     /locus_tag="JQ356_002932"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylornithine/acetylornithine transaminase"
                     /protein_id="HAY4622958.1"
                     /translation="MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDF
                     AGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFC
                     NSGAEANEAALKLARKFAHDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAP
                     LPPDIRHAAYNDINSASALIDDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNA
                     LLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVG
                     THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRG
                     LGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDR
                     FAAACEHFVSRGSS"
     gene            11117..11923
                     /gene="xthA"
                     /locus_tag="JQ356_002933"
     CDS             11117..11923
                     /gene="xthA"
                     /locus_tag="JQ356_002933"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HAY4622959.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGN
                     VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK
                     GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
     gene            12090..>12658
                     /locus_tag="JQ356_002934"
     CDS             12090..>12658
                     /locus_tag="JQ356_002934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY4622960.1"
                     /translation="MNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG
                     LFGYSLYILLFIIATLFLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARW
                     LGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWP
                     YTLISALTTLPGIVIYTVMASDLANEGITL"
BASE COUNT         3077 a         3426 c         3097 g         3058 t
ORIGIN      
        1 aaattaattt gctgcggctt ttttaatcac tgcaaccgca gccttaagca cgcctaaacc
       61 atcgactttg ccataaagca gcgagtcaat tacttcaacc ggtttgttgg gtaacaaacg
      121 ctggatttcg ggcaacatat aagcaatctg cggccctaat aacacgacat cggcattctg
      181 acctttttca ccagccagtg tttccggaaa tgcttcaata atgaccggaa cttcatattt
      241 ttctgcctgt gcgcgcattt ttgataccag taaagaggta gacatgcccg cagaacaaaa
      301 cagataaatg tgtttctttt ccataaaact gccctcatcg acgattatct gtcagccaga
      361 cactccgcaa gccttaacct gcttccatgc tctgggtaac ttgcgaaacc aacatgactt
      421 tttttgtggc tgaaaggagt atacggtata gacctgagca atagtatttc tttgacctta
      481 taaattgtct ctccttgacc tgcggttatg accctcttca catttcgggc aaataattcg
      541 cgaagataat taagaactca ggccaaaaaa accggcgcaa tggccggttt ccgttgttac
      601 tcaagctttc aaacgaagtg attacttcgc agcctgtgga tcagtgtcgt attcagcaca
      661 ggtctgataa ccggagttga tgacatgtcc ggtatcatct aacgcgacaa agtaggtttc
      721 tgctttacca tcacgttgac ccaggatgta ggtctggcaa gtaccacgag catggatcat
      781 gctcacttca gacgaaggtt tacccgcaat ttgtgcaacc tgcgcccggc tcatgccttt
      841 tttgacgtct ttcaccacag gctgtacaaa ctggtctttg gtacgatcat aagccgtaca
      901 acccgccagc atggttaata ccgccgctgc actcagaatt cctgccatat tcttgttcat
      961 attccgtcct cttgtttatc agcgtgttag ataagcctgg aatacattgg gcgctttttc
     1021 aagcccgtga acgaaacggc tccgctttca gaggattcct gtatgacgtt ttatccacca
     1081 ttcaacccgc tgtcgcttgt cgtttcagta gcgacgggtt agctttaagg aagttttgtc
     1141 ttttctgtct ggaggggttc aatgacattg caacaacaaa taataaaggc gctgggcgca
     1201 aaaccgcaga ttaatgctga agaggaaatt cgtcgtagtg tcgattttct gaaaagctac
     1261 ctgcaaactt atccgttcat taaatcactg gtgctcggga tcagcggcgg tcaggactcc
     1321 acgcttgccg gtaagctgtg ccagatggcg attaatgagc tgcgccagga gaccggcaac
     1381 gaatcactgc aatttattgc cgtacgcctg ccctatggtg ttcaggccga cgaacaagat
     1441 tgccaggatg ccattgcctt tattcaaccg gatcgcgtat taaccgttaa tatcaagggc
     1501 gcggtattgg ccagcgaaca ggcgctgcgc gaagcgggca ttgaactgag cgattttgtc
     1561 cgtggcaatg aaaaagcgcg tgagcggatg aaagcacaat atagcattgc gggtatgacc
     1621 agcggtgtcg tggtgggcac cgatcatgca gcagaagcta ttaccggatt cttcactaaa
     1681 tatggtgacg gcggtacgga cattaatccg ctgtatcgtc tcaacaaacg tcagggtaaa
     1741 cagttactgg cggcattagc ttgcccggaa cacctttata agaaagcgcc aacggccgat
     1801 ctggaagatg atcgcccttc tctgccagat gaagtggcac tcggcgtgac ctatgacaat
     1861 atcgacgact atctggaagg gaaaaacgta cctcaacagg tcgccagaac aatagagaac
     1921 tggtatctga aaaccgaaca taaacgccgt ccgccaatta ccgttttcga tgatttctgg
     1981 aaaaagtaat aatttgcaca tattggattg tgcgaaaaag agtaatttgt tcacgccgga
     2041 tgcggcgtga acgccttatt cgacctataa aactatgcaa attcaataca ttgcaggagt
     2101 cgaataggcc tgacaggcgt agcacgtcag acggtgtaac ctttgtcatc gacccgcctc
     2161 ttttttaatc gcttcccgcc tgttacactg gatagataac cagcattcgg agtcaacagt
     2221 ggtacggcgt ttaacttctc cgcggctcga atttgaagct gcggcaattt atgaatatcc
     2281 cgaacattta cgttcattcc ttaatgactt acccacccga ccaggggtgt atctgtttca
     2341 tggtgaaagt gacaccatgc cgctctatat cggcaaaagc gttaacatcc gcagccgcgt
     2401 cctttctcat ttacgtaccc cggatgaagc cgccatgcta cggcaatccc gacggatcag
     2461 ctggatatgt accgccggtg aaatcggcgc tctgctcctt gaagcgcgat taatcaaaga
     2521 acaacagccg ctgtttaata aacggttgcg ccgcaatcgt cagctctgtg ccctgcaatt
     2581 aaatgaaaag cgcgtcgatg tggtgtatgc caaagaggtg gatttttcac gagcccccaa
     2641 cctgtttggc ctgtttgcca ataggcgcgc agctttgcaa gcattgcaga ccatcgctga
     2701 tgaacaaaaa ctttgttatg gcctgctggg actggaaccg ttaagtcgcg gtcgtgcatg
     2761 ttttcgttca gcgctaaaac gttgcgccgg agcatgctgc ggtaaagaga gccatgagga
     2821 acatgcgcta cgcttgcgcc agtctctgga gcgtttgcgg gtggtgtgtt ggccttggca
     2881 aggggcggtg gcgctgaaag aacagcaccc ggaaatgact caatatcata ttattcaaaa
     2941 ctggctgtgg ctgggggcgg ttaattcgct ggaagacgcg acaacgttaa ttcggacacc
     3001 cgccgggttt gatcacgacg gttataaaat tctttgtaag ccgctgcttt ccggtaacta
     3061 tgaaattact gaacttgatc cggcgaatga ccagcgagcc agttgatttc actgaacaac
     3121 agtttacctt gcggttgtaa aagccgcagg gtgtgcctgc catcgaacca gcacgcgccc
     3181 tggtcggtag tgagcaattt atcgcccagt tgccacgccc cgttaatcac aaacaccacc
     3241 ccgccgcgtg agccaaaggt agtaaacgta cgttcggcaa ttctgacttt cgccttacag
     3301 acatccaggc gtgtcatgat gttgaaatcc atcgacatct gcccttccgt cagtttcgct
     3361 tttaccacct ggtccgctgc aaaggcaaaa ggctgtaacg gttttaaggt atggttaaag
     3421 cggtctgcgc tttcaaggag catctcgccg ccttccagca acgtcactat cctttccatg
     3481 ccgggaaaca aagaaaactc cccattcgcc gcgatggatg caatgctggc acgccagtaa
     3541 aaatcacgtt ttgccggtgg gaaagtgcaa atttcgcgcg tttcaccggc agcatttcgc
     3601 cacagattca ccgacatttt acgcatatca aagtattcca tactcgctcc cggcccgttc
     3661 ttttcattgt tatcgttcag gtaaccgtgg atggttatcg gcaactcggg tgatttacgt
     3721 tagtggtgat caggcttttt ttacaactgt ttgagaagag aaaagaaaac cgccgatcct
     3781 gtccaccgca ttactgcaag gtagtggaca agaccggcgg tcttaagttt tttggctgaa
     3841 agattattca gcagttgcag gcattttacc ttttgccgct ggacgttctg tcagacgctt
     3901 ctcaaaatta gcattaaatt gctttttctg ttccggcgtc aggatgttgt aaattttgtt
     3961 ctgggtttcc atgtgcgcca gcatgttagc tttgcgctgt tcttccattt ttgcgatctg
     4021 cgcttcagct tttgctttat cgaaggtatc gctgacaatg atgtcatgca ttgcgcggcg
     4081 ttcttccagc ggcggacgtt tcatctggtc acgctggcct ttcatgattt cgcggatctg
     4141 ctgtttctgc gcgtcggtca ggttcaggtc tttgaacatc atgtcctgat gcggaccgaa
     4201 cttgcctttg tggtgcatca tcggcttcgc gtcagccggt gctgcggcat gggccaggtt
     4261 agccgcgcca agagccaggg tagaggcaac aaacagtgca gttaatttac gcatattcta
     4321 tatccttcct ttcagttatt tattacggct ttcttaagta gcgtgccgtg ttgacaagat
     4381 taactttact gactttagcg tcaattaatc agagcaacgg taaaacaatg aaagtgtaaa
     4441 aaacactttt gcgccaatta tggagaaaaa aagaaaattt gatggagagt gatgagagaa
     4501 tattacaaca caatgatttt gcagagatta tgaagaacta tactggatga ctggtgataa
     4561 ataaagcaaa taaccaggat taatctgtat taatttataa gaaagcaact taatacccgc
     4621 agaatgattt ctgcgggtaa gtattagctt attttttcga gcattaatcc cgcgcgtaat
     4681 cccaacgcta ccaacggatt agggaataac acatactcta catcatgggt tacggtaaaa
     4741 cgttcctctc cgtcctgcgc cagcaatgtt cctttctcaa acggcataaa attcagcgtg
     4801 tcacttgcca tatgcatttc gaaggacggc gagtgacgag taatttgcga aaccacccga
     4861 taacggagcg gcggtgttct cacgataccg acactctcac cagatagcag cgcagcaatt
     4921 gcgctggcag ttactgcaaa ctggcgaaga tcgttttgcc caaagggcaa cgctttgcca
     4981 agttccagcg tacaggccag cgcgccaaaa tgtctggcgc tgaaatgggt aaacgtacca
     5041 ccaggttcct gatggaacac cagcgcctcc agccccgccg cacccagcca cgtcagaaat
     5101 ttctcgtccc agggaatgtc gcgttgcggt aatacaccga actgcggatg caaggagcca
     5161 cgaattgcgg tatgtagatc aaggtgccag cgcacagatt ctttgccctg gtcataaaaa
     5221 tcttccaggc actgttccag ttcgcgcgcc cgacaggttt ctccgctttc agcaaatagc
     5281 tgccaacgac cgccaaacat tcgattcata tcgctatggc aataacgttt cccttgcttc
     5341 agcgcaggag gattcccgag gatcaccagc aaccgccaac gtaacgggat ctcgccgtga
     5401 gatatcgcgc caagcaacgc gtccagcatt tccacaggtg ccgtctcatt accgtggatc
     5461 cccgcagaaa tcaccagcgc gccttgcggt ggcgttaatg gcgtcagttc cagcacacca
     5521 tcgcccagcc agcgccagcg aacgccgttg atttctcgct cggtgataac cggtttttta
     5581 cccgttaagg tcagagcaag aaaattatcc attgccccct ccctcgcgct ggaacggata
     5641 aaccgaaccg agattcagta attggctcaa tacatccagt gcttcccgcc cttcgcgcag
     5701 caattgcggg tcggccagat cggcagcagt aagacgatcg cggtagtaac gatccaccca
     5761 gtcattgagc gcattaaaca aggtatcgtt catcatcacc gccggattca ccgcccggcg
     5821 ttcttcttct gtcaatacca cccgcaaccg caggcacgcc gggccgccgc cattcgccat
     5881 gctttcacgt aagtcaaaga cttttagttc gctaatcggg ttgtcagcgg caaggagttc
     5941 attgagataa ccccatactc cggcgtgttc ccgacactcc tgaggcagca ccaacatcat
     6001 ggaaccatca tcgcggctca acagttggct gttaaacaga taggtagaca ccgcatccga
     6061 cacggaaacc tgagttgccg gaacttctat cgccataaaa ccgttcaccc gcgcccgcag
     6121 gtttgccagt aactgtgact ggcgagcgaa cgcctgttgg tggcaaaaca gcacctggcg
     6181 gttacttacg gcaatcacgt cattatgaaa aacaccctgg tcgataacgt ccgggttttg
     6241 ctgggcgaaa atcacctgtt ggggattcac ctgattaagc cttgccaccg cctcgctggc
     6301 ttcgcgagtc tgtcgcgccg gataacggga aggccgggta tcattgcctt cttctcgccc
     6361 gtagacaaaa agttgcatac ccggctcacc gtaatgaccg ccgagacgat tgtggtttgc
     6421 cgccccctca tcaccgagca acgctacctg cggcaacgcc gaatggacgc taaatttctc
     6481 ttcgtcgtta aaaatagctt ttaacagcga ttcagtgacg ggcgcttcca gcgaacggtg
     6541 aaatttattg ttcaggttgg caacggtgag atgcactttg ccatccagcg tatcggcaga
     6601 tggcgcgatc gttgccgcat tggctaccca cattggcgaa gcggagctga cgctggaaag
     6661 ccagtgcggt gcctggcgtg caactttttc cagtacctgc tcatcgctac cactgaatcc
     6721 caactgacgc agcaccggaa taaacggacg ctcgtgcggc gggatcacgg cctgggggaa
     6781 tcctgcatcg gcaagggttt tcattttcag taagccctgt ttcgccgcca gtcgcgggtt
     6841 agacacctga aaacggtgac gggtagaggc ttcattacca aacgacaggc cagcgtaatg
     6901 atgcgtcagc cctaccagcc cgtcgaaatt aacttcccag gcgttcatcg caccacctca
     6961 tcggaaaaat ccagcccggg gttaagcgtt gcgggcaaag ttaacgagtc cgactccagg
     7021 ctcgccatag gccatgcgca gtaatctgcg gcataccagg cgctggggcg atggttaccg
     7081 gatgcaccaa tgccgccgaa tggcgcggta ctggcagcac cagtaagcgg tttgttccag
     7141 ttaacaatcc ccgcccgcgc ctccagcaac agttgatcga atttttcccg ttcgggggaa
     7201 accagaccgc aagagagtcc gaagcgagtg ttattcgcca ttagaatcgc ttcctcgaaa
     7261 gaatcataac gccagacgcg caataacggt ccgaacacct cttcatctgg tacgccagca
     7321 acgcctgtca tttcaatgat ccccggcgtc agcaacgatg tctctaattg taataagcgc
     7381 ggcgcaagca gggttcgtcc gcccatcgct tccagttgct gccaggcagt aaccacctgc
     7441 tgtgcggcct gttcagaaat cagcccgcca ataaacggct gcggttcgtc atcccagttg
     7501 cccggcgtta atcgctggct gacggcaacc agacgagcaa gaaacgcatc gccctgcgct
     7561 ccgcttttga gcaataaacg gcgggcgcag gtgcagcgtt gcccggctgt gacaaacgcc
     7621 gactgaatgg tcagatggac agccgcgtcg atatccgcca cctcatcgat aattagcgga
     7681 ttattaccgc ccatctcaag ggcgagaatt ttctccggct gaccggagag ctggcgatgc
     7741 agctggtagc cggtattggc gcgaccggta aacagcaaac cgtcgagatc ctccagcgca
     7801 ctcagcgcct gacccgtttc acgcccgccc tgcaccaggt tcagcacgcc cggcggcaag
     7861 ccagcctgct gccataaacg cattaccgct tcgccactcc acggtgtcag ttcgctgggt
     7921 ttaaagataa tggtgttacc tgccagcaat gccggaacga tatgtccgtt cggcaaatga
     7981 ccagggaaat tatacggccc aaacaccgcc agcacgccgt gcgggcgatg tcgcaggctc
     8041 gccgcaccgt ccggcatttc actacgctgc tcgccggtac gaacgtgata cgccttaatt
     8101 gatatcgcga ttttattgat catcgccgtc acttcggttg ccgcttccca gcgcagctta
     8161 cccgtttctc tggcaataat cgcggttaat tcggctttat tgctttccag caatccggca
     8221 aagcgttcga caacgacctg acgttcagcc aatgagagcc gcgcccagcg cggaaacgcc
     8281 gcacgggctg cccgacaagc ctgttcgacc tgagcggcat cggcatcatt gccttgccat
     8341 aacacctcgc ccgataccgg attacgcttc acacgcgatg cgccctggcc cgttatccag
     8401 tcaccgttaa tccataaagt catgctgttt tctccactgc gcacaggcgc accagacgaa
     8461 cgcgatcccc tgcgtggcat ttgagggcat ccagttgtgc ggcggttaaa atcaaacgct
     8521 cggttgccgg atcggtacgc gccagcacca cgcggaaatg gtgataattt tcattggcga
     8581 ccaggcaggc cggaaaatcg ccctgcgcag gctgcccttc tgccacttcc accagccgac
     8641 ttttacggat ggcgcgcacg cggtcgatgt cacactcaag cgttggcccg ccgtcgaaga
     8701 tgtcgatata gttgcggtaa cgaaaacctt ctttctccag caccgcgcgg gcaggcgcgg
     8761 tttgcggatg tacctgaccg atgacgtcct gggcttcctg ggataaaaag tgggtataga
     8821 tcggatgttt cggcatcagt tctgcaataa atgccttttg cccggtgccg cagagaaaat
     8881 cggcgcggct aaaatccatc gaaaagaagc gtttaccgag gctttgccag aacggtgaat
     8941 agccgtgttc gtcaatcacc ccgcgcattt cagcaaccac tttgtcatta aacttgtcgc
     9001 gaaaagccgc cataaacata aagcgcgatt tcgacagcaa atagccgttg ccctctttgc
     9061 gccagtccgg gtcgagaaac agcgtgcaca gctcgctgct gccggtgtga tcgttactaa
     9121 gaaacagcgt cggcaatgcg ttatagacat tcagctcttt tgaggcgtga accaacgtgc
     9181 cgacccgata gttgtgccag ggatcgttca gcccaaccgc cacctcaatg gcgcaaatcc
     9241 ccgccacggt gcctgtctcg ctatcttcca gcacgaacac atagccctgc tcgcttttgg
     9301 gcagttcgcc ttgccaggtt ttgattgccc tttcgatacg cgcggaaagc gtggcttcat
     9361 tagcgggaag cgacgtcagg ccgccgcccg ttttgctggc aagctgcatc agcgccgaga
     9421 catctgagcg ctcaacggga cggatgacca tcatgatgaa cctcggctaa caaaatgttc
     9481 gcaagcagct gcaaagcgat ccagtccggt cgtcacctct tcttcgctga cattgagcgc
     9541 aggcgcaaaa cgcaccacgt tgccacccgc aatcagtacc ataacgcctg ctttcgccgc
     9601 ctcctgagag atctgtttcg cttgtccggc gtaatcggca ttcagtacac agccaatcaa
     9661 caaacctaag ccgcgaactt cactgaacaa accgtagcgg tgattaatgg tattaagacg
     9721 ctcaacaaac cagtcgtgac gctgtttaac gccattaagc atctctggtg tgttgatgag
     9781 ctccagcact ttgcccgcca ccgccgaggc cagcggattg ccgccatagg tggtgccatg
     9841 agtgccaacg gtcatcacgc tggcgcactc ttcggttgtt aacaacgcac cgaccgggaa
     9901 atcgccgccc agcgctttgg cggtagttaa cagatcaggt gtcacgccgt agtgcatata
     9961 ggcatacagt tccccggtgc gcccgacgcc ggtttgtact tcatcaaaaa tcaacagcgc
    10021 attgtggcgg tcacacaatt cacgcagacc ttgtaaaaac gcgttgctgg ctggcaccac
    10081 accgccttcc ccctggatgg gttcgacaat caccgcacag gtggcgtcgt caatcagcgc
    10141 gctggcagag ttaatatcgt tatatgcagc atgacggata tctggtggca gtggcgcaaa
    10201 atcctgtgaa taggctggct gcccacccgc actgacagta aacagcgtgc gaccatgaaa
    10261 cgcattttta aacgccatga taccgctctt atggctgccg tagcggtcgt gagcgaattt
    10321 acgcgccagt tttagcgccg cttcgttggc ttccgcaccg gagttacaaa agaagacgcg
    10381 atcggcaaac gtggcgtcga tcaatttttt cgccagtcgc agtaccggct cgttggtgta
    10441 accgttgccg gtatgccaga acttactcgc ctgttcgttc agcgcttcac gcagttccgg
    10501 atgcgcatgg cccagcgcgt tcaccgcaat gccacccgcg aagtcgatat actctttccc
    10561 ctgctgatcc cacaagcgcg aaccttcgcc acgtaccggt ataaagggtg ccggagcgta
    10621 aacaggtatc atccattcat caaagttttc acgcgtaatt ggctgagaca tagcgacctc
    10681 tacagtaaat aattcgttat ttatatgtta acaataagta atgtttgcgc tgtaaatgta
    10741 gattgcaggg ttcgtgccag ccagtgataa aagtgcataa acggcggagg ctaactggaa
    10801 atcaaggagt tataaccaaa ccatatgcat ttaaagtgca tataaagtga atacgtttgc
    10861 gatgtgggtg aataaaaaga ataaaaaacg caatgttatg cagaagtaaa atataattct
    10921 ggaattgtga tcattgacga aatttactgg aaattactgc gccattctga cgcagcgcgc
    10981 accaaaagcg ggcatttttt gcgccatcgt tgacatcatt aacaaccatc gatcaaatca
    11041 cttaacaaca ggcggtaagc aacgcgaaat tctgctacca tccacgcact ctttatctga
    11101 ataaatggca gcgactatga aatttgtctc ttttaatatc aacggcctgc gcgccagacc
    11161 tcaccagctt gaagccatcg tcgaaaagca ccaaccggat gtgattggcc tgcaggagac
    11221 aaaagttcat gacgatatgt ttccgctcga agaggtggcg aagctcggct acaacgtgtt
    11281 ttatcacggg cagaaaggcc attatggcgt ggcgctgctg accaaagaga cgccgattgc
    11341 cgtgcgtcgc ggctttcccg gtgacgacga agaggcgcag cggcggatta ttatggcgga
    11401 aatcccctca ctgctgggta atgtcaccgt gatcaacggt tacttcccgc agggtgaaag
    11461 ccgcgaccat ccgataaaat tcccggcaaa agcgcagttt tatcagaatc tgcaaaacta
    11521 cctggaaacc gaactcaaac gtgataatcc ggtactgatt atgggcgata tgaatatcag
    11581 ccctacagat ctggatatcg gcattggcga agaaaaccgt aagcgctggc tgcgtaccgg
    11641 taaatgctct ttcctgccgg aagagcgcga atggatggac aggctgatga gctgggggtt
    11701 ggtcgatacc ttccgccatg ctaatccgca aacagcagat cgtttctcat ggtttgatta
    11761 ccgctcaaaa ggttttgacg ataaccgtgg tctgcgcatc gacctgctgc tcgccagcca
    11821 accgctggca gaatgttgcg tagaaaccgg catcgactat gaaattcgca gcatggaaaa
    11881 accgtccgat cacgcccccg tctgggcgac cttccgccgc taatttagca gctctcctgg
    11941 ctcaaactgg gtcaggagaa ttaaccttga gaaaaatcaa caaactgtca gtaatgattt
    12001 gttgcctgcc gtcctttgtt ataccgtcac tgcgttttta gttgtctgac cacttctcta
    12061 ttatcaagtt tgatatagga aactccacga tgaatgctga gcgtaaattt cttttcgcct
    12121 gtcttatttt tgcgctggtc atttacgcta tccacgcttt cggtttattc gatctgctca
    12181 ccgatttacc ccacttacag acactcattc gccagagcgg attgttcggt tatagcctct
    12241 atattctgtt attcatcatt gccaccctct ttctgttacc aggaagcata ctggtgatcg
    12301 ctggaggaat agtttttggc ccgctcttag ggacactact ctcattaatt gccgccacgc
    12361 tggcctcctc gtgctcattc ctgctggcgc ggtggctggg acgtgattta ctgctgaaat
    12421 acgtgggcca tagccatacc ttccaggcca ttgaaaaagg cattgcgcgt aacggtattg
    12481 attttcttat tctgacccgc ttaatcccgt tgtttcctta caatattcaa aattacgctt
    12541 acggattaac caccatcgcc ttctggcctt atacccttat ttcggcactc acgaccctgc
    12601 ccggtattgt tatttatacc gtgatggcaa gcgatctcgc caatgaaggc attacgct
//
LOCUS       DADKRT010000124        12602 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.125, whole genome shotgun sequence.
ACCESSION   DADKRT010000124 DADKRT010000000
VERSION     DADKRT010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12602
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.125"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(14..520)
                     /gene="mug"
                     /locus_tag="JQ356_002935"
     CDS             complement(14..520)
                     /gene="mug"
                     /locus_tag="JQ356_002935"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HAY4622961.1"
                     /translation="MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA
                     GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ
                     ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD
                     QALVVRGR"
     gene            645..720
                     /locus_tag="JQ356_002936"
     tRNA            645..720
                     /locus_tag="JQ356_002936"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:678..680,aa:Ile,seq:cat)
     gene            complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="JQ356_002937"
     CDS             complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="JQ356_002937"
                     /EC_number="1.16.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent ferric chelate reductase"
                     /protein_id="HAY4622962.1"
                     /translation="MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG
                     FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID
                     FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
                     LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYF
                     IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK"
     gene            1826..2449
                     /locus_tag="JQ356_002938"
     CDS             1826..2449
                     /locus_tag="JQ356_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HAY4622963.1"
                     /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG
                     GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
                     TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
                     NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD"
     gene            complement(2603..4123)
                     /locus_tag="JQ356_002939"
     CDS             complement(2603..4123)
                     /locus_tag="JQ356_002939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY4622964.1"
                     /translation="MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFT
                     LQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM
                     VREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLP
                     LRWRARGVMTLMFILLAAMLWFVAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQ
                     ALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK
                     GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSIIASNAAVQGGEAM
                     TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDVSADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
                     HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            4429..5919
                     /gene="ygjG"
                     /locus_tag="JQ356_002940"
     CDS             4429..5919
                     /gene="ygjG"
                     /locus_tag="JQ356_002940"
                     /EC_number="2.6.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
                     /protein_id="HAY4622965.1"
                     /translation="MITTFVFIPIFAIAAGVAQSLQYLNRYHVIREPPEHILNRLPSS
                     ASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGA
                     VEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLD
                     PLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFH
                     GKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEP
                     IQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILC
                     LAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNL
                     LAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRV
                     LVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA"
     gene            complement(5961..6293)
                     /locus_tag="JQ356_002941"
     CDS             complement(5961..6293)
                     /locus_tag="JQ356_002941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HAY4622966.1"
                     /translation="METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQ
                     TVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERM
                     MPAGVRVV"
     gene            6512..7495
                     /gene="ebgR"
                     /locus_tag="JQ356_002942"
     CDS             6512..7495
                     /gene="ebgR"
                     /locus_tag="JQ356_002942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator EbgR"
                     /protein_id="HAY4622967.1"
                     /translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK
                     LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTN
                     CYEHSGLPDIKNVTGILIVGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLAR
                     ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS
                     SSGYELAKQMLAQEDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR
                     FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR"
     gene            7679..10771
                     /gene="ebgA"
                     /locus_tag="JQ356_002943"
     CDS             7679..10771
                     /gene="ebgA"
                     /locus_tag="JQ356_002943"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit alpha"
                     /protein_id="HAY4622968.1"
                     /translation="MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPL
                     SGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVP
                     FVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF
                     DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRT
                     DFDEAYCDATLSCEVVLGNLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASF
                     AFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYV
                     MLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGL
                     FVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNES
                     GYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPR
                     IICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGD
                     YGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTT
                     LDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSR
                     TRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKM
                     SGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQ
                     SDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFT
                     MGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRW
                     TALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLG
                     SNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ
                     "
     gene            10768..11217
                     /locus_tag="JQ356_002944"
     CDS             10768..11217
                     /locus_tag="JQ356_002944"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit beta"
                     /protein_id="HAY4622969.1"
                     /translation="MRIIDNLEQFRQIYASSKKWQRCVEAIENIDNIQPGVAHSIGDS
                     LTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK
                     GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
     gene            11280..>12602
                     /locus_tag="JQ356_002945"
     CDS             11280..>12602
                     /locus_tag="JQ356_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY4622970.1"
                     /translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF
                     LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS
                     LLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLM
                     LLLTLSYILLAGTALVGGVQPADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY
                     VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY
                     FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA
                     RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD
                     HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVG"
BASE COUNT         3015 a         3407 c         3170 g         3010 t
ORIGIN      
        1 tcggtggcgt tttttatcgc ccacgcacta ccagcgcctg gtccagctcg cgatacgctt
       61 caaccagttt ctctagtgaa acgcgactta aaccgctggg atttggcagc acccaaatct
      121 gcgtcgaacc aatggtgagc gtttgtttcc cccactgtgc accgcgctgg ctgaatccct
      181 gttcatatgc ttgtttgccc agaatcgcca acgcctgcgg ctgataatct tcaatttttt
      241 caatcagctt acgcccacct gcgtgcagct cctgctttga aacttcattg gcttgcaccg
      301 ttggacggtc taccagtttg gtgacgccac aacgataatc cagcagatgc tgtgcctcct
      361 gcggcttcaa ctgacggtcg gtaaacccgg cctgatatat caccttccag aagcgatttg
      421 ctggatgagc aaagggaaaa ccagtcccgg cggatgaaag cccagggttg ataccgcaaa
      481 acacgacccg taaccctgga gccaaaatat cctcaaccat atttactcct ttctaacatc
      541 accaggaaaa gtataacgga ttgaaaatac attgtttata aaaacagcag gcgcacggta
      601 atggctggat tgcgacacgg agttacttta taatccgcta ccatggcccc ttagctcagt
      661 ggttagagca ggcgactcat aatcgcttgg tcgctggttc aagtccagca ggggccacca
      721 gatatagcaa aggctgacga gaaatcgtca gcctttttct ttttatatct cagttacttt
      781 gcgtgccagt aagccgctgc acgtacccgc tgtgggtcat actgttccgc ttcaaagcgg
      841 cggcttaaat tcttaacgac tttaccttcg ccggttatcc agatgaagta atcatcggca
      901 gggatttgca tctgcgccag acgcgcatct accgcctgct catcatgtgc cagccattcg
      961 atattaaaac catcaaggtg cgcgagataa tcctgacagg cgttatcccg cacgctaacc
     1021 agcgcactaa cttgcggttt aacggcaagt ttgctcaacg tttccaggcg gcggcgcagt
     1081 gcgggcattc cggattcatc gcagacatac agctgatacg cgtaatcttc cggcaccacc
     1141 agcgaaccgc gcggaccagc caccgtaagt ttatcgcccg gttgcgcctg catcgcccag
     1201 ccgctggcga ccccaccgtc gtgaataaag aaatcgatcg ccagttcatg gcgtagttcg
     1261 tcatacagcg gcgtatagtc acgcgacggt gggcgtggtc cttccggcca gacgatgccc
     1321 tcttccgtta ccgttggcgg cacaaagtga gcgtcaggtt gaggaaagaa gagtttgctg
     1381 tgatcgtcaa agccgcgcga tgtaaaaccg tccagcgcct cgccgccgag gacaatgcgc
     1441 tgaaaaccgg cgctgatgcg ctcaacgcgt aacacagtca gttcacggaa gcgcagatca
     1501 ttgcgaacgc gctgcgggta gcggggggag ttattcattg ttatcgcctt cgtgatggta
     1561 atcagatata tctaaataat tttcgtaaat gataatgatt gttaatcatg ataaatgcaa
     1621 gcgattagta gaactgatat gtctatagtc tgataagacg aaccgcctct tctcaggcat
     1681 cattactcaa cgccggatgc ggcgtgaacg ccttatccgg cctacgtgtg agatgagtcc
     1741 acatttaaaa atcattttta ttcttgcaag agtgctcata tcagatataa attagatata
     1801 tctaatcaag aaaaaggagg ctgatatgag ccatcatcac gaagggtgtt gtaaacatga
     1861 aggccagcca cgccatgagg gctgctgcaa aggtgagaag tcagaacacg agcactgcgg
     1921 acacggtcac cagcatgaac acggtcaatg ctgcggtggt cgccacggtc gcggcggcgg
     1981 tcgtcggcaa cgtttctttg gtcacggtga attgcgtctg gtgattctgg atattctctc
     2041 gcgcgatgac agccacggtt acgaattgat taaagcgatt gagaatctaa cccaggggaa
     2101 ttacacccca agcccgggcg tcatctaccc aacgctggat tttctgcagg agcagtcgct
     2161 gattaccatc cgcgaagagg aaggtggtaa gaagcagatt gcgctgaccg aacaaggcgc
     2221 gcagtggctg gaagaaaacc gcgaacaggt ggagatgatt gaagaacgca tcaaagcgcg
     2281 ttgcgttggc gcggcgctgc gccagaaccc gcaaatgaag cgggcgctgg ataattttaa
     2341 agcggtgctg gatttacgcg tcaaccagag cgatatcagt gatgcacaaa taaaaaagat
     2401 cattgcggtg atcgaccgcg ccgcttttga tattacgcaa ctggattaat cgccgcatcc
     2461 gccagtggcg cggtgcaatt gccggatgcg acgcttgacg cgccttatcc ggcctacacc
     2521 cactacacac cccgcaggcc tgataagatg cgccagcatc gcatcaggca ttgtgctcca
     2581 accgccggat ccggcatacc gattaatgca gcaccgtcac cgcgtcttcc agtcggctgg
     2641 cgcggtgttt caccatcgcc gacacctgcg cactctcttc caccagctca gcatttttct
     2701 gggtgatcag gttaagctca tccactgcac gggtcaggct ggaaagccca tcggcctgtt
     2761 ccagcgttga atggctaatc tgggcgatca actgggtgac gtttttcacc tgtgccacaa
     2821 tatcttccat cgtccgtccg gcggcgtgta cctgctgcga accggattgc accttatcag
     2881 cactgacatc aatcagcttg cgaatatcgt tggcagcatt agcgctgcgg ctggctaaat
     2941 gacgcacttc ccctgccacc actgcaaaac ctttgccctg ttcgccggca cgcgccgctt
     3001 ccaccgccgc attcagggcc agaatattgg tctgaaacgc aatatcgtta atcagcgaag
     3061 taatggtgcc aatgcgctgg gtactgtcgg cgatatcgtc cattgtcttg atcaccgtgg
     3121 tcatcgcctc cccaccctgc actgccgcat tactggcgat gatagaaagt ttatcggcag
     3181 ccgacgccgt ggcagagttc tgtttcaccg acgccgccat ttggttcatg gtcgccaccg
     3241 tttgctgaac gttatcaact gtctgctggg tatgttcgtt cagttcatcg gtgcctttcg
     3301 ccagcgtctc actgccattt ctgacactgg acacctggct tgagacatcg ttaattagcc
     3361 aacggcacat caggccaagc tgccctaccg cgcgtaatgt cagccccagc tcatcgctgc
     3421 gattcaggtg ctcaacacta ttacgctctc cggtcgccac cttcagtgcc tgacgggcga
     3481 cattttctat cgggcgcaca atctgccatt caaaacaagc gcttgccaac aataccacta
     3541 acacacagag gaaatacgtc accaccgggg cagcaacaaa ccaaagcatg gccgccagca
     3601 agataaacat cagggtcatc actccacgcg cccgccagcg aagcggtaat gaaggcagtt
     3661 tacccagcca gcctttacgc accaccaggc ctttatgaat acgcttactg gtacgtccgg
     3721 cgttcagcgc tttgtacagc ggctccaccg ccgcaatctc ttcatccgtc gcccgggtac
     3781 gaatcgacat atagccactg atttttccct cgcgcaccat cggtaccgca ttggcccgca
     3841 cccaataatg gtcgccattt ttgcggcgat ttttcacgat gccgctccag ggctcccctt
     3901 ttttcagggt gaaccacata tccgcaaacg ccgcttttgg catatccggg tgacgcacca
     3961 tgttgtgcgg ctgcccttgt aactcttgca aggtaaagcc gctcacctgc acaaaagtgt
     4021 cattagcatg agtgatatag ctttgcagat cggtagtgga catcagagtg gtatcgtccg
     4081 ccagcggggt attttgctgg gtgacatacg gatgagaaga catgttcgcg tcctatgcag
     4141 gttatatggt tgttaacttc ttgtcagagt ttatgtcggc cccgctgcgg ttatctttaa
     4201 ccgattaatt tgatttagat cgcaatttgc gattaaagca caaatctaat tccttgattt
     4261 aaaatacttt cactctgtta ctatacgaaa acgttaatta tcttgcccaa aatcaggcaa
     4321 ttatcgccct gaaaacgtgc atttgcacag caatcatcaa atccataccc gacaaaaacc
     4381 gtgcaaaata acaacgaatg ttaacaaata gcattaaata ctgcgcaaat gataaccaca
     4441 tttgtgttta tcccgatttt cgcgatcgca gccggagtgg cgcaatccct gcaatactta
     4501 aatcggtatc atgtgatacg cgagcctccg gagcatattt tgaacaggtt accttcgagc
     4561 gcatcggctt tagcgtgcag cgcccacgcc ctgaatctca ttgagaagcg aacgctggat
     4621 catgaggaga tgaaagcact taaccgagag gtgattgaat acttcaaaga gcatgtcaat
     4681 ccggggtttt tagagtatcg caaatctgtt accgccggcg gggattacgg agccgtagag
     4741 tggcaagcgg gaagtttaaa tacgcttgtc gacacccagg gacaggagtt tatcgactgc
     4801 ctgggaggtt ttggaatttt caacgtgggg caccgtaatc cagttgtggt ttccgccgta
     4861 cagaatcaac ttgcgaaaca accgctgcac agccaggagc tgctcgatcc gttacgggcg
     4921 atgttggcga aaacccttgc tgcgctaacg cccggtaaac tgaaatacag cttcttctgt
     4981 aatagcggca ccgagtccgt tgaagcagcg ctgaagctgg cgaaagctta ccagtcaccg
     5041 cgcggcaagt ttacttttat tgccaccagc ggcgcgttcc acggtaaatc acttggcgcg
     5101 ctgtcggcca cggcgaaatc gaccttccgc aaaccgttta tgccgttact gccgggcttc
     5161 cgtcatgtgc cgtttggcaa tatcgaagcc atgcgcacgg ctcttaacga gtgcaaaaaa
     5221 accggtgatg atgtggctgc ggtgatcctc gaaccgattc agggtgaagg tggcgtaatt
     5281 ctgccgccgc cgggctatct caccgccgta cgtaagctat gcgatgagtt cggcgcactg
     5341 atgatcctcg atgaagtaca aacgggcatg gggcgcacgg gcaagatgtt cgcctgcgag
     5401 catgagaacg tacagccgga tatcctctgc cttgccaaag cgctcggcgg cggcgtgatg
     5461 ccgattggcg cgaccatcgc cactgaagag gtgttttcag ttctgttcga caacccattc
     5521 ctgcatacca ccacctttgg cggcaacccg ctggcctgtg cggcggcgct ggcgaccatc
     5581 aatgtgttgc tggagcagaa cttactggct caggctgagc aaaaaggcga tatgttgctg
     5641 gacggtttcc gtcaactggc gcgggaatat cccgatctgg tacaggaagc gcgtggtaaa
     5701 gggatgttga tggcaattga gtttgttgat aacgaaatcg gctataactt tgccagcgag
     5761 atgttccgcc agcgcgtact ggtggccgga acgctcaata acgccaaaac gatccgcatt
     5821 gaaccgccac tgacactgac cattgaacag tgtgaactgg tgatcaaagc ggcgcgtaag
     5881 gcgctggcgg ccatgcgagt aagtgtcgaa gaagcgtaat atcaaatcgg atggcgatac
     5941 gacgtcgcca tccgatcttt ttatacgacg cgtacgcccg caggcatcat ccgctccggc
     6001 gttaacaaca cgctttcact gccgtcatcg gtttccgcac acaacagcat gcattccgac
     6061 gtttcaccac gcattttcgc tttttgcaga ttgcataaga ccaccaccgt tttccccatc
     6121 agctcttctt cgctgtagta cggcaccagg ctggtcacgg tttgcagtgt tttttccccc
     6181 acatcaacct gtacgatgta cagcttgtcg gcgttttcat ggcgtttcac ttccacaatc
     6241 tttccgacgc gcatttccag acgtgcaaaa tcagcgtaag ccacggtttc cattgtttcc
     6301 ttccttcggg taaaatttta ctaaactata gcaaaagttt ttctcaatcc tgtaggctaa
     6361 aaatggagaa tgcaggcgtg atcacattcg tgagccgctg tgttaccgtt acagcgtcaa
     6421 agaaacgcgc tttatttact gaaaacaggt gacccgataa gtacttcctc tacaatgggg
     6481 gcgcacatca gggaaagtaa aaaaggtaaa catggcaaca ctaaaagaca tcgcaatcga
     6541 agctggcgta tccctggcga cagtatccag ggtcttaaat gacgatccga cattgaatgt
     6601 gaaagaagag acgaaacatc gcattctcga gatcgccgaa aagctggagt acaagaccag
     6661 tagtgcccgc aaactccaga caggtgcagt caaccaacac catattctgg ctatctacag
     6721 ctaccaacag gagctggaga tcaacgatcc ttactatctg gcgatccgcc acggcattga
     6781 aactcagtgc gaaaagctgg gcattgagct caccaactgt tatgaacaca gcggattacc
     6841 agacattaaa aacgtcaccg gtattttaat tgtcggcaaa cccacgcccg cccttcgcgc
     6901 cgccgcctgt gcgttgaccg acaatatctg ttttatcgac tttcacgaac ccggcagcgg
     6961 ttacgatgcg gtggatatcg atctggcacg catcagtaaa gaaatcatcg acttctatat
     7021 caatcagggc gttaatcgta ttggttttat tggcggtgaa gatgagccag gcaaagcgga
     7081 tattcgtgag gtcgcctttg cggaatatgg ccgactgaaa caagtggtac gcgaagagga
     7141 tatctggcgc ggaggctttt ccagttcgtc gggttatgaa ctggcaaaac agatgctggc
     7201 gcaggaagac tatccgaagg cactgtttgt tgcttccgat tccattgcta tcggcgtact
     7261 gcgggcaatt catgaacgag gcctgaacat cccacaggat atttcgctta tcagcgttaa
     7321 cgatatcccc accgcgcgat ttacctttcc gccgctctcc accgtgcgca tccattccga
     7381 gatgatggga agtcagggcg ttaacctggt gtatgaaaaa gcccgcgatg gtcgcgcgct
     7441 gccgctgtta gtcttcgttc ccagcaaatt aaaactgcgc ggcacgaccc gttaaatccc
     7501 cttacacact gtccggcaat cgtttttgcc ggacagtgct gccgtttatt ttcgtgatcc
     7561 agttaaagta aatgcattta tctgctactt tttagtaaaa attttactaa actccccagc
     7621 aattacacaa actaccatca ccatgaatgg ttccgatttc tctctaccgg gaggccctat
     7681 gaatcgctgg gaaaacattc agctcaccca cgaaaaccga cttgcgccgc gtgcgtactt
     7741 tttttcatat gattctgttg cgcaagcgcg tacctttgcc cgcgaaacca gcagcctgtt
     7801 tctgccctta agcggtcagt ggaatttcca cttttttgac catccgctgc aagtaccaga
     7861 agccttcacc tctgagttaa tggctgactg ggggcatatt accgtccccg ccatgtggca
     7921 aatggaaggt cacggcaaac tgcaatatac cgacgaaggt tttccgttcc ccatcgatgt
     7981 gccgtttgtc cccagcgata acccaaccgg tgcctatcaa cgtattttca ccctcagcga
     8041 cggctggcag ggtaaacaga cgctgattaa atttgacggc gtcgaaacct attttgaagt
     8101 ctatgttaac ggtcagtatg tgggtttcag caagggcagt cgcctgaccg cagagtttga
     8161 catcagcgcg atggttaaaa ccggcgacaa cctgttgtgt gtgcgcgtga tgcagtgggc
     8221 ggactctacc tacgtggaag accaggatat gtggtggtca gcggggatct tccgcgatgt
     8281 ttatctggtc ggaaaacacc taacgcatat taacgatttc actgtgcgta ccgactttga
     8341 cgaagcctat tgcgatgcca cgctttcctg cgaagtggtg ctgggaaatc tcgccgcctc
     8401 ccctgtcgtc acgacgctgg aatataccct gtttgatggc gaacgcgtgg tgcacagcag
     8461 cgccattgat catttggcaa ttgaaaaact gaccagcgcc agctttgctt ttactgtcga
     8521 acagccgcag caatggtcag cagaatcccc ttatctttac catctggtca tgacgctgaa
     8581 agacgccaac ggcaacgttc tggaagtggt gccacaacgc gttggcttcc gtgatatcaa
     8641 agtgcgcgac ggtctgttct ggatcaataa ccgttatgtg atgctgcacg gcgtcaaccg
     8701 tcacgacaac gatcatcgca aaggccgcgc cgttggaatg gatcgcgtcg agaaagatct
     8761 ccagttgatg aagcagcaca atatcaactc cgtgcgtacc gctcactacc cgaacgatcc
     8821 gcgtttttac gaactgtgtg atatctacgg cctgtttgtg atggcggaaa ccgacgtcga
     8881 atcgcacggc tttgctaatg tcggcgatat cagccgtatt accgacgatc cgcagtggga
     8941 aaaagtctac gtcgagcgca ttgttcgcca tatccacgcg cagaaaaacc atccgtcgat
     9001 catcatctgg tcgctgggca atgaatccgg ctatggctgt aacatccgcg cgatgtacca
     9061 tgcggcgaaa gcgctggatg acacgcgact ggtgcattac gaagaagatc gcgatgctga
     9121 agtggtcgat attatttcca ccatgtacac ccgcgtgccg ctgatgaatg agtttggtga
     9181 atacccgcat ccgaagccgc gcatcatctg tgaatatgct catgcgatgg ggaacggacc
     9241 gggcgggctg acggagtacc agaacgtctt ctataagcac gattgcattc agggtcatta
     9301 tgtctgggag tggtgcgacc acgggatcca ggcacaggac gaccacggca atgtctggta
     9361 taaattcggc ggcgactacg gcgactatcc caacaactat aacttctgtc ttgatggttt
     9421 gatctattcc gatcagacgc cgggaccggg cctgaaagag tacaaacagg ttatcgcgcc
     9481 ggtaaaaatc cacgcgcggg atctgactcg cggcgagttg aaagtcgaaa ataaactgtg
     9541 gtttaccacg cttgatgact acaccctgca cgcagaggtg cgcgccgaag gtgaaacgct
     9601 cgcgacgcag cagattaaac tgcgcgacgt tgcgccgaac agcgaagccc ccttgcagat
     9661 cacgctgccg cagctggacg cccgcgaagc gttcctcaac attacggtga ccaaagattc
     9721 ccgcacccgc tacagcgaag ccgggcattc tatcgccact tatcagttcc cgctgaagga
     9781 aaacaccgcg cagccagtgc ctttcgcacc aaataatgcg cgtccgctga cgctggaaga
     9841 cgatcgtttg agctgcaccg ttcgcggcta caacttcgcg atcaccttct caaaaatgag
     9901 tggcaaaccg acatcctggc aggtaaatgg cgagtcgctg ctgacccgcg agccaaagat
     9961 caacttcttc aagccgatga tcgacaacca caagcaggag tacgaagggt tgtggcagcc
    10021 gaatcatttg cagatcatgc aggaacatct gcgcgacttt gccgtagaac agagcgatgg
    10081 tgaagtgttg atcatcagcc gcacagttat tgcaccgccg gtgtttgact tcgggatgcg
    10141 ctgtacctac atctggcgca tcgctgccga tggccaggtt aacgtggcgc tttccggcga
    10201 gcgttacggc gactatccgc acatcattcc gtgcatcggt ttcaccatgg ggattaacgg
    10261 cgaatacgat caggtggcgt attacggtcg tggaccgggc gaaaactacg ccgacagcca
    10321 gcaggctaac atcatcgata tctggcgcag caccgtcgat gccatgttcg agaactatcc
    10381 cttcccgcag aacaacggca accgtcagca tgtccgctgg acggcactga ctaaccgcca
    10441 cggcaacggt ctgctggtgg ttccgcagcg cccaattaac ttcagcgcct ggcactatac
    10501 ccaggaaaac atccacgctg cccagcactg taacgagctg cagcgcagtg atgacatcac
    10561 cctgaacctc gaccaccagc tacttggcct cggctccaac tcctggggca gcgaggtgct
    10621 ggactcctgg cgcgtctggt tccgtgactt cagctacggc tttacgttgc tgccggtttc
    10681 tggcggagaa gctaccgcgc aaagtctggc gtcgtatgag ttcggcgcag ggttcttttc
    10741 cacgaatttg cacagcgaga ataagcaatg aggatcatcg ataacttaga acagttccgc
    10801 cagatttacg cctctagcaa gaagtggcaa cgctgcgttg aagcgattga aaatatcgac
    10861 aacattcagc ctggcgtcgc ccactccatc ggtgactcat tgacttaccg cgtggagaca
    10921 gactccgcga ccgatgcgct atttaccggg catcgacgct attttgaagt gcattactac
    10981 ctgcaagggc agcaaaaaat tgaatatgcg ccgaaagaga cattacaggt agtggaatat
    11041 tatcgtgatg aaactgaccg tgaatattta aaaggctgcg gagaaaccgt tgaggtccac
    11101 gaagggcaaa tcgttatttg cgatatccat gaagcgtatc ggtttatctg caataacgcg
    11161 gtcaaaaaag tggttctcaa agtcaccatc gaagatggtt atttccataa caaataacaa
    11221 ctacggcggc aaaaggagtt tgccgccacc gctaccctac acattttcgg agatgtgtta
    11281 tgtctgatac caaacgtaat acaatcggca aattcggctt gctctcgctg acttttgctg
    11341 ccgtttacag ctttaacaac gttatcaata ataatattga gcttggactg gcctcggcac
    11401 cgatgttttt cctcgcgacg attttttatt ttattccctt ctgtctgatc atcgcagaat
    11461 ttgtttcgtt aaataaaaac tcagaagccg gtgtctacgc gtgggtaaaa agttcgctgg
    11521 gcggacgttg ggcatttatt actgcctata cctactggtt cgtaaacctg ttctttttca
    11581 cctcactgtt gccgcgcgtt attgcttatg cttcgtatgc cttcctcgga tacgaatata
    11641 ttatgacgcc ggttgccacc accattatca gtatggtgct gttcgccttc tccacctggg
    11701 tttccaccaa cggggcgaaa atgttggggc caattacctc cgtcacttca acgctgatgc
    11761 tgctgttaac gctctcctac attttactgg caggtacggc gctggttggc ggcgtacagc
    11821 ctgctgaccc catcaccgtt gacgcgatga tcccgaactt caactgggcg ttcctcggcg
    11881 ttaccacctg gatctttatg gccgcaggtg gcgcggagtc cgtcgctgtg tacgttaacg
    11941 acgtcaaagg cggttcgaaa tcgttcgtta aagtgatcat cctcgccggg atttttatcg
    12001 gcgtactgta ttccgtctcc tcggtgctga ttaacgtctt cgtcagcagc aaagagttga
    12061 aatttaccgg cggatcggtg caggtattcc atggcatggc ggcgtatttt ggtctaccgg
    12121 aagcgttgat gaatcgcttt gtcggtctgg tgtcctttac cgcgatgttc ggttccctgc
    12181 tgatgtggac cgcaacgccg gtgaaaattt tcttctccga aatcccggaa ggcatctttg
    12241 gtaagaaaac cgtcgaactg aacgaaaacg gcgttccggc gcgcgcagcg tggatccagt
    12301 tcctgatcgt catcccgctg atgattatcc cgatgctcgg ttccaatacc gtgcaggatc
    12361 tgatgaatac aattattaat atgaccgccg cagcgtccat gcttccgccg ttattcatca
    12421 tgctggctta cctgaattta cgcgccaaat tagatcacct gccacgcgat ttccgtatgg
    12481 gctcccgccg caccggtatt atcgttgttt caatgctgat tgcgatattt gccgtagggt
    12541 ttgtcgcttc gacattcccg actggcgcga atattctgac catcattttt tataacgtcg
    12601 gc
//
LOCUS       DADKRT010000125        12582 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.126, whole genome shotgun sequence.
ACCESSION   DADKRT010000125 DADKRT010000000
VERSION     DADKRT010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12582
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.126"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            223..1320
                     /gene="mltA"
                     /locus_tag="JQ356_002946"
     CDS             223..1320
                     /gene="mltA"
                     /locus_tag="JQ356_002946"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HAY4622971.1"
                     /translation="MKGRWVKYLLMGTVVAMLAACSSKSTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
                     DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
                     LGDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
                     GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
                     SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
     gene            1397..2203
                     /gene="tcdA"
                     /locus_tag="JQ356_002947"
     CDS             1397..2203
                     /gene="tcdA"
                     /locus_tag="JQ356_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HAY4622972.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
                     AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
                     TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
                     PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSIGKLGVDCVFSTEALVYPQSDGT
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
     gene            complement(2254..2697)
                     /gene="csdE"
                     /locus_tag="JQ356_002948"
     CDS             complement(2254..2697)
                     /gene="csdE"
                     /locus_tag="JQ356_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HAY4622973.1"
                     /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQL
                     PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVLGLLAVLLTAVEGK
                     TAAELQAQSPLALFDELGLRGQLSASRSQGLNALSEAIIAAAKQV"
     gene            complement(2697..3902)
                     /gene="csdA"
                     /locus_tag="JQ356_002949"
     CDS             complement(2697..3902)
                     /gene="csdA"
                     /locus_tag="JQ356_002949"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HAY4622974.1"
                     /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
                     LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
                     RPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
                     SRILALSQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
                     SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLADYDINQAENWSHSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA
                     GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
                     DRALELLVD"
     gene            4094..4321
                     /locus_tag="JQ356_002950"
     CDS             4094..4321
                     /locus_tag="JQ356_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417289.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HAY4622975.1"
                     /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
     gene            4672..5589
                     /locus_tag="JQ356_002951"
     CDS             4672..5589
                     /locus_tag="JQ356_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HAY4622976.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
                     SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAGFRQWILAKAAAEQEKFRFRYEQ"
     gene            5608..6003
                     /locus_tag="JQ356_002952"
     CDS             5608..6003
                     /locus_tag="JQ356_002952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HAY4622977.1"
                     /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
                     EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
                     PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
     gene            5996..7096
                     /gene="rlmM"
                     /locus_tag="JQ356_002953"
     CDS             5996..7096
                     /gene="rlmM"
                     /locus_tag="JQ356_002953"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HAY4622978.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENSGYVIY
                     ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
                     GYSYSNNNSPFYMGIPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
                     DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
                     QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
     gene            complement(7140..7871)
                     /gene="fucR"
                     /locus_tag="JQ356_002954"
     CDS             complement(7140..7871)
                     /gene="fucR"
                     /locus_tag="JQ356_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
                     /protein_id="HAY4622979.1"
                     /translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
                     QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
                     STCWYLARQLPDINIQVFTNSHPICYELGKRERIQLISSGGTLERKYGCYVNPSLISQ
                     LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
                     RIGHLDEVTHIISDERQVATSLVTA"
     gene            complement(7929..8351)
                     /gene="fucU"
                     /locus_tag="JQ356_002955"
     CDS             complement(7929..8351)
                     /gene="fucU"
                     /locus_tag="JQ356_002955"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HAY4622980.1"
                     /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR
                     ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
                     IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
     gene            complement(8353..9771)
                     /gene="fucK"
                     /locus_tag="JQ356_002956"
     CDS             complement(8353..9771)
                     /gene="fucK"
                     /locus_tag="JQ356_002956"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417283.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HAY4622981.1"
                     /translation="MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENN
                     TWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISW
                     KCPRTAAVMDNIEQLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERTHAWFFI
                     SSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIG
                     TLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILIVRSAQVDT
                     SLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAP
                     SADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKA
                     SELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEAR
                     AQIHYQYRYFYPQTEPEFIEEV"
     gene            complement(9768..11513)
                     /gene="fucI"
                     /locus_tag="JQ356_002957"
     CDS             complement(9768..11513)
                     /gene="fucI"
                     /locus_tag="JQ356_002957"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HAY4622982.1"
                     /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
                     LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
                     RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
                     RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
                     QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
                     NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
                     ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
                     SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF
                     LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
                     TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
                     WAAHGMDIEVLQERL"
     gene            complement(11546..>12582)
                     /gene="fucP"
                     /locus_tag="JQ356_002958"
     CDS             complement(11546..>12582)
                     /gene="fucP"
                     /locus_tag="JQ356_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HAY4622983.1"
                     /translation="ITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAA
                     NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQ
                     LSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRL
                     ARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGR
                     FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFS
                     LGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF
                     ARFRSQTATN"
BASE COUNT         3013 a         3147 c         3331 g         3091 t
ORIGIN      
        1 tgctccaccc cgcgtccgtg gatgcgcact atactccgct cgcgttttca tgcaaccttt
       61 tttttacccc gatcacggat ttagcatgat tttgaacaaa aacaaaccac taaagcctat
      121 tttttgtgca aaatttgcgt cagggagagg ctgctcattt cattaaacgc ggcggtttgt
      181 tatcttcgtt gcgccttatt ttttaacctg aagaagagaa caatgaaagg acgttgggta
      241 aagtaccttc ttatgggcac ggttgtggca atgcttgccg cctgctcttc caaatcaacc
      301 gatcgcggac agcaatataa agacgggaaa tttacccagc ctttctctct ggtgaaccag
      361 ccagatgccg ttggcgcgcc gattaacgcc ggtgattttg ccgagcaaat taaccatatc
      421 cgtaattcgt caccgcgtct gtatggcaac cagagtaatg tttataacgc ggtgcaagag
      481 tggctgcgcg caggcggtga tacccgcaat atgcgccagt tcggcattga tgcctggcag
      541 atggaaggtg ccgacaacta tggtaacgtg cagtttacag gctattacac gccggtaatt
      601 caggcgcgcc atacccgcca gggcgagttc cagtatccta tttaccgtat gccgccaaaa
      661 cgtggtcgtc tgccgtctcg tgcggagatc tacgcggggg cattgggcga taaatacatc
      721 ctcgcttaca gcaactctct gatggataac ttcattatgg atgtgcaggg tagtgggtat
      781 atcgactttg gtgatggcag tccgcttaac tttttcagct atgcagggaa aaacggtcat
      841 gcctatcgca gcattggtaa ggtgctgatc gaccgtggcg aagtgaaaaa agaagatatg
      901 tcgatgcagg cgattcgtca ttggggcgaa acacacagtg aagccgaggt tcgcgagctg
      961 ctggaacaga acccgtcttt cgtcttcttt aaaccgcaat cttttgcacc ggtgaaaggg
     1021 gcaagtgcgg tgccgctggt tggccgtgct tctgttgcct ccgatcgttc aattattccg
     1081 ccaggtacta ccttgctggc agaagtgccg ctgctggata ataacggcaa atttaacggt
     1141 cagtacgaat tgcgtctgat ggtggcgctg gatgtcggtg gcgcaatcaa aggccaacac
     1201 ttcgatatct atcaagggat cgggccggaa gccggacatc gcgcaggttg gtacaaccac
     1261 tatggacgtg tctgggtgct gaaaaccgcc ccgggcgcag gtaacgtctt tagcggctga
     1321 tgtgttattc tgtataccgt ttttacggat acgacagggt gagggataac ctcacccttt
     1381 ttaattctga ggtgctatgt ctgtggtaat tagtgatgca tggcgtcagc gttttggtgg
     1441 cacagcgcgt ctgtatggtg aaaaagcgtt gcaactgttt gctgacgcgc atatttgtgt
     1501 ggttggtatc ggtggtgtcg gttcctgggc ggcggaagcg ctggcgcgca cggggattgg
     1561 cgcaatcacg cttatcgata tggatgatgt gtgcgtcacc aataccaatc ggcaaattca
     1621 cgctctgcgc gataacgtcg ggctggcaaa agcggaagtc atggcggagc gcattcgcca
     1681 gattaacccg gagtgccgtg taacggtggt ggatgatttc gtgacgccgg ataacgtagc
     1741 gcaatatatg agtgccggtt attcgtacgt gattgatgcc attgatagtg tacgacccaa
     1801 agcggcgctg attgcttatt gtcggcgcaa taaaatcccg ctggtcacga ccggtggcgc
     1861 gggtgggcag attgacccga cgcagattca ggttaccgat ctggcgaaaa cgattcagga
     1921 cccgctggcg gcgaagttgc gcgagcgcct gaaaagcgat tttggcgtag tgaaaaacag
     1981 tataggtaag ctcggcgtgg attgcgtgtt ttctactgaa gcgctggtgt acccgcagtc
     2041 agacggtacg gtgtgtgcga tgaaagccac ggcagaaggg ccgaagcgga tggattgtgc
     2101 atctggattt ggcgcggcaa cgatggtgac cgccaccttt gggtttgttg cggtttctca
     2161 tgcgctgaag aagatgatgg cgaaagcagc gcgtcagggt taaacaatca ggtcggatgc
     2221 gacgcgaacg tcttatccga cctggttctg tgcttaaacc tgcttcgccg cagcgataat
     2281 tgcctcgctt aacgcattca acccctggct gcgtgaggcg ctaagctgcc cacgcaatcc
     2341 cagctcatca aacaatgcca gcggcgactg tgcctgtaat tcggcggcgg ttttcccctc
     2401 aacggcagtc aacaacaccg ccaacaggcc gagcacaatg cgcccttcgc tgtcgccaaa
     2461 gaagtgcatt ttaccgtttt cagccacggt atatcccagc cagacgcggt tttcgcatcc
     2521 ggcaatctct ttagcctgcg cttttaactc gtctggcaaa gccggaagct gtttccccag
     2581 catgatcaac tggcgatatt tatcttccca ttgcgtcaac ggtgcgaagg tattgcgtaa
     2641 cgtttctgcg gttacggttg tgccgaacgg atgtccggcg aattgcgggt ttgtcattaa
     2701 tccaccaata attccagcgc gcggtcaacg gcattcacca gcgcatccac atcactcttt
     2761 gtattatatg gcgcaaaaga ggcgcgcagt gtgccggtta cgcctaattc tgccagtagc
     2821 ggctgagcac aatgttgccc ggcccgcaag gcaataccgt actccgccag tagcgtcacc
     2881 atatcgctgt gatgaacgcc agcaaaatca aaggccagca ggctggaatc ctggcagcgg
     2941 aatgaacgaa agcctggacg tttcgccagc gcatcttccg ccagcgttgc taagctatgg
     3001 ctccagtttt cggcctggtt gatatcgtaa tctgccagcc attccagcgc cgcgcttaat
     3061 cctatgacac cagccacatt tggcgttcct gcttccagtt tccacggcgc agattgagtc
     3121 gtgaagccgt caaaactcac ttcgtgaatc attttgccgc cacccagcca gggcgacatc
     3181 gcttccagca gttctgattt gccatacagc acgccgatac ccgtcgggcc atacagtttg
     3241 tgaccagaga aagcatagaa atcgatatcc agttgctgaa catccgcggg gaaatgcacc
     3301 gccccctgag caccatcaac catcaccacc atccctgctg aatgagcaaa ggtaatcgct
     3361 cgcgccagat ccgggcaacc gccagtaacg ttcgacatct gactcaacgc cagaatccga
     3421 ctacggggag taatcagttc tggcaacaaa tcgacatccg gcagtcgctg cgcattaagc
     3481 ggcaatttca ccactttggc tccagtttgt tgggcgacca tcagccaggg gacgaggttg
     3541 gcgtggtgtt ctgccacgct gacaataatc tcatcgcccg gttgcagacg cggacgcgca
     3601 tagcattgtg ccaccatgtt gatggattca gtggtgccgc gcgtccagac gatagtttta
     3661 tcatccggtg cattcagtaa ttgcgccact ttctctcgtg cagcttcata acgcgcggtc
     3721 aggcgttggg cttcggcaaa ctggctgcga tggacgtttc cggcgctcag gctgtaaaac
     3781 tgtcgagtgg cttcaaccac ggcttcaggt ttaagcgcgg tcgcggcgct gtcgagatag
     3841 acgcccgcat cctgtagtgc gggaaactgg gcgcgaaact gcgcgggatt aaaaacgttc
     3901 atggtactcc tcggcttgat gcaccgatcg tgacgcaaaa ttcactttga tacaaggaga
     3961 gtgctaacca tcagaattat ctggatatcc tggcgaagcc gcgtaagtaa catatgctga
     4021 atagtgttag gcgttaattt tagcctgtta atcaatacta ttaagattta ttaatcgctt
     4081 taaggagaag atgatgaaaa agactgccgc aattatttct gcctgtatgc tgacttttgc
     4141 cctgagcgcc tgttccggtt cgaactatgt gatgcacacc aatgacggac gtaccatcgt
     4201 ctctgacggc aaaccacaga ctgataacga taccggtatg atttcgtata aagacgctaa
     4261 tggcaacaaa cagcagatca accgtactga cgtgaaagag atggtcgaac tggatcagta
     4321 attcgcgatc gcaaggtaaa aaaaagcacc gcaattaggc ggtgctacat taatcactat
     4381 ggacagacag ggtaaatgta caggaagtga aaaaaggtag ctttgctacc atggtctgaa
     4441 tcgcagacca attgcaaaca caacaacaca acatcacaac cgtaagccaa aagttcacca
     4501 gaacacgcat tccgataaaa cttttcgttc cggctcagga agtgccgcca ctataggtat
     4561 ttgctggtag aagctcaacg gacaatttat aatggctcag attaaaaaaa ctaataggtt
     4621 acatagtgtg atctaattgt taaattcatt taacatcaaa gtttaatagc catgtctaaa
     4681 cgattaccac cgctaaatgc cttacgagtt tttgatgccg cagcacgcca tttaagtttc
     4741 actcgcgcag cagaagagct ttttgtgacc caggccgcag taagtcatca aatcaagtct
     4801 cttgaggatt ttttggggct aaaactgttc cgccgccgta atcgttcact cctgctgacc
     4861 gaggaagggc aaagctattt cctcgatatc aaagagatat tttcgcaatt aaccgaagcg
     4921 acgcgtaaac tccaggcccg tagcgccaag ggggcgttga cggtcagttt actccccagt
     4981 ttcgccattc attggttggt tccgcgactt tccagcttta attcagctta tccgggaatt
     5041 gacgttcgaa tccaggcggt tgatcgtcag gaagataagc tggcggatga tgttgatgtg
     5101 gcgatatttt atggtcgggg caactggccg gggctacggg tggaaaaact gtacgccgaa
     5161 tatttattgc cggtgtgttc gccgctactg ctgactggcg aaaaaccctt gaagacaccg
     5221 gaagatctgg ctaaacatac gttattacat gatgcttcgc gccgtgactg gcagacatat
     5281 acccgacagt tggggttaaa tcatatcaac gttcagcaag ggccaatttt tagccatagc
     5341 gccatggtgc tgcaagcggc tatccacggg cagggagtgg cgctggcaaa taacgtgatg
     5401 gcgcaatctg aaatcgaggc cggacgtctt gtttgcccgt ttaatgatgt tctggtcagt
     5461 aaaaacgctt tttatctggt ttgtcatgac agccaggcag aactgggtaa aatagccggc
     5521 tttcgccaat ggatcctggc gaaagccgct gctgaacaag aaaaattccg ctttcgttat
     5581 gaacaataat ttacgtaggg tacgaccatg accagccgtt ttatgctgat tttcgccgcc
     5641 attagcggct tcatttttgt ggctctgggc gcttttggcg cgcatgtgtt aagtaaaacc
     5701 atgggagccg ttgagatggg ctggatccag accggcctcg aataccaggc gtttcatacg
     5761 ctggcgatct taggtctggc ggtggcaatg cagcgtcgca tcagtatctg gttttactgg
     5821 agtagcgttt tcctcgcgtt aggcacggtg ttgttcagcg gcagccttta ttgcctggcg
     5881 ctgtcccatc tgcgtttgtg ggcgtttgtc actccggttg gcggcgtgag cttcctcgcg
     5941 ggctgggcgt taatgttagt tggtgctatc cgtttaaagc gcaagggcgt aagtcatgaa
     6001 taaggttgta ttgctgtgcc gtccgggctt tgaaaaagag tgcgccgcag aaattaccga
     6061 taaagccggc cagcgggaaa ttttcggttt tgcccgcgtg aaagagaatt cgggttatgt
     6121 catttatgaa tgttatcaac ctgatgatgg cgataagtta atccgtgagc tgccgttcag
     6181 ttcattaatt tttgcccgcc agtggtttgt ggtgggggaa ctcctgcagc atttgccgcc
     6241 agaagatcgt attaccccca ttgtcggcat gttacagggc gtagtagaga agggcggtga
     6301 actgcgtgtt gaagttgccg ataccaacga aagcaaagag ttgctgaaat tctgccgtaa
     6361 atttactgtt ccgctacgcg ctgccttgcg cgatgccggg gtgctggcga actatgaaac
     6421 gccgaagcgt ccggttgtgc atgtattctt tattgcacca ggctgctgct ataccggtta
     6481 ctcatacagc aacaataatt cgccgttcta tatgggcatt ccgcgcctga aatttccggc
     6541 agaggcgccg agtcgttcca cgctcaaact ggaagaggca tttcatgtgt ttattcctgc
     6601 ggatgagtgg gatgaacgcc tggcgaacgg gatgtgggcg gtggatttag gcgcttgccc
     6661 tggcggctgg acctaccaac tggtgaagcg caacatgtgg gtttattccg tcgacaacgg
     6721 cccgatggcg caaagtctga tggataccgg gcaggtgacg tggctgcggg aagacggttt
     6781 caaattccgt ccgacacgca gcaatatctc ctggatggta tgcgatatgg ttgaaaaacc
     6841 ggctaaagtt gcggcattga tggcgcagtg gctggttaat ggctggtgcc gtgaaaccat
     6901 tttcaatctc aaactgccga tgaaaaaacg ctacgaagaa gtatcacaca atctggcgta
     6961 tattcaggca cagcttgatg aacatggcat aaatgctcag attcaggcgc ggcagttgta
     7021 tcacgatcgc gaagaagtga cggtgcacgt ccgccgcatc tgggctgcgg tgggtggtcg
     7081 tcgcgacgag cgataacagg caaggccggg gcgtcgtctt cggcctgcta ccctttccgt
     7141 caggctgtta ccaaagaagt tgcaacctgg cgctcatcag aaataatgtg cgttacctca
     7201 tccagatgcc cgatgcgggc ttcccctgaa cgattaaatt tacttttatc aatcaataac
     7261 aacgattgcg cggcacgttt taatagcatc gatttgtaat cagcgttgat cgcattggag
     7321 tcccacagtg cgccgctgct atcgatccct tcacaagaaa aaataaacag atcgatttcc
     7381 agcgatttaa gttgggaaat cagcgaggga ttgacgtaac agccatattt gcgctcaagt
     7441 gtgccgccgg aactgatcag ttgaatgcgt tcgcgtttac cgagttcata gcaaatcgga
     7501 tggctattgg tgaagacctg aatgttgatg tcaggcaact ggcgtgccag ataccagcaa
     7561 gttgaactgg cgtctaaggc tatcaccatc ccttcttcaa tccacgcgag cgcctcgcgc
     7621 gcgatatctg ctttatgcgc ataatggctt ttcagcctga tgtgaaaggg atcgccactg
     7681 tcttgatttt gacggtggat atatttagcg cgtccatgat tgcgcagaat tttaccctgc
     7741 gtctgtaatt cattgagatc gcgacgaatg gtttctttac tgacctttag ctgttcagag
     7801 agagcttccg tggtcaggct ggtatggttc agcagcaggt cgactatcgc ttgctggcgt
     7861 gccgctttca tatttttcac cccatcattc gataaccgcc cgcgtcatgc gggcgtaccg
     7921 gtatgagatt acggtgttac cccttttttt aaaagaatat tcccgtactt cgctcgttcg
     7981 cctgtgataa cgatcgcaaa ggctttttgc gcccgttcat aaaacgcaaa acgattgatg
     8041 cggatgatgt caggacacgg ggcttgtagt gaaagcgcat tacggtaacg tcgttctact
     8101 tcaggatcga gagtgtcacc ttctaccgcc gccatcatca ccagcggcgg tgcataactg
     8161 tccagttcaa ataacgggat aatcgcctgg agcaagtcgc tcaccaacag gccatcagcg
     8221 cggatcacct gcggtcccat cgaatgggcg ggaaagtgag catcggaaaa aataatttca
     8281 tctccatgtc ccatctctgc cagcactttc aatagttcgg gagaaattaa cggcgaaatt
     8341 gttttcagca tttcacactt cctctataaa ttcaggttca gtttgcgggt agaaataacg
     8401 gtactgataa tgaatctgtg cgcgggcttc ttcagggctg ttaaattccc ctacgccata
     8461 ccaaccgaac agcgcagctc ctgcgacggt cgtttcggcg tcgtcgagaa cttttaccgg
     8521 aatatcaagc atattggctt taatctgatt ccacaatgtg ttgcgacttc ctccaccgac
     8581 taacaataat tcagaggcct taaagtgccc gattttttcc agcatctgta gattgcgctg
     8641 taattgcgca gttaaccctt ccagcgccgc gcgatagaaa tgcccccgcg tggtattaag
     8701 cgtcactcct tgccagccag cgttctgaca cgacaataaa tcacactgca tttttacgcc
     8761 atccgcgcta ggcgcgataa gacgagcttc ttcaatcaac atttgccagg gtgtttcagc
     8821 cgtccagaac agttttctca cccattccag cacgccggat gccagccatt gcatacctgg
     8881 gttatacaac cctgcctggc tatccagttc gcaggtggaa ccggcgtact gacttaacag
     8941 cgaagtatca acctgggcgc tacggactat taaaatttcc catgtaccgg aagagagcac
     9001 gggttcattt tggtcggcac cagcgccaaa aagggcgaac tgggtatcgt gacctgcgga
     9061 aatcaccggt atgccaacgg gtaagccgag cattgctgcg gcgctgttct gtagcgtacc
     9121 aatctgttca cccgcttcca ccagacgagg gaagagtcgg cgtggaatac cagtggcttg
     9181 taaaatttgc ggactgaaat cgcgttgctg gatatccagc atctggctgg ttccggccat
     9241 cgtgatatca gtagtgaatt cgccggttaa acggtggtta atcagcgacg aaataaagaa
     9301 ccaggcgtgc gtgcgttcca gcagttgtgg atgattttct ttcaaccaca ccaacttata
     9361 taacgtattg aaactaaagg ctccgacgcc agaaatagcc tgcaaccgct gtgcggagat
     9421 caactgttca atattgtcca taaccgctgc tgttcgcgga catttccagc taatgatcgg
     9481 atagagcaga ttgccttgct tatctaccag agcgccatcc acaccaaagg tggtgacggc
     9541 gataccgcgg atgtggcatt cagtcagttc actattgatt tgccgacagc aatcagcaaa
     9601 gcgttgcaaa atggcgtcta aagaccactg gtgccaggtg ttgttttcca tcgcgatatc
     9661 gctggcatta ggcgttgagg cgcgggcaac aatttttccc tgccgattaa ccgcgatggc
     9721 cctgacattg gtcgcgccac agtcgagtac caggataact tcttgtttca taatcgctcc
     9781 tgcaatactt caatatccat gccgtgcgca gcccaggcag aaggacgata cactttggtc
     9841 tcttcaacgt tgtgcataca taccgggata cgcagcatgg aggcgagagt gataaagtca
     9901 gcgccaacgt ggccgatggt cagaacccca tggttagcgc cccagttcgc cattaccgag
     9961 tacacatccg taaacggccc tttaccggtg aggcgcggtg caaaccaggt ggttggccag
    10021 gttgagttgg tgcgtttgtt gaggatgtca tgcacatcct tcggcaattc cacgctccag
    10081 ccttccgcga tttgcagtac cggtcccagg cctttgatga tgttgacacg agtcatggtg
    10141 aacgggacgc cgccttcggt aaggaagcgg gaagagtaac cgccgccacg gaagtattcg
    10201 tggatcgccg ggcaccattc ggtagcggcg aggcaagcgt cagcctcttg ctgagagatt
    10261 tcccagtgcg gcttcatcgt cgggttacct tcgctgtcgc gttgtttaca ggaaccgtcc
    10321 agcgcagcag aacctgagtt gatcaaatgg atgatgccgt gttctgccag tccatcgagt
    10381 ttatgccccg ttacacgctc aattgcttct ggtgaccagt aggtacgcac atcggcaaat
    10441 acctgagcgg tgccggtgag ctggtgaccc attagcattg ccacgccgtt aagactgtcg
    10501 ttttcggtcg ccacgacaaa gggttcgcgc acgccattcc agtcaaatga actgttgagg
    10561 atcgcttcgg cggtgtcacc attgggatat tgatcggtcc agtgacgttg cccctggaag
    10621 cccgcagcga tggcgttgta gccaagtgat tcttccacgc gaccaatatc ggccagtttg
    10681 ctgttgcctt gcatcatgtc gcggatacac atcgccatca gtaaactttc gcgcagaact
    10741 gcgcggcttt gctcggcatt gcgttgatac tgtttgttat tttcatcttc gccatagcgg
    10801 aagtttttat cagcccaggc cagtgccatt tccagttcgg cttcgtcgta aatcttctga
    10861 tcgatacggc gacgcagttc ggtcatatcc accgcctgga ctttcattcc cagccaggat
    10921 tcaaagaagt tgtgatcaac gatggaaccg gcgataccca tcgaaacgcc gcccagcgac
    10981 agatagcttt tacctttcat gctggcgacg gccaaaccgg cgcgggcaaa gcgcagcagt
    11041 ttttcttcaa catcggcagg aatcgatgtg tcatcggcat cctgaacgtc atgaccgtaa
    11101 atggagaatg ccgggatgcc tttctggctg tgagctgcca gagccgctgc caggtaaaca
    11161 gcgccgggac gttcagtgcc gttaaagccc caaatggctt tcgggcgggt tggatccatg
    11221 tcgatggttt cactgccata gcaccagcaa ggcgttaccg taatggtgag gcctacattc
    11281 tggctgctga atttttcttc gcaagcagcg gcttcagcca tacccgcgat acaggtatcg
    11341 gaaatgacac actcgacggc agctccgcag gcatggcgca gtttctcggt cagcagtgcg
    11401 gccgtagctt tcgccatatt cattgtttgt tcttcaagcg actcacgaac acccatgcga
    11461 cgaccgtcaa taaccgggcg gataccaatt ttcggtaagc tgattttttt cattacagat
    11521 tcctcacttt attcggaaaa tatgttcagt tagttgccgt ttgagagcgg aaacgggcaa
    11581 agataaagat gaccgcgaag cagagtgcgg ggatcagttc agcagtgggg atgttgcccg
    11641 ccgcgtcact gacaaaaccc atgaccggag tgacaatacc gccgccaata atggtcataa
    11701 cgatgaagga cgaaccgtat ttggtgtcct ggccgagatt cttaatgccc agcgagaaga
    11761 ttgttgggta ctgaatcgac ataaaggcgc tgcataaagt cagggctatt aagcccacat
    11821 gaccgccagc gaaggctgag atcaggcaca gtgccatagc gattaatgcg taggcggcca
    11881 ggactttgtg tggtgcgaag cgactgatga gccaggtacc ggtgaaacga ccaataaaga
    11941 agcacaccat ggttccggtt aaatagttag cggcaaagcc tgcagtcata cctggaattt
    12001 cttctacagc gtagcgaatc aaatagctcc agcaggccgt ttgtgcgcca acgtagcaga
    12061 attgcgctaa tactgcccag cgccagtggc gaatacgcgc caggcgagaa agcgatgcgg
    12121 agaacgatcc ttgtttggcg tcactgtgat tatcactctg caatgccggg aatttcgtca
    12181 gcatgatcag cagggcgacc agtaacacga tagccacgat gatcatataa ggtgtctgta
    12241 ccgataatac caggctgtgt ttatacgcac tcaattgctc tggagacatt ttatcgagaa
    12301 cgtcttgcga ttgatgtggc acgttagaca aaataagact ttgcccaaag acaaccgcga
    12361 taattgcgcc aaacgagtta aatgtttgcg caagatttaa gcggaagtga ccactgcttt
    12421 ccggccctaa taccgtaaca aaagggtttg cggcagtttc cagacaacct aatccggctg
    12481 caataataaa taggccaact aaaaataagg tgtagttcat tatttctgca gcgggccaga
    12541 ataatgcagc gcccagggca tataaaaata acccagtaat aa
//
LOCUS       DADKRT010000126        12464 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.127, whole genome shotgun sequence.
ACCESSION   DADKRT010000126 DADKRT010000000
VERSION     DADKRT010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12464
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.127"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(94..1185)
                     /gene="ychF"
                     /locus_tag="JQ356_002959"
     CDS             complement(94..1185)
                     /gene="ychF"
                     /locus_tag="JQ356_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HAY4622984.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
     gene            complement(1302..1886)
                     /gene="pth"
                     /locus_tag="JQ356_002960"
     CDS             complement(1302..1886)
                     /gene="pth"
                     /locus_tag="JQ356_002960"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY4622985.1"
                     /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK
                     FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
                     AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
     gene            2164..2442
                     /gene="ychH"
                     /locus_tag="JQ356_002961"
     CDS             2164..2442
                     /gene="ychH"
                     /locus_tag="JQ356_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HAY4622986.1"
                     /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
                     GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
     gene            complement(2497..4176)
                     /gene="dauA"
                     /locus_tag="JQ356_002962"
     CDS             complement(2497..4176)
                     /gene="dauA"
                     /locus_tag="JQ356_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HAY4622987.1"
                     /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVIIYPVSQQFGL
                     AGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR
                     TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA
                     AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE
                     AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP
                     VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF
                     QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPISGRLAFFPNRRAAMADL"
     gene            complement(4301..5248)
                     /locus_tag="JQ356_002963"
     CDS             complement(4301..5248)
                     /locus_tag="JQ356_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HAY4622988.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            complement(5399..6250)
                     /gene="ispE"
                     /locus_tag="JQ356_002964"
     CDS             complement(5399..6250)
                     /gene="ispE"
                     /locus_tag="JQ356_002964"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HAY4622989.1"
                     /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE
                     LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
                     FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
                     PLHRAML"
     gene            complement(6250..6873)
                     /gene="lolB"
                     /locus_tag="JQ356_002965"
     CDS             complement(6250..6873)
                     /gene="lolB"
                     /locus_tag="JQ356_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HAY4622990.1"
                     /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ
                     DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI
                     TYSQNGKNWKVVYGGYDTKTHPAMPANMELTDGGQRIKLKMDNWIVK"
     gene            7087..8343
                     /gene="hemA"
                     /locus_tag="JQ356_002966"
     CDS             7087..8343
                     /gene="hemA"
                     /locus_tag="JQ356_002966"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HAY4622991.1"
                     /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQILADEVGAEVIALSEIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA
                     WLRAQSASETIREYRSQAEHVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
                     TKSLQQAARDGDNERLNILRDSLGLE"
     gene            8385..9467
                     /gene="prfA"
                     /locus_tag="JQ356_002967"
     CDS             8385..9467
                     /gene="prfA"
                     /locus_tag="JQ356_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HAY4622992.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
                     LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
                     EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
                     PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
                     RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
                     GKLDMLIEPIIQEHQADQLAALSEQE"
     gene            9467..10300
                     /gene="prmC"
                     /locus_tag="JQ356_002968"
     CDS             9467..10300
                     /gene="prmC"
                     /locus_tag="JQ356_002968"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY4622993.1"
                     /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE
                     TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQA
                     LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN
                     IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
                     HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
                     Q"
     gene            10297..10689
                     /locus_tag="JQ356_002969"
     CDS             10297..10689
                     /locus_tag="JQ356_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HAY4622994.1"
                     /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
                     PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
                     ARIIAFPLALVVLYIIIKLATTKVPLLG"
     gene            10693..11502
                     /locus_tag="JQ356_002970"
     CDS             10693..11502
                     /locus_tag="JQ356_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HAY4622995.1"
                     /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
                     AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG
                     AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
                     SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
                     RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH"
     gene            11538..12392
                     /gene="kdsA"
                     /locus_tag="JQ356_002971"
     CDS             11538..12392
                     /gene="kdsA"
                     /locus_tag="JQ356_002971"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HAY4622996.1"
                     /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
                     EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
                     AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
                     FEELDTSK"
BASE COUNT         3111 a         3157 c         3239 g         2957 t
ORIGIN      
        1 cggtgaaatg aaaaatccac gcaattgcgt ggattttata tacttttgcg ctcttcatga
       61 gatttagcga aacctcatga gacaataaat taattagacg ttgaaaagga agttcatcac
      121 atcgccatct ttcacgatgt aatctttacc ttctgcacgc attttgcctg cttctttcgc
      181 gccttgttca cctttgtaag tgatgaaatc ttcaaacgag atggtttgtg cacggataaa
      241 gcctttttca aaatcagtat ggattttgcc cgctgcctgc ggcgcggttg ctccaaccgg
      301 aatggtccat gcacgcactt ctttcacccc agcggtgaag taagtttgca ggttcagcag
      361 cttataaccg gcacggatca cacggttcag gcccggctct tccagcccaa gctcctgcat
      421 aaactcgtca cgttcttcgt cgtccagttc ggcaatgtct gcttcaacag cagcacaaac
      481 cggaaccaca acagaacctt ctttcgccgc gatttcacgc acctggtcaa gatatgggtt
      541 gttttcaaaa ccgtcttcgt tgacgttggc gatgtacatt gttggtttca gcgtcaggaa
      601 gctcaggtaa cgaatagccg ctttctcttc agcgcttaaa tccagcgcgc gcagcatacc
      661 tgcattttcc aactggggca ggcatttttc caggaccgcc agctcagctt tcgcgtcttt
      721 atcgccacct ttggctttct tctgtacgcg atgaatcgca cgttcgcagg tgtcgaggtc
      781 tgccagcgcc agttcggtgt tgataacttc aatatcgtca gccgggttaa ctttgccgga
      841 aacgtgaatg atgttgtcat tttcaaagca gcgaacaacg tgaccgatcg cttcggtttc
      901 acggatgttg gtcaggaact ggttacccag accttcgcct ttcgatgcgc cttttaccag
      961 accggcgata tcgacaaatt ccatggtcgt gggaagcgta cgctgcggtt ttacgatttc
     1021 agccagttga tccaggcgag gatcaggcat tggtacgacg cctgtgttcg gctcaatggt
     1081 gcagaatgga aagttggccg cttcaatacc ggctttggtc agcgcgttga acagggtaga
     1141 tttcccgacg ttgggcaaac cgacgatacc gcatttgaat cccatgattt aaatcacctt
     1201 aatatcttaa taatcaacct gttattgcta acagattgca gaaatggaaa taactttgcc
     1261 tattatacac ggcactcggc aaaaatgccg cagacaacga cttattgcgc tttaaaggcg
     1321 tgcaatcggt tcgttgcttt ggtcaagcca tctgtaaacc acatttcagt acaacgcgcc
     1381 gcttcgtcaa tggcttcatc aattaacttc tgttcactaa caggcggttt gcctaacaca
     1441 aaaccgacaa ctttattttt atcgcccgga tgaccgattc cgatgcgtaa acggtgaaag
     1501 ttagggttat tacccaattt actgatgatg tctttcagtc cattgtgacc accatggcca
     1561 ccgcccaatt taaatttggc gacgccagga ggcagatcca gttcgtcgtg ggccaccaga
     1621 atttcgtccg gattaatgcg gaaaaaactg gccatcgccg caacggcttt gccgctgaga
     1681 ttcataaatg tagtcgggac taacaggcgg acatcttcgc ctccaagagt gactcgcgaa
     1741 gtataaccaa agaatttagc ctcttcgcgc agcggagcgc gcaaacgctc tgccagtaag
     1801 tcaacgaacc aggcaccagc attatgtcgc gttgcggcgt attcagcacc ggggttcgcc
     1861 aggccgacaa tcaatttaat cgtcacgttt ttttgtcctg agtgtgtaca taactggcgc
     1921 gtagtttact ggttgcgacc ccgcttgaca aaaaactgcg tatcaaatgc agataacgta
     1981 ataattgcct gagtgggcta ttagaaagtc aaggtgttca ggcgtttatt tgtaaagttt
     2041 tgttgaaata agggttgtaa ttgtgatcac gcccgcacat aacccacagg gtgttgtcta
     2101 tactttacac ataaggaaga ggggtattcc ctgttacaac ccagaaagtt ccggaggtga
     2161 catatgaaac gcaaaaacgc ttcgttactc ggtaacgtgc tcatggggtt gggtctggtg
     2221 gtaatggtgg tcggcgtggg gtattcaatc ctcaaccagt taccacagtt taatatgccc
     2281 cagtatttcg cacatggtgc agtgctaagt attttcgtcg gtgccattct ctggctggcg
     2341 ggtgcccgtg ttggcgggca tgaacaggtg tgcgaccgtt actggtgggt tcgccactat
     2401 gacaaacgtt gccgccgtag cgataatcgc cgtcatagct aacaaataat gcagtttgct
     2461 gaccagtcag tttgcgctga ctggtcaatc tcgtacttat aaatccgcca tcgccgcgcg
     2521 acgattcggg aagaacgcga ggcgtcccga gattggttga atgcctgcgc gagccatagt
     2581 gcgcagtggc tggaattcca cgttgcacac gcgcagttca catccttcgg gcagacgctt
     2641 cacaaaacgc tggaacgcat caagaccacc agcatcaagt accggaacgg catcccactt
     2701 cagaatcaca atccgtttgc cttcaagacg tgactccagg tccgtgaaca agccttcagc
     2761 agcagcaaaa aacagcgggc caataacgcg cagtaccaga acatcgtctg gaacatctac
     2821 gactaccggt gccaggcgag tcatacgtgc gatacgacgc ataaacagca gcgatgccag
     2881 cacgatcccc acgctgatgg caataaccat atcaaacagc acggtcagcg acatgcacag
     2941 cagcatgaca atgatgtcat ctttcggtgc atgacgcagc aagtcgacca ctttatgcgc
     3001 ttcactcatg ttccacgcca ccatcaacag cagggctgcc atagcggaaa gcggcagcca
     3061 ggagagcagc ggtgccagta ccagcagggc aagaataacc agaatagagt ggatcaccgc
     3121 tgagataggg gaagttgccc cggcacggac gttagcggca gaacgcgcga tggcagctgt
     3181 agcggtaata ccaccaaaga atggagcgat aatattcccc agtccctgtc caaccagttc
     3241 gctgttcgcc ttgtgtttcg tcccggtcat accatccagt accacggcgc agagcagaga
     3301 ttcgattgcg ccgagcattg ccattgagaa tgccgcaggc agcagtgtgc gaatagaatc
     3361 ccaggttagc gtgaattctg aattaggcag atcccacggc agcaccagtt gcggcagcag
     3421 ttgcggaata ccgttaccct gagaaccatc ggccaggacg tagtggaatt gcgaaccgat
     3481 ggtagcaaca tgtccgccga gcaggttaac aatccccatc accgcgcaac cagccagcaa
     3541 ggccggaagg tgaccgggta aacgaatgcc cagacgcggc caaaaaacaa gaatacctag
     3601 cgtcacaatg ccaatggcag catcacccac attaatggtc ggcagcgcca taaataatgc
     3661 gccgactttt tgtagataat gttccgggac atgggccatt tgcagaccga gaaaatcttt
     3721 aatctgcatg gtaccgatgg tgatcccgat acccgaggtg aaacctaagg tgacggaaac
     3781 cggaatatac tcaatcaggc gaccaaagcg tgccagaccc atcagaatca aaaagatccc
     3841 cgacagcaag gccgcaacca gcagtcctgc cagtccaaac tgttgcgaca cgggatagat
     3901 aattaccaca aatgccgcag tcggaccgga aacgctaaag cgtgacccac ccgtcagagc
     3961 aatgacaatc cccgcaacag ctgcggtata taaaccgtac tggggtgcca caccactacc
     4021 aatagccaac gccatcgcca gcgggatagc aataatcccg acggttatcc cggcaatcag
     4081 gtcacgggta aaccgtgcgg cagtatattt ttctttccag caagcgtcga tcagagcgcg
     4141 gaaaggcatc acatgtgagg aaaatatttt gttcacaata atgtttcatc cgtgagcgca
     4201 tcatctgtca actaaatggc aggtgaagga ggcataggtc atacaaatgg atattacaga
     4261 caaaaaaacc cgccgcagcg ggtctttgag ccgggttcga ttagtgttcg aacatggcag
     4321 agatcgattc ttcgttgctg atacgacgaa tcgcttcggc cagcatacct gacagggtca
     4381 gagtacgcac gttcggcagt gatttgattt catcgctcag cggaatggta tcgcagacaa
     4441 cgacttcatc aattacagag ttacgcaggt tgttcgccgc gttgccagag aagatcgggt
     4501 gagtcgcgta cgcaaataca cgtttagcac cacgttcttt cagagcttca gcagctttac
     4561 acagcgtacc gccagtgtcg atcatatcat cgaccagtac gcagtcacga cctgcaacgt
     4621 caccgatgat atgcatcacc tgggaaacgt tcgcacgcgg acgacgtttg tcgatgattg
     4681 ccatatcggt atcgttcagc agcttagcga tagcgcgggc acgcacaacg ccgccgatgt
     4741 ccggagaaac cacaattggg ttatccagat tcagctgcag catgtcttcc agcaggatcg
     4801 ggctaccaaa tacgttatca accggaacgt cgaagaaacc ctgaatctgt tcagcgtgca
     4861 gatccactgt cagcacacgg tcaacaccga cgctggagag gaagtctgca accactttcg
     4921 cagtgattgg tacacgagcg gaacggacgc gacggtcctg gcgcgcatag ccaaagtagg
     4981 ggataacagc ggtgatacga cctgcggaag cacgacgcag ggcatcaacc ataacgacta
     5041 attccatcag gttgtcgtta gtaggggcac aagtggactg gatgatgaaa atatcaccac
     5101 cgcgtacatt ttcattaatt tgtacgctga cttcgccatc gctaaagcga cctacagcgg
     5161 cgtcgccgag tgaagtgtac aggcggttgg caatacgttg tgctagttcc ggggtggcgt
     5221 taccagcaaa aagcttcata tcaggcacga gaagaacctc aggcatgcgt ccattggtgg
     5281 aaagaatctg ccgaaaactg tgcgggccag gcatgatcct ttccaggcag tgtattaaag
     5341 agcgcgatgc aacgtctgga acaaggtgac gttgtcaccg aaactcagct tgcccggctt
     5401 aaagcatggc tctgtgcaat ggggaaagat taacgccttt cgccacaaag ccattgagcc
     5461 attccggggc ttgctctagc acctggcggg cttcagactc tgtatcaaat tcagcaaaga
     5521 cacaggcccc tgtcccagtc aggcgcgacg gggcgtattc taacagccag gaaagcaccg
     5581 catcaacctc gcgaaaacgt tttcttgcga taacctcgca atcattgctg aattcacatt
     5641 ttagcaacgt ttctattgac ctttttggcg tattgcgcgg gagttcagga tctttaaaaa
     5701 tcaccggagt cggaatactt acaccagggt gcgccaccag ataccacttc tctggcggat
     5761 ccaccggcgt tagtatttca ccaacgcctt cggcaaacgc ggcatgcccc cgaacaaaga
     5821 caggaacatc tgcgcccagc gtcagcccca tttccgccag ctcatccatg cttagcccgc
     5881 attgccagag atgatttaat gccaccagga ccgtcgcggc attggatgaa ccaccgccga
     5941 gaccgccgcc catcggcaaa cgcttgtcaa tgctgatatt cgcaccgctt cccgtcggaa
     6001 gacgcccgct gtctgccgca gttttcatca acaatcgcgc tgcgcgaacg atcaggttat
     6061 cttcatgttc cacgccttca acgggcgtta acagacgaat atccccatcg tcacgaagct
     6121 caatgctgat ggtgtcgccg taatcaagaa actgaaacag cgtttgcagc gtgtggtaac
     6181 catccgcacg ctgaccggta atgtataaaa acagattaag ttttgccgga gagggccact
     6241 gtgtccgcat tatttcacta tccagttatc catttttaac ttgatgcgtt gaccaccgtc
     6301 ggtgagttcc atattggctg gcatcgcagg atgcgttttg gtgtcataac caccataaac
     6361 aaccttccag tttttgccat tctggctgta ggtaatttcg ctcaggcggt actggtcgtc
     6421 cagtttgtag tcggttgcat cacccggtaa acctaaaatc cactggcgca agctgttgag
     6481 cggaattggc attccggtca atttgccaat catctcttcg gcgtcatcgg cggtataacg
     6541 ctgaccttta ttgtcgacta actgcacgtt acccggttga gcattcagct ccagttccgt
     6601 gctgcccaat gggttagtga gcagcagacg gtagcgatcc tggccggttt gctgccagaa
     6661 aaagcgggcg tacacttttt gttggtcaga aatataagcg aacgcgccgc gagtctgata
     6721 ctgattaaga ttgcgcacgt cttgctgatg ctgacgccat tgtggcgaat ccgggctttt
     6781 gccaggacct ttgggcgtgg taacggaaca ggcagtgagc acaagagcag ccagcggtag
     6841 caggcggata agacgaaaat cgggcagggg catagtgatg acaagtcctt gagatacgtt
     6901 gcagttataa cccttaatgc tagcgttacc gtccgctatc gtctatgttc aagttgtctt
     6961 aattgccaga atctaacggc tttcggcaat tactccaaaa gggggcgctc tcttttattg
     7021 atcttacgca tcctgtatga tgcaagcaga ctaactctat caacgttggt attatttccc
     7081 gcagacatga cccttttagc actcggtatc aaccataaaa cggcacctgt atcgctgcga
     7141 gaacgtgtat cgttttcgcc ggataagctc gatcaggcgc ttgacagcct gcttgcgcag
     7201 ccgatggtgc agggcggcgt ggtgctgtcg acgtgcaacc gcacggaact ttatcttagc
     7261 gttgaagagc aggataacct gcaagaggcg ttaatccgct ggctttgcga ttatcacaat
     7321 cttaatgaag aagatctgcg taaaagcctc tactggcatc aggataacga cgcggttagc
     7381 catttaatgc gtgttgccag cggcctggat tcactggttc ttggggagcc gcagatcctc
     7441 ggtcaggtta aaaaagcgtt tgccgattcg caaaaaggtc atatgaaggc cagcgaactg
     7501 gaacgcatgt tccagaaatc tttctctgta gcgaaacgcg ttcgcactga aacagatatc
     7561 ggtgccagtg ctgtgtctgt cgcttttgcg gcttgtacgc tggcgcggca gatctttgaa
     7621 tcgctctcta cggtcacagt gttgctggta ggcgcgggcg aaaccatcga gctggtagcg
     7681 cgtcatctgc gcgaacataa agtacagaag atgattatcg ccaaccgcac tcgcgaacgt
     7741 gcccaaattc tggcagatga agttggcgcg gaagtgattg ccctgagtga gatcgacgaa
     7801 cgtctgcgcg aagccgatat catcatcagt tccaccgcca gcccgttacc gattatcggg
     7861 aaaggcatgg tggagcgcgc attaaaaagt cgtcgtaacc aaccaatgct gttggtggat
     7921 attgccgttc cgcgcgatgt tgagccggaa gttggcaaac tggcgaatgc ttatctttat
     7981 agtgtggacg atctgcaaag catcatttcg cacaacctgg cgcagcgtaa agccgcagcg
     8041 gttgaggcgg aaactattgt cgctcaggaa accagcgaat ttatggcgtg gctgcgagca
     8101 caaagcgcca gcgaaaccat tcgcgagtat cgcagccagg cagagcacgt tcgcgatgag
     8161 ttaaccgcca aagcgttagc ggcccttgag cagggcggcg acgcgcaagc cattatgcag
     8221 gatctggcat ggaaactgac taaccgcttg atccatgcgc caacgaaatc acttcaacag
     8281 gccgcccgtg acggggataa cgaacgcctg aatattctgc gcgacagcct cgggctggag
     8341 tagcagtaca tcattttctt tttttacagg gtgcatttac gcctatgaag ccttctatcg
     8401 ttgccaaact ggaagccctg catgaacgcc atgaagaagt tcaggcgttg ctgggtgacg
     8461 cgcaaactat cgccgaccag gaacgttttc gcgcattatc acgcgaatat gcgcagttaa
     8521 gtgatgtttc gcgctgtttt accgactggc aacaggttca ggaagatatc gaaaccgcac
     8581 agatgatgct cgatgatcct gaaatgcgtg agatggcgca ggatgaactg cgcaaagcta
     8641 aagaaaaaag cgagcaactg gaacagcaat tacaggttct gttactgcca aaagatcctg
     8701 atgacgaacg taacgccttc ctcgaagtcc gagccggaac cggcggcgac gaagcggcgc
     8761 tgttcgcagg cgatctgttc cgtatgtaca gccgttacgc cgaagcccgc cgctggcggg
     8821 tagaaatcat gagcgccagc gagggtgaac atggtggtta taaagagatc atcgccaaaa
     8881 ttagcggtga tggtgtgtat ggtcgtctga aatttgaatc tggcggtcat cgcgtgcagc
     8941 gtgttcctgc tacggaatcg cagggtcgta ttcatacttc tgcttgtacc gttgcggtaa
     9001 tgccagaact gcctgacgca gaactgccgg acatcaaccc agcagattta cgcattgata
     9061 ctttccgctc gtcaggggcg ggtggtcagc acgttaacac caccgattcg gcaattcgta
     9121 ttactcactt gccgaccggg attgttgttg aatgtcagga tgaacgttca caacataaaa
     9181 acaaagcgaa ggcgctttca gtgctcggtg ctcgcatcca cgctgctgaa atggcaaaac
     9241 gccaacaggc cgaagcgtct acccgtcgta acctgctggg gagtggcgat cgcagcgacc
     9301 gtaaccgtac ttacaatttc ccgcaggggc gcgttaccga tcaccgcatc aacctgacgc
     9361 tctaccgcct ggatgaagtg atggaaggta agctggatat gctgattgaa ccgattatcc
     9421 aggaacatca ggccgaccaa ctggcggcgt tgtccgagca ggaataatgg aatatcaaca
     9481 ctggttacgt gaagcaataa gccaacttca ggcgagcgaa agcccgcggc gtgatgctga
     9541 aatcctgctg gagcatgtta ccggcagagg gcgtactttt attctcgcct ttggtgaaac
     9601 gcagctgact gacgaacaat gtcagcaact tgatgcgcta ctgacacgtc gtcgcgatgg
     9661 tgaacccatt gctcatttaa ccggggtgcg agaattctgg tcgttgccgt tatttgtttc
     9721 gccagcgacc ttaattccgc gcccggatac ggagtgtctg gtggagcagg cactggcgcg
     9781 gttgcctgaa caaccttgcc gtattcttga tctcgggacg ggtaccgggg cgattgcgct
     9841 tgcgctggct agcgagcgcc cggactgcga aattatcgct gtagatcgta tgcctgatgc
     9901 tgtctccctg gcacaacgta atgcccagca tctggcgatc aaaaatatcc acattctgca
     9961 aagcgactgg tttagcgcgc tagccgggca gcagtttgcg atgattgtca gcaatccgcc
    10021 gtatattgac gagcaggacc cacatcttca acaaggcgat gtccgctttg agccgctcac
    10081 tgcgctggtt gcggcagaca gtggaatggc agacatcgtg catatcatcg aacagtcgcg
    10141 taacgcgctg gtatccggcg gctttctgct tctggaacat ggctggcagc agggcgaagc
    10201 ggtgcgacaa gcatttatcc tcgcggggta tcatgacgtc gaaacctgcc gtgactatgg
    10261 tgataacgag cgcgtaacgc tcggccgcta ttatcaatga caagtttttc tacactgctt
    10321 agtgttcatc ttattagtat cgcgctttct gttgggctat taaccttacg tttctggcta
    10381 cgttatcaga agcatccaca ggcatttgct cgctggacgc gcattgtgcc gccggttgtc
    10441 gatacggtgt tattgttaag cggcattgcg ttgatggcta aagcgcacat cctgccattt
    10501 tccgggcagg cacagtggct gactgaaaag ctgtttggag ttatcattta tatcgttttg
    10561 ggttttattg cactcgatta tcgtcgtatg cacagtcagc aggcgcgcat tattgccttc
    10621 ccgctggcgt tggtggtgct gtacatcatc attaaactcg ccaccacaaa agtaccgtta
    10681 ctggggtaag tcatgagatc gttagctgat ttcgaattta ataaagcgcc attgtgcgaa
    10741 ggcatgatcc tggcttgcga agcaatccgc cgcgattttc cctcgcaaga tgtttacgac
    10801 gaactggagc gtctcgttag tctggcgaag gaagaaatca gccagcttct gcctttagaa
    10861 gagcagctgg aaaaactgat cgcgctgttt tacggcgact ggggatttaa agcctcacgc
    10921 ggcgtttatc gtctttccga tgcattatgg ctggaccagg tgttaaagaa tcgacagggc
    10981 agtgcggtat cattaggtgc ggttttatta tgggtcgcga atcgtctcga tttgccgctg
    11041 ctgccggtga ttttccctac gcagctgata ttgcgcattg aatgtccgga tggcgaaatt
    11101 tggctgatta atccttttaa cggtgaatcg ttaagcgaac atatgctgga cgtatggtta
    11161 aagggaaata tcagcccgtc ggcggaactg ttttatgaag accttgatga agctgataac
    11221 attgaggtaa tccgcaaatt gctggataca ctcaaagcct cgttgatgga agaaaatcag
    11281 atggagctgg cgttacgcac cagcgaagct ttattacaat tcaaccctga agatccctat
    11341 gaaattcgcg atcgcgggtt gatttatgcg caactggatt gcgaacacgt tgcgttgaac
    11401 gatttaagtt atttcgttga acagtgtccg gaagacccga tcagcgaaat gatccgtgcg
    11461 caaataaata acatcgcgca taaacatatt gtgctgcatt aattaatcga cattttactc
    11521 aagattaagg cgatcctatg aaacaaaaag tggttagcat tggcgacatc aacgtagcaa
    11581 atgacctgcc gttcgtactg tttggcggta tgaacgtgct ggaatctcgc gatctggcga
    11641 tgcgcatttg cgagcactac gtaactgtga cccagaaact gggtatccct tacgtgttca
    11701 aagcctcttt tgacaaagcc aaccgctcct ccatccactc ttatcgtgga ccgggcctgg
    11761 aagaagggat gaaaatcttc caagagttga agcagacttt tggcgtgaaa attatcaccg
    11821 acgttcacga accaagtcag gcacagcccg ttgctgatgt cgtggatgtg attcagttgc
    11881 cggcgtttct tgctcgccag actgacctgg ttgaagccat ggcgaaaacc ggtgcggtaa
    11941 ttaacgtcaa gaaaccacag tttgtcagcc cgggacagat gggtaatatc gttgataaat
    12001 tcaaagaagg cggcaacgaa aaagtgattc tttgcgatcg tggtgctaac ttcggctatg
    12061 acaacctggt tgtcgatatg ctgggcttca gcattatgaa gaaagtgtct ggtaactcgc
    12121 cggtgatttt cgacgtgacc cacgcactgc aatgccgcga tccgtttggc gcagcttccg
    12181 gtggtcgtcg tgctcaggtg gctgagctgg cacgagccgg tatggcggta ggtctggcgg
    12241 ggctgtttat tgaagcgcat ccggatccgg aacatgcgaa atgtgatggt ccatccgcgc
    12301 tgccgctggc taaactggaa ccgttcctca agcagatgaa agcgattgat gatctggtga
    12361 aaggtttcga agaactggat accagcaagt aatctttttt gcttgaaaaa taaagtctta
    12421 gcgttctgcg ttaagacttt tttcatgggt gccagataca aaaa
//
LOCUS       DADKRT010000127        12463 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.128, whole genome shotgun sequence.
ACCESSION   DADKRT010000127 DADKRT010000000
VERSION     DADKRT010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12463
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.128"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..171
                     /locus_tag="JQ356_002972"
     CDS             <1..171
                     /locus_tag="JQ356_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="traD domain protein"
                     /protein_id="HAY4622997.1"
                     /translation="LPPGISESGEVVDMAAYEAWQQENHPDTWQQMQRREEVNINVHR
                     ERGEDVEPGDDF"
     gene            complement(180..578)
                     /gene="vapC"
                     /locus_tag="JQ356_002973"
     CDS             complement(180..578)
                     /gene="vapC"
                     /locus_tag="JQ356_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HAY4622998.1"
                     /translation="MLKFMLDTNICIFTIKNKPASVRERFNLNQGRMCISSVTLMELI
                     YGAEKSQMPERNLAVIEGFVSRIDVLDYDAAAATHTGQIRAELARQGRPVGPFDQMIA
                     GHARSRGLIIVTNNTREFERVGGLRTEDWS"
     gene            complement(578..805)
                     /gene="vapB"
                     /locus_tag="JQ356_002974"
     CDS             complement(578..805)
                     /gene="vapB"
                     /locus_tag="JQ356_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HAY4622999.1"
                     /translation="METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAG
                     ETWDEWFDGHSVSADFMDNREQPGMQERESF"
     gene            887..1306
                     /locus_tag="JQ356_002975"
     CDS             887..1306
                     /locus_tag="JQ356_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative relaxase"
                     /protein_id="HAY4623000.1"
                     /translation="MMSIAQVRSAGSAGNYYTNKDNYYVLGSMGERWAGQGAEQLGLQ
                     GSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRL
                     IEAHNQAVDFAVRHHPCGGTGLHTDDDGRTVRNGADR"
     gene            1293..6164
                     /gene="traI"
                     /locus_tag="JQ356_002976"
     CDS             1293..6164
                     /gene="traI"
                     /locus_tag="JQ356_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005079803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HAY4623001.1"
                     /translation="MLTGNLVMALFNHDTSRDQEPQLHTHAVVTNVTQHNGEWKTLSS
                     DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFS
                     GRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRD
                     AAEQRAYTRTQTPGPASQDGPDVQQAVTQAIAGLSERKVQFMYTDLLARTVGILPPEN
                     GVIERARAGIDEAISREQLIPLDREKGLFTSGIHMLDELSVRALSRDIMKQNRVTVHP
                     EKSVPRTAGYSYAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA
                     ADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA
                     ARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQEGEQRPATIISEPDRYVRYARL
                     AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDS
                     RSRYLRDMYRPGMVMEQWNPETRSHDRYVTERVTAQSHSLTLRNAQGETQVVRISSLD
                     SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT
                     LPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY
                     SSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHLALP
                     VLESKNLAFSMVDLLTEAKSFAAEGTGFADLGGEINAQIKRGDLLYVDVAKGYGTGLL
                     VSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAAARMILETSDRFTV
                     VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFL
                     HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA
                     IAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVERALSGLERVKPSQV
                     PRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYAAIVRDYTGRTP
                     EAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGQVQVMVPVLNTANIRDGELRRLST
                     WENNPDALALVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI
                     RVGTGDRIRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRVIRPGQERAEQHID
                     LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW
                     TDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDS
                     PARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDA
                     QFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD
                     IPDNSVQPGAGNGEPVMAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTE
                     QAVREIAGQERDRAAITEREAALPESVLREPQRVREAVREVARENLLQERLQQMERDM
                     VRDLQKEKTPGGD"
     gene            6184..6930
                     /gene="traX"
                     /locus_tag="JQ356_002977"
     CDS             6184..6930
                     /gene="traX"
                     /locus_tag="JQ356_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858383.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     acetylase TraX"
                     /protein_id="HAY4623002.1"
                     /translation="MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLM
                     VLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQF
                     AYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAG
                     LLMLAVSNRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVLC
                     AGKSLPRFWPGDFFPTFYACHLAVLGVLAL"
     gene            6985..7545
                     /locus_tag="JQ356_002978"
     CDS             6985..7545
                     /locus_tag="JQ356_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HAY4623003.1"
                     /translation="MTEQKRPVLTLKRKTEGTATVRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELAAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIWD
                     VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEA
                     YAGARLAKIRRQNRIKAELQAVLDEK"
     gene            7676..7888
                     /locus_tag="JQ356_002979"
     CDS             7676..7888
                     /locus_tag="JQ356_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HAY4623004.1"
                     /translation="MNGFRNSSRNGQVWRYQRAGGRAVILEVSGRWMEAAEAWRRAAC
                     VAPRTDWQQFARKRAEHCHRRCRGRG"
     gene            8132..8593
                     /locus_tag="JQ356_002980"
     CDS             8132..8593
                     /locus_tag="JQ356_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HAY4623005.1"
                     /translation="MRKYIPLVLFIFSWPVLSADIHGRVVRVLDGDTIEVMDSLKAVR
                     IRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNIN
                     QFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWRHRK"
     gene            8639..8848
                     /gene="hha"
                     /locus_tag="JQ356_002981"
     CDS             8639..8848
                     /gene="hha"
                     /locus_tag="JQ356_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY4623006.1"
                     /translation="MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLSNSERESFNSAA
                     DHRLAELITGKLYDRIPKEIWKYVR"
     gene            8887..9477
                     /locus_tag="JQ356_002982"
     CDS             8887..9477
                     /locus_tag="JQ356_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY4623007.1"
                     /translation="MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGD
                     AERILSSGEYWQRQTTLLTEREVSFMKGLFRIVDMTRWYLCPQVRVADIVQLNGNIRP
                     RSRQWWQLFRMVSQWHVDVVIVELRSFSIVAAVELDDASHLRPERRRRDILLEEVLRQ
                     AGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS"
     gene            9717..9977
                     /locus_tag="JQ356_002983"
     CDS             9717..9977
                     /locus_tag="JQ356_002983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HAY4623008.1"
                     /translation="MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEI
                     KVFVKNPLKDLMVEYCEREGITQAQFVEKIIKDELQRLDILK"
     gene            10201..10275
                     /locus_tag="JQ356_002984"
     CDS             10201..10275
                     /locus_tag="JQ356_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HAY4623009.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            10268..11125
                     /gene="repA"
                     /locus_tag="JQ356_002985"
     CDS             10268..11125
                     /gene="repA"
                     /locus_tag="JQ356_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858393.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HAY4623010.1"
                     /translation="MTDLQQTYYRQVKNPNPVFTPREGARTLPFCGKLMEKAVGFTSR
                     FDFAIHVAHARSLGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESAAGKLSITRATRALTFLAELGLITYQTEYDPLIGCYIPTDITFTSALFAALDV
                     SEEAVAAARRSRVEWENRQRKKQGLDTLGMDELMAKAWRFVRERFRSYQTELKSRGMK
                     RARARRDADRQRQDIVTLVKRQLTREISEGRFTASREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
     gene            complement(12205..>12463)
                     /locus_tag="JQ356_002986"
     CDS             complement(12205..>12463)
                     /locus_tag="JQ356_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000484486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY4623011.1"
                     /translation="AAAFLGVVPVEKYSGTSVRGCPKLSKIGPPEIRAKLYLASLCGL
                     RFNPLMKAMYERLCLRGKAKMCAIGALMRKLVHWCYGVLKT"
BASE COUNT         3008 a         3155 c         3691 g         2609 t
ORIGIN      
        1 ctgccacccg ggatcagtga atccggtgaa gtggtggata tggccgctta tgaggcatgg
       61 cagcaggaaa atcatccgga cacctggcag cagatgcagc gtcgtgaaga ggtgaacatc
      121 aatgtgcacc gggaacgcgg ggaggatgtt gagccgggag atgatttctg atgaacaggt
      181 cagctccagt cttcagttct caggccgccc acacgttcaa attcccgggt gttattagtc
      241 acaataatca gcccccgact gcgggcatga cctgcgatca tttgatcaaa tggcccgaca
      301 gggcgtccct gacgggcaag ttctgctctt atctggccgg tgtgtgtggc tgcagcagcg
      361 tcgtaatcca gaacatcaat gcgggaaaca aatccctcga tcacagcgag attacgttca
      421 ggcatctggc ttttttctgc accatatatc agctccatca gggtgaccga actgatacac
      481 attctcccct ggttcaggtt aaaacgctcc ctgacgctgg cgggtttgtt ctttatcgta
      541 aaaatgcaga tgttggtatc gagcataaac ttcagcatca gaatgactcc ctttcctgca
      601 tgccgggctg ttccctgtta tccataaaat cggcgctgac gctgtgtccg tcgaaccatt
      661 cgtcccatgt ctctccggct ggcgtaatga ttctggttcg tccgacagca atcacttcaa
      721 cgcgttttac gttttccggc aatgcaaccg cttttggcag tctgaccgct tggctgcggt
      781 tgctgagaaa tacggtggtt tccattattt gcctccttat gtggatatgt cttgtgtata
      841 tccattgtgg gattgatacc gggatatgtc aaagggatat acgtttatga tgagtatcgc
      901 gcaggtcaga tcggccggaa gtgccggtaa ttattatacc aacaaggata attactatgt
      961 gctgggcagc atgggagaac gctgggccgg ccagggggct gaacaactgg ggctgcaggg
     1021 cagtgtcgat aaggatgtct ttacccgcct tctggagggc aggctgccgg acggggcgga
     1081 tttaagccgc atgcaggatg gcagtaacag gcatcgtccc ggctacgacc tgaccttctc
     1141 cgctcccaaa agtgtctcca tgatggccat gctcgggggg gacaaacgtc ttattgaagc
     1201 acataaccag gccgtggatt ttgctgtccg tcatcacccg tgtggaggca ctggcctcca
     1261 cacggatgat gacggacgga cagtcagaaa cggtgctgac cggtaatctg gtgatggcac
     1321 tgtttaacca cgacaccagt cgcgatcagg aaccacagtt acacacgcat gcggtggtga
     1381 ctaatgttac gcagcataac ggcgaatgga agacactgag cagtgacaaa gtggggaaaa
     1441 cggggttcat tgagaatgtg tacgctaatc agattgcctt tggcaggctc taccgggaaa
     1501 aactgaaaga gcaggttgag gcgctgggct atgaaactga agtggtcggt aagcacggta
     1561 tgtgggaaat gccgggtgta ccggtggagg ccttttccgg acgctcacag actatccggg
     1621 aggccgtcgg ggaagacgcc tcgctgaaat cccgggatgt ggcggcgctg gatacgcgta
     1681 aatccaaaca gcacgtcgat cctgaagtca gaatggccga gtggatgcag acgctgaagg
     1741 aaaccgggtt cgacatccgg gcatatcgtg acgcagcgga acaacgggca tatacccgca
     1801 cgcagacacc cggacccgct tcacaggacg ggccggatgt gcagcaggcg gtgacacagg
     1861 ccattgccgg attaagtgaa cgcaaagtgc agtttatgta tacggacctg ctggccagga
     1921 cggtcggcat actgccgccg gaaaatggtg tgattgaacg ggcacgcgcc ggtatcgatg
     1981 aggccatcag ccgtgagcag cttatccccc tcgatcgtga gaaggggctg ttcacgtccg
     2041 ggattcatat gctcgatgag ctgtcagtcc gggcactcag tcgtgacatc atgaaacaga
     2101 accgggtgac cgtacatccg gagaaaagtg tcccccggac ggccggttac agctatgccg
     2161 tcagtgttct ggcacaggac cgtccgtcgc tggccattgt gtccgggcag ggcggtgcag
     2221 ccgggcagcg tgagcgggtg gctgaactgg tcatgatggc ccgggagcag gggcgggagg
     2281 tgcagattat cgctgctgac cgtcgctcgc agatgaacct gaagcaggat gaacggctgt
     2341 ccggtgaact gataaccgga cgtcgtcagt tgctggaagg catggccttc acgccgggca
     2401 gtaccgttat cgtcgaccag ggcgaaaaac tctccctgaa agagacgtta accctgctgg
     2461 atggtgccgc acgtcataac gtacaggtcc tgataactga cagcgggcag cgaaccggta
     2521 caggcagtgc actgatggcc atgaaggatg ccggggtgaa cacatatcgc tggcaggagg
     2581 gagaacagcg accggccacc atcatcagtg aaccggaccg ttatgtccgc tatgcccggc
     2641 tggccggaga ttttgcggcc agcgtgaaag ccggagaaga gagcgtggca caggtcagcg
     2701 gagtacggga acaggccata ctgacacagg ccattcgcag tgagctgaaa acacagggcg
     2761 tgctcggaca cccggaggta accatgaccg ccctgtcacc ggtctggctg gacagccgga
     2821 gccgttatct gcgggatatg taccgcccgg gaatggtgat ggagcagtgg aacccggaga
     2881 cacgcagtca tgaccgctat gtgacagaac gtgtgacggc gcagagtcac agcctgaccc
     2941 tgcggaatgc gcagggcgaa acgcaggtgg tgcgtatttc ttccctggac agcagctggt
     3001 cgctgttccg gccggaaaaa atgccggtgg cagacggtga gcgtctgagg gtgacaggga
     3061 aaattcccgg actccgcgtc tccggcggtg accgcctgca ggtggcatcc gtcagtgaag
     3121 atgcgatgac ggttgttgtg ccgggacggg ctgaaccggc caccctgcct gtgagcgatt
     3181 caccgttcac ggcactgaag ctggagaacg gctgggtgga aacgcccggg cattccgtca
     3241 gcgacagtgc gacggttttt gcctccgtca cacagatggc aatggacaat gccaccctga
     3301 acggtctggc ccgcagtggt cgtgatgtcc ggctgtattc ctcactggat gaaacccgta
     3361 ctgcggaaaa acttgcccgc catccttcct ttacggtggt ttctgagcag ataaaggcgc
     3421 gtgccggtga gacattgctg gaaaccgcta tcagtctgca gaaagccggg cttcacacgc
     3481 cggcacagca ggccattcat ctggcccttc ctgtgctgga aagtaaaaac ctggccttca
     3541 gcatggtgga cctgctgaca gaggcgaagt cgtttgctgc agaaggaacc ggttttgctg
     3601 acctgggagg ggaaatcaat gcgcagataa aacggggtga tttactgtat gtggatgtgg
     3661 caaaaggcta tggcacaggc ctgctggttt cccgtgcgtc gtatgaggca gaaaagagca
     3721 ttcttcgcca tattctcgaa ggtaaggagg cggtcacgcc gctgatggag agagtacctg
     3781 gcgaactcat ggagaaactg acatcaggac agcgcgccgc cgcccgtatg atactggaaa
     3841 cgtccgaccg tttcacggtg gtgcagggct atgccggtgt gggtaagacc acacagttcc
     3901 gggcggtgat gtcagccgtg aacatgctgc cggagagtga acgtccccgt gtcgtggggc
     3961 tggggcccac acaccgtgcg gtcggggaga tgcgcagcgc cggcgtggat gcacagacac
     4021 tggcgtcctt tctgcatgac acgcagctgc agcagcgcag cggagaaacg ccggatttca
     4081 gcaacacgct gttccttctc gatgagagct ctatggtggg caataccgac atggcacggg
     4141 catacgccct gattgcggcc ggtggcggtc gggctgtggc cagcggtgac acggaccagc
     4201 tgcaggccat cgcgcccggt cagcctttcc gtctccagca gacgcgcagt gctgccgatg
     4261 tggtcatcat gaaggagatt gtgcgtcaga cgccggaact gcgggaggcg gtatacagcc
     4321 tgattaaccg ggatgtggaa agggcgctgt ccgggcttga gcgtgtgaaa ccgtctcagg
     4381 tgccacgtct ggagggcgca tgggcaccgg agcactccgt gacggagttc agtcacagcc
     4441 aggaagcgaa actggcagaa gcgcagcaga aggcgatgct gaaaggcgag gcttttccgg
     4501 atgtccccat gacactgtat gcagccattg tccgcgacta taccggcagg acaccggaag
     4561 cacgggagca gacgctgatt gtcacgcacc tgaatgagga ccggcgcgta ctgaacagca
     4621 tgattcatga tgcacgggaa aaggccggag aactggggca ggtgcaggtc atggtgcctg
     4681 tcctgaacac agcgaatata cgcgacgggg agctgcgtcg tctctccacc tgggagaata
     4741 acccggatgc ccttgccctg gtggataatg tgtatcaccg gattgccggt atcagcaagg
     4801 atgacgggct gataaccctg caggatgcgg aaggtaacac gcggctgatt tcgccccggg
     4861 aggcggtggc tgaaggcgtc acgctgtaca ccccggacac catccgggtg gggaccggtg
     4921 acaggatacg cttcacgaag agtgaccggg agcgcggtta tgtggccaac agcgtctgga
     4981 cggtgacagc ggtttccggt gacagtgtca cactttctga cggtcagcag acccgtgtga
     5041 ttcgccccgg tcaggagcgg gcagagcaac atattgacct ggcctatgcc atcaccgccc
     5101 acggtgcaca gggggcgagt gaaacctttg ccatcgcgct tgaaggcacg gaaggtaacc
     5161 ggaaactgat ggccggcttt gagtcagcct acgtggccct gtcgcgtatg aagcagcatg
     5221 tgcaggtgta caccgataac cgtcagggct ggacggatgc catcaacaat gccgtacaga
     5281 aaggaactgc ccacgatgtg tttgagccga aaccggaccg ggaggtcatg aatgcagagc
     5341 ggctgttcag tacggcgcgg gagctgcggg acgtggcggc aggccgtgcc gttctccgtc
     5401 aggcggggct ggccggggga gacagtcctg cacggtttat tgctccggga cgtaaatatc
     5461 cgcaaccgta tgtggcactg ccggcgtttg accgtaacgg caagtccgcc ggtatctggc
     5521 tgaacccgct gaccacggat gacggaaacg ggctgcgggg attcagcggt gaaggtcggg
     5581 taaaaggcag cggggatgcg cagttcgtgg ccctgcaggg cagccgtaac ggagaaagcc
     5641 tgctggctga taatatgcag gatggcgtcc ggattgcccg tgataatcct gacagtggtg
     5701 tggtggtaag aatcgccggt gaaggccgtc cgtggaatcc cggtgccatc accggtggcc
     5761 gcgtgtgggg ggatatcccg gacaacagcg tccagccggg agccggaaat ggcgaaccgg
     5821 tcatggcaga ggtactggca cagcggcagg ctgaagaggc catccgccgt gaaacggaac
     5881 gtcgcgcaga tgaaattgtc cgtaaaatgg cagagaacaa acctgacctg ccggacggca
     5941 aaacagagca ggctgtcagg gaaattgccg ggcaggagcg tgaccgggct gccataactg
     6001 aacgggaagc cgcgctgccg gagagtgtac tgcgtgaacc acaacgggtg cgggaagcgg
     6061 tccgggaagt tgcccgggaa aatttgctgc aggagcgtct gcagcagatg gagcgggata
     6121 tggttcgtga cctgcagaaa gagaaaaccc cgggcggaga ctgatacagg aagacaaaca
     6181 ctgatgacaa cggataacac gaacacgaca cgtaacgatt cactggctgc acggaccgat
     6241 acctggttgc agtcatttct ggtctggtca cccggacagc gggatatcat caaaacggtg
     6301 gcactggtgc tgatggtact ggaccacatc aatctgatat tccagctgaa gcaggaatgg
     6361 atgtttctgg ccgggcgagg agcctttccg ctttttgccc tggtgtgggg gctgaatctg
     6421 tcccgtcatg cgcatatccg gcaaccggcc attaaccggc tgtggggatg gggaattatt
     6481 gcccagttcg catattatct ggcaggcttt ccctggtatg aggggaatat cctgtttgcc
     6541 tttgcagtgg cggcacaggt gctgacgtgg tgtgaaacgc gcagtgggtg gcgtacagca
     6601 gcggccatac tcctgatggc cctgtggggg cctttgtccg gcaccagtta cggtattgcc
     6661 gggttgctga tgctggcagt cagcaaccgg ctgtaccggg cggaagacag agcggaacgt
     6721 ctggcgctgg tcgcctgcct gctggctgtt attccggcgc ttaaccttgc caccagtgat
     6781 gcagcggcgg tggccggtct tgtgatgacg gtgctgaccg ttggtctggt gttgtgtgcc
     6841 ggaaaatcat taccccgttt ctggcccgga gactttttcc cgacgttcta tgcctgtcat
     6901 ctggctgtgc tgggcgttct ggcgctgtga cgggtgtggt atctttggcc gcaagaggat
     6961 gattcgtcag aggcagaaca cagcatgaca gagcagaagc gaccggtact gacactgaag
     7021 cggaagacag agggaacagc gactgtccgc agccggaaaa ccatcatcaa tgtcaccacg
     7081 ccaccaaagt ggaaggtgaa aaagcagaag ctggccgaga aagcggcccg tgaagcagag
     7141 ctggcggcaa aaaaagcgca ggccagacag gcgctgtcca tttatctgaa cctgcccacg
     7201 ctggatgagg ctgtgaatac cctgaagccc tggtggccgg gattatttga cggtgacacg
     7261 ccccggcttc tggcctgcgg tatctgggac gtgttactgg aagacgtggc gcagcggaat
     7321 atcccgctct cgcataaaaa actgcgcagg gcgctgaagg ccatcacccg ttcagaaagc
     7381 tatctgtgtg ccatgaaagc cggtgcctgc cggtatgaca cggaagggta tgtgacggag
     7441 catatttctc aggaggagga agcgtatgcg ggagcgcgtc tggcgaaaat tcgtcgccag
     7501 aaccggataa aggcagaact tcaggccgtg cttgatgaga aataaaaaaa gcctccccca
     7561 gagagaggag gcagggaaat aaggcttaaa aggaaataac ttccgcttcc gaaaggaagc
     7621 cagtccactg aattatttat cacaataata ctgacaacta aagggggaca agaaaatgaa
     7681 tggattcaga aacagttcac ggaacggcca ggtctggcgt taccagcgtg ccggcgggcg
     7741 ggccgttatt ctggaagtca gtggacgctg gatggaagcg gcagaagcat ggcgacgggc
     7801 tgcctgtgtt gcgcctagga cagactggca gcagtttgcc cggaaaaggg ctgaacactg
     7861 ccaccggcgc tgccggggaa gggggtaacg aaaaaagcag ccttcattac tccaggagtc
     7921 agaaggctga aaggagttta tgagatttgc ttcttaatat ccggtcgggc agtatgaccg
     7981 gacagttctg agtagcacag agtcttttcc gcattaagtc gattttttat attttgtgat
     8041 taatttcaca aaataaggtg ttattcaatg tgtgctgcac tattcagggg ggctgaaata
     8101 caggtgccat ttatctgata tggagaataa catgaggaaa tatattccac tggtattatt
     8161 tatcttttca tggccggtat tgtctgcaga tattcatgga cgggttgttc gtgtactgga
     8221 cggtgatacc atcgaggtca tggactcact gaaggcggtg cggatcaggc tggtaaatat
     8281 tgatgcaccg gaaaagaaac aggattatgg ccggtggtca acagacatga tgaaatcact
     8341 ggttgcagga aaaacggtta ccgtcacata ttttcagcga gatcgttatg gtcgtattct
     8401 cgggcaggtt tatgcaccag acggaatgaa tattaatcag tttatggtcc gggccggggc
     8461 tgcctgggta tatgagcagt acaacacaga tcccgtgcta cctgtccttc agaacgaagc
     8521 cagacaacaa aaacgtgggc tctggtcaga tgctgatccg gttcccccct ggatatggag
     8581 gcaccgtaaa taaagcgatg gcaatcctat cattcatctg ttctcagcgg gaataaaaat
     8641 ggcaaaaaca aaacaggaat ggctgtatca gttacggcga tgttcatcag tcaatacgct
     8701 ggaaaaaatt attcataaaa acagagacag tttatcaaac agtgaacgtg aatcatttaa
     8761 ttcagcagca gaccaccggc tagcggaatt aatcaccgga aagttatatg acaggatacc
     8821 aaaagagata tggaaatatg taaggtaata attcagcaat aattaattgc caggagcaga
     8881 taaataatga agttgattat ttttattctc attgttctga ttattgcagc gctacttatc
     8941 cggattatcc tcagaagtgt aaatcagcat tctcctttgc tgatgcaatt gcatgcggca
     9001 ggtatacgga ccggtgatgc agagcgaata ctgtccagcg gtgaatactg gcaacgtcag
     9061 acgacgctgc tgacagaaag ggaagtcagt tttatgaaag gactgttcag aattgtggat
     9121 atgacgcggt ggtatctgtg tccgcaggta cgggtcgcgg atatcgtcca gctgaacggg
     9181 aatatccggc cacgatcacg ccagtggtgg cagttattca ggatggtgtc tcagtggcat
     9241 gttgatgtgg ttatcgttga gctgcgttcg ttcagtattg ttgcagcagt agagctggat
     9301 gatgccagcc atttacgacc ggaacgcaga cgccgggata ttcttctgga agaggttctg
     9361 aggcaggctg gtattccgtt gctcagaagc cacgatgcca gaaaactgct gcagatgacc
     9421 ggagaatggc tgaatacaac aggggctgat cagcagtcac cggaacatcg tagctgacgc
     9481 cttcgcgttg ctcagttgtc caaccccgga aacgggaaaa agcaagtttt cctcgctccc
     9541 ggcgtttcca taactgaaaa ccatactatt tcacagttta aatcacatta aacgacagta
     9601 atccccgttg atttgtgcgc caacacagat cttcgccaca attctcaagt cgctgatttc
     9661 aaaaaactgt agtatcctct gcgaaacgat ccctgtttga gtattgagga ggcgagatgt
     9721 cgcagacaga aaatgcagtg acttcctcat tgagtcaaaa gcggtttgtg cgcagaggta
     9781 agcctatgac tgactctgag aaacaaatgg ccgctgttgc aagaaaacgt cttacacaca
     9841 aagagataaa agtttttgtc aaaaatcctc tgaaagatct catggttgag tactgcgaga
     9901 gagaggggat aacacaggct cagttcgttg agaaaatcat caaagatgaa ctgcagagac
     9961 tggatatact aaagtaaaga ctttactttg tggcgtagca tgctagatta ctgatcgttt
    10021 aaggaatttt atggctggcc acgccataag gtggcaggga actggttctg atgtagatgt
    10081 acaggagcca gaaaagcaaa aaccccgata atcttcttta actttggcga gtcagaaaga
    10141 ttaccggggc ccacttaaac cgtatagcca acaatcaagc tatgcgggga gtatagttat
    10201 atgcccggaa aagttcaaga cttctttctg tgctcgctcc ttctgcgcat tgtaagtgca
    10261 ggatggtgtg actgatcttc aacaaactta ttaccgccag gtaaagaacc cgaatccggt
    10321 gttcacaccc cgtgaaggtg cccggacgct tccgttctgc gggaaactga tggaaaaggc
    10381 ggtgggcttc acctcccgtt ttgatttcgc cattcatgtg gcacatgccc gttcgcttgg
    10441 tctgcgtcgg cgcatgccac cggtactacg tcgccgggcc attgatgcgc tgctgcaggg
    10501 gctgtgtttt cactatgacc cactggccaa ccgcgtccag tgttccatca ccacgctggc
    10561 cattgagtgc ggactggcga cggagtctgc tgccggaaaa ctctccatca cccgggccac
    10621 ccgggccctg acgttccttg cagagctggg actgattacc taccagacgg aatatgaccc
    10681 gcttatcggg tgctacattc cgaccgatat cacgttcaca tctgcactgt ttgctgccct
    10741 cgatgtatca gaggaggcag tggccgccgc gcgccgcagt cgtgtggaat gggaaaacag
    10801 acagcgcaaa aagcaggggc tggataccct gggtatggat gaactgatgg cgaaagcctg
    10861 gcgttttgtt cgtgagcgtt tccgcagtta ccagacagag cttaagtccc gtggaatgaa
    10921 gcgtgcccgt gcgcgtcgtg atgcggacag gcagcgtcag gatattgtca ccctggtgaa
    10981 acggcaactg acgcgtgaaa tctcggaagg gcgcttcact gccagtcgtg aggcggtaaa
    11041 acgtgaagtg gagcgtcgtg tgaaggagcg catgattctg tcacgtaacc gtaattacag
    11101 ccggctggcc acagcttccc cctgaaagtg acctcctcag aataatccgg cacgcgccgg
    11161 aggcattcgc acgcctgaag cccgccagtg cacaaaaaat cagcgctaca tacaaaaaac
    11221 aacctcatca tccaccttct ggtgcatccg gtcccccctg tttttgatac aaaacacgcc
    11281 tcacagacgg ggaattttgc ttatccacat taaactgcaa gggacttcac cataaagtta
    11341 caaccgttca cgtcataaag cgccagccgt cagccctaca gggtgcaatg tatcttttaa
    11401 acacctgttt atatctcctt taaactactt aattacattc atttaaaaag aaaacctgtt
    11461 cactgcctgt cctgtggaca gacagatatg cacctcccac cacaagcggc gggccccgac
    11521 cgaagccggt ttagttacaa catgcaaaca taaaccccta aaaaacccaa gtccgacgca
    11581 gaactgaaac cacaaagccc ctccctcata actgaaaagc ggccccgccc cggcccgaag
    11641 ggccggaaca gagtcgcttt taattatgaa tgttgtaact atattatcat cgctgtcagt
    11701 cctctggctg gacgtatcga gtacacgctc gtaagcggcc ctcacggccc tcacggccct
    11761 cacggccctc acggccctca cggcccgcta acgcggagat acgccccgac tgcgggtaaa
    11821 cccttgtcgg gctccgaccg cgcacagaag ctctgtcatg gctgaaaacg ggtatggctt
    11881 ggcagctacc atgttctgtc aagaaaaatc gcttgaactc cgacgtacag ccccctaagt
    11941 actgccagca agctgtcagc actaagtccc cgatacagcg cggcgtagcc gcgctaacgg
    12001 ggttaaaagg gcttacctat acttcatcat cgctgaaagc ccgcatggcc tcgcagggca
    12061 gagatgggat aggtgaaacc tatcaatacg taccggctta cgccgggctt cggcggtgtt
    12121 actcctgtac catatgtaac tacatcatgc cgccttacat gcgctacgcg catatgaaga
    12181 caaatagccc acatcaaacg gtttttaggt cttcagtacg ccatagcacc agtgcacgag
    12241 ttttctcatc agcgcaccaa tggcacacat tttggcctta cctctcaggc ataatcgctc
    12301 atacatcgct ttcatcaatg ggttaaatct cagaccacac aacgaagcca gatacagttt
    12361 cgcccggatt tccggcggac caatttttga cagtttcgga caccctctga ccgaggtgcc
    12421 ggaatatttt tcaacgggaa cgacacctaa aaatgcagcc gcc
//
LOCUS       DADKRT010000128        12151 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.129, whole genome shotgun sequence.
ACCESSION   DADKRT010000128 DADKRT010000000
VERSION     DADKRT010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12151
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.129"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(33..1742)
                     /locus_tag="JQ356_002987"
     CDS             complement(33..1742)
                     /locus_tag="JQ356_002987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY4623012.1"
                     /translation="MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSD
                     YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
                     LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVL
                     GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
                     SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDAHLQGPDWAVTDLDLS
                     LRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGG
                     MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
                     LIIDIDPDFPWQLTTLDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
                     LTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPEL
                     PLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSAE
                     LVQ"
     gene            complement(1863..3254)
                     /gene="xanP"
                     /locus_tag="JQ356_002988"
     CDS             complement(1863..3254)
                     /gene="xanP"
                     /locus_tag="JQ356_002988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HAY4623013.1"
                     /translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKTWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
                     YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
                     VFMITSLETIGDITSTSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
                     AIVLNLIFPPEKQ"
     gene            3534..4739
                     /gene="gltS"
                     /locus_tag="JQ356_002989"
     CDS             3534..4739
                     /gene="gltS"
                     /locus_tag="JQ356_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HAY4623014.1"
                     /translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
                     VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
                     GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVS
                     VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAG"
     gene            complement(4773..6854)
                     /gene="recG"
                     /locus_tag="JQ356_002990"
     CDS             complement(4773..6854)
                     /gene="recG"
                     /locus_tag="JQ356_002990"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HAY4623015.1"
                     /translation="MTGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
                     PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARV
                     VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
                     NNFRNWFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
                     LPPGRTPVTTVAIPDTRRTDIIDRVRHACITEGRQAYWVCTLIEESELLEAQAAEATW
                     EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
                     WMPETERYSNA"
     gene            complement(6860..7549)
                     /gene="trmH"
                     /locus_tag="JQ356_002991"
     CDS             complement(6860..7549)
                     /gene="trmH"
                     /locus_tag="JQ356_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HAY4623016.1"
                     /translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
                     VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
                     ADWWATMQAAG"
     gene            complement(7556..9664)
                     /gene="spoT"
                     /locus_tag="JQ356_002992"
     CDS             complement(7556..9664)
                     /gene="spoT"
                     /locus_tag="JQ356_002992"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HAY4623017.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
                     LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
                     FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
                     NIMRKIRVMPDVIKVTRNRN"
     gene            complement(9683..9958)
                     /gene="rpoZ"
                     /locus_tag="JQ356_002993"
     CDS             complement(9683..9958)
                     /gene="rpoZ"
                     /locus_tag="JQ356_002993"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HAY4623018.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
     gene            complement(10013..10636)
                     /gene="gmk"
                     /locus_tag="JQ356_002994"
     CDS             complement(10013..10636)
                     /gene="gmk"
                     /locus_tag="JQ356_002994"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HAY4623019.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
                     RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
                     IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     DEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            10894..>12151
                     /gene="ligB"
                     /locus_tag="JQ356_002995"
     CDS             10894..>12151
                     /gene="ligB"
                     /locus_tag="JQ356_002995"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418104.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
                     /protein_id="HAY4623020.1"
                     /translation="MKVWMAILISILCWQSSVWAVCPAWSPARAQEEIFRQQQQIKQW
                     DDDYWKEGKSEVEDGVYDQLSARLTQWQRCFVSEPRDVMMPPLNGAVMHPVAHTGVRK
                     MADKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSL
                     ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSL
                     GVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVT
                     DGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA
                     SVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP
                     PENRFNSLTCYFASDVCQEQFISRLVS"
BASE COUNT         2709 a         3189 c         3326 g         2927 t
ORIGIN      
        1 tacgtctgag tcgtacccgg cgagattgat gtttactgca ccagctctgc cgacgtaact
       61 tcaccgctgg aaacgatgcc agcattcatg gtttgagtca cttgctgctt tgcggcgttc
      121 acggcatgca attgcccgct aaccgtaggt ttcagcgggg cattggcctg aatatctcca
      181 ctggcggtaa gctgaatatt gccgtcgcca gtcaacggta attcaggcca tccccattgt
      241 tgcaaaatat tcaccggcac accgcgtcca ttcaggctga tatgggtctg acgttgtggc
      301 gtttgtgaaa cactggcagt ggcttccaga atgccttttt cagtaaatgc actcagttcg
      361 ctgatattca ccgtgctgct gttggcggtc agcgccagcg acgggcgacg aacatcaaca
      421 cgattgaatg tcgcggcggc ggcattcaga ttcgccgagc cactccagac gccccattta
      481 tgatcggtaa ccagcgtcag gttggcaccg taaccatcga gcgtggtgag ctgccacggg
      541 aagtcagggt cgatatcaat gatcagattg cggctggcgc taaatctctt cagttgcagg
      601 ctgtttaacc aaccgggtgt cgtttccatc cacaactgtt gccagttttt cggcaaggta
      661 tattccagcc cggcaattgc cgcatcatca aggatcaacg ttttcccgtc acgcagccag
      721 ttccctgacg ttctgaccat acccccttcc cagcggctgg tgaactggcg cagcgctacg
      781 ccctgcgggg aaaattccgc gtttataatc gggtcaaata aatgcagcga accataaatg
      841 aactcgctag cgttcatcga cagtttgcct tcttgtgtct gccagtcatc tttactgaag
      901 gtcatgttgc gcaagctgag atcgaggtcg gtcaccgccc agtccggacc ttgcaaatga
      961 gcatcgatca cttccaggcg accaatctgc aacgacggga cagagcgtaa tggcgcaaag
     1021 aagtcggtta gcgatttttc gctttgtaga cgtatatccg ccatgcgcag gttttccact
     1081 tgccagctgc cgtcggcgtt acgctgcgcg tttccggtta atgtcccgcg ggcgatgtcg
     1141 gcacccaggt tagtcagcgt aacgcgatcg ttatcaatac tgccttcaat cagtacattg
     1201 gtggcaggaa catcattgag cgaaagcgat ccggcactaa actgaatctg cgccttcgta
     1261 cccagcactt taccggcttt tggtgaccac ggaactacgc cgccatttac ccgctgcgcg
     1321 ctcagtttcc attcgctatt cgggctatta aacgccatat cacgcagttg cagacgatcg
     1381 gctttgaacg gtagcggcgc ggtctggtcg gtgagattca gcgtcccgtt ttccagcagg
     1441 atggtatcga catggcgtgg ttcggtcagt tgccgactgc ttagcgcaat gtcgacactt
     1501 ttggccacca gggtcgcggg ctgaccatca cgaccaaacg tgacattctc cagcacgata
     1561 tgagatggcg cggaaaaacg gtgatccatc gccccgaagg ccagatgata gtcgctattc
     1621 tcggaaaccc atgcgctgat atgttctgct ccccagcggg tttgcagaag aaaatagagg
     1681 ccagcgatca ccactaacag agcgatgaga atgtagagaa gcagcttccc aataaatttc
     1741 atggtcttcc attccgtgaa atgcacataa gagagttatg cacgatttac gcgcaatcct
     1801 caaggcggga atggtgaaag aggtgagact gcggcggtaa ttatcttacc gccgccagtg
     1861 aattactgtt tttctggtgg gaaaatcaga ttcagcacga tggcagtaat accgcccgcg
     1921 gcgatcccgg aggagagcag gtttttcagc cattcagggg caaactgcaa aatcagcggc
     1981 tgctgagaca cgcccagacc aaccgccagc gacagcgcga taatcagaat cgcccgacgg
     2041 ttcagcggct cacgagaaac gatacgcaca ccggaggcgg cgatggtgcc aaacattaca
     2101 agcgttgcgc cgcccagaac cggttctgga atgtgttgta caaaaccgct cactgccggg
     2161 aacagaccca gcacgatcaa catcagcgcg acgacaaaac cgacatagcg gctggcaaca
     2221 ccagtcaact ggatcactcc gttgttttgc ccgaagcagg agttcgggaa ggtgttaaac
     2281 accgccgaaa caaacgagtt caggccgttt gccagcacgc cgcctttcag gcgtttcatg
     2341 tacagcggac cggacactgg ctgttcggaa acgtcagagg tcgacgtgat atcgccaatg
     2401 gtttccagcg aagtgatcat aaagaccagc atcagcggca gcagcagact ccattcaatg
     2461 ccaagaccgt aatagagcgg cgttggcacc ataatcagtt cttgcgtcat cggttcgttg
     2521 ctttctggca acatgcccat aaaccacgcc agcgcatatc cggccgccat cgcaatcacc
     2581 agtgaggcca cgcgtaagta agggttacgt tgacggttaa gcaggataat taaggctaag
     2641 accacgcctg ccagcagcag atttttcggt gcgccgaagg tgttatcgct catggctgcg
     2701 taaccgccgc caatggacgt taacccaacc tgaattagcg acaggccgat aatcatcacc
     2761 acaacgccag aaaccagcgg cgtaataatg cggcgcgcca gatgcagaac gcgggagatc
     2821 accatctcgg tgcaacttgc cagcatcaac gtgccgaaca aagccgccat catggtagga
     2881 acatcagcac caccggtttt cagcgcggta ccgcccataa tcagcggggc aacaaagttg
     2941 aagctggtgc cctgaataga caacagcccg gagccaaccg gaccccaggt cttaatttga
     3001 ataatcgatg ccacaccgga ggcaaacagc gacatactaa taatgtgttg cgtgtcttgt
     3061 gccggtaaac ccagcgcctg gcagattaat agcgctggcg tgatcaccgc aacgaacatc
     3121 gccagcagat gctgacaggc ggcaaacagg gtttgaggaa gcggcggacg atcttcaaga
     3181 cggtaaatca gttcgctgtt ttgagtctgc gcaaccggtt gcgcattttc tgactcgagg
     3241 gtggaaacag acatcgaaaa caatcccgtg gtagcaaagc gggcatttta gctgaccgaa
     3301 agagaaaagc aaacgtttgc cacatcctca tcaaaatatt taaatgagat aaatgcactt
     3361 ttttatataa cttttggtat ttttctgctt aaaatccatg ccatttgttc attaacagct
     3421 gagaatttga cccaggaaag cataactcga tacccgtcat agttcatgaa gttgccactg
     3481 cgcgatgaag tatgacgagt atgaaagagt gatgcggata caaaggagta actatgtttc
     3541 atctcgatac tttagcaacg cttgttgccg caacgctgac gttgctgctc gggcgtaagt
     3601 tggtccattc cgtctccttt ttgaagaaat acaccatacc ggaacctgtt gcgggtggtt
     3661 tgttggtggc gctggcgcta ctagtactga aaaaaagcat gggctgggaa gtcaactttg
     3721 atatgtccct gcgcgatccg ttaatgctgg ctttcttcgc caccattggc ctgaacgcca
     3781 acattgccag tttgcgtgcc ggtgggcgtg tggttggcat cttcttgatt gtggttgttg
     3841 gtctgttggt gatgcaaaat gccattggca ttggtatggc tagcctgtta gggcttgatc
     3901 cgctgatggg gctgttggcc ggttctatta cgctttccgg cggtcacggt acgggcgctg
     3961 cgtggagtaa attgttcatt gaacgttatg gcttcaccaa tgcgacggaa gtggcgatgg
     4021 cctgtgcaac gttcggtctg gtgctgggcg gcttgattgg cggtccggtg gcgcgctatc
     4081 tggtgaaaca ctccaccacg ccgaacggta ttccggatga ccaggaagtc ccgacggcgt
     4141 ttgaaaagcc ggatgtggga cgcatgatca cctcgttggt gctgattgaa actatcgcgc
     4201 tgattgctat ctgcctgacg gtggggaaaa ttgttgcgca acttttggct ggcactgctt
     4261 ttgaactgcc gaccttcgtc tgtgtactgt ttgttggcgt gattctgagc aacggtctgt
     4321 caataatggg cttttaccgc gtctttgagc gtgcggtatc cgtgctgggt aacgtaagct
     4381 tgtcgttgtt cctggcgatg gcgttgatgg ggctgaaact gtgggagctg gcttcgctgg
     4441 cgctgccgat gctggcgatt ctggtggtac agaccatctt catggcgttg tatgccatct
     4501 tcgttacctg gcgcatgatg ggcaaaaact acgatgcggc agtgctggct gcgggtcact
     4561 gtggttttgg cctcggtgca acgccaacgg caatcgccaa catgcaggcg atcactgaac
     4621 gctttggccc gtcgcacatg gcgtttttgg tggtgccgat ggtcggtgcg ttctttatcg
     4681 atatcgtcaa tgcgctggta attaagttgt atttgatgtt gccgattttt gccggttaac
     4741 cgatgaagcg gcggtcttct caccgccgcc ttttacgcat tcgagtaacg ttctgtctcc
     4801 ggcatccagc gttctatcaa ggcttttgcc tgttgtgggt aacgttcgtg aatatgtcgc
     4861 gccaggcgct gaacttccgg gatcatcgcc tgatcgcgca gtaaatccgc cactttaaat
     4921 tcagcattac ccgtctgacg cgtgcctaac aattcgccag ggccgcgaat ctccagatct
     4981 ttttgcgcaa tcacaaaacc gtcgttactg tcgcgcagca cttgcaggcg aatttgcgcc
     5041 gttttagaaa gcggcgtttt gtagagcagc acgcagtgag aagccaccgc gccacgacct
     5101 acgcgcccgc gcagctggtg taactgcgcc agacccagac gctcagggtt ttcgataatc
     5161 atcaggctgg cgttaggcac atcaacaccg acttcaataa cggtagtggc aaccagcaga
     5221 tgtagctcac cttgtttaaa cgacgccatc accgcctgtt tctcggctgg tttcatccgc
     5281 ccgtgtacca ggccaacatt caattctggt agcgccagtt tcaactcttc ccaggtagct
     5341 tccgccgcct gcgcttccag taactctgac tcttcaatca acgtacaaac ccagtacgcc
     5401 tgacgacctt cagttatgca ggcatggcgc acgcggtcaa tgatgtcggt acggcgggta
     5461 tcaggaatag cgaccgtagt cactggcgtg cggcctggcg gcagctcatc tatcaccgag
     5521 gtatcgagat cggcatacgc cgtcattgcc agcgtgcggg ggatcggcgt ggcggtcatg
     5581 atcaactgat gcggatggaa gccttgctgc tggcctttct cccataacgc cagacgctga
     5641 tgcacgccaa agcgatgttg ttcgtcgata atcaccagcg ccagaccgtt aaactgcacc
     5701 tgttcctgga agatggcgtg cgtaccaaca atcatctgca cctgaccgct ggcgatggct
     5761 tcctgctgag acagtcgcgc tttgcctttc tgcttaccgg cgagccagcc cacttcgata
     5821 ccgagcggtt caaaccagtt gcggaagtta ttggcgtgct gttcggcgag taattcggtt
     5881 ggtgccatca atgccacctg tttgccgtgg gcaatcgcac gcagcgcggc gagggcggcg
     5941 accagcgttt taccggaacc tacatcgccc tgtaccaggc gcatcatcgg cacatccagc
     6001 gccatatcgc gctcgatctc cgccactacg cgtgcctgtg cgcccgttgg cttgaacggt
     6061 aaggctgcga ggagtttatt tttcagcgca tcattggcgc tcagcggctg ggcatgaaaa
     6121 cgctgtgctc cggcacgtaa ggctaacatg ctgaggttgt gcgccagcag ttcttccaga
     6181 atcagacgac gttgcgccgg atgctgcccg gtttccagat cgctaagctg tagcgtcggt
     6241 ggcgggcggt gcaaagtgcg caacgcttcc ggtagcgtca tcattccttg tgacagttcc
     6301 ggcggcagga gttcttcaat ggcgcaggtg tcgagcagat ccagcgcctg gtcggttaat
     6361 ttacgcagcg tggcctgctt tacgccttcc gttgttggat aaaccggcgt gagcgtttcc
     6421 tgtaattctg gcgtgctgag atcgccctgc acgcggtatt ccgggtggat catctccgca
     6481 ccatatttac cgcgctttgc ttcgccataa gccagtacac ggcggcccgt cgccaggcta
     6541 tttttcattg ccgcgctgaa attgaaaaag cgcatggtga ggatgccgga accgtcgctg
     6601 atctggcagg tcatcatccg ccgaccgccg aaggagatat tgcagttcag cacttcgcct
     6661 tccaccgtgg cataaacgcc cggcagtagt tctccgatgg ggtagagatg ggtgcgatct
     6721 tcgtagcgca ggggaaggtg taagagtaga tcctgcacgg tatgcaggtt gattttcgcc
     6781 agtttgttac taagtgctgc gccaacgccc gttagggaac tgagtgggac agcatctaac
     6841 aggcgacctg tcatggcact taccctgcag cctgcatagt agcccaccag tcggcatcag
     6901 cttcgatctc gccttgctga ttgacgtggg gataaggcag gcctttgcgt tttgcgactt
     6961 tcgccagcac cggatagccg ccttcaaaca acaggcgttg ttgctctgct tccggcaaca
     7021 tgctgttttc acgcaggtac atgcctgcat tttgccgctg acgctgggct tcgtaaagaa
     7081 tgagggctga ggcaacggaa acattcagcg actgcaccat gccgatcatc ggaatgatga
     7141 tgtcctgatc cgccagggcc aatgcttcct gcgtgatgcc cgttttctcc tgtcccatca
     7201 aaatgcaggt cgggcgagtg taatcaattt cgcggaaatc gacagcgtta tcagaaagat
     7261 gggttgccag aatctgcatg ccctggcctt tgagatgagc gacggcatcg ccaatggtgc
     7321 ggtgtgtttt cacctgtacc cagctgttac tacccgccgc tgccgaagcc atggtgcgca
     7381 tgcggctacc aggccagacg gcgtgaactt catgtacgcc aacggcatct gcggtacgaa
     7441 taatcgcaga aacgttatga ggtttgtgga cctgctccat gcagacggtc agatcaggct
     7501 gccgcctggc gagcatttcg cagatgcgtg cataacgtgt tgggttcata aaacattaat
     7561 ttcggtttcg ggtgacttta atcacgtctg gcatcacgcg gattttgcgc atgatattcg
     7621 ccagatgcac acggtcacga gcggtcagac gaataaaggc gctgtagacg cgaccatctt
     7681 tctcttccgt attcaaactt tgaatattcg aagtcgtggt gttaattgcc gccgtcaggt
     7741 ttgccagcgc accctgatga ttgaacatct ccaccttgat ttcggtgatg aactcctgcg
     7801 ccgtctcttt atcccattcc acagccataa acttctctgg ctctttctgg tagccacgga
     7861 tgttacggca ggattcatgg tggatcacca gacctttacc ggggctgacg tgggcgataa
     7921 tcgggtcgcc aggaataggg cggcagcatt tcgcaaaggt gatcagcacg ccatccgcgc
     7981 ctttgatcgg cagatgcccg tggctttgag tcgccggtgg aatggaggcg tccccatgtt
     8041 gtagattttt cgcgaccacc acgctcattg cgttaccaag gccgatttct gccagcagat
     8101 cgtcaagcgt tgccagcttc atgcgatcca gctcgcgctg aatattttcc tgcgggattt
     8161 cattgagctt acggctacca cccaaagcat ggttgagcag acgacggccc aggcttacag
     8221 aatcatcacg cttgaggttt ttcagcaact gacgaatttt ggcgcgcgct ttcgagctaa
     8281 cgacaaagtt cagccaagcg gcattcgggc gagcgcccgg agcggtaatg atttcaacgg
     8341 tctgaccgct agtaagcggc tgcgacagcg ggtaaggctg gcggtcgacg cgtgcgccca
     8401 cgcaggcatg gccgatatcg gtatgcactg cataagcgaa gtcgacgggc gttgcaccgg
     8461 caggcagctc gacaatgcgc ccttccggtg tgaaaacgta aatctcatcc gggaagagat
     8521 cggatttaac gctctcgata aattcaaacg aactaccggc gctctgttgc agctccagca
     8581 ggctttgcat ccagcgctgg gcgcgtattt gtgcggtagt actggtttcg ccgtgctctt
     8641 tataagccca gtgcgcggca acacccatct ccgccatctg atccatatct tcggtacgga
     8701 tctggacctc aaccggcacg ccgtgcgggc caatcatcga ggtgtgcaac gactgatagc
     8761 cgttcgcttt tggaatggcg atatagtctt tcacgcggcc cggacgcggc ttgtacaggc
     8821 tgtgcatctg gcccagcacg cgataacagg tgtcagaatc attgacgatc acgcggaaag
     8881 cgtagatgtc catgattgag tgaaaacgct gctctttgag caccattttg cagtaaatcg
     8941 aataaagatg cttttcgcga ccactgacgc ggcacggtat tcccgcttcc tgcaaacgcc
     9001 cttcgatttc agaaagaatc ttctggatca tctctttacg gttgccgcgc gcggctttca
     9061 ccacttcttt gattacgcga taacggttgg gatacagcgc ctcaaaaccc agctcttcga
     9121 gttcggtttt aatgtggtgg atacctaaac ggtgcgccag cgggctgtaa atttcgagag
     9181 tttcacgggc gatgcggcga cgtttgtccg ggcgaagtga gcccagcgtg cgcatgttgt
     9241 gggtacggtc ggcaagtttg atgaggatga cgcggatatc ctgcaccatc gccataatca
     9301 tcttgcgaaa gttttcggcc tgcgcctctt tcttatcgcg gaacttgagt ttatcaagtt
     9361 tcgacacccc ctctaccagc tcggcgacgc ttttaccaaa aagctgttcc atatcctggt
     9421 aggtggcggg agtatcttca atcacgtcat gcagcagcgc cgccatcagc gtttcatagt
     9481 cgagtttcat ctcggccaga atgcaggcaa ccgctaccgg gtgcgtgata tagggttcac
     9541 cgcttgaacg tgtttgcccc tcgtgagcat cacgtgcaac gagatacgcc tgccgcagac
     9601 gcttgatttg gtcttccggc aggtaggttt gaatcagttg attcaggctt tcaaacagat
     9661 acaagggcga cccgctttgt gattaacgac gaccttcagc aatagcggta acggcttgta
     9721 attcagcggc ttcctgctct tgctgttcct ggcgttcgcg aacgtcgagg atctggttgt
     9781 tgatcagacc ttcttcgatt tcgcgcagcg cgattacagt ggttttatcg ttttcttccg
     9841 gtaccagcgg atcctttccg cctacctgca tctgacgagc gcgacgcgcg gcgaccagta
     9901 ccaggtcaaa acggttacca attttctcta cagcgtcctg aacagttacg cgtgccatac
     9961 ttaaaaagct ccacaggtga agaaatgact gggcatgata ctgaaatcag gttcagtctg
    10021 ccaacaattt gctgattaaa gcgtcatgac gctgcttttg gcggctcatg cgcagacgtt
    10081 cggcgcgaat aatggtcttc aaatcggtca acgcggtatc gaagtcatca ttcacaatca
    10141 ggtaatcata ttcgtcgtaa tggctcattt ctgcaacagc ttgcgccata cgctttgcaa
    10201 tgacctcttc gctgtcctga ccgcgaccgc gtagacggcg gtccagttca attttagacg
    10261 gcggtaaaat aaagatactc cgcgcgtgcg gcatcttctg gcgaatttgc tgcgcgccct
    10321 gccagtcgat atcgagaaaa acatcgacac cggtcgccag tacttgctca atggcctcac
    10381 gcgaagtgcc atagtaatta ccaaaaactt ctgcgtgttc gaggaacgca tctctgctaa
    10441 tcatttcttt aaattcatca tgattaacaa agaaataatg ttcaccgtgg acttcaccag
    10501 gacgcggttg gcgtgtggtg tgtgaaacag aaacctgggt gtcatacaac ggttgggttt
    10561 ttaataaagc ctgaatcagg ctggatttac ccgcgccact gggggcagaa acaatataaa
    10621 gcgtgccttg agccatgagt atctttcgta tgtgattagc gaaataaagc ctacatacga
    10681 gcttattata cacggcgcgg ccatgtgacg tagcccttgc tcacactttt tgcgcaaagt
    10741 tgttgcgttt tgcgtagctg cttccgcatt tgcctgtgat ttactgcaat aaagacgatt
    10801 ctcaggaagc gtcctcgcag actccgtttt tgccactcgg ctttgccttc accacgttgt
    10861 atatctgcca gcctgactac agcggaggtg aagatgaaag tatggatggc gatattaata
    10921 agtatcttgt gctggcaatc atctgtgtgg gcggtctgtc cggcctggtc gccagccaga
    10981 gcacaggaag aaattttccg ccagcaacag caaataaaac agtgggacga tgactactgg
    11041 aaggaaggaa aaagtgaggt ggaagacggt gtttacgatc agttaagcgc ccgtcttacg
    11101 cagtggcaac gctgctttgt gagcgagccc cgcgacgtga tgatgccgcc tttaaatggt
    11161 gcggttatgc atccggttgc ccatacgggt gtacgcaaaa tggcggataa aaacgcatta
    11221 agtctgtgga tgcgagaacg tagcgatctt tgggtgcagc caaaagttga tggcgttgcg
    11281 gtaaccctgg tttatcggga cgggaaactg aacaaagcaa tcagtcgcgg taatggcctg
    11341 aaaggcgagg actggacgca gaaagttagc ttaatttccg ctgtgccgca aaccgttagc
    11401 gggcctttag ccaacagtac gcttcagggg gaaatatttc tccagcgcga ggggcatatc
    11461 caacaacaaa tggggggaat aaatgcccgc gcaaaagttg ctggcttgat gatgcgccag
    11521 gacgatagcg acacgctgaa ttctctgggc gtttttgtct gggcatggcc ggatggaccg
    11581 cagttaatgt ctgatcgttt aaaagagctg gctaccgcag gttttactct aacgcagacg
    11641 tatacccgtg cggtgaaaaa tgctgatgaa gttgcgcgcg tacgcaatga gtggtggaaa
    11701 gcggaattac ccttcgtcac cgatggcgta gttgtacgag cggcgaaaga gccagaatcc
    11761 cgccattggc taccgggcca ggcagagtgg ctggtggcct ggaaatatca acctgtagct
    11821 caggttgccg aagtgaaggc gattcagttt gcggtgggta agagcggtaa aatatcggtg
    11881 gttgcgtcac tcgcatctgt catgctggat gataaaaaag tccagcgggt gaatattggt
    11941 tccgtcaggc gctggcagga gtgggatatt gcgcctggtg atcagattct cgtcagcctt
    12001 gccggtcagg gtattcctcg cattgatgat gtggtgtggc gcggtgcaga acgtacaaaa
    12061 ccgacaccgc cagaaaaccg ctttaactcg ttgacctgct actttgcttc tgatgtttgt
    12121 caggaacagt tcatttcacg cttagtcagt c
//
LOCUS       DADKRT010000129        12067 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.130, whole genome shotgun sequence.
ACCESSION   DADKRT010000129 DADKRT010000000
VERSION     DADKRT010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12067
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.130"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            16..192
                     /locus_tag="JQ356_002996"
     CDS             16..192
                     /locus_tag="JQ356_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY4623021.1"
                     /translation="MSALFFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGTNTLLA
                     CCCLLRPEEVNSEY"
     gene            182..355
                     /locus_tag="JQ356_002997"
     CDS             182..355
                     /locus_tag="JQ356_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HAY4623022.1"
                     /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM
                     TGLESYDVKIKIM"
     gene            complement(404..1476)
                     /locus_tag="JQ356_002998"
                     /pseudo
     CDS             complement(404..1476)
                     /locus_tag="JQ356_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
     gene            complement(1548..4292)
                     /gene="torS"
                     /locus_tag="JQ356_002999"
     CDS             complement(1548..4292)
                     /gene="torS"
                     /locus_tag="JQ356_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415513.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HAY4623023.1"
                     /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA
                     LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ
                     GFDTTAIEQQEQEISRSLRQQGELVGRRLQLRQQQQQLSQQIVAAADEIARLAQGQAN
                     NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM
                     NLGLEQIQKNAPMLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY
                     QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL
                     LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG
                     RLMDAFRSTVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA
                     MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG
                     GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDVPTALMGDPRRIRQVI
                     TNLLSNALRFTDEGQIVLRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG
                     GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL
                     RLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDVD
                     GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL
                     QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK
                     RAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI
                     "
     gene            4375..5364
                     /gene="torT"
                     /locus_tag="JQ356_003000"
     CDS             4375..5364
                     /gene="torT"
                     /locus_tag="JQ356_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HAY4623024.1"
                     /translation="MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRA
                     WKLCALYPSLKDSYWLSLNYGMQEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSF
                     PDLQKQVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMP
                     GPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAG
                     TAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQA
                     IRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK"
     gene            complement(5337..6029)
                     /gene="torR"
                     /locus_tag="JQ356_003001"
     CDS             complement(5337..6029)
                     /gene="torR"
                     /locus_tag="JQ356_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
                     /protein_id="HAY4623025.1"
                     /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQT
                     QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
                     PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
                     AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
                     HGECYFLAADVC"
     gene            6149..7321
                     /gene="torC"
                     /locus_tag="JQ356_003002"
     CDS             6149..7321
                     /gene="torC"
                     /locus_tag="JQ356_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HAY4623026.1"
                     /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST
                     TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ
                     TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQM
                     KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK
                     GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD
                     VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG
                     APEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDIAGKAHGDKKEEK"
     gene            7321..8859
                     /locus_tag="JQ356_003003"
     CDS             7321..8859
                     /locus_tag="JQ356_003003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001063167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HAY4623027.1"
                     /translation="MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRSATAAQAAD
                     VISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDCRIAGLPDCRIA
                     GLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQ
                     KTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVG
                     SMEVYEQQTSWLLVLQNSKTIMLWGSDLLKNQQANWWCPDHDVYEYYEQLKAKVAAGE
                     IEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYC
                     VGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRM
                     QHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPV
                     HDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQI
                     NRII"
     gene            8872..9909
                     /locus_tag="JQ356_003004"
     CDS             8872..9909
                     /locus_tag="JQ356_003004"
                     /inference="COORDINATES: protein motif:HMM:NF012602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HAY4623028.1"
                     /translation="METVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGI
                     IAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRG
                     VHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNY
                     DDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKE
                     PVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGG
                     EPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGAVEQVTAFNGPVEIVAQ
                     CEYVPASQVKS"
     gene            9906..10505
                     /gene="torD"
                     /locus_tag="JQ356_003005"
     CDS             9906..10505
                     /gene="torD"
                     /locus_tag="JQ356_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HAY4623029.1"
                     /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL
                     KSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ
                     EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
                     LWQWLPEFAARCHQYDSFGFYAALSQLLLVLVECDHQNK"
     gene            complement(10598..10903)
                     /gene="cbpM"
                     /locus_tag="JQ356_003006"
     CDS             complement(10598..10903)
                     /gene="cbpM"
                     /locus_tag="JQ356_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HAY4623030.1"
                     /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
                     FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
     gene            complement(10903..11823)
                     /gene="cbpA"
                     /locus_tag="JQ356_003007"
     CDS             complement(10903..11823)
                     /gene="cbpA"
                     /locus_tag="JQ356_003007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HAY4623031.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF
                     GQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
                     NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
                     PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
                     PKPDENTAALWQQLADAQSSFDPRKDWGKA"
BASE COUNT         2896 a         3098 c         3197 g         2876 t
ORIGIN      
        1 cgtggagcct tttttatatc tgccttattt ttcttcaacg ctgtatgtat agtaagcgat
       61 aacctgttga ttattgaatc tttcggggag atggcttata acatttctta cctgaccagg
      121 gtaccgggaa ccaacacctt actggcgtgt tgctgtcttt taagaccaga agaggttaac
      181 agtgaatatt gaagagttaa aaaaacaagc cgaaacggaa atcgccgact ttatcgcgca
      241 aaaaatcgcc gagctgaaca agaatacagg gaaagaagtc tctgaaattc gcttcaccgc
      301 acgagaaaaa atgaccgggc ttgaaagtta tgatgtcaaa atcaaaataa tgtgattttg
      361 tgaacatcac cccgtgcgag gtgatgttcc gcttgttgct aatttagtga tcaatcattg
      421 gcgcttgtgg aattaagcgt cggtacaatt cctccggcac cgggctttgc catactcccg
      481 catacattgc gtaaccaatc accgcgaaca taatccccag aaccagtagc gtcattaacc
      541 agccagacaa cgcaaaagct tttttatttg ccgcaggttt ttgcagtgaa aaggtcaatg
      601 ttgaggctac cggacatgac tctacgcaag tcatacagcc ggtacattcc actgttcgta
      661 cctgaattaa tttatctacc gggatccgtg atgggcaatt ttttgcgcat ttgccacagc
      721 cgatacaact ttcggcattg cgacgaatct taaacggcga taatagcgaa accacgccca
      781 tcagcgcgcc atatgggcaa agataacgac accaggcatg gcgaataaac aggctggcaa
      841 tcagcaaaac ggtcacgctg attaatgtcg cggtccccat atgacgaaag aaatcgagca
      901 tttttacgtc catcaccacg ctgtagggcg acaacataaa atagtgaatc gcctgagcgg
      961 gcatcaataa cgcgatatag agaaaaaaac tcaacagcaa atacttcacg ccgcgcagag
     1021 gaatatccag ccagcgggga aggacacatt gccgaccaaa cagtttgtta ccgagatcgc
     1081 cgattaattc agaaagcgta ccaaccgggc ataaccatga gcaaaaggcc tttttgagta
     1141 atagactgat gacgataaaa gcgaccaata acagcatcgc ggagcgtgga cggacggtaa
     1201 ctgacctgtt gtaaggctat atttcagatt catcagaccg gcaatcggta gccagccttc
     1261 gatacctccc ggtctggcga caaatgtcgt gctacttgcc gtttcgtaat agcgcaccca
     1321 ataccagaac gtgatggcaa tataaatatt cattgccaac agtaataatt gcgtcgcttt
     1381 acgccaggtc gtggcattgc gccagtcatt ccacggtaat ttgccgcccg tcgtgcctgg
     1441 ccgccgctgc cagcgggttc tttttttctc tgccatgatt ttgccagtcc gttaagttgc
     1501 ataccaaatg ccactatttt agttgttctt aactggctga tattgattca aatcgcgttc
     1561 aggtctttct tatgcaacca tgcttccaga gcggcaacac tgcgtgtaat ttcttcgtgt
     1621 ggaagggggg cagataatgg ctgctgctcc agttgtgcgc atagctggct ggcgatacgc
     1681 attcccaaac tcgagcaact gctttttagc tgatgcgcgg cacgctttat tttctcgcta
     1741 tcctgactgg cgcgggcaat gtcgatttca tcgagaagcg gcagggcatg ttgtgtaaat
     1801 aataccagcc attcgtggat cttctccgtc cccattaact gagcatcttc attgagttgc
     1861 gatacatcca gcgattgatc gttattgact tgcagttgga gatagtgcgc cagtaactga
     1921 ccgagcactt cacgcggcac cggtttaggg ataatcccgc ggaataatga actggtacgc
     1981 tggcgcagcg tttcgtcaat gacatgggcg ctaaagccaa tcaaaaccag cgacggatat
     2041 tgctgtgcca gttgtcgggc aagcgtaatg ccgtcgacat ccggcagatc aaaatccacc
     2101 agtgcggcag caaacggttc gctattttgc agtgtctcta aagcctgcgc ggcattgcca
     2161 acagcaacaa cctgcgcacc actggtgttc agcatctcaa cggtaattcg ctgggttagc
     2221 gggttatctt caattaacag caaacgtaaa ccgtcaagac gcaccgcctg attgactgtt
     2281 tttggcacgg gtgccgtggc aacacgtaac ggcaagcgta aacaaaaaca gcttccaacc
     2341 tccggcgtgc tggtggcgct cagttcgccg cccatcgcct gggccagacg gctactgata
     2401 gtcagtccca gcccggtgcc gccgcgtttg ccgcttacct gcacaaatgg ctggaagatt
     2461 tctgccagtt tcgcgggatc aataccgcag ccgctgtctt ccacttcgac cagccattgc
     2521 tcgccatcag tgcggctacg taaaacgatc tgcccttcgt cagtaaaacg cagggcgttg
     2581 ctcaacaggt tggttataac ctgacgaata cgtcgcggat cgcccattaa cgcggtcggt
     2641 acatcgtcgg caattgctgt tgccaggcga atcgggcgac ctttcacccg tccgctcatt
     2701 aattgcaggg tactttccag cagcgggcgc ggttcaaagg gctcatcgct gaccgaaaca
     2761 ttcttgccac ctgcttcgat agccgaataa tcgagaatat cgttgaggat ggtcagcaac
     2821 gattcgccag agtcggtaat cgcccgcaaa tcatcacgct gggcgttaag tgcggggtta
     2881 tctgccagca gttgagcagt gccgagaata ccgtacagcg gtgtgcggat ctcatggctc
     2941 atcgccgcca gaaaggccga ttttgcctgg ctggcttttt ctgcttccgc ccgtgcctgt
     3001 cggtgttcta tcaccagttc ctgcaattca gctgtacgcg ctttgacctg cgccgccagc
     3061 tgttcacggt ggcgattcag tgcatgaaca gtgctgcgaa acgcatccat cagccgcccg
     3121 atggtatcca gctcccgtac gccagcggtt tccgggaaag gggagtcaat atcaccgtcc
     3181 agcagccgtt gcagcgcctg cgtttgttcg gcaagtggac gcgtgactga gcgataaacc
     3241 acgcgccaaa ggatcagaat cagtgcgcaa agtgaaacca tccccagcaa taacaggctg
     3301 tattgcccgc gtgcactggc tttttccaga tgcgccagtc cgtgctgatt acgcagctca
     3361 atggtgtcga ccagctgact gacttcgcta ctaaactgcg cgaactgggc gatgttattt
     3421 tgtgcgagag tttgtaggtg attgctgatt tcactgtcct gctgatacag cgccagcaaa
     3481 tcgctatatt ggctaacggt agttaacgtt gttgcgacct gcgcacgaac acccggatct
     3541 tcaatgcgta tttgccgacg ttgcagaatt ttcaccgcat tattgagctg cttttccagc
     3601 attggtgcat ttttctggat ctgctccagc cccagattca tcaccatttg ctgcacccgc
     3661 agagcgctaa ggcgcagttc attcatctgg ttaacatact caagatcgat atcaatcagc
     3721 cgatcgagtg cactttcagc agcctgacgc tgatcttgtt cgatcaaatc gtaaatcccg
     3781 gcctgggtcg ctccagcgga agttgtcgca ttattcgcct gaccttgcgc caggcgtgcg
     3841 atctcatcgg cggcagcgac tatctgctga ctgagttgct gttgttgctg gcgtagttgc
     3901 agacgccgcc ccaccagttc cccttgctga cgtaacgaac gggagatctc ctgctcctgt
     3961 tgttcaatag cggtggtatc aaaaccttgt tcccgtaacg cttgcagcaa cgcattaatc
     4021 ttcaggcttt gtgcggtgag cattcgcccc tgcgcctgcc acatcttttc gttatcggca
     4081 ctggtcaggt tctgcgcggc gaaaagttcc caggcgctgg cttcgctcaa ctggcgcgcc
     4141 atattcatgg taggaatcaa tgcctgagtg ttgtcttttt ccacctggct gataaagcgc
     4201 aggttgtacc atcccaccag ggtactggtc agggttaaca gcgccatcag ggcaaagccc
     4261 atccagagtc ttcgggtcag ggttaaattc acggtcggtg cactttaggt gaaaaaggtt
     4321 gagtcgcaaa gcagaatgca tctagcataa agccttatta ttgattaggc tatcatgcgc
     4381 gtactgctat ttttacttct ttcccttttc atgttatcgg cattttcggc tgataacctg
     4441 ttgcgctggc atgatgcgca gcattacacg gtgcaagcct ctacgccgct taaagccaaa
     4501 cgcgcatgga aactgtgcgc gctttatccc agcctgaaag attcatactg gttatcgttg
     4561 aactatggta tgcaggaggc aggcggctac agccagttgg ctacccagca agcacaaatc
     4621 gaccagtgta aacagtgggg cgcagaggcc attttgctcg gtagtagcac tacgtcattt
     4681 cccgacctgc aaaagcaggt agcaaatctg ccggtgatcg aactggtaaa tgctcttgat
     4741 gatcccctgg tgaaaagccg cgttggtgta ccctggtttc agatgggcta tcaacctggg
     4801 cgatatttgg tgcaatgggc gcacggtaaa ccactgaacg tgctgttgat gcccggaccc
     4861 gataatgccg ggggcagtaa agagatggtc gagggttttc gcgcagccat tgccggaagc
     4921 ccggtgcgta ttgttgatat tgcgcttggt gataacgata ttgaaatcca gcgtaacctg
     4981 ttgcaggaga tgctggaacg ccacccagaa atcgacgtcg ttgccggaac agccattgcg
     5041 gcagaggcgg caatgggtga agggcgtaac ctgaaaacgc cgcttaccgt ggtgtcgttt
     5101 tatctttcac atcaggtgta tcgcgggctg aagcggggaa gagtgattat ggctgccagc
     5161 gatcaaatga tctggcaggg ggaactggcg gttgagcagg ccatcaggca attacagggg
     5221 caatcggtgt ctgataatgt cagcccaccg attttagttc tgacgccgaa aaatgccgac
     5281 cgtgaacata ttcgccgctc gctgtcacca gggggatttc gtccggtcta tttttatcag
     5341 cacacatcag cggctaagaa ataacattca ccatgttgcg tcaccagtaa atccgcgctg
     5401 agtttatgac gtaaacgacg aattaacaca tcgacggtgc gcaggtcagg gttttccacc
     5461 cgacgcgcag aaagcatacg tagcagacgt tcacggctga gaatttcgcc cggattcgtc
     5521 acaaatgcca ccaacatttc atactctgcg cgggtcagtt taatcggctc gccatcccgc
     5581 tccagcgtat ggcgcgacac attcaggcaa taaccggcaa agcgatagca gttgtcctga
     5641 gtgtgcggtt gagcttgtcg cgcgaggtcg attcgccaga gcagattttt cacccgtact
     5701 accagttcgc gcagttccag cggtttggtg acgtaatcgt ctgcgcccat ttccagccca
     5761 acaatacggt caatccgatc gctgcgtccg gtaaccagaa taatccccac cgttgagcgt
     5821 tctcgcaggg cgcgggttaa catcaggcca ttttcatcgg gtaagttgat atccagcaga
     5881 attaaatcta ccggctgagt ctgcataatt tcccgcagcc cggcaccgct cgctgtaacg
     5941 gaaacggtat acccctcctg agtgaagtaa gattgtaatc gcgcctgggt aaccggctca
     6001 tcttcaacaa taacaatgtg atgtggcatc agagggtttt actcattctg ttcatattct
     6061 gccgtaagcc gttcatcctg accagtgccg ctgttcatat ttgctcatta agatcgcttc
     6121 actaaaccat aattttacag gggctattat gcggaaactc tggaacgcgc tacgccgacc
     6181 cagtgctcgt tggtcggtac tggcgctggt cgcaattggg attgtgattg gcattgcgct
     6241 gattgtattg ccacacgttg ggatcaaagt caccagcaca accgaatttt gtgtcagttg
     6301 ccacagtatg caaccggtgt atgaagaata taaacagtcg gtgcatttcc agaacgcctc
     6361 cggcgtgcga gctgaatgcc atgactgtca tatcccgccg gatattccag gcatggtgaa
     6421 gcgcaaactg gaagcgagca atgatatcta ccagaccttt attgctcact ccattgatac
     6481 acctgaaaaa ttcgaagcca aacgcgcgga acttgccgag cgtgaatggg cgcgaatgaa
     6541 agaaaacaac tcggcaacct gccgctcctg ccataactac gatgcgatgg atcatgcgaa
     6601 gcagcatcct gaagcggcac gtcagatgaa ggtggcagcg aaagataatc aatcctgcat
     6661 cgactgtcat aaaggtattg cccaccagtt accggatatg agtagcggct tccgtaagca
     6721 gttcgatgag ctgcgcgcca gtgctaatga cagtggtgac acgctgtact ctattgatat
     6781 taagccaatt tatgcggcga aaggcgataa agaagcctct ggttctctgc tgcctgcttc
     6841 ggaagtgaaa gtccttaaac gtgacggcga ctggctgcaa attgaaatta ccggctggac
     6901 ggaaagcgcc ggacgtcagc gtgtactcac ccaattccca ggtaaacgca tctttgttgc
     6961 ctcgattcgt ggtgatgtgc agcagcaggt aaaaacgctg gagaaaacca ccgttgccga
     7021 caccaatacc gagtggagca agttgcaggc cactgcgtgg atgaagaaag gtgatatggt
     7081 gaacgatatc aaaccgatct gggcttatgc ggattcgttg tacaacggca cctgtaacca
     7141 gtgccacggc gcaccggaaa tctctcactt tgatgctaac ggctggattg gcacgctcaa
     7201 cggcatgatt ggctttacca gtctcgataa acgtgaagaa cgcaccttgt tgaaatatct
     7261 gcaaatgaat gcgtctgaca tcgcaggtaa ggctcacggc gataagaagg aagaaaaata
     7321 atgaacaata acgatctctt tcaggcatca cgtcggcgtt ttctggcaca actcggcggc
     7381 ttaacagtcg ccgggatgct ggggccgtca ttgttaacgc cgcgcagtgc gactgcggcg
     7441 caagcggcgg atgtcatctc gaaagagggc attcttaccg ggtcgcactg gggggctatc
     7501 cgcgcgacgg tgaaggatgg tcgctttgtg gcggcaaaac cgttcgaact ggataaatat
     7561 ccgtcgaaaa tgattgccgg attgccggat tgccggattg ccggattgcc ggattgccgg
     7621 attgccggat tgccggatca cgtacacaac gcggcgcgta ttcgttatcc gatggtacgc
     7681 gtggactggc tgcgtaagcg ccatctcagc gatacctccc agcgcggtga taaccgtttt
     7741 gtgcgcgtga gctgggatga agccctcgac atgttctatg aagaactgga acgcgtgcag
     7801 aaaactcacg ggccgagtgc cttgctgacc gccagtggtt ggcaatcgac ggggatgttc
     7861 cataacgctt cggggatgct ggcgaaagct attgccttgc atggtaatag cgttggtacg
     7921 ggcggagatt actctaccgg tgctgcgcag gtgatcctgc cgcgcgtagt cggttcgatg
     7981 gaagtgtatg aacagcaaac ctcctggctg ctggtattgc agaacagcaa aaccattatg
     8041 ctgtggggct ccgatttgct gaaaaaccag caagcgaact ggtggtgccc ggatcacgat
     8101 gtttatgaat attacgagca actaaaagcg aaagtcgccg ccggtgaaat tgaggtcatc
     8161 agcatcgatc cggttgtcac atccacccat gagtatctgg ggcgcgagca tgtgaagcac
     8221 attgcggtta acccgcaaac tgacgtgccg ctgcaactgg cgctggcgta tacgctgtac
     8281 agtgaaaacc tgtacgacaa aaactttctc gctaactact gtgtaggttt tgagcagttc
     8341 ctgccgtatc tgctgggtga gaaagacggt cagccgaaag atgccgcatg ggctgaaaaa
     8401 ctgaccggca ttgatgccga aaccattcgt gggctggcgc ggcagatggc ggcgaacaga
     8461 acgcaaatta ttgctggctg gtgcgtgcag cgtatgcagc acggtgaaca gtgggcgtgg
     8521 atgattgtgg ttctggcggc gatgctgggg caaattggcc tgccaggtgg tggttttggt
     8581 tttggctggc actacaacgg cgcaggcacg ccggggcgta aaggcgttat tctgagtggt
     8641 ttctccggct ctacgtcgat tccgcctgtt cacgacaaca gtgactacaa aggctacagc
     8701 agcaccattc cgattgcccg ttttatcgat gcgatcctcg aaccggggaa agtgatcaac
     8761 tggaacggta aatcggtaaa actgccgcca ctgaaaatgt gtatttttgc cggaactaac
     8821 ccattccatc gccatcagca gatcaaccgc attatttaag gctggcgcaa gctggaaacg
     8881 gttatcgcca tagataacca gtggacctca acctgccgct ttgccgatat cgtactgcct
     8941 gcgaccacgc agtttgagcg taacgatctc gaccagtacg gcaaccactc caaccgtggc
     9001 attatcgcca tgaaacaggt ggtgccgccg cagttcgagg cgcgcaacga ctttgatatt
     9061 ttccgcgagc tgtgccgtcg ctttaatcgc gaagaagcct ttaccgaagg gctggacgaa
     9121 atgggctggc tgaaacgcat ctggcaggaa ggtgtacaac aaggcaaagg acgcggcgtt
     9181 catctgccag cgtttgatga cttctggaat aacaaagagt acgtcgagtt tgaccatccg
     9241 cagatgtttg ttcgccacca ggcattccgc gaagatccgg atctcgaacc gctgggcacg
     9301 ccgagtggcc tgattgagat ctactcgaaa accatcgccg atatgaacta cgacgattgt
     9361 caggggcatc cgatgtggtt tgagaaaatc gaacgctccc acggtgggcc cggctcgcag
     9421 aagtatccgt tgcatctgca atctgtgcat ccggatttcc gacttcactc gcagttatgt
     9481 gagtcggaaa ctctgcgtca gcaatatacg gtagcgggta aagagccagt attcattaac
     9541 ccgcaggatg ccagcgcgcg cggtattcgt aacggtgatg tggtacgcgt ctttaacgct
     9601 cgcggtcagg tgttggcagg ggcagtagtt tctgaccgct atgcacccgg cgtggcacga
     9661 attcacgaag gggcatggta cgatccagat aaaggcggcg agcctggtgc gctgtgcaaa
     9721 tacggtaacc ccaacgtgct gaccatcgac atcggtactt cgcagctggc gcaggcgacc
     9781 agtgcgcaca ctacgctggt ggaaattgag aagtacaatg gagcagtgga gcaggtgacg
     9841 gcgtttaacg gccctgtgga gatagtggcg cagtgcgaat atgttcccgc gtcgcaggtg
     9901 aaatcatgac cacgctgaca gcacaacaga ttgcctgtgt ttacgcctgg ctggcgcagt
     9961 tgttctcccg tgaactggac gatgaacaac tgacgcaaat cgccagtgcg cagatggcgg
    10021 aatggttttc gttgctgaaa agcgaaccgc cgctggctgc ggcggtgaat gagctggaaa
    10081 actgtattgc cacgctgaca gtacgtgacg atgcccgtct ggaactggcc gctgactttt
    10141 gcggcctgtt tttgatgact gataagcagg cggcgctgcc gtatgcatcg gcctacaaac
    10201 aggacgagca agagattaaa cgcttgttag ttgaggccgg gatggaaacc agcggcaatt
    10261 tcaacgaacc ggcagaccat ctggcgatct atctcgagtt gttgagtcat ctgcattttt
    10321 cgctgggaga ggggaccgtt cctgcgcgaa gaatcgacag tttgcggcaa aaaacactga
    10381 cggcgctgtg gcaatggtta ccagagtttg ctgcgcgttg ccatcagtat gacagctttg
    10441 gtttttacgc ggcactaagc cagttattgc tggtgttagt ggagtgcgac caccaaaaca
    10501 aataacgtcg tttatgcgcc tgaaaagacg cgtttagcgt cgcatcaggc attatggcgc
    10561 agttgccgga tgcgtcatca catccggcaa acacacatca cggatgagct acaaaccggg
    10621 aaagccgctg gcgtagcagg cggttttcct gcttcaggtg tgcaatatca tccattaacg
    10681 tcagcgccac cgcgatcccc ggccagtcca gagccagttc atgacgcagg cgtaccgcgc
    10741 gttgcaccac aatggcggca tggtcgtcaa atacccaggt tgtttcctgg atctcacgcg
    10801 gttcaaccac ccccaaaccg acaatttcat tcaactcctc ttcagagatg ccggtatgca
    10861 ggcaaaattc ggtaatagta aaagtcaccg taacattagc catcatgctt tcccccaatc
    10921 tttacgtgga tcaaaagacg actgggcgtc tgccagttgc tgccacagcg cggcagtgtt
    10981 ttcatccggt ttcggcggca tcacgatttt cagtaccgca tacagatcgc cggtctgttt
    11041 tttgctcacc agacctttgc ctttaacgcg caatcgttgc ccggcctggc tgcctggcgg
    11101 gatagtcagc aaaatgcttt ctttcagtgt tggaacggtg actttagcac ccagcgccgc
    11161 ttcccacggg ctaaccggca ccacaatttc cagatcctgg ccgacaatat cgaacagcgg
    11221 atgtggcgca atatgaatca ccagccacaa atcgccattt ggaccaccgt tttcgcccgg
    11281 cgtcccctgg cctttcagac ggatgcgttg accattgccg acgcccgccg ggatcttcac
    11341 attcagcgtt ttcgggattt cctgttcgat catgccaaag gcgttataaa ccggcaggtt
    11401 atagctgatg gtacgcttat gctcagtcag cgtttcttcg aggaataccg ccacttcgat
    11461 ttcaatatcg tggccgcgtg cggcggggcg ttgacggctc tggcgggcat gctgaccgaa
    11521 aattgacgag aagatatcgt caaaatcttc ggcattaaaa ctctgaccgt cgccatgatg
    11581 gaactgacgg ttaaattgcg gatcgttgcg atgttgccac atctgatcat actcagcgcg
    11641 acgttgttca tcacttaaca cttcccaggc ttcagcgacc tctttgaagc gggcttcggc
    11701 atccggttct ttgctgacat caggatggta tttacgggcc agtcgacgat aggcggtctt
    11761 gattgtcttg agatcgtccg tcggtttcac gcccatgatg gcgtaataat cctttaattc
    11821 catagcgtta tctcgcgtaa atcaacacaa attgaaggaa cccctgtaag gtaactccta
    11881 taagtgtagg gtaatcctca aaatttcata tgccaacaca gaatatgtta ttgaaatcat
    11941 cgtggagagg aggtcgccat caatatgggt tgctgaacat attttaaaca ggtgaaaaag
    12001 ggtgagcgat ttttgatagt tgaaccaggc actttaagtt taactagggc gtcattattt
    12061 attaaat
//
LOCUS       DADKRT010000130        11964 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.131, whole genome shotgun sequence.
ACCESSION   DADKRT010000130 DADKRT010000000
VERSION     DADKRT010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11964
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.131"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..410)
                     /locus_tag="JQ356_003008"
     CDS             complement(<1..410)
                     /locus_tag="JQ356_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY4623032.1"
                     /translation="MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTA
                     LALFDLLKPNYVLTTQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVV
                     VVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSV"
     gene            566..1606
                     /gene="gpr"
                     /locus_tag="JQ356_003009"
     CDS             566..1606
                     /gene="gpr"
                     /locus_tag="JQ356_003009"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HAY4623033.1"
                     /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
                     QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
                     WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
                     KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
                     CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
                     RGQSMAQMALSWLLKDDRVTSVLIGVSRAEQLEENVQALNNLTFSTEELAQIDQHIAD
                     GELNLWQASSDK"
     gene            complement(1646..2140)
                     /locus_tag="JQ356_003010"
     CDS             complement(1646..2140)
                     /locus_tag="JQ356_003010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HAY4623034.1"
                     /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN
                     IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            2331..3215
                     /gene="yghA"
                     /locus_tag="JQ356_003011"
     CDS             2331..3215
                     /gene="yghA"
                     /locus_tag="JQ356_003011"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY4623035.1"
                     /translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGS
                     GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
                     VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
                     VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA
                     EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(3487..3912)
                     /gene="exbD"
                     /locus_tag="JQ356_003012"
     CDS             complement(3487..3912)
                     /gene="exbD"
                     /locus_tag="JQ356_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HAY4623036.1"
                     /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI
                     FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
     gene            complement(3919..4653)
                     /gene="exbB"
                     /locus_tag="JQ356_003013"
     CDS             complement(3919..4653)
                     /gene="exbB"
                     /locus_tag="JQ356_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY4623037.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLFNEAQNELELSEGSD
                     DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
                     LQSRDLDLEASAAAHPVRVAQKLRAG"
     gene            4905..6092
                     /gene="metC"
                     /locus_tag="JQ356_003014"
     CDS             4905..6092
                     /gene="metC"
                     /locus_tag="JQ356_003014"
                     /EC_number="4.4.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HAY4623038.1"
                     /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFESMEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGD
                     HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
                     MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
                     MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW
                     LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLSNEELANYLDNFSLF
                     SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA
                     RIV"
     gene            6232..6891
                     /locus_tag="JQ356_003015"
     CDS             6232..6891
                     /locus_tag="JQ356_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY4623039.1"
                     /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGW
                     LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
                     GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGMLFVVIKKKYCN
                     A"
     gene            complement(6931..7830)
                     /locus_tag="JQ356_003016"
     CDS             complement(6931..7830)
                     /locus_tag="JQ356_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003024513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY4623040.1"
                     /translation="MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTP
                     VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN
                     VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG
                     KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN
                     MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRAMQGN"
     gene            8024..9187
                     /gene="yqhD"
                     /locus_tag="JQ356_003017"
     CDS             8024..9187
                     /gene="yqhD"
                     /locus_tag="JQ356_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HAY4623041.1"
                     /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT
                     GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK
                     FIAAADNYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK
                     QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE
                     GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM
                     HGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF
                     EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR"
     gene            9292..10119
                     /gene="dkgA"
                     /locus_tag="JQ356_003018"
     CDS             9292..10119
                     /gene="dkgA"
                     /locus_tag="JQ356_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgA"
                     /protein_id="HAY4623042.1"
                     /translation="MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRS
                     IDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYID
                     LYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ
                     IELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVI
                     RWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG"
     gene            10319..11245
                     /locus_tag="JQ356_003019"
     CDS             10319..11245
                     /locus_tag="JQ356_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708829.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjP/YqhG family protein"
                     /protein_id="HAY4623043.1"
                     /translation="MKIILLFLAALASFTVHAQPPSQTVEQTVRQIYQNYKSDASTPY
                     FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD
                     ADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA
                     ALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM
                     QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR
                     REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ"
     gene            11296..11553
                     /gene="yqhH"
                     /locus_tag="JQ356_003020"
     CDS             11296..11553
                     /gene="yqhH"
                     /locus_tag="JQ356_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YqhH"
                     /protein_id="HAY4623044.1"
                     /translation="MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE
                     QDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE"
     gene            complement(11588..11896)
                     /locus_tag="JQ356_003021"
     CDS             complement(11588..11896)
                     /locus_tag="JQ356_003021"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623045.1"
                     /translation="MDYFCRNESVIDTATQKIIIQPGCHFARSSAHITSQIETEFIGY
                     WYIVITGQWLVQTFYRFINRFFAQHVSAEATEQQNKKTGVPASHNHVLMFGFFLANSL
                     "
BASE COUNT         3094 a         3041 c         2983 g         2846 t
ORIGIN      
        1 acggaactta agccgtcagg tgccagggcg atataccccg ccttcgtcac tcgccgtgcc
       61 acatcttcga tatacggatt cagtccacga ttctcatgca ccaccaccac ggctggcgtt
      121 ttgccgctca tttttgcggg tttcaccaga taaccccgta cctcgccgtg accatttggc
      181 gaaggatacg tgatgtactc agcaacaatc tccgggtcgg taaactctac ctgagtcgtc
      241 agcacataat ttggcttgag caaatcaaac aacgctaatg ccgtcatccc gcccaccgca
      301 tacttcgccg caaggttgag gaactcacgt ttcgaaattt tcccgtgagc gtaatagtcg
      361 tagtaatcca acaactcttg tgggaaatct ttggcggtta aacgcggcat cgttgcattc
      421 ctcaactggt gttttttaag caaagcataa gcgcgtgttt ttgcccagtt tttcgtcact
      481 ctgtgagcca gactacggga tacgcgctgg cgaatcgcta aactagaaac attgtttcga
      541 aattgaacgg tggaaaggag aggtcatggt ctggttagcg aatcccgaac gttacgggca
      601 gatgcagtac cgctattgcg gaaaaagtgg tttacgcctg cccgcgttat cgctcggttt
      661 atggcacaat ttcggtcacg ttaacgcgct ggaatcacag cgtgcaatcc tgcgtaaagc
      721 gtttgattta ggcattacgc actttgattt agccaacaat tacgggccgc ctccaggaag
      781 cgcagaagag aactttggtc gcctgctgcg ggaggatttt gccgcttatc gcgatgaact
      841 gattatctct accaaggctg gctacgatat gtggcccggc ccttacggct ctggcggttc
      901 acgtaaatac ctgctcgcca gcctcgacca aagcctgaag cgtatggggc ttgagtatgt
      961 cgatatcttt tactctcatc gcgtcgatga aaatacgccg atggaagaaa ccgcctctgc
     1021 gctggctcat gcggtacaaa gcggtaaggc gctgtatgtc gggatctcct cttactcgcc
     1081 agagcggacg caaaaaatgg tcgagttgct gcacgagtgg aaaattccgc ttttaattca
     1141 tcaaccttcg tacaatttac tgaaccgctg ggtggataaa agcggcctgc tggataccct
     1201 gcaaaataac ggcgtgggct gtattgcctt tactcctctg gctcagggat tgctgaccgg
     1261 aaaatatctc aacggcattc cgcaagattc acggatgcat cgtgaaggga ataaagttcg
     1321 tggtctgacg ccgaaaatgc ttaccgaagc caacctcaac agcctgcgct tattgaatga
     1381 aatggcacag cagcgtggac aatcaatggc gcaaatggcg ttaagctggt tgctgaaaga
     1441 tgatcgcgtg acgtcggtat tgattggtgt cagccgcgcg gagcaactag aggagaacgt
     1501 gcaggcgctg aataatctga catttagcac cgaggagctg gcgcagattg atcagcatat
     1561 cgccgatggc gagctgaatc tgtggcaggc gtcttccgat aaatgacctg ttaataacgg
     1621 gcgcgcgaac cgcgcccgaa tcagatcagt gattatgacg agtcagtcgg tcaagatagc
     1681 ccatcacaaa tgcagagagc acaaacgtca gatggataat gacgtaccac atcagtttgt
     1741 tatccgggac atttttcgca tccataaaga cgcgcagtaa gtgaatggaa gaaattgcca
     1801 caatcgacgc tgctactttg tttttcagcg acgttgcgtc cattttcccc agccagttca
     1861 gcttctcttt gttctcggag atatccagct gcgagacgaa attctcataa ccggaaaaca
     1921 tcaccatcac cagcaaaccg ccaaccagcg tcatatccac cagcgacagc aacacgagga
     1981 tcaaatctga ttccgccatc gagaagatat tcggcagtac gtgaataatc tcctggaaga
     2041 acttcagcgc cagggcaact aacgccagcg aaaggccaaa gtacacgggg gcaagcagcc
     2101 agcgagaagc atacattgca ttttcaagaa aacgttccat acattcctgt cgtgtagtta
     2161 aaacgggcaa cagtatatcg caattgagta aacagcacgc aacagcaaat caacatatac
     2221 gttaaacctt tgtcgcataa ttctgaggtt tagggatctt cctggttccc ttatcaacgc
     2281 atcgagagcg tctaccctta aaagacgttg aacctgaagg gagaaaaaca atgtctcatt
     2341 taaaagaccc gactacgcag tattacactg gtgaatatcc caaacagaaa caaccgacgc
     2401 caggcatcca ggcgaagatg acaccggtac cggattgcgg cgagaaaacc tatgttggta
     2461 gcggtcgcct gaaagatcgt aaagcactgg tgacaggggg cgattccgga ataggtcgcg
     2521 ctgccgccat cgcttacgcg cgtgaagggg ctgacgtggc gatcagttat cttcccgtgg
     2581 aagaagaaga cgctcaggat gtgaaaaaga tcattgaaga atgcggacgc aaagccgttc
     2641 tgctgccagg cgatttaagc gatgagaaat tcgcccgttc gctggttcac gaagcgcaca
     2701 aggcgttagg cgggctggat attatggcgc tggtcgccgg gaaacaggtt gccattccgg
     2761 atattgcaga cctcaccagc gaacagtttc aaaagacctt tgccattaac gttttcgcgc
     2821 tgttctggct aacccaggaa gcgatccccc tgctaccgaa aggtgcaagt atcatcacca
     2881 cttcgtcaat ccaggcatac cagccaagtc cgcatttact ggactatgcg gctacgaagg
     2941 cggcgattct gaactacagc cgtggcctgg caaaacaggt cgcggagaaa ggtattcggg
     3001 tgaatattgt cgcgccaggc cctatctgga cggcactgca aatttccggc ggacaaacgc
     3061 aggataagat cccgcagttt ggtcagcaaa cgccgatgaa gcgtgcgggg caaccggcgg
     3121 aactggcccc tgtatatgtt tatctggcaa gtcaggagtc gagctacgtc accgcagaag
     3181 tgcacggtgt gtgcggcggc gagcatttag gttaaaaaaa tgcccggttg tgaaaagcaa
     3241 ccgggcatca ttgtgaattc actcttacct gatgtggcga aaacgcctta tccgcctaca
     3301 aacgcatgaa gattcaacat gttgcaatag attttgtagg cctgataagc gtagcgcatc
     3361 aggcattgag cacctaatgc cggatgcggc gtgaacgcct tatccggcct acaaacgcac
     3421 gaagattcaa catgttgcaa tagattttgt aggcctgatg agcgtagcgc atcaggcaat
     3481 tctactttac ttcgctttgg cggtttcttc gccgaccaga cctatcttca ggtaacccgc
     3541 ctgatgcagc gtatccatta ccttcatcaa cgtctcgtaa tcgacggttt tatccgctcg
     3601 gaagaagatg gtggtgtctt tcttgccttc ggttaacgca ttcaacgccg taatcattgt
     3661 ttcatcggtg accggatcgt taccgataaa catcgagttg tctgccttca ccgacagata
     3721 aaccggtttt tccgggcgcg gctgcggcgt gctggtagaa gcaggcaagt tcaccttcac
     3781 atctaccgtc gctaacggtg ccgccaccat aaagataatc agcagaacca acatcacgtc
     3841 gataaacggc gtcacgttga tatcatgcat ttcgccgtta tcgtcgaggt tttcgttaag
     3901 atgcattgcc atcggatatt atcctgcgcg taatttttgt gcgacacgaa ccggatgcgc
     3961 agcggcgctg gcttccagat ccaggtcacg gctttgcagc aacaatacct gcgctgcaac
     4021 atcacccagc atcgctttaa agccgccaat ctggcgtgca aatacgttat agataacgac
     4081 cgcaggaatc gctgccacga ggccgattgc cgttgctaac agagcttctg cgatacccgg
     4141 cgcaacgact gccaggttag tggtctgcgt ttgcgcgata ccaataaagc tgttcatgat
     4201 gccccagacc gtaccaaaca gaccaacgaa cggagaaatc gcgccgatgg ttgccagata
     4261 gccgttaccg cggcccattt gacgacccac tgcggcgacc cgacgctcca gacggaagct
     4321 ggtacgttct ttaatacctt cgttatcgtc gctgccttct gacagttcca gctcattctg
     4381 cgcttcattg aacaaatgca ggcttaagct tttgctacca aaatcagcgg cgatatcgtt
     4441 ggcctggttt aaggaacgcg cttcagccag cagttgctgc tcgcgcttta ggcgacgctt
     4501 ctgattgaag aactctacgc tcttactgaa gaagattgcc caggtgacta cggaggccaa
     4561 aataagccca atcatcacgc acttaacgac aatatcggcg tgctgataca taccccagac
     4621 ggaaaggtct gtctgcatta aattattacc cactgtgtat ctccaggacg caagtcacaa
     4681 aatctgcgca taataatatc aaaacgacgt cgaattgata gtcattctca ttactatttg
     4741 catactgccg tacctttgct ttcttttcct tgcgtttacg cagtaaaaaa gtcaccagca
     4801 cgccatttgc gaaaattttc tgctttatgc caattcttca ggatgcgccc gcgaatattc
     4861 atgctagttt agacatccag acgtataaaa acaggaatcc cgacatggcg gacaaaaagc
     4921 ttgatactca actggtgaat gcaggacgca gcaaaaaata cactcttggc gcggtaaata
     4981 gcgtgattca gcgcgcttct tcgctggtat ttgagagtat ggaagccaaa aagcacgcga
     5041 cgcgcaatcg cgccaatggc gagttgttct atggacggcg cggaacgtta acccattttt
     5101 ccttacaaca agcgatgtgt gaactggaag gtggcgcagg ctgcgcgcta tttccctgcg
     5161 gggcggcagc ggttgctaat tcgattcttg cttttgtcga acagggcgat catgtgttga
     5221 tgaccaacac tgcctatgaa ccgagtcagg atttctgtag caaaatcctc agcaaactgg
     5281 gcgtaacgac atcgtggttt gatccgctga ttggtgccga tatcgttaag catctgcagc
     5341 caaacactaa aatcgtgttt ctggaatcgc caggctccat caccatggaa gtccacgacg
     5401 ttccggcgat tgttgccgcc gtacgcagtg tggtgccgga tgccatcatt atgatcgaca
     5461 acacctgggc agccggtgtg ctgtttaagg cactggattt tggcatcgat gtttctattc
     5521 aagccgccac caaatatctg gttgggcatt cagatgcgat gattggcact gccgtgtgca
     5581 atgcccgttg ctgggagcag ctacgggaaa acgcctatct gatgggccag atggtcgatg
     5641 ccgataccgc ctatataacc agccgtggcc tgcgcacatt aggtgtgcgt ttgcgtcaac
     5701 atcatgaaag cagtctgaaa gtggctgaat ggctggcaga acatccgcaa gtagcgcgag
     5761 ttaaccaccc tgctctgcct ggcagtaaag gacacgaatt ctggaaacga gactttacag
     5821 gtagcagcgg gctgttttcc tttgtgctta agaaaaaact cagtaatgaa gagctggcga
     5881 actatctgga taacttcagt ttattcagca tggcctactc gtggggcggg tatgaatcgt
     5941 tgatcctggc gaatcaacca gaacatatcg ccgccattcg cccacaaggc gagatcgatt
     6001 ttagcgggac cttgattcgc ctgcatattg gtctggaaga tgtcgacgat ctgattgccg
     6061 atctggacgc cggttttgcg cgaattgtat aacattgcca cttttggaca attttgcaga
     6121 catttaattg tgaaaagtct taaattgttg cgtccgggat caaggcgtcc cggacgaatc
     6181 aggagtacaa taggcagata aaggcttaaa cgctgttcca caggaaagtc catggctgtt
     6241 attcaagata tcatcgctgc gctctggcaa cacgactttg ccgcgctggc ggatcctcat
     6301 attgttagcg ttgtttactt tgtcatgttt gccacgctgt ttttagaaaa cggcctgctg
     6361 cccgcctcat ttttgccagg cgacagcttg ttgatactgg caggcgcatt gattgcccag
     6421 ggggttatgg attttctgcc tacgattgcg attctgaccg ccgcagcaag tctgggctgc
     6481 tggctaagtt atattcaggg gcgctggtta gggaatacca aaacggtgaa aggctggctg
     6541 gcacagcttc ctgctaaata tcaccagcgc gccacctgca tgtttgaccg ccacggtctg
     6601 ctggcgctgc tggctggacg ttttcttgca tttgtccgta cgctgctgcc aaccatggcg
     6661 ggaatttccg gtctgccaaa ccgccgcttc cagtttttca actggttaag tggattgctg
     6721 tgggtcagcg tggtaaccag ttttggctat gccttaagta tgattccgtt cgttaaacgc
     6781 catgaagatc aggtaatgac gttcctgatg atcctgccaa ttgccttgtt aaccgctggc
     6841 ttgttaggca tgctgtttgt ggtgattaaa aaaaaatact gtaacgcctg acgattttcc
     6901 ccgttcccgg ctgctgtacc gggaacgtat ttaattcccc tgcatcgccc gcattcttgc
     6961 cgcatcttcc cccggcgtca caccgaagta acgtttaaac tcacggctaa attgcgatgc
     7021 gctttcatag ccgacgcgca tcgctgctgc gctggccttc atgccgtcat ggatgatcat
     7081 catccgcgcc ttatgcagac ggtaattctt caaatactgc aacggcgagg tgctggtgac
     7141 agacttaaaa ttatggtgga acgccgatac gctcatgttg gcttctgccg ccagttgctc
     7201 gacgctcagg ttttcggtgt atttattctc aatccgtttc agcacgcggc taatcagact
     7261 gaagtgagtc tggcgactga ccagcgccag taacgcgccg ccgcaaggtc cggtcagcac
     7321 gtagtacaga atttcgcgga tgatctgttt gccgagaata cgcgcatcca gtggtcgctc
     7381 catcacgtcg agtaaccgct ccgccgcgca taaaatctct tctgataacg tggcggagtt
     7441 aatcccgctg gctgccatcg acggctggaa atgctcatct tcgccaatgt ccatcaacag
     7501 ttcctgtaac tgcaaaatat cgacattgag acgcaaccct gccagcggca cctctgacgt
     7561 ggcataggtt tcgcactcaa acggcaacgg caccgtcagc agcaggtatt cattggcatc
     7621 ataacgaaac acgcgttcat tgatataacc gattttatgc ccggaaaaga gaattatgat
     7681 gccaggctcg tacatcaccg gtgtacgtgc gaaaggcgtc tcaccataca acaaacgcac
     7741 atcgggcaac agttctgaca aactattttc tttatttttc agtttattaa ctttatccgc
     7801 cagcaagcgg caaatctctt cacgtttcat atcgcgtaat ttcttaggaa taatgcggca
     7861 atttgattgt gcgcaatttt gtagcatttc tccagcactc tggagaaata ggcaagacat
     7921 tggcagaaat gagcattgag agccagggcg ctggcgatca caatgaaaaa catcaggcag
     7981 atcgttctct gccctcatat tggcccagca aagggagcaa gtaatgaaca actttaatct
     8041 gcacacccca acccgcattc tgtttggtaa aggcgcaatc gctggtttac gcgaacaaat
     8101 tcctcacgat gctcgcgtat tgattaccta cggtggcggc agcgtgaaaa aaaccggcgt
     8161 tctcgatcaa gttctggatg ccctgaaagg catggacgtg ctggaatttg gcggtattga
     8221 gccaaacccg gcttatgaaa cgctgatgaa cgccgtgaaa ctggttcgcg aacagaaagt
     8281 gactttcctg ctggcggttg gcggcggttc tgtactggac ggcaccaaat ttatcgccgc
     8341 agcggataac tatccggaaa atatcgatcc gtggcacatt ctgcaaacgg gcggtaaaga
     8401 gattaaaagc gccatcccga tgggctgtgt gctgacgctg ccagcaaccg gttcagaatc
     8461 caacgcaggc gcggtgatct cccgtaaaac cactggcgac aagcaggcgt tccattctgc
     8521 ccatgttcag ccggtatttg ccgtgctcga tccggtttat acctacaccc tgccgccgcg
     8581 tcaggtggct aacggcgtag tggacgcctt tgtacacacc gtggaacagt atgttaccaa
     8641 accggttgat gccaaaattc aggaccgttt cgcagaaggc attttgctga cgctgatcga
     8701 agatggtccg aaagccctga aagagccaga aaactacgat gtgcgcgcca acgtcatgtg
     8761 ggcggcgacg caggcgctga acggtttgat tggcgctggc gtaccgcagg actgggcaac
     8821 gcatatgctg ggccacgaac tgactgcgat gcacggtctg gatcacgcgc aaacactggc
     8881 tatcgtcctg cctgcactgt ggaatgaaaa acgcgatacc aagcgcgcta agctgctgca
     8941 atatgctgaa cgcgtctgga acatcactga aggttccgac gatgagcgta ttgacgccgc
     9001 gattgccgca acccgcaatt tctttgagca attaggcgtg ccgacccacc tctccgacta
     9061 cggtctggac ggcagctcca tcccggcttt gctgaaaaaa ctggaagagc acggcatgac
     9121 ccaactgggc gaaaatcatg acattacgtt ggatgtcagc cgccgtatat acgaagccgc
     9181 ccgctaagct ttttacgcct caaactttcg ttttcgggca tttcgtccag acttaagttc
     9241 acaacacctc accggagcct gctccggtga gttcatataa aggaggaacg tatggctaat
     9301 ccaaccgtta ttaagctaca ggatggcaat gtcatgcccc agctgggact gggcgtctgg
     9361 caagcaagta atgaggaagt aatcaccgcc attcaaaaag cgttagaagt gggttatcgc
     9421 tcgattgata ccgccgcggc ctacaagaac gaagaaggtg tcggcaaagc cctgaaaaat
     9481 gcctcagtca acagagaaga actgttcatc accactaagc tgtggaacga cgaccacaag
     9541 cgcccccgcg aagccctgct cgacagcctg aaaaaactcc agcttgatta tatcgacctc
     9601 tacttaatgc actggcccgt tcccgctatc gaccattatg tcgaagcatg gaaaggcatg
     9661 atcgaattgc aaaaagaggg attaatcaaa agcatcggcg tgtgcaactt ccagatccat
     9721 cacctgcaac gcctgattga tgaaactggc gtgacgcctg tgataaacca gatcgaactt
     9781 catccgctga tgcaacaacg ccagctacac gcctggaacg cgacacacaa aatccagacc
     9841 gaatcctgga gcccattagc gcaaggaggg aaaggcgttt tcgatcagaa agtcattcgc
     9901 gatctggcag ataaatacgg caaaaccccg gcgcagattg ttatccgctg gcatctggat
     9961 agcggcctgg tggtgatccc gaaatcggtc acaccttcac gtattgccga aaactttgat
    10021 gtctgggatt tccgtctcga caaagacgaa ctcggcgaaa ttgcaaaact cgatcagggc
    10081 aagcgtctcg gtcccgatcc tgaccagttc ggcggctaac atgcaaattc tcccggtggc
    10141 ggtaatgttc cgctaccgga cttttcagaa atcatttatt cccctcgcgt cccgcccgtt
    10201 gttactcttc cttgttcagg aatgccaaat ataaggacat catcatgcag agccggaagc
    10261 tcttaaaaga acaactcatc tatatccggg ataaacgcaa cggagaggtg aaaaacagat
    10321 gaaaataata cttctgtttt tagcagccct ggcaagtttt accgtacacg cgcagcctcc
    10381 ttcacagacc gtagaacaaa cagtccggca gatttatcag aactataaat cagatgccag
    10441 tacgccttat ttcggtgaaa ccggagagcg ggcgataact tcagcgcgta ttcaacaggc
    10501 gcttaccctg aacgacaatc ttacgctgcc gggcaatatt ggctggctgg attatgatcc
    10561 ggtttgtgat tgtcaggatt ttggcgatct ggtgctagaa agcgttgcga taacccaaac
    10621 tgacgccgat catgccgatg ccgttgtgcg ctttcgtatc tttaaagatg ataaagaaaa
    10681 gaccacgcag acactgaaaa tggtggcgga aaatggtcgt tgggtcattg acgatattgt
    10741 cagcaatcat ggcagtgtct tacaagcagt taatagcgag aatgaaaaaa cgctggccgc
    10801 tttagcttcg ttgcaaaaag aacagccgga agcctttgtt gccgaactct ttgaacatat
    10861 tgctgattat agctggccgt ggacgtgggt ggtttccgac tcttaccgcc aggcggttaa
    10921 tgccttctat aaaaccacct tcaagacggc caataatccc gatgaagata tgcaaataga
    10981 acggcaattt atttacgaca atccgatctg ttttggcgaa gagtcgctat tttcacgcgt
    11041 tgatgaaatt cgagtcctgg agaaaaccgc cgattccgcc cgcattcatg ttcgttttac
    11101 gctgaccaat ggcaacaacg aagagcaaga actggtttta cagcggcgcg aaggcaagtg
    11161 ggaaatcgct gattttatcc gcccgaacag cggcagccta cttaagcaga ttgaggcaaa
    11221 aactgccgcc agattaaagc aatgagctga attaaataac aattagccgg aacaataaat
    11281 aaaagggaac actatatgaa aacgattttc accgtgggag ctgttgttct ggcaacctgc
    11341 ttgctcagtg gctgcgtcaa tgagcaaaag gtcaatcagc tggcgagcaa tgtgcaaaca
    11401 ttaaatgcca aaatcgcccg gcttgagcag gatatgaaag cactacgccc acaaatctat
    11461 gctgccaaat ccgaagctaa cagagccaat acgcgtcttg atgcacagga ctattttgat
    11521 tgcctgcgct gcttgcgtat gtacgcagaa tgataaaaaa atccccggca gcatgtcagt
    11581 tgccgggtta taggctgttt gctaaaaaaa agccaaacat aaggacatga ttatgcgacg
    11641 ctggcacacc tgttttttta ttctgctgtt ctgtggcttc agcggaaacg tgttgtgcaa
    11701 agaatcgatt aatgaagcga tagaacgttt gtaccaacca ttgaccagta atgacgatat
    11761 accaataacc gatgaattca gtctcgattt gcgaagtaat atgagcgcta ctcctggcaa
    11821 aatgacaccc tggctgaata ataatctttt gtgtcgctgt gtcgatgacg ctttcgtttc
    11881 tgcagaaata atccaaagca cacacctaaa tggcggccga acgcatgtac tgttgcagct
    11941 ggttatcaaa caaaatcgca caga
//
LOCUS       DADKRT010000131        11926 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.132, whole genome shotgun sequence.
ACCESSION   DADKRT010000131 DADKRT010000000
VERSION     DADKRT010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11926
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.132"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            216..1325
                     /gene="livk"
                     /locus_tag="JQ356_003022"
     CDS             216..1325
                     /gene="livk"
                     /locus_tag="JQ356_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter substrate-binding protein LivK"
                     /protein_id="HAY4623046.1"
                     /translation="MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDM
                     EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK
                     PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENID
                     FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD
                     QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA
                     NTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK"
     gene            1373..2299
                     /gene="livH"
                     /locus_tag="JQ356_003023"
     CDS             1373..2299
                     /gene="livH"
                     /locus_tag="JQ356_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010436488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivH"
                     /protein_id="HAY4623047.1"
                     /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
                     EVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNS
                     KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVI
                     WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
                     AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLS
                     TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
     gene            2296..3573
                     /locus_tag="JQ356_003024"
     CDS             2296..3573
                     /locus_tag="JQ356_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HAY4623048.1"
                     /translation="MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIR
                     WQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVA
                     WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
                     GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
                     PNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSL
                     FVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQ
                     GFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG
                     LMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA"
     gene            3570..4337
                     /gene="livG"
                     /locus_tag="JQ356_003025"
     CDS             3570..4337
                     /gene="livG"
                     /locus_tag="JQ356_003025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivG"
                     /protein_id="HAY4623049.1"
                     /translation="MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGK
                     TTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLL
                     VAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
                     RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
                     GISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA"
     gene            4339..5052
                     /gene="livF"
                     /locus_tag="JQ356_003026"
     CDS             4339..5052
                     /gene="livF"
                     /locus_tag="JQ356_003026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivF"
                     /protein_id="HAY4623050.1"
                     /translation="MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGK
                     TTLLGTLCGDPRAASGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
                     MGGFFAERDQFQERIKWVYELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLL
                     LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLS
                     DTGDALLANEAVRSAYLGG"
     gene            5449..6120
                     /locus_tag="JQ356_003027"
     CDS             5449..6120
                     /locus_tag="JQ356_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000803216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HAY4623051.1"
                     /translation="MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSL
                     AQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIK
                     PVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGL
                     DPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENRHLPGDRRRHVRRAGSGH
                     HDADL"
     gene            6050..6253
                     /locus_tag="JQ356_003028"
                     /pseudo
     CDS             6050..6253
                     /locus_tag="JQ356_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099274.1"
                     /note="with UgpEC is involved in the uptake of
                     glycerol-3-phosphate; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter permease"
     gene            6250..7095
                     /gene="ugpE"
                     /locus_tag="JQ356_003029"
     CDS             6250..7095
                     /gene="ugpE"
                     /locus_tag="JQ356_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HAY4623052.1"
                     /translation="MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAA
                     PMTLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAI
                     VWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATTTF
                     LFRQFFMTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWP
                     LLIITDVDLGTTVAGIKGMIATGEGTTEWNSVMAAMLLTLIPPVVIVLVMQRAFVRGL
                     VDSEK"
     gene            7097..8167
                     /locus_tag="JQ356_003030"
     CDS             7097..8167
                     /locus_tag="JQ356_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate import ATP-binding
                     protein UgpC"
                     /protein_id="HAY4623053.1"
                     /translation="MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKS
                     TLLRMVAGLERVTEGDIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLK
                     IRGMGKQQIAERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDE
                     PLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGT
                     PVEVYEKPASLFVASFIGSPAMNLLTGRVNNEGTHFELDGGIELPLNGGYRQYAGRKM
                     TLGIRPEHIVLSSQAEGGVPLVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGS
                     TLWLHLAENQLHLFDGETGQRV"
     gene            8164..8907
                     /gene="ugpQ"
                     /locus_tag="JQ356_003031"
     CDS             8164..8907
                     /gene="ugpQ"
                     /locus_tag="JQ356_003031"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HAY4623054.1"
                     /translation="MSNWPYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKL
                     SKDGEIFLLHDDNLERTSNGWGVVGELNWQDLLRVDAGSWYSKAFKGEPLPLLSQVAE
                     RCREHGMMANIEIKPTTGTGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQLAA
                     PELPRGLLLDEWRDDWRELTARLGCVSIHLNHKLLDKARVMQLKDAGLRILVYTVNKP
                     QRAAELLRWGVDCICTDAIDVIGPNFTAQ"
     gene            complement(8894..9334)
                     /locus_tag="JQ356_003032"
     CDS             complement(8894..9334)
                     /locus_tag="JQ356_003032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2756 family protein"
                     /protein_id="HAY4623055.1"
                     /translation="MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQ
                     TQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGG
                     MLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP"
     gene            9454..11187
                     /gene="ggt"
                     /locus_tag="JQ356_003033"
     CDS             9454..11187
                     /gene="ggt"
                     /locus_tag="JQ356_003033"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HAY4623056.1"
                     /translation="MIKPTFLRRVAIAALLSGSCFSAVAAPPVSYGVEEDIFHPVRAK
                     QGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKN
                     GNTTAIDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGT
                     MPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKKGDK
                     LVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS
                     GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADR
                     SEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAQPSSEIRPGKLAPYESNQTTHYS
                     VVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANA
                     VGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGMNVAEATNA
                     PRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALKEAMGSTQSIMVGPDGELYGASD
                     PRSVDDLTAGY"
     gene            complement(11225..11509)
                     /locus_tag="JQ356_003034"
                     /pseudo
     CDS             complement(11225..11509)
                     /locus_tag="JQ356_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417903.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11709..11864)
                     /locus_tag="JQ356_003035"
     CDS             complement(11709..11864)
                     /locus_tag="JQ356_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623057.1"
                     /translation="MEKLTTELHSLSEMDRRHVVSILAEIANGYDDFNDMLIYLEFYP
                     NHKILIS"
BASE COUNT         2707 a         2956 c         3387 g         2876 t
ORIGIN      
        1 aaaggcactt ttttctgttt atctatcaat aaattcagaa tattatctgt tcttaatcga
       61 ctgaaagata gggattttaa tcactattat cacaaaatac tgcgctaaac ccttaatcag
      121 acaggcaaaa acagtgcagt ataaaaaaag aacagtctga tttgttaaca cataaaaaca
      181 aagcaacaca acatcacgaa tggggatttt tgactatgaa acggaatgcg aaaactatca
      241 tcgcagggat gattgcactg gcaatttcac acaccgctat ggctgacgat attaaagtcg
      301 ccgttgtcgg cgcgatgtcc ggcccgattg cccagtgggg cgatatggaa tttaacggcg
      361 cgcgtcaggc gattaaagac attaatgcca aagggggaat taagggcgac aagctggttg
      421 gcgtggaata tgacgacgcc tgcgacccga aacaagccgt tgcggtcgcc aacaaaatcg
      481 ttaatgacgg cattaaatac gttattggtc atctgtgttc ttcttctacc caacctgcat
      541 cagatatcta cgaagacgaa ggtattctga tgatctcacc gggagcgacc aacccggagc
      601 tgacccaacg cggttatcaa cacattatgc gtactgccgg gctggactct tcccaggggc
      661 caacggcggc aaaatacatt cttgagacgg tgaagcccca gcgcatcgcc atcattcacg
      721 acaaacaaca gtatggcgaa gggctggcgc gttcggtgca ggacgggctg aaagcggcta
      781 acgccaacgt cgtcttcttc gacggtatta ccgccgggga gaaagatttc tccgcgctga
      841 tcgcccgcct gaaaaaagaa aacatcgact tcgtttacta cggcggttac tacccggaaa
      901 tggggcagat gctgcgccag gcccgttccg ttggcctgaa aactcagttt atggggccgg
      961 aaggtgtggg taacgcatca ttgtcgaata ttgccggtga tgctgccgaa ggcatgttgg
     1021 tcactatgcc aaaacgctat gaccaggatc cggcaaacca gggcatcgtt gatgcgctga
     1081 aagcagacaa gaaagatccg tccgggcctt atgtctggat cacctacgcg gcggtgcaat
     1141 ctctggcgac tgcccttgag cgtactggca gcgatgagcc gctggcgctg gtgaaagatt
     1201 taaaagctaa cggtgcaaac accgtgattg ggccgctgaa ctgggatgaa aaaggcgatc
     1261 ttaagggatt tgattttggt gtcttccagt ggcacgccga cggttcatcc acggcagcca
     1321 agtgatcatc ccaccgcccg taaaatgcgg gcgggtttag aaaggttacc ttatgtctga
     1381 gcagtttttg tatttcttgc agcagatgtt taacggcgtc acgctgggca gtacctacgc
     1441 gctgatagcc atcggctaca ccatggttta cggcattatc ggcatgatca acttcgccca
     1501 cggcgaggtt tatatgattg gcagctacgt ctcatttatg atcatcgccg cgctgatgat
     1561 gatgggcatt gataccggct ggctgctggt ggcggcggga ttcgtcggcg caatcgtcat
     1621 tgccagcgcc tacggctgga gtatcgaacg ggtagcctat cgcccggtgc gtaactctaa
     1681 gcgcctgatt gcgctcatct cggcaatcgg catgtccatc ttcctgcaaa actacgttag
     1741 cctgactgaa ggttcgcgtg acgtggcgct gcccagtctg tttaacggtc agtgggtggt
     1801 ggggcatagc gaaaacttct ctgcctctat taccaccatg caggcagtga tctggattgt
     1861 tactttcctc gccatgctgg cgctgacgat tttcattcgt tattcccgta tggggcgcgc
     1921 ctgccgtgcc tgcgcggaag atctgaaaat ggcgagcctg cttggcatca acaccgaccg
     1981 ggtgattgct ttgacctttg ttattggcgc ggcgatggcg gcagtggctg gcgtactgct
     2041 cggtcagttc tacggcgtca ttaaccccta tatcggcttt atggccggga tgaaagcctt
     2101 taccgctgcg gtgctcggtg ggattggcag cattccaggg gcgatgattg gtgggctgat
     2161 cctggggatt gcggaggcgc tctcttctgc ctatctgagt acggaatata aggatgtggt
     2221 ttcatttgcc ctgctgattc tggtgctgct ggtgatgccg accggtattc tgggtcgccc
     2281 ggaggtagag aaagtatgaa accgatgcat attgcaatgg cgctgctctc tgccgcgatg
     2341 ttttttgtcc tggcgggcgt ctttatgggc gtgcaactgg agctggatgg caccaaactg
     2401 gtggtcgaca cggcttcaga catccgttgg cagtgggtgt ttatcggcac ggcggtggtc
     2461 tttttcttcc agcttttgcg accggctttc cagaaagggc taaaaagcgt ttccggaccg
     2521 aagtttattc tgcccgcgat tgatggctcc acggtgaagc agaaactgtt cctcgtggcg
     2581 ctgttggtgc ttgcggtggc gtggccgttt atggtgtcac gtgggacggt ggatatcgcc
     2641 actctgacca tgatctacat tatcctcggt ctcgggctga atgtggttgt tggtctttct
     2701 ggtctgctgg tgctggggta cggcggtttt tacgccatcg gcgcttacac ctttgcgctg
     2761 ctcaatcact attacggctt gggcttctgg acttgtctgc cgattgccgg gttaatggca
     2821 gcggcggcgg gcttcctgct cggctttccg gtgctgcgtc tgcgcggtga ttatctggcg
     2881 atcgttaccc tcggcttcgg cgaaattgtg cgcatattgc tgctcaataa caccgaaatt
     2941 accggcggcc cgaacggaat cagtcagatc ccgaaaccga ctttcttcgg ccttgagttc
     3001 agccgtaccg cccgtgaagg cggttgggac acgttcagta atttctttgg cctgaaatac
     3061 gatccctccg atcgcgtcat cttcctgtat ctggtggcgt tgctgctggt ggtgctaagc
     3121 ctgtttgtca ttaaccgcct gctgcggatg ccgctggggc gtgcgtggga agcgttgcgt
     3181 gaagatgaga tcgcctgccg ttcgctgggc ttaagcccgc gtcgtatcaa gctgaccgct
     3241 tttaccatca gtgccgcgtt tgccggtttt gccggaacgc tgtttgctgc gcgccagggc
     3301 tttgtcagcc cggaatcctt cacctttgct gaatcggcgt ttgtactggc gatagtggtg
     3361 ctcggcggta tgggatcgca gtttgcggtg attctggcgg caattttgct ggtggtgtcg
     3421 cgcgagttga tgcgtgattt caacgaatac agcatgttaa tgctcggtgg tttgatggtg
     3481 ctgatgatga tctggcgtcc gcagggcttg ctgcccatga cgcgcccgca actgaagctg
     3541 aaaaacggcg cagcgaaagg agagcaggca tgagtcagcc attattatct gtgaacggcc
     3601 tgatgatgcg cttcggcggc ctgctggcgg tgaacaacgt caatcttgaa ctgtacccgc
     3661 aggagatcgt ctcgttaatc ggtcctaacg gtgccggaaa aaccacggtc tttaactgcc
     3721 tgaccggatt ctacaaaccc actggaggca ccattttact gcgcgatcag catctggaag
     3781 gtttaccggg gcagcaaatt gcccgcatgg gcgtggtgcg taccttccag catgtgcgtc
     3841 tgttccgtga aatgacggtg attgaaaacc tgctggtggc gcagcatcag caactgaaaa
     3901 ccgggctgtt ctctggcctg ttgaaaacgc catccttccg tcgcgcccag agcgaagcgc
     3961 tcgatcgcgc cgcgacctgg cttgagcgca ttggtttgct ggaacacgcc aaccgtcagg
     4021 cgagtaacct ggcctatggt gaccagcgcc gtcttgagat tgcccgctgc atggtgacgc
     4081 agccggagat tttaatgctc gacgaacctg cggcaggtct taacccgaaa gagacgaaag
     4141 agctggatga gctgattgcc gaactgcgca atcatcacaa caccactatc ttgttgattg
     4201 aacacgatat gaagctggtg atgggaattt cggaccgaat ttacgtggtc aatcagggga
     4261 cgccactggc aaacggtacg ccggagcaaa tccgtaataa cccggacgtg atccgtgcct
     4321 atttaggtga ggcataagat ggaaaaagtc atgttgtcct ttgacaaagt cagcgcccac
     4381 tacggcaaaa tccaggcact gcatgaggtg agcctgcata tcaatcaggg cgagattgtc
     4441 acgctgattg gcgcgaacgg ggcggggaaa accaccttgc tcggcacgtt atgcggcgat
     4501 ccgcgcgccg ccagcgggcg aattgtgttt gatgataaag acattaccga ctggcagacg
     4561 gcgaaaatca tgcgcgaagc ggtagcgatt gtcccggaag ggcgtcgcgt cttctcgcgg
     4621 atgacggtgg aagagaacct ggcgatgggc ggcttttttg ccgaacgcga ccagttccag
     4681 gagcgcataa agtgggtgta tgaactgttt ccacgtctgc atgagcgccg tgttcagcgg
     4741 gcaggcacca tgtccggcgg tgagcaacaa atgctggcga ttggtcgcgc gctgatgagc
     4801 aacccgcgtt tgctgctact tgatgagcca tcgctcggtc ttgcgccgat tatcatccag
     4861 caaattttcg acaccatcga gcagctgcgc gagcagggga tgactatctt cctcgtcgag
     4921 cagaacgcca accaggcgct aaagctggcg gatcgcggct acgtgctgga aaacggccat
     4981 gtggtgctct ccgataccgg cgatgcgctg ctggcgaacg aagcagtgag aagtgcgtat
     5041 ttaggcgggt aataacacgt tgattgataa ggagtcaaaa gactcctttg agacaggtga
     5101 caaatgtaaa attgcctgat gcgctgcgct tatcaggcct actgggtgag ttgcaatata
     5161 ttgaatttgc acgatcttgt aggccggata aggcgtttac gccgcatccg gcatgaaacg
     5221 atgagtaatc tgtagagttt gattcagacc ttctattttt ccgcttatcc gtgccccatc
     5281 tcccattttc cctcacccac gccgtcaccg ccttgtcatc tttctgacac cttactatct
     5341 tacaaatgta acaaaaaagt tatttttctg taattcgagc atgtcatgtt accccgcgag
     5401 cataaaacgc gtgaattcgc gcattcggta caacaagaga gataaacgat gaaaccgtta
     5461 cattatacag cttcagcact ggcgctcgga ctggcgttaa tggggaatgc acaggcagtg
     5521 acgaccattc cgttctggca ttctatggaa ggggaactgg gtaaagaggt ggattctctg
     5581 gcccaacgtt ttaacgccga aaatccggat tacaaaattg taccgaccta taaaggcaac
     5641 tacgaacaga atttaagcgc ggggattgcc gcatttcgta ccggcaacgc tccggctatt
     5701 ttgcaggttt atgaagttgg caccgccacc atgatggcat cgaaagccat taaaccggta
     5761 tatgacgtgt ttaaagaggc ggggattcaa ttcgatgagt cgcagtttgt gccgacggtt
     5821 tccggttact actccgacag caaaacgggc cacttactct cccagccatt caacagctcg
     5881 actcccgttc tctattacaa caaagacgcc ttcaagaaag cggggttaga cccggaacag
     5941 ccgccgaaaa cctggcagga tctggcggac tatgccgcga aactgaaagc ctccggcatg
     6001 aagtgcggct acgccagcgg ctggcagggc tggatccaac tggaaaatcg acaccttccc
     6061 ggtgatcgac gccgccacgt ccggcgggcc ggttcaggcc accacgacgc tgatttataa
     6121 gatctaccgc gaaggtttta ccggactgga tctggcttcg tctgccgcac agtcggtggt
     6181 gttgatgttc ctcgtcatcg tgctgacggt ggtgcagttc cgctatgttg aaagcaaggt
     6241 gcgttaccaa tgattgagaa ccgtccgtgg ctgacgatat tcagccatac catgctgatc
     6301 ctcgggatcg cggtgattct cttcccgctg tacgtggcgt ttgtcgcggc gacgctggat
     6361 aaacaggccg tctatgccgc gccgatgacg ctcatccccg gcacacatct gctggaaaat
     6421 atccacaaca tctgggttaa cggggtaggt acgaatagcg cgccgttctg gcggatgttg
     6481 cttaacagct ttgtgatggc gttcagcatt acgctcggca aaattaccgt ctcgatgctc
     6541 tcggcatttg ccattgtctg gtttcgtttt ccgctacgta acctcttctt ctggatgatt
     6601 tttatcaccc tgatgctgcc ggttgaagta cgtatcttcc cgacggtgga agtcatcgcc
     6661 aacctgaaga tgctcgacag ctacgccggt ttaacgctgc cgctgatggc ctcggcgacc
     6721 accacgtttc tgtttcgcca gttctttatg acgctgccgg atgaactggt ggaagcggcg
     6781 cggatcgacg gcgcatcgcc aatgcgcttc ttttgcgaca tcgtttttcc gctctccaaa
     6841 actaatctgg cggcgctgtt tgtgatcacc tttatttacg gctggaacca gtatttgtgg
     6901 ccgttgttga ttattaccga cgtggatctc ggcaccaccg tggcagggat caaagggatg
     6961 atcgccactg gcgaaggcac cacggaatgg aactcagtga tggcggcgat gttgttaacc
     7021 ctgatcccac cagtagtgat tgttttagtg atgcagcgtg ccttcgtgcg cggcctggtc
     7081 gatagtgaga aataagatgg caggactgaa attacaggca gtaaccaaaa gctgggatgg
     7141 caaaacccag gtcattaaac cgctgaccct tgatgtggct gatggcgaat ttatcgtgat
     7201 ggtcgggccg tctggctgcg ggaaatcgac gctgctgcgt atggttgccg ggctggagcg
     7261 ggtgaccgaa ggcgatatct ggatcaacga ccagcgcgtg actgaaatgg agccgaaaga
     7321 tcgcgggatt gcgatggtgt tccagaacta cgcgctttat ccgcatatga gcgtcgaaga
     7381 aaacatggcg tgggggctta aaattcgcgg catgggcaag cagcaaattg ccgagcgcgt
     7441 taaagaagcg gcgcgcattc tggagctgga cggtctgctc aaacgtcgcc cgcgtgagct
     7501 atccggcggt cagcgtcagc gtgtagcgat gggccgcgcg attgtgcgcg atccggcggt
     7561 gttcctgttt gatgagccgc tctctaacct cgatgccaag ctgcgcgtgc agatgcgtct
     7621 tgaactgcaa cagttgcacc gtcgcctgaa aacgacttca ctctacgtta ctcacgatca
     7681 ggttgaagcg atgacgctcg cccagcgagt aatggtgatg aacggcggcg ttgccgaaca
     7741 gattggcaca ccagttgaag tctacgaaaa gcccgccagc ctgtttgtag cgagttttat
     7801 cggcagtccg gcgatgaacc tgctgacagg ccgcgtgaat aacgaaggca cgcatttcga
     7861 actggacggc ggtattgagc tgccgctaaa cggtggctac cgtcagtatg ccgggcgtaa
     7921 aatgactctc ggcattcgcc cggaacatat tgtgctaagc tcgcaggcag aaggcggcgt
     7981 accgctggtg atggacacgc tggagatcct cggcgcagat aacctggcgc acggacgctg
     8041 gggcgagcag aagctggtgg tgcgactggc gcatcaggag cgcccgacgg caggcagcac
     8101 gctgtggctg catctggcgg aaaatcagct gcatcttttt gatggtgaaa caggacaacg
     8161 agtatgagta actggcctta tccccgcatc gtcgctcatc gtggcggcgg taagctggcc
     8221 ccggaaaaca ccctggcggc aatcgacgtc ggggcaaaat acggtcataa gatgatcgaa
     8281 tttgacgcga agttatcgaa agatggcgag atcttcctgc tccatgacga caatctcgaa
     8341 cgcaccagca acggctgggg cgtcgtgggt gaactgaact ggcaggattt actgcgcgtg
     8401 gatgcgggca gttggtacag caaagcgttt aaaggtgagc cgctgccgtt gctttcgcag
     8461 gtggcggaac gctgtcgcga acatgggatg atggcgaata tcgaaatcaa acccaccact
     8521 ggcactggac cattaacggg caaaatggtg gcgctggcgg cacgccaact gtgggccggt
     8581 atgacgccgc cgctgctgtc atcgtttgag attgatgctt tagaagctgc acagctggcg
     8641 gcaccggaac tgccgcgtgg tttattgctt gatgagtggc gcgacgactg gcgcgaactg
     8701 accgcgcggc tgggctgcgt ctctattcat ctcaatcata agttactcga taaagcgcga
     8761 gtgatgcagt tgaaagacgc cggattacgg attctggttt ataccgtcaa taaaccccag
     8821 cgcgcggcag agttgctgcg ctggggcgtg gattgcatct gtaccgatgc gattgacgtg
     8881 attggtccga actttacggc ccaatagttt tcaacggaat gtcaggctgc ggcgtgctgg
     8941 gctgattcag catgtcgccg tttctcctct ccggcagcat atgctgctga ttcaacgaac
     9001 tatccggatt acggttgctg tttaacatcc cgccgttggt gttgggcagc atttgctgcc
     9061 gggcgggatt tcgctccccc ggctgtgact gcaacacccg ctgagaatta ttgtttatct
     9121 ggttttctaa atgctgctgt tgcaactgag tttgcgtttt cagttgctga ttcagcatcc
     9181 ctttttgctg gatttgctga gtttgcatct gggtttgcat ccgctgctgg ctgggtatct
     9241 gataccccgg ctggttaggg ttgttcagag tattaatggg ctgtgcaaag ccgacaaacg
     9301 gcaggagtgc cgtaagaatc agaagtcgtt tcatcgcgta tcctcctctg aagatatcct
     9361 ttaagtttac tcgcttcccg acaaaacgat gattaattca gagttatata ccaggcttag
     9421 ctggggttgc cccttaatct ctggagaata acgatgataa aaccgacgtt tttacgccgg
     9481 gtagccattg ctgctctgct ctcaggaagt tgttttagcg ccgtcgccgc gcctcctgtt
     9541 tcttacggcg tggaggaaga tatcttccat ccggtacgcg cgaaacaggg gatggtggcg
     9601 tctgtcgatg ccactgccac ccaagtgggg gtagatattc taaaggaggg cgggaatgcc
     9661 gttgatgccg ccgtggcggt gggctacgcg ctggcggtaa cgcatccgca ggcagggaat
     9721 ctgggcggtg gtggttttat gctgatccgc tcgaaaaatg gcaataccac cgctatcgat
     9781 ttccgcgaga tggcacccgc taaagcgacc cgcgatatgt tccttgatga ccagggcaac
     9841 ccggacagca aaaaatcact cacttcgcat ctggcttccg gcacgcccgg tacggtcgct
     9901 ggtttctcgc tggcgttgga taagtacggc actatgccgt tgaacaaagt ggtgcagccc
     9961 gcgttcaaac tggcacgcga tggttttatc gttaacgatg ctttggcaga cgatctcaaa
    10021 acctacggta gcgaagtgtt gccgaatcac gaaaacagca aagctatctt ctggaaagag
    10081 ggcgaaccgc tgaaaaaggg cgacaagctg gtgcaggcga acctggcaaa gagcctggag
    10141 atgattgccg aaaacggccc ggacgaattc tataaaggca cgatagcgga acagattgcc
    10201 caggagatgc agaaaaacgg tggcttgatc actaaagaag atttagcggc gtataaagcg
    10261 gtcgaacgca caccgataag tggcgattat cgcgggtatc aggtttactc catgccaccg
    10321 ccatcctccg gcgggatcca tatcgtacaa atcctcaata ttctggaaaa cttcgatatg
    10381 aagaaatacg gctttggcag cgccgatgcg atgcaaatca tggcagaagc ggagaaatac
    10441 gcctacgccg accgctcgga atatcttggc gacccggatt ttgtcaaagt accgtggcag
    10501 gcgctgacca ataaagccta tgccaaatct attgccgatc aaattgatat caataaagcg
    10561 cagccatcca gcgaaattcg ccccggcaag cttgcgcctt atgagagtaa tcaaactacc
    10621 cattactcag tggtggataa agatggtaac gcggtggcgg tgacctatac gctgaacacc
    10681 accttcggta cgggcattgt cgcgggcgag agcggtattc tgcttaataa tcagatggat
    10741 gatttctccg ctaaaccggg cgtaccgaac gtttacgggc tggtgggcgg tgatgccaac
    10801 gccgtcgggc cgaataaacg tccgctgtcg tcaatgtcac caacgattgt ggtgaaagac
    10861 ggtaaaacct ggctggtcac cggtagccct ggcgggagcc ggatcatcac tacagtgctg
    10921 caaatggtgg tgaatagcat cgattatggc atgaacgtcg ccgaagcgac caatgcgccg
    10981 cgtttccacc atcagtggtt gccggacgag ctgcgtgtcg aaaaagggtt tagcccggat
    11041 acgctcaagc tgctggaagc aaaaggtcag aaagtggcgc tgaaagaggc gatgggcagt
    11101 acacaaagca ttatggttgg gccggacggt gagttgtacg gcgcatccga cccgcgctcg
    11161 gtggatgatt taacggcggg gtactaaggt tagcggccct cttcgtggga agagggctat
    11221 tttgtcaggg caagccgaag gtagcctttt ttatttcgta atcctgtaga tattcttcca
    11281 gcggctttgc cgttcccaga gaatgaattt caccactgtc tttatcaata ataaaaggtg
    11341 cgttaccagc taagcgcgcg gcctcatctc cagtttcgag aaattctcgt gcttcgaaac
    11401 agaaatacca gccctagcta aagcgtccat gtagagtaat gacgaccggg agatctgcat
    11461 catcaaggta atggttcgct ttcgcgaatg cgtcgtgata agtaatcata attataataa
    11521 atattattgt tgagtgttat attattattc ctgtgtgata cattgagcaa agacgcgttc
    11581 atcttcgtca aagatattat taaatgctgg ttttgaaaaa agttcatcgg ataagatata
    11641 gtcacgaaat aagtatctgc taatatttta tgatttcttt ttcagaacgt cgaacgggat
    11701 tttcttattt aagatatcag aatcttatga ttcgggtaaa attctaaata aatcaacatg
    11761 tcattaaaat catcatagcc attagctatt tcggctaaaa tagagactac atgtcttcgg
    11821 tccatctcac ttaaggagtg tagttccgtt gtaagttttt ccatagcttg cactgctaaa
    11881 tttcgaacaa ggaattttct gctggtaatc tctaaaaaga tggcat
//
LOCUS       DADKRT010000132        11883 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.133, whole genome shotgun sequence.
ACCESSION   DADKRT010000132 DADKRT010000000
VERSION     DADKRT010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11883
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.133"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(39..353)
                     /locus_tag="JQ356_003036"
                     /pseudo
     CDS             complement(39..353)
                     /locus_tag="JQ356_003036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
     gene            complement(468..875)
                     /locus_tag="JQ356_003037"
     CDS             complement(468..875)
                     /locus_tag="JQ356_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HAY4623058.1"
                     /translation="MIIMGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQS
                     GGLGAILSTWLSNQQSNQSVSGEQLESAPGTNAVSDLGQKLGVDTSTASSLLAEQLPK
                     IIDALSPQGEVSSQANNDLLSAGMELLKGKLFR"
     gene            complement(1106..3520)
                     /gene="gyrB"
                     /locus_tag="JQ356_003038"
     CDS             complement(1106..3520)
                     /gene="gyrB"
                     /locus_tag="JQ356_003038"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HAY4623059.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
                     EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
                     TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFI
                     TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
                     GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADLLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            complement(3549..4622)
                     /gene="recF"
                     /locus_tag="JQ356_003039"
     CDS             complement(3549..4622)
                     /gene="recF"
                     /locus_tag="JQ356_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HAY4623060.1"
                     /translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDG
                     HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWACFHNEPGFFTAWSNLKRLLKQ
                     RNAALRQVTRYEQLRPWDKELIPLVEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
                     SFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            complement(4622..5722)
                     /gene="dnaN"
                     /locus_tag="JQ356_003040"
     CDS             complement(4622..5722)
                     /gene="dnaN"
                     /locus_tag="JQ356_003040"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HAY4623061.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
                     NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            complement(5727..7130)
                     /gene="dnaA"
                     /locus_tag="JQ356_003041"
     CDS             complement(5727..7130)
                     /gene="dnaA"
                     /locus_tag="JQ356_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HAY4623062.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
                     QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
                     PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
                     IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
                     GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVR
                     ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
                     DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
                     SHDIKEDFSNLIRTLSS"
     gene            7427..7507
                     /locus_tag="JQ356_003042"
     CDS             7427..7507
                     /locus_tag="JQ356_003042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623063.1"
                     /translation="MTIDKNWLNRSNKDPGRSLRFTHQPV"
     gene            7737..7877
                     /gene="rpmH"
                     /locus_tag="JQ356_003043"
     CDS             7737..7877
                     /gene="rpmH"
                     /locus_tag="JQ356_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HAY4623064.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            7894..8253
                     /gene="rnpA"
                     /locus_tag="JQ356_003044"
     CDS             7894..8253
                     /gene="rnpA"
                     /locus_tag="JQ356_003044"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HAY4623065.1"
                     /translation="MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            8217..8474
                     /gene="yidD"
                     /locus_tag="JQ356_003045"
     CDS             8217..8474
                     /gene="yidD"
                     /locus_tag="JQ356_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HAY4623066.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            8477..10123
                     /gene="yidC"
                     /locus_tag="JQ356_003046"
     CDS             8477..10123
                     /gene="yidC"
                     /locus_tag="JQ356_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HAY4623067.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAA
                     GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET
                     SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNT
                     FTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYT
                     ANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            10229..11593
                     /gene="mnmE"
                     /locus_tag="JQ356_003047"
     CDS             10229..11593
                     /gene="mnmE"
                     /locus_tag="JQ356_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HAY4623068.1"
                     /translation="MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPR
                     YADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPG
                     LRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE
                     ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR
                     NKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            11836..>11883
                     /gene="tnaC"
                     /locus_tag="JQ356_003048"
     CDS             11836..>11883
                     /gene="tnaC"
                     /locus_tag="JQ356_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase leader peptide"
                     /protein_id="HAY4623069.1"
                     /translation="MNILHICVTSKWFNID"
BASE COUNT         2717 a         3253 c         3069 g         2844 t
ORIGIN      
        1 ggacaggggt atcgcttagt ttttcaattt cctatacgtg aaccgacttc gcgagagagt
       61 ttttccagga aacgatagtc gtcataactg agagcagttt gcgccacggt gctaccatca
      121 gcggccttct gtaccagcgc gccgttataa gtaatgcagt agtcgcccgg ctgttccata
      181 tgcagctctt tcaggtagtt gtgaacgcct gcataagggc gacccgtcgt tagcacgaca
      241 ttcacgccac gggcgcgagc tgcggcaatc gcatttttaa cggcgggtga aatggtgtga
      301 tcgggcagca gaagggtgcc atccatatcg atagcaatga gtttgatagc catgagttcc
      361 ccaggtagat tagttcctga cccatgctaa cgcgattccg ctcaaaaatc agtacaacac
      421 ccgagggaaa agggggatgc aacgcgggtt gcatgctccc catttgctta gcggaagagt
      481 ttccctttca gcagttccat acctgcggaa agcagatcgt tattggcttg tgaagacact
      541 tcaccttgcg gtgagagcgc atcaataatc ttcggcaatt gttctgccag taaactggaa
      601 gccgtactgg tatccacgcc aagtttttgc ccgagatcgg acaccgcatt tgtgccgggc
      661 gccgattcca gttgctcgcc gctaactgat tgattgctct gctgattact caaccaggtt
      721 gagagaatgg cccctaagcc gccactttgc agtttttcca gcagcacctg aatgccgccc
      781 tgctcctcaa cccaacttaa aatagcctga tatttccccg catcgccttt cagaaaggca
      841 ccgacaactt catcaaaaag ccccatgata atcacctgta aagcgttacg tgttgaccca
      901 aaaagtatag atctgcggga tgataattgc ggattgcaga aataaaaagg gcggagatga
      961 tctccgccct ttttttatag cttcttgccg gatgcggcgt taacgtctta cctggcctac
     1021 aaaatcatta aaattcaata cattgcaaga ttttcgtagg cctgataagc gtagcgcatc
     1081 aggcacgctc gcatggttaa cgccattaaa tatcaatatt cgccgctttc agggcgttct
     1141 cttcaataaa cgcacgacgc ggttctacgg cgtcgcccat cagcgtggtg aacaacaggt
     1201 cagcggcaat cgcatcctta acggtaacgc gcagcatacg acgactttcc gggtccatgg
     1261 tggtttccca cagctgttcc gggttcatct cgcccagacc tttataacgc tggatggaga
     1321 gaccgcgacg agactctttc accagccagt ccagcgcctg ctcgaagctg gctaccggct
     1381 gacgacgctc gccacgttcg ataaatgcat cttcttccag caagccacgc agtttctcac
     1441 ccagcgtgca gatacgacga tattcgccac cagtgataaa ttcgtgatcc agcggatagt
     1501 cagtatccac accgtgggta cgcacgcgaa caatcggctc gaacaggttt tgttcggcat
     1561 tggtgtggac atcaaacttc cactggctgc cgtgctgttc tttgtcgttc agttcgctga
     1621 ccagcgcgtt cacccagcgg gtaacggtct gctcatcaga gaggtcggct tccgtcagcg
     1681 tcggctgata gataagctct ttcagcattg ctttcggata acgacgctcc atgcggttga
     1741 tcattttctg cgtcgcgttg tactcagaca ccagtttctc taacgcttcg ccagccaatg
     1801 ccggtgcgct ggcgttggtg tgcagcgttg cgccgtccag cgcgatagag atctggtact
     1861 gatccatcgc ttcgtcgtct ttaatgtact gttcctgctt gcctttcttc actttgtaca
     1921 gcggcggctg agcgatgtag acgtgaccgc gttcaacgat ttccggcatc tgacgataga
     1981 agaaggtcaa cagcagcgta cgaatgtgcg agccgtcgac gtccgcatcg gtcatgatga
     2041 tgatgctgtg ataacgcagt ttgtccgggt tgtactcgtc acgaccgata ccacagccaa
     2101 gcgcggtgat aagcgtcgcc acttcctgag aagagagcat cttatcgaag cgcgctttct
     2161 caacgttgag gattttaccc ttcagcggca gaatcgcctg gttcttgcgg ttacgcccct
     2221 gcttcgcaga gccgcccgcg gagtcccctt ccaccaggta cagttcggaa agcgccggat
     2281 cgcgttcctg gcagtctgcc agtttgcccg gcaggcccgc taagtcgagc gcacctttac
     2341 ggcgggtcat ttcacgcgcg cgacgcgccg cttcacgggc acgggcagca tcgataattt
     2401 tgccaaccac gattttcgcg tcggttgggt tttccagcag gtattctgcc agcagttcgt
     2461 tcatctgctg ttcaaccgcc gatttcacct cagaagaaac cagtttgtct ttggtctggg
     2521 aggagaattt cgggtccggc acttttacgg aaacgaccgc aatcaggcct tcacgcgcat
     2581 cgtcaccggt ggcgctgact ttggcttttt tgctgtagcc ttctttgtcc atgtaggcgt
     2641 tcagggtacg ggtcatcgcc gcacggaagc ctgccaggtg agtaccgccg tcacgctgcg
     2701 gaatgttgtt ggtaaagcag tagatgtttt cctggaagcc atcgttccac tgcaacgcca
     2761 cttcgacgcc aataccgtct ttttcggtgg agaagtagaa gatattcgga tggatcggcg
     2821 ttttgttctt gttcagatat tcaacgaacg ccttgatgcc gccttcatag tggaagtggt
     2881 cttctttgcc gtcacgcttg tcgcgcagac gaatggaaac gccggagttg aggaacgaca
     2941 actcacgcag acgtttcgcc agaatttcat attcgaactc ggtcacattg gtgaaggttt
     3001 cgaggctggg ccagaaacgc accatggtgc cggttttttc agtctcgccg gtaaccgcca
     3061 gcggagcctg cggtacaccg tgttcgtaga tctgacggtg aattttaccc tcgcgctgga
     3121 taaccagctc cagtttttgc gacagggcgt ttactaccga aacaccaacg ccgtgcagac
     3181 cgccggacac tttataggag ttatcgtcaa atttaccgcc tgcgtgcaga acggtcatga
     3241 tcacttccgc cgccgatacg ccctcttccg ggtgaatacc ggtcggaatg ccgcgcccgt
     3301 catcctgtac agagacagag ttatcggcgt gaatggtgac gataatttct ttacagtgac
     3361 ccgcgagcgc ttcgtcgata gcgttatcta ccacctcgaa taccatgtgg tgcagaccgg
     3421 tgccgtcatc cgtgtcgccg atatacatac ccgggcgctt acgcaccgca tccagccctt
     3481 tcaggacttt gatactggag gagtcataag aattcgacat caacgtttct cgctcattta
     3541 tacttgggtt aatccgttat tttacccttt tccacggtaa acatcttcga attttcgtcc
     3601 gacatgtcta taacgtgttc agcactgatc gcgctgacaa agacctgtga ttgcgtcgct
     3661 tttaagcggc tggcaagcag cccgcgacgc tcatcatcaa gctcagaggc aaaatcatct
     3721 atcaggtaga gacaccgccg cccgctttca cgggtgagga actctccttg cgccagacgt
     3781 aaggcgcaca tcaacagctt aagctgccca cgcgataagg tatcttccac cggcgcaccg
     3841 tcggcgcgaa tgcgtaagtc cgctttatgc gggccatgcg cggtgtaggt tagctggcga
     3901 tcgcgttcaa aattacgttc cagcacctca gcatattctg tctctttctc ccagccgcgc
     3961 tggaaagaga aagtcagaga aaactcaggg agaaattgct tacaagtatc ggccatatca
     4021 gccgcgatac cggcgctata ctccgcgcgc caggtgctga tttgctccac cagcgggatc
     4081 agctctttat cccacgggcg tagctgttcg taacgtgtca cctggcgcag cgccgcattg
     4141 cgctgcttga gcaatcgctt gagattgctc caggcggtga aaaatccggg ttcgttgtga
     4201 aagcatgccc agtcgagaaa tgctcttctg tatttggggc cgccgttgag taaagtaaac
     4261 ccttctggcg ttatcagctg catcggcatc aggtgcgcca gctccgcgac tttatgcccg
     4321 tcagtaccgt cgatgcggac tttgctgtcg ccttgtttgt ctttggttaa gccaatcgcc
     4381 gtctcgcgct cttcgccctg taatcgccca tggagaacaa atgcctcctg ctcatggcga
     4441 atgacgcgac caatctgcaa actgcgaaac gcccgaccat ggccgagcgt atagatggct
     4501 tccagcacac tggttttgcc actgccgttg gcacctacca gaaagttaaa gccgggagat
     4561 aaggcgagat ccgcggtttc gatattgcgg aaatcgcgga tcaacaagcg ggtgagggac
     4621 attacagtct cattggcatg acaacataag ccgcgctctg gctggccgca tcttcaatct
     4681 gcacgctgga aaccgaatcg gtcagcatca tgcggacgtt ttcgcatttc agcgcgttca
     4741 gaacatccag cacatagctg acgttgaagc cgatttccat ctccgcaccg ctataggtaa
     4801 cgtcgaggat ctcttccgct tcttcctgtt ccgggttgtt ggcagtgatt ttcagctggt
     4861 tttcgctgac ataaagacgt acgccgcgga atttctcgtt agagagaatt gccgcacggg
     4921 caaacgcctg cttgagcaga tcgcagccag cttccagatg tttgtccggg ttcttcggta
     4981 gaacgcggcg gtaatccggg aagcgaccat ccaccagttt ggaggtgaag ataaagtcgc
     5041 caacgtgggc acgaatgtta ttgctgccaa tctgcacgcg cagcggattg tcgccgccgt
     5101 cgagcatacg catcagttca atcacgcctt tacgcggcac gatcaccgaa tggcttggca
     5161 aagattgacc aattggcatt gaacagactg ccagacggtg accatcggtc gctacggtgc
     5221 gcagttcttc gccttcggtt tcaaacagca taccgtttaa gtaatagcga acatcctgat
     5281 gcgccatcga aaactgggtc gcttcaatca gacgcttcat cgtcgcctgc ggcagggtaa
     5341 attcgacttc gctctgccag tcatcgaggt tcgggaaatc cgccgctggc agggtagaca
     5401 gcgaaaaacg gctacgcccg gagcgcacca gcatccgttc accttccagc tgcacggcaa
     5461 tttccgcgcc ttcaggcaga ccacggcaga tatcaaagaa tttgcgcgcc ggaacggtcg
     5521 ttgctcctgg ctcgtgtggc tgaaccagcg caacacgtgc caccatttcc atctcgagat
     5581 cagtaccggt cagcgacaac gtaccgtcag caacctgtaa cagcagatta ccgagaatcg
     5641 gtagcgtagg acgaccacct aacggaccgc tcacctgttg tagcggtttt aataaatgct
     5701 cacgttctac ggtaaatttc ataggtttac gatgacaatg ttctgattaa atttgaaaaa
     5761 tcttctttga tatcgtggct ctcttcacgc aactgctcga tcttacggca ggcatgaagc
     5821 accgtcgtgt ggtcacgacc accaaacgca tcgccaatct ccggcagact gtggttagtc
     5881 agctctttcg ccagcgccat cgccatctgg cgcggacgcg ccaccgagcg ggatcgacgc
     5941 ttggaaagga gatccgcgac tttgatcttg tagtactccg ccaccgtctt ctgaatattg
     6001 tcgatggtga ccagtttttc ctgcaatgcc agcaagtcgc gcagcgcctc acgcacgaag
     6061 tcgatggtga tcgcccgtcc ggtaaagttg gcattggcaa tgacgcggtt cagcgcccct
     6121 tccagctcac gtacgttaga tcgtagacgc ttggcgataa agaacgccac ttcgcccggc
     6181 aaacgaatgt cgttttcgtc ggcctttttc atcaggatcg ccacacgggt ttccagctct
     6241 ggcggttcga tcgccacagt cagtccccaa ccgaagcggg atttcaaacg atcctcaacg
     6301 ccgttgatct ctttcggata gcgatccgag gtgagaatga tctgttgatt accttccagc
     6361 agggcgttga aggtatggaa aaactcttcc tgagatcgtt ctttattagc aaaaaactga
     6421 atatcgtcga tcagcagtgc atctacggaa cggtagtagc gtttaaactc ttcgatcgcg
     6481 ttgttttgca gggctttaac catgtcctga acaaagcgct cggagtgcat ataaaccact
     6541 ttggcattcg gcttgcgcgc cataatgccg ttacccaccg catgcagtag gtgagtttta
     6601 cccagacccg tgccgccata aaggaacaac gggttatagg caccgccagg gttatccgcc
     6661 acctggcgag ccgccgcgcg cgccagttgg ttagatttac cttcaacgaa gttatcaaac
     6721 gtgtgtttga cgtttacgtt agaacgatag gtcggttctg ccggggccgg gacgttatcc
     6781 caacctgagc gcgtagaagg cgcagcacgt tgcggctgcg tttgcgccac ctgtgcaggg
     6841 gccgcgacgt tgctcgtcac tgccgcttgt ggcgtttgcg tcaccggttt ggtgccgact
     6901 tcaaaacgca gctgtggggc atccgctccg cagaaactgg ttagcagtcc attgatatta
     6961 ttaaggtact tgtcccgtac ccaatcgagg acaaaacggt ttggcgcgta cagggccagc
     7021 gtgttatcgc tcagttccgc ctgcaatggg cgtatccaca tactgaattc tgtggctggt
     7081 aactcatcct gcaatcgggc aagacactgc tgccaaagcg aaagtgacac ggcggactcc
     7141 actcgaacaa aagtcgataa tgactaaggc tgaaacattc atgattgttg acgtacgtcg
     7201 aaaagaccct gcttgagggt gacgcacgaa ccgctgtctg cggttatatg cccgatcaag
     7261 atcctgcaaa acgatcggga ccgcggatca tagcctaaac tgcgcaagag atcttctgtt
     7321 tctcacagat tttcccgatt tatccacagg actttccaga actcgctaag tgtaaacgat
     7381 cctgccgcga ggcgggcacg atttacgcca catattgaaa aatttaatga ccatagacaa
     7441 aaattggctt aatcgatcta ataaagatcc aggacgatcc ttgcgcttta cccatcagcc
     7501 cgtataatcc tccacccggc gcgccatgct ggtttccact ggtgtgaggt cgtacatttt
     7561 ccctgcgaaa aggtgcggaa aagcgcggta aataaggaaa gagaattgac tccggagtgt
     7621 acaattatta caatccggcc tctttaatca cccatggctt cggtgtccat cgtttcattt
     7681 ttcggcggat atccaataaa gccattgaat ttattcaagt ttaggtagaa atcgccatga
     7741 aacgcacttt tcaaccgtct gtactgaagc gcaaccgttc tcacggcttc cgtgctcgta
     7801 tggctactaa aaatggtcgt caggttctgg cacgtcgtcg tgctaaaggc cgcgctcgtc
     7861 tgaccgtttc taagtaatca agctaacccc tgagtggtta agctcgcatt tcccagggag
     7921 ttacgcttgt taactcccag tcaattcaca ttcgtcttcc agcagccaca acgggctggc
     7981 acgccgcaaa ttaccattct cggccgcctg aattcgctgg ggcatccccg tatcggtctt
     8041 acagtcgcca agaaaaacgt tcgacgcgcc catgaacgca atcggattaa acgtctgacg
     8101 cgtgaaagct tccgtctgcg ccaacatgaa ctcccggcta tggatttcgt ggtggtggcg
     8161 aaaaaagggg ttgccgacct cgataaccgt gctctctcgg aagcgttgga aaaattatgg
     8221 cgccgccact gtcgcctggc tcgcgggtcc tgatagccct cattcgggtc tatcaacgcc
     8281 tgattagtcc gctactcggg ccgcattgtc gtttcactcc aacctgttca agctacggaa
     8341 ttgaggcatt gcgcaggttt ggagtgataa aaggcagttg gttgacggtg aaacgcgtat
     8401 taaaatgcca ccctttacac cctggtggtg acgatcccgt cccgcccgga ccatttgata
     8461 ccagagaaca ctaacgatgg attcgcaacg caatctttta gtcatcgctt tgctgttcgt
     8521 gtctttcatg atctggcaag cctgggagca ggataaaaac ccgcaacctc aggcccaaca
     8581 gaccacgcag acaacgacca ccgcagcggg tagcgccgcc gaccagggcg taccggccag
     8641 tggccagggg aaactgatct cggttaagac cgacgtgctt gatctgacca tcaacacccg
     8701 tggtggtgat gttgagcaag ctctgctgcc tgcttacccg aaagagctga actctaccca
     8761 gccgttccag ctgctggaaa cttcaccgca gtttatttat caggcacaga gcggtctgac
     8821 cggtcgtgat ggcccggata acccggctaa cggcccgcgt ccgctgtata acgttgaaaa
     8881 agacgcttat gtgctggctg aaggtcaaaa cgaactgcag gtgccgatga cgtataccga
     8941 cgcggcaggc aacacgttta ccaaaacgtt tgtcctgaaa cgtggtgatt acgctgtcaa
     9001 cgtcaactac aacgtgcaga acgctggcga gaaaccgctg gaaatctcca cctttggtca
     9061 gttgaagcaa tccatcactc tgccaccgca tctcgatacc ggaagcagca acttcgcact
     9121 gcacaccttc cgcggcgcgg cgtactccac gcctgacgag aagtacgaga aatacaagtt
     9181 cgataccatt gccgataacg aaaacctgaa catctcttcg aaaggtggtt gggtggcaat
     9241 gctgcaacag tatttcgcga cggcgtggat cccgcataac gacggtacca acaacttcta
     9301 taccgctaat ctgggtaacg gcatcgccgc tatcggctat aaatctcagc cggtactggt
     9361 tcagcctggt cagactggcg cgatgaacag caccctgtgg gttggcccgg aaatccagga
     9421 caaaatggca gctgttgctc cgcacctgga tctgaccgtt gattacggtt ggttgtggtt
     9481 catctctcag ccgctgttca aactgctgaa atggatccat agctttgtgg gtaactgggg
     9541 cttctccatt atcatcatca cctttatcgt tcgtggcatc atgtacccgc tgaccaaaac
     9601 gcagtacacc tccatggcga agatgcgtat gctgcagccg aagattcagg caatgcgtga
     9661 gcgtctgggc gatgacaaac agcgtatcag ccaggaaatg atggcgctgt acaaagctga
     9721 gaaggttaac ccgctgggcg gctgcttccc gctgctgatc cagatgccaa tcttcctggc
     9781 gttgtactac atgctgatgg gttccgttga actgcgtcag gcaccgtttg cactgtggat
     9841 ccacgacctg tcggcacagg acccgtacta catcctgccg atcctgatgg gcgtaacgat
     9901 gttcttcatt cagaagatgt cgccgaccac agtgaccgac ccgatgcagc agaagatcat
     9961 gacctttatg ccggtcatct tcaccgtgtt cttcctgtgg ttcccgtcag gtctggtgct
    10021 gtactatatc gtcagcaacc tggtaaccat tattcagcag cagctgattt accgtggtct
    10081 ggaaaaacgt ggcctgcata gccgcgagaa gaaaaaatcc tgattcggtg agttttcgct
    10141 aaaataaggg cggtcagttg accgcctttt ttcttttcgt agggcggata agcaccgcgc
    10201 atccgccaca caaagcaaca ggaacatcat gagcgataat gacactatcg tagcccaggc
    10261 cacgcctccg ggacgtggcg gcgttggcat cctgcgcatc tccggcttca aagcccgtga
    10321 agttgccgaa accgtgctgg gtaaactgcc taagccgcgc tacgccgatt atcttccgtt
    10381 taaagacgcc gacggcagcg tgctcgatca ggggattgcg ctatggttcc ctggcccgaa
    10441 ctcgttcacc ggcgaagatg tgctggaact gcaaggtcat ggcggtccgg tgatcctcga
    10501 cctgctgtta aaacgtattc tgaccattcc cggcctgcgg attgctcgcc ctggtgagtt
    10561 ttccgaacgc gcgtttctta acgataaact tgacttagcc caggccgagg cgattgccga
    10621 tcttatcgac gccagttcgg aacaggcggc ccgttcggca cttaactcgc tgcaaggcgc
    10681 attctccgca cgggttaatc atctggtaga agccctcacc cacttgcgca tttacgtcga
    10741 agcggcaatt gatttccccg atgaagagat cgatttcctc tccgacggaa aaattgaagc
    10801 ccagctcaat gacgttattg ccgatcttga tgcagtgcgt gctgaagcac gtcagggtag
    10861 tttgttgcgc gaagggatga aagtggtgat tgccggacgt cctaacgccg gtaaatcgag
    10921 cctgttaaac gcgctggcgg ggcgtgaagc ggcaatcgta accgatatcg ccggaactac
    10981 gcgtgacgtg ctgcgtgagc atatccacat tgacggaatg ccgctgcata tcatcgatac
    11041 cgccgggcta cgtgaagcca gtgacgaagt agaacgtatt ggtatcgagc gcgcgtggca
    11101 ggaaattgaa caggccgacc gcgtgctgtt tatggtcgat ggcaccacaa cagacgccgt
    11161 ggatccggca gagatctggc cggaatttat tgcccgtctg ccagcgaaac tgccgatcac
    11221 cgtggtgcgc aataaagccg atatcaccgg cgaaacgctg ggaatgagtg aagtgaacgg
    11281 tcacgcgtta attcgtctct cggcaaggac tggtgaaggc gtggacgtgc tgcgtaacca
    11341 tctcaaacag agcatgggct ttgacaccaa catggaaggc ggcttcctgg cgcgtcgtcg
    11401 ccacctacag gcgctggaac aggcagcgga acatctacaa cagggcaaag cgcaactgtt
    11461 gggagcctgg gcaggtgaac tgctggcgga agagttgcgt ctggcacagc agaacttaag
    11521 cgaaatcacc ggggaattta cttcagacga cctgctgggg cggattttct ccagcttctg
    11581 tattggtaag taaccgcgct tacgaagccg tattctgact gtcagatgcg gcttcgcttc
    11641 attgttagca ctcctgttat tcctcaaccc tttttttaaa cattaaaatt cttacgtaat
    11701 ttataatctt aaaaaaagca tttaatattg ctccccgaac gattgtgatt cgattcacat
    11761 ttaaacaatt ttagaataga caaaattctt gagtattata ctgtagcctc gtgtctttcg
    11821 aggaataagt gcattatgaa tatcttacat atatgtgtga cctcaaaatg gttcaatatc
    11881 gac
//
LOCUS       DADKRT010000133        11808 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.134, whole genome shotgun sequence.
ACCESSION   DADKRT010000133 DADKRT010000000
VERSION     DADKRT010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11808
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.134"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(37..273)
                     /locus_tag="JQ356_003049"
     CDS             complement(37..273)
                     /locus_tag="JQ356_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HAY4623070.1"
                     /translation="MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTP
                     VMLYHKQLRHYVLLPSCLALIAAIMLMIMNLNQG"
     gene            414..1202
                     /gene="fhuF"
                     /locus_tag="JQ356_003050"
     CDS             414..1202
                     /gene="fhuF"
                     /locus_tag="JQ356_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HAY4623071.1"
                     /translation="MAYRSAPLYEDIIWRTHLQPQDAGLAQAVRATIAKHREHLLEFI
                     RLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGL
                     MVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETL
                     ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEK
                     TLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            complement(1240..1916)
                     /gene="bglJ"
                     /locus_tag="JQ356_003051"
                     /pseudo
     CDS             complement(1240..1916)
                     /gene="bglJ"
                     /locus_tag="JQ356_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418786.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
     gene            complement(1874..2599)
                     /locus_tag="JQ356_003052"
     CDS             complement(1874..2599)
                     /locus_tag="JQ356_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY4623072.1"
                     /translation="MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL
                     TLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLM
                     CPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMNETHDFSYRSVILTLSERK
                     VLRLLGKGWGINQIVSLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN
                     LPSVYGDAAEWNTAELRREMSHS"
     gene            3218..3988
                     /locus_tag="JQ356_003053"
     CDS             3218..3988
                     /locus_tag="JQ356_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HAY4623073.1"
                     /translation="MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMD
                     SVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV
                     EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAIITFFASTAAMYIRQLLAQ
                     HHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMF
                     KGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV"
     gene            3979..4452
                     /locus_tag="JQ356_003054"
     CDS             3979..4452
                     /locus_tag="JQ356_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HAY4623074.1"
                     /translation="MGVIEFLFALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAI
                     GHGSRMILMTRGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV"
     gene            4560..5081
                     /gene="dnaT"
                     /locus_tag="JQ356_003055"
     CDS             4560..5081
                     /gene="dnaT"
                     /locus_tag="JQ356_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HAY4623075.1"
                     /translation="MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYA
                     VTPARLAELLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALW
                     GVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTV
                     SEPDSQIPPGFRG"
     gene            5084..5821
                     /gene="dnaC"
                     /locus_tag="JQ356_003056"
     CDS             5084..5821
                     /gene="dnaC"
                     /locus_tag="JQ356_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001731874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HAY4623076.1"
                     /translation="MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAAL
                     ERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASF
                     IFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDL
                     SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVM
                     DRMRLGNSLWVIFNWDSYRSRVTGKEY"
     gene            5870..6364
                     /locus_tag="JQ356_003057"
     CDS             5870..6364
                     /locus_tag="JQ356_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HAY4623077.1"
                     /translation="MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNS
                     TTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLE
                     KLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGL
                     NFIS"
     gene            6618..8909
                     /gene="opgB"
                     /locus_tag="JQ356_003058"
     CDS             6618..8909
                     /gene="opgB"
                     /locus_tag="JQ356_003058"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HAY4623078.1"
                     /translation="MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNIT
                     LFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRHRR
                     HHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP
                     KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNY
                     LGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
                     LSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITA
                     KAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVEREG"
     gene            complement(9048..10070)
                     /locus_tag="JQ356_003059"
     CDS             complement(9048..10070)
                     /locus_tag="JQ356_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HAY4623079.1"
                     /translation="MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDI
                     HAWGGNQPFFSYPRVLGHEICGEIVRLGKNIADLKNGLQVAVIPYVACQQCPACKSGR
                     TNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAI
                     APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDF
                     DAQLRAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHK
                     KETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELI
                     KGVITF"
     gene            10209..11123
                     /locus_tag="JQ356_003060"
     CDS             10209..11123
                     /locus_tag="JQ356_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY4623080.1"
                     /translation="MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTT
                     VRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTLINQR
                     QLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQL
                     FELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHS
                     LLLSAADNIFFDQSLEIISVIFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLD
                     ATLALRNHLNSAKQSMIRSINENTRYAH"
     gene            11338..>11808
                     /locus_tag="JQ356_003061"
     CDS             11338..>11808
                     /locus_tag="JQ356_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4623081.1"
                     /translation="MEKENITIDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAM
                     LLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLD
                     RKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVIND"
BASE COUNT         3067 a         3013 c         2757 g         2971 t
ORIGIN      
        1 tatctttact tcctttcttg tttcttcctt gatttttcat ccctgattca aattcattat
       61 catcagcatg atggcagcaa taagcgccag gcacgatggt agcaaaacgt aatgccgtaa
      121 ctgtttgtga tacagcatca ccggcgtcaa tactaatccc atcagaatga caatccgcca
      181 ctgatccggc gataaatccg catacatcag ccctgcaatc agcaatcccg gcagcaacac
      241 tccccagcca ctgcccagcg tacgttgcaa catggtttca tctctttcat tgataatgat
      301 aactaatatc atatgataat ttttatcatt tgcaagccag agaaatccct tgctatcggg
      361 taaacctatc gctaggatta gcaatcatta tcatttagat tactatcccg attatggcct
      421 atcgttccgc accgctctat gaagatatca tctggcgaac gcatctccag ccgcaggatg
      481 ctgggcttgc acaagccgta cgtgcgacga tcgccaaaca tcgtgaacat ttgctcgagt
      541 ttatccgcct ggatgaaccc gctccgctta acgccatgac gctggcgcaa tggtcatcac
      601 cgaatgcgct aagttctcta ctcgcggtct attccgatca tatctatcgc aaccaaccaa
      661 cgatgatccg cgagaacaaa ccgctgatct cactatgggc acaatggtat atcggcctga
      721 tggtgccacc attaatgctg gcgctactga cgcaggaaaa ggcattagat gtgtcgccgg
      781 aacatttcca tgctgagttt cacgaaaccg gacgcgtcgc ctgtttctgg gtcgatgtgt
      841 gtgaagataa aaacgcaaca ccacattcgc cgcagcagcg aatggaaacg ttaatcagcc
      901 aggcgctggt tccggttgtg caggcactag aagcgaccgg agagatcaac ggcaaactta
      961 tctggagtaa taccggttat ttgatcaact ggtatctcac tgagatgaag caactgctcg
     1021 gcgaggcgac ggttgaatcg ctgcgccatg ccctcttttt tgagaaaacg ctcacgaacg
     1081 gtgaagataa tccactctgg cgtaccgtcg tgctgcgcga tggcctgctg gtgcgccgaa
     1141 cctgctgcca gcgttatcgc ttaccggatg tgcagcaatg tggcgattgt acgctgaaat
     1201 gaaagcactg ccggggaagt aaacccggca tcatgcggat taatagggat gcaacacatt
     1261 acttgcttcg caatgccgca tacataacag aatatctgcg gcctccaaca cccctgcatc
     1321 agaactgacg cccagtttcg acatcacatt aaatttatgt gcacggatcg ttttgatatt
     1381 gcgtttaagc tgctcggcaa tttgtgtcat tgagtagcca cgcgacataa agcgcaatat
     1441 ttctctctcc gtcgggctta gcgtccggct ttggttaatg taccactgat tgttcagtcg
     1501 gtcggtcgcc tgacgtacac catttaatga caaaaagagt tcctgatgaa aaatctccag
     1561 cgttgacgct ttacttaata caccgtccag cggtgatggc gacaatgaac caatcagccg
     1621 agcttcaata tcatcatccg caataactaa acgccgggta cgcggaaact taatcgccag
     1681 ttcagtcagg caagataatc cctctctgcg ctcacttctc atggcagaaa aagaaaaatg
     1741 accgccgcaa atgagatccg cgacatggca tcctgaaatg actcctgact ggtataggta
     1801 tggagcttat aagggttacc cgcaaacttt ctgaataaac tctcaatacc gatactgctc
     1861 atgacgcatt tttctatgag tgcgacattt ctcttcttaa ttcggctgtg ttccattctg
     1921 cggcatctcc ataaacagaa ggcaagttaa gttctcttgc accctgcgcg ctatttatcc
     1981 atgcatacat ttcagcgttg ctgtgaattg ccagtcgacg catcgcactg tttttttggg
     2041 cgctgatagt tttattactt ttcttaagca acgaaactat ctggttgatg ccccatcctt
     2101 tacctaatag ccgcagtacc ttgcgctctg aaagagtgag aatgacggag cgatagctaa
     2161 aatcatgagt ttcattcatt gccggagagg tcagcatggc gctgatacgc tctgcgtgcg
     2221 tattgccgga acgtacggtc ttgaccagat tctcaatggg ttcaacatca gacaataacg
     2281 tcgccgtagg gcacatgagc aattctactg cctgggaata ccaggagcgt gacaccatga
     2341 aaacccagtg aatttcccga tattgtgaga ttaaagaata ataatgttca caaacagaac
     2401 gtggatcttc actttcaccg gctaaatcag caatgactaa tccggaacga cgtaattgta
     2461 ataaggtaag gtcctccgca gaggcgctgg atattatttc atattcaggg aagtgagtcc
     2521 tcatgacctc ttttaaccct gcttgcataa caggtatttt actgataaca attccatttt
     2581 tgcagcatcc tggcaacata tttcctccac atccactatc taaaaatcat gatggtttat
     2641 tcaggatatt cattccttaa atgtttccag caaattaata gattaagcga ataaattatc
     2701 cttagcattc actttcatat cagcatactc ctgctgcaca acaactccac tgcatgtgtc
     2761 agaaggttag catcaaatga taacctagtg aaatagcctg gagacattta aaatatctac
     2821 attaagttgt taggaatact taatgaaaaa cagaaatcac attcatttaa tttataatta
     2881 aatgatatcc cttcccgcag aatgaaaagt cacacaacca atatttattc aatgaaatct
     2941 gatggtttta acttgttaac attaaaaaac gtgcccggtt atctattatc ctgattcgta
     3001 aaggccaaac aataaattca ttatagtgat aatattcatg tgatagtttg tttgcggcga
     3061 gagataattc gctttttatc accgagcttg tcccgataac caggattaat cagcgcaatt
     3121 ttgatcttaa cctaccgcaa aacaaccgtg cttcatgata caaatggatt ctcattatct
     3181 gaacaatacg cagcacgtct atgacaaagg gcgagttatg caaactgagc aacagcgagc
     3241 cgtaacacgg ctttgtatcc agtgtggatt atttcttttg caacatggtg cggaaagcgc
     3301 gttggttgat gagctttcct cacgactggg tcgggcgttg gggatggaca gcgtcgaaag
     3361 ttctatctct tcgaacgcca tagtgctgac aaccattaaa gatgggcaat gcctgacatc
     3421 gacacgtaaa aatcacgatc gcggcattaa tatgcatgtg gtgactgaag tccagcacat
     3481 tgtgattctg gcggagcacc atctgctgga ttacaaaggc gtagagaaac gatttagcca
     3541 aattcagcca ttacgttacc caagatggct ggtagcctta atggttggcc tttcttgcgc
     3601 ctgtttctgc aaactcaata aaggtggctg ggatggtgcc atcatcacct tctttgccag
     3661 tacggccgcg atgtatatcc gccagctgct ggcacaacat catcttcatc cgcagatcaa
     3721 cttttgcctc accgctttcg ccgccaccac catttccgga ttgcttttgc aacttcccac
     3781 tttcagcaat acacccacta tcgcgatggc cgccagcgtt ctgctgctgg tgccgggatt
     3841 tccgttgatt aatgccgtcg ccgatatgtt taaaggccac atcaataccg gactggcacg
     3901 ctgggcgatc gccagtctgc tgacactggc tacctgcgtc ggcgtggtga tggcactgac
     3961 gatttggggg ctacgcggat gggtgtgatc gagtttctgt ttgcattggc gcaggatatg
     4021 atcctcgccg ccattccagc ggtcggcttt gcgatggtgt tcaacgttcc cgttcgggca
     4081 ttacgctggt gtgcgctgct tggcgcgatt ggtcatggtt cacgaatgat cttaatgacc
     4141 agagggctga atattgagtg gtcaaccttt atggcctcca tgctggtcgg caccattggt
     4201 attcaatggt cgcgctggta tctggcgcat ccgaaagtgt ttaccgtggc ggctgttatc
     4261 cctatgttcc cgggcatatc ggcttatacc gcaatgattt cggcggtaaa aatcagccag
     4321 ttaggttaca gcgaaccgtt gatgattacc ctgttaacca actttcttac agcttcatcg
     4381 attgttggtg cgttatccat cggtctttcc attcctggat tatggttgta ccgcaagcgc
     4441 cctcgcgtat aaaattgcct cgcttaaagc acacggatga gagacagcct cctctcctcc
     4501 gtgtgttact ataaaagtta tctcccttct cgttcatcgt tccatatttg agaaacagta
     4561 tgtcttccag agttttgacc ccggacgtcg ttggtattga cgccctggta cacgatcacc
     4621 aaaccgttct ggcaaaagct gaaggcggtg tggttgccgt atttgctaac aatgccccgg
     4681 cgttttatgc cgtcacgcct gcacgcctgg ctgaactgct ggcgcgtccg ggaagcgatg
     4741 tcgctctgga cgatcaactc tatcaggaac cgcaagccgc tcccgttgct gtacccatgg
     4801 ggaaattcgc catgtatccg gactggcaac ccgatgccga ttttatccgc ctggcggcgc
     4861 tatggggtgt ggcactaaga gagccggtga ccaccgaaga actggcctca ttcattgcct
     4921 actggcaggc ggaaggtaaa gtctttcacc atgtgcagtg gcaacaaaaa ctggcgcgca
     4981 gcctgcaaat cggtcgtgcc agcaacggcg gactgccgaa acgagatgtg aatacggtca
     5041 gcgaacctga cagtcaaatt ccaccaggat tcagagggta acgatgaaaa acgttggcga
     5101 cctgatgcaa cgcctgcaaa aaatgatgcc tgcccatatc aaacctgcat tcaaaacggg
     5161 tgaagaacta ctggcctggc agaaagaaca aggagcgatc cgctccgccg ctctcgaacg
     5221 tgaaaatcgg gcgatgaaaa tgcagcgcac ctttaaccgc tccggtattc ggccactgca
     5281 tcagaactgc tcctttgaga actatcgcgt tgagtgtgaa gggcagatga atgcgttaag
     5341 caaagcgcgc cagtacgtcg aagagtttga cggcaacatc gccagcttca tcttttctgg
     5401 taagccagga accggcaaaa accatctggc ggcggcaatc tgcaacgagc tgctgctacg
     5461 cggtaaatcc gtattgatca tcaccgtggc cgatattatg tcggcgatga aagatacctt
     5521 caggaatagc ggtaccagtg aagaacaact gcttaacgat ctgagcaacg ttgatctgct
     5581 ggtgatcgat gagatcggcg tgcagaccga atcgaaatac gaaaaagtga tcatcaacca
     5641 gatcgtcgat cgccgctctt cttccaaacg cccaaccggg atgctgacca acagtaatat
     5701 ggaagagatg accaagttgc tgggcgaacg cgtgatggac cgtatgcgcc tgggtaacag
     5761 tttgtgggtg atcttcaact gggatagcta ccgtagccgg gtaacaggta aagagtatta
     5821 atccccgttt ctggcggtat actgcgacac aattccacct tgagtaatga tgatgaaaac
     5881 tgttaaacat cttctgtgct gtgccattgc cgccagcgca ttaatttcca ccggggtgca
     5941 tgctgcgtcc tggaaagatg cgctctccag cgccgccagc gaacttggca accaaaacag
     6001 cacgacacag gaaggcggtt ggtcgctcgc gtcattaact aacttgctta gcagcgggaa
     6061 ccaggcctta agcgcagata acatgaacaa cgccgcaggc attctgcaat actgcgcgaa
     6121 gcaaaagctg gcgtcggtaa ccgatgccga aaacatcaag aaccaggtgc tggaaaagct
     6181 gggcctgaac agtgaagagc aaaaagaaga caccaactat ctggatggca ttcagggttt
     6241 gctgaaaacc aaagatggtc agcaactcaa tctggataac atcggaacga ctccgctggc
     6301 agaaaaggtg aaaaccaaag cctgcgatct ggtgttaaag caggggctga acttcatttc
     6361 ctgaaccgcg aaacgccgcg ttttagctgt tacccggctg acgcggctct ctcctgccct
     6421 tttccctgct tctggacggt tttccccctg ttacacggga agcgaccgcg atcaaaaaag
     6481 tctgtttata aactaattcc taacaacatc gcattttttt gacactagaa ttgcagcaat
     6541 atggcgacgc cattacattg ttcttctcaa aaagcttaaa cgttggctaa acggcccggt
     6601 ttagtgagga tcgcccgttg tcagaactac tctctttcgc cctttttctc gcctctgtgc
     6661 tgatttacgc atggaaagcg ggacgtaaca cctggtggtt tgcagccaca ttaacggtgc
     6721 tggggctatt tgtcgtttta aatatcaccc tgtttgccag cgactatttt actggcgatg
     6781 gtattaacga cgcggttctc tataccttaa ccaacagcct gaccggtgct ggcgtcagca
     6841 aatacatcct gccgggtatc ggcattgtgc tggggctgac agcggtgttc ggtgcgctgg
     6901 gctggatcct gcgccatcgt cgccatcatc cgcaccattt tggttacagc ctgctggcgc
     6961 tcttactggc gctgggttcg gtggacgcca gcccggcatt tcgtcagata acggaactgg
     7021 tgaaatccca gtcacgcgat ggcgacccgg actttgcggc ttattataaa gagccgtcga
     7081 aaactatccc tgacccgaaa ctcaacctgg tttatatcta cggcgaaagt ctcgagcgga
     7141 cctattttga taacgaagct ttcccggatc tcacgcctga actgggcgcg ttgaaaaatg
     7201 aaggcctgga tttcagccac acgcagcagc tgccaggaac ggattacacg attgcgggca
     7261 tggtggcttc tcagtgcggc ataccgctgt ttgccccctt tgaaggcaac gcctccgcct
     7321 ctgtctccag cttcttcccg cagaacatct gtctgggcga tatcctgaaa aactcgggtt
     7381 atcagaacta tttcgtgcag ggcgcgaatc tgcgttttgc cggtaaagat gtgttcctga
     7441 agtcgcatgg cttcgaccac ttatacggct cagaagagct gaaaagcgtg gtggccgacc
     7501 cgcactatcg caacgactgg ggattctacg acgataccgt tctcgatgaa gcgtggaaaa
     7561 agtttgaaga gctttcccgc tcaggtcagc gattctcact gtttaccctg acagtcgata
     7621 cccatcaccc ggatggtttt atctcgcgta cctgtaaccg caaaaaatat gattttgacg
     7681 gtaagccgaa ccagtcattc agcgcggtaa gttgcagcca ggagaatatc gcggcgttta
     7741 tcaacaaaat caaagcgtca ccgtggttta aagataccgt catcgtcgtc tcttctgacc
     7801 atttagcgat gaacaacacg gcgtggaaat acctcaataa gcaggatcgc aataacctgt
     7861 tttttgtcat tcgtggcgac aagccgcagc aagagacgct ggcagtgaag cgtaacacga
     7921 tggataacgg cgcgacggtg ctggacattc tcggtggcga taactatctc ggacttggtc
     7981 gtagcagttt atccgggcag tcgatgtcgg aaatcttcct caatatcaaa gagaaaacat
     8041 tggcgtggaa gccggatatc atccgcctgt ggaaattccc taaagagatg aaagagttca
     8101 ccatcgacca gcagaaaaac atgattgcct tctcgggtag ccatttccgt ttgccgctgc
     8161 tgttgcgggt ttcagacaaa cgcgtggaac cgctgccgga aagcgaatac tcagcaccgc
     8221 tgcgtttcca gctggccgat ttcgctccac gcgacaattt cgtctgggtt gaccgttgct
     8281 ataagatggc acaactctgg gctccggaac tggcactctc caccgactgg tgtgtctcgc
     8341 aagggcagct tggcggtcag caaattgttc aacatgttga caaaacaaca tggcagggca
     8401 aaacggcatt taaagatacg gtcatcgaca tggcgcgtta taaaggcaat gtcgatacgc
     8461 tgaaaattgt tgataacgat attcgctaca aagccgacag tttcatcttc aacgtcgccg
     8521 gtgcgccaga agaggtgaaa cagtttagtg ggatttcccg tccagagtcg tggggccgct
     8581 ggtccaacgc gcagctgggc gatgaagtaa aaatcgagta caagcatccg ctgccaaaga
     8641 aatttgacct ggtgattacc gccaaagcat acggcaataa cgccagccgt cctattccgg
     8701 tacgcgtagg caatgaagaa caaacccttg tgctgggcaa tgaagtgacc accaccacac
     8761 tgcatttcga taacccaacc gatgccgaca cactggtaat tgtgccgccg gaacctgtct
     8821 caaccaacga agggaatatc ctcggacact cgccacgtaa gctcgggatc ggcatggtgg
     8881 aaattaaagt ggtggaacgt gaaggataat tcctgactga tgtgtaggtc gcataaggtg
     8941 cgacctacac accttctgcg gcctacaaaa catcattgag aaacagaaaa aaacagcgcc
     9001 caacacttcc ccggacgctg catggcaact ttaataatct cgccttatca gaaagtaatt
     9061 acacccttaa tcaactcacg attgttaatc acatcgcgct cgtaggtttc tgccagcgtg
     9121 gcgaacggat agcgatgggt taacatcatg tcagcagtga tttttccttc cgccatcagt
     9181 cgaccgactt tagcaaaatc ttccggcgtg gcgttgcggc tacccatcat cgtcgtttct
     9241 tttttatgga attccggatc ggagaactgc aactcacctt taaacaggcc gacaaatacc
     9301 accgtgccgc cgtgacgaat caaattcacg gtgttattca tcgcatgttg attacctgtc
     9361 gcgtcgatca ctttctgcgc cagcgaacca ccaaactgcg cccgtagctg cgcgtcaaaa
     9421 tcttcggctg acgggtccag taaaggtaat tccagacgcg ttgccacatg ttcacggcgc
     9481 gccggactgg tatccgccac caccacctgt gcgccatcgg ctttagcgat tgccgccgcg
     9541 cccagaccga ttggccccgc cccgaccacc agcacctgct cgccgggagc aatggctgcg
     9601 cgacgcaccg catgagcgct aatagcgaaa ggttcaatca atgctgccgc ctgcgggtca
     9661 ataccgtctg cgggcaaaat gttcgccacc ggcacgctca aatactcact aaaaccgcca
     9721 tcctgatgca cgccaatgac tgaaattttt tcacagcaat tggtacgccc gcttttacac
     9781 gccgggcatt gctgacaggc aacataaggg atcacagcaa cttgcagacc atttttaaga
     9841 tcagcaatat ttttacccag cctaacaatc tccccacata tttcatggcc taaaacacgt
     9901 ggataactaa aaaatggttg atttccaccc caggcatgaa tatcggtacc gcaaatcccg
     9961 acagacttaa tttttattaa tgcttcattg tcacccggaa taggtatctc gcgttgtttc
    10021 cagactaatt ctttcggctg ctggcaaatt aaaacattca tcgtagacat gattcggctc
    10081 tccatttttt gttgccttag atatcaatga aaatgaaaaa tggcagcgga acggaaaatc
    10141 tgttttgtga aaacacacgc ataaaaatgt tttaaatcgg gttttaatgg actcacaagg
    10201 aggaaaatat gagtcgttca caaaatttac gccacaatgt gattaaccag gtcattgatg
    10261 atatggcgcg gggtcatatc ccttccccac ttccatcgca aagtgcgctg gcggaaatgt
    10321 acaacatcag ccgcaccaca gtgcgtcata ttctcagcca tttacgcgaa tgcggcgtct
    10381 tgacgcaggt tggaaacgac tatgttattg cgcgtaaacc tgaccacgat gacggtttcg
    10441 cctgtactac cgcttcaatg agtgaacaaa acaaagtgtt tgagcaggct tttttcacgc
    10501 tgataaacca gcgccagtta cgcccagggg aaactttttc tgaactgcaa ctggctcggg
    10561 ccgcgggtgt cagcccggtg gttgtaagag aatatctttt aaaattcggc cgttataatc
    10621 ttattcaaag cgaaaagcgc ggccagtgga gcatgaagca attcgatcaa tcctacgccg
    10681 agcagctgtt tgagctacgc gaaatgctcg aaacacattc acttcagcac tttctcaacc
    10741 tgcctgatca tgatccccgc tggctgcagg cgaaaaccat gctcgaacgt catcggctac
    10801 tgcgtgacaa catcggcaat agctttcgca tgttctcgca acttgacaga gattttcact
    10861 ccttactgct ttcagctgcc gacaatatct tttttgatca atcgcttgag atcatctcag
    10921 tcatctttca ttttcactat caatgggacg aaagcgatct taaacagcgc aatatcattg
    10981 ccgtcgatga gcatatgacc attctcagcg ctctgatttg ccgcagtgac ctcgatgcca
    11041 cccttgcgct ccgtaaccat ttgaattcag ctaaacaatc aatgattcga tccattaatg
    11101 agaacacgcg ttatgctcat taagtacgga ttaaaaacag caaactatta gcgggtgcac
    11161 ggttttatca aaagataaat accgggaaat tcccgcttac ctatgctcac aatcagtcga
    11221 ctaaaaatgt ttttgtgagc ggtagtaaag tcctaaaact ttaacctgcc gttaatgtca
    11281 accttgcgta atgcacaatt acgtaaacaa ttaaaattat aaatacagga gtccggcgtg
    11341 gaaaaagaaa atatcaccat cgatccgcgt tcttcattta ctccatcttc gtcggcagat
    11401 attcccgtgc caccagatgg attagttcaa cgcagtaccc gaattaaacg cattcaaacc
    11461 accgccatgt tgttattatt ttttgcggcg gtaatcaatt atctcgaccg cagttcgctg
    11521 tcggtagcaa atttaacgat tcgtgaagaa ttgggattaa gtgccactga aatcggcgct
    11581 ttgctctccg tgttttcact cgcttacggg attgcgcaac ttccttgcgg cccactattg
    11641 gatcgtaaag gcccacgcct gatgctggga ctggggatgt tcttctggtc actgttccag
    11701 gcaatgtctg gcatggtgca caactttacg cagttcgtgt tggtgcgtat cggtatgggg
    11761 attggtgaag cgccgatgaa cccatgcggt gtaaaagtca ttaacgac
//
LOCUS       DADKRT010000134        11795 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.135, whole genome shotgun sequence.
ACCESSION   DADKRT010000134 DADKRT010000000
VERSION     DADKRT010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11795
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.135"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            486..1142
                     /gene="pphA"
                     /locus_tag="JQ356_003062"
     CDS             486..1142
                     /gene="pphA"
                     /locus_tag="JQ356_003062"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HAY4623082.1"
                     /translation="MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPW
                     RDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGD
                     WFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQ
                     VLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ
                     "
     gene            complement(1143..1418)
                     /locus_tag="JQ356_003063"
     CDS             complement(1143..1418)
                     /locus_tag="JQ356_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HAY4623083.1"
                     /translation="MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCE
                     DIVVDVYNTEQQCLYSMSDQRIRQGGCFPIEDFIDGFWRPAQEYGDF"
     gene            complement(1439..1675)
                     /locus_tag="JQ356_003064"
     CDS             complement(1439..1675)
                     /locus_tag="JQ356_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HAY4623084.1"
                     /translation="MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAW
                     DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
     gene            complement(1793..3232)
                     /gene="rsmF"
                     /locus_tag="JQ356_003065"
     CDS             complement(1793..3232)
                     /gene="rsmF"
                     /locus_tag="JQ356_003065"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HAY4623085.1"
                     /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN
                     TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHA
                     NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD
                     LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD
                     REAGQIRQAAAGVGLNWDENLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHN
                     KGYRWQHEAVIALATPDNVNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI
                     GLAKRIGSRLKNSYPRELVRDGKLFTGNA"
     gene            complement(3312..5945)
                     /gene="yebT"
                     /locus_tag="JQ356_003066"
     CDS             complement(3312..5945)
                     /gene="yebT"
                     /locus_tag="JQ356_003066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding membrane homeostasis protein YebT"
                     /protein_id="HAY4623086.1"
                     /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQD
                     RSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNNGD
                     LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG
                     SRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH
                     SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL
                     LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV
                     LTLTLTAPESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS
                     LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY
                     ASETAARAVSGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY
                     PEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPYINVEPGRGNPRRDFELQEATIT
                     DSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
                     QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK
                     HFLLQESEPKEWREWGTALPK"
     gene            complement(5914..7197)
                     /gene="yebS"
                     /locus_tag="JQ356_003067"
     CDS             complement(5914..7197)
                     /gene="yebS"
                     /locus_tag="JQ356_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HAY4623087.1"
                     /translation="MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEIN
                     SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
                     MQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
                     EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
                     PQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL
                     LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
                     LLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
     gene            7327..7824
                     /locus_tag="JQ356_003068"
     CDS             7327..7824
                     /locus_tag="JQ356_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HAY4623088.1"
                     /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
                     AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
                     ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF
                     ASVAG"
     gene            7921..8619
                     /gene="proQ"
                     /locus_tag="JQ356_003069"
     CDS             7921..8619
                     /gene="proQ"
                     /locus_tag="JQ356_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HAY4623089.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
                     RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
                     PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
                     SGMSLIVRAEHLVF"
     gene            8639..10687
                     /gene="prc"
                     /locus_tag="JQ356_003070"
     CDS             8639..10687
                     /gene="prc"
                     /locus_tag="JQ356_003070"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HAY4623090.1"
                     /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGD
                     ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA
                     ELNALWDSKVKFDELSLKLAGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI
                     SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT
                     RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL
                     RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA
                     FGPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
                     ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK
                     "
     gene            10879..11760
                     /gene="htpX"
                     /locus_tag="JQ356_003071"
     CDS             10879..11760
                     /gene="htpX"
                     /locus_tag="JQ356_003071"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HAY4623091.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF
                     GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
                     TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS
                     RHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRTGEYLK"
BASE COUNT         3034 a         2906 c         3044 g         2811 t
ORIGIN      
        1 gcaaccccaa atcgtaaagg aaaccgtagc acgtcgtatg caagaacgtg ccacggctgg
       61 ctgatggatg ttcgatagcg cgagtttgaa tgaaaatcag ccggagatga ttttacataa
      121 ttgctacgga attattcaat acaggaattg cttgcgtctg catggattga cctgaaattt
      181 tcccgaaaat ttctctaaaa aactcgaaaa aaatggtaac tggttgaatg tattaatatg
      241 caatggtacg tgtcagggat taaaagatga acgtaaattt attcaacgca ttaattttaa
      301 agggttttat tgtttgttga cgaaaacagg aatcgtgttc ggtctctttt tatctgttaa
      361 aagccagaag catttccttc gctgacttta tagtcaacca taacacacac tctactgtct
      421 gagtccagcg ttttttaaca ttcttgttaa gattatgtga tctttagcac gggaggaaaa
      481 tattgatgaa acagcctgcg cccgtttatc agagaattgc gggtcatcaa tggcgacata
      541 tctggctttc tggcgatata cacggttgtc ttgagcagtt gcgccgcaaa ttatggcatt
      601 gtcgttttga tccgtggcga gatttactta tctcagtggg agacgttatc gatcgtgggc
      661 cgcaaagttt acgttgtctg cagttactgg aacaacattg ggtttgtgcg gtaagaggca
      721 atcatgaaca gatggcgatg gatgcgctgg catcccagca gatgtctttg tggttgatga
      781 atggcggcga ctggtttatt gcgctggcag ataatcaaca gaaacaagcg aaaacggcgc
      841 tggaaaaatg tcagcatttg ccctttattc ttgaagtaca cagtcgcacc ggcaagcatg
      901 ttattgctca tgcggattat ccagatgatg tttatgaatg gcaaaaggac gttgatttgc
      961 atcaggtctt gtggagccgc tcgcgattag gtgaacgcca aaaagggcag ggaattacag
     1021 gtgctgatca tttctggttt ggtcatacac cgttgcgaca tcgcgtggat attggcaacc
     1081 tgcattatat tgataccggt gctgtctttg ggggcgaact gactcttgtg caattgcaat
     1141 gattaaaaat caccgtactc ctgtgcaggt cgccagaaac catctataaa atcctcaatc
     1201 ggaaaacaac cgccctggcg gatccgttga tcgctcatag aataaagaca ctgctgttcc
     1261 gtgttgtaga catccacaac aatatcttca caaccgccat ccaggtagca aacaaaaagt
     1321 accagcgcga acatttcatc cccgaagtgt ggtgccgtac cgttaagttt aggagagatt
     1381 ttacaacggg ggaataacca ggacaaataa cccgccatgc cgacgggttc tttttggatc
     1441 aggcaagacg cataatccag gcatcagatt gttgatcgta acgggtacgg taaaggacag
     1501 agtgttcgcc atttagcagg gcagggatac tggtttcagc atcccaggca tcgagttgca
     1561 tacataaatc ggggtcagat ttacaaggaa tggttaacgt tcgatcaccc ggcgattcac
     1621 cgtgtaattc gccgtcgtcg atttcaaaag cgcctatgcg cacactggtt ttcatcttcg
     1681 tgctctccat ttagctgccg gttgtggtac gaccagtccg atcgcaccat ttttcagcct
     1741 agttgaggca gccgaatgtg ccagtcaaaa agtgcgcttt ttttgtgcgc tgtcaggcgt
     1801 taccggtaaa aagtttccca tcgcgcacca gttcacgcgg atagctgttt ttcaatcgcg
     1861 aaccaatccg tttggctaaa ccaatcggtt gatgctggaa agtaaccaac acgtcatccg
     1921 ccactggcgc ggcttgcggg taaacatcgc gcccgcgata ccactcctcc gcttcctgcg
     1981 gtgtcagttc aaaagcgttc acattgtcgg gggtggcaag ggcaataact gcttcatgct
     2041 gccagcgata acctttgttg tgcgtttcgg caagtttaat ccccaagcga gaaaatcgga
     2101 ctttaccgat cagggcttca atgcccaccg ggaacaacca cagttctttg tcacgctgcc
     2161 agaggcgcag gttttcatcc cagtttaagc caacacctgc agccgcctgg cgaatttgtc
     2221 cagcttcgcg atctttcacc gggctgaacg gaaaattacc gactttgtat ttgggggcgg
     2281 gtaaggcggg aatcgcctga gttttacgca gacgagcaac gaagaagcct tcgcagtcgt
     2341 aaatttgtgg gaaaacatgc aaaaagcctt cttcggtcag cgctttgttt gcaccaggga
     2401 agagatcgcc aagtggtaaa aactctactg cgtcggggta agtctctttc agccacaggc
     2461 aaacggcttc gttttcttcc tggtttaagg tacaggtcga gtaaaccagc gtaccaccag
     2521 gacgtaatgc atgaaaggcg ctgtcgataa gctcccgttg tgtagctgcg atttcctgat
     2581 tgctttctgg tgaccagttt tttagcgcat cgggatcttt acgcaccacg ccttcgccgg
     2641 agcagggagc gtccagcaaa atggcatcaa acatttctgg cactgccgca ccaaacacgc
     2701 ggccatcaaa atgtgtgagc gcaacattac tgatgccaca gcggctgata ttggcatgta
     2761 acacttttac ccgactggcg gaaaactcat tggcaaggat tgccccttcg ttattcatcc
     2821 gcgcggcaat ttgcgtcgtt tttgagcctg gcgcagcagc gacatccatc acccgctgtg
     2881 gtgcattacc gtcagcaaac aaggcggcga cgggcaacat tgaactggct tcctgaatat
     2941 aaaacaggcc acttaaatgc tcggcggtac tacccaatgg caatgcatct tcattgtcgc
     3001 gttcaatcca gaaaccttct tcacaccacg gaattggcgt aagcgtccag ccataaggag
     3061 cggttaattg caggaaatca gcaacggaga ttttcagcgt attaacgcga atgctgcggc
     3121 gcaacgggcg ctgacaggcg gcaagaaaat catcaaatga gagcgtcgaa ggcatagctt
     3181 cgcgcatttg tgtcagaaac gcgtccggga aataaacggt gtgttgggcc acgagcatgt
     3241 accactggca aaaaaacagg cgcgcagttt agcataaacg ctccggcgca ggcacgccgg
     3301 agcagtgggc attatttggg aagcgcagtt ccccattcac gccactcttt cggttcactt
     3361 tcctgcaaca ggaagtgttt gccttcctgg gctttcggtg ccagtggcgt acccggaggc
     3421 gtggcgaagg cgatgccgcc acggataaac tggttaaagg tgccggtttt cactacgccg
     3481 cccgtcagac caaagtccag actgtaaccc gatgccaacc agaagacgga attgttacgc
     3541 accaggtgtt gatagcgttt actgatgcgc atcgcaatca tcacgcgatc tgacaatgtc
     3601 cccagcgtca ttccggtaac cgtacctact tccagaccac ggaacagcac aggcgtacca
     3661 atacctaacg aaccggcttc cggtgcttcg acaataatgc ttaagccatc caggtaacgc
     3721 gaatcagtaa tagtagcttc ttgcaactca aagtcacggc gaggattacc ccgacctggt
     3781 tcgacattga tatacggctg gaggatagta tctagatgct caacgcccgt ggctgaaatt
     3841 tgcggtgtga ccaccgagaa gcgcgtaccg ccgcgggcga aggtctggac atactccgga
     3901 tagagcaccg cctttgcctg tacttcattg cgcgcggtaa tcagatccag cgtctggatt
     3961 tgcccgatat caataccgag atagcgaatt ggcatcccga ccgccagttt tccggcatcg
     4021 aaagcgtgaa gcgtaatctg cccactaacc gcacgggccg ctgtttcgga agcatacaga
     4081 attcgtttgt cgcctttacg ctgactggcg ctggcaccgc tgaggttatc gaagctaatg
     4141 gctcccttta atgctctgga gagcggggat gcctgtacgg tcaggccact accattcagc
     4201 tgaactttcg ccccgccttc tgcccagaac acgctattgc tggtcagaag gttgcgatac
     4261 tccggcttaa tatgcagatc gatatcaaac gcgttagctc gcggacgcac ggtaatcact
     4321 tcaccaactt caaatttacg gtacagcact accgatcctg cctgcacatc cggcagcgtc
     4381 tctgcactca aactcacggt tgtggtgggt aaatcgctaa ggctgttctc cagcgctttt
     4441 tccagattgg catacagtgg atagctggct ttcatctcac ctttatcgcc tggcagaata
     4501 cgtatcccgc cgttaatcca ttctgaggcg ctggcaccaa gaaactcaac gccatccagc
     4561 cccaccttca cgtcgacacg gctgttgacg acaaatttgc tatcgccttt taccagttcg
     4621 cgatgctgag gctcgatggc gacggtaaag gtaacgcctt tgctggtgag tttacgatca
     4681 ataacctggc ctacctgcac gccgtgaaga atgagcggct gacccgtatc aataccgtaa
     4741 ctttccggcg cggtcagggt cagcgtcaga acatcaggtt catgcagcag tgctttttcg
     4801 cctggcacaa caacgaactc tttgcgtggc tcgccatcgc cgggtaccaa ctcgaaggtt
     4861 ttgccagtca gcagggcgct gagattggca tcgctaaggg ataatttcgg attacgtaat
     4921 tcgatgcggg tattttcacg aagcagggta acgacgctgg gatcaactgt catttcccca
     4981 gtgactttac caccaggatt taaatccagt ttagttagct gtccgacttc cagtccctga
     5041 tacattaatg gcgtcgagtc ggcggttaat ccggccccac tcggcagttc cagtttgatt
     5101 attacgccac gctggctatg ggcgaggtct tcatacagac caaaggtatc ttccgcctcg
     5161 gcaggtttcg actcttctgg tgaatcgaag gcaatcgcac cgttaaccag tgccgccagg
     5221 ctttccagtt tcaccttcgc gccactgata ctgacattgg catcaacgcc ggaaacgttc
     5281 cagaaacggc tacctttttt caccagatcg gtaaaacgcc gctcgatcag gacatcaatc
     5341 accacgcctt gtttgttggg attgatggca tagtcgtaga cttttcccac cgggatcttg
     5401 cggaaataga ccaatgaacc gctgttcagc gaaccgagat cgggggcttg caggtggatc
     5461 atcagatcgc cattgttcag ccgatatttc ggttgggtat cgagtgcgac aaagtgatcc
     5521 tgctctttac ctgtacccgg catcatgccg atatagttcc caccgacgag ggcgtccagc
     5581 ccggagacac ctgccaacga tgcttttggc gtcaccagcc agaattgagt ctcttcgcgc
     5641 agcgcatctt tcatatcgga cttgatgctg accttgactt caatcttacg aagatcgtcg
     5701 ctgaggctga tatcctgcac tgttccgact tcaacgccct gataacgaac aggcgtacgg
     5761 cccgggacaa taccatccgc cgacataaag tcgatggtga cggtattact tcggtcctga
     5821 taactgtccc aaatcagcca accggcaatc attagcgcga tgaaaggcag cagccagaaa
     5881 ggtgagatac ggcgtttatt tttaatctgc gcttcagtcg tcgaagcggg cgtttcctga
     5941 ctcatgtgca tcccaaagta agcggctgtc cagccattcc acagcaagaa tagtcaaaat
     6001 tacggctgcg ccaaaataaa acgcagccgg tcccatagta aaagcgagga tctgatcgcg
     6061 attaatcagc gacatggtta aagatatgac aaacaggtcg agcatcgacc agcgtccaat
     6121 ccaggtcacc atccgcagta acagaatgcg tgtgcgtaaa ccttgctggc atttaaaatg
     6181 aatgctcaac agtaaagtga acatgacgat cactttagta aacggtacca gaatactggc
     6241 gataaacacg attccggcga ccgcaatgtt gctacttgcc agcgacataa tcccggaaag
     6301 aatcgtatct tcctgccggc caccattcag ataaatgata gaaataggca ataggttggc
     6361 tggtaacaac aaaacgattg acgctaacag cgccgcccag catttttgca aactatgacg
     6421 acgacgcagg cgtagcggga tatggcaacg cgggcagcga ccacgctgat caggatagcc
     6481 ggtaaaatgg cacccaagac agacacgaag tttctcgtcc ctacgcgtag cggggcgctg
     6541 cggataatat cgctcccaca gctcctcaac attaagatgt gacaacgtca ccgtcgttaa
     6601 aatcaccaac gccacaaaag agaacaagcc gacacccgcc tggatatggg cataatcctg
     6661 tacctttata gaagcaacgc caatgccgac caggtagata tccagcatta cccactcttt
     6721 aagacgctca agcatcagca gtaccggacg taaattcatt cccagtcggt taccaaacca
     6781 taaatatgct atggaggaca ccagaatgag gggggcacca ataacgcaga aaaagaccat
     6841 cgcccccgtt atcgtatcgc cctgtttggt catttgccag atgccttgca tgacgtttgc
     6901 gtcgatacga atacctaaca gccagatatg caacagcggt tcgccccagg caaacggcat
     6961 cagcaacagc atggtgaaag ccattgccgc caggcgcgtt agcgaccagt cgcgcccgtc
     7021 gcgaattttt gcctgacagc gcggacaata ggcactctga tgagaattta tctcgggcag
     7081 gctaaacagc atgtcacatt gcgggcaacg ttggtaatca ccacgcggca gttcctcgcc
     7141 gattgacctc actgttatct tttttgtcgg cgtaatttgt ggtgtgttaa gagccatgac
     7201 gtgccaaatg taataagaat taacattaat cttaacccat gatgggaatg atcttgagca
     7261 ttaacgcatt taatgcttat tttaataggc tggcagttcc aggtaagaca aacaagtgat
     7321 tatataatga acaaaacaga attttacgcg gatttaaatc gcgactttaa cgcgctgatg
     7381 gcgggagaaa ccagttttct ggcaacgctt gcgaacacca gtgcgttgtt atacgagcgt
     7441 ctcactgacg taaactgggc aggtttttat ttgcttgagg acgatacact ggtactcgga
     7501 ccatttcagg gcaaaattgc ctgtgtccgg atacccgtcg ggcgcggggt gtgcggcact
     7561 gcggttgccc gcaatcaagt gcagcgtatc gaggatgttc acgcgtttga cgggcatatt
     7621 gcctgtgatg cggcgagtaa ttctgaaatt gttctgccgc tggtggtgaa aaatcagatt
     7681 attggtgttc ttgacatcga tagtaccgtc ttcggtcgct ttacagacga ggacgagcaa
     7741 ggcttacgtc agcttgtggc acagcttgaa aaagtgcttg caacgacgga ttacaaaaaa
     7801 ttctttgcga gcgtcgcagg ataatcaacg gataacgtag catttactgg tagcgtcatt
     7861 ataatgacgc ctgttcatgc ctgcgcttgt tggctacgtc cgttgtaatc aggaaatttc
     7921 atggaaaatc aacctaagtt gaatagcagt aaagaagtaa tcgcgtttct ggccgaacgt
     7981 tttccccact gtttcagtgc ggaaggtgaa gcgcgtccgc tgaaaatcgg tatttttcag
     8041 gatttggtcg atcgtgttgc cggggaaatg aacctgagca aaacgcaatt acgatccgct
     8101 ttacgtctct acacttcgag ctggcgttat ctttacggtg ttaaacccgg cgcaacgcgt
     8161 gtcgatcttg acggcaaccc atgcggtgag ctggacgagc aacatgtaga gcatgctcgc
     8221 aagcagcttg aagaagcgaa agcgcgtgtt caggcacagc gtgctgaaca gcaagcgaaa
     8281 aaacgcgaag ctgccgcagc tgctggtgag aaagaagacg caccgcgccg cgaacgcaag
     8341 ccacgtccga ccacgccacg ccgcaaagaa ggcgctgaac gtaaacctcg tgcgcaaaag
     8401 ccggtagaga aagcgccaaa aacagtaaaa gcacctcgcg aagaacagca caccccggtt
     8461 tctgacattt cagctctgac tgtcggacaa gctctgaagg tgaaagcggg tcaaaacgcg
     8521 atggatgcca ccgtattaga aatcaccaaa gacggcgtcc gcgtccagct gaattcgggt
     8581 atgtctttga ttgtgcgcgc agaacacctg gtgttctgaa acggaggccg ggccaggcat
     8641 gaacatgttt tttaggctta ccgcgttagc tggcctgctt gcaatagcag gccagacctt
     8701 cgctgtagaa gatatcacgc gtgctgatca aattccggta ttaaaggaag agacgcagca
     8761 tgcgacggta agtgagcgcg taacgtcgcg cttcacccgt tctcattatc gccagttcga
     8821 cctcgatcag gcattttcgg ccaaaatctt tgaccgctac ctgaatctgc tcgattacag
     8881 ccacaacgtg ctgctggcaa gcgatgttga acagttcgcg aaaaagaaaa ccgagttagg
     8941 cgatgaactg cgttcaggca aactcgacgt tttctacgat ctctacaatc tggcgcaaaa
     9001 gcgccgtttt gagcgttacc agtacgcttt gtcggtactg gaaaagccga tggatttcac
     9061 cggcaacgac acttataacc ttgaccgcag caaagcgccc tggccgaaaa acgaggctga
     9121 gttgaacgcg ctgtgggaca gtaaagtcaa attcgacgag ttaagcctga agctggcagg
     9181 aaaaacggat aaagaaattc gtgaaaccct gacacgccgc tacaaatttg ccattcgtcg
     9241 tctggcgcaa accaacagcg aagatgtttt ctcgctggca atgacggcgt ttgcgcgtga
     9301 aatcgacccg cataccaact atctttcccc gcgtaatacc gaacagttca acactgaaat
     9361 gagtttgtcg ctggaaggta ttggcgcagt gctgcaaatg gatgatgact acaccgttat
     9421 caattcgatg gtggcaggtg gtccggcagc gaagagtaaa gctatcagcg ttggtgacaa
     9481 aattgtcggt gttggtcaaa caggcaagcc gatggttgac gtgattggct ggcgtcttga
     9541 tgatgtggtt gccttaatta aagggccgaa gggcagtaaa gttcgtctgg aaattttacc
     9601 tgctggtaaa gggaccaaga cccgcactgt aacattgacc cgtgaacgta ttcgtctcga
     9661 agaccgcgcg gttaaaatgt cggtgaagac cgtcggtaaa gagaaagtcg gcgtgctgga
     9721 tattccgggc ttctatgtgg gtttgacaga cgatgtcaaa gttcaactgc agaaactgga
     9781 aaaacagaat gtcagcagtg tgatcatcga cctgcgtagc aatggcggtg gggcgttgac
     9841 tgaagcggta tcgctctcag gtctgtttat tcctgcgggt cccattgttc aggtccgcga
     9901 taacaacggc aaggttcgtg aagacagcga taccgacggg caggtgttct ataaaggccc
     9961 gctggtggta ctggttgacc gtttcagtgc ttcggcttca gaaatctttg ccgcggcaat
    10021 gcaggattac ggtcgtgcgc tggttgtggg tgaaccgacg tttggtaaag gcaccgttca
    10081 gcaataccgt tcattgaacc gtatttacga tcagatgtta cgtcctgaat ggccagcgct
    10141 gggttctgtg cagtacacga tccagaaatt ctatcgcgtt aacggcggca gtacgcaacg
    10201 taaaggcgta acgccagaca tcatcatgcc gacgggtaat gaagaaacgg aaacgggtga
    10261 gaaattcgaa gataacgcgc tgccgtggga tagcattgat gccgcgactt atgtgaaatc
    10321 aggcgattta acggcctttg ggccggagct gctgaaggaa cataatgcgc gtatcgcgaa
    10381 agatcctgag ttccagaaca tcatgaagga tatcgcgcgc ttcaacgcta tgaaggacaa
    10441 gcgcaatatc gtttctctga actacgctgt gcgtgagaaa gagaataatg aagatgatgc
    10501 gacgcgtctg gcgcgtttga acgaacgctt taaacgcgaa ggtaaaccgg agttgaagaa
    10561 gctggatgat ctaccgaaag attaccaaga gccggatcct tatctggatg agacggtgaa
    10621 tatcgcactc gatctggcga agcttgaaaa agccagaccc gcggaacaac ccgctcccgt
    10681 caagtaatat caatcaggca caagaaattg tgcctgattt tttaacagcg gcaagatgcc
    10741 gtaaatcaga tgctacaaaa tgtaaagttg tgtctttctg gtgacttacg cactatccag
    10801 acttgaaaat agtcgcgtaa cccatacgat gtgggtatcg catattgcgt tttgttaaac
    10861 tgaggtaaaa agaaaattat gatgcgaatc gcgctcttcc tgctaacgaa cctggccgta
    10921 atggtcgttt tcgggctggt actgagcctg acagggatac agtcgagcag cgttcagggg
    10981 ctgatgatca tggccttgct gttcggtttt ggtggttcct tcgtttcgct tctgatgtcc
    11041 aaatggatgg cattacgatc tgttggcggg gaagtgatcg agcaaccgcg taacgaaagg
    11101 gaacgttggc tggtcaatac tgtagcaacc caggctcgtc aggcagggat cgctatgccg
    11161 caagtggcta tctaccatgc gccggacatc aacgcttttg caaccggtgc gcgccgtgat
    11221 gcctctctgg ttgctgtcag caccggtttg ctgcagaaca tgagcccgga tgaagccgag
    11281 gcggtaattg ctcacgaaat cagccacatc gccaatggtg atatggtcac catgacgctg
    11341 attcagggcg tggtgaacac cttcgttatc tttatttccc gtattctggc gcagcttgcc
    11401 gcgggtttta tgggcggaaa tcgtgatgaa ggtgaagaga gcaacggcaa cccgctgatc
    11461 tactttgcgg ttgcaacggt tctggaactg gtgtttggta ttctggcgag cattatcacc
    11521 atgtggttct cgcgtcatcg tgaattccat gctgatgccg gttcggcaaa actggttggt
    11581 cgcgagaaaa tgattgccgc gctgcagcgc ctgaaaacca gctatgaacc gcaagaagca
    11641 accagcatga tggctttctg cattaatggt aagtcgaaat cgctcagtga gttgttcatg
    11701 actcacccgc cgctggataa acgaattgaa gctctgcgta cgggtgaata cctgaagtaa
    11761 tatgaagtaa atactaaaaa gtgcgtcctg atcga
//
LOCUS       DADKRT010000135        11575 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.136, whole genome shotgun sequence.
ACCESSION   DADKRT010000135 DADKRT010000000
VERSION     DADKRT010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11575
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.136"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..985)
                     /locus_tag="JQ356_003072"
     CDS             complement(<1..985)
                     /locus_tag="JQ356_003072"
                     /EC_number="3.4.21.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310582.1"
                     /note="PtrB; oligopeptidase that cleaves peptide bonds
                     following arginine and lysine residues; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
                     /protein_id="HAY4623092.1"
                     /translation="MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQEN
                     SYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQS
                     AFSEEWDEWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNL
                     ETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYE
                     EKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLD
                     HYQHRFYLRSNRHGKNFGLYRTRLRDEQQWEELIPPRENIMLEGFTLFTDWL"
     gene            complement(1194..1853)
                     /locus_tag="JQ356_003073"
     CDS             complement(1194..1853)
                     /locus_tag="JQ356_003073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HAY4623093.1"
                     /translation="MANWLNQLQSLLGQSSSSISSSADQGLGKLLVPGALGGLAGLLV
                     ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT
                     ERLILALVFAAKSDGHIDAKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATG
                     VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLA
                     E"
     gene            complement(2180..2536)
                     /gene="yebF"
                     /locus_tag="JQ356_003074"
     CDS             complement(2180..2536)
                     /gene="yebF"
                     /locus_tag="JQ356_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310584.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YebF"
                     /protein_id="HAY4623094.1"
                     /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
                     ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
                     QVSVDCKAGMAEYQRR"
     gene            complement(2603..2897)
                     /gene="yebG"
                     /locus_tag="JQ356_003075"
                     /pseudo
     CDS             complement(2603..2897)
                     /gene="yebG"
                     /locus_tag="JQ356_003075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310585.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein YebG"
     gene            3031..4209
                     /gene="purT"
                     /locus_tag="JQ356_003076"
     CDS             3031..4209
                     /gene="purT"
                     /locus_tag="JQ356_003076"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HAY4623095.1"
                     /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
                     ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVV
                     PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSS
                     SGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCSDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN
                     VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG
                     "
     gene            complement(4265..4906)
                     /locus_tag="JQ356_003077"
     CDS             complement(4265..4906)
                     /locus_tag="JQ356_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HAY4623096.1"
                     /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
                     EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
                     AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
                     TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
     gene            complement(4943..6754)
                     /gene="edd"
                     /locus_tag="JQ356_003078"
     CDS             complement(4943..6754)
                     /gene="edd"
                     /locus_tag="JQ356_003078"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020244583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HAY4623097.1"
                     /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQSPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
                     PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA
                     RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL
                     DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
                     FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRRFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
                     PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
     gene            complement(6989..8464)
                     /gene="zwf"
                     /locus_tag="JQ356_003079"
     CDS             complement(6989..8464)
                     /gene="zwf"
                     /locus_tag="JQ356_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HAY4623098.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR
                     IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
                     GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
                     DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            8801..9670
                     /locus_tag="JQ356_003080"
     CDS             8801..9670
                     /locus_tag="JQ356_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HAY4623099.1"
                     /translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEA
                     NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA
                     MATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS
                     DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE
                     ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
                     RFDKQLLNLSDDR"
     gene            9798..11240
                     /locus_tag="JQ356_003081"
     CDS             9798..11240
                     /locus_tag="JQ356_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase II"
                     /protein_id="HAY4623100.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY
                     LMSGDLVIVTQGDVMSTVGSTNTTRILTVE"
     gene            complement(11300..11518)
                     /locus_tag="JQ356_003082"
     CDS             complement(11300..11518)
                     /locus_tag="JQ356_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623101.1"
                     /translation="MEYQADYYITINDSIKTWVQTQYSKDSGLPMAVIGHSVAEEAGM
                     RRLASYLDLHSGYPCIHFTGGCDYDWIE"
BASE COUNT         2800 a         2981 c         2895 g         2899 t
ORIGIN      
        1 ccagccagtc ggtaaacagc gtaaaccctt ccagcatgat gttttcgcgt ggcggaatta
       61 actcttccca ctgttgctca tcacgcaggc gggtacggta taagccaaag tttttgccgt
      121 ggcggttgga acgcagataa aaccgatgct ggtagtgatc aaggctgtat tcgtgatctt
      181 tgcggcgcgg cagaaaaaca aacggctcgg catcggccat ttccgcgtcc agcaggcgaa
      241 cttcactggt ggtggcgctg gccaaatgaa tgactacata gtgcttcgag gtcgttttat
      301 gcaggctgac gtaataggta tcgtcttttt cttcgtagat cagtttatct tgcgatgctg
      361 gcgtaccgat ggcgtgacgc cagacctgat aaggcagcag cgtcaccgga tgcttgcgaa
      421 catagtagaa agtccaggag tcatttgccc agacaaagct gggttcaacg ttatccagca
      481 gttccgggta ccagttacca gtttccagat tacgaaaacg aatgccgtac tggcgtcggg
      541 aaagaaaatc ttctgccagc gccataatgg tgttatcggg cgtaatcgcc attccgccca
      601 tcgaataaaa ctcactatga gctgcgcgct tattggcatc gagcaatgtt tcccactcat
      661 cccactcttc actgaatgcc gattgacgct ggtagatagc atattcacag cctggttcat
      721 aaatatgccg atagcggtag ccatttttga tgtagggcgc agaaacttct cgttgcggaa
      781 tgcggtcgat gatttccttt aagatgcgat cctgcaaggc ttgttgtgag gccatcaccc
      841 gatgaccgta actattttct tgttgcaggt agtccaggac ttctggctga gaacgcgtat
      901 cgtcccgcag ccagtagtaa ttatcgatgc gcgtatcgcc atgaagcgtc atggcgtggg
      961 gaatgcgggc ggcttttggt agcatgttat tgttctttct ggttgaaaca tcttataagg
     1021 gtggcaaaac tcaccgggga tgcaagcgaa acaggggagt cattgcttag atgatgacag
     1081 gtaatggcgc ggatatcgaa tgttatgcag acagagaaaa tcagcctgtt caaatggctg
     1141 tgcgattctg gatagcccga aatagtcaac ttcaggctat ccagagagcg gaattattcc
     1201 gccaaagtgc gtttttgctg ttcgagatcg cgttcaatgc cgtcacgaac atcctggggg
     1261 attttcagcg cgtcacccag tgcattcagg taactgcgtt ccataaaatg gtcaatatca
     1321 atagccgcgc aactcaggaa atagatttcc agcgcctctt cttcattgcg gaccccggta
     1381 gccaagcgtt gtggatccag cggttgttcg attgcctgct caatgagtac acgcccctgc
     1441 tcttccacgc cggcttcacg caattgctgg tcgattgccg cacgttcttt ggcatcaata
     1501 tgaccatcac ttttagcggc aaagaccagc gcaaggatca aacgttctgt acgctcatcc
     1561 agcggcgtac tttgcgcgcc aaactgcggt tcgtcctgat gcgccgcgcg aattttatct
     1621 ttgtatttat tccacagcac cgtacccgct accgctccgc cgccaaccag taacgcgttg
     1681 gtgccatatt tcgtaagaag tttacgtgct gatttatttg cgaccagcag cccagccagt
     1741 ccgcctaatg cgcctggcac taacagtttg cccaatccct gatccgcaga cgaggagata
     1801 gaagaactgc tttgcccaag cagggattgc agttgattta accagttagc catatttgct
     1861 cctcaataac catttttagt gcctgtagca tagcggatga ggatgtcaga aaatgtatat
     1921 cgagacaaaa gatgcgcaaa taagcggggc ggtaggccgt tattcaaaga aattcgcgcc
     1981 aggtaaggta tttactgtat atcaggtgat aagggtattt taggtgaaag tagtttgtcg
     2041 ttttgagtgg cattgtttga tgctgattgc ccgatgcgac gctgttgcgt cttctcaggc
     2101 ctacgattgt ggtgcgttct ggggcggaca aggcactcgc gccgcatccg ccaacggtca
     2161 atcgaattat cagaagccat taacgccgct gatattccgc cattcccgct ttgcagtcca
     2221 cgctgacctg gtaatgaata tcggcacttt taccacgcac ggttagcggt actgaccatt
     2281 tatcatcttt accctgaatg tcctgcaaac tgacccaagc cacgggatcg gcctgaccga
     2341 caattttttg atcatctgcc caacgcgcca cgcgattttg ttgataatca cgttttacgc
     2401 tcgcggcaat tccggcagca tccagacctt cacactttgg gaaagtgacc gacttgctgg
     2461 tttcattatt ggcagcgaaa actgatgcgc aggcagaaac caacaacagc cctaaaaacg
     2521 cccctctttt tttcatgttt ttctccatag cacaatgatt caggagaaag catggtacaa
     2581 attgtcagga gcgcaagttg cttcaggccg cgtgtgaggc atcttcctct tcggattcag
     2641 caccgacgac ctgtgggtgg ggacggtaat ttgccggttt tcagaatggt gctcagcaca
     2701 tctttttgtt ctgccagcca tagcgaaagg gcttcacgtt gctcgtcttc catttgcact
     2761 ggagaattag tcagccaggt gtcaagcaga tccgccgtat caagcatttt gtcataagca
     2821 tcggcttcct ttttgctggt aaacgacatt ttctcttcgc cctcacgaat gactacgtat
     2881 ttaacttcaa ccgccatttg cagcctctca taataactgt gattttatac agtgtatttc
     2941 ttttcggttg agaaatcaaa atcaacaata aagacacacg caaacgtttt cgtttatact
     3001 gcgcgcggaa ttaatcaggg gatattcgtt atgacgttat taggcactgc gctgcgtccg
     3061 gcagcaactc gcgtgatgtt attaggctcc ggtgaactgg gtaaagaagt ggcaatcgag
     3121 tgtcagcgtc tcggcgtaga ggtgattgcc gtcgatcgct atgccgacgc accagccatg
     3181 catgtcgcgc atcgctccca tgtcattaat atgcttgatg gtgatgcatt acgccgtgtg
     3241 gttgaactgg aaaaaccaca ttatatcgtg ccggagatcg aagctattgc caccgatatg
     3301 ctgatccaac ttgaagagga aggactgaat gttgtcccct gcgctcgcgc aacgaaatta
     3361 acgatgaatc gcgagggtat ccgtcgcctg gcggcagaag agctgcagct gcccacttcc
     3421 acttatcgtt ttgccgatag cgaaagcctt ttccgcgagg cggttgctga cattggctat
     3481 ccctgcattg taaaaccggt gatgagctct tccggcaagg ggcagacgtt tattcgttct
     3541 gcagagcaac ttgctcaggc atggaagtac gctcagcaag gcggtcgcgc cggagcgggc
     3601 cgcgtaattg ttgaaggcgt cgttaagttt gacttcgaaa ttaccttgct aaccgtcagc
     3661 gcggtggatg gcgtccattt ctgtgcaccg gtaggtcatc gccaggaaga tggcgactac
     3721 cgtgaatcct ggcaaccaca gcaaatgagc ccgcttgccc ttgaacgtgc gcaggagatt
     3781 gcccgtaaag tggtgctggc actgggcggt tatggtctgt ttggtgtcga gctgtttgtc
     3841 tgtagtgatg aggtgatttt cagtgaggtc tcccctcgtc cacatgatac cgggatggtg
     3901 acgttaattt ctcaagatct ttcagagttt gccctgcatg tacgtgcctt cctcggactt
     3961 ccggttggcg ggatccgtca gtatggtcct gcagcttctg ccgttattct gccacaactg
     4021 accagtcaga atgtcacgtt tgataatgtg cagaatgccg taggcgcaga tttgcagatt
     4081 cgtttatttg gtaagccgga aattgatggc agccgtcgtc tgggtgttgc gctggcgacc
     4141 gctgagagtg ttgttgacgc cattgaacgc gcgaagcacg ccgccggaca ggtaaaagta
     4201 cagggttaaa cccggcaaaa aaacgctaca aaaatgcccg atcgtagatc gggcgttttg
     4261 acttttacag cttagcgcct tctacagctt cacgcgccag cttagtaatg cggtcgtaat
     4321 cgcccgcttc cagcgcatct gccggaacca gccaggaacc accgatgcac agcacgcttt
     4381 tcagcgccag gtagtcacgg tagttagccg gagaaatacc acccgtcggg cagaaacgga
     4441 cctgggagaa cggacccgcg atcgcctgca gggctttcac gccgccgtta gcttcagccg
     4501 ggaagaattt gaactctttc aaaccgtagt ccatacccag catcagttcg gaaacagtgc
     4561 tgatccccgg aattagagga atagtccctt cggtagcagc tttcagcagc ggctcggtca
     4621 gacccgggct aattgcgaac tgtgcacccg cttcagtgac ttctgccagc tgctgtggat
     4681 tcagcaccgt accggcaccc acaatcgctt caggcacttc tttggcgata gcacggatag
     4741 cgtcaactgc acactcggta cgcagagtca cttccagaac gcgcacccca ccagcaacca
     4801 acgcttttgc catcggcact gcgtgttcca gtttttttac cacgataacc ggtacaaccg
     4861 ggccggtggt caggattgat tctgcacttg ttttccagtt tttcatcaga gttttctctc
     4921 gcctgattac aaatttgtcg tcttaaaaag tgatacaggt tgcgccctgt tcggcaccgg
     4981 acagtttttc acgcaaggcg ctgaataatt cacgtcctgt ccccacgcgt gacgcgctca
     5041 ggtcaggaat gtgcggttcg cgagcagcca gttccgcttc gtctaccagc agcgtcagtt
     5101 cgcctgtctg tccattcaca cgaatgatgt ccccgtcgcg cacttttgcc agcagcccgc
     5161 catcgtaggc ttctggtgtt acgtggatag ctgacggcac tttacctgaa gcgccggaga
     5221 gtcgtccatc ggtaactaac gcaattttga aacgccggtc caataataca ccaagtggcg
     5281 gcatgagttt atgtaattct ggcattccgt tcgcttttgg cccctgatga cggacaacaa
     5341 cgacacaatc gcggtccagc aaacccgctt caaaggccgg cataacgtca tgctggcttt
     5401 caaaaacaac cgctggcgct tcaatcacct ggttctcaac cggcacggca gaggttttca
     5461 taaccgcacg gcccaggtta ccgcttaaca cttttgtccc accatgatga gagaaaggtt
     5521 gttcgaagga agcgatcaca ttgctgtcga gtgatttttc cgccccttcc cgccagtcca
     5581 gttcaccatt attcagccat ggttcaaggg tataacgaga cagaccaaag cctgccaccg
     5641 tattgacatc ttcatgcagc aggcctgctt tgagcagttc acgcaccaga accggtacgc
     5701 cacctgccgc ctggaagtgg ttaatatcgg ccggaccgtt cgggtagaga cgtgccatca
     5761 gcggtacaac atcagaaagg tcagagaagt catcccagtt aatctgaata ccggccgcgc
     5821 gcgccatcgc caccaggtgc atggtgtggt tagtggaacc accggtcgcc agcagtgcaa
     5881 cgataccgtt caccaccact ttctcatcga tcatcttacc gatcggcatc cattcattac
     5941 cattaccggt catgcgtgta acctgacgcg cagcggcagc ggtcaaagca tcgcgcagcg
     6001 gagaatccgg atgaacaaaa gaagagcctg gcgactgcat ccccataaat tccaccacca
     6061 tctggttggt gttggcagta ccgtagaaag tacatgttcc cggcgcatgg taagacgcgg
     6121 cttctgactc cagtaaggcc atgcggtcca ctttaccttc ggcataaagc tggcgaatac
     6181 gcactttttc tttatttggc aaaccgcttg ccatcggtcc agacggcaca aacaccgcag
     6241 gcaaatgacc aaacgacagg gctgccatcg tcagacccgg gacaatcttg tcgcacacac
     6301 cgaggaacag agcaccatca aacatgttat gggacagccc caccgccgca gacatcgcta
     6361 tcacttcgcg gcttagcagc gacaattcca ttccatcctg cccctgggtg acaccatcac
     6421 acatcgccgg aacaccgccc gcaacctgac caaccgcatt cgcttcatgc agggctttac
     6481 gaatgatttc tggatagtgt tcataaggct ggtgcgcgga gagcatgtcg ttataggagg
     6541 tgatgatggc gatattgtta cgcaacatgc ttttcaaaga ggctttgtct tctggctggc
     6601 aggcagcgaa accgtgtgcc aggttaccgc atgccaactg cgaacgatga acggtcgacg
     6661 ttttcgcttg ttctatccgg gcgagataag cagagcgagt ctcgcgcgaa cgttcaatga
     6721 ttcgatttgt tacgcgtaac aattgtggat tcataaaggc tcctgaaatt gagttgtcag
     6781 agcaggatga ttcacaacgc gtttcattca gaggatttat gagtgaaacg cctgtaaccg
     6841 gagctcatag ggcaaaaacg tttcagtcag tgtaataaaa aaagcctcgt gggtgaatcc
     6901 gcacgaggcc tgaaagtgta aaaattgttc tacaatctgt gcaagatcat gttaccggta
     6961 aaataaccat aaaggataag cgcagatatt actcaaactc attccaggaa cgaccatcac
     7021 gggtaatcat cgccaccgag gcaacgggtc cccaggttcc ggcctgatac ggtttcggcg
     7081 catcattgtc catcgcccac gcctcagtaa tggagtctac ccatttccag gcttcttcca
     7141 cttcatcacg acgtacaaac agtgcctgaa taccacgcat ggtttccagc agcagacgtt
     7201 cataggcatc cgccagatgc gtctgattaa aggtttctga atagctcaga tccagcttgg
     7261 tgatttgcag gttatgtttg tggtcaaggc caggaacttt attcagtacc tggatatcca
     7321 cgccttcatc aggttgcaga cggatagtca gtttattctg cggcagatcc tgccacgact
     7381 ctttaaacag attcagttca ggtgttttga aatagaccac gacttcagaa catttggtcg
     7441 gcagacgttt accagtacgc aggtagaatg gcacaccggc ccagcgccag ttatcaatgt
     7501 cgacgcggat cgccacgaag gtttctgtat tgctgctctt gttcgcaccc tcttcttcca
     7561 gatatcccgg cacttttttg ccctgggcga agcccgcagt atattgccca cgtacggttt
     7621 tttcgcgtac gttggagcgg tcgatgcggc gcagggactt cagtactttc actttttcat
     7681 cgcggatgct gtctgcgctc aggtcagatg gcggagacat cgcaatcatg cagagaattt
     7741 gtagcaggtg gttctgaatc atgtcacgca tctgaccggc tttatcaaaa tagccccagc
     7801 gcccttcgat ccccacttct tctgccacgg taatctcaac atgatcaatg gtgcgattgt
     7861 cccagttatt cacaaacagg gagttagcaa aacgcagcgc caacaggttc agcaccgttt
     7921 ctttaccaag atagtggtcg atacggtaaa cctggcactc ctcgaagtat tcgccaacct
     7981 gatcattgat ttcctgcgag gtcgccagcg acgtccccag cggtttctcc atgactacgc
     8041 gtgccggttt agcattcagt tttgcctcgc caagcccttt gcaaattgcg ccaaaagtgc
     8101 tgggcggcat ggcaaagtag ttaatggtga tacgattttt ttgatccagc atcgcgccga
     8161 gacggttgaa tgcagcagtg tcattgacat cgagattaca aaaatccaga cgtgcactca
     8221 gggtgtccca taaaccttca tcaatggttt ctttcatgaa agtttcgagc gcctcgcgga
     8281 caactttggt atatgccgct ttatcccagt cagcacgccc tacgccgata atccgggtgt
     8341 ccgggttgag ctgaccggct ttttccagtt gatacaggga aggcagcaat ttacgacgcg
     8401 caaggtcgcc tttcgcgccg aaaatgacca ggtcacaggc ctgggctgtt tgcgttaccg
     8461 ccatgtcatt ctccttaagt taactaaccc ggtacttaag ccagggtata cttgtaattt
     8521 tcttacggtg cactgtactg cttttacgag cttgcgaaaa ctgtaaacgc ttatccaccc
     8581 gtgcgattac gggaaaagcg cgcaaagcgc ggcaaaactg ataaaaaatc atcgttttcc
     8641 attcggtaaa aatctgacac tgatcatgtt atgaaaaaaa ataacaactt ttttatctgc
     8701 ttttgtcatt aacacggcac acaggcgtaa tatctgacaa aactgcattt cgatttcttt
     8761 cagtgcggaa atcgtcatta cccgtgagtc tctttacatc atgaatatgc tggaaaaaat
     8821 ccagtctcag ctggaacatt tgagcaaatc agagcgcaaa gttgccgagg tcattctggc
     8881 ttcgcccgat aacgcgatcc attcgagtat tgctgctatg gcactggaag ccaatgttag
     8941 cgaaccgacg gtgaatcgtt tctgtcgcag catggacacg cgcggttttc ctgattttaa
     9001 acttcatctg gcacagagtc tggcgaatgg cactccctat gttaatcgca atgtcaatga
     9061 agatgacagc gttgaatcat acacagggaa aatatttgag tccgcaatgg caacgcttga
     9121 tcatgtccgt cattcactgg ataaatctgc catcaaccgc gccgtcgact tgctcactca
     9181 ggcaaaaaaa atcgcctttt tcggattagg ctcttcagcc gccgttgccc acgatgcgat
     9241 gaataagttc tttcgtttta atgttccggt ggtgtactcc gatgatatcg tgctgcaacg
     9301 catgagttgt atgaattgta gcgacggaga cgtggtggtg ctgatttctc acactggaag
     9361 aacaaaaaat ctggtcgagc tggcgcagct ggctcgcgaa aacgacgcaa tggtgattgc
     9421 cctcacctct gcgggtaccc cgctcgcccg ggaagcaacg ctggcaatta ccctcgacgt
     9481 accggaagat actgacattt atatgcccat ggtttctcga cttgcacagc tgaccgtgat
     9541 agatgtgctg gcgacaggat ttactttgcg acgcggtgca aaattcagag ataacttgaa
     9601 gcgggtcaag gaagcgctga aggaatcgcg ttttgataag cagttactta atttaagtga
     9661 cgatcgctaa aaacgactgt cactgtccta atcttatacg acatccgaat gagattaatt
     9721 tatcgccatc gcggcgttat ttcattcgga tttcatgttc aagcaacacc tggttgtttc
     9781 agtcaacgga gtattacatg tccagaaggc ttcgcagaac aaaaatcgtt accacgttag
     9841 gcccagcaac agatcgcgat aataatcttg aaaaagttat cgcggcgggt gccaacgttg
     9901 tacgtatgaa cttttctcac ggctcgcctg aagatcacaa aatgcgcgcg gataaagttc
     9961 gtgagattgc cgcaaaactg gggcgtcatg tggctattct gggtgacctc caggggccca
    10021 aaatccgtgt atccaccttt aaagaaggca aagttttcct caatattggg gataaattcc
    10081 tgctcgacgc caacctgggt aaaggtgaag gcgacaaaga aaaagtcggt atcgactaca
    10141 aaggcctgcc tgctgacgtc gtgcctggtg acatcctgct gctggacgat ggtcgcgtcc
    10201 agttaaaagt actggaagtt cagggcatga aagtgttcac cgaagtcacc gtcggtggtc
    10261 ccctctccaa caataaaggt atcaacaaac ttggcggcgg tttgtcggct gaagcgctga
    10321 ccgaaaaaga caaagcagac attaagactg cggcgttgat tggcgtagat tacctggctg
    10381 tctccttccc acgctgtggc gaagatctga actatgcccg tcgcttggca cgcgatgcag
    10441 gatgtgatgc gaaaattgtt gccaaggttg aacgtgcgga agccgtttgc agccaggatg
    10501 caatggatga catcatcctc gcctctgacg tggtaatggt tgcacgtggc gacctcggtg
    10561 tggaaattgg cgacccggaa ctggtcggca ttcagaaagc gttgatccgt cgtgcgcgtc
    10621 agctaaaccg agcggtaatc acggcgaccc agatgatgga gtcaatgatt actaacccga
    10681 tgccgacgcg tgcagaagtc atggacgtag caaacgccgt tctggatggt actgacgctg
    10741 tgatgctgtc tgcagaaact gccgcagggc agtatccgtc agaaactgtt gcagccatgg
    10801 cgcgcgtttg cctgggtgcg gaaaaaatcc cgagcatcaa cgtttctaaa caccgtctgg
    10861 acgttcagtt cgacaatgtg gaagaagcta ttgccatgtc agcaatgtac gcagctaacc
    10921 acctgaaagg cgttacggcg attattacca tgaccgaatc gggtcgtacc gcgctgatga
    10981 cctcccgtat cagctctggt ctaccaattt tcgccatgtc gcgccatgaa cgtacgctga
    11041 acctgactgc tctctatcgt ggcgttacgc cggtgcactt tgatagcgct aatgacggcg
    11101 tagcagctgc cagcgaagcg gttaatctgc tgcgcgataa aggttacttg atgtctggtg
    11161 acctggtgat tgtcacccag ggcgacgtga tgagtaccgt gggttctact aataccacgc
    11221 gtattttaac ggtagagtaa tctcacctgc cccggccgct gatggccggg gtatttagca
    11281 acacataaat taggactact tattcaatcc aatcataatc acagccccct gtaaaatgaa
    11341 tacagggata gcctgaatgg agatctaaat agcttgcaag acgtcgcata cccgcttcct
    11401 ctgcaacact atgtccaata actgccatcg gtaagccact atctttggag tattgtgtct
    11461 gcacccatgt tttaattgaa tcgttaatcg taatataata atcagcctga tattccatat
    11521 attgtattgg atcacaaaaa cagcctgccc caatgccaac agttctgact actct
//
LOCUS       DADKRT010000136        11410 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.137, whole genome shotgun sequence.
ACCESSION   DADKRT010000136 DADKRT010000000
VERSION     DADKRT010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11410
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.137"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(392..598)
                     /locus_tag="JQ356_003083"
     CDS             complement(392..598)
                     /locus_tag="JQ356_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HAY4623102.1"
                     /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMEQAEKATGDFY"
     gene            910..999
                     /gene="kdpF"
                     /locus_tag="JQ356_003084"
     CDS             910..999
                     /gene="kdpF"
                     /locus_tag="JQ356_003084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HAY4623103.1"
                     /translation="MSAGVIAGVLLVFLLLGYLVYALINAEAF"
     gene            999..2672
                     /gene="kdpA"
                     /locus_tag="JQ356_003085"
     CDS             999..2672
                     /gene="kdpA"
                     /locus_tag="JQ356_003085"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706533.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HAY4623104.1"
                     /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTAGVER
                     ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
                     LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFAFIRAFTRQSM
                     STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGD
                     RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALSADSSINMEGKESRFGVLVSSL
                     FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
     gene            2695..4743
                     /gene="kdpB"
                     /locus_tag="JQ356_003086"
     CDS             2695..4743
                     /gene="kdpB"
                     /locus_tag="JQ356_003086"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HAY4623105.1"
                     /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL
                     LTTCISIAMASGAMPGNALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG
                     ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE
                     IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV
                     AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA
                     DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM
                     IRKGSVDAIRRHVEANGGHFPADVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK
                     GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
                     EGRLVAMTGDGTNDAPALAQADIAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK
                     QMLMTRGSLTTFSITNDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFN
                     ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV
                     "
     gene            4752..5295
                     /gene="kdpC"
                     /locus_tag="JQ356_003087"
                     /pseudo
     CDS             4752..5295
                     /gene="kdpC"
                     /locus_tag="JQ356_003087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
     gene            5288..7972
                     /gene="kdbD"
                     /locus_tag="JQ356_003088"
     CDS             5288..7972
                     /gene="kdbD"
                     /locus_tag="JQ356_003088"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     KdbD"
                     /protein_id="HAY4623106.1"
                     /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAK
                     AQRLRAQGLDIVVGVVETHGRKDTDAMLEGLAVLPPKRLAYRGRHICEFDLDAALARR
                     PALILMDELAHSNALGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI
                     QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL
                     RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR
                     LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
                     HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFK
                     DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
                     ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
                     EQRTRHLYEMSKALAVGRSPQDIAATIEQFIASTFHARSQVLLPDDNGKLQPLTHPQG
                     MTPWDDTIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI
                     PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL
                     FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT
                     LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE
                     IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV
                     DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM"
     gene            7969..8646
                     /gene="kdpE"
                     /locus_tag="JQ356_003089"
     CDS             7969..8646
                     /gene="kdpE"
                     /locus_tag="JQ356_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator KdpE"
                     /protein_id="HAY4623107.1"
                     /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP
                     FGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFHLL
                     AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG
                     IGYRFML"
     gene            complement(8862..9119)
                     /locus_tag="JQ356_003090"
     CDS             complement(8862..9119)
                     /locus_tag="JQ356_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623108.1"
                     /translation="MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVG
                     RLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS"
     gene            9242..>11410
                     /gene="speF"
                     /locus_tag="JQ356_003091"
     CDS             9242..>11410
                     /gene="speF"
                     /locus_tag="JQ356_003091"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase SpeF"
                     /protein_id="HAY4623109.1"
                     /translation="MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVT
                     CGKLDEIDATGYGIPVFIATENQERVPAEYLPCISGVFENCESRREFYGRQLETAASH
                     YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRSDLC
                     NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL
                     FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQR
                     TKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCS
                     PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH
                     ASTSPFYPLFAALDINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELV
                     DGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNG
                     EYEAFGVPATILANFLRENGVVPEKYDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL
                     ESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQPQKEMFRKEHFPRV
                     SMNPQEANYAYSRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS
                     ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQ"
BASE COUNT         2549 a         2913 c         3120 g         2828 t
ORIGIN      
        1 ggattgaccg gatggccgga cgtcactccg ccggggcaca ccgaacaggc cacgccggtg
       61 ggggcaccaa tgcgcacccc ggctgaaccc tgaacaatgc taccgccata ctgcgtcatg
      121 tcgccctgac gcgctgccgg ttttccgctc atttctcatc cttgttttat cgggttattt
      181 gtctgctgac aggcaaaacc ctacagattt ataagaaagc cttaagtgag atatccatca
      241 gatagaaaca attaggaaaa tatttatata tttttcctga atatatttca gctgggtaat
      301 accatatcta aatatttacc tgaacatctt cctaataaaa aaaccgccag catctccact
      361 agcggttttc aatgtattca aaactcggca atcagtaaaa atcaccggtt gccttttcgg
      421 cctgttccat ccaaaccggt ttatcgctgg ttttcgacca gacgcggtgc aggtagctgt
      481 aaaagcgggc gcggtctttc cagaaaagca tgaaaggcag cgccagaacg cccgctgcaa
      541 ccgcatatgt acggcgtaaa aagataagcc atgcaggata ttctctgtag agttccatac
      601 ttttctcccc cttttgtatc tacccggtga atagcaccgg aaaaatgaat ttgtttatct
      661 gatgaaaata gtaccgcctt ttgtgtaatt ttactactca tccgaccact tatttttgct
      721 tattgatggt ttatttacat tcactttgta attaagttgc acaaaagtta aattaatgct
      781 aaacattagt taaaccatgg cttttgccat ttttatactt ttttacaccc cgcccgcaga
      841 tttttgcgaa atctttgcag ccagaattct actcttccgg tatcactttt aggccactgg
      901 aggtgcactg tgagtgcagg cgtgatagcc ggcgtgttgc tggtgttttt attactgggt
      961 tatttggttt atgccctgat caatgcggag gcgttctgat ggctgcgcaa gggttcttac
     1021 tgattgccac gtttttactg gtattaatgg tgctggcgcg tcctttaggc agcgggctgg
     1081 cgcggctgat taatgacatt cctcttccag gtacagcggg cgttgaacgt atactctttc
     1141 gtttacctgg cgtctctgac catgagatga actggaagca atatctttgt gccattctcg
     1201 gcctgaacat gctggggctg gcggtgctgt tttttatgtt gctcggtcag cactatctgc
     1261 cgcttaatcc acagcagttg ccggggctgt cgtgggatct ggcgctgaat accgccgtca
     1321 gctttgtcac gaataccaac tggcaatctt atagcggtga aaccacgttg agctatttca
     1381 gccagatggc aggcttaacg gtacaaaact ttctttctgc cgccagcggg attgcggtga
     1441 tttttgcctt catccgtgcg tttactcgcc agagcatgag cacactcggg aatgcctggg
     1501 tcgatctgct acgcatcacg ttatgggtgc tagtccctgt ggcgttgttg atcgcactgt
     1561 tttttattca acaaggtgcg ctgcaaaact ttctgcccta tcaggcagtg aataccgttg
     1621 aaggagcgca acagctgtta cccatgggac cagtagcttc tcaggaagcg atcaagatgc
     1681 tcggtactaa cggcggtggc ttctttaatg ccaactcgtc gcatccgttt gaaaacccaa
     1741 ccgcactgac caacttcgtg cagatgctgg cgatcttctt gatcccaaca gctctgtgct
     1801 ttgcctttgg tgaagtgacg ggcgatcgcc gccaggggcg catgttgctg tgggcgatgt
     1861 cagtgatttt tgtcatctgc gtaggcgtgg ttatgtgggc agaagttcag ggtaatcctc
     1921 atctgctggc gctcagcgca gacagcagca tcaatatgga aggtaaagag agccgtttcg
     1981 gcgtgctggt cagtagcctg tttgcggtcg tgactacggc ggcgtcctgt ggcgcggtga
     2041 ttgcgatgca tgattcgttt accgctctcg gcggcatggt gccgatgtgg ctaatgcaaa
     2101 ttggtgaagt ggtgttcggc ggtgtcggtt ctggtcttta cggcatgatg ctgtttgtcc
     2161 tgctggcggt gtttattgcc gggctgatga ttggtcgtac accggaatat ctgggtaaaa
     2221 aaatcgacgt acgcgagatg aaactgactg cactggcgat tctggttact ccaacactgg
     2281 tactgatggg cgcggcgttg gcgatgatga ccgacgccgg acgtagcgcc atgcttaacc
     2341 ctggcccgca tggttttagc gaagtgctgt acgccgtgtc gtccgccgct aacaacaacg
     2401 gcagcgcctt tgccggatta agcgccaact ctccgttctg gaactgttta ctggcgttct
     2461 gcatgtttgt cggtcgcttc ggggtgatta tcccggtgat ggcaattgcc ggttcgctgg
     2521 tgagtaaaaa gagccaaccc gccagctccg gcacgctgcc aacgcacggc ccgctgtttg
     2581 ttggcctgtt aatcggcacc gtgttgctgg ttggcgcact gacctttatc cctgccctgg
     2641 cgcttggtcc ggtggcggaa tatctctcct gatgatattg agtgagcact gaatatgagt
     2701 cgtaaacaac tggcgctatt cgaaccaaca cttgtcgttc aggcgctgaa agaagcggtg
     2761 aaaaaattaa acccgcaggc gcaatggcgc aatccggtga tgtttatcgt ctggatcggc
     2821 agtctgctga ccacctgtat tagcatcgcg atggcaagcg gtgcgatgcc tggcaatgcg
     2881 ctgtttagcg cggcaattag cggctggctg tgggtcaccg tactgttcgc taatttcgcc
     2941 gaggcgctgg cagaaggccg cagtaaagcg caggccaaca gtcttaaagg ggtgaaaaaa
     3001 actgcctttg cccgcaagct gcgtgagccg aaatatggcg ctgcggcgga caaagttcct
     3061 gccgatcaac tgcgtaaagg tgacatcgtg ctggtagaag ctggcgatat tatcccctgc
     3121 gatggtgaag tcattgaagg cggcgcatcg gtcgatgaaa gcgccatcac cggggaatcg
     3181 gcaccggtga tccgtgaatc cggcggcgat tttgcctccg tcaccggcgg cacgcgtatt
     3241 ctttctgact ggctggtgat tgagtgtagc gttaaccccg gtgagacatt tctggatcgg
     3301 atgatcgcga tggtggaagg cgcacagcga cgcaaaacac cgaacgagat tgccctgact
     3361 atcctgctga ttgctctgac catcgtcttt ttactggcaa ccgccacgct gtggccgttt
     3421 tccgcgtggg gcggtaatgc cgtgagtgta acggtactgg tggcgctgct ggtctgtctg
     3481 atcccaacca ctattggcgg cctgttgtca gcgatcggcg tcgccgggat gagtcggatg
     3541 ctgggcgcga atgtgattgc caccagcgga cgtgcagttg aagcggcagg tgacgttgac
     3601 gttctgctac tggataaaac cggcaccatc acactcggta accgtcaggc gtcggagttt
     3661 atccctgcgc agggcgtgga tgaaaaaacg ctggctgacg ccgcacaact ggcttcgctg
     3721 gctgatgaaa cgccggaagg ccgcagtatt gtgatcctcg ccaagcaacg ttttaacctg
     3781 cgcgagcgcg atgtgcagtc gctccatgcc acctttgtac cgtttactgc gcaaagccgg
     3841 atgagcggga tcaacatcga caaccgcatg atccgtaaag gttctgtcga tgccattcgc
     3901 cgccatgttg aggctaacgg cggtcacttc cctgccgatg ttgatcaaaa agtcgatcag
     3961 gttgcgcgtc agggggccac gccgctggtg gtggtggaag gttcccgtgt gctgggcgtt
     4021 attgcgctga aagatatcgt caaaggcggt attaaagagc gcttcgccca gctgcgcaaa
     4081 atgggcatta aaacggtgat gattaccggc gataaccgtc tgactgccgc cgccattgct
     4141 gcggaagcgg gcgtcgatga ttttctcgcc gaagcgacac cggaggccaa gctggcattg
     4201 attcgtcagt atcaggcgga aggccgtttg gtggcgatga ccggcgacgg caccaacgat
     4261 gctccggcgc tggcgcaagc agatatcgcg gtggcgatga actccggcac ccaggcggcg
     4321 aaagaggcgg gcaatatggt cgatctcgac tctaacccga ccaagttgat cgaggtggtg
     4381 catattggca aacagatgct gatgacccgt ggctcgctga ccaccttcag cattaccaac
     4441 gatgtggcga aatacttcgc cattattccg gcggcgttcg cggcaacgta tccgcagtta
     4501 aatgcgctga acatcatgcg cctgcattcg cccgactccg ccattctcag tgcagtcatt
     4561 ttcaacgcct tgattatcgt ctttttgatt cctctggcgt taaaaggcgt gagttataaa
     4621 ccgcttaccg cttctgccat gttgcgccgt aacttatgga tttacggtct gggtgggctg
     4681 ctggtgccgt ttattggtat caaagtcatt gatttactgc tgaccgtttg cggtctggtg
     4741 tgaggtttac catgcgtggc ttacgtccgg cattatcgac atttatcttt ctgttattga
     4801 ttactggcgg cgtttacccg ctgctgacca ccgtgctggg gcaatggtgg tttccctggc
     4861 aggccaacgg ttcgttgatt cgtgaaggtg atacggtgcg gggttcggca ttaatcgggc
     4921 agaattttac cggcaacggc agaaatgccc tataatccac aggcttctgg cgggagcaat
     4981 ctggcggtca gtaaccctga gctggataaa caaatagccg cacgcgttgc tgcattacgg
     5041 gccgctaacc cggatgccag tacgaacgtt ccggttgaac tggtgacggc atcggcaagc
     5101 gggctggaca ataatatcac cccgcaagcg gcggcctggc agatcccacg catcgcgaaa
     5161 gcgcgtaatc tcagcgttga acagctcacg cagctgatcg caaaatacaa ccaacaaccg
     5221 ctggtgaaat atatcggcca gccggtcgtc aacattgtcg aactcaatct ggcgctggat
     5281 aagcttgatg aataacgaac ccttacgtcc cgaccccgat cgtctgctgg aacaaactgc
     5341 cgcgccgcat cgggggaagc tgaaagtttt cttcggtgcc tgtgcaggcg tcgggaagac
     5401 ctgggcgatg ctggcaaaag cccagcgact gcgggcgcaa gggctggata ttgtggttgg
     5461 cgtggtagaa acccacgggc gaaaagatac cgacgcaatg ctggaagggc tggctgttct
     5521 gccgccaaaa cgcctggcgt accgtgggcg gcacatctgc gagtttgacc tcgatgccgc
     5581 cctcgcccgc cgtccggcgc tgatcttaat ggacgaactg gcgcacagta atgcgctagg
     5641 ttctcgtcac cctaaacgct ggcaggacat cgaagagctg ctggaagcag gcattgatgt
     5701 tttcactacc gtcaacgttc agcatctgga aagtctgaat gatgtggtca gcggcgtcac
     5761 cggaattcag gtacgggaaa ccgtgcccga tccttttttc gatgccgccg acgacgtggt
     5821 tctggtggac ttgcccccgg acgatctgcg ccagcggctg aaagaaggca aagtctatat
     5881 tgccgggcag gcggagcgcg ccattgaaca ttttttccgc aaaggcaatc tgatcgccct
     5941 gcgcgaactg gcactgcgcc gtactgccga tcgcgttgat gagcaaatgc gcgcctggcg
     6001 ggggcatcct ggcgaagaga aagtctggca cacgcgcgac gcgatccttt tatgcatcgg
     6061 ccataacacc ggtagtgaga agctggtccg cgcggcggcg cggctggcgt cacggctggg
     6121 tagcgtctgg cacgcggtgt atgttgaaac ccctgccctg caccgcttac cggaaaaaaa
     6181 acgtcgggca attctcagcg ccttacgtct ggcgcaggag ctgggcgcgg agacggcaac
     6241 actttctgat ccagcggaag aaaaagcagt agtgcgttat gcccgtgaac ataatctcgg
     6301 caagattatt ctcggtcgcc cggcctcgcg ccgctggtgg cgtcgggaaa cgtttgctga
     6361 ccgactggcg cgcatcgccc ccgatctcga tcaggtgctg gtcgcgcttg atgaaccacc
     6421 cgcccgcacg attaacaacg cgccggatag ccgctctttt aaagacaagt ggcgggtaca
     6481 gattcaggga tgcgtggttg ccgccgcgtt atgcgccgtt atcactttaa ttgccatgca
     6541 gtggctgatg gcgtttgatg ccgccaacct ggtgatgctg tatctgcttg gcgtggtggt
     6601 ggtggcgcta ttttatggac gctggccttc ggtggttgct accgtcatta atgtggtgag
     6661 tttcgatctc ttttttatcg ccccacgcgg cacgctcgcc gtctctgatg tgcaatatct
     6721 gctgaccttc gcagtgatgt taaccgtcgg gctggtgatc gggaacctta ctgctggcgt
     6781 gcgttatcag gcgcgggtag cccgttaccg cgagcaacgc acacggcact tatatgaaat
     6841 gtcgaaagct ctggcggtgg gccgcagtcc gcaggacatc gccgccacca tcgaacaatt
     6901 tattgcctcc acgtttcatg cccgcagtca ggtgttgttg cccgatgaca acggtaaatt
     6961 gcagccgtta acacatccgc aaggaatgac gccatgggac gataccatcg cgcagtggag
     7021 ttttgataaa ggcctgcctg cgggcgcggg caccgacacg ttacccggtg taccgtacca
     7081 gattttgccg ctaaaaagcg gcgagaaaac ctacgggctg gtggtggtgg agccggggaa
     7141 tctgcgccag ttgatgatcc cggaacagca gcgcctgctg gagacgttta cgctgttagt
     7201 cgccaatgcc cttgagcggc tgacgctaac cgccagcgaa gaacaggcgc ggatggcaag
     7261 cgaacgtgaa cagatccgca acgccctact ggcagcgctt tcgcatgatt tacgcacgcc
     7321 gctcacggtg ctgttcggtc aggcagaaat cttaacgctc gatctggcaa gcgaaggatc
     7381 gccccacgcc cgccaggcca gcgagattcg tcagcatgtg ctgaacacta cccgactggt
     7441 gaataatcta ctggatatgg cgcgaattca gtccggcggc tttaatttga agaaagagtg
     7501 gttaacgctg gaagaagtgg tcggtagcgc gctgcaaatg ctggaaccgg gtttatcgtc
     7561 gcccatcaat ctttctctgc cagaaccgct gaccttaatc cacgttgacg ggccactctt
     7621 tgaacgggtg ctgattaatc tgctggagaa cgcggtgaaa tatgcgggtg cgcaggccga
     7681 aattggtatc gatgcccacg ttgagggcga aaatctacaa ctggatgtct gggataacgg
     7741 ccccggtctt ccgccaggcc aggagcagac gatatttgat aagtttgctc gcgggaataa
     7801 agagtcggca gtaccggggg tagggcttgg actggcaatt tgtcgggcga tagtggatgt
     7861 acacgggggc actattaccg cgttcaaccg accggaaggt ggtgcctgtt ttcgtgttac
     7921 acttccccag caaactgccc ctgaacttga agaatttcat gaggatatgt gacaaacgtt
     7981 ctgattgttg aagatgaaca ggctattcgt cgctttctgc gcacggcgct ggagggcgac
     8041 gggatgcgcg tctatgaggc cgaaacgctg caacgcggct tgctggaagc ggctacccgt
     8101 aagccagatt tgattattct cgatctcggc ctgcccgatg gtgatgggat tgagtttatc
     8161 cgcgacctgc gccagtggag cgcggtgccg gtgattgtgc tttccgcacg cagcgaagag
     8221 agcgacaaaa tcgccgcgct ggatgccgga gcggatgatt atctgagtaa gccgtttggc
     8281 attggcgaat tgcaggcccg tctgcgcgtc gctttacgcc gccactctgc taccgccgcg
     8341 cccgatccgc tggtgaaatt ttccgatgtt accgtcgatt tagccgcccg cgtgattcac
     8401 cggggtgagg aagaggtgca tctcacacca attgagttcc acctgctggc ggtgctgctc
     8461 aacaatgccg gaaaagtact cacccagcgc cagctcctta accaggtgtg ggggccaaac
     8521 gcggtcgaac acagtcacta tttgcgtatt tatatgggac atctgcgaca aaaactggaa
     8581 caggatcccg cccgcccacg ccatttcatt actgaaaccg gtattggcta tcggtttatg
     8641 ctttgaatat taattttaat acagcctgcc ttttattaat taaagccgta ataataaata
     8701 cggcttttta tcttaaacaa cacacaaaaa taacaattca atattttata ttactgagta
     8761 aaaagctcat cattaaataa attaagattg atcatttttt attgatcacc ttcacagttc
     8821 aaccgtattt cctggataga atatcttcac cttcattcac atcaggaaag gtaaattaaa
     8881 tggaaaataa cagccgcact atgccccata taaggcggac aactcatatt atgaagtttg
     8941 ctcatcgcaa tagcttcgac tttcacttct tcaatgcccg ttagtctacc gactaagggc
     9001 acttcagcgt acaggtcttc ctgactctct gtattacagg catatgcctg tattccgcag
     9061 tgctcattct ctgttaaccc ttgtattatc agccaccgga ctggtaaggg tttctgcatt
     9121 ctgaaaaaag caatctacct gatttattta tcagcggggt aactttgctt ttttccggca
     9181 cgatcgattt ctcattcgag aaattgagga cctgctatta cctaaaataa agagatgaaa
     9241 aatgtcaaaa ttaaaaattg cggttagtga ttcttgcccg gactgtttta ccacgcagcg
     9301 agaatgtatc tacattaatg aaagtcgtaa tatcgatgtg gcggcaatcg ttttatcgct
     9361 caacgatgtt acatgcggaa aactcgatga aatcgatgcc acgggttatg gcatcccggt
     9421 atttattgct actgaaaatc aagaacgtgt acccgcagag tatttgccct gtatttcggg
     9481 tgtctttgag aattgcgaat cgcgacgaga attttatggt cgtcagttag aaaccgctgc
     9541 cagccattat gaaactcaac tgcgcccacc tttcttccgc gcactggtcg attatgtcaa
     9601 tcaaggtaac agcgcgtttg attgccctgg tcatcagggc ggcgaatttt tccgtcgcca
     9661 tccggcgggg aatcagtttg tggaatactt tggtgaggcg ctgttccgtt ccgacttgtg
     9721 caacgcagac gtagcaatgg gtgatctgct gattcacgaa ggcgcgccat gcattgcaca
     9781 gcaacatgcg gcaaaagtgt tcaatgccga taaaacatac ttcgttctaa atggcacttc
     9841 atcttctaac aaagtggttt taaacgccct gctgacaccg ggtgatctgg tgctgtttga
     9901 ccgcaataac cacaaatcta accaccacgg agcgttgcta caggctggtg caacaccggt
     9961 ttatctggaa accgcacgta acccgtatgg ctttatcggt ggcattgatg cgcactgttt
    10021 tgaagaaagt tacctgcgtg agctgatcgc ggaagtcgca ccgcagcgga caaaagaggc
    10081 tcgtcctttc cgcctcgccg ttattcagct aggcacctac gacggtacga tttataacgc
    10141 ccgccaggtg gtggataaaa ttggtcatct gtgtgactac attctgtttg actccgcatg
    10201 ggtcggctat gagcaattta tcccgatgat ggctgactgt tcaccgctgt tgctggatct
    10261 taatgagaac gatccgggca ttctggttac gcaatctgtg cataaacagc aggctggttt
    10321 ttctcaaact tcacaaatcc ataaaaaaga cagccacatc aaagggcaac agcgttatgt
    10381 accgcacaaa cgcatgaaca acgcctttat gatgcatgcc tccaccagcc cgttctatcc
    10441 gctgtttgcc gcactggata tcaacgccaa aatgcatgaa ggtgtcagcg gtcgtaatat
    10501 gtggatggat tgtgtggtaa atggcattaa tgcccgcaag ctgatcctcg ataactgtca
    10561 gcatattcgt ccgttcgtac ctgaactagt ggatggtaaa ccctggcagt cgtatgaaac
    10621 agcgcaaatt gcggttgatc tgcgcttctt ccagtttgta ccaggggaac actggcactc
    10681 ttttgaaggc tatgcagaga atcaatactt tgtcgatcca tgcaaactgt tgctgacaac
    10741 cccaggtatt gatgcacgta acggcgaata tgaagcgttc ggtgtacccg cgacgattct
    10801 tgctaacttc ctgcgcgaaa atggcgtagt gccggaaaaa tacgatctta actccatcct
    10861 cttcctgctg actccggcag aagatatggc caaacttcag caacttgttg ccctgctggt
    10921 acgcttcgaa aaactgcttg agtccgacgc gccattagca gaagtgctgc cttccatcta
    10981 caaacagcat gaagagcgct acgccggtta tacccttcgt cagttatgcc aggaaatgca
    11041 tgatttgtat gcccgtcaca acgtgaaaca accgcaaaaa gagatgttcc gtaaggaaca
    11101 cttcccacgc gtaagcatga atccacaaga agccaactac gcctattcac gcggtgaagt
    11161 ggagctggtt cgtctgccgg atgccgaagg ccgtatcgct gccgaaggtg cgcttcctta
    11221 tcctccgggt gtgctgtgtg ttgttccggg tgaaatctgg ggtggtgctg ttttgcgtta
    11281 cttcagcgct ctggaagaag ggatcaacct gctgccaggt tttgcaccgg agctgcaggg
    11341 tgtctatatc gaagaacatg atggtcgtaa gcaagtttgg tgctatgtca tcaagcctcg
    11401 tgatgcgcaa
//
LOCUS       DADKRT010000137        11405 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.138, whole genome shotgun sequence.
ACCESSION   DADKRT010000137 DADKRT010000000
VERSION     DADKRT010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11405
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.138"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..921
                     /gene="gap"
                     /locus_tag="JQ356_003092"
     CDS             <1..921
                     /gene="gap"
                     /locus_tag="JQ356_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HAY4623110.1"
                     /translation="DVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKS
                     IAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTI
                     VYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVD
                     GPRGKDLRASRAAAENIIPHTTGAAKAIGLEIPELSGKLKGHAQRVPVKTGSVTELVS
                     ILGKKATAEEVNNALKQATTNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITAVGD
                     LQLVKTVAWYDNEYGFVTQLIRTLEKFAKL"
     gene            complement(963..2403)
                     /gene="aldA"
                     /locus_tag="JQ356_003093"
                     /pseudo
     CDS             complement(963..2403)
                     /gene="aldA"
                     /locus_tag="JQ356_003093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310048.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(2558..3400)
                     /locus_tag="JQ356_003094"
     CDS             complement(2558..3400)
                     /locus_tag="JQ356_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001027928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HAY4623111.1"
                     /translation="MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAG
                     NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATIL
                     ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTM
                     ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPR
                     LRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLV
                     CKRA"
     gene            complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JQ356_003095"
     CDS             complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JQ356_003095"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HAY4623112.1"
                     /translation="MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ
                     AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF
                     SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP
                     RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR
                     IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF
                     YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT
                     FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELN
                     DTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG"
     gene            7775..8380
                     /gene="azoR"
                     /locus_tag="JQ356_003096"
     CDS             7775..8380
                     /gene="azoR"
                     /locus_tag="JQ356_003096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HAY4623113.1"
                     /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA
                     ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
                     TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
                     LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
     gene            complement(8431..9747)
                     /locus_tag="JQ356_003097"
     CDS             complement(8431..9747)
                     /locus_tag="JQ356_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310040.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HAY4623114.1"
                     /translation="MITERRNVLLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDI
                     PSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCG
                     FLLYPLKFSFIRPEVSGVTGWPFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAER
                     WRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIK
                     IALPYVVGAGSCIVLMELMVMIQLWWPVWLCWPVLSLLIIGRGYGGLGAITTGKDSQG
                     KLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTF
                     EFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSA
                     LVVAAWLLCYGHCKTVDEAISYIRARRSHIVLKEDHKAMLKLWENR"
     gene            complement(9737..11405)
                     /locus_tag="JQ356_003098"
                     /pseudo
     CDS             complement(9737..11405)
                     /locus_tag="JQ356_003098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415928.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
BASE COUNT         2841 a         3096 c         2715 g         2753 t
ORIGIN      
        1 gacgttgtcg ctattaatga tctcacttcc ccaaaaattc tcgcctacct gctgaaacat
       61 gattcaaact acggaccatt cccctggagc gttgatttta cggaagattc acttatcgtt
      121 gatgggaaaa gtatcgcggt ttacgccgaa aaagaggcta aaaatattcc gtggaaagcg
      181 aaaggtgcag aaatcattgt cgaatgtact ggcttttata cctccgccga gaaatcgcag
      241 gcgcatcttg atgctggtgc gaagaaggtg ttgatttccg cccctgccgg tgaaatgaaa
      301 actatcgttt ataacgtcaa tgacgacact ctggatggca acgacaccat tgtttccgtg
      361 gcgtcatgca ccactaactg tcttgcgccg atggccaaag ccttgcatga cagtttcggg
      421 atagaagtcg gcacgatgac gaccattcat gcctatactg gcacccagtc actggtggat
      481 ggcccacgtg gtaaagattt acgtgcttca cgcgcagcgg cagaaaatat cattccccac
      541 actacggggg cggcaaaagc cattggtctg gagatcccgg aactgagcgg caaactgaaa
      601 ggtcatgcgc aacgcgtgcc ggtgaaaaca ggttcggtca ctgaactggt atcgattctc
      661 ggaaaaaaag cgactgccga agaggtgaat aacgcactta aacaagcaac caccaataac
      721 gagtcatttg gttataccga tgaagaaata gtctcttccg atatcattgg cagccatttc
      781 ggttcggtgt ttgatgccac gcaaacggaa attaccgccg tgggcgattt acaactggtg
      841 aaaacggtcg cctggtacga taacgaatat ggcttcgtca cgcagcttat tcgcaccctc
      901 gaaaaattcg ctaaactctg acgcgcacag gcggaggaaa aaacctccgc ctcttttact
      961 cattacgact gtaaataaac cacctgggtc tgcagatatt catgcaggcc atgtttacca
     1021 tctgcgccgc caataccgga tttacgccat ccggcgtgga agccttgcat agcttcgaag
     1081 ttttcacggt tgatgtaagt ttcaccaaac ttcagccctt taatggcttt catcgcgacg
     1141 ttcagatttt gggtatagat ttgatgaggt caggccgtaa tcactgtcat tagccattga
     1201 gatagcctct tccagcgtgt caaatgcgac caccggcaga accgggccaa aggtttcctc
     1261 atgcataatc gacatttcct ggcgaacatc cagcagcaat gtcggcggat aataatatcc
     1321 tttcccctct accgctttgc cacccaacgc cactctcgcc ccttcttcta ctgcgcgcgc
     1381 cactttttgc tcaacccttt ccaacgccgc ggcgttaatc aacggcccca tcgcaatgtc
     1441 gttgcgttca gcggggttac caaattgaac cgcctgcatc gcttcaccca gccgattgac
     1501 gaactgatca taaatgcctt tctgtacata aacacgttct gcacagttac acacttgccc
     1561 actattaatg acgcgtgaat caacgatggc tttgactgcc agttcaagat cggcatcgtc
     1621 cattacgata gctggtgctt taccccccaa ttccagacac actttggtga tgtttttcgc
     1681 cgcagtcgcc atgatcttct cacctgcaga gacgctgcct gtcatactga ccattgcgac
     1741 ctttgggtta cccgccagtt cttgcccaac ggtttcacca cgccccagta caaggttaaa
     1801 cacgccgcgc ggaaggccta tttcatcgac gattttggcg aatgcaatcg cattgtttgg
     1861 cgtaaattca ctaggtttaa tgacgatggt attaccggtc aaaagagcgg gagccatttt
     1921 gcgggcaatg aggaagaacg ggaagttcca cggcagaatg ccggtagtca caccaagcgc
     1981 acgtttaaac aaaagaatat tttctcctgg acgatcgctt tgaataatct cgccctcgta
     2041 acgccgtgcc cactccgcca tgtaatcgat atagtcggca gtaaaagcca cttcgacttc
     2101 agccagctgc tggatcttgc ccccttcttc aacaatcagc gcactgattt cactggcgcg
     2161 ttcgcggatc ccggcggaga ttttgcgcaa ccaactggcg cgttcaatag caggcaacgc
     2221 ttcccattct ggttgtgcac gttctgctgc atcgattgcc ttacgggcat cctcggcctg
     2281 accatcgggt atgcgggaaa tgacagcctc tgtagcaggg tttaccacat caatccatgc
     2341 gtctccacgc caggtaacaa actgtccatc gatatacata ggatgttgaa cgggtactga
     2401 catgggcgac tcctgtgatt tatatgtttg ttcttggtaa attcattgtt aattaacatc
     2461 aatcatcata gagacggcat cgtgaaagga caattctgtg aagggcttca taaaaacaag
     2521 tgtaaaagga ataaaaggca gaaataaaag tcaggagtca tgcccgtttg caaacaagtg
     2581 gttcacaaac gggcaatttt tgacgtaacg agcgactttc catcgcctcg atgagcaccg
     2641 catcgtgttt aagcgtttgc catgcatgga tgacttctgc cggaaaatca acgtgaacga
     2701 taaaatctcg cccgcgggga ccgtagccat cgctatcatc gcgtaaacgc ggcagctcgc
     2761 cagtgagtag tgagagataa cgctcaaccg gccataatcc ttgtaactga ttaataaaga
     2821 ttacactgtc tgcgttattt cctaactgag gaacgaatcc gggataactt aaccagcgtg
     2881 gtgcatcggg attgtcccca gtcatacggc ggaacgtcgc catcgtgcgc cgctgcatgg
     2941 tggggtcctg aacaacgata gccgtatgaa ctcgttctac ggcctgatta aatagcgcga
     3001 tgctaaagcg tgcgttttca ccgcagtttg ttgactggtc ttcaatccag attttttcat
     3061 gcggaatgtg ccagaactga tgagcgatat ccgccaggat ggtcgcttct gctctgccag
     3121 tggtgcggat agtgttgtag tgcggatgct gtgcgatggc gctatacaaa aaagttgtcg
     3181 agtgaccgat accaccacta atcagtaaag gaatttgctg atcgcgagca atcttacatg
     3241 ccgcgtcgat agtcggcata accgcattgc ctgcaaggat cacgcaatcg gcctgatacg
     3301 gcacctcacc ggagaaatca tcctgcgcca gccactgtcc gataacattt atggcatcta
     3361 tagttgccgg cgaaagcgtc ggaaacgggg taatgttcat ggttcctcct tatcgttccc
     3421 ttaagaatac tgcgtgagat aatagtgaga agctgagcac tctgaaagga ggaagtcgta
     3481 tgtccttaac cgccactccg caagcctgac atatctttta aggaaatgct gtagataaac
     3541 attattcatc ttgcagcaga gaattgtatt tttctgaatt cctgaatttt tacccttacc
     3601 gttttagaat taataaaaaa cccggcgcta aatgcttacc gggttttaga tttattaggc
     3661 aaatagcagg gttaaccgct aatctgctcc atcgcctgca aaatacgctt atctgaaatc
     3721 ggataaggcg taccaagttg ttgagcgaag taactaacgc gcagctcttc tatcatccaa
     3781 cggatctctt tcacgtcttc atcctcacga cgtgcaggcg gcagtttgtt gatccattgc
     3841 tgccacgcct gctggacgtt ttcgactttc agcatctgtg cacgatcgcg atgtggatca
     3901 accgccagtt tttccagtcg tttttcaatc gcctgcaaat atcgcagcgt gtcgcccagc
     3961 cgtttgaagc cgttaccagt gacaaaaccg cgatatacca acccgcccat ctgcgcttta
     4021 atgtcagaaa gccccagtgc catggtcata tccacccgcc ctttcagacg tttgttgata
     4081 ttgaacactg ccgtaagaat ttgctcgacc tgcttcgcaa tatctaccac cgtgtcgttc
     4141 agttcggcac gcactttctc atgcagcgca gcaaagcctt cttccgtcca gaccgggcca
     4201 ccattggcgt cgatcagttg atccacaccg caggagatac agtcgtcgat cagctccagc
     4261 actttgccat acgggttgaa gtacagtccc agcttggctt tgttcggtaa cttttcatgt
     4321 aaatacttga tcggcgaggg aatatttagc agcagtagac ggcgaagacc attccacatt
     4381 gcctgttttt gctccagcgg gttatcaaac agtttgatcg ccacgctgtc gcgttcatcc
     4441 accagcgccg gccacgcctt cactttatag ttgccacgct tctgttcgta actttccggc
     4501 agctgaccaa aactccagat atgtaagccg ctctgctcga taccgtcatc cgccaccgcg
     4561 gacagcgttt cctgcacttt gcctttcagc gcatctttca gatcttgtag cgagcgccct
     4621 tcttttagct tcttgttttt gtcatccacc acgcggaagg tgattttcag gtgatcgggc
     4681 acctgatccc agtgccagtc ttcgcggtca acggtaacgc cggtcatccg ccgtaactcg
     4741 cgctcaaggc tgtcgagcaa cggtaactcc agcggtgtga cgcggcctaa aaacgcttcg
     4801 gcgtagtttg gtgcaggcac aaaattacgg cgtaccggtt tcggcaacga tttaatcaga
     4861 gcaatcacca attcgcggcg cagaccgggg atctgccatt caaacccgct ttcctcaacc
     4921 tggttaagta acggcagcgg aatatgtacg gtcacaccgt ccgcgtctgc gcctggctca
     4981 aactgatagc tcaaacgcag cttgagattg ccctgatgcc agaagttcgg gtaatccagc
     5041 ttgctgattt tttccgcccc ttctttgatc aacatgctct tttcaaagtt gagcaaatca
     5101 ggcgtttcgc ggctgacttt tttccaccag ctatcgaagt gacgagcgga gattacatcg
     5161 tggctgatgc gctggtcgta gaactcaaac agcgtttcgt catcaaccag aatatcgcgg
     5221 cgacgtgatt tgtgttccag ctcttccact tcggcccgca gtttcaggtt ttcacggaag
     5281 aatgcgtgac gcgtctgcca gtcaccttcc accagcgcat ggcgaataaa gagttcacga
     5341 cataacgccg gatcgatctg gctgtagttg accttgcgcg cggcaacaat cggcaaacca
     5401 taaacagtga ctttttccgt tgccatcacc gcgccctgcg cccgttccca gtgcggttcg
     5461 ctgtaggtac gtttaatcaa atgctgagcg acaggctcca cccattccgg gtcgatacgc
     5521 gcagcaatgc gcccccacag gcggctggtt tctaccagtt ccgccaccat tacccatttc
     5581 ggcggttttt tgaataaacc agaaccgggg aagatggaga aacgcgcgtt acgtgcgccg
     5641 gtatattctt gtttatcggc atctttcatg ccgatatggg aaagtaaacc cgtcagcaac
     5701 gcaatgtgaa tttcgcgata ctccgccggt tcgctgttaa ccggaatgcc aagttctttc
     5761 accacctgac gcaactgggt gtagatatcc tgccattcgc gcacgcgcag atagttgaga
     5821 taatcggtac gacacaggcg acggaaggcg tttgaagaaa gcgccttttg ctgctcgcca
     5881 agataattcc acagatttac aaacgcgagg aagtcggatt ctttgtcgtg gaagcgacga
     5941 tgtttttcgt ccgatgcctg ctgtttgtcc atcggccgct cacgcgggtc ctgaatggag
     6001 agcgcggacg tgataatcat cgcctcacgc acgcagccat gtttctgcgc ttccagcacc
     6061 atacgcgcca gacgaggatc gaccggcagt tgcgagagct ggcgaccgag cggcgtcagt
     6121 ttataggcgc tggcctgttc atccgtggtg atcgcgccca gttcttcgag cagacgcacg
     6181 ccatcctgga tattgcgttt atccggtgct tcgacaaacg ggaacgcagc gatatcgccc
     6241 agccccagcg cggtcatctg caaaataacc gaggccaggt tggtacgcag aatctccgga
     6301 tcggtaaact ccgggcgcga gaggaaatcg tcttcggaat agagacgaat acagatccct
     6361 tcggacacac gaccacaacg gcctttacgc tgattggcag acgcctgtga aatgggttca
     6421 atcggcaaac gctgcacttt ggtgcgatag ctgtagcggc tgatacgcgc cgtaccgggg
     6481 tcgataacgt atttaatccc cggtacagtc agcgaggttt ccgcgacgtt ggtcgccagc
     6541 acaatgcgtc gcccgctgtg cgactggaac acgcggttct gttcgctatt cgaaagccgc
     6601 gcataaagcg gcaagatttc ggtatggcgt aagttcagct tgttcagcgc atcggcggta
     6661 tcgcgaattt cccgctcgcc gctcataaag atcagaatgt cgccagggct ttcctggctc
     6721 agttcgtcta cggcgtcaaa aatcgcctgc aactgatcgc gctcggtgtc atcggcttct
     6781 tcaacaatcg ggcgatagcg cacttccacc ggataggtcc gaccggagac ttcgataatc
     6841 ggcgcattat taaagtggcg agaaaagcgt tccgggtcga tagtcgcgga agtgataatg
     6901 atttttaggt caggacgccg cggcagcaac tctttcaaat agccgagcag aaaatcgata
     6961 ttcaggctgc gttcgtgtgc ttcgtcaata atgatggtgt cgtactgcat cagcaggcgg
     7021 tcttgctgga tctccgccag caggataccg tcggtcatca gcttgaccat cgtgttatca
     7081 cttacgtgat cgctgaaacg cactttgtaa ccgatgcaac cgcctggctc cgttttcagc
     7141 tcttccgcaa tacggttcgc caccgttctt gccgccagac gacgcggctg ggtatggccg
     7201 atcagtcctt taatcccgcg ccccagctcc atacagattt tcggtagctg ggtcgtttta
     7261 ccggaaccgg tttccccggc gacgatcacc acctggtgat cacgaatcgc ttcgagaata
     7321 tcctgttttt tctgactaac tggcaaattg tccggataag tgatttccgg tcgtgccgct
     7381 tcacgcagca ggactttccc tgccgcctgg tcaatctctt tcgccatctc ctggaaaatg
     7441 gcctgttgtg catcaggatt tttaaccttc ttaacaccat gcagacggcg agaaaaacgc
     7501 agtctgtcgc gcagcatcaa cgaatccagc cgctgctgca aagcagtaaa ggtcaatttt
     7561 tgttgttctg tcataacgtt agtgggcagt agtctgcctg attaattttc ttttaaatga
     7621 tagatataga gtaccacatc gcggctttct atgcgttgtt caataaattc gaacataggc
     7681 ttcgatttat tgcgctatct ctgtggcagg attgtgaata aagtgtcagc aagcaacggg
     7741 gcatcgccaa ttcaaacatc tataaggaaa caccatgagc aaggtattag ttcttaaatc
     7801 cagcatcctg gcagggtact ctcagtctaa tcagttgtcc gattattttg ttgaacaatg
     7861 gcgcgaaaag cactccgctg atgaaatcac cgttcgcgac ctggctgcaa atccgattcc
     7921 ggtactggat ggcgaactgg ttggcgctct gcgtccgagc gatgcgccgc tgactccgcg
     7981 tcagcaggaa gctctggcgc tttccgatga gctgattgcc gagctgaaag cccacgacgt
     8041 tatcgttatt gcggcaccga tgtataactt caacatctca actcagttga aaaactattt
     8101 tgacctggtt gcacgcgcag gcgttacttt ccgctatacc gagaacggtc cggaaggtct
     8161 ggtaacgggt aaaaaagcca tcgttattac cagccgcggt gggatccaca aagatggacc
     8221 aacggacctg gtgacgccgt atctgtccac gttcctcggc tttatcggca ttaccgatgt
     8281 gaaatttgtc ttcgccgaag ggatcgcata cggtccggaa atggcagcga aagcgcagtc
     8341 tgacgcgaaa gcggccatcg acagcattgt tgctgcataa ccggacacga tcttgatgtg
     8401 gactgtagtt cagtccacat ctcaatccac ttacctgttt tcccataatt tcagcatcgc
     8461 tttgtgatct tccttaagca caatatgcga acgtctggct cgaatataac taatcgcttc
     8521 atcaacggtt ttacagtgtc cgtaacataa caaccatgcc gccactacca gcgcactgcg
     8581 cgataatccc aacgcgcaat ggaccagaac gctgccttgc tcttcgcgta atgtttccag
     8641 catcgccacg gcctgtcgga gctccccctc ttccggaacc accagatcca gcatcggtac
     8701 acagaaatag agtcgatctt ttgtcgctcg tccccgaggg aattcaaagg tgacgtccag
     8761 aaccgcattc tgtgccggaa tatgtcgtgg aaacgcccct aaataaacac cagcagtaat
     8821 tttgctcacc ggctccaggc gacgacaaaa ccaacgcata gacagccaca tcccgatgcg
     8881 ccagggcaat gtcagccagt aaacggcggg cgggagtttc ccctgactat ctttccctgt
     8941 tgttatcgcg ccaagcccac cgtacccacg gccaataatg agtagcgata atactggcca
     9001 acataaccag actggccacc ataactgaat catcaccatt agctccatca acacaatgca
     9061 cgagcccgcg cctacgacat atggcagtgc tattttgatt cgacgttgat caggtttctg
     9121 ataattccaa cgacgatcga cgggcaccat ccagtcaatc aacataccta ccgccagccc
     9181 tgtgatgaca tcaataaaat gatgctgcca ggtcgtcaga gtagaaatag cgatgagtaa
     9241 aaaccatccg ccacagactt tacgccacct ctcagccaga tgctgacgaa agtgacgcca
     9301 aagtagccag cagagaataa tatgcagcga aggagactgg ttataaggca gatcaaacag
     9361 ttcaagttgc gaaaatggcc atcccgtcac cccactcact tcaggacgga taaaactaaa
     9421 cttcagcgga tagagcaaaa aaccgcagca ggccattacc gttgccagaa taagccggtg
     9481 gacaagtcgg cgctgttcga atgtcgtgct acaaacgaac agcgaaaatc catataaaag
     9541 atccagactc cagtaaggaa caatagtcca gggaagaaaa gggatcgccg tttcccaacc
     9601 gaatacctga ctggggatat catggctgtt aaggtcctga accgcggtga actgattaag
     9661 agatccatag gtgaagaaaa aaaacggggc cagcaacaat aaccagccag cgccttgtag
     9721 caatacgttc cgacgttcag ttatcacgac gcaccgccat cgaaaccgta aaaatacccc
     9781 actcatcaat ccgttgtgtg catttatcaa atccggcatc acgcacgagt gaatccatct
     9841 ccccttgcga acgcacgcgc attacccacg gtttaccatc tttatgactg gttaacaccc
     9901 cggcaatcat ctccagttga gggtgccacg gctgcccggt gtagatgaga atgccgaccg
     9961 gttcgatggc attggcaaga cctgcgagtg agttttttac ctgctcattt tcgggaaaaa
    10021 gctcatacag tccagagaca attgccagcg taggccgcgg agttaacgcg ctgagttcct
    10081 ccgggttaaa cgcatcgccc tgttcaaaac gcacccgccc agacattccc cgttgggcaa
    10141 tcatctcttg cccctgtgca acatttaact cgctgtaatc acgtaacaaa atatcgctta
    10201 cggcaggctc gtttgccagc gcatccagta catagcgccc atgccctgcg gcaatgtcaa
    10261 ccacgcggac ggctaaacct ttggcgtgga gatcggcaac ggcttgttta atcagtattt
    10321 gtaaatgggt tttgcgctgg cgaataccgc gccagccaac actgttcagg tagattttgt
    10381 cgattaagcg cccgaatgcg ttactacctt gcggttgatt ttgatagaca taatccagcg
    10441 aactgcctga atcaaagccg gtgctcattc cgagatgcag gcccgcagag tgcgtcccga
    10501 acaatttcat cgcctttcgc ataaagcgat acgctaaatc aaccggcgat aatagcacgg
    10561 gtccaccaga aagtagccgc cattgatccg ctgatggtcc tgtgcagtct tcatgctgat
    10621 aatcaaattt ttgcgatttg ttagcatata aacgactaat aaagctttgc attttttcaa
    10681 atgccagcgc cctgttctct tcacccaacg tgtcgtgata aaagcctggc agcagatgca
    10741 gctctttcag agggctacgt aatctctgat aaaaatcaat ctgcggttgg cgatgcacca
    10801 catagtcatc gcctgatatc agaagttgcg tggggagcgt aatcgccgcc gcatctctaa
    10861 taatacgttc agacgtttta tagagatcga gcaagatatt gacggcaatc gcccgtgtga
    10921 tcagcggatc attattgaaa ctcgccaccc gttgccgatc gtgggtcaaa tagcgtcctt
    10981 tcacatagga attaataaaa aacagaccac gcagacgatg ccataacgcc agcgcaggac
    11041 gtgccagcgg cacatacaat ttaaccttaa aggccggaga agccagcacc agcccgcgaa
    11101 ttgcaggcgc ataatcatga acctatgtgg caaccagcac tgcgccgacg ctttgcgcga
    11161 tcacaaccac ctcttccagt ccaacctagc tgtcgctggc agcaaaacgg acaaattcat
    11221 cgacatcctg cactgaacgc gcaagagatg ggctataacc acgcggcccc gaagtttttc
    11281 catgcccccg agcatcccat gcataaaaag cagtatctgg catcgccagt tcatcaacga
    11341 tatgttgtag acgaccagaa tgttcatggc cacgatgaaa taagacaatg acctttttcg
    11401 cccct
//
LOCUS       DADKRT010000138        11298 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.139, whole genome shotgun sequence.
ACCESSION   DADKRT010000138 DADKRT010000000
VERSION     DADKRT010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11298
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.139"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            291..1268
                     /gene="csiD"
                     /locus_tag="JQ356_003099"
     CDS             291..1268
                     /gene="csiD"
                     /locus_tag="JQ356_003099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HAY4623115.1"
                     /translation="MNALIAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQ
                     FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKPLLNRAEGALLINAVGI
                     DDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
                     SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
                     VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ"
     gene            1288..2556
                     /gene="lhgO"
                     /locus_tag="JQ356_003100"
     CDS             1288..2556
                     /gene="lhgO"
                     /locus_tag="JQ356_003100"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417146.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HAY4623116.1"
                     /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTG
                     HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNDIRYDNCGKMLIATSDLEMERM
                     RALWERTAANGIEREWLNAEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQA
                     RGGEIIYNAEVSALSEHKNGVVVRTRQGGEYEASTLISCSGLMANRLVKMLGLEPGFI
                     ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR
                     EGYRKRDFSFNDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS
                     LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK
                     VQTLLASQSNPGRTLRATRSVDALHAAFNQ"
     gene            2579..4014
                     /gene="gabD"
                     /locus_tag="JQ356_003101"
                     /pseudo
     CDS             2579..4014
                     /gene="gabD"
                     /locus_tag="JQ356_003101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311549.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinate-semialdehyde
                     dehydrogenase"
     gene            4028..5294
                     /gene="gabT"
                     /locus_tag="JQ356_003102"
                     /pseudo
     CDS             4028..5294
                     /gene="gabT"
                     /locus_tag="JQ356_003102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417148.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
     gene            5532..6893
                     /gene="gabP"
                     /locus_tag="JQ356_003103"
     CDS             5532..6893
                     /gene="gabP"
                     /locus_tag="JQ356_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005114089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
                     /protein_id="HAY4623117.1"
                     /translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
                     PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW
                     VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
                     IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE
                     IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV
                     LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP
                     YVAVLLSTGAAFLTVVVNYYVPVKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE
                     GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTDLLAIGIICTVPIMAA
                     GIS"
     gene            6952..7614
                     /gene="csiR"
                     /locus_tag="JQ356_003104"
     CDS             6952..7614
                     /gene="csiR"
                     /locus_tag="JQ356_003104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HAY4623118.1"
                     /translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
                     EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGSDEWEA
                     DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
                     YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA
                     GN"
     gene            complement(7615..8064)
                     /gene="kbp"
                     /locus_tag="JQ356_003105"
     CDS             complement(7615..8064)
                     /gene="kbp"
                     /locus_tag="JQ356_003105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium binding protein Kbp"
                     /protein_id="HAY4623119.1"
                     /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDAD
                     KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
                     SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
     gene            complement(8148..8306)
                     /locus_tag="JQ356_003106"
     CDS             complement(8148..8306)
                     /locus_tag="JQ356_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HAY4623120.1"
                     /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
                     AFWVQTRD"
     gene            8489..8788
                     /locus_tag="JQ356_003107"
     CDS             8489..8788
                     /locus_tag="JQ356_003107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY4623121.1"
                     /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
                     TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
     gene            8798..9322
                     /gene="ygaP"
                     /locus_tag="JQ356_003108"
     CDS             8798..9322
                     /gene="ygaP"
                     /locus_tag="JQ356_003108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YgaP"
                     /protein_id="HAY4623122.1"
                     /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
                     VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDRIDGWKRAGLP
                     VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
                     MARLLDKMPWNQRA"
     gene            complement(9369..9773)
                     /gene="stpA"
                     /locus_tag="JQ356_003109"
     CDS             complement(9369..9773)
                     /gene="stpA"
                     /locus_tag="JQ356_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HAY4623123.1"
                     /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
                     NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
     gene            10441..10890
                     /gene="alaE"
                     /locus_tag="JQ356_003110"
     CDS             10441..10890
                     /gene="alaE"
                     /locus_tag="JQ356_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HAY4623124.1"
                     /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
                     RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
                     VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
     gene            complement(10927..11271)
                     /locus_tag="JQ356_003111"
     CDS             complement(10927..11271)
                     /locus_tag="JQ356_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HAY4623125.1"
                     /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
                     GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
                     ERYLNGLFGEAS"
BASE COUNT         2665 a         2858 c         2981 g         2794 t
ORIGIN      
        1 tagtttacta acggtcattt tgcagtgaag ccatttactg ttttttatcg accagataat
       61 ctgttctcta atgttaactc cccctaacct gttgctttag ttattcattt cctgtctcac
      121 tttgccttaa taccctacgt taaatgttac taatttgttg tttttgatca caataagaaa
      181 acaatatgtc gcttttgtgc gcatttttca gaaatgtaga tatttttaga ttatggctac
      241 gaaatgagca tcgccatgtc accctacatc tcataagagg atcgcttctg atgaatgcac
      301 tgatcgccgt acaaaataac gctgtcgatt caggccagga ctatagcgga ttcactctca
      361 tcccgtcggc gcaatccccg cgtctgctgg aactcacctt caccgaacag acgaccaaac
      421 agtttctcga acaggttgcc gaatggcccg tgcaggcgct ggagtacaaa tcgtttctgc
      481 gttttcgggt aggcaaaatt cttgacgatc tgtgtgcgaa tcagctgcaa ccattgctgt
      541 tgaagcccct gctaaaccgt gctgaaggtg cgctgttgat caatgcggtg ggtatcgatg
      601 atgtggcgca ggcagatgag atggtgaagc tggcaacggc ggtagcgcat ctgattggtc
      661 gctcaaattt cgatgcgatg agcggtcagt attacgcgcg tttcgtggtg aaaaatgtcg
      721 ataactcaga cagctatctg cgtcagccgc accgcgtgat ggaactgcac aacgacggca
      781 cgtatgtcga agagatcacc gattacgtgc tgatgatgaa aatcgatgag caaaacatgc
      841 agggtggaaa ttcgttgctg ctgcatctcg atgactggga acatctggac cactatttcc
      901 gccatccact ggcgcgtcgc ccgatgcgct ttgccgcgcc gccgagcaaa aacgtcagca
      961 aagatgtttt ccatccagtg ttcgacgttg atcaacaggg tcgcccggtg atgcgctata
     1021 tcgaccagtt cgtccagcca aaagattttg aagaaggcgt gtggttgagc gagctttccg
     1081 atgccattga aaccagcaaa ggcattcttt ctgtacccgt tcccgttggc aaattcctgt
     1141 tgataaacaa cctgttctgg ctgcacggtc gcgaccgctt tactccgcac ccggatctgc
     1201 gccgtgaact gatgcgtcag cgtggctatt tcgcttacgc cactcaccac taccagacgc
     1261 atcagtaagc gcaaaggaat tgagcggatg tatgattttg tgattattgg cggcggcatc
     1321 atcggcatgt cgaccgccat gcaactgatt gatgtttatc cggatgcccg cattgcgttg
     1381 ctggaaaaag agtccggccc ggcctgtcac cagacgggcc acaacagcgg cgtgatccat
     1441 gccggggtct attacacgcc cggcagcctg aaggcgcagt tttgcctggc gggaaaccgc
     1501 gccaccaaag ccttttgcga tcaaaacgac attcgctatg acaactgcgg caagatgctg
     1561 atcgccacgt ccgatctcga aatggaacgg atgcgcgcgt tgtgggaacg cacggcggcg
     1621 aacggtatcg agcgcgagtg gttaaacgcc gaggaactgc gcgagcgcga accgaatatc
     1681 accgggctcg gcggcatttt tgtgccgtcc agcggcattg tcagctatcg cgaagtcaca
     1741 gcggcaatgg caaaaatctt ccaggccaga ggcggtgaga ttatttataa cgccgaagtc
     1801 agcgccctca gtgagcataa aaacggcgtg gtcgtccgaa cccgtcaggg cggcgaatat
     1861 gaagcatcga cgctgattag ctgttccggg ctgatggcta accggctggt gaaaatgctc
     1921 ggcctcgaac cgggttttat tatctgcccg ttccgtggcg agtatttccg ccttgcgccg
     1981 gagcataacc agattgttaa ccatctgatt taccccatcc ctgacccggc aatgccgttt
     2041 ttgggcgtgc atctcacccg catgatcgac ggcagcgtga ccgtcgggcc aaacgcggtg
     2101 ctggctttta aacgcgaagg ctatcgcaag cgcgacttct catttaacga cacgctggaa
     2161 attttaggct cgtcggggat tcgccgggtg ctgcaaaacc atctacgctc aggactgggc
     2221 gagatgaaaa actcgctgtg caaaagcggc tatctgcggc tggtgcaaaa gtattgtccc
     2281 cggctttcgt taagcgatct ccagccctgg cccgccggtg tgcgggcgca ggcggtatcg
     2341 ccggacggca agctgattga cgattttctg tttgtcacca ccccgcgcac gatccacacc
     2401 tgcaatgcgc cctccccggc agcgacatca gcaattccta ttggtgcgca tattgtcagc
     2461 aaggtacaaa cgctgttggc aagccagagt aaccccggac gcacgctgcg agcgacacgt
     2521 agtgtggatg ccttacacgc cgcatttaat caataacctt tgaaaacagg acgtaacaat
     2581 gaaacttaac gacagtaact tattccgcca gcaggcgttg attaacgggg aatggctgga
     2641 cgccaacaat ggcgggatca tcgacgtcac caatccggcg aacggcgaca agctgggtag
     2701 cgtgccgaaa atgggcgctg atgaaacccg cgccgctatc gacgccgcca accgcgccct
     2761 gcccgccagg cgtgcgctca ccgccaaaga acgcgccaac attctgcgca actggttcaa
     2821 tttgatgatg gagcatcagg acgatttagc gcgcctgatg accctcgaac agggcaaacc
     2881 actggccgaa gcgaaaggcg aaatcagcta cgctgcctct tttattgagt ggtttgccga
     2941 agaaggcaaa cgtatttatg gcgataccat tcccggtcat caggccgata agcgcctgat
     3001 tgttatcaag cagccgattg gcgttaccgc agctatcacg ccgtggaact tcccggcggc
     3061 gatgattacc cgtaaagccg gtccggcgct ggcggcaggc tgcaccatgg tgctgaagcc
     3121 cgccagtcag acaccgttct ctgcgctggc gctggcggag ctggcgattc gcgcgggcat
     3181 tgcggctggc gtgtttaacg tggtcaccgg ttcggcaggc gcggtcggta atgaactgac
     3241 cagcaacccg ctggtacgca aactgtcgtt taccggttcg accgaaattg gccgacagtt
     3301 aatggaacag tgcgcgaaag acatcaaaaa agtgtcgctg gagctgggcg gcaacgcgcc
     3361 gtttatcgtc tttgacgatg ccgatctcga taaagccgtg gaaggcgcgc tggcctcgaa
     3421 attccgcaac gccgggcaaa cctgcgtctg cgccaaccgt ttggcgtgta tgaccgcttt
     3481 gccgaaaaat tgcagcaggc ggtgagcaaa ctgcacatcg gcgacgggct ggataaaggc
     3541 gtcaccatcg ggccgctgat cgatgaaaaa gcggtagcaa aagtggaaga gcatattgcc
     3601 gatgcgctgg agaaaggtgc gcgtgtggtt tgcggcgcta aagcggatga acgcggcggc
     3661 aacttcttcc agccgaccat tctggtggac gtgccggcca acgccaaagt gtcgaaagaa
     3721 gagacgttcg gccccctcgc cccgctgttc cgctttaaag atgaagccga tgtgattgcg
     3781 caagccaatg acaccgagtt tggccttgcc gcctatttct acgcccgtga tttaagccgc
     3841 gtcttccgcg tgggcgaagc gctggagtac ggcatcgtcg gcatcaatac cggcattatt
     3901 tccaatgaag tggccccgtt cggcggcatc aaagcctcgg gtctgggtcg tgaaggttcg
     3961 aagtatggca tcgaagatta cttagaaatc aaatatatgt gcatcggtct ttaactggag
     4021 aatgcgaatg aacagcaata aagagttaat gcagcgccgc agtcaggcga ttccccgtgg
     4081 cgttgggcaa attcacccga ttttcgctga ccgcgcggaa aactgccggg tgtgggacgt
     4141 tgaaggccgt gagtatcttg atttcgcggg cgggattgcg gtgctcaata ccgggcacct
     4201 gcatccgaag gtggtggccg cggtggaagc gcagttgaaa aaactgtcgc acacctgctt
     4261 ccaagtgctg gcttacgagc cgtatctgga gctgtgcgag attatgaatc agaaggtgcc
     4321 gggcgatttc gccaagaaaa cgctgctggt tacgaccggt tccgaagcgg tggaaaacgc
     4381 ggtaaaaatc gcccgcgccg ccaccaaacg tagcggcacc atcgctttta gcggcgcgta
     4441 tcacgggcgc acgcattaca cgctggcgct gaccggcaag gtgaatccgt actctgcggg
     4501 catggggctg atgccgggtc atgtttatcg cgcgctttat ccttgcccgc tgcacggcat
     4561 aagcgaggat gacgctatcg ccagcatcca ccggatcttc aaaaatgatg ccgcgccgga
     4621 agatatcgcc gccatcgtga ttgagccggt tcagggcgaa ggcggtttct acgccgcgtc
     4681 gccagccttt atgcagcgtt tacgcgctct gtgtgacgag cacgggatca tgctgattgc
     4741 cgatgaagtg cagagcggcg cggggcgtac cggcacgctg tttgcggtgg agcagatggg
     4801 cgtggcgccg gatcttacca cctttgcgaa atcgatcgct ggcgggcgtc accgggcgcg
     4861 cggaagtgat ggacgctgtt gcaccgggcg gtctgggcgg cacctatgcc ggtaacccga
     4921 ttgcctgcgt ggctgcgctg gaagtgttga aggtgttcga gcaggaaaat ctgctgcaaa
     4981 aagccaacga tctggggcag aagctaaaag acggattgtt ggcgatagcc gaaaaacacc
     5041 cggagatcgg cgacgtacgc gggctgggag cgatgattgc catcgagctg tttgaagatg
     5101 gcgatcacag caaaccggac gcaaaactca ccgccgggat cgtggcacgc gcccgcgata
     5161 agggcctgat tcttctctcc tgcggcccgt attacaacgt gctgcgcatc cttgtactgc
     5221 tcaccattga agacgctcag atccgtcagg gtctggagat tatcggtcag tgttttgatg
     5281 aggcgaagca gtagcaccgt ccccatgcag gaggcgacgc tgcgcgtctt gtccggccta
     5341 cgagaatcca ggtcggataa ggcgtttacg ccgcatccga caatctgtac gtgaacagga
     5401 ataaatctat gtcggccgga taatgcggag ccgctctccg gcaaaaagaa tcaataacaa
     5461 ttaaacgcgt gacccggcgc gggaaatgtc ggggcgctct cccaagtgac acactttcga
     5521 gaggattcag gatggggcaa tcatcgcaac cacatgagtt aggcggcggg ctgaaatcac
     5581 gccacgtcac catgttgtct attgccggtg ttatcggcgc aagtctgttt gtcggttcca
     5641 gcgtcgccat cgccgaagcg ggcccggcag tattactggc ctatctgttc gccgggctac
     5701 tggtggttat gattatgcgg atgttggcgg aaatggcggt tgccacgccc gataccggtt
     5761 cgttttccac ctatgccgat aaagccattg gtcgctgggc gggctatacc atcggctggt
     5821 tgtactggtg gttttgggta ctggttatcc cgctggaagc caacatcgcc gccatgatcc
     5881 tgcactcgtg ggttccaggc attcccatct ggttattttc cctcgtcatt acccttgcct
     5941 taactggcag taatttatta agcgttaaaa actacggcga atttgagttc tggctggcgc
     6001 tgtgcaaagt catcgctatc ctggccttta ttttccttgg tgcagtcgca attagcggtt
     6061 tttaccctta tgccgaagtg agcgggatct caagattgtg ggatagcggc ggctttatgc
     6121 ccaacggctt cggtgcggta ttaagcgcga tgttgatcac catgttctcg tttatgggcg
     6181 cagaaattgt caccattgcc gccgcggaat ccgacacgcc ggaaaaacat attgtccgcg
     6241 ccactaactc ggttatctgg cgtatttcta tcttctattt gtgctctatt tttgtcgtcg
     6301 tggcattaat tccgtggaat atgcccggac taaaagccgt cggttcttat cgctcggtac
     6361 tggaattgct caatattccc catgcgaaat taatcatgga ctgtgtgata ttactttccg
     6421 taaccagctg cctgaactcg gcgctgtata ccgcttccag gatgctctac tccttaagcc
     6481 gtcgcggaga tgcgcctgcg gtaatgggta aaatcaaccg cagtaaaacc ccgtacgtgg
     6541 cggtgttact ctccaccggc gcggcattct taacggtggt ggtgaactat tacgtgcctg
     6601 tgaaggtatt taaatttctg atcgacagct ccggcgctat cgccctgctg gtttatttag
     6661 tcatcgccgt ttcacagttg cggatgcgca aaattctgcg agcagaagga agcgaaattc
     6721 gcttgcgcat gtggctttat ccctggctca cctggctggt catcggcttt attacctttg
     6781 tgttggtagt gatgctattc cgcccggcgc aacagttaga agtgatctcc accgacttat
     6841 tagcaatagg gattatctgt accgtgccaa ttatggcggc tggaataagc tgataatgtg
     6901 gcaaaaaaca cccgttcata atacgcgctg ataataatca ggagtcacac catgaccatt
     6961 acgtctctgg atggctatcg ctggctgaag aacgatatta ttcgcggtaa ttttcaaccg
     7021 gatgaaaaat tacggatgag tttgctgaca tcgcgttatg cacttggcgt tgggccgttg
     7081 cgggaagcac tttctcaact ggtggcggaa cggctggtca cggtggtgaa tcaaaaaggg
     7141 tatcgggtgg cgtctatgtc agagcaggag ctgctcgata ttttcgatgc ccgcgccaat
     7201 atggaagcga tgttagtgag tctggcgatt gcccgcggta gcgatgagtg ggaggcagac
     7261 gttctcgcaa aagcgcatct gctcagtaag ctggaagcct gtgacgccag cgagaaaatg
     7321 cttgatgagt gggatctgcg tcatcaggcg tttcatacag caattgtggc gggctgtggt
     7381 tctcactatt tgctgcaaat gcgtgaacgg ttgtttgatc tggcggcgcg ctatcgattt
     7441 atctggctgc ggcgaacggt gctttcggta gaaatgctgg aggataaaca cgatcagcac
     7501 cagaccctga ctgcggcggt actggcgcga gataccgcgc gcgccagtga gttaatgcgc
     7561 cagcatttac tgacgccaat tcccattatc cagcaggcga tggctggcaa ttaactactc
     7621 ttccggaata cgcaacactt gccccggata aattttatcc gggcttttta gcatcggttt
     7681 attcgcttcg aagattttat tgtacagatt agcgttaccg tagacctgtt tggaaatggc
     7741 actcagagtg tcgccagact taacggtata aaactggctg gcagtggctg gtgtcgccgt
     7801 tttcacctga tcatcaacac tggcaatacc ggaaatattc cccaccgcaa caaggatttt
     7861 ctccttcgcc tcctgactca ggccgtcacc agtgaccgtc gctttgccgt cggcaatttg
     7921 aatgttcact ttatcggcat caggtatacc ggttttgctc agatgctcct gcaccttctt
     7981 cgcctgatcg tctttatcgt gctgacctgt aaccgcgtcc cagagttttt ctccggcatc
     8041 tttcacaaaa ttgaacagac ccatagctac ctcattcgtt aacggaaaca ctcagaaagt
     8101 gtagcagagg aacgcggcgc gttaacgccg cgggggggag cacaggttta atcgcgggtt
     8161 tgcacccaga acgcgtgaat caaaccgggg atatacccaa gcagtgtcag cagaatatta
     8221 ataatgaacg cccaaccgaa ccctttaccg agcagcacgc cgagcggcgg cagaatgatg
     8281 gtgatgacga ttctccagaa acccatatgt actccctata agaaaattac tcattgttta
     8341 aaaagagatt ttatctctta agcgtagtaa ttttagcgga gcctgccagt ttcagcttac
     8401 gcttttactc tcatttacgc tgctgaggct ggtatatgtt gcatttttag tttagagttt
     8461 acttaattta gaaaatactt aaataaatat gactgaactc gcgcaattac aggccagtgc
     8521 cgaacaggca gcggccttat tgaaagcaat gagccatcct aaacgattgc tgattctgtg
     8581 catgcttagc ggttcccccg gcaccagcgc gggagagctg acgcgcatta ccggactgag
     8641 tgcctctgcg acatcacagc atctcgctcg tatgcgggac gaagggctta tcgacagcca
     8701 acgggatgcc caacgcattc tatattccat taaaaatgag gcggtaaatg ccattatcgc
     8761 caccctgaaa aatgtctatt gtccgtaagg agtcactatg gctttgacaa ccatttcgcc
     8821 gcatgatgca caagaattaa tcgcacgcgg cgcaaagtta atcgatattc gtgacgctga
     8881 tgaatatctt cgtgaacata ttcctgaagc agatctggct ccattatccg tgctggaaca
     8941 gtcaggtctt ccacctaaat tacgtcgcga gcaaattata ttccactgcc aggcaggtaa
     9001 acgcaccagt aataacgccg ataaattagc agcgattgcc gcccccgcag aaatattttt
     9061 actcgaagat aggattgatg gctggaaaag agctggattg ccagtagcgg taaataaatc
     9121 tcaacccttg ccgttaatgc gccaggtgca gatcgctgcg ggtggtttaa tattaatcgg
     9181 cgttgtactg ggttataccg taaatagcgg tttcttctta ttaagtggct ttgttggtgc
     9241 cgggttactg tttgcaggaa tcagcggttt ttgtggaatg gcaaggttgt tagataagat
     9301 gccgtggaac caacgagctt gagaagcgac gccggacgcg ccctagcagc gacatccggc
     9361 ctcagtaatt agatcaggaa atcgtcgaga gatttacctt ctgccagcgc ctgagcaatt
     9421 ggcttcggtg tacggccctg accggtccag gtcttagttt caccgttaac atcagtgaat
     9481 ttatatttcg ccggacgcgg ctggcgtttt ttaccagcac gtggtgcagc agcagagcta
     9541 ttacccaata actcttccgg gttaattccg tcagctttca tcagctccag ccaggtgcta
     9601 attttttcct gacgctcagc cagttcacgc tgctgctgtt cttcttcttc acgtctttct
     9661 ttagtgacaa ccctgaattt ttcgagcatt tcttcaagaa cgtcaatgga gaattcgcga
     9721 gccatcgcac ggagggttcg aatgttattt aaactttgta acattacgga cataataaag
     9781 aaaacctttt aacgccaaaa caaaaaagta tttcgtcgcg tagtgtaagc gatcacttat
     9841 tatatttcca caaaatttaa tctatttaca gtcctgcgcg agattatttc agctgttatt
     9901 ttctgaaact ctcagaataa tttcaagatt atatattagc cattttgatg agtaatttag
     9961 gttattggtg aacagagtgg cgctctctgc tcgctaactc cgcaagcctg ataaaaccga
    10021 agtgaataaa aatgcaatat aacagaataa aagaaaacac ccctcactgg tgctttctgc
    10081 tgttaatgta cattttctgg catcaaaaat gctgtaaatg acccggtcac gacaaacacc
    10141 gaattctcta cgcttatagc gttacctcac ccccaaactt tcattagtga aattaaaggc
    10201 aaggtcatat ccaattgatt taattgaaaa taaatcatat cggcatgtaa aaatccacaa
    10261 tgtacaaaaa acgagctgtt acggaatatt ttatctacaa aaaactgact aaataaaagt
    10321 ttttcactaa ttgattagtc atagccagcg atatacgcta tgcgaaaatg cagatggcaa
    10381 tgagatccac tgctttcatc tccattaaca tcccattacg ctttattaag gagcattagc
    10441 atgttctcac cgcagtcacg cttgcgtcat gcagttgcag atacgttcgc gatggttgtt
    10501 tactgttctg tcgtgaacat gtgtattgaa gttttcctct ccggaatgag cttcgaacag
    10561 tctttttatt ccagattggt agcgattccg gtgaacatct taattgcatg gccatacggt
    10621 atgtaccgcg atctgtttat gcgcgcggca cgcaaagtta gcccgtcggg ctggataaaa
    10681 aatctggctg atatcctggc ttatgtgacg ttccagtcac cggtgtatgt ggcgatcttg
    10741 ttagtggtgg gcgcagactg gcatcagatt atggcggcgg tcagttcaaa catcgttgtt
    10801 tcgatgttga tgggggcggt ttatggctac ttcctcgatt attgccgccg actgtttaaa
    10861 gtcagccgtt accagcaggt aaaagcctga ctcttctttt cgcgactggc atcgccagtc
    10921 gcgtctttaa ctggcttcgc caaataaacc attcaaataa cgttcaagcg caacacgcga
    10981 actgaagcca tgcgggatac cgtaatgctc gtgtcgctcg cctgctaaat agagcggaaa
    11041 ttgctggtaa tgatcgcaag ttttaatatc ggaagcgggt tcagccagtg ttgaactgcg
    11101 ttcttttaat gttggatgaa ttaccagagc ggtacgtccc attcgcgctt cgcgattaac
    11161 atagacataa ttttccccac ggcggtaacc atacgctttc tgggttacca catcgacagt
    11221 aaaaccgact ttttcaagta cgcgcgccac ctcgtctggt cgtaaataca tatttgatcc
    11281 tcgttatttt caaccgcg
//
LOCUS       DADKRT010000139        11266 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.140, whole genome shotgun sequence.
ACCESSION   DADKRT010000139 DADKRT010000000
VERSION     DADKRT010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11266
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.140"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..790
                     /locus_tag="JQ356_003112"
     CDS             <1..790
                     /locus_tag="JQ356_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4623126.1"
                     /translation="DSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQT
                     GVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGVWVDGMGSPSTGD
                     FHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITY
                     DCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQ
                     NGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVMVR"
     gene            complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="JQ356_003113"
     CDS             complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="JQ356_003113"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HAY4623127.1"
                     /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALVAEIHGVKKNA
                     LYKYALEQQG"
     gene            1757..3784
                     /locus_tag="JQ356_003114"
     CDS             1757..3784
                     /locus_tag="JQ356_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HAY4623128.1"
                     /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQ
                     ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKT
                     LLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
                     QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
                     DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI
                     QQGFEAAKNIGTQPVAAQVAAADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQPVP
                     VSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEEL
                     LKSNTPLNVLVLNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSS
                     LGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGTPITPRATTDSG
                     MTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGAMLYAS
                     SRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDA
                     WSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS"
     gene            3742..4137
                     /locus_tag="JQ356_003115"
     CDS             3742..4137
                     /locus_tag="JQ356_003115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HAY4623129.1"
                     /translation="MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVN
                     ERGGEIDLIMREGWTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
                     FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
     gene            4157..4747
                     /gene="diaA"
                     /locus_tag="JQ356_003116"
     CDS             4157..4747
                     /gene="diaA"
                     /locus_tag="JQ356_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HAY4623130.1"
                     /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
     gene            4757..5332
                     /gene="yraP"
                     /locus_tag="JQ356_003117"
     CDS             4757..5332
                     /gene="yraP"
                     /locus_tag="JQ356_003117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HAY4623131.1"
                     /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
                     GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
                     LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
     gene            complement(5452..6003)
                     /locus_tag="JQ356_003118"
                     /pseudo
     CDS             complement(5452..6003)
                     /locus_tag="JQ356_003118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312059.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
     gene            complement(6076..6711)
                     /locus_tag="JQ356_003119"
     CDS             complement(6076..6711)
                     /locus_tag="JQ356_003119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HAY4623132.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV
                     FNPHDPQLSDALAQVTEPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE
                     TLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPEHEGVTILSSSELRKRAE"
     gene            6839..7357
                     /gene="yhbO"
                     /locus_tag="JQ356_003120"
     CDS             6839..7357
                     /gene="yhbO"
                     /locus_tag="JQ356_003120"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HAY4623133.1"
                     /translation="MSKKIAVLISDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK
                     GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(7337..7780)
                     /locus_tag="JQ356_003121"
     CDS             complement(7337..7780)
                     /locus_tag="JQ356_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HAY4623134.1"
                     /translation="METLITISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
                     ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN
                     HRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
     gene            7831..8133
                     /gene="yhbQ"
                     /locus_tag="JQ356_003122"
     CDS             7831..8133
                     /gene="yhbQ"
                     /locus_tag="JQ356_003122"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708956.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage response exodeoxyribonuclease YhbQ"
                     /protein_id="HAY4623135.1"
                     /translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
                     ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD"
     gene            complement(8120..8623)
                     /locus_tag="JQ356_003123"
     CDS             complement(8120..8623)
                     /locus_tag="JQ356_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY4623136.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY
                     HEHFNRF"
     gene            complement(8617..9141)
                     /locus_tag="JQ356_003124"
     CDS             complement(8617..9141)
                     /locus_tag="JQ356_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HAY4623137.1"
                     /translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADVSDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
                     TAPETKQTSVGEPC"
     gene            9350..10330
                     /locus_tag="JQ356_003125"
     CDS             9350..10330
                     /locus_tag="JQ356_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY4623138.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPNIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
                     RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKADPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
     gene            10339..11217
                     /locus_tag="JQ356_003126"
     CDS             10339..11217
                     /locus_tag="JQ356_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312067.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY4623139.1"
                     /translation="MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRA
                     TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
                     CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
                     QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
                     GIQTMSGYVYNLGNELTSMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLLLTANS
                     DCNGYWRRLAGLELQA"
BASE COUNT         2754 a         3050 c         2940 g         2522 t
ORIGIN      
        1 tgacagcctg gatattaaaa ccacattaca ggcaaacgac attccaggac tcacaaccga
       61 ccaggttgtc tctgttaaca cccgattcac acagataaaa agcagcaccg tatattctgc
      121 tgcaacccaa acgggtgttt gccagggtga cacgtctcgt tatggacccg ttaatattgg
      181 tgcaaatacc acctttaccc tgtatgtcac caagccattt ctcggctcga tgaccattcc
      241 gaaaacggat attgccgtca ttaaaggcgt gtgggtcgat ggaatgggaa gcccgtctac
      301 aggtgacttc catgatttag tcaagttatc gattcaggga aatctcaccg ccccacagtc
      361 gtgcaaaatt aatcagggcg atgttattaa ggttaatttt ggattcatca atggtcagaa
      421 gtttaccacc cgcaatgcca tgccagacgg ttttactcca gtagactttg atatcactta
      481 tgactgtggt gatacttcaa agattaaaaa ctcgttgcaa atgcgcatcg acggtacaac
      541 tggggtagta gaccagtaca acctggtcgc caggcgaaga agttcagaca atgtgcccga
      601 tgtcggtatt cgtattgaaa atctcggcgg cggagttgca aatattcctt ttcagaacgg
      661 tatccttccc gttgatcctt ccgggcatgg caccgtcaat atgcgcgcct ggccagttaa
      721 tctggtcggt ggtgagctgg aaacaggaaa atttcagggc acagccacca ttaccgtcat
      781 ggtgcggtaa aagaagacgt tgcgttttga ttaacgcaac gcttcggcac tgttacccct
      841 gctgctccag cgcatactta tacagcgcat ttttcttcac gccatgaatt tctgcgacca
      901 gcgccgccgc ttttttcagc ggcagttctg cctgtagcag cgccagcgtg cgcagggcat
      961 cggcgggtaa gtcttcttcc tgtgctttat gaccttcgac aatcagcacc atttcgcctt
     1021 tgcgacggtt ttcatcttcc tttacccacg ccagcagttc gccaacgggc gcgccgtgaa
     1081 tggtttccca ggttttggtc agctcacgcg ccagaaccac gtagcgggat tcgcctaata
     1141 ccgcaacgat atcttccagg ctatctaaca gacggtgggt ggattcataa aaaatcagcg
     1201 tgcgcggctc cgcttcaatg gcttttagcg catcacggcg gccttttgat ttggcaggta
     1261 aaaagccttc gtaacagaaa cggtcagagg gtaaacccgc ggcgcttaac gcagtgatag
     1321 cagcacacgg cccgggtagc ggcaccacgc gaatccccgc ttcacggcag gtacgcacca
     1381 gatggtagcc aggatcgtta attagcggcg ttccggcatc ggaaaccagc gcaatgtttt
     1441 gcccctcttg cagcttcgcc agcagcgttt cggctttttg ttgttcgtta tggtcgtgca
     1501 gcgcaaacaa ccgggcatta atcccaaaat gttgcagcaa taaaccggtg tgacgagtat
     1561 cctcggcggc aatcagatca acggcctgta atacctctaa cgcacgctgg gtgatatccg
     1621 ccagattgcc gattggcgtc ggtacaatgt aaagctggcc ctgagaatta tccgccgatt
     1681 ggtgttgttt cattgtgtcg tccgtattgc cgatttaata ttgagcattg cgtaaaaaaa
     1741 tatcactgga tacattatgg taccctcaac attttctcgt ttgaaagccg cgcgttgtct
     1801 gcctgttgtt ctggcagccc tgattttcgc cggttgtggc acccatactc ccgatcagtc
     1861 cactgcttat atgcagggca cagcgcaggc tgattctgcc ttttatcttc agcagatgca
     1921 gcaaagctct gatgatacca ggatcaactg gcaattactc gccattcgtg cactggtgaa
     1981 agaaggtaaa accgggcagg cggttgagtt gtttaaccaa ctaccgcaag aactgaacga
     2041 ttctcagcgt cgcgagaaaa cactgctggc ggtagagatt aaactggcgc agaaagattt
     2101 tgctggcgcg caaaacttgc tggcgaaaat cacacctgcc gatttagaac aaaaccagca
     2161 agcgcgttac tggcaggcaa aaatcgatgc cagccagggg cgtccttcca ttgatttact
     2221 gcgcgcgtta attgctcagg aaccgctgct cggcgcgaaa gaaaaaaagc agaatattga
     2281 tgccacctgg caggcgctct cctccatgac tcaggaacag gcgaatacgc tggtgatcaa
     2341 cgccgacgaa aatattctgc aaggctggct ggatctgcag cgcgtctggt ttgataaccg
     2401 taacgatccc gatatgatga aagccgggat cgccgactgg cagaaacgtt atccgaacaa
     2461 tccgggcgcg aaaatgctgc caacgcagtt ggttaacgta aaagcgttta aaccagcctc
     2521 gaccaacaaa atcgccctgc tgttgccgct gaatggccag gcagcggtat ttggtcgcac
     2581 tattcagcaa ggctttgaag cggcgaaaaa tatcggcact cagccagtgg cggctcaggt
     2641 agctgccgca gacgtagcag aacaacctca gccgcaaact gcggatggcg ttgccagccc
     2701 ggcacaagcc tcggttagcg atctgaccgg tgatcagcct gcggcccagc cggtgcctgt
     2761 aagcgccccg gcgacaagca ccgcagcggt aagcgcaccc gcaaatccat ccgcagagct
     2821 gaaaatctac gatacctcat cacaaccact tagccagatc ttaagccagg ttcagcagga
     2881 tggcgcgagt attgtggttg gtccgttgct gaaaaataac gttgaagagt tgcttaagag
     2941 caacaccccg ctgaacgtgc tggtactgaa ccagccggag aatatcgaaa accgcgtcaa
     3001 tatttgttac ttcgcgcttt caccggaaga cgaagcgcgc gatgcagcgc gtcatattcg
     3061 tgaccagggt aaacaagcgc cgctggtgct gatcccacgc agttcattgg gcgatcgcgt
     3121 agccaatgcg tttgcgcagg agtggcagaa actgggcggc ggcaccgttc tgcaacaaaa
     3181 atttggttcc accagcgaat tacgcgcggg tgttaacggc ggttctggta tcgctttaac
     3241 gggtaccccg attactccca gagcgacaac cgactccggc atgacgacca acaatccaac
     3301 gctgcaaacc acgccaaccg atgaccagtt caccaataat ggcggtcgtg tcgatgcggt
     3361 gtacattgtg gcaacgccgg gtgaaatcgc ttttatcaaa ccgatgatcg ccatgcgtaa
     3421 cggtagccag agcggtgcaa tgctgtacgc cagctcccgc agcgcacaag gcaccgcagg
     3481 cccggatttc cgtctggaga tggaaggttt gcagtacagc gaaatcccga tgctggcggg
     3541 cggtaatctg ccgttaatgc agcaggcact cagcgcggtg aataacgatt attcactggc
     3601 tcgcatgtat gcgatgggcg tcgatgcctg gtcgctggca aatcatttct cacaaatgcg
     3661 ccaggttcag ggttttgaaa tcaacggtaa taccggaagc ctgacggcaa acccggattg
     3721 cgtgattaac aggaagttat catggctaca gtaccaacaa ggtcaggtag tccccgccag
     3781 ttaaccacca aacagaccgg cgatgcgtgg gaagtacaag cgcgtcgctg gctggaaggc
     3841 aaaggactgc gatttgtcgc cgctaacgtg aacgagcgtg gcggtgagat cgatctgata
     3901 atgcgtgaag gctggaccac cgtttttgtc gaggtgcgtt accgccgctc tgcgctttat
     3961 ggcggcgcgg cagccagtgt gacccgcagc aaacaacaca aattattaca gactgcccgc
     4021 ttgtggctcg cgcgtcataa tgggagtttt gatactgtgg attgccggtt cgatgtggta
     4081 gccttcaccg ggaatgaggt tgagtggatt aaggatgcct ttaatgacca ctcataatta
     4141 aggtttaagg attagcgtgc aagaaagaat taaagcttgc ttcactgaaa gcattcaaac
     4201 tcaaattgcg gcggcagagg cgcttccgga tgccatctcc cgtgcagcca tgacgctggt
     4261 tcagtctctg ctcaatggca acaaaatcct ctgttgtggt aatggaactt ccgctgccaa
     4321 tgcacagcat tttgctgcca gcatgatcaa ccgtttcgaa acggagcggc ccagcttacc
     4381 tgccattgca ctaaatactg ataatgttgt cttaacggcg attgccaacg atcgcttaca
     4441 tgatgaagtg tatgcaaaac aggtgcgggc gctgggtcat gcgggagatg tattgttagc
     4501 catttccacc cgtggcaaca gccgcgatat tgttaaagca gttgaagccg ccgttacgcg
     4561 tgatatgacc attgtggcat tgaccggcta tgacggcggc gaacttgcag gtttgttagg
     4621 gccacaggat gtggagatcc gcattccttc gcatcgtagt gctcgcattc aggaaatgca
     4681 tatgctgacg gtaaattgcc tgtgcgatct gatcgataac acgcttttcc ctcaccagga
     4741 tgattaagga gaatacatga aggcattatc gccaatcgca gtccttattt ccgcgctgct
     4801 gttgcaaggt tgtgttgccg ctgccgtagt gggtaccgct gctgtgggta ccaaagccgc
     4861 aactgaccca cgcagtgtcg gtacccaggt ggacgatggt accctggaag tgcgcgtgaa
     4921 cagcgcattg tcgaaagacg aacagattaa gaaagaaacc cgtattaatg tcacggcgta
     4981 tcagggcaaa gtgctgctgg ttgggcagtc accaaatgct gaactttcgg ctcgcgccaa
     5041 acagattgct atgggcgtag acggtgccaa cgaagtgtat aacgagattc gtcagggcca
     5101 gccgattggt ctgggcgaag catctaacga tacgtggatc accaccaaag tgcgttcgca
     5161 gctcttaacc agcgacctgg tgaaatcgtc caacgtgaaa gtgaccaccg aaaacggtga
     5221 agtgttcctg atggggctgg tgactgaacg tgaagcgaaa gcggcggcag atattgccag
     5281 ccgggtgagc ggcgtaaagc gggtaaccac agcgtttacg tttattaaat agcagcccct
     5341 tgtaatgcct gatgcgacgc ttgccgcgtc ttatcaggcc tacaacgatg caaaccgtag
     5401 gtcggataag gcgtttacgc cgcatccgac atgttttccc tcaaatcaga acaacagcgc
     5461 cagcccggcc accagacaaa tcgccgcaaa accccagccg aggacaaacc ccataaacac
     5521 cagcgtcgcc gggtttaaca ccggattgcc catccagaat gccagcgcac cgcccatcga
     5581 tacctgttgg cgacgcatcc ccgccgcgac cggagccgca cagcaggtac acatcatgcc
     5641 cggcagcgaa aacagcgttc ccagcagcgt gccgcgaaag cgcgattgcc caagcgtacg
     5701 caacaaccag tcacgcggga tcagcacctg aatcaacgaa ccgaggatca cccccagcac
     5761 cgccgctttc catactgcga ggaaatagat catcgcgtaa tccaacgccg cttgccacgg
     5821 attagcatcc gcctgcgcaa ggatagattt accgatactg tgggtttcgg ctgcagtaaa
     5881 cgctttgccg tagtaatgtt gccatttcac ataccagaga ccggcaatga caacgagaaa
     5941 gaaaagcgcg ggtttccacc actgaatggg tgttgccgcc tgagatgaag actgaccagt
     6001 catagcattc cctaggaata agttatgata attgagcgcg tgaatattac gctcactatc
     6061 aattcttggg aataattatt cagctctttt gcgtaattct gaagagctta aaatcgtcac
     6121 gccttcatgc tcaggccgca tcgcctctgc cagcatgacc cgcgccacgt ctctcgcatc
     6181 aatggatttc cagttacctg gtaacaaacg gaacagcggc gcaaaaagcg tttcgttcat
     6241 ccgctgtttg ctacgatcgc ccagtaacat cgacgggcga gcaatggtca atttcggcca
     6301 gttctgggca attaatgctt cttccatctc ccctttgacg cggttataga aaaacggcga
     6361 gtgggcattg gcccccatag cactgaccac cagcatatgc tgcgcgccca gccgccgccc
     6421 ggttaatgcg gtatccacta ccagcgtgta atcggcatga ataaacgcct ctttgctccc
     6481 cgcttctcgc cgcgtggtgc cgagacaaca aaacacaatg tcgatgggtt cggtgacctg
     6541 cgccaacgcg tcactcagtt gcggatcatg gggattaaac accccgggca tatcgcccaa
     6601 cggacgtcgc gtcggcgcag caatggcgtt aactttcggt tcattaatca acatccgcag
     6661 caggtgaccg cccaccagcc ccgttgcgcc tgtaatcagt acctgactca tcttcgctcc
     6721 tttacagaat tgtctgcctt gcgctccacg gctcatgcac cagtcttaat agaccatgag
     6781 gtaattatcc ccgattgtgg gaaattcgcc tcatccaatg caacaacgcg gaggaagcat
     6841 gagtaagaaa attgccgttt taatcagtga tgaatttgag gattcagaat ttacttcacc
     6901 cgcagacgag ttccgtaaag ccggacacga agtaattacc attgaaaagc aagcgggtaa
     6961 aacggtgaaa ggcaaaaaag gagaagccag cgtgaccatc gataaatcca tcgatgaagt
     7021 gacgccagcg gagtttgatg ccctgctgct accgggcggc cattcaccgg attatctgcg
     7081 tggggacaac cgttttgtca cctttacccg tgattttgtg aatagcggca aacctgtttt
     7141 cgccatctgt cacggtccgc agctgctgat cagcgccgat gtgattcggg ggcgcaaact
     7201 gaccgcagtt aaaccgatca ttattgatgt taaaaatgcg ggcgcggaat tttacgatca
     7261 ggaagtcgtg gttgataaag atcagctggt taccagccgg acaccggacg atctgccagc
     7321 gtttaaccgc gaggcgttac gcctgctcgg tgcctgagtc gcgtagccaa atcatttttt
     7381 taccaaagcc cagcgtgttg tcggtgaatt tgatttcatc gagccggatt tcccacaccg
     7441 gggccgacag cattctggca accggaaagc gatgattgta cgccttgcgc gcgaggtcgc
     7501 tttcctcacc ttccagcctg cggatctcac ctttaaactg cacaccgcga attaacgcta
     7561 ccgttttcgg ctgaccgttt accgttccgg caaccgcagc ctgcggccca ctcatctgcg
     7621 cgtggcgcgt tttttcttcc gtcaaaatgt agaaggcgac tttctgcgca tcaaacagat
     7681 aaaaagcatt agcgcaccac agttcccctt cctgctgcac acaccaggtg acaacatgtt
     7741 gttttgccaa ccaacggctg atggtgatga gtgtttccat tgctgttctc ttttatactg
     7801 tgggcctgac cttaacatgc gacgcagacg atgacaccct ggtttcttta cttgatccgt
     7861 accgccgaca ataagcttta taccgggatc accacggatg tcgaacgccg ctatcagcag
     7921 caccaaagcg gcaaaggggc gaaagcactg cgcgggaaag gagaactgac gctggcgttt
     7981 tctgcgccag tgggcgaccg ttcgctggca ctacgggcgg aatatcgcgt taagcaactg
     8041 accaaacggc aaaaagagcg tctggtagcg gaaggcgcag ggtttgcaga actgttgagc
     8101 agcctgcaaa ccccggagat taaaagcgat tgaaatgctc gtgatactca accagaccgg
     8161 ttacgccatt cagcgcgtca tccgctaaac gatgtacctg gaaggcgctt tcagtgcccg
     8221 gccagcggca acgcagatcg tgatgcgccg ccagttcaaa gccgaaacga ctgtacagcg
     8281 ccggatcgcc cagcgtcacc actgcggcat agccgaactc attaagcgaa tcgagtcctt
     8341 catagaccag ttggcgtgcc agcccctgtc cacggtattt ttcatcaacc gccaacggtg
     8401 ccatgccgac ccattgcagg tcttcgccct gcacatcaac cggactaaat gccacatagc
     8461 caatgacctg accttcgtca tctgtcgcca ccagccccag cgtcagaaag ccatcttcac
     8521 gcagatcgtg aaccagcttc gcttccgcat cactttcgaa tgagcgacgc agcagggcat
     8581 caatacccgg cgcatcaatg ggaatttcta ctcgaattag catggttcac ctaccgatgt
     8641 ctgtttggtt tcaggcgcgg ttttcattcc cgcctcaaca aaatccgcca gttgcagcag
     8701 catcatgcgt aaggctttcg gcatttgctc cagttcaatg gcgtccatca ggtttttcac
     8761 atgcagcccc agctccgtat cgccttcaat caccagccga cgctggaaga agagcgtatc
     8821 tggatcttgt ttacgcgccg caatcatcag cagatcgctg acgtcggcac taaaactcac
     8881 atcagcttgc gcgttctggc tgaccaccag tttgccattc accaccgagg taaaccattg
     8941 caggtcaata tcacgcacat gaatacttaa ccagcggcct tcaagaaact ccagctcgcc
     9001 atcatccagc gcctgacgga attgccagct taagacctgc tcaagaacct ggcgttttag
     9061 cgcaaatggc gtcagtttta ccggtacact caacagagat ggccccaaat gcacaatacg
     9121 ggaacgaagt ttatccaaca cgagttttac tccctgtttc aacaatcatc ctattttgcc
     9181 atatcagaaa aataacatag cggtataaat caacaattcc atatgaaatt gctgctacca
     9241 ccaatacaac tttaactgcc ttaaatcaaa aattgtcgca gcaaggttaa ctaaaatccc
     9301 agttcgttaa catttttgcg ttttgatagc gcaaccttca ggaaaaatta tggagctgct
     9361 ctgccctgcc ggaaatctcc cggcgcttaa ggcggccatc gaaaacggcg cagatgctgt
     9421 ttatatcggg ctaaaagatg ataccaatgc ccgtcacttc gccggcctta actttaccga
     9481 gaaaaaattg caggaagcgg tgagttttgt ccatcaacat cgccgcaaac ttcacatcgc
     9541 gattaacact tttgcgcatc cggacggtta cgcccgttgg cagcgcgccg tggatatggc
     9601 ggcgcagctg ggtgccgacg cgctgatcct cgccgacctc gccatgctgg aatacgccgc
     9661 cgagcgttat ccgaatattg agcgccacgt atcggtgcag gcttcggcga ccaatgaaga
     9721 ggcgattaac ttttatcatc gccattttga cgttgcccgc gtggtgctgc cgcgcgtgtt
     9781 gtcgattcat caggtgaaac agctggcacg ggtcacacct gtaccactgg aagtgtttgc
     9841 tttcggcagc ctgtgcatta tgtcggaagg ccgttgctat ctgtcgtcgt atctgacggg
     9901 tgagtcgcct aacaccgtgg gcgcgtgttc tccggcccgt ttcgtgcgct ggcaacaaac
     9961 gccgcagggg ctggaatccc gcctgaacga agtgctgatc gaccgttatc aggacggcga
    10021 aaacgcaggt tatccgacgc tgtgtaaagg gcgttatctg gtggacggcg agcgctatca
    10081 cgcgctggaa gaaccaacca gtctcaatac cttggaactg ctgccggagt taatggcggc
    10141 gaatattgct tcggtgaaaa ttgaaggccg ccagcgtagc ccggcgtatg tcagccaggt
    10201 ggcgaaagtc tggcgtcagg ctatcgaccg ttgtaaggcc gatccgcaaa gcgcgtggat
    10261 ggagacgctc gggtcgatgt ccgaaggcac gcagaccacc cttggcgcgt atcaccgtaa
    10321 atggcagtga gaagagcaat gaaatattcc ttagggccag tgctgtggta ctggccaaaa
    10381 gagacgctgg aagattttta tcagcaggcc gccaccagca gcgccgacgt gatttatctt
    10441 ggagaagcgg tatgcagcaa gcgccgggca accaaagttg gcgactggct ggagatggca
    10501 aaatcgctcg ccggaagtgg caagcagatt gtgctctcca cgctggcgct ggtgcaggca
    10561 tcctctgaac tgggcgaact gaaacgctat gttgagaacg gtgagtttct gattgaagcc
    10621 agcgatctcg gcgtggtgaa tatgtgcgct gaacgcaaac tgccgttcgt cgccgggcac
    10681 gcgctgaact gctacaacgc ggtgacgctg aaaatattgc tcaaacaggg catgatgcgc
    10741 tggtgtatgc cggtggagct ttcccgcgac tggctggtga atctgcttaa tcagtgcgat
    10801 gagctgggca ttcgcaacca gtttgaagtg gaagtcctga gctacggtca tctaccgctg
    10861 gcctactccg ctcgctgctt taccgcgcgt tcggaagacc gcccgaaaga tgagtgtgaa
    10921 acctgctgca ttaagtatcc gaacgggcgc aacgtgctgt cgcaggaaaa ccaacaagtg
    10981 tttgtactca atggcattca gaccatgagc ggctacgttt acaacctcgg taacgagctg
    11041 acatccatgc agggattggt tgatgtggtc cgcctgtcac cgcagggtac tgacactttc
    11101 gcgatgctcg acgccttccg cgctaatgaa aatggcgctg cgccactatt gttgacggca
    11161 aacagcgact gtaacggcta ctggcggcgg ctggcaggac tggagctgca agcctaagta
    11221 aatatgctcg tcatacttca agttgcatgt gctgcatctg cattcg
//
LOCUS       DADKRT010000140        11264 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.141, whole genome shotgun sequence.
ACCESSION   DADKRT010000140 DADKRT010000000
VERSION     DADKRT010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11264
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.141"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..700
                     /gene="hdhA"
                     /locus_tag="JQ356_003127"
                     /pseudo
     CDS             1..700
                     /gene="hdhA"
                     /locus_tag="JQ356_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310354.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="7-alpha-hydroxysteroid dehydrogenase"
     gene            929..1519
                     /locus_tag="JQ356_003128"
     CDS             929..1519
                     /locus_tag="JQ356_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY4623140.1"
                     /translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS
                     PGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQR
                     ALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLL
                     DLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS"
     gene            1907..3718
                     /gene="uidA"
                     /locus_tag="JQ356_003129"
     CDS             1907..3718
                     /gene="uidA"
                     /locus_tag="JQ356_003129"
                     /EC_number="3.2.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucuronidase"
                     /protein_id="HAY4623141.1"
                     /translation="MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRA
                     IAVPGSFNDQFADADIRNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQ
                     EVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSY
                     FHDFFNYAGIHRSVMVYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRD
                     ADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAV
                     KDEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA
                     EEMLEWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAI
                     KELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
                     AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVD
                     TLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGN
                     KKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ"
     gene            3715..5088
                     /gene="uidB"
                     /locus_tag="JQ356_003130"
     CDS             3715..5088
                     /gene="uidB"
                     /locus_tag="JQ356_003130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide transporter"
                     /protein_id="HAY4623142.1"
                     /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAA
                     AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD
                     WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV
                     CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLK
                     ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYERYVLNDTGLFTVLVLVQNLVG
                     TVASAPLVPGMVARSGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG
                     VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI
                     ANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQ
                     LISDITN"
     gene            5127..6392
                     /gene="uidC"
                     /locus_tag="JQ356_003131"
     CDS             5127..6392
                     /gene="uidC"
                     /locus_tag="JQ356_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide uptake porin UidC"
                     /protein_id="HAY4623143.1"
                     /translation="MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRA
                     DKPSAGAGRDIYAWVQRGLFDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGD
                     KSFGFALGAVKIKPCENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
                     YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDT
                     SRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETA
                     LVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVN
                     YRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKG
                     REKRDGSTLGDRLNYWDVKMSIQYDFMLK"
     gene            complement(6618..8126)
                     /locus_tag="JQ356_003132"
     CDS             complement(6618..8126)
                     /locus_tag="JQ356_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HAY4623144.1"
                     /translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL
                     KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
                     LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
                     PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
                     TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY
                     QEKVTEAFFSALPLMLKGDPVITVAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA
                     QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
                     LTTLQDNTITTSLQYTNGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ"
     gene            complement(8227..9402)
                     /gene="manA"
                     /locus_tag="JQ356_003133"
     CDS             complement(8227..9402)
                     /gene="manA"
                     /locus_tag="JQ356_003133"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HAY4623145.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
                     SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
                     RNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
                     VAGAHPAIAHFLQQPNAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIR
                     LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
                     ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
     gene            9601..11247
                     /locus_tag="JQ356_003134"
     CDS             9601..11247
                     /locus_tag="JQ356_003134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HAY4623146.1"
                     /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGCDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL
                     LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
                     IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
BASE COUNT         2810 a         2635 c         2907 g         2912 t
ORIGIN      
        1 ttggtaaaga aatcgccatt acattcgcga cagctggcgc atctgtggtg gtcagtgata
       61 ttaacgccga cgcagctaac catgttgtag acgaaattca acaactgggg gggcaggcat
      121 ttgcctgccg ttgtgatatt acttccgaac aggaactctc tgcactggca gatttgctat
      181 cagtaagctg ggtaaagttg atattctggt taacaacgcc ggtggcggtg gacctaaacc
      241 gtttgatatg ccaatggcgg attttcgccg tgcttatgaa ctgaatgtgt tttctttttt
      301 ccatctgtca caacttgttg cgccagaaat ggaaaaaaat ggcggtggcg ttattctgac
      361 catcacttct atggcggcag aaaataaaaa tataaacatg acttcctatg catcatctaa
      421 agctgcggcc agtcatctgg tcagaaatat ggcatttgac ctgggtgaaa aaaatattcg
      481 ggtgaatggc attgcgccgg gggcaatatt aaccgatgcc ctgaaatccg ttattacacc
      541 agaaattgaa caaaaaatgt tacagcacac gccgatcaga cgtctgggtc aaccgcaaga
      601 tattgctaac gcggcgctgt tcctttgctc gcctgcagcc agctgggtaa gcggacaaat
      661 tctcaccgtc tccggtggtg gggtacagga gctcaattaa tacactaacg aaccggtaaa
      721 cagccgtatg tgttgtttac cgggatagcg tgtgcaattc atcaacgtct ctgctaaaca
      781 actggcagcc aaatcacggc tattggttaa ccaatagctg gatgaaaagc atacgaatag
      841 agtgtgcctt cgcactattc aacagcaatg ataggcgctc acctgacaac gcggtaaact
      901 agttattcac gctaactata atggtttaat gatggataac atgcagactg aagcacaacc
      961 gacacggacc cggatcctca atgctgccag agagattttt tcagaaaatg gatttcacag
     1021 tgcctcgatg aaagccatct gtaaatcctg cgccattagt cccgggacgc tttatcacca
     1081 tttcatctcc aaagaagcct tgattcaggc gattatctta caggaccagg agagggcgct
     1141 ggcccgtttc cgggaaccga ttgaagggat tcattttgtt gactatatgg tcgagtctat
     1201 tgtctctctc acccatgaag cctttgggca acgggcgctg gtggtcgaaa ttatggcgga
     1261 agggatgcgt aacccacagg tcgccgccat gcttaaaaat aagcatatga cgatcactga
     1321 atttgttgcc cagcggatgc gtgatgccca gcaaaaaggc gagataagcc cagacatcaa
     1381 cacgtcaatg acttcacgtt tactgctgga tctgacctac ggtgtactgg ccgatatcga
     1441 agcggaagat ctggcgcgtg aagcgtcgtt tgctcaggga ttacgcgcga tgattggcgg
     1501 tatcttaacc gcatcctgat cctctcattt cgcgggctgg tgataactgt gcccgcgttt
     1561 catactttaa tttccctgta caaaatacaa tctagccggg atcggagaat tcccccccaa
     1621 aatattcacc gtagccatat gtcatgagag tttatcgttc tcaagatgcc cgaacgaacg
     1681 ttcgattgct tattttatgg cttctgtcaa cgctgtttta aagattaatg cgatctatat
     1741 cacgctgtgc gtattgcaga ttttggtttt ttgatcgcgg tgtcagttct ttttatttcc
     1801 atttctcttc catgggtttc tcacagataa ctgtgtgcaa cacagaattg gttaactaat
     1861 cagattaaag gttgaccagt atttttattt gaatgaggag tcccttatgt tacgtcctgt
     1921 agaaacccca acccgtgaaa tcaaaaaact cgacggcctg tgggcattca gtctggatcg
     1981 cgaaaactgt ggaattgatc agcgttggtg ggaaagcgcg ttacaagaaa gccgggcaat
     2041 tgctgtgcca ggcagtttta acgatcagtt cgccgatgca gatattcgta attatgtggg
     2101 caacgtctgg tatcagcgcg aagtctttat accgaaaggt tgggcaggcc agcgtatcgt
     2161 gctgcgtttc gatgcggtca ctcattacgg caaagtgtgg gtcaataatc aggaagtgat
     2221 ggagcatcag ggcggctata cgccatttga agccgatgtc acgccgtatg ttattgccgg
     2281 gaaaagtgta cgtatcaccg tttgtgtgaa caacgaactg aactggcaga ctatcccgcc
     2341 gggaatggtg attaccgatg aaaacggcaa gaaaaagcag tcttacttcc atgatttctt
     2401 taactatgcc gggatccatc gcagcgtaat ggtctacacc acgccgaaca cctgggtgga
     2461 cgatatcacc gtggtgacgc atgttgcgca agactgtaac cacgcgtctg ttgactggca
     2521 ggtggtagca aatggtgatg tcagcgttga actgcgtgat gcggatcagc aggtggttgc
     2581 aactggacaa ggtaccagcg ggactttgca agtggtgaat ccccacctct ggcaaccggg
     2641 tgaaggttat ctctatgaac tgtgcgtcac agccaaaagc cagacagagt gtgatatcta
     2701 cccgctgcgc gtcggcatcc ggtcagtggc agtgaaggac gaacagttcc tgattaacca
     2761 caaaccgttc tactttactg gctttggtcg tcatgaagat gcggatttgc gaggcaaagg
     2821 attcgataac gtgctgatgg tgcacgatca cgcattaatg gactggattg gggccaactc
     2881 ctaccgaacc tcgcattacc cttacgctga agagatgctc gagtgggcag atgaacatgg
     2941 catcgtggtg attgatgaaa ctgcagctgt cggctttaac ctctctttag gcattggttt
     3001 cgaagcgggc aacaagccga aagaactgta cagcgaagag gctgtcaacg gggaaactca
     3061 gcaggcgcac ttacaggcga ttaaagagct gatagcgcgt gacaaaaacc acccaagcgt
     3121 ggtgatgtgg agtattgcca acgaaccgga tacccgtccg caaggtgcac gagaatattt
     3181 cgcgccactg gcggaagcaa cgcgtaaact cgacccgacg cgtccgatca cctgcgtcaa
     3241 tgtaatgttc tgcgacgctc acaccgatac catcagcgat ctctttgatg tgctgtgcct
     3301 gaaccgttat tacggatggt atgtccaaag cggcgatttg gaaacggcag agaaggtact
     3361 ggaaaaagaa cttctagcct ggcaggagaa actgcatcag ccgattatca tcaccgaata
     3421 cggcgtggat acgttagccg ggctgcactc aatgtacacc gacatgtgga gtgaagagta
     3481 tcagtgtgca tggctggata tgtatcaccg cgtctttgat cgcgtcagcg ccgtcgtcgg
     3541 tgaacaggta tggaatttcg ccgattttgc gacctcgcaa ggcatattgc gcgttggcgg
     3601 taacaagaag gggatcttca cccgcgaccg caaaccgaag tcggcggctt ttctgctgca
     3661 aaaacgctgg actggcatga acttcggtga aaaaccgcag cagggaggca aacaatgaat
     3721 caacaactct cctggcgcac catcgtcggc tacagcctcg gtgacgtcgc caataacttc
     3781 gccttcgcaa tgggggcgct cttcctgttg agttactaca ccgacgtcgc tggcgtcggt
     3841 gccgctgcgg cgggcaccat gctgttattg gtgcgggtat tcgatgcctt cgccgacgtc
     3901 tttgccggac gagtggtgga cagtgtgaat acccgctggg gaaaattccg cccgttttta
     3961 ctcttcggta ctgcgccgtt aatgatcttc agcgtgctgg tattctgggt accgaccgac
     4021 tggagccata gcagcaaagt agtgtatgca tatttgacct acatgggcct cgggctttgc
     4081 tatagcctgg tgaatattcc ttatggttca cttgctaccg cgatgaccca acaaccacaa
     4141 tcccgcgccc gtctgggcgc ggctcgtggg attgccgctt cattgacctt tgtctgcctg
     4201 gcatttctga tagggccgag cattaagaac tccagcccgg aagagatggt gtcggtatac
     4261 catttctgga cgattgtgct ggcgattgcc ggaatggtgc tttacttcat ctgcttcaaa
     4321 tcgacgcgtg agaatgtggt acgtatcgtt gcgcagccgt cattgaagat cagtctgcaa
     4381 accctgaaac ggaatcgccc gctgtttatg ttgtgcatcg gtgcgctgtg tgtgctgatt
     4441 tcgacctttg cggtcagcgc ctcgtcgttg ttctacgagc gctatgtgtt aaatgatacc
     4501 gggctgttca ctgtgctggt actggtgcaa aacttggttg gtactgtggc atcggcaccg
     4561 ctggtgccgg ggatggtcgc gaggagcggt aaaaagaata ccttcctgat tggcgctttg
     4621 ctgggaacct gcggttatct gctattcttc tgggtttccg tctggtcact gccggtggcg
     4681 ttggttgcgt tggccatcgc ttcaattggt cagggcgtta ctatgactgt gatgtgggca
     4741 ctggaagctg ataccgtaga atacggtgaa tacctgaccg gcgtgcgaat tgaagggctc
     4801 acctattcac tattctcatt tacccgtaaa tgcggtcagg caatcggagg ttcaattcct
     4861 gcctttattt tgggattaag cggatatatc gccaatcagg tgcaaacgcc ggaagttatt
     4921 atgggcatcc gcacatcaat tgccttagta ccttgcggat ttatgctact ggcattcgtt
     4981 attatctggt tttatccgct cacggataaa aaattcaaag aaatcgtggt tgaaattgat
     5041 aatcgtaaaa aagtgcagca gcaattaatc agcgatatca ctaattaata ttcaataaaa
     5101 ataatcagaa catcaaaggt gcaactatga gaaaaatagt ggccatggcc gttatttgcc
     5161 tgacggctgc ctctggcctt acctctgctt atgcggcgca actggctgac gatgaagcgg
     5221 gactacgcat cagactgaaa aacgaattgc gcagggcgga taagcccagt gctggcgcgg
     5281 gaagagatat ttacgcatgg gtacagagag gattgttcga tttcaatagt ggttattatt
     5341 ccaatattat tggcgttgaa ggcggggcat attatgttta taaattaggt gctcgtgctg
     5401 atatgagtac ccggtggtat cttgatggtg ataaaagttt tggctttgcc ctgggggcag
     5461 taaaaataaa accctgtgaa aatagcctgc ttaaattagg tcgcttcggg acggattata
     5521 gttatggtag cttaccttat cgtattccgt taatggctgg cagttcgcaa cgtacattac
     5581 cgacagtttc tgaaggagca ttaggttatt gggctttaac accaaatatt gatctgtggg
     5641 gaatgtggcg ttcacgagta tttttatgga ctgattcaac aaccggtatt cgtgatgaag
     5701 gggtgtataa cagccagacg ggaaaatacg ataaacatcg cgcacgttct tttttagccg
     5761 ccagttggca tgatgatacc agtcgctatt ctctgggggc atcggtacag aaagatgttt
     5821 ccaatcagat acaaagtatt ctcgagaaaa gcataccgct cgacccgaat tatacgttga
     5881 aaggggaatt gctcggcttt tacgcgcagc tcgaaggttt aagtcgtaat accagccagc
     5941 ccaatgaaac ggcgttggtt agtggacaat tgacctggaa tgcgccgtgg ggaagcgtat
     6001 ttggcagtgg tggttatttg cggcatgcaa tgaatggtgc cgtggtggat accgacattg
     6061 gctatccctt ttcattaagt cttgatcgta accgtgaagg aatgcagtcc tggcaattgg
     6121 gcgtcaacta tcgtttaacg ccgcaattta cactgacatt tgcaccgatt gtgactcgcg
     6181 gctatgaatc cagtaaacga gatgtgcgga ttgaaggcac gggtatctta ggtggtatga
     6241 actatcgggt cagcgaaggg ccgttacaag ggatgaattt ctttcttgct gccgataaag
     6301 ggcgggaaaa gcgcgatggc agtacgctgg gcgatcgcct gaattactgg gatgtgaaaa
     6361 tgagtattca gtatgacttt atgctgaagt aagaaataac gccggagaga aaaacctccg
     6421 gcgtttcaga ttgttgacaa agtgcgcgtt ttttatgccg gatgcggcgt aaacgcctta
     6481 tccagcctac aaaaactcat aaattcaaag tattgcagga aaaggtaggc ctgataagcg
     6541 tagcgcatca ggcaatctct ggtttgtttt cagatgaaaa cgccgaagtg aaaattctcc
     6601 ggcgttttgg ccgtgaatta ctgctgcgga attgccggta cagccggaac gttaagagct
     6661 ggcatcgcaa acatgccaac aaaatcttct aacgacattt tctgcccatt taacgttatc
     6721 tgaccgttag tatattgcag gctggtggtg atggtattgt cctgcaaggt ggtcagacgg
     6781 aacatctgcc ccattgctga tgcaccttca acttgctgtt tcgccagttt tttcgcttga
     6841 tcttcctgat aaccttccag cttcgctacc tgagtcataa actcagttgc catatccacc
     6901 ggaatggtca gtttcgcatc cagagattta accgaacgat ctacttcctg cgccagcgtt
     6961 tgcggcgctt ctttagtcgt tgccggatct ttcaggaaca gcgacagatt cagcgcactt
     7021 tcaccctgac tgtttttcca gcttagcggc gcgacagtaa tcaccggatc gcctttcaac
     7081 atcagcggca gggcgctaaa gaaggcttcc gtcactttct cctgataaag ttcgggattg
     7141 ttggcaattt ctggctgtgc cagcagcgcc tgagtttgcg cgttatattg ctggctgaac
     7201 tgatgccagg cttcaccatc aatctggccg acttttaaag tcagcttgcc gctgcccaga
     7261 tcctgattct gtaccttcag gctgtttagc gagtaatcca gttggctatt gatcgtttta
     7321 ccgtcattga ccagatccga tttaccgctg atctccatgc cttccagcag tgccagttct
     7381 ttgccttcca ctgaaatggt cattttttcc agtgacagtt tttggtttcc tacgcgctca
     7441 ccaaaacttg ccagcgtgct ggaaccgtcg gttttcagat tattaaaggt caactgcact
     7501 ttctggttgt attcgttaac tgcgtctatc cgaccacttt gcgcctcccc ggaaagggag
     7561 atggctttgc cgtctctgtc agcatttaac tggaactcgc cgccgctaaa ggcgactttt
     7621 tcatcctttt gctcgtaatt cagtggcttg agcgaaatat cggaactgga atcaccgctg
     7681 taaccaatgc gcgagttaat ctcaaaaggc gtttcacctt ttgccatatc aaacagtggt
     7741 ttgcttactt cgttattaac cagcgtggtt tgaattgatg ccatcgacgg gatcaggttc
     7801 agttttttaa gctgggcaag cgggaaggga ccatgatcaa ccgattcgtt gaagatgacg
     7861 ctctgaccgc ttttaatcca cggattttct ttcccggcaa tgggtttcac caacagttgc
     7921 aactggctgc tgaatacgcc gcgatgatag ttttgataac tcacttccag gttggattca
     7981 ggagctgtca gttttagttg cgcgttcgcc tgcgcgacca tgtcttcgag atgggtttca
     8041 atcttcttgc ctgtatacca tgcgccgcct gtccagacta cgcctagcgc aacaatgacg
     8101 cctaccgcta ccagcgattt attcataatg attatccata aaatgaaatc aggcggactg
     8161 gccgcctgaa ggtgttataa gcctttaata agcttagcaa gagatgttaa ttttttcagt
     8221 aagctcttac agcttgttgt aaacacgcgc taaacggccg tggcctttga cagtcaccgg
     8281 tgattcgttg gcggcaataa acgctgattc acccggttta agctgtaact gctgagaacc
     8341 tttccacaac gttgcatcgc cttcgacgca gaacaaaatg gcggcactct gctggctaat
     8401 ggtggtttct ttatcactaa ggtcatgcag cgagaaggca aaatcatcca ctggaatcgg
     8461 gaagtccagt tctgcacctt gtttcaccgg ctgggtcaac aactggttag ccggtttggc
     8521 ttcgaatttc acattggcaa ccagttccgg aatatcaatg tacttaggcg tcagacccgc
     8581 acgcagcacg ttatcggagt tcgccatcac ttccagcgcc acgccttgca ggtaagcgtg
     8641 cggtgtttca gcgaacagga acatcgcttc gccaggattc aatttcacca cattcagtaa
     8701 cagcggggag aacaggccgc tgtcttccgg gtaaaattca gaaattaaac gaatcgtttg
     8761 ccacggttca ccctgctgac tgtcgagcgc cgattttaaa atcgccagcg cgcgggattt
     8821 ttcttcaccc tgcatattca acaggctggc gaacagttcg cttaaacgtt cggcattagg
     8881 ctgttgtaaa aagtgagcaa ttgccggatg tgcacctgcg actggctgga gtagggagac
     8941 aatctcggaa aactcacgaa acgcgttcat cgcaaggaaa ggcgtcagcg caaaaaccag
     9001 ctccggcttg tggttaggat ctttatagtt acgctcggcg gcatccatcg ggatacctgc
     9061 ggcattttct ttggcaaaac cgatttcaga attgcgtttg tttggatgaa cctgaatgga
     9121 gagcggctgt gctgcgcata atactttgaa caggaaaggc agttcgccaa agcgtttggc
     9181 aacggcctct ccgagcagag tcgatttatc actctcaatc acatcacgca gtgaaacgat
     9241 atctccggcg gcattctgca ctcgtgaact gcttttcgga tgtgcgccca tccacagctc
     9301 ggccatcggc tggctggacg gattttccat accataaagt tcagtcaacg ccgttttgct
     9361 gccccaggca tagttttgca ctgagttaat gagtttttgc atgatcaatc cctgttttaa
     9421 tgtggaaatt aatcccacta ttaaagcaag aatcctacgg gaagtaacct ggagccgcaa
     9481 aaagtcgtac tagtctcagt ttttgttaaa aaagtgtgta ggatattgtt actcgctttt
     9541 aacagggcaa cggaacaccc gcccagagca taaccaaacc aggcagtaag tgagagaaca
     9601 atgtcaaaca aaccctttca ttatcaggct ccttttccac tcaaaaaaga tgatactgag
     9661 tattacctgc taaccagcga acacgttagc gtatctgaat ttgaagggca ggagattttg
     9721 aaagtcgcac ccgaagcgtt aactctgttg gcgcgtcagg cgtttcatga tgcgtcattt
     9781 atgctgcgtc cggctcacca acaacaggtg gccgacattc tgcgtgaccc ggaagccagc
     9841 gaaaatgata aatatgtggc gctgcaattc ctgcgcaact ccgacatcgc ggcgaaaggt
     9901 gttctgccaa cctgtcagga taccggcact gcgattattg ttggtaaaaa agggcagcgt
     9961 gtatggaccg gtggctgtga tgaagcggcg ctggcgcgcg gtgtctataa cacttatatc
    10021 gaagataatt tgcgctactc gcaaaacgcg ccgctggata tgtataaaga ggtgaatacc
    10081 ggcaccaatc tgccagcgca gatcgatctt tatgccgttg atggcgacga gtacaaattc
    10141 ctctgtatcg ccaaaggtgg tggttcggca aacaagacgt atctctatca ggaaaccaaa
    10201 gcgttactaa cgccggggaa actgaaaaat tacctggttg agaagatgcg cacgctgggt
    10261 acggcggcct gtcctccgta tcatattgcg ttcgtaattg gtggaacttc tgcagaaact
    10321 aaccttaaaa cagtgaaact ggcttccgct aaatactatg acgaactgcc aacggaaggg
    10381 aatgagcacg gtcaggcatt ccgcgatgtg gaactggaaa aagaattgct gatcgaagcg
    10441 caaaatctcg gtctgggtgc gcagtttggt ggtaaatact tcgctcacga catacgcgtg
    10501 attcgcctgc cacgtcacgg cgcatcctgt ccggttggta tgggtgtttc ctgctctgct
    10561 gaccgtaata tcaaagcgaa gatcaaccgt caggggatct ggatcgaaaa actggaacat
    10621 aatccaggta aatatatccc tgaagagctg cgtaaagcgg gagaaggcga agcggtgcgc
    10681 gttgacctta accgtccgat gaaagagatc ctcgcacagt tgtcgcagta tcccgtttct
    10741 acacgcttat cgcttaacgg cacgattatc gtcggtcgtg atattgctca cgccaaactg
    10801 aaagagcgga tggataacgg tgaagggctg ccgcagtaca ttaaagatca tccgatttac
    10861 tacgcgggtc cggccaaaac gccggaaggt tatgcctccg gttctcttgg cccaacgacc
    10921 gccggacgga tggattctta tgtcgatcaa ctgcaagcgc agggcggaag tatgatcatg
    10981 ctggcgaaag gcaaccgcag ccagcaggtg acggatgcct gtaaaaaaca cggcggcttc
    11041 taccttggca gtatcggtgg tccggccgct gtattggcgc agggaagtat taagagcctg
    11101 gaatgtgttg aatatccgga actgggaatg gaagccatct ggaaaattga agtggaagat
    11161 ttcccggcgt ttatccttgt ggatgataaa ggaaatgact tcttccagca gatacaactc
    11221 acacagtgca ctcgctgtgt gaaataaaca gagccgccct tcgg
//
LOCUS       DADKRT010000141        11212 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.142, whole genome shotgun sequence.
ACCESSION   DADKRT010000141 DADKRT010000000
VERSION     DADKRT010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11212
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.142"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..868)
                     /locus_tag="JQ356_003135"
                     /pseudo
     CDS             complement(1..868)
                     /locus_tag="JQ356_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310631.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
     gene            complement(843..1643)
                     /gene="otsB"
                     /locus_tag="JQ356_003136"
                     /pseudo
     CDS             complement(843..1643)
                     /gene="otsB"
                     /locus_tag="JQ356_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416411.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
     gene            complement(1810..2799)
                     /locus_tag="JQ356_003137"
     CDS             complement(1810..2799)
                     /locus_tag="JQ356_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter permease AraH"
                     /protein_id="HAY4623147.1"
                     /translation="MMSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVP
                     NFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTES
                     LWIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIED
                     ESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPV
                     VRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGK
                     ISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
     gene            complement(2811..4325)
                     /locus_tag="JQ356_003138"
     CDS             complement(2811..4325)
                     /locus_tag="JQ356_003138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter ATP-binding protein
                     AraG"
                     /protein_id="HAY4623148.1"
                     /translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
                     GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
                     IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR
                     NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
                     GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPIS
                     LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
                     LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADQHIRSLNIKTPG
                     AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
                     AVLFASSDLPEVLGVADRIVVMREGAIAGELLHEQADERQALSLAMPKVSQAVA"
     gene            complement(4395..5383)
                     /locus_tag="JQ356_003139"
                     /pseudo
     CDS             complement(4395..5383)
                     /locus_tag="JQ356_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001397210.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter substrate-binding
                     protein"
     gene            6097..6600
                     /locus_tag="JQ356_003140"
     CDS             6097..6600
                     /locus_tag="JQ356_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HAY4623149.1"
                     /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
                     AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
                     QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
                     VVSHQLH"
     gene            complement(6679..6930)
                     /locus_tag="JQ356_003141"
     CDS             complement(6679..6930)
                     /locus_tag="JQ356_003141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2766 domain-containing protein"
                     /protein_id="HAY4623150.1"
                     /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
                     LKNIDFSNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
     gene            complement(7045..7131)
                     /gene="azuC"
                     /locus_tag="JQ356_003142"
     CDS             complement(7045..7131)
                     /gene="azuC"
                     /locus_tag="JQ356_003142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein AzuC"
                     /protein_id="HAY4623151.1"
                     /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR"
     gene            7394..7717
                     /locus_tag="JQ356_003143"
     CDS             7394..7717
                     /locus_tag="JQ356_003143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623152.1"
                     /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
                     HAHTDRYVSRGIADRACQQEGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
                     FPVFL"
     gene            7888..8385
                     /gene="ftnA"
                     /locus_tag="JQ356_003144"
     CDS             7888..8385
                     /gene="ftnA"
                     /locus_tag="JQ356_003144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HAY4623153.1"
                     /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
                     RHAQEEMTHMQHLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
                     ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(8423..8662)
                     /locus_tag="JQ356_003145"
     CDS             complement(8423..8662)
                     /locus_tag="JQ356_003145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HAY4623154.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
                     EGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH"
     gene            8853..10064
                     /gene="tyrP"
                     /locus_tag="JQ356_003146"
     CDS             8853..10064
                     /gene="tyrP"
                     /locus_tag="JQ356_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HAY4623155.1"
                     /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
                     LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNVRKLRRVF
                     ITGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
                     LIAAGLLPEVR"
     gene            complement(10126..10791)
                     /gene="yecA"
                     /locus_tag="JQ356_003147"
     CDS             complement(10126..10791)
                     /gene="yecA"
                     /locus_tag="JQ356_003147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YecA"
                     /protein_id="HAY4623156.1"
                     /translation="MKTGPLNESELEWLDDILTKYNTNHAILDVAELDDLLTAVLSSP
                     QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFG
                     LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS
                     PEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC
                     CLH"
     gene            complement(10987..11073)
                     /locus_tag="JQ356_003148"
     tRNA            complement(10987..11073)
                     /locus_tag="JQ356_003148"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11037..11039),aa:Leu,seq:taa)
     gene            complement(11086..11159)
                     /locus_tag="JQ356_003149"
     tRNA            complement(11086..11159)
                     /locus_tag="JQ356_003149"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11125..11127),aa:Cys,seq:gca)
BASE COUNT         2808 a         2847 c         2593 g         2964 t
ORIGIN      
        1 taacgaattt taccatgatg ctgcggatat ttttccagca acgcttcata ggcgagaaaa
       61 cgctctggca aacctttgga ataatccagc cgttcgacag aaaagatatt ttgtacgttt
      121 ttcagttccg ctttaagttg cgccagtttt ggcggcagtg gcccggcagc ctgtttggct
      181 atttctttcg gttcaatgcc gatcgggtag acttctgttc gaaatgcttt gccccaggct
      241 gtatggcttt ttgcgctacg tgtcgtgacg cgggtcaggt tagaaagaca atccaggaac
      301 gccagacgat cgttttctgt ctggaaaccc agcaaatcat aatcacaaag ctgttcaagc
      361 aaggtgtcat atgtcggcag cgcgttgaag atttccggtg tcgggaaagg aatatgcaga
      421 aagaaaccaa tgcgattatt caccccacgt ttgcgtaatt catgcgcaaa gggcaacagg
      481 tgataatcgt ggatccagat aatgtcatcg tcttgcaaca gcggcagtaa tttatctgcc
      541 agcaacgcat ttacgcgtag atagccgtcc caggcaggac gctgaaattg catcagatcg
      601 agccgataat gaaaagcggg ccagagaacg gcattggaga attggttgta gtattcgtca
      661 aggtcctgtt cgctgaggtt aaaagaggcc cacgtaatgt tacctttttt agcggctgat
      721 cctcattccc tgtttcacca ctccagccaa accacagtcc gcctgtggct ttcagtgccc
      781 ccagtatgcc aacggcaagg ccaccggcac tggcggcgtg ctcgtctggt ggtgcaatcc
      841 ggttagatac tacgactaaa cgactcatag tcatcactcc tgttattttc tcttttttgt
      901 tgtaatgcgg tggttatcat ttcaagcctg ctccagacat ccggcacacc cgccagtcgc
      961 catgatgcct gagttgcacc tgtgccaatt tttactgaca ttccgcccag tcggttaacg
     1021 actgcgaagc cagattcatc ggttaaatca tcgcccagaa atacgggcgt tcgcccgata
     1081 aagggagctt cctgcataaa agctgcaatt gcctcacctt tactggtacc tctcggtttg
     1141 atctcgacaa cacactttcc ctgctgtaac gccatttgtg gccagatctg agtaatacgt
     1201 tacgctaatg tcattaatgc gtcttcatgc tgcggagcct gacgataatg cagcgcaaaa
     1261 gccatccctt tcgcctccag ctccgcgccg ggatactgag cgataactgt atgcagttgc
     1321 acgctaatat cacgcgcaat cgcatccggc agatgaacga tatgcgtttt accattgatg
     1381 tcacggcgct ccgccccatg cacgcccgct aacgggaagc gataaggttt tgccagtgcg
     1441 tcaagctcca ccattgagcg ccctgatatc aatgccaatg caccatcact tgcggttgcc
     1501 agtagctgta gtccttgcag aatattgtca ggcacgacga cctgatcggg atgcggtttg
     1561 atttccgcca gcgttccatc gagatcaaaa aaccaggcat atttcgcgga tagttcaggg
     1621 gtttcggtta acggttctgt cacccggttc tcctacttct cttttcttat tgttttgcgc
     1681 agaacgcgct ttacagacat gtaagtatag acagtgtgac gggggtcgcc atttgcaacg
     1741 aagaacagcc aaccgttatg gcggttggct gtggtgggaa aaaacgctaa attgttgcag
     1801 aaaaaagcat cagacagtgc gtttcgcttt ttgcttgtaa cggtcgaaga tcaccgctgc
     1861 cagcaggatt aagccgcgaa ccacgtactg cgcgaaagga gaaatattaa gcaggttcat
     1921 ggcgttttcc acggtgccta aaattaagat acccgccacc acatatgaga tttttccgat
     1981 gcctcctttc agagaaacgc cacctaaaac acaggcggag ataacaatca gctcgtaacc
     2041 aatcgacgtc attggctgcc cactggtcat acgtgaagcc agaataattc cggctatcgc
     2101 agataccagg ccagagagaa caaagataat aattttggtg cgaacaaccg gtacacccgc
     2161 cagacgcgca gcctcttcgt tcccgccaat cgccagggtg ttacgaccaa aggtggtttt
     2221 attcagcaac aaaccaaaga taatcagaca cgcgacggtg agccagattg gcgcaggcag
     2281 accgaaccag ttagcgtaac caagggcaaa gaagctttca tcttcgatac cgaccgcttt
     2341 accgtctgaa atgatgtacg ccagacctcg aacaatctgc atcgttgcca gtgttgtgat
     2401 cagagcattt attttcagtt tggcgataac aaagccattg accaggccac agagaatgcc
     2461 aagcagcaac cccgctgcca cgccaatcca caggctttca gtcaggttga taaccaccgc
     2521 cgtggtgaca cccgcacagg caattacgga ggcgacagaa aggtcaaagt caccggaagc
     2581 aaggcagaac aacatgccac acgccaccat ccccgacatg gaaattgcca ggcccaaccc
     2641 tttcatatta atgaaggtgg caaaatttgg gacaaaaatg gcacaggcga taaagagcac
     2701 cgcaaacacc accagcatgc cgtactgatc ccagatacgc ccgaagctga atgacgactt
     2761 aggtgcgcca gaacccgatg tagaaacaga agacatcata ctctccttac tcaggcaact
     2821 gcctggctga ctttaggcat cgcaaggctc agtgcctgac gctcatctgc ctgctcgtgt
     2881 aacaattcac cggcgattgc accttcccgc atcaccacaa tccggtcggc aacgccgagg
     2941 acttcaggta agtcgctgga ggcaaacagc accgccacac cctgcgccgc cagcgcataa
     3001 attacgttat atatttcgtg cttagcacca acatcaatgc cgcgcgtagg ttcatccagc
     3061 aaaatgacct tcatctcttc cgataaccag cggcccagaa tggctttttg ctgatttccg
     3121 cctgagagat tcatgatcag ttgctcagcg cccggcgttt tgatgttgag cgaacgaatg
     3181 tgctgatcgg cattgttttc ttcccaaccg ttgttgatta cacaaccgcc gagcacatgt
     3241 ttgcgtctgg cactgatgtt gatattgtcg cgaacggagt gcacgggaat aatgccttcc
     3301 gctttgcgat cttccgggca gagcatcatg cctgcggcaa tggcgtggct cggtttacga
     3361 atatcgatcg gctgttggtc gatataaacc tgaccggcgg tgatttgcgt cccgccaaac
     3421 aagcctttca ttaattcgct acgccccgcc cctaccagac caaacagccc aacaatttca
     3481 ccactgcgaa ccgccagact tattggcgta cgcacgcctg gtgctttcac agcatcaaga
     3541 cgcaggcgct cctcgccata actacgaggt tgccagccgt agatatcgcc aatgtcgcgc
     3601 ccgaccatcg cctgcaccag cgcgtcgtgg tcaacctgct gcatatcggt aaaggttttg
     3661 acataacgtc catctttaaa gacagtgatg gcatcgctga gggcaaatat ttcttccata
     3721 cggtgagaaa cgtataagat cacccgcccc tcttttcgca gttcacgaat aacgcggaaa
     3781 agattgtcga tttcgcgggc agaaagggag ctggttggct catcaaaggc gataatttta
     3841 gcgttacgcg ccagcgcctt ggcgatttca accatctgcc actgaccaat ggagagatat
     3901 ttcagcggcg tgtccgggtc aatatccata ccaagatgtt taagttgtaa acccgcctca
     3961 taattcagca atgagcgatt cacaatgccg cctttatgcg gcagctggcc gagatagatg
     4021 ttttccgcga cggtcatttc cggcacgaga tgcagttcct ggtaaataat cgccacaccc
     4081 gcgttaagtg ctgcggtcgt gtcggaaaag gacatttcct gcccattaat cactacagaa
     4141 cccgtggttg gcgcatagtt gccgctgagg atttttaaga gagttgattt tcctgcgcca
     4201 ttttcaccca tcaacgcatg aacctgaccg gcatagcagt caaaactaat atccgtcagc
     4261 gccttaacgc cgggaaacgt tttaccgatg ccgcgaaatg agagatacgg ggtagactgt
     4321 tgcataacgt ctccgtgaat cactggtcgt tcacaccccc tctgcatcat gcagagggga
     4381 atttttccgg caaattactt accgcctaaa ccttttttct ccagttcttc tttaaagttg
     4441 tcacgcgtga tcagcaccac gtcggtaact tcggtaaatt ttggcggttc aacgtctttt
     4501 gctacccagt tgtaaagcat ttcgctggat ttatagccat gtacgtccgg gcttggcagc
     4561 agggaaccgt agaagccggt tgcctgtact ttagacagtt cgctcaccgc atccacaccg
     4621 ttaatgccaa tgccgataat atcggcagct ttaaagccct gaccttccgt cgcgcgtacg
     4681 ccgcccagca cggtgctgtc gttcataccg acgatcagcc aatgtttaac ttcaggatgt
     4741 tgaaccagca ttgagttggc agcgtcaaat gcccccggga tgtcgttaga tttggtaggt
     4801 acctgataaa tttgtttttc cgggaatccg gccgctttca gcgcatccat agatcccgta
     4861 gtacggcggc gggcagtatc cagttcgttg gcggtaatca ccatcaccgc gctttctttg
     4921 acatcccagc cacgtttctg catctcttta tacagttcct gaccctgacg ttcgccaatt
     4981 ttagtcgcgc catcatcacc agcggaacgg tatccattgg cttacctttg gcgttaacaa
     5041 actgatcatc cacggcaatg actttcatat cgtagccacg cgctttcgcg acgatggcag
     5101 agccgagttt ggggtccgga gtacaaataa cgaaaccttt tgcgccactg gcagccaggc
     5161 tgtcgatcgc gttcaatgtt ttttcgccat ccggcacggc aatcttaata acctcaaacc
     5221 ctaaatcctt cccggcttta tcggcaaact tccattcggt ctggaaccac ggctcttccg
     5281 gttgcttcac cagaaaaccg agcttcaggt tctccgccat agcggattgt gacataacgg
     5341 ctgccagacc aatggctgcc agggctttag taaatttgtg catggttctc tccagcttta
     5401 gtgtcgtttt gtgtagggca aaaacgaatg acattcgtta aattaatcgg aaaacaaagc
     5461 attacctttt aactaaaaga taagtgaccg tgttgacata gttttagcga gaaattaatt
     5521 ctccatagga gagcaatatc acatcgcaga attacagtga gaacgtgcat aaatttagcg
     5581 ggaaaagaca taagggaaag ccaatttgtc agacaaattg tcgaatgcac agcagattaa
     5641 tccataagat tagcttggaa atccttgttg tctttggtac ccatgcggga tgtcttcttt
     5701 ttaaccagtc aataggccgc attacctggc gttgagtttt tgaaatggtg taataaccgc
     5761 aactcaaaga tgtggaaaat gcacgtcatt catttcgcca ttaattatca ctgtgctcat
     5821 taattaacag aacacgtata atgagagcca tctcgcaaaa atgaaaaaac gttttataaa
     5881 atcatcattt catcaatgaa atgtaaaaat atataaactt gatgatttaa gcattttctt
     5941 atacccgttc agacgttatt cttatttcag atcatcgtca gaattgactc cacgatcaca
     6001 tttcggaccg gcagaaagga attattctgc aaacagtaat tatggtgttt tgatttatct
     6061 tgcacctctc cacttctgga tataaggata ttaggtatgg caaccgctgg aatgcttctc
     6121 aaactcaact ctcaaatgaa ccgcgagttt tacgcatcca atctctacct tcacctgagt
     6181 aactggtgtt ctgaacagag tctgaacggc accgccactt tccttcgcgc ccaggcacag
     6241 agtaatgtga cccaaatgat gcgcatgttt aactttatga agagtgtcgg cgctaccccc
     6301 atcgttaaag ccattgatgt tcccggtgaa aaactgaact ctctggaaga actgttccaa
     6361 aaaacgatgg aagaatacga gcaacgttct agtacgttgg cacagttagc cgatgaagcg
     6421 aaagaactga atgatgattc aaccgtcaat ttcctgcgcg atctggaaaa agaacagcag
     6481 catgatggtc tgttgctgca aaccattctt gatgaagtgc gcagtgcgaa acttgctggt
     6541 atgtgcccag tgcagaccga ccaacatgtt ctgaatgtcg tgtcgcatca gctgcattga
     6601 tcatacatcg gcgctaatgc attgcgccga tgaagttttt gagaaaccgc tgcctcatct
     6661 ttttgaagca gcggtttttt aatgggattc gccttgtggg gtaaacttga gttcaatcag
     6721 cgcgatggct ttttggattg cccgcatggt gaccgggtct gcggcggcgg gatggttact
     6781 aaagtcgata ttcttcagct gactggacat tttttcacga acttcaacgg gcgcgattac
     6841 atcgagaaca tccagaattt gtttgataac caactggcaa gcaaccacat cagaaaccag
     6901 ttcctgatcg gcattcagcg gctgggacat cgtaaactcc tgatagcatt ttgaaaaccg
     6961 ttatagtagc ggcttcacat cttcagcgat agtcacatcc accgtcatca ggacacaaaa
     7021 aaacctgccg gagcaggttt tttgttatcg gaacatattg cctggcggta cgtctttgaa
     7081 cgtcttgcaa tagttattga acatactttt caggattttg cgcagtttca tcgcggcact
     7141 ccgaccattt gttatacatg tgttattttc tttgtgctta taatatgaca accatcacaa
     7201 aaatcaatct ttatgtgatg caaatcacac aaataccccc ttaatgttat aaaaatgata
     7261 atcaaaaaac agccccccca tttctgacac ctacagatgg caagaaatag cgcctgccag
     7321 gcgtcttttc cggtcattgt cgcagcgctg taacgcgtaa aatagtgctt tcttttactc
     7381 ttctggctgg accatgagac ttctgattct gactctttca ttaataacgc tggcggggtg
     7441 tacggttact cgccaggccc atgtgagcga agttgacgcg gcaacaggta ttgtacggtt
     7501 ggtttatgac caggcttttt tgcagcatgc ccataccgat cgttatgtca gtcgcgggat
     7561 cgccgatcgc gcatgccagc aggaaggcta tacccacgca atcccctttg gtcagccagt
     7621 aggcaactgt agcctttttg cgggttcctt atgtttgaat acggaattca ctttgtcata
     7681 tcagtgccat cattccgcct tccctgtctt tctctaaata ttttaatcag cgaggggatc
     7741 ttcgctgatt aaaaaaatag cggtaatgcg ttttattacc attcgtattt ttaataattg
     7801 aagtttatat tttacctttt gcaaataata aaataacaaa ttatagtgac gccacagcaa
     7861 caaatataac ctttgtggag cactatcatg ctgaaaccag aaatgattga aaaacttaat
     7921 gagcagatga acctggaact gtactcttca ctgctttatc agcaaatgag cgcctggtgc
     7981 agctatcata ccttcgaagg tgctgccgcg ttcctgcgcc gtcacgccca agaagagatg
     8041 acgcatatgc agcatctgtt tgattacctg actgataccg gcaatttacc gcgtattaat
     8101 accgttgaat ctccgtttgc tgaatattcc tcacttgatg aattattcca ggaaacctat
     8161 aaacacgaac aattaatcac ccagaaaatt aacgaactgg ctcatgctgc aatgaccaat
     8221 caggactacc caacatttaa tttcctgcaa tggtatgttt ctgagcagca tgaagaagag
     8281 aaactgttca aatcgattat tgataaatta agcctggcag gcaaaagcgg cgaaggtctg
     8341 tattttatcg acaaagaact ctctaccctc gacacacaaa actaatactc tccggcggca
     8401 ggtttactgc cgccgtttca aatcagtgac ggcaaatctt actctgatcg gtcgaaaaac
     8461 cgtctttcga aggtataaat ttgccttttg ctgccagaaa cgctaccagc tctcccgctg
     8521 tcatcccttc tgccgagcag gtgtgaaaac gtgcctgttc accaaaacgc gctttaattg
     8581 ctgcttccag actggcatgc gtatattgct cgcctgattc aatcatcata tttaacactt
     8641 catgaccgtg aatagagtcc atcgttcctc ctcaaaaaaa gcctagcgta gcgattgccg
     8701 cttatgaaga ctttgcgcca gagcagaact gaatgctttt tattgtacat ttatatttac
     8761 accatatgta acgtcggttt gacgaagcag ccgttatgcc ttaacctgcg ccgcagatat
     8821 cactcataaa gatcgtcagg acagaagaaa gcgtgaaaaa cagaactctg ggaagtgttt
     8881 ttatcgtggc gggaaccaca attggcgcag gcatgctggc aatgccgctg gctgcggcag
     8941 gtgttggttt tagcgtcacg ttaatcttgt tgattgggct ttgggcgttg atgtgctaca
     9001 cggcgctatt actgctggag gtgtaccagc atgttccggc agataccggt ctgggcacgc
     9061 tggcaaaacg ctatctggga cgctacggtc aatggctgac gggcttcagt atgatgttct
     9121 taatgtatgc tctgactgcg gcatacatca gcggtgccgg tgaattgttg gcctccagca
     9181 tcagcgactg gacaggtatt tcaatgtcgg caaccgctgg cgtgctgttg ttcacttttg
     9241 ttgccggtgg cgtggtttgt gttggaacat cgctggtcga tttatttaac cgttttctgt
     9301 tcagcgccaa aattattttt ctggtggtga tgctggtatt gctgctaccg catattcaca
     9361 aagtgaatct tttaaccctg ccgttgcaac aggggctggc tctgtcagca atcccggtga
     9421 tttttacctc atttggtttt cacggtagcg tgccgagtat tgtcagctat atggatggca
     9481 acgttcgtaa gctacgcagg gtgtttataa ccggtagtgc gatccccctg gtggcatata
     9541 ttttctggca ggtggcaacg cttggcagca ttgattcaac aacctttatg ggattgctgg
     9601 ctaatcatgc tggattaaac gggctgttac aggcgttacg cgaaatggtg gcctctccgc
     9661 atgttgagct ggcagtgcat ttatttgctg atttagccct cgccacgtca tttctcggcg
     9721 ttgcgttagg cttatttgat tatctggctg atttatttca gcgttcaaat accgttggtg
     9781 gacggttgca aactggtgca attacctttc tgccgccgtt ggcgtttgca ctgttttatc
     9841 cacgaggatt tgtgatggcg ctgggttacg ccggtgtggc gctggcggta ctggcattga
     9901 ttatcccttc gctgttgacc tggcaaagca gaaagcacaa tcctcaggcg ggttaccggg
     9961 tcaaaggtgg tcgtccggcg ctggtggtgg tgtttctctg tggtattgct gtgattggcg
    10021 tgcaattttt gattgcggca gggttgttac cagaagtgag gtgatcagat agcctcaaat
    10081 tccttattgg gtgccagaat taacgctgac acccaatttg gcctcttaat gcaggcagca
    10141 ctgcttaaat ttcttaccac taccgcacgg gcaaggatcg ttacgccccg gtttctcttc
    10201 tgctttgatc ggttgctgaa cagctttttc ctgcggatgc gccatccagt acgcatgtag
    10261 atcaagcgcc gccagtcgaa tggcatctac gctctcttca aacgcttctg gcgacatctt
    10321 ttctacccgc tcgaagtttt cctcagtacc gtgcagcgca atcgcctcca gcgctggttt
    10381 taacgaatcg ggcaacgttg accagtcaga aagtgccacg ccccgcatat agccaaagca
    10441 ccactcctca acaatcgtca gctcgctgcc atcaacttct cgcaagccga ataacggctc
    10501 aaactgctcc gggaattcgt tcagacgctc tgcggtatcg gccatatgtt gaaaagccag
    10561 gttcataaag cgcgtcatct ctttctctga cgcccagcgc ggcacatagt cagccccacc
    10621 ccacacggca accagccact gttccggttc aatctcttgc ggagaactca acaccgccgt
    10681 caataaatcg tccagctccg ccacatcaag gatggcgtgg ttagtgttgt atttggtcag
    10741 aatatcgtcc agccattcca actcactttc gtttaacggt cccgttttca tacgcttttc
    10801 cttgtggatc tcaactcgcc agcacctatc ttacatgccg gtccgtatca gagatacttt
    10861 ttgagtggct ttgccggtga ttaaaaatta aggagggtgt aacgacaagt tgcaggcaca
    10921 aaaaaaccac ccgaaggtgg tttcacgaca ctgcttattg ctttgatttt attcttatct
    10981 ttcccatggt acccggagcg ggacttgaac ccgcacagcg cgaacgccga gggattttaa
    11041 atcccttgtg tctaccgatt ccaccatccg ggctcgggaa gaaagtggag gcgcgttccg
    11101 gagtcgaacc ggactagacg gatttgcaat ccgctacata accgctttgt taacgcgcca
    11161 aattcttcag gcctttcagc cagacatccg cttgacgccg atgtctttta aa
//
LOCUS       DADKRT010000142        11137 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.144, whole genome shotgun sequence.
ACCESSION   DADKRT010000142 DADKRT010000000
VERSION     DADKRT010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11137)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11137)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11137
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.144"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            257..2962
                     /gene="malT"
                     /locus_tag="JQ356_003150"
     CDS             257..2962
                     /gene="malT"
                     /locus_tag="JQ356_003150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HAY4623157.1"
                     /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYG
                     KTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIATVQQATNGHCAICETMAQKRQY
                     ASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSR
                     NLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGW
                     ATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAI
                     LRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQW
                     ELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSL
                     LEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREGTMHAE
                     FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSL
                     ALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL
                     PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD
                     LDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA
                     NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQ
                     AGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRI
                     LREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQI
                     AGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYGV"
     gene            complement(3005..4021)
                     /gene="rtcA"
                     /locus_tag="JQ356_003151"
     CDS             complement(3005..4021)
                     /gene="rtcA"
                     /locus_tag="JQ356_003151"
                     /EC_number="6.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HAY4623158.1"
                     /translation="MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAK
                     PGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGAVRGGEYRFAIGSAGSCTLVL
                     QTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFY
                     PAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSL
                     HEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLAS
                     PAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFGLIETDGVTR
                     VSIE"
     gene            complement(4025..5251)
                     /locus_tag="JQ356_003152"
     CDS             complement(4025..5251)
                     /locus_tag="JQ356_003152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HAY4623159.1"
                     /translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
                     VMPDVHLGKDSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQA
                     IETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
                     GTLGTGNHFIKICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRD
                     LAYFMEGTEYFDDYLKAVAWAQLFASLNRDVMMENVVTALQSITQKTVRQPQTLAMEE
                     INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
                     CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMTAQSD
                     LVEVIYTLRQVVCVKG"
     gene            5440..7038
                     /locus_tag="JQ356_003153"
     CDS             5440..7038
                     /locus_tag="JQ356_003153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-dependent transcriptional regulator"
                     /protein_id="HAY4623160.1"
                     /translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWHPTLCLCQQESLVIDRL
                     ELLHDARSCSLFETLKRDIASVSPETEVVSIEIELHNPWDFEEVYACLHDFARGYKFQ
                     PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQTSPPRKKEQPRGAGEVTIIDLD
                     LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
                     AGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
                     LLRSANGGMLFFDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
                     RQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTE
                     ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
                     RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDA
                     DRLRKYLARFGLTWEAVQDQHSSS"
     gene            complement(7020..7778)
                     /locus_tag="JQ356_003154"
     CDS             complement(7020..7778)
                     /locus_tag="JQ356_003154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HAY4623161.1"
                     /translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
                     EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
                     PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
                     SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
     gene            complement(7795..8625)
                     /gene="glpG"
                     /locus_tag="JQ356_003155"
     CDS             complement(7795..8625)
                     /gene="glpG"
                     /locus_tag="JQ356_003155"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HAY4623162.1"
                     /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQ
                     AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMI
                     ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALIWIIAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
                     "
     gene            complement(8670..8996)
                     /gene="glpE"
                     /locus_tag="JQ356_003156"
     CDS             complement(8670..8996)
                     /gene="glpE"
                     /locus_tag="JQ356_003156"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HAY4623163.1"
                     /translation="MDLFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
                     NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
                     EVAYGA"
     gene            9186..10691
                     /gene="glpD"
                     /locus_tag="JQ356_003157"
     CDS             9186..10691
                     /gene="glpD"
                     /locus_tag="JQ356_003157"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HAY4623164.1"
                     /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGM
                     HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
                     GDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAE
                     LKYLVDHEWVRRTDDALWRRTKQGMWLNADQQSRVSQWLVEYTQQKLSLAS"
     gene            complement(10743..>11137)
                     /locus_tag="JQ356_003158"
     CDS             complement(10743..>11137)
                     /locus_tag="JQ356_003158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623165.1"
                     /translation="VMAGIGWQFSRRTPPELKNRLHCWLVFSPVYFWLILSNFILYIS
                     PEKSALLENIRNFFLTFVWPPLNFSPFWPQPWTDFVGPISAQLGFALGYYCHWCRKNR
                     NQRKKWGDWVTCLSLAILAQGPLFNYLQ"
BASE COUNT         2701 a         3038 c         2847 g         2551 t
ORIGIN      
        1 tttcatcagg aatgaagaag aaacccttgc ttaaatgaat ctgatgaaca taagggaaac
       61 cagtattcac gctggatcag cgtcgtttta ggtgagttgt taataaagat ttggaattgt
      121 gacacagtgc aaattcagac acataaaaaa acgtcatcgc ttgcattaga aaggtttctg
      181 gccgacctta taaccattaa ttacgaagcg caaaaaaaat aatatttcct cattttccac
      241 agtgaagtga ttaactatgc tgattccgtc aaaactaagt cgtccggttc gactcgacca
      301 taccgtggtt cgtgagcgcc tgctggctaa actttccggc gcgaacaact tccggctggc
      361 gctgatcacg agtcctgcgg gctacggaaa gaccaccctc atttcccagt gggcggcagg
      421 caaaaacgat atcggctggt actcgctgga tgaaggtgat aaccagcaag agcgtttcgc
      481 cagctatctc attgccaccg tgcagcaggc aaccaacggt cactgtgcga tatgtgagac
      541 gatggcgcaa aaacggcaat atgccagcct gacgtcactc ttcgcccagc ttttcattga
      601 gctggcggaa tggcatagcc cactttatct ggtcatcgat gactatcatc tgatcactaa
      661 tccagtgatc cacgagtcaa tgcgcttctt tattcgccat caaccagaaa atctcaccct
      721 ggtggtgttg tcacgcaacc ttccgcaact gggcattgcc aatctgcgtg ttcgtgacca
      781 actgctggaa attggcagtc agcaactggc atttacccat caggaagcga agcagttttt
      841 tgattgccgt ctgtcatcgc cgattgaagc cgcagaaagc agtcggattt gcgatgacgt
      901 ttccggttgg gcgacggcac tacagctaat cgccctctcc gcccggcaga atacccactc
      961 agcccataag tcggcacgcc gcctggcggg aatcaatgcc agccatcttt cggattatct
     1021 ggtcgatgag gttttggata acgtcgatct cgcaacgcgc cattttctgt tgaaaagcgc
     1081 cattttgcgc tcaatgaacg atgcgctcat cacccgtgtg accggcgaag aaaacgggca
     1141 aatgcgtctc gaagagattg agcgtcaggg gctgttttta cagcggatgg atgataccgg
     1201 cgagtggttc tgctatcacc cgctgtttgg caacttcctg cgccagcgct gccagtggga
     1261 actggcggcg gagctgccgg aaatccaccg tgccgccgca gaaagctgga tggcccaggg
     1321 atttcccagc gaagcgattc atcatgcgct ggcggcaggc gatgcgctga tgctgcgcga
     1381 tattctgctt aatcacgcct ggagtttgtt caaccatagc gaactgtcgc tgctggaaga
     1441 gtcgcttaag gccctgccgt gggacagttt gctggaaaat ccgcagttag tgttattgca
     1501 ggcgtggcta atgcaaagcc aacatcgcta tggcgaagtt aacaccctgc tagcccgtgc
     1561 tgaacatgaa atcaaggaca tcagagaagg caccatgcac gcagaattta acgctctgcg
     1621 cgcccaggtg gcgattaacg atggtaatcc ggatgaagcg gaacggctgg caaaactggc
     1681 actggaagag ctgccaccgg gctggttcta tagccgcatt gtggcaacct cggtgctggg
     1741 tgaagtgctg cactgcaaag gcgaattgac ccgctcactg gcgctaatgc agcaaaccga
     1801 acagatggca cgccagcacg acgtctggca ctacgcctta tggagtttaa tccagcaaag
     1861 tgaaattctg tttgcccaag ggttcctgca aaccgcgtgg gaaacacagg aaaaagcgtt
     1921 ccagctgatc aacgagcagc atctggaaca gctgccgatg catgagtttc tggtgcgcat
     1981 ccgagcacaa ctgttatggg cctgggcacg gctggatgaa gccgaagcgt cggcgcgtag
     2041 cgggattgaa gtcttgtcgt cttatcagcc acagcaacag cttcagtgcc tggcaatgtt
     2101 gattcaatgc tcgctggccc gtggtgattt agataacgcc cgtagccagc tgaaccgtct
     2161 ggaaaacctg ctggggaatg gcaaatatca cagcgactgg atctctaacg ccaacaaagt
     2221 ccgggtgatt tactggcaaa tgaccggcga taaagccgcc gctgccaact ggttgcgtca
     2281 tacggctaaa ccggagtttg cgaacaacca cttcctgcaa ggtcaatggc gcaacattgc
     2341 ccgcgcacaa atcttgctgg gcgagtttga acctgcggaa attgttctcg aagaactcaa
     2401 tgaaaatgcc cgcagtctgc ggttgatgag cgatctcaac cgtaacctgt tgctgcttaa
     2461 tcaactgtac tggcaggccg gacgtaaaag tgacgcccag cgcgtgttgc tggacgcatt
     2521 aaaactggcg aatcgcaccg gatttatcag tcattttgtc atcgaaggcg aagcgatggc
     2581 gcaacaactg cgccagctga ttcaactcaa tacgctgccg gaactggaac agcatcgcgc
     2641 gcagcgtatt ctgcgagaaa tcaatcaaca tcatcggcat aaattcgccc atttcgatga
     2701 gaatttcgtt gaacgtctgc taaatcatcc ggaagtgcca gaactgatcc gcaccagccc
     2761 gttgacccaa cgtgaatggc aggtcctggg gctgatctac tccggttaca gcaatgagca
     2821 aattgcgggc gagctggaag tggcggcaac caccatcaag acgcatatcc gcaatctgta
     2881 ccaaaaactc ggcgtcgccc accgtcaggc cgcggtacaa cacgcgcaga aactgctgaa
     2941 gatgatggga tatggggtgt gagtttagcc ggataatgca ttggatccgg tttacatctt
     3001 tacatcattc aatactcacc cgcgttacgc catctgtttc tatcaaacca aaccgcaccg
     3061 gcaagaaacg ctccaccacg gcgatattgg tcagcagatg gcatgaagga tgggcgaccg
     3121 taaattctcc cgcgcccgcc agcgccatcg gtagcaccag ctggtcggcg agatattccc
     3181 ccactgccgc cgggcttgcc aggtagcgtt tcacctcttt cactaactgc gcggctacca
     3241 cctcggcact gacgcgcttt tcaccgacga cgaaaaagcg ttcagtgata ttttcacttt
     3301 cgacttccag cgagacggta ttacccggcc cctgatcgcg cggcaggtta tgaatattct
     3361 gttcatgcag ggaaaaactc cccgccagtg tagcgatttc acgctcagca acatggcgcg
     3421 gcacaccagc taatagaact tctccacgca tctgcacaat gttcccgcgc tcgccaagtt
     3481 gcaaggtgtt aaacgatgcc acgggcgaga cttccgttgc caccacgccg cctccggcag
     3541 gataaaaacc gtgacgtaac agcgtggttt gctgatgaat tcctattttc gccagcagcg
     3601 gctccagcac ccggcggata aaatccgcag gcggcgccga cgggttatcg gtgcctccgc
     3661 tcacttcaac acgcgaaggt ccatcggcaa accacagcgc gggcagcacc gtttgcagca
     3721 ccagcgtaca gcttccggca ctaccgatag caaagcggta ctcgccgccg cgcacggcgc
     3781 caggccggaa gaccagacgc tgcgacccca gctccgcgcc ttccaccgtt gccctacaaa
     3841 tttccgcagc cgcttttacc gcggtcagat gctggcgcaa cagccccggt ttcgcccgcc
     3901 cggcacgaat gctggtgatg gtaaatggct ggccggttat catcgacagg ctcagcgccg
     3961 agcgcagaat ctgcccgcca ccttcgccct gtgcgccatc cagcgcaatc atccttttca
     4021 tcatttatcc ttttacgcac accacctgac gcagggtata gataacttcc accagatcgc
     4081 tttgtgccgt catcaccgca tcaatatctt tatacgccat cgggatttcg tcgatcactt
     4141 cggcatcttt acggcattcc acatgcgcgg tggcacgaat ttgatcttcc acgctgaaca
     4201 gttttttcgc tttagttcgg ctcattaccc gcccggcacc gtggctgcac gaacagaacg
     4261 actcttcatt tcccagccca cggacgataa agctttttgc tcccatcgaa ccgggaataa
     4321 ttccatattg accagcacgc gcagacaccg cgcctttacg cgtcacgtag atctcttcac
     4381 caaagtgctg ttctttttgc acatagttgt ggtgacagtt gatctcttcc atcgccagcg
     4441 tttgtggctg tctgaccgtt ttctgcgtaa tgctctgcaa tgccgttacc acgttttcca
     4501 tcatcacatc gcggttaagg ctggcaaaaa gctgcgccca ggccacggct ttcaggtaat
     4561 catcaaagta ttccgtacct tccataaagt acgccagatc acgcgacggc aacgtctcaa
     4621 gcgtttcctg catctctttt tgtgccagat cgataaagta agtcccgatg gcgttaccaa
     4681 ttccgcgtga accggagtgc agcataatcc acacctggtc cgactcatca aggcagattt
     4741 taataaagtg gttaccggtt cccagcgttc ccaggtgttt atagttattg gtattcagga
     4801 aacggggata tttttgcgtt aaccactgat aaccggcttc aagctcagcc catttcgcat
     4861 cgacgttgac aggcgggttt tcccatgcgc ctttatcacg tttacaacgc ccggtagtac
     4921 gcccgtgcgg cacggccgtt tcaatcgcct gacgcagctc tgccaggttt tcaggcaggt
     4981 cttccgccgt taacgcggta cgcagcgcgt tcattccaca gccaatatcc acgcccaccg
     5041 ccgccggaat aatcgcccct ttggtcggga tcacgctacc aatggtggaa tctttaccca
     5101 ggtgtacatc aggcattacc gcaatatgtt tgaaaataaa cggcatcttc gccgtattaa
     5161 taagttgctg acgcgcatcg gcttctaccg gcacgccttt ggtccacatt tttaccgggg
     5221 cattttcagt ggtcagtaat tcgtaattca ttttgttttt ctcttttcgt tgtttgctgt
     5281 cctgataatt gcaaccgtcg tgccagaaaa ttaaataagt aaattaattt tttaattcat
     5341 tgtttttaaa aagattatat ctttatgtcc gtaaccggag atttcccgca aagccgattt
     5401 accgataatg aaatatcgtc ttttataagg atatctaaga tgcgtaaaac agtagctttt
     5461 ggctttgtcg gaacggtgct ggattatgcc gggcgcggca gtcagcgctg gtcaaaatgg
     5521 catccgacac tctgtttatg ccagcaagaa tcgttggtca tcgatcgact ggaattattg
     5581 catgacgccc gctcgtgctc gctatttgaa acgcttaaac gcgatatcgc cagcgtttcg
     5641 ccagaaacag aagtggtgag cattgagatt gaactgcata acccgtggga tttcgaagag
     5701 gtttacgcct gcctgcatga tttcgcccgt ggttacaagt ttcagccaga aaaagaagac
     5761 tatttaattc acatcaccac cggcacccac gtcgcgcaga tttgctggtt tctgctggcg
     5821 gaagcgcgtt atctacccgc ccggttgata caaacttcac caccgcgcaa aaaagaacaa
     5881 ccgcgcggtg ccggtgaagt gacgattatc gatctcgatc taagccgtta taacgccatc
     5941 gccagccgct ttgccgagga acgccagcaa acgcttgatt ttcttaagtc cggcattgcc
     6001 acgcgtaacc cccacttcaa ccgcatgatt gagcagattg aaaaagtggc gattaaatcc
     6061 cgcgcaccga tcctgcttaa cggcccaacc ggtgcgggaa agtcatttct ggcgcgacgt
     6121 atatttgaat taaaacaggc gcggcatcag tttagcggcg cgtttgtgga agtgaactgc
     6181 gccaccctgc gcggcgatac cgccatgtcg acgctgtttg gtcatgtgaa aggcgcgttt
     6241 accggggcgc gggaatctcg tgaaggttta ttacgcagcg ccaacggcgg aatgttgttt
     6301 tttgatgaga ttggcgaact gggcgcagac gaacaggcaa tgctgctaaa agccattgaa
     6361 gagaaaacct tttacccgtt tggcagcgat cgccaggtga gcagtgattt tcagcttatc
     6421 gccggaacgg tgcgcgattt gcgccagctg gttgccgaag gcaaatttcg cgaagatctg
     6481 tacgcgcgga tcaatctctg gaccttcacc ctgccgggtc tacgccagcg ccaggaagat
     6541 attgaaccga accttgatta tgaagtggag cgccacgcca cactcactgg cgacagcgtg
     6601 cgttttaaca ccgaagcgcg gcgcgcctgg ttggcttttg cgacctctcc ccaggcaaca
     6661 tggcgcggta actttcgcga actttctgcc agcgtcacgc ggatggccac ctttgccact
     6721 agcggacgca tcactctgga cgtggttgaa gatgagataa accgtctgcg ctataactgg
     6781 caggagagcc gcccctccgc gcttacggcg ttgctgggcg cagaggcaga aaacatcgat
     6841 ctcttcgacc gtatgcaact ggaacacgtt atcgctatct gccgccaggc aaagtcgctt
     6901 tctgcagccg gacgacagct ttttgatgtt tcgcgccagg gaaaagccag cgtcaatgac
     6961 gcggatcggc tacgcaaata cctggcgcgt tttggtctga cgtgggaagc cgtgcaggat
     7021 cagcacagct ccagttgaat atgatggtcc gtcagcacct gcattacgct tactggcggc
     7081 ggggcgtcgg tgtagacggc atctaccatg ctgatgctgc ccatattgac catcgcgtta
     7141 cggccaaatt tcgagtgatc gacaaccagc ataacgtggc gcgagttctc aataatggcg
     7201 cgcttggtgc gaacttcgtg gtaatcgaac tccagcagcg agccgtcgct atcgatgccg
     7261 cttatcccca gaatgccgaa atcaaggcgg aactgggaga taaaatcgag cgtcgcttcg
     7321 ccaatgatcc cgccatcgcg gctgcgtaat tcgccaccag cgagaataat gcggaaatct
     7381 tcttttacca tcaacgtgtt agcaacattg agattgttgg tgacaatacg caaattgctg
     7441 tgattaagca gcgcgtgcgc caccgcttcc ggcgtggtgc cgatatcgat aaacagtgtc
     7501 gagccgttgg ggatttgctc cgccactttg cgggcaatcc tctctttttc ttcggtctgg
     7561 gtggctttgc gatcgtgcca cggcgtgtta accgaactgg aaggcagcgc cgcaccgcca
     7621 tggtgacgca ggatcaggtt ttgctccgcc agctcattga ggtcgcggcg aatagtctgc
     7681 gggctgacgg agaaatgctc taccagctct tcagtactga cataaccctg ctgtttaacc
     7741 agttcgataa taccgttgtg acgttgtgtt tgtttcattt ataaatccct ggaattattt
     7801 tcgttttcgc gcattgagcg aatcaacaaa agccatcgct aaacccacgg ctaacccggc
     7861 gatgtgtgct ccgttcgcca tcgacatccc aaacaaatca aaccatccgg cgataatcca
     7921 gatcagcgca aagataatta acccacgttg caggtaaatg ccactttgcg gatcgcgctc
     7981 accacgtagc cagacgtagc ccatcagcgc atacaccacg ccagaaagcc cgccaaacca
     8041 cggcccgctg aatttttgct gcacatagcc gcttaacagg gcactaatga gagtaataac
     8101 aattagctta ccgctaccga ggcgtttttc caccgcaccg ccgagatacc accaccagag
     8161 caggttaaag aggatatgca tcagcgagaa gtgcattaac gcgtgggtga agtaacgcca
     8221 gaactcaaat ttcagtgttg gatcgaatgg ccaggccagc cataacatca cttcctgatc
     8281 gccgagaatt tgcatggcga taaacaccac cacgcaggcg atcatcacca cccaggttac
     8341 cggacctgcg cgttcacgca aggcagcaaa gaaaggataa cggcgataat gcagaccact
     8401 gccggtatgg cccgcctgcc agctggccgc cagataacgc ggatctgccg ggttttcgag
     8461 aaaacgcgcc agctccgccc gcacgcgctc ggcctgggac tcatccgcca gccagacatc
     8521 gctttggtta tgttgttgaa tcgtaaggat aacaccctgc gtcgccatgt aatcaacaaa
     8581 cgcctgcgcc acgcgggggt tagcaaaaga ggtaatcatc aacatcgttg ctgtcgctta
     8641 ttccacacaa aaggggacag tataaagcgt tacgcgccgt acgccacctc tgcgggaaac
     8701 tgacgctgcc aggcttcaaa accgccgtca atgctataga ccacatcgta gccctgttgc
     8761 agcagatact gcgccgcgcc tttgctgcta ttgccgtgat aacacatcac catcaccgga
     8821 gtgtcaaagt cgttatcacg cataaacgcg cccagcgtgt cgttggttaa atggaaagcc
     8881 tgcaccgcat gtcccattgc gaaactctgt ggatcgcgaa tatcgaccag caccgcctct
     8941 ttttcctgca acttctggtg cgcgtcggca acgttaatac attcgaacag atccatgcgt
     9001 ctctctttct ttacaaacaa gtgggcaaat ttaccgcaca gtttacgtcg aagcggcaga
     9061 taaacgccat aatgttatac atatcactct aaaatgtttt ttcaatgtta cctaaagcgc
     9121 gattctttgc taatatgttc gataacgaac atttatgagc tttaacgaaa gtgaatgagg
     9181 gcagcatgga aaccaaagat ctgattgtga taggtggcgg catcaatggt gctggtatcg
     9241 cggcagacgc cgctggacgc ggtttatccg tgctgatgct ggaggcgcag gatctcgctt
     9301 gcgcgacctc ttccgccagt tcaaaactca ttcacggtgg cctgcgctac cttgagcact
     9361 atgaattccg cctggtcagc gaggcgctgg ctgaacgtga agtgctgctg aaaatggctc
     9421 cgcatatcgc cttcccaatg cgttttcgcc tgccacatcg tccgcatctg cgcccggcgt
     9481 ggatgattcg gattggtctg tttatgtacg atcatctggg taaacgcacc agcctgccgg
     9541 gatcaaccgg tttgcgtttt ggcgcaaact cagtgttaaa accggaaatt aagcgcggat
     9601 tcgaatattc tgactgttgg gtagacgacg cccgtctggt actcgccaac gcccagatgg
     9661 tggtgcgtaa aggcggcgaa gtgcttactc ggactcgcgc cacctctgct cgccgcgaaa
     9721 acggcctgtg gattgtggaa gcggaagata tcgataccgg caaaaaatat agctggcaag
     9781 cgcgcggcct ggttaacgcc accggcccgt gggtgaaaca gttcttcgac gaggggatgc
     9841 atctgccttc gccttatggc attcgcctga tcaaaggcag ccatattgtg gtgccgcgtg
     9901 tgcataccca gaagcaggcc tacattctgc aaaacgaaga taaacgtatt gtgttcgtga
     9961 tcccgtggat ggacgaattt tccatcatcg gcaccaccga cgtagagtat aaaggcgatc
    10021 cgaaagcggt gaagattgaa gagagtgaaa tcaactatct gctgaaagtg tataacgcgc
    10081 actttaaaaa acagcttagc cgtgacgata tcgtctggac ctactccggt gtgcgtccgc
    10141 tgtgtgatga tgagtccgac tcgccgcagg ctattacccg tgattacacc cttgatatcc
    10201 atgatgaaaa cggcaaagca ccgctgctgt cggtattcgg cggtaagctg accacctacc
    10261 gaaaactggc agaacatgcg ctggaaaaac tgacgccgta ttatcagggt attggcccgg
    10321 cgtggacgaa agagagcgtg ctgccgggtg gtgccattga aggcgaccgc gacgattacg
    10381 cagctcgtct gcgccgtcgc tatccattcc tgactgaatc gctggcgcgt cattacgcac
    10441 gcacttacgg cagcaacagc gagctgctgc tcggcaatgc gggggcgata agcgacctcg
    10501 gggaggattt cggtcatgag ttctacgaag cggaactgaa atacctggtg gatcacgaat
    10561 gggtccgccg caccgacgat gccctttggc gtcgcacaaa acaaggcatg tggctgaatg
    10621 cggatcaaca atctcgtgtg agtcagtggc tggtggaata tacgcagcag aagttgtcgc
    10681 tggcgtcgta aggatgatgc ccggttgaag tgcaaccggg ctatttggat tccttagact
    10741 attcattgta aataattgaa taacggcccc tgagctaaaa tcgccaaact taagcacgtt
    10801 acccaatcgc cccacttctt cctctggttt ctattttttc tgcaccaatg gcaataatat
    10861 cccaatgcaa aaccaagctg tgcactaatc gggccgacaa aatcagtcca aggctgcggc
    10921 caaaaagggg aaaaattcag gggaggccag acaaacgtca gaaagaaatt tcggatattt
    10981 tccagcaacg ctgatttctc tggagaaata taaagaatga aattcgagag aattaaccag
    11041 aaatagaccg gcgaaaagac cagccagcaa tgcagtctgt tttttaattc aggaggcgtt
    11101 ctgcgggaga attgccaacc gatgccagcc attacac
//
LOCUS       DADKRT010000143        11118 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.145, whole genome shotgun sequence.
ACCESSION   DADKRT010000143 DADKRT010000000
VERSION     DADKRT010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11118
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.145"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..243
                     /locus_tag="JQ356_003159"
                     /pseudo
     CDS             1..243
                     /locus_tag="JQ356_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
     gene            414..761
                     /locus_tag="JQ356_003160"
     CDS             414..761
                     /locus_tag="JQ356_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidH family protein"
                     /protein_id="HAY4623166.1"
                     /translation="MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAP
                     DFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMV
                     VAVIVMGLVLYAG"
     gene            751..1113
                     /locus_tag="JQ356_003161"
     CDS             751..1113
                     /locus_tag="JQ356_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HAY4623167.1"
                     /translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
                     QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
                     LFAVTHIHQLIVFIERVA"
     gene            1110..1607
                     /locus_tag="JQ356_003162"
     CDS             1110..1607
                     /locus_tag="JQ356_003162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HAY4623168.1"
                     /translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLI
                     PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGGENP
                     QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
                     MTMLR"
     gene            complement(1615..2799)
                     /gene="emrD"
                     /locus_tag="JQ356_003163"
     CDS             complement(1615..2799)
                     /gene="emrD"
                     /locus_tag="JQ356_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HAY4623169.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
                     VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
                     SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
                     WRACYLFLLVLCVGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
                     GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
                     SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGT
                     AGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQ
                     PV"
     gene            complement(3218..3307)
                     /gene="tisB"
                     /locus_tag="JQ356_003164"
     CDS             complement(3218..3307)
                     /gene="tisB"
                     /locus_tag="JQ356_003164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HAY4623170.1"
                     /translation="MSLVDIAILILKLIVAALQLLDAVLKYLK"
     gene            3872..3970
                     /gene="ivbL"
                     /locus_tag="JQ356_003165"
     CDS             3872..3970
                     /gene="ivbL"
                     /locus_tag="JQ356_003165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HAY4623171.1"
                     /translation="MTTSMFNAKLLPTALSAAVVVVRVVVVVGNAP"
     gene            4076..5764
                     /gene="ilvB"
                     /locus_tag="JQ356_003166"
     CDS             4076..5764
                     /gene="ilvB"
                     /locus_tag="JQ356_003166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HAY4623172.1"
                     /translation="MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYD
                     ALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDS
                     IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQS
                     GRPGPVWIDIPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYL
                     GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEA
                     DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
                     IPQVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVG
                     QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMN
                     IQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFG
                     LETCDLNNEADPQAALQDIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
     gene            5768..6058
                     /locus_tag="JQ356_003167"
     CDS             5768..6058
                     /locus_tag="JQ356_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase isozyme 1 small subunit"
                     /protein_id="HAY4623173.1"
                     /translation="MQNTTHNNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
                     QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
     gene            6132..6722
                     /gene="uhpA"
                     /locus_tag="JQ356_003168"
     CDS             6132..6722
                     /gene="uhpA"
                     /locus_tag="JQ356_003168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HAY4623174.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
                     ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
     gene            6722..8224
                     /gene="uhpB"
                     /locus_tag="JQ356_003169"
     CDS             6722..8224
                     /gene="uhpB"
                     /locus_tag="JQ356_003169"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine-protein
                     kinase/phosphatase UhpB"
                     /protein_id="HAY4623175.1"
                     /translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
                     YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
                     YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
                     IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
                     RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
                     ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG
                     IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
                     DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
     gene            8234..9553
                     /gene="uhpC"
                     /locus_tag="JQ356_003170"
     CDS             8234..9553
                     /gene="uhpC"
                     /locus_tag="JQ356_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418123.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter family glucose-6-phosphate
                     receptor UhpC"
                     /protein_id="HAY4623176.1"
                     /translation="MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYF
                     TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
                     EWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
                     MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
                     SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
                     ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA"
     gene            9691..11082
                     /gene="uhpT"
                     /locus_tag="JQ356_003171"
     CDS             9691..11082
                     /gene="uhpT"
                     /locus_tag="JQ356_003171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HAY4623177.1"
                     /translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
                     SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
                     GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
                     ALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
                     TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
                     IRREKKIQQLTVA"
BASE COUNT         2442 a         2893 c         3144 g         2639 t
ORIGIN      
        1 gtggcggtca ggtgcttgct gttccgccag cgttgcgcgt gctgtggtca tacagcgaaa
       61 gaaaatcgcc tgtcacaaag taaattcaga tgccaggtat gtggatatac agcgaacgcc
      121 gatgtaaatg gcgctcgtaa cattttagcg gcggggcacg ccgttcttgc ctgtggagag
      181 atggtgcagt caggccgccc gttgaagcag gaacccaccg aaatgattca ggcgacagcc
      241 tgaacgtagc agggatcctc gtccttcagg gcgtggagga tgtcaatttg cgctatgata
      301 cccatctgac ctccttgtag cggatggcaa aagcatatca ggaaacgggc ggacgaaatt
      361 cttaaaaaaa accgctaaag atagagcgtt agtgaaattg caaaggagca acaatgaaaa
      421 tttcccgcct tggagaagcg cccgattacc gcttctcgct ggctaatgag cgtacttttc
      481 tggcgtggat ccgtaccgca ctaggatttc tggcggcggg ggttgggctt gatcaacttg
      541 cgccagattt cgccacgccc gtcattcgtg aactgctggc gttgttgttg tgtctgtttt
      601 ccggcgggtt agcaatgtat ggctacctgc gctggttacg caatgaaaaa gcgatgcgtc
      661 tgaaagagga cctgccctac accaacagct tattaatcat tagcttaata ttgatggtcg
      721 tggcggtgat cgttatggga ctggtgttgt atgccggata gccgcaaagc cagacgcatt
      781 gccgacccag gactgcagcc ggagcgcaca tcactggcgt ggtttcgtac catgctgggc
      841 tacggcgcgt tgatggcgtt ggctatcaaa cacaactggc accaggcggg catgttattc
      901 tggatttcga ttggcattct cgccatcgtg gcgctgatcc tctggcacta cacccgtaat
      961 cgcaatttaa tggatgtcac gaatagcgat ttttcccaat ttcacgtagt ccgtgacaaa
     1021 tttttgatct ccctcgcggt gttatctctc gcaatactgt ttgctgtaac gcatatacat
     1081 caacttatcg tatttattga gagagtcgca tgacaggaag tcaggtcatt gatgctgaag
     1141 aggacaggca taaactggtt gtagagtaca aggatgctct gcaacctgcc gatttttatc
     1201 acaatttcaa acagcggggc atccgctccg tacagctcat tccctatctt gaatttgatg
     1261 accggggcga tctgacggcc gcttcggtga cagcagagct gtgggggaaa tttttaattg
     1321 ccctgttcga gtgttgggtg cgggcagata tcagtcgtat ctcgattgag ctttttgacg
     1381 ccaccttaca aaaatggtgt ggcggcgaaa acccgcaacc gcgccgtgac tgccaggcgt
     1441 gcgactggca tcgcctgtgc ccgcacgctc ggcaggagac gccagacagc gtgctttgtg
     1501 cgggctatca ggcgttttat tcttactccg caccgcatat gcgggtgatg cgtgatctga
     1561 taaagcagca tcgttctccc atggagctga tgacgatgct gcggtgacgt gcgcttaaac
     1621 gggctgcccc tgatgcgaca tccgcgtcgc cagcggcagc cagcacagca cgatcaacaa
     1681 tcccattaag gtcatcaata accccaggct accctgaccg gtttgcggca acatcgcaga
     1741 gagcgacgcc agcacgccgg aaccaatgtt ttgcagaccg ccgaccagcg cgccagccgt
     1801 gcccgccagg aaggggaacg gctccatcgc gccgctggtc gccagcggaa acagcatccc
     1861 ggcaccgaaa aagaacagcg cggcgggaac gagcagcgtc cagacattca tcacgccaaa
     1921 ccagtcgggg atccacatca gcaagccagc cagcaggcag cagataaccg actgccacat
     1981 taacgtggag aagcgtttat tgggacgtcc ggcaaaccat gcgccaaaaa acgctgccgg
     2041 aatcggcaga ataaacaaaa tactgaccgt catactgctc agccctaaca ccgcgcccat
     2101 cagcacgccg gagcaggctt caaaggcggc aatcccggcc agaccgccaa tcagcatcag
     2161 caaataacag ttaaaaccgc tgttaccgaa aagcgtttta taactggtaa gcaggcgcgt
     2221 gcgcggtgca tcgaccggac gcgtttccgg catccagcgg gccatactga aggtcacacc
     2281 aacacaaaga accaacaaaa agagataaca ggcgcgccag ttccacatcg tatccagcag
     2341 accgccgatt agcggtgcga gcaacggact gacgagaatc cccatgttta acaggctgtt
     2401 agcatggcgc aactgtgtcc gttcatataa atctcgcggc aaagtacgcg ccattacgcc
     2461 gccaacgccg gtgcccatcc cctgcatcgc gctggcggca atcaataccg tcaaactgga
     2521 ggtcgtgacc gcgaccagcg ttgccagcat aaaaatggac attccgacga ggatcaccgg
     2581 tcggcgaccc acacggtcgg aaatcgggcc ataaaacagc tgtgagacac cgtaagtcag
     2641 cagataagcg cccattacgc tctgcaccgc cccttcacgg acgttgagat cgcgcgccat
     2701 atcggcaata gctggaatat aaatggtttg cgccatctga ccgacggcca cgagtaatac
     2761 caacatcaat aacaaattga cgtttctttg ccttttcatt atcacggatg cttttataaa
     2821 aataattaga ataagtcact acgcattccc ataaatgcgg gagaggaatc tatcacattg
     2881 atgaatgtta gccagatata cgccaggaat ggggaattgt ttagcggcag aatatgtaaa
     2941 caaaagcggc aataaatgtt gtcgggaggg attacgtgcg aactgtaacc ctctccccaa
     3001 aggggcgagg gggaaaccac cgttcccttt cagaaaatga gctaaacatt gcacgggacg
     3061 gtcccctcgc ccctttgggg agagggctgg ggtgaggggc acaggcagcg caggtgcaaa
     3121 cattctgctg gtagaagaag cccccaactc caacccgcac gctaaatata aaaggggagc
     3181 ggttacccgc tcccctttgg tgcgacttga atctgaatta cttcaggtat ttcagaacag
     3241 catcaagcag ttgcagtgct gcaacaatga gtttgaggat aagaatggcg atatccacca
     3301 ggctcatacg cgtctcctgt ggttcaggag cactgccagc tgacgtacct ttccgctgcc
     3361 tgttgccagc tgttgtgcac gcggtatctc aaggagaaac gttgtgcttg ttgacataac
     3421 acagtgtgct cacgcggggt taaggcgctg acggcaccac ccgtttcagc caggacttag
     3481 tgcgccgggt aacgatgcgg cccccgcata atacattgcg tacagtgata ttatagaagt
     3541 ttactgtata aataaacagt gatatttgga caaaacgcaa actgtgatcg atactcaact
     3601 atgccctaaa tacgtcaaaa ttcgtgccga aattgcgcgt tctgcgcgga acacgtatac
     3661 tttcagtgtt gacataatac agtgtgcttt gcggttacca gctgcaggcg gctgatgaaa
     3721 cctcgctccg gcggggtttt ttgttacctg caattcagta caaaacgtga tcagcccctc
     3781 aattttccct tgctgaaaaa ttttccattg tctcccctgt aaagctgtgc ttgtataaat
     3841 attgttaaac acaaaaccaa caaggtcccc aatgactact tccatgttca acgcaaaact
     3901 actaccaact gcgctatccg ccgcagtggt cgtcgtgcgt gtggtggtgg tcgtcggcaa
     3961 tgcgccgtag ggactggaac aacacacgat tccaaaaccc cgccggcgca aaccgggcgg
     4021 ggtttttcgt ttaagcacct cccggaaagt cggcccagaa gaaaaggact ggagcatggc
     4081 aagttcgggc acaacatcga cgcgtaagcg ctttaccggc gcagaattta tcgttcattt
     4141 cctggaacag cagggcatta agattgtgac gggcattccg ggcggttcta tcctgcctgt
     4201 ttacgatgcc ttaagccaaa gcacgcaaat ccgccatatt ctggcccgtc atgaacaggg
     4261 cgcgggattt atcgctcagg ggatggcgcg caccgacggt aaaccggcgg tctgtatggc
     4321 ctgtagcgga ccgggtgcga ctaacctggt gaccgccatt gccgatgcgc ggctggactc
     4381 catcccgctg atttgcatca ccggtcaggt tcccgcctcg atgatcggca ccgacgcctt
     4441 ccaggaagtg gacacctacg gcatctctat ccccatcacc aaacacaact atctggtcag
     4501 acatatcgaa gaactcccgc aggtcatgag cgatgccttc cgcattgcgc aatcaggccg
     4561 cccaggcccg gtgtggatag acattcctaa ggatgtgcaa acggcagttt ttgagattga
     4621 aacacagccc gctatggcag aaaaagccgc cgcccccgcc tttagtgaag aaagcattcg
     4681 tgacgcagcg gcgatgatta acgctgccaa acgcccggtg ctttatctgg gcggcggtgt
     4741 gatcaatgcg cccgcacggg tgcgtgaact ggcggagaaa gcgcaactgc ctaccaccat
     4801 gactttaatg gcgctgggca tgttgccaaa agcgcatccg ttgtcgctgg gtatgctggg
     4861 gatgcacggc gtgcgcagca ccaactatat tttgcaggag gcggatttgt tgatagtgct
     4921 cggtgcgcgt tttgatgacc gggcaattgg caaaaccgag cagttctgtc cgaatgccaa
     4981 aattattcat gtcgatatcg atcgcgcaga gctgggtaaa atcaagcagc cgcatgtggc
     5041 gattcaggcg gatgttgatg acgtgctggc gcaattgatc ccgcaggtgg aagcgcaacc
     5101 gcgtgcagag tggcaccagt tggtagcgga tttgcagcgc gaattcccgt gtccaatccc
     5161 gaaagcgtgc gatccattaa gccattacgg cctgatcaac gccgttgccg cctgtgtcga
     5221 tgacaatgcg attatcacca ccgatgtggg tcagcatcag atgtggaccg cgcaagctta
     5281 tccgctcaat cgcccacgcc agtggctgac ctccggtggg ctgggcacga tgggttttgg
     5341 cctgcctgcg gcgattggcg cggcgctggc gaacccggat cgcaaagtgt tgtgtttctc
     5401 cggcgacggc agcctgatga tgaatattca ggagatggcg accgccagtg aaaatcagct
     5461 ggatgtcaaa atcattctga tgaacaacga agcgctgggg ctggtgcatc agcaacagag
     5521 tctgttctac gagcaaggcg tttttgccgc cacctatccg ggcaaaatca actttatgca
     5581 gattgccgcc ggattcggcc tcgaaacctg tgatttgaat aacgaagccg atccgcaggc
     5641 tgcattgcag gatatcatca atcgccctgg cccggcgctg atccatgtgc gcattgatgc
     5701 cgaagaaaaa gtttacccga tggtgccgcc aggtgcggcg aatactgaaa tggtggggga
     5761 ataagccatg caaaacacaa ctcataacaa cgtaattctg gagctcaccg ttcgcaacca
     5821 tccgggcgta atgacccacg tttgtggcct ttttgcccgc cgcgctttta acgttgaagg
     5881 cattctttgt ctgccgattc aggacagcga caaaagccat atctggctac tggtcaatga
     5941 cgaccagcgt ctggagcaga tgataagcca aatcgataag ctggaagatg ttgtgaaagt
     6001 gcagcgtaat cagtccgatc cgacgatgtt taacaagatc gcggtgtttt ttcagtaacc
     6061 gctcaaggct tgaacaacat cgcgcttatc gttaaggtaa gcgcgttttt tttacccgcc
     6121 aggacaagac catgatcacc gttgccctta tagacgatca cctcatcgtc cgctccggct
     6181 ttgcgcagct gctggggctg gaacctgatt tgcaggtagt tgccgagttt ggttcggggc
     6241 gcgaggcgct ggcggggctg ccggggcgcg gtgtgcaggt gtgtatttgc gatatctcca
     6301 tgcccgatat ctccggtctg gagctgctaa gccagctgcc gaaaggtatg gcgacgatta
     6361 tgctctccgt tcacgacagt cctgcgctgg ttgagcaggc gcttaacgcg ggggcacgcg
     6421 gctttctttc caaacgctgt agcccggatg aactcattgc tgcggtgcat acggttgcca
     6481 cgggcggctg ttatctgacg ccggatattg ccattaaact ggcatccggt cgtcaggacc
     6541 cgctaaccaa acgtgaacgc caggtggcgg aaaaactggc gcaaggaatg gcggtgaaag
     6601 agattgccgc cgaactgggc ttgtcaccga aaacggtaca cgtccatcgc gccaatctga
     6661 tggaaaaact gggcgtcagt aacgacgtag agctggcgcg ccgcatgttt gatggctggt
     6721 gatgaagacg ttgttctccc gcttaattac cgttattgcc tgctttttta tcttctctgc
     6781 cgcatggttt tgcctgtgga gtatcagcct gcatctggtt gagcgccctg atatggcggt
     6841 gctgttattt ccgtttggtc tgcgtctggg gctaatgctg caatgcccgc gcggatactg
     6901 gccggtgctg ctgggcgcgg agtggctgct gatttactgg ctaacgcagg cggtcggttt
     6961 aacccatttt ccgttattga tgatcggtag tttactgacg ttactgcccg tagcgctgat
     7021 ctcgcgctat cgccatcagc gtgactggcg caccttgctg ttacaggggg cggcgttaac
     7081 ggcggcggcg ttgttgcaat cgctgccctg gctttggcac ggcaaagagt cgtggaatgc
     7141 gctgttgctg actttaactg gcggcctgac gctggccccg atatgtctgg tgttctggca
     7201 ctatctcgcc aataacacct ggctgccgct cggcccgtca ctggtttctc agccaatcaa
     7261 ctggcgcggg cgacatctgg tctggtactt gctgctgttt gttatcagtc tctggctcca
     7321 gttgggattg ccggacgaac tgtcgcgctt tacgccattc tgtctggcgc tgccgattat
     7381 cgcgctggcc tggcactatg gttggcaagg ggcgctgatt gcgacgttga tgaacgccat
     7441 cgcgctgatc gccagtcaaa cctggcgcga tcatccggtg gatttattgc tctcgctgct
     7501 ggtgcaaagt ctgacagggt tgttgcttgg cgctggcatc cagcggttgc gtgaacttaa
     7561 ccagtcgctg caaaaggaac tggcgcgcaa tcagcatctg gctgaacggt tgctggaaac
     7621 cgaagagagc gtgcgccgtg atgtggcgcg tgagctgcat gatgatatcg gtcagaccat
     7681 cactgctatt cgtactcagg cgggcattgt tcagcggctg gcggcagata acgccagcgt
     7741 gaagcagagc gggcagctca tcgaacaact atcgctgggc gtttacgacg cggtgcgccg
     7801 tttgttgggt cggttacgtc cgcgccagtt ggatgatctc accctggagc aggccatccg
     7861 ctcactgatg cgggaaatgg agctggaagg gcgcggtatt gtcagccatc tcgaatggcg
     7921 aatcgatgaa tcagcgttaa gcgaaaacca gcgcgtgacg ctgtttcgtg tctgccagga
     7981 agggctgaac aacattgtga aacatgctga tgccagcgcg gtcaccctgc aaggctggca
     8041 gcaggatgaa cggttgatgc tggttattga agacgatggc agcggtttgc cgccgggttc
     8101 cgggcaacaa ggttttggcc tcaccggaat gcgcgagcgc gtaacggcgc tgggtggcac
     8161 attacacatt tcctgtctgc acggcacgcg tgtcagcgtt tctctacctc aacgctatgt
     8221 ctaaggtttg atgatgttgc cgtttctgaa agcgcctgcc gatgcgccat taatgactga
     8281 taaatatgaa attgatgccc gctatcgcta ctggcgtcgg catattctgc tgaccatctg
     8341 gctgggttac gcgctgtttt acttcacgcg gaaaagtttt aacgccgccg taccagaaat
     8401 ccttgctaac ggcgtgctca gccgtagcga tatcggcctg ttagcgaccc tgttttacat
     8461 tacctatggc gtgtcgaagt ttgtctccgg cattgtcagc gatcgctcaa atgcccgtta
     8521 ttttatgggg atagggctta tcgccacggg cattatcaac attctgtttg gcttctcgac
     8581 gtcgctatgg gcgtttgccg tactctgggt gctgaacgcc tttttccagg gctggggttc
     8641 accggtgtgt gcgcgtctgt taacggcctg gtattcacgt accgagcgcg gtggttggtg
     8701 ggcattatgg aacacggcgc ataacgtcgg cggcgcactc attcccattg tgatggcagc
     8761 ggctgcacta cattacggct ggcgtgccgg gatgatgatt gctggttgta tggcgatcgt
     8821 cgtgggaatt tttctctgct ggcggctgcg cgatcgcccg caggcgttag gtttaccggc
     8881 ggtcggtgaa tggcgacacg acgcgctgga gatagctcaa caacaagaag gggcagggct
     8941 gacgcgtaaa gagatcctca ccaaatatgt gttgctgaat ccgtatatct ggctgctttc
     9001 gttttgctat gtgctggtct atgtggtccg ggcggcgatc aacgactggg gcaatttgta
     9061 tatgtccgag acgctgggcg tcgatctggt cacggcgaat acggcagtga cgatgtttga
     9121 actgggtgga tttatcggtg cgctggtagc gggttggggc tcggacaaat tgtttaacgg
     9181 caaccgaggg ccgatgaatt tgattttcgc cgccggaatt ttgctttcag tcggctccct
     9241 gtggctgatg ccatttgcca gctacgtgat gcaggcaacc tgcttcttca ccattggttt
     9301 ttttgtcttt ggcccacaga tgttaatcgg tatggcggcg gcagagtgtt cccacaaaga
     9361 ggcggcaggg gcggcgacgg ggtttgtcgg cttgtttgct tatctggggg cgtcgcttgc
     9421 tggttggccg ctggcgaaag tactcgatac ctggcactgg agcggatttt ttgtggttat
     9481 ctctatcgcc gccgggattt ccgcactgct gttactgccc tttttgaacg cccagacacc
     9541 gcgcgaagcg tgatgcatct caccttttca cttcatatcc ggcaaaacta agaaattttc
     9601 caggttttgc ctggacgcta tctcaggcct gatttgctgc tgatttttac aatgcatgcc
     9661 tcacgcaggt attcatttca ggagtaaccc atgctggctt tcctaaacca ggttcgcaag
     9721 ccgaccctgg accttccgct cgaagtgcgg cgcaaaatgt ggttcaaacc gttcatgcaa
     9781 tcctacctgg tggtctttat cggctacctg acgatgtacc tgattcgcaa gaactttaac
     9841 atcgcgcaga acgatatgat ttcgacctac gggttgagca tgacgcagct ggggatgatc
     9901 ggcctgggtt tctccatcac ttatggcgtg ggtaaaacgt tggtttcata ctacgccgac
     9961 ggcaaaaaca ccaaacaatt cctgccgttc atgctgatcc tgtctgccat ttgtatgctg
    10021 ggcttcagtg ccagtatggg cagcggctcg gttagcctgt tcctgatgat tgccttctac
    10081 gccttaagcg gctttttcca gagtaccggc ggttcgtgca gttactccac catcaccaaa
    10141 tggacgccgc gtcgtaaacg cgggacattc ctcggtttct ggaatatttc tcacaacctt
    10201 ggcggtgcag gcgcagcagg tgtggcgctg ttcggggcaa attacctgtt cgatggccat
    10261 gtcatcggca tgtttatctt cccgtcgatt atcgcgctga ttgtcggttt tatcggcctg
    10321 cgttacggca gcgactcccc agaatcttat ggcctcggca aagctgaaga actgttcggc
    10381 gaggagatca gcgaagagga caaagagaca gaatctaccg atatgaccaa gtggcagatc
    10441 tttgttgagt atgtgctgaa aaacaaagtg atctggctgc tgtgcttcgc caacattttc
    10501 ctctatgtgg tacgtattgg tatcgaccag tggtcaaccg tatacgcgtt ccaggaactg
    10561 aaactctcta aagcggtggc gattcagggc tttacgctgt ttgaagctgg tgcgctggtc
    10621 ggtacgctgc tgtggggctg gctctctgac ctggcgaacg gtcgccgtgg cctggtggcc
    10681 tgcatcgcgc tggcgctgat tatcgccacg ctcggtgtgt atcaacatgc cagcaacgaa
    10741 tatatctatc tggcttctct ctttgcgttg ggtttcctgg tctttggccc gcaattgttg
    10801 attggtgtgg ctgctgttgg ctttgtacct aaaaaagcga ttggcgctgc cgatggtatt
    10861 aaaggcacct ttgcttacct gattggtgac agctttgcca agttaggtct gggaatgatt
    10921 gccgatggga cgccggtatt cggccttacc ggctgggcag gcaccttcgc cgcacttgat
    10981 atcgccgcga ttggttgtat ctgcctgatg gcgatagtgg cggtgatgga agaacgcaaa
    11041 atccgccgcg agaaaaaaat tcagcagttg acagtggcat aaacgtaact ggtgactttt
    11101 gcccggcatg acgccggg
//
LOCUS       DADKRT010000144        10929 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.146, whole genome shotgun sequence.
ACCESSION   DADKRT010000144 DADKRT010000000
VERSION     DADKRT010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10929
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.146"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1072
                     /locus_tag="JQ356_003172"
     CDS             <1..1072
                     /locus_tag="JQ356_003172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY4623178.1"
                     /translation="IEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVI
                     RYDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPT
                     PFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAV
                     FSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLS
                     CRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMP
                     PVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEEN
                     QGSNLSGPFLPGQSRTFSYRLA"
     gene            1920..3488
                     /gene="cydA"
                     /locus_tag="JQ356_003173"
     CDS             1920..3488
                     /gene="cydA"
                     /locus_tag="JQ356_003173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HAY4623179.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD
                     QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSSTTTQPAR"
     gene            3504..4643
                     /gene="cydB"
                     /locus_tag="JQ356_003174"
     CDS             3504..4643
                     /gene="cydB"
                     /locus_tag="JQ356_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY4623180.1"
                     /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
                     FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
                     GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP
                     LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
     gene            4658..4771
                     /gene="cydX"
                     /locus_tag="JQ356_003175"
     CDS             4658..4771
                     /gene="cydX"
                     /locus_tag="JQ356_003175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HAY4623181.1"
                     /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI"
     gene            4771..5064
                     /gene="ybgE"
                     /locus_tag="JQ356_003176"
     CDS             4771..5064
                     /gene="ybgE"
                     /locus_tag="JQ356_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HAY4623182.1"
                     /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
                     ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIIGLIFFFF"
     gene            5214..5618
                     /gene="ybgC"
                     /locus_tag="JQ356_003177"
     CDS             5214..5618
                     /gene="ybgC"
                     /locus_tag="JQ356_003177"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY4623183.1"
                     /translation="MNTTLFRWPARVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
                     LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
     gene            5615..6307
                     /gene="tolQ"
                     /locus_tag="JQ356_003178"
     CDS             5615..6307
                     /gene="tolQ"
                     /locus_tag="JQ356_003178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HAY4623184.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            6311..6739
                     /gene="tolR"
                     /locus_tag="JQ356_003179"
     CDS             6311..6739
                     /gene="tolR"
                     /locus_tag="JQ356_003179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HAY4623185.1"
                     /translation="MARARGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
                     PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            6804..7985
                     /gene="tolA"
                     /locus_tag="JQ356_003180"
     CDS             6804..7985
                     /gene="tolA"
                     /locus_tag="JQ356_003180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HAY4623186.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
                     GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
                     LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA
                     KKAAADAKKKAEAEAAKAAAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEKAK
                     AEAEKKAAAEKAAADKKAAADKKAAEKAAAEKAAADKKAAAEKAAAEADDIFGELSSG
                     KNAPKTGGGAKGNNASPAGSGNTKNNGASGADINNYAGQIKSAIESKFYDASSYAGKT
                     CTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFK
                     P"
     gene            8118..9410
                     /gene="tolB"
                     /locus_tag="JQ356_003181"
     CDS             8118..9410
                     /gene="tolB"
                     /locus_tag="JQ356_003181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HAY4623187.1"
                     /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPSAWSALGIDAVVVG
                     QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
                     SGQIRQVTDGRSNNTEPTWFPDSQNLVFTSDQAGRPQVYKVNINGGAPQRITWEGSQN
                     QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
     gene            9445..9966
                     /gene="pal"
                     /locus_tag="JQ356_003182"
     CDS             9445..9966
                     /gene="pal"
                     /locus_tag="JQ356_003182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HAY4623188.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
                     ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
                     VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
                     AAYSKNRRAVLVY"
     gene            9976..10767
                     /gene="cpoB"
                     /locus_tag="JQ356_003183"
     CDS             9976..10767
                     /gene="cpoB"
                     /locus_tag="JQ356_003183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HAY4623189.1"
                     /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
                     SGGAAAQSTSSDQSGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
                     DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
                     AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
BASE COUNT         2715 a         2557 c         2915 g         2742 t
ORIGIN      
        1 aattgaagaa agctctgatg atggtgatga atatgactat tcacccgcaa aagaagagtg
       61 ggtaattacc gcagcgaacg cgaaaccgca atgcgatatt attcatgaag cctggcagag
      121 cagggctgtt atccgctatg acatggcagt gccgctcaat ttgtcagaac gcagcgcccg
      181 gcaatccact ggcagagtag gggtggtgtt ggttgtcact cttagtcata acagcaggcg
      241 tattgatgtg gatatcaacc ttgataacca ggctgacgat catcgccttc gtgtcctggt
      301 ccctacacct tttaacaccg acagtgttct ggcagatacg cagtttggtt cgctaacgcg
      361 ccccgtgaac gacagtgcaa tgaacaactg gcagcaagaa ggctggaaag aagcgccggt
      421 tccggtatgg aatatgctca actatgttgc cttacaggaa gggcgtaacg gcatggctgt
      481 ctttagcgaa gggttacgtg aatttgaagt catcggtgaa gagaagaaaa cctttgccat
      541 tacgttgctg cgtggcgtgg gcttactggg caaagaagat ctgcttttaa ggcctgggcg
      601 gccttcggga attaaaatgc cagtcccgga ctcacaacta cgtggtctgc tttcttgtcg
      661 cctaagttta ttgagttata ccggtacgcc aaccgccgct ggtgtagctc agcaggcgcg
      721 agcatggctg actccagtac agtgttacaa caaaatccca tgggatgcga tgaagctcaa
      781 caaagccgga ttcaacgtgc cggaaagtta tagtttgttg aaaatgcccc cagtgggatg
      841 cctgataagc gcacttaaga aagctgaaga ccgacaagaa gtgattttac ggctgtttaa
      901 tccggctgaa tcagcaacct gtgatgcgac tgttgctttc agtcgcgagg tgatttcttg
      961 ctcagaaacg atgatggatg aacacattac caccgaggaa aatcaaggtt caaatctatc
     1021 ggggcctttt ttacccggcc agtcacggac gttcagttac cggcttgcct gaatagcaat
     1081 caaaccgaag ccacatatgc gcggccagat tgttgacaaa gggcgctttg ttcatgccgg
     1141 atacggcatg aacgctttat tcggtctaca aaagcaggca aattcaatat attgcagaga
     1201 tgatgtagac actggcaagc gtagcgcatc aggtaatttt gcgtttatct tcactctcaa
     1261 gccacgtata tgtggcttta tttttaacaa aataataacc ctgggtgagt taattataat
     1321 ataattataa gttaattaaa tgttaatatc ggcgggggtg gatttatgcc tttattagta
     1381 atcctgaaac tctgcgtcgt attagccagt gaccaaaaaa agaattaagg tcaaccgtgc
     1441 tgtttttgct tcgtctcttt ttatctttaa ttgccaaccg aaactaattt cagccttata
     1501 actcacacat tttaaacata aatgtcacta aagttacctt attgaaacat gattaacata
     1561 atttgtagga attgatattt atcaatgtat aagtcttgga aatgggcatc aaaaagagat
     1621 aaattgttct cgatcaaatt ggctgaaagg cggtaattta gctataaatt gatcaccgtc
     1681 gaaaaatgca aatttgcttc aacaaaaacc tgtttattgt aaggattttg cggcgtaata
     1741 tatacgtggg atcaatttga gtttttatta acatgtttgc aacctttctt tacgccgttt
     1801 ttgtgtgcat tcacatggta tgatgaaagt gttcaaacaa atttctattg gggcatgcgt
     1861 gtgacccttt ctaacggggt tcactctcgg agtcttcatg cgatgagcaa ggagtcatga
     1921 tgttagatat agtcgaactg tcgcgcttac agtttgcctt gaccgcgatg taccacttcc
     1981 tttttgtgcc actgacgctc ggtatggcgt tcctgctggc cattatggaa acggtctacg
     2041 tcctctccgg caaacagatt tataaagata tgaccaagtt ctggggcaag ttgtttggta
     2101 tcaacttcgc tctgggtgtg gctaccggtc tgaccatgga gttccagttc gggactaact
     2161 ggtcttacta ttcccactat gtaggggata tcttcggtgc gccgctggca atcgaaggtc
     2221 tgatggcctt cttcctcgaa tccacctttg taggtctgtt cttcttcggt tgggatcgtc
     2281 tgggtaaagt tcagcatatg tgtgtcacct ggctggtggc gctcggttca aacctgtccg
     2341 cactgtggat tctggttgcg aacggctgga tgcaaaaccc aatcgcgtcc gatttcaact
     2401 ttgaaactat gcgtatggag atggtgagct tctccgagct ggtgcttaac ccggttgctc
     2461 aggtgaaatt cgttcacact gtagcgtctg gttatgtgac tggcgcgatg ttcatcctcg
     2521 gtatcagcgc atggtatatg ctgaaaggtc gtgacttcgc cttcgctaaa cgctcctttg
     2581 ctatcgctgc cagcttcggt atggctgctg ttctgtctgt tattgttctg ggtgatgaat
     2641 ccggctacga aatgggcgac gtgcagaaaa ccaaactggc tgctattgaa gccgagtggg
     2701 aaacgcaacc tgcgcctgct gcctttactc tgttcggcat tcctgatcag gaagaggaga
     2761 cgaacaaatt tgcgattcag atcccttacg cactgggcat cattgcaacg cgttccgtgg
     2821 ataccccggt tatcggcctg aaagagctga tggtgcagca tgaagaacgc attcgtaacg
     2881 ggatgaaggc gtactctctg ctcgaacaac tgcgttctgg ttctaccgac caggcggttc
     2941 gtgaccagtt caatagcatg aagaaagacc tcggttacgg tctgctgctg aaacgctata
     3001 cgccaaacgt ggctgatgcg actgaagcgc agattcaaca ggcaactaaa gactccattc
     3061 cgcgtgtagc gccgctgtac ttcgcgttcc gtattatggt ggcgtgtggc ttcctgctgc
     3121 tggcaatcat cgcgctctct ttctggagtg tcatccgcaa ccgcattggc gagaaaaaat
     3181 ggctgctgcg cgccgcgctg tacggtattc cgctgccgtg gattgctgta gaagcgggct
     3241 ggttcgtggc tgaatatggc cgccaaccgt gggctatcgg tgaagtgctg ccgacagctg
     3301 tggcgaattc gtcactgacc gcaggcgatc tcatcttctc aatggtgctg atttgcggcc
     3361 tgtataccct gttcctggtg gcagaattgt tcttaatgtt caaatttgca cgcctcggcc
     3421 caagcagcct gaaaaccggt cgctatcact ttgagcagtc ttccacgact actcagccgg
     3481 cacgctaaga caggagtcgt caaatgatcg attatgaagt attgcgtttt atctggtggc
     3541 tgctggttgg cgttctgctg attggttttg cagtcactga cggtttcgac atgggggtgg
     3601 gcatgctcac ccgtttcctc ggtcgtaacg acaccgagcg tcgaattatg attaactcca
     3661 ttgcaccaca ctgggacggt aaccaggttt ggctgatcac cgcgggcggc gcactctttg
     3721 ctgcctggcc gatggtctat gccgctgcgt tctccggctt ctatgtggcg atgatcctcg
     3781 tgctggcgtc tttgttcttc cgtccggtcg gttttgacta ccgctccaag attgaagaaa
     3841 cccgctggcg taacatgtgg gactggggca tcttcattgg tagcttcgtt ccgccgctgg
     3901 taattggtgt tgcgttcggt aacctgttgc agggcgtacc gttcaacgtt gatgaatatc
     3961 tgcgtctgta ctacaccggt aacttcttcc agttgcttaa cccgttcggc ctgctggcag
     4021 gcgtggtgag cgtagggatg atcattactc agggcgcaac ctatctgcaa atgcgtaccg
     4081 tgggcgaact gcacctgcgt acccgtgcaa cggctcaggt ggctgcgctg gtgacactgg
     4141 tctgtttcgc actggctggc gtatgggtga tgtacggtat cgatggttat gtcgtgaaat
     4201 cgacaatgga ccattacgca gcctctaacc cactgaataa agaagtggtt cgtgaagctg
     4261 gcgcatggct ggttaacttc aacaacacgc caattctgtg ggctattccg gcactgggtg
     4321 tggttctgcc gctgctgacc atcctgactg cacgtatgga taaagccgcg tgggcgtttg
     4381 tgttctcctc cctgacgctg gcctgcatca tcctgacagc cggtatcgca atgttcccgt
     4441 ttgtgatgcc gtccagcacc atgatgaacg caagtctgac aatgtgggat gcaacttcca
     4501 gccagctgac gcttaacgtc atgacctggg ttgcggtggt tctggtaccg atcattctgc
     4561 tctacaccgc ctggtgttac tggaaaatgt tcggtcgtat caccaaagaa gatattgaac
     4621 gtaacaccca ctctctgtac taagtaagga gctaaaaatg tggtatttcg catggattct
     4681 gggaacgctt cttgcctgtt cgtttggggt aatcaccgcg ctggcgcttg aacacgtcga
     4741 atcaggcaaa gccggtcaag aagacatctg atgagtaaga ttatcgcgac cttgtatgcg
     4801 gtaatggaca agcgccccct gcgggcgctt tccttcgtga tggcgcttct gttagcagga
     4861 tgtatgtttt gggacccatc tcgttttgcc gcgaagacca gtgaactgga aatctggcat
     4921 ggtttattgc tgatgtgggc cgtctgtgct ggtgtgattc acggcgtggg ctttcgtccg
     4981 cagaaggttc tttggcaagg gattttttgc ccattgcttg ccgatattgt tctcattatc
     5041 gggctgattt tcttcttctt ttaaatcaga attctcttta aaaaattatg ggccgctcca
     5101 ggcccataaa tttttacgct cccttaactt gccctcattc ccaaacctca atcgcgcgcg
     5161 tatagtagca gcgtttaaaa gctctaactt ttgttgcatt accgggatgt aaagtgaata
     5221 caacgctgtt tcgatggccg gctcgcgtct actatgaaga taccgatgcc ggtggtgtgg
     5281 tgtaccacgc cagttacgtc gctttttatg aaagagcacg cacagagatg ctgcgtcatc
     5341 atcacttcag tcagcaggcg ctgatggctg aacgcgttgc ctttgtggta cgtaaaatga
     5401 cggtggaata ttacgcacct gcgcggctcg acgatatgct cgaaatacag actgaaataa
     5461 catcaatgcg tggcacctct ttggttttca cgcaacgtat tgtcaacgcc gagaatactt
     5521 tgctgaatga agcagaggtt ctggttgttt gcgttgaccc actcaaaatg aagcctcgtg
     5581 cgcttcccaa gtctattgtc gcggagttta agcagtgact gacatgaata tccttgattt
     5641 gttcctgaag gctagccttc tggttaaact tatcatgttg attttgattg gtttttcaat
     5701 cgcatcctgg gccattatta tccagcggac ccgtattctt aacgcagcgg cgcgcgaagc
     5761 cgaagcgttt gaagataaat tctggtctgg aatcgaactc tctcgcctct atcaagagag
     5821 tcaggggaaa cgggataatc tgactggttc ggaacaaata ttttacagcg ggttcaaaga
     5881 gtttgtgcgc ctgcatcgtg ccaatagcca tgcgccggaa gccgtagtgg aaggggcgtc
     5941 gcgtgctatg cgtatctcca tgaaccgtga acttgaaaat ctggaaacgc acattccgtt
     6001 cctcggtacg gttggctcca tcagcccgta tattggtctg tttggtacgg tctgggggat
     6061 catgcatgcc tttatcgccc tcggggcggt aaaacaagca acactgcaaa tggttgcgcc
     6121 cggtatcgca gaagcgttga ttgcgactgc aattggtctg tttgccgcta tcccggcagt
     6181 tatggcctac aaccgcctca accagcgcgt aaacaaactg gaactgaatt acgacaactt
     6241 tatggaagag tttaccgcga ttctgcaccg ccaggcgttt accgttagcg agagcaataa
     6301 ggggtaagtc atggccagag cgcgtggacg aggtcgtcgc gaacttaagt ccgaaatcaa
     6361 cattgtaccg ttgctggacg tactgctggt gctgttgctg atcttcatgg cgacagcgcc
     6421 catcatcacc cagagcgtgg aggtcgatct gccagacgct actgaatcac aggcggtgag
     6481 cagtaacgat aatccgccag tgattgttga agtgtctggt attggtcagt acaccgtggt
     6541 ggttgagaaa gatcgcctgg agcgtttacc accagagcag gtggtggcgg aagtgtccag
     6601 ccgcttcaag gccaacccga aaacggtctt tctgatcggt ggcgcaaaag atgtgcctta
     6661 cgatgaaata attaaagcac tgaacttgtt acatagtgcg ggtgtgaaat cggttggttt
     6721 aatgacgcag cctatctaaa catctgcgtt tcccttgctt gaaagagagc gggtaacagg
     6781 cgaacagttt ttggaaaccg agagtgtcaa aggcaaccga acaaaacgac aagctcaagc
     6841 gggcgataat tatttcagca gtgctgcatg tcatcttatt tgcggcgctg atctggagtt
     6901 cgttcgatga gaatatagaa gcttcagccg gaggcggcgg tggttcgtcc atcgacgctg
     6961 tcatggttga ttcaggtgcg gtagttgagc agtacaaacg catgcaaagc caggaatcaa
     7021 gcgcgaagcg ttctgatgaa cagcgcaaga tgaaggaaca gcaggctgct gaagaactgc
     7081 gtgagaaaca agcggctgaa caggaacgcc tgaagcaact tgagaaagag cggttagcgg
     7141 ctcaggagca gaaaaagcag gctgaagaag ccgcaaaaca ggccgagtta aagcagaagc
     7201 aagctgaaga ggcggcagcg aaagcggcgg cagatgctaa agcgaaggcc gaagcagatg
     7261 ctaaagctgc ggaagaagca gcgaagaaag cggctgcaga cgcaaagaaa aaagcagaag
     7321 cagaagccgc caaagccgca gcgcagaaaa aagccgaggc agccgctgcg gcactgaaga
     7381 agaaagcgga agcggcagaa gcagctgcag ctgaagcaag aaagaaagcg gcaactgaag
     7441 ctgctgaaaa agccaaagca gaagctgaga agaaagcggc tgctgaaaag gctgcagctg
     7501 ataagaaagc tgcagccgac aaaaaagcag cagaaaaagc ggctgctgaa aaggcagcag
     7561 ctgataagaa agcagcggca gaaaaagccg ccgcagaggc agatgatatt ttcggtgagc
     7621 taagctctgg taagaatgca ccgaaaacgg ggggaggggc gaaagggaac aatgcttcgc
     7681 ctgccgggag tggtaatact aaaaacaatg gcgcatcagg ggccgatatc aataactatg
     7741 ccgggcagat taaatctgct atcgaaagta agttctatga cgcatcgtcc tatgcaggca
     7801 aaacctgtac gctgcgcata aaactggcac ccgatggtat gttactggat atcaaacctg
     7861 aaggtggcga tcccgcactt tgtcaggctg cgttggcagc agctaaactt gcgaagatcc
     7921 cgaaaccacc aagccaggca gtatatgaag tgttcaaaaa cgcgccattg gacttcaaac
     7981 cgtaatcgcg atgttgactg ttcggacggt caacatcagg caccggttgc cacggggttc
     8041 tggtagtttt gtgtatttta gtttgttaac attctgctaa attatcgtgg gccatcggtc
     8101 cagataaggg agatatgatg aagcaggcat tacgagtagc atttggtttt ctcatactgt
     8161 gggcatcagt tctgcatgct gaagtccgca ttgtgatcga cagcggtgta gattccggtc
     8221 gtcctattgg tgttgttcct ttccagtggg cggggcctgg tgcggcacct gaagatattg
     8281 gcggcatcgt tgctgctgac ttgcgtaaca gcggtaaatt taatccgtta gatcgcgctc
     8341 gtctgccaca gcagccgggt agtgcgcagg aagtacaacc atctgcatgg tccgcactgg
     8401 gcattgacgc tgtagttgtc ggtcaggtca ctccgaatcc ggatggttct tacaatgttg
     8461 cttatcaact tgttgacact ggcggcgcac cgggtactgt acttgctcag aactcgtaca
     8521 aagtgaacaa gcagtggctg cgttatgctg gtcataccgc cagtgatgaa gtgtttgaaa
     8581 aactgaccgg cattaaaggt gcgttccgta cccgtattgc ctacgttgtt cagaccaacg
     8641 gcggtcagtt cccgtatgaa ctgcgcgtat ctgactatga cggttacaac cagtttgtcg
     8701 ttcaccgttc accgcagccg ctgatgtctc cggcgtggtc accagacggt tctaaactgg
     8761 cttatgtgac cttcgaaagc ggtcgttccg cgctggttat tcagacgctg gcaaatggcg
     8821 ctgtacgtca ggtggcttca ttcccgcgtc acaacggtgc acctgcattc tcgccagacg
     8881 gcagcaaact ggcattcgcc ttgtcgaaaa ccggtagtct gaacctgtac gtaatggatt
     8941 tggcttctgg tcagatccgc caggtgactg atggtcgcag taacaatacc gaaccgacct
     9001 ggttcccgga tagccagaac ctggtattta cttctgacca ggccggtcgt ccgcaggttt
     9061 ataaagtgaa tatcaacggc ggtgcgccac aacgtattac ctgggaaggt tcgcagaacc
     9121 aggatgcgga tgtcagcagc gacggtaaat ttatggtaat ggtcagctcc aatggtgggc
     9181 agcagcacat tgccaaacaa gatctggcaa cgggaggcgt acaagttctg tcgtccacgt
     9241 tcctggatga aacgccaagt ctggcaccta atggcactat ggtaatctac agctcttctc
     9301 aggggatggg atccgtgctg aatttggttt ctacagatgg gcgtttcaaa gcgcgtcttc
     9361 cggcaactga tggacaggtc aaattccctg cctggtcgcc gtatctgtga taataattaa
     9421 ttgaatagta aaggaatcat tgaaatgcaa ctgaacaaag tgctgaaagg gctgatgatt
     9481 gctctgcctg ttatggcaat tgcggcatgt tcttccaaca agaacgccag caatgacggc
     9541 agcgaaggca tgctgggtgc cggcactggt atggatgcga acggcggcaa cggcaacatg
     9601 tcttccgaag agcaggctcg tctgcaaatg caacagctgc agcagaacaa catcgtttac
     9661 ttcgatctgg acaagtacga tatccgttct gacttcgctc aaatgctgga tgcacatgca
     9721 aacttcctgc gtagcaaccc gtcttacaaa gtcaccgtag aaggtcacgc ggacgaacgt
     9781 ggtactccgg aatacaacat ctccctgggt gaacgtcgtg cgaacgccgt taagatgtac
     9841 ctgcagggta aaggcgtttc tgcagaccag atctccatcg tttcttacgg taaagaaaaa
     9901 cctgcagtac tgggtcatga cgaagcggca tactccaaaa accgtcgtgc ggtactggtt
     9961 tactaagaga attgcatgag cagtaacttc agacatcaac tattgagtct gtcgttactg
    10021 gttggtatag cggccccctg ggccgctttt gctcaggcac caatcagtag tgtcggctca
    10081 ggctcggtcg aagaccgcgt cactcaactt gagcgtattt ctaatgctca cagccagctt
    10141 ttaacccaac tccagcaaca actttctgat aatcaatccg atattgattc cctgcgtggt
    10201 cagattcagg aaaatcagta tcaactgaat caggtcgtgg agcggcaaaa gcagatcctg
    10261 ttgcagatcg acagcctcag cagcggtggt gcagcggcgc aatcaaccag cagcgatcaa
    10321 agcggtgcgg cggcatcaac gacgccgaca gctgatgctg gtactgcgaa tgctggcgcg
    10381 ccggtgaaaa gcggcgatgc aaacacggat tacaatgcag ctattgcgct ggtgcaggat
    10441 aaatcccgcc aggatgacgc aatggtggca tttcagaatt tcatcaaaaa ttaccctgat
    10501 tcaacttacc tgccaaacgc caattattgg ctgggtcagt taaactacaa caagggtaaa
    10561 aaagatgatg cggcgtacta ttttgcttcg gtagtgaaaa actatccgaa gtcaccaaag
    10621 gctgctgatg cgatgtttaa agtcggcgtc atcatgcagg acaaaggtga caccgcaaaa
    10681 gcgaaagccg tataccagca ggttatcagt aaataccctg gtactgatgg cgctaaacag
    10741 gcacaaaaac gtctgaacgc gatgtaatgc ataacacacg accagaagtt gcattatttc
    10801 tggtcgtgtc gtgcgaatca taagcagttg agtgatctgc atcgaaattt ttgttgcgct
    10861 caagtctgaa atcagtaata tatgccgccg ttgccacggg atatcaaaca aaccgaaagc
    10921 aacgaaaaa
//
LOCUS       DADKRT010000145        10904 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.147, whole genome shotgun sequence.
ACCESSION   DADKRT010000145 DADKRT010000000
VERSION     DADKRT010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10904
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.147"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            15..185
                     /locus_tag="JQ356_003184"
     CDS             15..185
                     /locus_tag="JQ356_003184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001429095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lycopene biosynthesis protein"
                     /protein_id="HAY4623190.1"
                     /translation="MLQEKEYPITIYNIAPFNKNLWSLLKSSQECPPGESKITNKCLH
                     NSCIIKICSICY"
     gene            complement(253..1503)
                     /gene="icd"
                     /locus_tag="JQ356_003185"
     CDS             complement(253..1503)
                     /gene="icd"
                     /locus_tag="JQ356_003185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HAY4623191.1"
                     /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
                     IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
                     FERLMEGAKLLKCSEFGEAIIENM"
     gene            1675..2328
                     /gene="rluE"
                     /locus_tag="JQ356_003186"
     CDS             1675..2328
                     /gene="rluE"
                     /locus_tag="JQ356_003186"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309634.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HAY4623192.1"
                     /translation="MRQFIISENTMQKTSFRNHLVKRFSSQRSTRRKPENQPTRVILF
                     NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG
                     KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER
                     KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYTLDNLANGEWREATE"
     gene            2338..2799
                     /gene="nudJ"
                     /locus_tag="JQ356_003187"
     CDS             2338..2799
                     /gene="nudJ"
                     /locus_tag="JQ356_003187"
                     /EC_number="3.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase NudJ"
                     /protein_id="HAY4623193.1"
                     /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
                     VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
                     CCRWVSAEEILKASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI"
     gene            2853..3959
                     /gene="mnmA"
                     /locus_tag="JQ356_003188"
     CDS             2853..3959
                     /gene="mnmA"
                     /locus_tag="JQ356_003188"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HAY4623194.1"
                     /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP
                     GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD
                     EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
     gene            3995..4636
                     /gene="hflD"
                     /locus_tag="JQ356_003189"
     CDS             3995..4636
                     /gene="hflD"
                     /locus_tag="JQ356_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HAY4623195.1"
                     /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
                     DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
                     PQVPAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
     gene            4640..6010
                     /gene="purB"
                     /locus_tag="JQ356_003190"
     CDS             4640..6010
                     /gene="purB"
                     /locus_tag="JQ356_003190"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HAY4623196.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKE
                     KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
                     YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
                     MVDELK"
     gene            6178..6849
                     /gene="phoP"
                     /locus_tag="JQ356_003191"
     CDS             6178..6849
                     /gene="phoP"
                     /locus_tag="JQ356_003191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HAY4623197.1"
                     /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
                     LFELR"
     gene            6849..8309
                     /gene="phoQ"
                     /locus_tag="JQ356_003192"
     CDS             6849..8309
                     /gene="phoQ"
                     /locus_tag="JQ356_003192"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HAY4623198.1"
                     /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
                     PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
                     VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
                     RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
                     RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
                     YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
                     EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
     gene            8385..9506
                     /locus_tag="JQ356_003193"
     CDS             8385..9506
                     /locus_tag="JQ356_003193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309600.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HAY4623199.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA
                     MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
                     LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD
                     ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(9555..10781)
                     /gene="pepT"
                     /locus_tag="JQ356_003194"
     CDS             complement(9555..10781)
                     /gene="pepT"
                     /locus_tag="JQ356_003194"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HAY4623200.1"
                     /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
                     MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
                     PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLAGMKGTVERADMH
                     YIIRDFDRKQFEARKCKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
                     IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTAQRK"
BASE COUNT         2695 a         2788 c         2727 g         2694 t
ORIGIN      
        1 ttaagcttgg tattatcctt caggaaaaag aatatcctat tactatttat aacattgcac
       61 cattcaacaa gaatttatgg agtttactca aaagcagtca agagtgtcct ccaggagaaa
      121 gcaaaataac aaataaatgt ttacataata gttgcattat aaaaatatgc tcgatatgct
      181 attaataata tccacataaa taaaacaacg ggcgtgttat acgcccgttt caatatttaa
      241 ctcatggaga gattacatgt tttcgatgat cgcttcacca aactctgaac atttcagcag
      301 cttagcgcct tccatcagac gttcaaagtc ataagttacg gttttcgcgt tgatagcacc
      361 ttccatacct ttaacaatta aatcagccgc ttcagtccac cccatatggc gcagcatcat
      421 ctcagcggag aggatgatag agcctggatt tactttgtcc tgaccggcgt atttcggcgc
      481 agtaccgtgg gtggcttcaa acagggcgca ttcgtcaccg atgtttgctc caggagcgat
      541 accgataccg ccaacctgcg ctgccagggc gtcagaaatg tagtcaccgt tcaggttcat
      601 acaggcgata acatcatatt cagccggacg cagcaggatc tgttgcagga atgcatcagc
      661 aatcacgtct ttaatgacga tctctttgcc ggtgttcggg tttttaactt tcagccacgg
      721 gccgccgtcg atcagttcac cgccaaactc ttcacgcgcc agctggtagc cccagtcttt
      781 aaacgcgcct tcggtgaact tcatgatgtt gcctttgtgc accagagtca cagagtcacg
      841 atcgttagca attgcgtatt cgatcgctgc acgaaccaga cgtttggtgc cttcttccga
      901 acacggctta ataccgatac cacaatgttc cgggaagcga attttcttca cccccatctc
      961 ttcacgcagg aatttaatca ctttctcggc gtcggcagag tctgctttcc attcgatacc
     1021 cgcataaatg tcttccgagt tttcacggaa gataaccata tcggtcagtt cagggtgttt
     1081 aaccgggctt ggagtgccct gatagtaacg taccggacgc aggcagatgt agagatccag
     1141 ttcctggcgc agggcaacgt tcagagagcg aataccgcca ccaacaggag tggtcagcgg
     1201 acctttaatg gcaacgcgat attcacgaat cagatcaagg gtttcagcag gcagccagac
     1261 atcctgacca taaacctgtg tggatttttc accggtgtaa atttccatcc aggagatttt
     1321 acgctcgcct ttataggctt tctcgactgc agcgtcgacc actttcagca tggctggggt
     1381 tacatctaca ccgattccat caccttcaat gtaagggata atcggatttt caggaacgtt
     1441 gagtttgccg ttttgcaggg tgatcttctt gccttgtgcc ggaacaacta ctttactttc
     1501 cattcacctc tccttcgagc gctactggtt tgctcgtctg ccaccacgtt gcatatgcgt
     1561 ttgcgtcctg cgatacggat gctttagagc aattttttgt taatgatttg taattggctt
     1621 gtcaatacta ccctattgtt tgccgtcatg aaagatgcgc gttattaggc tataatgcgg
     1681 caattcataa tctctgaaaa taccatgcaa aaaacttctt ttagaaatca cctggttaag
     1741 cgattcagct cgcaacgttc taccaggcgt aaacctgaaa accagcccac gcgtgtgatc
     1801 ctgttcaata aaccctacga tgttcttccg cagttcaccg atgaagccgg acgcaaaaca
     1861 ttaaaagaat tcatcccggt tcagggcgtt tatgcagcag gtcgtcttga ccgcgatagc
     1921 gaagggttac tggtgctgac caataacggc gcgttgcagg cgcgtttaac ccagccgggc
     1981 aaacgcaccg ggaaaatcta ttatgtgcag gtggaaggta ttcccacaca agacgcactt
     2041 gaagccttgc gcaatggcgt aaccttaaat gatggcccta ccctgcccgc cggcgcggag
     2101 ctggttgacg aaccagcgtg gttatggccg cggaatccac caattcgtga acgcaaaagt
     2161 attcccacca gctggctgaa gatcacctta tatgaaggac gtaatcgcca ggtgcgccgc
     2221 atgaccgccc atgttggttt ccccacgctg cgactgattc gttatgcgat gggtgattac
     2281 actttggata accttgccaa tggcgaatgg cgagaagcaa cagaataagg atgcacaatg
     2341 tttaaaccac acgttaccgt tgcttgcgta gtgcacgcag agggtaaatt tttagtcgtt
     2401 gaagagacga ttaatggtaa agcgttatgg aaccaacctg ccgggcatct ggaagccgat
     2461 gaaaccttag tggaagctgc cgcccgtgag ctatgggaag aaaccggcat cagcgcgcaa
     2521 ccgcaacact ttattcgtat gcatcagtgg attgcgccag ataaaacgcc gtttttgcgt
     2581 ttcctctttg ccattgagct tgagcaaata tgcccgaccc agcctcatga cagcgatatc
     2641 gactgctgtc gttgggtcag cgccgaagaa attttaaagg cgtcaaatct tcgttcgccg
     2701 ctggtggcgg aaagtatccg ttgttatcaa agcgggcaac gctatccgct ggagatgatt
     2761 ggcgatttta actggccttt tacaaagggt gtcatctaaa aggctgcgtg atagaatacg
     2821 ccgccttgaa gttcaatgtc gtgagtgatc caatgtctga aaccgcaaaa aaagtaatcg
     2881 tcggcatgtc cggcggtgtc gattcctccg tttctgcctg gctgttgcaa caacagggat
     2941 atcaggttga aggcctgttt atgaagaact gggaagaaga cgacggtgag gaatattgca
     3001 cagcggcagc ggatctggct gatgcccaag ctgtctgcga caagctcggc attgaactgc
     3061 acaccgttaa ctttgctgcc gagtactggg acaacgtctt cgaactgttc cttgccgaat
     3121 ataaagccgg tcgcacgccg aatccggata ttctgtgcaa caaagagatc aaatttaaag
     3181 ctttcctcga atttgccgcc gaagatttag gtgccgatta tatcgctacc ggtcattacg
     3241 tacgtcgggc cgatgtcgat ggcaagagcc gcctgctgcg tggtctggac agcaataaag
     3301 accagagcta cttcctttat acgctcagcc atgagcagat tgcgcaaagc ctgttcccgg
     3361 tcggcgaact ggaaaaaccg caggtgcgta agattgctga agatcttggt ctggtcaccg
     3421 cgaagaaaaa agactctacc ggcatttgct tcattggcga acgtaaattc cgcgagttcc
     3481 tgggccgtta tctcccggcg caaccgggca aaatcattac cgtcgatggc gatgaaattg
     3541 gtgagcacca ggggctgatg tatcacactc tcggtcagcg taaaggtctg ggtatcggtg
     3601 gcaccaaaga aggcaccgaa gaaccgtggt atgtggtgga caaagacgtc gaaaacaaca
     3661 ttctggttgt tgcgcagggc catgaacacc cgcggctgat gtctgtcggg ttgattgccc
     3721 agcagttgca ctgggtcgat cgcgaaccat tcaccggtac tatgcgttgc acggtaaaaa
     3781 cccgctatcg ccagaccgat atcccttgca ccgtcaaggc gctggacgat gatcgcattg
     3841 aagtgatttt cgatgaaccg gttgccgccg tgacgccggg ccagtctgcc gtcttctata
     3901 acggtgaagt gtgcctcggt ggcggtatta ttgagcagcg tctgccgctg ccggtctgat
     3961 tattatcttt acttaaaaca aggaagcagt gaacgtggca aagaattact atgacatcac
     4021 cctcgccctg gccggtattt gtcagtcggc acgcctggtg caacaactcg ctcaccaggg
     4081 gcattgtgat gccgatgcgc tacacgtctc actcaacagt attattgata tgaaccccag
     4141 ctcgacgctg gcggtttttg gcggtagcga agccaacctg cgcgtcgggc tggaaaccct
     4201 gctcggcgtg ctcaatgcca gcagtcgcca gggcttaaac gccgaattaa cccgctacac
     4261 actcagcttg atggtgcttg agcgcaaact ctcctcagcg aaaggcgcgc tcgacactct
     4321 gggcaaccgg atcaacggcc tgcaacgcca gctcgaacac ttcgatttac agtccgaaac
     4381 gctgatgagc gcgatggctg ctatctatgt tgatgtgatc agcccgcttg gcccgcgcat
     4441 tcaggtcacc ggttcccctg ctgtactgca aagcccacaa gtgccggcga aagttcgcgc
     4501 aaccctgctg gcaggcattc gcgccgccgt gctctggcac caggtcggcg gcggacgtct
     4561 gcaactgatg ttttctcgta atcgcctgac cactcaggca aaacaaattc ttgctcattt
     4621 aaccccggag ttgtgatcta tggaattatc ctcactgacc gccgtttccc ctgtcgatgg
     4681 acgctacggc gataaagtca gcgcgctgcg cgggattttc agcgaatatg gtttgctgaa
     4741 attccgtgta caagttgaag tacgttggct gcaaaaactg gccgcgcacg cagcgatcaa
     4801 ggaagttcct gcttttgctg ccgacgcaat cggttacctt gatgcaattg tcgccaattt
     4861 cagcgaagaa gatgccgcac gcatcaaaac catcgagcgt accactaacc acgacgttaa
     4921 agcggttgag tatttcctga aagaaaaagt ggcggagatc ccggaactgc acgcggtttc
     4981 tgaattcatc cactttgcct gtacttcgga agatatcaat aacctctccc acgcattaat
     5041 gctgaaaacc gcgcgtgatg aagtgatcct gccgtactgg cgtcaactga ttgatggcat
     5101 taaagatctc gccgttcagt accgcgatat cccgctgctg tctcgtaccc acggtcagcc
     5161 agccacgccg tcaaccatcg gtaaagagat ggcaaacgtc gcctaccgta tggagcgcca
     5221 gtaccgccag cttaaccagg tggagatcct cggcaaaatc aacggcgcgg tcggtaacta
     5281 taacgcccac atcgccgctt acccggaagt tgactggcat cagttcagcg aagagttcgt
     5341 cacctcgctg ggtattcagt ggaacccgta cactacccag attgaaccgc acgactacat
     5401 tgccgaactg tttgattgcg ttgcgcgctt caacaccatt ctgatcgact ttgaccgtga
     5461 cgtctggggt tatatcgccc ttaaccactt caaacagaaa accattgctg gtgagattgg
     5521 ttcttccacc atgccgcata aagttaaccc gatcgacttc gagaactccg aagggaatct
     5581 gggcctttcc aacgcggtat tacagcatct ggcaagcaaa ctgccggttt cccgctggca
     5641 gcgtgacctg accgactcca ccgtgctgcg taacctcggc gtgggtatcg gttatgcgct
     5701 gattgcgtat caatccaccc tgaaaggcgt gagcaaactg gaagtgaacc gtgaccatct
     5761 gctggatgag ctggatcaca actgggaagt gctggctgag ccaatccaga cagttatgcg
     5821 tcgctatggc atcgaaaaac cgtacgagaa gctgaaagag ctgactcgtg gtaagcgcgt
     5881 tgacgccgaa ggcatgaagc agtttatcga cggtctggcg ttgccagaag aagagaaagc
     5941 ccgcctgaaa gcgatgacgc cggcaaacta cattggtcgc gccatcacca tggttgatga
     6001 gctgaaataa actcgtatca gtgccggatg gcgatgctgt ccggcctgct tattaagatt
     6061 atccgctttt tattttttca ctttacctcc cctccccgct ggtttattta atgtttaccc
     6121 ccataaccac ataatcgcgt tacactattt taataattaa gacagggaga aataaaaatg
     6181 cgcgtactgg ttgttgaaga caatgcgttg ttacgtcacc accttaaagt tcagattcag
     6241 gatgctggtc atcaggtcga tgatgcagaa gatgccaaag aagccgatta ttatctcaat
     6301 gaacatttac cggatattgc gattgtcgat ctcggattgc cagacgagga cggtctgtca
     6361 ctgattcgcc gctggcgtag caatgatgtt tcactgccga ttctggtatt aaccgcccgt
     6421 gaaagctggc aggacaaagt cgaagtatta agtgctggtg ctgatgatta cgtgactaaa
     6481 ccatttcata ttgaagaggt gatggcgcga atgcaggcat taatgcggcg taatagcggt
     6541 ctggcttcac aggtcatttc gctacctccg tttcaggttg atctctctcg ccgtgaatta
     6601 tctattaatg acgaagtgat caaactgacc gcgttcgaat acaccattat ggaaacgttg
     6661 atacgcaata atggcaaagt ggtgagcaaa gattcgttaa tgctccaact ctatccggat
     6721 gcggagctgc gggaaagcca taccattgat gtactgatgg gacgtctgcg caaaaaaatt
     6781 caggcacaat atccgcaaga agtgattact accgttcgcg gccagggcta tttgttcgaa
     6841 ttgcgctgat gaaaaaatta ctgcgtcttt ttttcccgct ctcgctgcgg gtacgttttc
     6901 tgttggcaac ggctgcggta gtactggtgc tttcgcttgc ctacggaatg gtcgcgctga
     6961 tcggttatag cgtcagtttc gataaaacta cgtttcggct gttacgtggc gagagcaatc
     7021 tgttctatac ccttgcgaag tgggaaaaca ataagttgca tgtcgagtta cccgaaaata
     7081 tcgacaagca aagccccacc atgacgctaa tttatgatga gaacgggcag cttttatggg
     7141 cgcaacgtga cgtgccctgg ctgatgaaga tgatccagcc tgactggctg aaatcgaatg
     7201 gttttcatga aattgaagcg gatgttaacg ataccagcct cttgctgagt ggagatcatt
     7261 cgatacagca acagttgcag gaagtgcggg aagatgatga cgacgcggag atgacccact
     7321 cggtggcagt aaacgtctac ccggcaacat cgcggatgcc aaaattaacc attgtggtgg
     7381 tggataccat tccggtggag ctaaaaagtt cctatatggt ctggagctgg tttatctatg
     7441 tgctctcagc caatctgctg ttagtgatcc cgctgctgtg ggtcgccgcc tggtggagtt
     7501 tacgccccat cgaagccctg gcaaaagaag tccgcgaact ggaagaacat aaccgcgaat
     7561 tgctcaatcc agccacaacg cgagaactga ccagtctggt acgaaacctg aaccgattgt
     7621 taaaaagtga acgcgaacgt tacgacaaat accgtacgac gctcaccgac ctgacccata
     7681 gtctgaaaac gccactggcg gtgctgcaaa gtacgctgcg ttctctgcgt agtgaaaaga
     7741 tgagcgtcag tgatgctgag ccggtaatgc tggagcaaat cagccgcatt tcacagcaaa
     7801 ttggctacta cctgcatcgt gccagtatgc gcggcgggac attgctcagc cgcgagctgc
     7861 atccggtcgc cccactgctg gacaatctca cctcagcgct gaacaaagtg tatcaacgca
     7921 aaggggtcaa tatctctctc gatatttcgc cagagatcag ctttgtcggt gagcagaacg
     7981 attttgtcga ggtgatgggc aacgtgctgg ataatgcctg taaatattgc ctcgagtttg
     8041 tcgaaatttc tgcaaggcaa accgacgagc atctctatat tgtggtcgag gatgatggcc
     8101 ccggtattcc attaagcaag cgagaggtca ttttcgaccg tggtcaacgg gttgatactt
     8161 tacgccctgg gcaaggtgta gggctggcgg tagcccgcga aatcaccgag caatatgagg
     8221 gtaaaatcgt cgccggagag agcatgctgg gcggtgcgcg gatggaggtg atttttggtc
     8281 gccagcattc tgcgccgaaa gatgaataaa tatgtccata cttcacgcat tacgttaagc
     8341 atccgttata atcggttgca gataccagcc tgtggatgct taacatggaa taccaactca
     8401 ctcttaactg gcccgatttt cttgaacgtc actggcagaa acgcccggtg gtgttaaaac
     8461 gcggctttaa taattttatt gacccgatct ctccagacga gttggcgggt ctggcgatgg
     8521 aaagcgaagt tgacagtcga ctggtcagtc accaggatgg caaatggcag gtcagccacg
     8581 gcccgttcga aagctacgat catctcggtg aaaccaactg gtcattactg gtacaggcag
     8641 tgaaccactg gcatgagccg accgccgcgc tgatgcgacc gttccgtgaa ctaccggact
     8701 ggcgtattga tgatctgatg atttcttttt ctgtacctgg cggcggcgtc ggcccgcatc
     8761 tcgatcagta cgacgtgttt atcattcagg gtaccggacg tcgtcgctgg cgagtgggcg
     8821 aaaagctgca aatgaaacag cactgcccac atccggatct gttacaggtc gatccgttcg
     8881 aagccatcat cgatgaagag ctggagcctg gtgatattct ttatattccg ccaggattcc
     8941 cgcatgaagg ctacgcgctg gaaaatgcga tgaactattc cgtgggcttt cgcgcgccaa
     9001 atacgcggga actgattagt ggatttgccg attatgtgct gcaacgtgaa ctgggcggca
     9061 actactacag cgatcctgat gttccacctc gcgctcatcc tgcggatgtt ctgcctcaag
     9121 agatggataa actgcgtgag atgatgctcg aattgatcaa ccagccggaa cactttaagc
     9181 aatggtttgg cgagtttata tcccagtcac gtcatgaact ggatatcgcg ccgccggaac
     9241 cgccttatca gccagatgaa atctacgatg cgctgaaaca aggtgatgtg ctggtgcgcc
     9301 tgggtggtct gcgcgtattg cgcattggcg acgacgtgta tgccaatggt gagaagatcg
     9361 attccccgca ccgtccggca ctggatgcac tcgccagcaa cattgcgctg actgcggaga
     9421 attttggcga tgcgctggaa gatccgtcat tcctcgcgat gctcgcggcg ctggtcaata
     9481 gcgggtattg gttcttcgaa gggtaagttt ggatttaagc cggatgcggc atcacatgcc
     9541 gcatcccttt tcgcttactt ccgttgcgcc gttaactcgg caatacggac gatcacctgc
     9601 accgcttttt ccataccttc cagagtcaca aactcatgct taccatgata gttgtaaccg
     9661 ccagtgaaca agttcgggca cggtaatccc ataaacgaca actgcgcgcc gtcggtaccg
     9721 ccgcggatcg gtttcagttc cggttcaata tcgcagtcac gcattgcctg ctgggcgata
     9781 tcgagaatat gcggatgctc aaccactttc tcgcgcatat tgtagtaact gtcttcaatc
     9841 accagttcaa tgtagcaatc aggatgtaac cctttgccca cttttttggc gatctccatc
     9901 attttacatt tacgcgcttc aaactgttta cggtcgaaat cacggatgat gtagtgcata
     9961 tcggcccgtt caacggtgcc tttcatgccc gccaggtgat agaaaccttc atagccttct
    10021 gtcatttccg ggctttcatc cgccggaact tccgcatgaa tacgtgccgc cagcgacagc
    10081 gcatttacca tcactccttt cgccgtgccc ggatgaacat tgttaccgac aattttgata
    10141 ttgaccgatg cggcgttgaa gttttcaaac tccagttcgc ctacgccacc accgtcaaca
    10201 gtgtaagccc agcgggcatc gaaggcatca acatcaaaat gtttcgcccc tttgcccact
    10261 tcttcatccg gggtaaaggc gacgcgaata tcaccatgcg gaatgttttt ctgttgcaat
    10321 accgccagcg cggtcatgat ttctgcaata cctgctttgt catcggcacc taacaaggtt
    10381 ttaccatcgg tggtaatcaa tgtctgaccc agtagctgat gcagcaccgg gaacataacc
    10441 ggtgataaaa cttcatcgcc gatacccagc gcaatatcgc caccgcgata gttttcaaca
    10501 atttgcggat taacattttt gccgctgcaa tccggtgagg tatccacatg agaaataaag
    10561 ccaatcgccg ggatatcgcc agggacgtta gccggtaacg tcgccatcaa agtgcccttc
    10621 tcacttaagg tcacattgat aagccccatt tcttcgagct gctctttcag cagatgcaat
    10681 aacttccatt ggccttccgt gctgggaacc tgtctcaccc ctgcttttga ttgggtatcc
    10741 agagacacgt agttcaaaaa tcgctcaagt agtttatcca tgtagtcacc ctcacttttt
    10801 gtgacaacat tattaagaag caagaaaaga caaatattgc gtcaggtcac ttttacccct
    10861 gcaagcggga atatttatca gcattacctt aatgaatata aagc
//
LOCUS       DADKRT010000146        10897 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.148, whole genome shotgun sequence.
ACCESSION   DADKRT010000146 DADKRT010000000
VERSION     DADKRT010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10897
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.148"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(228..2087)
                     /gene="gss"
                     /locus_tag="JQ356_003195"
     CDS             complement(228..2087)
                     /gene="gss"
                     /locus_tag="JQ356_003195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HAY4623201.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
                     RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
                     AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
                     WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN
                     KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
                     ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
                     SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
                     NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
                     IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
                     PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
                     YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK"
     gene            2292..3158
                     /gene="yghU"
                     /locus_tag="JQ356_003196"
     CDS             2292..3158
                     /gene="yghU"
                     /locus_tag="JQ356_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HAY4623202.1"
                     /translation="MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP
                     ALRDHTHNPPICVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG
                     FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGN
                     VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS
                     DFETNTEDKRQG"
     gene            complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JQ356_003197"
     CDS             complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JQ356_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HAY4623203.1"
                     /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
                     LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
     gene            complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JQ356_003198"
     CDS             complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JQ356_003198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY4623204.1"
                     /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
                     RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG
                     DSLIVKSIEVE"
     gene            complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JQ356_003199"
     CDS             complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JQ356_003199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HAY4623205.1"
                     /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
                     FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
                     SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE
                     NA"
     gene            complement(4357..4851)
                     /locus_tag="JQ356_003200"
     CDS             complement(4357..4851)
                     /locus_tag="JQ356_003200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HAY4623206.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
                     AIHD"
     gene            complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JQ356_003201"
     CDS             complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JQ356_003201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HAY4623207.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
                     AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG
                     KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
                     STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
                     GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JQ356_003202"
     CDS             complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JQ356_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HAY4623208.1"
                     /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLKRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
                     IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS
                     LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
                     VAFNPGGGYAYFPTREELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JQ356_003203"
     CDS             complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JQ356_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HAY4623209.1"
                     /translation="MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
                     LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
     gene            complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JQ356_003204"
     CDS             complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JQ356_003204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HAY4623210.1"
                     /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
                     GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            complement(10015..10302)
                     /locus_tag="JQ356_003205"
     CDS             complement(10015..10302)
                     /locus_tag="JQ356_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HAY4623211.1"
                     /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
     gene            complement(10421..10897)
                     /locus_tag="JQ356_003206"
                     /pseudo
     CDS             complement(10421..10897)
                     /locus_tag="JQ356_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
BASE COUNT         2659 a         2990 c         2692 g         2556 t
ORIGIN      
        1 caaagtgaaa tatcattttt taacgataaa aagagtgtta tttcttgtgt atcagacaat
       61 aagcattcat tcaaaacctt tagaaataat caaaacacag gtattccact ggttaatata
      121 ttcacatatg aaatgaataa atattagaac atataaatat tgaatatttt gattaatccc
      181 cgtactgatt attcttcata atcagtacgg ggttgctaca acatgtatta ctttttcacc
      241 acaattaacg gttcaatatc actctctttt ttgatgacca gtgattcatc accgcgcaaa
      301 cacgtcccac cgtagttgcc gcccacggtg aaggtacata cctgaatgta tttaccgtcc
      361 actttcggca aacaccacag ttgctgatag atgtttttct gctcggcaaa tttaccgctg
      421 gttttgtcca gcacctcttc atgatggctg accaggtcga tattgctacc acagcgaccg
      481 gcaatcggtt tcactgcgta acctgttttc accaattcat cattaacagt gaaatcggta
      541 tccagcaggt aacgatggtg cgggaacagc gaccagagga tcggcagaat cgctttgttg
      601 ccggggatca ccgtccacag cggctcaaag actagcactt ccgggcgcag caatacgtcg
      661 ataagacgca cttcgttttg cggatgaccg gtacggattg gcaccgcagc aaactcacgg
      721 tcgctaactt cacgaatctg atcaaacgcg gtttcccacg cccaggtttt ccacacgcag
      781 ttaaccagtc gcccttcccc atcaatcagt tgcccggcag catcccagcc cagttcatcc
      841 aatccacgca agatacgcgt ttcaaagccc gcctggtgca gcgcctgctc cataaactgc
      901 gcgtgatagt tttcctcgat atctttgtcc tgcatgatat ggacaaacgg acgtgcacga
      961 ctgtgtttcc aggcaccagc caattcgtta atcagccctt ccgccggatt gaagccgttg
     1021 cctttatagc cctgctccgc ccaacgttcg aggatcaagc ccgcttcggt atgacaggag
     1081 gcggagtcgg cgttgtactc gtaaaccttc aggccacgct catccatgca gaaatccata
     1141 cgaccagtga tcatatggtg acggcgacgc tgccaggaga gacgcaaacg tggccagagg
     1201 attttcggaa tgtcgaacag cgccagcagg ttgtcatctt tcagtacctt gtcggttgcg
     1261 tgaagataca tcaggtgcag ctcgttggtg gctttaatta gctcctgctc ggcactctcg
     1321 gtaatggtgt agtaatgata aggatcctga ttgatcacct gaccgttggc ctgcacatag
     1381 gcgttttgca gcggatcttt ttcatccagc catttaccgt caaactggcc tttgttttcc
     1441 aggcgcgctc cgctgatttt cagcagctcg cctgcaattt ccggctgcgg taagctgtat
     1501 tcagtatctt ccgtctggat catccagccc agaatggtgg tgtcatcaaa agtgtctttc
     1561 agggtatagc agccgttttc gaccaccatc tccagctcac gcgtccactg ttgcccttgc
     1621 ggcaacgggg aatgaatcac gttctgttcc gcaatacgga ctttgttgcc atgcaattgg
     1681 gtaatgatgg cgacatggcc agtgtcttta aattcaccgc ctttatccca gataagaagc
     1741 gcacccgcga ccggcgcacg cggcgagccg ttaggaaatg cctgcaatgg caggatgttg
     1801 tcattaacca cttctcgcag gaagcgcagc gagaaaatct cccacgccat acccacgtca
     1861 gtaaagacca caccgtaatt cagaaagaga aaacggcgag caaattcaac gcattgccac
     1921 ttgtggccca tatattcgtc gtcgatatag ctacggaata cggcgtcatc ttcgtattcc
     1981 tgcggatcga gagaactgta atctgaagag tagattgcta ccccacctgg ggcgtagccc
     2041 aataatgtcc cgaacggggc atcctggctg gtcgttcctt tgctcatcac tttaccttta
     2101 acaatacaac ctaagcagtt ggcgtaattg ttgtgctctg attacctgct cagcgacatt
     2161 aaccggacag aggtcagact aatcatacac ctcatcgcag cggctggcgc aaagggttaa
     2221 aaaattcaca ttctgtacag caagtgacct gccacactgc ttcaacacta ccactcagaa
     2281 ggcaactcac tatgacagac aatacttatc agcccgcgaa agtctggacg tgggataaat
     2341 ccgctggcgg cgcgttcgcc aatatcaatc gcccggtttc tggtccgacg catgaaaaaa
     2401 cgctgcccgt tggcaaacac ccattgcaac tttattcgct gggaacgccg aacggtcaga
     2461 aagtaacgat tatgcttgag gagctgctgg cgctgggcgt tactggtgca gagtacgacg
     2521 cctggctgat tcgtattggc gatggcgatc aattctccag cggctttgtc gaagtgaacc
     2581 caaactcgaa gatcccggcg ctgcgcgatc atacgcataa tccgccgatc tgtgtgtttg
     2641 aatctggttc gatcctgctt tatctggcgg agaaatttgg ctacttcctg ccgcaggatt
     2701 tggcaaagcg tactgaaacg atgaactggc tgttctggtt acagggcgcg gcaccgttcc
     2761 tcggcggtgg ttttggtcac ttttaccatt acgcaccggt aaagattgag tacgccatca
     2821 accgctttac catggaagcc aaacgtctgc tcgacgtgct ggataagcaa ctggcgcagc
     2881 ataagtttgt tgcgggcgat gagtacacca ttgcggatat ggcgatttgg ccgtggtttg
     2941 gcaacgtggt gttaggtggt gtgtatgatg ccgctgagtt tcttgatgcg ggcagttata
     3001 agcatgtaca acgctgggcg aaagaagtag gcgaacgtcc ggcggtgaaa cgtgggcgta
     3061 ttgttaaccg caccaacgga ccgctgaatg agcagttgca tgagcgccat gacgccagtg
     3121 atttcgagac gaatacggaa gataagcgtc aggggtaagg gttggtgttc gtcgcagcaa
     3181 gccatccagg ccggataagg cgttcacgcc gcatccggca atcgtgcaca atgcctgatg
     3241 cgacgctgcc gcgtcttatc aggcctacga aagctaatca tcacgcgctg gtaatgtcgt
     3301 aatccatttg gcgcagtgcg tctaatgtgg ctttggcttc atcttcgtcg atgatgctca
     3361 tggcaaatcc gacgtgtacc agcacccact ggcccagtag atcggcaggg ttaccttcac
     3421 aaatcagggc gatattcacg tcgcgcttga taccacatac ttcaacctgc gcaagctggt
     3481 gaatatcttc accgacagcc agcacctggc ctggaacgcc aatacacatt attaactccg
     3541 gttattcaac ttcaatactt ttgacgatca gcgaatcgcc ggtatcgaca cgcaaccgct
     3601 cgccgtgaca gagcggacac tgcgcatcgt gctgatgaat ctccaccacc tggctgcaat
     3661 cccagcacca ggcctgggcg ggtttataga cgatatgtaa atcgcaccct tgcgccaccg
     3721 ttccgtggca gacaatttca aaactaaaac ggacggcgct ctcctcaacg caggagagcg
     3781 cgccaatttc cagccacacg gcggtgacgc gcttaacatc gtgctgctcc gcctgccgtt
     3841 ggataatttc aacggcgctc tggcaaagcg acaactcatg cattttcgcc actcctgcga
     3901 ccaaacagca gggcgcgacg ccctgcgtgt ggtacatccg gattcgtgac tggcagcgaa
     3961 aggatcattc gtgcgcagtc atccgtcagg cgttggccct cttcaatcga catactgtgc
     4021 gaaagcggtg acatcagcga acaggagagg tattgcgaaa caccgtccag ttcgccaacg
     4081 gtaaaggtca tggtgccata cggcagttgc agaccaattt tttcactcac tttgcgcagc
     4141 ggccagagtt gatccgggcc ggggaagata actgcactca gcatccacgg ggtgatcaca
     4201 caccccgtcc actgaccttc gaacagcgta aaatcagaaa catacaccgg cattgaagga
     4261 tgcagaaaag agagatcgtg catcgaacgc cgggcaattt cttcaaacgc tgcctgtact
     4321 tgcgccttcg gggaggtctg gaaacctgct atctcttcag tcatgaatcg cctcccgtgg
     4381 gatggcttcc acgcctgatt cgcgcagcgc agccagaacc tgctcaagcg caggttcaat
     4441 cattgcttca accgtcggcg ttaagccgat gtgtggctcc agcgattccg ggatcacgcc
     4501 gaccagggtc agctttttcg gaaactcacc ggtgaagcgc agggccgaca atacgtcggc
     4561 caggccaagc tgatgcggag agattttgtt ggtaaacaac gccggaactt cttcatcccg
     4621 caggatcatc atcgttcccg gcgtgttctt tttcgacaca atggcatccg caataatcag
     4681 atgatcgcga tttgccatgt cgccaagcag ctccattccc gccgtgccgc catcgaggat
     4741 ctcaacataa tccggcagaa tgtatcgttg ctctaacgct tcgacaatcc gcacaccgat
     4801 ggcttcatcg gtcagcaaaa tattgccgac ccctaagact aaaatacgca ttacagaacc
     4861 ttcactgaaa ccacttcgtt gccgtcggca tccactacgt gtaccgcaca ggccatgcac
     4921 gggtcgaagg agtgaatggt acgcaccact tccagcggtt tattcggatc agcaaccggt
     4981 gtacccacca gcgactgctc gtaaggaccg acgtcatcat tgaagttacg cggaccagag
     5041 ttccaggttg atggaacaac tgcctggtag ttactgataa taccgtcttt aataaccatc
     5101 cagtgagaga gcataccgcg cggcgcttcg aggaagccaa cacctttgaa ctcacccgtt
     5161 gccggaatgt tcggtttcac aaaggtggtg tgatcgcctt tgccgatatt ggtgatcagt
     5221 gcactgtatt gattttgcag gatatcctgc aattcgcagc agtgaacggt acgaccaata
     5281 atacggccca gcgtggagtg cagctgcgcc acttccagcg tgttgccagt cagtttctga
     5341 taaatcgcaa cgatttcatt cagtttgttc tgggtagatt cgcgacctgc cgccagtttc
     5401 accagcatat tagccagcgg acccacttct accgttttgc cgtagaaagt cggtgatttc
     5461 acccaggaat atttcccgtc gtcagaccaa ccatcataag ccggaatggt ggtaccttcc
     5521 cacggtgcct gcggcgcttc gtctttatac caggagtgct tcgcgctttc ctgaatgcct
     5581 ttgatcaggt attcatcgga atgagaagtg atcggacgat acgaggacag atccgcattc
     5641 tcaatgtagc cgcccgggaa caggaagctg ccgtttttac tgtcggtcgg gaattccggc
     5701 acgctcaggt agttcaccgc acctttaccg cgcgtcagcc attccgggta gaacgcggca
     5761 ataactgcgg tatcaacctt ataaacctgt tcaacaaagt cgctcagctt gtcgatgaaa
     5821 gacttgatgt acatcaggcg ctcaaggttc agcacgccca aaccgtcgag gttgatcggg
     5881 ttcgcgacac cacctaccgc caggttctga atgtgcggcg ttttaccgcc cagcagcgcc
     5941 acgacgcggt tagcgtcacg ctggcactcc agcgcctgca ggtagtgcgc taccgcaatc
     6001 aggttcactt ccggcggcag tttcatcgcc gggtgacccc agtagccatt ggcgaaaata
     6061 cccaactgac cgctggcaac cagatctttg atcttgttct gaactttagt gaactcttcc
     6121 ggactgttca gatgccaggt cgaaacgcct ttcagcattt cggaggcttt ggttgggtca
     6181 gcttgcagtg cagaagtgat gtccacccag tccagcgccg aaagctgata gaaatgaacg
     6241 atatggtcat gcgtggtgtg cgcagccaga atgatgttac ggatgtattg cgcgttaacc
     6301 ggaacgtcga tattcagcgc actttctgcc gcacgaacgg aagacagcgc gtgagtggta
     6361 gtacatacgc cacagatacg ttgcacaatc atccatgcat cgcgcggatc gcggtttttc
     6421 acgatctctt ccatgccgcg ccacatggta ccggaagccc atgctttcga aacgacgcca
     6481 ttttcgattt cgcaatcgat gcgtaaatgc ccctcaatac gggttaccgg atcaatagta
     6541 attctctggc tcatgctttg ctcgcctcat gacgattatg atcgttttgt tttaaaggag
     6601 gaagtatcgg cagtagacga atgagtacga tgtaagcgca aatctcaata gccacaaaac
     6661 caatagaaat caacagttct tccctggtcg ggaagtaggc gtaaccgccg cccgggttga
     6721 atgccaccag cgaataggtc agacgccagg ttgcacaacc taacagtgcg ctcagtgctg
     6781 acaggaacag catgcgggaa tcattacgca gcttcgccac acgcagaacg accagcggga
     6841 agagcatcag caggacttca atccagaaca tcacggagta gaagtcaccg gcaaacgcta
     6901 acgacagctt gtcgcgatag ataagctcgc caaagcgcag cacgataaaa atcgccagca
     6961 acacactgat ggtgttggtc agcttgacga acagactctt ttcatccgga ccgttgccac
     7021 gcagacccgc ctgcaccagc gaaccttcaa agatgacaat cgagaagccc atgatgaacg
     7081 ccgtcagcag cgagaacagc ggcaacattt catagctctg ccacaacgga tgcaccttgt
     7141 agcccgccga gatcatcagt gaccccattg aagactggtg catggtcggc aacagcgcgc
     7201 caagtgcaat gatgaagaac atcaccttgt tcagacgctt gagagaaacc ttccagccca
     7261 gacgttcaaa cagtgccgga gcaaactcca gtgccatcac gccgatatag atggtcatac
     7321 agaccgccgt ctcgaacagt accgagttca cgttgaagtg acccggaatg tagaagtacg
     7381 gcaggttcca gtagcgaccc acgtcgatag tgatcgacaa gccacccagt gagtaaccaa
     7441 acagactcgc caacagcgcc ggacgcacca gcggatggta ttgcccacgg ttaaagacgt
     7501 ataccgccca cgccagcgcc cagccgccac aggcaaagcc ggtaccaatc agcaggtcaa
     7561 acgcgatcca cacgccccac gggaagccgc cgttcaggtc agagacagag cccagaccga
     7621 acaccagacg cttcacaatc aggagcatac agatgacgat taacggtcca aaaatcatga
     7681 ccggtttact gatgattttg ccgcccagcg gttgtggatc atgactcatg atcgtctcct
     7741 ccgtcgtgat ggtcgttttt ggtgttgcga cgaaccagca cggttaagcc cgccagcaca
     7801 gccagtggta gcatcatgcc tttatacagg gtgtgttgaa tattttcgga acgcgcaccg
     7861 gtagaaagat cgtccagttt cggcaggtcg agattttcat aaggcacacc cgtcagtacc
     7921 agaacctgag taccgccgcc ctctttctcg ccgtacagat gcggataata tttcggcacc
     7981 gtatgcaggt aagtgtcgcc agatttcagc gtctgacgcg gatagtggta ttcgctgcca
     8041 ggcttcagcg ccagacgttt tttcgcctcc gccatcagct cttcacgcgt accgaaaatc
     8101 accgcgcccg ccgggcacac ttctacgcag ccaggcagac cgcctttatc gagacgttcc
     8161 acacctttct ggttgcacag ctcgcactta tgcagcgcac caaacgggtt gttgtagtcg
     8221 tacttcggca cgttgtacgg acaggcgacc atgcagtaac ggcaaccggt gcacacgtct
     8281 ttgtcgtaat ggacaatgcc ggttttcgga tcttttttca gtgcagagac cgggcacaca
     8341 gagacacagt tcggatcgac gcagtgcata cactgtttct taatgtacgc gtagccgttc
     8401 tcctcctggt ctttgttgac ccctgtgccg ctggtccaca cctgaatgat gttattggta
     8461 tacggcgaca gtttgtcgtt gttcgaccag gtctgttccc cttgcgggtt acgttcaggg
     8521 aagttgatat cctgacactt ggtgacgcaa gcctggcagc ctacgcacaa ggtcgagtcg
     8581 tacaacatcc ccagcgatcc cggaattggc gggcggtttt cagcagccgc atgactgaca
     8641 gacggcagcg cgcccgtcag caatgccccg caggaggctg ctttaataaa attacgtctg
     8701 ttcacggtta ttctccccgt gagtcagcgt tatctttctt ttgctgacga cccagttcac
     8761 gcaccgccat cacgctgaca ccggcaacca gcccaaccac accgccgagc aaaccaatag
     8821 cgcctgcaga gacgttaccg ccctctttag cgttaacatc cggtttctgt gaacgcggag
     8881 tctgattttc gacgttggca agctgatgga tgcctttatg gaagccgata ccttcttcgt
     8941 tacagccata gcatgggtga ccaatcgcta ccggccacac gccgccaaca tcgcagaatt
     9001 gcagcgttga gcagttgccg taagtttctg gccctttaca gccgaggtgg tacaggcacc
     9061 agccttcacg gtggccttca tcaccgaact ctttggcaaa acgaccagca tcgaagtgcg
     9121 ggcgacgttc gcagtgttcg tgaatcagac ggccataggc gaaggtcgga cgatttttgt
     9181 catccagttt cggcggtttg ccgtaagtga tgatgtgcgc aacggtcgcg aggaagttgt
     9241 gcgggttcgg cgggcagccc ggaatattga taacggtttt gcctggcaga acttcttgca
     9301 ggctgactgc gccagttggg ttaactccag ctgcggcaac accgccccac gcagagcagg
     9361 aaccgatagc gataatcgct gctgcgcctt ctgccgcttt gcggatgtga tccacaatcg
     9421 gctcaccagc aaccatgcaa taaataccgt tatcttttaa tgggatggaa ccatccacaa
     9481 ccaacacata ctgccctttg tacttctcaa gtgcgttatg tttgttctct tcgacctgat
     9541 gaccgaaggc ggcggaaagc acttcgtgat actccagaga gatagtctcc agcacgaggt
     9601 tttctaccgt tggatgcgtt gcacgaagca gagattccgt acaaccggtg cactcctgcg
     9661 cgccaatcca gataactggc ggacgctgcg ggttagtaac cgattcggcc atctctgcag
     9721 cggctttgct acttaacccc atggtggcgg ctaatgctgc acaaagcttc atgaaatcac
     9781 gacggttaat gccgtgagaa tggatgaggg tgttatctcc agtcatttat agttattccg
     9841 ttgcgaagac ctggcatata ttttgcctca atcgcaaaat caataatgcg atcgatgcgc
     9901 catttaccac acatttatta tggttatcga tatcatgata ctgcggcggg gcgctaaaac
     9961 gaagggaaga agcattagtg taattaatta aagcaagata atacgtatgt ttgatcaatt
    10021 ttcgaggcga taaccggcca taaaaaagcg caacgtagaa caggaattat tctcacgaaa
    10081 gaaatccatt accatctctt tatccagtcc atagcggcgc gtcagaatac ccgcttccca
    10141 ggcgctaagc tggcgatctc cggtcttttc gtacatccgg tgtgagtagc ctaatacaaa
    10201 accgcgttta taatcggcac agaattttgt cacattaacc gcactgtcgg catgcgttgc
    10261 ttttaatccc gccattaagc ctttaccaaa atggttattc atcgttcacc tcattcgcta
    10321 tatattatca tatatagcaa tattttaggc aaagaacgac ttttgcgcac gctatttttt
    10381 catgcttgtt taagacgtaa tcccgtaaga gataaaccca tcaggagaga tatttatcga
    10441 accatttcag cgtcctttgc caggcaagat cggcggcaga tttgtcataa cgaggcgtgg
    10501 aatcattatg gaatccgtga ttaacccccg gatagatata cgcctcatag accttattat
    10561 tggctttcaa cgccgcctca taagcgggcc agccctcgtt gattcgggtg tccagttccg
    10621 cgaagtggag tagtaaaggc gcttcaatct tcgccacatc ggcagtgggt gcctgacgac
    10681 cataaaacgg caccgcgcag gccagttccg gatacgcgac agccgccgcg ttcgatacac
    10741 caccgccata gcaaaatccg gtaataccca cttatgcctg tcgcttgcgg atagcgttgc
    10801 ataaactcaa ttgcggcaaa gaaatcattc atcagtttgg ttggatcaac ctgctgttgc
    10861 agctcacgac ctttatcatc atttcccgga taacctc
//
LOCUS       DADKRT010000147        10892 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.149, whole genome shotgun sequence.
ACCESSION   DADKRT010000147 DADKRT010000000
VERSION     DADKRT010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10892
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.149"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            296..1171
                     /locus_tag="JQ356_003207"
     CDS             296..1171
                     /locus_tag="JQ356_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001224622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein"
                     /protein_id="HAY4623212.1"
                     /translation="MRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLIDGQIYD
                     LHSGKIISSSELLADLATARHLIIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEML
                     TSDQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIVMQLLRGPYPLLNA
                     NIGREQMLALYKKNEFPKGKKSTAPVVQEALRETIIAMHEGNLESQQLTSMLSVQQQR
                     DRYMARQLLSAPVPSLLIAGGYHASKNMGVPLHMEDLATGTHPVVLMLAEKGMNITVD
                     HADYVWFVAPDTTKR"
     gene            1179..1955
                     /locus_tag="JQ356_003208"
     CDS             1179..1955
                     /locus_tag="JQ356_003208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004095468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HAY4623213.1"
                     /translation="MMNILHFPQSVKWSSWFICSLLLHGLIFLTFIWRFSEVQPAMSP
                     APAIMLQWAEIIEAPSSPLSLPVGIAQQESAVTEEKQQTEDRQQRPVTEDSDATIEIT
                     RKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVSSNAAPQALVESSRIAAPFNSDSTKRD
                     NSEASWESRVKGHLNRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGTLS
                     LDREAIAVLERAQPLPKPPPEILEGGLFKVKMPITFKLKE"
     gene            2124..4385
                     /locus_tag="JQ356_003209"
     CDS             2124..4385
                     /locus_tag="JQ356_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016536327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY4623214.1"
                     /translation="MNVIKLAIGSGILLLSCGAYSQSISEKTNSDKKGAAEFSPLSVS
                     VGKTTSEQEALEKTGATSSRTTDKNLQSLDATVRSMPGTYTQIDPGQGAISVNIRGMS
                     GFGRVNTMVDGITQSFYGTSTSGTTAHGSTNNMAGVLIDPNLLVAVDVTRGDSSGSEG
                     INALAGSANMRTIGVDDVIFNGNTYGLRSRFSVGSNGLGRSGMIALGGKSDAFTDTGS
                     IGVMAAVSGSSVYSNFSNGSGINSKEFGYDKYMKQNPKSQLYKMDIRPDEFNSFELSA
                     RTYENKFTRRDITSDDYYIKYHYTPFSELIDFNVTASTSRGNQKYRDGSLYTFYKTSA
                     QNRSDALDINNTSRFTVADNELEFMLGSKLMRTRYDRTIHSAAGDPKANQESIENNPF
                     APSGQQDISALYTGLKVTRGIWEADFNLNYTRNRITGYKPACDSRVICVPQGSYDIDD
                     KEGGFNPSVQLSAQVTPWLQPFIGYSKSMRAPNIQEMFFSNSGGASMNPFLKPERAET
                     WQAGFNIDTRDLLVEQDALRFKALAYRSRIQNYIYSESYLVCSGGRKCSMAEVIGNDW
                     EGISDEYSDNMYIYVNSASDVIAKGFELEMDYDAGFAFGRLSFSQQQTDQPTSIASTY
                     FGAGDMTELPRKYMTLDTGVRFFDNALTLGTIIKYTGKARRLSPDFEQDEHTGAIIKQ
                     DLPQIPTIIDLYGTYEYNRNLTLKLSVQNLMNRDYSEALNKLNMMPGLGDESHPANSA
                     RGRTWIFGGDIRF"
     gene            4454..5629
                     /gene="senB"
                     /locus_tag="JQ356_003210"
     CDS             4454..5629
                     /gene="senB"
                     /locus_tag="JQ356_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterotoxin production-related protein TieB"
                     /protein_id="HAY4623215.1"
                     /translation="MNIFTLSKAPLYLLISLFLPTMAMAIDPPERELSRFALKTNYLQ
                     SPDEGVYELAFDNASKKVFAAVTDRVNREANKGYLYSFNSDSLKVENKYTMPYRAFSL
                     AINQDKHQLYIGHTQSASLRISMFDTPTGKLVRTSDRLSFKAANAADSRFEHLRHMVY
                     SQDSDTLFVSYSNMLKTAEGMKPLHKLLMLDGTTLALKGEVKDAYKGTAYGLTMDEKT
                     QKIYVGGRDYINEIDAKNQTLLRTIPLKDPRPQITSVQNLAVDSASDRAFVVVFDHDD
                     RSGTKDGLYIFDLRDGKQLGYVHTGAGANAVKYNPKYNELYVTNFTSGTISVVDATKY
                     SITREFNMPVYPNQMVLSDDMDTLYIGIKEGFNRDWDPDVFVEGAKERILSIDLKKS"
     gene            complement(6002..6190)
                     /locus_tag="JQ356_003211"
                     /pseudo
     CDS             complement(6002..6190)
                     /locus_tag="JQ356_003211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000198547.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6154..6438
                     /locus_tag="JQ356_003212"
     CDS             6154..6438
                     /locus_tag="JQ356_003212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY4623216.1"
                     /translation="MHSTLSPLVPVYPVFITVIADHDKPQPSGCLLESQGSLCPICRQ
                     RITHETGWNVHHKVKKVMGGGEELSNLVLLHPNCHRQLHSCEAGSLKKGL"
     gene            6581..6802
                     /locus_tag="JQ356_003213"
                     /pseudo
     CDS             6581..6802
                     /locus_tag="JQ356_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(6823..6885)
                     /locus_tag="JQ356_003214"
                     /pseudo
     CDS             complement(6823..6885)
                     /locus_tag="JQ356_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            7336..8748
                     /gene="ospC1"
                     /locus_tag="JQ356_003215"
     CDS             7336..8748
                     /gene="ospC1"
                     /locus_tag="JQ356_003215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC1"
                     /protein_id="HAY4623217.1"
                     /translation="MNISETLNSANTQCNIDSMDNRLHTLFPKVTSVRNAAQQTMPDE
                     KNLKDSANIIKDFFRKTIAAQSYSRMFSQGSNFKSLNIAIDAPSDAKASFKAIEHLDR
                     LSKHYISEIREKLHPLSAEELNLLSLIINSDLIFRHQSNSDLSDKILNIKSFNKIQSE
                     GICTKRNTYADDIKKIANHDFVFFGVEISSHQKKHPLNTKHHTVDFGANAYIIDHDSP
                     YGYMTLTDHFDNAIPPVFYHEHQSFLDKFSEVNKEVSRYVHGSKGIIDVPIFNTKDMK
                     LGLGLYLIDFIRKSEDQSFKEFCYGKNLAPVDLDRIINFVFQPEYHIPRMVSTENFKK
                     VKIREISLEEAVTASNYEEINKQVTNKKIALQTLFLSITNQKEDVALYILSNFEITRQ
                     DVISIKHELYDIEYLLSAHNSSCKVLEYFINKGLVDVNTKFKKTNSGDCMLDNAIKYE
                     NAEMIKLLLKYGATSDNKYI"
     gene            complement(8852..9000)
                     /locus_tag="JQ356_003216"
                     /pseudo
     CDS             complement(8852..9000)
                     /locus_tag="JQ356_003216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            9076..10773
                     /gene="ospD3"
                     /locus_tag="JQ356_003217"
     CDS             9076..10773
                     /gene="ospD3"
                     /locus_tag="JQ356_003217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspD3"
                     /protein_id="HAY4623218.1"
                     /translation="MPSVNLIPSRKICLQNMINKDNVSVETIQSLLHSKQLPYFSDKR
                     SFLLNLNCQVTDHSGKLIVCRHLASYWIAQFNKSSGHVDYHHFAFPDEIKNYVSVSEE
                     EKAINVPAIIYFVENGSWGDIIFYIFNEMIFHSEKSRALEISTSNHNMALGLKIKETK
                     NGGDFVIQLYDPNHTATHLRAEFNKFNLAKIKKLTVDNFLDEKHQKCYGLISDGMSIF
                     VDRHTPTSMSSIIRWPNNLLHPKVIYHAMRMGLTELIQKVTRVVQLSDLSDNTLELLL
                     AAKNDDGLSGLLLALQNGHSDTILAYGELLETSGLNLDKTVELLTAEGMGGRISGLSQ
                     ALQNGHAETIKTYGRLLKKRAINIEYNKLKNLLTAYYYDEVHRQIPGLMFALQNGHAD
                     AIRAYGELILSPPLLNSEDIVNLLASRRYDNVPGLLLALNNGQADAILAYGDILNEAK
                     LNLDKKAELLEAKDSNGLSGLFVALHNGCVETIIAYGKILHTADLTPHQASKLLAAEG
                     PNGVSGLIIAFQNRNFEAIKTYMGIIKNENITPEEIAEHLDKKNGSDFLEIMKNIKI"
BASE COUNT         3386 a         2295 c         2298 g         2913 t
ORIGIN      
        1 ttttcttcga catgtacatc aggcgcggaa ctcatcgggg cgcgggaatg aaatcccatt
       61 cagactccgg atagattcaa gcaagcccac ttatcgtcaa aatcggtgtt gcaaaaacgg
      121 gagtgaccat agatccgttt tccaagcgga ccccataata tcggctggta aacatcactc
      181 gctagtgcat tctttttgtt ggtaatgata attatttaca tttattcttt gatgttttat
      241 cataattaat gttttatcaa taaatatatg gaaatatatt gtttcagatg ggaatatgag
      301 aaagttcatc cttatttcta tgataacgtt agctagtgtt agtctgggag cctgcagaca
      361 gaatgtcacc ataaagcagg atgcgccagg gcagaaagct ttcctgattg acgggcagat
      421 ttacgatttg cacagtggca aaattatttc tagcagcgag cttttggcgg atcttgctac
      481 cgctcgacat cttattattg gtgaaaaaca cgataatgcc gagcatcatc agattgagct
      541 ttggcttatt caaaatctgc tcatccagcg accacagggg agtgtgttgc ttgagatgtt
      601 gacgtcagac caacagcccc gagttaacca agttaaatgt tggctgaaag ataatcctgt
      661 ggttcgagat agccgtgttc aggaactact taactggcaa aaagggtggt cctgggagat
      721 gtatggcgac atcgtcatgc agctattacg tgggccttac ccgctgctca atgccaacat
      781 tggccgggag cagatgttgg cactgtacaa aaaaaacgaa tttcctaaag gaaaaaaatc
      841 cactgcacct gtggtacaag aagctctgcg tgaaaccatc atagctatgc atgaaggcaa
      901 ccttgaaagc cagcaactga cgtcaatgct ctctgttcag cagcagcggg atcgctacat
      961 ggcccgccag cttctgagtg ccccggtacc gtcgttgttg attgcaggtg gttatcacgc
     1021 gtcaaaaaac atgggcgtac cgttacacat ggaagatctt gccaccggca cccatccagt
     1081 ggtgttgatg cttgcagaaa aaggaatgaa catcacagta gatcatgctg actacgtgtg
     1141 gtttgtagcg ccagatacaa caaaaaggta aaccatggat gatgaatatt ctccacttcc
     1201 cacagtcggt aaaatggagc agctggttta tctgttctct actgcttcat ggactgattt
     1261 tccttacgtt tatctggcgt ttttccgaag ttcagcccgc tatgtctcct gcaccggcga
     1321 tcatgctgca atgggcagaa attatagagg ctccttcttc tccactttcg cttccggtgg
     1381 gaatcgctca acaggagtcc gcagtgacag aagaaaagca acaaactgag gacagacaac
     1441 aacgtcctgt cactgaagac agtgatgcaa ccattgaaat aactaggaag aaaaagtcat
     1501 ccgatggaga aaagaaaaag acacgtccac ctcgtaagat aaaggctcaa accagcgaca
     1561 gcaaccccac agccgtttcc agtaatgctg cacctcaggc tctggtcgaa tcgtcccgta
     1621 ttgctgcgcc ttttaacagt gactcaacaa agcgagataa ttctgaggca tcttgggaaa
     1681 gcagagtaaa aggccacctt aaccgttata aacgttaccc tggcgatgcc agaaaacgtg
     1741 cacgaaccgg cacagccgtt gtgactttta ccgtaaacac ggaaggcact attgtcagta
     1801 gtttcttgga aatctcgtca ggaacccttt ctcttgaccg cgaagctatt gctgttttag
     1861 aacgcgctca accacttccc aaaccaccgc ctgaaatatt ggagggagga ttatttaaag
     1921 taaaaatgcc gattaccttt aagttgaagg agtaaaggga taattggccg ttcaagttca
     1981 tttaactgaa atttaatttt catttttatg ctgaacattt tatcaaactt ttccactgtc
     2041 gaaaaaatca aaaagacagt agatcataat taataaacaa atagttatac ttatctttat
     2101 taatattata tccaaggaaa tttatgaacg ttataaaact ggctatcggc tcaggcatat
     2161 tattgctcag ctgcggtgct tactcacaat ccatcagtga aaaaactaat tccgacaaaa
     2221 aaggagcggc agaattcagt ccgctcagcg tttctgtcgg gaagacgacc agtgagcagg
     2281 aagctctcga gaaaacaggc gcgaccagtt cccggacaac ggacaaaaac ctgcaatcac
     2341 ttgacgcaac agtgcgtagt atgcctggta cttatactca aatagatcct ggtcagggag
     2401 caatcagtgt gaatattcga ggcatgagcg gatttggtcg tgtaaacact atggtcgatg
     2461 gtattaccca gagtttttac ggaacctcta cctccggaac aacggcgcat ggttcaacta
     2521 acaatatggc tggcgtactt atagatccta acttactggt agcagttgat gttacacgcg
     2581 gtgacagcag tggctctgaa gggatcaacg cccttgccgg tagtgcaaat atgcgtacta
     2641 ttggcgttga cgatgtaata tttaacggta atacatatgg ccttcgttca cgtttctctg
     2701 tcggtagtaa tgggctggga cgcagcggaa tgatcgccct tggtggaaaa agcgacgctt
     2761 ttacggatac gggaagcatt ggcgttatgg ctgctgtgag tggcagttct gtgtactcta
     2821 atttctcaaa tggttctgga attaacagca aagagtttgg ttatgataaa tatatgaagc
     2881 agaaccccaa atcccaactg tataaaatgg atatcagacc agacgaattt aacagcttcg
     2941 aactttccgc tcgaacctat gaaaataaat ttacacgtcg tgatataacc agtgacgact
     3001 attacattaa atatcattac accccttttt ctgaattaat tgactttaac gtaacggcca
     3061 gtaccagtcg cggtaatcaa aagtatcgtg atggctcgct gtatactttc tacaaaacct
     3121 cagcgcaaaa tcgttctgac gcgctggata tcaacaatac cagccggttc actgtcgcgg
     3181 acaatgaact ggagtttatg ctgggcagca aactgatgcg tacccgctat gaccggacca
     3241 ttcactcagc ggcgggcgac ccgaaagcga atcaggaatc gatcgagaac aatccgttcg
     3301 caccctccgg ccagcaggat atttcagcgc tgtataccgg gctgaaggtt acgcgcggca
     3361 tctgggaggc agatttcaat ctcaactaca cacgtaacag gatcacaggg tacaagcccg
     3421 cctgcgattc acgcgttatc tgcgtgccac agggtagcta cgatattgac gataaagagg
     3481 gtggcttcaa cccttcagtt cagctttctg ctcaggtaac accatggctt cagccgttca
     3541 ttggctacag caaatccatg cgcgccccga acatccagga gatgttcttc tctaattcag
     3601 gaggcgcatc catgaaccca ttcctgaagc ctgaacgtgc agaaacctgg caggcgggtt
     3661 ttaacattga taccagagat ttactggtcg aacaggatgc cctgcgcttt aaggctctgg
     3721 cgtaccgcag caggatccag aactacatct acagcgagtc ttatctggtt tgttctggag
     3781 gtcgtaaatg cagtatggct gaggtgattg gcaatgactg ggagggcatt agcgatgaat
     3841 acagcgacaa tatgtacatc tacgttaact cggcaagcga cgttattgca aagggcttcg
     3901 aactggagat ggattatgat gcaggttttg cttttggccg actctctttc agccagcagc
     3961 aaacagacca gccaacctcc atcgccagca cctactttgg cgcaggggat atgaccgaac
     4021 tgcccagaaa atacatgacg ctggatactg gtgttcgctt cttcgataac gcgttgaccc
     4081 tgggcactat cataaaatac acaggcaagg ctcgtcgcct gtcgcctgat tttgagcagg
     4141 acgaacatac cggcgcaata atcaaacagg atttgccgca gatcccaacg attatcgatc
     4201 tctatggtac ttacgagtac aaccgcaacc tgacactgaa actttcggta caaaacctga
     4261 tgaacagaga ttattcggag gcgctgaata agctcaacat gatgccaggt cttggtgacg
     4321 agagccaccc agccaattcc gcgcgtggca gaacatggat atttggcggg gacattcgtt
     4381 tctgatgaca atttccgcca ggttcagaca atacgttttc tctcttatgt caattttatt
     4441 gcaggaacga aaaatgaata ttttcacttt atccaaagca ccgctatact tgttaatttc
     4501 actattttta cccacgatgg ccatggctat cgatccacct gaacgcgaac tttcgcgatt
     4561 tgccctgaaa acgaattacc ttcagtcccc tgatgaaggc gtctatgaac tggcgtttga
     4621 taatgccagt aaaaaggtgt ttgcagcagt caccgatcgt gtaaatcgtg aagccaataa
     4681 aggctatctg tattcgttta attcagattc gctgaaagtc gaaaataaat acacgatgcc
     4741 ataccgggca ttttcgctgg cgataaatca ggataaacat cagctctata tcggacacac
     4801 ccagtcagcg tccctgcgta tcagtatgtt tgacacccca accggtaaac tggtaagaac
     4861 cagcgacagg ttaagtttta aagcggcaaa cgctgcagat tcgcgttttg agcatttgcg
     4921 ccatatggtt tacagccagg attccgatac cctgtttgtg agttatagca atatgctgaa
     4981 aacggccgag ggcatgaagc ctctgcataa gctgttaatg ctcgacggga cgacgcttgc
     5041 cttaaaaggc gaggttaagg atgcttacaa aggtacagcg tatggtctga cgatggatga
     5101 aaaaacacag aaaatctacg ttggcggaag agattacatc aacgaaattg atgcgaaaaa
     5161 tcagacgctg ctgcgtacca tcccgttgaa agatccgaga ccacaaatca caagtgtgca
     5221 gaatctggcg gtggactccg cttctgaccg tgcctttgtg gtggtattcg accatgacga
     5281 tcgttccggt acaaaagatg gcctctatat ttttgactta cgcgacggta aacagcttgg
     5341 ctatgtgcac acaggagccg gagctaacgc ggtgaaatac aatccgaaat ataacgaact
     5401 gtatgtcacc aacttcacta gcggcaccat cagcgtagtg gatgccacca aatacagcat
     5461 cacccgtgaa tttaacatgc cggtctaccc aaaccagatg gtgttgtcgg acgatatgga
     5521 taccctttac attggcatca aagaaggctt taaccgcgat tgggatcctg atgtgtttgt
     5581 ggaaggagct aaagaacgta ttctgagcat tgatttgaaa aagtcgtgat cgggggaaaa
     5641 aacatgggat aaaaactccg ttattccact aaactggccg gactaggaaa agcaaacatc
     5701 tctgtcctgc cggtacgcct gttacgccgc tccatgaggc tgaggaatct ccagaaaacg
     5761 agacaggcac agcattgtac gatcaactga tttgtgccaa taattcaatg aaatcacagc
     5821 tatgcctgtt cacgtatagg aaattgaaaa actaagcgat accactgtcc gcgtcttatg
     5881 cctcgtgcgg taagctgttt ttcacatcac gccggtgttt ttttctttct gtggacggtt
     5941 ttaatactgt aatcggccgt tttttatact taccccgatt cccgggcgca cttatcctgc
     6001 atcaccccgg gatatacctc agcagactga tatcccgcgc gtttttcttc agcccctcca
     6061 cattcagtcc cgcgatggcc cggcggtata ccatccggcc gccacacagc acgcattcga
     6121 acgggtcacg actcaggaac tgtttcacca tttgtgcata gcacactttc gccactggtt
     6181 ccggtttatc ctgtttttat aacggtaatt gcagaccatg acaaaccgca gccgtcaggc
     6241 tgcctactcg agtcacaagg ctctctgtgt ccgatatgcc ggcagcgcat tacccatgaa
     6301 actggctgga acgtacacca taaggtgaag aaagttatgg ggggcggtga agaattatct
     6361 aaccttgtct tgttacatcc aaattgccat cgacagttac acagttgtga agccggctct
     6421 ctcaaaaagg gcttataaag gcttgagcgg tgtaccggga aaccggtatg caccgttctt
     6481 aggggagggc agtccagcaa tgaactgtcc ttacccgaca aacatccaaa acgaacggaa
     6541 cgtgctggaa tccgcatata acccgttgta aagtgaggaa atggacacct cacttgctca
     6601 tgagaacgcc cgcctgcggg cactgttgca gacgcaacag gacactatcc accagatggc
     6661 tgaatacaac cgcctgctct cacagcggat ggcggcttat gcttccgaaa tcaaccgact
     6721 gaaggcgctg gttgcgaaac tgcagcgtat gcagttcggt aaaagcccag aaaaacttcg
     6781 cgcaaaaacc gaacggcaga ttccattttc acgggcgatc tacgccacac aggctctggg
     6841 ttgcagtgac tgctccatta aggcgatttt gaactcataa gggaagtaac aaaaaaactg
     6901 caaaagtaca ataattatat atggccaaac taacctctat taaaaaaaca tcagtttttc
     6961 acacttagtt gagcttcatg aaaaaatcat cgaggatttc attgcagaat acacattcca
     7021 ctaactggaa gcactccata agaggaatca gagaaagtat cgttttttta tagtaaaatt
     7081 cattgctgtt caataaaatt gatataatta ttaaattatg gaaataattt cacaaaaaag
     7141 attaacttga gttcttaagc atcggatttt agatattttg aaatatctgg catcacataa
     7201 catcaaaagt atataatacc cttatctaat tacatgcagt atattgtata tatactcaaa
     7261 aattgtaatt cataccctac tatatcttgt ggggaaagat attaattaaa actgttttca
     7321 tataaggttc attttatgaa tatatcagaa acactgaact cagcaaatac ccaatgcaat
     7381 atagattcta tggataacag attacataca ttgtttccaa aagtgacatc agtgcgaaac
     7441 gctgcacaac aaactatgcc agatgaaaaa aatttaaaag atagtgcaaa tattattaaa
     7501 gatttcttta ggaaaactat agcagcacaa agttatagta gaatgttctc tcaaggctct
     7561 aactttaaat ctttaaatat agcaattgat gcaccatcag acgctaaagc ctcatttaag
     7621 gctattgagc accttgacag attatcgaag cattatatat ctgaaataag ggaaaaactt
     7681 catcctcttt ctgcagagga actcaatttg ctttcgctaa ttattaattc tgatttaatc
     7741 ttcagacatc aaagtaattc tgatttgtct gataaaattt taaacattaa gtcattcaat
     7801 aaaattcagt ctgaaggaat atgcacaaaa cgaaacacat acgctgatga tataaaaaaa
     7861 atagctaatc atgactttgt gttttttggc gttgaaatct ctagccatca gaaaaaacac
     7921 cccctgaata caaaacatca cactgttgat tttggtgcaa atgcgtatat cattgatcat
     7981 gactctccat atggatatat gacattaacc gatcactttg ataatgctat tccacctgtt
     8041 ttttaccatg agcaccaatc atttttagat aaattttcag aggttaataa agaagttagt
     8101 cgatacgtac atggaagtaa aggaattata gatgtaccaa tattcaatac taaagatatg
     8161 aagttagggc tcggattata cctgattgac tttattagaa aaagtgaaga ccaaagcttc
     8221 aaggagtttt gctatggaaa aaatcttgcc cctgtggatc tggatagaat cataaacttt
     8281 gtttttcagc cagagtacca tatacctagg atggtaagta cagaaaactt caaaaaagtt
     8341 aagattagag aaatatcctt agaggaggct gttacagcat ctaattacga agaaattaac
     8401 aagcaggtca ctaacaaaaa aattgctctc cagactcttt ttctttcgat tactaatcaa
     8461 aaagaggatg tcgccttata tatattatct aattttgaga taactagaca agatgttatt
     8521 tccataaagc atgagttgta tgatattgag tatctactta gcgctcataa ttcaagctgt
     8581 aaagtacttg agtattttat caataaggga ttggttgatg taaacacaaa gttcaaaaaa
     8641 actaatagtg gggattgtat gttggataac gcaataaaat atgagaatgc agaaatgata
     8701 aaactattat tgaaatatgg tgcaacatct gacaataaat atatttaatc aaaattgaat
     8761 atcgtttagc aaaaggcagt atttgcacaa aatatcgata tattgtttat tgtcagtatg
     8821 gctcaatgtg ataatagttg gaaagtttga tgggtttcgc cccgttgtag cggtagtcga
     8881 gctggaaggt cttcaggcac tgcttacagc gatagagcag cccccctgaa ctggaatggc
     8941 cgttccggat accccctgag tttcagagta acggggacaa accacatcaa tctttgccat
     9001 caatcatcca aagggcaaag agtacaacaa cactaagtct gcgtcacaac ccatcaatga
     9061 aaggaatata tacatatgcc atcagtaaat ttaatcccat caaggaaaat atgtttgcaa
     9121 aatatgataa ataaagacaa cgtctctgtt gagacaatcc agtctctatt gcactcaaaa
     9181 caattgccat atttttctga caagaggagt tttttattaa atctaaattg ccaagttacc
     9241 gatcactctg gaaaacttat tgtctgtcga cacttagctt cctactggat agcacagttt
     9301 aacaaaagta gtggtcacgt ggattatcat cactttgctt ttccggatga aattaaaaat
     9361 tatgtttcag tgagtgaaga agaaaaggct attaatgtgc ctgctattat ttattttgtt
     9421 gaaaacggtt catggggaga tattattttt tatattttca atgaaatgat ttttcattcc
     9481 gaaaaaagca gagcactaga aataagtaca tcaaatcaca atatggcatt aggcttgaag
     9541 attaaagaaa ctaaaaatgg gggggatttt gtcattcagc tttatgatcc caaccataca
     9601 gcaactcatt tacgagcaga gtttaacaaa tttaacttag ctaaaataaa aaaactgact
     9661 gtagataatt ttcttgatga aaaacatcag aaatgttatg gtcttatatc cgacggtatg
     9721 tctatatttg tggacagaca tactccaaca agcatgtcct ccataatcag atggcctaat
     9781 aatttacttc accccaaagt tatttatcac gcgatgcgta tgggattgac tgagctaatc
     9841 caaaaagtaa caagagtcgt acaactatct gacctttcag acaatacgtt agaattactt
     9901 ttggcagcca aaaatgacga tggtttgtca ggattgcttt tagctttaca aaatgggcat
     9961 tcagatacaa tcttagcata cggagaactc ctggaaactt ctggacttaa ccttgataaa
    10021 acggtagaac tactaactgc ggaaggaatg ggaggacgaa tatcgggttt atcccaagca
    10081 cttcaaaatg ggcatgcaga aactatcaaa acatacggaa ggcttctcaa gaagagagca
    10141 ataaatatcg aatacaataa gctgaaaaat ttgctgaccg cttattatta tgatgaagta
    10201 cacagacaga tacccggact aatgtttgct cttcaaaatg gacatgcaga tgctatacgc
    10261 gcatacggtg agctcattct tagcccccct ctcctcaact cagaggatat tgtaaatttg
    10321 ctggcctcaa ggagatatga caatgttccc ggacttctgt tagcattgaa taatggacag
    10381 gctgatgcaa tcttagctta tggtgatatc ttgaatgagg caaaacttaa cttggataaa
    10441 aaagcagagc tgttagaagc gaaagattct aatggtttat ctggattgtt tgtagccttg
    10501 cataatggat gtgtagaaac aattattgct tatgggaaaa tacttcacac tgcagacctt
    10561 actccacatc aggcatcaaa attactggca gcagaaggcc caaatggggt atctggatta
    10621 attatagctt ttcaaaatag gaattttgag gcaataaaaa cttatatggg aataataaaa
    10681 aatgaaaata ttacacctga agaaatagca gaacacttgg acaaaaaaaa tggaagtgat
    10741 tttctagaaa ttatgaagaa tataaaaatc tgaatattat ctcgtggtga tacactgaat
    10801 ttgaggtaac cggctcattt aaaccgtctg gtctgttacc tccggttcca caaaaataat
    10861 gtccatcatt ttgaagtgga cactatcgta tg
//
LOCUS       DADKRT010000148        10859 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.150, whole genome shotgun sequence.
ACCESSION   DADKRT010000148 DADKRT010000000
VERSION     DADKRT010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10859
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.150"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            83..424
                     /locus_tag="JQ356_003218"
     CDS             83..424
                     /locus_tag="JQ356_003218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flxA-like family protein"
                     /protein_id="HAY4623219.1"
                     /translation="MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQI
                     KEIVDTSGSAEDKQKQAELIQQQITLLETQLAQLQKQQAEKAQEKEQRLSLDVSLLNP
                     VEKTTHIDIYI"
     gene            complement(415..1341)
                     /locus_tag="JQ356_003219"
     CDS             complement(415..1341)
                     /locus_tag="JQ356_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4623220.1"
                     /translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH
                     TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT
                     ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE
                     AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN
                     IVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNR
                     SLSTAAEALWDVVRDQGNALMAGREGDPLYQI"
     gene            1431..2429
                     /locus_tag="JQ356_003220"
     CDS             1431..2429
                     /locus_tag="JQ356_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HAY4623221.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
                     LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF
                     LYLCTLPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS
                     LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
                     GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANG
                     IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA"
     gene            complement(2426..2644)
                     /locus_tag="JQ356_003221"
     CDS             complement(2426..2644)
                     /locus_tag="JQ356_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623222.1"
                     /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG
                     KLGELMQITLLIKTEGLTQLVQPLKRPL"
     gene            complement(2646..4661)
                     /gene="ligA"
                     /locus_tag="JQ356_003222"
     CDS             complement(2646..4661)
                     /gene="ligA"
                     /locus_tag="JQ356_003222"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HAY4623223.1"
                     /translation="MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE
                     LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
                     PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED
                     RPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
                     ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
                     GAKVAGSVSKKTDLVIVGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
     gene            complement(4732..5718)
                     /gene="zipA"
                     /locus_tag="JQ356_003223"
     CDS             complement(4732..5718)
                     /gene="zipA"
                     /locus_tag="JQ356_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HAY4623224.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR
                     QPVQQPPEAQVPPQHAPRPAQPVQQPVYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA
                     QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ
                     AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG
                     DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
     gene            5948..6709
                     /gene="cysZ"
                     /locus_tag="JQ356_003224"
     CDS             5948..6709
                     /gene="cysZ"
                     /locus_tag="JQ356_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HAY4623225.1"
                     /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
                     GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
                     FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIP
                     GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL
                     FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR"
     gene            6894..7865
                     /gene="cysK"
                     /locus_tag="JQ356_003225"
     CDS             6894..7865
                     /gene="cysK"
                     /locus_tag="JQ356_003225"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HAY4623226.1"
                     /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            8249..8506
                     /gene="ptsH"
                     /locus_tag="JQ356_003226"
     CDS             8249..8506
                     /gene="ptsH"
                     /locus_tag="JQ356_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HAY4623227.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            8551..10278
                     /gene="ptsI"
                     /locus_tag="JQ356_003227"
     CDS             8551..10278
                     /gene="ptsI"
                     /locus_tag="JQ356_003227"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HAY4623228.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL
                     SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
                     ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
                     ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            10319..10828
                     /gene="crr"
                     /locus_tag="JQ356_003228"
     CDS             10319..10828
                     /gene="crr"
                     /locus_tag="JQ356_003228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HAY4623229.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLPGSVTVG
                     ETPVIRIKK"
BASE COUNT         2649 a         2804 c         2687 g         2719 t
ORIGIN      
        1 tgcgatttgt aagattgatt tttcttctca agttccttgt tcttctaccg atattacctc
       61 gtacagtgac gaggactgaa caatggccac tatctcttca acttcaattc cttccataca
      121 aacacagagt agtaacaggg catcacaagg tagcgatgtt gcttcacaaa tcgcgcggat
      181 aagtcagcaa atcatcaaac tcactcaaca aattaaagag attgtagaca ctagcggcag
      241 tgctgaagac aagcaaaaac aggccgaatt gattcaacag caaatcaccc tactggaaac
      301 acaactggcg cagttgcaga aacagcaggc agaaaaggcg caggagaaag agcagcgttt
      361 gtctctggat gtatcccttc taaatcctgt tgaaaaaacg actcatatcg atatctatat
      421 ctgatacaac ggatcccctt cccgaccagc cattagcgca ttgccctggt ctcgtaccac
      481 gtcccataac gcttcagcgg cggtggaaag tgaacggttc ttcctgcgca ccagcatcaa
      541 ctggcgttca acaaccggcg taatgcgctt taccaccagt gggctacctt caggcaatgg
      601 tagcgccagt gcgggaagaa tactgatgcc gatgcctgcg gctaccatcg ggaacagcgt
      661 cgccggatgt ccaatctcct gcacaatatt cgcctgaata ccattgcgcg ccagcgctgc
      721 gtcaatcagc ggtcggctgc ctgacgcgta atcctgcaac accaatttcg ctccctgtaa
      781 tgcctgccag ggtacataat cttccacggc caaagcgcta tcgcgatggc aaagcagaaa
      841 gaaaggctcg gaaagaatcg cttcacattg cagatcgccc actgggcctg gatcgatgac
      901 gatgccaaag tcgacatctc cctggcgaat actttccatc acccactgct gcggacgatc
      961 gtgcaggaca aactgaatat ctggatagcg gcgatggctt tcagcaatgc attgcggaat
     1021 aagatgcgcg gaaatggtct ggctggcagc gacccgaact tttccgctca gttgttgccc
     1081 catacgcccg gtatcgcgca acgtgctgtt aagttcatcc agcagtcgct caagacgcaa
     1141 agccaactgc tgccctgcat ctgtaagcac cacttcacgc gtggttctgt ccagcaggcg
     1201 aacaccagta tgattttcca gctccttcac actgtgactt actgccgact ggctcaagcc
     1261 gatacgctct cctgcacgac taaaactttt ctcctgcgct actgtgacga aaacctttaa
     1321 ttgttttaaa gaataattca tctgttttct tcatgaatgg atgcaataaa tcaattttat
     1381 ttctcaaact ggaagaagca caatagaacc atcgatcatc tggagtcttt atgaaacttt
     1441 ttcgtatcct cgatcctttc accttaaccc tgatcacggt ggtgttgctg gcctctttct
     1501 ttccggccag aggcgatttc gtccccttct ttgaaaatct gaccaccgca gctattgccc
     1561 tgctgttctt tatgcacggc gcgaagttgt cgcgtgaggc gattattgct ggcggtggtc
     1621 actggcgact gcatttgtgg gtaatgtgca gcaccttcgt gctgtttccg attctgggtg
     1681 tactgtttgc ctggtggaaa ccggtaaatg tcgacccgat gctctactcc ggttttctct
     1741 acttgtgcac tctcccggct accgtgcagt ctgcaatcgc cttcacgtca atggcgggcg
     1801 gtaacgtcgc ggcggcggtt tgttctgcgt cagcatccag cctgctggga attttccttt
     1861 caccattgct ggttggtctg gtgatgaatg ttcacggtgc agggggcagc cttgagcagg
     1921 tcggtaaaat tatgctgcaa ctgctgctgc cgtttgtgtt ggggcatctt tcccggccgt
     1981 ggattggtga ctgggtgtcg cgcaataaaa aatggattgc gaaaactgac cagacgtcca
     2041 ttctgttggt ggtttataca gcgttcagcg aagccgtcgt taatggtatc tggcataaag
     2101 ttggctgggg atcattgctg tttatcgtgg tggtcagctg cgttcttctg gctatcgtga
     2161 ttgtagttaa cgtctttatg gcacgccgac tgggcttcaa taaggcagat gaaattacta
     2221 tcgtcttttg tggttcgaaa aagagtctgg caaatggcat cccgatggca aacattctgt
     2281 tccccacatc ggtgatcggt atgatggtgc tgcccctgat gattttccat cagatccaat
     2341 tgatggtctg tgcggtgctg gcgcgtcgat acaaacgcca gaccgaacag ttacaggcgc
     2401 agcaggaaag cagcgccgat aaagcttaaa gcggacgctt caggggctgg accagttgcg
     2461 tcagcccctc ggttttaatc agcagcgtga tttgcattag ctcaccgagc ttccctgccg
     2521 ggaactcatc tttgcgggca aaccacagca gatactcctc cggcaggtcg attaagcgac
     2581 gccctttgta tttgccaaac ggcattatcg tattggctat ttcaatcagc tgctcttttt
     2641 ccatctcagc tacccagcaa acgcagcatt tccgcttcgt cgatgacttc aatgcccagt
     2701 tcctgcgcct tcgccagttt agatcctgca gcttcaccca caatcaccag atcggttttc
     2761 ttcgacacgc tgcccgcgac tttcgcgccc agttcgacca gtcgagcttt agcgtcatca
     2821 cgcgacatct ggcttaagct gcccgtaagc accacggttt taccagcaaa cgggctgtca
     2881 atctcttccg cgttgataac gatcggcgca ggccagtgaa caccttccgc caacagctcg
     2941 ctgatgacat tgcggttgct ttcttcggca aagaagttgt gaacgtggga tgcaacgaca
     3001 atgccaacat caggcacctt ttgcagctct tcaatcgaag cggcttccag cgcttccagc
     3061 gtgccgaaat atgccgccag acctgctgcg gtggcctcgc cgacttcacg gatgccaagt
     3121 gcatagagga agcgagcaaa ggtggtttct ttcgcttttt ccagcgcgtt aaccacgttt
     3181 tgtgccgatt ttggccccat acgctccagt ccggtcagtt tgcctgcggt gagtttgaac
     3241 agatctgccg gagtgtggac atattctttt tcaaccagct gatcgatgat tttgtcgccc
     3301 attccgtcaa catccatcgc acggcgggaa acaaagtgtt tcagcgactc tttacgctgc
     3361 gcaccgcaaa tcaggccacc ggtacagcgg gcaaccgctt caccttccac acgctcaacg
     3421 tcagaaccac ataccggaca atgcgtcggg aatacaacct cacgggtatc ttccgggcgt
     3481 tcagaaagca cgacgttaac cacctgcggg atcacgtcgc cagcgcggcg aatcaccact
     3541 ttatcgccaa tgcgtaaacc aagacgttcg atttcatccg cattgtgtaa ggttgcgtta
     3601 ctcaccagca cgccagcaac atggacaggt tccagacgcg caacaggcgt aatcgcgcca
     3661 gtacgcccaa cctgaaactc gacgtcacgc acaaaggtca tctgctcctg cgccgggaat
     3721 ttaaacgcta ccgcccagcg cggggcacgc gcgacaaagc caagctgctc ctgctgttcc
     3781 agtgagttga ccttaatcac cacgccgtcg atatcaaagc ccagcgtcgg gcggtcttct
     3841 tccactttgt gatagaacgc cagcacttct tccgccgatt cacaaagcgt tacccgatcg
     3901 ctgaccggca acccccactt tttaaattgc agtaaacggc caagatgagt atccggcagc
     3961 tcgccacctt ccagaacacc aacgccatag cagaaaaaag tgagcggtcg cttcgctgta
     4021 atacgcggat caagctgacg cagtgaacca gctgccgcat tacgtgggtt agcaaaaact
     4081 ttcccgcccg tgcgtcgcgc atcttcgtta atcttttcga accccgcctg cggcaggaac
     4141 acttcaccac gcacttccag acgcgccggg atattctctc catgcagctt cagcggaatg
     4201 gcgcgaatag tacgcacatt agacgtgata tcttccccgg tggtgccatc gccacgggtc
     4261 gcggcactga ctaaaacgcc attttcatac agaatactga cggcaaggcc atccagcttc
     4321 agctcacagc accaggtgac tttctcgttg tttttcagac ggtcctgcac acgtttgttg
     4381 aaagcaagaa agctttcttc atcaaaaacg ttatccagtg acagcattgg tacttcatgg
     4441 cgtatctggc tgaaagccgc cagcggcgca gcacctacac gttgggtagg cgaatcaggc
     4501 gtaatcagtt ctggatgttt agtttccagc tcgcgcagtt cgcgcatcag cctgtcgtat
     4561 tcagcgtcgg gaatttccgg cgcatccatc acatgataaa gatattcatg atggcgaagc
     4621 gtcgttcgca gttctgtcag ttgttgttcg attgattcca tatcgcacca tcaatgctaa
     4681 aaacccccga caagcggggg ttcgaagaag agttaatttg ccttaagtgt atcaggcgtt
     4741 ggcgtctttg acttcgcgga tgatgtcctg gtactcgcgc aatttctgcg gagtcatcat
     4801 acggcgctga tcgtcaagca cgacaccgcc cacttcatcg gcaatatgct gcgcagattg
     4861 cagcatcagc ttgaagttct gcagctcgtc accgtaagac ggtacctgca taaagatagt
     4921 gacacccgga gtagtgaaat ccttcatttc aggatcaaag gttcccggtt tcaccatatt
     4981 cgccaggctg aataacgccg ggccgctgcc atccgggcta agatgacgat ggtaaatatt
     5041 catatcgcca aaaatgaagc ccgcttgttg aatgctgtta agaagcagtt caccgtttag
     5101 ctcgctaccg tgatgcgccg cgacgttcat gataatcacc gcttctttgc gcttcggttt
     5161 atccataact ggagccggtt ccgctacagg ctcaggctgt ggtgccgcta cgggttctgc
     5221 aggctggaaa gcctgttgtg ccggttgcgg tgctgaatgc acaggctgcg gcgctggcgc
     5281 gacctgtggc gaaactggct gctgcaacgg ctgttcaggc tgcggctgat agacaggctg
     5341 ctgcaccggc tgcgctggac gcggagcatg ttgcggcggt acctgcgctt caggcggctg
     5401 ctggaccggt tgacgcggct gcgcagacgc ataaggcggt tggtactggt gttgcggcga
     5461 cggacgagca gcctcatgct cctgagcgtt agccggggca tgattcacgc ggtgaacacg
     5521 aacctcacca acgccctcat catcttcgac atcctcgtca taagaatcgt cgtcacgttt
     5581 tgacttcatt cgttttaatg gccgatcgcg gaacatagaa gatcgttctt tacggctggt
     5641 ccagaaacca tgtaccagta aagcgattat ggcgatcgcg ccaacaatga ttaatatcag
     5701 acgcaaatcc tgcatcatta tattctctgt tgttctaaca ccttgccacc acggcaaaca
     5761 tttactcact aagagtattt gccgattacc tcaagtgcaa gtgcactatt aactttcaca
     5821 gcacaaagat agatgaaatc gtgctttttg ctgttttttc gaacatatcc taactgtcca
     5881 ttgcgcaatt acccggtaaa atacgcagaa ttttcctagg attggtcaaa aggagctcat
     5941 cctgattatg gtttcatcat tcacatctgc cccacgcagc ggtttttact attttgcgca
     6001 aggctggaag ctcgtctcgc aacctgggat tcggcgtttc gttattttac cgctgctggt
     6061 caatattttg ttgatggggg gcgcattctg gtggctcttt acacagctcg atgtctggat
     6121 cccgactctc atgagttacg ttccggactg gctacaatgg ctgagttatc tgttgtggcc
     6181 tctggctgtc atctctgtgc tgttagtgtt tggctatttc ttctccacga ttgctaactg
     6241 gattgccgct ccgtttaacg gtttattggc tgaacaactg gaagcacgat tgactggcgc
     6301 tacaccgcca gataccggga ttttcggtat catgaaagat gtgccgcgaa tcatgaaacg
     6361 cgaatggcaa aaatttgcct ggtatctgcc gcgcgcaatt gtattactaa ttctttactt
     6421 catccctggt attgggcaaa ccgtcgcgcc ggtactgtgg ttcctgttta gcgcctggat
     6481 gttagccatc cagtattgcg attacccctt cgataaccac aaagtgccgt ttaaagagat
     6541 gcgcaccgcc ctgcgcacac gcaaaatcac caatatgcag tttggtgctt taaccagcct
     6601 gtttacgatg atcccgctgc ttaatctgtt catcatgccc gttgccgttt gtggcgcgac
     6661 ggcgatgtgg gtcgattgct atcgcgataa acacgcgatg tggcggtaac aatctaccgg
     6721 ttattttgta aaccgtttgt gtgaaacagg ggtggcttat gccgcccctt attccatctt
     6781 gcatgtcatt atttcccttc tgtatataga tatgctaaat ccttacttcc gcatattctc
     6841 tgagcgggta tgctacctgt tgtatcccaa tttcatacag ttaaggacag gccatgagta
     6901 agatttttga agataactcg ctgactatcg gtcacacgcc gctggttcgc ctgaatcgca
     6961 tcggtaacgg acgcattctg gcgaaggtgg aatctcgtaa ccccagcttc agcgttaagt
     7021 gccgtatcgg tgccaacatg atttgggatg ccgaaaagcg cggcgtgctg aaaccaggcg
     7081 ttgaactggt tgaaccgacc agcggtaata ccgggattgc actggcctat gtagctgccg
     7141 ctcgcggtta caaactcacc ctgaccatgc cagaaaccat gagtattgaa cgccgcaagc
     7201 tgctgaaagc gttaggtgca aacctggtgc tgacggaagg tgctaaaggc atgaaaggcg
     7261 caatccaaaa agcagaagaa attgtcgcca gcaatccaga gaaatacctg ctgctgcaac
     7321 aattcagcaa tccggcaaac cctgaaattc acgaaaaaac caccggtccg gagatctggg
     7381 aagataccga cggtcaggtt gatgtattta ttgctggcgt tgggactggc ggtacgctga
     7441 ctggcgtcag ccgctacatt aaaggcacca aaggcaagac cgatcttatc tctgtcgccg
     7501 ttgagccaac cgattctcca gttatcgccc aggcgctggc aggtgaagag attaaacctg
     7561 gcccgcataa aattcagggt attggcgctg gttttatccc ggctaacctc gatctcaagc
     7621 tggtcgataa agtcattggc atcaccaatg aagaagccat ttctaccgcc cgtcgtctaa
     7681 tggaagaaga aggtattctt gcaggtatct cttctggagc agctgttgcc gcggcgttga
     7741 aactacaaga agatgaaagc tttaccaaca agaatattgt ggttattcta ccatcatcgg
     7801 gtgagcgtta tttaagcacc gcattgtttg ccgatctctt cactgagaaa gaattgcaac
     7861 agtaatgcca gcttgttaaa aatgcgtaaa aaagcacctt tttaggtgct tttttgtggc
     7921 ctgcttcaaa ctttcgcccc tcctggcatt gattcagcct gtcggaactg gtatttaacc
     7981 agactaatta ttttgatgcg cgaaattaat cgttacagga aaagccaaag ctgaatcgat
     8041 tttatgattt ggttcaattc ttcctttagc ggcataatgt ttaatgacgt acgaaacgtc
     8101 agcggtcaac acccgccagc aatggactgt attgcgctct tcgtgcgtcg cgtctattaa
     8161 aaactggcgc taacaataca ggctaaagtc gaaccgccag gctagacttt agttccacaa
     8221 cactaaacct ataagttggg gaaatacaat gttccagcaa gaagttacca ttacagctcc
     8281 gaacggtctg cacacccgcc ctgctgccca gtttgtaaaa gaagctaagg gcttcacttc
     8341 tgaaattact gtgacttcca acggcaaaag cgccagcgcg aaaagcctgt ttaaactgca
     8401 gactctgggc ctgactcaag gtaccgttgt gactatctcc gcagaaggcg aagacgagca
     8461 aaaagcggtt gaacatctgg ttaaactgat ggcggaactc gagtaatttc ccgggttctt
     8521 ttaaaaatca gtcacaagta aggtagggtt atgatttcag gcattttagc atccccgggt
     8581 atcgctttcg gtaaagctct gcttctgaaa gaagacgaaa ttgtcattga ccggaaaaaa
     8641 atttctgccg accaggttga tcaggaagtt gaacgttttc tgagcggtcg tgccaaggca
     8701 tcagcccagc tggaaacgat caaaacgaaa gctggtgaaa cgttcggtga agaaaaagaa
     8761 gccatctttg aagggcatat tatgctgctc gaagatgagg agctggagca ggaaatcata
     8821 gccctgatta aagataaaca catgacagct gacgcagctg ctcatgaagt tatcgaaggt
     8881 caggcttctg ccctggaaga gctggatgat gaatacctga aagaacgtgc ggctgacgta
     8941 cgtgatatcg gtaagcgcct gctgcgcaac atcctgggcc tgaagattat cgacctgagc
     9001 gccattcagg atgaagtcat tctggttgcc gctgacctga cgccgtccga aaccgcacag
     9061 ctgaacctga agaaggtgct gggtttcatc accgacgcgg gtggccgtac ttcccacacc
     9121 tctatcatgg cgcgttctct ggaactgcct gctatcgtgg gtaccggtag cgtcacctct
     9181 caggtgaaaa atgacgacta tctgattctg gatgccgtaa ataatcaggt ttacgtcaat
     9241 ccaaccaacg aagttattga taaaatgcgt gctgttcagg agcaagtggc ttctgaaaaa
     9301 gcagagcttg ctaaactgaa agatctgcca gctattacgc tggacggtca ccaggtagaa
     9361 gtatgcgcta acattggtac ggttcgtgac gttgaaggtg cagagcgtaa cggcgctgaa
     9421 ggcgttggtc tgtatcgtac tgagttccta ttcatggacc gcgacgcgct gcccactgaa
     9481 gaagaacagt ttgctgctta caaagcagtg gctgaagcgt gtggctcgca ggcggttatc
     9541 gttcgtacca tggacatcgg cggcgacaaa gagctgccat acatgaactt cccgaaagaa
     9601 gagaacccgt tcctcggctg gcgcgctatc cgtatcgcga tggatcgtaa agagatcctg
     9661 cgcgatcaac tccgcgctat cctgcgtgcc tcggctttcg gtaaattgcg cattatgttc
     9721 ccgatgatca tctctgttga agaagtgcgt gcactgcgca aagagatcga aatctacaaa
     9781 caggaactgc gcgacgaagg taaagcgttt gacgagtcaa ttgaaatcgg cgtaatggtg
     9841 gaaacaccgg ctgccgcaac aattgcacgt catttagcca aagaagttga tttctttagt
     9901 atcggcacca atgatttaac gcagtacact ctggcagttg accgtggtaa tgatatgatt
     9961 tcacaccttt accagccaat gtcaccgtcc gtgctgaact tgatcaagca agttattgat
    10021 gcttctcatg ctgaaggcaa atggactggc atgtgtggtg agcttgctgg cgatgaacgt
    10081 gctacacttc tgttgctggg gatgggtctg gacgaattct ctatgagcgc catttctatc
    10141 ccgcgcatta agaagattat ccgtaacacg aacttcgaag atgcgaaggt gttagcagag
    10201 caggctcttg ctcaaccgac aacggacgag ttaatgacgc tggttaacaa gttcattgaa
    10261 gaaaaaacaa tctgctaatc cacgagatgc ggcccaattt actgcttagg agaagatcat
    10321 gggtttgttc gataaactga aatctctggt ttccgacgac aagaaggata ccggaactat
    10381 tgagatcatt gctccgctct ctggcgagat cgtcaatatc gaagacgtgc cggatgtcgt
    10441 ttttgcggaa aaaatcgttg gtgatggtat tgctatcaaa ccaacgggta acaaaatggt
    10501 cgcgcctgta gacggtacca ttggtaaaat ctttgaaacc aatcacgcgt tctctatcga
    10561 atctgatagc ggcgttgaac tgttcgtcca cttcggtatc gacaccgttg aactgaaagg
    10621 cgaaggcttc aagcgtattg cagaagaagg tcagcgcgtg aaagttggcg atactgtcat
    10681 tgaatttgat ctgccgctgc tggaagagaa agccaagtct accctgactc cggttgttat
    10741 ctccaacatg gacgaaatca aagaactgat caaactgccc ggtagcgtaa ccgtgggtga
    10801 aaccccggtt atccgcatca agaagtaatt cttgccgcag tgaaaaatgg cgcccatcg
//
LOCUS       DADKRT010000149        10700 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.151, whole genome shotgun sequence.
ACCESSION   DADKRT010000149 DADKRT010000000
VERSION     DADKRT010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10700
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.151"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(89..238)
                     /gene="hokB"
                     /locus_tag="JQ356_003229"
     CDS             complement(89..238)
                     /gene="hokB"
                     /locus_tag="JQ356_003229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokB"
                     /protein_id="HAY4623230.1"
                     /translation="MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALM
                     ACTSR"
     gene            637..2250
                     /gene="trg"
                     /locus_tag="JQ356_003230"
                     /pseudo
     CDS             637..2250
                     /gene="trg"
                     /locus_tag="JQ356_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415938.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein Trg"
     gene            complement(2288..3210)
                     /locus_tag="JQ356_003231"
                     /pseudo
     CDS             complement(2288..3210)
                     /locus_tag="JQ356_003231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310054.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            3427..4770
                     /locus_tag="JQ356_003232"
     CDS             3427..4770
                     /locus_tag="JQ356_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY4623231.1"
                     /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGPLLELVADVNLAVL
                     ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
                     GGPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
                     QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEYRLIADVVCFP
                     GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
                     AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP
                     DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHLGDDPQPLIERGWVVAQPITYEDFLPVS
                     AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL"
     gene            4995..6650
                     /locus_tag="JQ356_003233"
     CDS             4995..6650
                     /locus_tag="JQ356_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HAY4623232.1"
                     /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
                     FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
                     AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
                     FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
                     KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC
                     FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
                     WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
                     STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS"
     gene            6790..7014
                     /locus_tag="JQ356_003234"
     CDS             6790..7014
                     /locus_tag="JQ356_003234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HAY4623233.1"
                     /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGFDGRGY
                     NAEVVRMKKQKLQLKDEMLKILQQESVKGV"
     gene            7077..7613
                     /gene="rimL"
                     /locus_tag="JQ356_003235"
     CDS             7077..7613
                     /gene="rimL"
                     /locus_tag="JQ356_003235"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HAY4623234.1"
                     /translation="MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQF
                     VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
                     SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
                     FLNDAYDDVNLYARIIDS"
     gene            complement(7608..8588)
                     /locus_tag="JQ356_003236"
                     /pseudo
     CDS             complement(7608..8588)
                     /locus_tag="JQ356_003236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707644.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LbetaH domain-containing protein"
     gene            8712..9704
                     /gene="tehA"
                     /locus_tag="JQ356_003237"
     CDS             8712..9704
                     /gene="tehA"
                     /locus_tag="JQ356_003237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HAY4623235.1"
                     /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
                     VILAMIIWGLLTSAFITRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFR
                     PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATMPGLYLPTVANNFISAMACGALG
                     YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV
                     NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS
                     GSENGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE"
     gene            9701..10294
                     /gene="tehB"
                     /locus_tag="JQ356_003238"
     CDS             9701..10294
                     /gene="tehB"
                     /locus_tag="JQ356_003238"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HAY4623236.1"
                     /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
                     SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST
                     VVLMFLEAKTIPGLIANMQRCTKLGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY
                     EGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK"
     gene            10597..>10700
                     /locus_tag="JQ356_003239"
     CDS             10597..>10700
                     /locus_tag="JQ356_003239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HAY4623237.1"
                     /translation="MRTTSFAKVAALCGLLALSGCASKITQPDKYSGF"
BASE COUNT         2737 a         2496 c         2711 g         2756 t
ORIGIN      
        1 aaacatgcac taactgaagt gtaaaagggg tgccatgaga aaatgaatct gctagtcaga
       61 tgcgcgggga aaatccccgc gcttgccctt acctggacgt gcaggccatg agcgcagcaa
      121 cctccttatc accgtcccgg aaccgcagtt cgtagagcgt ttgtcgggtc aggagtgtga
      181 atgtcagaat cgtaatgcag ataatgagca gacacaccac cagagggttg tgcttcatag
      241 cctttctcct tgccggatgg cgggtaagag gctaagatct gaattgctag gttcattcgt
      301 tggcctcggt tgatagaaat atcggtcggg gccttcgtct ttctgattcc cggttagcct
      361 gaaaacagaa agtctcaggc acccgcaggc atcctatgag gtttccttag ggacgaaaat
      421 aatcacttca cgaaattgcg tgctgttttc cagaattttt cgtcattcgg attagccagt
      481 ttagccattc gttactctct tcattccaat agcattaatt ttctctgcaa taattgttgt
      541 aaaaatgtga cgcaaagagg tttttggtca taagtaatta ccgtcaagtg ccgatgactt
      601 tctatcagga gtaaacctgg acgagagaca acggtaatga atacaactcc ctcacagcga
      661 ttaggttttt tgcatcacat caggctggtt ccgttatttg cctgcattct tggcggtatc
      721 ttagttctat tcgcattaag ttctgctctg gcaggccgat cgcgatcagc gtgatgttac
      781 tgcggagatt gagattcgga ccgggttagc gaacagttca gattttttgc gttcagcccg
      841 gatcaatatg attcaggccg gggctgcgag tcgtattgcg gaaatggaag caatgaagcg
      901 aaatattgcg caagccgaat cggagattaa acagtcgcag caaggttatc gtgcttatca
      961 gaatcgaccg gtgaaaacac ctgctgatga agccctcgac actgaattaa atcaacgctt
     1021 tcaggcttat atcacgggta tgcaacctat gttgaaatat gccaaaaatg gcatgtttga
     1081 agcgattatc aatcatgaaa gtgagcagat ccgaccgctg gataatgctt ataccgatat
     1141 tttgaacaaa gccgttaaga tacgtagcac cagagccaac caactggcgg aactggccca
     1201 tcagcgcacc cgcctgggtg ggatgttcat gattggcgcg tttgtgcgtg ccctggtcat
     1261 gacgctgata acatttatgg tgctacgtcg gatcgtcatt cgtccactgc aacatgccgc
     1321 acaacggatt gaaaaaatcg ccagtggcga tctgacgatg aatgatgaat cggcgggtcg
     1381 taatgaaatc ggtcgcttaa gtcgtcattt acagcaaatg cagcattcac tggggatgac
     1441 agtagggact gttcgacagg gcgcggaaga gatttatcgt ggcaccagcg aaatttcagc
     1501 tggcaatgcg gacctgtcat ctcgcaccga agaacaagcg gcggctatcg aacaaactgc
     1561 cgccagcatg gagcaactca ctgcgacggt gaaacagaat gcggataacg cgcatcatgc
     1621 cagcaaactg gcgcaagagg cttctattaa agccagcgat ggcgggcaga cggagtaaaa
     1681 acgatgggcg ctatctccac gagttcgaag aaaatttctg agatcaccgc cgtcatcaac
     1741 agtattgctt tccagacgaa tattctggca ctgaatgctg ccgttgaagc cgcgcgagcg
     1801 ggtgagcaag ggcgtggatt tgccgttgtc gccagcgaag tacggacact cgcaagtcgc
     1861 agcgctcagg cggcgaaaga gattgaaggc ttgatcagtg aatcagtcag gttaattgac
     1921 ctggggtcgg atgaggtggc aacggccggg aaaaccatga gcactattgt tgatgccgtc
     1981 gcgagtgtca cacatatcat gcaggaaatc gccgccgcct cggatgaaca aagtagaggc
     2041 ataacgcagg ttagccaggc gatttctgaa atggataagg tgacgcaaca gaatgcttct
     2101 ctggtagaag aggcctcagc ggcggcggtg tcccttgaag aacaggcggc acgattaact
     2161 gaggcggtgg atgtattccg tctgaacaaa cattctgtgt cggcagaacc tcgcggagcg
     2221 ggtgaaccag ttagtttcgc tacggtgtga aaatgttcaa ggagggatcg acagatccct
     2281 tcacctttca gaacggcatt gattttcgaa tagcgttaat catcaactgg caaccagaag
     2341 agaacatcgc atctacgcgg gtcagtattc caatcggttc gcctgcacca tgtcccggaa
     2401 caggctgggc caccagcgtg gcatgacgca ggtcgtcttt taccgcgcca gaagggacaa
     2461 accacacgta gtcgtattca accgtaagtt gacgagatag cgaagcagac agcgtttcga
     2521 tacaacccga aggaatttta catccctggc tctgtactaa tgcatctgaa tgctggcgtg
     2581 gcgcagtgcc ttctggtgat acaacgaccg gccatttcag cactcggctt agcgttacgt
     2641 tctcctgaag tagcgggtga ttagggcgga caaccagctt cagcgattca agaaacagca
     2701 gttcgtaatt aagcccggtc atcagttcag gatctgacat ccgaccaatg ccgatatcga
     2761 tttccccggt tttcaaaccc gccagaatca tagggttact cattgtcgca acttgcaagg
     2821 tcgtctcttt ttgttgctga tgaaactgac ctataaccga aggtaatatc cccagtgccg
     2881 cagtaggtag tgcaccaatc ctgacgacat cattattaag accttcttta cgatgaagcg
     2941 actgtccggc agtgttgatg gcgtcaagaa ctctgactgc atgcgttaaa aattgttcgc
     3001 cgggtaaggt aagttgcgcc ccctgacgac cacgctcaaa caagcgagcg cccgtcagct
     3061 gctacagttc attcaatgtc ttagagagcg caggttgact caaattaagg gtttcagccg
     3121 cgcccccaaa gttccttgtt gtgcgacagc tacgaatgta tgaaggtggc gcaaacggat
     3181 gcgctgacta aacagactat ttttttccat aagcgatgtt aaaaacgaag cggtgtcgct
     3241 gacaagtgaa gttgtttgat tatgataact tgattgcaaa atataattaa caattaaagc
     3301 aattgtgtta cagcaaaatg gataatattg atgttttcgc ggcgagatca cagtttgtaa
     3361 attcttcccg ccagagtgaa tgcggttacc tacactccag attactgacc actggaggca
     3421 gacactatgg cgaacagcat cacggcggat gagattcggg aacagttttc gcaggcaatg
     3481 tcagccatgt accagcaaga agttccgcag tacggcccgc tgctggaact ggtagctgat
     3541 gtgaatctgg ctgtgctgga aaacaatcct caactgcacg aaaaaatggt aaatgcagat
     3601 gagctggcgc gactgaatgt tgaacgtcat ggggcgattc gcgttgggac tgcacaagag
     3661 cttgctactc ttcggcggat gtttgccatt atggggatgt acccggtgag ctattacgat
     3721 ctctcgcagg caggggggcc ggtacattcg acagcatttc ggcccattga tgatgcttct
     3781 ctggcgcgta atcccttccg cgtttttacc tccttactcc gccttgagct tatcgagaac
     3841 gaaattttgc gccagaaagc ggcggagatt ctgcgtcagc gcgatatctt caccccacgt
     3901 tgtcgacaac tgttagagga atatgagcag cagggcggtt ttaacgaaac acaggcacag
     3961 gaatttgtgc aagaggccct ggaaacgttt cgctggcacc agtcagcaac ggtagatgaa
     4021 gaaacctatc gcgccttgca caacgaatat cggttgattg ctgatgtggt ctgttttcct
     4081 ggatgccata tcaaccacct gacgccacgt acgctggata ttgaccgggt gcagtcgatg
     4141 atgcctgaat gcggaattga acccaaaatt ctcatcgagg ggccgccgcg ccgcgaggta
     4201 ccgattttac tacgccagac cagctttaaa gcactggaag agacggtgtt gtttgcgggg
     4261 cagaaacagg gcacgcatac cgcgcgcttt ggtgaaattg agcagcgtgg cgtggcatta
     4321 acgccgaaag ggcgacaact gtatgatgat cttctgcgta acgctggaac cgggcaggat
     4381 aatctcactc accaaatgca tttacaggaa accttccgca cttttcctga cagtgagttt
     4441 ttaatgcgtc agcaagggtt ggcatggttc cggtaccgtc tgacgccttc gggtgaggcg
     4501 catcgtcagg cgattcatct tggagacgat ccacagcctt taattgaacg tggttgggta
     4561 gtggcgcaac ccatcaccta tgaagatttc ttgcccgtta gcgcggcggg gatcttccag
     4621 tcaaatctgg gtaatgaaac gcagacacgc agtcacggta atgccagtcg cgaagcattt
     4681 gagcaggcgt tgggttgtcc ggttttggat gagttccagc tttaccagga agcggaagaa
     4741 cgcagtaaac gtcgctgtgg tttgctttaa attctgacca tccgcctttg caaaaatttg
     4801 cctgatttta caaacgaatc aggctcatcc catcgacata aaaaaaatgc cgatttatgc
     4861 atattctctc agttcaacaa ttggattatt aataaatatt gtctagagtg agcggtcata
     4921 aataagcact ttcttgccgc tgaaaacgac cagcgcggga ccattcacaa caccagaagg
     4981 actcactttc aggtatggat cgtagacgat ttattaaagg ttcaatggct atggccgccg
     5041 tgtgcggtac cagcggcatt gcttctcttt tttctcaggc ggcattcgcg gcagattctg
     5101 atattgccga cgggcaaacc cagcgttttg acttctccat tctacagtca atggcgcacg
     5161 acttagcgca aacagcgtgg cgtggtgcgc ctcgtccgtt acctgacacg ctggcgacaa
     5221 tgacgccgca ggcttataac agtattcaat acgacgccga aaaatcgctc tggcataacg
     5281 ttgagaaccg tcaactggac gctcagttct tccatatggg aatgggattc cgtcgccgcg
     5341 ttcgtatgtt ttctgtagat ccagcaacac atctggcgcg tgaaattcac tttcgcccgg
     5401 agttgttcaa atacaacgat gcgggtgttg atacaaaaca attagaaggg caaagcgatc
     5461 tcggctttgc cggttttcgc gtgtttaaag cccccgaact ggcgcgccgt gatgtagtat
     5521 catttctcgg cgcgagttat ttccgcgccg ttgatgatac atatcaatac ggtttgtcgg
     5581 cccgcggcct ggcgatcgac acttacaccg acagtaaaga agagttcccc gactttaccg
     5641 ccttctggtt tgatacggta aaaccggggg caactacctt taccgtttat gcgttgctcg
     5701 atagcgccag cattactggt gcctataagt tcactatcca ttgtgagaaa agtcaggtga
     5761 ttatggatgt ggaaaatcac ctgtatgcgc gcaaagacat taaacagctg ggcattgcgc
     5821 cgatgaccag tatgttcagc tgcggtacta atgaacgtcg gatgtgcgat acaattcatc
     5881 cgcaaattca tgactctgat cgtctgtcca tgtggcgggg caacggcgag tggatttgcc
     5941 gtccgctgaa taatccgcaa aaattgcagt tcaatgctta caccgacaac aacccgaaag
     6001 ggtttggttt attgcaactg gatcgtgact tctcccatta tcaggacatt atgggctggt
     6061 ataacaaacg cccaagtctg tgggtggaac cgcgtaacaa gtggggtaag ggcaccatcg
     6121 gcctgatgga aatcccaaca acgggcgaaa cgctggataa cattgtctgt ttctggcagc
     6181 cagaaaaagc tgtaaaagca ggtgatgagt ttgcattcca gtatcgtctg tactggagtg
     6241 cgcaaccgcc tgttcattgc ccattagcgc gcgttatggc gacgcgtacc ggcatgggcg
     6301 gtttcccgga aggttgggcg ccaggtgaac actatcccga aaaatgggcg cgtcgttttg
     6361 ccgtcgattt cgttggtggt gatctgaaag ctgccgcgcc aaaaggcatt gagccggtga
     6421 ttacgctttc cagtggggaa gcgaagcaaa tcgaaattct ctatattgaa cccatcgatg
     6481 gttatcgtat tcagtttgac tggtatccga cttcggactc cactgatccg gtcgatatgc
     6541 ggatgtatct acgttgtcag ggggacgcta tcagtgaaac atggctgtat cagtatttcc
     6601 cgccagcgcc ggataaacgt cagtatgttg acgaccgcgt gatgagttaa ttgttttttc
     6661 ttcggcacct tcttcgggag gtgccgtctg gttaaacacg atcccgctcg catttttccc
     6721 taagttaaat gagtaatctg atggtgtgta tttcagatac accttgtcag ccactaacag
     6781 ggagtgcgta tgtttccaga ataccgagat ttaatatccc gtctgaaaaa cgaaaatcct
     6841 cgctttatgt ccttgttcga taaacacaat aaacttgatc atgaaattgc cagaaaggaa
     6901 ggtttcgacg gtcgagggta caatgcggaa gtggtccgca tgaaaaaaca aaagctacag
     6961 ttaaaagatg agatgctcaa aatcctgcag caggagagcg tcaaaggggt gtaaactttc
     7021 ctaagccgcc agccaggcgg cttttttaac aacagcatgg attgactgga gataagatga
     7081 ctgaaacgat aaaagtaagc gaatcacttg aattacatgc tgttgcggaa agtcacgtca
     7141 cacctcttta tcagttaatc tgtaaaaata aaacctggtt acagcagtcg ctaaactggc
     7201 cgcagttcgt tcagagtgaa gaggacacgc gaaaaacggt gcagggtaat gtgatgttgc
     7261 atcaacgcgg ctatgccaaa atgttcatga ttttcaaaga agatgaactt atcggcgtta
     7321 tctcgtttaa tcgtattgaa ccactgaata aaactgctga aatcggctac tggctggacg
     7381 aatctcatca ggggcagggg atcatttctc aggcgctgca ggcattgatt catcattacg
     7441 ctcagtctgg tgaacttaga cgcttcgtga tcaaatgtcg ggtggacaat ccgcaaagca
     7501 accaggtcgc tttgcgcaat ggttttatcc ttgaaggttg cctgaaacag gctgagttcc
     7561 tgaatgatgc ctatgatgat gtgaacttat acgcgcgtat tatcgattca taataaccct
     7621 gccagcggcg ttcgcgtaat gcgctcctcg ccgttaatga cttttggacc acggacatga
     7681 accgtgtcgc catcaaaggc ttcaacgacg gcgtggtcgg ttaactccac atggttttca
     7741 attatcaccg cacctgaaat acggctctca ccttgtatta caacgtgctc gtcgagcaga
     7801 atcggttcac cacgtaccac ggcatttccg ccaatcaaga catgatgttt taacacacaa
     7861 ttaccttcca caatggcata ttccgccacc tgcgaactgt aatgaatcgt cggaatggca
     7921 tcttcttcta tgccagcttt cacctgcgcg tgaccgtaga ctttagcgca atcgcatagc
     7981 cagacgttgt tctcttcatt accttcaaca ctggcaaaat caaaaacttc ggcgcgatgt
     8041 tcaataaaag cataccggac gacggcatcg ccataaattt gtgcctggtg gacaatacgc
     8101 gaggcgctaa cccttgcgcg atcataaatt tggagcagga gttgatggtc gggcgttaag
     8161 ccttgtgcgg cgacgatcat agaatgttga tcaattaagg cgtgaccaaa tattctacat
     8221 tgcccgtaaa ctaatgagtc atgaatggtg acactgtcac ttatatatgc accctgactg
     8281 atttcactat tatcgatcca gacgttatcc gttgcgtaaa cctctcccca cagcacgctg
     8341 gtgccggtga tacgcgtatt accagaaatc accgttccgc cgaacgcaat agcattctgg
     8401 tcgtaaatcc agcaatttcc ttcctatgct aacaccgttt cgcgatcgat ccagccgcca
     8461 gcggttcctg ctatcacatc gttaaaatcg ctaatggcga taatctgccg taataacaca
     8521 ctttttttag tgccatcttc ctgataacta aaggctcgct gttcttcact tagacgatat
     8581 ttgcgcatag cgttttctca caggtgactt actataaccg tagcaaattc tgcggctctg
     8641 gctatgctcg agaaaattcc ataaaatgca tttcaaatat actttataaa ttaaacaaaa
     8701 tgagtaagaa gatgcagagc gataaagtgc tcaatttgcc ggcaggctac tttggtattg
     8761 tgttggggac gatagggatg ggatttgcct ggcgctatgc cagccaggtt tggcaggtca
     8821 gccactggtt aggggatggg ctggtgattt tggcgatgat catctgggga ttattaacta
     8881 gcgcatttat tacccgactc atacgctttc cgcatagcgt gctggcggaa gttcgccatc
     8941 cagtgctgag cagttttgtg agtttgtttc cggcaacgac gatgctggtg gcgattggtt
     9001 ttgttccgtg gtttcgccca ctggcggtgt gcctgttcag ttttggtgtc gtggttcagt
     9061 tggcttatgc cgcctggcaa actgcgggat tatggcgcgg atctcaccct gaagaagcta
     9121 ccatgcctgg actgtatctg ccgacagttg ccaacaactt tatcagcgca atggcctgtg
     9181 gtgcgttggg ctacaccgac gccggtctgg tgtttttagg cgcaggcgtt ttctcatggc
     9241 taagccttga accggtgatc ttgcagcgtc tgcgcagttc gggagaatta cccacggcac
     9301 tgcggacatc actcggcatt cagctcgctc ctgcgctggt ggcctgtagt gcctggttga
     9361 gcgtcaacgg cggcgagggt gatacgctgg cgaaaatgct ttttggttat ggactgctgc
     9421 aactgctgtt tatgctacgt ctgatgccat ggtatctctc ccagccattt aatgcttcat
     9481 tctggagttt ctcgttcggc gtatctgcac tggcaaccac cggtttgcat ctggggagtg
     9541 gcagcgaaaa tggatttttc catacgctgg cggtaccgct gtttatcttt accaatttta
     9601 ttattgcaat actgctcatc cgtacttttg cgcttctgat gcagggaaaa ttgttagtca
     9661 gaaccgagcg cgctgtttta atgaaagcag aggacaaaga atgatcattc gtgacgaaaa
     9721 ctattttact gataaatatg aattaacccg cacacactct gaagtactgg aagcggtgaa
     9781 agtggttaaa ccgggtaaaa cgctggatct gggctgtggc aatggtcgta acagtcttta
     9841 cctggcagcc aatggttatg atgttgacgc atgggataaa aatgccatga gtatcgccaa
     9901 tgtagagcgc attaaatcca ttgaaaatct ggataattta cacacccgag tcgttgatct
     9961 gaataacctc acatttgata gacagtacga ttttattctt tcgactgtgg tactgatgtt
    10021 ccttgaggct aaaaccatcc cagggctgat tgccaatatg caacgttgca ctaaacttgg
    10081 tggttacaac ctgattgtgg cggcgatgga taccgctgat tatccatgta ccgtcggctt
    10141 cccgtttgcc ttcaaagagg gagaattacg tcgatattac gaaggctggg agagggtgaa
    10201 atacaatgaa gacgtcggcg agctgcaccg caccgacgcc aacggtaatc gtattaaact
    10261 gcgtttcgcc acgatgctgg cacgtaaaaa atgacccgct aagaataagg cgcgtgaaaa
    10321 ttccccacgc tgagatgatt tactgttctt cttttcggta agcatatttt ttatcgaagg
    10381 gatgtgaaat taatcacagt agtcgaagtt ttttagcagc ttaacttact gaaatttaac
    10441 tactgatgat tgacttagcc cctttttcgg cattgactat gtcgtctgaa aaggggctga
    10501 aaaatttatt ttcaccaaca ctttttttgc cacaacacga agcggcgctt tttgctataa
    10561 cttaaaaagt aatataatca tctcaggaaa ctattcatgc gtaccacatc atttgcgaaa
    10621 gttgcagctt tatgcggctt gttggctctg tctggttgtg cctctaaaat cacccagcca
    10681 gataaatatt ctggtttttt
//
LOCUS       DADKRT010000150        10661 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.152, whole genome shotgun sequence.
ACCESSION   DADKRT010000150 DADKRT010000000
VERSION     DADKRT010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10661
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.152"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            311..1609
                     /gene="kgtP"
                     /locus_tag="JQ356_003240"
     CDS             311..1609
                     /gene="kgtP"
                     /locus_tag="JQ356_003240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HAY4623238.1"
                     /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
                     SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
                     MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
                     YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
                     DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
                     HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS
                     SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV
                     ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL"
     gene            complement(1606..1950)
                     /locus_tag="JQ356_003241"
     CDS             complement(1606..1950)
                     /locus_tag="JQ356_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HAY4623239.1"
                     /translation="MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAM
                     LSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGA
                     STGYTVWQLTRH"
     gene            complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="JQ356_003242"
     CDS             complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="JQ356_003242"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HAY4623240.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
                     ASAKQRICIVALYLEQDDGGKGILNALYKAKRQRPELDVRVLVDWHRAQRGRIGAAAS
                     NTNADWYCRMAQENSGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
                     HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
                     RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
                     PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRLFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
                     PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            complement(3444..6104)
                     /gene="pat"
                     /locus_tag="JQ356_003243"
     CDS             complement(3444..6104)
                     /gene="pat"
                     /locus_tag="JQ356_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HAY4623241.1"
                     /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV
                     LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
                     PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
                     NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLHGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHV
                     AISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH
                     HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
                     RIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN
                     LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
                     SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
                     QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR
                     AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA
                     LARKLGFNVDIQLEEGIVGLTLNLAQREES"
     gene            complement(6136..6834)
                     /locus_tag="JQ356_003244"
     CDS             complement(6136..6834)
                     /locus_tag="JQ356_003244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311476.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DTW domain-containing protein"
                     /protein_id="HAY4623242.1"
                     /translation="MTENTVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCS
                     TITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNP
                     DYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS
                     VDLSRLSAYRLREALAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKT
                     QHLGSITAEQLESV"
     gene            complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="JQ356_003245"
     CDS             complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="JQ356_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HAY4623243.1"
                     /translation="MNTVCTHCQSINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
                     GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
     gene            7529..8566
                     /locus_tag="JQ356_003246"
     CDS             7529..8566
                     /locus_tag="JQ356_003246"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY4623244.1"
                     /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA
                     DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC
                     AHFGVKGVVVQDAALLESGAAIRTAEGGAELVQSITGDNIVNVLDDFRQAGYTVVTTS
                     SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV
                     LLGEWWRQNKA"
     gene            complement(8614..9303)
                     /gene="ung"
                     /locus_tag="JQ356_003247"
     CDS             complement(8614..9303)
                     /gene="ung"
                     /locus_tag="JQ356_003247"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HAY4623245.1"
                     /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPG
                     FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI
                     DWMPVLPAESE"
     gene            9608..9991
                     /gene="grcA"
                     /locus_tag="JQ356_003248"
     CDS             9608..9991
                     /gene="grcA"
                     /locus_tag="JQ356_003248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HAY4623246.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
                     AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="JQ356_003249"
     CDS             complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="JQ356_003249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HAY4623247.1"
                     /translation="MTPTLLSAFWTYTLITAMTPRPNNILALSSATSHGFRQSTRVLA
                     GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
                     KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
                     ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
BASE COUNT         2653 a         2704 c         2739 g         2565 t
ORIGIN      
        1 aaaggccatc cgtcaggatg gcctttttgc attggcgcag aaaaaatgcc tgatgcgacg
       61 ctgcgcgtct tatactccca catatgccag attcagcaac ggatgcggtt tccccaactt
      121 gcctacttcc atacgtgtcc tccttaccag aatttatcct taagctcctc aataaccatt
      181 ttcctgctaa ctaaattcat ggttaatgtt gcataataat acgtaacaaa tgtataacat
      241 tttctttacc aaaagaaata aacaaaagtg accaacaaaa gcatcggatt acggcaggag
      301 acataatggc atggctgaaa gtactgtaac ggcagacagc aaactgacaa gtagtgatac
      361 tcgtcgccgc atttgggcga ttgtgggggc ctcttcaggt aatctggtcg agtggttcga
      421 tttctatgtc tactcgttct gttcactcta cttcgcccac attttcttcc cttccgggaa
      481 cacgacgact caactactac aaacagcagg tgtttttgct gcgggattcc tgatgcgccc
      541 aataggcggt tggctatttg gccgcatagc cgataaacat ggtcgcaaaa aatcgatgct
      601 gttatcggtg tgtatgatgt gtttcggatc gctggttatc gcctgcctcc caggttatga
      661 aactataggt acgtgggctc cggcattatt gcttctcgcg cgtttatttc agggattatc
      721 cgttggcgga gaatatggca ccagcgccac ctatatgagt gaagttgccg ttgaagggcg
      781 caaaggtttt tacgcatcat ttcagtatgt gacgttgatc ggcggacaac tgctagccct
      841 actggttgtc gtggttttac aacacaccat ggaagacgct gcactcagag agtggggatg
      901 gcgtattcct ttcgcgttag gagctgtgtt agctgttgtg gcgttgtggt tacgtcgtca
      961 attagatgaa acttcgcaac aagaaacgcg cgctttaaaa gaagctggat ctctgaaagg
     1021 attatggcgc aatcgccgtg cattcatcat ggttctcggt tttaccgctg cgggctccct
     1081 ttgtttctat accttcacca cttatatgca gaagtatctg gtaaatactg cgggaatgca
     1141 tgccaacgtg gcgagtggca ttatgactgc cgcattgttt gtattcatgc ttattcaacc
     1201 actcattggc gcgctgtcgg ataagattgg tcgccgtacc tcaatgttat gtttcggttc
     1261 gctggcagcc atttttaccg ttcctattct ctcagcattg caaaacgttt cctcgcctta
     1321 tgccgctttt ggtctggtga tgtgtgccct gctgatagtg agtttttata catcaatcag
     1381 tggaatactg aaggctgaga tgttcccggc acaggttcgc gcattaggcg ttggtctgtc
     1441 atatgcggtc gctaatgcta tatttggtgg ttcggcggag tacgtagcgt tgtcgctgaa
     1501 atcaatagga atggaaacag ccttcttctg gtatgtgacc ttgatggccg tggtggcgtt
     1561 tctggtttct ttgatgctac atcgcaaagg gaaggggatg cgtctttagt gacgggtcag
     1621 ttgccagacg gtatagccgg tgcttgcacc ggcgacatcc caggccaaat ccttccagct
     1681 ccagccgctc ccttcggggc ggctatccca aagctctttt gacgccccca aactgacaga
     1741 gaacatcaat ccaaacatgg cactgcgatc ccggctcatc ccctgatgct gtgaatattc
     1801 atttccggcg gcggaaagca tcgccgaggc gataaagtgt tgagctttat cctgcccgct
     1861 ccagctatcg ttagccatat ggctgcatcc agaaagtaac aatagcgaac agacaaaaag
     1921 aatacgcaaa acgtggcctc caaaaaacaa accccgtaca ggacggggtt gtgattacag
     1981 gatgcggcta attaatcggt cgatgcggat acggcgcaaa cggcggatga gtttacgaac
     2041 cttcaccgga taatcggcaa tactttgcag atcgcgatag tgcttaacga tggtggtatg
     2101 ctcgcggatc agctccagtt ctttctctcg ctgcggcgca agctccagtt gtggatcgtg
     2161 gatcaaaatg gcgttttcca gatccagacg ccaggcgcgc gggttcaggt tattaccggt
     2221 gatcaacatc cacttatcat caacccacat ccctttcagg tgataggtgt tgtcgtcatc
     2281 tttccataac cgaaccacta gctggtcagt attgacgtaa tactgcaaac ggctcaggaa
     2341 aagacgcaga ttgatctcat agagataagg caatgcgcca attatcttga aaggttcatc
     2401 ttccggaatg tagaagtcgt tcgcggtttt atcaccaaca ataatttcga cctttttccc
     2461 ttcgcgcagc aactggataa tattgcgcac aaggattgct ggcaggttga agtatggcgt
     2521 acagatggtt agtttctgct cggcacaagg cataagatgg aaaatggtct tgttcaacag
     2581 actcgatttc cccagcccca ctagcggcgt tacggaaagc tgatcgttgt cggcatcgcc
     2641 ctggaaatga taagcggcat cacgcagctc ctggcggaac agacgaatat cgttcttgat
     2701 ttccgggctt tttggccgat taacatcatc cagacgatta acgccgcggc cattcataat
     2761 attctgtgta acccattcaa acataatgtc tgacatctta cggttacgga taagatgata
     2821 acggtcgtag cgatatttat cgtgctgatg caggtaaaca tcgttcaggc tggcaccgct
     2881 ataaagtacg ctatcgtcga tgataaagcc tttaaagtgc agaacaccaa gggcttcacg
     2941 ggtattgatt ggaacgccat aaaccggaac atctacgccc gaattttcct gcgccatgcg
     3001 gcagtaccag tcagcgttag tgttagatgc cgcagcgcca atgcgtccac gttgtgcacg
     3061 atgccagtcg accagcaccc gcacatccag ttccggacgc tgccttttag ctttatacaa
     3121 cgcgttcaga atgcctttgc caccgtcatc ctgttcgaga tacagggcga caatgcaaat
     3181 gcgctgcttc gcgctggcta ttttttccag cagcgtctcc cggaagtcgg cgggagcgta
     3241 aaagaaatcg acatcatcaa ctgattgaga aatcttgggt agttgggcaa ggtgttgttg
     3301 atgtttatta cgcttaaatt ttgacaacat cacagtgcat ttcttctctg ttcattgaag
     3361 gatcctctgt gcaatgcaga cgacataagc gggcaataat aacaccagtc ccgattaagt
     3421 agtcaacatt tccagtacct tactcatgat tcctcgcgtt gggcaagatt tagcgtaagc
     3481 ccaacgatcc cctcttcgag ctggatatca acgttaaacc cgagcttgcg ggctagcgcc
     3541 accatgccac gattgtttgg catcgtaata ccattcagac gttgtagtcc gtgatctcgc
     3601 gtataggtaa tcaacttttc cattaagcgt cgacctaagc ctaacccttt gagatccgag
     3661 cgaaccagca cagcaaattc ggcatcgatg ttatcaggat cggaaatcgc acgcgtgacg
     3721 ccgaggatct cttccgtttg atcaatacgt cgtaccgcta caaacgccat ttcccgatcg
     3781 tagtcgatct gtgtcatgtt ggctaaatct tcatgggtaa attcgttgat ctcgctaaag
     3841 tagcggtaat aaagatcttc tttggtgact cgcgaaatga attgctgaag ttgtggctca
     3901 tcttctggca aaatcgggcg gaacaagcag cgttcaccgt ttttcaattc tacccattct
     3961 tccagctgat gcggataagg gcgcactgcc agccgactct cgttatcgcc ttcaaacggc
     4021 gagatatcca gcgtgacatc cagcgcggta aattcactgc cagaagccag caaaggatga
     4081 atatccagac gctgaatttc cgggcaatcg acaatcaagt tggaaacctg caccagaagc
     4141 tggctcaagc ctgcaacatc caatgggcgt agcgcactgc gcgcacgaat ctttttactt
     4201 ttgatcccct gaataaccag atagcgggcc aggttcatgt tcagcggcgg cagtgcgacg
     4261 acggcttgat cttcaggacg ccactccaca ccgccttcac ccagcatgat caacggcccg
     4321 aaaaccggat cgtgcccaac cacaacccgc aactcctgag cgccagcacg gttagccata
     4381 ctttgcacca acaggccgtg gatccgcgcc tgcggccagg ccatttttac gcgatcgaaa
     4441 atggcgtttg ccgcttgctg gacttcattg gctgtacgca agtacagcat gacgccctga
     4501 acttccgatt tatgtggaat atccggcgaa cgcaatttca gcgccaccgg ataaccaatc
     4561 tgttcggcaa tatgcaccgc ttcggtgcta tcgctggcaa tccaggtagg gagcgtgttc
     4621 atgccatacg cttgcaggat gggctgaact tcatgggtat cgagcgacgt agccccttcg
     4681 gcaatcgcct gttgcaacag aagatgcgct tctgcggtat tggaagtcag attgctgggc
     4741 aacgccggcg tttcgcgtag ttgcttctga ttacgccggt actccaccat atgcataaaa
     4801 gcagtgatgg ttccttccgg ggtacggtag gtcggcagcc cggcttcgct gaataaacgt
     4861 cgtgcctctt gcgaggagtg ctcgccgcac cagttcgtca gcaaagagac atatttgctg
     4921 cggggatgat gctttaccgc ttcaattaat acttgcgcgc tttctgttgc gggagcagcg
     4981 gcgctgggcg aatgaataac catcagcgcg tcaaaatcct ggctgtggag cagaatatcc
     5041 agcgttttaa tatagtgctc actgctggcg tcatcgcgta gatcgagcgg gttagatatt
     5101 gccacatgtt ctggcagtgc atcgcgcagt ttctggcagg tttcttcgct tagcgttgcc
     5161 agcttgccat tgcgtgacca taaggcatcc agcgccagcg cggcaggcgc agcaccgttg
     5221 ctgataatca tcagccggtc gccatgtagc gggcgcatat ggctaagggt ttccaccgcc
     5281 gaaaacagct cgtgggtgtc ctgtacccgc aacaaaccgg cacgctgaat agccgcatcc
     5341 catgccgggt ccattcctgc cgtggtgttg agcagtcgct gtgccgccgg gctacgtccg
     5401 cttttaatca ccagaatcgg tttattacgc gaggcactac gggccgccga aacaaagcgt
     5461 cgcgcgtcgc ttaactgttc gagatagagc aggatggcgc tggttttact gtcgcgtgcc
     5521 agatagtcaa gcaattcatc aacgtcgata tccaggctgt cgccgagcgc aataaagtag
     5581 gaaaagccca tcttacgctg ttgcgcccag tcgaggatgg tgttggagac ggcagccgat
     5641 tgcgaaataa acgccagctt gccgcgttta atcggcacag gcgaaaagct ggcattcaga
     5701 ccttgccagg gagccagtaa acccagactg tttggtccaa gcaggcgcat gttatggcgc
     5761 agggcgcagg cgcggagatc ttcgtgttgc gatgccgggg cggaaagaat aatgcaggtt
     5821 ttacagcctt tctcgccgag ctcttccaga agagcaagat tacggctggc attggtacat
     5881 aaaaccgcaa ggtcgggtgt aaagggcaag ctggcaatat ccggccaggc caacacaccc
     5941 aacaccgctt tccaggctgg cgtcaccggg agtaccggtc cgttaaagcc tcccgccagc
     6001 aggttacgca tcatcaggta acctgcgcga ttgggtttca tcgacgcgcc aattaccgct
     6061 atcgattttg gtcgcagtag tgcttccagt cctcgctgac tcataccggt ctcccgcaga
     6121 agtgaccgaa tgattttaaa cgctttctaa ctgttctgct gtgatgctac ccagatgttg
     6181 cgttttccct gccagatagc gtgttttaaa gcgggtaaaa tgctcgccta accctgctgc
     6241 cgccccggta tcgccggcca tatctaacag tgcgatggct acctcggcag tacaatattg
     6301 gccttcagcc agggcttcac gcaggcgata ggcagaaagc cgggaaagat cgacggaaat
     6361 gacgggaaga ttatccagat acggactttt acgaaacatc ttgcgagctt ccggccaggt
     6421 accatcgagc atgataaaca gcggtggctt accggcaggt ggtgtgaaga tcacttcccg
     6481 ttgctcatca gcatacgagg cgggaaagac caccattggc tgataatccg ggttttgtac
     6541 cagatccagc aaatcctgcg agggttcggt acgcgaccat tgaaacgcaa cggtatcagg
     6601 caaaatatca gcaatcagac gcccggtatt actgggcttc attggctcgg tgtcgaacat
     6661 cagcaaacag aagcgacttt ttgcttgtgc tggggtaatt gtcgaacaga gacataattt
     6721 ctctggcaaa agacagcgtt ggcagcgacg aacgcgatta ccgcgggcaa gaaaaggacg
     6781 tgttgcgcgc gcaatacgct cggcgcgtaa ctggagaaca gtgttttcgg tcataagaga
     6841 gcgtcgaaaa aacgccattg tcgcagagga gaaaacgggg cacaagatgc gccccggtaa
     6901 gattaaagag attcgttcag ccagctatcg aacggagctt tcggtactgc gccattaagc
     6961 atgtcgacaa cctgaccgtt tttgaaaatc atgatcgtcg gtatactacg aattccaaag
     7021 cgactgctca attcacgttc agcttcggta ttcactttca caaagcgcac tttaccgcta
     7081 cgctcttgcg cgacatcttc aaaaattggt gcgaaattac ggcaggggcc gcaccacggt
     7141 gcccagaagt cgatcaccac aggtagatca tccttcagca atttgtcgag tgtttcaccg
     7201 gtcgcattaa tcacctctcc gtcaaacaag tcgtgaccgc agcgtccgca ttttgccgca
     7261 tcttcgatcc gatcgtcggg aatgcgattg atggactgac aatgggtaca aacggtattc
     7321 ataactaacc tcgggatgag taaggagact tatcggcaac gacgccggta tgtttctaat
     7381 atgttacata ttatcgggga cattgttcca gacaacaatc tgttttattc aataggtatg
     7441 atagtcgcag gctttggtac gaaatcatgg agaaccgcgc ggacttcggg taatctgcgc
     7501 gcttcgcgca gcgctggtgg agaaaagcat gaacgatgaa atgaaaggta aaagcggcaa
     7561 ggtcaaagtg atgtatgtcc gcagtgatga tgattctgat aaacgtaccc acaacccgcg
     7621 taccgggaaa gggggcgggc gtccaggaaa atctcgtgct gacggtggcc gtcgccccgc
     7681 ccgcgatgac aaacagagtc agccccgtga ccgcaagtgg gaagattcgc cgtggcgcac
     7741 ggtttcccgc gcgccgggtg atgagacgcc ggaaaaggcc gatcacggtg gcatcagtgg
     7801 taaaagtttt attgatccgg aagtgttgcg tcgtcagcgt gcggaagaaa cccgcgtcta
     7861 cggcgaaaac gcctgtcagg cactgttcca gagccgtccg gaagcaattg ttcgcgcctg
     7921 gtttatccag agcgtaacgc cacgttttaa agaagccttg cgctggatgg cggcaaaccg
     7981 caaagcgtac catgtggtgg atgaagctga attgacaaaa gcgtcaggca cggaacatca
     8041 cggcggcgtt tgcttcctga tcaaaaagcg taacggtaca accgtgcagc agtgggtaag
     8101 ccaggcaggc gcgcaggatt gcgttctggc actggaaaac gaatctaacc cgcataacct
     8161 gggtggcatg atgcgcagct gcgcgcactt cggcgtgaaa ggtgtcgtgg tgcaggatgc
     8221 ggcactgctg gagtcggggg cggctatccg taccgcagaa ggcggcgcag agctcgttca
     8281 gtcgattact ggcgacaaca ttgttaacgt gctggatgat ttccgtcagg caggttacac
     8341 cgtagtgacc acttccagcg agcagggtaa accgctgttc aaaactagtc tgccagcgaa
     8401 aatggtactg gtgctgggtc aggaatatga agggttaccg gatgccgcac gcgatccgaa
     8461 cgatctgcgc gtgaagattg acggtacggg caacgttgcc gggctgaata tctctgtcgc
     8521 aaccggcgtt ttgcttggtg aatggtggcg tcagaataaa gcctgataaa tcagccgggt
     8581 ggcaactctg ccatccggca tttccccgca aatttactca ctctctgccg gtaatactgg
     8641 catccagtca atcggcgtct cgccacgttg ttccagccac tgatttgcca gcacaaaatg
     8701 gttgcagcca aagaatccac gatgcgccga aagcggcgac ggatgcggtg ctttcagtac
     8761 atgatggcgt tgcttatcta taatcgcccc tttcttttgc gcatgtgatc cccacaacaa
     8821 aaacaccacg ccttcgcggt gctggttaat caggctgatg actttatcag taaacgtctc
     8881 ccaaccgagg ctggcgtggg aatgcgcctg acctgcgcga accgtcaaca cagtattgag
     8941 cagcagaacg ccctgacgcg cccagctttc gagatagcca tgattagggc gggtgaagcc
     9001 cggaatagta ttttccagct ctttatacat attcaataat gacggaggaa tggcaatgcc
     9061 gggacgaacg gaaaatgcca gaccatgcgc ctgtcccggt ccgtgataag gatcctggcc
     9121 gagaatcacc actttaacgt cacccaactc ggtaaagcgg aacgcgttaa agacatcttt
     9181 ttgtggtgga tagatagtga cgccggactg ccgctcgctg gcgacggtct gaagggtatt
     9241 aagaaaataa ggttgttgct tctcttcagc cagcacgtca tgccaggtta attcgttagc
     9301 catctcgctc tcctgcgaat cttcaatccg cctagcttaa ctgcttcttt ctacagaaca
     9361 aaatcatgct cattttttag acttaaacga gtgcaaaaaa atgtaaattg gtaaaatttc
     9421 acacccgcat aagttgatgt aaaacaataa aatccattta cgaccacaat cgatgtgtgg
     9481 tttttattga tttaaatcaa agaatcaagg gtggttgagg agtatatata cactcaagca
     9541 acaatggttt taccaattag ccgcgacagg ctgaacaaat caaataattt tgccggggag
     9601 gcatcacatg attacaggta tccagattac taaagccgct aacgacgatc tgctgaactc
     9661 tttctggctg ctggacagcg aaaaaggcga agcacgttgc atcgttgcaa aagcaggtta
     9721 tgcagaagat gaagtggttg cagtaagcaa actgggtgac attgaatacc gtgaagttcc
     9781 agtagaagtg aaaccagaag ttcgcgttga aggtggtcaa cacctgaacg ttaacgttct
     9841 gcgtcgtgaa actctggaag atgcagttaa gcatccggaa aaatatccgc agctgaccat
     9901 ccgtgtatcc ggttatgcag ttcgctttaa ctctctgact ccggaacagc agcgcgacgt
     9961 tatcgctcgt acctttactg aaagcctgta aggcttaagt agcaagttac taagcggaag
    10021 agggcgacct cttccgcttt ttttcgttaa tagaaaatgc gtaccgcgca atagaccagc
    10081 aacagggcaa gcacgatatt taactggcga ccatactggc gaaacaatcg ctgaaacaga
    10141 tgccccgcca gcgcccagca cacattgcca aacgtcccaa tcatcgccag caaaacgctg
    10201 acgccaacta cccagcttag cgcctgtgtt tgcggcagaa caaacgtcga cagtgccgta
    10261 acaccgtaca aaatgatttt gacgttcaca aactgcaaag caaagctggc ccaaaagctg
    10321 attggttttg cctgaagtcc gtcttccttt gttgggctgg tggcgatttt ccacgccagc
    10381 cagacaatat atgccgcccc cgcccaactc aaaaggtgta ccgctgccgg gtcaatcact
    10441 gccagtgaaa atgaaatgcc cgcacacagt aacatcacaa tcaaaaatcc cagactcatc
    10501 cctgccagca cgcgggtact ttgacgaaat ccatgcgacg tagcagagct aagggcgaga
    10561 atattgttcg gtcttggcgt catagcggta atcagggtgt aagtccaaaa agcacttaaa
    10621 agggtcggtg tcacttgtta tctcctctgt tttggtagac a
//
LOCUS       DADKRT010000151        10559 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.153, whole genome shotgun sequence.
ACCESSION   DADKRT010000151 DADKRT010000000
VERSION     DADKRT010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10559
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.153"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(72..1100)
                     /locus_tag="JQ356_003250"
     CDS             complement(72..1100)
                     /locus_tag="JQ356_003250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mal regulon transcriptional regulator MalI"
                     /protein_id="HAY4623248.1"
                     /translation="MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAA
                     IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
                     GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD
                     TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD
                     WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR
                     YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGTTLADRMMQKITHEETHSRNLII
                     PARLIAAK"
     gene            1275..2867
                     /locus_tag="JQ356_003251"
     CDS             1275..2867
                     /locus_tag="JQ356_003251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS maltose transporter subunit IICB"
                     /protein_id="HAY4623249.1"
                     /translation="MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS
                     HDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF
                     VGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM
                     LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINS
                     AGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQTQLSC
                     PTTHGFSESATRFLSQGKMPAFLGGLPAAALAMYHCARPENRHKIKGLLISGLIACVV
                     GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHG
                     LSTKWYMVPVVAAIWFVVYYAIFRFAITRFNLKTPGRDSEVASSIEKAVAAAPGKSGY
                     NVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQV
                     VIGPQVQSVKDEMAGLMHTVQA"
     gene            2877..4049
                     /gene="malY"
                     /locus_tag="JQ356_003252"
     CDS             2877..4049
                     /gene="malY"
                     /locus_tag="JQ356_003252"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional maltose regulon transcriptional
                     repressor/cystathionine beta-lyase MalY"
                     /protein_id="HAY4623250.1"
                     /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
                     CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE
                     LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK
                     PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS
                     NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
                     HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID
                     DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
     gene            4152..5153
                     /gene="add"
                     /locus_tag="JQ356_003253"
     CDS             4152..5153
                     /gene="add"
                     /locus_tag="JQ356_003253"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HAY4623251.1"
                     /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI
                     PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPG
                     YMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
                     DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGIN
                     TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
     gene            complement(5188..6228)
                     /locus_tag="JQ356_003254"
     CDS             complement(5188..6228)
                     /locus_tag="JQ356_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY4623252.1"
                     /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVK
                     ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
                     GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI
                     ESAKHRATLCLA"
     gene            6441..6566
                     /gene="blr"
                     /locus_tag="JQ356_003255"
     CDS             6441..6566
                     /gene="blr"
                     /locus_tag="JQ356_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HAY4623253.1"
                     /translation="MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK"
     gene            6839..7054
                     /gene="ydgT"
                     /locus_tag="JQ356_003256"
     CDS             6839..7054
                     /gene="ydgT"
                     /locus_tag="JQ356_003256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HAY4623254.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
                     HRRAELVSGGRLFDLGQVPKSVWHYVQ"
     gene            7140..7580
                     /locus_tag="JQ356_003257"
     CDS             7140..7580
                     /locus_tag="JQ356_003257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HAY4623255.1"
                     /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
                     QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
                     KAFAFSPVEDGIAVRQLLFTLLATALIVSYFKRSSRVKATFVNP"
     gene            7657..8238
                     /gene="rsxA"
                     /locus_tag="JQ356_003258"
     CDS             7657..8238
                     /gene="rsxA"
                     /locus_tag="JQ356_003258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HAY4623256.1"
                     /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
                     LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFTAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            8238..8816
                     /gene="rsxB"
                     /locus_tag="JQ356_003259"
     CDS             8238..8816
                     /gene="rsxB"
                     /locus_tag="JQ356_003259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HAY4623257.1"
                     /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL
                     PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
                     LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
     gene            8809..>10559
                     /gene="rsxC"
                     /locus_tag="JQ356_003260"
     CDS             8809..>10559
                     /gene="rsxC"
                     /locus_tag="JQ356_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HAY4623258.1"
                     /translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV
                     IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA
                     LAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQG
                     GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP
                     QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDARFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
                     KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
                     QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARA
                     KARKLEQQQANAEPEEQV"
BASE COUNT         2419 a         2734 c         2683 g         2723 t
ORIGIN      
        1 cctgtgtgcc acatttttta tcattaacct tgaggaaagg acactaccag gtatagcaga
       61 taaagagagg attatttcgc tgcaatgagc cgggcgggaa taataagatt gcgtgaatgc
      121 gtctcttcat gggtgatttt ttgcatcatg cgatccgcaa gtgtggtacc aagttcccgc
      181 gcaggcgtgc tggcccaggt aacgggtata tcatcaagtg tggttggtgt cgcatcggta
      241 aatgccgcca gcgaaacttg ttgctcaaag taacgatcga ctccgctttc cccgctttgc
      301 cgccctgctt tcagcaaacc aaaccatgcc cccatcgcaa tagtttcgtt atagcaaacc
      361 acagcactga tggtcgggtt atgacgtaaa agcgccgtga tagcttccgc agcttgcttc
      421 tggctggatg tgcactccag cacccaatcg ctgtgaaacg gcagaccaaa ttttagtaga
      481 gttgcacaat agcctcccac ccgttctgcc cgggttaatg aggaactttg ccctcccagc
      541 caggcgatcc gctgatgccc attgcgaatg agatgctccg tcaacaactg tgcagcctgc
      601 atgttgtccg ggcgaaccgt atcaacatca tcaagataac tggcacggga agcgaaaatc
      661 accgggatag ctttttcttc tgccatccgt cgcaggtcat cgctgcttcc tgcagccccg
      721 gcaattacca caccatcgac cccctgattc agtaacagtg aaaaccgctg tgccagctgc
      781 tcgccgtctt taccgccgtg aagcaaaaaa accatccgtc cctgcgcttc cagagcttcc
      841 gtcaatccgg ccgtcaattc ggcgtaaaac ggcgcagata aatcacggac gatcaaacca
      901 atgacgccgc tttgcccgcc gcgcagcgcc gacgcctggc gattgcgcac aaatcccagc
      961 tcttcaatgg cggcgttaac gcgttctcct gtggcggtag agattcgccc tttgccacta
     1021 agcaccagcg aaacggtact taccgacacg cccgcagcca gcgcaacatc atgaatggtt
     1081 atttttttgg cggtagccat gcagatgacc tactccctga ttatgtgaca gataaaacgt
     1141 tttacctttt atttatctta tacccgctat tatcgttgcg taatgtgatt tatgcctcac
     1201 taaaatttga taaaacgttt tatcttctcg cgcaatttac tgaatccaga ttgttctcta
     1261 cgaggagtcg ttttatgacg gcgaaaacag caccgaaagt cacgctgtgg gagttcttcc
     1321 agcagttagg caaaaccttc atgttacccg tggcattatt gtcgttctgc ggcattatgc
     1381 tcggcattgg tagttctctt agcagccatg atgtcataac cctgatcccg gtcctgggca
     1441 accccgtgtt gcaggctatc tttacctgga tgagtaagat tggctcgttt gcttttagtt
     1501 tcctgcctgt catgttctgt atcgccatcc cgctgggcct ggcacgcgaa aataaaggcg
     1561 tagcggcatt cgctggcttc gtcggttatg cggtaatgaa cctcgcggta aacttctggt
     1621 tgaccaataa aggcattctg ccaaccacgg atgccgcggt tctgaaagcc aataacatcc
     1681 agagcattct tgggatccag tcgatcgata ccgggatcct cggtgcggtg atcgccggta
     1741 ttatcgtctg gatgctgcat gagcgtttcc ataatatccg cctgccggat gcgctggcat
     1801 tcttcggcgg tacgcgcttc gtaccaatta tctcctcgct ggtgatgggc cttgtcggcc
     1861 tggtgattcc attagtctgg ccgattttcg ccatgggtat tagcggcttg ggccatatga
     1921 taaacagcgc gggtgatttc ggaccgatgc tgtttggtac cggtgaacgt ctgctgttgc
     1981 cgtttggtct gcatcacatt ctggtggcat taattcgctt taccgacgca ggcggcacgc
     2041 aggaagtctg cggtcaaacc gtcagcggcg cactgaccat cttccagacg caattgagtt
     2101 gcccgaccac tcacggtttt tctgaaagcg ccacgcgttt cctttcgcaa ggtaaaatgc
     2161 ctgcgtttct cggcggtctg ccagctgcag cgttagctat gtatcactgc gcgcgcccgg
     2221 aaaatcgcca taaaattaaa ggtctgctga tttctggcct gatcgcctgc gtcgttggcg
     2281 gcactaccga accgctggaa ttcctgttcc tgttcgtagc gccagttctg tatgtcatcc
     2341 acgcgctgtt aaccggcctc ggcttcaccg tcatgtctgt gctcggcgtc accatcggta
     2401 ataccgacgg caatatcatc gacttcgtgg tgttcggtat tttgcatggt ctgtcaacca
     2461 agtggtacat ggtgccagtg gtggcggcaa tctggtttgt cgtttactac gccatcttcc
     2521 gtttcgctat cacccgcttc aatctcaaaa ccccggggcg cgatagcgaa gttgccagct
     2581 caatcgaaaa agccgttgcc gctgcgccgg gtaaatcagg ttacaacgtt cctgcaatcc
     2641 tcgaagcatt aggcggtgcc gacaatattg tcagcctcga taactgcatt acccgtctgc
     2701 gtttgtctgt gaaagatatg tcgcttgtta atgtgcaggc actgaaggac aatcgggcaa
     2761 ttggcgtagt acaacttaat caacataacc tgcaggttgt tatcgggcca caagttcagt
     2821 cagtaaaaga tgaaatggcc ggtctgatgc atactgtcca ggcataagga taagatatgt
     2881 tcgatttttc aaaggtcgtg gatcgtcatg gcacatggtg tacacagtgg gattatgtcg
     2941 ctgaccgttt cggcactgct gacctgttac cgttcacgat ttcagacatg gattttgcca
     3001 ctgccccctg cattatagag gcgctgaatc agcgcctgat gcacggcgta tttggctaca
     3061 gccgctggaa aaacgatgag tttctcgctg ctattgccca ctggttttcc acccagcatt
     3121 acaccgccat cgattctcag acggtggtgt atggcccttc tgtcatctat atggtttcag
     3181 aactgattcg tcagtggtct gaaacaggtg aaggcgtggt gatccacaca cccgcctatg
     3241 acgcatttta caaggccatt gaaggtaacc agcgcacagt aatgcccgtt gctttagaga
     3301 agcaggctga tggttggttt tgcgatatgg gcaagttgga agccgtgttg gcgaaaccag
     3361 aatgtaaaat tatgctcctg tgtagcccac agaatcctac cgggaaagtg tggacgtgcg
     3421 atgagctgga gatcatggct gacctgtgcg agcgtcatgg tgtgcgggtt atttccgatg
     3481 aaatccatat ggatatggtt tggggcgagc agccgcatat tccctggagt aatgtggctc
     3541 gcggagactg ggcgttgcta acgtcgggct cgaaaagttt caatattccc gccctgaccg
     3601 gtgcttacgg gattatagaa aatagcagta gccgcgatgc ctatttatcg gcactgaaag
     3661 gccgtgatgg gctttcttcc ccttcggtac tggcgttaac tgcccatatc gccgcctatc
     3721 agcaaggcgc gccgtggctg gatgccttac gcatctatct gaaagataac ctgacgtata
     3781 tcgcagataa aatgaacgcc gcgtttcctg aactcaactg gcagatccca caatccactt
     3841 atctggcatg gcttgattta cgtccgttga atattgacga caacgcgttg caaaaagcac
     3901 ttatcgaaca agaaaaagtc gcgatcatgc cggggtatac ctacggtgaa gaaggtcgtg
     3961 gttttgtccg tctcaatgcc ggctgcccac gttcgaaact ggaaaaaggt gtggctggat
     4021 taattaacgc catccgcgct gttcgttaac cccaattgcg caacgtaaaa atcgttgcgc
     4081 aatcgtggat ttttaccctg ctttgttttt ataatggtgc gcacttttat atccagaaaa
     4141 agagtgcgac catgattgat accaccctgc cattaactga tatccatcgc caccttgatg
     4201 gcaacattcg tccccagacc attcttgaac ttggccgcca gtataatatc tcgcttcctg
     4261 cacaatccct ggaaacactg attccccacg ttcaggtcat tgccaacgaa cccgatctgg
     4321 tgagctttct gaccaaactt gactggggcg ttaaagttct cgcctctctt gatgcctgcc
     4381 gccgcgtggc atttgaaaac attgaagatg cagcccgtaa cggcctgcac tatgtcgagc
     4441 tgcgtttttc accaggctac atggcaatgg cacataagct gcctgtagcg ggtgttgtcg
     4501 aagcggtgat cgatggcgta cgtgaaggtt gccgcacttt tggtgtgcag gcgaagctta
     4561 tcggcattat gagccgaacc ttcggcgaag ccgcctgtca gcaagagctg gaggcctttt
     4621 tagcccaccg tgaccagatt accgcccttg atttagccgg tgatgaactt ggtttcccgg
     4681 gaagtctgtt cctttctcac ttcaaccttg cgcgtgatgc gggctggcat attaccgtcc
     4741 atgcaggcga agctgccggg ccggaaagca tctggcaggc gattcgtgaa ctgggtgcgg
     4801 agcgtattgg acatggcgta aaagccattg aagatcgggc gctgatggat tttctcgccg
     4861 agcaacaaat tggtattgaa tcctgtctga cctccaatat tcagaccagc accgtagcag
     4921 agctggctgc acatccgctg aaaacgttcc ttgagcatgg cattcgtgcc ggcattaaca
     4981 ctgacgatcc cggcgtacag ggagtggata tcattcacga atataccgtt gccgcgccag
     5041 ctgctgggtt atcccgcgag caaatccgcc aggcacagat taatggtctg gaaatggctt
     5101 tcctcagcgc tgaggaaaaa cgcgcactgc gagaaaaagt cgccgcgaag taacaaaatg
     5161 gatggtgcaa attgcaccat ccatttttca tgcaaggcac aaagtcgcgc gatgtttggc
     5221 ggattcgatg cccagctcaa tcaactccat tacctggatt gcctggcttg ccggaaccgg
     5281 attttcacca tcgccattta acgcatcacg aatagccgca tagtaagccg gataattccc
     5341 aggtaccgtc aacagcgttt cttcgacacg ttcctcacct tccacgcggg taagtacgcc
     5401 atcacgcata tcgtagcccc agtcttcctg cggcagacgc tcgccatttt tcagacgttc
     5461 ttcctgtgga tcgaggccat atttcacata actgcctcgg gatccatgca cgatataccg
     5521 tgctgactca gcggctgcca gcatggtacc gtgtaaaatg actcgccgct gtggatagga
     5581 caagatggcg tggaaataat cggtcgactg cgctccgggc cgtaactgtg ccaaatctac
     5641 cgtcatgctg accggtaaac caaatagcgt aatggcctga tcaagaagat gcggtgctaa
     5701 atcgtaccag ataccgctgc ctgggccgcc ctgttcacgc caacgatcgc gcacctgcgg
     5761 acggaagcgg tcaaaatgag actcaaagta agcaacttca cccagcacgc cttccgcgag
     5821 caaacctttt agcgtcaaga aatcgctatc ccaacgacgg ttatggaata cagacagcac
     5881 acgccccagg ctttttgcca gcgcatccag ctctcgcgct tgtgacagtg tcacggtaaa
     5941 gggtttatca acgaccacat gtttacccgc ctcaagcgcc gctttggcta acgggaaatg
     6001 ggtatcgttg ggtgtaggaa tgacaatcag gtctatgttg ggatcgttaa acagatgctt
     6061 cggctcagag acaaccgtaa ccgttggcca gtcggctttt acttttgttt catcactgct
     6121 ggagattacc gccagttcca gcccgggcgt gcccgcaatc aggggcgcat ggaaggtttt
     6181 gctcgcataa ccatacccaa tcaacccaac acggatgttg tcgctcatgt cattgcctct
     6241 cattgaagta tgattgctat ttgacactat cctttaccca cgctcaacag tttaatatta
     6301 agtcaaaaaa atagcgaatt ttccaacgac aaaagctaaa tatcgcaaaa acctcagtaa
     6361 aaatcttgct ggagctatta ttgctaagta acatttaccc cctgaagtta atggatcaat
     6421 caagagagat gtgggctgta atgaatcgtc ttattgaatt aacaggttgg atcgttcttg
     6481 tcgtttcagt cattcttctt ggcgtggcga gtcacattga caactatcag ccacctgaac
     6541 agagtgcttc ggtacaacac aagtaagctc tgcgcttgta gagcgccatg ctgcccgtcc
     6601 ggttgcatgt tttcacttgt cggatattaa accaggaatt tattatcttg ttcgatgttg
     6661 ttggtgattg tcagggatag taaagcgcgt tactcttttc agagcagttt ttcatccctg
     6721 aatatttgcc atcagcgcat tcttattatt gtaataacac aagcgttcac ttttggtgaa
     6781 attttatcat cactaataat acctacccct ttggtattaa ttattttatg gaccttttat
     6841 gactgttcag gactacttat taaaatttcg caaaatcagt tcactcgaaa gtctggaaaa
     6901 actctacgac catcttaatt acaccctgac ggacgatcag gaactgatca atatgtatcg
     6961 tgctgccgat caccgtcgcg cagagctggt ttctggcggg cgtttgtttg acctcggcca
     7021 ggtaccgaag tccgtctggc actatgtcca ataaagaaag tagcgatcgg ttataaaagc
     7081 cttataataa cgcccctaaa attagatttg cctgtttgcg tcgctattct ggagaaccta
     7141 tgaccaccac aacgccacaa cgtattggag gctggttgct tggcccgttg gcctggcttt
     7201 tagtcgctct gttgagtacg acgctggcgt tgttgctgta taccgctgcg ttatcttctc
     7261 cgcaaacatt tcaaacgctc ggcggacaag cactgacgac acaaatctta tggggcgttt
     7321 cttttattac cgctatcgcc atgtggtatt acacactgtg gttgaccatc gctttcttta
     7381 aacgtcggcg ttgtgttcct aaacactata ttatctggct gcttatttcc gtattgctgg
     7441 cagtaaaagc attcgctttt tcacccgtgg aagatggcat agccgttcgc cagttgctgt
     7501 ttactttgtt ggcaaccgca ttgatcgtct cctatttcaa acgctcgtcg cgggtaaaag
     7561 cgacgtttgt gaatccgtaa taaccttaca gttaacctgt tgtcgcctgc tctggattaa
     7621 cggataatag gcggcttttt tatttcaggc cgaaaaatga ctgactacct gttactgttt
     7681 gtcggaactg tactggtcaa taactttgtg ctggtcaagt ttctcggtct ctgtccgttt
     7741 atgggggttt ccaaaaaact ggaaaccgcg atgggcatgg ggctggcaac aacgtttgtg
     7801 atgacgctgg cgtctatttg cgcctggctt atcgatacgt ggattttgat cccacttaat
     7861 ctgatttacc tgcgcaccct ggcatttatt ctggtgattg ctgtggtcgt gcagttcacc
     7921 gagatggtgg tgcgcaaaac cagcccggtg ctttaccgtc tgctggggat ttttttgccg
     7981 cttatcacca ccaactgtgc agtgctcggc gtggcgttgc tgaatatcaa tctcgggcac
     8041 aatttcttgc agtcggcgct gtacggtttt tccgccgctg tcggtttctc gctggtgatg
     8101 gtgctcttca ccgccatccg cgaacgcctt gctgtggctg atgtcccggc accttttcgc
     8161 ggtaatgcca ttgcgttaat taccgcaggt cttatgtctc tggcctttat gggctttagt
     8221 ggtttggtga agttgtaatg aatgctatct ggattgccgt tgccgccgtg agcctgctgg
     8281 gcctggcgtt tggcgccatt ctgggttatg cctcccgccg ttttgcggtg gaagacgatc
     8341 cggtcgttga gaaaattgac gaaatcttac cgcagagcca gtgtggtcag tgcggttatc
     8401 ccggctgtcg cccctacgcg gaagccatca gctgtaacgg tgaaaaaatc aaccgttgcg
     8461 ccccaggtgg cgaagctgtg atgctaaaaa ttgccgagtt gcttaatgtc gagccgcagc
     8521 cgctggatgg cgaagcgcaa gagctaacgc ctgcgcggat ggtggcggtt attgatgaaa
     8581 ataactgtat tggctgcact aaatgtattc aggcttgtcc ggtagacgcc atcgttggcg
     8641 ctacccgtgc catgcatacg gtaatgagtg atctctgtac gggctgcaat ttatgtgttg
     8701 atccgtgccc gacgcactgc atctcgttgc aaccggtcgc agaaacacct gactcctgga
     8761 aatgggatct gaacaccatt cccgtgcgta tcattcccgt ggaacaccat gcttaagtta
     8821 ttctctgcat tcagaaaaaa taaaatctgg gatttcaacg gcggcatcca tccaccggag
     8881 atgaaaaccc agtccaacgg tacacccctg cgccaggtac cactggcgca gcgttttgtt
     8941 attccactga aacagcatat tggcgctgaa ggtgagttgt gcgttagcgt cggcgataaa
     9001 gtattgcgcg gccagccgct tacccgtggt cgcggcaaaa tgctgcctgt tcacgcgccc
     9061 acctcgggta ccgttacggc tattgcgccc cactctacgg ctcatccttc agctttagct
     9121 gaattaagcg tgattattga tgccgatggt gaagactgct ggatcccgcg cgacggctgg
     9181 gccgattatc gcactcgtag tcgcgaagag ttaatcgagc gcatacatca gtttggtgtt
     9241 gccgggctgg gcggtgcagg attcccgaca ggcgttaaat tgcagggtgg cggagataag
     9301 attgaaacgt tgattatcaa cgcggctgag tgcgagccgt acattaccgc cgatgaccgt
     9361 ttgatgcagg attgcgcggc tcaggtcgta gagggtattc gcattcttgc gcatattctg
     9421 cagccacgcg aaattcttat cggcattgaa gataacaaac cgcaggcgat ttccatgctg
     9481 cgcgcggtgc tggcggactc taacgatatt tctctgcggg tgattccaac caaatatcct
     9541 tctggcggtg ctaaacaatt aacctacatt ctgaccggga agcaggttcc acatggcggg
     9601 cgttcatccg atatcggcgt attaatgcaa aacgtcggca ctgcttatgc agtgaaacgt
     9661 gccgttattg atggcgagcc gattaccgag cgtgttgtaa ccctgactgg cgaagcaatc
     9721 gctcgcccgg gcaacgtctg ggcacggctg gggacgccag tgcgtcattt attgaatgat
     9781 gcccgattct gcccctctgc cgatcaaatg gtgattatgg gtggcccgct aatgggcttt
     9841 accttgccat ggctggatgt cccggtcgta aagattacca actgtctgtt ggctccctct
     9901 gccaatgaac ttggcgaacc acaggaagaa caaagctgca tccggtgtag cgcctgtgct
     9961 gacgcctgcc ctgcggatct tttgccgcaa cagttgtact ggttcagcaa aggtcagcaa
    10021 cacgataaag ctaccacgca taacattgct gattgcattg aatgtggggc ttgcgcgtgg
    10081 gtttgcccga gcaatattcc cctggtgcaa tatttccgtc aggaaaaagc tgaaattgcg
    10141 gctattcgtc aggaagaaaa gcgcgccgca gaagccaaag cgcgtttcga agcgcgccag
    10201 gctcgtctgg agcgcgaaaa agcggctcgc cttgaacgac ataagagcgc agccgttcaa
    10261 cctgcagcca aagataaaga tgcgattgct gccgctctgg cgcgggtgaa agagaaacag
    10321 gcccaggcta cacagcctat tgtgattaaa gcgggcgaac gcccggataa cagtgcaatt
    10381 attgcagcac gggaagcccg taaagcgcaa gccagagcga aacaggcaga actgcagcaa
    10441 actaacgacg cagcaaccgt tgctgatcca cgtaaaactg ccgttgaagc agctatcgcc
    10501 cgcgccaaag cgcgcaagct ggaacagcaa caggctaatg cggaaccaga agaacaggt
//
LOCUS       DADKRT010000152        10445 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.154, whole genome shotgun sequence.
ACCESSION   DADKRT010000152 DADKRT010000000
VERSION     DADKRT010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10445
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.154"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(9..1907)
                     /locus_tag="JQ356_003261"
     CDS             complement(9..1907)
                     /locus_tag="JQ356_003261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY4623259.1"
                     /translation="MSQNDIIIRTHYKSPHRLHIDSDIPTPSSELINQFARQLITLLD
                     TSDLSSMLSYCITQEFTANCRKISQNCYSTALFIINFATSPIHAENILITLHYKKEII
                     PLFLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKKIHREKTIQPTVNLNGSAC
                     FLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALL
                     RHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQLVYGQ
                     LNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPL
                     LPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEIIEII
                     TAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKLLQTKSANETPG
                     LYISMLYGFDETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGLFAAMENNHP
                     LCVTRFLSKINGIAFKYKLSKANIMDLLKGATAHGTPVLYIAMSKGNEDVVLSYISTL
                     NIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFS
                     ADELKTYL"
     gene            2429..4357
                     /gene="thrS"
                     /locus_tag="JQ356_003262"
     CDS             2429..4357
                     /gene="thrS"
                     /locus_tag="JQ356_003262"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010245687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HAY4623260.1"
                     /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
                     VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSIL
                     DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
                     IEKLQQEIRSRSLKQLEE"
     gene            4361..4903
                     /gene="infC"
                     /locus_tag="JQ356_003263"
     CDS             4361..4903
                     /gene="infC"
                     /locus_tag="JQ356_003263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HAY4623261.1"
                     /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQRVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            5000..5197
                     /gene="rpmI"
                     /locus_tag="JQ356_003264"
     CDS             5000..5197
                     /gene="rpmI"
                     /locus_tag="JQ356_003264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HAY4623262.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            5250..5606
                     /gene="rplT"
                     /locus_tag="JQ356_003265"
     CDS             5250..5606
                     /gene="rplT"
                     /locus_tag="JQ356_003265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016169860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HAY4623263.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     gene            5729..5773
                     /locus_tag="JQ356_003266"
     CDS             5729..5773
                     /locus_tag="JQ356_003266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanyl--tRNA ligase operon leader peptide"
                     /protein_id="HAY4623264.1"
                     /translation="MNAAIFRFFFYFST"
     gene            6056..7039
                     /gene="pheS"
                     /locus_tag="JQ356_003267"
     CDS             6056..7039
                     /gene="pheS"
                     /locus_tag="JQ356_003267"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HAY4623265.1"
                     /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
     gene            7054..9441
                     /gene="pheT"
                     /locus_tag="JQ356_003268"
     CDS             7054..9441
                     /gene="pheT"
                     /locus_tag="JQ356_003268"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012905611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HAY4623266.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG
                     VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
                     RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
                     VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
                     CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI
                     DITNEATLPKRATITLRRSKLDCLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
                     EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
                     VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV
                     LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            9446..9745
                     /gene="ihfA"
                     /locus_tag="JQ356_003269"
     CDS             9446..9745
                     /gene="ihfA"
                     /locus_tag="JQ356_003269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HAY4623267.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
     gene            complement(10049..10189)
                     /locus_tag="JQ356_003270"
     CDS             complement(10049..10189)
                     /locus_tag="JQ356_003270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HAY4623268.1"
                     /translation="MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
BASE COUNT         2743 a         2364 c         2664 g         2674 t
ORIGIN      
        1 atagttggtt ataaatacgt ctttagttca tcagcactaa aactcaggct ttggctgatt
       61 acatttatag cagcataata tgtttctaca gttttataat gattatgatg aatggctata
      121 tgaacagctg acatgttgtc atgattttta gcggccaaca gtgtgaataa ctgacgttga
      181 ctaaaagaat atttttttgc aaaaatattc agcgtcgata tataagataa cacgacgtct
      241 tcattaccct tgctcatggc gatgtataat acaggggttc catgtgctgt agcgcctttt
      301 aataaatcca tgatgttagc tttgctcaac ttgtatttaa aggcgatgcc attaatttta
      361 gagaggaacc gtgtgacaca caaagggtga ttattttcca ttgcagcaaa caaccctagt
      421 tcaccatcac gtgttttcat tgctaaaata tccatcacta tttttttgtt taaaagctct
      481 tgtgctattg gagtggttaa tgcattcaga aagatatcga ttgtttcatc gaacccatac
      541 aacatggaga tatagagccc aggtgtttcg ttagcacttt tagtttgcag taatttaacc
      601 agattatctt catgaatgat atgattgtat atcagtgact gaatttcttg cataaatatt
      661 tttacgttgt cagtatgtcc gttcatcata gccagaaata aagcaggtgt accaacgcta
      721 ttctgcgcag ttattatttc aatgatttct ttttcaggga gtatgggcaa ctgtttgaat
      781 aatgtaataa gctgttgagt ctggcctgtg gccattatta acaacattgc cgatggatgt
      841 ataggggcaa atggcattcg tgatgcaata cccgcgaaaa tagcccctgg aactcccaca
      901 ggtaataggg gcagaatagc aattgcacag ttgcgaacat acctatcagc ccaggtctga
      961 gcatcgggac ctgaactgat gaacttatca agcgaaagaa agccccgtgc tgtcctgtgg
     1021 gtgcctctga cggcaacgtt ggtatcgttc gggtcgtaga cggacactac atagtttaat
     1081 tgtccataca ctaactgctt tattcgtagc cttactgaca aagtatgatt gtctatatat
     1141 aaaatcgcgg acatatgact gacattgttt gccatcattc gacaaaagaa aatatctaaa
     1201 gcgaagccaa aatccttact cgcgataacg cgactccctg caggaggatg gcgaagtaat
     1261 gctctgaact ccgcatcccg gactaagggg acatgctgct gtatggattc aacggaggag
     1321 taatgtttaa tcaggttgac tttgcctttt ccatttctca atgaatcaag ggcgtattgc
     1381 aatgacagat ggcgacaaaa aatagcgtca gaaggagatt gcaaaaaaca tgcactacca
     1441 ttgagattta ctgttggttg tatagttttt tctctatgga tttttttaga cagtttcata
     1501 caatggttac gatcttcggc agttaactgt tcctgctcaa tataatccag tatgcttcgc
     1561 aaatggttag ccttaatagg cgtggtttcc agaaataagg gaatgatttc ttttttatag
     1621 tgtaatgtaa taagtatatt ttctgcatgg atgggtgaag tggcaaagtt aatgataaaa
     1681 agggcagtgg agtaacaatt ttgtgatatt tttcgacagt ttgcggtaaa ttcctgagta
     1741 atacagtatg acagcatcga acttaagtca gaggtatcaa gtagggtgat gagttggcgc
     1801 gcaaattgat taataagctc tgatgaaggc gttggtatgt cgctatcgat gtgcaatcta
     1861 tgaggagact tataatgagt tctgataatg atatcgtttt gactcataat ctattcacct
     1921 tatatatact ggaggttttg aggatgatga ttaattatta tcgccagaac gaaatgtgca
     1981 cgaaaaattg ctataagaat tgtgtcactt ttatcattgt gatatgacca cttcgtcatt
     2041 aatctcatga tcgtttaaat actaccgcca aatcacgcaa cgaactttgc tggattcagt
     2101 ttatgctgct gtaaatccgc tcgcagtaaa cctttcagac gcaccgtgat gttatcagtg
     2161 gttctttaag cgttttgctg gtgtactcac tacaaacgaa ttgcgaatcg aatcaatgtg
     2221 aaacggaaag gtacaatctc ccttttttta gtgttaacat cgttcaaccg ggtggaaggt
     2281 gagaggttaa tgtctttcat ttgtgtacct gattgcgaac caatttagca tttgttggct
     2341 agatggtttc gcaatgaact gttaataaac aaatttttct ttgtatgtga tctttcgtgt
     2401 gggtcaccac tgcaaataag gatataaaat gcctgttata actcttcctg atggcagcca
     2461 acgccattac gaccacgctg taagccccat ggatgttgcg ctggacattg gtccaggtct
     2521 ggcgaaagcc tgtatcgcag ggcgcgttaa tggcgaactg gttgatgctt gcgatctgat
     2581 tgaaaacgac gcacaactgt cgatcattac cgccaaagac gaagaaggtc tggagatcat
     2641 tcgtcactcc tgtgcgcacc tgttagggca tgcgattaaa caactttggc cgcataccaa
     2701 aatggcaatc ggcccggtta ttgacaacgg tttttattac gacgttgatc ttgaccgcac
     2761 gttaacccag gaagatgtcg aagcactcga gaagcggatg catgagcttg ctgagaaaaa
     2821 ctacgacgtc attaagaaga aagtcagctg gcacgcagcg cgtgaaactt tcgccaaccg
     2881 tggggagagc tacaaagtct ccattcttga cgaaaacatc gcccatgatg acaagccagg
     2941 tctgtacttc catgaagaat atgtcgatat gtgccgcggt ccgcacgtac cgaacatgcg
     3001 tttctgccat catttcaaac taatgaaaac ggcaggggct tactggcgtg gcgacagcaa
     3061 caacaaaatg ttgcaacgta tttacggtac ggcgtgggca gacaaaaaag cacttaacgc
     3121 ttacctgcag cgcctggaag aagccgcgaa acgcgaccac cgtaaaatcg gtaaacagct
     3181 cgacctgtac catatgcagg aagaagcgcc gggtatggta ttctggcaca acgacggctg
     3241 gaccatcttc cgtgaactgg aagtgtttgt tcgttctaaa ctgaaagagt accagtatca
     3301 ggaagttaaa ggtccgttca tgatggaccg tgtcctgtgg gaaaaaaccg gtcactggga
     3361 caactacaaa gatgcaatgt tcaccacatc ttctgagaac cgtgaatact gcattaagcc
     3421 gatgaactgc ccgggtcacg tacaaatttt caaccagggg ctgaagtctt atcgcgatct
     3481 gccgctgcgt atggccgagt ttggtagctg ccaccgtaac gagccgtcag gttcgctgca
     3541 tggcctgatg cgcgtgcgtg gatttaccca agatgacgcg catatcttct gtactgaaga
     3601 acaaattcgc gatgaagtta acggatgtat ccgtttagtc tatgatatgt acagcacttt
     3661 tggcttcgag aagatcgtcg tcaaactctc cactcgtcct gaaaaacgta ttggcagcga
     3721 cgaaatgtgg gatcgtgctg aggcggacct ggcggttgcg ctggaagaaa acaacatccc
     3781 gtttgaatat caactgggtg aaggcgcttt ctacggtccg aaaattgaat ttaccctgta
     3841 tgactgcctc gatcgtgcat ggcagtgcgg tacagtacag ctggacttct ccttgccgtc
     3901 tcgtctgagc gcctcctatg tgggcgaaga caacgagcgt aaggtaccgg taatgattca
     3961 ccgcgcaatt ctggggtcga tggaacgttt catcggtatc ctgaccgaag aattcgctgg
     4021 tttcttcccg acctggcttg cgccagttca ggttgttatc atgaatatta ccgattcaca
     4081 gtctgaatac gttaacgaat tgacgcaaaa actatcaaat gcgggcattc gtgttaaagc
     4141 agacttgaga aatgagaaga ttggctttaa aatccgcgag cacactttgc gtcgcgtccc
     4201 atatatgctg gtctgtggtg ataaagaggt ggaatcaggc aaagttgccg ttcgcacccg
     4261 ccgtggtaaa gacctgggaa gcatggacgt aaatgaagtg atcgagaagt tgcaacaaga
     4321 gattcgcagc cgcagtctta aacaattgga ggaataaggt attaaaggcg gaaaacgagt
     4381 tcaaacggcg cgccctaacc gtatcaatgg cgaaattcgc gcccaggaag ttcgcttaac
     4441 aggtctggaa ggcgagcagc ttggtattgt gagtctgaga gaagctctgg agaaagcaga
     4501 agaagccgga gtagacttag tcgagatcag ccctaacgcc gagccgccgg tttgtcgtat
     4561 aatggattac ggcaaattcc tctatgaaaa gagcaagtct tctaaggaac agaagaaaaa
     4621 gcaaagagtt atccaggtta aggaaattaa attccgtcct ggtacagatg aaggcgacta
     4681 tcaggtaaaa ctccgcagcc tgattcgctt tctcgaagag ggtgataaag ccaaaatcac
     4741 gctgcgtttc cgcggtcgtg agatggcgca ccagcaaatc ggtatggaag tgcttaatcg
     4801 cgtgaaagac gatttgcaag aactggcagt ggtcgaatcc ttcccaacga agatcgaagg
     4861 ccgccagatg atcatggtgc tcgctcctaa gaagaaacag taaggccttc aagtagcact
     4921 gtctgtggag ccttcgggct tcacaggctt tgttcgcctt tgtttcgttt attaacaatg
     4981 cgaagtggaa gttattaaaa tgccaaaaat taagaccgta cgcggtgctg ctaagcgctt
     5041 caaaaaaacc ggtaaaggtg gttttaagca caagcacgct aacctgcgtc acattctgac
     5101 caaaaaagcg accaaacgta aacgtcacct gcgtccgaaa gccatggttt ccaaaggcga
     5161 tctgggcctg gtaatcgcgt gcctgccgta cgcataagcc gttaacgttt ttaacttttt
     5221 aattagaata tagatacagg agagcacata tggctcgcgt aaaacgtggt gttattgcac
     5281 gcgcacgtca caagaaaatt ttgaaacaag ctaaaggcta ctacggtgcg cgttctcgcg
     5341 tataccgcgt tgccttccag gctgttatca aagctggtca gtatgcttac cgtgaccgtc
     5401 gtcaacgtaa gcgtcagttc cgtcaactgt ggattgcacg tatcaacgca gcagcacgtc
     5461 agaacggtat ttcttacagc aaattcatca atggcctgaa aaaagcctct gttgaaatcg
     5521 accgtaagat cctggctgat atcgcagtat tcgacaaagt agcgttcacc gctctggttg
     5581 aaaaagcgaa agcagctctg gcataagcca gttgaaagag ggagcttgtc tccctctttt
     5641 cgtttcaacg ccatcaaaac attgactttt atcgccgtag ccttttcaat aaaggtcttt
     5701 tgaagagtac caaaaggtaa cgcaagcaat gaatgctgct attttccgct tcttttttta
     5761 ctttagcacc tgaatccagg aggctagcgc gtgagaagag aaacggaaaa cagcgcctga
     5821 aagcctccca gtggaggctt tttttgtatg cgcgttttga aaaataaaaa gccagtctat
     5881 caggcgtaat tgtcgcagcc agtctggata cggccagcgc ggagaaaccg gagcgtattt
     5941 aagtacgtga gaatttcgag cactgcccgg gaccaaaatg gcaagtaaaa tagcctgatg
     6001 ggataggctc taagtccaac gaaccagtgt caccactgac acaatgagga aaaccatgtc
     6061 acatctcgca gaactggttg ccagtgcgaa ggcggccatt agccaggcgt cagatgttgc
     6121 cgcgttagat aatgtgcgcg tcgaatattt gggtaaaaaa gggcacttaa cccttcagat
     6181 gacgaccctg cgtgagctgc cgccagaaga gcgtccggca gctggtgcgg ttatcaacga
     6241 agcgaaagag caggttcagc aggcgctgaa tgcgcgtaaa gcggaactgg aaagcgcagc
     6301 gctgaatgcg cgtctggcgg cggaaacgat tgatgtctcc ctgccaggtc gtcgcattga
     6361 aaacggcggt ctgcatccgg ttacccgtac catcgaccgt atcgaaagtt tcttcggtga
     6421 gcttggcttt accgtggcaa ccgggccgga aatcgaagac gattatcata acttcgatgc
     6481 tctgaacatt cctggtcacc acccggcgcg cgctgaccac gacactttct ggtttgacac
     6541 tacccgcctg ctgcgtaccc agacctctgg cgtacagatc cgcaccatga aagcccagca
     6601 gccaccgatt cgtatcatcg cgcctggccg cgtttatcgt aacgactacg accagactca
     6661 cacgccgatg ttccatcaga tggaaggtct gattgttgat accaacatca gctttaccaa
     6721 cctgaaaggc actctgcacg atttcctgcg taacttcttt gaggaagatt tgcagattcg
     6781 cttccgtcct tcctacttcc cgttcaccga gccttctgca gaagttgacg tcatgggtaa
     6841 aaacggtaaa tggctggaag tgctgggttg cgggatggtg catccgaacg tgctgcgtaa
     6901 cgttggcatc gacccggaag tttactctgg tttcgccttc gggatgggga tggagcgtct
     6961 gactatgttg cgttacggcg tcaccgacct gcgttcattc ttcgaaaacg atctgcgttt
     7021 cctcaaacag tttaaataag gcaggaatag attatgaaat tcagtgaact gtggttacgc
     7081 gaatgggtga acccggcgat tgatagcgat gcgctggcga atcaaatcac tatggcgggc
     7141 ctggaagttg acggtgtaga accggttgcc ggtagcttcc acggcgtggt cgttggtgaa
     7201 gtggttgagt gtgcgcagca tccgaacgct gacaaactgc gtgtgacaaa agtgaatgtc
     7261 ggcggcgatc gcctgctgga catcgtctgt ggtgcgccaa actgccgtca gggcctgcgt
     7321 gtggcggtag ctaccattgg tgctgttctg ccgggtgatt tcaaaattaa agcggcgaaa
     7381 ctgcgtggcg aaccgtctga agggatgctg tgctccttct ctgaactggg aatttctgac
     7441 gatcacagcg gcattatcga actgcctgca gatgcgccga ttggcactga catccgcgaa
     7501 tacctgaaac tcgatgacaa caccatcgaa atcagcgtaa cgccaaaccg tgccgactgc
     7561 ttaggtatca ttggtgttgc gcgtgacgtt gccgtgctga atcagctgcc gctggttgaa
     7621 ccggaaatcg ttccggttgg tgcgaccatc gacgacacgt tgccgattac agtcgaagcg
     7681 cctgaagcct gcccgcgcta tcttggccgt gtggtaaaag gcattaacgt taaagcgcca
     7741 actccgctgt ggatgaaaga aaaactgcgt cgttgcggga tccgttctat cgatgcagtt
     7801 gttgacgtca ccaactatgt actgctcgaa ctgggccagc cgatgcacgc tttcgataaa
     7861 gatcgcattg aaggcggcat tgtggtgcgg atggcaaaag agggcgaaac gctggtgctg
     7921 cttgatggca ctgaagcgaa gctgaatgct gacactctgg tcatcgccga ccacaacaag
     7981 gcgctggcga tgggcggcat ctttggtggc gaacactctg gcgtgaatga cgaaacgcaa
     8041 aacgtcttgc tggaatgcgc tttcttcagc ccgctgtcta tcaccggtcg tgctcgtcgt
     8101 catggcctgc atactgatgc gtctcaccgt tatgagcgtg gcgttgatcc ggcactgcag
     8161 cacaaagcga tggaacgtgc gacccgtctg ctgatcgaca tctgcggtgg tgaggctggt
     8221 ccggtaattg atatcaccaa cgaagcaacg ctgccgaagc gtgcaaccat cactttacgt
     8281 cgtagcaaac tggattgcct gatcggccat catattgctg atgaacaggt aactgacatt
     8341 ctgcgtcgtc tcggctgcga agtgaccgaa ggcaaagacg agtggcaggc agttgcgccg
     8401 agctggcgtt tcgatatgga gattgaagaa gatctggtcg aagaagtcgc gcgtgtttac
     8461 ggctacaaca acatcccgga tgagccggta caggcaagcc tgattatggg tactcaccgt
     8521 gaagctgacc tgtcgctcaa gcgcgtgaaa acgctgctca acgacaaagg ctatcaggaa
     8581 gtgatcacct acagcttcgt tgatccgaaa gtgcagcaga tgatccatcc aggcgttgaa
     8641 gccttactgc tgccaagccc gatctctgtt gaaatgtcag caatgcgtct ttctctgtgg
     8701 accggcctgc tggcaaccgt ggtgtacaac cagaaccgtc agcagaaccg tgtgcgcatt
     8761 ttcgaaagcg gtctgcgttt cgtaccagat actcaggcac cgttgggcat tcgtcaggat
     8821 ctgatgttag ccggtgtgat ttgcggtaac cgttacgaag agcactggaa cctggcaaaa
     8881 gagaccgttg atttctatga tttgaaaggc gatcttgaat ccgttctcga cctgaccggt
     8941 aaactgaatg aggttgagtt ccgtgcagaa gcgaatccgg cactgcatcc ggggcaatcc
     9001 gcagcgattt atctgaaagg ggaacgtatt ggttttgttg gagttgttca tcctgaactg
     9061 gaacgtaaac tggatcttaa cggtcgcact ctggtgttcg aactggagtg gaacaagctc
     9121 gcagaccgcg tggtgcctca ggcgcgcgag atttctcgct tcccggcgaa ccgtcgtgac
     9181 atcgcggtgg tggtcgcaga aaacgttccc gcagcggata ttttatccga atgtaagaaa
     9241 gttggcgtaa atcaggtagt tggcgtaaac ttatttgacg tgtaccgcgg taagggtgtt
     9301 gcggaggggt ataagagcct cgccataagc ctgatcctgc aagataccag ccgtacactc
     9361 gaagaagagg agattgccgc taccgtcgcc aaatgtgtag aggcattaaa agagcgattc
     9421 caggcatcat tgagggattg aacctatggc gcttacaaaa gctgaaatgt cagaatatct
     9481 gtttgataag cttgggctta gcaagcggga tgccaaagaa ctggttgaac tgtttttcga
     9541 agagatccgt cgcgctctgg aaaacggcga acaggtgaaa ctctctggtt ttggtaactt
     9601 cgatctgcgt gataagaatc aacgcccggg acgtaacccg aaaacgggcg aggatattcc
     9661 cattacagca cggcgcgtgg tgaccttcag acccgggcag aagttaaaaa gccgggtcga
     9721 aaacgcttcg cccaaagacg agtaatctga tctaactaaa aaggccgctc tgcggccttt
     9781 tttctttcaa taactaattg atttataatg ttttatatct cttcgttcca cgatgcgtcc
     9841 acatttagtg gggggagggg agtaagcccg ctacattgtg ggctttgtct tatagtctga
     9901 tcactgtttc aagtcggtga ggacaccaaa aagaaccccc gcagttttta cgctgcgggt
     9961 ttgttgttca tgtctgtgag atagggtgcc ttatcgacct taccctggca accgattgac
    10021 gggggattgc tcccccgtcg cggtttcctt actgcttaca ctgtaagaac gccgcaaact
    10081 ccgctcccca gaagctcatc cgtatttcgc acagcgaacc gtgcagcatc cagatgatga
    10141 ggattgccgt cacgcagaac gtgatggccg taagcgattt ttgcgacata gcgcttgctc
    10201 ctttttcggg gaggcgctaa cctatcactt gcttagggta gacggttagg gcctcggtta
    10261 aacaaaaatg ttttccgggg cctttccaca tctggccttc aggtattccc tccgaccatc
    10321 agccgaaagg cacccgcgcg taatctatcg cttttttgtt actccggcaa ttctgctcgt
    10381 taattctgag gtaagggcaa actcatctga ttgtttcctc tgtgtgaagt tggcagttca
    10441 tgcca
//
LOCUS       DADKRT010000153        10372 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.155, whole genome shotgun sequence.
ACCESSION   DADKRT010000153 DADKRT010000000
VERSION     DADKRT010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10372
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.155"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(39..1034)
                     /gene="gapA"
                     /locus_tag="JQ356_003271"
     CDS             complement(39..1034)
                     /gene="gapA"
                     /locus_tag="JQ356_003271"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HAY4623269.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
                     DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
     gene            1376..1789
                     /gene="msrB"
                     /locus_tag="JQ356_003272"
     CDS             1376..1789
                     /gene="msrB"
                     /locus_tag="JQ356_003272"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HAY4623270.1"
                     /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
                     HCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING"
     gene            1831..2103
                     /locus_tag="JQ356_003273"
     CDS             1831..2103
                     /locus_tag="JQ356_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707337.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HAY4623271.1"
                     /translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
                     VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
     gene            complement(2264..2905)
                     /gene="pncA"
                     /locus_tag="JQ356_003274"
     CDS             complement(2264..2905)
                     /gene="pncA"
                     /locus_tag="JQ356_003274"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HAY4623272.1"
                     /translation="MPHRALLLVDLQNDFCAGGALAVPEGDSTVEVANRLIDWCQSRG
                     EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQ
                     KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT
                     VLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG"
     gene            complement(2916..3932)
                     /gene="ansA"
                     /locus_tag="JQ356_003275"
     CDS             complement(2916..3932)
                     /gene="ansA"
                     /locus_tag="JQ356_003275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HAY4623273.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
                     EMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY
                     PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
                     KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
                     TPDD"
     gene            complement(4099..5955)
                     /gene="sppA"
                     /locus_tag="JQ356_003276"
     CDS             complement(4099..5955)
                     /gene="sppA"
                     /locus_tag="JQ356_003276"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707347.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HAY4623274.1"
                     /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
                     VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
                     TIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
                     YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGLTKTGGDTAKYA
                     LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
                     GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
                     HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
                     GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
                     SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
     gene            6116..6667
                     /locus_tag="JQ356_003277"
     CDS             6116..6667
                     /locus_tag="JQ356_003277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HAY4623275.1"
                     /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP
                     WHFFVIEGEGRERFSAILEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKV
                     PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
                     GTPQLKASTSINVPDPTPFVTYF"
     gene            6784..7827
                     /gene="selD"
                     /locus_tag="JQ356_003278"
     CDS             6784..7827
                     /gene="selD"
                     /locus_tag="JQ356_003278"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HAY4623276.1"
                     /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
                     IEGVKAMTDVTGFGLLGHLSEMCQGAGVQACVDYDAIPKLPGVEEYIKLGAVPGGTER
                     NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGEL
                     VPARGGRAMVEIR"
     gene            7832..9793
                     /locus_tag="JQ356_003279"
     CDS             7832..9793
                     /locus_tag="JQ356_003279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HAY4623277.1"
                     /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
                     DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
                     TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA
                     INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL
                     GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
                     SADKKKAAPRKRSAKKSPPADEVGSGAIA"
     gene            9920..>10372
                     /locus_tag="JQ356_003280"
     CDS             9920..>10372
                     /locus_tag="JQ356_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623278.1"
                     /translation="MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGF
                     YLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQ
                     AKGIEPLSIEKLQALQLITPYRFYHKQWSETLEFWPRKPEPGKDTFQYH"
BASE COUNT         2612 a         2535 c         2735 g         2490 t
ORIGIN      
        1 ccgaagtcgc tctttttaga tcacagtttc atctcaactt atttggagat gtgagcgatc
       61 aggtccagaa ctttgttgga gtaaccggtt tcgttgtcgt accaggatac cagtttcacg
      121 aagttgtcgt tcagagcgat accagcttta gcatcgaaca cggaagtgca aacttcgccg
      181 ttgaaatcgg tagatactac gtcatcttcg gtgtagccca gaacgccttt catttcgcct
      241 tcagcagcgg ctttaacggc agctttgatc tgctcgtaag ttgcagcttt ttccagacga
      301 acggtcaggt caactacgga tacgttcggg gtcggaacgc ggaacgccat accagtcagt
      361 ttgccattca gttctggcag tactttacct acagctttag cagcaccggt agaggacggg
      421 atgatgttct gggaagcgcc gcggccgccg cgccagtctt tgtgagacgg gccatcaacg
      481 gttttctgag tagcggtagt agcgtgaacg gtggtcatca gaccttcgat gatgccgaag
      541 ttatcgttga taactttagc cagcggagcc aggcagttgg tggtgcagga agcgttggaa
      601 acgatgtcct ggccagcata tttgtcgaag ttagcgcctt taacgaacat cggagtgttg
      661 tctttagacg gaccagtcat aaccactttc ttcgcaccag cggtgatgtg tttacgagca
      721 gtttcgtcag tcaggaacag accagttgct tcagcgacaa cgtcaacacc aacttcgtcc
      781 catttcaggt tagccggatc acgttcagcg gtaacacgga tttttttacc gttaacgatc
      841 agatgaccgt ctttcacttc aacggtaccg tcgaaacggc cgtgagtgga gtcatatttc
      901 agcatgtatg ccatgtaatc agcgtctaac aggtcgttga ttgcaacgat ctcgatgtca
      961 gaacgtttct gagcagcacg gaaaacaatg cgaccgatac ggccaaaacc gttgatacct
     1021 actttgatag tcatatattc caccagctat ttgttagtga ataaaaggtt gcctgtaaaa
     1081 ttacaaaaac cttacgcagc gtcaagcgga atcgtgtcaa tcattgcgac aaatcaatcc
     1141 tgtgcctaag cattacgcga ctgactcgcc tcactcttcc tttgggcttg aaaccacatg
     1201 gggtcggcgc cccgaatttt aaagggcaat tacgataaaa atgtgatttt catcacgatt
     1261 taggtgcagc catttcgtcg agatcaagtt taggacaaaa ttttgccagt tggtgttaat
     1321 gttttgttag aatcagtcac gtaatgtgag cacgattaaa gtgagatgtg agcaaatggc
     1381 taataaacct tcggcagaag aactgaaaaa aaatttgtcc gagatgcagt tttacgtgac
     1441 gcagaatcat gggacagagc cgccatttac ggggcgttta ctgcataaca agcgtgacgg
     1501 cgtatatcac tgtttgatct gcgatgcccc gctgtttcat tccgaaacca agtatgattc
     1561 cggctgtggc tggcccagtt tctacgaacc ggtgagtgaa gaatccattc gttatatcaa
     1621 agacttgtca catggaatgc agcgcataga aattcgttgc ggtaactgtg atgcccatct
     1681 ggggcatgtc tttcccgacg ggccgcaacc aacaggcgaa cgttattgtg ttaactctgc
     1741 ttctttacgc ttcactgatg gcgaaaacgg cgaagaaatc aacggttgaa aaaacgattc
     1801 agcaacttat tccacaggag cggaaaaatt atgaatcttg atgacattat caacagcatg
     1861 acgcctgagg tataccagcg tttgtcgacc gccgttgaac tggggaaatg gcctgatggc
     1921 gttgcgttga ccgaggaaca aaaagagaat tgcctgcaac tggtgatgct gtggcaagcc
     1981 cgccataata ccgaagcaca gcatatgaca attgacacaa atggtcagat ggtcatgaag
     2041 agcaaacagc agttaaaaga agattttggt atctcagcaa agcctattgc tatgtttaag
     2101 tgaatgagtt atctagtatt taagcctgtt attaagggag ggcaaatata cttgttcgga
     2161 cgtcgtgttt tagctgcaag taggttaaat gcaacactga caagtattat ctggcctaca
     2221 atgtcattga ggaaatgtag gccagagatg aattcaacta atattacccc tgtgtctctt
     2281 cccagtctgc cagcgtatat agcgttgccc cagctgctga catctccata aacgcgtgtg
     2341 cactgtcctg gggctggata ttcacgccac gacaaccatc ggtaatcacg ttcaccttat
     2401 aacctaactg taacgcgtcc agcacggtaa acttcacgca atagtcagta gccaggccca
     2461 taacgatcaa ttcatcgatt tcatgatcgc gtaaccagtc atcgagagag gttttctgcc
     2521 gacggccgtt atcaaaaaag gcactgtaac tgtcaactaa aggattttcg cctttatgga
     2581 acaccgctgc gatcgctttt tggttcagta acggatgtaa ttgtgcgcct tcactgttct
     2641 gcacacagtg atctggccag aaggtttgtg gcaaaccgtc gagttggcct ggcgtataag
     2701 gctctacacc gtgctgactg gcaaaactgc cgtgattcgc cggatgccag tcctggctgg
     2761 cgataaccgc ttctccgcgc gactggcacc agtcaataag gcggttagca acctccaccg
     2821 tactgtcacc ttccggtacg gcgagcgcgc caccagcaca gaaatcattt tgtaaatcga
     2881 ccagtaacag ggcgcgatgg ggcattgcag tctccttaat catccggcgt cagttcgccg
     2941 cgcaggtttt ggctcatggc cttgcgaatg gtttcagtat ccagttcctg gctcagcagg
     3001 taatgcagtt tggttagcgt ggcttctaca gtcatatctg caccgccaat aacgccggca
     3061 tgggcgaggg cgttaccggt ggcataacca cccatattca ctttaccgga catacattgt
     3121 gtcaggttga ccaccacaat accgcgatcg ctggcttctt gtaattcctg caggaaggct
     3181 ttgttttgtg gcgcattacc cacgccatag gagcgcagaa tcaatgcttt cactggttgg
     3241 cgcagaaaat tgcgcacgac atcagcagaa atccccggat aaatcgtcac tacgccaatt
     3301 ggttgtggcg tgattggatg aacgattaat tccccttcac cgtgcggggc gggtggcgta
     3361 ttcaaacgac gaatatggat accagcttcc agtaacggag gaaggtttgg agaggcaaac
     3421 gcatcaaaac catcggcatg ggctttggta gtgcggttgc cgcgatacaa tcggttattg
     3481 aaaaagagcg ttacttcgtt gatcggataa ttcgccgcaa cgtacaacgc attcagcaga
     3541 ttaatttgtc cgtcagagcg taactcagcc agcgggattt gtgaccctgt cacaatgacc
     3601 ggtttaccga gattctcgag catgaacgac agcgcagagg cggtatacgc catcgtgtcg
     3661 gtaccgtgta gaatgacaaa accatcatag tcgtcatagt gcgctttaat atcttcagca
     3721 atatgctgcc agtcatccgg cgtcatatca gaagaatcca tcaacggcgt atattcatga
     3781 atggtgaaat ctggcatctc cgggcgatgg aattccggca tcagcgccag ttggcgttgt
     3841 agatgacctg acaccggaat ataaccctgc tcggaacgct gcatcccgat ggtcccgccc
     3901 gtgtaggcga cgtaaattga tttcttttgc atgatattga tatgaatgat atcgaaagag
     3961 caaaagtata tacgtgaggc aggaggagcg cacctgatac tatgcggata aggaaatatg
     4021 gggcgagaca gcgggaagag gattcgtcga ggtaaaaaat aatgtggccg acgatctgtc
     4081 ggccactcag tacaagactt aacgcacgtt ggcgcaggtc aggcaaaacg cataacggtt
     4141 ttgtgggtcg ttaaacgcgg ccagcttgtc gctttcactt ttaacggtag aggctaccga
     4201 ggcaagcggt gcaggtaaca tggcctggaa cgcatctggc aacattgccc ggacagaacc
     4261 agacatgttg tccatcactt tgtcgaagaa ggtcggttca tcaacgtagt attccagatg
     4321 ccactgtttc acttttgcga gctctgctgc tttggcaacc gcatcatcga aatccccgag
     4381 actatcgacc agcccgttag cttttgcatc ctgaccggtc cagacgtggc cctgggcgat
     4441 tttatcaatt tgctccggcg tcgaatgacg cgcatcagca accagcgtga taaagcgttt
     4501 atagccattc tcaatgctta attgcatcat ctgctgcgct tccggcggca gtgccctggt
     4561 gatagaaaca tccgccagcg gtgaagttga gacaccatca gtatgaacac caatcgaatc
     4621 cagactattt tctacggtgg tgatcacgcc gaagataccg atagaaccgg tcagggtgct
     4681 ggggttagcc acaatgtaat tagctggcgt ggaaatccag taaccaccag atgccgccat
     4741 gccgcccatc gatacaacca caggcttacc cgctgcccgg gctgctgcca gttcagcgcg
     4801 aatcacttca gacgcggtaa cgctgccgcc tgggctatta acacgcagga caatcgcttt
     4861 cactttcggg tcaaggcgag cgtcgcggat ttgtgccgca gtggtatcac cgccaacatt
     4921 cccctgagtt tcctcgccat ccataattgc gccattagcg aagacgacac cgatgctgtc
     4981 accggtatct gccggcgttt tcaatgcgta atcgtaataa ctgatggcgc gataattttt
     5041 atcagtctta ctccagccga actctttggt cagagctttt tcgatttcgg cactcgatgc
     5101 cagtgcatcg accagcttgt tttccagtgc atatttcgcg gtatcgccac cggttttggt
     5161 taaaccctca agcaaccctt gcgcgctagg gaatacctgc tgagcaggga tctgtcggtt
     5221 agcggcaaca gtattcagat agttttgcca cagctcacca atccagcggc tgtcagcttc
     5281 gcgggctgcc ggtgacatat catcacgaat aaacggttca acggcagatt tatacgtacc
     5341 cacgcggaac acatgggtgg aaactttcag cttatccagc aacgatttgt agtacagacc
     5401 gttggtagca aaaccgtgca gatcaaccac gccttgcggt gacagccaaa ttttattggc
     5461 gaaactggcg agataatatt gcccctggct gtagttctcg ccaacggcat aaaccggttt
     5521 cccgctgtca cgaaactctt tcagggcttt gccgatgtac tgcatagacg gctggtcgcc
     5581 gcctgcgaag tttttcagat ccatcacgat accggtgata ttgtggtcgt ccttcgcctg
     5641 gcgaatggtg ttgacgatat caaacagtga gttttcctgc agacgatcgg aactggcacc
     5701 aagcagctgg cggcttaatt tactaaaccg ctgagaactg tcgggtttat cgacgatcac
     5761 accggaaatg tccagcagca gtgcgccacg actggccgtt tctttcgaat caccaccact
     5821 gacctgcatc cagatcccca caccaaccag tacgaggaaa ataaagaaca ggttaagtac
     5881 catttcacgg acgaaattca gcagacgcca cgtccattta aaaaatccgg caataaatcg
     5941 ccaaagggtt cgcatgtatt ctcccaactt aaggtcacac ctgtcacagg cgcaatagat
     6001 gtggttatcg taatgaccca accgacactt gtcagcagga attgcggact gtgctgtaac
     6061 aaaatccact ctcgtgttaa ttttgtgaat aaatatcacg acaggagtta atcaaatgga
     6121 tgcactcgaa ctattgatca atcgccgtag cgcctcccgc ctggctgaac ccgcgccaac
     6181 gggtgaacaa ctgcaaaaca tcctgcgtgc gggtatgcgt gcgccggacc ataagtccat
     6241 gcaaccgtgg catttttttg tgattgaagg ggaagggcgc gagcgtttca gcgccatact
     6301 ggaacagggg gcgattgctg ccggtagtga tgacaaagct atcgacaaag cccgtaatgc
     6361 gccgttccgc gcaccgctca tcatcacggt ggtggcgaaa tgcgaagaaa atcataaagt
     6421 cccgcgatgg gaacaggaaa tgtctgccgg atgcgcggtc atggcgatgc aaatggcagc
     6481 cgttgcccag ggatttggcg gcatctggcg cagtggcgca ttaactgaaa gtccggtagt
     6541 gcgtgaagca ttcggttgcc gtgagcagga taaaattgtc ggttttctct acctcggcac
     6601 gccgcagttg aaagcatcta cgtcgattaa cgtcccggac ccgacgccgt ttgtaactta
     6661 tttctgataa ttgtcgcgaa actgtctgga ttgtgagcaa aggcgcagga attcagacac
     6721 tctcacttat cacttcacgg aatgagggtt accatacccg gattgcattg acaggagatg
     6781 tccatgagcg agaactcgat tcgtttgacc caatacagcc acggagctgg ttgcggctgt
     6841 aaaatttccc caaaagtgtt ggaaaccatc ctgcacagtg agcaggcgaa gtttgttgat
     6901 ccgaatttgc ttgtgggtaa tgagacccgc gacgatgcgg cggtgtacga tctgggcaat
     6961 ggcaccagcg ttatcagtac caccgacttc tttatgccga tcgttgataa tcctttcgat
     7021 tttggccgca ttgcggcgac taacgccatc agcgatatct tcgcgatggg gggcaaaccg
     7081 attatggcga ttgcgatcct cggctggccg attaacaaac tttccccgga aattgcccgc
     7141 gaagtaaccg aaggtggacg ctatgcatgc cgtcaggcgg gtattgcgct ggctggcggt
     7201 cactccatcg atgcgccgga gccgattttt ggtctggcgg taacggggat cgtaccgacc
     7261 gagcgggtga agaaaaacag caccgcacaa gccggatgca aactgttcct gacgaaaccg
     7321 ctggggatcg gcgttcttac cacggctgag aaaaaatcac tgctgaaacc agaacatcag
     7381 ggactagcga cggaagtgat gtgccggatg aacatcgcag gcgcgtcctt tgccaacatc
     7441 gaaggcgtaa aagcgatgac cgacgttacg ggctttggtc tgctgggcca tttgagcgaa
     7501 atgtgtcagg gcgcaggtgt gcaggcgtgc gttgactatg acgcgatccc aaaattgccg
     7561 ggggttgaag agtacattaa gttgggcgca gtgcctggcg gcaccgaacg taactttgcc
     7621 agctacggtc atctgatggg tgaaatgccg cgtgaagtgc gcgatttgct gtgcgatccg
     7681 caaacttctg gcggtttgct gctggcggtc atgccggaag cagaaaatga ggtcaaagct
     7741 acagccgccg agtttggcat tgaactgacg gcaattggcg aactggtgcc agcgcgcggc
     7801 ggtcgtgcca tggttgagat tcgttaattc aatgcggttg tttattgccg aaaaaccgag
     7861 tctggcgcgc gccattgctg atgtcctgcc caaaccgcac cggaaaggcg atggctttat
     7921 cgagtgcggt aatggtcagg tggtgacctg gtgtatcggt cacctgcttg agcaggcgca
     7981 gccagacgcc tacgacagcc gctatgcgcg ctggaatctt gcggatttgc cgattgtccc
     8041 ggaaaagtgg caattacagc cccgaccctc cgtgaccaaa caacttaacg tcatcaaacg
     8101 cttcctgcat gaagccagcg aaatcgttca cgccggggac ccggatcgtg aagggcaact
     8161 gctggtggat gaagtgctgg actatctgca actggcaccg gaaaagcgcc agcaggtgca
     8221 gcgttgcttg ataaacgacc tgaacccgca ggcggttgag cgggcgatcg accgtcttcg
     8281 gtccaacagt gagtttgtgc cattgtgcgt ttctgcgctg gcgcgagcgc gtgccgactg
     8341 gctgtacggc atcaatatga cccgtgcgta taccattctc ggtcgcaatg ccggttatca
     8401 gggcgtactt tccgtgggac gcgtgcagac acccgtgctc gggctggtgg tgcgccgcga
     8461 tgaagagatt gaaaacttcg tggcgaaaga cttctttgaa gtcaaagcac atatcgtgac
     8521 acctgccgat gagcggttta ccgctatctg gcaaccgagc gaagcgtgtg aaccgtacca
     8581 ggatgaagaa gggcgcttgt tacatcgtcc actggcggag catgtggtta accgcattag
     8641 tggtcaacca gcaattgtca ccagctataa cgataaacgg gaatcagaat ccgcgccgct
     8701 gcctttttcg ctttcggcgt tgcagattga agcggcaaaa cgctttggtc tgagcgcgca
     8761 gaacgtgctt gatatctgcc agaagctgta cgaaacgcac aagctaatca cttatccgcg
     8821 ttccgattgt cgctatttgc cagaagaaca ttttgccgga cgccacgcgg tgatgaatgc
     8881 catcagcgtt catgcaccag atctgttgcc gcaaccagtg gtagatccag atatacgcaa
     8941 ccgctgttgg gatgacaaaa aggtcgatgc acaccacgcc atcatcccga ccgcacggag
     9001 ttctgcgatc aacctgacgg agaacgaagc gaaggtctat aacctgattg cccgtcagta
     9061 cttgatgcag ttctgcccgg atgcggtgtt ccgcaagtgt gttatcgaac tggacattgc
     9121 caaaggcaaa tttgtcgcta aagcgcgttt tcttgctgaa gcaggctggc gcacgctgtt
     9181 aggcagcaaa gagcgcgatg aagaaaacga cggtacgcca ttgcctgtgg tggcgaaagg
     9241 cgatgagttg ctgtgtgaaa aaggtgaagt ggtagagcgg caaacccagc cgccgcgcca
     9301 ttttaccgat gcaacactgc tttcggcgat gaccgggatc gcgcgctttg tgcaggacaa
     9361 agatctgaaa aagatccttc gtgcgaccga tggtctgggg acagaagcaa cccgtgccgg
     9421 gattattgaa ctgctgttca agcgtggttt tctgaccaaa aaagggcgct atatccactc
     9481 taccgacgcc ggaaaagcgt tattccattc gctgccagaa atggcgacgc gaccggacat
     9541 gaccgcgcac tgggaatcgg tgctgacgca aatcagcgaa aagcagtgtc gctatcagga
     9601 ctttatgcag ccgctggtgg ggacgctata tcagcttatt gatcaagcca aacgtacgcc
     9661 ggtgcggcag tttcgcggca ttgtggctcc gggcagtggt ggcagtgctg ataagaaaaa
     9721 ggctgcaccg cgtaaacgta gtgcgaaaaa aagtccgcca gcagatgaag tcggaagcgg
     9781 ggcgatagcg taagcgagtg aatctttcgt gctattcgag tcatattctg aaatatccag
     9841 cgaatcaaga aaattcgttg gatatttttt tgcatggata aaattatcgc ctctaaagta
     9901 tgtaataaca gggaatgtga tgaaaaaagt tttattacaa aaccatcctg ggagcgagaa
     9961 gtattctttt aatggctggg aaatatttaa tagtaatttt gaacggatga ttaaagaaaa
    10021 taaggccatg ctgctttgta agtgggggtt ttatttaaca tgtgttgtcg ctgtaatgtt
    10081 tgtgttcgca gcgataacat ccaacggttt gaatgaaaga ggcctgatta ccgcgggatg
    10141 ctcttttctt tatctattaa ttatgatggg gcttattgtt cgggccggtt ttaaagcaaa
    10201 aaaagaacaa ctgcattatt atcaggctaa aggtattgag ccgctcagta tcgagaagtt
    10261 acaggcgcta caattgatca caccttatcg attctatcat aagcaatggt ctgaaacgct
    10321 ggagttctgg ccgcgaaagc ctgaacctgg caaagatacc ttccaatatc at
//
LOCUS       DADKRT010000154        10330 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.156, whole genome shotgun sequence.
ACCESSION   DADKRT010000154 DADKRT010000000
VERSION     DADKRT010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10330
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.156"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            121..987
                     /gene="folD"
                     /locus_tag="JQ356_003281"
     CDS             121..987
                     /gene="folD"
                     /locus_tag="JQ356_003281"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HAY4623279.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQACIAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLP
                     AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
                     DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
                     QACVEYHDPQGE"
     gene            989..1201
                     /gene="ybcJ"
                     /locus_tag="JQ356_003282"
     CDS             989..1201
                     /gene="ybcJ"
                     /locus_tag="JQ356_003282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308617.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HAY4623280.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA
                     VETRKRCKIVAGQTVSFAGHSVQVVA"
     gene            1309..1830
                     /locus_tag="JQ356_003283"
     CDS             1309..1830
                     /locus_tag="JQ356_003283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY4623281.1"
                     /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS
                     FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSL
                     LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
                     GMVLMEMLWWRRR"
     gene            complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JQ356_003284"
     CDS             complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JQ356_003284"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HAY4623282.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
                     LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
                     DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAG
                     GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
                     LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
                     DGPQGTTWRRK"
     gene            3425..3919
                     /gene="ppiB"
                     /locus_tag="JQ356_003285"
     CDS             3425..3919
                     /gene="ppiB"
                     /locus_tag="JQ356_003285"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HAY4623283.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     VDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV
                     TVSE"
     gene            3922..4644
                     /gene="lpxH"
                     /locus_tag="JQ356_003286"
     CDS             3922..4644
                     /gene="lpxH"
                     /locus_tag="JQ356_003286"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HAY4623284.1"
                     /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE
                     AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
                     LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANS
                     KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
                     WHTEGSMVKVTADDVELIHFPF"
     gene            4762..5271
                     /gene="purE"
                     /locus_tag="JQ356_003287"
     CDS             4762..5271
                     /gene="purE"
                     /locus_tag="JQ356_003287"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HAY4623285.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA
                     HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
                     SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL
                     ENPDPRGAA"
     gene            5268..6335
                     /gene="purK"
                     /locus_tag="JQ356_003288"
     CDS             5268..6335
                     /gene="purK"
                     /locus_tag="JQ356_003288"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HAY4623286.1"
                     /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
                     VITAEIERWPETVLTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
                     RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSG
                     EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG
                     YMGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV
                     NNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
                     LIPLLPPEYASGVIWAQSKFS"
     gene            complement(6472..7363)
                     /locus_tag="JQ356_003289"
                     /pseudo
     CDS             complement(6472..7363)
                     /locus_tag="JQ356_003289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706399.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
     gene            complement(7360..8175)
                     /locus_tag="JQ356_003290"
     CDS             complement(7360..8175)
                     /locus_tag="JQ356_003290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HAY4623287.1"
                     /translation="MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR
                     QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP
                     SHPQPLAAAWMQRAEETGLFGPLAMAASDPLTTELRQFRHCFQAALNGVKTDWRHWLG
                     KGPGLTPSHDDTLSGMLLAAWYYGALDARAGRPFFACSDNLQLVTTAVSVSYLRYAAQ
                     GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP"
     gene            complement(8186..9445)
                     /locus_tag="JQ356_003291"
     CDS             complement(8186..9445)
                     /locus_tag="JQ356_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009029994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HAY4623288.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPAFSLISELNEGKTLLH
                     AGPPMRWQEMTGPMKGACVGGCLFEGWAKDEAQALAMLEQGEVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS
                     AALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRTLAPQIARLDHDKQHIAEV
                     IDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFT
                     APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR
                     AVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGIG"
     gene            complement(9455..10279)
                     /gene="fdrA"
                     /locus_tag="JQ356_003292"
                     /pseudo
     CDS             complement(9455..10279)
                     /gene="fdrA"
                     /locus_tag="JQ356_003292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314544.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
BASE COUNT         2274 a         2933 c         2772 g         2351 t
ORIGIN      
        1 aaccttcgca agaggtcgct tcacgcgata aatctgaaac gaaacctgac agcgcgcccc
       61 gcttctgaca aaataggcgc atccccttcg acctacgtaa cagatggaat cctctctctg
      121 atggcagcaa agattattga cggtaaaacg attgcgcagc aggtgcgctc tgaagttgct
      181 caaaaagttc aggcgtgtat tgcagccgga ctgcgggcac caggactggc cgttgtgctg
      241 gtgggtagta accctgcatc gcaaatttat gtcgcaagca aacgcaaggc ttgtgaagaa
      301 gtcgggttcg tctcccgctc ttatgacctc ccggaaacca ccagcgaagc ggagctgttg
      361 gagcttatcg atgcgctgaa tgccgacaac accatcgatg gcattctggt tcaactgccg
      421 ttaccggcgg gtattgataa cgtcaaagtg ctggaacgta ttcatccgga caaagacgtg
      481 gacggtttcc atccttataa cgtcggtcgt ctgtgccagc gcgcgccgcg tctgcgtccc
      541 tgcaccccgc gcggtatcgt cacgctgctt gagcgttaca acattgatac cttcggcctt
      601 aacgccgtgg tgattggcgc atcgaatatc gtcggtcgtc caatgagcat ggaactgttg
      661 ctcgcaggtt gcaccactac cgtgactcac cgtttcacta aaaatctgcg tcaccacgta
      721 gaaaatgccg atctgttgat cgttgccgtc ggcaagccgg gctttattcc tggtgactgg
      781 atcaaagaag gcgcaattgt gattgatgtc ggcatcaacc gtctggaaaa tggcaaagtt
      841 gtgggcgacg tcgtgtttga agacgcggct aaacgcgcct catacattac gcctgttccg
      901 ggcggcgttg gcccgatgac ggttgccacg ctgattgaaa acacgcttca ggcgtgcgtt
      961 gaatatcatg atccacaggg tgagtaacat ggcgacattt tctttaggta aacatccgca
     1021 cgttgagctg tgcgatttgc tgaaactgga aggctggagc gaaagcggcg cgcaggcgaa
     1081 aatcgcgatt gccgaaggcc aggtgaaagt cgacggtgcg gttgaaacgc gcaaacgctg
     1141 caaaatcgtc gccggtcaga cagtgagttt tgcaggtcac agcgtacagg ttgttgcctg
     1201 atccctttcc cggcctgtat caacaggccg gttctctttt cagacttttg ccctctacgc
     1261 cccgttcatc catgctgata gcatcgacat tttgccgaag cgaccatcat gccaaccgtt
     1321 attacgcacg ccgccgttcc cctatgcatt ggtttagggt tgggttcgaa agtcatccct
     1381 ccgcgtctgt tatttgccgg aatcatcctg gcgatgctgc ccgacgccga cgtattgtcg
     1441 tttaaatttg gcgttgctta cggcaatgtt tttggtcatc gcgggtttac ccattcgctg
     1501 gtgtttgcgt ttgttgtccc gctgttatgt gtgctgattg gacgccgatg gttcagggct
     1561 gggcttattc gctgctggct gtttttaacc gtctcgttgc tatcgcacag cttgctggat
     1621 tcggtaacca ctggcggtaa gggcgttggc tggctgtggc cgtggtcaga tgaacgcttt
     1681 ttcgctccct ggcaggtgat taaagtcgcg ccgtttgcat tgtctcgtta caccacgccg
     1741 tacgggcatc aggtgataat ttctgaattg atgtgggtgt ggttgccggg gatggtgctt
     1801 atggaaatgt tgtggtggcg caggcgataa ccggatgcga aaactcgcat ccggcaacag
     1861 cgcaattact tacgacgcca ggtggtccct tgcgggccat cttccagcac gatccccatc
     1921 tcgttaagac ggtcacgcgc cgcatctgcc gccgcccagt ctttcgcttt acgggcatcc
     1981 agacgctgtt gaattaacgc ttcaatctca gccacttcgc tgtcgtctgc ctgcgcgccg
     2041 ctttgcagga acgcttccgg ttcttgctcc agcaggccca atacagcgga aagtttacgc
     2101 aggtgagatg ccattgcatt cgccgctgcc atatcttctg ctttcagacg gtttacttca
     2161 cgcgccatat caaacagtac ggaataggct tccggggtgt tgaaatcgtc gtccatcgct
     2221 tcaataaagc gcgcttcaaa cgcttcgcca ccggcaggcg caacggtttt atctgtgccg
     2281 cgcagcgcag tgtagagacg ctccagcgcc gcacgcgtct gcttcaggtt ctcttcgctg
     2341 tagttcaact ggctgcgata gtggcccgac atcaggaagt aacgcacggt ttccgcgtcg
     2401 tagtatttca gcacatcgcg cacggtaaag aagttaccca gcgatttgga catcttctcg
     2461 cggtcaacca tcaccattcc ggagtgcatc cagtagttca catactgacc atcatgggca
     2521 caggtggact gcgcgatttc gttctcgtgg tgcgggaaca tcaggtctga accgccgccg
     2581 tggatatcaa agtggttacc cagctgcttg cagttcatgg ccgaacattc aatgtgccag
     2641 ccaggacgac ccgcgcccca cggagacggc cagctcggtt cgccctcttt cgacatcttc
     2701 cacagaacga agtccatcgg gttgcgtttg tcatcaacca cgtcaacgcg cgcgccagcc
     2761 tgcagctggt cgagatcctg acgcgacagc acgccataag tcggatcggt cgggacgtcg
     2821 aacatcacgt cgccgttgtc agccacataa gcgtgacctt tggcgatcag ttgttcagtg
     2881 agttcaataa tttctgcgat atggtgcgtc gcgcgcggct ccatatccgg gcgcagaatg
     2941 ttcaaagcat caaaatcttt gtgcatttcg gcgatcatgc gatccaccag cgccacaaag
     3001 ctttcgccat tttcattggc gcgtttgatg attttgtcgt cgatatcggt aatgttgcgc
     3061 acatacttca gcttatagcc gaggaaacgc agatagcgcg caaccacgtc aaaagcaaca
     3121 aaggtacgcc cgtgaccgat atgacagaga tcgtaaacgg tgattccaca cacgtacatg
     3181 ccgacttccc cggcgtgaat aggcttaaat tcctcttttt ggcgtgtcag agtattgaag
     3241 atttttagca tcgaagattc cgtttagaca tgtgtgggta attgagttgc gtataatacc
     3301 catatttccc gcgcgaatca gcatacattg cgtgatgatc cgatcgtgcg gttatgctat
     3361 aacaccaccc tatatatgac ccgaaccggg ttgaagcacc aatcaaacgg aacaggatgc
     3421 aaaaatggtt actttccaca ccaatcacgg cgatattgtc atcaaaactt ttgatgataa
     3481 agcacctgaa acagttaaaa acttcctgga ctactgccgc gaaggttttt acaacaacac
     3541 cattttccac cgtgttatca acggctttat gattcagggc ggcggttttg aaccgggcat
     3601 gaaacaaaaa gccaccaaag aaccgatcaa aaacgaagcc aacaacggtc tgaaaaatac
     3661 ccgtggtacg ctggcaatgg cccgtactca ggctccgcac tctgcaactg cacagttctt
     3721 catcaacgtg gttgataacg acttcctgaa cttctctggc gaaagcctgc aaggttgggg
     3781 ctactgcgtg tttgctgaag tggttgaagg catggacgtg gtagacaaaa tcaaaggtgt
     3841 tgcaaccggt cgtagcggta tgcaccagga cgtgccaaaa gaagacgtta tcattgaaag
     3901 cgtgaccgtt agcgagtaat cgtggcgaca ctctttattg cagatcttca tctctgcgtg
     3961 gaagaaccgg cgatcaccgc cggttttctg cgttttttag cgggggaagc tcgcaaggcc
     4021 gacgcgctgt atattcttgg cgatctgttt gaagcgtgga ttggcgacga cgatcccaat
     4081 ccactccatc gccagatggc ggcagcgatc aaagcggtgt ccgattccgg cgttccctgt
     4141 tatttcattc atggcaaccg tgattttctg ctcggcaaac gctttgcccg tgaaagtggc
     4201 atgacgttat tgccggaaga aaaggtgctc gaactttatg gccgccgggt gttgattatg
     4261 catggcgaca cgctgtgcac cgatgacgcg ggttatcagg cttttcgcgc caaagtccac
     4321 aaaccctggc tgcaaatgct attcctcgcc ctgccgttgt ttgtgcgcaa acgcattgcc
     4381 gcgcgaatgc gcgcgaacag caaagaagcc aacagcagta aatcgctggc gatcatggac
     4441 gttaaccaaa acgcagtggt cagtgcgatg gaaaaacatc aggtgcaatg gctgatccac
     4501 gggcataccc atcgcccggc ggtgcatgaa cttatcgcca accagcaacc tgcttttcgc
     4561 gtggtactgg gtgcctggca tacggaaggt tcgatggtga aagtcacggc ggatgacgtt
     4621 gagctgattc attttccgtt ttaaaaaaac cacaactttg ctgattttac agccacgcaa
     4681 ccgttttcct tgctctcttt ccgtgctatt ctctgtgccc tctaaagccg agagttgtgc
     4741 accacaggag ttttaagacg catgtcttcc cgcaataatc cggcgcgtgt cgccatcgtg
     4801 atggggtcca aaagcgactg ggctaccatg cagttcgccg ccgaaatctt cgaaatcctg
     4861 aatgtcccgc accacgttga agtggtttct gctcaccgca cccccgataa actgttcagc
     4921 ttcgccgaaa gcgccgaaga gaacggttat caggtgatta ttgcgggcgc aggtggcgca
     4981 gcgcacctgc caggcatgat tgccgccaaa acgctggtgc cggtgctggg cgtgccagta
     5041 cagagcgccg cactgagcgg tgtcgatagc ctctactcca tcgtacaaat gccgcgcggc
     5101 attccggtgg gtacgctggc gattggtaaa gctggcgcgg caaacgcggc attactggca
     5161 gcacaaattc tcgcgactca cgataaagag ctacaccagc gtctgaatga ctggcgcaaa
     5221 gcccagaccg acgaagtgct ggaaaatccg gacccgcgag gtgcggcatg aaacaggttt
     5281 gcgtcctcgg taacgggcag ttaggccgta tgctgcgtca ggcaggcgaa ccgttaggca
     5341 ttgctgtctg gccggtcggg ctggacgctg aaccggcggc ggtgcctttt caacaaagcg
     5401 tgattaccgc tgagatcgaa cgctggccgg aaaccgtatt aacccgcgag ctggcgcgtc
     5461 atccggcctt tgtgaaccgc gatgtgttcc cgattattgc tgaccgtctg actcagaagc
     5521 agcttttcga taagctccac ctgccgaccg cgccgtggca gttacttgcc gatcgcagcg
     5581 agtggcctgc ggtgtttgat cgtttaggtg aactggcgat tgttaagcgt cgcactggtg
     5641 gctatgacgg tcgcggtcaa tggcgtttac gcgccaatga aaccgaacag ttaccggcag
     5701 agtgttacgg cgaatgtatt gtcgagcagg gcattaactt ctctggtgaa gtgtcgctgg
     5761 ttggcgcgcg cggctttgat ggcagcaccg tgttttatcc gctgacgcat aacctgcatc
     5821 aggacggtat tttgcgcacc agcgtcgctt ttccgcaggc caacgcacag cagcaggcgc
     5881 aagccgaaga gatgctgtcg gcgattatgc aggagctggg ctatatgggc gtgatggcga
     5941 tggagtgttt tgtcaccccg caaggtctgc tgatcaacga actggctccg cgtgtgcata
     6001 acagcggtca ctggacacaa aacggtgcca gcatcagcca gtttgagctg catctgcggg
     6061 cgattaccga tctgccgtta ccgcaaccag tagtgaataa tccgtcggtg atgatcaatc
     6121 tgattggtag cgatgcgaat tatgactggc tgaaattgcc gctggtgcat ctgcactggt
     6181 acgacaaaga agtccgtccg gggcgtaaag tggggcatct gaatttgacc gacagcgaca
     6241 catcgcgtct gactgcgacg ctggaagcct taatcccgct gctgccgcca gagtatgcca
     6301 gcggcgtgat ttgggcgcag agtaagttca gttaagcagg tgctcatttg attgccggat
     6361 gcggcgtaaa cgccttatcc ggcttaccgc tccggtaccc attgtaggcc tgataagacg
     6421 cgtcaagcgt cgaatcaggc atggtgcacc gattgccgga tgctctcatc actacagcga
     6481 aatacaggtc cccgcttcgc ccgccagcgt ctcttcaatt cgcgataacg ccccaatcca
     6541 cgcgggttta ctacggcttc tgacataacc actcaccgcc gttaccttcg gccccatcga
     6601 accatcggct ttggcaaatg gcgctaactc atccggtgtg gcatggcgaa tggcacgttg
     6661 ctgcggcgtt ccccagtttt catataccgc atcagcatcg gtgaggatca ccagtccatc
     6721 ggcattaatc tgctcggcga gcaacgcagt ggcgagatct ttatcaatca ccgcttcact
     6781 ccctgcccca tcttccgtca caggcacacc gccgccgcca ctgcaaatca ccacatgccc
     6841 ctctttgagc aacaactcga tggcttcgct gtcgagaatt ttacgcggtt gcggagacgc
     6901 caccacccgg cgcaaatatt taccatcacg tttcatctgc cagccgtaag ccgcttccag
     6961 tgcctcttgt tcttctggct gataaaccgg accaataaat ttctctggct gcaaaaacgc
     7021 cggatcatca ggcgaaacct caatgcgcgt cagcaccgtc gtaacaggcg gtatctgcgg
     7081 ctgtgcgctc aagctctgcg ccagcatata gcctcatccc ctggctttcc gccaccagca
     7141 catccagcgg atacggttct acctctttcc acgccagatt ctgtaacgcc agcagcccca
     7201 cctgcggccc gttgccgtga acaatcgcca gccgataaga acgggccagg cgtgccagcg
     7261 cgggtacagc actggcgata ttgcgatatt gattttccgc cgtcagcgcc tcaccgcgct
     7321 ggagtaaggc gttgccccca agagctacaa ccagtgtttt catggttttc cttgtaataa
     7381 ttgttggcca agccagaacc ccagcagcgt atctgcccct gacgtatgcc ccagcgccag
     7441 cagcgaatca atcgcaacag cggtacgttt cgggcaactc agagcatgga caaagtgcag
     7501 gagtggcgag gcgaaatatc cttgcgcggc ataacgtaaa taactgacgc tcaccgctgt
     7561 ggtaacgagt tgaagattgt cggaacaggc aaaaaacggg cgaccggcgc gcgcatctaa
     7621 agcgccataa taccaagccg ccagcagcat tccgctcaac gtgtcatcat gacttggcgt
     7681 taatccgggg cctttaccca gccagtgccg ccagtcggtc ttaacgccat tgagcgcggc
     7741 ctgaaaacag tgacgaaact ggcgtaattc agtggtcagc ggatcgcttg ccgccatcgc
     7801 cagtggtccg aaaagtccgg tttcctccgc gcgttgcatc catgcagctg caagcggttg
     7861 aggatgcgaa ggcggcgtaa tacgcagcaa acaataacgc tgtggctgtt taaccgtgaa
     7921 acgcccgagg cgaatccctt gagccacaac ctgtggtcgt tcattgccgc ataatccacc
     7981 gcataacgca tcgaattgcg cgcggcgaag cacccatcct ccggggccga aaccactacc
     8041 ctgacgatgc agcgttaaca gttcgccgct ttccgtcatc aggttaatcg cccgccgcca
     8101 cactcccgct aaccgccagg actggcgata attcggtgcg ctactgctgg caagcagagg
     8161 atggatgatc gtcattgcgc gttcctcaac caatccccat gctttcagcc agtgcttcca
     8221 gcgcctgttc aaagcacgcc agcggtgccc gcacggtgcc tgcgccaatc tgcccgatcc
     8281 ccgcctcttt atgggcgata ccggtattga tgagtggcgt aatgccggtt tctaccacgc
     8341 gacgaatatc cagccccagg cacgcgccct gaaaatccca gcctgggatc tgcaactgca
     8401 tattgcgttc aaggtaaatt tccgccatct cttcagatac cgccctggcc gcttccatgc
     8461 cacccgcacc gacaaagcgc gttacgccag gcgctgcgat cattgccgca cctccgatac
     8521 caaaggtttc ggtaatcgcg ctatcgccca tatccgggtt cgcctgctcc tgcgagaagc
     8581 cggtgaaaaa cagaccttgc ggagtgttta caggcgcagt aaaccagcgt tcacccagcc
     8641 cgcttacccg aatcccgaac atattgccgt tgcgggtcat agccgtaacg atgctgcctg
     8701 cgcggatcat cgcgccagca tccatcgccg ccttgcagta ggccatcgcg aggttgagga
     8761 agaactgatc ggtcacgctg aggaaatcga tcacttccgc aatgtgctgt ttatcatgat
     8821 cgaggcgagc aatttgtggg gccagcgtac gcattaacag tgctgaggaa gcaatattgc
     8881 gttgatggaa ctcatcgccc atcgtaatgc cctgcgccat catcgccgtg agatcgatac
     8941 cgcgctccat gcgccccagc gccgcgctta atactggcat taacacatcg cgcatccagc
     9001 gatggcgagt caggacatct tcgccgtaag cgccaaaacg catcactttg ccgatacctt
     9061 cgttgaggtt gcagtacgcc cggttgccgt cggtcacgtt ctcgaccacc agcatcggca
     9121 tactggcaga agtaatgccg cccattggcc cgacggcatt cacatggtga caaggaatga
     9181 agttcacttc cccctgctcc agcatcgcca gtgcctgcgc ttcatctttc gcccagcctt
     9241 cgaacagaca tccgcccacg cacgcccctt tcatgggtcc ggtcatctcc tgccagcgca
     9301 ttggcggccc ggcgtgaagc agtgttttgc cctcgtttag ttcgctgata agtgaaaaag
     9361 ccggttgcac atccagccag tgtggacgag cacgacgaat ttgttcgata accgcagcat
     9421 tggcttgcgc cactgatgta aacatgggaa ccccttattg caaacgttct aataaacgag
     9481 ccagtttttt attgccgccg gcgactggcg accattggta atgcacaacc ggtttgctgg
     9541 cgctttgtag ctccagcgca aagctgcgta atccgatgtt aatcacggcg acgttttcca
     9601 gtaatgacgg tgtatgttgc tgtgtggcag gcgagagcgg ataaattaac gctgccgcca
     9661 gcaaggtggc ttccggcagc gaactcacta ccgcgatccc cgcatcttcc agcgtggcga
     9721 tttgctgcga gcggcattgc gggtcacgtt cagtgcctgt caccgtggca atggcataca
     9781 gtggttgatt atctgaacgc gcggcacagg ctttttgcta ggcgcttacc agcgaggcgg
     9841 caggatcggc agtcgcaccg aagccaatca cgacatcaag tagcaatacg cgcacttgtg
     9901 gtttagcgcc gagatcggca attaactggt tgcgtaaggc tgggtcgatc atcggatggg
     9961 gacgcccgac ggtgtagaaa tcatcgccga ggtcaataat ctggtgacca tcggcgtcga
    10021 gcatcatgcc gtgatgatgg gtatcgtcgg cttccacgcc aaggtgtcca gcaagtaatc
    10081 ccgccgcttc ggcagccagc gtaccgccgg tatacaaacc gcaaataaat ccgctgctga
    10141 caggcgctat tgcgttacat cgcgccgtga cgcgtgaaag caggcaagcc aggcgtgcgg
    10201 cctcatccag cgaggaggca aaccagacat tctcgtcgcg ggccaccgcc ggggtataac
    10261 ctaaaaacag cgccaccatc ggtttgccgg ttgctttcat ggcattaaca attttcagac
    10321 gcacagcttc
//
LOCUS       DADKRT010000155        10290 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.157, whole genome shotgun sequence.
ACCESSION   DADKRT010000155 DADKRT010000000
VERSION     DADKRT010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10290
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.157"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            107..748
                     /locus_tag="JQ356_003293"
     CDS             107..748
                     /locus_tag="JQ356_003293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HAY4623289.1"
                     /translation="MRGTNKVTGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALA
                     FACINRQMIALRIMQQVKATGSPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVI
                     IPGSRGDYSWIVQPVANEKTLHSLAHGAGRKWGRTECKWRLAAKYTVTQLSRTELGSR
                     IICRDKQLIFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG"
     gene            745..1359
                     /locus_tag="JQ356_003294"
     CDS             745..1359
                     /locus_tag="JQ356_003294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY4623290.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1416..2873)
                     /gene="pepD"
                     /locus_tag="JQ356_003295"
     CDS             complement(1416..2873)
                     /gene="pepD"
                     /locus_tag="JQ356_003295"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY4623291.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3134..3592
                     /gene="gpt"
                     /locus_tag="JQ356_003296"
     CDS             3134..3592
                     /gene="gpt"
                     /locus_tag="JQ356_003296"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY4623292.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3684..4928
                     /gene="frsA"
                     /locus_tag="JQ356_003297"
     CDS             3684..4928
                     /gene="frsA"
                     /locus_tag="JQ356_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HAY4623293.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4986..5387
                     /locus_tag="JQ356_003298"
     CDS             4986..5387
                     /locus_tag="JQ356_003298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HAY4623294.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5426..6481)
                     /gene="phoE"
                     /locus_tag="JQ356_003299"
     CDS             complement(5426..6481)
                     /gene="phoE"
                     /locus_tag="JQ356_003299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HAY4623295.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6769..7872
                     /gene="proB"
                     /locus_tag="JQ356_003300"
     CDS             6769..7872
                     /gene="proB"
                     /locus_tag="JQ356_003300"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HAY4623296.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7884..9137
                     /gene="proA"
                     /locus_tag="JQ356_003301"
     CDS             7884..9137
                     /gene="proA"
                     /locus_tag="JQ356_003301"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HAY4623297.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9252..9327
                     /locus_tag="JQ356_003302"
     tRNA            9252..9327
                     /locus_tag="JQ356_003302"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9285..9287,aa:Thr,seq:cgt)
     gene            complement(9342..>10290)
                     /locus_tag="JQ356_003303"
     CDS             complement(9342..>10290)
                     /locus_tag="JQ356_003303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY4623298.1"
                     /translation="KKSLDDDKSRIGFWLQHFAGMQLRDITESKIYSAMQKMTNRRHE
                     ENWKLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAAEREWKMLDKAPIIK
                     VPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSNIINLEWQQIDMQRR
                     VAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESCTKPDGTKAPTVRK
                     MRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQEMGGWESIEMVRR
                     YAHLAPNHLTEHARQIDSILNPSVPNLSQSRNKERTNDV"
BASE COUNT         2465 a         2540 c         2683 g         2602 t
ORIGIN      
        1 ctattagcgg ttaccagcgc cccaccagac ccggtgacat caccccccgg atcatggacg
       61 actgggggca gtaatcatgc cgggtctggc tggctaacac cccattataa ggggtacgaa
      121 taaagtaacg gggcagtcta ttttacagcg gcatattgcc tcgttctcgc atcatggttt
      181 gcctcaaggc agtgacgacg cgctacggta tattgcggaa catgacgatg cgctggcgtt
      241 tgcgtgtatt aatcgccaga tgatcgcttt gcgcataatg caacaagtta aggccacggg
      301 aagtccggtt ctggatgtgg cgcataactt tgttagcgcg tgtcaaatcg gcgatcaaca
      361 gggctggttg catcgtaaag gtgccacgcc ggatgacaac ggtctggtga ttattcccgg
      421 ttcacgtggt gattactcct ggattgtaca gcctgttgcg aacgaaaaaa cgctccactc
      481 gctggcgcat ggggcagggc gtaaatgggg gcgcaccgag tgtaaatggc gtctggcagc
      541 gaaatacacg gtgacgcaac tctcgcggac tgaacttggc agtcggataa tttgtcgcga
      601 taaacaactc atctttgaag aagcgccaca agcctataaa tcggctgaaa gcgtggtgca
      661 atgtctggtg caggccggtt taattattcc tgtcgcgcgg ctgcgtccgg tgctaacgct
      721 caaaaacagt ggagggaaaa aaggatgatc ttgctacaac tctcctcagc gcaggggccg
      781 gaagaatgtt gtctcgcagt gaaaaaggcg ctggacaggc taattaaaga agctgcccga
      841 caagacgtcg cggtaacggt gttggaaaca gaaacgggcc gctactctga cacgctgcgt
      901 tcagctctgg tttctctgga tggcgataac gcatgggcat taagcgaaag ctggtgtggc
      961 actattcagt ggatttgtcc gagtccgtat cggcctcatc atgggcgcaa aaactggttt
     1021 ctgggcattg ggcgttttac cgctgatgag caggagcaat ccgatgcgat ccggtatgag
     1081 acgctgcgtt cgtcggggcc gggcggtcaa catgtcaata aaaccgactc ggcggtacgc
     1141 gccacgcatt tggcatccgg tattagcgtg aaggttcagt cagagcgtag tcagcatgct
     1201 aacaagcggc tggcacgatt gctgattgcc tggaagctgg agcagcagca acaggaaaat
     1261 agcgcggtgc tgaaatcgca gcggcgaatg ttccatcacc agattgaacg tggcaacccg
     1321 agacggacat ttacagggat ggcttttatc gaaggataat gaaggatgaa actgccggaa
     1381 ggcgattaaa cgccatccgg cagcaaatca aataattact tcgccggaat ttctttcagc
     1441 agttcagtca gcagtgtcca gtaatgacct acgctttcga tgtgaacttg ctcatccgga
     1501 gagtgtggac cggtgatagt tggcccgata gaaaccatgt ccatttccgg atacggtttt
     1561 ttgaacagac cacattccag gcccgcgtgg ataatctgga tgttcggcgt cttgttgaac
     1621 aggcgctgat aggtttcacg taccagatgc atcaccggag aattagcgtc cggctgccag
     1681 ccaggatatg cgcctttcgc ttcggttttc gcgccagcca gtttacccag cgaatccagc
     1741 atgctcacca cgtagtcttt accgctgtcg atcagtgaac ggatcaggca gtgaatttct
     1801 acgttattgt cagtcatggt caccacaccg acgttcaggg aggtttcaac cacacctttg
     1861 gctacatcgg agttgcggat cacaccgttc ggggtggcgt tcagcagacg aataaaggta
     1921 tcgcgagatt tcgcaatcag ggcagcttta tcgttcgcta cagagtccag caacaaggcc
     1981 agatttttct ctttctctgc cagctcgttt ttcaggatct cctgataggt attcaccaga
     2041 gatttcagtg cgtcgacttt atcagctgcg acagcaatgg tcgcaaaggc ttcacgcggg
     2101 atggcgttac gcagtgtgcc gccgttgaaa tcgataaggc gcaggtccag ttcttctgca
     2161 tgacccgcca ggaagcgcac cagcagtttg ttggcattac ccaggccaac gtggatttca
     2221 ccgccggagt gaccgccttt cagacctttt aaggttaact tgaaggtttc aaaaccagct
     2281 ggaaccgctt cacgatctaa atgcaggttg gaggtgaagt cgataccccc cgcacaaccc
     2341 atgtagattt caccttcttc ttcggagtcg gtgttaatca gaatatcagc ctgcaaccag
     2401 ttgctctgta agccaaaagc accgtccata ccggcttctt cggtcatggt cagcagcact
     2461 tccagcggac cgtgaaccac gttttcgtca gccagaaccg ccagtgcaga ggccatacca
     2521 atgccgttat ccgcacccag cgtggtgccg cgcgctttaa cccattcgcc atcaatataa
     2581 ggctggatag gatctttcgt gaagtcatgc acggtgtcgt tatttttctg cggcaccata
     2641 tcgaggtggg cctgtaagac gaccggttta cgattttcca tacctgcggt agcaggttta
     2701 cgaatcagga tattacctac ctgatcgcgt tcgacatgga aacctttctc ttttgcccaa
     2761 ccaacaatgt attcagcgag ttgctcttca tgataggacg ggtgcggaat agaacagatt
     2821 ttggcaaaaa tatcccacag cggctgtgga gataattgag acagttcaga cacgttaagt
     2881 ctccttgtcg atcacccgca aaacagtatt gcaggtcaca gggttagcag aaaatgttgt
     2941 caacacaaga caggcttgcg agatatgttt gagaatacca ctttatcccg cgtcagggag
     3001 aggcagtgcg taaaaagacg cggactcatg tgaaatactg gtttttagtg cgccagatct
     3061 ctataatctc gcgcaaccta ttttcccctc gaacactttt taagccgtag ataaacaggc
     3121 tgggacactt cacatgagcg aaaaatacat cgtcacctgg gacatgttgc agatccatgc
     3181 acgtaaactc gcaagccgac tgatgccttc tgaacaatgg aaaggcatta ttgccgtaag
     3241 ccgtggcggt ctggtaccgg gtgcgttact ggcgcgtgaa ctgggtattc gtcatgtcga
     3301 taccgtttgt atttccagct acgatcacga caaccagcga gagcttaaag tgctgaaacg
     3361 cgcagaaggc gatggcgaag gcttcatagt tattgatgac ctggtggata ccggtggtac
     3421 tgctgttgcg attcgtgaaa tgtatccaaa agcgcacttt gtcaccatct tcgcaaaacc
     3481 ggctggtcgt ccgctggttg atgactatgt tgttgatatt ccgcaagata cctggatcga
     3541 acagccgtgg gatatgggcg tcgtattcgt cccgccaatc tccggtcgct aatcttttca
     3601 acgcctggca ctgccgggcg ttgttctttt taacttcagg caggttacaa tagtttccag
     3661 taagtattct ggaggctgca tccatgacac aggcaaacct gagcgaaacc ctgttcaaac
     3721 cccgctttaa acatcctgaa acctcgacgc tagtccgccg ctttaatcac ggcgcacaac
     3781 cgcctgtgca gtcggctctt gatggtaaaa ccatccctca ctggtatcgc atgattaacc
     3841 gtctgatgtg gatctggcgc ggtattgacc cacgtgaaat cctcgacgtc caggcacgta
     3901 ttgtgatgag cgatgctgaa cgtaccgacg atgatttata cgatactgtg attggctacc
     3961 gtggtggcaa ctggatttat gagtgggcca cccaggcgat ggtgtggcaa caaaaagcct
     4021 gtgcggaaga agatccgcaa ctcagtggtc gacactggct gcatgcggct acgttgtaca
     4081 acattgccgc ctatcctcat ctgaaaggag atgacctggc cgagcaagcg caggctttat
     4141 caaaccgcgc ctatgaagag gccgcccagc gtctgccggg cacgatgcgg cagatggagt
     4201 ttaccgtacc cggcggtgcg cccatcaccg gctttttgca tatgccgaaa ggcgatggcc
     4261 cgttcccgac agtattaatg tgtggtggtc tggatgcgat gcagacggac tattacagcc
     4321 tgtatgaacg ttattttgcg ccgcgcggca ttgtgatgct gactattgat atgccgtcgg
     4381 tgggcttttc ttcaaaatgg aagctcaccc aggactccag cctgttgcat cagcacgtct
     4441 taaaggcgct gcctaacgta ccgtgggtgg atcacactcg cgtcgcggcc tttggtttcc
     4501 gtttcggcgc taacgttgcc gtgcgtctgg catatcttga atcgccgcgt ctgaaagcgg
     4561 ttgcctgtct tggtccggta gttcataccc tgttgagtga ttttaagtgc cagcaacagg
     4621 tgccggaaat gtatcttgac gttctggcga gtcgtttggg gatgcatgat gcttccgacg
     4681 aagcgttacg cgtggagctg aatcgctatt cattaaaagt gcaaggattg ctgggacgtc
     4741 gctgcccaac gccaatgtta tcaggctact ggaagaacga tccgttcagc ccggaagagg
     4801 actcacgctt aatcacctca tcatctgctg acggtaaatt attagagatc ccatttaacc
     4861 cggtgtatcg gaattttgac aaaggtcttc aggaaatcac cggctggatc gaaaaacgct
     4921 tgtgttaaaa atttgctaaa ttttgccaat ttggtaaaac agttgcatca caacaggaga
     4981 tagcaatgac gttaccgagt ggacacccga agagcagatt gatcaaaaaa tttaccgcac
     5041 taggcccgta tattcgtgaa ggtaagtgcg aagataatcg attctttttc gattgtctgg
     5101 ctgtatgcgt caacgtgaaa ccggcaccgg aagtgcgtga attctggggc tggtggatgg
     5161 agctggaagc gcaggaatcc cgttttacct acagctacca gtttggtctg ttcgataaag
     5221 caggcgactg gaagagtgtt ccggtaaaag atactgaagt ggttgaacga ctggagcaca
     5281 ccctgcgtga gtttcacgag aagctgcgtg aactgctgac gacgctgaat ctgaagctgg
     5341 aaccggcgga tgattttcgt gacgagccgg tgaagttaac ggcgtgagtg aaatgtgccg
     5401 gatgcatcac atccggcaat atctattaaa actgatacgt catcccaatc gcgacaatat
     5461 catcattatt aatattcaat ttgttatcgc tatccagttg gttgatttta taatcaacaa
     5521 atgctgacat atttttgttg aaataatacg tagcaccgac gtcgatataa ttaaccagat
     5581 cttcaccacc gatgccctca atatctttcc ctttcgataa gacataaccc agcgatggac
     5641 gcagaccaaa gtcaaactgg tattgagcga ccgcttcaaa gttctgtgtc ttattggcaa
     5701 agccgccagt tattggcgtc attttgcgag tttcagaata gaaagttgcc agataaatat
     5761 tattggcatc gtatttcaga cctgttgccc atgcttctgc acgcttgcct gtgccacggc
     5821 tttgcaggtt ctgctcgttg gtgcgatctg agttggtata ggccccacta atggcgaaat
     5881 cgctgccgcc aaagtcatat gtcaatgacg tgccgaagcc atcgccgttt tgctttttaa
     5941 cgtcgcggtt ttcgtttttc ccttgatatt gcagggttaa gttcaggcca tcgataacgc
     6001 cgaagaagtc ggtgttccga tacgtcgcca gaccgctggc gcgtttggtc ataaagttgt
     6061 cggtctgcgc cgaggagtcg ccaccaaatt ccggaaacat atcggtccag gcttccacgt
     6121 catacaacgc gcccaggtta cgaccataat cgaaagaacc caaatcttta tatttcaacc
     6181 cggcaaaagc gagacgcgtt ttttgctgtg cagtatcact ctctgcttta ttaccggcaa
     6241 actctgcttc ccaacgacca taaccagtca gttgatcgtt aatttgtgtt tcgcctttaa
     6301 aaccaaaacg gatataactc tggtcgccat ctttactgtc gttatcactc atataatgca
     6361 tggctttaac tttgccatag acatccagtt tattaccgtc tttgttatat atttctgcgg
     6421 cctgtacgga tgcagatgcc acaatgccca tcaccactaa tgccagagtg ctctttttca
     6481 ttttcattcc tgattttaat taacgcgcga atattcagcg ggagagcccc gttgaaaaca
     6541 ggaaagtttt taacctgaga ttgttaaaga tatattacag attaataata ttcttaaaat
     6601 gtggtaattt attaaatctg taataaaagc gtaaacaact gccgctaggc ttgctgatcc
     6661 cgcgcaacaa aacgccatgc tttgctcgca gatggttggc aaccgacgac agtcctgcta
     6721 aaacgttcgt ttgatatcat ttttcctaaa attgaatggc agagaatcat gagtgacagc
     6781 cagacgctgg tggtaaaact cggcaccagt gtgctaacag gcggatcgcg ccgtctgaac
     6841 cgtgcccata tcgttgaact tgttcgccag tgcgcgcagt tacatgccgc cgggcatcgg
     6901 attgttattg tgacgtcggg cgcgatcgcc gccggacgtg agcacttggg ttacccggaa
     6961 ctgccagcga ctatcgcctc gaaacaactg ctggcagcgg tagggcagag tcgactgatt
     7021 caactgtggg aacagctgtt ttcgatttat ggcattcacg tcgggcaaat gctgctgacc
     7081 cgtgctgata tggaagaccg tgaacgcttc ctgaacgccc gcgacaccct gcgtgcgttg
     7141 ctcgataaca atatcgttcc ggtaatcaat gagaacgatg ctgtcgctac ggcagagatt
     7201 aaagtcggcg ataacgataa cctttctgcg ctggcggcga ttctggcggg tgccgataaa
     7261 ctgttgctgc tgaccgatca aaaaggtttg tataccgctg acccgcgcag caatccgcag
     7321 gcagaactga ttaaagatgt ttacggcatt gatgacgcac tgcgcgcgat tgccggtgac
     7381 agcgtttcag gcctcggaac tggcggcatg agtaccaaat tgcaggccgc tgacgtggct
     7441 tgccgtgcgg gtatcgacac cattattgcc gcgggcagca agccgggcgt tattggtgat
     7501 gtgatggaag gcatttccgt cggtacgctg ttccatgccc aggcgactcc gcttgaaaac
     7561 cgtaaacgct ggattttcgg tgcgccgccg gcgggtgaaa tcacggtaga tgaaggggca
     7621 actgccgcca ttctggaacg cggcagctcc ctgttgccga aaggcattaa aagcgtgact
     7681 ggcaatttct cgcgtggtga agtcatccgc atttgcaacc tcgaaggtcg cgatatcgcc
     7741 cacggtgtca gtcgttacaa cagcgatgca ttacgccgta ttgccggaca ccactcgcaa
     7801 gaaattgatg caatactggg atatgaatac ggcccggttg ccgttcaccg tgatgacatg
     7861 attacccgtt aaggagctgg ccgatgctgg aacaaatggg cattgccgcg aagcaagcct
     7921 cgtataaatt agcgcaactc tccagccgcg aaaaaaatcg cgtgctggaa aaaatcgccg
     7981 atgaactgga agcacaaagc gaaatcattc tcaacgctaa cgcccaggat gttgctgacg
     8041 cgcgagccaa tggccttagc gaagcgatgc ttgaccgtct ggcactgacg cccgcacggc
     8101 tgaaaggcat tgccgacgat gtacgtcagg tgtgcaacct cgccgatccg gtggggcagg
     8161 taatcgatgg cggcgtactg gacagcggcc tgcgtcttga gcgtcgtcgc gtaccgctgg
     8221 gagttattgg cgtgatttat gaagcgcgcc cgaacgtgac ggttgatgtc gcttcgctgt
     8281 gcctgaaaac cggtaatgcg gtgatcctgc gcggtggcaa agaaacgtgt cgcactaacg
     8341 ctgcaacagt ggcggtgatt caggacgccc tgaaatcctg cggcttaccg gcgggtgccg
     8401 tgcaggcgat tgataatcct gaccgtgcgc tggtcagtga aatgctgcgt atggataaat
     8461 acatcgacat gctgatcccg cgtggtggcg ctggtttgca taaactgtgc cgtgaacagt
     8521 cgacaatccc ggtgatcaca ggtggtatag gcgtatgcca tatttacgtt gatgaaagtg
     8581 tagagatcgc tgaagcatta aaagtgatcg tcaacgcgaa aactcagcgt ccgagcacat
     8641 gtaatacggt tgaaacgttg ctggtgaata aaaacatcgc cgatagcttc ctgcccgcat
     8701 taagcaaaca aatggcggaa agcggcgtga cattacacgc agatgcagct gcactggcgc
     8761 agttgcaggc aggccctgcg aaggtggttg ctgttaaagc cgaagagtat gacgatgagt
     8821 ttctgtcatt agatttgaac gtcaaaatcg tcagcgatct tgacgatgcc atcgcccata
     8881 ttcgtgaaca cggcacacaa cactccgatg cgatcctgac ctgcgatatg cgcaacgccc
     8941 agcgttttgt taacgaagtg gattcgtccg ctgtttacgt taacgcctct acgcgtttta
     9001 ccgacggcgg ccagtttggt ctgggtgcgg aagtggcggt aagcacacaa aaactccacg
     9061 cgcgtggccc aatggggctg gaagcactga ccacttacaa gtggatcggc attggtgatt
     9121 acaccattcg tgcgtaaata aaaccgggtg atgcaaaagt agccatttga ttcacaaggc
     9181 cattgacgca tcgcccggtt agttttaacc ttgtccaccg tgattcacgt tcgtgaacat
     9241 gtcctttcag ggccgatata gctcagttgg tagagcagcg cattcgtaat gcgaaggtcg
     9301 taggttcgac tcctattatc ggcaccattt aaatcaataa gttacacatc attagtacgt
     9361 tccttatttc ttgactggga caaatttggg accgatgggt tcagaatcga gtctatttgc
     9421 cgtgcgtgtt cggtaaggtg attaggtgcg aggtgagcat atcgacgaac catttcgata
     9481 gactcccagc ctcccatttc ctgtaacact gataacggga ctccggcttg aaccagccaa
     9541 cttgcccagg tgtgtctcaa gtcgtgaaat ctgaaatcat caatacctgc tcgtctcagc
     9601 gccgctttcc aggctgtgtt tgcgtcatac cgcatcttcc tgactgttgg cgctttcgtt
     9661 ccgtctggtt tggtacagct ttccttatac acaaataccc aacggtgatg attcccgatt
     9721 tgttttttca atacgcgaca tgcagtatca ttcagcgcaa cgccaattgc gcggtttgat
     9781 ttactctctt ccgggtttat ccatgccacc cggcgctgca tgtctatttg ttgccattca
     9841 aggttgatga tgttcgagcg tcttaagcct gttgcaagtg caaattcaac aacagacttt
     9901 aatggctccg gacattcatc aatcagcctt tgtgcttcat gaggctccag ccagcggatc
     9961 cgtttattct ttggttgagg cactttaata attggtgcct tatccagcat tttccattca
    10021 cgctctgcgg ctcttagcag ggcctttata aatgaaagat gcgtagcctt cgttgcaacg
    10081 gacgctggtt ttggcgtgta ttctggaaca ggtttccctt tttttctgca tgcttctgcc
    10141 ctgagtttcc agttttcctc atgacgccgg ttcgtcattt tctgcattgc tgaataaatt
    10201 tttgattcag taatgtctct tagttgcatt cctgcgaaat gttgaagcca gaatccgatc
    10261 cggcttttgt catcgtccag tgatttttta
//
LOCUS       DADKRT010000156        10213 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.159, whole genome shotgun sequence.
ACCESSION   DADKRT010000156 DADKRT010000000
VERSION     DADKRT010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10213
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.159"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            141..1997
                     /gene="kup"
                     /locus_tag="JQ356_003304"
     CDS             141..1997
                     /gene="kup"
                     /locus_tag="JQ356_003304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity potassium transporter Kup"
                     /protein_id="HAY4623299.1"
                     /translation="MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV
                     ERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSML
                     VIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKH
                     GTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIAL
                     GAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNP
                     FFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMES
                     GQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHW
                     NKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRR
                     MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILL
                     TLRTEDAPYVHNVRRVQIEQLSLTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMME
                     TSFFMSHESKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI"
     gene            2164..2583
                     /gene="rbsD"
                     /locus_tag="JQ356_003305"
     CDS             2164..2583
                     /gene="rbsD"
                     /locus_tag="JQ356_003305"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709562.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HAY4623300.1"
                     /translation="MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMAL
                     TQGVPSFMQVLGVVTNEMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIR
                     YTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF"
     gene            2591..4060
                     /gene="rbsA"
                     /locus_tag="JQ356_003306"
                     /pseudo
     CDS             2591..4060
                     /gene="rbsA"
                     /locus_tag="JQ356_003306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418205.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
     gene            4065..5030
                     /gene="rbsC"
                     /locus_tag="JQ356_003307"
     CDS             4065..5030
                     /gene="rbsC"
                     /locus_tag="JQ356_003307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HAY4623301.1"
                     /translation="MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTIN
                     NLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVA
                     AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADL
                     FGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNK
                     IKIIVYSLCGLLASLAGTIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIV
                     GTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ"
     gene            5055..5941
                     /gene="rbsB"
                     /locus_tag="JQ356_003308"
                     /pseudo
     CDS             5055..5941
                     /gene="rbsB"
                     /locus_tag="JQ356_003308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312720.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
     gene            6067..6996
                     /gene="rbsK"
                     /locus_tag="JQ356_003309"
     CDS             6067..6996
                     /gene="rbsK"
                     /locus_tag="JQ356_003309"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HAY4623302.1"
                     /translation="MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNK
                     TIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR
                     TVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR"
     gene            7000..7992
                     /gene="rbsR"
                     /locus_tag="JQ356_003310"
     CDS             7000..7992
                     /gene="rbsR"
                     /locus_tag="JQ356_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HAY4623303.1"
                     /translation="MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELN
                     YAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDN
                     SLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTG
                     DFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDI
                     ELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA"
     gene            complement(7958..9385)
                     /locus_tag="JQ356_003311"
     CDS             complement(7958..9385)
                     /locus_tag="JQ356_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HAY4623304.1"
                     /translation="MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
                     PLAMQSAIISYTLTVAMFIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQL
                     VVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVT
                     RATWHWIFLINIPIGIAGLLYARKHMPNFTTAQRRFDITGFLLFGLSLVLFSSGIELF
                     GEKIVASWIALTVIVTSIGLLLLYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRL
                     GTGSVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGI
                     TVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGN
                     SVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLL
                     KTTDGNNLIKRQRKSKPNRVPSESE"
     gene            complement(9408..10100)
                     /locus_tag="JQ356_003312"
     CDS             complement(9408..10100)
                     /locus_tag="JQ356_003312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HAY4623305.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELG
                     EQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQ
                     VIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKKNFRRERWIEVDMAW
                     HEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAF
                     KTCQALLRSPDK"
BASE COUNT         2486 a         2458 c         2702 g         2567 t
ORIGIN      
        1 aaggggggta tttttctttg agccaggtta atgtggccgc atttaggagt acgattttgc
       61 cgttaatcgt gcatactgtg cgcttttttg tgggccaagg gactaagcac acatttcata
      121 tttcaacgaa agactagtct atgagcactg ataataagca atcattgccc gcgattaccc
      181 tcgcggcgat tggagttgtc tacggcgata ttggtaccag cccgttatat acacttcgtg
      241 aatgtttgtc cggccagttt ggttttggcg ttgaacgcga tgccgtgttt ggctttttat
      301 cgctgatctt ctggctgcta atctttgtgg tttccattaa atatctcacc ttcgtgatgc
      361 gggcagataa cgccggtgag ggggggatcc tgacgttgat gtcgcttgcc gggcgtaata
      421 cgtcggcgcg aaccacatca atgctggtga ttatggggct aatcggcggc agctttttct
      481 atggtgaagt cgtcataaca cccgctattt cggtgatgtc agccattgaa ggtctggaaa
      541 tcgtcgcccc gcagctggat acctggatag ttcccctctc aattatcgtt ctcactttat
      601 tatttatgat tcaaaaacat ggcacggcta tggtcggtaa gctgtttgcg ccgatcatgc
      661 tgacctggtt tttgattctg gcaggactgg ggttacgtag cattattgct aacccggaag
      721 tgctgcatgc gctgaatcca atgtgggcgg tgcatttctt ccttgaatac aaaacggttt
      781 cttttattgc attaggggca gtggtgttgt cgattacggg ggtcgaggcg ctgtatgctg
      841 atatggggca ctttggtaag ttccctattc gcctggcgtg gttcaccgtc gtattacctt
      901 ccttgaccct taattacttc ggtcagggag cgctgttgtt aaagaacccg gaagcgatta
      961 agaacccgtt cttcctgttg gcaccggact gggcgctgat cccgctgctg atcatcgccg
     1021 cactggcgac ggtaattgcc tcgcaggcgg ttatctctgg cgtcttctca ttgacgcgtc
     1081 aggcggtacg tctgggatat ttgtcgccga tgcgcattat tcacacctcc gaaatggagt
     1141 cagggcaaat ctatattccg tttgtgaact ggatgctcta tgtcgcggtc gtgattgtga
     1201 ttgtcagctt tgagcactcc agcaacctgg cggcggcgta cgggattgcg gtgaccggaa
     1261 ccatggtgct gacgtctatt ctctcgacta ccgtggcacg tcagaactgg cactggaata
     1321 agtattttgt tgcgctgatc ctgattgctt tcctttgtgt cgatattcca ttgttcaccg
     1381 ctaacctcga taaactgctc tccggcggtt ggttgccatt gagcctcggt acggtgatgt
     1441 ttatcgtgat gaccacctgg aagagcgagc gtttccgctt gctgcggcgg atgcatgaac
     1501 atggtaactc tctggaagcg atgattgctt cgctggagaa atcaccgcct gttcgcgtgc
     1561 ccgggaccgc ggtgtatatg tcgcgtgcaa tcaacgtcat tccctttgcg ctgatgcata
     1621 accttaaaca taacaaggta ttgcatgagc gggtgattct gttaactctg cgtaccgaag
     1681 acgcgccata tgtccataat gtccgtcggg tacagattga acaactgtcg ctcactttct
     1741 ggcgcgtggt ggcaagttat ggttggcgag aaacgccaaa cgtggaagaa gttttccacc
     1801 gctgcggtct ggaaggatta agttgccgga tgatggaaac ctccttcttt atgtcgcatg
     1861 agtcgaaacg cccgtggtat ttgcgtctgc gcggcaagct gtacttgctg ctgcaacgta
     1921 atgcgctgcg tgcaccagat caatttgaaa tcccgccaaa cagggttatc gaactgggta
     1981 ctcaggtcga aatctaacgc cagacgcctc ctttctccat aagggggcgt ttttgttttc
     2041 atggttaatc accatgtaaa acgtttcgag gttgatcaca tttccgtaac gtcacgatgg
     2101 ttttcccaac tcagtcagga ttaaactgcg ggtcagcgaa acgtttcgct gatggagaaa
     2161 aaaatgaaaa aaggcaccgt tcttaattct gatatttcat cggtgatctc ccgtctggga
     2221 cataccgata cgctggtggt gtgtgatgct ggtttaccca tccccaaaag tacaacgcgt
     2281 atcgatatgg cattaaccca gggtgtacct tcttttatgc aggtgctggg cgtcgttaca
     2341 aatgaaatgc aggtcgaggc tgccattatc gcggaagaga tcaaacaaca taatccgcaa
     2401 ctccacgaaa cgttgctcac tcaccttgag cagctgcaaa aacaccaggg aaataccatt
     2461 gaaattcgtt acaccacgca tgaacaattc aaacaacaaa ccgcagaaag tcaggcggta
     2521 attcgcagcg gagaatgttc tccgtatgcg aatatcattc tctgtgctgg cgtgacgttc
     2581 tgaggccgtc atggaagcat tacttcagct taaaggcatc gataaagcct tcccgggcgt
     2641 aaaagccctc tcgggcgctg cgttaaatgt ctatccgggc cgcgtgatgg cgctggtggg
     2701 cgaaaacggc gcgggtaaat ccaccatgat gaaagtgctt actggtatct atgctcgcga
     2761 tgccggcacg cttttatggc tggggaaaga aacgacattt accgggccga aatcttccca
     2821 ggaagccggg attgggatta tccatcagga actgaacctg atcccgcagt tgaccattgc
     2881 cgaaaacatt ttcctcggtc gtgagtttgt taatcgcttt ggcaaaattg actggaaaac
     2941 catgtatgcc gaagcggata aattgctggc taaacttaac ctgcgcttta aaagcgacaa
     3001 gctggtgggc gatctttcca tcggtgacca gcaaatggtt gaaatcgcca aagtgctgag
     3061 ctttgagtcg aaagtcatca ttatggatga accgaccgat gcgctgaccg ataccgaaac
     3121 cgaatccctg ttccgcgtca tccgcgaact aaaatcgcaa ggccgcggta ttgtctatat
     3181 ctcccaccgc atgaaagaaa tcttcgagat ttgcgatgcc gttaccgttt ttcgtgacgg
     3241 gcaatttatt gctgagcgcg aagtggcatc actgaccgaa gattcgctga ttgagatgat
     3301 ggtgggtcgc aagctggaag atcaatatcc acacctggac aaagcgccgg gagatatccg
     3361 cctgaaagtc gataatctct gcggacctgg cgttaacgat gtctctttta ctttacgcaa
     3421 aggcgaaatt cttggcgtct ctggtttgat gggcgcaggt cgtaccgaac tgatgaaagt
     3481 gctctacggc gcactaccgc gcaccagcgg ttacgtcacc ctggatgggc atgaagtcgt
     3541 tacccgttca ccgcaggatg gcctggcaaa cggcattgtg tatatctccg aagaccgtaa
     3601 acgtgacggt ttagtgttgg gcatgtcagt aaaagagaac atgtcgctga cagcgctgcg
     3661 ctacttcagc cgcgctggcg gcagtttgaa gcatgccgat gaacagtagg ctgtgagtga
     3721 tttcattcgt ctgtttaatg tgaaaacacc gtcgatggaa caggcaattg gtctgctttc
     3781 cggtggcaat cagcaaaaag tgttgatcct tgatgaacct acccgtggcg tagatgtcgg
     3841 cgcgaaaaaa gagatctatc aactgattaa ccagttcaaa gccgatggct tgagcatcat
     3901 tctggtgtca tcggagatgc cagaagtatt aggcatgagc gatcgcatca tcgtcatgca
     3961 tgaagggcat ctcagcgggg aatttactcg tgagcaggcc acccaggaag tgttaatggc
     4021 tgccgctgtg ggcaagctta atcgcgtgaa tcaggagtaa aaaaatgaca acccagactg
     4081 tctctggtcg ccgttatttc acgaaagcgt ggctgatgga gcagaaatcg cttatcgctc
     4141 tgctggtgct gatcgcgatt gtctcgacgt taagcccgaa ctttttcacc atcaataact
     4201 tattcaatat tctccagcaa acctcggtga acgccattat ggcggtcggg atgacgctgg
     4261 tgatcctgac ttcgggcatc gacttgtctg taggttctct gttggcgcta accggcgcag
     4321 ttgctgcatc tatcgtcggc attgaagtca atgcgctggt ggctgtcgct gctgctctcg
     4381 cgttaggtgc cgcaattggt gcggtaaccg gggtgattgt agcgaaaggt cgcgttcagg
     4441 cgtttatcgc tacgctggtt atgatgcttt tactgcgcgg cgtgaccatg gtttatacca
     4501 acggtagccc agtgaatacc ggctttactg agaacgccga tctgtttggc tggtttggta
     4561 ttggtcgtcc gctgggcgta ccgacgccag tctggatcat ggggattgtc ttcctcgcgg
     4621 cctggtacat gctgcatcac acgcgtctgg ggcgttacat ctacgcgctg ggcggcaacg
     4681 aagcggcaac gcgtctttct ggtatcaacg tcaataaaat caaaatcatc gtctattctc
     4741 tttgtggtct gctggcatcg ctggccggga ccattgaagt ggcgcgtctc tcctccgcac
     4801 aacccacggc ggggactggc tatgagctgg atgctattgc tgcggtggtt ctgggcggta
     4861 cgagtctggc gggcggaaaa ggtcgcattg ttgggacgtt gatcggcgca ttaattcttg
     4921 gcttccttaa taatggattg aatttgttag gtgtttcctc ctattaccag atgatcgtca
     4981 aagcggtggt gattttgctg gcggtgctgg tagacaacaa aaagcagtaa taacgactac
     5041 aggacatctt gaatatgaac atgaaaaaac tggctaccct ggtttccgct gttgcgctaa
     5101 gcgccaccgt cagtgcgaat gcgatggcaa aagacaccat cgcgctggtg gtctccacgc
     5161 ttaacaaccc gttctttgta tcgctgaaag atggcgcgca gaaagaggcg gataagcttg
     5221 gctataacct ggtggtgctg gactcccaga acaacccggc gaaagagctg gcgaacgtgc
     5281 aggacttaac cgttcgcggc accaaaattc tgctgattaa cccgaccgac tccgacgcag
     5341 taggtaatgc tgtgaagatg gctaaccagg cgaacatccc ggttatcact cttgaccgcc
     5401 aggcaacgaa aggtgaagtg gtgagccaca ttgcttctga taacgtactg ggtggcaaaa
     5461 tcgccggtga ttacatcgcg aagaaagcgg gtgaaggtgc caaagttatc gagctgcaag
     5521 gcattgctgg tacatccgca gcccgtgaac gtggcgaagg cttccagcag gccgttgctg
     5581 ctcacaagtt taatgttctt gccagccagc agattttgat cgcactaaag gtttgaacgt
     5641 aatgcagaac ctgttgaccg ctcatccgga tgttcaggct gtattcgcgc agaatgatga
     5701 aatggcgctg ggcgcgctgc gcgcactgca aactgccggt aaatcggatg tgatggtcgt
     5761 cggatttgac ggtacaccgg atggcgaaaa agcggtgaat gatggcaaac tagcagcgac
     5821 tatcgctcag ctacccgatc agattggcgc gaaaggcgtc gaaaccgcag ataaagtgct
     5881 gaaaggcgag aaagttcagg ctaagtatcc ggttgatctg aaactggttg ttaagcagta
     5941 gttttaatca ggttgtatga cctgatggtg acataaatac gtcatcgaca gatgaacgtg
     6001 taatataaag aaaagcaggg cacgcgccac cctaacacgg tggcgcattt tatggacatc
     6061 ccgaatatgc aaaacgcagg cagcctcgtt gttcttggca gcattaatgc tgaccacatt
     6121 cttaatcttc aatcttttcc tactccaggc gaaaccgtaa ccggtaacca ctatcaggtt
     6181 gcatttggcg gcaaaggcgc gaatcaggct gtggctgctg ggcgtagcgg tgcgaatatc
     6241 gcgtttattg cctgtacggg tgatgacagc attggtgaga gcgttcgcca gcagctcgcc
     6301 actgataaca ttgatattac tccggtcagc gtgatcaaag gcgaatcaac aggtgtggcg
     6361 ctgatttttg ttaatggcga aggtgagaat gtcatcggta ttcatgccgg cgctaatgct
     6421 gccctttccc cggcgctggt ggaagcgcaa cgtgagcgta ttgccaacgc gtcagcatta
     6481 ttaatgcagc tggaatcacc actcgaaagt gtgatggcag cggcgaaaat cgcccatcaa
     6541 aataagacta tcgttgcgct taacccggct ccggctcgcg aacttcctga cgaactgctg
     6601 gcgctggtgg acattattac gccaaacgaa acggaagcag aaaagctcac cggtattcgt
     6661 gttgaaaatg atgaagatgc agcgaaggcg gcgcaggtac tgcatgaaaa aggtatccgt
     6721 actgtactga ttactttagg aagtcgtggt gtatgggcta gcgtgaatgg tgaaggtcag
     6781 cgcgttcctg gattccgggt gcaggctgtc gataccattg ctgccggaga tacctttaac
     6841 ggcgcgttaa tcacggcgtt gctggaagaa aaaccattgc cagaggcgat tcggtttgcc
     6901 catgctgcag ctgcgattgc cgtaacacgt aaaggcgcac aaccttccgt accgtggcgt
     6961 gaagagatcg acgcattttt agacaggcag aggtgacgct tggctacaat gaaagatgtt
     7021 gcccgcctgg cgggcgtttc tacctcaaca gtttctcacg ttatcaataa agatcgcttc
     7081 gtcagtgaag cgattaccgc caaagttgaa gcggcgatta aagaactcaa ttacgcgcca
     7141 tcagccctgg cgcgtagcct caaactcaat caaacacata ccattggcat gttgatcact
     7201 gccagtacca atcctttcta ttcagaactg gtgcgtggcg ttgaacgcag ctgcttcgaa
     7261 cgcggttata gtctcgtcct ttgcaatacc gaaggcgatg aacagcggat gaatcgcaat
     7321 ctggaaacgc tgatgcaaaa acgcgttgat ggcttgctgt tactgtgcac cgaaacgcat
     7381 caaccttcgc gtgaaatcat gcaacgttat ccgacagtgc ctactgtgat gatggactgg
     7441 gctccgttcg atggcgacag cgatcttatt caggataact cgttgctggg cggagactta
     7501 gcaacgcaat atctgatcga taaaggtcat acccgtatcg cctgtattac cggtccgctg
     7561 gataaaactc cggcgcgcct gcggttggaa ggttatcggg cggcgatgaa acgtgcgggt
     7621 ctcaacattc ctgatggcta tgaagtcact ggtgattttg aatttaacgg cgggtttgac
     7681 gccatgcgcc aactgttatc acatccgctg cgtcctcagg ccgtctttac cggaaatgac
     7741 gctatggctg ttggcgttta ccaggcgtta tatcaggcag agttacaggt tccgcaggat
     7801 atcgcggtga ttggctatga cgatatcgaa ctggcaagct ttatgacgcc accattaacc
     7861 actatccacc aaccgaaaga tgaactgggg gagctggcga ttgatgtact catccatcgg
     7921 ataacccagc cgacccttca gcaacaacga ttacaactta ctccgattct gatggaacgc
     7981 ggttcggctt agatttacgc tgtcttttga tcaaattatt accatcggtt gttttcagaa
     8041 gcatgaacat tgctgctgaa gcaacagtaa taatgcccat cgtgataaac gtatagtgga
     8101 attgttcgac agtcgttgtg ccttccatcc cttcataaac gcgaaggacg gccgcactta
     8161 cagcaacgcc taaactaatc gacagttgct gcgtgaccgc cagaacactg ttaccgctgc
     8221 tggcgttgtc atcggtcaga tcggcaagtg tgatggtatt catcgcggta aattgcgtcg
     8281 acatagccat ccctaatata aacaacggca agatcagcat ccatatcgcc attgccggtg
     8341 attgcaaaga gaactgagcg atcattagcc caataatcac cgtgatcccc actaacgtat
     8401 ggcgatagcc cagacgacgt aagacttggg taaccatcga ttttgcaata atggaaccta
     8461 acgctgtcgg tgccatcata cagccggcaa taaacgcctg ataaccaaat cctacctgta
     8521 acatcaatgg cataaggaac ggtacactac cggtccccag acgggttgca atattgccta
     8581 cgataccgat cgagaaagtg cgggttttaa ataaatctaa tgaaattaat gggtttggcg
     8641 tgtgtcgcgc atggagaata tagagaagca gtaacccgat gctggtgaca attaccgtca
     8701 aggcaatcca gctggcgaca atcttttccc cgaatagctc tattccgctt gagaagagaa
     8761 caaggctgag gccaaacagc aaaaagccag tgatatcgaa tctgcgttgt gcggtggtga
     8821 aattgggcat atgtttgcgc gcgtaaagaa ggcccgcaat acctatgggg atattgatta
     8881 aaaatatcca gtgccaggtt gccctggtga ccagcacgcc gccaagaacg gggcctaaaa
     8941 ttggccccac cagacccggc atggcgacaa aattcaatac aggaagaagt tcattacgag
     9001 gataagcacg cagtaaggcc agccgagcaa caggcatcat cattgcgccg cctatcccct
     9061 gaataacccg gaagacaacc agctgtggta gcgaattaga aagtgcgcag gccagagaac
     9121 ccaacgtgaa cagactcacg gcaagggtaa aaatgcgacg cgtaccgaag cgatcggcta
     9181 gccatccgct taccggaata aacatcgcca ccgtcagcgt ataactgatg atggctgatt
     9241 gcatcgcgag aggagaacga ttaaggctat gagcgattgc gggtaaggcg gtattcagaa
     9301 tagtggcatc aagtgcctgc atgaagaagg ccatcgccgc gatccacggc aaacccgcca
     9361 tactacgctt ctttttatcg ctcattcaat gtcctgttat cgggttatca cttatcaggt
     9421 gagcgtagca gcgcctgaca agttttaaat gccgcgtcgc catcgctttg gataatcgca
     9481 tcgacaatcg cctggtgcag atccagcttt atcactgtgt cgctggtaat tgacgtgaag
     9541 taagtgtgat aaaccgaatg gaatagcgag gcgaatgagg tcaaaaacgg attggcgctc
     9601 atttcataga tatgctcatg ccaggccata tcgacttcga tccagcgttc acggcgaaag
     9661 ttctttttta atgccgccat ttcggccatt aacgtattga gatgcgcctt ctgttccgcg
     9721 gtgccaaccg ttgctgccag taggcaggct tgcggctcca gacagatacg cataaccaga
     9781 aagtgatcga tgacctgatg aaagttctct tctgtcatcc accaggtaag caattcctga
     9841 tcaagaaaat tccagtttga ttgtggcatg acccgggtac caattcgcgg tcgcggtaaa
     9901 accatccctt ttgccgttaa cgttttgacc gcttcgcgta ccgctgtacg actcactcca
     9961 aattgctcgc ccagctcaat ctcaccaggc aaaatggtgc cgggttcata ttcacctttt
    10021 aagatgcgtt gcgccagctt ctcagccaga acatacgaaa ggtttttctg tgcagctaac
    10081 tgttgtgcgc ttaaaggcat tactaatctt cctttttctt tttattcctc cttagtatgc
    10141 caccaggaag tgtgattacg gttgcaaaaa cggcaaattg cttgttttat ggcacattaa
    10201 cggggctttt gct
//
LOCUS       DADKRT010000157        10205 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.160, whole genome shotgun sequence.
ACCESSION   DADKRT010000157 DADKRT010000000
VERSION     DADKRT010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10205)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10205)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10205
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.160"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(265..1296)
                     /gene="rsmC"
                     /locus_tag="JQ356_003313"
     CDS             complement(265..1296)
                     /gene="rsmC"
                     /locus_tag="JQ356_003313"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HAY4623306.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRA
                     HTQQFHHWQVLSRQMGDNARFSLVATVDDVADCDTLIYYWPKNKPEAQFQLMNLLSLL
                     PVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWG
                     EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS
                     PKIRLTLCDVSAPAVEASRATLAANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
                     TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRA
                     IMTRQAKKG"
     gene            1399..1812
                     /gene="holD"
                     /locus_tag="JQ356_003314"
     CDS             1399..1812
                     /gene="holD"
                     /locus_tag="JQ356_003314"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HAY4623307.1"
                     /translation="MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVAN
                     DLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQ
                     VASPALTELRANPTARAALWQQICTYEHDFFPRND"
     gene            1781..2227
                     /gene="rimI"
                     /locus_tag="JQ356_003315"
     CDS             1781..2227
                     /gene="rimI"
                     /locus_tag="JQ356_003315"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HAY4623308.1"
                     /translation="MNTISSLETTDLPAAYHIEQRAHAFPWSEKNFASNQGERYLNFQ
                     LTQNGKMAAFAITQVVLDEATLFNIVVDPDYQRQGLGRVLLKHLIDELEKRGVATLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM"
     gene            2242..2919
                     /gene="yjjG"
                     /locus_tag="JQ356_003316"
     CDS             2242..2919
                     /gene="yjjG"
                     /locus_tag="JQ356_003316"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HAY4623309.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVS
                     LLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGIAKPNKKIFDYAL
                     ELAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHLEQPEGIAPTWTVSSLHEL
                     EQLLCKH"
     gene            3010..4599
                     /gene="prfC"
                     /locus_tag="JQ356_003317"
     CDS             3010..4599
                     /gene="prfC"
                     /locus_tag="JQ356_003317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HAY4623310.1"
                     /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
                     TVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
                     LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
                     ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAA
                     VGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWA
                     PAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
                     RTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
                     FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
                     SRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSM
                     VNLRLAQERYPDVQFHQTREH"
     gene            4992..5597
                     /gene="osmY"
                     /locus_tag="JQ356_003318"
                     /pseudo
     CDS             4992..5597
                     /gene="osmY"
                     /locus_tag="JQ356_003318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418793.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
     gene            5724..5885
                     /locus_tag="JQ356_003319"
     CDS             5724..5885
                     /locus_tag="JQ356_003319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HAY4623311.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLV
                     SLFMGRKRP"
     gene            6007..7080
                     /locus_tag="JQ356_003320"
     CDS             6007..7080
                     /locus_tag="JQ356_003320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HAY4623312.1"
                     /translation="MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGN
                     LIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
                     RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQ
                     WFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIAL
                     GSRIPALREDYKLGRLCGCYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVAND
                     TLVAEVIDAPQANDPTFNNEDLA"
     gene            7077..7859
                     /locus_tag="JQ356_003321"
     CDS             7077..7859
                     /locus_tag="JQ356_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY4623313.1"
                     /translation="MICRFIDTHCHFDFLPFSGDEEASLQRAAQAGVGKIIVPATEAE
                     NFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEVGLDL
                     FGDDPQLERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFS
                     GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQG
                     QPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG"
     gene            complement(8073..8936)
                     /gene="yjjW"
                     /locus_tag="JQ356_003322"
     CDS             complement(8073..8936)
                     /gene="yjjW"
                     /locus_tag="JQ356_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
                     /protein_id="HAY4623314.1"
                     /translation="MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTM
                     GRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEV
                     LSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETG
                     WEKLLPVCDGAMLDLKAWGSECHQHLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQ
                     VDYLHHIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRG
                     VSRLIFPALYL"
     gene            complement(8908..>10205)
                     /locus_tag="JQ356_003323"
     CDS             complement(8908..>10205)
                     /locus_tag="JQ356_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HAY4623315.1"
                     /translation="WLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPY
                     VRILTQDEIDVRIKRFWRYLDGTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNL
                     TFIYDPEIPPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGG
                     GSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLV
                     KEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVA
                     NTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPIIHLQTVAPHHAYYYSGI
                     SDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYR
                     AEGSRTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ"
BASE COUNT         2410 a         2666 c         2749 g         2380 t
ORIGIN      
        1 ccatcaattc ttaaaaagaa ttgctaccac ggaggcgcat tctagtggtt ttcagctttt
       61 cgtcaatagt taattatcgc cggaggtgta attgctggaa aaatgtccat caggaaacta
      121 gcgtgcaggt ttggtaggca tgcgggggca gatgccagat gcgacgctgg cgcgtcttat
      181 ctggcctacg aagggctaac gtgcaggttt tgtaggtcgg ataaggcgtt tacgccgcat
      241 ccagcaaggc ttgcggcggg atacttaacc ttttttcgcc tggcgggtca taatggcgcg
      301 atataccttg aaacgcccgg tttgcgcaat cacttcatgg aagccaaatg tttcatccag
      361 cacgtccgga taaggcagga aggcgttcgc tacaattcgc agctcgccgc cactattaag
      421 atgacgcacc gcgccgcgaa tcagcgtttg cgccgcatcc aggctggttt gcatcccatc
      481 gtggaacggc gggttggaga tgatcatatc aaaacgacct ttcacctcgg aaaagacgtt
      541 gctggcaaag acttcacctt caacacagtt ggccgcaagt gttgcgcggc tggcttctac
      601 cgctggcgca gagacatcgc acaaggtgag acgaattttc ggcgaatggc gcgcaaaggc
      661 aactgaaagc acccccgcgc cacagccgac atccagcact ttacctttcg tgtgcggagt
      721 taacgtcgag agcagcaact ggctaccgac atccagaccg tcgcggctaa acacgccagg
      781 cagcgttttg accgtcaggc catcgacgct gtattcgccc cagaatttat cggcatcaaa
      841 taccggctgt ttttccagac gaccaaaata gaggccacag cgacgagcgc tgtcgacttt
      901 attcaacggc gcataatctg ccagcatctg ctcggcgctg cgcacgccgc tgcggttctc
      961 gccaacgaca aaaatatctg tccccactgg cagcagagaa agtaaattca tcaactggaa
     1021 ctgggcttcc ggtttgttct tcggccagta gtaaatcagc gtatcgcaat ctgcgacgtc
     1081 atccaccgtg gcgaccagac tgaaacgggc gttatccccc atctggcggc ttaatacctg
     1141 ccagtggtgg aattgctggg tatgagcacg gctggccgcg gtatctaaac gcgcgggcag
     1201 gtcatcctgt aagtctccgg caaacagaat acggctttgt tcgaaatcat cactgtgacg
     1261 cagcaagact tcacttgccg gggtaaatgc agacatggaa tgctcctcaa ttgatactgg
     1321 cggcgattat agccatatgt tggcgcggta tcgacgaatt tgctatattt gcgcccctga
     1381 caacaggagc gattcgctat gacatcccga cgagactggc agttacagca actgggcatt
     1441 acccagtggt cgctgcgtcg ccctggcgcg ttgcaggggg agattgccat tgcgatcccg
     1501 gcacacgtcc gtctggtgat ggtggcaaac gatcttcccg ccctgaccga tcctttagtg
     1561 agcgatgttc tgcgcgcatt aaccgtcagc cccgatcaag tgctgcaact gacgccagaa
     1621 aaaatcgcga tgctgccgca aggcagtcgc tgcaacagct ggcggttggg tactgacgaa
     1681 ccgctatcac tggaaggcgc tcaggtggca tcaccggcgc tcaccgaatt acgggcaaac
     1741 ccaacggcac gcgccgcgtt atggcaacag atttgcacat atgaacacga tttcttccct
     1801 cgaaacgact gatttaccag cggcttacca cattgaacaa cgcgcccacg cctttccgtg
     1861 gagtgaaaaa aactttgcca gcaaccaggg cgagcgttat ctcaactttc agttaacgca
     1921 aaacggcaaa atggcggcgt ttgcgattac gcaagtggtg ctggatgaag ctacattgtt
     1981 caatattgtg gtcgatcctg actatcagcg tcagggattg ggaagggtgc tgctgaaaca
     2041 tctgatcgac gaactggaaa aacgcggcgt ggcgacacta tggctggaag tccgtgcttc
     2101 aaacgctgcc gccattgccc tgtacgaaag tttaggcttt aacgaggcga cgattcgccg
     2161 caattactac cccaccacgg acggtcgcga agacgccatc atcatggcgt tgccaatcag
     2221 tatgtaagac aaggtggaat aatgaagtgg gactggattt tctttgatgc cgatgaaacg
     2281 ctgtttacct ttgactcatt caccggcctg cagcggatgt ttcttgatta cagcgtcacc
     2341 tttaccgctg aagattttca ggactatcag gccgttaaca agccactgtg ggtggattat
     2401 caaaacggcg cgatcacttc attacagctt cagcacgggc gtttcgagag ctgggccgaa
     2461 cggctgaaag ttgaagcagg cttgcttaac gatgccttta ttaatgcgat ggcggaaatc
     2521 tgcacgccgc tgccgggcgc ggtttctctg cttaacgcca ttcgtggcaa cgctaaaatc
     2581 ggcatcatca ccaacggttt tagcgccttg cagcaagtgc gtctggaacg gacgggcctg
     2641 cgtgattact ttgatttgct ggtgatttcc gaagaagttg gcattgccaa accgaataag
     2701 aaaattttcg attatgcgct ggaactggcg ggcaatcctg accgttcacg cgtgctgatg
     2761 gttggcgaca ctgccgagtc cgatattctc ggtggcatca acgccgggct tgcgacttgc
     2821 tggctgaatg cgcaccatct cgagcaacca gaaggcatcg cgcccacctg gaccgtttca
     2881 tcgttgcacg aactggagca gctcctgtgt aaacactgat tgcctccccc ccgttgatgg
     2941 gtaaaatagc cgcaattttt cgttttcaac aagcgcggcg cgatgccgct tactcaagaa
     3001 gaaagaatta tgacgttgtc tccttatttg caagaggtgg cgaagcgccg cacttttgcc
     3061 attatttctc acccggacgc cggtaaaact accatcaccg agaaggtgct gctgttcgga
     3121 caggccattc agaccgctgg tacagtaaaa ggccgtggtt ccaaccagca cgctaagtcg
     3181 gactggatgg agatggaaaa gcagcgtggg atctccatta ctacgtctgt gatgcagttt
     3241 ccgtatcacg attgcctggt taacctgcta gacaccccgg ggcacgaaga cttctcggaa
     3301 gatacctatc gtaccctgac agcggtggac tgctgcctga tggttatcga cgctgcaaaa
     3361 ggtgttgaag atcgtacccg taagctgatg gaagttaccc gtctgcgcga cacgccgatc
     3421 ctcaccttta tgaacaaact tgaccgtgat atccgcgacc cgatggaact gctcgatgaa
     3481 gttgagaacg agctgaaaat cggctgcgca ccgatcacct ggccgattgg ctgcggcaag
     3541 ctgtttaaag gcgtttacca cctttataaa gacgaaacct atctttatca gagcggtaaa
     3601 ggccacacga ttcaggaagt ccgtattgtt aaagggctga ataacccgga tctcgacgct
     3661 gcggttggtg aagatctggc acagcagcta cgtgacgaac tggaactggt gaaaggcgcg
     3721 tctaacgagt tcgacaaaga actgttcctt gcgggcgaaa tcactccggt attcttcggt
     3781 actgcgctgg gtaacttcgg cgttgatcat atgctggatg gcctggtgga gtgggcccct
     3841 gcgccgatgc cgcgtcagac tgatacccgt accgtagagg cgagcgaaga caaatttacc
     3901 ggcttcgtat ttaaaattca ggccaatatg gacccgaaac atcgcgaccg cgtggcgttt
     3961 atgcgcgtag tatccggtaa atatgaaaaa ggcatgaagc tgcgccaggt gcgtactgcg
     4021 aaagatgtgg ttatctccga cgcgctgacc tttatggcgg gcgaccgttc gcacgttgaa
     4081 gaagcgtatc cgggcgatat cctcggcctg cacaaccacg gcactattca gatcggcgac
     4141 acctttaccc agggtgagat gatgaagttc accggtattc cgaacttcgc accagaactg
     4201 ttccgtcgta tccgcctgaa agatccgctg aagcaaaaac agctgctcaa agggctggta
     4261 cagctttccg aagagggcgc ggtgcaggtg ttccgtccga tctccaacaa cgatttgatc
     4321 gttggtgctg ttggtgtgct gcagtttgat gtggtggtat cgcgcctgaa gagcgaatac
     4381 aacgttgaag cagtatatga atcagtcaac gttgccactg cccgctgggt agaatgtgcg
     4441 gacgcgaaga aattcgaaga gttcaagcgt aagaacgaaa gccaactggc gcttgatggc
     4501 ggcgataacc tcgcttacat cgctaccagc atggtcaacc tgcgcctggc gcaggaacgt
     4561 tatcccgacg ttcagttcca ccagacccgc gagcattaat tcttgcctcc agggcgcggt
     4621 agccgctgcg ccctgtcaat ttcccttcct tattagccgc ttacggaatg ttcttaaaac
     4681 attcactttt gcttatgttt tcgctgatat cacgagcggt ttcaaaattg tgatctatat
     4741 ttaacaaagt aatgacattt ctgacggcgt taaataccgt tcaatgcgta gatatcagta
     4801 tctaaagccg tcgattgtca ttctaccgat attaataact gattcagagg ctgtaatggt
     4861 cgttattcat cacccatcgc ttttgtgatg gcggccattg acttctgtag agggtgaagt
     4921 ctctccctat tcagcaatgc aacctcgtgt tgccaggctc aaattacgag caaacataca
     4981 ggaataaatc gatgactatg acaagactga agatttcgaa aactctgctg gctgtaatgt
     5041 tgacctctgc cgtcgcgacc ggctctgcct acgcggaaaa caacgcacag actaccaatg
     5101 aaagcgcagg gcaaaaagtc gatagctcta tgaataaagt cggtaatttc atggatgaca
     5161 gcgccatcac cgcgaaagtg aaggcggcgc tggtggatca tgacaacatc aagagcaccg
     5221 atatctctgt caaaaccgag caaaaagtcg tgaccctgag cggtttcgtt gaaagctagg
     5281 ctcaggccga agaggcagtg aaagtggcga aaggcgttga aggggtgacc tctgtcagcg
     5341 acaaactgca cgttcgcgac gctaaagaag gctcggtgaa gggctacgcg ggtgacaccg
     5401 ccaccaccag tgaaatcaaa gccaaactgc tggcggacga tatcgtccct tcccgtcatg
     5461 tgaaagttga aaccaccgac ggcgtggttc agctctccgg taccgtagat tctcaggcac
     5521 aaagtgaccg tgctgaaagt atcgccaaag cggtagatgg tgtgaaaagc gttaaaaatg
     5581 atctgaaaac taagtaattc gtcgtaattc gtcctcccga actttgtcgg gaggcgcgat
     5641 gtgcaccaca ctaaaaatat cgcattgagt gattttcacg ctcatatcaa gcggtgacat
     5701 taactatggt aaaggagacg cttatgtttc gttggggcat catatttctg gttatcgcgt
     5761 taatcgccgc cgcacttggg tttggtggtt tggccggtac cgctgcaggc gcagctaaaa
     5821 ttgtctttgt cgtcgggatt attctgttcc tggtgagttt gttcatgggc cgaaaacgac
     5881 cctagatttc agaccattaa gaaaatttta tccaaagcca gtccagcgga ctggcttttg
     5941 cggttttagc gaataataaa ttgcgttact ttgtcattct ttcacaacaa aaacaggaag
     6001 gcagaggtgg ggcagcgaat acctgtaacg cttggtaata ttgcgccgtt gtcgctaagg
     6061 ccgttccagc ctggacgaat agctctggtg tgcgaaggcg gcggacagcg tggaattttc
     6121 acggctggcg tgctggatga gtttatgcgc gcgcagttta atcctttcga tctttatctc
     6181 ggcacatctg ccggggcgca gaacctctcg gcgtttatct gcaatcagcc cggttacgcg
     6241 cgtaaagtca tcatgcgcta taccacaaaa cgcgaatttt tcgatccatt gcgctttgtc
     6301 cgtggaggaa atcttatcga tctcgactgg ctggtggagg ccaccgcaag ccagatgccg
     6361 ttgcaaatgg ataccgccgc gcggttgttt gacagcggca aatcgtttta tatgtgcgcc
     6421 tgtcgtcagg atgactacgc gcctaattac tttttaccaa ccaaacaaaa ctggctggat
     6481 gtgattcgcg cctccagtgc gatacctggc ttttatcgta gcggagtgtc gctggaaggc
     6541 attaactacc tggatggcgg gatcagtgat gcgattccgg ttaaagaggc ggcaaggcag
     6601 ggcgctaaaa cgttggtcgt cattcgcact gtgccgtcac aaatgtacta cacgccgcag
     6661 tggttcaaac gcatggaacg ctggctgggt gacagtagcc tgcagccgct ggtcaatctg
     6721 gtgcagcatc atgaaaccag ctatcgtgac attcagcaat ttattgagaa accaccgggc
     6781 aagctgcgga tattcgaaat ttatccgccg aagccattac atagtatcgc gcttggcagt
     6841 cggattccgg cgctgcgtga agactataaa cttgggcgtt tatgcggttg ttatttcctc
     6901 gccacggttg gcaagctatt aactgaaaaa gcgccgctta cccgccatct ggtgccagtg
     6961 gtgacgccgg aatcgatcgt tattccgcct gcgccagtcg ccaacgatac gctggttgcc
     7021 gaagtgattg acgctccgca ggcgaacgac ccgacattta acaatgagga tctggcttga
     7081 tttgccgttt tatcgacacc cactgccatt ttgatttcct gccgtttagt ggcgatgaag
     7141 aggccagcct gcaacgcgcg gcacaagcgg gcgtaggcaa gatcattgtt ccggcgacag
     7201 aggcggaaaa ttttgcccgt gtgcaggcgt tagcggaaaa atatcaaccg ctgtatgccg
     7261 cattgggctt gcatccaggt atgttggaaa aacatagcga tgtgtctctt gagcagctac
     7321 agcaggcgct ggaaaggcgt ccggcgaagg tggtggcagt gggggaggtc ggtctggatc
     7381 tcttcggcga cgatccgcaa cttgagaggc agcagtggtt actcgacgaa cagctgaaac
     7441 tggcgaaacg ctacgatctg ccggtgatcc tgcattcacg gcgcacacac gacaaactgg
     7501 cgatgcatct taaacgccac gatttatcgc gcactggcgt ggttcacggt ttttccggca
     7561 gcctgcaaca ggccgagcgg tttgtacagc tgggctacaa aatcggcgta ggcggtacta
     7621 tcacctatcc acgcgccagt aaaacccgcg atgtcatcgc aaaattaccg ctggcatcgt
     7681 tgttgctgga aaccgacgcg ccggatatgc cgctcaacgg ctttcagggg cagcctaacc
     7741 gaccggaaca ggctgtgcgg gtgtttgacg tgctttgcga gttgcgcccg gaaccagaag
     7801 atgagattgc cgaagtgttg cttaataata cgtatgcgtt gtttagcgtt agtgggtagt
     7861 ttacccttcg taggcagtat ccggcagtcg gcgcataatg cctgatgcga cgcttgtcgc
     7921 gtcttatcat gcctacaggt ttgtgccgaa ccgtaggccg gataaggcgt tcacgccgca
     7981 tccggcagtt ggcgcacaat gcctgatgcg acgcttgtcg cgtcttatca tgcctacaag
     8041 tctgtgccga accgtaggcc gtatccggca tgtcacaaat agagcgccgg aaatatcaac
     8101 cggctcaccc cgcgcacctt taacgcatca gccaacggct caacgtcttc cggcgtggcg
     8161 ctcgcccagc tttgcgcctc gccatacacg ccgtgggcat gaaacgcatt caggcgaacc
     8221 ggaacatcgc caagtctctt gataaacgtc gccagctcat cgatgtgatg caaataatcc
     8281 acctggtctg gaattaccag caaacgcagt tccgccagct tgccgcgctc tgcaagcaaa
     8341 cagatgctgc gcttaatctg ctgattatcg cgtccggtta agtgttgatg acattcgctc
     8401 ccccacgctt tgagatcgag cattgcgccg tcacacaccg ggagtaattt ttcccagccg
     8461 gtttcgctca acatgccgtt actgtccacc aggcaggtga ggtggcgcag ttgcggatcg
     8521 tttttgatag cagtaaacag cgccactaca aacggcagtt gggtcgtggc ttcgccgccg
     8581 cttaccgtta tcccttcaat aaacagcacc gctttgcgga catggctaag cacttcgtcc
     8641 acgctcatgg attgcgccat tggcgtggca tgttgcggac acatcttcag gcaggtatca
     8701 cactgctcgc agaccacagc gttccacagc actttgccgt caacaatctg caacgcctga
     8761 tgcggacact gtggcacgca ctctccgcaa tcattgcagc gtcccatcgt ccacggattg
     8821 tgacagtttt tgcagcgcag attgcagccc tgcagaaaca gagccagacg actgcctggc
     8881 ccgtcaacgc aggagaaggg gataatctta ctgactaaag cgcatctgct gttcatggct
     8941 tatcacgcgc ggctggcgtt ccagaatacg agtgttgcgt gtggcttctt cgcccagcca
     9001 ggtggtgttg gtgcgtgaac cttcggcgcg atatttttct aaatccgaca aacgcaccat
     9061 ataaccggta acgcgaacca gatcgttacc gctgacattg gcggtaaatt cacgcattcc
     9121 ggctttaaag gcaccgaggc aaagctgtac cagcgcctgc ggattacgtt tgatggtttc
     9181 gtcgagcgtc agaatgtcgc tgatgccgga ataataataa gcatgatgcg gggcgacagt
     9241 ttgcagatgg atgatcggat ctggctcatc gccatacggc aaacgcgcgc ccggcgtggt
     9301 gccgatatcg gaactgatcc ccgactgtgc gtgtaacatg gcgcgttttt gccagccata
     9361 tttcacgggg gtattggcga caaactccgc cagttgcgcg ctgatgcgat aacccacttc
     9421 atttgcggcg gcttctttac cgtagcgcgc ggcaatccct tctttctcac acagcaagtt
     9481 aaccgcttcc gccagcccat acatgccaaa cattggcaca aaacgttcag ggttaatcag
     9541 cccttctttc accaggaagc tattctcaaa gaagtgtgat tgttgataga ggaattcaca
     9601 ccgcgcatcg atgatggcga tctgctgctg gcagtagtgc ggtagagtgc gcgtaaagaa
     9661 gtcatccagc gattcgctgc gctcggcaat ggctttcagg ttaaggcgta ccagcgtgct
     9721 gccaccaccc gccagcggca gtgagttgta acagctcaca atcccgtagc ccccttttgt
     9781 gaaaatttta tcatgcaccg gaccgttggc gatgtgcggt ttgctacatt cacagatgtt
     9841 cttcgccact tccagcagca ggtcatcagg ggggatttca ggatcgtaga taaaggtcag
     9901 gttcggtgaa acctgcttca actctgcgtc tgcacgtaag atcgcgcggg taatgggcga
     9961 atcagacggg ccgatattgg cgtgcataaa ggcgtctggc agggttccgt cgaggtaacg
    10021 ccagaaacgt tttattcgaa catcgatctc gtcttgtgtt agaattctaa catacggttg
    10081 caacaacgca tccagttgcc ctaggtagac cggcatcgat gtgaccgacg gtacgtggtg
    10141 gtaaagaatg gtcagcagag agagtgcgtc atcaagatct ttcgcgcctt ccagctccag
    10201 ccatt
//
LOCUS       DADKRT010000158        10146 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.161, whole genome shotgun sequence.
ACCESSION   DADKRT010000158 DADKRT010000000
VERSION     DADKRT010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10146
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.161"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..236
                     /locus_tag="JQ356_003324"
     CDS             <1..236
                     /locus_tag="JQ356_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4623316.1"
                     /translation="TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLV
                     YEKTYTAELSSIAGTPIEAGPFDTVVLFKINYN"
     gene            388..1434
                     /locus_tag="JQ356_003325"
     CDS             388..1434
                     /locus_tag="JQ356_003325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HAY4623317.1"
                     /translation="MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG
                     ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAANWPIVLAILLVTLLSSAIVGWLL
                     VRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTCM
                     MLGDNAEAVNQQIVWFPPVSINLLLTILLAVVAGTAGCMLRLPSGTMLIPMLAGAVLQ
                     SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM
                     AWGLTRFMHIDFMTAYLATSPDGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA
                     IARFISTYAPKRSA"
     gene            complement(1431..2222)
                     /gene="nei"
                     /locus_tag="JQ356_003326"
     CDS             complement(1431..2222)
                     /gene="nei"
                     /locus_tag="JQ356_003326"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HAY4623318.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQH
                     VTHVGTRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL
                     LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
                     QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE
                     NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
     gene            complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="JQ356_003327"
     CDS             complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="JQ356_003327"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HAY4623319.1"
                     /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
                     REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
                     VKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
                     ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLH
                     GDGEHALAFARRLRSTFAEKEIVVAA"
     gene            complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="JQ356_003328"
     CDS             complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="JQ356_003328"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpC"
                     /protein_id="HAY4623320.1"
                     /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV
                     GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL
                     KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLNVGIGGLEGRLLKDGDRLPIGKSKRDFM
                     EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSPQSNRMGYRLQGQILKR
                     TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ
                     PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN"
     gene            complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="JQ356_003329"
     CDS             complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="JQ356_003329"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HAY4623321.1"
                     /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV
                     EAIPGMNNITVILRNPESLALDAIELLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
                     AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
                     GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
                     "
     gene            complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="JQ356_003330"
     CDS             complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="JQ356_003330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HAY4623322.1"
                     /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT
                     GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTDLDVTFIDIPNPA"
     gene            5601..7082
                     /gene="dtpD"
                     /locus_tag="JQ356_003331"
     CDS             5601..7082
                     /gene="dtpD"
                     /locus_tag="JQ356_003331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HAY4623323.1"
                     /translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND
                     THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
                     LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY
                     AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
                     LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
                     SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
                     SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY
                     SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
     gene            complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="JQ356_003332"
     CDS             complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="JQ356_003332"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HAY4623324.1"
                     /translation="MTTHLVWFRQDLRLHDNLALAAACSNSSARVLALYIATPRQWAT
                     HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY
                     NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
                     RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN
                     GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
                     IWREFYRHLMTYYPSLCKHCPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL
                     NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
                     AAPYFRIFNPTTQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWAQKAGVMLDYPQP
                     IVDHKEARLRTLAAYEEARKGA"
     gene            complement(8539..9048)
                     /locus_tag="JQ356_003333"
     CDS             complement(8539..9048)
                     /locus_tag="JQ356_003333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HAY4623325.1"
                     /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
                     LAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGY
                     FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
                     INLRHSGVL"
     gene            complement(9333..9719)
                     /locus_tag="JQ356_003334"
     CDS             complement(9333..9719)
                     /locus_tag="JQ356_003334"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623326.1"
                     /translation="MWNDIFTKLSIAILLAFSAYVHAETSAPIFFEDVGSIDSWFSIK
                     YQKYENVKDEQYPEILIYYGVKGSGINRVDGWFFSCAKAGRTCSLIFMADFGESRYFK
                     PAKIAMNKNNLIIRTSDVEIAFKITK"
     gene            complement(9692..>10146)
                     /locus_tag="JQ356_003335"
     CDS             complement(9692..>10146)
                     /locus_tag="JQ356_003335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY4623327.1"
                     /translation="LGLIDKPAPVFNRDLNSDPYYLAVNNCYSYALNRYGNPGSRIFG
                     GGGLQPGELSGKEFSKLTCGSIFEASKNDGAKDLDNGSCPSGYHKAQLFIRPHNFIGM
                     GGDYHWYRQDANGEWSDKQGVGAIRFRGKDPFPPIDYPEKCGTIFLPN"
BASE COUNT         2364 a         2754 c         2440 g         2588 t
ORIGIN      
        1 aaacgttggt tgaagaagat aaagcattgt tgattggtaa tggtctgaag ctacgtttgc
       61 tggatgaaaa cgcctcgcct tataccttca ataaatatgc tgaatacgcc gatttcacca
      121 gcgacatgtt ggtctacgaa aaaacctata cagctgaact ttcgtccatt gcaggtaccc
      181 ccatcgaggc tgggcccttc gatacagtgg tgctttttaa aattaactat aactgatttg
      241 ccatgatgcc ctttgcagcc ggaaagggca tctctttcag aaaattgctg attttcctct
      301 tttccttgat tactgttatt ttttcctggc ccggctttct ttatgctgta tcgatacacc
      361 aaagagaaaa taatgaggga gcgaaggatg ccagttttgc agtggggaat gttatgtgtg
      421 ctatcacttc tcctttctat tggtttcctc gcggtacatc tcccggcggc gctattactt
      481 gggccgatga tcgccgggat catcttcagt atgcgcggaa ttactctgca acttccccgc
      541 tccgcttttc tcgccgcgca ggccattctt ggctgcatga ttgcgcaaaa cctcactggt
      601 tcgattctca ccacgctggc cgccaactgg ccgatcgtgc ttgctatttt actggtgacg
      661 ctgctttcca gcgccatcgt gggttggtta ttggtgcgct atagctcact gcctggaaat
      721 accggtgcct ggggttcttc tccaggcggc gcagcggcaa tggtcgctat ggcgcaagat
      781 tacggcgcag atattcgcct ggtggcgttt atgcaatatc tgcgagtgct gttcgtcgcg
      841 ggggccgctg ttctggtcac ctgcatgatg ctgggtgata acgctgaagc ggttaaccag
      901 caaatcgtct ggttcccgcc agtgagcatt aatctcctgc ttacgatttt gctcgcagtc
      961 gttgccggta cggcgggatg catgctgcgt cttccttccg gcacgatgct catcccgatg
     1021 ctggcgggcg cagtgctcca gtctggtcag ctcatcacca tcgaactacc ggaatggctg
     1081 ctggcgatgg cgtatatggc aattggctgg cggattggtc ttggtttcga taaacaaatc
     1141 ttactgcggg cactacgccc actaccgcaa atcctgctgt cgatttttgc tctgctggct
     1201 atttgtgcag gtatggcgtg gggactgacc cggtttatgc atattgattt tatgactgcc
     1261 tacctcgcca ccagtcccga cgggcttgat accgtggcgg tcatcgccgc agggagcaat
     1321 gccgatatgg cgcttattat ggcgatgcaa accctgcgcc tgttcagtat tttgctgacg
     1381 gggccagcca ttgcgcggtt tatttcaacc tatgcgccga agcggtcggc ctagtgctgg
     1441 cagcctggac accagtaaaa cgggcgcgag gacaacgtgg ttttctcaat gatgccgcca
     1501 cagcgttcgc acagttcgcc atcacgatga aaaaccttaa agcgaaacag cgccccatga
     1561 tgcttattct catccacctg cccccgcgta gcgtaagaaa accgaggaat ctccagtaac
     1621 gcgtgtgcga gtgcatccag ttgcgccgca ttgagatctt tcgctttatg atttccagtc
     1681 aacccaacct gccagaggat ctccacccgc aaataattgc caagcccagc cagaaacgcc
     1741 tgatcgagca gtaatcctgc aaactgacgg ttacgaaagc gcggtgacaa taaccgttcc
     1801 tttaccacct ccggcgtcag attcggatcc agcacatcgg gaccaacgcg ttgtaaaaac
     1861 ggatgcgtgg tcagttgttc cggcctcaac atctcaatat ccgaggcgct ataaagcaga
     1921 atggttttgt cagccgtttg cagttttacc cgcaatactc gcgtggtctg cggctcttcg
     1981 ccggtatcaa ccacgcgcca gacgccgtaa agctgattat ggctgtagag cgttaagtcg
     2041 ttggaaaaat gagttaacaa cgccttacca cgcgttccca catgggtaac gtgttgaccg
     2101 ataagttgtg attgataagt ttttaactgc gggaaggcaa accagacatc agttagtggt
     2161 ttgcctttga tcgccgcctc caggttatcc gctgcacggc ggatctccgg gccttcaggc
     2221 atggtgatat ccttttttca ttctttatta atcggggtta tgctgcgaca acaatctcct
     2281 tttcggcaaa tgtagagcgt agtcggcggg cgaacgccag tgcgtgctcg ccgtcgccat
     2341 gcaggcagac tgtttgcgcc gtgaccgttg cccattcgcc ggtgatactt ttgactctgc
     2401 cgtgttgcac catctctagc gtttgcgcca gcgcctgttc ttcgttttca atcaacgcgc
     2461 ctggctgact tcgcggcacc agcgagccgt cagcctgata accgcgatcg gcaaacactt
     2521 cctcgcgcgt tgtcaggcca tattgcttgc ctgcacgaat cagctcgctt cctgccagcc
     2581 caacgagaac caatgctgga tcgcaagcgt ataccgctct ggcgatggcg tctgccagtt
     2641 gtgcttcttt cgccgcctgg ttgtacaaca tgccgtgcgg tttgacatga cgcattacgc
     2701 cgccttgcgc acgggcaatc gttgccagcg cgccaatttg atacagcgtc tgggcgtaaa
     2761 cggtttctgg cggcagctgc atggcgctgc gaccaaaatt ttccctgtcg ggaaaactcg
     2821 ggtgagcgcc aatcgcgaca ccatttttta ttgcttcacg cacgcaagcc tgcatggttt
     2881 gggcatcgcc tgcatgaaat ccacaagcaa tattggcaga ggaaaccagc gttaatagct
     2941 ctgcgtcgct ggcgcagcct tcgcccagat cggcgttcag gtcaattttc attgtgtagc
     3001 cgccacgcta attgttcgaa ataacgttgt tgatcttgcc gcgctttcag tgcctcttcc
     3061 agtgaacact ggacaaaatg aatcggctga ccgagcggaa tttgcgccag atggtacata
     3121 tcagcctcaa tgatacaggc aatacgcggg taaccaccgg tggtctgtgc gtcgttcatc
     3181 aacacaatcg gctgcccgtt atgcggcacc tgcaccacac ccggtaacaa accgtgagat
     3241 aacagttcgc gatcggtggt gcgttttaaa atttgcccct gtaagcgata gcccatgcgg
     3301 ttactttgcg ggctaagctg ccagggcgaa cgccagaatg catcctgcga ggcgcgatcg
     3361 aactcatgat attccggccc cggcaaggcg cgaatgcggt tgccccacag cagctgttta
     3421 acgccctgcg cttccataaa atcacgcttc gatttgccaa tcgggagtcg gtcaccatcc
     3481 ttcagtaaac ggccttccag cccgccaatc cccacgttga gatcggtgct gcatgacccc
     3541 attaccggcg gaacatcaat accacccgcg accgccagat aactgcgcat gccgtgctgc
     3601 gggcgtttaa gcgttaaacg ctggcctgct ttcatcggca agcgccagcc ggtccagacg
     3661 gcgttatcat ccagccgcgc ttcgcaaccg gcacccgtca gagcaaacca cccatcagtt
     3721 tcgaactcaa ccgttaactg accgagcgtg atctccagcg cgggggcatt ggcgtcatta
     3781 cccaccagca ggttagcaat gcgtaacgca ggcatatcca gtgcgccgca gtggctgata
     3841 cccgactggc gaaaaccgtg acgaccgcca tcctgcacag tggtatacat gcccgcacga
     3901 ataatcttca gcatactccc tccttctgcg gtacaaagcg cacgctgtct cccggacgta
     3961 ataagatggg ttcgtcacgc gccggatcaa acaggctgag tgaggtatga ccaatcaact
     4021 gccagccacc cggcgttgcc agcggataaa caccagtctg cggcccgccg atcccgacag
     4081 aacctgccgg aacgagcaag cgcggttcag cgcgccgtgg cgtgtgtagt tgttccggca
     4141 aactcccgag atacgggaag cccggttgaa aacctaaaaa ccagaccacg tattccacgg
     4201 aggagtgcaa ttcaacaacc tgtttttcgc tcaacccgca atgcgccgcg accaccgcca
     4261 aatccggtcc gcctgcacca ccgtaaacca ccggaatttc aataaagcga gactcaggtt
     4321 ccagggcctc gctctcctcc caccagcgtt gcaaaagctc tatggcatcc agcgccagcg
     4381 actcaggatt acgcaaaatc accgtgatat tgttcatgcc gggaatggct tcaaccacat
     4441 tcggcatatc caccagacgc tgcgccagtc gccagatccg tttctggcta gccagcgtca
     4501 ccggcggttc cagttccagc actaccgccg tttcacctat cagataacaa cgcgctcgtt
     4561 gcactttcga tccctctgat tattcgttat gcaggattag gaatatcaat aaaggtcaca
     4621 tcaagatcgg tattttcatt cagccactcg ctcaatgcgc gaataccacc acgttcagtg
     4681 gcatggtgac ctgcagcata aaaatgcaat ccctgctcgc gggctgaatg aatggtctgt
     4741 tcagaaactt cgccagtaat aaaagcatcc acgccaaaac gcgcggcgct atcgataaaa
     4801 ctttgcccgc cgcccgtgca ccaggcgacg cgctggacca cctcaggtcc ggtatcgcca
     4861 caccataacg gcttacgtcc cagacgcgct tcaatccagg aggctagttc cagtcccggc
     4921 acaggcatgg tcagctctcc ccacggcacc aacggctcaa tttcgcccat gaccgtgatc
     4981 cccagtaacg ccgccagctg tgcgttattg cccagctcag gatgtgcgtc aagcggcaaa
     5041 tgccagccat acaggttgat atcattcgcc agcaacgttt ttaaacggtt acgcttcatt
     5101 ccgcgaatga ccggagactc tcctttccag aagtagccat gatgcacaat gaccgcatcc
     5161 gcgcccagac gcactgcctc atcgagcaaa gcctggctgg cggtgacacc ggtaacaatt
     5221 ttttgcaccg tctctttgcc ttccacctgc aaaccattcg gcgcgtaatc actaatcgcc
     5281 gcgctgttca gtttttcgtt aatcagttgt tccagttcgg tgtttttcat cttcgcgcct
     5341 tccgtattct gatagctaca ccgttaacat agcgttacct cgcctgttcg tcgatagcca
     5401 atcttttgac atattaagaa acaaacccga cgccaaaaga cgcaaattgt ttatatcatc
     5461 acgcttcagc taatgtatat ttatgcaatc agacagcata ttgcataaat aatcagatct
     5521 gtatcaaagt tttaacttta aggaaacaca agcacgccgc gcaactatta cgtgacgttg
     5581 ccgtcaattg tggaattatt atgaataaac acgcatcaca gccgcgcgct atttactatg
     5641 tcgttgcgct gcaaatctgg gaatatttta gcttttacgg catgcgtgcc ctgctgattc
     5701 tctatctcac caatcaacta aaatacaacg atactcacgc ctacgagtta tttagcgcct
     5761 actgttcgct ggtgtatgtc acgccaatcc tcggtggctt tttggcggat aaagttctcg
     5821 gcaatcgcat ggcggtgatg ctgggggcgt tattgatggc gatcggtcat gtggtgttgg
     5881 gtgccagtga gatccatccg tcattcctct atctgtccct ggcgataatt gtttgtggct
     5941 atggtctgtt taaatccaat gtcagttgcc tgctcggcga gctgtatgag ccaaccgatc
     6001 cgcgtcgtga tggcggtttc tcgctgatgt atgcagcggg taacgtgggg tctattatcg
     6061 cacctattgc ctgtggctac gcccaggaag agtacagctg ggcgatgggc tttggcctgg
     6121 cggcggtggg tatgatcgcg ggtctggtca ttttcttatg tggcaatcgt catttcacac
     6181 atacccgcgg cgttaataaa aaagtactgc gtgcgacaaa ctttctcctg cctaactggg
     6241 gatggctgct ggttctgctg gtggcaacgc ctgcgctgat taccgtattg ttctggaaag
     6301 agtggtcggt atacgcctta attgtcgcga ctattattgg cctgggtgta ctggcaaaaa
     6361 tttatcgcaa agcagaaaac cagaaacagc gtaaggagct ggggctgatt gtgacgctca
     6421 ccttcttcag tatgttgttc tgggccttcg cacaacaggg cggcagctcg attagccttt
     6481 atatcgaccg cttcgttaac cgcgatatgt ttggttatac cgttccgact gctatgttcc
     6541 agtcgattaa tgccttcgca gttatgctgt gcggtgtgtt cctggcgtgg gtggttaaag
     6601 aaagcgtcgc aggtaatcgt accgtgcgca tctggggaaa atttgctctt ggtctcggcc
     6661 tgatgagcgc cgggttctgc attctgacct taagcgcccg ctggtccgca atgtatggtc
     6721 actcttctct gccactgatg gtattaggcc tggcggtgat gggctttgcg gaactgttta
     6781 tcgacccggt tgccatgtcg caaattacgc gcattgaaat ccccggtgtg accggcgtat
     6841 taaccggcat ttatatgctg ctttccggcg cgattgcgaa ctatctcgcg ggcgtgattg
     6901 ccgatcagac atcgcaggct tcgtttgatg cttccggggc gatcaactac tccatcaatg
     6961 catatattga agtatttgat caaattacct ggggcgcact ggcgtgtgta ggactggtac
     7021 tgatgatttg gctgtatcag gcgctgaaat tcagaaaccg cgcgctggcg ctggagtcat
     7081 aataggccag caccatacct gataaaacgc tcgctgcgtt ttatcaggct cctttcctcg
     7141 cttcttcgta cgctgccagc gttcgcagcc ttgcctcttt gtgatcaact atcggttgcg
     7201 gataatccag catcacacct gctttctgcg cccacttcca cggctcatgc accgctttcc
     7261 ctggtacatc gcgcagctcc ggtaaccatc gacgaataaa ctcgccctca cggtcaaatt
     7321 tctcgccctg ggttgtcggg ttgaaaatac gaaaatacgg cgctgcatcg gttccggttg
     7381 aagcggccca ctgccagcca ccgttattgg ctgccaaatc accatcaatc agctgcgaca
     7441 tgaaatatcg ctcgccttcg cgccagtcga tcaacaaatc tttcaccaga aaactggctg
     7501 taatcatccg tagccggtta tgcatccagc cagtgctgtt aagctgacgc atggcagcat
     7561 cgacaatcgg gtatcccgtt ttgccttcct gccaggcctg taaatgtgcg ggattgctct
     7621 gccactgcac acgatccgtc caggcaataa acggacaatg tttacacaac gaggggtaat
     7681 acgtcatcag atgacggtag aactcgcgcc agatcagctc actaagccag acactaccgg
     7741 ccccaccgtc cagcgcctgc ggctgttccg ccaacaagcg atgcaaacac tggcgaggcg
     7801 ataacccgcc cgttgccagg ctggcggaca aacgactggt gccttccact gccggaaaat
     7861 ctcgttgttg ctcatattct ccggcaccgt tctggcaaaa ctggcgtaat tgcgcaatcg
     7921 ccgctttttc ttccaccggg aaatgcgcag tatcgaaaga ctgacgagga taattcagcg
     7981 taatggatgg cgagggctct atcgatccgc tactacgaac ttttggcgca gcgacgcact
     8041 ccggcatccc ttcccgcagc cgtttcagcc aggcattctt aaaaggcgta aagactttgt
     8101 acatctcgtg attaccggtc atcaccgcgc caggcggcag gatcacgctg tcatcaaatc
     8161 cttcacacac cacgttacgc agcgctcttt caacttccac atcccgcgcc cgctcattca
     8221 cttcatactg atagttataa aacaggtggg taacgctgtt ttccgcgcac acctgtttaa
     8281 ctatttcgac actggcgaca aagtcatcca cttcacggaa caataaagga ataccttttt
     8341 ccgcaagcgc tatttgtagc ccattcagtt gagcattgat aagttcagcc tgacgcggcg
     8401 acatgttatg cgtcgcccac tggcgtggtg tagcgatata caacgccagc acgcgtgcag
     8461 acgaattgct gcaggcggca gccagtgcga gattatcgtg caaacgtaaa tcctggcgaa
     8521 accagaccag atgggtagtc ataaaactcc tgaatggcgc aagttaatca cacgcggcca
     8581 aagttcgaaa taacgctgcc ctgaaagcca ggcgtcagga taaagcgcca tatagtgttt
     8641 gatacgcatc agcggcgcaa gaagtggttg ctcgccacgg cgataactgt cgataagcgc
     8701 agccagctgc tggcgttctg tggaatcaat atgcgggcga aaataaccct gaacgtgcat
     8761 caaaacattg gtgtgatcgc gcgggttggc ggggtgagaa agcaaaacaa ctacgcgttg
     8821 gcggtactgg ttgtaatagt catccagatt ttgccactgg tgaatatcag ccacgaacgg
     8881 gccaagtttg cggtactccg gctgagaatg cgccagaaag acgagtttat agcggctgtg
     8941 ataatcgaga agcgccccgc gcgttaagcc atgttctttc agtcggtgta actcatgaag
     9001 ggcaaagata cggattaggg tgctgtcatc aaatcgttgt agattcatta ctgctcctga
     9061 acggtataaa ggagtaagtg tagacgatgg taaatgaatt ttatggggca gagtttttgc
     9121 ggggaagtat tttgttggta aaaatattat caacttcatc tgagcgagaa ttattctact
     9181 atttcccgag ctgcattcat tttttgtatt ttttattttt agaaaataac agttctcaaa
     9241 gcttaattac ctcactatta attgtatttc aaactaacaa tcgcactcca ttttctctct
     9301 ttaaaaaaca taaacactgt taaaacaaat atttatttcg ttatcttaaa tgctatttct
     9361 acatcactcg tccttataat caaattattc ttattcatag ctatttttgc aggtttaaaa
     9421 tagcggcttt caccaaagtc agccatgaaa attagactac aagttctccc agcctttgca
     9481 catgagaaaa accacccatc aactctattt attcctgaac ctttaacacc ataataaatc
     9541 agaatttctg ggtattgttc atccttcacg ttttcatatt tttggtattt aattgaaaac
     9601 caagagtcta tactgccaac atcttcaaaa aatattggag ctgatgtttc cgcatgaaca
     9661 tatgcagaaa atgctaacaa aatggcaata cttagtttgg taaaaatatc gttccacact
     9721 tttcaggata atctattggg gggaagggat cttttcctct aaatctaatt gctcccactc
     9781 cttgtttgtc agaccattcg ccatttgcat cctgacgata ccagtgataa tcccctccca
     9841 tgcctataaa attgtgagga cgaataaaca attgagcttt atggtaacca gatggacaac
     9901 tcccattatc taaatccttg gcaccatcat tttttgacgc ttcaaaaata ctaccgcaag
     9961 tgagtttaga aaactctttt ccagataatt ctccaggttg taatcctccg ccgccaaaaa
    10021 tcctactccc agggtttcca tacctattta gagcatatga ataacaatta tttacggcaa
    10081 gataatacgg atctgaattt aggtctcgat tgaatactgg agcaggttta tcaattaagc
    10141 ccagcg
//
LOCUS       DADKRT010000159        10119 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.162, whole genome shotgun sequence.
ACCESSION   DADKRT010000159 DADKRT010000000
VERSION     DADKRT010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10119
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.162"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            207..359
                     /gene="hokA"
                     /locus_tag="JQ356_003336"
     CDS             207..359
                     /gene="hokA"
                     /locus_tag="JQ356_003336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokA"
                     /protein_id="HAY4623328.1"
                     /translation="MPQKYGLLSLIVICFTLLFFTWMVRDSLCELHIKQGRYELAAFL
                     ACNLKE"
     gene            complement(547..759)
                     /gene="cspA"
                     /locus_tag="JQ356_003337"
     CDS             complement(547..759)
                     /gene="cspA"
                     /locus_tag="JQ356_003337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HAY4623329.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(1040..1330)
                     /locus_tag="JQ356_003338"
     CDS             complement(1040..1330)
                     /locus_tag="JQ356_003338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HAY4623330.1"
                     /translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
                     TGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
     gene            1763..2473
                     /locus_tag="JQ356_003339"
     CDS             1763..2473
                     /locus_tag="JQ356_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HAY4623331.1"
                     /translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
                     VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTP
                     ADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
                     AQHQAFNQAWTTAVTATQ"
     gene            complement(2523..3497)
                     /gene="ghrB"
                     /locus_tag="JQ356_003340"
     CDS             complement(2523..3497)
                     /gene="ghrB"
                     /locus_tag="JQ356_003340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HAY4623332.1"
                     /translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
                     EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
                     VADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
                     GAEQFAKMKPSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
                     MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
     gene            complement(3601..4260)
                     /locus_tag="JQ356_003341"
     CDS             complement(3601..4260)
                     /locus_tag="JQ356_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HAY4623333.1"
                     /translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLDSL
                     VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
                     GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
                     NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
                     L"
     gene            4413..6746
                     /locus_tag="JQ356_003342"
     CDS             4413..6746
                     /locus_tag="JQ356_003342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HAY4623334.1"
                     /translation="MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQ
                     SAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVHVSWDEALDLIHQQHKRIR
                     EAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
                     GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKL
                     ICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYA
                     VFASYLLGESDGIAKTAEWAAGICGVHAAKIRELAALFHQNTTMLMAGWGMQRQQLGE
                     QKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRCSAVLSSMQGSLPGGSDAVDK
                     IPVARIVEALENPGCAYQHNGMNRLFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
                     VVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDF
                     DVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQL
                     IEMPENPDSERFIRFADFCRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLEP
                     DEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDALARGIQD
                     GDTVRLWNARGQILAGVVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDL
                     PSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS"
     gene            complement(6715..7155)
                     /locus_tag="JQ356_003343"
     CDS             complement(6715..7155)
                     /locus_tag="JQ356_003343"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY4623335.1"
                     /translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAY
                     LANAQNWVWEEDSKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLML
                     EVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
     gene            complement(7152..7715)
                     /gene="tag"
                     /locus_tag="JQ356_003344"
     CDS             complement(7152..7715)
                     /gene="tag"
                     /locus_tag="JQ356_003344"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HAY4623336.1"
                     /translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
                     LQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHVVGCCCYPGNKP"
     gene            7873..8571
                     /locus_tag="JQ356_003345"
     CDS             7873..8571
                     /locus_tag="JQ356_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY4623337.1"
                     /translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHS
                     TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
                     VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQI
                     SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTN
                     NSDYLYTMGVSARF"
     gene            8799..10001
                     /locus_tag="JQ356_003346"
     CDS             8799..10001
                     /locus_tag="JQ356_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4623338.1"
                     /translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
                     VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMML
                     WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
                     TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
                     LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
                     IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
                     LNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
                     KMLREAHI"
BASE COUNT         2428 a         2435 c         2591 g         2665 t
ORIGIN      
        1 atttttttag gattatatca aggagaagaa acaaacttat taagctagaa tagctacggg
       61 tgcttgagac tgtttgtctc aggtattcac cgaaaggcag acagagaaaa gccccacctg
      121 actataaatc aaagtgaggc taccctatgc ctgaacacca taaggttagc ctcttactcg
      181 ttggaaatca acacaggggg ctgggaatgc cgcaaaaata cggattactt tcattaatag
      241 tgatttgttt cacgctttta tttttcacct ggatggtaag agattcactg tgtgaattgc
      301 atattaaaca ggggcgttat gagctggcgg catttttagc ctgcaattta aaagagtaag
      361 agtcttcggc gggaaattat tcccgccttt cttacggcgt tgcgcattct cattgcaccc
      421 acatttattc ttcacaaaaa taataataga ttttactacg cgatcgatta tttatttcct
      481 gaaaaaaaat aaaaaaaatc cccgccaaat ggcagggatc ttagattctg tgcttttaag
      541 cagagattac aggctggtta cgttaccagc tgccgggcct ttagcgccgc tttcgatggt
      601 gaaggacact ttctgacctt cgtccagaga tttgtaacca tcgttctgga tagcagagaa
      661 gtgtacgaac acatctttag agccatcgtc aggagtgatg aagccgaagc ctttgtcagc
      721 gttgaaccat tttacgatac cagtcatttt accggacata gtgtattacc tttaataatt
      781 aagtgtgcct ttcggcgata tggcgtgctt tacagatttt gaagcgttaa aggaatgtgc
      841 actacgaggg gtatcaacga taactcttga agggacttgc cttactacac tgctttaatg
      901 gtctgtacgt caaaccgttg atgtgcatta agccacgcat tggcgggtga tgcaacaatt
      961 atttttcata tttatgatta atcggttgga aaacggtcct gtcatcagga ccgtaaacag
     1021 caataaagtg gataaaagtc tattccatca actgcttact taatgccggg ttggcttgaa
     1081 tcaaacgcat caattttagt tcggcacttg aaggcttcac gcgtctggat tcccattcct
     1141 ttaccatggc gactgatatg cccaaaaccc gggcgaaatc atcgattttt aaccctgtcc
     1201 cttttcgtaa ctgctcaatt tcggtacagg acgttgttct gtgcgtcagg gtaattttct
     1261 gcgtttcatc tttaaaaaca atctgttcca ggctgctcaa cagctcatgc attggatctt
     1321 tatattccat tgaaaactcc tcaaatcaca ctgcgggatc gtgaattgca tcgaagctca
     1381 ttaagaatag tcgggaaaag cagacacagc ggggtgaagt cagggcatgc tctggctatg
     1441 attcgattca gccagtcatt tagcgtgact tatagccacc taacgatctg ataaatgccg
     1501 atatatctct taccactcct gttttgtaaa gatttcgaaa atctaaagtt ctgcgaaggc
     1561 gtaaatctcg ggctacaaaa aagcaacggc aatatcattt tttaacaatg aaacaacaaa
     1621 ttaaccttgt ttcattttct ccatgatttt accaggaaga ttacgtagaa agggtatcct
     1681 gcaagcctgt cctggactat ccttgtcacg tcagacacgc gtgtgtcgtt gtgcgctttt
     1741 tttgggtgaa aggagtaaga aaatggcgac aggaaagtcc tgctctcgct ggtttgcgcc
     1801 tcttgcggcg ttattaatgg tagttagcct gagtgggtgt tttgataaag aaggcgatca
     1861 gcgtaaagcg tttatcgact tcctgcagaa tacagtgatg cgtagcggtg aacgtctacc
     1921 aaccctgact gccgatcaga aaaaacagtt tggtcctttt gtctctgatt acgcgattct
     1981 gtatggttat tctcagcagg tgaatcaggc gatggattcc ggtctgcgcc cggtcgtaga
     2041 cagcgttaac gcaattcgcg taccgcagga ttacgttacg caaagcggtc cgctgcgtga
     2101 aatgaacggt tcgctgggtg tgctggcgca acaactgcaa aatgcgaagt tgcaggccga
     2161 tgctgcgcac tctgcgctaa aacagaccga tgatttgaaa ccggtctttg atcaggcatt
     2221 caccaaagtg gtaacgacgc cagctgatgc attgcaaccg ttgattccgg ttgcacaaac
     2281 tttcacgcaa caactggtga tggttggaga ctacattgct caacaaggta ctcaggtgag
     2341 ctttgtagca aatggtatcc agttcccgac ttcgcagcag gcaagtgaat ataacaaact
     2401 gattgcgccg ttaccggcac aacatcaggc gtttaatcag gcctggacta cagcagttac
     2461 tgcaacccaa taaagagtaa aagcccgagc gattatcggg ctttacttca cgcagtcgcg
     2521 gcttagtccg cgacgtgcgg attcacacag ttcttctcaa cctttccttg taacgcatca
     2581 atcaaattat ccacggcaca ggcggccatg ccataacgcg tctcatgggt ggcagatcca
     2641 atatgcggta ctgcgacgac gttggccatt gagagcaacg gcgaatctac ggacagtggc
     2701 tcttgttcga agacatccag cccggcggcg tgaatttcgc ctttctgcaa tgctgcgatc
     2761 agtgcatttt cgtcaaccac cgggccacgt ccggcattaa tgaaaatggc ggagggtttc
     2821 attttggcga attgttctgc gccaaacaga tgatgcgtct catcagttaa cggcaggatc
     2881 aggcaaacga aatctgactc ttgtaacaga gtatccaaat cgcagtagcg ggcgttgaag
     2941 cgttcttctg cttctttatg gtggcggcgc gcgttataga ggatgggcat gttgaagcca
     3001 aagtgcgcac gttgtgccag cgccatgccg atccgtccca tcccgacaat gcccagtgtt
     3061 ttatggtgaa cgtcagtgcc gtaccagtcc gggcctatgc tcgcggtcca ttcgcctgct
     3121 tttacccgtt ctgctacctc cacaacccga cgagcggtag acaacaccag cgccatcagc
     3181 gtatcggcga cggtttctgt taatacggtt ggcgtgtgca tcagcagaat ttttcgggcg
     3241 gtaagcgcat cgacatcaaa attgtcatag ccgacggaga tcgttgatgt ggcacgcagt
     3301 ttcggcattt tttccagcaa tgcggcatct acattctcgt ttgaacccag taaaccttca
     3361 gcttcggcaa aaattgctgc attttgttcg acggtttgtg ggctgaggtt tgccacctgg
     3421 tgaacggtga aatgctcttg caggcgttgc agtaaatcat caggtaaggc tttgtagagg
     3481 ataacggacg gcttcatgct tctctccatt cactgataag gcgctcacct tagcctgaaa
     3541 tatgatgaag gaaaactgaa gaatgccagg tgatttctgc atcacctggc atgaaaggga
     3601 ttacagcggg cttaaggtaa tttctacacg gcggttttgc gccttacctt ctgcggtgct
     3661 gttgctggcg attgggttag ccgggccaag gccctgagta cggatgcggc tggcgtccac
     3721 gccctgggtg atcaacgcgc tggcaacgga atccgcacgc tgctgggaga gacgcatgtt
     3781 caggtcgtga ccccccgtgc tgtcggtata accaatcacg ttaaccgccg ttttcggata
     3841 ctctttcagc accattgcca cgccggtcag ggtgttagcg cctgccggtt tcagggtcgc
     3901 gctgctgctg tcgaaggtca cattgttcgg catattgagg ataatgttat ccccgctgcg
     3961 ggttacgcta acaccagtgc cgcgcatttt gtcacgcagc ttcgcttcct gcacatccat
     4021 gtaataaccc acgccgccgc ccagagctgc gcctgctgct gcgccaatca gcgcgccttt
     4081 accgcgatct ttcttcgaag aagagagcgc accaataccc gcgcccacga gagagtccag
     4141 acctgcgccg atagcagatt tgcctgcttc gcgttcgccg gtgtaagggt tagttgtgca
     4201 gccagatacc gccagagcgc cactcactac ggcggcaata agataaacac gtttcttcat
     4261 tgttaatcct taataacctt tttattcttt gccacgggtt ccgtggcggg agattatgcc
     4321 gcgtgaacat gaagattatt cctgggaata ctcggaaatt tgtaagtaat atttaactgc
     4381 tcaatacatc taacctttca ggagtcttcg gtttggccaa ctcatcctca cgatattccg
     4441 ttctgactgc cgcccactgg gggcccatgc tggttgaaac cgacggcgaa accgtgttta
     4501 gctcgcgtgg cgcgttagcc acaggaatgg aaaactcctt gcagagcgcg gttcgcgacc
     4561 aggttcacag caatacgcgg gtacgatttc caatggtgcg caaaggcttt ctcgcgtcac
     4621 cggaaaaccc gcaaggcatt cgtgggcagg atgaatttgt tcacgtgagt tgggatgagg
     4681 cgctggatct tattcaccaa caacataaac gcattcgtga ggcttatggt ccggcatcga
     4741 tttttgctgg ttcctacggc tggcgttcaa acggcgtgct gcataaggcc tcgacattat
     4801 tacaacgcta tatggcgctg gcaggcggtt ataccgggca tctgggggat tattcgaccg
     4861 gtgcggcaca ggcgatcatg ccgtatgtcg tgggtggcag cgaagtttat caacagcaaa
     4921 ccagttggcc gctggtgctg gaacatagcg atgtcgtggt gttgtggagt gctaacccac
     4981 tcaatacgct gaaaattgcg tggaatgcat ctgatgagca ggggctttct tacttttccg
     5041 cactgcgtga cagcgggaaa aagctgatct gtattgatcc aatgcgatcg gaaaccgtcg
     5101 atttctttgg cgataaaatg gagtgggtgg caccgcacat gggcaccgat gttgcgctga
     5161 tgctggggat cgcccatacg ctggtggaaa atggttggca cgacgaagcg tttctggcgc
     5221 gttgcaccac aggttatgcc gtcttcgcct cttatttgct gggcgagagt gacggaatag
     5281 ccaaaaccgc cgaatgggcg gcagggattt gtggggttca cgcagcgaaa attcgcgagt
     5341 tggcggctct tttccaccaa aacacgacca tgctgatggc tggctgggga atgcagcgcc
     5401 aacagcttgg tgagcaaaaa cactggatga tcgtcacgct ggcggcaatg ttggggcaaa
     5461 tcggcacacc cggcggcggt tttggtcttt cttatcattt tgccaatggt ggtaatccca
     5521 cgcggtgttc tgcggtgctc tcttccatgc agggtagctt gccgggtggc agcgatgcgg
     5581 tagataaaat ccctgttgcc cgtattgttg aagcactgga aaaccctggc tgcgcatacc
     5641 aacacaatgg catgaatcgc ctcttcccgg atattcgctt tatctggtgg gcgggtggcg
     5701 ccaacttcac ccatcatcag gacactaatc gcctgatacg agcttggcaa aaaccggagc
     5761 tggtagttat ctccgaatgc ttctggacgg cggcggcaaa acacgcggat atcgttctgc
     5821 ctgcgactac ctcttttgag cgtaatgatc tcaccatgac cggcgattac agtaatcagc
     5881 atctggtgcc gatgaagcaa gtggtgccgc cacgctatga agcgcgtaat gattttgatg
     5941 tttttgccga gttaagtgaa cgctgggaga agggcggtta tgcacgtttt acggaaggaa
     6001 aaagtgagtt gcaatggctg gaaacgtttt ataacgttgc ccgacagcgc ggggcaagcc
     6061 agcaggttga attgccgcca tttgctgagt tctggcaagc caatcagtta attgagatgc
     6121 cggaaaaccc ggacagcgag cggtttattc gcttcgctga tttttgccgc gatccgcagg
     6181 cgcatccatt aaaaaccgcc agcggtaaga ttgaaatctt ctcgcagcgt attgccgatt
     6241 acgcttatcc ggattgcccg gggcatccaa tgtggctgga gccggacgaa tggcagggca
     6301 atgccgaacc ggaacagtta caggtacttt ctgctcatcc ggcgcatcgt ctgcacagcc
     6361 agctgaatta cagttctctg cgcgaattgt atgcggtggc aaatcgtgag cctgtcacca
     6421 ttcatcctga cgatgccctg gcgcgcggca ttcaagatgg cgatactgtt cggctgtgga
     6481 acgcacgcgg gcaaattctt gccggagtgg tcattagcga gggaattaaa cctggcgtga
     6541 tttgtattca cgaaggggca tggccggatt tggatttaac cgctgacggt atttgtaaaa
     6601 acggcgcagt caacgtgctg accaaagatc tccccagctc gcggctgggg aatggctgtg
     6661 cgggtaatac ggcgctggca tggctggaaa aatacaacgg tccggaactg acacttacag
     6721 cgtttgaacc accggccagc tcataatcca ggtgggtagt tgggtttcat cctgccatgc
     6781 gcaatcgaca atgtgaaaac cctgcgcctg gtaaaaattt atcgccggtt gatttttttg
     6841 ataaacctcc agcatcaggt ggggatggcg ctgctgcaca tattgcatca gcgccttacc
     6901 aataccgcgc ctgacggcct tcggtgcgac aaacatcgct gccagaaatc ggccttccat
     6961 aatgctgaca aaaccgagaa gcttactgtc ttcttcccag acccagtttt gcgcattggc
     7021 aagatacgca tcccgcacca gcggaatgca atcacgccag taattcgctt ttataaaggg
     7081 atgtccccag gttgtacttt ccagccacag ttcgaggatc gcggggagtt ctgaacgttg
     7141 cgcttcccga atcatggttt atttcccgga tagcaacagc agccaaccac atgatcattc
     7201 accagcccac atgcctgcat aaaggagtaa cagattgtgg taccgacaaa cttaaaacca
     7261 cgttttttca gtgctttaga tagggcgtcg gaggcgggcg tagatgtggg gatttcgctc
     7321 aacgttgtgg cttgtgtcac ctgtggctga tgatttacaa acgaccagac aaagtcggca
     7381 aacggttcgc cgttctgttc catttgcagg tacgcccgcg cattaccaat aattgcctga
     7441 attttcccgc gatggcggat aatcccggcg tcctgtacca gtctttcgac atcctcttcc
     7501 tgcattgctg cgaccttcac cggatcgaac tgatgaaagc aggcgcgata gttttcgcgt
     7561 tttttgagga cggtgatcca cgataaccca gcctgctgcc cttcaaggca gatcatttcg
     7621 aacagttttt tactgtcagt ttcaggcacg ccccactcat tatcatggta ggcaatataa
     7681 agcgggtcct gactcaccca gccgcaacgt tccatacttt ccctcgctat gtacccgatc
     7741 gtaaaaattt cagccgcttt tcttgacgca tcggtgaaaa agtcaatatt taatacaggg
     7801 ctactatgcc cgatatcctt catacaatga caataatatt gccgaattcg gctcttccct
     7861 ggagtcgtgt taatgatcat aaaaaaaagc ggtggtcgct ggcagctaag cctgctggcg
     7921 agcgtggtaa tcagcgcctt ttttctcaac acagcttacg cctggcaaca agaatatatc
     7981 gttgatacgc aacccggaca ttccacagag cgttacacct gggatagtga tcatcaacct
     8041 gattacaacg atattttgtc gcaacgtatt caaagtagcc aaagggcgct gggactggaa
     8101 gtcaatctgg cggaagaaac tcctgtggat gtgaccagca gtatgagtat gggctggaat
     8161 tttcctttat atgaacaggt tacaaccggc ccggtcgcgg cattacatta cgatggcaca
     8221 accacctcga tgtataacga gtttggcgac agtactacca cgctgaccga tccgttatgg
     8281 catgccagcg tgagtagctt aggctggcgt gttgactccc ggcttggcga tctccgaccc
     8341 tgggcgcaaa tcagctataa ccagcaattt ggcgagaata tctggaaggc gcaatcaggc
     8401 ctgagccgga tgacggcgac aaaccagaac ggcaactggc tggatgtcac cgtaggcgct
     8461 gatatgttgc tcaatcaaaa tattgccgcc tatgccgcgc taactcaggc agaaaatacc
     8521 actaataata gcgactatct gtatacgatg ggggttagcg ccagatttta acgtaacagt
     8581 cacaattgaa accattgaat aacaatagtt gtggtgatag tgggtgctaa cttacaaata
     8641 ataaatttgg tgaataattg tcgcgtcatt cattcctgaa ctaaggcatt tcattccgtt
     8701 ctgatggcat ttcatgccgt ttttccccag gcataaaatg cacttcgtta tggttgtcgg
     8761 cagagatttt tcctttttat tactgcagga atactgccat gacaccttca aattatcagc
     8821 gtacccgctg gctgacactc atcggtacta tcattaccca gtttgcgctg gggtcggttt
     8881 atacctggag cctgtttaat ggcgcgcttt ctgccaagct ggatgcgccg gtaagccagg
     8941 tcgctttctc tttcggcttg ttaagtctgg ggctggcaat ttcatcttct gttgcgggga
     9001 aattacagga acgttttggc gttaaacgcg tcactatggc ttccggcatt ttgctaggat
     9061 taggcttctt cctgacagcg cattctgaca acctgatgat gctgtggtta agcgccggtg
     9121 tgctggtcgg tctggcggat ggcgcgggtt acctgctgac gctctctaac tgcgtgaagt
     9181 ggttcccgga gcgtaaaggt ctgatctccg cgttcgctat cggttcttat ggtcttggta
     9241 gcctgggttt caaatttatc gacacgcagc tgctggaaac ggtgggtctg gaaaaaacat
     9301 ttgtgatttg gggagcgatt gcgctggtga tgattgtttt cggcgcaacg ttaatgaaag
     9361 acgcaccaaa acaggaagtg aaaaccagca atggtgtggt ggagaaagat tacacgctgg
     9421 cagagtcgat gcgtaaaccg cagtactgga tgttagcggt aatgttcctg actgcctgca
     9481 tgagcggcct gtacgtgatt ggggtagcga aagatatcgc ccaaagtctg gcacaccttg
     9541 atgtggtttc cgcagccaat gcagtaacgg ttatttccat cgctaacctt tcaggtcgtc
     9601 tggtgctggg cattctgtct gacaaaattg cccgtatccg tgttatcacc attggtcagg
     9661 tgatttcgct ggtgggtatg gcggccctgc tgtttgcacc attaaatgca gtgacgttct
     9721 ttgcagcgat tgcctgcgtg gcatttaact ttggcggcac tattaccgtc tttccatcac
     9781 tggtcagtga gttcttcggc ctcaataacc tggcgaaaaa ctacggtgtg atttacctcg
     9841 gtttcggtat cggtagcatt tttggttcga ttatcgcctc actgtttggc ggtttctatg
     9901 tgaccttcta cgtgattttc gccctgctga ttctgtcatt ggcgctttct acgacgattc
     9961 gtcagccaga gcagaaaatg ttgcgtgagg cgcatattta gaaatatgtt gctactgaaa
    10021 taaatacgag gagggagact tcaaagtctc ccttttttat ggacgcatat taaaagaaca
    10081 ataatattca taccacaaat atattttatt tatatatta
//
LOCUS       DADKRT010000160        10058 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.163, whole genome shotgun sequence.
ACCESSION   DADKRT010000160 DADKRT010000000
VERSION     DADKRT010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10058
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.163"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..206
                     /locus_tag="JQ356_003347"
     CDS             <1..206
                     /locus_tag="JQ356_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623339.1"
                     /translation="STLKSPSYTKSVSWQHYRHICCYRRKLTDAELEACYRYDKQFWE
                     HYSKKCRWPIRNVPWGASSVKYS"
     gene            complement(323..1666)
                     /gene="gdhA"
                     /locus_tag="JQ356_003348"
     CDS             complement(323..1666)
                     /gene="gdhA"
                     /locus_tag="JQ356_003348"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013366584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HAY4623340.1"
                     /translation="MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPK
                     YRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVN
                     LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSESEVMRFCQALMTELYRHLGA
                     DTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYF
                     TEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTK
                     EKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVGAAHQ
                     LIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLG
                     WKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
     gene            1902..2174
                     /locus_tag="JQ356_003349"
     CDS             1902..2174
                     /locus_tag="JQ356_003349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HAY4623341.1"
                     /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
                     CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLLWRRVKP"
     gene            complement(2140..2547)
                     /gene="nudG"
                     /locus_tag="JQ356_003350"
     CDS             complement(2140..2547)
                     /gene="nudG"
                     /locus_tag="JQ356_003350"
                     /EC_number="3.6.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP pyrophosphohydrolase"
                     /protein_id="HAY4623342.1"
                     /translation="MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVELDES
                     QQQALVRELNEELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV
                     WCSPEEALQYPLAPTDIPLLEAFMALRAARAAD"
     gene            2634..3245
                     /locus_tag="JQ356_003351"
     CDS             2634..3245
                     /locus_tag="JQ356_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416272.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HAY4623343.1"
                     /translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP
                     FLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFIL
                     AAPEQNALAGGWLLFAFISTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
                     ILLFVLGCLFPAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ"
     gene            complement(3254..4561)
                     /locus_tag="JQ356_003352"
     CDS             complement(3254..4561)
                     /locus_tag="JQ356_003352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HAY4623344.1"
                     /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID
                     TRPSAFYNGWPQTLNGPSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALY
                     GNDKDVDAVKTRLQKAGFTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV
                     TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH
                     GIRHDTTVILYGRDVYAGARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV
                     KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE
                     IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS
                     ETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK"
     gene            complement(4628..5281)
                     /locus_tag="JQ356_003353"
     CDS             complement(4628..5281)
                     /locus_tag="JQ356_003353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY4623345.1"
                     /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
                     SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
                     STLKGTARRNAVKDALDRAGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEP
                     FSRLDVALRDNFRQWVFSEVRELAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR"
     gene            complement(5281..6816)
                     /locus_tag="JQ356_003354"
     CDS             complement(5281..6816)
                     /locus_tag="JQ356_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4623346.1"
                     /translation="MVTPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQAL
                     FADPQLPHALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVA
                     FATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKRL
                     LQQVIVLDSLGYSRWQCLNWLLLPSVAPSLAMAMLAIVAWSLSVVDVAIILGPGNPPT
                     LAVISWQWLTQGDADQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGIRKP
                     ATPLLPGTTLASFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLL
                     LWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLNLDGSWTAVVWGHLLWVMPWML
                     FILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCTLMLRPVLIAFAVGFSVSIAQYMP
                     TLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALAAKWVGYVRQ
                     GLR"
     gene            complement(6789..7955)
                     /locus_tag="JQ356_003355"
     CDS             complement(6789..7955)
                     /locus_tag="JQ356_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY4623347.1"
                     /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDT
                     AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE
                     NFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
                     VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA
                     TFARVTAPLWQYLDALHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI
                     ASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPVV
                     WDDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH"
     gene            complement(7965..8513)
                     /locus_tag="JQ356_003356"
     CDS             complement(7965..8513)
                     /locus_tag="JQ356_003356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HAY4623348.1"
                     /translation="MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV
                     SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVAD
                     WRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLS
                     ARFNSAMDIPAQGLCRIPEKRS"
     gene            complement(8513..9220)
                     /locus_tag="JQ356_003357"
     CDS             complement(8513..9220)
                     /locus_tag="JQ356_003357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY4623349.1"
                     /translation="MMKMQSRKIWYYCITLIILLFAMLLAWALLPGVHEFINRSVAAF
                     AAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLS
                     WTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
                     DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTV
                     VIFMAKKIWLERQKRND"
     gene            complement(9235..9912)
                     /gene="ydjY"
                     /locus_tag="JQ356_003358"
                     /pseudo
     CDS             complement(9235..9912)
                     /gene="ydjY"
                     /locus_tag="JQ356_003358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416265.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein YdjY"
     gene            complement(9917..>10058)
                     /locus_tag="JQ356_003359"
     CDS             complement(9917..>10058)
                     /locus_tag="JQ356_003359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY4623350.1"
                     /translation="RFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKN
                     EG"
BASE COUNT         2404 a         2742 c         2594 g         2318 t
ORIGIN      
        1 caagcacctt aaaatcacca tcatacacta aatcagtaag ttggcagcat taccggcata
       61 tctgctgcta tcgcagaaag ttaacggatg ctgaacttga agcgtgttat cgttacgaca
      121 agcagttttg ggagcactac agtaagaaat gccgttggcc cataagaaat gttccctggg
      181 gagcatcatc cgttaaatac tcataaacgc ctgaaatttt gccgggggcg ctgcgcttgc
      241 ccggcctaca ttagagcgta actgcaatga attgtgccca tttgtaggcc tgataagcgt
      301 agcgccatca ggcatttaca acttaaatca caccctgcgc cagcatcgca tcggcaacct
      361 tcacaaaacc ggcaatgttc gcgccctgca cgtagttggt ttgctcacct tcaccaccat
      421 gctcaacaca ggcatggtgg atatccagca tgatgtgatg caaacgtgcg tcaactttct
      481 cggctttcca gcccaggcgc gcagcgtttt gcgccatttc aaggcctgac gttgctacac
      541 cgccagcatt agccgcttta cccggtgcaa acagtacgcc tgcctgctgg aacagttcag
      601 tcgcttcgat ggtggtcggc atatttgccc cttcggcgac ggctttaacg ccattggcga
      661 taagctgatg cgcggcgcca acatccagtt cgttctgggt ggcgcaaggc agggcgatat
      721 caaccggtac agaccacggc tgttggcctt cgagatagac cagaccaaat tctttggcgt
      781 aatctgccac tcgaccatcg cggctggctt tgatttcgat aagacgtgcc agtttctctt
      841 tcgtgaatcc gctttcatca actacagtgc cgctggagtc tgacgcagtg atcacacgag
      901 caccaaattc catcgctttt tcgatagcgt actgggcgac gttgccggag ccagaaacgg
      961 aaacgcgcat cccttcaaaa cccataccgt ggcgttttaa cattgcttct gtgaaataaa
     1021 ccagaccgta gccggtagct tccgggcgaa taagactacc gccaaatgaa aggcccttac
     1081 cggtgaagac gcaggcggta ttgttggaga gctttttcat catccccgcc ataaagccga
     1141 cttcacgacc accaacgccg atatcacctg ccggaacgtc agtatccgcg cccagatgac
     1201 gataaagctc ggtcatcagc gcctggcaga aacgcatcac ttcgctttcg cttttacctt
     1261 tcgggtcaaa atcgctaccg cctttaccac cgcccatcgg cagggtagtc agggcatttt
     1321 tgaaggtttg ttcgaagccg aggaatttga gaatggagag gttaactgac ggatggaagc
     1381 gcataccgcc tttgtacggg ccgatggctg agctgaactg cacacgccat gcacggttga
     1441 cctgtacctg gttgcgatca tcaacccata ccacgcgaaa ctggatcacg cgctccggtt
     1501 caaccagacg ctccagtaat gacatctggc gatattttgg attttgttca agaaaaggcc
     1561 agagtgtggt cattacttca cgaacggctt gcgcgaactc ggtttgattc gggtcgcgct
     1621 tttggacatg gttgaggaat gactccagag aatatgtctg atccatagat ataaaaccct
     1681 tatatattaa tacgattgtg cttatgttgt ttatgtcatg tgcttttgca gttttcgact
     1741 ataccatcaa gaatgtgacg gtaagcaaga aaaaaatgac ccaggaaagc aaattaataa
     1801 cgagagtaat ctcataacca aatgcgataa ctcagacgct aaagttttgc cacccggcta
     1861 ccgttatcag ttgcagagac aataacgtta aggagttccc tgtgagtcga gcattgttcg
     1921 ccgtagtatt agcatttcca ttaattgcac tggctaaccc gcattatcgt ccggacgtgg
     1981 aggtaaacgt accgccagaa gtgttcagtt caggcgggca gtcagcgcag ccctgtactc
     2041 agtgctgcgt ttatcaggat caaaattatt ctgaaggggc ggtaattaaa gccgaaggaa
     2101 tactgctgca atgccagcgg gatgacaaaa cccttagcac taatccgctg ctctggcggc
     2161 gcgtaaagcc ataaacgcct ctaatagtgg aatgtcagta ggggccagcg gatattgcag
     2221 cgcctcttca ggtgagcacc agaccagcgc ctgatgttca tgtgcctgta acgtcccgtg
     2281 gaagtcgggt acgtgccagg catgaagatg gataatccgg cccgaaactt ctcgctgatg
     2341 gctggcaaca tactcaccca cagttgcttc gatgcccaat tcttcgttta actcacgcac
     2401 cagtgcctgc tgctggcttt catccagctc gactttacca ccggcaaact cccataatcc
     2461 cgcctgatcg ctctgggcgg ggcgttgcgc gagtaaaatt ttgccatcac gttcaatgat
     2521 ggcggcaaca acttcaatca ttttcataaa ttacacacgg gcagataagc gaaaaatgcc
     2581 ataatatccg cactgttgct caatcagaaa ggctttatat ttaaggagtg cctgtgctag
     2641 accgccatct tcatccccgg attaaaccgt tgttgcatca gtgcgtgcgg gttcttgata
     2701 aaccgggcat tacgccagat ggtttaacat tagtgggatt tgccatcggc gtgctggctc
     2761 tgccgtttct ggcgctgggc tggtatctgg cggcgctagt cgtcattttg ttgaacaggc
     2821 tgcttgatgg tctggacggt gcgctggcgc ggcgcagaga gcttaccgac gcgggcggct
     2881 ttcttgatat ttctctcgat tttctctttt acgcgctggt gccgtttggc tttattcttg
     2941 ctgcaccgga gcaaaatgcg ctggcaggcg gctggttgtt gtttgcgttt atcagcacgg
     3001 gcagcagttt tctcgccttt gctgcactgg cagcaaaaca tcagattgat aaccccggtt
     3061 atgcacataa gtcgttttac tatctggggg gattaaccga aggcacagaa acgatcttac
     3121 tgtttgtgct gggatgttta ttccctgcat ggtttgcgtg gatcttcggt gcgttgtgct
     3181 ggatgacgac ctttacgcgg gtgtggagtg ggtatctgac gctgaagtcg ctccagcgtc
     3241 agtaattgca atgttatttg ctactgtccg ggccgcgttc accggttgct accggatttt
     3301 ttggatcgct gctccattcg taccagccgc cgtcatacac ggaaacattc ttccaaccca
     3361 tggcgcgtgc gtacataaag gtttcggacg cgcgccagcc ggtgccgcag tagaatgaaa
     3421 cttgctgctc tggtttgata ttccacgctt tccacatagc ggtaatatca tcggcgctgc
     3481 gcatggtgcc atccgggtta tgaaaatctt ccatatgcgt cgagtcgcta ccagcgtgtc
     3541 cccaacgtgc tccggctatt tcaccttttg gtttaatata gctgtaaccg ctggtcgtac
     3601 cgataaattc tggccacgaa cgaatgctca ccagcgatgc atcctggcga tgcagcagtc
     3661 cacgggcctg ttccatatcg agcatcaact gcggttgtgc cgggatcttc acgccgaaat
     3721 ccggttccgc tttcactttc ggtggcgttc ctcgctcaac aggcagtccc gcgtcggacc
     3781 aggtttgcca gccgccatcc agcagacgca catctttcac gcctgcgtag agcataattt
     3841 gcgccacacg cgctccagcg tatacgtcac gcccgtacag aatgaccgtg gtgtcatggc
     3901 gaatgccgtg ttttgccagc atcgctttta gttgttcatc agaaactttg ttccacagcg
     3961 gttcgctttc cacttcgttg gtatcgatgt agtcagcacc gggaatatgg ctgataaggt
     4021 aaagcttagg agcgccccag gccgcttcaa tgactttcca gtcaccggca ggtttcgccg
     4081 taacctcttt accttgttgc aggtcgtgca gccattgcgg ataaaccagc tgctcaaagt
     4141 gcggcagttt ttgtagacgg gaaggttcgc ttagcgcgtc actcagaatg gagatatgcg
     4201 taaaacctgc tttttgcagt cgcgttttga cggcgtcgac atctttgtca ttaccgtaca
     4261 gcgccaccgg ggcatcggct ttcaggttat gttgcttgat ccacgcgttg agctgttcgg
     4321 tgctcatttt gtcgagccag ctggcagaga ggtttaaggc ggcaggttca tgaccagaag
     4381 ggccatttaa ggtttgtggc cagccgttat aaaacgcgct ggggcgagta tctatcgctt
     4441 tgccattttg ttgttgaagc tggtcaagtg taagaggctt cgccagttca gcggcccacg
     4501 aagaagcgca agccagccct aaagccattg ccagcgcggt catttgagaa acacgtttca
     4561 tcgaaaatcc cgacattgta gttttgagtg cgccattctg aactgacgca ttgagaaaaa
     4621 ctttgcgtta tcgcagtttg ttgtaatttt ctgaccactg cgccatatcc agaacagaac
     4681 tatcagcagg aacatcctgg agatcgtgcg ttacctgaac gacggggatc gccagttcgc
     4741 gaacttcgct gaacacccac tggcgaaaat tatcgcgcag agccacatca agacggctga
     4801 atggctcatc caggagtaac gcttttggct gagcgagaag ggcgcgcagc agggccaccc
     4861 gcgctcgctg accgcctgat aatgtcgcag ggtcctggtg ataagtttca gccagtcccg
     4921 ctcgatcaag cgcgtctttc acggcattgc gcctggcagt ccccttgagc gtcgacggta
     4981 gcgccagcag taaattttgc ccgacgctga actggtcaaa taacagtgca tcctggaaaa
     5041 gaatgccaat ctgacgctgt gcggtgggta gcatgtcaat ccgttgctca ttgagccata
     5101 gctcacctgt acaagaaaac tgtccagcca gtgcaccaat catccatgaa aacagagtgg
     5161 attttccaca gccagacggc cccattaacg tgacgatgtc acctttatca accgtaaagt
     5221 taacgtttgt cagcaagcgg ctttctggta aacgtagcga aacatttttc acgcagagca
     5281 ttagcggagt ccttgtctga cataacctac ccattttgcg gctaacgcgg tcagggcaaa
     5341 aataataagc ggtaacaaca gttgccataa agcctgggcg gcgagaatac cgttgctgcc
     5401 gccgctgctt aatgccaccg cctcagtggt gagcgtcgga aaacgccccg cgcccagcca
     5461 cagcgtcggc atatactgcg caatactgac tgaaaatccc accgcgaagg caatcagcac
     5521 agggcgcaac atgagtgtgc atttcacgta aaagaagatt ttggcccgcg accagcccag
     5581 tgtttgcgca atcaaaatta accgtgaatc aatgcgctgc caggcgggtt gcaggataaa
     5641 cagcatccac ggcattaccc acagcagatg cccccagacc accgccgtcc agcttccatc
     5701 caggttcagc catagcgcca gcgtgtactg gcccgccacc agtggcagag cgggcaatag
     5761 aatgggcaac catagccaca actggcgacg ctgtggcccc cattccagcc acagcagtaa
     5821 caggagcaaa gcgatgaatg ttgctaccag ccccattgtc agactgttga tgagtgcttc
     5881 actattgatc gtcgactgat ccgcgaggat cgccagcaga accacacaca gcacaccggt
     5941 taagggtaaa aaactcgcca gcgtagtgcc tggtaataaa ggtgtggcag gcttgcgaat
     6001 gccatctacg cggggaatag tgcgccgcca gctgcgccat agcagatagc tcagcaaaac
     6061 gtaggcggcg agtaacagca tcagcagcag actggcgagt gcgcctttcg tttgttgatc
     6121 cgcgtcgccc tgagttaacc actgccagct aattactgcc agcgtcggtg gattacctgg
     6181 cccaagaata atcgccacat ccacgaccga aagcgaccag gcaacaatcg ccagcatcgc
     6241 cattgccagc gaaggcgcga cggagggcaa cagcagccag ttcaggcatt gccagcggct
     6301 gtagcccagc gaatccagca caatgacctg ctgcaacagc cgtttttcgc tcaatactgc
     6361 cgctaagatc cacagcagaa atgcgctttc tttcactgca agggtgaggc ccagaccgat
     6421 gccaaatcgg tccattggcg gagtgaaata cgggaaatag tcatatagca gccctccgtc
     6481 agcaaagagc agcagggcgc tggtggcaaa agccacatgg ggaatggcga gcagccacgg
     6541 cagacgggcg cacatacgct gccatttcgg cccaggccat agcgccacaa tcaccagcag
     6601 ggcaatcaac aatgccccga ccgccgcgat ggttgtcgac accagcgttg ccagtaatgc
     6661 atgcggtaac tgtggatcgg caaataacgc ctgccagtgt gtcaacgaca acgcaggcga
     6721 tatcagcgtg agagctgccg ggatcagcgg tgcataaatc accgccacca tcgcccacag
     6781 caaaaagatt aatgcgtacc gtaacggcgt aaccattctt gttccagtgc attcacccat
     6841 cctgcgtgcg gttcagccag taccggcggc agatcctgcg gcattcttga ttgcaatatt
     6901 tcgcgctgcc cgtcaggcag tttttgcgga tcgagaacag aaggatcgtc ccagacaacg
     6961 ggatctgctt tacgcagttg cgcatcgggt gagagcagaa aattggcaac taccttcgcc
     7021 gcagcactgg cattcgcgtt ggctggaatg gtgacgaaat gcacgttgcc aatcatcccc
     7081 tcgcgaaagc caaaactgta actgcttgcc ggcaaatcgc cgctggcgat tttttgctgc
     7141 gcatgcgcgg ggttaaaggt cagcgacagg cgcaatgtgc cggctttcag cagagcatcc
     7201 atccgcgcgg gcgaaggcgg gaaatccttt ccttcgcgcc acaaatacgg atgcagtgca
     7261 tcaagatatt gccacaaggg cgcagtgaca cgggcgaaag tcgcatcgtc cggcgcttct
     7321 tttaatgcgg cgggatctgg cgtcagcata atcagcaact gttcaagaaa cgccgtgccg
     7381 gtaaagtccg gtgggcgcgg ataagtaacc gtgccgggat tggctttagc aaactccagt
     7441 aaggcttgcg gcgtttgtgg tggctgtggc gtaacatcgc ggcgggcgat aaacgtcagt
     7501 tgtgcgccgc cccagggcga ttccgcacct tgtgtcggca ctgaaaaatc ttcccgcacc
     7561 ggcagctgtg tgtcgacata gcgccagttg ggcagagtct ccgcccagcc cgtttgtaat
     7621 aaattggcct cttttaaggt gcggaagttt tcgccgttca cccagagcag atccaccgag
     7681 ccgcccgttt tacgaccggc agcagcttcg gtctgaatgc gcttcaccgc gtctgcggca
     7741 tccgcgagac gaacaatctt caggtttata gcgtaatggg ttttcatctc gccgctaacc
     7801 cagtcgagat agcggttaat tgcggtatcg ccgccccagg cgttaaacca gacggtttgc
     7861 cctttggcct catttttaat ttcctgccag tcactggcat gtgttgccaa agaaaacagc
     7921 gataacaatc ccagcaacca cccacaatgg cgcatcttct ctccttaaga acgtttttcc
     7981 ggaatacggc acagcccctg agcgggaatg tccatggcag aattaaaacg agccgacagg
     8041 ttttgcaggc cgatcaatgc cgtcagttcg gtgagcgcct gagcgtcaaa atgcgcagcc
     8101 agtcgggtac gcagggcatc atcgactgtt ggcggtgtga cgcttgcggc ttcggcgtac
     8161 tccagcgcca gccgttcttc atcgctaaag agcgggcttt gccgccagtc agccactgcc
     8221 agcagtttat cggtgctgcc ggtacgctcg gcgactttca tactggtgat atccacacaa
     8281 aactcacaca ggcacatttg cgcaatgcgc gcgctgacaa gcgatcgcac taccggatcg
     8341 agcggtgagc gtttgcgctc cagccaccca acaaacattg acaccaaata aaagataaac
     8401 gggatccgcc cccaccagcg aatcgggctt agcacctcgc cgtaatggcg acgatgcagc
     8461 cacgcctgcg gacgtaaaat gaaaggaatt ttgctaagcg gcggtaaacc catcagtcat
     8521 tcctcttctg gcgctcaagc catattttct tcgccataaa aatcaccacg gtcagggcaa
     8581 acagaataaa cagtccggtg acaaaccaga aagtaccgcc tgttaacatg ctgcccgccc
     8641 aggaataaac aatagtcgcc ggtaattgac caagcccggt ggcgataaaa aacgagcgaa
     8701 aacgtattga agtcagaccg gcagcatagc tgattggatc gaaagggaca aaaggcaata
     8761 accgacagac caggatggtg tgtttgccgt agcgagtgaa aaagccgtcc atactgtcaa
     8821 gcacggtttt gccggttaat ttttccacca cttcgcggcc catcactctg gcgataaaaa
     8881 agcacagcgc cgcgccggcc atcgaactgg tccacgacag caagccgccc cagaacgcgc
     8941 caaacagcga cgcattggca aaggtgatca aaaacgcagg tagcggtgca gcaatggcct
     9001 gtaaaatcat caacaagaac gagacaactg ccgccagtgc gccgtaagac tgaataaagc
     9061 gttctatacc ctgttggtcc acggcggcaa acgccgcaac gctgcgattg ataaactcat
     9121 ggacgccggg aagcagcgcc catgcgagca gcatagcgaa caacaggatg atgagggtta
     9181 tacagtagta ccagatttta cgcgattgca tcttcatcat cctttatcct ggctttattc
     9241 ggtgatttta aaggtaaccg ttgccagcgt gttatccgcc gggagaactg aggcattgcc
     9301 tttgaatttc acttcgccgc gtttttccac cgcaccataa gtgtatgttg cattgctgac
     9361 gatgccgacc gggcagctat ccagacacac cagtcaaccc gttttcttct cttctgctgc
     9421 cgttaaatta ccgccaaagc gcatgtccag tttcttgcca ttactgtcaa caatcacttc
     9481 atcgaaggaa tacgcttttg ccgccccttg ccagttgacc gaaatatcca gtttgctgcc
     9541 tgtgacatga gtcgtttctt tattatccat cgtcatgttt tcgcccggcg taccacctgc
     9601 ctctttcagg gcttcataaa atgctttcgg ggtcgcataa gccataaaca gcgatttatg
     9661 tccgttggag ccatctttaa acacaatacc gtgacgagtg tcgtcggtga ggaaacgacc
     9721 attaatttgc accagcatgg ttaccgtatg gttattggca tcgacgcgca gcggttggct
     9781 gttcgaaagt ccgtcgtatt ccacttttgc cgccgaattc tctttttgat cgcagccgct
     9841 aagcccggca acagccagta agcagagtgc agccagtcct tttttccatg acactgaata
     9901 atgttgcgac atcgttctat ccttcatttt ttgggtgagt aagcgggctg cggcgcgaag
     9961 cagacagatc cacatgtttg tgtcgggcgt agagttttgc gagctggacg agaataaaca
    10021 gcgccaggcc cgccagacag agttgtaaaa taaagcgc
//
LOCUS       DADKRT010000161        10004 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.164, whole genome shotgun sequence.
ACCESSION   DADKRT010000161 DADKRT010000000
VERSION     DADKRT010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10004
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.164"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(272..1636)
                     /gene="tdcG"
                     /locus_tag="JQ356_003360"
     CDS             complement(272..1636)
                     /gene="tdcG"
                     /locus_tag="JQ356_003360"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HAY4623351.1"
                     /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH
                     IVVDLYGALSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA
                     HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLS
                     HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD
                     GIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG
                     AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC
                     IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
                     VVCG"
     gene            complement(1708..2097)
                     /locus_tag="JQ356_003361"
     CDS             complement(1708..2097)
                     /locus_tag="JQ356_003361"
                     /EC_number="3.5.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enamine/imine deaminase"
                     /protein_id="HAY4623352.1"
                     /translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA
                     DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY
                     PTRSCVQVARLPKDVKLEIEAIAVRSA"
     gene            complement(2111..4405)
                     /gene="tdcE"
                     /locus_tag="JQ356_003362"
     CDS             complement(2111..4405)
                     /gene="tdcE"
                     /locus_tag="JQ356_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-ketobutyrate formate-lyase/pyruvate
                     formate-lyase"
                     /protein_id="HAY4623353.1"
                     /translation="MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGD
                     ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV
                     GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD
                     MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL
                     EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG
                     GAMSLGRTASFLDIYIERDFEAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
                     DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA
                     AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
                     INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK
                     YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG
                     EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT
                     PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
                     DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNIMNREMLLDAIEHPEKYPNLTIRVSGY
                     AVRFNALTREQQQDVISRTFTQAL"
     gene            complement(4439..5647)
                     /gene="tdcD"
                     /locus_tag="JQ356_003363"
     CDS             complement(4439..5647)
                     /gene="tdcD"
                     /locus_tag="JQ356_003363"
                     /EC_number="2.7.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate kinase"
                     /protein_id="HAY4623354.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
                     LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD
                     EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
                     WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS
                     SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI
                     RRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHL
                     GKVNAPAEFA"
     gene            complement(5673..7004)
                     /gene="tdcC"
                     /locus_tag="JQ356_003364"
     CDS             complement(5673..7004)
                     /gene="tdcC"
                     /locus_tag="JQ356_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
                     /protein_id="HAY4623355.1"
                     /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
                     GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
                     LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
                     VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
                     VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
                     TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
                     YLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM
                     GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
     gene            complement(7026..8015)
                     /gene="tdcB"
                     /locus_tag="JQ356_003365"
     CDS             complement(7026..8015)
                     /gene="tdcB"
                     /locus_tag="JQ356_003365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HAY4623356.1"
                     /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
                     SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
     gene            complement(8114..9052)
                     /gene="tdcA"
                     /locus_tag="JQ356_003366"
     CDS             complement(8114..9052)
                     /gene="tdcA"
                     /locus_tag="JQ356_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HAY4623357.1"
                     /translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
                     IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
                     FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKL
                     QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
                     WSKNYRIKKAASVLVELAKEYSSYNGCRRRLLIEVG"
     gene            9241..9585
                     /gene="tdcR"
                     /locus_tag="JQ356_003367"
     CDS             9241..9585
                     /gene="tdcR"
                     /locus_tag="JQ356_003367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TdcR"
                     /protein_id="HAY4623358.1"
                     /translation="MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMS
                     KFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
                     DRTSFCECNRFP"
BASE COUNT         2695 a         2516 c         2274 g         2519 t
ORIGIN      
        1 tttctcgctc aatattttgt agggcttatt atttttttcc gagccgcatc aaggcgatat
       61 gcggtctacg tttttgcagg cgagttatta gaataaagaa atgatacgcg cgaggtcaga
      121 gaaaatgttc acaatcaaga ctttgaaata acggagatgg ataagaattt tctactaaat
      181 taatcgcaag agaatattca ttctctattt gcggcagatc acaaaaaaag gtgcacattt
      241 gtgcacccaa ggatgaaagc tgacagcaat gtcagccgca gaccacttta atggccagtc
      301 ctccgcgtga tgtttcgcgg tatttatcgt tcatatcttt gccggtttca tacatcgtct
      361 cgatcacttt atcgagtgaa acacgcggtg ccgaggtgcg gcgcatcgcc atccgcgcgg
      421 cgtttactgc tttcacggca ttaatggcat tacgttcaat gcacgggatt tgtacctgtc
      481 cggcaaccgg atcgcaggtc agcccaaggt tatgctccat cgcgatttcc gccgcattgc
      541 atacctgcgc cggactgccg cccagtagtt cagttaaccc tgccgccgcc attgaacagg
      601 ccacgccaat ctccccctga cagccgacct ccgcgccaga gatggaggcg ttcattttat
      661 acagcgcgcc aatagccccc gctgccagaa aatagcgggc aattgaccgc tcgtttaccg
      721 gacgacggaa cttatcgtaa taagccagca ctgccggaat aatgccgcac gcaccgttag
      781 tcggtgccgt taccacgcgc ccgccagctg cgttttcttc actaaccgcc agcgcgtaca
      841 tgttgatcca gtcgatgaca ttcatcggat cgttagagat gttatcgcta gaaaccagct
      901 gacgacgcag cgctacggca cgacgcggca cattgagcgg accaggcagc acgccttcag
      961 tgttcatccc gcgttcaata ccgtcatgca tcacttgcca gatacgggca aaccctgcgt
     1021 caatttccgc tttgctgcgc agcgccagct cgttgtgcat catcaggcca gatatagaca
     1081 ggccgttgta atcacacatt ttcagcagtt cacctgctga gtggaaatcg taaggtacgg
     1141 acgtttcgac atcgtgcgac aggccgaagt gttcttcttc gacaataaac ccgccgccga
     1201 cagagtaata ggttttactt aatagcgctt cctgtccctt ccaggcagtg atccgcattc
     1261 cgttctcatg gcgaggcaac atttcgggat ggaagataat gttctttgct acaggaaaat
     1321 caacaatatg cgcaccagat gccactggca gccgcccgct gcgcgttact aactctataa
     1381 atgcagggat ctcatcaatg acaacatcct gcggactgtt tcctgccagt cccatgataa
     1441 tggcgacatc cgtggcatgg cctttgcccg tcagtgacaa cgccccatac agatcgacca
     1501 caatatggct cgtcgcggtt aataagccgc tactttccag ccgatcaata aaactttttc
     1561 cggcattcat tggccccacg gtatgcgaac tggagggacc aatcccaatt ttgaaaatat
     1621 cgaatgcact aatcatatcc acaccctcgg attgccgttc agtgaagtgg agcggaacga
     1681 ccttgcgacc gtcccgctca cgaggcttta cgcactacgt actgcgatag cttcaatttc
     1741 cagcttcaca tctttcggca aacgcgcaac ctgcacacag ctccgggtcg ggtaggtcgc
     1801 ctgatgctca tcgaagaact gcttatagac ttcattgatg gtggcaaaat cattcagatc
     1861 ggtgatgaac acggtcatct tgatgatatc gcccacgctc agcccggcag caaccacgat
     1921 cgctttgacg ttttcgaggc ttaaacgcgc ctgatcttgc acatcagccg ggatctcacc
     1981 ggtctgcggg caaaccggaa tttgcccgga ggtgaagacc atgctgccta aatcaacgcc
     2041 ctgaacataa gggccgattg cgcctggggc acgttgcgtt tcgataatct ttttcataca
     2101 tcctccggcg tcagagcgcc tgggtaaaag tacgtgaaat aacatcctgt tgctgttcac
     2161 gggtcagtgc gttgaagcgc acggcgtagc cagagacacg gattgtcagg ttaggatatt
     2221 tttccgggtg ctcgatggca tccagcagca tttcccgatt cattatgttg acgttgaggt
     2281 gttgaccgcc ttcgacatcc gcttcgtggt ggaaataccc atccagcagg ccgacaaggt
     2341 tagttttacg tactggatct tctttgccca gcgccgcagg aacgattgag aaggtgtacg
     2401 agatcccatc tttggcgtag gtgaacggca gtttcgccac cgacgtcaat gaggccacgg
     2461 cacctttgcg gtcacgacca tgcatcgggt tagcgcccgg cgcgaacggt gttccggcgc
     2521 gacgaccgtc cggcgtatta ccggttttct ggccgtacac cacgttagaa gtgatagtca
     2581 gaatcgactg ggtagggacg gcgttgcgat aggttggcag cgctttaatt ttcttcataa
     2641 agcgttcaac caggtcgcag gcaatgctgt ctacgcgctc gtcgttgttg ccgtactgcg
     2701 gatattcacc gtcgatttca aagtccaccg ccaggccgtt ttcgtcacgg attggtttca
     2761 cgcgggcata tttgatggca gacagggagt ccgtcgccac cgacaggccc gcgatgccgc
     2821 atgccatagt gcgatagaca tcacgatcgt gcagcgccat cagcgaagct tcgtagctgt
     2881 acttgtcgtg catgtagtga atgatattca gcgcgctgat gtactgcacc gccagccagt
     2941 ccatgaagtg atcgaggctg tccatcactt tgtcgtaatc cagcacgtcg tccatcagcg
     3001 gtgctgtttt cggcccgacc tgaatcttca gcttctcgtc caccccgccg ttaattgcgt
     3061 agagcagcgt tttcgccagg ttagcgcgtg caccaaagaa ctgcatttgc ttaccaatca
     3121 ccattgggct gacgcagcag gcaatcgcgt aatcgtcgct gttgaagtca gtacgcatca
     3181 gatcgtcatt ttcatactgc aaggaagagg tgacgatcga cacctgcgcg gcatattttt
     3241 tgaaggcaat cggtaattct tccgaccaaa gaatggtcag gttaggttcc ggtgccggcc
     3301 ccatagtgtg cagggtgtgc aaatagcgga aggagttttt ggtcaccagc gtacgaccgt
     3361 ccagccccat cccgccgatc acttccgtcg cccagattgg gtcgccggag aacagcgaat
     3421 caaattccgg tgtacgcagg aagcgtacca tacggatctt catgatgaag tgatcgatca
     3481 gttcctgtgc ctgctgctca ttgagtacgc cagcttcaaa gtcgcgctca atgtagatat
     3541 cgaggaacga tgccgtgcgg cccagcgaca tcgcgccgcc attttgcgat ttcactgccg
     3601 ccagataagc gaagtagagc cactgcaccg cttcttgcgc attctgcgcc gggcgagaga
     3661 tatcaaagcc atatttcgcc gccatttcct gaatctgcaa cagcgcatga cgatgctctg
     3721 ccagctcctc acgcagacgg atggtggctt ccagatcctc gcctttttcc agacgagact
     3781 ggagatcggc aaattgcagt tcgcgttcac gtaccagata actgatgcca tacagcgcta
     3841 cgcggcgata gtcaccgata atgcgcccac ggccatagcc atctggtaaa ccggtcagca
     3901 cgccagattt acggcagcgc agcatatccg gtgagtaaac atcaaatacg ccctggttat
     3961 gggttttacg cagatcggta aacagatatt caaattcact gtccatttca cggccatagg
     4021 cgtggaatga acttttaatc atattaatgc caccgaacgg gtgtagcgca cgtttcaacg
     4081 gcgcatccgt ttgcaggcca acaatttttt ccagcggctg gttaatatat cccgcatcat
     4141 gagcggtaat tgtggtggca atattggtat cgaaatcaac cggcgcgtgg gttgcgtttt
     4201 cgatacggat accttccatt actttttccc acaattccgt ggtggcaggc gtcgcttcgg
     4261 cgaggaaaga ttcatcgcct tcatacggtg tatagttatg ttgaataaaa tcgcggacat
     4321 taatttcgtt tttccagtcc gtacctttaa agccaagcca tgcgtcggcg tacagcttat
     4381 cgctggtatc aatatctacc ttcatgaaaa ataatctctc tacaatactt caactaaatt
     4441 atgcaaattc tgcgggcgcg ttaactttgc ctaaatgaat ggcatccaaa gcaatcattt
     4501 tttcttcgtt agtcggaata acagcgcaaa tgacacgcgc attttcactg gaaacaattc
     4561 gctcaccaca ggagttagag cgattattca tttctgtatc aatctctacg cctaatacag
     4621 ccaaatgttc catgaccaga cgacgaatta agcttgaatt ctctcctatt ccgccggtga
     4681 atataattcc atccaggcga cgtaatgaag ctgcgtgtcc ggcaatatga cgggcaattc
     4741 ggtgaacaaa ggttttaatt gccagttgcg cgcgttcgtg accttcatgc caggcttttt
     4801 ccagaacacg taaatccgaa gaaagaccgg aaatacctaa taatcccgac tctttattca
     4861 ctacgcgttc caagtcaccc aagctctggt tggtttggct ggcgacccag gacatcgcac
     4921 caaaatcgac atcgccactg cgggtaccca tcatcaagcc ttccagcggc gtcattccca
     4981 ttgaggtgtc aacactctga ccgttgcgaa ctgcgcagat tgacgcgcca ttgccaagat
     5041 gcgccacaac caggccggag tcatcttccg ctagattcag caaagaatgt gcgcgctggg
     5101 aaacatagcg gtgcgacgtg ccgtggaaac cataacggcg tacacctaac tcttcataat
     5161 atttccacgg caggccgtat aaataagctt ccggagccat cgtctggtgg aaactggtat
     5221 caaataccgc cacctgagtt acgcccggaa ataattgctg cgccgattca ataccactta
     5281 aattggcgta attatgcagg ggtgccagtg gagaaacgcg acggatatta tcaatgacct
     5341 catcggtaat aatggcggac tcggtaaaaa tactgccgcc gtgagcgatg cggtggccaa
     5401 ttaaggccac actgtcattt aaattccgtt tttccagttc aaatgcaatt gccttcaatg
     5461 caccttcgta gctgtggtga gccagcggtg ctggctctcc cccatttacg gataagaatg
     5521 cattttctga gttaataccg tcggcaatac ctgacattaa tacttcacag tcgctggcat
     5581 cgagtacgga aaacttaatc gaagacgaac cacagttaat aaccaaaaca accggaaatt
     5641 cattcatctc ttttctcatc ctgagttacg gattaaaaca gtttgtatac gatgttcagg
     5701 atggtcagca gaccaatcac ggtaacaaac acgttatcca gacgaccacg gtatttcgcc
     5761 agagacggtg ctttacggat ggcatacatc ggcaacaggc acagcaggga tgcgataatc
     5821 ggtgcgccca tggcttcaat aaggtcgagg atgttcgggt tggcgtaggc aacaacccag
     5881 gtggagccca tgatgaagat catgctgata gtgttcagtt tacccagcga cactttagtt
     5941 ttgtcgcctt tataaccgaa cttcagaatc agaccattca agccttccag cgtccccaga
     6001 tagtgaccga agaaagattt gaagatagcc acgagtgcga tgatggaagc cgcatattcc
     6061 agtgtaatcg cgaacgttgt tttggtaccg gtcatggacg caaagtggtt agccagataa
     6121 gaaagcactg gaatattctg cgctttggct tccgccatgt tggccggaga cagcgtaaac
     6181 aggcagctaa aggcaaagaa catcaccact gcaaccatca gcatgctggc acgagaaatg
     6241 atttgggaac atttacgttc ggtgaagtcg cgaccgaagt ctttctcata ctcttcacgt
     6301 ttagaaacca cgaaggaaga gacgattggc gagaagttaa aggagaaaac catgatggaa
     6361 atccccagcc agacagtgat caggataccg tcatgaccgg ttaacgacag cgaaccgagg
     6421 tcaacctggt cgataactgc agagttccag taagggatca gcgacagaga aatcagcacc
     6481 aggctggcga taaacggcca taccaggtag ctcatcactt taaccatcag atccttacca
     6541 aaccagatga cgaaagccat cagcagcaac aggaacagcg ccacaaagcc gcgattcagc
     6601 ggtgcaaatc cgagctggtt ttcccagaac gtcataaagg tattggtaat agtaacgcca
     6661 taaatccaca gcagtgggca aatcgcgaag aagtacagga acgtgataac cacgccgcca
     6721 gttttaccaa aatgctcttc caccgtttcc gtaatgttgc cggaagggtt agagccagaa
     6781 agacacagac gcgccagcgc ccggtggcaa taaaatgcga tggggtatgc caataccaac
     6841 atcagaagaa tcgggatcag tccgccaaaa cctgcgcgga tagggaagaa cagcaccccg
     6901 gcgccgattg ccgtaccaaa caagcctaac gtccatgtgg tatctgattt acgccaggac
     6961 gattgttttg tctggctgga tacaatgcta tctgaagtac tcatatccta tcctcaacga
     7021 attaattaag cgtcaacgaa accggtgatt tgagagacgc gagaaagatc gatattgccg
     7081 ccggaaataa tactgacggt ttttctgttt tgaatatatt ggtctaattt accgcttaat
     7141 aatgcagcac atgccagagc acctgcgcct tcggtgacga ctttattgcg ctgaattaag
     7201 gcaatcatac tgtttctgat ttcgtcttcg ctgaccagca cgatgtcatc gactaattca
     7261 cgaacgattt cgtaagttaa attacccggg cgggagacat cacaaccatc cgccagggtg
     7321 ccggtagttc ggtgcgtggt tatttctccg gagtggaaag aagccgccat gccgtgaacg
     7381 ttttctgact gtacgccaat aacacgaatg gtcgggttaa tagatttaat tgccaccgca
     7441 ataccagcaa ttaaaccacc accaccaatt ggcacaatca cgttatcgac atcatagaga
     7501 tcttccataa tttccagacc aatcgttccc tggccagcaa tcactttcgg atcatcgtaa
     7561 ggtgggataa aaatacgacc ttccatttcg acaatttcgc tcactttagc gatagtgtcg
     7621 ttgaagttat caccatgcag aacgacttct gcggagtagt cgcacgttgc cgctactttg
     7681 gattttggcg caccttttgg catcaccact ttaccgtcga tacccagcat cgcgcaggag
     7741 agcgaaaccc cttgcgcatg gttgcccgca gaacaggcca ccacgccttt gcgtttttcc
     7801 gcatcggtca gtgaacttaa tttattaaat gcgccacgaa ttttaaatga acccgtacgc
     7861 tgcatatttt caaacttcag gaatatttca cctttgcaac gttcactaaa atagttggag
     7921 cgaggcatgc ctgttttata aattcgccca gccagtcgtt gtttcgcttc aataatatca
     7981 tcaatagcaa ccggcagatc gtatgtaata tgcattataa aacctcttcg cctgaattaa
     8041 atatgtagat aaccgtaacc gacacctgca aaacagacag gtggattatt tatgtttaaa
     8101 taaaaacaaa taactaacca acttctatta atagccttcg tctacaccca ttataagatg
     8161 aatactcttt ggctaattcc accaaaaccg atgctgcttt tttaatacga taatttttcg
     8221 accataccgc ggcatattgt gccacaggta atgtttcttc aactggaata gtaataaatt
     8281 gatttgaacc aaaaggtgac gtcatatcac aaggaattac agttaagaaa tcagcattga
     8341 gaacaagatt ataaattgtc acgactgagt cggttttaac gatgttttca atactgatgc
     8401 catttctttg taacgtagta agaagctcgc tgtagtaccc catattggtt tgtggcaaca
     8461 cccactgttc gttcttcaac gactccagcg tggtggtgcc ggtgcatgtt cgggacttac
     8521 tggctaccag cacaaactcg gactcgaaca gcggctcaac atgtaaatcc tgaagcttca
     8581 tttctgcact taacgtacca atcgcaaaat ccagtcgacc gtcgcggatt gccggtaaga
     8641 acgaagacag ttgcgcttca tacatagaaa cctgcgcttt cgggaacacc tctttgaact
     8701 tgttgatcat ccctgacata aaagtaaaac caatcaatga aggaaaacca aatgagactt
     8761 ccaccaccgc ctcagaagac ataccgctta tctcattaac catatttttc atttcacggg
     8821 taatggattc ggaacgggag agtaacaatt gaccggcagg tgttaatgtt acaccggtat
     8881 ttttccgcac cactaattcc acaccaaaat aatcttcaat atcgttaatg attttactga
     8941 cggccggttg agttaaccct aattcttttg cagccgagcc gatagagcca cttctaatga
     9001 cttcctgaaa gactaccagg tgctgcgttt tcggaagaag aatagtgctc ataacgacct
     9061 acgttaatta cctcattgac ggcatgaagt gtatcaaaat gaaatgaaca ggatatgtgc
     9121 gaccactcac aaattaactt tcattacttt ccagggtatc gttattacaa ttaaatatct
     9181 ttaaatatca acaagttaaa acataaaaat cagcataaac cctgattttt atcaaaaaaa
     9241 atgacgggga taaccatatt ttatggcgat aacatcattc gttatgtggt taatacaaaa
     9301 aaggggctga gaccatattt caagcaatta ccggataatt accaggcaaa atttgagtta
     9361 aatttaatga gcaagttctc aaattttatt ataaataaac cattttcagc gataaatact
     9421 gcggcacgtc acattttttc acgctatttg ttggagaaca aacatttatt ttatcaatat
     9481 tttaaaattt cgaatacagg tattgatcat ctcgaacaat tgattaacgt caactttttc
     9541 tcttctgaca ggacgtcatt ttgtgaatgc aatcgttttc cataaattct tctcccctca
     9601 taggcgacga atagcatttt gtgttgagga tcacaaaaca aataattgct ggtcgccgcg
     9661 ataaggtcag acgaagtcaa caaggggaat tttcactgtg ctttacatca gcgtaggaca
     9721 cagaatgttg cttcgtttac tgtaacgccg ggtaaatgag cgttttttga tagtgcgtaa
     9781 gtgtcgtgcg aggaaaataa gcatctatta ttgtttgtca tgacgacaag gcaggcatca
     9841 atgaaaggct tcccaattgc acatattttt cacccttcaa tcccgccaat gcacgcagtg
     9901 gttaacaatc acaatagaaa tattgattat tggacggtaa aaagaaagtt tgcagaaatt
     9961 gtctccacca atgacgttaa aaaaatttac agtataagta atga
//
LOCUS       DADKRT010000162         9955 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.165, whole genome shotgun sequence.
ACCESSION   DADKRT010000162 DADKRT010000000
VERSION     DADKRT010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9955
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.165"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            259..456
                     /locus_tag="JQ356_003368"
     CDS             259..456
                     /locus_tag="JQ356_003368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623359.1"
                     /translation="MEITPQQLVEFTIPDGRGQQARTLPDMLSSDAGPLSYPLIYSSK
                     VMIISLFDSTVMPDKYRHNGK"
     gene            complement(406..1599)
                     /locus_tag="JQ356_003369"
     CDS             complement(406..1599)
                     /locus_tag="JQ356_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4623360.1"
                     /translation="MSPGIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTN
                     LSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPVVLWALGGYGISFTLLGLGSVLM
                     ATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSC
                     GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGTPPQPTPECKSVSLKRDC
                     LPYLLCAILLAAAVSMMQLGLSPALTRQFVTDTTAISQQVAWLLGLSAVAALIAQFGV
                     VRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFGAALATPAYQLLLND
                     KLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWH
                     YRTIK"
     gene            1735..3459
                     /gene="iucA"
                     /locus_tag="JQ356_003370"
     CDS             1735..3459
                     /gene="iucA"
                     /locus_tag="JQ356_003370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucA"
                     /protein_id="HAY4623361.1"
                     /translation="MTLPSEKPATDVAAQCFLNALIRETTDWKLTEYPPDELLIPLDE
                     QKSLHFRVAYFSPTQHHRFAFPARLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLC
                     ETFHQRVLESHVHTQQAIDARHDWAALREKALNFGEAEQALLTGHAFHPAPKSHEPFN
                     RREAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDN
                     QWLFPLHPWQGEYLLQQGWCQALVAKGLIKDLGEAGTSWLPTTSSRSLYCATSRDMIK
                     FSLSVRLTNSIRTLSVKEVKRGMRLARLAQTDGWQMLQVRFPTFRVMQEDGWAGLLDL
                     NGNIMQESLFALRENLLVDQPKSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITV
                     QQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSA
                     FMPHATDWLDSIGEAQAENIFTHEQLLRYFPYYLLVNSTFAVTAALGAAGLDSESNLM
                     ARVRASLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFA
                     NPLQAQEV"
     gene            3460..4407
                     /gene="iucB"
                     /locus_tag="JQ356_003371"
     CDS             3460..4407
                     /gene="iucB"
                     /locus_tag="JQ356_003371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(6)-hydroxylysine O-acetyltransferase"
                     /protein_id="HAY4623362.1"
                     /translation="MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGW
                     LCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSP
                     ANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW
                     MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
                     RHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQR
                     LFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL"
     gene            4407..6149
                     /gene="iucC"
                     /locus_tag="JQ356_003372"
     CDS             4407..6149
                     /gene="iucC"
                     /locus_tag="JQ356_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucC"
                     /protein_id="HAY4623363.1"
                     /translation="MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGA
                     QWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
                     LLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
                     TNTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPL
                     PVHPWQWQQKIATDFIADFVEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPL
                     TIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYA
                     ALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLD
                     AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLV
                     KEAFPEMDSLPQEVRDATSRLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQ
                     LLAAVLSDYMNKHPQMAERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEN
                     LQNPLWLVTQEYES"
     gene            6146..7483
                     /gene="iucD"
                     /locus_tag="JQ356_003373"
     CDS             6146..7483
                     /gene="iucD"
                     /locus_tag="JQ356_003373"
                     /EC_number="1.14.13.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent L-lysine N(6)-monooxygenase"
                     /protein_id="HAY4623364.1"
                     /translation="MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHP
                     GMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDY
                     LRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFARNICLGTGKQPYLPPCVK
                     HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRN
                     NFNALDEAAFADEYFTPEYISGFSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELY
                     HRFEVLRKPRNIRLLPSRSVITLESSGPGWRLLMEHHLDQGRESLESDVVIFATGYRS
                     ALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSL
                     MAWRSARILNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAASLTHYTANIQE"
     gene            7489..9684
                     /gene="iutA"
                     /locus_tag="JQ356_003374"
     CDS             7489..9684
                     /gene="iutA"
                     /locus_tag="JQ356_003374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric aerobactin receptor IutA"
                     /protein_id="HAY4623365.1"
                     /translation="MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAE
                     MAQTTWIIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLID
                     GVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME
                     FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQ
                     TGLQHSNRLDIMGTGTLNIDESRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPY
                     VSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLRYYPFPTVNANKQAT
                     AFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLN
                     NHKIYTTGRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQK
                     IAAGKAISADAIPGGSVDYDNFLFNAGLLMHITERQQAWFNFSQGVALPDPGKYYGRG
                     IYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYSLSNKSVE
                     RNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKE
                     SSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSF
                     SVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
BASE COUNT         2396 a         2564 c         2644 g         2351 t
ORIGIN      
        1 cataaaaaac atgtcagtga aaaagaaacc tggcgttggg ttgaaggata taataaagca
       61 acagaactgg ctcgccaatg ccctgatacc catgtattgt caatttctga tcgtgaaggc
      121 gatttttatg acctgtttga acgcgcagag cagactcccg gaataaaagc tgactggctt
      181 gtcagaatga aatttaataa cagagcaacg ctgaatatta atggtaaacg ggatcatagg
      241 ttgttgcacg aaagaatcat ggagattaca ccgcagcaac tggttgaatt cactatacct
      301 gatgggcggg ggcagcaagc cagaacactg cctgacatgc tttcatcaga cgcaggtcct
      361 ctctcatatc ctctgattta ctccagtaag gtgatgatca tatctttatt tgatagtacg
      421 gtaatgccag ataaatacag acacaatggt aaataatata gttgcaaata atgctgccat
      481 aatcagcgcg attgcgacac ctgttttcga taccagcggc accagcaaag cgcacagtcc
      541 atagccaagt gtgtgactgg tagcgagcca gcccgcgcct gcgccatcag ccagcttatc
      601 attcagtaga agttgataag cgggtgttgc cagagctgct ccaaatgaca gcactgcaca
      661 gcccgggtaa aacaaccata gctgttcgga gagcatgata gccagaccac cactcatcaa
      721 cactccggca ctcaggagca gggccaccgg agtcaggcgc tgcggacgga ctaccccgaa
      781 ctgcgcgata agcgcagcta ctgcggacag acccaacagc caggccacct gttggctaat
      841 ggcggtggta tccgtgacga actggcgagt aagggcaggc gaaagtccaa gctgcatcat
      901 gctcaccgcc gcagccagta atattgcgca aagcagataa ggcagacaat cccgcttcag
      961 actgacgctc ttgcactccg gtgtgggctg tggtggtgtg ccgggcaacc gcagcagcat
     1021 cagcagcgcc agcactggtg ctgccatcag tagccccagt ggcgccagag gatgaatggc
     1081 cagcattgct gccgcgcaca gcggcccgaa tagcctgccg caactcaggc cggagctgat
     1141 ggttgccaga gcggccatgc gattcccttc tccagctctc tgcaatgccc agacctgaca
     1201 ggctggcacc attgccgaca cggtcagccc gtaggcgatc cgggcgatga ttaatattcc
     1261 cagtcccacc gctgttgtta tggcgctggt agccatcagc acgcttccca gccctagcag
     1321 ggtaaagctt atgccatatc ctcccagagc ccacaacacc acaggtttac tgccagtacg
     1381 ggaaatttgc tttccccacc acggggacga tggcagaaac agcattgagc caagcatcag
     1441 cagggcagcc catacagaca gactcagatt tgtctgtatg accagaacag ggagcacaac
     1501 cagcagaccg ttctgtccga taccgagaag cccggcactg aacgcaagtg gccagcagga
     1561 cagtgttttt tggggcgtat cttcgatccc tggtgacatt ataatgcttc aactccatgt
     1621 attaattgtg tttatttgta aaattaattt atctgacaat aacatttatt gttgataatg
     1681 agaatcatta tcgacataat tgttattatt ttactgtgtg ggagctgttt gactatgacc
     1741 ctgccctctg aaaaaccagc cacagatgtg gctgcgcagt gcttcctgaa tgcactgatt
     1801 cgtgaaacca cagactggaa actgacagaa tacccgccag acgaattgct catcccgctg
     1861 gatgagcaga aatcgctcca tttcagagtg gcttatttct ccccaaccca gcatcaccgc
     1921 tttgcatttc ctgcacgtct ggtcacggca tcaggcagtt atcctgtcga ctttaccact
     1981 ctctcccggc ttattattga taagctacgc catcaactgt ttctgcccgt tcccctctgc
     2041 gaaactttcc accagcgcgt gctggaaagc catgtccata cgcaacaggc aattgatgcc
     2101 cgtcatgact gggccgctct gcgtgaaaaa gcgttgaatt ttggcgaggc tgagcaggcg
     2161 ctgctgacag gacacgcttt ccaccctgcg cctaagtctc atgaaccgtt taaccggcgg
     2221 gaggctgaac gctacctgcc tgatatggca ccccacttcc cactgcggtg gttttcggtg
     2281 gataaaacgc aaatcgccgg tgaaagtttg catctcaacc ttcaacagcg gctgacgcga
     2341 tttgccgcag agaatgcgcc tcagttactc aacgaattaa gtgacaacca atggctgttc
     2401 ccgttgcacc cgtggcaggg ggaatatctt ttgcagcagg ggtggtgcca ggcacttgtt
     2461 gctaaagggc tgattaaaga cttaggtgag gccggcacgt cgtggctgcc gaccacctct
     2521 tcccgttccc tctactgtgc caccagccgc gatatgatca agttctccct gagcgtacgg
     2581 ctgaccaact ccatccgtac tctgtccgtg aaagaagtga agcgtgggat gcgcctggca
     2641 cgcctggctc aaaccgacgg ctggcagatg ctacaggtcc gcttcccgac tttccgggta
     2701 atgcaggagg atggctgggc cgggctgctc gatcttaacg gcaacatcat gcaggaaagt
     2761 ctgtttgccc tgcgtgaaaa tctgctggtg gatcagccga aaagccagac taacgtactg
     2821 gtctccctga ctcaggccgc acctgatggc ggtgattcgc tgctggtttc ggcggtaaaa
     2881 cgcctgagcg atcgcctcgg tatcactgtg caacaggccg cccatgcatg ggtcgatgca
     2941 tactgtcagc aagtgctaaa gccgctgttt acggctgaag cggattacgg cctggtgctg
     3001 ctggcgcatc agcaaaatat tcttgtccag atgcttgggg atctgccggt cggatttatt
     3061 taccgtgact gtcagggcag cgcttttatg cctcacgcga cagactggct cgattctatt
     3121 ggcgaggcgc aggcggaaaa tattttcacc catgagcagt tgctgcgcta ttttccttat
     3181 tacctgctgg ttaactccac ttttgctgtg accgctgcgc tgggggctgc cgggctggac
     3241 agcgaatcga atctgatggc tcgtgtacga gcatcgctgg ctgaagtgcg tgatcaggtg
     3301 actcataaaa cctgtctcaa ctacgtgctg gaaagtccgt actggaacgt aaaaggtaac
     3361 tttttctgtt atctgaacga tcataacgag aacaccattg ttgacccttc ggtgatctat
     3421 ttcgatttcg ctaacccgct gcaggctcag gaggtctgaa tgtctgaggc aaacattatt
     3481 cacagcagat atggactgcg ctgtgaaaaa ctcgacaagc ccctgaatct tggctgggga
     3541 ctggacaata gcgcggtgtt gcactgtccc ggggagctgc cgacagggtg gctgtgcgat
     3601 gcgctggatc agatatttat cgccgcacca caactgtcag cagtggctct cccctgggcc
     3661 gaatggcgtg aggagccaca ggcgctgacg ctttttgggc aggtaaaaag cgacattatc
     3721 catcgtactg ccttctggca gttaccgtta tggttgagtt caccggcaaa ccgggcctcc
     3781 ggtgaaatgg tttttgatgc agagcgtgag atttatttcc cgcagcgccc accccgtcca
     3841 cagggtgagg tttaccgccg ttacgatcca cgtattcgca ggatgctgag tttccgcatt
     3901 gccgatcccg tttctgatgc agaacgtttc acccgctgga tgaatgatcc gcgcgttgag
     3961 tatttctggg agcaaagtgg ctcactggag gtacagaccg cctatctgga gcgccagctc
     4021 accggtaaac atgcattccc gctgattggg tgcttcgacg atcggccatt cagctatttc
     4081 gaaatctact gggcggcgga agaccgcatt ggtcgtcact attcgtggca gccctttgac
     4141 cgtggcctgc atctgctggt tggtgaacag caatggcgcg gggcccacta tgtgcaaagc
     4201 tggctgcgcg ggctgacaca ttacctgctg ctggatgagc cccgtacgca gcgcacagta
     4261 ctggagccac gcaccgataa ccagcgcctg ttccgccatc ttgagcctgc gggataccgg
     4321 acaattaaag agttcgactt cccacataag cgctcgcgca tggtgatggc ggatcgtcat
     4381 cacttcttca cggaggtcgg tctgtaatga atcacaagga ctgggatttt gttaaccgtc
     4441 ggctggtggc aaaaatgttg tctgagatgg agtatgagca ggttttccac gcggaatctc
     4501 agggcgatga ccactactgc attaacctgc cgggagcaca atggcgcttc atcgctgaac
     4561 gtggtatctg gggctggctg tggattgatg cccaaacgtt gcgctgcacg gacgaaccag
     4621 tactggcgca gacgctgctg atgcagctaa agccggtgct gtcaatgagt gatgccactg
     4681 ttgcagagca tatgcaggat ttgtatgcca cgctactggg cgacctgcaa ctgctgaagg
     4741 cccgtcgcgg actgagtgcc agtgacctga ttaatcttga tgccgatcgt ctgcaatgcc
     4801 tgctgagcgg tcatcctaaa ttcgttttta ataaaggtcg ccgtggctgg ggcaaagagg
     4861 cgctggaacg atatgcgcca gagtatacca acaccttcag actgcactgg ctggcggtaa
     4921 aacgtgaaca tatgatctgg cgctgcgata acgatctgga tattcagcag ttgttgactg
     4981 ccgcaatgga tccgcaggag tttacacgct tcagtcaggt ctggcaggaa aacgggctgg
     5041 atcacaactg gctaccgctg ccggtacatc cgtggcagtg gcagcaaaaa atcgccacag
     5101 acttcatcgc tgattttgtc gaaggcagga tggtgtctct cggcgagttt ggcgaccagt
     5161 ggctcgccca gcagtcgctg cgtaccctga ccaacgccag ccgccgggga gggctggata
     5221 tcaagctgcc gctgaccatc tacaacacct catgctaccg ggggatccct ggcagatata
     5281 tcgctgccgg accactggct tcacgctggc tgcaacaggt ttttgcgacc gacgccaccc
     5341 tggtgcaaag cggcgcagtg atccttggtg aaccggcggc aggctatgtg tcccatgaag
     5401 gctatgccgc gcttgcccgg gctccctatc gctaccagga aatgcttggt gttatctggc
     5461 gggagaatcc gtgccgctgg ctgaaaccgg atgaaagtcc tgttctgatg gcaacactga
     5521 tggagtgcga cgaaaacaat cagccgctgg caggcgcata tatcgaccgc tccggactgg
     5581 acgctgaaac ctggcttacg caattgttcc gggtggttgt ggttccgctg tatcacctgc
     5641 tttgccgcta cggtgtcgcg cttattgcac acggacaaaa tataacgctc gccatgaaag
     5701 agggggtacc acagcgtgtt ctgctgaaag acttccaggg cgatatgcgg ctggtgaaag
     5761 aagcgtttcc cgaaatggac tctttgcctc aggaggtgcg tgatgccaca tcccgtctga
     5821 gtgcggacta cttaatccat gatttgcaga cgggtcactt cgtgacagta ctgcgtttta
     5881 tttcgccact gatggttcgt cttggcgtac ctgaaaggcg attttatcaa ctgctggcag
     5941 cagtgttgag tgattacatg aacaaacatc cacaaatggc agagcgtttt gcgcttttct
     6001 cactcttcag gccacaaatc attcgcgtgg tgctgaaccc ggtaaaactg acctggccgg
     6061 acctggatgg cggcagtcgc atgctgccga attaccttga gaatctgcaa aatccgctgt
     6121 ggctggtaac tcaggaatat gaatcatgaa aaaaagtgtc gattttattg gtgtcgggac
     6181 agggccattt aatctcagca ttgctgcatt gtcacatcag atcgaagaac tgaactgtct
     6241 cttctttgac gaacatcctc atttttcctg gcatccgggt atgctggtac cggattgtca
     6301 tatgcagacc gtctttctga aagatctggt cagtgcagtt gcacctacaa atccctacag
     6361 ctttgttaac tatctggtga agcacaaaaa gttctatcgc ttccttacaa gcaggctacg
     6421 tacagtatcc cgtgaagagt tttctgacta tctccgctgg gctgctgaag atatgaataa
     6481 cctgtatttc agtcataccg ttgaaaatat tgatttcgac aaaaaaagtc gattgtttct
     6541 ggttcagacc agtcggggag aatattttgc ccgcaatatc tgccttggta caggaaaaca
     6601 accttattta ccaccctgtg tgaagcatgt gacacaatcc tgtttccatg ccagtgaaat
     6661 gaatcttcgt cggccggacc tgagtggaaa acggataacc gtggttggtg gaggacagag
     6721 tggtgcagac ctgttcctta atgcattacg cggggaatgg ggagaagcgg cggaaataaa
     6781 ctgggtctca cggcgtaata attttaacgc actggatgag gctgcttttg ctgatgagta
     6841 ttttacacct gaatatattt caggcttctc cggactgaag gaagatattc gccatcagtt
     6901 actggatgag cagaaaatga catcggatgg catcactgcc gattctttac tgaccattta
     6961 tcgtgagttg taccaccgtt ttgaagttct gagaaaacca agaaatatcc gtctgctacc
     7021 cagtcgctcg gtaataactc tggaaagtag tggtccgggc tggaggttat tgatggaaca
     7081 tcatctggat cagggcagag agagcctgga aagtgatgtg gtgattttcg ccacaggtta
     7141 ccgttctgca ttgccacaaa tacttccctc actgatgccc ttgatcacca tgcacgataa
     7201 gaacaccttt aaagtgcgtg atgacttcac tctggaatgg agtggcccga aagaaaataa
     7261 catctttgcg gtcaacgcca gcatgcaaac tcatggcatc gccgaacccc agctcagcct
     7321 gatggcctgg cgatctgcac gtattcttaa tcgcgtactg gggcgtgatt tattcgatct
     7381 cagtatgccg cccgcactga ttcagtggcg cagcggcagc cggaaaaaac cgcagccgga
     7441 ggctgcttct ttaactcact atacagcaaa tattcaggaa taacgatgat gcgcaaaaag
     7501 tatatgcccc gggctcttgg tccgctgctt cttgtcgtgc tgtcaccagc tgtcgcccag
     7561 caaaacgatg ataatgagat catagtgtct gccagccgca gcaatcgaac tgtagcggag
     7621 atggcgcaaa ccacttggat tatcgaaaat gccgaactgg agcagcagat tcagggcggt
     7681 aaagagctga aagacgcact ggctcagtta atccccggcc ttgatgtcag cagccagagt
     7741 cgaaccaact acggtatgaa catgcgtggc cgcccgctgg ttgtcctgat tgacggtgtg
     7801 cgcctcaact cttcacgttc cgacagccga caactggact ctgtcgatcc ttttaatatc
     7861 gaccatattg aagtgatctc cggcgcgacg gccctgtacg gtggcgggag taccggaggg
     7921 ttgatcaaca tcgtgaccaa aaaaggtcag ccggaaacca tgatggagtt tgaggctggc
     7981 acaaaaagtg gctttaacag cagtaaagat cacgatgagc gcattgccgg tgctgtctcc
     8041 ggcggaaatg accatatctc cggacgtctt tccgtggcat atcagaaatt tggcggctgg
     8101 tttgacggta acggcgatgc caccctgctt gataacaccc agaccggcct gcagcactcc
     8161 aatcggctgg acatcatggg aaccggtacg ctgaacatcg atgaatcccg gcagcttcaa
     8221 ctgataacgc agtactataa aagtcaggga gacgacaatt acgggcttaa tctcgggaaa
     8281 ggcttttccg ccatcagcgg gagcagcaca ccatacgtca gtaaggggct gaattctgac
     8341 cgcattcccg gcactgagcg gcatttgatc agcctgcagt actctgacag tgatttcctg
     8401 ggacaggaac tggtcggtca ggtttactac cgcgatgagt cgttgcggta ctacccgttc
     8461 ccgacggtaa atgcgaataa acaggcgacg gctttctcct cgtcacagca ggataccgac
     8521 cagtacggca tgaaactgac tctgaacagc caactgatgg acggctggca aatcacctgg
     8581 gggctggatg ctgagcatga gcgctttacc tccaaccaga tgttcttcga tctggctcag
     8641 gcaagtgctt ccggagggct gaacaaccat aagatttaca ccaccgggcg ctatccgtca
     8701 tatgacatca ccaatctggc ggccttcctg caatccagct atgacattaa tgatattttt
     8761 accgttagcg gtggcgtacg ctatcagtat actgagaaca gggtagatga tttcatcgac
     8821 tacacgcagc aacagaagat tgctgccggg aaggcgatat ctgccgacgc cattcctggt
     8881 ggttcggtag attacgataa ctttctgttc aatgctggtc tgctgatgca catcaccgaa
     8941 cgtcagcagg catggttcaa tttttcccag ggggtggcat tgccggatcc ggggaaatat
     9001 tatggtcgcg gcatctatgg tgcagcagtg aacggccatc tttccctgac aaagagcgtg
     9061 aacgtcagcg acagtaagct ggaaggcgtg aaagtcgatt cttatgaact gggctggcgc
     9121 tttaccggtg acaacctgcg gactcaaatc gcggcatatt actcgctttc caataagagc
     9181 gtggaaagga ataaagatct gaccatcagt gtgaaggacg acaggcgccg tatttacggc
     9241 gtggaaggtg cggtggacta cctgatcccg gatactgact ggagtaccgg tgtgaacttc
     9301 aatgtgctga aaaccgagtc gaaagtgaac ggtcaatggc aaaaatatga cgtgaaggaa
     9361 tcaagtccat cgaaagcgac agcttacatt aactgggcgc cggaaccgtg gagtctgcgt
     9421 gtacagagca ccacttcttt cgacgtaagc gatgcagagg gtaacgatat taatggttac
     9481 actaccgtcg attttatcag tagttggcag cttccggtgg gaacactcag cttcagcgtt
     9541 gagaacctct tcgaccgtga ctataccact gtctggggac agcgtgcacc tctgtactac
     9601 agcccgggtt acggccctgc ttcactgtac gactacaaag gccggggccg aacctttggt
     9661 ctgaactact cagtgctgtt ctgacgggga tgcttttgca acaagggtat gctgtaaaca
     9721 acatggtcct tggtggccat gttgtttaca gccagtataa tatacagcct taacaagata
     9781 ttccgtctcc ggaatggact gttcaccact gaataacatt atttctgttt tatggatctt
     9841 tgactgaaat ttatcgcata tcctcatttc attgtccgtc tgaaaactaa ccttacaagt
     9901 aagcgtcgtc tcagcaccgt ctggcagatc ctgaaattcc tgagaggatg atctg
//
LOCUS       DADKRT010000163         9953 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.166, whole genome shotgun sequence.
ACCESSION   DADKRT010000163 DADKRT010000000
VERSION     DADKRT010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9953
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.166"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            143..400
                     /locus_tag="JQ356_003375"
     CDS             143..400
                     /locus_tag="JQ356_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000177060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623366.1"
                     /translation="MTLVNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFP
                     LAKKGEGRARLPSLYASFGKLGETPTHEDIIDNNRSINWPV"
     gene            complement(958..1725)
                     /gene="fecE"
                     /locus_tag="JQ356_003376"
     CDS             complement(958..1725)
                     /gene="fecE"
                     /locus_tag="JQ356_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter ATP-binding
                     protein FecE"
                     /protein_id="HAY4623367.1"
                     /translation="MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTL
                     LNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVSYGRN
                     PWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVV
                     LLDEPTTYLDINHQVDLMRLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMA
                     QGTPEEVMTPGLLRTVFSVEAEIHPEPVSGRPMCLMR"
     gene            complement(1726..2682)
                     /gene="fecD"
                     /locus_tag="JQ356_003377"
     CDS             complement(1726..2682)
                     /gene="fecD"
                     /locus_tag="JQ356_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter permease
                     subunit FecD"
                     /protein_id="HAY4623368.1"
                     /translation="MKIALVIFITLALAGCALLSLHMGVIPVPWRALLTDWQAGREHY
                     YVLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLL
                     MPSLPVMVLPLLAFAGGMAGLILLKMLAKTHQPMKLALTGVALSACWASLTDYLMLSR
                     PQDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLG
                     VSVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTG
                     ALLLVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR"
     gene            complement(2679..3677)
                     /gene="fecC"
                     /locus_tag="JQ356_003378"
     CDS             complement(2679..3677)
                     /gene="fecC"
                     /locus_tag="JQ356_003378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-dicitrate ABC transporter permease FecC"
                     /protein_id="HAY4623369.1"
                     /translation="MTAIKHPMLLWGLPVAALIIIFWLSLFCYSAIPVSGADATRALL
                     PGHTPTLPEALVQNLRLPRSLVAVLIGASLALAGTLLQTLTHNPMASPSLLGINSGAA
                     LAMALTSALSPTPIAGYSLSFIAACGGGVSWLLVMTAGGGFRHTHDRNKLILAGIALS
                     AFCMGLTRITLLLAEDHAYGIFYWLAGGVSHARWQDVWQLLPVVVTAVPVVLLLANQL
                     NLLNLSDSTAHTLGVNLTRLRLVINMLVLLLVGACVSVAGPVAFIGLLVPHLARFWAG
                     FDQRNVLPVSMLLGATLMLLADVLARALAFPGDLPAGAVLALIGSPCFVWLVRRRG"
     gene            complement(3674..4576)
                     /gene="fecB"
                     /locus_tag="JQ356_003379"
     CDS             complement(3674..4576)
                     /gene="fecB"
                     /locus_tag="JQ356_003379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter
                     substrate-binding protein FecB"
                     /protein_id="HAY4623370.1"
                     /translation="MLAFIRFLFAGLLLVISHAFAAMVQDEHGTFTLEKTPQRIVVLE
                     LSFADALAAVDVSPIGIADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDL
                     IIADSSRHAGVYIALQQIAPVLLLKSRNETYAENLQSAAIIGEMVGKKREMQARLEQH
                     KERMAQWASQLPKGTRVAFGTSREQQFNLHTQETWTGSVLASLGLNVPAAMAGSSMPS
                     IGLEQLLAVNPAWLLVAHYREESIVKRWQQDPLWQMLTAAQKQQVASVDSNTWARMRG
                     IFAAERIAADTVKIFHHQPLTVVK"
     gene            complement(4621..6945)
                     /gene="fecA"
                     /locus_tag="JQ356_003380"
     CDS             complement(4621..6945)
                     /gene="fecA"
                     /locus_tag="JQ356_003380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate transport protein FecA"
                     /protein_id="HAY4623371.1"
                     /translation="MTPLRVFRKTTPLVNAIRLSLLPLAGLSFSAFAAQVNIAPGSLD
                     KALNQYAAHSGFTLSVDASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSW
                     TLEPAPAPKEDALTVVGDWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRI
                     PGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPVS
                     LGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPK
                     ETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLL
                     QYYDGEADMPGGLSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDSQHKFNIQGF
                     YTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYVNESTHE
                     MRYYTATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGNWTITPGMRFEHIESYQ
                     NNAITGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVE
                     PEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQAR
                     YDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTF
                     NLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKN
                     IFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF"
     gene            complement(7032..7985)
                     /gene="fecR"
                     /locus_tag="JQ356_003381"
     CDS             complement(7032..7985)
                     /gene="fecR"
                     /locus_tag="JQ356_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fec operon regulator FecR"
                     /protein_id="HAY4623372.1"
                     /translation="MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQ
                     DNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSE
                     TGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTA
                     KDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNA
                     GESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVA
                     GLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISPL"
     gene            complement(7982..8503)
                     /locus_tag="JQ356_003382"
     CDS             complement(7982..8503)
                     /locus_tag="JQ356_003382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HAY4623373.1"
                     /translation="MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQD
                     TFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPE
                     ERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKA
                     VEHCLLFRLEYGL"
     gene            8779..8983
                     /locus_tag="JQ356_003383"
                     /pseudo
     CDS             8779..8983
                     /locus_tag="JQ356_003383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8977..9081
                     /locus_tag="JQ356_003384"
                     /pseudo
     CDS             8977..9081
                     /locus_tag="JQ356_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612091.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            9421..9678
                     /locus_tag="JQ356_003385"
     CDS             9421..9678
                     /locus_tag="JQ356_003385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm development YmgB/AriR family protein"
                     /protein_id="HAY4623374.1"
                     /translation="MHSDYYNMVFGEKLANILYEANSQFFYERNVIEEAVNALFCERE
                     IINNKNIIKKLMFFLSDVNHTKKDVVQSALNIIIDITSGDI"
BASE COUNT         2308 a         2656 c         2722 g         2267 t
ORIGIN      
        1 ccaaacgaat cagaaaaccg atactggaaa aactctaacg cggaggccag ttttagttga
       61 ccacaacaga ctacctgaag ggagccgcgg tcgcctagca gttgcagtag caggagatca
      121 tccagccgca gtacaggtca cgatgactct ggttaatgat accggctttg accccgtatt
      181 ttccggctct atcgctgaat catggcgtca gcagccgtgc acaccatcct attgttgtga
      241 ctgggaggct gccaccatgc ttcgcgcttt ccctctggcg aaaaagggag aaggacgggc
      301 ccgtctgcct tcactttatg ccagcttcgg taagctgggt gagacaccga ctcatgaaga
      361 tatcattgat aacaatcgat ccatcaactg gcctgtataa cgtggctgcc ggtgattaag
      421 aaagctgcac ctacctaagt agtagcaaac gcacactttt tagaaaaatc gatggtcaga
      481 aactggatta gcaattccgt tccagggttg cttttgattt acgttggcgt ctgatcattg
      541 atttatcctc aaaagcccaa cctcattggt aatgaaccag ctccgtgaat gtccgctctg
      601 gcacagagcg aaattttttg atctcccccc ctgaaatcta aacttagtca tgtcacgttt
      661 ttgggtttct aaaattttaa cttcgcgttt ttcgttgccg taagggttat acagaaatgt
      721 ccgttaagca gagttcaaaa ttgattgccg tgatcacgac tggtttgaaa gccgcgccca
      781 agcctgtaca gctctggttt gcgttgatta tgaacctgtc agcctaaagc aagcggatgg
      841 acgatgagta ttggtaatct ttcagagtcc ggaaaagttc agccccagtc tgaacaggct
      901 tgctggcgcc agtccagttt cattcagtcg tggtttggtt cttacggcct gtgcaatcta
      961 cctcattagg cacatcggcc tgccagatac cggctcgggg tgtatttccg cttccacgct
     1021 gaatactgtt ctcagcaatc ctggggtcat cacctcttct ggtgtgcctt gcgccataac
     1081 atgtccgttt gccattacca ccagttgatc gcagtaccgg ctagcctgat taaggtcgtg
     1141 cagcacagcg accaccgttt tcccctgagt ccggagttcg cccatcaacc gcatcaggtc
     1201 cacctggtga ttgatatcaa gataggtggt tggctcatca agtaatacaa cgggcgtatt
     1261 ctgggccagg accatcgcca gaaatgcgcg ctggcgctga ccgccggaaa gctcggttaa
     1321 ccgacgaacg gcaagatgat tgatccgggt ctggttcatg gcgacattaa ctcgtgcatt
     1381 gtcttcagcg gagagacgcc cccagagtga cagccaggga ttacgaccat acgaaaccag
     1441 ctcctggact gtgatcccct ctggcgttaa atggtgctga ggcagcagcg aaagcctgcg
     1501 ggccaactgg cgtgatgaga gcatatttat gggattatcg ccgagaaata cggtgccaga
     1561 ctgcggcatt aaaagccgcg aaaaacagtt taacagcgtc gatttcccgc aaccgttagg
     1621 gccgatcagg gcggtgatct tccccgttgg cagtgagagt gaaacgtcgt taagtacctt
     1681 gtctgtcccg taactgaccg tcagattttc agttcgtaaa gtcatttatc gcattctcac
     1741 aagcaaccag acaaaccacg gcgcaccgat aatggcggtc agcacgccaa ccgggagctc
     1801 cagtggggga tgaataattc tcgccagcag atcggcaacc accaacagca acgcacctgt
     1861 cagggctgaa acaggcagca gtctgcggtg acgtccaccg gtgatgctac gcatcatatg
     1921 cggcaccacg agaccaataa agctaatcgg gccgcaggcg gccacgccgg tagatgtcat
     1981 ggcgacagct agtaacaaag cccagaatcg ggtatggggc accgacacac cgagcgtggt
     2041 ggcgcgcgca tcgccgagtg caaggaggtc gagatcgcgg caaaaactca ggctcagcgg
     2101 cagaaataaa atcatcagcg ggatggcaat cttcacaaag ctccagtcac ggccccataa
     2161 gctgccggtc agccacagca gggcgttgtt cacatcctgc gggcgcgaga gcatcagata
     2221 atccgtcagg ctggcccagc atgcagaaag cgccacgccg gtgagcgcca gcttcatcgg
     2281 ctggtgggtc tttgccagca tcttcagtaa tatcaacccc gccatgccgc ccgcaaaggc
     2341 cagcagcggc agcaccatca cgggcagtga cggcataaga agtagagccc ccacagaggc
     2401 caggctggcg gcatggttaa cgccgagaat atccggtgat gccagagggt tgcgcacaat
     2461 cccctgtatc agcacgcccg ccacggcgag ggctgcaccg acaaacagtg ccagcagcaa
     2521 gcgcggcagt cggtactcca tcaatacata ataatgctcg cgtccggcct gccagtcggt
     2581 cagcagcgcg cgccacggca cggggatcac tcccatatgg agtgataaca gcgcacagcc
     2641 cgccagggca agggtgatga aaataaccag cgcaattttc atcctcgcct cctcacaagc
     2701 cagacaaagc aagggctgcc aatcagcgcc agcactgcgc ctgcgggcag atctccgggg
     2761 aaggccagcg cgcgtgcgag tacatctgcc agcagcatca gcgtggcccc cagcagcatg
     2821 ctcactggca gtacgttgcg ctgatcgaag cctgcccaga agcgcgccag atgtggcacc
     2881 agcagaccga taaacgccac cggacctgcc acgctgacgc acgcaccaac cagaagcagc
     2941 actaacatat tgatgaccaa acgtagcctc gtcaggttca ctcccagcgt atgggcggtg
     3001 ctgtcgctga ggttgagcag gttcagttga ttcgccagca gtaacacgac agggactgca
     3061 gtgaccacca ccggcaagag ctgccagaca tcctgccagc gggcgtggga cactccgcct
     3121 gccagccagt aaaagatgcc gtaagcatga tcttcggcca gcagcagggt gatgcgggta
     3181 aggcccatac aaaaggccga cagcgcgata cccgcgagga tcagtttgtt tctgtcatgg
     3241 gtatgacgaa atccgcctcc tgcggtcatg accagcagcc agctcacgcc gcccccgcat
     3301 gccgcgatga acgacagaga atagcctgca atcggcgtcg gactcagcgc gctggtaagc
     3361 gccatagcca gcgccgcgcc gctgttaatg ccgagcagtg aaggagaggc cattgggttg
     3421 tgggtcaggg tttgcagcag cgtgcccgcg agcgccaggc ttgcgccgat cagaacggcg
     3481 accaggcttc gtggcaaacg aaggttttgc accagcgctt ctggtagcgt tggcgtgtgt
     3541 ccaggcagca gggcgcgggt tgcatctgct ccggaaacag gaatggccga gtagcaaaac
     3601 agactcagcc agaaaataat aataagtgct gcaacgggaa gcccccacag cagcatcggg
     3661 tgttttatcg cggtcatttc acaacggtaa gcggctgatg gtggaagatt tttaccgtgt
     3721 cagcggcaat acgctctgca gcaaaaatac cgcgcatccg cgcccaggtg ttactgtcga
     3781 ccgaagcaac ctgctgcttc tgcgcggcgg ttaacatctg ccagagcgga tcttgttgcc
     3841 agcgtttaac aatgctctct tcgcgatagt gggcaaccag cagccaggca ggattgaccg
     3901 ccagcagttg ctccaggccg atggacggca tggacgaacc cgccatcgca gcgggaacgt
     3961 tcagccccag agaggccagc acgctgccgg tccaggtctc ctgagtatgc aggttgaatt
     4021 gctgttcgcg tgatgtgcca aaggccacgc gtgtcccttt gggaagctgg ctggcccact
     4081 gcgccatcct ctctttatgt tgttccagac gtgcctgcat ctctcgcttt ttacccacca
     4141 tttcgccgat gatagccgca gattgcaaat tttcagcgta ggtttcgttg cgggacttaa
     4201 gcagcagtac cggcgcgatt tgctgcaagg cgatgtaaac ccccgcatgg cgactgctgt
     4261 cggcaatgat caggtctggt ttcagagcgg caatggcttc caggctcggc tgcgcgcgcg
     4321 ttccgacgga ctgccacggt ttcaggtgcg cacgcacttc gggcaggatg cgttttgcat
     4381 cgttatcgtc ggcaataccg atcgggctga cgtccacggc ggccagcgca tcggcgaacg
     4441 agagttccag caccacaatc cgttgtggcg ttttttcgag tgtaaacgtg ccgtgttcgt
     4501 cctgaaccat ggcggcaaag gcgtggctga tcaccagcag caggcctgca aaaagaaaac
     4561 ggataaatgc caacataatc acattccagc taaaagcccg gcaagccggg cgttaacaca
     4621 tcagaacttc aacgacccct gcatatacag cgtgcgcggc tggcctgcat agatgccttt
     4681 gttgttgtcg tcataagagc ggatgaagta gtcctggtcg aagatgtttt tcacaccgaa
     4741 tgccaggttc agatctgcca tctgcgggcc aaagtcatac gccacgcgtg caccccagag
     4801 catgaagccg ggaatgcggc cggtactgcc gtcggcgctc tctttcaccg tattggcgtt
     4861 atccgcaaac tggctggact ggaaatcgct gttcagattg aacgtccagt ttcctggctt
     4921 gtagtccacg cccagcgtgc ctttatgttt cggggagaat ggtaccagat tgccgtaggt
     4981 gtcgcctttc tcgcggattt ccgcgttcac atacgcatag ctggcgtaga tggaaacgtt
     5041 atcaagcgtt ggcgttagcg tacccagatc gtaacgtgcc tgcgtttcca gcccggtatg
     5101 gcgcgttttg ccacgtgcag tgacggtgtc gttggtctgg ttggagtcgt actgattgtt
     5161 aaagttaatc aggaacagcc ccatttccgc cgtcagcgcg ccgtcgtcgt agcgggtacc
     5221 gagttcccag gttcgcgctt tttccggttc cacattgccg ctttgcacag ccttgccaat
     5281 ctggctgtac tgtacggtgc cgaacgagcc ttcagtgttt gcataaagat tccagctgtc
     5341 agtcaggtga tagagcacgt tcaacgccgg aagcggtgcg ttatagctca cttcttcgtg
     5401 cgtgcctgtg atggcgttgt tctggtatga ctcgatatgt tcgaaacgca tacccggcgt
     5461 gatggtccag ttgccgatgt cgattttgtc atccagatac caggcgtgcg cctcggtgcc
     5521 ggaacgcgta tcgcggtcgt aagggcttga gccggacggc aactgcccgc tgctggtggc
     5581 ggtgtagtaa cgcatttcat gcgttgattc attcacatag cgatagccca cgcccacttc
     5641 gtgcgcggaa gggccgatca taaagatctg gctgtagcgt ggctcaatac cgcgcaccca
     5701 gtagttacgc ggcgagaggg tgatgcgttt gccttgctcc aggtagccgc tgcgcagggt
     5761 ttgggtgtag aacccctgaa tgttgaattt atgctggctg tctggctgga actggtagcc
     5821 caggctcgcc agcttgcgac gaccccagaa gcggtcatac gggcgggtgg attgccagcg
     5881 atcggcgtcg taatccgcgc gagacaggcc accgggcatg tcggcttcac cgtcgtaata
     5941 ttgcagcagg ctgttgaagg tgtgcacctc atccggcgca tatttgcttt tcagcatcag
     6001 gtcgtcgatg cgggtggcgc tgtgctcgcg ccagtcactg ccgcgcgtgc cggagtagag
     6061 cagcgcggtg ccaaaaccgt tgtccgctgt gccgcccacc atcaggttgt gcgtctcttt
     6121 cgggttgttt tgtgaagagg ttgggctgag ctgaccttcc acgcccgcct cgataccaaa
     6181 gtcctgcgga atggcacggg taacaaagtt caccacgccg cccacgctct gcggtccgta
     6241 acgcaccgca ccaccaccgc gtaccacgtc aatggcatcc atgttgccga gcgaaacggg
     6301 agccagtgaa agctgcggct gaccgtaagg ggcgaagggg acggggatgc cgtccatcag
     6361 gacggtcgag cggctggcga ggcgcgggtt caggccccgg atgccaaagt tcatcgccag
     6421 gtcgtggctg ccggtgccgt tgttttccgg cgcgctgacg ccagggatgc ggttaagtac
     6481 ctcacgcatg gtggttgcgc cggttttggc gaaatcctca cggcggatca cgtcacgcgc
     6541 gccagcatgt tcaaatacgt cgttttcacg cgcatcaccc agccagtcgc cgaccacggt
     6601 cagggcatct tcttttggtg cgggcgcggg ctccagcgtc cagctgttat ttcccagcgg
     6661 ttttacctgc agtccgctgc cgtccagcag ttgttgcagg ccgctctcga cgtcgtaatc
     6721 gccgtgcagg ccgttgctct gcttgccgcg cgtcaggctg gcgtcaaccg agagggtaaa
     6781 tccgctgtgt gcggcatact gattgagcgc tttatcgagc gatcccggtg cgatattaac
     6841 ctgtgcagca aaagcggaaa acgagagacc ggccagcggc agcaggctca ggcgaatggc
     6901 gttaaccaaa ggtgttgttt tacgaaaaac gcgtaacggc gtcatacctt ccccatcatc
     6961 atttttgttg tgttcagcta tgagtcgaac gagaagggta aaaaggacaa tcgaaataag
     7021 aattattttc cttacagtgg tgaaatgttt atccagtacc gcgtaataga ctgaatttta
     7081 acgggaagcg tttgcgcgat aacgttcagg atcgcatcgg tatttttcag cgggaacgtc
     7141 ccgctcaggc gcagcccggc aacggcggga tcgcagcgca gcacgccgtt gcggtaacgg
     7201 gttagcgtgg ctatcacctc acccagcggt ttatcgctga agctcaggat gtccttcgtc
     7261 cagcttgtac tctcgtcatc cagcggtttc actgcgccaa actcagaggc gctgaactgc
     7321 aggctttcac cagcgttcac gatgcgtttt tgcgcggggg cactggcgag aagcacttcc
     7381 acagcgtgct gctgaacgtc aagctgcgtg aaattatcct gctggcggac ggtaaattct
     7441 gtccctaaag cagtgagctg gccctgacgg gtcaggacac ggaaggggcg ttgcagggca
     7501 tctttcgcgg tagtaatggc gatttcaccg taccagagcc ggacggtgcg ctgatgcgca
     7561 tcaaaacgca catccgccgc gctttgggta ttcagcgtga gcagggagcc atcttccagt
     7621 tgctgacggc tgactgtgcc tttggcggtg cggtaatctg cccgcagacc ttcgccggtt
     7681 tccgactgcc agagctgcca gcctccgcca gcgccgagca acagcagtaa tcctttcatc
     7741 acgtgacggc gggtgaggcg ggtatcgtgc aacgcccggc tggcaacgtc gccaggcaca
     7801 ccgccaagct ggttgcgcag gttttcaacc tgctgccagg cccactggtt atcctgatcc
     7861 tgttcatacc actgttgcca gcgcgcttcc tgttgtgggc tgacgcgctc gccgcttagc
     7921 acggcatacc agtgggaagc tgaacgcagc gcctgacggc gggaatcggt taacaaagga
     7981 ttcataaccc atactccaga cggaacagca ggcagtgctc gacggctttc gccacgtatt
     8041 ttttcacgga gctgatggaa acaccgagtt tgtgcgcaat ctcgctgtat gtcagaccat
     8101 ccagttgcga aagcagaaac gcttcacgtg ttttgccgtt tagcccgtcc agcatgctgt
     8161 cgaggagttg tagggtctcg agttggcttt cgcgttcctc aggtgaaggc gctcccccct
     8221 ccggcataag cgccagcatc tccagatacg ctttttccag cgcgtttcgg cgaaacaggt
     8281 ccaccatcac gcgtttggcg atagtgcaga ggaaggagcg aggatcgcgg atcgtcgaga
     8341 gcgtttcgct gaccattacc cgcaaaaaag tgtcctgggc aatgtcatct gcatcaaaag
     8401 cagactggag tttgcgcgtc agccagcttt tcaaccagcc gtgatgtgtg ccataaagcg
     8461 actcgaacgt taaggaagct gtggtagtgg cgcggtcaga catgcggagt gcatcaaaag
     8521 ttaattatca cgtagtcata ttaatatgag aatggttatc attacaattg gaaataaaat
     8581 tgtttccaat agacattttt aacatgttgt ttttctaagt gttataaggt aggtataaaa
     8641 tgggatggag cctctgcttc tgacatgtgt cggtcagaat gactcatgat gtggtctgct
     8701 attattgaca tcctcactgc cctaaaggat ggggatttcg gtaatgatct tacccagcaa
     8761 tagtggacac gcggctaagt gagtaaactc tcagtcagag gtgactcaca agacaaaaca
     8821 gtttcaacca gtaaaaaaac gtaaacacca ttcgcatgaa tttcgtagtt aagatctgaa
     8881 gcttgcagaa tgcatcggtg ttactgccgg agtccgtgaa cttagtctgc atgaatcacc
     8941 acagctttac atctgtcgca gtaaacagca aaatcagcaa acttacttaa ttatatcgag
     9001 tgcgattaca atcgctggcg atggtacagt tggtgtggcg gtctcagtcc ggaacaattt
     9061 gaaaatcata atctcactta aaacggcatc cattttacaa aagatggccg tctgtgtatt
     9121 tgtaatgaat accttctaca tgtttagagt gcataatcca cgacaaggcg atatcctaaa
     9181 aattagctag caggcaactt tgatggcata gataatgttt ttagtaaaaa agagttgact
     9241 gaatataata cagcctcttc ctacataaga aggaatgtgc tcacaaaaaa aaaccattag
     9301 tctgcttcct gttcttacaa taatcagtat tatgtatttt atttatatag caaaatatgc
     9361 ttgttacacc tgtcataatt aggcatggta aaattattga ctgaaccctg ggggagaaag
     9421 atgcacagtg attattataa tatggttttt ggtgaaaaat tggccaatat tttatatgaa
     9481 gctaactctc aattttttta cgagagaaat gtcatagaag aggcagtcaa cgctttattc
     9541 tgtgagcgtg aaataataaa caacaagaac ataataaaga agctgatgtt ctttttgtca
     9601 gatgttaatc acaccaagaa agatgttgtt cagagcgcac ttaatattat cattgacatt
     9661 acatcaggtg atatttgaga ttttacataa aagataatct ctcaaggagt cttatctgaa
     9721 aacgaaatat atagtccctc tcgttttgta atatcgattg gctttgttga atcggttacg
     9781 taccccggag ccggtcatat tttcaggtaa tacacacgct ttcagacatt tcggctttcg
     9841 tcatttttgt atcatgggca tagcttctgc tacctgacca tcataatcac gcagcttcag
     9901 tgaagcagtg accacctgtt taacccggtg tatcgttatg atcttatcca gca
//
LOCUS       DADKRT010000164         9937 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.167, whole genome shotgun sequence.
ACCESSION   DADKRT010000164 DADKRT010000000
VERSION     DADKRT010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9937
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.167"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..2107)
                     /gene="fdeC"
                     /locus_tag="JQ356_003386"
                     /pseudo
     CDS             complement(1..2107)
                     /gene="fdeC"
                     /locus_tag="JQ356_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308363.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="intimin-like adhesin FdeC"
     gene            2660..2749
                     /locus_tag="JQ356_003387"
                     /pseudo
     CDS             2660..2749
                     /locus_tag="JQ356_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308358.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
     gene            3223..3324
                     /locus_tag="JQ356_003388"
     CDS             3223..3324
                     /locus_tag="JQ356_003388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623375.1"
                     /translation="MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY"
     gene            3688..3951
                     /locus_tag="JQ356_003389"
     CDS             3688..3951
                     /locus_tag="JQ356_003389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HAY4623376.1"
                     /translation="MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPY
                     VTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGS"
     gene            3951..4091
                     /gene="rpmJ"
                     /locus_tag="JQ356_003390"
     CDS             3951..4091
                     /gene="rpmJ"
                     /locus_tag="JQ356_003390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HAY4623377.1"
                     /translation="MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKK
                     KR"
     gene            complement(4126..4353)
                     /locus_tag="JQ356_003391"
                     /pseudo
     CDS             complement(4126..4353)
                     /locus_tag="JQ356_003391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414829.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5175..5717
                     /gene="ecpR"
                     /locus_tag="JQ356_003392"
                     /gene_synonym="matA"
     CDS             5175..5717
                     /gene="ecpR"
                     /locus_tag="JQ356_003392"
                     /gene_synonym="matA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECP biosynthesis operon DNA-binding
                     transcriptional regulator EcpR"
                     /protein_id="HAY4623378.1"
                     /translation="MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD
                     FVFINLNTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAG
                     LSRDIRKELAYVINCRFLRKDIKKDKITDQEMEIIRMTAQGMQPKSIARIENCSVKTV
                     YTHRRNAEAKLYSKIYKLVQ"
     gene            5743..6378
                     /gene="ecpA"
                     /locus_tag="JQ356_003393"
                     /gene_synonym="matB"
     CDS             5743..6378
                     /gene="ecpA"
                     /locus_tag="JQ356_003393"
                     /gene_synonym="matB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000150122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="common pilus major fimbrillin subunit EcpA"
                     /protein_id="HAY4623379.1"
                     /translation="MTHWDITSSIQLGKKCNEKKVLAIALVTVFTGMGVAQAADVTAQ
                     AVATWSATAKKDTTSNLVVTSLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKL
                     TSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYN
                     ASNRTTAQDGFTFTIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS"
     gene            6436..7104
                     /locus_tag="JQ356_003394"
     CDS             6436..7104
                     /locus_tag="JQ356_003394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623380.1"
                     /translation="MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNS
                     TDSARLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPAD
                     EKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
                     NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKF
                     IPVK"
     gene            7130..9653
                     /locus_tag="JQ356_003395"
                     /pseudo
     CDS             7130..9653
                     /locus_tag="JQ356_003395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414825.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9643..>9937
                     /locus_tag="JQ356_003396"
     CDS             9643..>9937
                     /locus_tag="JQ356_003396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="receptor"
                     /protein_id="HAY4623381.1"
                     /translation="MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENN
                     SDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNW"
BASE COUNT         2676 a         2457 c         2310 g         2494 t
ORIGIN      
        1 ccaaccaccg gtttatcagg attcagggtg atggacgaat gtgctgcatc aagcggcccg
       61 gcaacaaact tcagcgtttg ttgtaatgtg cccagctgat actgctcgct gaaagcacgc
      121 acacacgcac aacaacgttt ccggcacggg tcgaagaaac cgtagcgctg taaacgcctg
      181 gttttatctc cgaaattgta ccaatggtga caccattagt gtcttgcgga acaaatcgca
      241 agcggctggc ctctcccgtc accgggttac catcagtatc caccgcagta agcgtcagcg
      301 tgtgggattg ctgaccatca gcaaccacat ctcctgagag ttcattcacg ctcagagtag
      361 acttcgacac atccatcatc gtggcgcgca attctgcagt gacggttttg ctcatgccat
      421 caacgctaac agtaatcgtt gcctcacctg attgcgttcc ggtagtgaag acagactgat
      481 acaccccagc ttcagtttca gtgaactcac ccagtgttgg ctttgcctgt gatttagtgg
      541 ccttcaggga acgagtcaca atatttccag ccggtttgaa agttagttca gtcttgatct
      601 gatctttcat gcccgtgact ggctggccct cggcgtcgcg cagagacagc accagcggtt
      661 tttgctcatt accgttagca agcatttgaa tacggctctg accgtcaagc gttaacgccg
      721 tgcgatcggc gctcatacca gctccggtaa tgaccacctc tgtctgcacg cgttttgagg
      781 tattgccttt gttatcgtag gcaaccgcag aaatcgcata ataattgtct ttgcctggac
      841 gataagccgg gagcgttact tgccactgac taccctgacc ggtaattttg ccaccttcag
      901 ccagtaatga cggcgcttcc cactgcacat ttttcagtcc gtgagttgct ttgctgacca
      961 caagcccgag ggaaagtgtc tgacagccct tgccttcaat acgctcaggc agagcaatac
     1021 ggatcacttc agatttgcgg tactcaagaa cgatgttgtt attacgctca accaggtcat
     1081 agcggctgcc tgctagcatt cgacgctcgc gaatgctgtc tgtatcgagt tgtttctcca
     1141 gaggttcgcc aatccgataa ttaacttcca ggccaaagcg agtgtcattc tcaccactct
     1201 tgccctgctt atgcccggca ctcagggtca gaagaggcac aggcgtgtaa ttcacttcag
     1261 cggaaatcgc atgtggatct ttctggcgtt tatctttgcc aaacagccca acttcatcgc
     1321 cataatactg ctcatacatc aggcttgcgc caagctgcgg tcaggcgggt aaatagccct
     1381 cagcacgaat atcccagcca ttcgccgggc gttcctgata atcctcaata tccggcgatt
     1441 ttttccagcc agaagcccga atataaccat tggcgctcag tttcagataa tcgcgccagt
     1501 attccgcacc aacaccaatg cgggtatgac tacgggataa atcatggtcg ataaaggtgt
     1561 tccccccccc cattcagtca tttcctgaaa aatgacgcca gccaaaacca atatttgact
     1621 gagtacgatc gtctgtacga tgtattgccc cctgagtgaa caacatattt gtcggcgtat
     1681 cataaatcgg ataaagcatt tccagcgaag aatccttcag cgagaaatct ttatcgacat
     1741 tcagtttgac gcgcgctgta ccatatttcc cgagccactc ctgtatttcc tggttagctt
     1801 tagcggtggc cattccggta ataaaattac gtgtcgcatc gctatctggc tgactgctta
     1861 aaaatgtccc ggcatttgcg gcaaacgacg cgacattttt ctccacgtta ttatcagcag
     1921 ttaccgtagt atttcccatg ctcaaccgtg gctgaaccgc atgctgcgca cgtgccgcca
     1981 ttactggggt aaaggtgaca gcgagtggaa aaagaacctg aacagagata tttgcccacg
     2041 ccacgcagcg ggccagaact gaataacgaa atcgtggttg tttatgacct gttttataac
     2101 gtgacattga gataatttcc tgatgaacga attaacgaac ataggcagac acaaataatg
     2161 gcgtctgctt gtcagaaaaa ccggggattt cccggtttcc ttttccgcag aaaaggaaat
     2221 acctttatgt aagaaagtgc accgccacct gatatatcca gtgtctgtag ccactcatca
     2281 ggtggttggg cgcgggatta tatttttatt tatgggtaaa aatttagctt tttgtgcaag
     2341 tcattaaata gatacctaag ttatatttct tactctgcgg acagtgaata attcattatt
     2401 cagactgaat aataatgacc tgcctttaat tagcaactat tggaaatacg tcgaagtagg
     2461 tatatacgcc aggataaacc gatatattta ttatggatat tcattttcct tcatcggact
     2521 gtaaattgcg gggatatcga acttacacta ctcatcgcaa cactcaaaca gatttatgaa
     2581 tttcgttcat aacccctgac aaatcctgcc gtctaatcga gcttttccct ttacgttatg
     2641 cttctcatga acgagaacac aacttattca tgaattaacc attccggata aactatggaa
     2701 tcaaattcag gcatcgaaag gaactggctg gtttccgtta atagattaaa tatctattac
     2761 tctcccgaga gtaaaactat caaatcaatg agtaaccgat acagcctcac aaattctttc
     2821 agataattaa cccgtcactg cggcacgttc tctcgtaagg cgtgcctgca gtgtaatcca
     2881 gtatgtatcc ggcatagttg acggtttaat agaactcaat tcctctccct ggtcaccaac
     2941 aacgatatct tgtataacac cccaggagat acgacattat gatgagatgc gatatgctcc
     3001 tcagcaccaa tcaacgccag gactgggcca gtcttgagat cagactcatt cccgggactg
     3061 acttcagtcg acatatatca atgacgttgg tgcaataaaa gatagccgat gtaatacatc
     3121 tattcaaatt tgtgatacat gtcaaaaaac tggttgacca aactcgttat ttatataagg
     3181 gcacttacga agtgcgctct tttttaaagc gaggaagtac caatgaaaga gaataaagta
     3241 caacaaatca gtcataaact aattaatatc gttgtttttg tcgcaattgt agaatacgcc
     3301 tatttatttc tccatttcta ttaataacgg caataaactg ttcacttcag tgatatttaa
     3361 aatatgcatt ctctcccttt ttgtaagtaa ttattatatc cgtgggagag gaatacacgc
     3421 tgtcaggtaa tcaatcatac tgcgataaat catcggccag taaagtggag ataacctcca
     3481 ttgtcgaaaa atccatactc tcagcgaaac catcatcaat cactcatcca ggcgtttatg
     3541 ggagcgtcgc caacggctgt taacaatgcc agacttcccc gttgcggaaa ttccacatac
     3601 cactaatggt cacagggatt gggtgttgaa atgatccgga tgagcatgta tctttatggt
     3661 tatgctataa cataacaggt aaaaatgatg aagcccaata tccatcctga gtatcgtact
     3721 gtggtgttcc acgacaccag tgttgatgag tactttaaaa tcggctcgac tatcaaaaca
     3781 gaccgtgaga ttgagctgga tggcgtaacg tatccgtacg tgacaattga tgtctcttct
     3841 aaatcgcacc cgttctatac agggaagctg agaacagtgg catcagaagg aaatgttgca
     3901 cgattcaccc aacgttttgg tcgttttgtt agcacgaaaa aggggtcgtg atgaaagttc
     3961 ttaactctct gcgtaccgca aaagaacgcc atccagactg tcagattgtg aagcgaaaag
     4021 gacggctata tgtgatttgt aaatctaatc cacgttttaa ggccgttcag ggtcgtaaga
     4081 aaaaacgttg attcaaaatt cgacggatta acgatatttg tctgattaat aatcagatcg
     4141 gattaatgtt ggtgtgttta taacaccaac attaattttc ctggggatat attcttcctg
     4201 ttcatttgag gccaactgcc tgacgtttct ctacgaatat tccattatct taatgttgac
     4261 ttgttgacca gcttcgcccc tgtatgctgg catcaactct cttttagact gaacacgcca
     4321 ctcagtctcc tccctttgcg gcgcagcctg cattttcact caaactgtta agatgataaa
     4381 tgtggtaaat ctgttggtac taacataaaa acgtttacgc cacaggaaca gtctgatcca
     4441 ccggtaaccc cgtcgccgac gttcgagtgc cagttagagt aacgcgcaca gataactgca
     4501 ctcagtgccc tgacaaagag gccatcgttc ctgtgacagc tggcagcctt cgtttaactt
     4561 cacttaatct ggctcttgag ggcttaccga acagatgacg tacatacgcc cgttcaattt
     4621 tccatcactt attgtaatga acacctataa ccattttgtg cggcatgtta atccattaaa
     4681 atttcttact gattggcaaa tcatcttcaa tgacagctca ttatagtttt atattctatc
     4741 ccttaccctt aaaacttgtt tttttactag tccatcacac agcgcattaa gactattcct
     4801 aacacttcag ggcaaagttc ctgaccaata taaaatgcaa gtaagaattg aacgttatat
     4861 tgccaataac cttatgaaac caaatgtctt tttcttctta tcaaaaaaac aatattttca
     4921 gtttttctaa atattgactt aaccattgaa ttccttttcc gttcacatat tgacactcat
     4981 cgaaaaaaaa cataaattta agcccaatcg aaaataatta aacttaatct cgtttaacct
     5041 ttattgatat gtactacgta tcttatttac ttccggttta ctaaggaaac tgaatgcacc
     5101 tgtaaaaatt acaggtttgg aaagtagtga catggcaaag tgattacagt agggactatg
     5161 aggttaaaaa ccatatggaa tgtcaaaacc gttctgataa atacatctgg tctccccatg
     5221 acgcctactt ctataaagga ctatctgaac tgattgtgga tatcgacaga ttaatttatc
     5281 tatcgttgga gaaaattaga aaagatttcg tgtttatcaa tctcaatacg gattctttat
     5341 ctgaatttat aaaccgtgat aatgaatggt tatccgcggt aaaggggaaa caggtcgtat
     5401 tgattgcggc cagaaagtca gaagccttag caaattattg gtactacaac agcaatatta
     5461 ggggcgtggt atacgctgga ctgagtcgtg atattagaaa agaactggcc tatgtgatta
     5521 attgcaggtt cctgagaaaa gatattaaga aagataaaat cacggaccag gaaatggaaa
     5581 ttatccgcat gacggcccag ggaatgcaac ctaaatcgat tgccagaatt gaaaattgta
     5641 gtgtgaagac agtgtatacc catcggcgta atgctgaggc caagctgtac tcaaaaatat
     5701 ataagttggt tcagtaaact ccaggcaagt tagttttaaa aaatgactca ctgggacatc
     5761 acgtcctcaa ttcaactcgg gaagaaatgc aatgaaaaaa aggttctggc aatagctctg
     5821 gtaacggtgt ttaccggcat gggtgtggcg caggctgctg acgtaacagc tcaggctgta
     5881 gcgacctggt cggcaacagc caaaaaagac accaccagta atctggttgt gacgtcactc
     5941 ggtagcttgg cgttccagta tgccgaaggc attaaaggtt ttaactcaca gaaaggtcta
     6001 tttgacgtgg ctatcgaggg tgactcaacg gctaccgcct ttaaactgac ctcacgtctt
     6061 atcaccaaca cattaactca gttggatacc tcaggttcca cactgaatgt gggcgtggat
     6121 tataacggcg cggcagtcga aaaaactggc gataccgtga tgatcgatac cgccaacggc
     6181 gtactgggcg gcaaccttag cccgctggct aacggttaca atgccagcaa tcgtaccacc
     6241 gcacaggatg gtttcacctt caccatcatc agcggcacca ccaatggtac caccgcagta
     6301 accgattaca gcactctacc ggaaggcatc tggagcggcg acgttagcgt acagttcgac
     6361 gcgacctgga ccagttaatc tctctgatgt accagcaggg gtagcccccc tgctttattc
     6421 ctggacggaa ttgttatgaa aaagcacctt ctgcctctcg ctctgctgtt ttccggaata
     6481 tctccggccc aggcgctgga tgtcggcgat atatcatcgt ttatgaacag tgacagcagc
     6541 acgctgagca aaacgatcaa aaacagtacc gacagtgctc gccttatcaa tatccgtctc
     6601 gaacggctct cttcaccgct tgacgacggg caggttatct caatggacaa gccggatgag
     6661 ttgctactca ctcccgccag cttgctgcta cccgcccaag ccagcgaagt gatccgcttc
     6721 ttctataagg gacccgcaga tgaaaaagag cgctactacc gcattgtctg gtttgatcag
     6781 gccctcagtg atgcgcagcg cgataatgcc aaccgcagcg ctgtggccac tgcttccgcc
     6841 cgcatcggca ccattctggt cgtcgcccct cgtcaggcga actaccactt tcagtacgcc
     6901 aacggctccc tgacaaatac aggaaatgcg acgctgcgga tcctcgccta cggcccctgc
     6961 ctgaaagccg ccaacggtaa ggagtgtaaa gagaattact acctgatgcc gggcaagtcg
     7021 cgtcgtttta cccgcgtgga cactgcggat aacaaaggac gggttgcact ttggcagggt
     7081 gataagttca ttcccgtgaa atagatagct gtgcagatgg ataacgacaa tgcctttacg
     7141 acggttctcc ccaggactga aagcccagtt tgccttcggc atggtctttt tgttcgttca
     7201 gcccgatgcc agcgctgctg acataagtgc gcagcaaata ggtggggtga ttattccgca
     7261 ggccttcagt caggcgcttc aggacggcat gagcgtcccg ctctatattc atctcgccgg
     7321 tagtcagggt cgccaggacg atcagcgaat cggcagcgct tttatctggc tggatgatgg
     7381 acagctacgc atccggaaaa tacagctgga agagagtgaa gataacgcca gtgtcagcga
     7441 acaaactcga cagcagctga tggctctggc gaacgccccg ttcaatgagg cccttaccat
     7501 cccctgactg acaacgcgca gttggatctc agcttgcgcc aactgctgct gcagctggtg
     7561 gtcaagcgcg aagcgctggg caccgtacta cgctcacgta gcgaagacat cgggcagtcc
     7621 agtgttaaca ccctcagcag taatctgagc tataacttgg gcgtctataa caaccagttg
     7681 cgtaacggcg ggagcaacac atccagctat ctgtcgctga ataacgttac tgcgctgcgc
     7741 gaacatcatg tggtgctcga cggctcgctg tacgggatcg gtagcggtca acaggacagt
     7801 gaattatata aagcgatgta tgaacgcgat tttgccggtc accgatttgc cggtggaatg
     7861 ctcgacacct ggaacttgca gtcattaggg ccgatgaccg ccatttcagc agggaagatt
     7921 tacggccttt cctggggaaa ccaggccagc tccaccatct tcgacagcag ccagtcagcc
     7981 acgccagtga tcgccttttt accggcggcg ggcgaagtac atctcacccg tgatgggcgg
     8041 ctactaagcg ttcagaactt cactatgggc aatcatgaag tggatacccg gggtctaccg
     8101 tacggtattt acgatgtgga agttgaggtg atcgttaacg gtcgcgtgat cagcaaacgc
     8161 actcaacggg tcaataagct gtttagccgg ggcgcggcgt cggtgcacca ctggcgtggc
     8221 aggtatgggg cggtagcttt catatggatc gctggtcgga aaacgggaaa aagacgcgac
     8281 cagctaaaga gagttggcta gcaggtgcct cgacctccgg ctcattgagt acgcttagct
     8341 gggcggcaac gggatatgga tacgataatc aggcggtggg tgaaacccgt ctgacgctgc
     8401 cgcttggggg ggcgatcaac gttaacctgc aaaatatgct ggccagtgac agctcatgga
     8461 gcagcatcgg cagcatcagc gctactctac cgggaggctt tagttcgctg tgggttaacc
     8521 aggaaaaaac ccgtattggc aatcaattgc gacgtagcga tgccgacaac cgtgcaatcg
     8581 gcggcacact caacctgaac tcactgtggt cgaagctggg cacattcagc atcagctaca
     8641 atgatgaccg ccgttacaac agccattatt acacggcaga ttactatcaa aatgtctaca
     8701 gcggtacctt tggttcgctt ggcctgcggg ccggtattca gcgctataac aacggcgaca
     8761 gcaacgccaa tacagggaaa tatatcgctc tcgatctctc gctaccactg ggcaactggt
     8821 ttagcgcagg gatgacccat caaaacggct acaccatggc aaacctgtca gcacgcaaac
     8881 agtttgatga agggaccatt cgcactgttg gtgccaatct gtcacgtgcc atctccggcg
     8941 ataccggtga tgacaaaacc ctcagcggtg gggcgtatgc acagttcgac gctcgttacg
     9001 ccagcggaac gctgaacgtc aatagcgcgg cggacggcta cgtcaatacc aacttgaccg
     9061 ccaatggcag cgtcggctgg cagggtaaaa acattgctgc cagcgggcgg actaatggca
     9121 acgctggggt gatattcaac accgggctgg aggacgacgg tcagatcagc gccaaaatca
     9181 acgggcggat tttcccgctt aacggcaagc gtaactatct cccgctctct ccctatggaa
     9241 gatatgaggt ggagttacag aacagcaaaa actcactcga cagttacgat atcgtcagcg
     9301 gccgcaaaag tcgtctgact ctctatccag gcaatgtcgc tgtcattgag ccagaggtga
     9361 agcagatggt taccgtctcc ggtcgtatcc gtgcggaaga cggcacactg ctggctaacg
     9421 cacggattaa caaccatatc ggccgaaccc gaaccgatga aaacggcgag tttgtcatgg
     9481 acgtggataa gaaatacccc actatcgatt ttcgctacag tggcaataaa acctgcgaag
     9541 tggctctgga actcaaccag gcgcgcggtg ccgtctgggt cggtgatgtg gtctgcagcg
     9601 gcctctcatc gtgggcggcg gtgacgcaga caggagaaga gaatgagagt taacctacta
     9661 ataacgatga taattttcgc gctaatctgg ccagtaactg cgctcagagc ggcagtgagc
     9721 aaaacaacct gggcggatgc accggcacgc gagtttgtgt ttgtcgaaaa caactcagac
     9781 gacaactttt tcgtcactcc tggcggggcg ctggatccgc gcctgaccgg tgccaaccgc
     9841 tggaccggtt taaaatacac tggttcagga accatctatc agcaaagcct cggctacatt
     9901 gataacggtt acaacaccgg cctttatacc aactgga
//
LOCUS       DADKRT010000165         9893 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.168, whole genome shotgun sequence.
ACCESSION   DADKRT010000165 DADKRT010000000
VERSION     DADKRT010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9893
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.168"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(55..1338)
                     /gene="aroA"
                     /locus_tag="JQ356_003397"
     CDS             complement(55..1338)
                     /gene="aroA"
                     /locus_tag="JQ356_003397"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HAY4623382.1"
                     /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
                     LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
                     AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
                     NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
                     HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
                     ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
     gene            complement(1409..2497)
                     /gene="serC"
                     /locus_tag="JQ356_003398"
     CDS             complement(1409..2497)
                     /gene="serC"
                     /locus_tag="JQ356_003398"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HAY4623383.1"
                     /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
                     EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
                     AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
                     ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
                     NIACPSILDYSIFNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
                     YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPLEGVKALTDFMVEFERRHG"
     gene            complement(2701..3387)
                     /locus_tag="JQ356_003399"
     CDS             complement(2701..3387)
                     /locus_tag="JQ356_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004991006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HAY4623384.1"
                     /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
                     VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGENNYVRAVQIQ
                     NGRRQVGQNG"
     gene            3517..5277
                     /locus_tag="JQ356_003400"
     CDS             3517..5277
                     /locus_tag="JQ356_003400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HAY4623385.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
                     TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGKAAFYGLQPVDSDLHAFAAH
                     QSLLKAYEKLQRAKAAFWAK"
     gene            5683..6540
                     /gene="focA"
                     /locus_tag="JQ356_003401"
     CDS             5683..6540
                     /gene="focA"
                     /locus_tag="JQ356_003401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HAY4623386.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRENDHH"
     gene            6595..8877
                     /gene="pflB"
                     /locus_tag="JQ356_003402"
     CDS             6595..8877
                     /gene="pflB"
                     /locus_tag="JQ356_003402"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY4623387.1"
                     /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT
                     EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI
                     RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDLLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQSM"
     gene            9069..9809
                     /gene="pflA"
                     /locus_tag="JQ356_003403"
     CDS             9069..9809
                     /gene="pflA"
                     /locus_tag="JQ356_003403"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HAY4623388.1"
                     /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
                     THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
                     CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
                     NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
                     LDGVKPPKKETMERVKDILEQYGHKVMF"
BASE COUNT         2536 a         2487 c         2353 g         2517 t
ORIGIN      
        1 atgtgccgac gttttgataa agaaagattt ggctatttat tgcccgttgt tcattcaggc
       61 tgcctggcta atccgcgcca actgctcgaa ataatccgga aatgttttgg ccgtacattt
      121 gggatcaaga atcgtcactg gtgtatctga caacgccacc agcgagaaac acatcgccat
      181 ccggtgatca ttgtatgtcg cgatctcggc aaagttcagt ttttccggtg gagtgatacg
      241 aatgtaatcg tgcccctctt ctacttccgc accgacttta cgcagttctg ttgccatcgc
      301 aaacaggcga tcggtttctt taacacgcca gttatagata ttgcgcagcg tggtggtgcc
      361 ttttgcaaat aacgccgccg tggcaatggt catcgccgca tcgggaatat ggttcatatc
      421 catatcaata gcgttcagtt caccacgcgt gcaggaaata taatcatcgc cccagcaaat
      481 ggtcgcgccc attttttcca gcacatcagc aaagcgaata tcaccctgca tactgttacg
      541 tccaataccg gtcactttta cagtgccgcc tttgattgct gctgctgcca gaaagtaaga
      601 agccgaagat gcatcgcctt cgaccaaata agtacccgga gactgataag actgtccgcc
      661 ttttacgaca aattgttgat agtgctgatt ttcaatttca acaccaaacg tcttcatcag
      721 attgagtgtg atgtcgatat aaggtttaga aaccagatcg cctttaatac gaatcaccgt
      781 atcttccggc gcaagaggcg cagtcattaa cagtgcggtg aggaattggc tggaaacgga
      841 gccatcaacg tcaacgttgc cgccagtaaa gccgccctgt aaacgcaacg gcggataatt
      901 ttcttgttcc aggtaagtga tcttcgcccc gcccaggcgc agcgcatcca ccagatgacc
      961 aatcgggcgt tctttcatac gcggctcacc ggtcagcaca atatcattgc tacccagaca
     1021 aagagctgcc gccagcggac gcattgccgt tccggcgtta ccgaggaaca actccagggc
     1081 accttctgcg tgtaatggac cgccgttacc gataatttcg caacgcgtac gatcggctga
     1141 aagcgtatag cttaccccta acgctgttaa tgcattcagc atatggcgca cgtcatcgct
     1201 atccagcaga ttggttaata ctgttttgcc gtgtgctaat gccgccagca ataaagcgcg
     1261 gttagaaacg ctcttggaac cgggcagatt aatagtgcca tcgacacgag cgatgggttg
     1321 taacgtcagg gattccatga actcaactct ctacaacaga aataaaaacc ccacaggctg
     1381 gctgtgggga ttaagcaaaa tttcggcatt aaccgtgacg gcgttcgaac tcaaccatga
     1441 agtctgtcag cgctttaacg ccttccagcg gcatggcgtt ataaatagaa gcgcgcattc
     1501 cgccgaccac acggtgacct ttcagtgcat gaaggccagc agcaaaagac tcttcaagga
     1561 acaatttgtc aagcgcactg tccgccaact ggaacggcac gttcatccgc gaacggttag
     1621 ctttcgccac gtcattgcgg tagaaatcgc tgttatcaat caccccatat agcagttctg
     1681 ctttttgctg attgatttta tccatttcag ctacaccgcc gttcgctttc agccatttaa
     1741 agaccagacc agatagatac caggcaaatg tcggcggcgt gttaaacatg gagccgttat
     1801 cgttgaagat ggaataatcc agtatcgacg gacacgcgat attcgctttg cccagcaaat
     1861 cttcacgaac gatgacgatt gtcaggccag ccgggccgat atttttctgc gcgccagcgt
     1921 aaatcacgcc ataacggctg acgtcaatcg gacgggaaag aatggttgaa gagaagtcgg
     1981 cggcgaccac cacatctttg ccgaagtctg gcgtttcgtc gatggcgata ccgtcgatgg
     2041 tttcattcgg gcagtaatgc atataagcag cattatcaga gagttgccat tcacgcattg
     2101 gcttaaccgc gcgcagacca tcaacagtca ctttggcgtc aaagacatta ggcgtgcagt
     2161 attttttcgc ttctttaatg gcacttgccg cccagtaacc ggcatcaaca taatctgcgg
     2221 tggttttatc accgagaata ttcagcggta ccgcagcaaa ctgaccgcga ccaccgccat
     2281 ggcagaataa taccttgtag ttggagggga cattaagaag atcgcgaaaa tccttctcgg
     2341 cttcctctgc aacctgaatg aactctttgc cacggtgact cacttccatc accgacgtac
     2401 caagaccgtt ccagtcgcgc agttcctgtt gagcctgttt aagcacctct gccggtagca
     2461 ttgccggacc agaactaaaa ttgaagattt gagccatttc ccctcaccac gttgcgttgc
     2521 tattaacccg cggtcaatcg attgcgacca caggtaatac attattcctg tggctatcgg
     2581 ttttatcatt cagtgacaca catcgcaatg agtaaaaccg ttgagggcaa aaatgaggct
     2641 tgcatcacac aaaagaatct ctcggattat tagcaaaaag ccgatgtttt tactgtcagg
     2701 tcacccgttt tgcccgactt gccttcgtcc attctggatt tgcacagcgc ggacataatt
     2761 gttttccccc gctttcatat gaatgatttc actacaacga atacaggcat agtccgccga
     2821 ctccggcacc actttgtaac gctgcgtaca atcactgggt aaaataagta aacccggttt
     2881 caccttgtca tcttcaaaga aatagacact gatttgcccg ttggtttcga gaatcgccag
     2941 acgtacctgc cccagctgct ccacgccacg caatcgtagc tccataaaga actcaaattc
     3001 cgtcatgttg gagttattga gtttcgacca ggccagctcg ccatcttcaa taataacaac
     3061 cggcttacct tccagtagat cttccagttt ttcactgtgc gccatcaacc acattaccag
     3121 gcggtataac aacgccagag tgataaagac gataagtacc ggcaccatcg gcacatcatc
     3181 ataaaacgcc acatctcccg ccgctgaacc cagcgtgaga atgattaaca cttcaaacag
     3241 cgacatctgt cgcacaccgc gtcttccggt cattttgagg aacaaaaaaa ccagtacaaa
     3301 ggtataaaga ctacgtagtg caacttcgcc aaggaaatca aaaggcactt tatcaaatgc
     3361 catacggtgg agatcgaacg ccttcatttt tatgctctta tcgtggttta ttcgctaaaa
     3421 gcatagtcaa cagttcatcg gcatggcggc ggtgatagcg cctttgagat aaaacccgta
     3481 ttattgcgcg ctttccgtac gactaaagtg attttcatga cgcaaacatt tatccccggc
     3541 aaagatgccg ctctggaaga ttccatcgct cgcttccagc aaaaactttc agacctcggc
     3601 tttcagattg aagaggcctc ctggctgaat cctgtgccta acgtctggtc tgtacatatt
     3661 cgcgacaaag agtgcgcact gtgttttacc aacggtaaag gcgcaaccaa aaaagcggcg
     3721 ctggcttctg cacttggtga atatttcgag cgtctctcaa ccaactactt ttttgctgat
     3781 ttctggctgg gcgaaaccat cgccaacggt ccgttcgtgc attatcccaa cgaaaaatgg
     3841 ttcccactga ccgaaaatga cgatgtgcca gaaggactac tcgatgaccg tctgcgcgcg
     3901 ttttatgatc cggagaatga actgaccggc agcatgctga ttgacctaca atccggtaac
     3961 gaagatcgtg gtatttgcgg cctgccgttt acgcgtcagt ccgacaatca gaccgtttat
     4021 attccgatga atatcattgg taacctgtac gtctccaacg gtatgtccgc aggtaatacc
     4081 cgcaacgaag cacgcgttca gggattgtct gaagttttcg aacgctacgt gaaaaaccgc
     4141 attattgctg aaagcatcag cctgccagag atcccggcag acgtgctggc gcgttaccca
     4201 gcggtggttg aagcgatcga aacactggaa gcagaaggtt tcccgatctt cgcatatgat
     4261 ggttcccttg gcggccagta tccggtgatt tgcgtggtac tgttcaatcc tgctaacggt
     4321 acctgctttg cctctttcgg tgcgcatcct gattttggcg tagcactgga acgtaccgtg
     4381 accgagctgc tgcaaggtcg tggcctgaaa gatttggatg tgtttactcc gccaaccttc
     4441 gatgatgaag aagtcgctga acataccaac ctcgaaacgc actttatcga ttccagcggt
     4501 ttaatctcct gggacctgtt caagcaggat gccgattatc cgtttgtgga ctggaatttc
     4561 tccggcacca cggaagaaga gtttgctacg ctgatggcta tcttcaacaa agaagataaa
     4621 gaagtttata ttgccgatta cgagcatctg ggcgtttatg cttgccgtat tatcgtgcct
     4681 ggcatgtccg atatttatcc ggctgaagat ctgtggctcg cgaataacag tatgggcagc
     4741 catttacgtg aaacgattct ttcgctacca ggcagcgagt gggaaaaaga agattacctg
     4801 aacctcatcg agcaactgga tgaagaaggt tttgatgact ttacccgcgt gcgtgagctg
     4861 ttgggtctgg cgaccgggtc ggataacggt tggtacaccc tgcgtatcgg tgaattaaaa
     4921 gccatgctgg cgctggctgg tggcgatctg gaacaggctc tggtctggac cgaatggacg
     4981 atggagttta actcatcagt atttagtccg gaacgcgcca actattatcg ctgcctgcaa
     5041 acgttgttat tactggcaca ggaagaagat cgccagccgc tgcaatatct gaatgcgttt
     5101 gttcgcatgt acggcgcaga tgccgtggaa gccgccagtg cggcaatgag cggcaaagcg
     5161 gcgttttacg gcctgcaacc ggtagatagc gatctgcacg cgtttgctgc acatcagtcg
     5221 ttgttgaagg cctacgaaaa gctgcagcgc gccaaagcag cattctgggc aaaataaaat
     5281 caaatagcct acgcaatgta ggcttaatga ttagtctgag ttatattacg gggcgttttt
     5341 ttaatgcccc gctttacata tatttgcatt aataaaataa ttgtaattat aaggttaaat
     5401 atcggtaatt tgtatttaat aaatacgatc gatattgtta ctttattcgc ctaatgctcc
     5461 cttttaatta actattttag cggaggatgc ggaaaaaatt caactcattt gttaattttt
     5521 aaaatttatt tttatttgga taatcaaata tttactccgt atttgcataa aaaccatgcg
     5581 agttacggac ctataagcca ggcgagatat gatctatatc aatttctcat ctataatgct
     5641 ttgttagtat ctcgtcgccg acttaataaa gagagagtta gtgtgaaagc tgacaaccct
     5701 tttgatcttt tacttcctgc tgcaatggcc aaagtggccg aagaggcggg tgtctataaa
     5761 gcaacgaaac atccgcttaa gactttctat ctggcgatta ccgccggtgt tttcatctca
     5821 atcgcattcg tcttctatat cacagcaacc actggcacag gcacaatgcc cttcggcatg
     5881 gcaaaactgg ttggcggcat ttgcttctct ctggggctga ttctttgtgt tgtctgcgga
     5941 gctgatctct ttacttccac cgtgttgatt gttgttgcta aggcgagtgg gcgcatcacc
     6001 tggggtcagt tggcgaaaaa ctggctaaat gtctattttg gcaacctggt cggcgcactg
     6061 ctgtttgtac ttttaatgtg gctttccggc gagtatatga ccgcaaatgg tcaatgggga
     6121 ctaaacgtcc tacaaaccgc cgaccacaaa gtgcaccata cttttattga ggccgtctgt
     6181 cttggtatcc tggcaaacct gatggtatgt ctggcagtat ggatgagtta ttctggccgc
     6241 agcctgatgg acaaagcgtt cattatggtg ctgccggtcg cgatgtttgt tgccagcggt
     6301 tttgagcaca gtatcgcaaa catgtttatg atcccgatgg gtattgtaat ccgcgacttc
     6361 gcatctccgg aattctggac cgctgtcggt tctgcaccgg aaaatttttc tcacctgacc
     6421 gtgatgaact tcatcactga taacctgatc ccggttacga tcggtaatat tatcggcggt
     6481 ggtttgttgg ttgggttgac atactgggtc atttacctgc gtgaaaacga tcaccattaa
     6541 tggttgtcga agtacgcagt aaataaaaaa tccacttaag aaggtaggtg ttacatgtcc
     6601 gagcttaatg aaaagttagc cacagcctgg gaaggtttta ccaaaggtga ctggcagaat
     6661 gaagtaaacg tccgtgactt cattcagaaa aactacactc cgtacgaggg tgacgagtcc
     6721 ttcctagctg gcgctactga agcgaccacc accctgtggg acaaagtaat ggaaggcgtt
     6781 aaactggaaa accgcactca cgcgccagtt gactttgaca ccgctgttgc ttccaccatc
     6841 acctctcacg acgctggcta catcaacaag cagcttgaga aaatcgttgg tctgcagact
     6901 gaagctccgc tgaaacgtgc tcttatcccg ttcggtggta tcaaaatgat cgaaggttcc
     6961 tgcaaagcgt acaaccgcga actggatccg atgatcaaaa aaatcttcac tgaataccgt
     7021 aaaactcaca accagggcgt gttcgacgtt tacactccgg acatcctgcg ttgccgtaaa
     7081 tctggtgttc tgaccggtct gccagatgca tatggccgtg gccgtatcat cggtgactac
     7141 cgtcgcgttg cgctgtacgg tatcgactac ctgatgaaag acaaactggc acagttcact
     7201 tctctgcagg ctgatctgga aaacggcgta aacctggaac agactatccg tctgcgcgaa
     7261 gaaatcgctg aacagcaccg cgctctgggt cagatgaaag aaatggctgc gaaatacggc
     7321 tacgacatct ctggtccggc taccaacgct caggaagcta tccagtggac ttacttcggc
     7381 tacctggctg ctgttaagtc tcagaacggt gctgcaatgt ccttcggtcg tacctccacc
     7441 ttcctggatg tgtacatcga acgtgacctg aaagctggca agatcaccga acaagaagcg
     7501 caggaaatgg ttgaccacct ggtcatgaaa ctgcgtatgg ttcgcttcct gcgtactccg
     7561 gaatacgatg aactgttctc tggcgacccg atctgggcaa ccgaatctat cggtggtatg
     7621 ggcctcgacg gtcgtaccct ggttaccaaa aacagcttcc gtttcctgaa caccctgtac
     7681 accatgggtc cgtctccgga accgaacatg accattctgt ggtctgaaaa actgccgctg
     7741 aacttcaaga aattcgccgc taaagtgtcc atcgacacct cttctctgca gtatgagaac
     7801 gatgacctga tgcgtccgga cttcaacaac gatgactatg ctatcgcttg ctgcgtaagc
     7861 ccgatgatcg ttggtaaaca aatgcagttc ttcggtgcgc gtgcaaacct ggcgaaaacc
     7921 atgctgtacg caatcaacgg cggcgttgac gaaaaactga aaatgcaggt tggtccgaag
     7981 tctgaaccga tcaaaggcga tctcctgaac tacgatgaag tgatggagcg catggatcac
     8041 ttcatggact ggctggctaa acagtacatc actgcactga acatcatcca ctacatgcac
     8101 gacaagtaca gctacgaagc ctctctgatg gcgctgcacg accgtgacgt tatccgcacc
     8161 atggcgtgtg gtatcgctgg tctgtccgtt gctgctgact ccctgtctgc aatcaaatat
     8221 gcgaaagtta aaccgattcg tgacgaagac ggtctggcta tcgacttcga aatcgaaggc
     8281 gaatacccgc agtttggtaa caatgatccg cgtgtagatg acctggctgt tgacctggta
     8341 gaacgtttca tgaagaaaat tcagaaactg cacacctacc gtgacgctat cccgactcag
     8401 tctgttctga ccatcacttc taacgttgtg tatggtaaga aaactggtaa caccccagac
     8461 ggtcgtcgtg ctggcgcgcc gttcggaccg ggtgctaacc cgatgcacgg tcgtgaccag
     8521 aaaggtgctg tagcgtctct gacttccgtt gctaaactgc cgtttgctta cgctaaagat
     8581 ggtatctcct acaccttctc tatcgttccg aacgcactgg gtaaagacga cgaagttcgt
     8641 aagaccaacc tggctggtct gatggatggt tacttccacc acgaagcatc catcgaaggt
     8701 ggtcagcacc tgaacgttaa cgtgatgaac cgtgaaatgc tgctcgacgc gatggaaaac
     8761 ccggaaaaat atccgcagct gaccatccgt gtatctggct acgcagtacg tttcaactcg
     8821 ctgactaaag aacagcagca ggacgttatt actcgtacct tcactcaatc tatgtaatta
     8881 gatttgactg aaatcgtaca gtaaaaagcg tacaataaag gctccacgaa agtggggcct
     8941 tttttagcac gagagccttt tttgtcagct atctatactt taaggtgact gccaaaacag
     9001 actcgacgta gccttcgagc tgcgcaccaa cacggcctca gatgggccac atctggagaa
     9061 ataccgcaat gtcagttatt ggtcgcattc actcctttga atcctgtgga accgtagacg
     9121 gcccgggtat tcgctttatc acctttttcc agggctgcct gatgcgctgc ctgtattgtc
     9181 ataaccgcga cacctgggac acgcatggcg gtaaagaagt taccgttgaa gatttgatga
     9241 aggaagtggt gacctatcgc cactttatga acgcttccgg cggcggcgtt accgcatccg
     9301 gcggtgaagc aatcctgcaa gctgagtttg ttcgtgactg gttccgcgcc tgcaaaaaag
     9361 aaggcattca tacctgtctg gacaccaacg gttttgttcg tcgttacgat ccggtgattg
     9421 atgaactgct ggaagtaacc gacctggtaa tgctcgatct caaacagatg aacgacgaga
     9481 tccaccaaaa tctggttgga gtttccaacc accgcacgct ggagttcgcc aaatatctgg
     9541 cgaacaaaaa tgtgaaggtg tggatccgct acgttgttgt cccaggctgg tctgacgatg
     9601 acgattcagc gcatcgcctc ggtgaattta cccgtgatat gggcaacgtt gagaaaatcg
     9661 aactcctccc ctaccacgag ctgggcaaac acaaatgggt ggcaatgggt gaagagtaca
     9721 aactcgacgg tgttaaacca cctaagaaag agaccatgga acgcgtgaaa gacattcttg
     9781 agcagtacgg tcataaggta atgttctaat ttccccgtaa agcggcaact ttattgagtt
     9841 gccgcttttt tattccgcgc ttcattctgc tacagtgttt ttaacacatt tta
//
LOCUS       DADKRT010000166         9795 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.169, whole genome shotgun sequence.
ACCESSION   DADKRT010000166 DADKRT010000000
VERSION     DADKRT010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9795
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.169"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            124..744
                     /locus_tag="JQ356_003404"
     CDS             124..744
                     /locus_tag="JQ356_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY4623389.1"
                     /translation="MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTES
                     GLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
     gene            1053..2465
                     /gene="cycA"
                     /locus_tag="JQ356_003405"
                     /gene_synonym="dagA"
     CDS             1053..2465
                     /gene="cycA"
                     /locus_tag="JQ356_003405"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HAY4623390.1"
                     /translation="MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFLG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEM
                     EFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGF
                     QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWF
                     IALGLGWLFIGKKRAAELRK"
     gene            complement(2510..3172)
                     /gene="ytfE"
                     /locus_tag="JQ356_003406"
     CDS             complement(2510..3172)
                     /gene="ytfE"
                     /locus_tag="JQ356_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HAY4623391.1"
                     /translation="MAYRDQPLGELALSIPRASALFRKYNMDYCCGGKQTLARAAARK
                     ELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVE
                     RVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEH
                     DEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALA
                     GE"
     gene            complement(3280..4245)
                     /locus_tag="JQ356_003407"
     CDS             complement(3280..4245)
                     /locus_tag="JQ356_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY4623392.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLI
                     ALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLP
                     VVIPVFANLLYSQRDGKLAWGKLAPALVCIGIGLACVNIAELNHGLPDFDWARYTSGI
                     VLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQ
                     TPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGL
                     LYTFLIRQQMPPLMTLSGIALLVVGVVIVVRAKPEKPLTESVSES"
     gene            complement(4353..5213)
                     /gene="qorB"
                     /locus_tag="JQ356_003408"
     CDS             complement(4353..5213)
                     /gene="qorB"
                     /locus_tag="JQ356_003408"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HAY4623393.1"
                     /translation="MIAITGATGQLGHYIIESLMKTVPASQIVAIVRNPAKAQALAAQ
                     GITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYT
                     SLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA
                     AGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVT
                     YQNLSEADFAAALKSVGLPDGLADMLTDSDVGASKGGLFDNSKTLSKLIGRPTTTLAE
                     SVSHLFNVNN"
     gene            5302..5682
                     /locus_tag="JQ356_003409"
     CDS             5302..5682
                     /locus_tag="JQ356_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY4623394.1"
                     /translation="MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREG
                     THRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEK
                     VAALADWIELNLPEVLAVRDERAA"
     gene            complement(5811..7754)
                     /gene="cpdB"
                     /locus_tag="JQ356_003410"
     CDS             complement(5811..7754)
                     /gene="cpdB"
                     /locus_tag="JQ356_003410"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HAY4623395.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDVHPVYK
                     ALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
                     EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGAD
                     VVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEEADIT
                     KGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAED
                     SKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKAS
                     GKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYD
                     GECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDRHIAFASPDE
                     NRSVLTAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKG
                     QYPMNKVATDDIGFAIYQVDLSK"
     gene            7944..8684
                     /gene="cysQ"
                     /locus_tag="JQ356_003411"
     CDS             7944..8684
                     /gene="cysQ"
                     /locus_tag="JQ356_003411"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HAY4623396.1"
                     /translation="MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAA
                     HTVIMDGLRTLTPDIPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHAD
                     AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGA
                     HVHDWQGKPLDYTPRESFLNPGFRVSIY"
     gene            8896..>9795
                     /locus_tag="JQ356_003412"
     CDS             8896..>9795
                     /locus_tag="JQ356_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623397.1"
                     /translation="MLPRIRHNNFIGAVGLFVKSSHTKTHSNNFFNNIQHAFKKKDWV
                     SNYDSLLTLWEFFRCATQIDKDSYQVLSSKNETVKAMDKFLISFSLKDNGAEYTMTLR
                     GSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQ
                     AIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLG
                     FALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAVDS
                     DITEEEICEKYKSTIEAFKKEQLA"
BASE COUNT         2391 a         2361 c         2506 g         2537 t
ORIGIN      
        1 acgggatatt gctattgttt ctttttcccc gggatttgtc atcattcctg tgacaaagtt
       61 ttacccaaag aagtgtggct gatatgctgc ccgctacttt tataccctaa gaaaggaaat
      121 acgatgacca ccccaacttt tgacactatc gaagcgcaag caagctacgg cattggtttg
      181 caggtagggc aacaactgag tgaatctggc ctggaagggc tgctgccaga agcactggtt
      241 gcaggtattg ccgatgcgct ggaaggcaaa catccggctg ttccggttga tgtggtgcat
      301 cgcgcgctgc gtgaaatcca cgaacgcgcc gatgccgttc gtcgtcagcg tttccaggcg
      361 atggctgctg aaggtgtgaa atacctggaa gaaaacgcca aaaaagaagg tgtgaatagc
      421 accgaatctg gcctgcaatt ccgcgtgatc aaccagggtg aaggcgcaat tccggcacgt
      481 accgaccgcg ttcgtgttca ttacaccggt aaactgatcg acggcaccgt gtttgacagc
      541 tccgttgctc gtggtgaacc cgctgaattc ccggttaacg gcgtgatccc tggctggatt
      601 gaagcactga ctctgatgcc ggtaggttct aaatgggaac tgactatccc gcaggaactg
      661 gcatatggcg agcgcggcgc aggtgcatcc atccctccgt tcagcaccct ggtgtttgaa
      721 gtcgaactgc tggaaatcct ctaagcagcg cattctgttc ccctcgaacc agaggggagc
      781 aggcattcag caataaaccc ttcagtttgc caaacggcgc tattttgtgt tgcaaagacc
      841 ccgtaagcgt gtatttttgt gagatgtttc gcgttatcac cgtgatatga cactcacttt
      901 aaacataaaa ttaacattag atctaaatct tagtattcat cccgcgtatt gttacctaat
      961 atcgatgagt cccgatacag attcgtcgta tcatagactg actaaaggcc gtagagcctg
     1021 aacaacacag acaggtacag gaagaaaaaa acatggtaga tcaggtaaaa gtcgttgccg
     1081 atgatcaggc tccggctgaa cagtcgctac ggcgcaatct cacaaaccga catattcagc
     1141 ttattgccat tggcggtgcc attggtacgg ggttgtttct ggggtctggc aaaacgatta
     1201 gccttgccgg gccgtcgatc attttcgttt atatgatcat tggttttatg ctctttttcg
     1261 tgatgcgggc aatgggggaa ttgctgcttt cgaatctgga atacaaatct tttagtgact
     1321 tcgcttccga tttactcggg ccgtgggcag gatatttcac tggctggact tactggttct
     1381 gctgggttgt aaccggtatg gcagacgtgg tggcgatcac ggcttatgct cagttctggt
     1441 tccccgatct ctccgactgg gtcgcctcgc tggcggtgat agtgctgctg ctgacgctca
     1501 accttgccac cgtgaaaatg ttcggtgaga tggagttctg gtttgcgatg atcaaaatcg
     1561 tcgccatcgt gtcgctgatt gtcgtcggcc tggtcatggt ggcgatgcac tttcagtcac
     1621 cgactggtgt ggaagcgtca ttcgcgcatt tgtggaatga cggcggctgg ttcccgaaag
     1681 gtttaagtgg cttctttgcc ggattccaga tagcggtttt cgctttcgtg gggattgagc
     1741 tggtaggtac aacagctgcg gaaaccaaag atccggagaa atcactgcca cgcgcgatta
     1801 actccattcc gatccgtatc attatgttct acgtcttcgc gctgattgtg attatgtccg
     1861 tgacaccgtg gagttcggta gtcccggaga aaagcccgtt cgttgagctg tttgtgttgg
     1921 taggtttgcc tgcggctgcc agcgtgatca actttgtggt gctgacctct gcggcgtctt
     1981 ccgctaacag cggcgtcttc tctaccagcc gtatgctgtt tggtctggcg caggaaggtg
     2041 tggcaccgaa agcgttcgct aaactttcta agcgcgcagt accagcgaaa gggctgacct
     2101 tctcctgcat ctgcctgctc ggtggcgtgg tgatgctgta tgtgaatcct agcgtgattg
     2161 gtgcgttcac gatgattaca accgtttccg cgattctgtt tatgttcgtc tggacgatta
     2221 tcctttgctc gtacctggtg taccgcaaac agcgtcctca tctgcatgag aagtcgatct
     2281 acaagatgcc gctcggcaag ctgatgtgct gggtatgtat ggcgttcttt gtgttcgtgg
     2341 tcgtgttgct gacactggaa gatgacactc gccaggcgct gctggttacc ccgctgtggt
     2401 ttatcgcact ggggctgggc tggttgttta ttggtaagaa gcgggctgct gaactgcgga
     2461 aataaccgca ttatcatgct ggatggcgca atgccatcca gcttttagat cactcacccg
     2521 ccagcgcgcg tgggaacagt acattgtttt ccagactgat gtgatccatc aggtcatcaa
     2581 tcagttcatt aatgccgtta tacatcgctt tccaggtggt gcaggcttct ggcggcggtg
     2641 tgacgttatt ggtagtgtgt ttgatcactt ccagcagttc gcccgcttca tcgtgctcgc
     2701 tttccattac gctgattggc cccattgcct ggctgcccat gccttgtttg atcatcggga
     2761 agaggatctg ctcttctttc atcatgtggc tggaaagctc ttcatgcagc atggtcaggt
     2821 attttgtcag cccttttggc acgctcggtt tgtcggcgtg aacgcgctcg actttagtcg
     2881 cttgcaggat cagctccggc agttgctcgc ggtgacgatc gtggtagcgc acgatgatat
     2941 ggtcaatgat ttctgccagc ggggcgctac gccagtcttt ctcaatcggt tgttcagcaa
     3001 gctttgccag ttcagcttca atgacctcaa catccagttc tttacgtgcc gccgcgcgcg
     3061 ccagcgtctg cttaccgcca cagcagtaat ccatattata tttacgaaac agagctgaag
     3121 cgcgaggaat agagagcgcc agttcaccta aaggttggtc gcgataagcc atagctgata
     3181 cctcattctt aataagataa gatgtatttt aaatacatct ttaaggcaaa agctataacc
     3241 cttacgtagc agaggcttat ttaactcaca gccagtatgt caactttctg agacagattc
     3301 agttaaaggc ttttccggtt ttgctctgac tacaatgacc acgccaacca ctaacagcgc
     3361 gataccgctc agcgtcatca gcggcggcat ttgctggcgt atcaaaaagg tgtacagcaa
     3421 acctgccagt gtttcgaaaa cgatcagcgg cccgagaatc actgtcggta atcgctggct
     3481 ggcgacgttc cagcagagtg cgccaaccca tgagcaaagc acggctatcg caaccatcag
     3541 actaataaac accagcggac gggggccaaa aggtagggag aagtccggcg tttgcgtatt
     3601 cagccagtaa caggcgacga gatagccgat gagagaaacc ggcagtgtga ccagcgcctg
     3661 cgccgtcgcc cacatcatcg gatgtttgtc gggattctcc cgcagccagc gggcgttgcg
     3721 cagggcatac catgcccagc agaccacgga aactaacgct agcacgatgc ctgaggtata
     3781 acgtgcccag tcaaaatcgg ggagtccgtg gtttaactca gcaatattca cacacgccag
     3841 gccgatgcca atacaaacca gtgccggggc gagttttccc cacgcgagtt tgccgtcgcg
     3901 ctggctataa agcagattgg caaaaacggg aatcaccacc ggcagggtgc cgataatcat
     3961 cgtggaaaca ggcgcaccag tacgttgaat ggcactggca aggcagaagt aatagatgag
     4021 gttgcccatc atagtgagca tcaaggcggt aagccagtcg cgacgcgcca actgacgcag
     4081 acgcacgcgt cccagccagg caatgggcag cgcaattaac cctaacgcca gataacgccc
     4141 catcgactgc aacatcgccg ggtattccgg tacgatcaac ggcccgacaa aaataagccc
     4201 ccacatcaac cctgctaaca gggcgtacag cacgccgcta atcattactg gcatccattg
     4261 gtctgtcaga agaaagttca ggaagcagac atgattgctc ccggcatccc gtcattatta
     4321 gagaggatgc gggaggatgc cactttaatt aactagttat taacattaaa aagatggctt
     4381 acgctttcgg ctaacgttgt cgttgggcgg ccaatcaatt tgctaagcgt tttgctgtta
     4441 tcaaacagac cacctttcga tgcgccaacg tcagaatccg tcagcatatc cgccagtccg
     4501 tcgggcagtc cgacgctttt cagtgccgcg gcgaaatcgg cttcgctcag attttgatag
     4561 gtaacctgtt tgccgctctg tttggtcagc tctgccgcta actgtgtcaa cgtccaggca
     4621 ctatcgcccg ccagttcgta aaccttgcct tcgtgaccgg cttcgctaat cacgcgtgcc
     4681 gcagctgccg cataatctgc ccgcgttgct gaggcgattt tgccatcgcc cgccgcaccg
     4741 ataaatacgc cgtgttccag tgctgccggg gcgctggcga ggtagttttc gctgtaccag
     4801 ccgttgcgca gcagggtgta aacgatgcca gaatcagcca acattttctc cgtctcaatg
     4861 tgctcatcgg cgaggccgag cggggaggta tctgcatgta gcaggctggt ataagcgata
     4921 aatttcacgc cagccgcctt tgcggcatta ataacattac gatgctgcgg ggcacgttga
     4981 cccacttcgc tggaagagat cagcagtagt ttttccactc cctgaagtgc agatgtcagt
     5041 gcggcttcat cgccgtagtc agcctgacgc acggtaatgc cttgtgctgc cagagcctgg
     5101 gcttttgccg gattacgaac gatagccact atttggctgg caggaaccgt tttcatcaag
     5161 gattcaataa tatagtgacc aagttggcca gtggcaccag taatagcgat catgggaagt
     5221 ctccatcgtt ttgtcttgtg tttaaatacg ctaacaccta aacttacttt tagtaagtac
     5281 gtacaaaaag gtaagtatga aatgagtcag gttagcctgt cgcaacaact gaaagagggt
     5341 aatctctttg cggaacagtg cccgtcgcgc gaggtgttga aacacgtcac cagccgttgg
     5401 ggggtgttga ttctggtggc gctacgcgaa ggtactcatc gctttagcga cctgcggcgc
     5461 aaaatcggcg gggtgagcga aaagatgctt gcgcagtcgt tacaggcgtt agaacaggat
     5521 ggttttctta accgtatcgc gtatccggtg gtgccaccgc atgtggaata tagcctcacg
     5581 ccgttgggcg agcaggtgag cgaaaaggtt gctgcactgg cggactggat tgagttgaat
     5641 ttgcccgagg tgttggcggt gcgggatgaa cgtgcggcat aactgccgga tgcgctgagc
     5701 ttatctggtc tacggtgcat ggctggtagg gcggataaga tgcgccagca tcgcatccgc
     5761 caataaatgc cggatgcggt tgataattta tagaccgaaa aagaagtgtt ttacttactc
     5821 aaatccacct gataaatcgc aaacccgata tcatcggtcg cgactttatt catcggatat
     5881 tgccctttct ctttaataaa cgctgcggct ttatctgacg gggaagtttc gaaacggata
     5941 tccagtttct tatcgccagc tatcggtgct aaacgccagt tgttatctgc cgccgggtga
     6001 atttctcccg cacgtttcga ctcatcagca atccacgctg tcagcaccga gcggttctca
     6061 tccggtgaag caaaagcgat atgtctgtcg cccgtaccgg caaatttgcc gccgtaagcg
     6121 cgatagttat tggtggcaac gaggaacata gcgttcggat caatcggctt gccattaaag
     6181 gtcaggttct taatccgctc tgcattggca ttaatcatct ggcactcgcc gtcatagcgg
     6241 gcgggttggg taacatcaat ctgataattc acaccatcaa taacatcaaa gttataagtg
     6301 cggaaaccat cccagttgat gagtgactgt ggtttcgtgc tgttaggatc aatctggtta
     6361 aactgtccgg cggagcactc cagccactct ttcacctctt taccgctggc tttcactaca
     6421 atcagcgtat tggggtagag ataaagatcg gcggcattac ggaaggtcaa ctggcctttt
     6481 tccacctcca catagcttgc cgggtcattt ttgcgaccac caactttaaa cggtgcggca
     6541 gctgaaagca ccggcagttt tgccagatcc ggatcgccct gaatgtaatg ttcgacatac
     6601 gctttttgcg cgttgttcac gacttgcacg gtcggatcgt cctgcaccag cgccagatag
     6661 ctatacatat tgtcggcaga tttaccgatt ggcttgctga cgaactggcg tgtggcatcg
     6721 tgatcggctt tgagtgtttc taccagcttg ctgtcttccg ccgcgaggga ttttttattg
     6781 gcgatgtcgt aaatcggccg tgcttccgct ttcgcctgcg tcacctgcca tttaccgctg
     6841 tcattactga gttgtaagtc gaccacccca agatgatcgc cccacatgcc cggcattacc
     6901 gccggaacac cattcagcgt gcctttggtg atatcagcct cttcgatatc agcaaaatct
     6961 ttacccggga aaacggcgtg agcatggcca aacataatgg cgttaacgcc cggaatttca
     7021 ctgaggtaat aaactgagtt ttccgccatt actttatacg gatcggcaga cagcccggaa
     7081 tgcgccagaa cgacaacgac atcggcacct ttctcgcgca tttcaggcac gtatttgcgc
     7141 acggtttcgg taatatcatt caccgtcact tttccggata aattagcttt atcccagccc
     7201 atgatttgcg gcggcacgac gccaatatag ccaatcttca gcgtctgttt ttttccgtct
     7261 ttatcgacca cttcggtatc tttaattaaa tacggtgtaa acattggctg tttggttctg
     7321 gcgtcaatga cgttggcatt tacataaggg aatttcgctc ccgccagcgc atttttcagg
     7381 taatccagac cgtagttaaa ttcatgattg ccgagtgtac cgaccgtata atccagcgta
     7441 ttcagcgcct tataaaccgg atgaacatca cctgctttta atcctttcgc cgacatgtaa
     7501 tcggccagcg gactcccctg aatcaaatcg ccgttatcga ccagtacgct gtttttcact
     7561 tcattgcggg catcgttaat caggcttgcc gtacgtacca gtccgaattt ttccgtggcg
     7621 gtgtctttgt aataatcgaa atccatcatg ttgctatgca gatcagtggt ttccatgata
     7681 cgcagatcga ccgtcgctgc attcacactg gcggcaatca gcgtggccag gagcgttgcg
     7741 ctaaacttaa tcatcaggga catcctttta tcatcgggaa tacgaaagaa aagggagaat
     7801 aaacgtctta cttatagaac agtgaagaat gccacaattt tacgctttga aaatgatgac
     7861 actatcacag ttggcgcatt cattaacgat agggtataag taaaacaata agttaacacc
     7921 gctcacagag acgaggtgga gaaatgttag atcaagtatg ccagcttgca cggaatgcag
     7981 gcgatgccat tatgcaggtc tacgacggga cgaaaccgat ggacgtcgtc agcaaagcgg
     8041 acaattctcc ggtaacggca gcggatattg ccgcacacac cgttatcatg gacggtttac
     8101 gtacgctgac accggatatt ccggtccttt ctgaagaaga tcctcccggt tgggaagtcc
     8161 gtcagcactg gcagcgttac tggctggtag acccgctgga tggtactaaa gagtttatta
     8221 aacgcaatgg cgaattcacc gttaacattg cgctcattga ccatggcaaa ccgattttag
     8281 gtgtggtgta tgcgccggta atgaacgtaa tgtacagcgc ggcagaaggc aaggcctgga
     8341 aagaagagtg cggtgtgcgc aagcagattc aggtccgcga tgcgcgcccg ccgctggtgg
     8401 ttatcagccg ttcccatgca gatgcggagc tgaaagagta tctgcaacag cttggcgaac
     8461 atcagaccac gtccatcggc tcttcgctga aattctgcct ggtggcggaa ggacaggcgc
     8521 agctgtaccc gcgcttcgga ccaacgaata tttgggacac cgccgctgga catgctgtgg
     8581 ccgcagctgc cggagcgcac gttcacgact ggcagggtaa accgctggat tacactccgc
     8641 gcgagtcgtt cctgaatcct gggttcagag tgtctattta ctaaattcag atggcagaaa
     8701 cagtgtattt cctgattctg ccatcctgat ttctcccaac ctaaaaagtt ataaataaaa
     8761 agagattgta tttaaagtgc aaaaattcaa ttgctaataa gttacatttt aataatgagc
     8821 gttttttgat agtttacttc tataatgaga tatttaatgg cgacataaaa taaccaaata
     8881 aaataaggta gccatatgtt acccaggatc agacacaata attttattgg tgcggtgggg
     8941 ttattcgtaa aatcatcgca tacaaaaaca cattcaaaca atttttttaa taatattcag
     9001 catgcattta agaaaaaaga ttgggtttcg aattatgata gcctgttaac tttgtgggag
     9061 ttttttcgtt gcgcaactca gattgataaa gatagttatc aagtgctttc atcaaaaaat
     9121 gaaactgtta aagccatgga taagtttctt atcagtttca gccttaaaga taacggtgcc
     9181 gaatatacaa tgacattgcg aggcagtgga tttgaatacg aagaaatccc cataacaata
     9241 aatgagtata actcattcat ggatttcaaa aaccgtgaat ttccgttaga acaaaacaga
     9301 agattgtatg cttgggatat tctgcagaaa aaacagtctg acataccgaa aaggattaaa
     9361 ggttatattc accaggcgat tggtgacgtg tctttaggtt atgccttatt ggaggatata
     9421 gtaagcaaat taaaacgggg taaatttgaa ctccaaatac caggaggtgg aattaaagaa
     9481 tgcgatggat ggtatattta cgaaaaaata attgatgata attttgccat agtcatagaa
     9541 tctttgggct ttgcgcttaa aatctatgga ggggatgaac gttttcgtaa tggttcctct
     9601 gttgttttgg aggatgaaga ttactctctt atttataatt ttctggttaa tgcaggttgc
     9661 caacaagtcg aattagccga acaagtggat gcgatagtaa gtgcgaatct ggccgtagat
     9721 agtgatatta ccgaagagga gatttgcgag aaatataaat caaccattga ggcgtttaaa
     9781 aaagagcaac tagcg
//
LOCUS       DADKRT010000167         9765 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.170, whole genome shotgun sequence.
ACCESSION   DADKRT010000167 DADKRT010000000
VERSION     DADKRT010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9765
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.170"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(188..529)
                     /locus_tag="JQ356_003413"
     CDS             complement(188..529)
                     /locus_tag="JQ356_003413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY4623398.1"
                     /translation="MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGA
                     VPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVEGLKL
                     IESGDWLDRDK"
     gene            complement(532..4302)
                     /gene="tamB"
                     /locus_tag="JQ356_003414"
     CDS             complement(532..4302)
                     /gene="tamB"
                     /locus_tag="JQ356_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HAY4623399.1"
                     /translation="MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVP
                     GLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQ
                     VNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSG
                     LNWQEKTLTLKPTSLKGLLIALPKVAQEEVVEPKIENPQPDEKPLGETLKDLFSRPVL
                     PEMTDLHLPLNLNIEEFKGEQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDSNQG
                     IVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGPVDM
                     DLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMRTAV
                     KGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTLNGI
                     NTAKEFPEWPSKLNGLIKTSGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGNSYM
                     QWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKVRGT
                     VEAPQLLADITARGLRWQELSVTQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNINLV
                     TLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTLVGPWSLT
                     RDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDFAMLKPFM
                     PETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTLNLT
                     AELRNNRAELGWTIRLTNNGQFDGQVLVTDPQGRRNLGGNVNIRNFNLAMINPIFTRG
                     EKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMRSTL
                     AGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFEATP
                     NLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNLIVH
                     VGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGELLF
                     SGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSYLLR
                     GQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQVVVS
                     GYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            complement(4299..6032)
                     /gene="tamA"
                     /locus_tag="JQ356_003415"
     CDS             complement(4299..6032)
                     /gene="tamA"
                     /locus_tag="JQ356_003415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HAY4623400.1"
                     /translation="MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLS
                     TIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGV
                     PVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFD
                     SEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEY
                     ESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYST
                     DVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMI
                     SRTRSCGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGT
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHG
                     LQFYIGLGPEL"
     gene            6238..6876
                     /gene="msrA"
                     /locus_tag="JQ356_003416"
     CDS             6238..6876
                     /gene="msrA"
                     /locus_tag="JQ356_003416"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HAY4623401.1"
                     /translation="MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNEPDGME
                     IAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD
                     PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAA
                     MLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA"
     gene            7199..8542
                     /locus_tag="JQ356_003417"
     CDS             7199..8542
                     /locus_tag="JQ356_003417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY4623402.1"
                     /translation="MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINA
                     QRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSF
                     ILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANM
                     IFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTP
                     RENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA"
     gene            complement(8604..8810)
                     /locus_tag="JQ356_003418"
     CDS             complement(8604..8810)
                     /locus_tag="JQ356_003418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HAY4623403.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
                     KDKLHLSVMSEVNRQVMRLQTEMA"
     gene            9135..9689
                     /locus_tag="JQ356_003419"
     CDS             9135..9689
                     /locus_tag="JQ356_003419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HAY4623404.1"
                     /translation="MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDK
                     DQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
                     WAKDGALTQEEVQQVMDLLQKLLK"
BASE COUNT         2256 a         2672 c         2404 g         2433 t
ORIGIN      
        1 tactcaccgt tcaaagcgtg cccccgtttt acccctgcac atttgtgaac gccagcagag
       61 ttttttatgc gattgcagat atggaaagcg gctcggagag aaaagcaaaa gatggaaaag
      121 ttacaaaaaa aaatcgcgag atacatcgca taaaacaacg ccacccgaag gtggcgtgct
      181 tttattatta cttatccctg tctaaccagt cgccgctttc aattagcttt aatccctcga
      241 cgggtcgttg ataaacgtac atccatgcac tcccatacgg cgtctgaatc aactggcgcg
      301 cgtattcacc gcccctggtg cgcaaggcat caagttcggc cagcgtggcg ttgtcaatac
      361 gataaacttc accgtgtacc gttccgttcc ccggaactgc gcctggatag tggcctaggc
      421 tatacaactg gtagttatcg atactgaaat cgcccagtaa ctgggcattg gtcatccagt
      481 gactgttgcc ttgtttgtgg cgtaaactgc cgtagacaaa tattcgcatt gctaaaactc
      541 gaactgatag agcaaatcca gtgcctggtc tacaccagac acggcttcca gatatagctt
      601 aggcatcagg cgataacgta acgtgagtgt tgctatagag tcaaatatac ccacgccgta
      661 tttcacttgc aggcctggca atacatagcc gctgaccact acctgggagg agtcgcctac
      721 tccctgggtg tcgagcgcta aattgcttac gccaaacgtc tcgccgattt tacccacaat
      781 ctggccactt tgcgcaaccc ccagaccaat cagcatcgag gtcattgccg cactgtcgct
      841 ctgatcgctc tccagccctt gtccacgtag caaataagac aatgcagctt gttgcgacat
      901 cgccgggtca gagaagatct ccgctttcgg ttcgtccgcc agaccagtga cgcgaactcc
      961 ggcgattacg tcgtcttctg tagcatccgg gttacgaata gcttcaatat taagatacgg
     1021 ttgatctggc ggaccagaga acagtagctc acccttacgc acaatcagat cctgaccata
     1081 ggcatggaag cgcccttcag ggatgttgat ctgcccgttc aggcccagcc cttgtttgtc
     1141 ctgaacgacg ttaagatcgc ccgtcagccg cgctttcagg ccaaaggcgt caatgcgcac
     1201 attgttgcca acgtggacaa tcaggttact gttaatcgga atcgacgccg ttttcggctc
     1261 ttccggttgc aggttatcgt taagcatcac cacatcgctg gagacgccta ctgcgctttc
     1321 cggcagatcg tgcaccacga tgcgcgccca cgggacatcc acgcgaccat cgagggtaaa
     1381 caggtttggt gtagcctcga atacaacatc tggcgataca tccattcgta ccatcggcgg
     1441 cacggtgatc cgcactttac tgcctttcgc cgttactcgt gcccgccagt tttcaatttg
     1501 gctccagtcg gcatcaccgt tcaggtagat ttcaccctgc tgggtccgta ctgtaccggc
     1561 aagcgtcgag cgcataccgt taaagttgac cgcaagctgg ctcggctgca tatcaaacgg
     1621 cataaagttg ccgtcgatat ccacacccgt aacctgaagc tgaccaaaca actgcgggct
     1681 ttgcacatca ccacccagac gcaagttggc actcaccatc cccgctgctt tttccccacg
     1741 agtaaagatg gggtttatca tcgcaaggtt gaagttacgg atattgacgt tgccaccaag
     1801 attacggcgg ccttgcggat cggtcaccag cacctgtcca tcaaactggc cgttattggt
     1861 caggcggatg gtccagccca attcggcacg gttgttacgc aattccgccg tcagattcag
     1921 tgtctgaaac gccaccggca gcgccgcatc gttgacggtt tgcgttacct gcacgttacg
     1981 ccccgaaagg gtgatactgc cctgcggcag cccctctttc gtggtgtccc aggcaacatc
     2041 cgctttaccc gtgaagatac cgctggcctg agtggtttct ggcataaacg gtttcagcat
     2101 ggcgaagtcg aagcggttga gattcaccac cgcacgccct tcggcccccg catcgatagt
     2161 ttgcggcacg cacagttccg cattcgggtt aagccagcag tgtggcccga tgctgatttt
     2221 ttgctcctta ttgcggtaat ccagcgcaat atcgcgggtc agcgaccacg ggccgaccag
     2281 cgtctggaag cgggtattgc taagagttcc cttccagcgt tcttctttgc gatcaaaact
     2341 tcctgccaga ttaagctgcc cggagacagg ctcgccctga atccgcaact gtagctcgtg
     2401 ctgcttttcg ctgcctttgg cattcagggt gacgaggttg atatttacat ccggctgcga
     2461 aatttgctca acgcgtacgt cgagtttccc ggcgatctga tcggtggatt taatgtcgcc
     2521 ttccacgcga acctgcgtca cggaaagttc ctgccagcgc aggccgcgcg cggtgatatc
     2581 tgccagtagt tgtggcgctt ccaccgtgcc gcgtactttc accagccctt tcgctgtacc
     2641 gccaagcccc ggcagcgcgt tatccagccc cggcgcgttg atggtggcat caagattgag
     2701 atcttttacc cccagctcgc ctttcacttc ggcactgttt ggccccagtt ccagatgaag
     2761 cccagggatc atccactgca tataactgtt gcctttcagc gtgccgtcaa cgttcacttt
     2821 gttctgtttg acgttaccgg tcagcttcag ttctggcacc tccatctgcc aggtgccgcc
     2881 gtacaggcta ccgctggttt taatcaagcc attgagtttc gacggccact ccgggaactc
     2941 tttggcggtg ttaatgccat taagcgttag ctcaccgcgc caactaatgg cctgctgcca
     3001 gtcgagcaac gccttgagtt cagttttccc ttccagcgcc gcgacggtga gtttgtcgag
     3061 attgacctgc tgttcattac ctttggcatc aagggtaatg gtggctggcg ggatctcctg
     3121 tcccttcact gccgtacgca tagagagcgt gtaatcggtc attttgccgg taagtttcag
     3181 tttcagatca tccgcctgat actgcttctc accagtgaac ggccagtaaa gctgtttgct
     3241 gttcacttcc acgttgagcg gcaatccggc ttccgccagt cgcgtctggg cgcgtaaatc
     3301 catatccacc ggaccggaaa gattaacgcc aatctccagc tgttcgcgca gcgcgccgcc
     3361 cacttttagc ttcacttttt cacctttcaa cggctccacg ttcagtgtgc tgttgagggt
     3421 gatatccacc ggccagttgt ctgacagctg cgccgtgccg ctggcgttga cgatcccctg
     3481 gttggaatcg atatccaggg cgtccagttt agtattgccg tcaatgctgc tcactttcag
     3541 cagcatggtg cgcacggtga tgtccgtgtc gcccgtcacg cgtaactgct cgcctttaaa
     3601 ctcttcaatg ttcaggttaa gcggcaaatg caagtcggtc atttccggca ataccgggcg
     3661 agaaaagaga tctttcagcg tttcgccgag cggcttttca tccggctgcg gattttcaat
     3721 tttcggttcg accacttctt cctgcgccac tttcggcaga gcaatcagca ggcctttcag
     3781 cgacgtcggt ttcagggtca gggttttctc ctgccagttc aggccggagg tgaagtccat
     3841 caccgacacc gtggtgtcat caatcttgat gttgacgttg tccagcgcca cccgtgtcag
     3901 ggtgatggga tacggcgtgg agagatccag cggaccgcta tcttcctctt cttcaacctg
     3961 ttcagaagga ggcatttttt tactgtcgat gttgacctga atgtctttca gcgccaggtc
     4021 attaatacaa acgctactgt tccacaggca ctcaagaccg accgccagat gcagattacc
     4081 cgcttttacc gccacgcctg gctgctcata acgaacgtca gacaaggtga gatcgcgcca
     4141 gccgccggtg accttgccaa tatccagtcc tggcacccag cgatccgccg ctttaaatac
     4201 aagatgcagg ccgctggtgg tgcccaccag aaacgccacc gatcccagca acagtaagat
     4261 aacgataacc acgccgaggc tgattttttt ccataaactc ataattctgg ccccagaccg
     4321 atgtaaaact gtaacccgtg ttcgtcttta tccgcgaccg gtacggcaaa atcgagtttg
     4381 attggcccga ccggcgattc ccagcgcacg ccgaccccgg taccggtttt aaagtcgctg
     4441 cggcgaatat cgcttaccgc ttcgccacta tcgacaaaca ccgcgcccca ccattttccg
     4501 gtcacgttgt actggtattc cagcgatccg gttatcaact tcgaggcccc tttcaggtca
     4561 ccgttggcgt atttcggggc gatagatttg tatttgtagc cgcgaatact gcgatcgccc
     4621 ccggcgaaaa aacgcagatc cggcggtact ttgtcgaaat caccggtttc aatccagccc
     4681 agcgtgccgc gtgtaacgaa acgatggcga tcgtacagtg tgcggatcca gacgttctgc
     4741 gcctggaaaa cggagaaatc gacatctgag ccccaggccg tgttggagta gtcgatagag
     4801 tagcgttgcg agtcgcccca ggttggcatc aggccaccac aagaacgcgt gcggctaatc
     4861 atcaccccag gataaaacag catcgtggtg ttggtaattt caccctgagt aaagtggtcg
     4921 agactccagc gcaggttaat ggcacgctgc caaccgctgg agagatccca gtagcgagaa
     4981 gccaccagcg tagtggagtc agattcggta tcgttcaggt cagtgcgctt aaaaccgccc
     5041 tgcaccaaat aatattgttc cagtggattc ttcagcagcg gcattttata gctgaagtcg
     5101 agggtctgtt ccggcgcgga aatactggta ctggtggtca aactgtgacc gtatgagttc
     5161 atccacggct ttttccacgt cgctttcacg cgcggtccca cgtccgtaga gtaaccgacc
     5221 ccggtttcga tggtgttttc tgttcgcggc gaaaccacgc ccgtcaatgg taatactttc
     5281 gtttcgcgcg ctttatcaaa ttgtggagcc accaccaccg agttaaacca gccggtagca
     5341 gaaagtcggc ggttcagttc cgccagatct ttcgattcat actcatcgcc ctctttaaac
     5401 ggcaccagat tttgcaggta ttcatcgcgg atttgtgatc cttcaaaggt cacatgccca
     5461 aagcggtaac gttcgccact gttataatca atatcccaga aggctttatg caggccgagc
     5521 gcaatgccca gctgcgcttt ggtaaattcg ctatcgaaat aacctttacg caacgcaata
     5581 ctggttaagg actttttgaa attttcataa tcgccctggt tcagtaccgt accaatagcc
     5641 gggcgagtat cgagcaattt caaatagtct ttatcggtcc gcgcgccgcc gcgcaatacc
     5701 acatcggtgc cgccaattaa caccggcaca cctggcgtga ctttggcgat caatacctgc
     5761 cgccctttct ttggcggtgg acggagatca aattcaatgg tcggctggta ataacccagc
     5821 gctttcagac cttcacggat ggcatcatcg acgcgtgcgc gaaagcggcg gtctggcgtc
     5881 acttcatcac tttcaatcgt agaaagctgc gcacgaacgt tcttttccag ctgtcccgat
     5941 aacccctcga cctgtagacg gacgttcgcg gcgacggcag atccgcttaa gcagagtaag
     6001 cttacacagc ataactgtcg gatatagcgc acattttctc ctgaatatcc ttttttcctg
     6061 cccctggaac gccgttaaac ggcttaacaa aaatccagta atatggatta aaaagcagac
     6121 taaaccccaa atatttctta tgttttactt tagacctatt cacggtggtt attgtgtgca
     6181 aatacgcctc ttgttacaac cttaacccca atgaccgatt ttcgggagag cgacaccatg
     6241 agtttatttg ataaaaagca tctggtttcc cccgccgatg ccctgcctgg acgtaacacc
     6301 ccgatgcccg tagccacgct gcatgcggtc aacggtcact caatgaccaa tgaacctgac
     6361 ggaatggaga ttgccatttt tgcgatgggt tgtttctggg gtgtggagcg tctgttctgg
     6421 cagttacccg gcgtttacag caccgccgca ggctataccg gcggctatac gccaaatccg
     6481 acttatcggg aagtgtgctc cggtgatacg ggtcatgccg aagcggtacg cattgtttac
     6541 gatccttccg tcatcagcta tgagcagttg ctacaggtat tttgggagaa tcacgatccc
     6601 gcccagggaa tgcgtcaggg caatgaccac ggcacgcagt atcgttcagc gatttatccg
     6661 ctgaccccag aacaggatgc cgcagctcgc gccagtctgg aacgttttca ggcggcgatg
     6721 cttgccgccg atgacgatcg tcacatcacc acggaaatcg ctaacgccac accgttttat
     6781 tatgccgaag atgaccacca gcaatatctg cataaaaacc catatggtta ctgtggaatt
     6841 ggcggaattg gcgtctgtct gccgccggaa gcatagcgtt acgggtacaa atgtagtttg
     6901 ttgataaagt gctctttgtc tatgcctgat gcggcttaaa cgacttacca ggcctacaaa
     6961 atcgtccaaa ttcaatatat tgcaaggact gcgtaggcct gatcggcata gcgcatcagg
     7021 cagtattgca tttatcagca gtctgaattt taaccctctg gcgactttac agtaccttac
     7081 gctatactag ccactgaaaa ttccggttca ctttcttcga atcggctttc aatgtgtatt
     7141 tcacacaaat taatcaactt tcccttccga ggatctggcc tgaaaggtcg gataagatat
     7201 gttaaacagt attttagtca tactctgctt gatcgctgta agtgcgttct tctcgatgtc
     7261 cgagatctcg cttgccgcct cacgcaaaat caaacttaaa ctgctggctg atgaaggcaa
     7321 tataaatgcc caacgcgttc tgaatatgca ggaaaatccc ggcatgttct ttaccgtggt
     7381 ccaaatcggt ctgaacgcag tggcgattct cggcggtatc gtcggtgatg cggcattttc
     7441 tccagctttt cacagcctgt tctcccgcta tatgtcggca gagctctctg agcaactgag
     7501 ctttattctc tctttctcgt tagtgactgg catgtttatc ctgtttgcgg atttaacccc
     7561 gaaacgcatc ggtatgattg cgccagaagc ggtggctttg cgtatcatca acccgatgcg
     7621 cttctgcctg tacgtttgca ccccgctggt gtggttcttc aacggcctgg cgaacatgat
     7681 cttccgtatt ttcaaactgc caatggtacg taaagatgac atcacttctg atgacatcta
     7741 cgcggtagtg gaagccggtg cgctggcggg cgtgttacgt aaacaggaac acgagctgat
     7801 tgaaaacgtc tttgagctgg aatcccgtac cgttccgtct tcaatgacac cgcgtgaaaa
     7861 cgtgatttgg tttgatctcc acgaagatga gcaaagcctg aagaataagg tggcggaaca
     7921 tccgcactct aagttcctcg tctgtaatga agatattgac cacatcatcg gttatgtcga
     7981 ttctaaagac ctgctgaacc gcgtgctggc taaccaaagc ctggcactga acagcggcgt
     8041 acaaattcgc aacacgctga ttgtgccgga tacgttaacc ctttcagagg cgttggaaag
     8101 ttttaaaacc gcaggtgaag acttcgcggt gatcatgaac gagtacgcgc tggtggtggg
     8161 gatcatcacc ctcaacgacg tgatgaccac gctgatgggc gatctggtcg gtcaggggct
     8221 ggaagagcag attgtcgccc gtgatgagaa ctcatggctg attgacggcg gcaccccaat
     8281 tgacgacgtc atgcgcgtgc tggatattga cgagttcccg cagtcgggca actacgaaac
     8341 catcggcggc tttatgatgt ttatgctgcg taagatcccg aaacgcaccg attcggtgaa
     8401 attcgccggc tacaaatttg aagtggtgga tatcgataac taccgcatcg accagctgct
     8461 ggtgacccgg atcgacagca aggccaccgc cctttcgcca aaactgcctg acgctaaaga
     8521 taaagaagaa agcgtcgcgt aacccccaga aacatcaacg gctcctgaat caggagccgt
     8581 cttattactg catagcactt tggttaagcc atctctgttt gcagacgcat aacctgacgg
     8641 ttaacttcgg acatcactga caaatgcagc ttatccttca cttttgggat aagaatctta
     8701 cccttatcaa attcaaaagc gccaacgtcc ttgatgtata accgtccacg gaacaggatc
     8761 tttacgtact tcgccacctg aagtgggttg taccgttgga aaattttcat tgttatctcc
     8821 tgctgagtat tacgcctgtg cggtgccaca atcggcccaa ctattatgag acgcaaattt
     8881 taatgcttag tgactataga ctatccgggc aatgtttcca ccgcgtataa ctttttttac
     8941 ctaaaggtta caattattca gaattatctt tttaccgaag cgcggtcttc agtataagca
     9001 ttcatttttc atatgatttg tgcgcttgac cgcaaactgg catcacactt gcgggaaatt
     9061 cgataaatag cacatatgat taaaactcag atccaagtgg tcggatcacc tgcatatcat
     9121 aagaaggaaa caccatgacc ctacgcaaga ttctggcact cacctgcctg ctgttgccga
     9181 tgatggcttc cgcacatcag ttcgaaaccg gtcagcgagt gccgccgatt ggcattaccg
     9241 atcggggcga gttggtgctt gataaagatc agtttagcta caaaacctgg aacagcgcgc
     9301 agttagtggg aaaagtgcga gtactgcaac atattgctgg tcgcacctct gcaaaagaga
     9361 aaaacgcgac gctgattgaa gcgattaaat cagcaaagtt accgcacgat cgttaccaga
     9421 ccaccaccat tgttaacacc gacgacgcaa ttccgggttc cggcatgttt gtgcgcagca
     9481 gtctggagag taataaaaag ctttatccct ggtcgcagtt tattgtcgat agcaatggcg
     9541 tcgcgcgcgg tgcctggcag ctggatgaag aaagttccgc tgtagtggtg ctggataagg
     9601 atggtcgcgt gcaatgggcc aaagacgggg cgctcacaca ggaagaggtg cagcaagtga
     9661 tggacctgct gcaaaagttg ctcaaataat ggcaataaca taaattctgc aaaaataatt
     9721 ttcccctatc gttatctatg ggatagggga attaggtctc tgagc
//
LOCUS       DADKRT010000168         9509 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.171, whole genome shotgun sequence.
ACCESSION   DADKRT010000168 DADKRT010000000
VERSION     DADKRT010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9509
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.171"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..191
                     /locus_tag="JQ356_003420"
     CDS             <1..191
                     /locus_tag="JQ356_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623405.1"
                     /translation="AHFMMSGGNILALQKILGHHDIKMTMRYAHLAPDHLETALRFNP
                     LATLPSGDKVAAAVGITP"
     gene            complement(296..832)
                     /locus_tag="JQ356_003421"
     CDS             complement(296..832)
                     /locus_tag="JQ356_003421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY4623406.1"
                     /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
                     MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
                     MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
                     RKPLSREEILRMVERVAG"
     gene            916..2124
                     /locus_tag="JQ356_003422"
     CDS             916..2124
                     /locus_tag="JQ356_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4623407.1"
                     /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS
                     PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
                     LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
                     DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
                     TKTQTAMENS"
     gene            2124..2939
                     /gene="ybjI"
                     /locus_tag="JQ356_003423"
     CDS             2124..2939
                     /gene="ybjI"
                     /locus_tag="JQ356_003423"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase"
                     /protein_id="HAY4623408.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS
                     GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEV
                     EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
                     VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGN
                     DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ"
     gene            3025..3309
                     /locus_tag="JQ356_003424"
     CDS             3025..3309
                     /locus_tag="JQ356_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623409.1"
                     /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
                     PQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEGMVIEHQIDDHHH"
     gene            complement(3350..4580)
                     /gene="mdfA"
                     /locus_tag="JQ356_003425"
                     /pseudo
     CDS             complement(3350..4580)
                     /gene="mdfA"
                     /locus_tag="JQ356_003425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308949.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdfA"
     gene            4865..5461
                     /gene="ybjG"
                     /locus_tag="JQ356_003426"
     CDS             4865..5461
                     /gene="ybjG"
                     /locus_tag="JQ356_003426"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY4623410.1"
                     /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAV
                     LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
                     SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
                     CLSAQIIWQAMGHKLYQRLQSWYRFCFALPIRKGWVRD"
     gene            5519..6277
                     /gene="deoR"
                     /locus_tag="JQ356_003427"
     CDS             5519..6277
                     /gene="deoR"
                     /locus_tag="JQ356_003427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HAY4623411.1"
                     /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
                     HSAPVVLLGGYIVLEPHSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
                     TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
                     LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
                     RMGDLKRFDIVVSDCCPEDEYVKYAQTHRIKLMY"
     gene            complement(6324..7526)
                     /gene="dacC"
                     /locus_tag="JQ356_003428"
     CDS             complement(6324..7526)
                     /gene="dacC"
                     /locus_tag="JQ356_003428"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HAY4623412.1"
                     /translation="MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWIL
                     MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGN
                     PALRGSSVMFLKPGDQVSVADLNKDVIIQSGNDACIALADYVAGSQESFIGLMNGYAK
                     KLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQP
                     NRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK
                     LLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASY
                     TLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFH
                     QWFGSWFS"
     gene            7820..8398
                     /locus_tag="JQ356_003429"
     CDS             7820..8398
                     /locus_tag="JQ356_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY4623413.1"
                     /translation="MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDE
                     SDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLV
                     RTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNV
                     GLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS"
     gene            complement(8395..9486)
                     /locus_tag="JQ356_003430"
     CDS             complement(8395..9486)
                     /locus_tag="JQ356_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001450075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HAY4623414.1"
                     /translation="MPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLPDNHGMLIT
                     LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD
                     GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENN
                     QRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQGMAMNPWSN
                     ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYW
                     KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRI
                     RDVRTGPDGYLYVLTDESSGELLKVSPRN"
BASE COUNT         2302 a         2455 c         2346 g         2406 t
ORIGIN      
        1 cggcgcactt catgatgtcg ggtggaaaca ttctggcctt acaaaaaatt ctcggacacc
       61 acgatataaa aatgactatg cgttacgcac atctggcacc ggatcatctg gaaacggcgc
      121 tccgtttcaa tcctctggca acgctgccaa gtggcgacaa agtggcggca gcggttggca
      181 ttaccccgta ataaccacca ctgaccacca acctaactta ttgtttttaa tctaacttat
      241 tgttttcatt aacccgttta cataaatggg ttttttgtta tctaaaattt atctactacc
      301 ctgcaaccct ctcaaccatc ctcaaaatct cctcgcgcga tagcggctta cggtcggtga
      361 caaaatgcag cgtcatcccc tcaataaacg catcaagcgc gcgggcggtt ccgggttcaa
      421 accattgttc gagcgtttgc tgactgcgct gcatccagtt ttgcattacc gtttttaata
      481 gcggttttcg gctagccagc gcgtagagct ggtacatcag ctccatatta tccggcgttg
      541 caacctgtga gctgtagatc atatcggtga tagcctggca tgcgccttga gcatcactaa
      601 catcgctaaa aaatgcctga tattgccggg acataatctc agtaaaactg ctgaacgcct
      661 ccagcaacaa ctcatcaatt cctgaaaaat agtaggtcat cgatcccaac ggtaccccgg
      721 caagggtagc aattttgcgg tgcgtaacag catgtattcc gtaaagtttc accgcctcca
      781 gcgtggcctg gataattttt tctcgccgtt gcggatcgtt agcgcgacgc atgtcatttc
      841 ctctgtctgc aattgtgtac aaatgtacac aaccttgcta atgttgtctt ccctcttctt
      901 attttgacgt gatctatgac cgtaaattct tcacgtaatg cattgaaacg ccgaacctgg
      961 gcgctgttta tgttcttctt tttgccaggc ctgttaatgg cgtcctgggc aacccgtacg
     1021 cctgctatcc gcgatattct ctctgtctcg atcgctgaaa tgggcggtgt tctctttggt
     1081 ctgtcgatcg gttcgatgag cggtattctc tgctcggcgt ggttagtgaa acgctttggg
     1141 acacgtaatg tcatcctggt cacgatgtcc tgcgcattga tcgggatgat gatattaagt
     1201 ctggcactct ggctgacatc gcccctgctc tttgccgttg gtctcggcgt ctttggggca
     1261 agttttggtt ctgcggaagt ggcgataaac gttgaaggtg ccgccgttga gcgagaaatg
     1321 aataaaacgg ttttgccgat gatgcacggt ttttatagcc tgggcacgct ggcaggcgct
     1381 ggtgtcggga tggcactgac ggcctttggc gttccggcaa cggtgcacat tttattggcg
     1441 gcgctggtag gtatcgcgcc tatttatatc gccattcagg caatccctga cggtacgggc
     1501 aaaaatgctg ccgatggcac ccagcatggc gaaaaaggca ttccttttta tcgcgatatc
     1561 cagttgctgt tgattggtgt tgtagtgctg gcgatggcct ttgccgaagg ttctgccaac
     1621 gactggttac ccttattaat ggttgacggt cacggtttta gccctacttc cggctcgctg
     1681 atttatgccg gttttaccct ggggatgacc gttggacgct tcactggcgg ttggttcatc
     1741 gaccgttaca gtcgcgttgc cgtggttcgg gccagtgcac taatgggggc gttgggtatt
     1801 gggctgatta tttttgtcga tagcgcctgg gtcgctgggg tgtctgttgt actctgggga
     1861 ctgggtgcct cgctgggctt cccgctgacc atttctgccg ccagcgatac cggccccgat
     1921 gcaccaaccc gcgtcagtgt ggtagcaacg accggttatc tggctttcct cgtcgggccg
     1981 ccgctgctgg gctatctcgg cgaacattat ggattacgta gtgcaatgct ggttgtactg
     2041 gcgctggtta ttctcgcggc tattgtcgcg aaagccgtcg ccaaacccga taccaaaacg
     2101 cagacggcga tggagaatag ttgatgagca ttaaattaat tgcggtagac atggatggta
     2161 ctttcttaag cgatcaaaaa acctataacc gtgagcggtt tatggctcag tatcagcaaa
     2221 tgaaagcaca aggcattcgt tttgtggtcg ccagcgggaa tcaatattat cagttgatct
     2281 ctttcttccc tgaaattgct aatgaaattg cctttgtggc tgaaaacggc ggctgggtag
     2341 tgagtgaagg caaagatgtt tttaatggcg agctgtcgaa ggatgccttt actactgtcg
     2401 tggaacattt gctgacgcgc ccggaagtgg aaattattgc ctgcggaaaa aatagcgcct
     2461 atacgctcaa aaaatatgac gatgccatga aaacggtggc ggaaatgtat tatcaccgtc
     2521 tggaatacgt tgataacttt gacaacttag aagatatttt ctttaagttt ggcctgaatc
     2581 tttccgatga actgattcca caagtacaaa aagcattaca tgaggccatc ggcgatatta
     2641 tggtgccagt ccacaccggc aacggcagca tcgatctgat tatccccggc gtacataaag
     2701 ccaatggcct tcgccaactg cagaaattat ggggaataga cgacagcgaa gtggtggtct
     2761 ttggcgatgg cggtaacgat attgagatgc tgcgtcaggc aggctttagt tttgcaatgg
     2821 aaaatgccgg cagcgcggtc gtcgcagcgg caaaataccg ggcaggctcc aataaccgtg
     2881 aaggcgtact ggatgtgatc gataaagtgc ttaaacacga agcgccattt gaccaataaa
     2941 aacggcagca cgcccggcaa cacaatacct gaatgaaggc tgcataattc gcggaaatta
     3001 acccgctgca ttatttcagg cgaaatgatt atgaaaaatt gtctactgtt gggcgcgctt
     3061 ttaatgggct ttactggtgt ggcgatggcg caaagtgtca ccgtcgatgt gccgagtgga
     3121 tacaaagtgg ttgtagttcc tgattcagtc agcgttccac aagcggtcag cgtcgcgact
     3181 gtgccgcaaa ccgtctatgt ggctcctgcg ccagctccgg cttaccgccc gcatccttat
     3241 gctcgccatc ttgccagcgt aggtgaaggg atggttatcg aacaccagat tgacgaccat
     3301 caccattaat tcgagaatgc ctgatcgcac aaagcagtca ggcatttttt tacccttcgt
     3361 gagaatttcc catctgttta tcttttaaaa agataatcat cagcgacagc cacaaaattc
     3421 cgttgacaag gttgaagaga ttaaactgtc cgttgccccc gttcagccag gcatgtttgc
     3481 tgatttcaat accaacggta aagatcagca tttgcagcat tcccatcgcc gcagaaaccg
     3541 tacctttact catatcgctg gcaaacaggg ttaatcgcac cagtcccgca ttcgccagac
     3601 caataccgaa agcataaata cttaacccgg cagtcatcca taaatacgcg tgcgatgaga
     3661 taaccgttgc cgcagcagcg accaacagac caatcataat cggccagccg cccataatta
     3721 tcagcgaacg tacggtgcgg cacgaggtca gacgcgctaa cagcaagtta cccgcaatta
     3781 acgccccgaa aataggcact tgcagcaagc catattcata gctgctcaac tgctcgccgg
     3841 taatgatgat aatcggcgac tgggcgatcc acgccagcaa tggcaggcta acgaatccca
     3901 gcgccagcgc ccccgccaca aagcggccgt tcttcagcac cagcttatag tcacgaccga
     3961 gttctttcag tgacagtttc tcgcctatac gcgtggcggt ttcaggcata gctcgttgca
     4021 gaccgaaaaa ggagatcgct gccaatgcgg caaacaaaac aaacatcccc tcccagggca
     4081 gcacatggat ccacgccgcg cccaccagcg gaccaagtag cggagcaatc agcgccacgt
     4141 tcgccatcag cgcggtgatc ttgatacaaa ccgcctcttc gaaagattcc tgaattgcgg
     4201 cgtatcccac agcgccaatg aaacagaggc ttatgccctg caagaagcgc aacagagtga
     4261 attgttcaat gttttgcgcc agtaatattg ccagacaggt gatgataaac cacaccaccc
     4321 ccgccagcat caccggacgg cgaccaatac gatccgacag cggccccagg agccattgta
     4381 aaaacatccc gcccgccaga tatgcggtca ttgaagtagg aacccaatca atgcccgcct
     4441 gatattgttc caccacggcc aacataccgg gttgaatcat atctgccgat ataggttgaa
     4501 aattcgtaaa gcaccagaca gagagggaaa agtaacgcct gacgtccaag cctggcaccg
     4561 gaagctaatt tattttgcat gcaatttctt cgccaataat aatcgcgcag agtttaataa
     4621 aagcgcagct aacgagaaag cgaattttgt agctgaaacc acggttaagc acattcttac
     4681 attattgcga gtatagctac gctttcttta agttttattt aacctatgcc cgttacaatc
     4741 acccaccgta aacaggccgc ttgagggaaa taagacgatg ccgctttacc cagtttaacc
     4801 tgcactttat tctcaacgac ttgcctgtat tggctccctt ttaatcactt tgcgtcggga
     4861 agttatgctg gaaaatttga atctctctct attctctctt attaacgcga cgccagactc
     4921 ggctccgtgg atgatctcgt tggcgatttt tattgctaaa gatttgatta ccgtggtgcc
     4981 gctgctggcc gcggtgcttt ggttgtgggg gcttacagca caacggcaac tggtgataaa
     5041 aatcgctatc gcgctggcgg tcagcctgtt tgtgtcctgg acgatgggac atctttttcc
     5101 gcacgaccga ccctttgtcg aaaatatcgg ctataacttc ctgcatcatg cggcggatga
     5161 ctcattccca agcgaccacg gtacggtgat tttcaccttt gcactggcat ttttatgctg
     5221 gcatcgcctg tggtccggct cacttttaat ggtgctggcc gtcgtcattg cctggtcgcg
     5281 cgtttatctt ggcgtccact ggccgctgga tatgctcggt ggattgctgg caggtatgat
     5341 tggctgcctt agtgcccaga ttatctggca agcgatgggg cataaactct atcaacgtct
     5401 gcaatcgtgg tatcgcttct gttttgcatt accgatccgc aaaggctggg tgcgtgactg
     5461 atctctgcta aaaagtgtag tattgagcgg ctcgcttcaa taactattca gagggattat
     5521 ggaaacacgt cgcgaagagc gtatcgggca gctgctgcaa gaattaaaac gcagcgataa
     5581 gttacatctt aaagacgccg ccgccctgct tggggtttcg gagatgacga ttcgtcgcga
     5641 tctgaacaac cacagtgcgc ccgtcgtttt gctcggcggc tatattgttc tggaaccgca
     5701 tagtgccagc cattacctgt taagcgatca aaaatcccgc ctggtggaag aaaaacgccg
     5761 ggcggcaaaa ctggctgcga cactggtaga acccgatcag accctctttt ttgactgtgg
     5821 caccaccacg ccgtggatta ttgaagcgat tgataatgaa atccctttta ccgccgtttg
     5881 ttattcgcta aatacctttc tggcgctgaa agagaaaccc cattgccgcg catttctgtg
     5941 cggtggtgaa tttcacgcca gcaacgccat tttcaaaccc atcgattttc agcaaacgtt
     6001 gaataatttt tgcccggata tcgcttttta ttccgcggcg ggcgtgcatg tcagtaaagg
     6061 cgctacctgt tttaatcttg aagagttgcc ggtaaaacac tgggccatgt cgatggcgca
     6121 aaagcatgtg ctggttgtcg accacagtaa atttggcaag gtccgtccgg cgcgcatggg
     6181 tgacctgaaa cgctttgata ttgtggtgag tgattgttgc ccggaagatg agtatgtgaa
     6241 gtacgcgcag acgcaccgta ttaagttgat gtattaatga cgtataaccg gatgacgttt
     6301 cgcgccatcc ggttatcaga agattaagag aaccagctgc cgaaccactg atggaatttc
     6361 atcatcacga aatcccacat ccgaccaaag aatccgccct cttccacatt ttccatcacg
     6421 atcagcggac gctgctcaat ggatttaccg ttaagctgga aatcaatggt cccgacaacc
     6481 tgaccttttt tcagcggtgc ggtaagctgc ggttccgtta acgtgtagct cgccttcagg
     6541 tttttcagct gcccacgcgg tatggtcact gagcccgctt cgcctgcccc gagattcact
     6601 tcgctcttat caccaaacca gacgcgctga gtcacaaagg tggcatcagg tttaattggc
     6661 gtcacggttt caaagaagcg gaaaccccag gtcaataatt tctcagactc attaaaacgg
     6721 atacggtcag ttttcgcccc caacactacg gagattaaac gcatatcgcc ctgggtagcc
     6781 gaagcaacca gattatatcc cgcgcctgcc gtggttcctg tcttcatgcc atcaacattc
     6841 agattgctgc tccacagcag acggttacgg ttaggctgac gaattttgtt gaaggtgaac
     6901 tctttctctt tatgaatggc gtactcttcc ggcacatcgt ggatcaatgc tttacccagc
     6961 aatgccatat cgcgcgcggt actgaactgc cccggcgcat ccaggccgtg caccgtctgg
     7021 aaggtagtgt tggtcagacc cagttttttg gcataaccat tcatcagacc aataaatgac
     7081 tcctggctcc cggcaacgta atcggccagc gcaatacagg cgtcattacc ggactggata
     7141 atcacatctt tgttcaagtc tgccaccgaa acctgatcgc ccggtttgag gaacattacc
     7201 gatgaaccac gcagtgccgg atttcccgtc gcccaggcat ctttaccgac cgtcaccata
     7261 tcggtgagtt taatcttatc ggccttaagc gcctgcccaa ccacatagct ggtcatgatt
     7321 ttagtcaggc tcgcgggatc cagtttctca tccgcattgc cttctgccag cactttaccg
     7381 ctggcgtaat ccattaaaat ccatgcacgc gcatccacgc tcggcgcttc aacggtttgt
     7441 tcggccgcga atgccgttgg ggcaaaaagg aataaaaatg cagaacccgc tgcaagacca
     7501 cgaaggagag aggagtattg cgtcataaat gccacccgag tatccattca aaaaaaatac
     7561 gttatatcgc cgtatgataa gttcggtgat taataacgca cacacaaact taaagaaacc
     7621 gtaagttggt aaagttttta aagtttatgc aatatcctgc cgcttcgctg cttctggtgt
     7681 catttttttg ccagctgttg cttaaaagtt aactttactt caccatcgga gtcctgttca
     7741 gcctgtggct gcctgtcgga aaaggggtga gtatgattac gctgtggggt cggaataatt
     7801 caaccaacgt aaaaaagtat tgctgacgct cgaagaactg gaactacctt atgagcaaat
     7861 tctcgcgggc cgtgagtttg ggataaatca cgatgctgat tttctggcga tgaaccctaa
     7921 cgggctggtg ccgttgttgc gtgacgacga aagtgatctc attctttggg aatcaaacgc
     7981 cattgtccgc tatctggcgg cacagtacgg gcaaaaacgc ctgtggatcg actcaccggc
     8041 acgtcgtgcg gaagcggaaa aatggatgga ctgggcaaac cagacgctca gtaatgccca
     8101 tcgagggatc ctgatgggat tagtcagaac accaccggaa gagcgcgatc aggccgccat
     8161 tgatgccagt tgcaaagagt gcgacgccct gtttgccctg ctcgatgcgg aactggcaaa
     8221 agtaaaatgg ttctctggcg acgagtttgg tgtgggcgat atcgctatcg caccgttcat
     8281 ctacaatttg tttaacgttg gcctgacctg gacaccgcgt ccaaatctgc aacgctggta
     8341 tcagcaactc actgaacgcc ccgcagtgcg caaagtggtg atgattcccg ttagctaatt
     8401 gcgtgggcta actttaagta attccccact ggactcgtcg gtgagaacgt ataaataacc
     8461 gtcgggtcca gtgcgaacat cacgaattcg ctgccctctg tccgttaaaa tacggccatc
     8521 ttctgtcact ttgtcgccgt tgacgctcat cacaatgaca tctttatctt tcagcgcgcc
     8581 aataaataat ttttgctgcc actgggggaa tttatcgctg ttatagaagg ccatgccgct
     8641 cacagcgggc gaatctttcc agtaaaaaac aggttgctcg gtcccggcga cgatctcccc
     8701 tttcgcttcc ggtatcttaa agcctgaata gttgattccc caggttgcca gcggccagcc
     8761 gtagtttttg cctttttgcg ggatattaat ttcatcacca ccgcgcgggc catgttcatt
     8821 cagccacagt gcattactcc acggattcat cgccattcct tgcggattac gaatgccata
     8881 agaccagatc tcggcgcgcg caccggattc ctttataaaa ggattatcat ccgggatttc
     8941 gccctgatcg gtcagacgca ccagtttgcc ctgtaattta tccagatcct gcgccgtcgg
     9001 gcgctgattg ttttcgccca gagcaataaa aagataacct ttaccgtcga ataccagccg
     9061 cccgccaaaa tggttgccgg tagacagttt tggcatctgg cggaagacgg tgcggaagtc
     9121 ggtcactttt gagagatcat cacttaagcg gccataaccc acagcagttc cggctttgcc
     9181 atcatcgcca acttcggaat aacttaacca gatgcggcga gactgagcaa aatcaggcgc
     9241 taaaaccacg tccagcaggc cgccctgccc gtgcgcccaa acgtccggaa ctccggaaag
     9301 cggcgcagat aatccttttc ctgcttgcca gtgacgcaac tcgccgccgc gcagagtgat
     9361 taacataccg tgattatcgg gtaaaaaggc cagtgcccag ggatggtcga gtttgtcttg
     9421 cagtacttcg acatttaccg ttgcaggagc cgcccagaga gcggaagaaa gacaaataag
     9481 gggcacaagg aaaaaggatt gtcgatgca
//
LOCUS       DADKRT010000169         9398 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.172, whole genome shotgun sequence.
ACCESSION   DADKRT010000169 DADKRT010000000
VERSION     DADKRT010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9398
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.172"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(312..890)
                     /gene="mocA"
                     /locus_tag="JQ356_003431"
     CDS             complement(312..890)
                     /gene="mocA"
                     /locus_tag="JQ356_003431"
                     /EC_number="2.7.7.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor cytidylyltransferase"
                     /protein_id="HAY4623415.1"
                     /translation="MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCS
                     RIILVTGYRGNELHERYVNQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDM
                     PTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG
                     AHYSVEVENAEIILDIDTPDDFITVQKRYTKI"
     gene            993..1763
                     /gene="yqeC"
                     /locus_tag="JQ356_003432"
     CDS             993..1763
                     /gene="yqeC"
                     /locus_tag="JQ356_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311776.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium-dependent hydroxylase
                     accessory protein YqeC"
                     /protein_id="HAY4623416.1"
                     /translation="MKSIVDPSALFIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQA
                     SGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFT
                     PEAIDALVQRPECDVILIEADGSRAMPLKAPDEHEPCIPKSSCCVIAVMGGHILGAKV
                     STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQC
                     ENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN"
     gene            1811..3436
                     /locus_tag="JQ356_003433"
     CDS             1811..3436
                     /locus_tag="JQ356_003433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF2563 family selenium-dependent molybdenum
                     hydroxylase system protein"
                     /protein_id="HAY4623417.1"
                     /translation="MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSI
                     VGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGM
                     RPRLVLIGAGHINRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAV
                     EALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEE
                     HIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGA
                     GDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSA
                     EAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFT
                     AGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVK
                     LGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSV
                     SDKARAIGGGVLEALMMLMHQGVKATKEVLEVA"
     gene            complement(3477..4409)
                     /gene="arcC"
                     /locus_tag="JQ356_003434"
     CDS             complement(3477..4409)
                     /gene="arcC"
                     /locus_tag="JQ356_003434"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HAY4623418.1"
                     /translation="MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIV
                     THGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNVLREELLSRGI
                     NKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVV
                     ASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLA
                     EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAA
                     ASFARSRAGREALITVLSKAKEGIEGKTGTVICQ"
     gene            complement(4457..5842)
                     /locus_tag="JQ356_003435"
     CDS             complement(4457..5842)
                     /locus_tag="JQ356_003435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311773.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-phenylhydantoinase"
                     /protein_id="HAY4623419.1"
                     /translation="MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEI
                     DATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCR
                     LRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKL
                     NDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAE
                     AIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYD
                     TEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCP
                     NGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVV
                     IIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRF
                     LRRKPFVPPVL"
     gene            complement(5895..7106)
                     /locus_tag="JQ356_003436"
     CDS             complement(5895..7106)
                     /locus_tag="JQ356_003436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgeY family selenium metabolism-linked
                     hydrolase"
                     /protein_id="HAY4623420.1"
                     /translation="MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHR
                     IKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGME
                     TDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYII
                     EQSGIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPIL
                     GELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGAL
                     DEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEG
                     LFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMY
                     AAIPLSWLATE"
     gene            complement(7164..8360)
                     /gene="dpaL"
                     /locus_tag="JQ356_003437"
     CDS             complement(7164..8360)
                     /gene="dpaL"
                     /locus_tag="JQ356_003437"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HAY4623421.1"
                     /translation="MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRP
                     TPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSF
                     EHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAE
                     CIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMR
                     EMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV
                     NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRI
                     ISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEG
                     KHAVAP"
     gene            complement(8418..>9398)
                     /gene="ygeW"
                     /locus_tag="JQ356_003438"
     CDS             complement(8418..>9398)
                     /gene="ygeW"
                     /locus_tag="JQ356_003438"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HAY4623422.1"
                     /translation="TTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISF
                     CADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMAD
                     LAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGY
                     DLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRAN
                     DHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVT
                     EGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK"
BASE COUNT         2194 a         2291 c         2465 g         2448 t
ORIGIN      
        1 ttagcttata cagatatcat tgagtgaccg gtgttgagaa atccggtggt ttagggggat
       61 agagcaacaa tcgcaccact cttgccaggt ttggcgggaa atataaaaaa atgtgaggcg
      121 gctcgaaact taagggcttt ttgtgaatga actcacaggt gctaaatgag aattaaaatc
      181 actcctgaaa attattattg ccagcccata tatcactttt tctcttttct caaaatcagt
      241 gattccttat cattatgata aagagtgctg gagggattaa atatttgaac gcaatcgttt
      301 aactacgttt tttaaatttt agtatacctt ttttgcactg taataaagtc gtccggagta
      361 tcaatatcta aaattatttc tgcattttct acttcgacgg aataatgagc tcccataagg
      421 agtgcctgac gcatattggt gatattgggg cgcttgattg cctgcatcag gcatggtttt
      481 gacactaaaa tcggatggcc ggggatgcca ttatggagtg gcagtattgc gccatcattt
      541 cgtaacgacc agatttttct gaaaatatcg atggtgaggg ttggcatgtc accgtgggtg
      601 agaaaacaat gttctgtttg cactgcgggt actgcggcct ttactgatgt tagtaaaccc
      661 tgcgcataat ctgggttgtg gataatagtg atattgctct ggttcacata acgttcgtgc
      721 agttcattac cacgatagcc ggtgactaaa ataattcggc tacaaaactg caacgcattt
      781 ttgatacttg tatcaagaat tgtcccctgt tgccagggta acatcatttt ccattgcccc
      841 attcttgatg ataatccggc agcggtaatt atacagtcga tggctgacat agtggttcca
      901 ttatttatag gggctaataa cgcctgataa ttgcgttact tcctgatgga ttaagttggg
      961 gataatttat cccagagagg tcataaagac tcgtgaaaag tatagttgac ccatcggcat
     1021 tattcattga tttaggtgcg cagaaacgtc ccactgtgat ttctgttgtt ggtgctgggg
     1081 ggaaaaccag cttgcttttt tggctggcag aactgctcca ggctagcggc aggcgtgtgt
     1141 taatcacgac gacaacacat atgtttatgc caacgtctca ctggcccgtg gttttctgtc
     1201 gtgatcccgc catgcttcct catgcgtctc ttacatcccc catttcattt tgttttcaca
     1261 gctggaaagc gaaccaggga aaagtgcagg gatttacgcc agaagcgatt gatgcactgg
     1321 tgcaacgacc agagtgtgac gtaattctca ttgaagcaga tggctcgcgt gcaatgccgt
     1381 taaaagcgcc tgatgagcac gaaccttgca tacccaaaag cagttgctgc gtgattgctg
     1441 tgatgggagg acatattttg ggcgcgaaag tgagcacaga aaatgtccat cgctggtcgc
     1501 agtttgctga tattactggg ttaacacctg atgcaacctt gcaactgagc gatctcgttg
     1561 cgctggttcg ccaccctcag ggggcgttta aaaacgtacc gcaaggttgt cggcgagtct
     1621 ggttcattaa ccgtttttct caatgtgaga atgcgattgc acaaagcgag ctccttcaac
     1681 cgctgcaaca acacgacgta gaggcaatct ggctaggcga tatacaagaa catcctgcaa
     1741 tcgcgcgcag atttgtgaat tagcggcccg ggtattccgg gttactgaaa ggatatccat
     1801 tgaggttggt atgaatattt tcacagaggc tgcaaaactc gaagagcaaa attgtccgtt
     1861 tgcgatggcg caaattgttg atagccgagg ctcgactccc cgccattctg cacaaatgtt
     1921 agtgcgcgcc gatggttcta tcgtcggtac aattggtggc ggaatggttg agcggaaggt
     1981 gattgaagag tcacttcagg cattgcagga acgtaagccg cgattattcc atggacgtat
     2041 ggctcgtaac ggtgcggatg ctgtcgggtc agattgtgga ggtgcaatgt cagtatttat
     2101 cagcgtccat ggtatgcgtc cacgtctggt gttgattggc gcggggcata tcaaccgggc
     2161 gatagcccag agtgccgcgc tattaggatt tgatattgcc gttgccgata tttatcgcga
     2221 aagcctcaat cctgaactat tcccaccatc aaccacgctt ctccatgctg agtcgtttgg
     2281 tgcggcagtg gaagcactgg atattcgccc tgataatttt gtcctgattg ccacgaataa
     2341 tcaggatcgt gaagccctcg acaaactcat tgaacagccc attgcatggt tggggttgct
     2401 ggcaagtcgc cgcaaggttc agcttttcct gcgtcaattg cgtgagaaag gcgtggctga
     2461 agaacatatt gcccgtttac atgcgcccgt tggttacaac ataggtgcgg aaacgccgca
     2521 ggagatcgcc atcagcgtgc tggcagaaat attacaggtg aaaaataacg cgccgggtgg
     2581 gctgatgatg aaaccttctc atccttccgg acaccagctg gtggtgattc gcggtgcggg
     2641 agatatcgcc agtggtgtgg cgctacgtct gtatcatgcg ggttttaaag tgatcatgct
     2701 ggaagtggaa aaaccgacag tgattcgttg taccgtggcg tttgcccagg ccgtgttcga
     2761 tggcgaaatg acggtcgaag gcgtcactgc tcgcctggca accagctctg cggaagcgat
     2821 gaaacttacc gaacgcggat tcatccctgt gatggtagat cccgcctgtt cattgcttga
     2881 tgaactgaaa ccgctttgcg tggtggacgc tattctggcg aaacagaatt tgggaacgcg
     2941 ggcagatatg gcaccagtaa caatcgcgct tgggccgggc tttactgcag ggaaggattg
     3001 tcatgcggta attgaaacaa atcgcgggca ctggctcggt caggtgattt actctggttg
     3061 tgcgcaggag aataccggtg ttcctggcaa tattatgggg cataccaccc gacgggtgat
     3121 ccgtgctcct gctgcaggca ttatgcgatc caacgtgaaa ttaggcgatc tggtgaaaga
     3181 gggcgatgtg attgcctgga ttggtgagca tgaaattaaa gcaccgttga cggggatggt
     3241 gcgtggcttg ttgaacgacg gcctggcagt ggttggtggt tttaaaattg gtgatatcga
     3301 tcctcgtggt gaaaccgctg atttcaccag cgtttctgat aaagcccggg cgattggcgg
     3361 cggcgtactt gaggcgttaa tgatgttgat gcatcagggc gtgaaagcga caaaagaagt
     3421 gctggaagtg gcttaaatga aaatggccgg atggtattac ccacccggcc ttaaaattac
     3481 tgacaaatca ccgttccggt tttgccttca atcccttctt tcgctttgct caatacggta
     3541 atcagtgctt cacgacctgc gcgagagcga gcaaacgagg cggcagcttc cactttaggc
     3601 agcatagaac ctttcgcaaa atgaccttct tcgataaagc gttcagcatc acttaatgac
     3661 aggcgatcga gccactgttc attctcttta ccgaagttaa tggccacttt ttctaccgca
     3721 gtcagaatga tcagcatatc ggcatcaatc atttctgcta aacgggcgct ggcccagtct
     3781 ttatcgataa ccgcgctggc accacgcaga tggttacctt cacgaataac agggatacca
     3841 ccaccgccaa cggtgatcac cacctggcct gcatctacca gagctttaac agtttctttt
     3901 tcaatgatat caaccggttt tggcgaggca acaacacggc gatagccgcg accagcatct
     3961 tctttcagag tgtaaccctg ttttgtcagt tgctctgctt cttgctcggt aaagaacgaa
     4021 ccgatcggct tggtcgggtt gaggaatgcc ggatcgttag cgtcgacttc gacctgagta
     4081 accagcgttg ctacaggttt attaatgccc cgagaaagca gttcttctct taacacgttt
     4141 tgtagatcgt aaccaatata accctggctt aaggcaacac agacagacat cggcagcatt
     4201 ggcgagtgtg cttcagtttt tgcggcagct tcaaaggcct ggttaatcat gcccacctgc
     4261 ggcccgttac catgagtgac gataacttca tgtccttggg caattaaatc aacaattgcc
     4321 tgagaagtaa tttttaccgc tttcatttgt ccggccaggt catcgcccag cgcattcccg
     4381 cccagggcga gaacaatttt cttactcatt tttcctcact catcattctt gattgtgtat
     4441 agatccctga cagtggttag agcacgggag ggacaaacgg tttgcgtcgc aggaaacgac
     4501 ctcgcccggc tttgcctgta aaggtgccgt cacagaaaat cgtttcacca cgggataagg
     4561 ttctgacaat cgcgccctga caggtaaaac cctcccatgg cgagtagtcg gcgttgtcgt
     4621 ggagatggcg atgctgaatt tgttggctct gacgtgggtc gataatcacc acgtcgccat
     4681 cggaaccggg cgctaataat cctttttgcg gccacaggcc aaacagcctg gcgggcattg
     4741 cgctggttaa ttcaacaaag cgttccggtg ttatacgtcc cgtcatcacg ccactggaaa
     4801 acagtaactg catgcggttt tccacaccgg gtaagccatt tgggcagcga ctgaaatcgc
     4861 ctttagaaat ttgcaggcgt tgagccatcg agaaggtgca gtgatcggtc gccaccacgt
     4921 caatcgcacc atcgctgatg ccacaccaca gtttgtcctg ctcgcgtacg ttacgcagcg
     4981 gtgggctaag aatgaacttc atgccatctt ctgtatcgta actgcgttcg tccaacagga
     5041 gatattgtgg gcaggtttca acccagactg gctggtgatt cgcacgggca agacgcagat
     5101 aatccagacc taagccgtta gacaggtgca cgatatagag cggggcgtta ccggcaattt
     5161 gtgccaggtt aatcatgcgg gcgatggctt ccgcttcgca ttccagaggg cgactcaagg
     5221 catgatagcg cggcgcggtt aaccctgcgg cgataaattc cgcccgcttg ctggcgatag
     5281 ccgcatcatt ttccgggtgc acggtggtca gcgcgccgga ttcatgcaag cggcgtaatg
     5341 cctgcaaaac ctcgtcatcg ttgagtttgt attgataggt taaatagagt ttaaaactgc
     5401 tcagtccttc ctcgaccatc atcgggattt cgtcgaggat tgcgtgatta atgtgctgga
     5461 tcacaccgtg aaagctgtaa tcgatgaccg ctttatgggc ggcataacca cgataaacct
     5521 ccagttgatg gcgtaaccga cagccgtttg ggccaaatcc catatggtca ataatggttg
     5581 ttgtaccgcc acacgcagct gcgcgggtac cggtaaaaaa atcatcacaa ctgcgcgcga
     5641 tgccgacatc aatattgaaa tgcgtatgga catccacgcc gcctgggaaa acgtaacagc
     5701 cagtggcatc aatttcttca tacgggagct gcggcgaaat attgttgccc aactggcgaa
     5761 caatcccgct ttcaatcagc aaatcctgtt tggcttgtcc atctgcgtta acgacagtgc
     5821 cgtttttgat caatacgcgc atagcaaact ccaaaaaccc tccggcgaac cggaggggaa
     5881 taagtgaaga gtaattactc tgttgccagc cagcttaacg ggattgcagc gtacatcgcg
     5941 gcacaggtca ccaggtgaga tttccaggtt ttttcgttag gtgcatgcgc ttcaggttct
     6001 ttacccgggc caaagccgat caccggaatg ccgtgacggc ccatgataga tacgccgtta
     6061 gttgagaagg tccacttatc aacaaccggc gctttgccaa acagcccttc gtaggcattc
     6121 accagtgctt taacggtgaa gtgatcttct tccactttcc aggtcgggaa gtagcattcg
     6181 gttgggtaaa ccaggccagt ccaggacgga cggtcgtagt tgtacataga aacaaccgcg
     6241 ttagctttct gtactgcagg cagggcgcgg atttcgtcca gcgcgccttc ccaggtttcg
     6301 ccccaggtca gacggcggtc aatagagacg gcgcagctat ctgctacagc gcaacggctt
     6361 ggggatgtga agaagatttc agaaacggtg agggtgcctt tgccgaggaa ttcgtcataa
     6421 cccagacgtt gggagagttc ttgtaattcg ccaagaatcg gacccatttt gaaaatggcg
     6481 ttgtcaccgc gttctggcgc agaaccgtgg cagctaacac cctgaacatc aatacgaatt
     6541 tccatacgac cgcgctgacc acggtatatc tggcagtcgg ttggttcggt actgaccaca
     6601 aattccgggc gaatgccgga ttgttcaata atgtactgcc agcacagacc gtcgcagtct
     6661 tcttcctgca cagtaccggt aaccagcagg gtatattcat cttccagacc gaggtcttta
     6721 atgattttac cggcataaac catagatgcc atgccgcctt cctggtcgga agtaccgcga
     6781 ccaccgatta gctcatcagt ttccatgcct tcgtacggat cgaagtccca gtttttgatg
     6841 ttgccaatgc cgacggtatc gatatgagcg tccattgcca ccagacgcgg gccgtggccg
     6901 atataaccga gaacgttgcc catcgggtcg atttcaactt tatcgaagcc gactttttcc
     6961 atctcttctt taatacgatg tactacgcgt ttttcgtcgc agctttcact gggaatagca
     7021 accatgtcgc gcaggaagcg agtcatgtcc gcctggtaat cttttgcttt ttcaagaatc
     7081 agtttgaatg gaatattctt agccattatt tttctccaga ttttttactc cccgttttgc
     7141 agggagtagt tccaataggg tgattaaggt gctacagcgt gtttgccttc ccagacaact
     7201 tcgcggtagt gcttcacgtc ggtgtcgcct tcagtactga taaccagcac tacggcatct
     7261 ttgttcagcg ccagtttttc catcaggctt tgacgttgcg ggtgataatg aaccgctgcg
     7321 agaacgccca aaccgacagc gccggattca ccggagatga tgcgcgggtc gttgccgtac
     7381 ggattaccca gcacgcgcat acctaatgcg gcaacgctgt cctggcagga gatgaattgg
     7441 gtggcgcagt tacgtaggat ttcccagccc agcgggttag gttcgccaca ggccaggccc
     7501 gccatgatgg tggccatatc accgccaacg ttgacgatgt cgcctttgac gccggagcga
     7561 taaatacagt cagctttgtc aggttcaaca ataatgctgt gcagattttg cgggctgtag
     7621 acgtcgacca gataacccag cacaccaccg gccattgctc cgacaccggc ttgcagcaga
     7681 acgtgcgtcg gggttacgcc catttcacgc atttgctcga cggcttcatc tgccagggtt
     7741 gcgtagcctt gcatgatcca ggttgggatt ttggtgtaac cttcccatgc cgtgtcctgt
     7801 accacttccc agccgtgctg ctgcgcgtgt tgcatggtca ggcgaacggt atcgtcatag
     7861 ttcatatccg tgacgatgca ctcggcaccg aggttcagaa tggcgtcaac gcgttcctga
     7921 gcagaacctt tcggcatgta aatcaccgca ttctgtccga gttgctgtgc tgcccacgcc
     7981 acaccgcgcc cgtggttgcc gtcggtggtg gtcgcgaaag tcattttttc gccgatggca
     8041 tttttcaggt gctcaaatga cagcgtttcg atatcaagat gatatttttc acacaataat
     8101 tgagcgatgg cgtacgcacc gccaagcatt ttgaaggcgt tcagaccgaa tcgttttgat
     8161 tcgtctttga cgagaatttt cttcacacca aaaaggtttg cgagatcgtc cagcgcacaa
     8221 agcggtgttg ggcgataacc agctattttc tggtggaact ggcgcgccag tttggcctgg
     8281 ctttgcgaaa agagcggtga tgtttcgccg ttgaaaaatt tgttatcggc gatatcaatc
     8341 ttcaatgaga aaacggacat atcctatcct tttggcctct ggaaatagag ggccgaccag
     8401 ctgatcggcc cgaggggtta tttcacgcgt tcttgcgctt ctttcagcag ttgctcgagc
     8461 agtgcaccag gtttggcgta tttacgggac aggatcatcg cggcgatgat ataaggcttc
     8521 cagctggctt ctttgtaggt agcgatacgg tatttttcga atacgccttc agtcacttca
     8581 ccttctttgc aggatacgcc gctgatatca gctggcaggc agtgcatgta cagggcttcg
     8641 ccatcacggg tcagttccat catctcttca gtacaatgcc agtctttgtg ttgcgcgttc
     8701 tgtgccagac actgtttttc cagtgctttt aagccttcgt ggtcgttcgc acgcagcaat
     8761 tcagtacgct cttccatcac tttgtaaggt gcccatgact tcggataaac gatgtctgcg
     8821 tctttgaagg cttcttccat gctggtgacc tgacggaagc taccaccgga ggctttagca
     8881 ttgtttttcg ccacttcaac cacatccggg atcaggtcgt agccttccgg atgggccagg
     8941 gtgacatcca taccgaagcg agtcatcaga ccgatgatgc cttgtggtac agagagcggt
     9001 ttgccatagc ttggagagta ggcccaggtc atggcgattt ttttaccttt caggttttcc
     9061 agtgaaccaa agtgttcacg taaccacgcg aggtcagcca ttgactgagt cgggtggtca
     9121 atatcgcatt gcaggttcac taaagccgga cgctgtggca gtacaccctg cttgtaaccg
     9181 tcatcaagtg cagcgccaac ttcacgcata taggcgttgc ctgcgcccag atacatatcg
     9241 tcgcgaatac caatagcgtc ggcgcagaag gagatcatat tggcggtttc acgcacggtt
     9301 tcgccgtgag cgatttgtga tttgccttcg tcgagatctt gttgtgcaag gccgagcagg
     9361 ttaagcgcgg aagcataaga gaagcgggta cgggtggt
//
LOCUS       DADKRT010000170         9385 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.173, whole genome shotgun sequence.
ACCESSION   DADKRT010000170 DADKRT010000000
VERSION     DADKRT010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9385
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.173"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            150..731
                     /locus_tag="JQ356_003439"
     CDS             150..731
                     /locus_tag="JQ356_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HAY4623423.1"
                     /translation="MKQQEEHNNKIDLLEKQQAQLKSQLETIQKQQTGIISSTKTLTH
                     VIKSVKDQQNTFIFTEFNPAKTKYFILNNGSVALAGRVLSIDATENGSVIHISLVNLL
                     STPISNIGFNATWGGEKPVDAKEFARWQQLLFNTSMKSTLKLLPGQWQDINLTLKGVS
                     PNNLGYLKLAINMENIQFDNLPSAENRQKRSKK"
     gene            775..5391
                     /locus_tag="JQ356_003440"
     CDS             775..5391
                     /locus_tag="JQ356_003440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY4623424.1"
                     /translation="MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGG
                     MLSSFGALANAGNDNGQGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIA
                     EGQYSSAIGSKTHAIGGASMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALG
                     KLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANASKAYSMALGASSVASEEN
                     AIALGRSSVASGTDSLAFGRQSLASAANAIAIGAETEAAENATAIGNNAKAKGTNSMA
                     MGFGSLADKVNTIALGNGSQALADNAIAIGQGNKADGVDAIALGNGSQSRGLNTIALG
                     TASNATGDKSLALGSNSSANGINSVALGADSIADLDNTVSVGNSSLKRKIVNVKNGAI
                     KSDSYDAINGSQLYAISDSVAKRLGGGAAVDVDDGTVTAPTYNLKNGSKNNVGAALAV
                     LDENTLQWDQTKGKYSAAHGTSSPTASVITDVADGTISASSKDAVNGSQLKATNDDVE
                     ANTANIATNTSNIATNTANIATNTTNITNLTDSVGDLQADALLWNETKKAFSAAHGQD
                     TTSKITNVKDADLTADSTDAVNGSQLKTTNDAVATNTTNIANNTSNIATNTTNISNLT
                     ETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDGTVTATSSDAINGSQLYDLSS
                     NIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALAAINSSFSTSLGDVLLWDATA
                     GKFSAKHGTNGDASVITDVADGEISDSSSDAVNGSQLHGVSSYVVDALGGGAEVNADG
                     TITAPTYTIANADYDNVGDALNAIDTTLDDALLWDADAGENGAFSAAHGKDKTASVIT
                     NVANGAISAASSDAINGSQLYTTNKYIADALDGDAEVNADGTITAPTYTIANAEYNNV
                     GDALDALDDNALLWDETANGGAGAYNASHDGKASIITNVANGSISEDSTDAVNGSQLN
                     ATNMMIEQNTQIINQLAGNTDATYIQENGAGINYVRTNDDGLAFNDASAQGVGATAIG
                     YNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSSQVIAKGSRDTSITENGVVIGYDTT
                     DGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQNAIGAVATTPTKYFHANSTE
                     EDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDANALNGIAIGSNAQVIHVNSIAIG
                     NGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQITNVAAGSADTDAVNVGQLK
                     VTDERVAQNTQSITNLNNQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDANAQ
                     GKDSVAIGSGSIAAADNSVALGTGSVAEEENTISVGSSTNQRRITNVAAGVNATDAVN
                     VSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGSTTRISNVSAGVNNNDAVNYAQLK
                     QSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAMTGLPQAYTPGASMASIGGGT
                     YNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAALGAGIQW"
     gene            5759..7414
                     /gene="lldP"
                     /locus_tag="JQ356_003441"
     CDS             5759..7414
                     /gene="lldP"
                     /locus_tag="JQ356_003441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HAY4623425.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
                     GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
                     FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
                     VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
                     DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
                     WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            7414..8190
                     /gene="lldR"
                     /locus_tag="JQ356_003442"
     CDS             7414..8190
                     /gene="lldR"
                     /locus_tag="JQ356_003442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HAY4623426.1"
                     /translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
                     RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDIL
                     EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHN
                     IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAM
                     MAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA"
     gene            8187..9377
                     /gene="lldD"
                     /locus_tag="JQ356_003443"
     CDS             8187..9377
                     /gene="lldD"
                     /locus_tag="JQ356_003443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent L-lactate dehydrogenase"
                     /protein_id="HAY4623427.1"
                     /translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
                     VALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADTHGIP
                     FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
                     PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
                     ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK
                     GNAA"
BASE COUNT         2384 a         2342 c         2435 g         2224 t
ORIGIN      
        1 aactctaccg gcattgatcg ctggtcggag gaaataagga tttttacatg aacttgaaga
       61 agattttttt cagtgctgtc actgtttcag ttctctgcgc attaacggga tgtgactaca
      121 ttgaagaagg caagccagaa agtagtttat tgaaacaaca agaagaacat aacaataaaa
      181 ttgatctact tgaaaaacaa caagcacagc taaagagtca actggaaact attcaaaaac
      241 aacaaactgg cataataagc agtacaaaga ctttaactca cgtaattaaa tccgttaaag
      301 atcaacaaaa cacttttatt tttaccgagt ttaacccagc aaaaacgaag tatttcatcc
      361 tgaacaatgg ttcggtggct ttagcgggtc gagtgttatc cattgacgcc acagagaatg
      421 gcagtgttat tcatatttca ctggtcaact tattaagtac acctatctca aatattggtt
      481 ttaatgcgac atggggtggt gaaaaacctg tcgatgccaa agagtttgcc cggtggcaac
      541 aattactttt caacacatca atgaaatcca cattgaaatt attaccaggt caatggcaag
      601 acattaattt gaccctgaag ggtgtctcgc ccaataacct gggatatctg aagttagcca
      661 tcaacatgga aaatattcag ttcgacaatc ttccctctgc tgaaaatcgg cagaaaagaa
      721 gcaaaaaata aatgcagtta gtacacttat aacaaggaat agcgagcatc attaatgaac
      781 aaaatattta aagttatctg gaaccctgcg acagggaatt atactgttac cagcgaaacg
      841 gcaaaaagcc gtggcaagaa atctgggcgc agtaagctgt taatttctgc gctggttgcg
      901 ggtggaatgt tgtcgtcgtt tggggcattg gcgaatgccg ggaatgacaa cggtcagggt
      961 gttgattacg gtagtggatc agctggcgac ggctgggttg ctataggcaa aggggcgaaa
     1021 gcaaatactt ttatgaacac cagtggttcc agtactgctg tgggttatga cgctatagct
     1081 gaaggccaat atagctctgc catcgggtca aaaacccatg cgattggtgg tgcatcaatg
     1141 gcctttgggg ttagtgcaat atcagaaggc gatagaagta tagcactggg tgcctcttcg
     1201 tattcattgg gccaatactc aatggccctc ggccgttatt caaaagcatt gggtaaattg
     1261 tctattgcta tgggggactc ttccaaagcg gaaggagcaa acgccattgc cctgggaaat
     1321 gccactaaag ctactgagat tatgagtatt gctcttggcg acaccgccaa tgcgtcaaaa
     1381 gcgtattcaa tggcgctggg agcaagtagc gtcgcatctg aagaaaacgc aattgccctg
     1441 gggcgtagca gtgtagctag cggtactgac agcctcgcat ttggcagaca atcacttgcc
     1501 agcgcagcga acgctattgc gataggtgct gagaccgaag ccgctgaaaa tgcaactgct
     1561 attggcaata atgcgaaggc aaaagggact aatagcatgg caatggggtt cggaagcctt
     1621 gccgataaag tcaatactat cgcattagga aatggcagcc aggctctggc agataatgca
     1681 atcgccatag gccagggcaa caaagctgat ggcgtggatg ccatcgctct gggtaatggt
     1741 agccagtcga gaggcttaaa caccattgcc ttaggcacag ccagtaatgc aactggtgat
     1801 aagagtcttg cgcttggtag taatagcagt gccaacggta ttaactctgt cgcgctgggc
     1861 gcagattcca ttgcggattt agacaatacc gtctctgtcg gcaatagttc attaaaacgc
     1921 aagatcgtta atgtgaaaaa tggcgcgatc aagtctgaca gttacgatgc cattaatggt
     1981 tcacaacttt atgccattag cgactcggta gcaaaaaggc ttggaggagg ggctgcagta
     2041 gatgttgatg acggtactgt tacagcacca acctacaatt taaaaaatgg tagcaaaaat
     2101 aacgtagggg ctgcgctcgc tgtacttgat gaaaacaccc tgcaatggga ccaaaccaaa
     2161 ggcaaataca gcgctgctca tggtactagt agcccaactg ccagcgtaat caccgatgtt
     2221 gcggatggca cgatttcagc ctccagtaag gatgcggtta acggttccca actgaaagct
     2281 accaatgacg atgtcgaagc caacaccgcc aatatcgcta ctaataccag caacattgcc
     2341 acgaatacgg caaatattgc caccaatacc accaatatca ccaacctgac ggattccgtt
     2401 ggtgaccttc aggctgatgc cctgctctgg aacgaaacta aaaaggcatt cagtgcagct
     2461 cacggccagg ataccaccag caaaatcacc aacgttaaag atgccgacct gacggctgac
     2521 agcactgatg ctgttaacgg ctctcagctg aaaaccacca acgatgctgt ggcgacgaat
     2581 accaccaata tcgccaataa cacttccaat attgccacta acaccaccaa catctctaat
     2641 ctgactgaga cggtgactaa tcttggtgag gatgcgctga aatgggataa ggacaatggt
     2701 gtcttcactg cagctcatgg caacaatacc gccagcaaaa tcaccaatat cctggacggc
     2761 acagtcactg caaccagttc cgatgccatt aacggtagcc agctttatga cttaagcagc
     2821 aatatcgcca cctacttcgg cggcaatgct tctgtgaata ctgacggtgt gtttaccggt
     2881 ccaacctaca aaatcggtga aacaaattat tataacgtcg gcgatgcact ggctgcgatt
     2941 aactcctcat ttagcacgtc tctcggcgat gttctgcttt gggatgccac cgcaggtaaa
     3001 ttcagtgcca aacacggtac taatggtgac gcaagcgtga tcactgatgt cgcagatggt
     3061 gaaatttcag actccagttc tgacgcagta aacggctcac aactccacgg cgtgagcagt
     3121 tatgttgttg atgcgctggg gggtggtgcc gaagtcaatg cagacggcac catcactgcg
     3181 ccgacgtaca ccattgctaa tgctgattac gataatgtcg gtgatgccct gaatgctatc
     3241 gataccactc ttgacgacgc tctgctctgg gatgcggacg ccggtgaaaa tggtgcattt
     3301 agcgccgctc acggaaaaga taaaactgcc agtgtaatca ctaacgtcgc taacggtgca
     3361 atctctgctg ccagcagcga cgcgattaac ggctcacaac tctataccac caataagtac
     3421 atcgctgatg cgctggatgg tgacgcagaa gtcaacgctg acggcaccat caccgcaccg
     3481 acttacacca ttgcgaacgc cgagtacaac aacgtcggtg acgctctgga tgcgcttgat
     3541 gataacgccc tgctgtggga tgagactgcc aatggcggtg ctggagccta caatgccagc
     3601 catgacggta aagccagcat catcactaat gtcgctaatg gcagtattag tgaggacagt
     3661 accgatgcag tgaacggttc tcagttgaat gcgacgaata tgatgattga gcagaacacc
     3721 caaattatca atcagctcgc tggtaacacc gacgcaacct atatccaaga aaacggtgcg
     3781 ggtattaact atgtgcgtac taacgacgac ggcttagcgt tcaacgacgc cagcgcacag
     3841 ggtgttggcg ctacagctat aggttataac tctgtcgcca aaggcgatag cagcgtagct
     3901 attggtcagg gcagctacag cgacgttgat acgggtatcg ccctaggtag cagctctgtt
     3961 tccagccaag tgattgccaa aggctcccgt gacaccagca taacggaaaa tggcgttgtt
     4021 attggttacg acaccacgga tggcgaactg ctcggtgcat tgtctatcgg tgatgacggt
     4081 aaatatcgtc aaatcatcaa cgtagccgat ggttccgaag cccatgacgc cgttacggtt
     4141 cgtcaattgc agaatgcgat tggtgcggtc gcaaccacgc cgactaaata cttccacgct
     4201 aattcaacgg aagaagattc actggcagtg ggaactgact cgctggcaat gggtgcgaaa
     4261 accatcgtga atggcgataa aggtattggt atcggttatg gtgcctacgt ggacgcgaat
     4321 gcacttaacg gcattgccat tggtagcaat gcgcaagtca ttcatgtcaa cagtattgcg
     4381 ataggtaatg gttctacgac cactcgtggc gctcaaacca attataccgc ctacaacatg
     4441 gacgcaccgc agaactctgt cggtgaattc tcagtcggta gtgcggatgg tcaacgtcag
     4501 atcacaaacg tcgcagctgg ttcagcggat accgatgcgg ttaacgtggg tcagttgaaa
     4561 gtcactgatg agcgcgtagc gcaaaatacc cagagcatta ctaacctgaa caatcaggtc
     4621 actaatctgg atactcgcgt tactaatatc gaaaacggta ttggcgacat tgtcaccacc
     4681 ggtagcacca agtacttcaa gaccaacacc gatggcgtag atgccaacgc ccagggtaaa
     4741 gatagcgttg ctattggttc tggttccatt gctgccgctg acaacagcgt cgcactgggt
     4801 accggttccg ttgcagagga agaaaataca atctctgtag gttcttctac taaccaacgc
     4861 cgtatcacca acgtagctgc cggtgttaat gccaccgatg cggttaacgt gtcgcagctg
     4921 aaatcttctg aagcaggcgg cgtgcgctac gacaccaaag ctgatggttc tatcgactat
     4981 agcaatatca ccctcggtgg tggcaacggc agtacgactc gtatcagcaa cgtctccgct
     5041 ggcgtcaaca acaacgacgc ggtgaactac gcgcagttga agcaaagcgt gcaggaaacg
     5101 aagcaataca ccgatcagcg gatggttgag atggataaca aactgtctaa aactgaaagc
     5161 aagttgagcg gtggtatcgc ttctgcaatg gcaatgaccg gtctgccgca ggcttataca
     5221 ccgggtgcca gcatggcttc tattggtggc ggtacttaca acggtgaatc ggcagttgct
     5281 ttaggtgtat cgatggtgag cgccaatggt cgttgggtct acaaattaca aggtagtacc
     5341 aatagccagg gtgaatactc cgccgcactc ggtgccggta ttcagtggta atgatccatt
     5401 aagttagtgt gactaagggc aaacgccaaa ttgcctgatg cgttacgcgc atcaggcaag
     5461 ataaggcgct ccgggtcaac aatctaaggg caattctctg atgaggattg cccttttctt
     5521 taccagacat ctccccccac aagaattggc cctaccaatt cttcgcttat ctgacctctg
     5581 gttcacaatt ccccaattaa aactcacatc aatattgcca atacacaaca tttagttaac
     5641 cattcattgt cattatccct acacaacaca attggcagtg ccacttttac acaacgtgtg
     5701 acaaggagat gagcaacaga ctcattacac gatgtgcgtg gactccagga gacctgcaat
     5761 gaatctctgg caacaaaact acgatcccgc cgggaatatc tggctttcca gtctgatagc
     5821 atcgcttccc atcctgtttt tcttctttgc gctgattaag ctcaaactga aaggatacgt
     5881 cgccgcctca tggacggtag caatcgccct tgccgtggct ttgctgttct ataaaatgcc
     5941 ggtcgctaac gcgctggcct cggtggttta tggcttcttc tatggtttgt ggcccatcgc
     6001 gtggatcatt attgcagcag tgttcgtcta taagatctcg gtgaaaaccg ggcagtttga
     6061 catcattcgc tcgtctattc tttcgataac ccctgaccag cgtctgcaaa tgctgatcgt
     6121 cggtttctgt ttcggcgctt tccttgaagg agccgcaggc tttggcgcac cggtagcaat
     6181 taccgccgca ttgctggtcg gcctgggttt taaaccgctg tacgccgccg gactgtgcct
     6241 gattgttaac accgcgccag tggcatttgg cgcgatgggc attccaatcc tggttgccgg
     6301 acaagtaaca ggcatcgaca gttttgagat tggccagatg gtggggcgtc agctaccgtt
     6361 tatgaccatt atcgtgctgt tctggatcat ggcgattatg gacggctggc gcggtatcaa
     6421 agagacgtgg cctgcggtcg tggttgcggg cggctcgttt gccatcgctc agtaccttag
     6481 ctccaacttc attgggccgg agctgccgga cattatctct tcgctggtat cactgctctg
     6541 cctgacgctg ttcctcaaac gctggcaacc agttcgcgta ttccgcttcg gtgacttggg
     6601 ggcgtcacag gttgatatga cgctggccca caccggttac accgcgggtc aggtgttacg
     6661 tgcctggaca ccgttcctgt tcctgaccgc taccgtaaca ctgtggagca tcccgccgtt
     6721 taaagccctg ttcgcatcgg gtggtgcgct gtatgagtgg gtgatcaaca ttccggtgcc
     6781 gtacctcgat aaactggttg cccgtatgcc accagtggtc agcgaggcta cagcctatgc
     6841 cgccgtgttt aagtttgact ggttctctgc caccggcacc gccattctgt ttgctgcact
     6901 gctctcgatt gtctggctga agatgaaacc gtctgacgct atcagcacct tcggcagcac
     6961 gctgaaagaa ctggctctac ccatctactc catcggcatg gtgctggcgt tcgcctttat
     7021 ctcgaactat tccggactgt catcaacact ggcactggca ctggcgcaca ccggtcatgc
     7081 attcaccttc ttctcgccgt tcctcggctg gctgggggta ttcctgaccg ggtcggatac
     7141 ctcatctaac gccctgttcg ccgcgctgca agccaccgca gcacaacaaa ttggcgtctc
     7201 tgatctgttg ctggttgccg ccaataccac cggtggcgtc accggtaaga tgatctcccc
     7261 gcaatctatc gctatcgcct gtgcggcggt aggcctggtg ggcaaagagt ctgatttgtt
     7321 ccgctttact gtcaaacaca gcctgatctt cacctgtatg gtgggcgtga tcaccacgct
     7381 tcaggcttat gtcttaacgt ggatgattcc ttaatgattg ttttacccag acgcctgtca
     7441 gacgaggttg ccgatcgtgt gcgggcgctg attgatgaaa aaaacctgga agcgggcatg
     7501 aagttgcccg ctgagcgcca actggcgatg caactcggcg tatcacgtaa ttcactacgc
     7561 gaggcgctgg caaaactagt gagcgaaggc gtgctgctca gtcgacgcgg cggcgggacg
     7621 tttattcgct ggcgtcatga cacatggtcg gagcaaaaca tcgtccagcc gctaaaaacg
     7681 ctgatggccg atgatccgga ttacagtttc gatattctgg aagcccgcta cgccattgaa
     7741 gccagcaccg catggcatgc ggcaatgcgc gccacacctg gcgacaaaga aaagattcag
     7801 ctttgctttg aagcaacgct aagtgaagac ccggatatcg cctcacaagc ggacgttcgt
     7861 tttcatctgg cgattgccga agcctcgcat aacatcgtgc tgctgcaaac catgcgcggt
     7921 ttcttcgatg tcctgcaatc ctcagtgaag catagccgtc agcggatgta tctggtgcca
     7981 ccggtttttt cacaactgac cgaacaacat caggctgtca ttgacgccat ttttgctggt
     8041 gatgccgacg gggcgcgtaa agcaatgatg gcgcacctta gttttgttca caccaccatg
     8101 aaacgattcg atgaagatca ggctcgccac gcacggatta cccgcctgcc cggtgagcat
     8161 aatgagcatt cgagggagaa aaacgcatga ttatttccgc agccagcgat tatcgcgccg
     8221 cagcgcaacg cattctgccg ccgttcctgt tccactatat ggatggtggt gcatattctg
     8281 aatacacgct gcgccgcaac gtggaagatt tgtcagaagt ggcactgcgc cagcgtattc
     8341 tgaaaaacat gtccgactta agcctggaaa cgacgctgtt taatgagaaa ttgtcgatgc
     8401 cggtagcact ggcaccggtg ggtttgtgtg gcatgtatgc gcgtcgtggc gaagttcagg
     8461 cagccaaagc ggcggacacg catggcattc cgtttactct ctcgacggtt tccgtttgcc
     8521 cgattgaaga agtcgcgcca gccatcaagc gcccaatgtg gttccagctt tatgtactgc
     8581 gcgatcgcgg ctttatgcgt aacgcgctgg agcgagcaaa agcagcgggt tgttcgacgc
     8641 tggttttcac cgtggatatg ccgacaccgg gcgcacgcta ccgtgatgcg cattcaggta
     8701 tgagcggccc aaatgcggca atgcgccgct acttgcaggc ggtgacgcat ccgcaatggg
     8761 cgtgggatgt gggcctgaac ggtcgtccac atgatttagg taatatctca gcttatctcg
     8821 gcaaaccaac cggactggaa gattacatcg gctggctggg gaataacttc gatccgtcca
     8881 tctcatggaa agaccttgag tggatccgcg atttctggga tggcccgatg gtgatcaaag
     8941 ggatcctcga tccggaagat gcgcgcgatg cagtacgttt tggtgctgat ggaattgtgg
     9001 tttctaacca cggtggccgc cagctggacg gtgtactctc ttccgctcgt gcgttgcccg
     9061 ctattgcaga tgcggtgaaa ggtgatatcg ccattctggc ggatagcgga attcgtaacg
     9121 ggcttgatgt cgtgcgtatg attgcgctcg gtgccgacac cgtactgctg ggtcgtgctt
     9181 tcctgtatgc gctggcaaca gcgggccagg cgggtgtagc taacctgcta aatctgatcg
     9241 aaaaagagat gaaagtggcg atgacgctga ctggcgcgaa atcgatcagt gaaattacgc
     9301 aagattcgct ggtgcaaggg ctgggtaaag agttgcctgc ggcactggct cccatggcga
     9361 aagggaatgc ggcatagtcg tttgc
//
LOCUS       DADKRT010000171         9149 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.174, whole genome shotgun sequence.
ACCESSION   DADKRT010000171 DADKRT010000000
VERSION     DADKRT010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9149
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.174"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..867
                     /gene="maeB"
                     /locus_tag="JQ356_003444"
     CDS             <1..867
                     /gene="maeB"
                     /locus_tag="JQ356_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HAY4623428.1"
                     /translation="LIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFKEYWTEYF
                     QIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSVVKNVFGY
                     RDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFGIEPRVAL
                     LSHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDRMPDSPLK
                     GSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASVRRIVNMV
                     ALAVVEAQTQPL"
     gene            1159..1494
                     /gene="eutS"
                     /locus_tag="JQ356_003445"
     CDS             1159..1494
                     /gene="eutS"
                     /locus_tag="JQ356_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HAY4623429.1"
                     /translation="MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLN
                     YTLCEMTKS"
     gene            1507..1986
                     /gene="eutP"
                     /locus_tag="JQ356_003446"
     CDS             1507..1986
                     /gene="eutP"
                     /locus_tag="JQ356_003446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HAY4623430.1"
                     /translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT
                     PGEYFSHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD
                     MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
     gene            1961..2662
                     /gene="eutQ"
                     /locus_tag="JQ356_003447"
     CDS             1961..2662
                     /gene="eutQ"
                     /locus_tag="JQ356_003447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HAY4623431.1"
                     /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
                     ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
                     SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG
                     FMQWENAFFPWTLNYDEIDMVLEGVLHVRHEGQTMIAKAGDVMFIPKGSSIEFGMTSS
                     VKFLYVAWPANWQSL"
     gene            2659..3468
                     /gene="eutT"
                     /locus_tag="JQ356_003448"
     CDS             2659..3468
                     /gene="eutT"
                     /locus_tag="JQ356_003448"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001425897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HAY4623432.1"
                     /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR
                     IKFIDEQGRLFVDDEQQKPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM
                     VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGC
                     QAIVGLSDEDLHRLSHQPLRYLDHDHLVLEASHGRDAALLNLLRTKVRETETVAAQVF
                     ITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGERNDY"
     gene            3458..4474
                     /gene="pta"
                     /locus_tag="JQ356_003449"
     CDS             3458..4474
                     /gene="pta"
                     /locus_tag="JQ356_003449"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY4623433.1"
                     /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL
                     VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD
                     PLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSFIFLMLPQYSGP
                     ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV
                     QQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG
                     YNIAQRLGGYRAVGPLIQGLAVPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQ
                     TLVE"
     gene            4513..4806
                     /gene="eutM"
                     /locus_tag="JQ356_003450"
     CDS             4513..4806
                     /gene="eutM"
                     /locus_tag="JQ356_003450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HAY4623434.1"
                     /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM
                     VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL"
     gene            4913..5200
                     /gene="eutN"
                     /locus_tag="JQ356_003451"
     CDS             4913..5200
                     /gene="eutN"
                     /locus_tag="JQ356_003451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HAY4623435.1"
                     /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI
                     DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK"
     gene            5212..6615
                     /locus_tag="JQ356_003452"
     CDS             5212..6615
                     /locus_tag="JQ356_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HAY4623436.1"
                     /translation="MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAK
                     VAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP
                     GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAP
                     HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGE
                     AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI
                     VVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIA
                     AAIGLNVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH
                     TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
                     TFVRLRRCVLVDAFRIV"
     gene            6626..7462
                     /gene="eutJ"
                     /locus_tag="JQ356_003453"
     CDS             6626..7462
                     /gene="eutJ"
                     /locus_tag="JQ356_003453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HAY4623437.1"
                     /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM
                     VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPP
                     GTDPRISINVLESAGLEVSHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVT
                     YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIE
                     GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY
                     AK"
     gene            7536..9074
                     /locus_tag="JQ356_003454"
     CDS             7536..9074
                     /locus_tag="JQ356_003454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005147267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HAY4623438.1"
                     /translation="MTLCGPGSVSSCGQQAQTRGLKHLFVMADSFLHQAGMTAGLTRS
                     LAVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVALLVT
                     NPDSTLAEMSETSVLQPRLPLIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVL
                     SDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSA
                     RLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFN
                     IPTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEF
                     NRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPE
                     YLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYI
                     MGMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDP
                     SLFF"
BASE COUNT         2098 a         2384 c         2717 g         1950 t
ORIGIN      
        1 cttatcggtc gtccgaacgt gatcgaaatg cgcattcaga aactgggctt gcagatcaaa
       61 gcgggcgttg attttgagat cgtcaataac gaatccgatc cgcgctttaa agagtactgg
      121 accgaatact tccagatcat gaagcgtcgc ggtgtcactc aggaacaggc gcagcgggcg
      181 ctgatcagta acccgacagt gatcggcgcg atcatggttc agcgtgggga agccgatgca
      241 atgatctgcg gtacggtggg cgattatcat gaacatttta gcgtggtgaa aaatgtcttt
      301 ggttatcgcg atggcgttca caccgcaggt gcaatgaacg cgctgctgct gccgagtggt
      361 aacaccttta ttgccgatac ctacgtcaat gacgaaccag acgcagaaga gctggcggag
      421 atcaccttga tggcggcaga aactgtccgt cgttttggta ttgagccgcg cgttgctctg
      481 ttgtcgcact ccaactttgg ttcttctgac tgcccgtcgt cgagcaaaat gcgtcaggcg
      541 ctggaactgg tcagggatcg tgcgccagat ctgatgattg atggtgaaat gcacggcgat
      601 gcagcgctgg tggaagcgat tcgcaacgac cgtatgccgg acagcccttt gaaaggttct
      661 gccaatattc tggtgatgcc gaacatggaa gctgcccgca ttagttacaa cttactgcgc
      721 gtttccagct cggaaggtgt gactgtcggt ccggtgctga tgggcgtggc gaaaccggtt
      781 cacgtgttaa cgccgatcgc atcggtgcgt cgtatcgtca acatggtggc gctggccgtg
      841 gttgaagcgc aaacccaacc gctgtaattc ttttttaact ctcacgctta ccctgaatat
      901 tcagggtaag cggtttggct gcaatatatt agtaaagctt attactgagt ttgcgaataa
      961 taaaaaagca gtctatataa tatctcgata ttattttatt tatattcatg cgttgcatat
     1021 gaaagtttat gcaccacagc gaatatctct ccattcttag tgatctacct caccttttaa
     1081 acgcgcttgc cgaattttgt tatttactct gacgaaaaat tgtcacgata cacgaaagtt
     1141 tttcacaggc ggcgactcat ggataaagaa cgcatcattc aggaatttgt gcccggcaaa
     1201 caggtcacac tggcgcatct catcgcgcat cccggtgagg aactggcgaa gaaaatcggc
     1261 gttccggatg cgggcgcaat tggcattatg acgctaactc ccggcgaaac ggcgatgatc
     1321 gccggtgatt tagcgctgaa agccgctgat gtgcatatcg gttttctcga ccgcttcagc
     1381 ggtgcattgg tgatttatgg ctcggtgggc gcagtagaag aagcgttatc acaaaccgtc
     1441 agcggtttag gtcgcttatt aaattatacg ctttgtgaaa tgaccaaaag ttaatacgag
     1501 gcattcatga aacgaattgc gtttgtgggt agtgtcgggg caggaaaaac aacgttattt
     1561 aatgcgttgc aggggaatta taccctcgcc agaaaaacac aggccgtgga atttaatgat
     1621 aagggcgata ttgatacgcc gggtgaatat tttagccatc cccgctggta tcacgcctta
     1681 attaccacgc tacaggatgt agacatgctg atctatgtcc atggcgcaaa tgacccggaa
     1741 agtcggttgc ctgccgggtt gctggatatt ggcgtcagca aacggcaaat cgccgtcatc
     1801 agtaaaacgg acatgccaga tgctgacgtc gccgcaacgc gaaagttatt gcttgagacg
     1861 ggtttcgaag agccgatttt cgagctaaac agccacgacc cgcaaagcgt gcagcaactg
     1921 gtggattatc tggcatctct caccaaacag gaggaagcag gtgaaaaaac tcatcacagc
     1981 gaatgatatt cgtgaagcac acgcgcgcgg cgaacaggca atgtccgtgg ttctgcgcgc
     2041 cagcattatt accccggaag cccgtgaagt ggcggatcta ctgggtttta ccatcaccga
     2101 atgtgatgaa tcgatcccgg taacggcgtc cgtgcccgcc agcgtgccag ccgacaaaac
     2161 cgaaagccag cgcatccgcg aaaccatcat tgcccagctg ccggaaggcc agtttaccga
     2221 aagcctggtc gcacagctga tggaaaaagt gatgaaggaa aaacagtcgc tggagcaggg
     2281 cgcaatgcag ccgagcttca aatcggtgac cggcaaaggc ggcatcaaag tgattgatgg
     2341 cagcagcgtc aagtttggtc gtttcgacgg cgcagagccg cattgcgtgg gcttgactga
     2401 tcttgtgacc ggagacgacg gcagcagcat ggccgccggt tttatgcagt gggagaacgc
     2461 attcttcccg tggaccctga actacgacga aatcgacatg gtgctggaag gggtgctgca
     2521 tgttcgccac gaaggccaaa ccatgatcgc caaagcaggc gacgtgatgt ttatcccgaa
     2581 aggctccagc atcgaatttg gtatgacatc cagcgtgaaa ttcctgtatg tcgcctggcc
     2641 ggctaactgg caatccctat gaaagatttc atcaccgaag catggctaag agcgaaccat
     2701 acgctcagcg aaggcgcaga gatccatctc cctgcggaca gtcgcctgac gccctctgcc
     2761 cgggagttgc tggaaagccg ccatctgcgc atcaagttta ttgacgagca gggccgcctg
     2821 tttgttgacg atgaacagca gaagccgcag cccgttcatg ggctgaccag tagcgatgaa
     2881 catccgcagg cgtgctgcga actgtgccgc cagccggtgg caaaaaagcc ggatacgctg
     2941 actcacctgt cggcggaaaa aatggtcgcc aaaagcgatc cgcgtctggg ttttcgcgcg
     3001 gttctcgaca gcaccattgc gctggcagtg tggctgcaaa ttgaactggc ggaaccgtgg
     3061 cagccgtggc tggcggatat ccgttcgcgt cttggcaaca ttatgcgcgc cgatgcgctg
     3121 ggggaaccgc tgggctgcca ggcgattgtc gggctttctg acgaagatct gcatcggctt
     3181 tctcatcagc cgctgcgcta tctcgaccac gatcatctgg tgctggaagc cagccacggg
     3241 cgcgatgctg cgttgctcaa tctgctacgc accaaagtgc gggaaaccga aaccgtagcg
     3301 gcgcaggtct ttatcacccg cagctttgaa gtattacgcc cggacatttt gcaggcgctg
     3361 aaccgccttt ccagcacggt ctacgtgatg atgatcctga gcgtaacgaa gcagccgcta
     3421 acggtgaagc agatccaaca acgactgggg gaacgcaatg attattgaac gttgtcgtga
     3481 actggcgttg cgagcgcccg ccagagtggt ttttccggat gcgttagatc aacgtgtgct
     3541 gaaagccgcg caatatttac atcaacaagg tctggcaacg cccattctgg tcgccaatcc
     3601 gtttgaactt cgtcagtttg cgctcagtca cggcgtggcg atggacgggc tacaggtgat
     3661 tgatccgcat ggcaacctcg caatgcggga agaatttgct catcgctggc tggcccgcgc
     3721 gggcgaaaaa acgccgccgg atgcgctgga aaaacttacc gaccctctga tgttcgccgc
     3781 agcaatggtc agcgccggta aagcggatgt ctgtatcgca ggcaacctct cttccacggc
     3841 aaatgtgctg cgtgccggat tacgcattat cggcttgcag ccaggctgta aaacgctctc
     3901 tttcattttc ctgatgttgc cacagtacag cggcccggcg ttgggctttg ccgattgcag
     3961 cgtggtgcca cagccgacgg cggcgcagct ggcggatatc gcgcttgcca gtgccgaaac
     4021 ctggcgcgcc atcaccggag aagagccgcg cgtggcgatg ctgtcgtttt ccagcaatgg
     4081 tagcgcccgt cacccctgtg ttgctaacgt ccagcaggcg acagaaatcg tccgtgagcg
     4141 cgcaccaaag ctggtggtgg atggcgagtt acagtttgac gccgccttcg tgccggaagt
     4201 ggcggcgcaa aaagcgcctg ccagcccgct acagggcaag gccaatgtga tggtttttcc
     4261 gtcgctggaa gccggaaata ttggttacaa catcgcacaa cgactcggcg gatatcgtgc
     4321 cgtcgggcca ctgatacaag gacttgccgt gccgatgcac gatctctctc gtggttgtag
     4381 cgtgcaggaa attatcgagc tggcgctggt ggcagctgtg ccgcgtcaga cagaagtgaa
     4441 ccgcgaaagc agtttacaaa cactggttga atgaacggtc ccgttctgga ccctgataaa
     4501 gaggaaagca caatggaagc attaggaatg atcgaaaccc ggggcctggt tgcactgatt
     4561 gaggcttctg acgcgatggt gaaagctgcg cgcgtcaagc tggttggtgt taagcagatt
     4621 ggcggcggcc tgtgtactgc catggttcgt ggtgatgttg cagcctgtaa agccgcgacc
     4681 gatgcaggtg ccgcagcggc acagcgtatc ggcgagctgg tatctgtaca cgttatcccg
     4741 cgtccgcacg gcgacctgga agaagtcttc ccgatcggcc tgaaaggcga tagcagcaac
     4801 ctgtaatcac cctgtgtgac gtcgattcgg gcgttacgct ctctcctttt tcattttacc
     4861 ttctgcggag ggtaggggga gcttttacct gaaatacgcc acggaggcgg gtatgaaact
     4921 ggcagtcgtc actggacaaa ttgtttgtac cgtacgccat cacggactgg cgcatgacaa
     4981 attgctgatg gtggaaatga ttgatccaca aggtaatcct gacgggcaat gcgccgtcgc
     5041 catcgacaat attggcgcgg gaaccgggga gtgggtgtta ctggtgagtg gcagttccgc
     5101 ccgccaggcg cataaaagcg aaacgtcacc ggtcgatctg tgcgtgattg gcattgtcga
     5161 tgaggtggtg tctggcggtc aggtaatttt ccacaaataa ggcagaacat catgaatcaa
     5221 caggatattg aacaggtggt gaaagcggta ctgctgaaaa tgcaaagcag tgacacgccg
     5281 cccgccgccg ttcatgagat gggcgttttc gcgtccctgg atgacgccgt tgcggcagcc
     5341 aaagtcgccc agcaagggtt aaaaagcgtg gcaatgcgcc agttagccat tgctgccatt
     5401 cgtgaggcag gcgaaaaaca cgccagagat ttagcggaac ttgccgtcag tgaaaccggc
     5461 atgggccgcg ttgaagataa atttgccaaa aacgtcgctc aggcgcgcgg cacgccaggc
     5521 gttgagtgtc tctctccgca ggtgctgacc ggcgacaacg gcctgacttt aattgaaaac
     5581 gcgccctggg gcgtggtggc ttcggtaact ccgtccacta acccggcggc aaccgtaatt
     5641 aataacgcca tcagcctgat tgccgcgggc aacagcgtca tttttgcccc gcatccggcg
     5701 gcgaaaaaag tctcccagcg ggcgatcacg ctgctcaacc aggcgattgt tgccgcaggc
     5761 gggccggaaa acttactggt tactgtggca aatccggata tcgaaaccgc gcagcgtttg
     5821 ttcaagtttc cgggcatcgg ccttctggtg gtgaccggcg gcgaagcggt agtagaagcg
     5881 gcgcgtaaac acaccaataa acgtctgatt gccgcaggcg ctggcaaccc gccggtagtg
     5941 gtggatgaaa ccgccgacct cgcccgtgcc gctcagtcca tcgtcaaagg cgcttctttc
     6001 gataacaaca tcatttgtgc cgacgaaaag gtactgattg ttgttgatag cgtagccgat
     6061 gaactgatgc gtctgatgga aggccagcac gcggtgaaac tgaccgcaga acaggcgcag
     6121 cagctgcaac cggtgttgct gaaaaatatc gacgagcgcg gaaaaggcac cgtcagccgt
     6181 gactgggttg gtcgcgatgc ggcgaaaatc gcggcggcaa tcggcctgaa cgtgccgcaa
     6241 gaaacgcgtt tgctgtttgt ggaaaccact gcagaacatc cgtttgccgt gaccgaactg
     6301 atgatgccgg tgctgcccgt cgtgcgcgtc gccaacgtgg cggatgccat tgcgctggcg
     6361 gtgaaactgg aaggcggttg ccaccacacg gcggcaatgc actcgcgcaa catcgaaaac
     6421 atgaaccaga tggcgaatgc tattgatacc agcattttcg ttaagaacgg accgtgcatt
     6481 gccgggctgg ggctgggcgg ggaaggctgg accaccatga ccatcaccac gccaaccggt
     6541 gaaggggtaa ccagcgcgcg tacgtttgtc cgtctgcgtc gctgtgtatt agtcgatgcg
     6601 tttcgcattg tttaaggagt aacagatggc gcacgacgaa caatggctca ccccacgtct
     6661 gcaaacggcg gcaacgctgt gtaaccagac gcccgccgcg acggaatctc cgctgtggct
     6721 gggggtggat ctgggcacct gcgatgtggt gtcgatggtt gtcgaccgcg acggtcagcc
     6781 ggtggcggta tgcctcgact gggccgatgt ggtccgcgac ggcatcgtct gggatttctt
     6841 cggcgctgtc accattgttc gtcgccatct cgacacgctc gagcagcaat tcggtcgccg
     6901 ttttagccat gcggcgactt catttcctcc aggtacggac ccgcgtattt ccatcaacgt
     6961 gctggagtct gctggactgg aagtgagcca tgtgctggat gagccaaccg cagttgcgga
     7021 gctgctgcaa ctggacaacg ccggtgtagt ggatatcggc ggcggcacta ccggcattgc
     7081 catcgtgaaa aagggcaagg tgacgtactc ggcggatgaa gcaaccggcg gacatcacat
     7141 ctctctgact ctcgccggaa atcgccgtat ttcgctggaa gaggcggagc agtacaagcg
     7201 cggtcacggt gaagagattt ggcctacggt gaaaccggtg tacgaaaaaa tggcggacat
     7261 tgtcgcccgg catattgaag ggcagggcat tactgattta tggctggcgg gcggctcttg
     7321 tatgcaaccg ggcgtggcgg aactgtttcg caaacaattc ccggcgttac aggtgcattt
     7381 accgcagcac agtttgttta tgaccccgct ggcgatcgcc agtagtgggc gagagaaagc
     7441 ggaggggcta tatgcaaaat gaattgcaga ccgcgctctt tcaggcgttc gataccctga
     7501 atctgcaacg ggtaaaaaca tttagcgttc caccggtgac gctttgcggt ccgggctcgg
     7561 tgagcagttg cggacagcaa gcgcaaacgc gtgggctgaa acatctgttc gtgatggcag
     7621 acagcttttt gcatcaggca gggatgaccg ccgggctgac gcgcagcctg gctgttaaag
     7681 gcatcgccat gacgctctgg ccatgtccgg tgggcgaacc gtgcatcacc gacgtgtgtg
     7741 cagccgtggc gcagttgcgt gagtcaggct gtgatggggt gatcgcattt ggcggcggct
     7801 cggtgctgga tgcggcgaaa gccgtggcgt tgctggtgac gaacccggat agcacgctgg
     7861 cagagatgtc agaaaccagc gttctgcaac cgcgcttgcc gctgattgcc tatgaagatg
     7921 actgcgtgac gcggctgatt caggacgatg ttaacgaaac ggcctacaac cagattaaaa
     7981 actggagcat cagcgaactg cgtgagtatg tgctgagcga tgaaactagc gtggacgaca
     8041 ttgcctttac ccgcaaaggg ctgacctcgg aagtggtcgc ggcggtagcg aagatttgct
     8101 ccaacgcgga cctgatctac ggcgcgaaga aaatgccggt aatcaaaaag gccaatacca
     8161 ccatcggtat tccgggcacc ttcagcgccc gtttgcagcc aaatgacact cgtgacgacg
     8221 tgcaaagtat cgccgcgcaa atctacgaag ggctttcctt cggggtgggc gatgcggtga
     8281 tcggcgtcaa cccggtaact gacgacgtgg aaaacttaag ccgcgtgctg gataccattt
     8341 atggcgtgat cgacaaattc aacatcccaa ctcagggctg cgtactggcg cacgtcacca
     8401 cccagatcga agcgattcgt cgcggcgcgc ctggcggact gattttccag agtatctgtg
     8461 gcagcgaaaa agggctgaaa gagtttggcg tggaactggc gatgctcgac gaagcgcgcg
     8521 cagtgggtgc agagttcaac cgtatcgccg gggaaaactg cctctacttc gaaaccggac
     8581 aaggctctgc gctatccgct ggcgctaact tcggcgctga ccaggtgacg atggaagcac
     8641 gtaactatgg gctggcgcgt cattacgatc cgtttatcgt caacaccgtg gttggcttta
     8701 ttgggccgga gtatctctac aacgaccgcc agattatccg tgctggctta gaagatcact
     8761 ttatgggcaa gctgagcggc atctctatgg gctgtgactg ctgctacacc aaccacgctg
     8821 acgctgacca gaacctcaac gaaaacctga tgatcctgct cgccaccgca ggctgcaact
     8881 acatcatggg gatgccgctg ggtgatgaca tcatgctcaa ctaccagacc accgcattcc
     8941 acgataccgc cactgtgcgt cagttactca acctgcgccc gtcaccagag tttgaacgct
     9001 ggctggaaag catgggcatt atggcaaacg gtcgcctgac caaacgggcg ggcgatccgt
     9061 cactgttctt ctgatgacgc ggagataaca catcatggat caaaaacaga ttgaagaaat
     9121 tgtacgcagc gtgatggcgt caatgggac
//
LOCUS       DADKRT010000172         9089 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.175, whole genome shotgun sequence.
ACCESSION   DADKRT010000172 DADKRT010000000
VERSION     DADKRT010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9089
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.175"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            52..936
                     /locus_tag="JQ356_003455"
     CDS             52..936
                     /locus_tag="JQ356_003455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HAY4623439.1"
                     /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
                     AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
                     WTLKSHHEDADGVALTFELTQSEETKKFCPHDFTLLAHFRVGKTCEIDLESHGEFETT
                     SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
                     VINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQK
                     VTKEKPAHLAQSIRVAKR"
     gene            complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JQ356_003456"
     CDS             complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JQ356_003456"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal reductase YeaE"
                     /protein_id="HAY4623440.1"
                     /translation="MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIEL
                     GLTLIDTAEMYADGGAEKVVGEALTGLRDNVFLVSKVYPWNAGRQKAINACEASLRRL
                     NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQ
                     CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA
                     HNISSAQVLLARVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPK
                     GKTALDMV"
     gene            complement(1931..2677)
                     /locus_tag="JQ356_003457"
     CDS             complement(1931..2677)
                     /locus_tag="JQ356_003457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltA-interacting protein"
                     /protein_id="HAY4623441.1"
                     /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
                     DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
                     DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
                     GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
                     YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
     gene            3113..5047
                     /gene="yeaG"
                     /locus_tag="JQ356_003458"
     CDS             3113..5047
                     /gene="yeaG"
                     /locus_tag="JQ356_003458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
                     /protein_id="HAY4623442.1"
                     /translation="MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLM
                     AIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK
                     KQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQI
                     LEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDEN
                     NQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLL
                     TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR
                     ISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGES
                     LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL
                     EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT
                     YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN
                     NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG
                     YTRKQVRLLCEWYLRVRKSS"
     gene            5160..6443
                     /locus_tag="JQ356_003459"
     CDS             5160..6443
                     /locus_tag="JQ356_003459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HAY4623443.1"
                     /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAMNKRSVT
                     DVDSGESISIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ
                     GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGV
                     PANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAE
                     LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL
                     YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP
                     AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL
                     QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKD"
     gene            6590..8065
                     /locus_tag="JQ356_003460"
     CDS             6590..8065
                     /locus_tag="JQ356_003460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HAY4623444.1"
                     /translation="MIQSTRISMGLFFKYFLSLTKIDPSQNYISLPSIKSSTHIALLF
                     MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNA
                     VIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVS
                     IFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYN
                     ADYSLYVVDYCPDNHTATRGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLA
                     SLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLT
                     NIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQ
                     QSIRPDDILARLEGEVFGLLFTELNSAQAKIIADRIRKNVELLTGFSNRYDVPEQMTI
                     SIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI"
     gene            8159..8245
                     /locus_tag="JQ356_003461"
                     /pseudo
     CDS             8159..8245
                     /locus_tag="JQ356_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            8246..>9089
                     /locus_tag="JQ356_003462"
     CDS             8246..>9089
                     /locus_tag="JQ356_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY4623445.1"
                     /translation="MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQ
                     KADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHK
                     YPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDL
                     NDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN
                     VMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGREVAK
                     FSVPL"
BASE COUNT         2393 a         2181 c         2107 g         2408 t
ORIGIN      
        1 cttcggtcgc tctttttttt acctgataaa atgaagttaa aggactgcgt catgattaag
       61 aaaatttttg cccttccggt catcgaacaa atctcccctg tcctctcccg tcgtaaactg
      121 gatgaactgg acctcattgt ggtcgatcat ccccaggtaa aagcctcttt tgcattacag
      181 ggcgcacacc ttctctcgtg gaaacctgcg ggtgaagaag aagttctgtg gttgagcaac
      241 aacacaccgt tcaaaaatgg cgtcgctatt cgcggtggcg taccggtttg ctggccgtgg
      301 tttggtccgg cggcacaaca aggtctgcct gcgcacggtt ttgcccgcaa cctgccgtgg
      361 acgctgaaat cacatcatga agatgctgat ggcgtagcgc tgacttttga attgacgcaa
      421 agcgaagaga cgaaaaaatt ctgtccgcac gactttacgc tgttagcgca tttccgcgtg
      481 ggtaaaacct gtgaaatcga tcttgaatca catggcgaat ttgaaaccac ctctgccctg
      541 catacctact ttaacgtggg tgatatcgct aaggtaagcg tcagtgggct gggcgatcgc
      601 ttcattgata aagtgaatga cgcgaaagaa gatgtactga ccgacggtat tcagaccttc
      661 cctgaccgta ccgatcgcgt gtatctgaat ccgcaagatt gcagcgtgat taatgatgaa
      721 gcgctgaatc gtattatcgc cgtaggccac cagcatcatc tgaacgttgt aggctggaac
      781 ccgggaccgg cgctttcaat tagcatgggc gatatgccgg atgatggcta caaaacattt
      841 gtttgtgtag aaacggctta cgcttcagaa acgcaaaaag tcaccaaaga gaaacctgca
      901 catctggcgc aatccattcg cgttgcgaaa cgttaatttg cgttaatgtt gtgtgccggg
      961 tgcgatgcat ccggcacgta tcaacatcac accatatcca gcgcagtttt tccttttggt
     1021 gccggatacg ctttatccag catggttaat tccgctgacg aaagttcgac ctcaagcaca
     1081 gccgcattct gttgaacatg ggcaatcgtg gccgcttttg gaatcgccat cacaccctga
     1141 tggctgatta ccctcgccaa caatacttgt gccgagctga tattgtgagc atgtgcaatt
     1201 tcgttgacta ccgcgttttt taacagtcca ttgcgcaacc gcccggcctg ggctaatgga
     1261 ctgtaagcca tcaccggcat ctgctgttgc tggcaccagg ggagtagatc gtactcaatc
     1321 cctcgtgaac cgagatggta aagcacctga ttagtggcac actgatttcc ccccggcagc
     1381 tgccagagtt cctgcatatc agcataatca aggttagaaa cgccccagcg gcggattttt
     1441 ccctgggcga tcaatttttc catcgctgca acagtctctt caaaagcgaa actgccagac
     1501 cagtgtaata agtagagatc gagataatca gtattgagac ggcgtaaact ggcttcgcat
     1561 gcatttatcg ctttttgcct gccagcattc cacggataga ctttagagac gagaaagacg
     1621 ttatcacgca gaccggttaa tgcttcccca accacctttt cggcaccgcc atcggcatac
     1681 atttcggcgg tatcaatgag ggttaaaccg agctcaatgc ccgcgcgtag tgcagcaact
     1741 tctgttttgc gctgactggc atcttcgccc atataccatg ttccctgccc tatggctggc
     1801 agtgagacat cgccactaaa ttgaatcatt ttttgttgca ttgtttcctc ccaggtattg
     1861 caccaccgta atgcaaaaca gggcgtgacg ccctgttttt atgcacaaaa tgccctggaa
     1921 agatgcatta tcagaatttg taggtgatcc cggtagaaat caggccagtc caggatttat
     1981 ccaccatcgg gctgtcagta acttcatcag acagacgggt atagcgcgcg gtaccgtaaa
     2041 cactccagtc gccgaggaag ttgtagctgg cgctcagctc caggtaaggg ctccagctgt
     2101 cgttcgggtt atagccacgc agaccgctgc gagcggactc tttgcgcgat acgccataat
     2161 agtattcgtt ctggttttcg ctgttccact gcacaccaat acccggagtc acggtcaggc
     2221 caccgttggt gtaacgatac aaccaggcca tatcccagac aatgccgttg ctgttatcca
     2281 gggtatcgcc agccagggtg gtacgcaggt aaccgtactg ggtaaagtga gcataagaca
     2341 gaccagccat catggtgctc ttacggtcat ccaggtgacg catttggtga tcgccactgt
     2401 ctttcgcttt gaagtaaagc ggcgaccagt aagcggtaat tgaaagttta tccgttgcgt
     2461 cattccacag gtagtaacca ccacctaagc cacggaacca gaagttatcg ccttcatagt
     2521 tgattaccgg tactgggtaa acatcggtat cgtaatcttt atatgggtgc tcaacgacac
     2581 ctacgcctgc gcccaaggaa aatttacctt cagcgtgcgc tacgcctgca gacgttgcga
     2641 taagcactcc aagtgccaga agtttgagtt tggtcacaat taatcattcc ttaaacaaat
     2701 gtttagcggg cgacaaagtt tacccgtcaa tacatcgaaa cccaaccttt ttacgttttc
     2761 attttttaaa gtaactgttt aattttcctg ccgcggatga caccgcgctt acagccaaat
     2821 gaatttagcg ttactggcga gcctggtctt tacattaatt atgcaaaatt tatggatgag
     2881 ttgttgatat gccattgaaa ttaagaaagc cgtgcaggca agttttccat ttgccatcta
     2941 cgcttaattt tgaaggtgta tcaccgggca cgttgttctc atcgtcgata aaatggcatg
     3001 agagttgctg tgttttagca agagacgtcg ttcagtttac ctcttccggg aggctctact
     3061 attcatatga acggctctta acctgtgcta aaaaacgaaa ggacggcata ccatgaatat
     3121 attcgatcac tatcgccagc gatatgaagc tgccaaggac gaagagttca cactgcagga
     3181 gtttcttacc acttgtcggc aagatcgcag tgcttatgcc aacgcggctg agcggctatt
     3241 gatggctatc ggtgagcctg tcatggtcga tacagcccag gaacccagac tttctcgact
     3301 cttttctaac cgggtcattg cacgttatcc ggcgtttgaa gagttttacg gcatggaaga
     3361 cgcgattgaa cagattgtct cttatctgaa acacgcggct caggggctgg aagagaagaa
     3421 acaaatcctg tatctgctgg ggcctgtggg tgggggtaaa tcatcgcttg ctgagcgact
     3481 gaaatcatta atgcagctcg taccgattta tgtattgagc gccaacggtg agcgtagccc
     3541 ggtcaacgat catccgttct gtcttttcaa tccgcaggaa gatgcgcaga ttctggaaaa
     3601 agagtatggc attcctcgcc gttatctcgg caccatcatg tcgccgtggg cggcaaaacg
     3661 cctgcatgaa tttggtggcg atatcactaa gttccgggta gtgaaggtct ggccgtcaat
     3721 tctgcaacaa attgctatcg ccaaaacgga acccggcgat gagaacaacc aggacatctc
     3781 cgcgctggtt gggaaagtcg atattcgtaa actcgaacac tacgcgcaga atgacccgga
     3841 cgcctacggc tattccggtg cgctgtgccg cgccaatcag gggatcatgg aattcgttga
     3901 gatgtttaaa gcaccgataa aagtgctgca tcccttgtta accgccactc aggaaggtaa
     3961 ctacaacggg acggaaggta tctccgccct gccgttcaac gggattattc tcgcccactc
     4021 gaacgagtcc gaatgggtca ctttccgtaa taacaaaaac aacgaagcct tcctcgaccg
     4081 tgtttacatc gtgaaggtgc cgtattgctt gcgcatttcc gaagagatca aaatctacga
     4141 gaaattgctt aatcacagtg aattgactca cgccccatgc gcccctggca cgctggaaac
     4201 actgtcacgt ttttccattc tttcgcgcct gaaagagcca gaaaactcca gcatttattc
     4261 aaagatgcgg gtttatgatg gcgaaagtct gaaagacacc gatcccaaag ccaagtcgta
     4321 tcaggaatat cgtgactacg ccggtgtcga tgaagggatg aacggtctgt cgacgcgttt
     4381 tgcgtttaag atcctctccc gcgtgttcaa cttcgatcat gtagaagtgg cggcaaaccc
     4441 ggtccatctg ttctacgtcc tggaacagca gatcgagcgc gagcagttcc cgcaagagca
     4501 ggcagaacgc tatctggagt tcctgaaagg ttatctgatc ccgaaatatg ccgagtttat
     4561 cggcaaagag atccagacgg cctaccttga atcctattcc gaatatgggc aaaacatttt
     4621 cgaccgttat gttacctacg cggatttctg gattcaggat caggagtatc gcgatccgga
     4681 taccgggcag ctgtttgacc gcgagtctct taacgccgag ctggagaaaa tcgagaaacc
     4741 ggcggggatc agtaatccaa aagatttccg caacgagatt gttaacttcg tactgcgcgc
     4801 cagagcgaat aacagcggac gcaatccgaa ctggaccagc tatgaaaaac tgcgcacggt
     4861 tatcgagaag aaaatgttct ccaataccga ggagctgttg ccggttatct cgtttaacgc
     4921 caaaacgtca accgacgagc agaagaaaca cgacgacttt gtcgaccgta tgatggaaaa
     4981 aggctacacc cgtaaacagg tgcgtttact gtgcgaatgg tatttgcgcg tacgtaaatc
     5041 gtcttaacaa ccctggcccg gtacacatgc taccgggcct acaacgacag cgaaccgtgg
     5101 gccagagaaa tggcaacaca ggcgtagcat acagttggca aatgtagtac ggggggcata
     5161 tgacctggtt tattgaccgg cgtctgaacg gcaaaaacaa aagcatggtg aatcgccagc
     5221 gttttttacg ccgttataaa gcgcaaatta aacagtcgat ctccgaggcc atgaataagc
     5281 gttcggtgac tgacgtcgac agcggcgaat ccatatccat tcccacggaa gatattagcg
     5341 aaccgatgtt tcatcagggg cgtggcggcc tgcgccaccg cgtacatccg ggcaatgacc
     5401 atttcgtcca gaacgaccga attgaacgtc cccagggtgg cggcggaggt tccggcagtg
     5461 gtcagggcca ggccagccag gatggtgaag gtcaggatga atttgtcttt cagatttcga
     5521 aagatgagta tcttgatctg ctctttgaag atttggcctt accgaatctg aaacaaaacc
     5581 aacaacgcca gctgaccgaa tataaaacgc atcgggcggg ttataccgct aacggcgttc
     5641 cagccaatat cagcgttgtg cgttccttgc agaactcact ggcgcgacgc acagccatga
     5701 cggcgggcaa gcgacgggaa cttcatgcgc tggaagagaa tttggccatc atcagcaaca
     5761 gtgaacctgc gcaactgctg gaagaggaac gtctgcgcaa agaaattgca gaattacgtg
     5821 ccaaaattga acgcgtccct tttattgaca ccttcgattt acgttacaag aactacgaga
     5881 agcggcccga tccctccagc caagcagtga tgttttgcct gatggacgtt tccggttcaa
     5941 tggatcaatc cactaaagat atggctaagc gtttttatat tctgctgtat ctgttcctca
     6001 gcagaacgta taagaacgtg gaagtcgtat acatccgcca tcatacccaa gcgaaagaag
     6061 tcgatgaaca tgagtttttc tactcgcagg aaacaggcgg caccattgtt tccagcgccc
     6121 tgaaactgat ggatgaggta gtgaaagagc gttataaccc ggcacagtgg aatatttacg
     6181 ctgcacaagc atcggacggc gataactggg ccgatgactc tccgctttgc catgaaatcc
     6241 tggcgaaaaa attattacct gttgttcgtt attacagcta tatcgaaatt acccgtcgtg
     6301 cacatcagac attgtggcga gaatatgagc atctgcaatc tactttcgac aactttgcga
     6361 tgcagcacat ccgcgaccag gatgatattt atccggtgtt ccgtgaactg tttcataaac
     6421 aaaatgcaac agctaaagac taaaactatc agccaggtca ttatcgcctg gctgattttt
     6481 agcttactgt aaattatctc atttattaca tacattagct tacaatcgct ttaaatatga
     6541 cagcataacc tttacataat ttagttccag aaaacaatca ttcggaaaaa tgattcagtc
     6601 aacacgtatt tccatggggt tattctttaa atatttttta tcgttaacga aaattgatcc
     6661 tagtcaaaac tatatatctc tgccatcaat aaaatccagc actcacattg ctctcctttt
     6721 tatggtttct atgggtacac aaaaattaaa agctcaaagc ttttttattt tcagtttatt
     6781 gctgacatta attttatttt gcattactac cttatataac gaaaacacaa atgtaaaact
     6841 catcccacag atgaattacc tgatggttgt tgtggctttg tttttcctta acgccgtcat
     6901 ttttcttttc atgttaatga aatatttcac taacaaacaa attttaccaa cactcatttt
     6961 aagccttgca ttcttaagtg gccttatcta tttagttgaa accattgtaa ttatccataa
     7021 accaattaac ggcagtacac tgatccagac aaagtcgaat gatgtttcta ttttctatat
     7081 tttccgccaa ctcagtttta tttgtttaac ctcgctggca ctcttttgtt atggaaaaga
     7141 caacatcctt gacaacaata agaaaaaaac gggaatcctg ttgctggcgt tgattccttt
     7201 tttagttttt ccccttctgg cacacaatct gagcagttat aacgctgact attctttgta
     7261 tgtcgtcgac tactgtccgg acaaccatac tgcgaccagg ggaatcaact atacaaaaat
     7321 attggtttgt ctgtgggcat ttttactgtt ctttattatc atgcgtacac gattagccag
     7381 cgaactatgg ccgttaatag cattattatg tctggcatcg ctatgctgca acttacttct
     7441 actgactctg gatgagtata attacaccat ctggtatatc agtcgcggga ttgaagtttc
     7501 cagtaaactg tttgttgtgt cttttctgat ttataacatt tttcaggagc tgcaactctc
     7561 cagcaaactg gcagttcatg atgtgctgac caatatttat aatcggcgct actttttcaa
     7621 cagcgtagag tcattattgt cgcgacctgt tgttaaggac ttctgtgtca tgctggttga
     7681 tattaatcag ttcaaacgca tcaatgccca atggggacat cgtgtgggtg ataaagtgct
     7741 ggtttcaatt gtcgatatta tccagcaaag catccgccct gatgatattt tagcgcgact
     7801 ggagggtgag gtgtttggct tgctatttac cgaactcaat agtgcccagg caaaaatcat
     7861 tgcggatcgt atacgtaaaa atgtcgaact cctgaccggc tttagtaaca gatatgatgt
     7921 tcctgaacaa atgaccatca gtattggcac ggttttttca acgggtgaca cgcgtaatat
     7981 ctcgcttgtc atgacggaag cagataaagc cttacgcgaa gcgaaaagcg aggggggcaa
     8041 caaagtgatt attcatcata tttaagtgca aaaatattca gagccatgct ttttgcgtgg
     8101 cttttgcata caatttatta ctattacccc taaatttccc ctccccagcg gcgcagagat
     8161 gagtataatt agcgcccctg tgccaggccg caatcgaact ttatctggtt ttctcgtttc
     8221 actaactgaa ggagtgccat ttatcatgaa attgcaccat agaatgctcc ggcattttat
     8281 cgccgcaagt gtcattgtgc tgacatcttc cttccttatt tttgaacttg tcgccagcga
     8341 cagagcaatg agtgcctatc tgcgctatat cgtgcagaaa gcagactcct cctttcttta
     8401 tgataagtat cagaatcaga gtattgccgc gcatgtgatg cgcgctctcg ctgctgagca
     8461 gtcggaagtg tcgccagaac agcggcgcgc catctgcgag gcttttgagt ctgccaataa
     8521 tacccatggc ttaaacctga ctgctcataa atacccgggc ttacgcggca cactacaaac
     8581 cgcatccact gactgcgaca caattgtgga agctgcagca ctattacccg cttttgatca
     8641 ggcagtggaa ggcaaccgcc accaggatga ttacggttca ggtcttggga tggccgaaga
     8701 gaaatttcac tattatctcg atctcaatga ccgctatgtc tatttttatg agccggttaa
     8761 tgttgaatac tttgcgatga ataactggtc cttcctgcag tcaggaagta ttggtatcga
     8821 tcgcaaagat attgaaaagg tatttaccgg gcgtaccgta ttgtcgagca tttaccagga
     8881 tcagcgtact aaacagaacg tgatgagttt gctgacgccg gtgtatgttg cagggcagct
     8941 aaaagggatt gtgctgctgg atattaacaa aaacaatttg cggaatatct tttacactca
     9001 tgaccgccct ctcctctggc gttttctcaa tgtcacgcta accgataccg attcggggcg
     9061 tgaagtggcc aaattcagtg tgccacttc
//
LOCUS       DADKRT010000173         9061 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.176, whole genome shotgun sequence.
ACCESSION   DADKRT010000173 DADKRT010000000
VERSION     DADKRT010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9061
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.176"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..155
                     /locus_tag="JQ356_003463"
     CDS             <1..155
                     /locus_tag="JQ356_003463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4623446.1"
                     /translation="LQLCRNDSLMIGRESFSVDRITPDDGGCSYIRLRREGAGNVRAG
                     GYYEGA"
     gene            142..729
                     /locus_tag="JQ356_003464"
     CDS             142..729
                     /locus_tag="JQ356_003464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4623447.1"
                     /translation="MRGLENAIRNLNSLDTRMVPQASAWAVNRVAAKVVSVATRQVAR
                     NTVAGDNQVKGGPLKLVRQRVRVFKASPAGKMYARIRVNRGNLPAIKLGTTCRRAGDG
                     LKVGKYFFRGAFIQQLANGRWHVLRRLPEACFETGKDSKGRPRKNRLPVEVVKIPLAG
                     PLTQAFEDARDRIIAAEMPKQLGYALKQQLRIHLG"
     gene            726..1127
                     /locus_tag="JQ356_003465"
     CDS             726..1127
                     /locus_tag="JQ356_003465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4623448.1"
                     /translation="MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVW
                     LSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLID
                     TMIPLGFNYQRDNEMATWAMAEITYQITYTN"
     gene            1138..1878
                     /locus_tag="JQ356_003466"
     CDS             1138..1878
                     /locus_tag="JQ356_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707740.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4623449.1"
                     /translation="MTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKD
                     LQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTLATLAWRPGDSGQKKLVQLFDS
                     GEVCAFRIKYPNGTVDVFRGWLSSLGKTITSKEVMTRTVKISGVGRPYLAEEGAETVG
                     VTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATVKG
                     VKQGSVSIVGMTSDGEFVAVAAVTVSAP"
     gene            1937..2323
                     /locus_tag="JQ356_003467"
                     /pseudo
     CDS             1937..2323
                     /locus_tag="JQ356_003467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707739.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
     gene            2332..2660
                     /locus_tag="JQ356_003468"
                     /pseudo
     CDS             2332..2660
                     /locus_tag="JQ356_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308863.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
     gene            2632..5673
                     /locus_tag="JQ356_003469"
     CDS             2632..5673
                     /locus_tag="JQ356_003469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY4623450.1"
                     /translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAAGDAERSSARMQ
                     RFMERQTQAARQTMHAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQK
                     MREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQ
                     DYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGV
                     SSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRA
                     GWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEEFNRQLALTGHYAGVTVG
                     QLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDT
                     INQFKRLKDDPVNAAKALDNALHFLTATQLEQIRVLGEQGRSSDAARIAMSALAEETG
                     KRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYP
                     WTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNET
                     EAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYS
                     QQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKN
                     ELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGD
                     KQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKR
                     YWQELEVAQGDWKNGAMRAFQNFTADADNAVGTAEQMFTVAFSSAGNALATFCTTGKL
                     NFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVN
                     RPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIGINND
                     GTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR"
     gene            5673..6002
                     /locus_tag="JQ356_003470"
     CDS             5673..6002
                     /locus_tag="JQ356_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4623451.1"
                     /translation="METFRWKVRPDMNVVSEPKVVAVKLGDGYEQRRPAGLNNLLSTY
                     SVTIRVRKGEHPPLKAFLERHGGVRAFQWTPPYDWKPIRVACRKWSASVGALWVTVTA
                     DFEQVVN"
     gene            6002..6701
                     /locus_tag="JQ356_003471"
                     /pseudo
     CDS             6002..6701
                     /locus_tag="JQ356_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706643.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            6706..7449
                     /locus_tag="JQ356_003472"
     CDS             6706..7449
                     /locus_tag="JQ356_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4623452.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVRTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEAT
                     GLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHREWHASAFTGICNDLAAASTFV"
     gene            7386..7988
                     /locus_tag="JQ356_003473"
     CDS             7386..7988
                     /locus_tag="JQ356_003473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY4623453.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVA
                     IWMPGVGIMASNLLFSLGASMTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMV
                     AQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            8049..>9061
                     /locus_tag="JQ356_003474"
     CDS             8049..>9061
                     /locus_tag="JQ356_003474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY4623454.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKS
                     VLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRLTFSVQALVENTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMVWCR
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRK
                     AWDV"
BASE COUNT         2120 a         2127 c         2942 g         1872 t
ORIGIN      
        1 ttttacagct gtgtcgcaat gattcgctga tgattggccg ggagtctttc agcgtggatc
       61 gtattactcc tgatgacggc ggatgtagtt atatccggtt gcggcgtgaa ggagcaggaa
      121 acgtaagggc agggggatat tatgaggggg cttgagaatg ccatccgcaa tctgaacagt
      181 cttgataccc gtatggtgcc gcaggccagc gcatgggcag taaaccgggt tgctgcaaaa
      241 gttgtctcgg ttgccacccg gcaggtcgcc aggaataccg ttgcgggaga taaccaggtg
      301 aaggggggcc ccctgaaact ggtgcgtcag cgcgtccggg tatttaaagc cagtccggca
      361 ggaaaaatgt atgcccgtat ccgtgttaac cggggcaatc tgcccgccat taagcttggc
      421 acaacatgcc ggcgtgccgg tgacggactg aaggtgggga aatacttttt tcgtggtgcg
      481 tttatccagc agctggcgaa cggtcgctgg catgttctca ggcgtcttcc tgaagcgtgt
      541 tttgaaacag gaaaggacag taaggggcgg cccagaaaaa atcgtctgcc cgtggaggtt
      601 gtgaaaattc cgctggccgg accgctgaca caggcatttg aggatgcccg cgaccgcatc
      661 attgccgcgg aaatgccgaa acagctgggg tatgccctga aacagcaact gaggatacat
      721 ttgggatgaa caggcacaca caaatccgcc aggcagtact ggcaagcctg aagggcgaat
      781 gcggggggaa tgtcgtgctt tttgacgggc ttccggcatt tattgatgcg caggaactgc
      841 ccgccgtggc ggtgtggctg agtgatgcgc agtacaccgg aaaaatgacg gatgaggacg
      901 actggcaggc tgttctgcat attgccgttt tcgtccgtgc acaggcgccg gattctgagc
      961 tggatacgtg gatggagaac accatatttc cggccatgaa ggatattccg gtgctttccg
     1021 gactcatcga caccatgatc ccactcggtt ttaactatca acgtgataat gagatggcca
     1081 cctgggcgat ggcggaaatc acgtaccaga tcacgtacac gaattaagga ggtggcaatg
     1141 accacaccaa atccactggc aaagacgaaa ggtgcgggaa cgacgttctg gatgtacacc
     1201 ggcaagggcg atgcgtttgc gaaccctttg tcggacactg actggctgcg tcttgcgatg
     1261 gtgaaggatc tgcaacctgg cgaaatgacc gctgatgcag aagatgacac ttatctcgat
     1321 gatgaagatg cagactggaa aacgacaacc caggggcaga aatccgtcgg tgatactttg
     1381 gcgacgctgg cctggcgtcc gggtgacagc gggcagaaaa aactggttca gttgttcgat
     1441 tccggtgaag tctgcgcgtt tcgtatcaaa taccccaacg gtacggttga tgttttccgt
     1501 ggctggctga gttcactggg taaaaccatt acctcaaaag aggtgatgac ccgtactgta
     1561 aaaatcagcg gtgtggggcg tccgtatctg gcagaggagg gcgctgaaac cgtgggtgtt
     1621 accggactga cggtggcacc ggcatctgtc agtgtcaaag cgggagcaac caccacactg
     1681 acctttacag taaaacctga cggggccagt gacaaagcga tcagtgtgca ttcgtcagat
     1741 cctcagactg cttcggtgac cctgagcggg cttgtggcca cggtgaaagg cgtgaagcag
     1801 ggcagtgtca gcatcgtggg catgacctct gacggagagt ttgtggcagt ggctgcggtg
     1861 accgtcagcg caccataaca ggacgatact catcattgcc ccggttatcc ggggcttttt
     1921 gcatccggag aacatgatgt ttctgaaaca ggatacgttt aattatgaaa aacagtccgt
     1981 ggtgctcagt gagctgtccg ggctgcagag aattgaatat ctgacgtttg ttcagcagcg
     2041 aacggcaaag tttgatgcac aggagggaga actgccggag gctgaacgac agattgcttt
     2101 tctgcgtatg ggaatggata tcaatgcctg gctggtttcc cgctcactgt ggaatgctga
     2161 gcagtctcag gatgttgaga cgctttgagc atccattatg acaacatggt cgtatgatgc
     2221 gctgggcgcg ggggcggaga gggttctgtc gctgagcggt atggggacca ttgagaatgc
     2281 cggggatgat gatcatgagg cgctgacgcc ggaaaagtcc tgacgcggga aatgcagttt
     2341 gtcatgcggc ttgcccggga gttccggcgg gcagactggc ggcggatgct gtcggaaatg
     2401 tcggccactg agcttggtga gggggcgatt atttccggat gcagagcttc agtgatgtgt
     2461 ggatggatgc gcagtttgcc tcgctgaagg cattgatcgt gagaatggtg tccggcagca
     2521 gtgatgctgc ggtggctgat ttcagccttt taccggaaga gaacgggata ccggagcgaa
     2581 cggacgaaga actgatgcat cttggggaag gtatttccgg aggtgtgcgt tatggaccag
     2641 atagccaacc tggtcattga tttggggatt gatgcggcag agtttaaaaa tgaaattccc
     2701 cgtatcaaaa accttctgaa tggtgcagcc ggtgatgcag aacggtcttc tgcccgtatg
     2761 cagcgtttta tggagcgtca gactcaggcg gcccggcaga caatgcatgc ggcttcttcg
     2821 gctgcaacag cagcatcagc ccatgcgcag acggtggaga agaatgcacg ggctcatgaa
     2881 cgcatggccc gtgaggtgga acaaacccgt ctgcgcgtgg atgccctgaa tcagaaaatg
     2941 cgcgaggaac aggcgcaggc cagggcactg gcggaggcgc aggataaagc ggctgccgcc
     3001 ttttatcgcc agattgacag tgtgaaacag gccggtgcgg ggcttcagga attacagcgt
     3061 attcagcagc agatccgaca ggccagaaac agtggcgggg ttggtcagca ggattatctg
     3121 gcgctgattt cggagatcac ggcgaaaacc cgtgccctga cgcaggcaga ggaacaggcc
     3181 acccggcaga aagcggcgtt tatccgccag cttaaagagc aggcaacccg ccagaatctg
     3241 tcgtcttctg agttgcttcg cgccagggcg gctcagctgg gggtaagcag tgctgcagaa
     3301 gtgtatatcc gcaaaatgga gcgggcagga aaagccacac attcgctggg gctgaaaagt
     3361 gcggcagccc ggcgggagct gggggtgtta atcagtcaga tggcgcgcgg caattttggt
     3421 gcgctgaggg gatccgggat aacgctggct aaccgtgccg gatggacagg cgcactgatg
     3481 tcgccgaaag gcatgatgac tggcggcgtt attggcggac ttgtcgcggc ggtcctgggt
     3541 ctgggtaaag cctggcatga cggccggaag gagggcgagg aatttaaccg tcagctggcg
     3601 ctgacgggac attatgccgg tgtcactgtc gggcagttgt ggaaactcag ccgggccata
     3661 tccgggaatg gtatcacgca acatgcggca gccggtgcgc tggcacaggt ggtgggcagt
     3721 ggggcatttc atggaaacga tattggtatg gtggcgaaag ctgccgcaca gatggagcga
     3781 tcggttggcc agtcggtcag cgataccata aatcagttta agcggctgaa ggatgatcct
     3841 gtaaatgccg cgaaggcgct ggacaatgcg ctgcattttt tgactgccac tcagcttgag
     3901 cagatacgcg tccttgggga gcaggggcgg tccagtgatg cggcccggat cgccatgtct
     3961 gcgctggcag aggaaaccgg taaacgcaca tctgatattg ataataatct caatgcgctg
     4021 ggtagtacgc tgcaaacctt gtctgactgg tggaagcagt tctgggatgc ggccatgaat
     4081 attggtcgtg aagactcgct ggatgcgcag attgatgcgt tacaggaaaa aattcagcgc
     4141 gcgaaaaaat atccgtggac aaacgcctcc acacaggtgg agtacgatca gcagcgtctt
     4201 aacgatcttc aggagaaaaa acgccggaag gatttgcagg atgcaaaagc gcaggcagaa
     4261 cggaattacc aggagcaaca gaaacgccgg aatgctgaaa atgccgcgct gaaccggatg
     4321 aatgaaacgg aagctgcacg acatcagcgg gaaattgcgc gtattaatgc catgcagtac
     4381 gccgaccagg ctgtcaggga tgcggcgata cagcgtgaaa atgaacgtta cgaaaaagcc
     4441 attaagaaaa atacacgggc aacccgtaat gatgaggcca cccggttatt gctgcagtac
     4501 agtcagcagc aggcacaggt ggaagggcag attgctgctg ccagacagtc agcaggcatt
     4561 gccactgaaa ggatgactga agcgcataaa cagcttctgg ccctgcagca gcgcatcagc
     4621 gacctggacg ggaaaaagct gacggcagat gaaaagagtg tgctggcccg taagaatgag
     4681 ctgattcagg cgctgacgct gctggatgtg aaacagcagg agctgcagaa acagacagcg
     4741 cttaacgacc tgagaaaaaa aacggttcag ctgaccagcc agctggcaga caaagaacgt
     4801 gcactgcgtg agcagcacaa tctggatatt gccactgcag gtatggggga taagcagcgg
     4861 cagcgctacc aggcacagtt gcgcatccgg caggaatacc ggcaacagtt gcaacagctt
     4921 gagaatgaca gtcgccagaa aggcacttac gggacggagg actaccggag ggctgaggag
     4981 gtgctgaagg ggagcctgaa gcgacaactg aatgaaaaca aacgctactg gcaggaactg
     5041 gaagtggcgc agggcgactg gaaaaacggt gccatgcggg cgtttcagaa ttttacggcg
     5101 gatgcggata atgcggtggg aacggcagaa cagatgttta cagtggcatt cagcagtgcc
     5161 ggtaatgcac tggcgacatt ctgtaccacc ggtaagctga attttaaatc cttcacctct
     5221 tccctgttgt cagatatggc cagaattatg gcacagatgg ccatgatgca ggcggtaaag
     5281 ggcgtcggct ctttattcgg cttcacgact aatgctgatg gcggtgttta ccagtctgct
     5341 gatttgagtc gctacagtgg cacggtggtt aaccgtccga cgttttttgc ttttgcaaaa
     5401 ggcgcgggtg tgatggggga agcgggacct gaagccattc tgccactgcg tcgcggtgct
     5461 gatggtaagc tgggggttgt ggcggatact ggtggttcag gcatggtgat gtttgccccg
     5521 cagtacaaca tcgggatcaa taacgacggc acgaacgggc agataggtcc ggcagcactg
     5581 aaggtggttt atgacctcgg gaaaaaagcg gccgcggact ttatgcaaca gcaggcccgt
     5641 gatggtggcc ggttaagtgg agcataccgg taatggagac gtttcgctgg aaggtgcgcc
     5701 cggatatgaa tgtggtatca gagccaaaag tggtggcagt gaagctgggt gatggttatg
     5761 aacagcgtcg cccggcggga ctgaataatc tgctgtcgac ttacagcgtg acgatacgtg
     5821 ttcgtaaagg tgaacaccca cctttaaaag cctttctgga acggcacggt ggcgtccgcg
     5881 catttcagtg gacgccacct tatgactgga aaccgatcag ggtggcttgt cgtaaatggt
     5941 cggcaagcgt gggggcgtta tgggtgactg taacggccga ttttgaacag gtggtgaact
     6001 gatgcaggat atccggcagg aaacactgaa tgaatgcacc cgtgcggagc agtcggccag
     6061 cgtggtgctc tgggaaatcg acctgacaga ggtcggtgga gaacgttatt ttttctgtaa
     6121 tgagcagaac gaaaaaggtg agccggtcac ctggcagggg cgacagtatc agccgtatcc
     6181 cattcagggg gagtggtttt gaactgaatg gcaaaggcac cagtacgcgc cccacgctga
     6241 cggtttctaa cctgtacggt atggtcgccg ggatggcgga agatctgcag agtctggtcg
     6301 gcggaacggt ggtccggcgt aaggtttacg cccgttttct ggatgcggtg aacttcgtca
     6361 acggaaacag tgacgccgat ccggagcagg aggtgattag ccgctggcgc atcgagcagt
     6421 gcagcgaact gagcgcggtc agtgcctctt ttgtgctggc cacaccaacg gagacggatg
     6481 gcgcggtttt cccggggcgt atcatgctgg cgaatacctg tatgtggacc taccgttctg
     6541 atgagtgtgg ttacacgggc agggcagtgg ctgacgagtt cgacaaacca acgacggata
     6601 tccggaagga caaatgcagc aagtgtatgc gcgggtgtga gttgcgcaac aataccggta
     6661 atttcggcgg tttcctttcc atcaataaac tttctcagta aatccatgac acagacagaa
     6721 tcagcgattc tggcgcacgc ccggcgatgt gcgccagcgg agtcgtgtgg cttcgtggtg
     6781 agaacgccgg agggggagcg gtatatccct tgtgtgaata tttctgcaga gccggaggcg
     6841 tattttcgta tcgcaccgga agactggctg cgggcagaga tgcaggggga gattgtggca
     6901 ctggtccaca gtcatcccgg tggtctgccc tggctgagtg aggctgaccg gcggctgcag
     6961 gtgcagagtg atttgccgtg gtggctggtc tgccgggggg cgattcacaa gttccgctgt
     7021 gtgccgcatc tcaccgggcg gcgctttgag cacggggtga cggactgtta cacgctgttc
     7081 cgggatgctt atcatctggc ggggattgag atgccggatt ttcatcgcgg ggatgactgg
     7141 tggcgtcacg gtcagaatct ctatctggat aatctggagg ccacagggct gtatcaggtg
     7201 ccgttgtcat cagcacaacc gggcgatgtg ctgctgtgct gttttggttc atcggtgccg
     7261 aatcatgccg ccatttactg cggcgacggt gagctgctgc accatattcc tgaacaactg
     7321 agtaaacgag agaggtatac cgacaaatgg cagcgacgca cacactccct ctggcgtcac
     7381 cgggaatggc acgcatctgc ctttacgggg atttgcaacg atttggccgc cgcatcgacc
     7441 ttcgtgtgaa aacgggggct gaagccatcc gcgcactggc cacacagctc ccggcgtttc
     7501 gtcagaaact gagtgacggc tggtatcagg tgcgcattgc cgggcgtgat gcaggtgaaa
     7561 ccgaattgtc tgcccgtctt aatgagccgc tggcaaatgg tgcagtgatc cacatagtac
     7621 cgcgtctggt gggagctaaa agtggcggtg tgtttcaggc ggtgctgggg gcagctgtta
     7681 tggcggttgc tatatggatg ccgggggtag gaattatggc gagtaatctg ctgttttctc
     7741 tcggtgccag tatgacgctt ggcggtgttg cacagatgct ggcaccgaaa gccagaactc
     7801 cccgtacaca gacaacggat aacggcaaac agaacacctg tttctcctca ctggataaca
     7861 tggttgccca gggcaatgtt ctgccggttc tgtacggtga aatgcgcgtg gggtcacgcg
     7921 tggtttctca ggagatcagc acggcagacg aaggggacgg tggtcaggtt gtggtgattg
     7981 gtcgctgatg caaaatgttt tatgtgaaac cgcctccggg cggttttatc gtttatggag
     8041 catgacgaat gggtaaaggc agcagtaagg ggcatacccc gcgcgaagcg aaggacaacc
     8101 tgaaatccac gcagttgctg agtgtgattg atgccatcag cgaagggccg gttgacggtc
     8161 cggtggatgg attaaaaagc gtgctgctga acggtacgcc agtcctggac agcgagggga
     8221 agacaaactt ttccggtgtt acggtggtgt tccgcgccgg cgagcaggag cagacaccgc
     8281 cggaggggtt tgaatcttcc ggctcagaga ctgtgctggg tacggaagtg aaatacgaca
     8341 cgccgatcac ccggaccatc acgtcggcaa acattgatcg tctgcgcctg accttcagtg
     8401 tgcaggcact ggtggaaaac acctcaaagg gggaccggaa tccgtcggaa gtccgcctgc
     8461 tggttcagat acagcgtaac ggtggctggg tgacggaaaa agacatcacc attaagggca
     8521 aaaccacttc gcagtatctg gcctcggtgg tggtgggtaa cctgccgccg cgcccgttta
     8581 atatccggat gcgcaggatg acaccggaca gcaccacaga ccagctgcag aacaaaacgc
     8641 tctggtcgtc gtacaccgaa atcatcgatg tgaaacagtg ctacccgaac acggcgctgg
     8701 tcggcgtgca ggtggattca gagcagttcg gtaaccagca ggtgagtcgc aattatcatc
     8761 ttcgcgggcg cattctgcag gtgccgtcga actataaccc gcagacgcgg caatacagcg
     8821 gtatctggga cggaacgctt aagccagcat acagcaacaa catggtctgg tgtcggtggg
     8881 acatgctcac tcatccgcgc tacggcatgg ggaaacgtct tggtgcggca gatgtggaca
     8941 aatgggcgct gtatgtcatc ggccagtact gcgaccagtc agtgccggac ggatttggcg
     9001 gcacggagcc gcgcatcacc tgtaacgctt acctgaccac acagcgtaag gcgtgggatg
     9061 t
//
LOCUS       DADKRT010000174         9047 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.177, whole genome shotgun sequence.
ACCESSION   DADKRT010000174 DADKRT010000000
VERSION     DADKRT010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9047
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.177"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            196..1029
                     /gene="ppsR"
                     /locus_tag="JQ356_003475"
     CDS             196..1029
                     /gene="ppsR"
                     /locus_tag="JQ356_003475"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HAY4623455.1"
                     /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
                     NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRTANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
                     Y"
     gene            1185..2231
                     /gene="aroH"
                     /locus_tag="JQ356_003476"
     CDS             1185..2231
                     /gene="aroH"
                     /locus_tag="JQ356_003476"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HAY4623456.1"
                     /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK
                     ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARTSHMFLSPDKNGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTE
                     RLVEKLASAVDTRF"
     gene            2363..2554
                     /gene="hemP"
                     /locus_tag="JQ356_003477"
     CDS             2363..2554
                     /gene="hemP"
                     /locus_tag="JQ356_003477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HAY4623457.1"
                     /translation="MRYTDSRKLTPETDANHKTASPQPIRRITSQTLLGPDGKLIIDH
                     DGQEYLLRKTQAGKLLLTK"
     gene            complement(2558..3994)
                     /locus_tag="JQ356_003478"
     CDS             complement(2558..3994)
                     /locus_tag="JQ356_003478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HAY4623458.1"
                     /translation="MTLSFVTRWRDELPETYTALSPTPLNNARLIWHNIELANTLSIP
                     SSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTM
                     DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
                     TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLW
                     FSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
                     HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
                     FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW
                     FARYRGRLQQDEVSDSERQQLIQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEAL
                     RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
     gene            complement(4057..4770)
                     /gene="ydiV"
                     /locus_tag="JQ356_003479"
                     /pseudo
     CDS             complement(4057..4770)
                     /gene="ydiV"
                     /locus_tag="JQ356_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416222.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor"
     gene            complement(5016..5480)
                     /locus_tag="JQ356_003480"
     CDS             complement(5016..5480)
                     /locus_tag="JQ356_003480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
                     /protein_id="HAY4623459.1"
                     /translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
                     WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDKLLPGDL
                     VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI"
     gene            complement(5558..6307)
                     /gene="btuD"
                     /locus_tag="JQ356_003481"
     CDS             complement(5558..6307)
                     /gene="btuD"
                     /locus_tag="JQ356_003481"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HAY4623460.1"
                     /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
                     RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
                     RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEP
                     MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
                     EVLTPPNLAQAYGMNFRRLDIEGHRMLILTI"
     gene            complement(6307..6858)
                     /gene="btuE"
                     /locus_tag="JQ356_003482"
     CDS             complement(6307..6858)
                     /gene="btuE"
                     /locus_tag="JQ356_003482"
                     /EC_number="1.11.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional thioredoxin/glutathione peroxidase"
                     /protein_id="HAY4623461.1"
                     /translation="MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYE
                     QLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGE
                     GRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQ
                     RFSPDMTPEDPIVMESIKLALAK"
     gene            complement(6921..7901)
                     /gene="btuC"
                     /locus_tag="JQ356_003483"
     CDS             complement(6921..7901)
                     /gene="btuC"
                     /locus_tag="JQ356_003483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
                     /protein_id="HAY4623462.1"
                     /translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISLGDWF
                     TPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI
                     AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
                     TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE
                     ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL
                     PGCALAGASALLLADIVARLALAAAELLIGVVTATLGAPVFIWLLLKARR"
     gene            complement(8110..8439)
                     /locus_tag="JQ356_003484"
     CDS             complement(8110..8439)
                     /locus_tag="JQ356_003484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000997174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623463.1"
                     /translation="MNDDLERRVSCLESDVTEIKNNLITLTTRSESFATKSDVLEIRE
                     GLRLEMAESRQSLKSEMADLRQSLKVEMAEHRTELQKSFANQTWLLTGIVLSAMAVLV
                     AVVTVIK"
     gene            complement(8547..8909)
                     /locus_tag="JQ356_003485"
     CDS             complement(8547..8909)
                     /locus_tag="JQ356_003485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623464.1"
                     /translation="MKFHLDELKRMATLDNFARFLNESSTNEKCLSCGDTDMYMYLTN
                     IVEVGPEPKTAEECDLGTFVMLDYIGPFTGYPGYEGHDRENIHNYEFRLTCNRCGFVH
                     RYSARAFMNWVGKQGDEK"
BASE COUNT         2392 a         2397 c         2050 g         2208 t
ORIGIN      
        1 cgttgcgcaa acctgctcta ttcgacaatt tccacataaa ccatcggtat aaacgaaacc
       61 ataaaaatga aatgctgttt tcataaaaaa taaaattgaa ggttcatttt ataaaccaga
      121 cattacctcc tacgcttctg tgcgttttta atttatgctt tcatagaatt atgtctgcat
      181 cacgggaaga acaaaatgga taatgctgtt gatcgccacg ttttttatat ttctgatggt
      241 acggcaataa ctgcggaggt attaggacac gcagtaatgt cacaatttcc cgtcactatc
      301 agcagcatta cgctgccgtt tgtcgaaaat gagagccgtg cacgggcagt gaaggatcag
      361 attgacgcaa tttatcacca gacaggtgtg cgcccgctgg tcttctactc catcgtgttg
      421 ccggagattc gcgccatcat cttgcaaagt gaaggctttt gccaggatat cgttcaggcg
      481 ctggttgccc cgctacaaca agagatgaaa ctggatccaa cgccgattgc tcatcgtacc
      541 catggcctta accctaataa tctcaataaa tatgatgcgc gcattgcggc gattgattac
      601 acccttgccc acgatgacgg catttcgttg cgcaatctgg atcaggctca ggtgatcctg
      661 ctcggtgttt ctcgctgtgg taaaaccccc accagtctgt atctggcaat gcaatttggt
      721 atccgcacgg caaactaccc ctttattgcc gacgatatgg ataatctggt gctacccgcg
      781 tcgctcaaac cgcttcagca taaattgttc ggcctgacta tcgacccgga acgtctggcg
      841 gcgattcgcg aggaacgtcg ggagaacagt cgctatgcct cgcttcgtca gtgcagaatg
      901 gaagtcgcgg aagtggaagc cttgtaccgt aaaaatcaga tcccgtggat taacagtacc
      961 aattattcgg tagaagagat tgccaccaag atcctcgata tcatgggcct tagtcgccga
     1021 atgtactaga gaactagtgc gctggtttgt tttttgttat catgctaacc acccggcgag
     1081 gtgtgacaca cctcgcactt gaaatcagct gcgattggtt tatcgtgatg cgcatcactt
     1141 cccggtagtc ctgccgtaga agcaacaaat ttctgagact tgtaatgaac agaactgacg
     1201 aactccgtac tgcgcgtatt gagagcctgg taacgcccgc cgaactcgcg ctacggtatc
     1261 ccgtaacgcc tggcgtcgcc acccatgtca ccgactcccg ccgcagaatt gaaaaaatac
     1321 tgaatggtga agataagcga ctgttggtca ttattggccc ctgctcgatc cacgatctca
     1381 ccgctgcaat ggagtacgcc acccgtctgc agtcgctgcg caaccagtac cagtcacggc
     1441 tggaaatcgt aatgcgcacc tattttgaaa aaccacgaac tgttgtcggc tggaaagggc
     1501 taatctccga tccggattta aacggcagct atcgggtaaa tcacggtctg gagctggcgc
     1561 gcaaattact tttacaggta aatgagctgg gtgtccctac cgcgactgag tttctcgata
     1621 tggtgaccgg tcagtttatt gctgatttaa tcagttgggg cgcgattggc gctcgtacta
     1681 ccgaaagtca gatccaccgc gaaatggctt cagcactctc ctgtccggta ggttttaaaa
     1741 atggtaccga tggcaacacg cggattgccg tggatgctat ccgcgcagcc cgcaccagcc
     1801 atatgttcct ctcgccagac aaaaatggtc agatgaccat ctatcagacc agcggcaacc
     1861 cgtatggcca cattattatg cgtggcggca aaaaaccgaa ttatcatgcc gatgatatcg
     1921 ccgcagcctg cgatacgctg cacgagtttg atttacctga acatctggtg gtggatttca
     1981 gccacggtaa ctgccagaag cagcaccgtc gccagttaga agtttgtgag gatatttgtc
     2041 agcaaatccg caatggctct acggcgattg ctggaattat ggcggaaagt ttcctgcgcg
     2101 aaggaacgca aaaaatcgtc ggcggtcagc cgctcactta cggtcaatcc attaccgacc
     2161 cgtgtctggg ctgggaagat accgaacgcc tggtcgaaaa actcgcctct gcggtagata
     2221 cccgcttctg aatgcgtgcc catgcctgat gggatgggca tttctgcgca acttgttgtc
     2281 ttctcaacac attactgctt gctctggcct gccataatat tgataataag aatcattgtt
     2341 atatcaatta ttattaattt ttatgcgtta tacggatagc agaaaactca cgcctgaaac
     2401 ggatgccaat cacaagaccg cttccccgca gcccatccgg cgaattacca gccagacact
     2461 gttaggtccg gatggcaaac tgattatcga tcatgacggg caagaatatc tgctccgtaa
     2521 aactcaggct ggcaagctgc tgttaactaa gtagccttta actcgagcag ctgacttcca
     2581 gccgtttacc ccagtcaggt ggacgactga catagtcatc atctctgtcg ctgaaaggat
     2641 ttcgcaacgc ctcatgcagg cggtgcaatt ccatcatatc acccttttct gccgcttcaa
     2701 tcgcccgttg cgccaaccag ttgcgcaata ccagagctgg gttaacgctt tgtatcagtt
     2761 gctgacgctc actatcgcta acctcgtctt gttgcaaacg cccccgataa cgggcaaacc
     2821 agtcatcaaa tgccgcacga tcaataaact catcacgtag cggtgacgcc gcgctgtgct
     2881 gctcggtcag actcagcatg cggaatgtgc gggtataatc gctgcgctct cgcgccatca
     2941 gactgaataa ttcattcagt agcgcgttat cctctttttg ctccgtcatg aagcccagtt
     3001 tctgccgcat ccgttgtcca taatgcgtca acaaaacctg ctgatagctg tccagggcct
     3061 cattcagggc atctacggca acaaatggtg acaatgtctg cgccagacgc tgtaaattcc
     3121 acaacgcgac agcaggttga ttatcaaagc tataacgccc ttgatgatcc gagtgattac
     3181 aaataaaacc gggttcgtaa tcatcaagaa aaccaaacgg cccgtaatca agcgtcagtc
     3241 ccagcagcga catgttgtcg gtattcatca ccccatgtgc aaagccgacc gtctgccatt
     3301 gggcaattaa cgacgcggta cgtgcgacaa catcgctaaa ccagagacgg tatttgtcct
     3361 catcatcttc aagatgtgac cagtaatgac gaatagcaaa gtcagctaac tgacgaacct
     3421 tttccgactc gcggcggtag taaaaatgtt cgaaatgacc aaagcgcaga tgacttggtg
     3481 ccacacgcat cagcatcgcg cctggctccg ccgtttcccg atacactggc gaatcgctgg
     3541 tgacgatact taacgcgcgg gtcgtcggaa tgcccagata atgcatcgcc tcactggcga
     3601 gactttctcg tatcgtcgaa cgtaaaaccg cccgtccatc acccattcgc gaataaggcg
     3661 tcaggccagc acctttcaga tgccagtcca ttgtagtgcc atcagcaagc agttgttcgc
     3721 cgagtaaaat gccgcgccca tcacccagtt ggcccgccca gacgccgaac tgatgaccac
     3781 tgtaaacctg cgccagtggt gacataccag gcagtagggc ttcgccgccc cagacacctg
     3841 cgccattttt aaacagcgac gatggaatac tcagcgtgtt agccagttcg atattatgcc
     3901 aaatcagccg ggcattattt aaaggcgtag gggaaagtgc tgtataggtt tctggcaatt
     3961 catcgcgcca gcgggtaaca aaagacaggg tcatagatcc tcctgtttga tagtgtagac
     4021 ggttactctc gtcttaaaca ccagcaaaca gaagggttat cgctgaacca acgtcgttat
     4081 ctgatttatg ggaacggcag gccacaggca tccctggaga gcatggaaat cgaagggggt
     4141 aatctgtgcc aatatttctg ccgtatcaat gcctcccgca atgatgcaat tgcaacaagg
     4201 ggaaatttgc gcctagatcg cacgaataaa cggttcgaag gagcggtgcg tgatttgttg
     4261 ctgaataaaa cttttatcca gcatgacgcg ggtgaaaaga ccatcaaaaa ccgctttcat
     4321 tgtgctattg cctgctccca aattacctaa cacaagggga tacacttgcg ataaggataa
     4381 aagaccgcga ttatcttttc cttcattgag atgcgggtaa ttctcattaa tcaacagttc
     4441 aataaacgga tattttaata gttcgcctgc gtaattatcc ctctctaata ataatgtagc
     4501 cacttgtggc gttaaattaa gccaggcaaa gagtttatgt tgaataaaaa aatgttggca
     4561 tgattttagt aattccaact gctctgaaaa taattgccaa tgttgctcct cggtaagttg
     4621 cgctataacc cgactcgtcg ggatacgcac cgtgccatct tcactggaga aatgggtaat
     4681 taactcaacg ccgacaagga cttgctggtt atctcttatc ggcaggaaat agcaatcaga
     4741 atgataaaga ttctccaaaa aaatcttcat ggtaaccgtc cctctcgaag gatgtttttc
     4801 agtatccggc taaaagggat aaggccataa gacataacaa ttacagaagg agtaactttc
     4861 atttgttcca tgttaaccac tttttcaggg gtcttttttt agattatcct gattataaac
     4921 gaataatcca tttacggaat ttttgtctgc aaaatactac tgtattcagg agtaaatgga
     4981 cggcgatgta tcatcgccgt ccatttttcg acatactaga ttcgtctcgc ctgccagaaa
     5041 tttttctgcc aatagacatt atcaagtgag gaacgcatca ctcccttgct ggtagaggcg
     5101 tggataaatt ggttgttggt atcgtaaata cctacatgca aaccattttg tccggacccc
     5161 gttttgaaaa agaccaggtc acctggcagc aacttgtctt tatcaatttg cgtgccaata
     5221 gaggcttgtt gtttggtttc acggggcagc tgcaaatcga aacgatcgcg catcgtcaca
     5281 accacaaatc ccgaacagtc cacaccgcgc cgcgtcatgc caccataacg atacggcgtg
     5341 ccatgccagc tttgtagctg gtcgttcaaa ccggcaataa cggtaatcga atcagaaagt
     5401 ctggcatttg gcggcggtgc tttatggtgg ctacacccgg ccagaaacag tgctgtgatc
     5461 aaaataaggc agaaacgcat tccgtacggt tcctctgttt tttattcttg cattaattta
     5521 gcgtcgtaat tacccgattt tcaagatact aatgaaatca gatggtcaaa atcagcattc
     5581 tgtgaccttc gatatccaga cggcgaaaat tcatcccata ggcctgcgcc agatttggcg
     5641 gcgtgagcac ctcttctctg cgtccactgg ccagcatttt tccacctttt agcaaccacg
     5701 cccgatgcgc atgacgcaac gtgtggttga gatcgtgact gctcatcaca atcgccagtc
     5761 cttgctgaca cagcgcgctc agaattttgt ctaacgcact ttgttgcgca acatcaagac
     5821 tgttcatcgg ctcatcaaga agcagcaatt ggcctgcggg attggcttgt ggtgtgattt
     5881 gcaacaccac cgcagcaaga cgtacgcgtt gccattcacc gccggaaagt tgattggtgc
     5941 tacgaccgag tttgtcatca agagccagcg cccctgcgac atcattcagt agttcggtac
     6001 gcgttttatc gtgctgatgc agtgtcaggt agtgccagac cggcattgca aacggcggcg
     6061 tctgctgttg tgaaagatag gcgcgatgca gcgcgagttt tgttgcggac catgcttcca
     6121 ggggttgccc cgcgaactga atgcttccct taccgctggt cattccggcc attcgtgcaa
     6181 gcaaggtact cttacccgcg ccattcggcc ccaccaggtg caggatctcc ccagcccgaa
     6241 cctcgccaga aagtggcccc aggcgggtag attccgcaac atcctgtaac tgcatcacaa
     6301 tagacattat tttgccaacg ccagtttaat gctttccatc acaatggggt cttccggcgt
     6361 catatccggg gaaaaacgct ggatgaccaa tccgtccctg ccaactaaaa atttctcaaa
     6421 attccataaa atatcatcag ggtacagcgg tgcacgacct ttgctgacca tacgggcata
     6481 gaatccgctc tcttccggcg cgactgcggt cggcgctgcg gcaatcaatt tttgatacag
     6541 cggatggcgt ccttcgccgt taacttcaat cttactgaac atcgggaacg tcacccccca
     6601 tgtggtggta cagtaagttt taatctcttc atcgctgccc ggttcttgtt ccagaaactg
     6661 gttgcacggg aatcccagca ccacaaaacc tcgatcggcc caggctttct gaatattctc
     6721 caactgctca tattgcggcg ttaagccaca ctttgaggcg acattgacaa tcaacagcac
     6781 attaccggcg tacttctcca gcgtggtcac ttcaccgtcg atatctttca ctacggtcgt
     6841 cagaatggaa tcttgcatcg tttctcctgg gtgtggtcag taaaaatctt agcttttaat
     6901 catagaccgt ctttttgcgg ctaacgtctt gcttttaaca ataaccagat aaacaccggc
     6961 gcacccaacg ttgcggtgac cacgccaata agcagctctg cggcagctaa tgccaggcgc
     7021 gctacaatat cggccagcag caatgcgctc gcccctgcca gcgcgcagcc gggaagtaat
     7081 acgcgatgat cggttaaacc acacaaccga agaatatgtg ggatcaccag accaataaag
     7141 ccgatagcac ccgccagcgc cacactgacg ccaaccatcc agccggtcgc ggccaccagc
     7201 acattgcgcc agaaccacag gggtaaaccc agttgccgcg ccgagatctc gccaagtgct
     7261 aacatattca tcggcctgga ctgacaacag atccacaaca acacggggat caatgccagc
     7321 atcagccagc tttgccgcca gtctacgccg ccaaaaccgc ccatcatcca gtacatcagc
     7381 tgacgtaaat caacagaggt ggaaaagtag atagcccacg tcattagtgc gctacagata
     7441 atccctaatg caacgccagc cagcaataac cgactggtcg aaagatgacg acgggcgaaa
     7501 cgtaagagta ttaaagtaat gataagcgcg ccagcaatcg cacacagccc tagcgcccag
     7561 ttggggagtt gcccttgccc aagcaatacc gcggcgataa gccccacgcc tgcgccgtta
     7621 gagacgccaa gtagtccagg ttctgccaga ggattttcaa acaacgcctg cattacagcg
     7681 ccggatatag ccagcgccgc accaaccaac aatacagcca gcgtacgtgg caggcgaatt
     7741 tgccagacga acagttcgcc acgaggagta aaccagtcac ctagcgagat ccattgttca
     7801 ccggcgcaaa ggcttaaaag aagcgccagc agcatcaaaa ctgacaggca taataaccag
     7861 cgaatatttt gtcgctgttg ttggcgggca agtgtcagca tggtatccgt tctgctgaag
     7921 tgtcatggcg ttgattttac ggtgactctt cgacagtgaa aagaaaaaag gccgcagagc
     7981 ggccataaac acaagtaaaa atcaacaagt tagataatta tcaaagactt acagacacac
     8041 aaaaacacag ccaaccacaa caaataacag ggatgtggtc actttgtgga tcatatcgcc
     8101 gccataaatt tacttaataa cagtaaccac agccacaagc acggccatcg cagacaggac
     8161 aatacctgtg agtaaccaag tctgatttgc aaatgatttc tgaagttcag tacgatgctc
     8221 agccatctca actttcagag actggcgtaa atcagccatc tcagacttca gggattggcg
     8281 cgattctgcc atctcaagcc tcaacccttc gcgaatctcc agtacatcag atttggtagc
     8341 aaaggattcg cttcttgtgg tgagagtaat caggttgttt ttgatttcag tcacatcact
     8401 ttccaggcaa ctgacccgcc gttcaaggtc gtcattcatg ccatcacctc catcattacc
     8461 acttcctgtt acttggttgt tggatacatt ataggcattc tctttctttt ttctgaaccg
     8521 cgaaatatgt gcaacattct ctgccatcac ttctcatcac cctgcttgcc tacccagttc
     8581 ataaaggccc gggccgagta acgatgaaca aacccacatc tgttacaggt aagtcggaat
     8641 tcatagttat ggatattttc ccgatcatgt ccctcatatc ccggataccc agtaaatgga
     8701 ccgatgtaat caagcataac aaaagtgcct aaatcacact cctcagcagt tttcggctca
     8761 ggccccacct caacaatatt cgtcaaatac atgtacatat ccgtatcgcc acacgacaaa
     8821 catttttcat tcgtagacga ctcattgaga aaacgcgcaa aattatcgag cgttgccatt
     8881 cttttaagtt catctaaatg aaacttcact cttaagcacc tcctagtgga ttaaacctca
     8941 ccgcatcctg caggtaatcc ggcgcaagat gggcataaat catcgttgtc tgaatctttg
     9001 cgtgccccag aattttctgg agcgtcagaa tattgccgcc gttcatc
//
LOCUS       DADKRT010000175         8892 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.178, whole genome shotgun sequence.
ACCESSION   DADKRT010000175 DADKRT010000000
VERSION     DADKRT010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8892
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.178"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            114..359
                     /gene="tnpA"
                     /locus_tag="JQ356_003486"
     CDS             114..359
                     /gene="tnpA"
                     /locus_tag="JQ356_003486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HAY4623465.1"
                     /translation="MDGEPDHVHLLINYPPKLAISSLVNSLKGVSGRLLRRDRPDIAV
                     RYYYKGVLWSPGYFANSCGGAPISVIRQYIEQQQTPG"
     gene            419..493
                     /locus_tag="JQ356_003487"
                     /pseudo
     CDS             419..493
                     /locus_tag="JQ356_003487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709516.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(490..1813)
                     /locus_tag="JQ356_003488"
                     /pseudo
     CDS             complement(490..1813)
                     /locus_tag="JQ356_003488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312649.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-alpha-glucosidase"
     gene            complement(1813..3429)
                     /locus_tag="JQ356_003489"
     CDS             complement(1813..3429)
                     /locus_tag="JQ356_003489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HAY4623466.1"
                     /translation="MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTD
                     PNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFI
                     NAMGMIWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDK
                     KLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGGWV
                     YTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGG
                     FALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFI
                     SPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLIDQVLPQNWIPMFSNHADMMLTQIAI
                     GLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQA
                     AGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVII
                     GLHVSQLREQLDSLINSHQSAENVAITEAV"
     gene            3725..4441
                     /locus_tag="JQ356_003490"
     CDS             3725..4441
                     /locus_tag="JQ356_003490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY4623467.1"
                     /translation="MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRK
                     AIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMP
                     APPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEY
                     IEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMF
                     RNASEYQVEYHLRRLHPEKS"
     gene            complement(4438..6099)
                     /locus_tag="JQ356_003491"
     CDS             complement(4438..6099)
                     /locus_tag="JQ356_003491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HAY4623468.1"
                     /translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
                     HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     IGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
                     AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHD
                     LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
                     EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGD
                     ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
                     GFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKS
                     GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
                     ALAFANNLHPTSGAPALSYATVYPLVMFLRIITPQLLAVLFWSIG"
     gene            complement(6295..6723)
                     /gene="ibpB"
                     /locus_tag="JQ356_003492"
     CDS             complement(6295..6723)
                     /gene="ibpB"
                     /locus_tag="JQ356_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709512.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HAY4623469.1"
                     /translation="MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
                     MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
     gene            complement(6835..7248)
                     /gene="ibpA"
                     /locus_tag="JQ356_003493"
     CDS             complement(6835..7248)
                     /gene="ibpA"
                     /locus_tag="JQ356_003493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HAY4623470.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
     gene            7554..7886
                     /locus_tag="JQ356_003494"
     CDS             7554..7886
                     /locus_tag="JQ356_003494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418143.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY4623471.1"
                     /translation="MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSHVEKSEANAQATNAVI
                     PPARMPDN"
     gene            complement(7888..>8892)
                     /locus_tag="JQ356_003495"
     CDS             complement(7888..>8892)
                     /locus_tag="JQ356_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418144.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HAY4623472.1"
                     /translation="PKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDI
                     TAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQ
                     KQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKV
                     PELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPR
                     HWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWL
                     GFVLDNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR
                     "
BASE COUNT         2266 a         2346 c         2223 g         2057 t
ORIGIN      
        1 acctggtctt tgtcaccaaa taccgacgtc agatttttga ctatgacgcg acagaaaaac
       61 tacgcactta cttttcaaat gtatgtgctg attttgaagc tgaactggtt taaatggatg
      121 gcgaaccaga tcacgtccat ttgttaatta actatcctcc caaactggcg atatccagtc
      181 tggtaaacag cctcaaaggc gtatcgggta ggttactgcg acgagatcga ccagatattg
      241 cagtcaggta ttactacaaa ggcgttttgt ggagtcctgg ctattttgcc aatagctgcg
      301 gaggtgcgcc aatatccgtc atccgccaat acattgaaca acagcaaaca cctggttagg
      361 tggaaaaccg cgccttatat ccccgccctg aaggacgggg ttttacggcg caccggataa
      421 atttggttat gcgccgtcag ccgtgctaaa gaatacggac cagcacccaa cggatgccag
      481 tccacacaat taacgtaact ctggccagta cgctttgttg gcctccagca actcatccag
      541 aatagctttg gcgaccgagg cgctcggtac cgttttcgat aacgtaatcg cctgccacag
      601 gtgctgatat gaacgctgtt cccaggcgtc cacgaccagt ttttccaccg ccacttgctg
      661 actcattaac cctttctgaa actgcgggat atcgccgacc accagtggtt ctggtccgtt
      721 gtgcccgacc agacacggga tctcgaccat cgcttcatca tcaaagttat ggattgcccc
      781 gttgttaggc acaatcagca acatccgctc ctgagtgttg aaggcaattg ccgccgccag
      841 atcgacgatg tatgacgcat gttcgtcaat ctccagcttg gccgccgctg aatttcctgc
      901 cgctgtaatg gcgcggcaag catcgaaaac ctgtttctcg cgatgttcca ttcacctcat
      961 tcgcgcgggt atgttcaggg ttggaatgct gaacaacata atccgggaag agataatatt
     1021 tcagataggt gttcggcaat gtatccgggt ccagtgcctg gacatcccgc gcttttgcat
     1081 aggtgtcgtt ccagctcgct tcagtatgtg tatcttgctg cggtggaaca taaccgtgct
     1141 tagagacata ttgccgcagc tggggcatca ggtcgttgcc ctgcaaatct tcaattgatg
     1201 tccaccagcc aaagtggttc aggccgtagt agcgcacgcg catctgtttg cgatcttgca
     1261 gcccaacaat ttgcgccatc cggctttcaa taccgattgg catgtcacag atgttgagga
     1321 ttttcgcatt cgggcgcaga cgacgcgtgg cttctgcgac aattgctgcc gggttggagt
     1381 agttgagcat ccaggcattt ggtgaatatt tttccatata atccaccagt tccaggacgc
     1441 cgccaatgga acgcatgccg tacgctattc cgccgggtcc gcaagtttcc tgaccaacaa
     1501 cgccgtggcg cagcgggatt ttttcatcca gttcgcgcat cgggtatttg ccgacgcgga
     1561 tgtgcgccat gacaaaatca acgtcgctga atgccacttc aggatcggtg gtgtaactaa
     1621 acgcaatgtc cggcgctttc tctttaagga tgactttaca ggcttcggca atcacttcct
     1681 gccgcgcacc atcgttatca taaaatttca gtgcacgaag cgggaaacgg tcctgattcg
     1741 ccaggagcat caacacgatg cctggcgtaa aggtgcttcc accgcctgcg acaaccactg
     1801 agaatttggt cattatactg cctccgtaat ggcaacattt tctgctgatt gatgagaatt
     1861 aattaagcta tcgagctgtt cacgcagctg ggatacatgc agaccaatga tcacctgaat
     1921 ggcatcgcca ctacggaaga cgccgtgcgc tcccagcttt ttaaagactt cgtcatccag
     1981 cgtttgtgac atgtcatgca gtgcaatacg taaacgcgtc gcgcaattgt taatgctgga
     2041 gatattgccg accccgccca gggcttgcag gataccggca gcctgatcca gctctttttt
     2101 tggctctgca gcggtggttt ggcctcgcga ggctttgtat tcggcttttg agtagagttt
     2161 cacttccgca tcttcacgtc ccggcgtgca catgttgaat tgcagaatca gtgtgcggaa
     2221 aaccacgaag tacagcaggg taaagcacaa cccaatggcg atttgggtca gcatcatatc
     2281 cgcgtggttg ctgaacatcg ggatccagtt ttgcggtaaa acctggtcaa tcagacctcc
     2341 gcccatgttg cccaccacac caaagagata catcacggtc gacattgagg ccgccagcac
     2401 ggcgtgtacc gcaaacagca acggtgaaat gaacaggaag gtaaattcca gcggttcggt
     2461 aattcccacc agcatggcgg ttaaggttgc gggaatcagc aagcccgcca cttttacccg
     2521 attttccggt gcggcagtga agtacatcgc taaagaaatg cccacggcac caaagatttt
     2581 tgagttaccg tgcagggcaa aaccgccttc cgggaacaac gatttcagcg gctcggcgct
     2641 cagactgaac tcttgcagat gctgcgccca gtacatctga atgccgcctt caacagctgc
     2701 cggaccaaag ataaactgtc cgtagatgaa gtggtgtaaa ccggttggga tcagaatacg
     2761 ttcgaggaag gtgtaaaccc accccccaag cgcacccgcc gaacgcagga acgcttgcag
     2821 agattcaatc cccatttgta cttttggcca accgagcaac gtcagccagg cacaggggat
     2881 catcaccagg aaggcgataa tcaccacata agacgtcccc tggaaaatgc cgagaaaaac
     2941 cggcagtttt ttatcgaaca gacggttatg cagcgccgtc acaatgccgg aaatgataat
     3001 tgcgccgata atgctggtat cgagggtttt aatcccggcc atcattgtca gaccgctacc
     3061 tgccaccgcg tcctgagtga aatcgacgcc gaagtagctt ccccagatca ttcccatcgc
     3121 gttgatgaaa tagttccagg tcaggaaact caccatcacc gccagacaag cacgcccctg
     3181 cgcttgctta gcaaggccaa tgggtaaacc gacagcaaaa atcagcggca tattacggaa
     3241 taccgtccaa ccgccctctt caataatgtg tacgatttgc gcgaataaac tgttcggatc
     3301 ggtcagtgat tccccgacaa acatcgggtt ttgcagcaag atggcaagac ccaccacaat
     3361 cccggcgaag ggaaacagca gcactggcgt gaacatcgcg ccgccaaagc gttgaatttg
     3421 actgagcatt tccacattct cttttctcaa ttctgtaagt aggaagcctg attggttatg
     3481 cggcaggcct ggagcgagga taggaagatg cgatcggcag aacatgacga cccaatggga
     3541 ttcgtgatcg ctttcatgct tttcgttggg cggtagagat ctacgttttc gcgaaaaagt
     3601 agacatctgt gagcactggt acacagcatc gaacacatct ttaaaaaaaa gatgtttttt
     3661 caatcgatta agcagaactt gtgggcgcat tacccgggct tgcaggcaaa aaagagatct
     3721 agagatgatc tacaaaagca ttgcggagcg gttaagaatt cgacttaatt ccgcggattt
     3781 cacgctaaac agccttcttc ccggtgaaaa aaagttggcg gaagaatttg cagtatcccg
     3841 gatgaccatc cgtaaagcga ttgacctgct ggtagcgtgg gggctggtgg tccgccgcca
     3901 cggcagcggc acttacctgg tgcgcaaaga tgtgctgcat caaaccgcca gcctgaccgg
     3961 actggtggag gtgttaaaac ggcagggaaa aacggtcacc agccaggtgc tgatttttga
     4021 aatcatgcct gcgcctccgg ccattgccag ccagttacgg attcaaatca acgagcagat
     4081 ctacttctcc cgtcgcgttc gttttgtgga agggaaaccg ctgatgctgg aagacagcta
     4141 tatgccggtt aaactgttcc gtaatctttc gctgcaacat ctggaagggt cgaagtttga
     4201 atatattgaa caagagtgtg ggattttgat tggcggtaat tatgaaagcc tgacgccggt
     4261 gctcgccgat agactgctgg cgcggcaaat gaaggtagcg gaacacacgc cactgctgcg
     4321 gatcacctcg ttgtcatata gcgagagcgg ggagtttttg aattattcag tgatgttcag
     4381 aaatgccagc gaataccagg tggagtacca tttacggcga ctccacccgg aaaagagtta
     4441 accgatactc cagaagagca ccgccagtaa ttggggggtg ataattcgca gaaacatcac
     4501 taacggatag acagtggcgt aagagagcgc cggcgcacca ctggttggat gaagattatt
     4561 agcaaacgcc agcgccggag gatcggtcat ggaacctgcc agcatcccgc acatggtcag
     4621 gtaattcatt ttggctaaca tccgcgccag aatgccaaca gtaatcagcg gaacggcggt
     4681 gatcagggca ccataaccaa tccagcttag cccttcgcca ttgaccaggg tattcacaaa
     4741 atccccacca gatttcagac caacgaccga gaggaacagc acgatcccca gctcccgcag
     4801 cgcgaggttg gcacttggcg gcataaacca gtacagcttg ccgatactgc cgatacgccc
     4861 gaggatcaac gccataatca gcggaccgcc cgccagcccc agtttcaacg cggccgggaa
     4921 cccaggcaca aagacgggaa tagaacctaa caatacgcca agcccgatgc caataaacac
     4981 tggcagcatc tgaacctgtt gcagtttttg ctgcgcattc cccagcacat tggcaacggc
     5041 atcaattgcg gacggacgcc ccaccagatt gaggatatcg ccgaactgca ggctgatatc
     5101 gccactggcg accagttcga ccccggcacg gttcaggcgc gagataacaa cgtcatagcg
     5161 ttctttaaag tgcaggtcgc gaatacgttt tccgagcacg ttttcattgg tgaccaccac
     5221 acgctcgacg cgcaaatcag tgcctttcgt ggacagcgaa gtatcgacct cctgaccaat
     5281 caccagttgc gcattatgta aatccgctgg ctgccccacc agatgcagca aatcgcccag
     5341 ttggataatg gtatctggcg aaggaacttt tagggtttct tcgcgtttca gacgcgagca
     5401 gataattttg tcgccgttga gaatcggtac atctttaata gctaaatcat gcaggttagg
     5461 gttctcaacg cgaatattga tagtcttgat cagcgcgccg ccattggtgc gtgaagactc
     5521 gtgctgctga gcttctgtct cgacattgac gcggaaaata acccgcaaca tccacatggt
     5581 gaacaaaatc ccgcaaatgc cgaatggata cgccatcgcg taactcatcc ccatctgatc
     5641 gaccatttcc attggtgtac ccaggtcgcg caagatctgc tgccctgccc ccagcgctgg
     5701 cgtattggta accgcaccgg agaaaatccc cagcactacc ggcagtggaa tatcaaacag
     5761 tttatgcagg atggcggtaa ccagaccacc gatgatgacg atcagaacag caaacaggtt
     5821 gaggcgtaat ccggagacgc gcaatgaggc aaagaagccc ggccctactt gaatcccgat
     5881 ggtataaacg aacaggatca ggccaaattc ctgaataaca tgcagcatat cgctacttaa
     5941 tgtcatcccc gcctgagaaa caaaatggcc gacgatgatc ccaccaaaca gcacgccgcc
     6001 aatacctaat cctatgccgc gaaatttgac gttgccgata aacaaaccga cgactgccac
     6061 caaagccaga atactgaccg ttaatgctat atcactcatc gtccatttct cttgagataa
     6121 cattttaatt gctacggatt atggctgaat cggtgaagca gatttgcctt atagcgcaca
     6181 ttatcacggg aaagaacgtg ccgaaatatc ttaaacagtc gaaatttaac gcattgttga
     6241 agaagaaaga caaaaaaagc cccaccagaa tggcggggca aagagaatag ctagttagct
     6301 atttaacgcg ggacgttcgc tgatagcgat acgctgcgct gcgatgggtt caggctcatt
     6361 acgaattaaa tcaatatgca gtaaaccgtt tacgaaggtt gcgccagaga cttccatatt
     6421 ttcagccagc gtaaagctca ggctaaatgg ctgattcata agcccttgat gcagccattt
     6481 tttctcttct tttggctgct ccggcgtgcc ttttacgctc aggcgcgtac cttccagttg
     6541 aatctctaaa tcttcctgac ggaaacctgc cagcgcaagg gtaatgcggt agtggttatc
     6601 gtcgcttttc tcaatgttgt acggcgggaa gctctggctt tcaccggcgt tttgcagtgc
     6661 gttggccagt ttgtcaaaac cgatccattg acgcatcagt ggggataaat cgaagttacg
     6721 catagtcatt tctccttcta agaagcgagt aagtacctgc aaatccgaag attcgcatat
     6781 gctccctgac ggcgagcatg gagatgtcag gccgcgtcag gcggccttag ggaattagtt
     6841 gatttcgata cggcgcggtt ttttcgcttc cggaatcacg cgttcgagat cgatatacag
     6901 caaaccattt accaggttag ccccacgaac atgaatgttc tcagctaact ggaatttgcg
     6961 ttcaaagttg cgttcagcga tgccctggta cagataggtg cgctcttttt gttcgtcggc
     7021 gtgagcacct ttcaccacca gcagattatc ctgggcggta atttccagtt cgctctcagc
     7081 aaaaccagcc acagcgatag caatgcggta atggttttcg tctaccagtt caacgttata
     7141 cggagggtag ccgccattac tctggctctg gttgttttct aagtggttaa acaaacggtc
     7201 aaatccaata gcagaacggt aaagcgggga taaatcaaag ttacgcataa tcaatagctc
     7261 ctgaaatcag cgagaatgta ataccttcca caatggacag gtcaggtagc cagaacaccc
     7321 atcaggcgcg tcctcatcgg ctacgatgta aaaatgggtc tggaaatgaa cttttcaagc
     7381 cttatcagcg gacttttttt tgcagtttat ggtctattgc atagactgag ggggcagcac
     7441 gaaacgttaa agtgcgatag ccgccacagt gcgacgtaat gatgatgtta ttttcagcaa
     7501 gggatcgcta taactcatca ggccaacacc cacgatcaac agatgaattt attatgataa
     7561 gaaatgtgtt gttagcgttc atgatatgca gcggaatgac attactcgga ggatgctcca
     7621 gcgtgatgtc ccataccgga gggaaagaag gaacgtatcc cggcacccgc gccagcgcaa
     7681 ccatgattgg cgacgatgaa accaactggg gcactaagtc gctggcgatt ctcgatatgc
     7741 cgtttaccgc tgtgatggac acgcttttac tgccgtggga tgtgttccgc aaagacagct
     7801 cggtgcgctc acacgttgaa aaaagcgaag ccaacgcgca agccaccaat gcggttattc
     7861 caccggccag aatgcctgat aactgattta gcgatcagtt tcggtgatcc acagctggcc
     7921 gccttccatc cacgccagcc attgaccatc cggcgagaag accacggcgt ccgcagaagg
     7981 tggattggcg tggttttcgg ttaaatactc aacctcgcca ctttgcgcat gggcacaagc
     8041 aattcgatta tccagcacaa agcccaacca ttctcctgac ggatgccagt taaatgcaga
     8101 ctgaatatcc gttttgttat gggttaactg gcgcggctcg ccgccctgtg gcgagataag
     8161 ccacagttgc acaatgccgt tatcatcacg cattaaaaac gcgatttgcg taccctgcgg
     8221 attacagcgc acccagtggc gcgggacgtt gactaacccc ggataagccc gatggtgggt
     8281 aaaggttaaa cgtcgctgca cgacgccgcg cggtggcgcg ggcagggtgg tttccgttcc
     8341 acttaacggc gcatcacctg ccgctttcca gccagcttca tcttgcggta actcaacgat
     8401 aaacagctcc ggcactttct cgccctttgg cgaaagtgtg tcgccaataa acgccagcgc
     8461 gtgatttcct acccatcctt cttcataagc acgattgatt tcatcgctgc caggctgcgg
     8521 cgtgggcgtg gttttactca ccagcacgca ccagtggcta ccgctgtatt cacgcggatg
     8581 ctgcttttgt acgttgaccg ggccaaacgg cgcagcaaca ccgacgtttc gcaaatccag
     8641 cgccggatcg agttcatgca ttacatggtc gttataggta aagctcaccc tttcaccgtt
     8701 cgggctaaag acatgcacat ggctgccgcc gcgcagcgct cctggcgtat acggcgcggt
     8761 aatatccatt gcatcgagat tgctcacctt gccgccttca gcaatgactc cgcgtcgatg
     8821 atggaaatcg taataccatg tttcatcagg attttccggg ccatggatga aaacatattt
     8881 ctctgacttc gg
//
LOCUS       DADKRT010000176         8735 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.179, whole genome shotgun sequence.
ACCESSION   DADKRT010000176 DADKRT010000000
VERSION     DADKRT010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8735
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.179"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            243..1154
                     /gene="ttdA"
                     /locus_tag="JQ356_003496"
     CDS             243..1154
                     /gene="ttdA"
                     /locus_tag="JQ356_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HAY4623473.1"
                     /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE
                     TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE
                     EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPG
                     RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI
                     GSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG
                     CWAHRRGTLLVHADLTFENLSHTRSAL"
     gene            1151..1756
                     /gene="ttdB"
                     /locus_tag="JQ356_003497"
     CDS             1151..1756
                     /gene="ttdB"
                     /locus_tag="JQ356_003497"
                     /EC_number="4.2.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
                     /protein_id="HAY4623474.1"
                     /translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK
                     RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGK
                     GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRGKEF
                     GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK"
     gene            1805..3268
                     /locus_tag="JQ356_003498"
     CDS             1805..3268
                     /locus_tag="JQ356_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tartrate/succinate antiporter"
                     /protein_id="HAY4623475.1"
                     /translation="MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVI
                     VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVFGFSNSV
                     IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
                     RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
                     IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL
                     QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN
                     KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRY
                     FFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
                     SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
     gene            complement(3311..4324)
                     /gene="tsaD"
                     /locus_tag="JQ356_003499"
     CDS             complement(3311..4324)
                     /gene="tsaD"
                     /locus_tag="JQ356_003499"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HAY4623476.1"
                     /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
                     NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
                     AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
                     ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
                     AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
                     PAA"
     gene            4561..4776
                     /gene="rpsU"
                     /locus_tag="JQ356_003500"
     CDS             4561..4776
                     /gene="rpsU"
                     /locus_tag="JQ356_003500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HAY4623477.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            4887..6632
                     /gene="dnaG"
                     /locus_tag="JQ356_003501"
     CDS             4887..6632
                     /gene="dnaG"
                     /locus_tag="JQ356_003501"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY4623478.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
                     SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF
                     APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
                     GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
                     GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
                     LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
                     TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
                     MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR
                     GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
                     ERLELWTLNQELAKK"
     gene            6827..8668
                     /gene="rpoD"
                     /locus_tag="JQ356_003502"
     CDS             6827..8668
                     /gene="rpoD"
                     /locus_tag="JQ356_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HAY4623479.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
                     REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
                     LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR
                     EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
                     MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
                     EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
                     KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
                     RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
                     TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
                     MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
BASE COUNT         2109 a         2330 c         2334 g         1962 t
ORIGIN      
        1 ctgcaagtct ttggctaaag gccagctatt cagcatcgtt aattatccgc agttgtgata
       61 agcgcagtgt atttcgcaaa acattgccat tccctgctct ggcgcaatat tcattcttat
      121 tttcgcgttg attcacgaac tgttaattac atattcacgg tggcaaaaaa tataaaacca
      181 catttttagt ggtagtttat ggcggtgaat ttttccagac aaatacaaaa actggagttg
      241 ccatgatgag cgaaagtaat aagcaacagg cagtgaataa gttgacagag attgtcgcta
      301 actttaccgc catgatttct acccgaatgc ctgatgacgt ggtggataaa ctaaaacagc
      361 taaaggatgc cgaaacgtcg tcgatgggga aaattatcta ccatacgatg ttcgacaaca
      421 tgcaaaaagc gattgacctg aatcgtcctg cctgtcagga caccggggag attatgttct
      481 tcgttaaagt cggttcccgc ttcccactgc ttggcgagct gcaaagcata ctcaaacaag
      541 ccgtggaaga ggcaaccgtc aaagcgccac tacgtcacaa tgcggtagaa atttttgacg
      601 aagtaaacac cggcaaaaat accggtagcg gcgtaccgtg ggtcacctgg gacatcatcc
      661 ccgacaatga cgatgcggaa atcgaagttt acatggcagg tggcggctgc acgctacctg
      721 gccgctcgaa agtgttaatg ccgtcagaag gctacgaagg cgtggtgaaa ttcgtcttcg
      781 aaaatatctc caccctcgcc gtaaacgcct gtccaccggt actggtgggc gtgggcatcg
      841 ccacctcggt ggaaaccgcc gccgtactct cgcgtaaagc cattttgcgc ccgattggca
      901 gccgccatcc caatccaaaa gcggcagaac tggagctacg cctggaagaa ggactcaacc
      961 gtctggggat tggtccacaa gggctgactg gcaacagttc agtgatgggc gtacatatcg
     1021 aatctgccgc ccgccatccg tcaaccatcg gcgttgctgt ctctaccggc tgctgggcgc
     1081 atcgtcgcgg cacactgctg gttcatgccg atctcacctt tgaaaatctg tctcacaccc
     1141 ggagcgcgtt atgaaaaaga tcctgacaac cccgatcaaa gctgaagatc tgcaagatat
     1201 tcgcgtcggc gatgtgatct acctgaccgg tacgctggtg acctgccgtg acgtttgtca
     1261 ccgccgcttg atcgaactga aacgtccgat cccttacgat ctcaacggca aagcgatttt
     1321 ccacgctggc cccatcgtgc gcaaaaacgg cgataaatgg gagatggttt ccgttggccc
     1381 gacaaccagt atgcgtatgg aaagttttga acgtgaattt atcgagcaga ccggcgtgaa
     1441 actggtggtt ggcaaaggcg gaatggggcc gctgaccgaa gaaggctgcc agaaattcaa
     1501 ggcgctacat gtgattttcc cggcaggctg cgcggtgctg gcggcaaccc aggtggaaga
     1561 gattgaagaa gtgcactgga cagagctcgg aatgccggag tcgctgtggg tctgccgggg
     1621 caaagagttc ggcccgctga ttgtctctat tgatacccac ggcaacaatc tgatagccga
     1681 aaacaaaaag ctgttcgccg aacgccgcga tcccatcgtg gaagagatct gcgagcacgt
     1741 ccattacatc aaataaccct cccggagagg ctcgccccct ctcctttttc gcaggcataa
     1801 cacgatgaaa ccttccactg aatggtggcg ataccttgcg ccgctggcgg tcatcgccat
     1861 tattgctcta attccggttc ccgcagggct ggagagtcat acctggctct actttgccgt
     1921 ttttactggc gtgatcgttg gactgatcct cgaacccgtg ccgggtgccg tggtggcgat
     1981 ggtgggtatc tccatcatcg ccatactctc tccctggctg ctgttcagcc ccgaacagct
     2041 cgcccagcca ggctttaagt tcaccgccaa atccctctcc tgggcagttt ttggtttttc
     2101 taattcggtt atctggctca ttttcgccgc ctttatgttt ggcacaggct atgaaaaaac
     2161 cgggcttgga cgccgcattg cgctgattct ggtgaaaaag atgggacatc gcacgctgtt
     2221 tctcggctat gcggtgatgt tctccgagct gatcctcgca cctgtaacac cgtccaactc
     2281 ggcgcgtggt gcggggatta tctatcccat catccgtaac ctgccaccgc tctatcaatc
     2341 acaaccaaac gacagcagtt cgcgcagcat tggctcgtac atcatgtgga tggggattgt
     2401 tgccgactgc gtgaccagcg ccattttctt gacggcgatg gcaccaaact tgctgttaat
     2461 tggactgatg aaaagcgcat ctcacgccac gctgagttgg ggcgactggt tcctcgggat
     2521 gttgccgctc agtattttgc tggtgctgct ggttccctgg ctggcttatg tgctgtaccc
     2581 gccggtactg aagtctggcg atcaggtgcc gcgctgggca gagacggaac tgcaggcaat
     2641 gggcccgctc tgttcgcgtg aaaaacggat gctggggctg atggtaggcg cgctggtgct
     2701 gtggattttc ggcggtgatt atatcgatgc cgcgatggtc ggttacagcg tggtggcact
     2761 gatgctgctt ctgcgcatta tcagttggga cgacattgtc agtaataaag cggcgtggaa
     2821 cgttttcttc tggctggcct cgcttatcac cctcgctacc ggactcaaca acactggttt
     2881 tattagctgg tttggcaaac tgttagcagg cagcttaagc ggttattcgc caacgatggt
     2941 gatggtggcg ttgattgtgg tgttttatct gctgcgctac tttttcgcca gcgccacggc
     3001 gtatacctcc gccctcgcac cgatgatgat tgccgctgcg ctggcgatgc cggaaatccc
     3061 gctgccggtg ttctgcctaa tggttggcgc ggcaattggt ctggggagca ttcttacacc
     3121 atacgccacc ggacccagtc cgatttacta cggtagtggt tatctgccaa cggcggatta
     3181 ctggcgactg ggggcgattt ttgggctgat attcctcgtg ttgctggtga ttaccggctt
     3241 actgtggatg cccgtggtgt tgctttaagt gaggacggtg ccggaaattg ctctccggca
     3301 cccaatagtt ttacgcagcc ggtaactccg ccagcggcca gcgcggacgc acgctaacgc
     3361 cgagatccgc cgtcgcgcct gctttaaacc gcaccattcc ggcataggcg atcatcgcgc
     3421 cgttatcagt acaaaactcc ggacgcgcgt agaacacttc gccgcggcgt tttttcatca
     3481 tttccgccag cttcgcccgt aacgtgcggt tagcactcac gccgcccgcc atgaccagtc
     3541 gcttaaagcc cgtctgatcc aacgctcgct tacacttaat catcaacgta tcgaccaccg
     3601 catcttcaaa ggcgcgggcg atatcagcac gcgtctggtc gtcggtgccg ttgtcacgaa
     3661 tcgtgttcgc cgcaaaggtt ttcagaccag aaaagctgaa atccagcccc ggacggtcgg
     3721 tcatcggacg cgggaaaaca aagcgcccgg cagtaccctg agccgccatt ttcgacagta
     3781 acggtccgcc aggataatcc agccccagca gcttcgcggt tttatcaaac gcttcaccgg
     3841 cggcatcatc gatagactcg ccgagcagct cgtactgacc aatgccagtc acgctgatta
     3901 actgcgtatg accgccggac accagcagcg cgacaaacgg aaattccggc gggttatctt
     3961 ccagcatcgg cgctaacaga tgcccttcca tatggtgtac cgggattgcc ggaacgttcc
     4021 aggcaaacgc cagagaacgc cccacggttg cgccaaccag cagtgcgccg actaatccag
     4081 ggcctgcggt ataggccaca gcatcaatgt cttttgccgt taagccagac tcctttagcg
     4141 ccgcctggat caacggtacg gttttgcgca cgtgatcgcg ggaggccagt tcaggcacga
     4201 cgccgccgta gtcagcgtgc aatttcacct gactatacaa ttggttggct aacaaacctt
     4261 tttcatcgtc gtaaatggcg atgccggttt catcgcagga agtttcaata cccagtacac
     4321 gcatgacttg ttttacctcg ctttattacc gcgcagtgta ggaccaatgc gggttgatgt
     4381 aaaactttgt tcgcccctgg agaaagcctc gtgtatactc ctcaccctta taaaagtccc
     4441 tttcaaaaag gccgcggtgc tttacaaagc agcagcaatt gcagtaaaat tccgcaccat
     4501 tttgaaataa gctggcgttg atgccagcgg caaaccgaat taatcaaagg tgagaggcac
     4561 atgccggtaa ttaaagtacg tgaaaacgag ccgttcgacg tagctctgcg tcgcttcaag
     4621 cgttcctgcg aaaaagcagg tgttctggcg gaagttcgtc gtcgtgagtt ctatgaaaaa
     4681 ccgactaccg aacgtaagcg cgctaaagct tctgcagtga aacgtcacgc gaagaaactg
     4741 gctcgcgaaa acgcacgccg cactcgtctg tactaattcc ccgagagcgt tgctctccga
     4801 tcagaccgag ttgtagttgt aaggccgtgc ttccgaaagg aatgcgcggc ttattttcgt
     4861 ttatgaattg ctaaaaatcg gggcctatgg ctggacgaat cccacgcgta ttcattaatg
     4921 atctactggc acgcactgac atcgtcgatc tgatcgatgc ccgtgtgaag ctgaaaaagc
     4981 agggcaagaa tttccacgcg tgttgtccat tccacaacga gaaaaccccg tcattcaccg
     5041 ttaacggtga gaaacagttt taccactgct ttggatgtgg cgcgcacggc aacgcgatcg
     5101 acttcctgat gaactacgac aagcttgagt tcgtcgaaac ggtcgaagag ctggcagcaa
     5161 tgcacaatct tgaagtgcca tttgaagcag gcagcggccc cagccagatc gagcgccatc
     5221 agaggcaaac gctttatcag ttgatggacg gtctgaatac gttttaccaa caatctttac
     5281 aacaacctgt tgccacgtct gcgcgccagt atctggaaaa acgcggatta agccacgagg
     5341 ttatcgctcg ctttgcgatt ggttttgcgc cccccggctg ggacaacgtc ctgaagcggt
     5401 ttggcggcaa tccagaaaat cgccagtcat tgattgatgc ggggatgttg gtcactaacg
     5461 atcagggacg cagttacgat cgtttccgcg agcgggtgat gttccccatt cgcgataaac
     5521 gcggtcgggt gattggtttt ggcgggcgcg tgctgggcaa cgataccccc aaatacctga
     5581 actcgccgga aacagacatt ttccataaag gccgccagct ttacggtctt tatgaagcgc
     5641 agcaggataa cgctgaaccc aatcgtctgc ttgtggtcga aggctatatg gacgtggtgg
     5701 cgctggcgca atacggcatt aattacgccg ttgcgtcgtt aggtacgtca accaccgccg
     5761 atcacataca actgttgttc cgcgcgacca acaatgtcat ttgctgttat gacggcgacc
     5821 gtgcaggccg tgatgccgca tggcgagcgc tggaaacggc gctgccttac atgacagacg
     5881 gccgtcagct acgctttatg tttttgccgg atggcgaaga ccctgacacg ctggtacgaa
     5941 aagaaggtaa agaagcgttt gaagcgcgga tggagcaggc gatgccactc tccgcatttc
     6001 tgtttaacag cctgatgccg caagttgatc tgagtacccc tgacgggcgc gcacgtttga
     6061 gtacgctggc actgccattg atatcgcaag tgccgggcga aacgctgcga atatatcttc
     6121 gtcaggaatt aggcaacaaa ttaggcatac ttgatgacag ccagcttgaa cgattaatgc
     6181 caaaagcggc agagagcggc gtttctcgcc ctgttccgca gctaaaacgc acgaccatgc
     6241 gtatacttat agggttgctg gtgcaaaatc cagaattagc gacgttggtc ccgccgcttg
     6301 agaatctgga tgaaaataag ctccctggac ttggcttatt cagagaactg gtcaacactt
     6361 gtctctccca gccaggtctg accaccgggc aacttttaga gcactatcgt ggtacaaata
     6421 atgctgccac ccttgaaaaa ctgtcgatgt gggacgatat agcagataag aatattgctg
     6481 agcaaacctt caccgactca ctcaaccata tgtttgattc gctgcttgaa ctgcgccagg
     6541 aagagttaat cgctcgtgag cgcacgcatg gtttaagcaa cgaagaacgc ctggagctct
     6601 ggacattaaa ccaggagctg gcgaaaaagt gatttaacgg cttaagtgcc gaagagcgat
     6661 cgggaagccc ccgacagccg cactgagagg cagcggcaaa tatataagta cgccctcgta
     6721 attatcgttg gcggtaaaca accgttggat ttcagcgtta acggctgaag gacatcgggt
     6781 caatcgccca acaccaacct catgaaataa gtgtggatac cgtcttatgg agcaaaaccc
     6841 gcagtcacag ctgaaacttc ttgtcacccg tggtaaggag caaggctatc tgacctatgc
     6901 cgaggtcaat gaccatctgc cggaagatat cgtcgattca gatcagatcg aagacatcat
     6961 ccaaatgatc aacgacatgg gcattcaggt gatggaagaa gcaccggatg ccgatgatct
     7021 gatgctggct gaaaacaccg cggacgaaga tgctgccgaa gccgccgcgc aggtgctttc
     7081 cagcgtggaa tctgaaatcg ggcgcacgac tgacccggta cgcatgtaca tgcgtgaaat
     7141 gggcaccgtt gaactgttga cccgcgaagg cgaaattgac atcgctaagc gtattgaaga
     7201 cgggatcaac caggttcaat gctccgttgc tgaatatccg gaagcgatca cctatctgct
     7261 ggaacagtac gatcgtgttg aagcagaaga agcgcgtctg tccgatctga tcaccggctt
     7321 tgttgacccg aacgcagaag aagatctggc acctaccgcc actcacgtcg gttctgagct
     7381 ttcccaggaa gatctggacg atgacgaaga tgaagacgaa gaagatggcg atgacgacag
     7441 cgccgatgat gacaacagca tcgacccgga actggctcgc gaaaaatttg cggaactacg
     7501 cgctcagtac gttgtaacgc gtgacaccat caaagcgaaa ggtcgcagtc acgctgccgc
     7561 tcaggaagag atcctgaaac tgtctgaagt attcaaacag ttccgcctgg tgccgaagca
     7621 gtttgactac ctggtcaaca gcatgcgcgt catgatggac cgcgttcgta cgcaagaacg
     7681 tctgatcatg aagctctgcg ttgagcagtg caaaatgccg aagaaaaact tcattaccct
     7741 gtttaccggc aacgaaacca gcgatacctg gttcaacgcg gcaattgcga tgaacaagcc
     7801 gtggtcggaa aaactgcacg atgtctctga agaagtgcat cgcgccctgc agaaactgca
     7861 gcagattgaa gaagaaaccg gcctgaccat cgagcaggtt aaagatatca accgtcgtat
     7921 gtccatcggt gaagcgaaag cccgccgtgc gaagaaagag atggttgaag cgaacttacg
     7981 tctggttatt tctatcgcca agaaatacac caaccgtggc ttgcagttcc ttgacctgat
     8041 tcaggaaggc aacatcggtc tgatgaaagc ggttgataaa ttcgaatacc gccgtggtta
     8101 caagttctcc acctacgcaa cctggtggat ccgtcaggcg atcacccgtt ctatcgcgga
     8161 tcaggcgcgc accatccgta ttccggtgca tatgattgag actatcaaca aactcaaccg
     8221 tatttctcgc cagatgctgc aagagatggg ccgtgaaccg acgccggaag aactggctga
     8281 acgtatgctg atgccggaag acaagatccg caaagtgctg aagatcgcca aagagccaat
     8341 ctccatggaa acgccgatcg gtgatgatga agattcgcat ctgggggatt tcatcgagga
     8401 taccaccctc gagctgccgc tggattctgc gaccaccgaa agcctgcgtg cggcaacgca
     8461 cgacgtgctg gctggcctga ccgcgcgtga agcgaaagtt ctgcgtatgc gtttcggtat
     8521 cgatatgaac accgaccaca cgctggaaga agtgggtaaa cagttcgacg ttacccgcga
     8581 acgtatccgt cagatcgaag cgaaggcgct gcgcaaactg cgtcacccga gccgttctga
     8641 agtgttgcgt agcttcctgg acgattaatc ggtaggccgg atcaggcgtt acgccgcacc
     8701 cggcactagt ccctctgcac aaacgccacc ttttc
//
LOCUS       DADKRT010000177         8723 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.180, whole genome shotgun sequence.
ACCESSION   DADKRT010000177 DADKRT010000000
VERSION     DADKRT010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8723
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.180"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            132..197
                     /locus_tag="JQ356_003503"
     CDS             132..197
                     /locus_tag="JQ356_003503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623480.1"
                     /translation="MYIFITHFFTEYVIFKYLLPI"
     gene            336..947
                     /gene="ruvA"
                     /locus_tag="JQ356_003504"
     CDS             336..947
                     /gene="ruvA"
                     /locus_tag="JQ356_003504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HAY4623481.1"
                     /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL"
     gene            956..1966
                     /gene="ruvB"
                     /locus_tag="JQ356_003505"
     CDS             956..1966
                     /gene="ruvB"
                     /locus_tag="JQ356_003505"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HAY4623482.1"
                     /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
                     IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
                     MP"
     gene            complement(2016..2801)
                     /gene="znuB"
                     /locus_tag="JQ356_003506"
     CDS             complement(2016..2801)
                     /gene="znuB"
                     /locus_tag="JQ356_003506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HAY4623483.1"
                     /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLALDTLLGIMAHSALSLGLVVVS
                     LMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV
                     DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     LVGMVAVTGGLTFSAFYDTPAGPSVVLCAALLFIISMMKKQAS"
     gene            complement(2798..3553)
                     /gene="znuC"
                     /locus_tag="JQ356_003507"
     CDS             complement(2798..3553)
                     /gene="znuC"
                     /locus_tag="JQ356_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HAY4623484.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
                     TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
                     PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
                     DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS"
     gene            3632..4564
                     /gene="znuA"
                     /locus_tag="JQ356_003508"
     CDS             3632..4564
                     /gene="znuA"
                     /locus_tag="JQ356_003508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HAY4623485.1"
                     /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD
                     GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLLGAKQV
                     TIAQLEDVKLLLMKSIHGDDDDHDHAEKSEEDHHHGDFNMHLWLSPEIARATAVAIHG
                     KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG
                     LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG
                     TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD"
     gene            4580..5902
                     /gene="mepM"
                     /locus_tag="JQ356_003509"
     CDS             4580..5902
                     /gene="mepM"
                     /locus_tag="JQ356_003509"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HAY4623486.1"
                     /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
                     ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
                     GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
                     TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
                     WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
                     GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
                     VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
                     HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
     gene            6022..6993
                     /gene="lpxM"
                     /locus_tag="JQ356_003510"
                     /gene_synonym="msbB"
     CDS             6022..6993
                     /gene="lpxM"
                     /locus_tag="JQ356_003510"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416369.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY4623487.1"
                     /translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMVGIALTPPKFR
                     DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
                     LAIRGPEKIQPRVDWQGLQIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
                     IARRMNEEVEIFVGPRPEQYTWILKLLKTRRPGEIQPYKRKDLYPIK"
     gene            complement(7082..>8723)
                     /locus_tag="JQ356_003511"
     CDS             complement(7082..>8723)
                     /locus_tag="JQ356_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY4623488.1"
                     /translation="IDGLPHVDFSRVDKFFTYADAFRESLPIISGELYFEAHQGCFTS
                     ESATKAHNRNMENKLHDAEFFTTITNNMTSILRSEFDEIWKEMLTLQFHDILPGSCIS
                     RVYLETEKEYIKLEAKTEKIISDTQSTLLSKIDTSSYKDPHILFNTTCFARNEWININ
                     NNWLKARVNSYGYAVIDPKNKIVNGLKAESRSIENNYIKLLFSENGDLISLYDKRYGK
                     EYITENMHSEIRAYHEDAGFFAAWDFASNYRDGESYVLLAEKMTTVISGPKTTMTLIY
                     HYNSSYLRFAFTLTQDSPLVDVQTFIDWHEPNVSLKVKFPVSVQTSLAQCQIQFGVID
                     RPTHSDDSFAFAKDEIPAHHWVDLSDRETGIALIAKNKYGYRVKDQTLKLTLLRSQHK
                     PGEVVKTDNYDNFLINNFADIGKQKFIFSLFPHHGDYRVGGVINQAYIMNHPLQVVPV
                     KPHPGELPPSLSFFAIDTNSVIIETIKLAEDGDGIIVRLYESHGLEISAMLSWVCNYH
                     YVQYVDLQENKLDDSFYCNQYCNLEFKPFEIITLRLIQ"
BASE COUNT         2379 a         2012 c         2125 g         2207 t
ORIGIN      
        1 cacctataca tgtaaagacg atatctccaa tttcatattc agcagggtaa ttaatattca
       61 cgttgtcatt ccattgaaat agatacgaat atacgtaata gcataaaaaa attatttttt
      121 caggaggtgc aatgtatatt tttattacgc atttcttcac tgaatacgta atatttaaat
      181 atttgcttcc aatataacct gtagaataaa tcatactgcg ccatttttca gttcatcgag
      241 acacctcgca agttttcttc atccttcgct ggatatctat ccagcatttt tttatcatac
      301 agcattatct ttgattcatt acgcaggagc gtcatgtgat aggcagactc agaggcatca
      361 tcattgaaaa acaacccccg ctggtgttaa ttgaagtggg cggcgtaggc tatgaagtgc
      421 atatgccgat gacctgtttt tatgaactcc ctgaagcggg tcaggaagcg atcgttttca
      481 cccactttgt ggtgcgtgaa gacgcgcaac tgctgtacgg ttttaacaat aaacaagagc
      541 gcacattgtt caaagagttg atcaaaacca acggcgtcgg cccgaagttg gcgctggcga
      601 tcctctccgg aatgtcagcg cagcagttcg ttaatgccgt tgaacgtgaa gaagtggggg
      661 cactggtgaa actgccgggt attggcaaaa aaaccgccga acgcttgatt gttgaaatga
      721 aagaccgatt taaaggtttg catggcgatc tgtttacccc tgccgccgac ctggtactca
      781 catcacctgc cagcccggcg accgacgatg ctgaacagga agcggttgcc gcgctggtgg
      841 cgctgggcta taaaccacaa gaagcaagcc gcatggtgag caaaatcgct cgccctgacg
      901 ccagcagtga aacattaatt cgcgaagccc tacgcgccgc gttatgaggt aaaggatgat
      961 tgaagcagac cgtctgattt ctgccggtac cactttgccg gaagatgtag cagatcgcgc
     1021 cattcgccct aaattactgg aagagtatgt tggtcagccg caggttcgtt cacagatgga
     1081 gattttcatc aaagcagcga aactgcgcgg cgatgccctc gatcatttgt tgatttttgg
     1141 tcctccgggg ttgggtaaaa ctacgcttgc caacattgtc gccaatgaaa tgggcgttaa
     1201 tttacgcacg acttctggtc cggtgctgga aaaggcgggc gatctggcag cgatgctcac
     1261 taaccttgaa ccgcatgacg tgctgtttat tgatgagatc caccgtttat cgccagttgt
     1321 tgaagaagtg ctgtacccgg caatggaaga ctaccaactg gatatcatga ttggtgaagg
     1381 tccggcggca cgctccatta aaattgattt gccgccgttt accctgattg gcgcaaccac
     1441 gcgcgcaggt tcgctgacat caccgttgcg cgaccgtttt ggtattgtgc aacgtctgga
     1501 gttttatcag gtgccggatc tgcaatatat cgttagtcgc agtgcacgct ttatggggct
     1561 tgagatgagt gatgacggcg cgctggaagt tgctcgtcgc gctcgcggta cgccacgtat
     1621 tgccaaccgt ctgctgcgtc gagtgcgtga tttcgccgaa gtgaagcacg atggcaccat
     1681 ctcggcagat atcgctgctc aggcgctgga catgttgaat gtcgatgctg aaggtttcga
     1741 ttatatggac cgcaaattgt tgctggcggt aatcgataag ttctttggtg ggccggtagg
     1801 tctggataac ctggcggcgg ctattggcga agaacgtgaa accattgagg atgtgctgga
     1861 accttatttg attcagcaag gctttttgca gcgtacaccg cgtgggcgta tggcgacgac
     1921 gcgggcgtgg aatcactttg gcataacgcc gccagaaatg ccgtaagtcg gattggtcgc
     1981 tcgcgccgca tccgacaaat gtgttcagcg atagattagc tggcctgctt tttcatcata
     2041 ctgataataa ataacagtgc tgcacatagc accaccgacg gacccgccgg cgtatcgtaa
     2101 aatgcggaaa aggttaaacc gcccgttacg gcaaccatcc ccaccaacac agcgacacct
     2161 gccatctgtt ccggcgtgcg ggcaaagcga cgtgcagtag cagcaggaat aatcagcagt
     2221 gaagtaataa tcaacgcgcc aacaaatttc atcgctacac caatcgtcaa tgccgtcacc
     2281 agcatcaaca acaatttcac gcgctgtaat ttcacaccat caacaaacgc cagatccggg
     2341 ctaatcgtca tcgacagcaa attgcgccat tgccagaaca aaatagccac cacgatgacc
     2401 acgccaatcg caatagcgat gagatcttct ggcgtcactg ccagcaaatc accgaacagg
     2461 taagccatca aatcaacacg aatgttagac atcagactaa cgaccaccag gcccagcgac
     2521 agggcactgt gcgccataat ccctaataac gtgtcaagcg ccagctgtgg acgtttctcc
     2581 agccatacca gaccgcccgc caggagcagc gtaacggcaa ttaccgcata gaatggattc
     2641 acgtccagca acaaaccaaa cgcgacgcca agtaatgagg catgagccag cgtatcaccg
     2701 aaataagaca tacgacgcca gactacaaac gaacccagcg gacccgcggc acaggcgagc
     2761 atgatcccgg ctaaccaacc gggaaataat aattcaatca tgagcgatca tttccccgac
     2821 gcaaaacaat tcgtccctgt aaatcgtgac gatgattatg atgatggcga tagataccca
     2881 gttgttcagc accacgagga ccaaacatag aaataaactc cggatgtagg gaaacaactt
     2941 ccggtgtgcc ggaacaacaa atgtggtgat tcagacacag cacttcatcg gtttttgcca
     3001 ttaccagatg cagatcgtga gagaccatta aaacgccaca atccagttcg cgacgcaact
     3061 ggtcaataag gtcatataac gccacctggc catttacatc cacgccttga gtgggttcat
     3121 ccagcactaa taattgcggt cgatttaaca atgctcgcgc taacagtaca cgctgtgttt
     3181 cgccaccaga gagcttttgc atcggtgcgt taatcagatg cccggcctgg acacgtttca
     3241 gtgcaggcaa aatatcttct ttatgtgtgc cagggcgtaa gcgtaaaaaa cggtttacgg
     3301 tcagtggcaa cgtggtgtcg agatacagct tctgcggtac atagccgatg cgtagttttc
     3361 cgttgcgctt gataacccct tcatcgggtg ttaccagccc gagcactacc cgtaccagtg
     3421 tcgacttacc tgcgccattt ggcccaagta aagtcaaaat ttttccaggt ttaagttcca
     3481 gcgacacatc agagaggacg cggcgttggc caaaagaaac cgagacattt tccagggaaa
     3541 ccagacttgt catgttaatt ttagtcttgc agtagtcatg agatgttata atatcacact
     3601 tctcatattc attacgatga ttggtcgcat tatgttacat aaaaaaacgc ttcttttcgc
     3661 agcattatcc gccgctctct ggggaggtgc aacacaggcc gcagatgccg ccgttgtcgc
     3721 ttcgcttaaa cccgttgggt tcatcgcttc tgccattgct gatggtgtaa cagaaacgga
     3781 ggttttactg cctgacggcg cttcagaaca tgattattca ctgcgtccat cggatgtaaa
     3841 acgcttacag aacgcggact tagtcgtttg ggttggcccg gagatggaag cgtttatgca
     3901 aaaaccggta agcaaattac taggagcgaa gcaggtaacg attgcgcagc ttgaagatgt
     3961 gaaactgcta ctgatgaaaa gtattcacgg cgatgatgat gatcacgacc acgcggaaaa
     4021 aagtgaagaa gatcaccatc acggcgattt caacatgcat ctttggcttt ccccagagat
     4081 agcgcgggct acagcggttg caatccatgg aaaattagtg gaacttatgc cgcaaagtcg
     4141 agccaaactt gacgccaacc tgaaggattt tgaggcacaa ttagcctcaa ccgaaacgca
     4201 ggttggtaac gagctcgcgc cgctcaaggg gaaaggttat ttcgtttttc acgatgctta
     4261 cggctatttc gaaaaacagt tcggactgac accgcttggt cattttaccg ttaaccctga
     4321 gattcaacct ggcgcgcagc gtttacatga aataagaaca cagttggttg agcaaaaagc
     4381 aacctgcgtt tttgctgagc cacagttcag gccagcggtc gttgagagcg tcgcacgagg
     4441 gacatccgtt cgtatgggaa cgttggatcc cttggggacg aatatcaaac tgggtaaaac
     4501 aagctattca gaattcctga gtcaattagc caaccagtat gcgagctgcc tgaaaggaga
     4561 ttaatgagga agtgattacg tgcaacagat agcccgctct gtcgccctgg cgtttaataa
     4621 tttaccgcga ccacaccgcg ttatgttggg gtcgctcacc gttcttactc tggccgtcgc
     4681 tgtctggcgg ccctatgttt atcaccgcga tgccacgcca attgtcaaaa ccattgagct
     4741 ggaacagaac gaaattcgtt cgctcttacc tgaagccagt gagccgattg atcaagctgc
     4801 acaagaagat gaagccattc cccaggacga actggatgac aaaatcgccg gtgaagcggg
     4861 cgtgcatgaa tatgttgttt ccactggcga tacgctaagc agcattctca atcagtatgg
     4921 tattgatatg ggtgatatca cccaactggc tgcggccgac aaagaattgc gtaacctgaa
     4981 aatcggtcaa caactctcct ggacattaac cgcggacggc gaactgcagc gcctcacctg
     5041 ggaagtgtct cgtcgtgaaa cccgaaccta tgaccgtact gccgctaacg gttttaaaat
     5101 gaccagcgaa atgcagcaag gagagtgggt taacaatctg ctgaaaggta ccgtcggagg
     5161 gagctttgtt gccagcgcca gaaacgccgg tttaaccagc gccgaagtga gcgcagtgat
     5221 taaagccatg cagtggcaaa tggatttccg caaactgaaa aaaggcgatg aatttgcggt
     5281 gttaatgtct cgagagatgc ttgatggtaa acgtgagcaa agccagctgc tgggcgtacg
     5341 tttgcgttca gaaggtaaag attattacgc aatccgcgct gaggatggca aattctacga
     5401 ccgtaacggt actggtctgg cgaaaggatt cttgcgattc ccaacggcga aacagttccg
     5461 tatctcgtct aactttaacc cgcgtcgtac taatccggtg accggtcgcg ttgcaccaca
     5521 cagaggtgtt gatttcgcca tgccgcaggg tacgccagtg ctttcagtgg gtgacggtga
     5581 agtggtggtt gccaaacgca gtggcgcagc aggttattat gtggctattc gtcatggtcg
     5641 cagctacacc acgcgttata tgcacttgcg caagattctg gtgaaaccgg gacagaaggt
     5701 gaaacgtggc gaccgtatcg cgctttccgg taataccgga cgttcaaccg ggccgcatct
     5761 gcactatgaa gtatggataa accagcaggc cgtaaacccg ctgacggcaa aactgccgcg
     5821 taccgaaggg ctgaccggct ccgatcgtcg cgaattcctg gcgcaggcca aagagattgt
     5881 gccgcagcta cggtttgatt aattaacatc cattcgcagc cggtacgcag tcagtaccgg
     5941 ctttttttat ttggtgcggg gcaagttgcg ccgctacact atcaccagat tgatttttgc
     6001 cttatccgaa actggaaaag catggaaacg aaaaaaaata atagcgaata cattcctgag
     6061 tttgataaat cctttcgcca cccgcgctac tggggagcat ggctgggcgt agcagcgatg
     6121 gtgggtatcg ctttaacgcc gccaaagttc cgtgatccca ttctggcacg gctgggacgt
     6181 tttgccggac gactgggaaa aagctcacgc cgtcgtgcgt taatcaatct gtcgctctgc
     6241 tttccagaac gtagtgaagc tgaacgcgaa gcgattgttg atgagatgtt tgccaccgcg
     6301 ccgcaagcga tggcaatgat ggctgagttg gcaatacgcg gaccggagaa aattcagccg
     6361 cgcgttgact ggcaagggct gcagatcatc gaagagatga ggcgtaataa cgagaaagtt
     6421 atctttctgg tgccgcacgg ttgggccgtc gatattcctg ccatgctgat ggcctcgcaa
     6481 gggcagaaaa tggcagcgat gttccataat cagggcaacc cggtttttga ttatgtctgg
     6541 aacacggtgc gtcgtcgctt tggcggtcgt ctgcatgcga gaaatgacgg tattaaacca
     6601 ttcatccagt cggtacgtca ggggtactgg ggatattatt tacccgatca ggatcatggc
     6661 ccagagcaca gcgaatttgt ggatttcttt gccacctata aagcgacgtt gcccgcgatt
     6721 ggtcgtttga tgaaagtgtg ccgtgcgcgc gttgtaccgc tgtttccgat ttatgatggc
     6781 aagacgcatc gtctgacgat tcaggtgcgc ccaccgatgg atgatctgtt agaggcggat
     6841 gatcatacga ttgcgcggcg gatgaatgaa gaagtcgaga tttttgttgg tccgcgacca
     6901 gaacaataca cctggatact aaaattgctg aaaactcgca gaccgggcga aatccaaccg
     6961 tataagcgta aagatcttta tcctatcaaa taaaaaaaag cctctcaaat tattgagagg
     7021 ctgtactcga taaaaaatct caatgagtgt tcccactatt ttgagttttt aggttagtac
     7081 gctattgaat taatcgtagc gtgataattt caaaaggttt gaactcaaga ttgcaatatt
     7141 gattgcaata aaaactgtca tctaacttat tttcttgaag atcgacatat tgaacgtagt
     7201 gataattaca tacccacgaa agcatggctg aaatttctaa tccatgactc tcatataatc
     7261 ttacgattat accgtcgccg tcttcagcta attttattgt ttcgatgata acgctgttag
     7321 tatcgatagc aaaaaatgat agtgaagggg gtaattcacc cgggtgcggt ttgacaggga
     7381 cgacctgtaa gggatgattc attatatagg cttgattaat aacaccaccc acacggtaat
     7441 ctccatgatg aggaaataag gagaatatga atttttgttt accaatatct gcaaaattat
     7501 taatcaggaa attatcataa ttgtctgtct taacaacttc cccaggttta tgctgcgaac
     7561 gcagcaaagt taatttaagc gtctggtctt tgacacgata gccatatttg ttttttgcta
     7621 ttaaagctat gccagtttct cgatcagaaa ggtcgaccca gtgatgtgct ggtatttcat
     7681 ctttggcaaa agcgaacgaa tcatcgctat gcgttggtct gtcaattaca ccgaactgaa
     7741 tttgacattg tgcaagagat gtttgtactg acaccgggaa tttgactttg agagaaacat
     7801 taggttcgtg ccaatcaata aaagtttgga catcaacgag tggactgtcc tgtgtcaggg
     7861 taaatgcgaa gcgaagataa gaggaattgt agtgataaat cagcgtcatc gtagttttag
     7921 gcccgctgat tacagttgtc attttttcag cgagtaaaac atatgattcc ccatcacgat
     7981 aatttgaagc aaaatcccag gccgcgaaaa aacctgcatc ttcgtggtat gcacggatct
     8041 cactgtgcat attttcagta atgtattctt taccatatct tttatcatat agcgaaatta
     8101 aatcaccgtt ttctgaaaaa agaagtttaa tgtaattatt ttcaatactt cgagattctg
     8161 ccttcagacc atttacgatc ttattctttg gatcaatcac agcataacca taagagttta
     8221 ctcgtgcttt gagccagttg ttgtttatat tgatccattc gttacgagca aaacaggtgg
     8281 tattaaataa aatgtgcgga tctttataag aagaagtatc aattttactt aataaagtag
     8341 actgcgtatc agaaataatt ttctcggttt ttgcttctag tttaatatat tccttttcag
     8401 tttcaagata aactcttgaa atacatgatc cgggaaggat gtcatggaat tgcaaggtca
     8461 gcatctcttt ccatatttca tcaaactcac tgcgaagaat tgatgtcata ttattagtaa
     8521 tagttgtaaa aaattcagca tcatgtaatt tattttccat atttcgatta tgagctttag
     8581 ttgctgactc tgatgtaaag cacccttgat gagcctcgaa ataaagttca cctgaaataa
     8641 tgggcaagct ttcgcgaaaa gcgtcggcgt aagtgaagaa cttatcaaca cggctgaaat
     8701 caacatgagg taagccatca ata
//
LOCUS       DADKRT010000178         8621 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.181, whole genome shotgun sequence.
ACCESSION   DADKRT010000178 DADKRT010000000
VERSION     DADKRT010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8621
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.181"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..190
                     /locus_tag="JQ356_003512"
     CDS             <1..190
                     /locus_tag="JQ356_003512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623489.1"
                     /translation="DMLNPTKDTNWNSTCIYKSRHKMLPVNLTQETLFNSKSQDKHAL
                     FPIFTASWRAYRIMNKGA"
     gene            413..910
                     /gene="ubiC"
                     /locus_tag="JQ356_003513"
     CDS             413..910
                     /gene="ubiC"
                     /locus_tag="JQ356_003513"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709881.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HAY4623490.1"
                     /translation="MSHPALTQLRALRYFKEIPALDPQLLDWLLLEDSMTKRFEQQGK
                     TVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSG
                     PELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            923..1795
                     /gene="ubiA"
                     /locus_tag="JQ356_003514"
     CDS             923..1795
                     /gene="ubiA"
                     /locus_tag="JQ356_003514"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HAY4623491.1"
                     /translation="MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVV
                     LVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIL
                     QIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="JQ356_003515"
     CDS             complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="JQ356_003515"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HAY4623492.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESI
                     KLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG
                     RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDST
                     VPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMA
                     AIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQ
                     DDELHINPSHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLT
                     IESATQGEG"
     gene            4544..4912
                     /locus_tag="JQ356_003516"
     CDS             4544..4912
                     /locus_tag="JQ356_003516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HAY4623493.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVV
                     IACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LIAIIVAVITWCILLWSHFG"
     gene            5022..5630
                     /gene="lexA"
                     /locus_tag="JQ356_003517"
     CDS             5022..5630
                     /gene="lexA"
                     /locus_tag="JQ356_003517"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HAY4623494.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDP
                     SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
                     QGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL"
     gene            5649..7028
                     /gene="dinF"
                     /locus_tag="JQ356_003518"
     CDS             5649..7028
                     /gene="dinF"
                     /locus_tag="JQ356_003518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709876.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HAY4623495.1"
                     /translation="MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVP
                     LLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQA
                     LARALVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPAS
                     LANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYA
                     TLLIGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVL
                     GARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACR
                     QSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLADRYLIWQVILPLVGVWCYLLDGMF
                     IGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHALWLALTVFLALRGLSLAAIWRRHW
                     RNGTWFAAT"
     gene            7144..7353
                     /locus_tag="JQ356_003519"
     CDS             7144..7353
                     /locus_tag="JQ356_003519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HAY4623496.1"
                     /translation="MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNEYRW"
     gene            complement(7395..7910)
                     /gene="zur"
                     /locus_tag="JQ356_003520"
     CDS             complement(7395..7910)
                     /gene="zur"
                     /locus_tag="JQ356_003520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HAY4623497.1"
                     /translation="MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISA
                     YDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQSTHTSAMFI
                     CDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQH
                     DHSVQVKKKPR"
     gene            8228..8482
                     /locus_tag="JQ356_003521"
     CDS             8228..8482
                     /locus_tag="JQ356_003521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623498.1"
                     /translation="MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNI
                     YGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF"
     gene            8506..>8621
                     /locus_tag="JQ356_003522"
     CDS             8506..>8621
                     /locus_tag="JQ356_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HAY4623499.1"
                     /translation="MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSIC"
BASE COUNT         2033 a         2046 c         2310 g         2232 t
ORIGIN      
        1 tgatatgttg aatcctacaa aagataccaa ttggaattct acgtgtatct ataaatccag
       61 acataagatg ttgcctgtta atcttactca ggaaacactt ttcaactcca aatctcagga
      121 taaacatgcg cttttcccca tttttactgc gagttggcga gcttatcgta taatgaataa
      181 gggtgcttaa gtaaaggaaa acatcaccgt tcctggcatc ctgggcggtg atgcccctat
      241 ggttgccctc gccagcgcgg gcatcggcaa agcgtaaggt tcaaaagcga tttaccactt
      301 catgcgattg ttgcgttttt gttgcgcatt agatcactta atttgcttta catctcccgt
      361 aaacactttt ctgcgataca atgcctttac gttatgtaac ggagagttcg gcatgtcaca
      421 ccccgcgtta acgcaactgc gtgcgctgcg ctattttaaa gagatccctg ccctggatcc
      481 gcaactgctc gactggctgt tgctggagga ttccatgaca aaacgttttg aacagcaggg
      541 aaaaacggta agcgtgacga tgatccgcga agggtttgtc gagcagaatg aaatccccga
      601 agaactgccg ctgctgccga aagagtctcg ttactggtta cgtgaaattt tgttatgtgc
      661 cgatggtgaa ccgtggcttg ccggtcgtac cgtcgttcct gtgtcaacgt taagcgggcc
      721 ggagctggcg ttacaaaaat tgggtaaaac gccgttagga cgctatctgt tcacatcatc
      781 gacattaacc cgggacttta ttgagatagg ccgtgatgcc gggctgtggg ggcgacgttc
      841 ccgcctgcga ttaagcggta aaccgctgtt gttaacagaa ctgtttttac cggcgtcacc
      901 gttgtactaa gaggaaaaaa atatggagtg gagtctgacg cagaataagc tgctggcgtt
      961 tcatcgctta atgcgtacgg ataagccaat tggcgcgtta ctgctgctct ggccaacatt
     1021 atgggcgttg tgggtggcga caccgggcgt tcctcagctc tggatcctgg cggtatttgt
     1081 cgcgggtgtc tggctgatgc gcgctgccgg atgtgtggtg aatgattatg ctgaccgaaa
     1141 gtttgatggt catgttaagc gcacggcgaa ccgaccactt cccagcggcg cggtaacaga
     1201 gaaagaggcg cgcgcgctgt ttgtagtgct ggtactgatt tcgtttttac tggtactgac
     1261 gctgaatacg atgaccattc tgttgtcgat tgccgctctg gcgttggcgt gggtgtaccc
     1321 gtttatgaag cggtataccc atctcccgca agtggtgctg ggcgcggcgt ttggctggtc
     1381 gattccaatg gcttttgccg ctgtgagtga gtcggtgcca ttgagttgct ggttaatgtt
     1441 cctcgccaat attctctggg cggtggctta cgacacgcag tatgcgatgg ttgaccgcga
     1501 tgatgatgtg aagattggca ttaaatccac ggcaatcctg ttcggccaat acgataaatt
     1561 gattattggt attttgcaga ttggcgtact ggcactgatg gcgatcatcg gtgagttaaa
     1621 tggcttaggc tggggatatt actggtcaat tctggtggct ggcgcgctgt ttgtttatca
     1681 acaaaaactg attgccaacc gcgagcgtga agcctgcttt aaagcattta tgaataataa
     1741 ctatgttggt ctggtactat ttttagggct ggcaatgagt tactggcatt tctgatgatg
     1801 taaaaaagcc ggatgatcat ccggctttct tctgggttgc ctgatgcgcg gcgcttctca
     1861 ggcctacaca acacatcgca atttattgaa tttgcagatt atggaatgcc ggataaggcg
     1921 ttttcgccgc atccggcaat tctctctggt tacccttcgc cctgcgtcgc actctcaatc
     1981 gtcaaacgca cgtctgatgt aatcaactcc gccagcaact gataaacctt catcgtttct
     2041 gccggttcgg catcgccgct atcgctgata tacccttcat cacgcagcgt cagcaccaga
     2101 gaactgaaca ccgccttgtc gaagaactcc ggcgcgttga taccgtgcag cacggagaga
     2161 cgttgcgcga cggtgcggct ctctttctcc agcgtaccgc ggttgatcga cgggttagcg
     2221 ctcaacagcc agaaggtgat ggcataacgt tgcagcgttt cgcgcgcgcc tgcggccagc
     2281 agctgtagcg tgcgagaatg cgacgggttg atatgcaact catcatcttg cagggtaatc
     2341 agcccctgac gttgcatctc atttgccaac gcatcaataa cgtccggcaa ctcgtcgcga
     2401 tcccagcgca ggaacagctc cgctttcagc attgggtaaa gcacattgac gtgctccatc
     2461 aatacgtcgc gggagatgtg gcgatgctgg gtgacaattg ccgccatcag cgaaggcagc
     2521 accaacatat gcgcaatgtt gttgcgatag taggtcatca gcaccgcttg ctcgcgcggc
     2581 agaatgatga tgtcgccgat agtgtctttc tcaacttcaa acttgttcat ttgcagcgcg
     2641 tgatcgataa gctcgctggc gctggctgaa ggaacggtag agtccgtgga gtaaggtacg
     2701 ttgcgcatca gatccaggta gcagttgagt tgctcggtta actgctcgcg ggtaagtgag
     2761 cgctgacgtg atgccagtag cgcggtacag cagaggttca tggcgtttgc cgcgcctgcg
     2821 ttgttaatgc gtaccatcag atcggcagca atattattga ccgtcggcgt taaccatgcc
     2881 ggacgcaccg cttcgatggg atcgatagat tcacgccagt caggtacatg ctggttaagg
     2941 taggtcatca acggcattgg ttcaccgaag ttgacgtaac cctgaccgag attacgcagc
     3001 ttgcttaaac cgcgcagcat ctgcggcagg ctctctttct ctttcgtcgc accgcgcagt
     3061 tctttggcgt aagtacccac ttccatgacg tgctcataac cgatatagat cggaatcagc
     3121 gtaatcggac gcgtgccgcc acgcagcatc gcctgaatgg tcatcgacag cgtaccggtt
     3181 ttcggatcca gcaaacgccc cgtacgggaa cgaccgcctt ccacgaaata ctcgacggaa
     3241 taaccacggc tgaacagttc gccgagatac tcacggaaaa cggtggaata aagtttattg
     3301 cctttaaacg tacggcgaat aaagaacgcc cccagacggc ggaaaatcgg cccggccggc
     3361 cagaaattca ggttgatccc ggcggcgata tgcggcggca ccagcccctg gtggtacagc
     3421 acgtaagaaa gtagcaggta gtccatgtga ctgcggtggc aaggcacata caccagctca
     3481 tgaccgtcgt gggccagctg gcgaacgcgc tcggcgttat ggacgttgat gccctgataa
     3541 agtcggttcc aggtgaagcc cagaatgcgg tcagtcaggc ggatcatctc gtaagagaaa
     3601 ttcgccgcaa tctcttccat cagcgcaatc gcgttctgct gcgctttttc atgggagatt
     3661 tttttgctgc gcgcttcatc ttctaccgct ttggcaatgg cgcgggaggc gagcagctta
     3721 ttaaacagat cctgacgagc aggcagacgt gggcccacag cagccagacg ttgacgggca
     3781 aagtgcatac gcgccacgcg cgccagtttc tgtgcgatag ttttatccgt gccgtgttca
     3841 tccgccatac ggcgcagcga aactgacggc gagaaacgca caaaactgtc gcgaccgagc
     3901 cacagtacgg cgaaaaattt ctgtacgccg ttaagcatac gcagcggcgg gtttacttcg
     3961 cctttttcac gccccggcgc gcgaccaaac atcaccgata ctggcaccat ctgcacatcc
     4021 agatttgggt tgctacggtg caaatcgaga tagtcgtgga acagcttaat agactcttct
     4081 ttcggcgtgt aataggtgaa tacacgcggc ccgccgtgaa tgaacacata gcgcggcagt
     4141 agcgtgccgt cgatttccag cggctctaac gggtcaggca agtcatgagc cagacactgg
     4201 gcgcgtaacg tcagcaaatc tgctttcgag ttgtacggta aaacgtacat aattggacga
     4261 gaggtatcca gccccagttc cggggcagga tctgccggaa tagacttgct ttttaccagg
     4321 atgcttaatg gtaaattcag taatttgtag taaattcgtg gccagccgga cataaacgat
     4381 gtaaagcctc tggttaataa tgcaaatgcg cggcaaggat agcagaaagt catgggaaat
     4441 tctgtggtat ccgctcatgt ttcgcgcggc gttacgcaaa cccgaatcat cggatttaac
     4501 ggtacactga tattgacgct cataatgtaa aaaggttctt tcaatggcca ataataccac
     4561 tggattcacc cgaattatca aagctgctgg ctattcctgg aaaggtttac gcgctgcatg
     4621 gatcaacgaa gcggcattcc gtcaggaagg cgtagcggta ttgttggcgg tggtcatcgc
     4681 ctgctggctg gatgtggacg caattacccg cgtgctgctt atcagctccg tgatgctggt
     4741 gatgattgtg gaaatcctca atagcgccat cgaagcagtg gttgaccgaa ttggctctga
     4801 ataccatgag ctttccggac gcgcaaaaga tatgggatcc gccgcggtgc tgattgcgat
     4861 tatcgtcgcc gtgataacct ggtgcatcct gttatggtcg cattttggat aacccttcca
     4921 gaattcgata aatctctggt ttattgtgca gtttatggtt ccaaaatcgc cttttgctgt
     4981 atatactcac agtataactg tatatacacc cagggggcgg aatgaaagcg ttaacggcca
     5041 ggcaacaaga ggtgtttgat ctcatccgtg atcacatcag ccagacaggt atgccgccga
     5101 cgcgtgcgga aatcgcgcag cgtttggggt tccgttcccc aaacgcggct gaagaacatc
     5161 tgaaggcgct ggcacgcaaa ggagttattg aaattgtttc cggcgcatca cgcgggattc
     5221 gtctgttgca ggaagaggaa gaagggttgc cgctggtagg tcgtgtggct gccggtgaac
     5281 cgcttctggc gcagcagcat attgaaggtc attatcaggt cgatccttcc ttattcaagc
     5341 cgaatgctga tttcctgctg cgcgtcagcg ggatgtcgat gaaagatatt ggcattatgg
     5401 atggcgactt gctggcagtg cataaaactc aggatgtacg taacggtcag gtcgttgtcg
     5461 cacgtattga tgacgaagtt accgttaagc gcctgaaaaa acagggcaat aaagtcgaac
     5521 tgttgccaga aaatagcgag tttaaaccaa ttgtcgttga ccttcgtcag cagagcttca
     5581 ccattgaagg gctggcggtt ggagttattc gcaacggcga ctggctgtaa catatctctg
     5641 agaccgcgat gccgccaggc gtcgcggttt gtttttcatc tctcttcatc aggcttgtct
     5701 gcatggcatt cctcacttca tctgataaag cactctggca tctcgcctta cccatgattt
     5761 tctccaatat caccgttccg ttgctgggac tggtcgatac ggcggtaatt ggtcatcttg
     5821 atagtccagt ttatttgggc ggcgtggcgg ttggtgcaac ggcgaccagc tttctcttta
     5881 tgctgttgct gtttttacgc atgagcacca ccgggctgac tgcgcaggct tatggtgcca
     5941 aaaatcctca ggcattagcc cgtgcgctgg tgcaaccgtt gctgttggcg ttgggggcag
     6001 gggcgttaat tgcgctgctg cgtacaccga ttatcgatct ggcactgcat attgttggcg
     6061 gtagtgaagc agtcctggaa caggcgcggc gctttcttga aatccgctgg ttaagcgcac
     6121 cggcgtcact ggcgaatctg gtattacttg gttggttact cggcgtgcaa tatgcccgtg
     6181 cgccagtaat tttgttagtg gtcggcaata tcctcaacat tgtgctggat gtctggctgg
     6241 tgatggggct gcatatgaac gtgcagggcg cggcgctggc gacggttatt gcggaatatg
     6301 caacattgct gattggtctg ctaatggtgc gtaaaatcct caaactacgc ggaatttccg
     6361 gcgaaatgct gaaaactgcc tggcgaggaa acttccgtcg cttgctggcg cttaaccgcg
     6421 atatcatgct gcgttcgctg ttgttgcaac tctgtttcgg cgcgatcacc gtacttggtg
     6481 cgcgactggg gagtgacatt atcgctgtta acgcggttct gatgacgcta ctcaccttta
     6541 ccgcctatgc gctggatggt tttgcctacg cggttgaagc gcattccggt caggcgtacg
     6601 gtgcgcgcga cggtagccag ttgctggatg tctggcgggc agcgtgccgc cagtcgggga
     6661 tcgtagcgtt actgttttcg gtagtttatt tgctggcagg ggaacacatc attgcgttgc
     6721 tgacgtcgtt aacccagatt cagcagctgg ccgaccgcta tcttatctgg caggtgattt
     6781 tgccgttggt tggcgtctgg tgttatctgc tggacggcat gtttataggc gcaacgcgcg
     6841 cagccgaaat gcgtaacagt atggcggtgg ccgccgcagg ttttgcgctg acgctcctta
     6901 cgctgccgtg gctgggtaat catgctttgt ggctggcgtt aaccgtcttt ctggcgttgc
     6961 gcgggctttc tctggcggct atctggcggc gtcactggcg caacggtacc tggtttgccg
     7021 caacgtgacg gttaaaaatt ctgaataaat aatcctaagc caaattgctg actacactta
     7081 atctcacgtt cagaagaaaa gtgaacgtac tctcattcac aacctaacga tgaggtcttg
     7141 attatgaata aagatgaagc cggcggtaac tggaaacagt ttaaaggtaa agtgaaagag
     7201 caatggggca aactgaccga tgatgatatg acgatcattg aaggtaaacg tgatcaactg
     7261 gtcggtaaaa tccaggaacg ttatggttat cagaaagatc aggcagaaaa agaggtcgtg
     7321 gattgggaaa cccgcaatga atatcgctgg taattaatcc ctcctgcccg acgtgtacaa
     7381 ggatgtacgc cctcttaacg cggtttcttt ttcacctgca cagagtgatc atgctggcac
     7441 tgttcaggat gacgacacgc ttccacttcc acgcatgccg cacagagccc atgtgcttca
     7501 atcacattat gccgcagggc aaaccccatt tttgccgcca gcgtatgcat gatgtcttcc
     7561 acgccttctg cacactcttc tttcactgcg ccgcagcgat cgcaaataaa catggctgaa
     7621 gtatgggtgg actggtcgaa cagatgacag agcacataac tgttggtgga ttccacctta
     7681 tgcacaaaac cttgctcaag cagaaaatcc agcgcgcgat aaaccgttgg cggcttggct
     7741 tgcggttcag cttcgcgcag taaatcaagc agatcataag cgctgatagc gccatcctgc
     7801 agactcatca ggcgcaacac ttccaggcgc tgtggggtca ggcgcacatt acgctgcgcg
     7861 cagatttttt cagcctgcgc taataactcc tgcgttgtgg tcttttccat cgggcacctc
     7921 aaagtggggg ttaagaatgt ccttacttta ccatgttcca ggaaaaacac cgagaaccct
     7981 tattgttgcc gtaatgttga ttttctgttt tgtaggtaag gtgttatgtt gccttgtcgt
     8041 accattatca acacgataat aattaataat tcatttttaa ataaattgct tcaagttaac
     8101 tcgctattta tttaactggg tttaaacgca tacctgtagt tcagaaatta tgagcgattt
     8161 ttgatagtga ccagatggca aaagaattat aaggaggaca cggtacgaca aaaaaggtag
     8221 atgaatcatg ttgaagataa tacccggtgc aactggatac tttaataaaa cactcaattc
     8281 aaatcaattc gataatgaag atgcaatcaa agataaatta gataatagag gttcaatcaa
     8341 aggtaaatta aataatatat atggtaaatc tattgattat gcagcgctgc gtcatcggga
     8401 tataattatt gcaaaaatag atttgtttat tcaacgaatc acgcataatt tatggcatgc
     8461 acgtaaaaaa atgtgttttt aattgagcaa ataaatgatc tcaaaatgtg ggtcaataag
     8521 tatattgacg attgcactga tgaggattta aacgatcgtg actttattgc atcagttgtt
     8581 gaccgggcta tttttcattt cgcgattaat agtatatgta a
//
LOCUS       DADKRT010000179         8598 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.182, whole genome shotgun sequence.
ACCESSION   DADKRT010000179 DADKRT010000000
VERSION     DADKRT010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8598
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.182"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..183
                     /locus_tag="JQ356_003523"
     CDS             <1..183
                     /locus_tag="JQ356_003523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HAY4623500.1"
                     /translation="EAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQ
                     KGEVVGVDDQCKEHKE"
     gene            402..644
                     /locus_tag="JQ356_003524"
     CDS             402..644
                     /locus_tag="JQ356_003524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709694.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623501.1"
                     /translation="MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
                     QYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW"
     gene            complement(974..1903)
                     /gene="fdhE"
                     /locus_tag="JQ356_003525"
     CDS             complement(974..1903)
                     /gene="fdhE"
                     /locus_tag="JQ356_003525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HAY4623502.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLREL
                     AENNPLDDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKH
                     WQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFI
                     WAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAV
                     ADDLASLVLDARMEQEGYARSSINPFLFPGEGE"
     gene            complement(1900..2535)
                     /gene="fdoI"
                     /locus_tag="JQ356_003526"
     CDS             complement(1900..2535)
                     /gene="fdoI"
                     /locus_tag="JQ356_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY4623503.1"
                     /translation="MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLM
                     QIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE"
     gene            complement(2532..3434)
                     /gene="fdxH"
                     /locus_tag="JQ356_003527"
     CDS             complement(2532..3434)
                     /gene="fdxH"
                     /locus_tag="JQ356_003527"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY4623504.1"
                     /translation="MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKC
                     TLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHY
                     VGVGPNRADEEENNLHEEKDEERK"
     gene            complement(3447..6497)
                     /gene="fdnG"
                     /locus_tag="JQ356_003528"
     CDS             complement(3447..6497)
                     /gene="fdnG"
                     /locus_tag="JQ356_003528"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(5910..5912),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY4623505.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFI
                     HSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLS
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVANYYAPIR
                     SGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYD
                     KSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE
                     YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNK
                     NKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNY
                     AIPHEPKSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIF
                     AGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     LQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            6691..7524
                     /gene="fdhD"
                     /locus_tag="JQ356_003529"
     CDS             6691..7524
                     /gene="fdhD"
                     /locus_tag="JQ356_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HAY4623506.1"
                     /translation="MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVA
                     LVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSS
                     RRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDF
                     QPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSS
                     RASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLS
                     N"
     gene            7678..>8598
                     /locus_tag="JQ356_003530"
     CDS             7678..>8598
                     /locus_tag="JQ356_003530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HAY4623507.1"
                     /translation="MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAP
                     EAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYVDWLKDFK
                     QGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNT
                     INEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAEL
                     KNIEEREGKIFHYYSLAVMISAKQINNLISQEKFDVDAAMKKVSELETLVAQAKEADK
                     GGMNFSFINSAGQYQLEAKKYVRRIRDKVPY"
BASE COUNT         2049 a         2175 c         2273 g         2101 t
ORIGIN      
        1 gaggcaatta aacggctgaa caagcttcgg ggctggcgta aggtttcacg atctgcaatt
       61 ttacgcgaag cggttgagca atatctggag cggcagcaat ttccggtgcg taaagcaaag
      121 ggaggcaggc aaaaggggga ggtagttggt gttgatgatc agtgtaagga gcataaggaa
      181 tgaaaaaaat ttttcattct tgaatataaa aaaacagatg cccttattct ggtattaata
      241 caaggctgtt ttacttgaac ttataataac tgcaactgtt acatcgtatc tggaaaacgc
      301 ctcgcaaaaa taaaaaatga tgcgtaaatg agctttcttt aaagattcgg caagggtact
      361 tttctctcca tagattcaaa aatgatattg gcgagatatt tatgaactct ctggcaggta
      421 tagatatggg cagaatttta ctcgatttat cgaatgaggt gattaagcaa cttgatgatc
      481 tcgaggtgca gcgtaatctt cctcgtgcgg acctattaag ggaagcggta gatcaatacc
      541 tgataaatca atcgcaaaca gcaagaacca gtgttcctgg catctggcaa gggtgtgagg
      601 aagatggtgt cgaatatcag cgtaagctgc gcgaggaatg gtaatgggaa aaaatgatgt
      661 caatcagatt gctgacaacg tgcgcgttgt tcatgccgga tgcggcgtga acgccttatc
      721 cggcctacaa agtcatgcaa attcaatata ttgaagttta ttggtaggcc tgataagcgc
      781 agcgcatcag gcaatcatac gcttgtcatc agtgacatac ccataacctt atcgatgtgt
      841 tggagggaag aacgaggcaa acagacaatt gcggcatgat cttgaatggg taacgcggaa
      901 tacgagagat ggtgtcgtca caccctatga gctgtaatcc gggcgaccag cgccacccgg
      961 aaaacgtcag agattactcc ccttcacccg gaaacaggaa cgggttgatg gaactgcggg
     1021 catagccttc ttgctccatt cgcgcgtcca gtaccagaga agcgaggtca tctgccacgg
     1081 cttcaacttt cggttctttt tcctgataaa gaatcttcag gtaagtgccg cagtcatcgc
     1141 agctttcggc tttaatcgcg gcctgttcgt catccagcga ccagtaatgc agtttgccgc
     1201 tctgttcaca gttgctgcat tttacgcgca ctacgtgcca ttcggtttca cacaggttgc
     1261 agtgcaggta acgcagaccc tgagtggtgc caatttgcac catgctggac accggcatag
     1321 aaccacaaac cgggcaatat tgacgttgct cgccgtattc agcgcgggct ttgccgggga
     1381 tcagattggc catctgcgcc cagtagagcg acagtgcagc ccagataaac ggcgctttat
     1441 cgctgctgac ggatgagaaa tcagaggcaa acagtgcgct ggccatatct tccagctcct
     1501 gagtcgatgc cttctccaga ttctcaatca ctgccagcgc cgggccgctc atttcaggtt
     1561 tcagctcagc aatcagcgcc atcagcagct tttgccagtg cttatcacgc ggcagaacgt
     1621 gaatatccag cgggggcttg ccctgtgcgc tggcttcttt aatgcgcgcg gtcagatcca
     1681 tctccagcgg atggtcgtac agcaccactt cctgggcgtg ggcgataagc gcagcaaagc
     1741 gcaggtaatc atccagcgga ttattttctg ccagctcgcg cagacgctcg gcgcggcggt
     1801 tgtataaatt cttgagccga gggaacaata acggcggaat catatccgcc gtacgtttct
     1861 cgctcgaacc cagctcatct tgcgggatta tgcgaatact cattcagctt tcttttccgt
     1921 tgtcttgcgg acctcacggt accagcgcgg gtgatgtttc ttcgcccagg cgctggtaac
     1981 ccatccttcc accatggcgg taatcgtgcc tttcacccaa agggcggcgt agatatgcac
     2041 catgataacc acaattaacg ccactgcggc aaatgaatgc agcattaacg cgaatcggat
     2101 caccgggatt gagaaagcag gcgcaaaata aggacgccag ataatcacgc cgctcaccag
     2161 cagcagaacc aggaaaataa tcgccgccca gaaaacgcat ttctgaccga agttataacg
     2221 cccggtgtca cctacttcct cgttgacgac gatcttacga atattcttcg cccaaaagat
     2281 atcatcccga ttgattaggt tgtgatgcca gtaacggaaa aacatgatga tgaacgaggc
     2341 aaacataacc acgccgacaa acgggtgcag aattcgcgcc agctgcggtg tgcccatgat
     2401 ttgcatcaac cagttgaagg acgggaacaa aaagcccagc ccgctcaccg ccgctaggat
     2461 gaagcagaag gcggtgatcc agtggttgat acgttccggc gcggtgtagc gcacgatggt
     2521 gtcacgtcgt ttcatttgcg ctcctcgtct ttctcttcgt gcagattatt ctcttcctca
     2581 tccgcacggt tcggaccgac acccacgtag tggaagatac tggctgcgaa ggtagccgca
     2641 aagccaacag ctgcgagcgg tttccagatg cctttccaga atttcacggt ttcgctgatt
     2701 tccgggttct ccggcaagcc atgatacaga tttggcttgt cagcatggtg cagcacgtac
     2761 ataacgtgtg taccaccgac gcctgccgga tcgtacaggc ccgcattgtc gtaaccgcgg
     2821 gttttcagct ccgccacgcg ctcgctcgcc agcgttttca tcgactcttt cgtaccgaag
     2881 tgaatcgcgc ccgttgggca ggtcttcacg caggctggtt cttgcccaac caccacgcgg
     2941 tcaacgcaca gcgtacattt gtagacgcgg ttgtcttccg ggttgaggcg cggaatgtcg
     3001 aacggacagc ccgcaatgca ataaccgcag ccaatgcact gctcggactg gaagtcgacg
     3061 ataccgttgg catactgaat aattgcacct tccgccgggc acgctttcag acagcctgga
     3121 tcggaacagt gcatacagcc gtctttgcgg atcagccatt ccagtttgtc gttctgctcc
     3181 acttccgaga agcgcatcac cgtccacgat ttggcactta aatcattggg gttgtcgtac
     3241 accccaatgt tattgccgac ggtatcgcga atgtcgttcc actctgaaca cgccacctga
     3301 caggctttac agccgataca ggtggtgacg tcgatgagtt tcgccacttc ttcctggaag
     3361 tcccgcgcct gaggcgcggg ggtcagaccg ttagtcgcgg aacgacgaat gatatcttga
     3421 gattgataag ccatatgtcg tctccgttac accttttcca cattcacaag gaaggactta
     3481 aactccggcg tctgcgtgtt cgcatcacca acgaatggcg ttaaagtatt ggcaataaag
     3541 ccttttttag ctacgccttc atagccccag tgaatcggaa taccgatggt atcgatatct
     3601 ttgccgttcg ctttcagcgt gcgaatacgt ttggtcacca ccgctttggc tttgatatag
     3661 ccacggttgg aggagacttt cacggtatcg ccctgggcaa tgccaagttt attcgccagc
     3721 gactccccga tttccacaaa ctgctctggc tgcaaaattg cgttcaacag cgcgtgtttg
     3781 gtccagtagt ggaagtgctc ggtcagacga taggtggttc cgacatacgg gaacttatcg
     3841 gctttaccca atgcttcggc gtcgtcttta aagatacgtg cagccgggtt cgagataacg
     3901 tttggatgca gcgggttagt tcccagcggc gtttcaaacg gctcgtagtg ttccgggaac
     3961 ggaccttccg ccatcttatc gagggcaaac agacgcccca tgccttcctg ctgcatgata
     4021 aacggcccga cgccgctacc cggaggcgct gcgctgtagt ccggaatatc ccagccggtc
     4081 cacttagtgc cgtcccattt cagcaactga cgcttcggat cccacgggtt accctgcgga
     4141 tctgcggagg cgcggttata cagaatgcgg cggttaagcg gccatgccca tgcccagccc
     4201 agcgtgttac cgaggccaga cggatcggcg ttatcacgac gcgccatctg gttgccttcc
     4261 ggcgtccagc taccggcgaa aatccagcag ccacaggagg ttgtaccgtc atcgcgcaat
     4321 tgggcgaacg agctaagttg ttggcctttc ttgacgataa ccgcaccggt tgccggatcg
     4381 gtaatatcgg ccagcgcctt accgttgctc tccatcgcta cttcttccga cttcggctca
     4441 tgcggaatgg cgtagttcca ggtcatgttc agcacctgat ccgggttcgc gccaccctgt
     4501 tcggcataca tcttgcgcaa gcgcaggaag ataccggaga ggatctcacc gtcagtcagc
     4561 gcaatccccg gggcgtccgc acctttccag tgccactgca accagcgacc tgagttaacg
     4621 attgaaccgt tctcttctgc gaagcaggtc gatggcagac ggaacacttc ggtctggatc
     4681 ttcgacgagt caacttcgtt cagctcaccg tggttctgcc agaagttaga ggtttcagtg
     4741 ttcagcgggt cgatggtgac gaggaacttc agtttcgaca gacaaccgat cactttgttt
     4801 ttgttcggga atgaggcaac agggttaaaa ccctggcaga tatagccatt gaccttgccc
     4861 tctttcatca tctcgaagta ttgcaggacg tcgtagcctt tatcccactt cggcaaccag
     4921 tcaaagcccc agctattttc cgccgtcgct ttatcaccaa agaaggcctt catcatagag
     4981 acgaagaatt tcgggtagtt gccccagtag tttacctggc cttccagcag cggttttggc
     5041 gtgttggcgg taaggtaggt ttgcagatcg gtctgcttct cgcttggcag cgtcatgtaa
     5101 cctggcaggc tctgcgacag cagccccagg tccgtcagcc cctgaatatt ggagtgaccg
     5161 cgcagggcgt taacgccgcc gcctgccatc cccatattgc cgagcagcag ctggatcatc
     5221 gccatcgtac gaatgttttg cgcaccaacg gagtgttgcg tccagccgag ggcatacagg
     5281 aacgaggcag ttttatcgtg agcactggtt tctgcgatgt attcgcagac tttcaggaac
     5341 gcgtcttttg gcgtaccaca gatgttttca accacatctg gcgtgtagcg ggaaacgtgc
     5401 tgtttcagca agttccacac gcagcgcgga tgttgcagcg tggtatcgcg tttggcgaag
     5461 ccgttttcgt ccagttcgta agtccaggag gatttatcgt acttgcgttt ttccgcgtca
     5521 tagccggtga aaaggccatc ttcaaagccg taatcctcac gcacgatcag gctggcgttg
     5581 gtataggctt cggtgtattc gcggttgaat ttttcattgt tcagcaggta cagcaatacg
     5641 cctgacagga aagcaatgtc agtaccggaa cgaatagggg catagtagtt agctaccgcc
     5701 gccgtacgcg taaagcgagg atcgatcaca atcagcttcg cgccgttgtg aattttggct
     5761 tccatcgccc agcggaaccc gaccgggtga gcttcagcgg cgttaccgcc catcaccacg
     5821 acgaggttgg cgttcttgat gtcgacccag tggttggtca tcgcaccgcg accaaatgtt
     5881 ggagcaagac ttgctaccgt tggtccgtgt cagacacgcg cctggttgtc gaccgcgagc
     5941 atacccagcg cgcgggagaa tttttgcgtt aaatagccgg tttcgttact cgacgcggaa
     6001 gcacacagca tcccggtgga gagccagcgg ttaacagtca cgccttcggc gttttgcgca
     6061 atgtagttag catcgcggtc ttctttcatc agtttggcga tgcgatcaaa cgcctcttcc
     6121 caactgattt gctgccattt atcagaacct ggcgcacggt attccggaaa cttcagacgg
     6181 ctttcggagt ggatgaaatc caccaggcca gcgcctttcg gacaaagtgc accgcggttg
     6241 accgggtgat ccggatcgcc ttcgatatgg aagatagatg ctttggcgtt ttttgctccg
     6301 tcaccgaggc tgtacatcaa cagcccacag cctacggaac aataggtgca ggtattacgg
     6361 gtttcgcggg tgcgcagcag tttatactgc cgggtttccg cgagtgctac gctgggtgca
     6421 aaacctagtg ccgctgccgt ggtgcctgcc ataccgccag cgcagatctt aaagaactgc
     6481 cttctgctga cctgcatgga ttgctccttg tttcgacatt gtcacgtccc atttacattc
     6541 gcttgctgcg tgtgcaggga gtgggagtta tttttctttg cggaaggggc cgcaaaggtc
     6601 cagaattggc tcgatttccc tccatccagg aagggtttgt aacagaatac cataatgttg
     6661 gtgtgtgtgt tcttatctgg ttaagagaaa gtgaaaaaaa cacagcgaaa agaaatcgaa
     6721 aatgtgacaa atatcacagg tgttcgtcaa attgagttat ggcggcgtga tgatttacaa
     6781 cacccacggt tagatgaggt cgcggaagaa gttcccgttg cgctggtcta caacggcatt
     6841 tcgcatgtgg tgatgatggc gtcgcccaaa gaccttgagt actttgcgct cggtttttcg
     6901 ctttccgagg ggattatcga aagtccgcgc gatatcttcg gcatggatgt cgttccttcc
     6961 tgtaatggtc ttgaagtaca aattgagctt tccagccgcc gctttatggg gttgaaggag
     7021 cgccgccggg cgctggcggg acgtacgggc tgtggcgtat gcggcgtgga gcaacttaat
     7081 gacatcggaa aaccggtgca gccgctaccg ttcacccaga cgtttgatct caacaaactg
     7141 gatgatgcat tacgtcatct caacgatttt cagccagtgg ggcaactgac tggttgtact
     7201 cacgccgctg cctggatgtt gccatctggc gaactggtcg gcgggcatga agacgtgggt
     7261 cgccatgtgg cgctggacaa actgttaggc cgccggtcac aagaagggga aagctggcag
     7321 caaggtgcgg tactggtttc cagtcgtgcc agttatgaaa tggtgcaaaa gtcggcgatg
     7381 tgcggcgtag agattttgtt tgcggtgtct gccgcgacca cgcttgctgt agaagtggct
     7441 gagcgctgta atctgacact ggtaggtttt tgtaaaccgg gtcgggcaac ggtttatacc
     7501 catccgcagc gtttgagcaa ttaattaaaa taagtcctgc gatatatatt aaattgcagg
     7561 acttattcat ttcgtgaatt ttattatttt tatttataaa taaaacgcgt gtagtggcgt
     7621 tttctttttt catttattat gttcactctc ttatctatat atttataagg caattaaatg
     7681 aaaaggaatt tattatcttc cgctattata gtcgccatca tggccctcgg tctgacgggt
     7741 tgtgatgata aaaaagccga aacagaaacg cccccgcctg ccaatagtca acctgccgca
     7801 ccagctcctg aagctcccgt tgcaaaagca gaagctaaac ctgaaacacc tgcgcaaccg
     7861 gtggtcgatg aacaagcggt tttcgacgaa aaaatggatg tctatatcaa gtgctataac
     7921 aagttacaga tccctgtaca gcgcagtctg gcgcgttatg ttgactggct gaaagatttt
     7981 aaacaggggc ctaccggtga agagcgtact gtttatggca tctacggcat tagtgaatcc
     8041 aacctcgctg agtgtgaaaa aggcgtaaaa agtgctgtgg cgttaacgcc tgcgctgcaa
     8101 ccaattgatg gcgtggcggt gagttatatc gatgctgccg tggcgttggg taataccatt
     8161 aacgaaatgg ataaatatta cacccaagaa aattataaag acgatgcgtt tgcgaaaggg
     8221 aaaacgctgc accagacatt cttaaaaaat ctggaagcct ttgaacctgt agcagaatct
     8281 tatcatgcgg cgattcagga aattaacgat aagcgccagc ttgcggaact gaaaaatatt
     8341 gaagaaagag aagggaaaat attccactac tattctctgg cagtcatgat ttcagcgaaa
     8401 caaattaata acctgatatc gcaagagaag tttgatgttg atgcggcaat gaagaaagtg
     8461 tctgaactgg aaacgctggt ggcgcaggcc aaagaagcgg ataaaggcgg catgaatttc
     8521 tcgtttatta attcggcagg ccagtatcaa ctcgaggcta aaaaatacgt tcgccgcatc
     8581 agagataaag tcccgtac
//
LOCUS       DADKRT010000180         8452 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.183, whole genome shotgun sequence.
ACCESSION   DADKRT010000180 DADKRT010000000
VERSION     DADKRT010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8452
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.183"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(141..2684)
                     /gene="mdoH"
                     /locus_tag="JQ356_003531"
     CDS             complement(141..2684)
                     /gene="mdoH"
                     /locus_tag="JQ356_003531"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HAY4623508.1"
                     /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED
                     DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
                     HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
                     WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRATVGLRTKHWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
                     RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
     gene            complement(2677..4212)
                     /gene="mdoG"
                     /locus_tag="JQ356_003532"
     CDS             complement(2677..4212)
                     /gene="mdoG"
                     /locus_tag="JQ356_003532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HAY4623509.1"
                     /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPK
                     SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
                     VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
                     KFVVMPGRDTVVDVQSKIYLRDKVGKLGGAPLTSMFLFGPNQPSPANNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS
                     AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
                     KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
                     IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            4606..5763
                     /gene="mdoC"
                     /locus_tag="JQ356_003533"
     CDS             4606..5763
                     /gene="mdoC"
                     /locus_tag="JQ356_003533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706958.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HAY4623510.1"
                     /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
                     SLWLTLFNDFIHSFRMLVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
                     TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
                     RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
                     FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
                     VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
     gene            complement(5771..7252)
                     /locus_tag="JQ356_003534"
     CDS             complement(5771..7252)
                     /locus_tag="JQ356_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HAY4623511.1"
                     /translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
                     EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLVAAKRGVRVRLLLDDN
                     NTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
                     TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
                     PEGEMADRIELPASWHNDAMTHRYLRQMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
                     GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
                     SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
                     FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
                     WGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL"
     gene            complement(7194..7727)
                     /gene="ymdB"
                     /locus_tag="JQ356_003535"
     CDS             complement(7194..7727)
                     /gene="ymdB"
                     /locus_tag="JQ356_003535"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HAY4623512.1"
                     /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
                     ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL
                     NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
                     EENAHLYERLLTQQGDE"
     gene            complement(7823..8137)
                     /locus_tag="JQ356_003536"
     CDS             complement(7823..8137)
                     /locus_tag="JQ356_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000901553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY4623513.1"
                     /translation="MNVQTFFKLSYARQFFFPFIAIAGSTAQGGVIHFYGQIVEPACD
                     VSTQSSPVEMNCPQNGSVPGKTYSSKALMSGNVKNAQVASVKVQYIDKQKKLAVMNIE
                     YN"
     gene            complement(8254..>8452)
                     /gene="csgC"
                     /locus_tag="JQ356_003537"
     CDS             complement(8254..>8452)
                     /gene="csgC"
                     /locus_tag="JQ356_003537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706954.2"
                     /note="involved in autoagglutination of curliated cells;
                     not involved in production of curli fibers; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HAY4623514.1"
                     /translation="LREGGSGQSQTKQEKTLSLPANQPIALTKLSLNISPEDRVKIVV
                     TVSDGQALHLSQQWPPSSEKS"
BASE COUNT         2105 a         2210 c         2003 g         2134 t
ORIGIN      
        1 aacgccggta tttttattgg ctcgttgttt ttgccggatg cggcgtgaac gccttaccca
       61 acctacaaaa tcttgcaaaa tcaataaatt gcaggaacga tgtaggcctg ataagcgtag
      121 cgcatcaggc aactacgttt ttattgcgaa gccgcatccg gtttacgcaa tgccagtgga
      181 ttgagcttta tcccttcgta ataactcacc catgaagaat atctctccgg ggaattccag
      241 acacggaaat gcagacgggc catcgtcacc ggatcgctta gcagcaccag gcgacgatcg
      301 cgattcagct tctctggcgt ctcgttaagc gcctgttcaa cgtggcggtc acgggcgatt
      361 tccagcacct tactggcgcg gtgacgcgcg gtcgccattg cggttgccag agcgttaaat
      421 gacgggttaa acaccgcgtg cataaaacca tcatcaaggg agcgttgacg attcatctca
      481 aggaagcgat cggtatcaac cagcacctgc ggcggtgaat actcttccgg gatcaggaac
      541 agtttccagt gtttggttcg cagaccaacg gtggcacggc tggaaatcac cgaaacaaac
      601 ggtgacagga tcaacgagaa gacaatcggt gccagccaga acaggaaacg cagatccagc
      661 cacgccatcc caacagccca cactaaccct aacagcagct gtgagccgtg gcgtttgaac
      721 gcttcacccc aggaagtgga gtcatcatca cgctgcggtg aattccacac cacttcccag
      781 ccaaggaacg cgctgacaac gaagaccgta tggaacagca tgcgtaccgg agccagcagc
      841 acggaaaaaa gcacttccag tagcaacgat aatgtaacgc gccagaagcc gccgtattct
      901 ttcgttcctt tgcaccagat aagcaaaatg ctcaataact tcggcaggaa caacagcacc
      961 atagtcgaag caaaaagtgc aatcgccagc tcaggacgcc actgcggcca caccgggaac
     1021 aactgccgtg gttgcaggaa gtattgcggt tcggtcaacg catgtactac ctgcaatgca
     1081 gtagagagcg cgaggaacat aaaccacagc ggagcggaga gataagacat cacgcccgtc
     1141 aggaacaccg cacggtgaac cgggtgcata cccttcacca ggaacagacg gaagttcatc
     1201 aggttaccgt ggcaccagcg gcggtcacgt tttagctcat caagcaagtt aggcggtaat
     1261 tcttcataag aacccgggag atcgtaagca atccagaccc cccaacctgc acggcgcatc
     1321 aacgccgctt ctacaaagtc atgtgacagg attgaaccgg caaaggaacc ttcgcccggc
     1381 agcggagcca gtgcgcagtg ctcgataaac ggtttcacgc ggataatcgc gttatgtccc
     1441 cagtagtgcg actcgccaag ttgccagaag tgcaaaccgg ctgtaaacag tggcccatac
     1501 acgcgggtcg cgaactgctg acagcgcgca tacagcgtat ccataccgga cgctttcggc
     1561 gacgactgaa tgatcccggc gttcgggttg gcttccatca ggcgcaccag cccgcacaaa
     1621 caatcaccgg tcattaccga gtcagcatcc agcaccacca tgtagctgta ctggctgccc
     1681 cagcgacggc agaagtcatc gatattaccg cttttacgct tcacgcggcg acggcggcgg
     1741 cgatagaaaa tctgaccttc gccaccgact tcagcgataa gctccatcca ggctttttgc
     1801 tctgcgacgc agatatccgg gttataactg tcactaagaa tgtagacatc aaagtgtttg
     1861 gcattcccgg tggcttttac tgattcccac gttgcacgca ggccagcaaa aacacggttc
     1921 acgtcttcgt tacagatagg catgatcaac gccgtgcgat gctccgggtt taatggttca
     1981 tcgccaactg ttgacgcaga tatactgtat ttatcgcgac caataagcag ttgcaggaag
     2041 cccattaacg ccgtccagaa tccggcggac acccaacaga acagtaccgc aaagaggatc
     2101 aggataccgg tttgcagcat ataaggcaga agctgcataa aggaaaccca caaatcctga
     2161 ccaaccatat ccataggatt aatcagcgcc caaccctgat aaggaagaat ggtcttcata
     2221 taccaggtcg cgacgacagt ttgcgcgagc gtcaggatca acagaatgta acggcggatg
     2281 gtaccgacgg tacgccactt ttgctcgctc tcctgctctt ctttggtcaa acgagccaga
     2341 tagcgcggcg tgacatcgcg tccacgcagg cgatcccaga aacggcctac cgggttggta
     2401 cgccacgggt cgggaaacat cgaggagcgt tttgcttctg gcatcgcctt cagctgatcg
     2461 cgcccttcgt cgtctttaat taactgtcca tcagcaagtg aatctggcca ggcttgttcc
     2521 agacgcgcct ttaccgagcc ttgcggggaa tcatcctccc gcgcccaggt gcggtgttcg
     2581 gcatccagcg cctgatgtac ggcgcggata tcagtcttcg gcaatgccgc tttctcgctt
     2641 gcggcgatgg gcattgcgtc aatgtactca gttgtcttat tcattggcag gtaactggta
     2701 gctccaggtt tcactcaacg tctgatcggc attcaccagc gcagcacgca tttcagtggt
     2761 tttcttggca tctttcactt tcacacgcat caccagacgc cagcctttgg taaccgggtt
     2821 atagcgcacc gtgctttcaa ctatctcacc attatcacca atgctggttt gcgctgtgac
     2881 cggggtatcc tctggcagtt ttttcatctc tgcgccggta aaatcgacca caaaggcgat
     2941 agtaccgtca ggctggcgaa tcaggttcga ctgcttcaca tcccccgttg aacgacgcgt
     3001 ttgttgcacc catgcgttat ctggcgcatg cagtttgtct tcatcacggc tgaaggtgat
     3061 ggtgtattta aagttcatct ctttacccgg ctccggcagc tgatccggcg tccagtaagc
     3121 gacgatgtta tcgttggttt catcgttggt tggaatttcc accagctcaa cgctgccttt
     3181 accccactcc cctttcggag tcacccatgc gcttggacga agatcgtaac gatcatcgag
     3241 atcttcaaag cgggagaaat cacgaccgcg ctgcaacaga ccgaagcctt gcgggttctc
     3301 catcgagaag ctgctaaccg ctaaatgttt cgggttattc aacggacgcc agatccattc
     3361 gccattaccg gcatggatag agagaccgtt agagtcgtgc aactccggac gatagttatt
     3421 tgcaggcgac ggttggttcg gcccaaacag gaacatactg gttaacggtg caccccccag
     3481 tttgccgact ttatcgcgca gatagatttt cgactgcaca tccacaaccg tgtcacgccc
     3541 tggcataacc acgaatttgt aagcacctgt cgcgcgcggc gagtcaagca atgcataaat
     3601 ggttaaacgt ttatcagtcg gttttggacg ctcgatccag aactctttga agcgtggaaa
     3661 ttcttcaccc gatggcaagg cggtatcaat tgccaggccg cgggcagaaa ggccataaac
     3721 ctgacctgca ccaatcacgc ggaaatagct ggccccgagc atgctgacga tttcatcgtt
     3781 tttatctttg ctgttgatcg ggtaaagcac tttaaaaccg gcaaaaccaa ggtcttttac
     3841 cgtgtctttg tcatgctgaa catcgccgaa agtgaaataa tccgggctgt atttgattcg
     3901 tttgactgcg gtggcagtca cttcatttat tttgaccggg gtatcgaagt acataccctg
     3961 atggtagaac tcgagtttga atggggtctt cagattgttc cagtacgctt tgtcatgatt
     4021 aaactggatc tgctgatagt ccgcgtattt catatcgcgg aaaacggagg gcaagttgct
     4081 tttgggcgcc tcatagcctt tcccggctaa ggattgagct tgctttgcga catcatcaat
     4141 actgaaagcc cagcttgaag atgtatacag ggttaacatt actgcagcac tcaaccaacg
     4201 cattttcatc atttgtagtt tatgtttcat aattagtaag cacttccccc tttgtgtgct
     4261 tatatcgatc cgatctattt taatggataa ccagccattc cgacaacaga atcccggtat
     4321 cgttcagcac gctggctcat ggattaagca cctgattgca accgttttca ctttccgtgc
     4381 ttctcctaaa gacagaagca tcgacttcgt gtagggtttg ccagcaattt tatttatcaa
     4441 ccgtcttaca gacgcttcca ttctggttag tggtagcgat tatgctatgc ataaaaacct
     4501 tgaagcctgc gcctggcgcg gtcaggtcgg tgtcgctatg gcaacaagcc taaaggcata
     4561 acccgacagg gataagacga aaaatccgag attagttaac catatatgaa tccagtaccc
     4621 gcgcaacgtg aatatttcct cgactccatc cgcgcctggc tgatgttgtt agggatccct
     4681 tttcatattt ctttaatcta ttcgagccat acatggcatg tgaatagcgc cgaaccgtca
     4741 ttgtggctga ccctttttaa tgacttcatc cactcgttcc gcatgctggt atttttcgtt
     4801 atatccggct acttttccta catgcttttt ttacgctatc ccttgaaaaa atggtggaaa
     4861 gtacgtgtcg aacgtgtagg tatcccgatg ttaacagcca tccccttact gacattgccg
     4921 caatttatta tgctgcaata cgtcaaaggg aaagcggaaa gttggcctgg gctgtcattg
     4981 tatgacaaat ataatacgtt ggcctgggaa ttaatatcac acctgtggtt tttactggtg
     5041 ttagtagtca tgacgacgct gtgcgtatgg atatttaaac gcatcagaaa taatttagaa
     5101 aattctgata aaacgaataa aaaattctcg atggtaaaac tatcggtgat ttttttatgc
     5161 ctcggcatcg gctatgcggt aataagaaga acgattttta ttgtgtatcc gcccattctg
     5221 agtaatggca tgttcaattt tattgtcatg caaacgctat tttatttgcc gttctttatc
     5281 ctcggtgcac tggctttcat tttccctcat cttaaagcct tgtttaccac gccgtctcgt
     5341 ggctgtaccc ttgcagcagc attggcattt gtcgcttatt tactcaacca acgctatggc
     5401 agtggcgatg cctggatgta cgaaaccgag tcggtgatca ccatggtcct cggtctgtgg
     5461 atggtgaatg tggtcttctc ctttggccac cgtttgctta acttccagtc agcgcgggtg
     5521 acttactttg ttaacgcatc gctatttatc tatctggttc accacccgtt aacgctgttt
     5581 ttcggcgcat acattacacc gcacatcacc tccaactggc ttggttttct ctgtggcctg
     5641 atattcgtag tagggattgc gataattctg tatgaaattc atttacgcat cccgttactg
     5701 aagtttttgt tttctggtaa accggttgtt aagcgtgaga acgataaagc accagcccgt
     5761 taagccacat ttacaataac cattccacgg gcaatatcga cgccagtctg accataaccc
     5821 gcttccagaa actggtggcg ggttcttttt tgagaataat ctctttcttt gcatgacgat
     5881 caacccagtt gatccgtccc cacctgtcca gacggagctg ccaggccgca tcatactggc
     5941 tctgtataaa gcgtttatca attaactgtg ccagcgtttc gctctctatc acgaagccca
     6001 tttcagtatt gagcaatgtc gaacgtggat cgaaattgaa agagccgata aacaccgttt
     6061 taccatcgat gctaaaggtt ttagcatgca ggctggcacc ggaattaccg gttatgccgc
     6121 gatcgtgtaa cgtactactt tgttcacgcg tcggcttgag ttcatataat tccacgccat
     6181 agcggagcaa ttttttgcgc cagcgcgcgt atccggcatg gacgacagca acatcgttag
     6241 cggcaagaga attggttagg atcgcaatct ttaccccttt tctcaccatc cgtaagagtt
     6301 gcgccacacc tgcgcgtgtc ggtacaaaat aggaagagat aatatcgatg cgttcactgg
     6361 gtgagcccat gatatcgaac aggcgctgcg gtaacagtga atgccgtttt gccttgccct
     6421 cccctttcgc cggatcatca cttaataaac gtgttttcgc ccagataagc ggcaacgttc
     6481 catcaaccag atgatttata aacggactgg attccatttg gcgtaagtaa cgatgcgtca
     6541 tggcatcgtt atgccaggag gcgggtaact cgatgcgatc cgccatttca ccttccggga
     6601 catccagcac ctgctgtaag ggtgaaaccg atttgcaata ccagtagcgg gcgaaatcat
     6661 cggcaacgtc ctctaccacg ggtcctattg ccataacatc taaatccgaa aaaagtggct
     6721 cttcccctgc cccaaaatag gcatcaccaa tatttcgtcc tcccaccaag gtaaccacgc
     6781 catcgacagt gaaactttta ttgtgcatac ggcgattgag acgggaaaag tcggtgatat
     6841 aaccaagcgg acgcagcaag cgaaacgaga aaggattaaa aagccggact tcaatgcggg
     6901 gatggctgtc aagcaagcgt aaaatatcgt caagtccggg cgtattgttg tcgtccagca
     6961 acaaacggac gcgaacgcca cgctttgctg cgactaacag ggcggaaaac agtaaccgac
     7021 ccgacatatc gtcctgccag atgtaatact gaacatccag cgtatgctct gccatttcgg
     7081 ccagacgata ccgggcggca aacgcatcca gacttttctc cagagggaaa agaccacact
     7141 gaccgggatg ttgcgaacac agtggcagca ccgcgctcgc cagccggggc aaatcattca
     7201 tctccttgtt gggtaaggag tctttcgtag aggtgggcgt tttcttcatc ataacagaca
     7261 aagtatacct gttcgggtaa agcgtgacgg gtaataaatt ctgaaacggt ttttactgcg
     7321 atttcagccg ctgccgcacg agggtaacca taaaccccag tactgattgc aggaaatgcc
     7381 actgacgtat agctgtttgc cgccaccagt cgcagactat tgagataggc atcctgcaaa
     7441 agctggtctt cgttttgttc accaccacgc cagactggcc cgacggtgtg tactacggct
     7501 ttagcgggaa gatcgcctgc aagcgtaata acggcatgcc ccgtagggca atcgccctgc
     7561 tgttgcctga cttttaaaca ggcatccagc agggccggac ccgctgcgcg atgaatggcc
     7621 ccatcgacgc cgccgcctcc cattaatgac ggattagccg cattcacaat cacatcaacg
     7681 gccagtttgg taatatcacc ctgcacaaca tgaatacgcg ttttcataac gcctccttaa
     7741 caccttcttg tttcttaagt gtacagcagg ctttttggtt aaatcgcatt tttctactca
     7801 gcaacgtgcg ttgttcagaa acttagttat attcgatgtt cattacagcc agctttttct
     7861 gtttatcaat atactgcact tttactgagg ctacttgcgc gtttttgaca ttgccgctca
     7921 ttaacgcttt gctggaatag gtttttcccg gaacagaacc attctgtggg cagttcattt
     7981 ctacgggtga tgactgggtg ctgacgtcac atgccggttc cacaatttgg ccataaaaat
     8041 ggatcacgcc cccttgcgcg gtgcttcctg cgatggcaat aaaaggaaaa aaaaactgcc
     8101 gagcataaga gagtttaaaa aaggtctgaa catttattct atttcctcaa tgattagtca
     8161 tccttgaggg ttgtgttatc catactttca ggttggctga ttcgcagcag accattctct
     8221 ccagattcat cttatgctcg acatttcaac aaattaagac ttttctgaag agggcggcca
     8281 ttgttgtgat aaatgaagtg cctgtccatc agaaacagta acaactattt tcacccgatc
     8341 ttccggggaa atatttaaac tcaacttcgt caaagcaata ggttgattag caggcaatga
     8401 gagggtcttt tcttgcttcg tctgactttg ccctgaaccg ccttcgcgca gg
//
LOCUS       DADKRT010000181         8313 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.184, whole genome shotgun sequence.
ACCESSION   DADKRT010000181 DADKRT010000000
VERSION     DADKRT010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8313
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.184"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(95..1765)
                     /locus_tag="JQ356_003538"
     CDS             complement(95..1765)
                     /locus_tag="JQ356_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscC"
                     /protein_id="HAY4623515.1"
                     /translation="MDNAELTIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS
                     MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL
                     KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL
                     HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEIHASAGDSFLGGEDFTHMLVDEVLKRA
                     EVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLL
                     NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV
                     ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV
                     ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL
                     LEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKQEE
                     LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP"
     gene            complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="JQ356_003539"
     CDS             complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="JQ356_003539"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HAY4623516.1"
                     /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK
                     TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
                     TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHIEDTERFRAIGNPVSTIVAE
                     LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVV
                     DYYYLTDNKPNATVMVDVDRQGFVDLLADRLKFYA"
     gene            complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="JQ356_003540"
     CDS             complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="JQ356_003540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020457015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HAY4623517.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
                     PKDAFFDDPKSDRAKDFLAKILH"
     gene            complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="JQ356_003541"
     CDS             complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="JQ356_003541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HAY4623518.1"
                     /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
                     RLSSFAPVAWFAKAYVNIFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
                     AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY
                     LKRRTA"
     gene            complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="JQ356_003542"
     CDS             complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="JQ356_003542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
                     /protein_id="HAY4623519.1"
                     /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF
                     LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA
                     ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL
                     LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
                     YVLINAIIMLVMTLVERKVRLPGNMGGK"
     gene            complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="JQ356_003543"
     CDS             complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="JQ356_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter
                     substrate-binding protein GltI"
                     /protein_id="HAY4623520.1"
                     /translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV
                     GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL
                     QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKDKAVVVTS
                     GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK
                     PDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP
                     KNLNMNFELSDEMKALFKEPNDKALN"
     gene            6574..>8313
                     /locus_tag="JQ356_003544"
     CDS             6574..>8313
                     /locus_tag="JQ356_003544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HAY4623521.1"
                     /translation="MSASSVKPLNVQLPAITLILFALCIGIFCYLAQWMSYEEVDQSA
                     LIHLGANVAPLTLSGEPWRLLSSIFLHSSVSHLLMNMFAFLVVGGVAEQILGKWRLLI
                     TWLFSGVFGGLISACYALRDSDQIVISVGASGAIMGIAGAAIATQLASGAGTYHKNQR
                     RVFSLLGMVALTLLYGARQTGIDNACHIGGLIAGGALGWLSARLSGQNRLVTEGGIIV
                     AGSLLLTGAIWLAQQQMDESVLQVRQSLREAFYPQEIEQERRQKKQQLAEERNALRET
                     LSAPVSREQASGDLLAEIADIHDMAISRDGNMLYAAIENTNSIVVFDLGQKKILHTFT
                     APIAKEKSVKHCGGCKDQGVRSLALSPDEKLIYATSFEANALSVINVATGEIIQSITT
                     GAHPDSLILSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDGAGTSGKPGAWV
                     MALSPDERTLLVPGAGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGEVIFAD
                     SQGISRISVGDQQASIMTQWCSRSVYSVEGISPDGQYLALVSYGLQGYVILLNINAGQ
                     IIGVYPASYVNHLR"
BASE COUNT         2073 a         2054 c         2077 g         2109 t
ORIGIN      
        1 atgctctcgg caaaatcgcg atgttgttta gttgacgatg tgttttttgc gccgatgccg
       61 gatgcagcgt ttacgccgca tccggcagcc gtgtttatgg gatctcaatg gctaaataat
      121 cgctcgcccg ccgccgaact tcatccacgc gggccatgtc gtttgactgt agcgccgcat
      181 caaaatcggt gatcacccgg ccaatctctt ctcgctcgtc acccagcgct cgcgcccaca
      241 actcttcctg tttggcttta aaggtgcgat tgatgagcat atcgcgcgga taaattttca
      301 atgcggataa ccgcgtccga ctctcttcaa tctgctgcgc gctcaatgtt accgggctgt
      361 ggttaatcac tctggactta acgctgccgt cttccagaag cacgtcaact tcaagcaacc
      421 cgttgatatc ataactaaag cgaatatcaa tcgactgata agccccggtt ttcttcaacg
      481 gcacatcgaa ggattcaacc agaatgttat ttttaacttt gtggttttct ccctgataga
      541 cgttaaccgt aattgaatcc tgctccgggt gcatggtcga gtaagtttct acacgcgaca
      601 ccggtactgt ggtgtttcgt tcaataatcg gcgagaaaat gccggaaacg ccctggcggt
      661 taacttcaac gcccaacgag taagggcaaa tatcagtgag gattacctct tcaatatctt
      721 cactgcgtaa gcggcaggcg gcctggattg ctgcgcccag cgcgacaatg gtgctcggat
      781 cgtaactttg atacggtaat ttgccaaaca gacgcacggc gattcgctgc accagcggca
      841 tttgtgacgc gccgccaacc agcaccagac tgtcgatttg actcggcttc agacgcgcat
      901 cgcgcaacgc ctgttcaatc ggcactcgca agcgattgag cagcggcaac cacaaatctt
      961 ccagttcgtt ctcgtaaaat tcgcattccc gcgtttcttc ctgatactgc cagcgaatgt
     1021 gcaatggcga ttgattgcta cattttgccg cttccacaca ggcgtacaag gctgccagtt
     1081 cactctcgtt aagcgtggtc ctggcaactt ccgcgcgttt taaaacctca tcgaccagca
     1141 tatgggtaaa atcttcgcca ccgaggaagc tatcgccagc ggaggcgtga atttcaatca
     1201 ccggcgtggc gtactcaagc accgtaacgt caaacgtgcc gccaccgaga tcaaaaacca
     1261 gcgagcgggt attttgttgc gtatgcaggc catatgccat cgcagctgct gtgggttcat
     1321 taattaagcg taccgcattt aacccggcta actccgcagc taaacgggta tgcttgcgtt
     1381 gttcatcgct gaaataagcc ggaacggaga tcaccacatc tttaatcgga cgttgcagaa
     1441 attcttcggc atcttctttt aatgagcgta ataccaaaga ggacagttct ggcgcgttaa
     1501 atgtgtcgct gcctaaccgc cagttggtat tactgcccat tgcgcgttta aataacgctg
     1561 ccgttttatc cggatgcgaa gtacgccgtg atacagccgg ttttccgact aaaatatgat
     1621 tattttcatc catgctaatt atggatggtg ttaaatattc accgaactta tttggaatta
     1681 attgcgcggc accgtctttc cagacggcaa ttaaactatt ggtagtgccg agatcgatac
     1741 caatggtgag ttctgcatta tccattgcat ttatatcttg aaagaaaaag agataaacag
     1801 attaagacca cccaggtaac gcgtggtgat cttaatcaat gacgtgtgtt aagcgtaaaa
     1861 tttcagacga tcagccagta aatcaacaaa gccctgacga tcaacatcga ccattacagt
     1921 ggcattcggt ttattgtcag tcagataata ataatcaaca accgtcatac cctgggtata
     1981 tttcccctgt gtttccacgc caacccagcg ctcaacagtg gtaaacaact cgggtttcaa
     2041 cagccaggcg atggtgcatg ggtcatgcag cggtgcaccg acaaagcccc atttttcgtc
     2101 tttatgatat tcgaggaaga aatccagcag ttcggcaaca atggttgaaa cagggttgcc
     2161 aatcgcgcgg aaacgctcgg tgtcttcaat gtggatttgc gctttatgag taacatccag
     2221 accggccatc accactggga tccctgactg gaagacaatt tctgccgctt ccgggtcaac
     2281 gtaaatatta aattcagccg caggcgtcca gttaccaagc cccattgcgc cgcccataat
     2341 cacgatacgg gcaattttgc tatgcagttc cggatggcta ttgagcagca aggcaacgtt
     2401 agtttgcggt ccggtagaca caatcgtgac aggttccgca ctttcgcgca gcgttttcgc
     2461 catcagctct accgccgtac agttttgcgg tgcgaacgtc ggttccggta atgccgggcc
     2521 atccagaccg ctttcgccgt gcacattgtc cgcgataatc aactcacgca ttaacggttt
     2581 taccgcgccg cctgctaccg gaatatcggt gcgattaagc aaggtcagca tacgcagaac
     2641 attgcgtaag gttttttctg gtgtctggtt tccggcggaa gacgtaattg ctttgacatc
     2701 aagctctggt gaggcgaggg cgagaactat tgcgatagcg tcgtcatgac ctgggtcgca
     2761 atctaacaga attggcagtg ccattgttgc tccttgttgt gtgcttcttt gcgacaaggg
     2821 taacgccagg atgtaacaga tacgaggggc gaaacgataa agcgtgagat ggcgcgcact
     2881 tgggtatgcg cgccagagtg attaatgcag gattttcgcg aggaagtctt tcgcgcggtc
     2941 cgatttcgga tcatcgaaga aagcgtcttt cggcgagtct tcgacaattt taccctcgtc
     3001 cataaagatc acccgattcg ccactttgcg ggcaaagccc atttcgtggg tcaccaccat
     3061 catggtcatt ccttcgttcg ccagttccac catcacgtcc agcacttcgt tgatcatctc
     3121 cggatccagc gccgatgtcg gttcgtcgaa cagcatcgca ataggatcca tacacaacgc
     3181 gcgagcgatt gccacacgct gctgctgacc gccggaaagc tgcgccggaa atttattggc
     3241 atgtgcggaa agtcccacgc gctccagcaa tttcaatgct ttttcacgag cgggcgcttt
     3301 atcgcgttta agcactttca cctgcgccag agtcaggttt tcaataatcg acaaatgggg
     3361 gaacaactca aaatgctgga acaccatccc gacgcgggaa cgcagctttg ccagatcggt
     3421 tttcttgtca ttaaccacga taccatcgac ggtgatttca ccttgctgca ctggttcgag
     3481 gccgttgacg gttttaatca gcgttgattt gccggaacca gacgggccgc aaaccaccac
     3541 cacttcgcct tttttcactt cggttgagca gtcggtcagc acctgaaagt gaccatacca
     3601 ttttgaaaca tttttcaggg taatcattat gctgtccttc ttttcaagta gctgaccaac
     3661 aacgacgcgc taagactaat aacgaaataa acaaatccgg caaacaggat catctcaacc
     3721 tgcgtaccat cacgctcacc aatggttgag gcggtacgga agaaatcggc cagagataac
     3781 acatacacca gtgaggtatc ctggaacagt acgatgccct gagtgagcag aagcggcacc
     3841 atcgcgcgga acgcctgcgg cagaataatc agtttcatcg actgccagtg agtcattccc
     3901 aacgccagcg cggcgctcga ctgaccacga gaaatacttt gaataccagc acggataatc
     3961 tctgaatagt aggccgcttc aaacatcgaa aacgccacca tcgccgaaat taaacggata
     4021 tcattttttg gtgataatcc cagcacgttt tgcagaaaac ctggcacgat caggtaaaac
     4081 cacagcaaaa ccataactaa aggaatcgag cggaatatgt taacgtaggc tttggcaaac
     4141 cacgctacgg gcgcaaagct ggacaagcgc atcaccgcca gcatggtgcc ccacaaaata
     4201 ccaatcacga ctgccgtgac ggtgattttc agcgtgatca ccagcccgtc gagcagatat
     4261 ggcagggaag ggacaatgga actccagtca aactcgtaca ttatttgccc cccatgttgc
     4321 caggcaggcg aactttacgt tcaaccagcg tcattaccag catgataatc gcgttaatca
     4381 acacatacgc cagcgtaata gcggtaaacg actcccaggc gtgggctgag taatcaagca
     4441 atttacccgc ctgcgccgcc atatccacca gaccaatagt cgaggcgatg gcggagtttt
     4501 tcaccaggtt catcatctcg gaagtcatcg gcgggacgat aacgcgataa gcattaggca
     4561 gcagtacgta tcgataagcc tgcggtagcg tcaggcccat cgccagcgcg gcattttttt
     4621 gcccacgcgg caacgactga atggcggcgc gtacctgttc gcaaacacgg gcggcggtaa
     4681 acagccccag gcagagcatg gatgaaagga aaaactgaat attgggatcc agctcggcct
     4741 taaaccacat gccgattttc tccggcaaca gctccgggat caccagatac caggtaaaga
     4801 attgcacaat caacggcacg ttgcggaaca gttcgacata caacgtaccc agaccggaga
     4861 gaaaacggtt tggaacggta cgtaaaatgc cgaaaaatga accgacgagg aaagcgataa
     4921 tccaggcgca gatcgacaaa gcgatcgtca cctgaaaacc actccagatc caaccaagat
     4981 aggtggtgtt gccgaacggg gcttgttgta aaaaaatacc ccagttccag tctatagaca
     5041 taaatctact ccagaaaaaa gagggtagca gcgttaactg ctaccctcga agattgttac
     5101 ccagcgtatt gcggttttca ggcccgatgg ggaacgacca tcaggcgtat agtctgtccg
     5161 tgctacgtaa caatcgagag ggctggaatt tccgcccctg gttcttgtaa ttagttcagt
     5221 gctttgtcat tcggttcttt gaacagtgct ttcatttcgt ctgacagttc gaaattcatg
     5281 ttcaggtttt tcggcggaat tggatttttg aaccatttat caaaccattt ttccgcttca
     5341 ccggaagtct gcacctgagc gatagtgtca tccatcagct ttttgaactg cggatcatct
     5401 ttacgcaaca tgcaaccgta ggcttcctga gactgcggct tgccgacgat atcccagttg
     5461 tctggtttct tcgctttcgc acgttcaccg gccagcaggg catcatccat cataaaggca
     5521 acggcacgac cgctttccag ggtgcggaaa gagtcaccgt gatctttggc gctgatgatg
     5581 cgcatattca ttttttgctc ttcattcagt ttgttgagca aaacttcaga ggtagtgccg
     5641 gaagtgacga ctacggcttt gtctttcagg tcggcaaaat ctttgatatc gccgcccttt
     5701 ttggtcagca ggcgcgtacc gaccacgaaa atagtatcag agaaagccgc ctgtttttgg
     5761 cgttcgacgt tgttggtggt agaaccacat tcaaaatcga aagtgccgtt ttgcagcagt
     5821 ggaatacggt tttgtgaggt aatcggaatc agttttacct gcaagtccgg tttgttgagt
     5881 ttctttttca ctgcttcaac aatggcgttg gagtaatcct gcgagtaacc caccactttt
     5941 tgctgattgt cgtaataaga gaaaggtact gaagattcac ggtgaccgac gacaatcaca
     6001 ccgtttttgg cgattttgtc cagcgtactg cctgctgccg gggcggcgtc atctgcctgt
     6061 gccagtcctg cggaaagcgc cagggcgagg attgctgtgg caggtttacg taattgcata
     6121 tccaactcct ttatcttctg cgttaagaac gcatggatac ccgttgtgag tgtttgtgtt
     6181 gttatcgtct gcaactttat tgtgcagtgt tgtgcctgtt aggtaacatt tagtttggct
     6241 aaatgtaaag atattgctgt tttattgttt gtttttgcga gatgcgccgc accattccga
     6301 agcaaaattc ttaaaccgca cctttttggt gctaccgctg atttgtggtg gtgcaacctg
     6361 gttgcgtcgc ggctgatttc atcgcttaca cagtaaataa agcaacttac atgccaaaaa
     6421 atacttaggg gcaaattaat tacgattgta attttaggct gaaaaagtca tatttcggac
     6481 agaattatct tttcggcatg ggacgtttgc cgggatgata actgcacacg ggaaaaatgc
     6541 tttttacctg tcttttcaag gaagaaacac cttatgtctg catcttcggt taagccgtta
     6601 aatgttcaat tacccgcaat aacccttatc ctttttgcac tctgtattgg gatattttgt
     6661 tatctcgcac aatggatgag ttatgaagag gtcgatcaat ccgcacttat ccatctcggc
     6721 gcaaacgttg cgcctcttac tttgtcgggt gaaccctggc gcttattgag cagtatcttt
     6781 ctgcacagta gtgtttctca tctgctgatg aatatgtttg cattcctggt cgtgggaggc
     6841 gtggcggaac agattctggg gaaatggcga ctcctgatta cctggttatt ctccggcgtc
     6901 tttggtgggc tcatcagcgc ctgttatgcg ttacgcgata gtgatcagat agtcatcagc
     6961 gttggggcat ccggggcaat tatgggaata gctggcgctg cgatagcaac acagcttgct
     7021 tcaggtgcgg gcacatacca taaaaaccag cggcgagtat tttctctgtt gggtatggtg
     7081 gcgctgacac tgttgtatgg tgcccggcaa acaggaatag ataatgcttg tcacattggc
     7141 ggcctgattg cgggtggcgc gttgggttgg ctgagcgcgc gtttatctgg gcaaaaccga
     7201 ctcgttacgg aaggcgggat tattgttgcg ggcagtcttc ttctgaccgg ggctatctgg
     7261 cttgcgcagc agcagatgga tgagtcagtt ttacaagtca ggcaaagcct gcgtgaagcg
     7321 ttttatccac aggagattga acaagagcga cggcaaaaaa agcagcagtt agcggaggaa
     7381 cgcaacgccc tcagggaaac attatccgct ccggtaagtc gtgaacaggc cagtggtgat
     7441 ttgctcgctg agattgccga tatccatgat atggcgatca gtcgggatgg taatatgttg
     7501 tatgccgcaa ttgaaaacac gaacagcatt gttgttttcg acctcggaca aaagaaaatc
     7561 ctgcatacct ttacagcgcc catagcgaaa gaaaagtcag tcaaacattg tggtggctgt
     7621 aaagatcagg gcgtcagatc gctggcatta agcccggatg aaaagttgat ttatgcgact
     7681 tcatttgaag cgaatgcgtt atcggtcatt aacgtggcga caggggagat tattcagtcg
     7741 attaccaccg gtgcacatcc tgacagcctt atcctctcgc gtgatggcac aaaagcctgg
     7801 gtgatgaatc gcaccagtaa tagtgtgtca gcgattgatc tggtgactta tcagcatgtg
     7861 gcggatatcc cgctggagaa atacgacggg gcggggacga gcggtaaacc aggcgcctgg
     7921 gttatggcac tttccccgga tgaaagaaca ttactggttc cgggagcagg cagaggtaac
     7981 atcgtgcgga tcaataccat cacgcatcag aaagaagact ttcccgcagg tgatgcgcgt
     8041 ggaacgatat cggcgatgcg ttttcgacct gaaaacggcg aggttatttt tgcagatagt
     8101 caggggattt cacgtataag cgtaggggat caacaagcca gcattatgac gcaatggtgt
     8161 agcaggagcg tttattccgt tgagggtatt agcccggacg gtcaatattt agcgttggtg
     8221 tcatatggcc tgcaaggtta tgtcatcctg ctcaatatta atgccgggca gattattggc
     8281 gtttatcctg ccagctacgt taatcacctt cgt
//
LOCUS       DADKRT010000182         8242 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.185, whole genome shotgun sequence.
ACCESSION   DADKRT010000182 DADKRT010000000
VERSION     DADKRT010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8242
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.185"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..864)
                     /locus_tag="JQ356_003545"
     CDS             complement(<1..864)
                     /locus_tag="JQ356_003545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY4623522.1"
                     /translation="MKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGA
                     ATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPP
                     SLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPD
                     LPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRL
                     PELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQALQRLTSSPDYH
                     GPRIYFSMSDGQ"
     gene            956..1042
                     /locus_tag="JQ356_003546"
                     /pseudo
     CDS             956..1042
                     /locus_tag="JQ356_003546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869530.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1052..1132)
                     /locus_tag="JQ356_003547"
                     /pseudo
     CDS             complement(1052..1132)
                     /locus_tag="JQ356_003547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416850.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            1343..1432
                     /locus_tag="JQ356_003548"
                     /pseudo
     CDS             1343..1432
                     /locus_tag="JQ356_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311139.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
     gene            1576..5970
                     /locus_tag="JQ356_003549"
                     /pseudo
     CDS             1576..5970
                     /locus_tag="JQ356_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311138.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
     gene            5971..7620
                     /locus_tag="JQ356_003550"
     CDS             5971..7620
                     /locus_tag="JQ356_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2300 domain-containing protein"
                     /protein_id="HAY4623523.1"
                     /translation="MNWRRIVWLLALVTQPTLAEETPLQLALRGAQHDQLYQLSSSGV
                     TTVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD
                     TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA
                     TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD
                     GTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST
                     TAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE
                     AKSTPPEAAKAMTVAIHTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT
                     QDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS
                     TCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN
                     FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD"
     gene            7625..>8242
                     /locus_tag="JQ356_003551"
     CDS             7625..>8242
                     /locus_tag="JQ356_003551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623524.1"
                     /translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF
                     SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKIQQGRLVVNGASMPQRVESDGSF
                     ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV
                     VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQV"
BASE COUNT         2011 a         1981 c         2316 g         1934 t
ORIGIN      
        1 ttgtccgtca ctcatggaga agtaaatccg tgggccgtgg tagtccggcg aagaggttaa
       61 tctttgcagg gcttgcagag tgcgagtcga caatggattg ttataaatat taacatctgc
      121 ataaatgtgc agattcatga tactgtctgg caatgtgttc agctgattgt tagggatata
      181 tagtgattgc agacgttgtg gaagttcggg cagtctgtgt agttggtttt ccccaacgtt
      241 taaaagcctc agattttgag gaaggggcgg tagctcttgt aatctgttat caaaagcact
      301 tagttcctgt agttcacatg gtaattctgg taaggcagta agctggttgt tgccaacaga
      361 aagtttttgt agagccgggg gaagatcagg tagcgtctcc aggctattga gaagggctga
      421 gagtgactgc aaggaagatg gaagagaagg taaacatgtt aaaactctgt taagtgaaac
      481 atcaagagcg accaggtgag gcggaagagc cgggagcctg ctcagtctgt tatcgctggc
      541 tttaagtaca gttaaggacg gagggagttc tggcagagag cgtagctcat tgctagagat
      601 gttaagttct tgtatgtgcg ggggcaggta tgggagagag cgtaatctga gtaaacttaa
      661 attgagggct ggctcttgaa aagccagaca tattttcagt aatcgaactg cctgtgttcg
      721 gtcttctgtt gcagcacctt ccttggccca gttatcccag atgcggtgat aatccgtgat
      781 attttgctct tctacggata aacgggatat acatcctaaa ccacaaaagg agcggaaaaa
      841 agaaggattg tgggcaggtt tcatttatta ttgatcctca ttgtttatat attaatatgt
      901 tcgtgcaaat ggagtgagga ttctttaaaa aaacgctcct gtaaatagtt aagaacagga
      961 agaactgttg gggatgtggc tggccgaaaa tgaaggggtg aagttctggc tcaatgtgct
     1021 gactgaactg aaaaaacgcg gttggtcgcc ctaccttttc atcaagccag tagtctgccc
     1081 accactgcat catttctctg cgcttatcga gatactgagc atggttgtaa attcaactaa
     1141 cccagtgcgt tgacaaaaaa ttagcgcaag aagacaaaaa atcaccttgc gctaatgctc
     1201 tgtatcaggt cactaatacc agctaagtag ttgattcata gtgactgcat atgttgtgct
     1261 ttgtcgcatt ttgtagtcta ttatttaatc tgtaacaacg ataatacaat gaattttaat
     1321 tggtttttgt gattttgtcc ttcttctgac atggaaggac acccgatgga tacccaacga
     1381 ttccaatccc aatttcattg gcatttatcg tttaaatttt ctggcgcgat agcagcgtgc
     1441 ttgtctctgt ctcttgtggg aacagggctt gctaatgctg atgattcgct tccttccagt
     1501 aactatgcgc cgcccgccgg gggaacattc tttttgcttg ctgacagcag ttttagcagc
     1561 agtgaagagg cgaaagtgcg actggaagcg ccggggcgtg attatcggcg ctatcagatg
     1621 gaagagtacg gcggcgtgga cgttcgcctg tatcgtattc ctgacccgat ggcatttttg
     1681 cgccagcaga aaaacctgca tcgcattgtg gtgcaaccgc aatatctggg cgacgggctg
     1741 aacaatacgc tgacctggct gtgggataac tggtacggca aatctcgccg cgtaatgcag
     1801 cgtactttct cttctcagtc acggcagaat gtgactcagg cattacccga attacatctc
     1861 ggcaatgcca ttattaaacc ttcccgttat gtacagaaca accagttttc cccgctgaaa
     1921 aaatatccct tggtggaaca gttccgttat ccactatggc aggctaaacc ggtcgagccg
     1981 cagcaagggg taaaactgga aggcgcatcc agcaatttca tctcgccgca gccgggtaac
     2041 atttatattc ctctcggcca acaagagccg ggactgtacc tcgtcgaggc gatggttggt
     2101 gggtatcggg cgacgacggt ggtgtttgtt tccgataccg tggctcttag caaagtgtca
     2161 ggcaacgagc ttctggtgtg gaccgcgggt aaaaaacagg gtgaagcgaa gcccggctca
     2221 gagatcttgt ggactgacgg tcttggcgtg atgacccgcg gtgtgaccga tgacagcggt
     2281 accttgcagt tacaacatat atcgccagaa cgttcataca ttctgggtaa ggatgctgaa
     2341 ggcggcgttt ttgtctccga gaacttcttc tacgaaagcg aaatctacaa cacccgcttg
     2401 tatattttta ccgatcgccc gctatatcgc gcaggcgatc gtgtcgatgt taaagtgatg
     2461 ggccgcgagt tccacgatcc gttgcattca tcccccatcg tcagcgcccc ggcgaagctt
     2521 tcggtgctgg acgctaacgg cagtctgttg caaaccgtcg atgtcacgct ggatgcgcgc
     2581 aatggcgggc agggaagttt ccgcctgcca gaaaatgccg ttgccggagg ttatgagtta
     2641 cgtcttgctt accgcaatca ggtctatagc agcagttttc gcgtggcaaa ctacatcaag
     2701 ccacatttcg agattggttt agctctcgac aaaaaagagt tcaaaactgg cgaagcggtc
     2761 agcggcaaac tgcaactgct ctacccggat ggcgagccgg taaaaaatgc ccgcgtgcag
     2821 ttaagtttgc gcgctcagca attatcaatg gtcggtaacg atttgcgtta tgccggacgt
     2881 ttccccgtgt cgctggaagg cagcgaaacg gtgtccgacg ccagcggtca tgtggcgtta
     2941 aatctccccg ccgccgataa accgagccgt tatttgttaa ccgtctccgc cagtgacggc
     3001 gcggcgtatc gtgtcaccac caccaaagag atcctcattg aacgcggtct ggcgcattac
     3061 tcattaagta ctgccgcaca atacagtaat agcggcgagt cggttgtgtt ccgttatgcc
     3121 gcgctggaat cttcaaaaca ggttcctgtt acgtatgaat ggttgcgtct cgaagaccgc
     3181 acgagccata gcggagagct accgtcaggc ggcaaatcct ttaccgtcaa tttcgctaaa
     3241 cctggcaact acaatctgac attacgcgat aaagacggct taattctcgc tgggttaagt
     3301 tatgccgtca gcggtaaggg cagcacggcg catacgggta cggtagatat cgtggcggat
     3361 aaaacgctgt accagccagg cgaaaccgcg aagatgctga ttacctttcc ggagccaatt
     3421 gatgaagcat tattgacgct ggaacgcgat cgcgtggaac agcagtcgct gctttcgcat
     3481 ccggcaaact ggctaacgct acaacgttta aacgataccc agtatgaagc ccgggttcca
     3541 gtgagcaatt cctttgcgcc taacatcact ttttcggtgc tgtatacccg taatggtcag
     3601 tacagttttc agaacgccgg gatcaaagtt gccgttcctc agcttgatat ccgggtgaaa
     3661 acggacaaaa cccattacca gccaggtgaa ctggtcaatg tcgaattaac ctcgtcgctg
     3721 aaaggtaaac ctgtttctgc gcagctaacg gtaggcgtgg tcgatgaaat gatctacgcg
     3781 ctgcaaccag aaatcgcgcc gaatatcggc aaatttttct atccgctggg gcgtaacaat
     3841 gtgcgtacca gctccagtct gtcgtttatc agctacgacc aggcgctctc cagcgagccg
     3901 gttgcgcctg gcgcaactaa ccgcagcgag cggcgagtaa aaatgcttga acgtccacgg
     3961 cgtgaagagg tggataccgc ggcatggatg ccgtcactca caaccgataa acaaggcaaa
     4021 gcgtatttca cgttcctgat gcctgattcg ttaacccgct ggcgtatcac cgcgcgtggg
     4081 atgaacggcg acgggctggt cgggcagggg cgtgcttatc tgcgttcgga aaaaaatctc
     4141 tacatgaagt ggagtatgcc aacggtgtat cgcgtgggcg acaaaccggc ggcaggactg
     4201 tttatcttca gtcagcagga taacgaaccg gtggcgctgg tgactaaatt tgcaggcgct
     4261 gagatgcgcc agacgctgac gctgcacaaa ggggcgaatt atatttcgct ggcgcagaat
     4321 attcagcaat ctggcttgtt aagtgcagaa ctgcaacaaa atgggcaagt gcaggacagc
     4381 attagcacaa aactgtcttt tgtggacaac agcaggcccg ttgaacagca gaaaaatgtc
     4441 atgctcggcg gtggcgagaa cgcgctgatg ttgcccgagc aggcgagtaa tatccggcta
     4501 caaagtagtg aaacgccgca ggagattttc cgcaacaatc ttgatgcgtt agtcgatgaa
     4561 ccgtggggtg gggtgatcaa caccggtagc cgtctgatcc cgctcagtct cgcctggcgt
     4621 tcgcttgccg atcatcaaag tgccgccgct aacgacattc gtcagatgat tcaggataac
     4681 cgtctgcggc tgatgcaact ggcggggccc ggagcgcgct ttacctggtg gggtgaagat
     4741 ggcaatggtg acgccttcct tacggcatgg gcatggtacg ccgactggca ggccagctag
     4801 gcgctcggcg taacgcaaca accggaatac tggcagcata tgctcgacag ttatgccgag
     4861 caggcggata acatgccgtt attgcatcgg gcgctggtgc tggcgtgggc acaggagatg
     4921 aatctgccgt gcaaaacgtt gttgaaaggg ttggatgaag ctatcgcccg gcgcggaact
     4981 aaagatgaag atttctctga ggaagacatc cgcgatatca atgacagcct gatcctcgat
     5041 acaccggaat ctccactggc agatgcggtg gcaaacgtct taaccatgac gttgctgaaa
     5101 aaagcgcagt tgaagtccac ggtgatgcca caggttcagc aatatgcgtg ggataaagcg
     5161 gcaaacagca atcagccgct ggcgcacacg gttgtgctgc tcaatagcgg tggtgacgct
     5221 acccagacgg ccgctatttt aagtggtttg accgctgagc aatccactat tgagcgcgcg
     5281 ctggccatga actggctggc gaaatatatg gcgacaatgc ctccagttgt tttgcctgcg
     5341 cctgcgggcg catgggctaa acataagtta actggagggg gcgaatactg gcgttgggtt
     5401 ggtcagggcg tgccggacat tctctctttt ggtgacgaat tatcgccgca aaatgtgcag
     5461 gtccgctggc gtgagccggc aaaaatggct caacaaagta acattccggt gaccgttgaa
     5521 cgccagttgt atcggcttat ccctggtgaa gaagagatga gctttattct gcaaccggtg
     5581 accagcaatg agattgacag cgatgcgctg tatctcgatg acatcacgct taccagcgag
     5641 caggatgcag ttctgcgcta cggtcaggtg gaagtaccgc tgccaccggg agccgacgtt
     5701 gagcgcacaa catggggcat ttcggtcaat aaacccaacg ccgcgaaaca gcaggggcaa
     5761 ttgctggaaa aagcgcgaaa tgaaatgggc gaactggcct atatggtgcc ggtgaaagaa
     5821 ctgacgggaa cggtcacttt ccgccatttg ctgcgcttct cgcaaaaagg gcaattcgtt
     5881 ctgcctcctg ctcgttatgt gcgttcctat gcacctgcac agcaaagtgt tgcggcaggg
     5941 agtgaatgga ccgggatgca ggtgaaataa gtgaactggc gcagaatcgt ctggctattg
     6001 gcgttggtta ctcagccaac gcttgcggag gagacgccgt tacaactggc actgcgtggt
     6061 gcgcagcacg atcaactgta tcagctgtcg tcatcaggcg tgaccacagt ctcagcatta
     6121 cctgactcgc tcaccacgcc gttagggagt ttgtggaaac tgtatgttta cgcctggctg
     6181 gaggataccc atcaaccgga gcagccctac cagtgtcgcg gaaactcccc ggaagaggtt
     6241 tattgttgtc aggctgggga gagcataacg cgcgataccg cgctggtacg ttcctgtggg
     6301 ctctattttg cgccgcagcg gttgcatatt ggcgcagatg tgtgggggca atactggcaa
     6361 cagcgtcagg cgcctgcgtg gttagcgtct cttactacgc tgaagccaga aacctcggta
     6421 acggttaaat cgctgcttga ttcattagcg acgttacctg cgcaaaacaa agctcaggaa
     6481 gtcttactgg atgtggtgct ggacgaggcg aaaatcggtg tcgcatccat gctcggtagt
     6541 cgggtacggg tgaaaacctg gagctggttt gccgatgata aacaggaaat ccgtcagggt
     6601 ggttttgccg gctggttaac cgatggtaca ccgctgtggg ttactggcag tggcaccagc
     6661 aaaacggtac taacccgtta tgcgacagtg cttaatcggg ttttgccagt gccgacgcag
     6721 gttgccagtg ggcaatgtgt agaggtggag ctgtttgccc gctatccgct gaagaaaatc
     6781 acagcggaaa agagtacgac ggcagtaaaa cccggcgtac ttaatgggcg ctatcgtgtg
     6841 acgtttacta atggtaacca cattacgttt gtcagccacg gtgagacgac cttactgagc
     6901 gaaaagggca aactgaaatt gcagtcgcat ctcgatcgtg aagagtacgt tgccagagtt
     6961 ctggatcgcg aggcgaaaag tacgccccct gaggcagcga aagccatgac cgtggcgatt
     7021 cacacttttt tacagcaaaa cgccaatcgg gaaggcgatt gcctgaccat ccccgacagc
     7081 agcgccacgc agcgtgtttc tgcttcgcca gcgaccacgg gggcgcgaac gatgaccgcc
     7141 tggacgcagg atctcatcta tgcaggcgat ccggttcatt atcatggcag tcgagctacc
     7201 gaagggacac tttcctggcg gcaagccacg gcccaggcgg ggcagggaga gcgttacgac
     7261 cagatactcg cgtttgctta tcccgacaac agccttagcc gctggggagc gccacgctca
     7321 acctgccagt tattacccaa agcgaaagcc tggctggcga aaaaaatgcc gcagtggcgg
     7381 cgtatattac aaggcgagac ggggtacaac gaaccagacg tgtttgcggt ctgtcgttta
     7441 gtctcaggtt tcccctatac cgatcggcag cagaaacggc tgtttattcg taacttcttt
     7501 acgcttcagg atcggctgga tttaacccat gagtatctgc acctggcctt tgatggttat
     7561 cccaccgggc ttgatgagaa ctatatcgaa acgctgaccc gacaattatt aatggactaa
     7621 tgctatgcga aagatttttc ttccgttgtt actggtggca ctttcgcctg tcgctcacag
     7681 tgaaggtgtg caggaagtcg agattgacgc accgctctct ggctggcatc cggcagaggg
     7741 cgaagatgcc agtttttcac aatcgatcaa ttacccggcg tcgtccgtca acatggcaga
     7801 tgatcaaaat atctcagcgc agatccgcgg caaaataaag aattatgctg cggcgggtaa
     7861 aattcagcag ggccggctgg tggtcaacgg tgccagtatg ccgcagagag ttgaatccga
     7921 tggttcattt gcacgccctt atattttcac tgaaggcagc aacagcgtgc aggtcatcag
     7981 cccggatggg caaagccgac aaaaaatgca gttttactca acgccgggta caggaacgat
     8041 tcgtgcacgt ttacggctgg ttctctcgtg ggatacggac aataccgatc tcgatctcca
     8101 tgttgtcacg cccgatggcg aacacgcctg gtacggtaac accgtgctga aaaacagtgg
     8161 tgcactggat atggatgtca cgacggggta cggacccgag attttcgcca tgccagcgcc
     8221 agttcacgga cgctatcagg tg
//
LOCUS       DADKRT010000183         8147 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.186, whole genome shotgun sequence.
ACCESSION   DADKRT010000183 DADKRT010000000
VERSION     DADKRT010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8147
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.186"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            67..261
                     /locus_tag="JQ356_003552"
     CDS             67..261
                     /locus_tag="JQ356_003552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose carrier protein"
                     /protein_id="HAY4623525.1"
                     /translation="MQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRK
                     VPPEPVHADIPVGAVSDVKA"
     gene            complement(400..1029)
                     /locus_tag="JQ356_003553"
     CDS             complement(400..1029)
                     /locus_tag="JQ356_003553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HAY4623526.1"
                     /translation="MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIV
                     VPLLLATARRYPLTPLLYTLIFLHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDK
                     LGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQ
                     GADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG"
     gene            complement(1152..2798)
                     /locus_tag="JQ356_003554"
     CDS             complement(1152..2798)
                     /locus_tag="JQ356_003554"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HAY4623527.1"
                     /translation="MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEP
                     EALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVL
                     PTCQDTGIAIIVGKKGQRVWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQEL
                     LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
                     IEKLEHNPGQYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
                     RDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
                     LQSHGGSMIMLAKGNRSQQVTDTCHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK"
     gene            complement(2876..4216)
                     /locus_tag="JQ356_003555"
     CDS             complement(2876..4216)
                     /locus_tag="JQ356_003555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HAY4623528.1"
                     /translation="MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
                     GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
                     LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
                     NVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREY
                     VYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMF
                     MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
                     EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
                     PTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
     gene            complement(4787..5506)
                     /gene="dcuR"
                     /locus_tag="JQ356_003556"
     CDS             complement(4787..5506)
                     /gene="dcuR"
                     /locus_tag="JQ356_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DcuR"
                     /protein_id="HAY4623529.1"
                     /translation="MSNVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIF
                     NSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVD
                     YLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLT
                     PQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
                     RPVYRYRIQAEHYSLLKQYCQ"
     gene            complement(5503..7134)
                     /gene="dcuS"
                     /locus_tag="JQ356_003557"
     CDS             complement(5503..7134)
                     /gene="dcuS"
                     /locus_tag="JQ356_003557"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DcuS"
                     /protein_id="HAY4623530.1"
                     /translation="MRHSLPYRMLLKRPMKLSTTVILMVSAVQFSVLLVVHLIYFSQI
                     SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTD
                     MQSLRYSHPEAQRIGQPFKGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQI
                     GVVVSGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEIS
                     TLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQV
                     VDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRL
                     DGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYSLKTANNYKEEIGSLLGKI
                     KSPVIAGFLISKINRATDLGHTLILNSESLLPDSGSEDQVATLITTLGNLIENALEAL
                     GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVK
                     QQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR"
     gene            7315..7545
                     /gene="yjdI"
                     /locus_tag="JQ356_003558"
     CDS             7315..7545
                     /gene="yjdI"
                     /locus_tag="JQ356_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S mono-cluster protein YjdI"
                     /protein_id="HAY4623531.1"
                     /translation="MDQALLDEGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLK
                     RKPWIMPDEVDVVTVVKVIDTCPSGALKYRHK"
     gene            7557..7829
                     /locus_tag="JQ356_003559"
     CDS             7557..7829
                     /locus_tag="JQ356_003559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY4623532.1"
                     /translation="MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESL
                     KGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS"
     gene            8056..>8147
                     /gene="ghoS"
                     /locus_tag="JQ356_003560"
     CDS             8056..>8147
                     /gene="ghoS"
                     /locus_tag="JQ356_003560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HAY4623533.1"
                     /translation="MEGKNKFNTYVVSFDYPSSYSSVFLRLRSL"
BASE COUNT         2024 a         1968 c         2084 g         2071 t
ORIGIN      
        1 gcggttgtgt tagggatgat tggctatgta ccgaatgttg aacagtctac gcaagcccta
       61 ttaggtatgc agtttattat gattgctcta ccaactctgt ttttcatggt aacgctgatt
      121 ctctacttcc gtttctatcg cctcaatggt gacacgctgc gcaggatcca gatccatctg
      181 ctggataaat atcgcaaagt accgcccgag cctgttcatg ctgatattcc ggtcggtgca
      241 gtgagtgatg tgaaagcctg acgtggacaa tagctaacga aaatggcctg atgcgatatg
      301 tttatcaggc cacgtcttaa tgtaatgctt tggatttgca aattttgtag accggataag
      361 gaattcacgc tgcatccggc atcaacaaag cgcacgttgt tatccggtta tcaagccaaa
      421 gcgccgtagc tggcggcaat gaaagcgagc gaggaatatc accgtcgtta atgcgccaag
      481 cagcgcgcag aacatatcgg attgcgtgtc ccactggtcg ccctgggtgc cgagaaaatc
      541 atccgctccc tgacccattg ccagcgccgc ccaccactcg attaattcat acattgcgct
      601 tatcgccagc gccacgcagc agactaggaa cgccaccatt ttacgtccgc gcacgtacat
      661 cccgcgaacg agaatttctc gtgccaccag tgcaggcacc agcccctgga aaaagtgccc
      721 cagcttgtca tacggattac ggctcaaccc cagccattcc tgcacctcaa aaccaacggg
      781 gactttcgcg taggtgtatt gtccgccgac catcaggatg atggcgtgaa ggaaaatgag
      841 cgtatagagc agcggcgtta acggataacg tctggcggtg gcaagcagta gcggcacgac
      901 aataatcacc ggtgtcactt ccatcagcca ggtgagtttg tcatgggccg aaatgccggt
      961 ataaatcagg attaatgtta gcgccagtgc gccggtgtta agaattaacg gcttgagtgt
     1021 gcgggtcatg gtgagttcgc aaatcaggga aaatactgac tattcaccag caagcgtgaa
     1081 attacaatcg caaaagaggt ggcccagggg gatcacctgg cagcatgctg ccaggcgctg
     1141 ggccgaagag gttacttagt gcagttcgcg cactgtttgt tgacgatttg ctggaagaag
     1201 tcgttacctt tgtcatcgac caagataaac gccgggaaat cttctacttc gattttccag
     1261 atagcttcca tacccagctc cggataagcg acgcattcca gatgcttgat gctctgctgc
     1321 gccagtaccg ccgccggacc gccgatgcta ccgaggtaga agccgccgtg tttatgacac
     1381 gtgtcggtaa cctgctgact gcggttacct ttcgccagca tgatcatgct gccgccgtgg
     1441 gattgcagca gatccacgta ggagtccata cggcctgcgg tggttgggcc aagtgaacct
     1501 gatggataac cggcaggggt tttcgccgga cccgcgtagt agatcgggtg atctttgatg
     1561 tactgcggaa gttctttacc ggcgtcaatc agctctttca gcttggcgtg tgcaatatct
     1621 cggcccacga taatggtgcc ggtgagcgac aaacgagtgg ataccgggta ttgcgaaagc
     1681 tgggcgagga tctctttcat cgggcggtta aggtcaactt tcaccgcttc gccttcaccg
     1741 gcctggcgca gttcttgtgg aatgtactgg cctgggttgt gttccagttt ttcgatccag
     1801 ataccttcgc ggttgatttt cgctttaatg ttacggtcag cggagcagga gacgcccatg
     1861 ccgaccgggc aggatgcgcc gtgacgtggc agacggataa cgcgaatgtc gtgcgcgaag
     1921 tatttaccgc caaactgcgc gccaagaccg agtttctggg cctcttccag cagttcctgt
     1981 tccagctgga catcgcggaa cgcctgacca tgttcgttcc cttccgtcgg cagttcatcg
     2041 taatagtgag cgcttgctaa cttgacggtt ttcaggttgg tttccgcaga cgtaccgcca
     2101 atcacaaacg cgatatggta cggcgggcag gctgcagtac cgagggtacg cattttctcg
     2161 acgaggaagt ttttcagttt gccgggagtc agcagggctt tggtttcctg gtagagatac
     2221 gttttgttgg cagagccgcc gcctttcgca acgcaaagga atttgtactc atcgccatct
     2281 accgcgtaca ggtcgatttg cgcaggcagg ttagtgccgg tgttgacctc tttgtacatg
     2341 tccagcgccg cattctgtga atagcgcagg ttatcttcga tataggtgtt atagacgcct
     2401 ttcgacagcg cttcttcatc accgccgccg gtccacacgc gctggccttt tttaccgacg
     2461 atgatcgcga tgccggtatc ctggcaggtc ggcagcacgc ctttggcggc gatttcggaa
     2521 tttcttaaga attgcagcgc cacgtacttg tcgttttcgc tggcttctgg atcgtgaaga
     2581 atagccgcaa cctgtttctg gtgtgccggg cggagcataa aagaagcgtc gtgaaaggct
     2641 tgctgcgcca gcagggtcag ggcttctggt tccactttca ggatggtttc gccgtcgaag
     2701 tcggcaacgc taacgtaatc ggaagtgagt agatagtatt cggtattgtc tttccccatc
     2761 gggaaaggtg cctggtagat aaagggtttg tttgacatag cttccagcct gtaactctgt
     2821 atttgttatt cgaaaatggc gtgccgcgta gtcacgggcg gcacgcaaag tgcatttata
     2881 agaacccgta catcgcggcg aagatccagc cgaagacgca cgatacgctc acaccaatca
     2941 accccggcag aataaagctg tggttgatga cgaagcgacc gatgtgggtg gtgccggaac
     3001 ggtcaaactg aatcgctgcc agatcgctcg gataagtcgg caggatgtaa taaccgtagc
     3061 aagccggtgc tgaagccacg atgtatgccg gatcaacgcc gatcgccaac gcgaccggaa
     3121 caatcgccgc cagcgccgca gcctgagagt ttacaaactt ggaaaccagc agcagaacaa
     3181 tggcataggc ccacggatac tctttcacca tttcacccag tacgccctga atttcagaca
     3241 tatgcgcacc gaacatggtt tctgccatcc atgcgatacc gtacaccgcc acgatggcga
     3301 tcataccgga acggaagact tcgttttttg agatagacgc gggattggtt ttggtcagga
     3361 taataatcag cgccccggtc agcagcataa acatctgaat aaccagtacc atcgacagcg
     3421 gtttgccgcc gaaggatgga cgcaggtccg aatcagcacc aagaagggcg actacagcga
     3481 ttgccccgag gaaaatccac attgccagcc agttgctttt cggcagtttt ttatccagca
     3541 gcgtcgcggt atcaccgtaa acatactcac ggttttccgg tacggagatg aatttctgga
     3601 actcttcgtc tttatccaga tctttaccac ggaaccagct gaagataccg atcgccagga
     3661 taccgattaa cgtcgatgga atggtgattg ccagcaggtc gaggaactca agatggcgac
     3721 catcaaaggt gacattaccc agcatcgcaa ccagagacac gaccgcaacc gacaccggac
     3781 tggcgataat ccccatctgt gcaccgatag aacttgccgc catcggacgt tccggacgga
     3841 tgttgttctt aatggcgacg tcgtagatga tcggcagaat ggtgtaaacc acatgacccg
     3901 taccgcaaag aatggtcagc gtacaggtca caaacggcgc gacaattgag acatatttcg
     3961 ggttgcggcg cagcaacttc tcggcaattt gcagcatgac atcaagaccg cccgaagctt
     4021 gcaaggtcgc cgatgccgcc accaccgcaa tgataaccag catgacatca accggtggtt
     4081 tacctggctg aaggtggaag acaaagacca gaatgaccag accgataccg cctaataaac
     4141 ccagcgcgat accacccttt ctggcaccat aaaacagaca tatcagtatt atgataagtt
     4201 ggatagtaaa taacatgtgt gaaccctcgc gataatccta tttaaatttt tgctgaatag
     4261 atcacagtca cgttctgttt tgtatgaact gttttcagag cctgactaaa tatccgtttg
     4321 gtcgttaccg gctttagcaa atacctcaca gtaaatattg gctgattaaa gcagcggcaa
     4381 atttatgcac tgtgataagc ggctttttca gagagaaaaa ctctctggcg atgggtttat
     4441 agtttgtact gcgcagatgt taatgttttg tttgctgtta tcttattgat atttatcggt
     4501 ctattttttg ttctcagggc agatatcatt aggtttaaag attaatctta tctacccatt
     4561 tgtgggtgaa aatacacata atgcgggtga cataatagtt aattaacttt tgttagcgtt
     4621 ttgaaattaa aaacaccgtt cacctgaaga gatattaatt tttagcgatg atggagggat
     4681 aattatattt gatctggcac aagttttact gatgaaggat gtaacttgtg ccaggggtat
     4741 tttgcattac ggtaataatt attacttaca gataaccagc gatccgttat tggcaatatt
     4801 gtttcagtag tgagtagtgt tctgcctgaa tacggtaacg gtaaaccgga cgccccgtga
     4861 cgccataatg gatactggtg aacaagatgt ggcagttgac cagccagatg aggtatttac
     4921 ggcaggaaac acgcgagatg ttaacctcgt tagccagctc gtcggttgaa aactcatagt
     4981 cctgatgcgc gtcaatccac tggcacagcg tgcgtaacgt ctgcggcgtt aagccttttg
     5041 gcaagcgacg aggatcctgt tcgttggagc tgctgccgtg gattagctga tcaagctcgg
     5101 cctggtcata atactgatgt ttttccagcg ccattttctt ttgccgccag ccggtgagcg
     5161 cctcttcaaa gcgggaagcc tggaagggtt tgatcaggta atccacgaca ccgtaatgca
     5221 gcgaatcttt aatggttgcc gcatcggctg cggaggagat gacaatcaca tcacttttgc
     5281 aacgcgcgtt atgcaggaca ggcagtaaat cgagcccgtt ctctttttgc atatagatat
     5341 cgagcaatat caggtcgata ggcgtatcgc tattgaagat aatctctttg gctttctcca
     5401 gcgtcgaggc tgttccacag cattgaaagc ctgggatttg tgctacgtat cggcgattca
     5461 gctccgcgac cattgcgtcg tcatcgataa ttaatacatt gctcatctgt ttgacctctc
     5521 cccgtcccag ggtatctgga caaaaaattg tgtgaaaatc ccgggttccg attccacggc
     5581 gatgctgccg ccgagatttt ctacctgttg tttgacaagt gctaaaccga cgcctcgctc
     5641 gcttcctttt gtcgagacac ctttgtcaaa aatgtgatcg attttgtcgg gtgcgatccc
     5701 cggtccatca tcgttaactt cgcagtgcag ccagccgtga cggtagtgca atgttacgct
     5761 aatttcgcca ccgggttccg gccctaatgc ttccagcgcg ttttctatca gatttcccaa
     5821 tgtggtaatc agcgtcgcga cctggtcctc actgccgctg tctggcagca ggctttcact
     5881 gtttaaaatc agcgtatggc ctaaatcggt cgcgcggtta atcttgctga ttaaaaaacc
     5941 agcgataacc ggagatttga tcttacccag cagagagcca atctcttcct tatagttatt
     6001 ggctgttttg agactgtaat cttccaactg cttataactc ttcagatgca ataatccgag
     6061 aatcacatgc aatttattca taaattcgtg ggatcgttca cgaagtgcat cagcatagtt
     6121 gaccagaccg tcgagtcgct gcatcagttt acgaacttca gttttgtccc tgaaggttga
     6181 aatggcaccg atgataacgc cattactgcg caccggaacg gtgttgatca gtaatagccg
     6241 gtctttaatc gtaatctctt cgtcgcggcg cggcgtaccg tcgcgtaaca cttccgagac
     6301 atctaccacc tgtgaccatg agtggcttag cgtcgacagt ttctcatcgt cctgcgactt
     6361 acggtaattc agcaattctt gtgcggcatc gttgatcagc gtgacctcgc cgcgatcgtc
     6421 cacggcaacg acgccttctt tgatagactg caacatggcc tggcgctgct caaacagcgt
     6481 ggagatttcg tagggttcca ggccgaaaag gatttttttc agtaccttaa ccagaatgca
     6541 ggtgccaatc agtccgacca gcatgccaaa taataccgac cagataatgc tccagcgact
     6601 gtcattgatt tgttgggtca cgcggcttaa ctcaaggccg ctcaccacca cgccaatttg
     6661 tttatgattt tcatcgtaga tgggggtaaa tacgcgtaaa gcctgcgcca gaaaaccgcg
     6721 attgatagcg acattttctt tgccattcag cgctttaagg atgtcatcac ctttaaatgg
     6781 ctgaccaata cgctgggctt caggatgcga gtagcgaaga ctttgcatat ccgtaacgac
     6841 aataaacagc agatcgttgc gtttgcgcac ggcttccgcg atggcctgga ttccgctctc
     6901 ctgcggtttt ttctgcaagc cctgacggat ttccggcgag tcggcgaggg tacgcgccac
     6961 tgccagtgcc ttgttggcca gcccgtctcg tgtcatatca ctgatttgcg agaagtaaat
     7021 cagatgcacc accaatagca ccgagaactg taccgcgctg accattaaga tcactgtggt
     7081 actcaatttc atcggacgtt tgagtaacat gcggtagggc aatgaatgtc tcatcagctt
     7141 ccttgtgtga caaatttctt aagcattatc tctgatgagg cgggtaattc aaagggagta
     7201 agaatgattg gctatatagg ggaagagact ctggcaacgg aaactgccag tgctgtatga
     7261 agattccagg gctatgctta tagcgataat catactgatg agagagggaa agtcatggat
     7321 caggcgctac tggacgaggg ttatcgctgt tataccggcg aaaagatcga tgtctatttc
     7381 aacactgcga tatgtcagca ttctggcaat tgcgtacgtg gcaacggcaa gttatttaat
     7441 ctcaaacgaa agccgtggat catgccggat gaagtcgacg tcgtcactgt ggttaaagtg
     7501 attgatacgt gcccgagcgg cgcgctgaaa taccgtcata aataagcgag ggtaaaatgg
     7561 aaatacgcga aggccacaat aaattttaca ttaatgacga acagggcaag caaatcgctg
     7621 aaattgtctt tgtgccgacc ggagagaatt tagcgattat cgaacatacc gatgtcgatg
     7681 aaagcctgaa agggcagggg attggtaaac agctggttgc gaaagtcgtg gaaaaaatgc
     7741 gtcgggaaaa acgaaaaatt atcccactat gcccatttgc gaaacacgaa tttgataaaa
     7801 cgcgggagta tgatgatatt cgcagttgat gggagagtac agagtcacga tatttttcat
     7861 gctctccgcg gagtgatgca ggagagcatc tgaagggtag ggggatgcac aaagaatggg
     7921 cagagagcgc gtttttttgt cccaagtcat cccctttact gagcaaaaaa aagaatatct
     7981 cctatatgag aatcatcaat cggggttaat aagttttgcg tccccagagc attcaatatt
     8041 gataggagtc atattatgga aggtaaaaac aagttcaata cttatgttgt ttcttttgat
     8101 tatccatcat cttattcctc agtgttctta aggttaagat cattgat
//
LOCUS       DADKRT010000184         8108 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.187, whole genome shotgun sequence.
ACCESSION   DADKRT010000184 DADKRT010000000
VERSION     DADKRT010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8108
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.187"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(119..195)
                     /locus_tag="JQ356_003561"
     tRNA            complement(119..195)
                     /locus_tag="JQ356_003561"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(159..161),aa:Asp,seq:gtc)
     gene            complement(328..1059)
                     /gene="dnaQ"
                     /locus_tag="JQ356_003562"
     CDS             complement(328..1059)
                     /gene="dnaQ"
                     /locus_tag="JQ356_003562"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HAY4623534.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
                     DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
                     DEELAAHEARLDLVEKKGGSCLWRA"
     gene            1124..1591
                     /gene="rnhA"
                     /locus_tag="JQ356_003563"
     CDS             1124..1591
                     /gene="rnhA"
                     /locus_tag="JQ356_003563"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HAY4623535.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN
                     NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD
                     LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV"
     gene            complement(1588..2310)
                     /locus_tag="JQ356_003564"
     CDS             complement(1588..2310)
                     /locus_tag="JQ356_003564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308236.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HAY4623536.1"
                     /translation="MKPARVPQTVVAPDRWGDLPWGELYRKALERQLNPWFTKMYGFH
                     LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLRETDRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQL
                     DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ
                     SKNKPRIRQAVGATRQCRKPQA"
     gene            2344..3099
                     /gene="gloB"
                     /locus_tag="JQ356_003565"
     CDS             2344..3099
                     /gene="gloB"
                     /locus_tag="JQ356_003565"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HAY4623537.1"
                     /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW
                     QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
                     SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTL
                     VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR
                     TEDIDLINVINEETLLQQPEERFAWLRSKKDRF"
     gene            3171..4529
                     /gene="mltD"
                     /locus_tag="JQ356_003566"
     CDS             3171..4529
                     /gene="mltD"
                     /locus_tag="JQ356_003566"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HAY4623538.1"
                     /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
                     RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
                     YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
                     DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
                     WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
                     MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRDSLASGEIAAVQSTLVAD
                     NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR
                     LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP
                     DS"
     gene            complement(4578..5201)
                     /locus_tag="JQ356_003567"
     CDS             complement(4578..5201)
                     /locus_tag="JQ356_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HAY4623539.1"
                     /translation="MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKN
                     ITTRQGYAASLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP
                     GHPVRDIWLQAVEALRDTSHVRNYASGAWLTLINEANLIVDNLITDKLPLEFSSWVVR
                     MRTPEALVDAIRIYQQSASTEVRTYFSLQTDGSFTSDIIMVEAHKAA"
     gene            complement(5205..6005)
                     /locus_tag="JQ356_003568"
     CDS             complement(5205..6005)
                     /locus_tag="JQ356_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HAY4623540.1"
                     /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI
                     RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
     gene            6245..7159
                     /locus_tag="JQ356_003569"
     CDS             6245..7159
                     /locus_tag="JQ356_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4623541.1"
                     /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP
                     VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF
                     NSYRKIIASPDYISRYGKPETIDDLKQHVCLGFTEPASLNTWPIACSDGQLHEVKYGL
                     SSNSGETLKQLCLSGNGIACLSDYMIDREIARGELVELMADKVLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEHVKTAPGGAVREA"
     gene            complement(7156..7923)
                     /gene="dkgB"
                     /locus_tag="JQ356_003570"
     CDS             complement(7156..7923)
                     /gene="dkgB"
                     /locus_tag="JQ356_003570"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HAY4623542.1"
                     /translation="MKDYVVISSVKTALELGYRAIDTAQIYDNEAAVGQAIAESGVPR
                     HELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEGVMQAL
                     LEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHG
                     IHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLES
                     NLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD"
BASE COUNT         2172 a         1948 c         1962 g         2026 t
ORIGIN      
        1 attaacacat ttacagcata acaaaaccat agaccgaaga aatagcggga tttaaatgca
       61 aaaaaaccgc aaaattaaaa atcttgcggt tctctgaact cattttcatg agtgaatttg
      121 gcggaacgga cgggactcga acccgcgacc ccctgcgtga caggcaggta ttctaaccga
      181 ctgaactacc gctccgcgtt gtgttccgtt gggaacgagg cgaatattac ggattgcctc
      241 acccttcgtc aacggttttt ctcatctttt gaatcgtttg ctgcaaaaat cgcccaagcc
      301 gctattttta gcgcctttta caggtattta tgcccgccag aggcagcttc cgcccttctt
      361 ctccaccaga tcaagacggg cttcatgagc tgcaagctct tcatctgtcg caaaaacaac
      421 gcgtaactta cttgcctgac gtacaatgcg ctgaattgtt gcttcacctt gttgctgctg
      481 tgtctctcct tccatcgcaa aagccatcga cgtttgacca ccggtcatcg ccagataaac
      541 ttccgcaagg atctgtgcat cgagtaatgc cccgtgtagc gttcgtttac tgttatctat
      601 ttcgtagcgg gcacataacg catcgaggct gttgcgctta ccaggaaaca ttttcctcgc
      661 caccgcaagg ctatcggtga ccttacagaa ggtattggtc ttcggaatat cgcgcttaag
      721 caacgaaaac tcgtagtcca taaagccgat atcgaacgct gcgttatgga tcaccaactc
      781 cgcgccgcgg atatagtcca tgaactcatc ggctacttcg gcaaacgtgg gcttatcgag
      841 caaaaattca tcggcaatac catgtacgcc aaaggcttcc ggatccacca gccgatcggg
      901 tttgagataa acatggaagt tattgcccgt caggcgacgg ttcaccactt caacggcacc
      961 aatctcaatg atcttgtggc cttcatagtg cgcaccaatc tggttcatac cggtggtttc
     1021 ggtatcgaga acgatctggc gtgtaattgc agtgctcata gcggtcattt atgtcagact
     1081 tatcgtttta cagttcgatt caattacagg aagtctacca gagatgctta aacaggtaga
     1141 aattttcacc gatggttcgt gtctgggcaa tccaggacct gggggttacg gcgctatttt
     1201 acgctatcgc ggacgcgaga aaacctttag cgcaggctac acccgcacca ccaacaaccg
     1261 tatggagttg atggccgcta ttgtcgcgct ggaggcgtta aaagaacatt gcgaagtcat
     1321 tttgagtacc gacagccagt atgtccgcca gggtatcacc cagtggatcc ataactggaa
     1381 aaaacgtggc tggaaaaccg cagacaaaaa accagtaaaa aatgtcgatc tctggcaacg
     1441 tcttgatgct gccctagggc aacatcaaat caaatgggaa tgggttaaag gccatgccgg
     1501 acacccggaa aacgaacgct gtgatgaact ggctcgtgct gcggcaatga atcccacact
     1561 ggaagatacg ggctaccaag tcgaagttta agcttgtggt ttacgacatt gccgggtggc
     1621 tccaaccgct tggcgaattc gtggcttgtt tttactctgt ttcatcgggt ttagcgttaa
     1681 aggaatagtc cgtttccggg caacaataag ttgtaagcaa ccaagcgcag gaatatgcgc
     1741 attcaatagt tttcctccgt gtttgttcca cgggagaacg tggaaacggc tggcgtgcag
     1801 cacttcaaaa ttcaacaaag agagccagtc cagttgccgc atcagagtaa acatccggct
     1861 gttatagggc gaggtttttc gcaataccgg cacaagtttg cgtaatccca ttaaactaat
     1921 gggattgaag ccactaatca ccagccagcc atcatcaatc aatacccgat cggtttcacg
     1981 caataaacga tgcggatcgg tgcaccacgg caatgtatgt gccagtagac aaacatcaac
     2041 ggatttatcg gcaaaaggaa gatgaagtgg atccgcctgc acctggacgg gcattccttg
     2101 cgcagaaaca ttcacttgat gagaaaccgc gcacgcttcg caattgattt ctgcgcttaa
     2161 attgccaatc ttaagcagat gaaaaccata cattttagtg aaccatgggt tgagctggcg
     2221 ctccagcgcc ttgcgataaa gctctcccca gggcaaatcg ccccagcgat caggagccac
     2281 gacagtttga gggactcttg ccggtttcat cacaaccttc cgtttcacac taagaggtaa
     2341 tctatgaatc ttaacagtat tcccgccttt gatgacaatt acatctgggt tttgaatgat
     2401 gaagcaggtc gctgcctgat tgtcgatccc ggagacgcag agccagtatt aaacgccatt
     2461 gccgccaata actggcaacc ggaggccata tttctcaccc accatcatca cgatcacgtt
     2521 ggcggcgtaa aagaactggt ggaaaagttt ccgcaaattg tggtgtatgg tccacaagag
     2581 acacaagata agggaacaac acaggtagtc aaagatggcg aaactgcctt cgttttgggg
     2641 catgaattta gtgtaattgc cacaccgggt cacactttag gacatatctg ttacttcagt
     2701 aaaccttatc tattttgcgg cgacacgctg ttttctggtg ggtgtggtag gttgtttgaa
     2761 gggacagcat cacaaatgta tcaatcactt aataagttaa gtgcgttacc tgacgataca
     2821 ttggtatgtt gtgctcatga atatacgtta tcaaatatga agtttgcttt gagtattctt
     2881 ccgcacgatt tgtccataaa tgattattat cgtaaagtta aggagttacg ggcaaaaaat
     2941 caaataacac tacccgtaat tctgaaaaat gagcggcaaa ttaatgtttt tttaagaacg
     3001 gaagatattg atttaattaa tgtaattaat gaagaaacat tattgcaaca acctgaagag
     3061 cgttttgcat ggttaaggtc aaagaaagat aggttctgat aaaactttct tgtcatcggc
     3121 tccgttcgcc gttatgatcg gtcgtctttt aagcaactat tgacacacac atgaaggcaa
     3181 aagcgatatt actcgcctct gtcctgctcg tgggttgcca gagtaccggc aacgttcaac
     3241 agcacgcaca gagcctttct gcagctggtc aaggggaagc agcaaagttt acaagtcagg
     3301 cacgatggat ggacgatggg acgtctatcg cgccagatgg tgacttgtgg gctttcattg
     3361 gcgacgagct aaagatggga attccggaaa atgaccggat tcgcgaacag aaacagaaat
     3421 atttacgcaa taagagctat ctccacgatg taactttacg ggcagagccg tatatgtact
     3481 ggatagcagg gcaagttaaa aaacgtaaca tgcctatgga actggtacta ctacccatag
     3541 tggagagcgc ttttgatcct cacgcaacgt ctggcgccaa tgccgcaggc atctggcaga
     3601 tcattccgag cacggggcgc aattatggtt tgaaacagac ccgcaattat gacgcgcgtc
     3661 gcgatgttgt tgcttcaaca actgccgcgc tgaacatgat gcagcgtctg aacaagatgt
     3721 ttgacggcga ctggcttctg accgtagcgg cttataacag cggcgaaggt cgggtcatga
     3781 aggcaattaa aacgaacaaa gcgcgtggga aatccacgga cttctggtcg ttaccgttgc
     3841 cgcaggaaac gaagcagtac gtgcctaaaa tgctggcatt gagtgatatt ctcaaaaaca
     3901 gcaagcgtta tggcgtacgt ctgccaacga ccgatgaaag ccgtgctctg gcgcgtgtgc
     3961 acctgagcag cccggttgaa atggcgaagg ttgcagatat ggcggggatt tccgtcagca
     4021 agctgaagac attcaacgct ggcgtaaaag gctccacgct gggcgcaagt ggcccgcagt
     4081 acgtgatggt gccaaagaag catgcagatc aactgcgtga ttctctcgct tcaggcgaaa
     4141 ttgctgctgt acagtcgacg ctggttgccg acaatacgcc gcttaacagc cgtgtttaca
     4201 ccgtacgctc tggcgacacg ctttcaagca tcgcttcacg tctcggcgta agcaccaaag
     4261 atttgcagca gtggaacaaa ctgcgcggat ctaagctgaa gccaggccaa agtttgacga
     4321 ttggtgcagg cagtagcgca cagcggttgg caaacaacag cgatagcatt acgtatcgtg
     4381 tgcgcaaagg cgattcgctt tcaagcattg ctaaacgcca cggcgtgaac atcaaagatg
     4441 tgatgcgctg gaacagtgac actgcgaatc tgcaaccagg cgataagctg acgttgtttg
     4501 tgaaaaacaa caacatgcca gattcctgac aaaccagata ataaaaaagg caccgattcc
     4561 cccggtgcct tttttattta tgccgcttta tgcgcttcta ccatgatgat atcactggtg
     4621 aaagagccat cagtctgcaa ggaaaaatac gttctcacct ctgtcgatgc gctctgttgg
     4681 taaatgcgaa tagcgtctac taacgcttct ggcgtacgca ttctcacgac ccatgaagaa
     4741 aattccagcg gtaacttatc tgtaattaaa ttatcaacta tcagattggc ttcattgatt
     4801 aacgtcaacc acgcaccgct ggcgtagttt cgtacgtgag aggtatcgcg taatgcttct
     4861 accgcctgta accagatgtc gcgcactggg tgacccggag acattacatc catcacaatc
     4921 agcctaccgc caggtttcaa tatcctattc acttctcgca gtgctgcacc aacatcatgc
     4981 cagtgatggg cagaataacg gctgataaca atatcaaatg cgttatcggc aaatggcaga
     5041 cttgcggcat atccctggcg ggtggtgata tttttcagtt gccgggcttc ggcagcttgt
     5101 gccacaacat ccagcatgtg ggccgataag tcatacgcca ccaccgcgct cacgttttgc
     5161 gcagcgccaa acgttggtct gccctgtggc agacctgaca taccttattt atcaggcttg
     5221 ccgggactga attcaacgag tagcggattg tgatcggaag cgcgcgtaac cagtacagaa
     5281 gcttcactga cgttcagacc acggtagaaa acaaaatcga gcgggcgacc aaacgcccga
     5341 cggcgctgat catcggtaaa acgcacctgg cgcagcgaca tttcccgcgc aaagcgatat
     5401 aacgcgttca tccttctacg gctccaggca ttgaaatctc ccgccataat gaccgggccg
     5461 ctgtggtgag ctatctgatc accaatagga agtaactgct tactatagac atccacgccc
     5521 agactgaagt tgacggcgtg tatattaacc accatcaaca ggcgggtgtc aggtaatgga
     5581 tagaccgtca ccagtgccga cttcgccaga cgcaaaatgg gttctcgttc acgtaacggg
     5641 cagcaataca ctggatgtgc cgccgaaagg gtcattacgc cagaaggatg ttgtggcagc
     5701 acgaaagcgg gtacctgatc ggcggcaaga tagttagcgg tcgcaaactg tactaactct
     5761 ggcgttgtct gcgcttcctg caataacacc aggtgtgcat ctttgccgta gttctttaat
     5821 accgacaacc attcagcgcg ttgctgtttg tatatgttcc acaccaggat ccgaatacgc
     5881 tcttcggtac ttaacggttc cccaggtggt aatgcctggc cgatgctcgc aaaagacccc
     5941 ggcggtaaga tcctttccgc aggttgtccg gcaacatagc gcatggcata ggtgtttttt
     6001 cgcacttttg actttgaaac ctctattacg tcaacccttc cgcactcggg agggttctac
     6061 tattataggg attttagctc actctttcaa cgagcaattg tatattgtta tgtaagcaag
     6121 tgcttacacc ggtcagaatt ttgctcatta tggagaacat taaatcgcat gacatatcac
     6181 gcatcctgat ggtttaatga caaataaatt caaaatatct cttctatttt gcaacagggc
     6241 aaaaatgaaa gccacgtcgg aagaactcgc catttttgtt tcggtcgtcg aaagcggcag
     6301 ctttagccgg gcagcggaac aattagggca agcaaactca gcggtaagcc gggcggtgaa
     6361 aaagctggag atgaaacttg gcgttagcct gcttaatcgg accacgcgac aacttagcct
     6421 gacggaagaa ggcgagcgtt attttcgtcg cgtacagtca attttgcagg agatggcagc
     6481 ggcagaatca gaaattatgg agacgcgtaa tacaccgcgt ggactgttac ggatcgatgc
     6541 cgcaactcca gtggtgctgc actttctgat gccgttaatt aagcctttcc gtgaacgcta
     6601 tccggaagtc actttgtcac tagtctcctc cgaaacgatt attaatttga tcgaaagaaa
     6661 agtggatgtc gcgatacgcg ctggtacgtt aacggattcc agcttacgtg ccaggccgtt
     6721 atttaacagt tatcgaaaaa ttatcgcctc ccccgattat atttcccgct acgggaagcc
     6781 agaaacgatc gacgatttaa agcaacatgt ttgcctggga ttcactgaac ccgcttccct
     6841 caatacctgg ccgatagcct gtagtgatgg acaattacat gaggtgaaat acggtttgtc
     6901 atccaatagt ggggaaacac tgaaacagct ttgcctgagt ggcaacggga ttgcgtgttt
     6961 gtccgactac atgatcgaca gagaaatcgc tcgcggagaa ttggtggagt taatggcaga
     7021 taaagtgttg ccagtggaaa tgccattcag tgccgtctat tacagcgacc gtgcggtaag
     7081 tacgcgcatc cgggctttta tcgatttcct tagcgagcat gtaaaaacag ctcccggagg
     7141 agctgtcaga gaggcttaat cccattcagg agccagacct tccgggctaa ccaggcggtc
     7201 gttgcaatcc agtgcggcga tcgctttttt atcttcggca tcaagctgta aattttgtgc
     7261 cttaagatta ctttccaggt ttttacgttt agtagaagaa ggaattactg agtaaccttc
     7321 ccccatagcc cacgccagaa tcacttgtgc cggagtcgca ttgtgtttag ctgcgatacg
     7381 agcaataacc tcatctttca gggccttacc atacgccagc gtcatatagg aagtaatatg
     7441 tatgccgtgc tgtttagccc aggcaaccac tttacggttt tgcagataag gagagagttc
     7501 aatctggtta gtagcgatgt tttcagcgcc aacagcagca atcgcctttt ccatcaatgg
     7561 gatcgtgaag ttggaaatac cgatctcacg cgtcagccct tgttttttgg cttccagcag
     7621 cgcctgcata accccttcaa cagagacttc atcgtttggt gacggccagt ggattagcgt
     7681 cagatcaaca taatcggtac gcaatttttg caggctctct ttcagacttg ggatcaattt
     7741 gtctttgctg agattttcaa tccagatttt agtggtgatg tagagttcat gacgtggcac
     7801 gccactttct gcaatcgcct gacctactgc ggcttcgtta tcatagattt gtgcggtatc
     7861 aattgcgcga taaccaagtt caagcgccgt tttcacagat gaaataacaa cgtagtcttt
     7921 caacctaaac caaatgcagg gatagccata atatgcctct tttaatgcta ttttcgttaa
     7981 ctgaggtgat tatgggcttc agactgttga ggaaaaaagc gtaaaatgca gaggattttt
     8041 gcgattctgg caataataga tatacagacg aaaaaaaacc tcgagcgtta actcgaggct
     8101 tcttaata
//
LOCUS       DADKRT010000185         7865 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.188, whole genome shotgun sequence.
ACCESSION   DADKRT010000185 DADKRT010000000
VERSION     DADKRT010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7865
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.188"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(497..859)
                     /locus_tag="JQ356_003571"
     CDS             complement(497..859)
                     /locus_tag="JQ356_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibL family ribosome-associated protein"
                     /protein_id="HAY4623543.1"
                     /translation="MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKAT
                     LEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTA
                     LGREMGLQEMTGFSKTAF"
     gene            1144..1353
                     /locus_tag="JQ356_003572"
     CDS             1144..1353
                     /locus_tag="JQ356_003572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623544.1"
                     /translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
                     ESVPLYLQRLEYYRRLYRPKQVEGQ"
     gene            complement(1365..1952)
                     /gene="mtlR"
                     /locus_tag="JQ356_003573"
     CDS             complement(1365..1952)
                     /gene="mtlR"
                     /locus_tag="JQ356_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor MtlR"
                     /protein_id="HAY4623545.1"
                     /translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
                     FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
                     NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
                     YAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
     gene            complement(1952..3100)
                     /gene="mtlD"
                     /locus_tag="JQ356_003574"
     CDS             complement(1952..3100)
                     /gene="mtlD"
                     /locus_tag="JQ356_003574"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709374.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY4623546.1"
                     /translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
                     SYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKG
                     LVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRI
                     VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPSMELTDNLMAFVERKLFTLNT
                     GHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
                     ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHF
                     RSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ"
     gene            complement(3330..5243)
                     /locus_tag="JQ356_003575"
     CDS             complement(3330..5243)
                     /locus_tag="JQ356_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HAY4623547.1"
                     /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLT
                     NETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
                     AGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKM
                     LAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIE
                     ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
                     GMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILL
                     KTSKVKEEDDIEAATRRMQDMKAESKGTSPLSAGDVTNDLSHVRKIIVACDAGMGSSA
                     MGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
                     NFLDSGLYTSLTERLVAAQRHTENEVKVKDSLKDSFDDSSANLFKLGAENIFLGRKAA
                     TKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKT
                     GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
                     SVDEVLELLAGRK"
     gene            5780..6142
                     /locus_tag="JQ356_003576"
     CDS             5780..6142
                     /locus_tag="JQ356_003576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HAY4623548.1"
                     /translation="MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAI
                     HTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRL
                     EHQLAAEKKTDYSTFPEI"
     gene            6145..7281
                     /locus_tag="JQ356_003577"
     CDS             6145..7281
                     /locus_tag="JQ356_003577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY4623549.1"
                     /translation="MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLI
                     LLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQAR
                     VDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFS
                     ERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLE
                     QTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGD
                     DAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGGLQSLTVVPGTDGVQGTIELDPND
                     DIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH"
BASE COUNT         1964 a         1909 c         1903 g         2089 t
ORIGIN      
        1 tgtccattgt attattggtg atttatgttg ctttacatta atgacagtga tgtgtgtcga
       61 ttaaatattg ttttaagcat tcatcataaa aatgtatcat tcgtttcaaa agatgtctgt
      121 gtttgtatga atatattatt ttcgtggatt ctaatgatga ttattaataa atgtcaaata
      181 tgaaagaaac catgtctggg aaaaaattta cagataattt attgtatgaa tatgatgatt
      241 aaaatttcac aattaaatcc gaaaaaaaga gacgtaactg cttgttaatt aataaatgat
      301 atcttctata tatttttatt gtttataggt ggctatttcg gtaaaaatgc attttcagaa
      361 tatcaaccag cggtaaatcg acgtaaaggg agtgaattgt ttggtaatta ggcgagtaga
      421 caggagagtc cccgcattga ccagctaagg caagccagat gcgggttgat atgatcgaac
      481 cagtcgtctg aggcgcttaa aacgcagtct tagagaatcc agtcatctcc tgcaggccca
      541 tttcacggcc cagcgcggtc attgggtgca caaccaccag tccgcgaaca cttttcttca
      601 gcttgcccat atcagcctgc tcttttttgg taattgcgcg ctgaaacggc atcttcatca
      661 gcttctgtgc ttctttactc agtttttggc tatgaacctc acgcaggcga gcaatttctg
      721 cttccagcgt ggctttctct ttttccagct cggcatattt gtctgcggct tcaaccagcg
      781 acagatcggc ctgctggtgg cggatggcgt ccaggcgatc gctgagacgt ttgatttcgt
      841 ttttttcgac ttctttcatg tgatggcttc tgataaagat aaatttatag cccctagtat
      901 gcgcgaccag gtgctttgtt cacaactgat gacattgtaa tagttctgca acgtaatcat
      961 taacatgctc aaaaactacg caattcgttg attaattaag aaatctatag aaaaaagata
     1021 ataaacagca gcggatgatt attgaggatt cagcacgttt tccttaatgt catctttacc
     1081 gggaacctaa actaaaattg gtggccgcgc attcccggcg cggggtaata cggagatatc
     1141 atcatgggca aattaggtga aaacgttccg cttcttatcg ataaagccgt agatttcatg
     1201 gcatcaagcc aggcgttccg ggagtatctg aaaaaacttc ctccccgtaa cgcgattccg
     1261 tccggaatac ccgatgaaag cgtgccgtta tatctacaac gtctggagta ttatcgtcgg
     1321 ctttatcggc cgaagcaggt agaggggcag taagcagacg ttgcttactt ttgaaaggct
     1381 ttttttaagc tgattttgga aatcagctca gtcagtgaaa ggaccattgt tgatcgcaca
     1441 gcctgttgat agcgctgaat ttgcattgca tacaaactgg agtctgctgg ttcaaactgt
     1501 ggcggcggtg gtaacgccgc cacgcagtgc agttcaccaa agggtccaag gatttcgtcg
     1561 tcggtaaagg cgtactcgtt gccgtcgtga tttagctctt cacgcaatgc catcagcagt
     1621 tccgcatctt cgtattcctg gcggttaatg acgcccaacc cgtaaatgag ttttaaacgc
     1681 acagaaagat cgcccagcgg accgtcgccg tcgagtaacg gttctacagc atacttcacc
     1741 gcgtaatcgt ctttgcggaa tacctgaagc accagaagat ttaccgcctc ggtcaaaagc
     1801 tcgacggcgg tgatcagaaa gcttcgcacg gttttgccag cattcagacg ctcaagcaca
     1861 cggttttcaa aggcctgggt ttgttccatt gttgcctgca tatctgacaa tctgttattc
     1921 gggcgcaggg tgtcctgcgc ctggtccacc attattgcat tgctttataa gcggttaccg
     1981 cctcggatac aacctcactg ttggcatcaa gaccggaaat ctgtgccagc gccgcctgcg
     2041 gacctttgtc agcgatcagt gctgccagtt cctgagcctg cggatcatct tcactgcgga
     2101 agtgcattgc accagcaatc ccctgaatca gattcttgtg cggaaggctg tattccagcg
     2161 taccgagcag tggcttgatc agacggtcgc cagcactcag tttacgcagc ggctgacggc
     2221 ctacgcgctc tacatcatct ttcagatacg ggttctcaaa acgaccgagg attttctgga
     2281 tgtacgccgc atgtttgtct gcgtcaaagc cgtagcgctt gatcagtacc gcaccacttt
     2341 cttccatcgc accttttacc accgcgcgga ttttctcgtc gagaatagcg tcacgaatgg
     2401 tctgatgacc ggccagtttt ccgaggtacg cggttatagc atgacccgtg ttcagggtga
     2461 agagtttacg ttcgacaaat gccatcaggt tgtcggttaa ctccatgctt gggatgttcg
     2521 gcagtgcgcc tttgaactgc gttttatcga caatccattc gctgaaagtt tctaccgtca
     2581 cttccagcgg atcgttagtt gccgaagccg aaggcggtac gatgcggtca acggcggaat
     2641 cgacaaagcc aacgtgttct tctacccacg ctttggcgtc ttccggcagg gcgttcatca
     2701 catggccttt cagctgcgtg gtaccgcgta ccatgttttc acaggcgatg atgttcagcg
     2761 gggattcatt accttgttct ttgcgtttca ccagcccttt ggcgatagcc ggagcaatac
     2821 gttccagcac aaccgggcca acggcggtag tgactaaatc gacctgagca atcagatcaa
     2881 cgacatcatc accaatgctg ctgacagcat tgacgccgga aacggtatct acctgctcgg
     2941 tttcaccaac cacatgaacc tgatagctat gacgggcatt cagggcatca agtaccacct
     3001 gattgacatc ggcaaacgtc agttggatac ccgcgtctgc cagcagttta ccgataaagc
     3061 cacgaccgat attacctgcg ccaaaatgta atgctttcat agtattaacc ttcatcaatg
     3121 tttttacccg agagggctgg ggtgaggctt ttccctcacc caaaccctct ccgtgaggag
     3181 aggggcagcg ccggatgcgg cgtaagcgcc ttatccggcc tacaagaacg tgcaaattca
     3241 acaaatcgtg atgcatcctg taggcctgat aagcgtagcg catcaggcaa ttaaccccac
     3301 cttctccatg tggagagggt gggattggat tacttacgac ctgccaacag ttccagcact
     3361 tcatccacgc tggtggtgtg tgccagacgc tcgatgacgg actcatcatc cagtgcattg
     3421 gtcaggctgg tgataacctg aatgtgctcg ttgttacggg ctgcaatacc aatcaccaga
     3481 cgggcaatgt catcttcctc ttcaccgaag cgcacgcctt ccgggtactg gcagaacacc
     3541 acgcccgttt tcagtacgcg atctttcgct tcaaccgtac cgtgtggcac cgcgatagac
     3601 tcacccagat aagtcggggt cagtttttca cgatccagca tcgcctgaac gtattccggc
     3661 tcaacgtaac cgcctttcac cagctgctcg ccagcaaaac gaatcgcttc ttctttggtt
     3721 gctgctttgc gaccgaggaa gatgttctcc gcgcccagtt tgaacaggtt agcactggaa
     3781 tcgtcaaagc tgtctttcag actgtctttc actttcactt cgttttcagt atggcgctgg
     3841 gcagcaacca gacgttcggt taggctggtg tacaggccgc tgtcgaggaa gttggtcagc
     3901 gaaatatgct gtgcctgcgg aacctggcgc atagcgcgtt cggtcaggtc acggtgagtg
     3961 atgacgaggt ccacatctgg cggcaggttg ttgatcgcgc tgttagtgac cgaaatctgc
     4021 gacagacctg catcctgaat tttcttacgc agcacgcctg cgcccatcgc acttgaaccc
     4081 ataccggcat cacaggcaac gatgatttta cgtacgtggc tcaggtcgtt agtcacatcg
     4141 cccgcagaca gcggagatgt gcctttagac tcagctttca tgtcctgcat acgacgagtt
     4201 gctgcttcaa tatcatcttc ttctttcact ttgctggttt tcagcaaaat agcagagaca
     4261 acgaaggaga cagccatcgc cgcacacaca cccgcgatgt tagcgaaata agcccctttt
     4321 ggtgtcatcg ccagtacagc aaggatagaa cccggagatg ccggagaaac cagaccaccg
     4381 cccaggatag tcagcgtgaa cacgccagtc ataccgccga ggatgactgc gaggatcaga
     4441 cgcggattca tcagcacata cgggaagtag atttcgtgga taccacccag gaagtggatg
     4501 attgccgcac cgcccgcaga ctgtttagcg ctaccacgac caaagaacat gtacgccagc
     4561 agcacgccca tacctggacc tgggttagct tcaatcagga agaagattga tttacccagt
     4621 tcatgggact gctgaatacc cagcggcgag aagataccgt ggttaatggc gttgttgagg
     4681 aacaggattt tcgccggctc aacaaagata gacgccagcg gcagcatgtc atggacaacc
     4741 atgaagttaa cgcccgcagc cagcattttg gacagggctt caacaatcgg gccaatgccg
     4801 aggaatgcca gaatagcgag gatcatcccg atgatgcctg cggagaagtt attcaccagc
     4861 atctcaaaac cggatttgat cttaccgtct acccagcggt cgaagtgctt aatgcaccag
     4921 ccgcccagcg gacctgcaat catagaaccg aggaacatcg gcatgtctgc gccgacgata
     4981 acgcccatgg tggtgatggc accgactacg ccgccacgtt cgccgcctac cagcttacca
     5041 ccggtataac cgatcagcag cggcaggaga taagtgatca tcggcccgac cagcttcgcc
     5101 agcgtctcgt tcgttaacca ccctgttgga ataaataacg cggtgatgat accccacgcg
     5161 ataaacgcgc cgatatttgg catcaccatg ttgctgagga aacgaccaaa gctttgcact
     5221 ttgatcttaa tatcggatga cataaaaaca ccccttctta tgtttgctgt cgcgcaggct
     5281 ggaagcccga ggttttttgt taatgtggcg gcagaggtag ccggaccttg tagatactgc
     5341 gaaatctggc actgaatcgg ttaactgtcc agtcgacggc cttttgtgtg atattaatca
     5401 cataaatata ggaggtagag aggtaattga cgtgacgttc atcacaaaac gcttgtgtaa
     5461 aaaagcaaca aggcggcgat tttcgctaaa aatggcattt aaatgtgagt agtgtcacat
     5521 ttttgttttg atggtttgtt gaatctttgt gatctgaatc acaagatatt ttcttacggc
     5581 gttcacctga tgtgatctac agcatgttat gccttcgtca tacaatcgtt atgtaactaa
     5641 gcaactcatc acctctaaaa attattcttt ggtgttatgg cgagaatcgc gaacccggat
     5701 tattgtcaaa atatcagcct gactcccttc tggctgccag cccaaaaaca acactgataa
     5761 acgtgaatcc gaggcagata tgtttctaaa ctatttcgcg ttgggagtgc tgatcttcgt
     5821 ctttctggtg attttttatg gaatcatcgc gatacatgac atcccttatc tgattgccaa
     5881 aaagcgcaat cacccccatg ccgacgctat tcatacggcg ggctgggtga gcctgtttac
     5941 tctgcatgtt atctggccgt ttctgtggat ctgggcgacg ctctatcaac cggagcgtgg
     6001 ctggggtatg cagtcacatg ttgcgtcgca ggagaaagcg actgacccgg aaatcgcctc
     6061 actttctgac cgaatttccc ggctggagca tcaactcgcc gccgagaaaa agactgacta
     6121 ttccacgttc ccggagatct aattatggat ctattgattg ttttaactta cgtggcgctg
     6181 gcgtgggcgg tctttaaaat cttccgcatt ccggtaaatc agtggacgct ggcgacggcg
     6241 gcgctgggag gcgtgtttct ggtgagtggt ttgattttgt tgatgaacta caaccaccct
     6301 tacactttta ccgcgcaaaa ggcagtgata gcgatcccta tcacgccaca ggtgacggga
     6361 attgttactg aagtcactga caagaataat cagcttattc aaaagggcga ggtgcttttt
     6421 aagctcgacc cggttcgtta ccaggcgcga gttgacagac ttcaggctga cctgatgacg
     6481 gcgacgcata atataaagac gctgcgtgcg cagctcactg aagcgcaggc caacaccacc
     6541 caggtttcag cggagcgcga ccgtctgttt aaaaattatc aacgttactt gaaaggcagc
     6601 caggcggcgg tgaatccgtt ctcggaacgt gacatcgacg atgcgcggca aaatttcctc
     6661 gcgcaggatg cgctggtgaa aggctcggtg gcggagcagg cgcagatcca gagccagctc
     6721 gacagtatgg ttaacggcga gcaatcgcag attgtgagct taagagcgca acttactgaa
     6781 gcaaaatata accttgagca gactgtcatt cgcgcgccga gcaatggcta cgttactcag
     6841 gtactgatcc gcccaggtac atacgcagct gccttgccgc tgcgtccggt gatggtcttc
     6901 atccccgagc aaaaacggca aattgtcgcc caatttcggc aaaactcgct gttacgtctg
     6961 aaacccggcg atgatgcgga agtggtgttt aacgcgctac ctgggcaggt gtttcacggc
     7021 aaactgacta gtattttacc tgtcgtgcca ggcggttctt atcaggcgca ggggggattg
     7081 caatcattaa cggtcgtgcc cggcacggac ggtgtgcagg gaaccattga actggaccct
     7141 aacgatgata tcgatgcctt acccgacggc atctacgccc aggtggcggt ttactccgac
     7201 catttcagcc atgtttcggt gatgcggaaa gtgctgctaa gaatgaccag ctggatgcat
     7261 tatctttatt tggatcattg agggggaggg gggagattat ggaactttgc tccttgtaag
     7321 gactaattat ttttgcatat tacttcatta gctgcgatga tttttcttta atattcatta
     7381 tgttaataag ttctggatga gtgtgctctc attggatttt ttatccgtct tgttctgccg
     7441 caggatgaga ctatacatcg tcgagatcgc aatgatgata tgagttgttc ctcctgcgac
     7501 ggctctaatc aaaaaagagc aggagtgctt ttccatctat tgcgatgatg gctttattat
     7561 ctgaaggatg acagtcacat ttaaaaaata tttaatctat agatcacaat gtagggtcat
     7621 ggaatatatg tatacaacta ttttcttctt cacttttaat tatcgtattc attataaaac
     7681 taagttaaaa aaactcctgg agagtgagtt attaatatat ttttaaataa aattaagtta
     7741 tcattcatcg atgcatttta tagaatcatc aatggccata atagtactat taactctcaa
     7801 ttttatattt ttatcatcac tacaaatatt aactgaattt atatcaatga tttttttatt
     7861 cttat
//
LOCUS       DADKRT010000186         7820 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.189, whole genome shotgun sequence.
ACCESSION   DADKRT010000186 DADKRT010000000
VERSION     DADKRT010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7820
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.189"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            270..413
                     /locus_tag="JQ356_003578"
     CDS             270..413
                     /locus_tag="JQ356_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HAY4623550.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
                     KTI"
     gene            426..635
                     /gene="cspE"
                     /locus_tag="JQ356_003579"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             426..635
                     /gene="cspE"
                     /locus_tag="JQ356_003579"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY4623551.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            801..1610
                     /gene="rlmA"
                     /locus_tag="JQ356_003580"
     CDS             801..1610
                     /gene="rlmA"
                     /locus_tag="JQ356_003580"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HAY4623552.1"
                     /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA
                     FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK
                     AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY
                     PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
     gene            complement(1607..2173)
                     /gene="mntP"
                     /locus_tag="JQ356_003581"
     CDS             complement(1607..2173)
                     /gene="mntP"
                     /locus_tag="JQ356_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HAY4623553.1"
                     /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR
                     HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
                     IIGKKAEILGGLVLIGIGVQILWTHFHG"
     gene            complement(2601..3059)
                     /locus_tag="JQ356_003582"
     CDS             complement(2601..3059)
                     /locus_tag="JQ356_003582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HAY4623554.1"
                     /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR
                     IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA
                     NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDNLERIYKLIVLTQ"
     gene            complement(3114..3965)
                     /locus_tag="JQ356_003583"
     CDS             complement(3114..3965)
                     /locus_tag="JQ356_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020804907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HAY4623555.1"
                     /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSR
                     ITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     ACGLLGL"
     gene            complement(3978..4778)
                     /locus_tag="JQ356_003584"
     CDS             complement(3978..4778)
                     /locus_tag="JQ356_003584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY4623556.1"
                     /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
                     SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
     gene            complement(4841..5812)
                     /gene="manX"
                     /locus_tag="JQ356_003585"
     CDS             complement(4841..5812)
                     /gene="manX"
                     /locus_tag="JQ356_003585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HAY4623557.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
                     MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
                     YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
                     HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
                     VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
     gene            6275..>7820
                     /gene="yoaE"
                     /locus_tag="JQ356_003586"
     CDS             6275..>7820
                     /gene="yoaE"
                     /locus_tag="JQ356_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HAY4623558.1"
                     /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
                     TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDVDNPMPIPE
                     GAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPV
                     CRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS
                     FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQA
                     LDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKE
                     QPAHDED"
BASE COUNT         1988 a         1914 c         1940 g         1978 t
ORIGIN      
        1 acgcactatg taataacttc tcccactggc ctggaacaac tgaacttatt gaactatgtt
       61 agaaaatacg ccagtttaag tatctgcctg aactggcaag gttaagcaca atgatatatc
      121 ggcgcgtatt ccgttgcata agtgtgcaaa aaaagtggaa gacgtatcga gatttgtgcg
      181 tctgatcgag acatgtttaa aaatggcttg ccataattaa cgttgtatgt gataacagat
      241 ttcgggttaa acgaggtaca gttctgttta tgtgtggcat tttcagtaaa gaagtcctga
      301 gtaaacacgt tgatgttgaa taccgcttct ctgccgagcc ttatattggt gcctcatgca
      361 gtaatgtgtc agttttatct atgttatgcc tgcgggcgaa gaaaacaatc taaggaattt
      421 ttcaaatggc aaagattaaa ggtcaggtta agtggttcaa cgagtctaaa ggttttggct
      481 tcattactcc ggctgatggc agcaaagacg tgttcgtaca cttctccgct atccagggta
      541 atggcttcaa aactctggct gaaggtcaga acgttgagtt cgaaattcag gacggccaga
      601 aaggtccggc agctgttaac gtaacagcta tctgatcgaa tccactgatc tgaagtgtga
      661 atacgcttca atctcgctat aaagcctcgt cgaatgcgag gctttttact atgctttatc
      721 ttcgctcctg gcgttcggat atttgcccgc cgcgtgattc gcgttacact tgcggccttt
      781 agtatcctgc cggagttgtc atgtcttttt cctgtccact ttgccatcag cctctttcgc
      841 gtgaaaaaaa cagctatatc tgtccccagc gacatcagtt tgatatggcg aaagaagggt
      901 atgtcaatct gctgcccgtt cagcataaac ggtctcgtga tccgggcgac agcgcggaaa
      961 tgatgcaagc acgccgcgca ttcttagatg ccggacatta tcagccgctg cgtgatgcaa
     1021 ttgtcgccca actgagggaa cggcttgatg ataaggccac ggcggtgctg gatattggct
     1081 gtggtgaagg gtattacaca cacgcatttg ccgatgcgtt gcccgaaatc accacgtttg
     1141 gtctggatgt ttcgaaggta gcgataaaag cggcggcgaa acgctatccg caggtcactt
     1201 tttgtgtcgc ttccagccac cgtttgccgt tttccgatac cagtatggac gccataatac
     1261 gtatttacgc gccgtgtaaa gcagaagaat tagcacgagt agtgaagccc ggcggctggg
     1321 tcattactgc cacgccggga ccgcgacatt tgatggagct gaaggggctg atttacaatg
     1381 aagtacatct tcatgcacct catgcagaac aactggaagg ttttacatta cagcagagtg
     1441 cggagttgtg ttatccgatg cgtcttcgcg gtgatgaagc cgtcgcatta ttgcagatga
     1501 cgccgtttgc ctggcgtgcg aagccagaag tctggcaaac actggcagca aaagaagtgt
     1561 tcgactgcca gacggacttt aatattcacc tctggcagcg ttcttattaa ccgtggaagt
     1621 gcgtccagag gatctggacg ccgatgccga tcagtaccag cccgccgaga atttccgctt
     1681 ttttcccaat aattgagccg ataaagcgac caaccatcat ccctaatgtt gacataatca
     1741 aggttgcaca accaatggcc aatgcggtcg cgataatgtt gacctgcagg aaagcaagac
     1801 caacacccac agccatggca tccaggctgg tggcaatcgc ggtggttacc agtagccaga
     1861 aaccgtgtcg acggcgcggc tcttcatctt catcatctgc gccacgaaaa ccctcaataa
     1921 tcattcgccc gccgaggaat atcagcagca caaacgcaat ccagtggttc cattcaagga
     1981 caaaccggct ggctaacatg cccattcccc agccgatcag cggcgtcagg gtttcgacgg
     2041 caccaaaaat aaggccggtt cgcaatgctt cagaaaattt cggtttatgg agggtggcac
     2101 ctttaccgat tgatgcagca aatgcatcca tcgacatacc aaacgcaaga agaacagtag
     2161 cagtgatatt catgacaatg tcctgaccgg ggtatccata aaacacatca tcgcccccag
     2221 caaacatgca tacatgaaca acaagccgtg atggttttcg cgttcatgca ggcatagcga
     2281 ttgatgtgca tatggtctcg cctgactgaa agtattcagt ccgtacgtgc cacgttttgc
     2341 aacgagtatg ttgacacgta catttccgga atctggaaat cggctactcc ccaaatgagg
     2401 gcgcaacctt aacatatttt gagaatataa aacaactgtt ggaatatatt atttcattgc
     2461 tttattgata acgaattcat ttagatttat atatcaatga aacgttaaaa taaataacaa
     2521 ataagggaag aggtaatata gcctaagcta tgtctgatta ttaaaaatac actaaacata
     2581 gctttggcta aattcataac ttattgagtt aaaacgataa gcttataaat tctttccaga
     2641 ttgtcgatat ttcgaacgcg gattaacagc cgacgctgtt ctaattgcat caccaacacg
     2701 ccatcttccg acaagttcat cgctttgatt cggctatatt caatccagac attggcgaag
     2761 aaaaaacctt tttgtttaaa gatgatcttc ggaacgcgga tccagaatat ataaaaaccc
     2821 atcagagcca gtgcgcttaa taaccatgtc gttattaatg caccatgatt cgtgacgttg
     2881 ttatagataa gaatgacaat caatccgacg aagataacgc tatcgatgcg accacgccgg
     2941 agcaaaggaa ttgccagcag ggtggggccg ttacggcggg gcatgatgaa ctgatcgtag
     3001 atcgcgaagg ccaggagtgc ggcgatgaaa agaatcagta ccaggtccgt gattgtcatt
     3061 aatcctccag ataaaaaaac ggggccaaaa ggccccggta gtgtacaaca gtcttacagt
     3121 cccagcaggc cgcaagcgta accagcgata ccgatgacga agaagccaac gatgatccac
     3181 agcgggttaa cttttttgcg cagtagccac atacaagcaa aggtcagcag cagtggtacc
     3241 aggcctggca ttaactggtc cagaatagtc tggacagtag taacgtgttc tttgcccgtc
     3301 tggtcagtaa tgcgagagac aaccagcggg atgttgacat gtgtccactt gttaaccaat
     3361 gcccccatga caaacaggcc gaggatagac gccccttccg tcagtttttg caggaagcca
     3421 ccacccatat ctttaacgat atcgatacct ttggagtaac catacgctac gccgtagtaa
     3481 cgggttgcca gacgcaccag gttaaacagg atgaagaaca gcagcggacc taacaggctg
     3541 ccgctcatcg cgataccggc acccagtgct gcaaataccg gacgtacggt tccccagaag
     3601 atcgggtcgc ctacaccagc cagcggcccc atcaaaccga ctttgatacc gttgatagca
     3661 ccgtcgtcga tctctgcgcc attagcacgc tgttcttcca gcgccagggt tacgccgaga
     3721 atcggcgcag ccacgaacgg ctgggtgtta aagaactcca ggtgacggcg aatagcttgt
     3781 ttacgagctt cgttgttctc agggtagagg cgacgaattg ccggtaccat agagaagcag
     3841 aaacccagtg cctgcatacg ttcgaagttc catgaaccct ggaagaggtt agaacgcagg
     3901 aagacgccac gaatatcact ttgagtgagt tttttctcgg tggtagtttg agttgtatca
     3961 accatttcgc tcacctgtta gtccagttcg ttatcgagat cgttgttacc agcagcctga
     4021 gcaggcgcac cggctacgcg gttgtatttc gggctaagtt ggatgtagag cactgccata
     4081 acagtaccga tcacacccag agcaaccagg ttaaagttgg tgaatgctgc ggttacgaag
     4141 ccgaggtaga agaacggcat caggtagcca gcacgcatca tgttgataac catcgcataa
     4201 ccaaccacca cgatcatgcc accggcgata ttcagaccat tggtcaccac ttccggaatc
     4261 gcattcagca tgttctgtac ttcgctggta ccaacagaca gcgcaacgat gacggccgga
     4321 atagccacac gcattgcttg caggaacaga gaagaaacgt ggatccagga aatcgctgtc
     4381 aggttgccgt tatcagcagc cttatccgca gcgtgctgga aagcaacggt aatagtacga
     4441 acgatgatgg tcagtacctg gcccgcagcg gccagaggga ttgccagtgc gatacctgca
     4501 ccaatgctct gatgacctgc gataaccaga atggtagaaa tgatagaagc cagagcggcg
     4561 tcaggcgcaa ctgcagcacc gatgttcatc cagcccagcg cgatcatttc cagcgtacca
     4621 ccgataataa taccggtttt catatcccca agaacgatac ccaccagggt acacgcgatt
     4681 agcggacggt gaaactgaaa ttcatcgagg attgatccca tacctgcgat acaggctacg
     4741 ataaatacca gcacaatttg aagagtggta atctccattg tacttctcct gtttacgtaa
     4801 gacttaagtg tgaaaactga gtgataatca acacaatacg ttacttatcg attttgctga
     4861 tcagatccat cattttcagt ttcggatcgg tggaaacctt acggacttcc agctcaatac
     4921 cgcgcgcatt cagtttcttg aacgcctcga tatctttttc atcaaccgaa accgcgttat
     4981 tcacctgggt tttaccctga cggaatgcca taccaccgac gttaacagag gtgattttca
     5041 cgccgccttc aacgagacgc tctacatctg ttgggttggt aaataacagc attacgcgtt
     5101 cgccagcata tttcgggttg ttgtagacgc gaatcatttt ggcaacatca actacgtgtg
     5161 ctgttacgcc cggaggtgca acctgggtga gcagtgtctt acgaacggta tccgcagcca
     5221 cttcatcact aacaacaata atacgggaga cattggtttc tttggtccag cgggtggcga
     5281 cctgaccgtg aatcagacgg tcgtcgatac gcgcaaggcc aataaccatg tagtcgtttg
     5341 gccccattgg ttttgccgga gttggagccg cttttggtgc tgcggcagcg ggtgctggcg
     5401 cggctttttc aaccggtttg gctttcagtg ctttcacacc ttcacggcct gtttctactg
     5461 ccagcgcaac cagttcatca aagcttgggt catcatcacg agccattaac gtttccacga
     5521 gcattggaat gttaacgcct gcaatgactt cataatgctc tttgtcgacg acaatgcggc
     5581 tggcagcatt gaacgggctg cctccccatg tatcaacgag aaacagcacg cctttagtgg
     5641 tgtcgagttt tgccaactga gcgttgtact tttcaatcag cgtttcggca ttttcacctg
     5701 gaacgaaatc gatccagccg acgttttcct gctcgcctaa cagcatttct gccgttttaa
     5761 gcaactgctc tgcagcccaa ccatgtgtgc ctataacaat agcaatggtc acttgctacc
     5821 tcctttatta tcgttaacac ctcaacgtgc cagatgtatt tttgaatcgt cgtccacaat
     5881 cgaatcgatt cagataaggg ctacaaccaa aaacccctgc gtttcgcgat ttattttaga
     5941 tatcgaaaaa attattttat gtgatgaaga tccgtaattt aactttcgat tagcagaaat
     6001 ttcgaaaggt aaaatatcct tgtcacattc gtttgcaaag gaaggtaaat ctttgccaaa
     6061 tcagaggcgt ctctgatatg tttaactccc gtttaacaac catggagtat agggcagtag
     6121 cccgcagtat ggatcgtcac cgacgtcatt tcagcatcag gccttttaac gcctgccttt
     6181 ctggcactct atgccgcacc tttcgtttgc attttgtcgt tacgcctgca ttatttctgg
     6241 cgtcgaatag ctattcctta agcaggagct tgtcatggaa ttcttaatgg acccctcaat
     6301 ttgggcgggg ctactcacgc ttgttgttct cgaaattgtg ctgggtatcg ataacctggt
     6361 cttcatcgcc attcttgctg acaaactgcc gccaaaacaa cgcgataaag cgcgtttgct
     6421 ggggttatca ctggcgctga ttatgcgtct ggggctgctg tcgctgattt catggatggt
     6481 cacgctgacc aaaccgctat ttaccgtcat ggatttctcc ttctccggac gcgacctgat
     6541 tatgttgttc ggggggatat tcttgctgtt caaagcaaca accgaactgc atgaacggct
     6601 ggaaaaccgc gatcatgatt ccggccacgg taaaggctac gccagtttct gggtggtcgt
     6661 cacacagatt gtcatccttg acgccgtctt ctcgttggat gcggtaatta ctgcagtagg
     6721 gatggttaac catctgccgg tgatgatggc ggcggtagtg attgcgatgg cggttatgtt
     6781 gctggcatcc aaaccgctga cgcgattcgt taaccagcac cccacggtgg tggtgctctg
     6841 tctgagcttc ctgttaatga ttggtcttag tctggtggca gaaggtttcg gtttccacat
     6901 tccgaaaggt tacctgtatg ccgcgattgg cttctcgatc atcatcgaag tgtttaacca
     6961 gattgcgcgt cgcaacttta ttcgccacca gtcgactttg ccgctgcgag cgcgtactgc
     7021 cgatgccatc ctgcgtttga tgggcgggaa acgtcaggcc aatgttcagc acgatgtcga
     7081 taacccgatg ccgatcccgg aaggtgcatt tgccgaagaa gaacgttaca tgattaacgg
     7141 cgtactgacg ctggcgtcgc gttctctgcg cgggatcatg acgccgcgcg gtgaaataag
     7201 ctgggttgac gctaatctcg gggtcgatga aatccgcgag caactgctct cttcaccgca
     7261 cagtctgttc ccggtatgtc gcggtgaact ggatgaaatc atcggtattg tacgtgctaa
     7321 agaactgctg gtggcgctgg aagagggcgt tgatgtggcg gcgattgctt cggcgtctcc
     7381 ggcgattatc gtcccggaaa ccctcgatcc gatcaacctg ttgggcgtgc tgcgtcgtgc
     7441 tcgcgggagc tttgttatcg tgaccaacga gtttggtgtg gtacaaggtc tggtcacgcc
     7501 gctggatgtg ctggaagcca ttgcgggtga attcccggac gctgacgaaa cgccggaaat
     7561 cattactgat ggtgacggct ggctggtaaa aggcggtaca gatttgcatg ccttgcagca
     7621 ggcgcttgat gttgagcacc ttgccgatga cgatgatatc gcgacggtcg cgggcctcgt
     7681 gatctcggca aatggtcaca ttccccgtgt gggcgatgtg attgatgtag ggccactgca
     7741 tatcaccatc attgaagcca atgattatcg tgttgatctg gttcgcattg ttaaagagca
     7801 accggcgcac gatgaagatg
//
LOCUS       DADKRT010000187         7756 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.190, whole genome shotgun sequence.
ACCESSION   DADKRT010000187 DADKRT010000000
VERSION     DADKRT010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7756
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.190"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..588
                     /locus_tag="JQ356_003587"
     CDS             <1..588
                     /locus_tag="JQ356_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HAY4623559.1"
                     /translation="GDNKDATPIEQCTFDVETKNGLPSTVQLFYEESKDNEPLANIHF
                     QAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQ
                     FEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQL
                     ISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK"
     gene            951..1988
                     /gene="dusA"
                     /locus_tag="JQ356_003588"
     CDS             951..1988
                     /gene="dusA"
                     /locus_tag="JQ356_003588"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HAY4623560.1"
                     /translation="MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYF
                     LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEA
                     RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
                     QDSYEFLCDFINTVSGKGECGMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
                     PHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDAYPV
                     AVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVL
                     EHALKLVADKR"
     gene            2122..2364
                     /gene="pspG"
                     /locus_tag="JQ356_003589"
     CDS             2122..2364
                     /gene="pspG"
                     /locus_tag="JQ356_003589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HAY4623561.1"
                     /translation="MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALM
                     IKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY"
     gene            complement(2529..3512)
                     /locus_tag="JQ356_003590"
     CDS             complement(2529..3512)
                     /locus_tag="JQ356_003590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HAY4623562.1"
                     /translation="MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFID
                     TYIRSGLYPPPSLPSGSGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIN
                     ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW
                     AKALGAKLIGTVGTAQKAQSALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVG
                     RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL
                     TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP"
     gene            3595..5010
                     /locus_tag="JQ356_003591"
     CDS             3595..5010
                     /locus_tag="JQ356_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase DnaB"
                     /protein_id="HAY4623563.1"
                     /translation="MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
                     AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKT
                     AGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASL
                     SRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREH
                     GGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            5063..6142
                     /gene="alr"
                     /locus_tag="JQ356_003592"
     CDS             5063..6142
                     /gene="alr"
                     /locus_tag="JQ356_003592"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HAY4623564.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNE
                     EQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHF
                     ARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVS
                     PLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERI
                     AEMTKVSAYELITRLTSRVAMKYVD"
     gene            6395..7588
                     /gene="tyrB"
                     /locus_tag="JQ356_003593"
     CDS             6395..7588
                     /gene="tyrB"
                     /locus_tag="JQ356_003593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709866.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HAY4623565.1"
                     /translation="MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIP
                     QLKAVAEAEARLNAQPHGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNSVRF
                     NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGF
                     SAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQL
                     KATVRRNYSSPPNLGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM
                     PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
                     FAAVM"
BASE COUNT         1882 a         1854 c         2026 g         1994 t
ORIGIN      
        1 ggggataata aagatgcgac tcccattgaa caatgtactt ttgatgtaga aactaagaat
       61 ggccttccct ccacggttca gctattttat gaggaatcta aggataatga acctttagcg
      121 aatatacatt ttcaagcaat aggttctggt tttttaacgt ttgttaatgc ctgccaggaa
      181 catgatgaca acagcttaaa attatttgct tcgctgttaa tttcactttc atattctagt
      241 gcctacgcag atttatcaga aacagtgtat attaatgaaa ataatgagag ctacctgaaa
      301 gctcagtttg aaaaattatc tcaacgtgat atgaagaagt acctgggaga gatgaagcgt
      361 ctggctgatg ggggagaaat gaattttgat ggctatctgg ataagatgtc acatctggtg
      421 aatgaaggga cgctcgatcc tgatatttta agcaaaatgc gagatgctgc accacaatta
      481 attagcttcg cgaagtcgtt tgacccaacc tcaaaggaag agattaaaat acttacagac
      541 acttctaaat taatttatga tttgttcggg gttaaatcgg agaaataata tgtgaagttc
      601 ttcgatagta tggaaggcat tatataaaag gacccaatat ttattgggtc cttttttctc
      661 tatcaatgct attagcaggg agatatatca ccaaagttta atgtgtgatt ttttatttat
      721 cgtcgaacct ggattgttta tcattggcct taacaaagtt aacggctaat aagattattt
      781 ccatcacttc gtgagagctt catgccttga gaggatctca attttctttt gcaatgagac
      841 aggcgcttcc tgttgttatg gtatagtacc ccgctattga gcctcctgaa tagtgatgct
      901 gaataacata accccatgat atatcgataa aataatctct acatttgaaa atgcacggta
      961 attctgaaat gcaaaaaatc aaccaaacca gcgcaatgcc tgaaaaaact gacgttcact
     1021 ggagtggtcg gtttagcgtt gcaccaatgc tcgactggac ggacagacat tgccgctatt
     1081 tcttgcgtct gctttcccgc aatacgttgc tgtataccga aatggtgacc acaggggcga
     1141 ttattcacgg taaaggtgat tacctggcgt acagtgaaga agaacatccg gtagcgttgc
     1201 aactcggcgg tagcgatccg gcggcgctgg cacagtgtgc gaagctggca gaagcgcgtg
     1261 gatatgatga gatcaacctg aatgtcggct gcccgtctga ccgggtgcag aacggcatgt
     1321 ttggtgcgtg tctgatgggt aatgcgcagc tggttgccga ttgcgtgaaa gcgatgcgcg
     1381 atgtggtgtc gattccggtg acggtgaaaa cgcgtattgg catcgatgac caggacagct
     1441 atgaatttct ctgcgatttc atcaacaccg tttccggcaa aggcgagtgt gggatgttca
     1501 tcatccatgc acgtaaagcc tggctttcgg ggttaagccc gaaagaaaac cgtgaaatcc
     1561 cgccgctcga ttatccgcgt gtgtatcaac tgaagcgtga ctttccgcat ctgacaatgt
     1621 cgattaacgg tggtatcaag tcgctggaag aggccaaagc acacctgcaa catatggatg
     1681 gcgtgatggt cgggcgcgag gcgtatcaga atccgggtat tctggcggcg gtagaccggg
     1741 agatctttgg ttcctcggat accgatgcct atccggtggc ggtagtgcgc gccatgtatc
     1801 cgtacattga gcgtgaactc agccagggga cgtatctcgg ccatattacc cggcatatgt
     1861 tgggcttgtt ccagggtatt cctggcgcgc ggcagtggcg gcgttattta agtgaaaatg
     1921 cccataaagc gggtgcagac attaatgtgc tggaacacgc gctcaaactg gtggcggata
     1981 agcgttaact tttcaccaaa aagtagtcaa attcaccacg ccctgcgcac cgtcgcgggg
     2041 cgttttgctg ttaaatcaat agattatttt tggcatgatt cttgtaatgc cagcaagaga
     2101 tttcatattt gggagagcat catgctggaa ctactttttg tgattggctt ttttgtcatg
     2161 ctgatggtca ccggcgtttc gttgctgggc attatcgccg cgctggttgt ggcgacggcc
     2221 attatgttcc tcggcggtat gctggcattg atgattaagt tgctgccgtg gttactactg
     2281 gcgattgcgg tggtgtgggt tattaaggcg attaaagcac caaaagtgcc taaatatcag
     2341 cgttatgacc gctggcgtta ctaagggatt gtgcggatga tcacaaccta aggttttatc
     2401 cttagaacaa aataggaatt gataatcaaa tctgtcacta ttgcgcctct aacagattca
     2461 tcgtgctgta ccctacatac agccgactat aaaaagaaag ggcttcccag gtggaagccc
     2521 tatttctttt atggaatcag caggctggaa ccttgcgtcg cccggctttc cagaatctca
     2581 tgcgcacgct gcgcatcctt cagcggatat ttctgctgct cggcgacatc gaccttaatc
     2641 acaccgctgg caatcaaaga gaacagttca ttactggcct cggttaattc ctcccgtgtg
     2701 gtgatatagc cttgcaggga agggcgtgtc acatacaacg agcctttttg attgagaatg
     2761 cctaagttca caccggtaac cgcacctgat gagttgccaa aactgaccat taagccgcgg
     2821 cgttgcaggc aatccagcga ccgttcccag gtgtctctgc ccacggaatc gtacactacg
     2881 cgcactttct taccgccggt gatctctttc aatcgctcaa ccagattctc ttcacgatag
     2941 ttaataacct gccacgcgcc ggcttttagc gcgctctgcg ctttttgcgc ggttcctacg
     3001 gtgccgataa gtttcgcgcc cagagctttt gcccactggc aggcaatcaa gccaacgccg
     3061 ccagccgctg cgtggaacag gaactgttca tcgggtttaa tttcataggt tttgcgcagc
     3121 agataataaa ccgttaagcc tttcaggaaa gatgctgcag cttgctcaaa agaaatagcc
     3181 gcaggcagaa tcgccgcttt atccgcatta atgttatgca cagagctgta agcgcctaac
     3241 gccgactgcg catagactac acgatcgcct gccttaatat gctttacacc actgccgact
     3301 ttactcacga tgcctgccgc ttcggtacct gatccgctgg gtagtgatgg cggcgggtaa
     3361 aggccgctgc ggatatacgt gtcgataaaa ttgatgccga tggctttatt ttcgacctgg
     3421 atttcattct ctgccggatc ggcaggagtg aactctacgg cttgaagtac ttccgggcca
     3481 ccgtgcttgt gaaattcaat tcgtgttgcc atgtgtcctc cagaacgtat cgtcagggtc
     3541 tgcttcatat ggtaaagttt cgacccattc tttatctcgg taactccatt cactatggca
     3601 ggaaataaac ccttcaacaa acagcaggct gaaccccgcg aacgcgatcc acaagttgcc
     3661 gggctgaaag tgcctccgca ctcgatcgaa gcggagcagt cggtgttggg cggtttaatg
     3721 ctggataacg aacgctggga cgatgtagcc gagcgtgtgg tggcagacga tttttacacc
     3781 cgcccacacc gccatatctt tactgaaatg gcgcgtttgc aggaaagcgg tagtcctatc
     3841 gatctgatta cccttgcgga atcgctggaa cgccaggggc aactcgatag cgtcggtggt
     3901 tttgcttatc tggcagagct gtcaaaaaat acgccaagtg cggcgaacat cagtgcttat
     3961 gctgacatcg tgcgtgaacg tgccgttgtc cgtgagatga tctcggttgc gaatgagatt
     4021 gctgaagccg gttttgatcc gcaggggcgt accagcgaag atctgctgga ccttgctgaa
     4081 tcccgcgtct ttaaaattgc cgaaagtcgt gcaaacaaag acgaagggcc gaagaacatc
     4141 gccgatgtgc tcgacgcaac cgtggcgcgt attgagcagt tgtttcagca gccacacgat
     4201 ggcgttaccg gagtaaacac cggttatgac gatctcaaca aaaaaaccgc tggcttgcag
     4261 ccgtcggatt tgatcatcgt cgccgcgcgt ccgtcgatgg gtaaaacaac atttgcgatg
     4321 aacctcgtcg aaaacgcggc gatgttgcag gataaaccag tacttatctt ctcgctggag
     4381 atgccttcag aacagattat gatgcgttct ctggcgtcgc tgtcgcgcgt tgaccagact
     4441 aaaatccgta ccgggcagct cgatgatgaa gactgggcgc gcatttccgg caccatgggt
     4501 attttgctcg aaaaacgcaa tatctatatc gatgactcct ccggcctgac gccaacggaa
     4561 gtgcgttccc gcgcacgacg tattgcccgt gaacacggcg gcatcgggct tatcatgatc
     4621 gactacctgc aactgatgcg cgtaccggcg ctttccgata accgtacgct ggaaattgca
     4681 gaaatctctc gctcgctgaa agcactggcg aaagaactga acgtgccggt ggtggcgctg
     4741 tcccagttga accgttctct ggaacaacgt gccgacaaac gcccggtcaa ctccgacctg
     4801 cgtgaatctg gctctatcga gcaggatgcg gacttgatca tgtttatcta tcgtgatgag
     4861 gtgtatcacg aaaacagtga tttaaaaggc atcgcggaaa ttattatcgg taaacaacgt
     4921 aacggcccaa tcgggacggt acgcctgacc tttaacggtc aatggtcgcg cttcgacaac
     4981 tatgcggggc cgcagtacga cgacgaataa taattatttt atgaattagg caattaaagc
     5041 aaacacttat caaggaacac aaatgcaagc ggcaactgtt gtgattaacc gccgcgctct
     5101 gcgacacaac ctgcaacgtc ttcgtgaact ggcccctgcc agtaaaatgg ttgcggtggt
     5161 gaaagcgaac gcttatggtc acggtcttct tgagaccgcg cgaacgctcc ccgatgctga
     5221 cgcctttggc gtagcccgtc tcgaagaagc tctgcgactg cgtgcggggg gaatcaccaa
     5281 acctgtactg ttactcgaag gcttttttga tgccagagat ctgccgacga tttctgcgca
     5341 acattttcat accgccgtgc ataacgaaga acagctggct gcgctggaag aggctagcct
     5401 ggacgagccg gttaccgtct ggatgaaact cgataccggt atgcaccgtc tgggcgtaag
     5461 gccggaacag gctggggcgt tttatcatcg cctgacacag tgcaaaaacg ttcgtcagcc
     5521 ggtgaatatc gtcagccatt ttgcgcgcgc ggatgaacca aaatgtggcg caaccgagaa
     5581 acaactcgct atctttaata ccttttgcga aggcaaacct ggtcaacgtt ccattgccgc
     5641 gtcgggtggc attctgctgt ggccacaatc gcattttgac tgggtgcgcc cgggcatcat
     5701 tctttatggc gtctcgccgc tggaagatcg ctccaccggt gccgattttg gctgtcagcc
     5761 agtgatgtca ctaacctcca gcctgattgc cgtgcgtgag cataaagccg gagagcctgt
     5821 tggttatggt ggaacctggg taagcgaacg tgatacccgt cttggcgtag tcgcgatggg
     5881 ctatggcgat ggttatccgc gcgccgctcc atccggtacg ccagtgctgg tgaacggtcg
     5941 cgaagtaccg attgtcgggc gcgtggcgat ggatatgatc tgcgtagact taggtccaca
     6001 ggcgcaggac aaagccgggg atccggtcat tttatggggc gaaggtttgc ccgtagaacg
     6061 tatcgctgaa atgacaaaag tgagcgctta cgaacttatt acgcgcctga cttcaagggt
     6121 cgcgatgaaa tacgtggatt aatcgttctg taatatttga ttgtctgtgc cggatgcggc
     6181 gtgaatgcct tatccggcca ataaaatcct aaaaattcaa taagttgatg ttctttcatg
     6241 ctcttataaa ggtcgtgcct ctggcggatg ttcgtttgtc atgagtctca ctctgttgct
     6301 aattgccgtt cgctcctgaa catccactcg atcttcgcct tcttccggtt tattgtgttt
     6361 taaccacctg cccgtaaacc tggagaacca tcgcgtgttt caaaaagttg acgcctacgc
     6421 tggcgacccg attcttacgc ttatggagcg ttttaaagaa gaccctcgca gcgacaaagt
     6481 gaatttaagt atcggtctgt actacaacga agacggaatt attccacaac tgaaagccgt
     6541 ggcggaggcg gaagcgcgcc tgaatgcgca gccccatggc gcttcgcttt atttaccgat
     6601 ggaagggctt aacagctatc gccatgccat tgcgccgctg ctgtttggtg cggaccatcc
     6661 ggtactgcaa caacagcgcg tagcaaccat tcaaaccctt ggcggctcag gggcattgaa
     6721 agtgggcgcg gatttcctga aacgctactt cccggaatca ggcgtctggg tcagcgatcc
     6781 tacctgggaa aaccacgtag caatattcgc cggggctgga ttcgaagtga gtacttaccc
     6841 ctggtatgac gaagcgacta acagcgtgcg ctttaatgac ctgttggcga cgctgaaaac
     6901 attacctgcc cgcagtattg tgttgctgca tccatgttgc cacaatccaa caggtgccga
     6961 tctcactaat gatcagtggg atgcggtgat tgaaattctc aaagcccgcg agcttatccc
     7021 attcctcgat attgcctatc aaggatttag tgccggtatg gaagaggatg cctacgctat
     7081 tcgcgccatt gccagcgctg gattacccgc tctggtgagc aattcgttct cgaaaatttt
     7141 ctccctttac ggcgagcgcg tcggcggact ttctgttctg tgtgaagatg ccgaagccgc
     7201 tggccgcgta ctggggcaat tgaaagcaac agttcgccgc aactactcca gcccgccgaa
     7261 tttgggtgcg caggtggtgg ctgcagtgct gaatgacgag gcattgaaag ccagctggct
     7321 ggcggaagta gaagagatgc gtactcgcat tctggcaatg cgtcaggaat tggtgaaggt
     7381 attaagcaca gagatgccag aacgcaattt cgattatctg cttaatcagc gcggcatgtt
     7441 cagttatacc ggtttaagtg ccgctcaggt tgaccgacta cgtgaagaat ttggtgtcta
     7501 tctcatcgcc agcggtcgca tgtgtgtcgc cgggttaaat acggcaaatg tacaacgtgt
     7561 ggcaaaggcg tttgctgcgg tgatgtaatg caggaaagca ggctggagtt acccagcctg
     7621 cagtgaaatt aaactgtcgt cgctttcact atttctttgt agatgatttt tttgatgccg
     7681 ttgttctacg tgagagataa taaaacgttg tcagttcttt tattgttaag tttatcccaa
     7741 ttaactggaa ttcctt
//
LOCUS       DADKRT010000188         7639 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.191, whole genome shotgun sequence.
ACCESSION   DADKRT010000188 DADKRT010000000
VERSION     DADKRT010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7639
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.191"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            564..3977
                     /locus_tag="JQ356_003594"
     CDS             564..3977
                     /locus_tag="JQ356_003594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000438152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HAY4623566.1"
                     /translation="MEQSLNFEMLRSQWPELAELACMAERYVHSDPESCLVKLRNYTE
                     LMVRWLYRQERLPEGIKANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIK
                     AKDTYWLLKEAYLLGIWLYVRYAHGNVDDCPKFTLPPLTQSSGRADEKRLEDAIKAQD
                     ESRERELALQRALQQEQEKAEHLTQRLNEARARNQHVADILSIDEAETRRRLIDSRLL
                     AADWNVGEELKNTDQVTQEHPVKEQPTTSGDGYADYVLWDEAHKPLAVVEAKKTSVNA
                     EQGRIQARLYADWLEKEYGQRPVIFYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQ
                     YLIQQRETRLPLNRVPHVKDNEGKAVAGRLYQLETIARVSERFTNKYRQSLIVQATGT
                     GKTRVAIALSKLMIDARWVKRVLFLCDRKELRKQAANAFNQFTNEPLYVVGKSKKADR
                     QNARIYIATYPGMMKIMDHFDVGYFDLIIADESHRSIYNVYGDLFKYFDALQIGLTAT
                     PIDMVSKTTFGLFGCEGRIPTANYSLEDAIADNNLVPYEVVTHTTEFLREGIKREKLS
                     DAQIRELEEQGIDPNTLEFDGKALDEAIYNKDTNRYILRNLMENGLKDRDGQLPGKTI
                     IFARNHKHALLLNELFDDMYPQFAGRFCQVIDNYDPRAEQLIDDFKGLDESTNKELTI
                     AISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRGTRLCPGLYGYDDNGKPLDKQ
                     KFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVMLGAAAQRKFDKQAVDLVAH
                     QLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQDLLSVLAPLMQWLDVRG
                     QSDAIRFDMDILAAQTARYTNPEELDVLWPIIVEKVERLPPHLAQVQQQGQRINQLRN
                     LSWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDANLIQTETRKTNIR
                     SIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRAL
                     KEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLKNHIRDYG
                     TIEMRQLFEQPFTHIHNEGVTGVFPDIAQIARLQKIVEELGVVTDAATV"
     gene            4041..5675
                     /locus_tag="JQ356_003595"
     CDS             4041..5675
                     /locus_tag="JQ356_003595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HAY4623567.1"
                     /translation="MITGDLKSKIDGLWEDFWVGGITNPLTVIEQITYLMYSRMLDTQ
                     EQRDEKRKQIAGIDFKPRFAPEQQEFRFSHYSNLGSDEMMEVVRDGVFQHFRQLGQAD
                     ASKVTLLGNFMKDARLEIVKPSLLTKAVEVIKNLPLDRGDTKGDLYEYLLSKLTTAGI
                     NGQFRTPRHIIRTMVEMMEPNPARGETICDPACGTGGFLATSYEYLLEKYSSLESIHT
                     EIGTNERGELEEQKIFTGDLLTPWRNHVDNNMFHGYDFDTTMLRIAAMNLIMHGVDAP
                     DIHYQDTMSQSFSTNFPQASKNAFNLILANPPFTGSLDEEDIDSTLSAMVKTKKTELL
                     FLARILQMLKVGGRSATIVPQGVLFGSSKAHQSLRKTLVEDNQLETVINLPSGVFKPY
                     AGVATAILIFTKGGQTDEVWFYDLQNDGYSLDDKRNPIKDNDLPHLLASWKHYRTLRG
                     LPVDNFMGKKLASLLKQQYPEGINAGVDFKDRTQAAFVVPKADIAAQKYDLSINRYKE
                     VVYQAEEYEDPKVILKRLKDLEKEILADLDELEGML"
     gene            5684..6754
                     /locus_tag="JQ356_003596"
     CDS             5684..6754
                     /locus_tag="JQ356_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001438891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HAY4623568.1"
                     /translation="MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLC
                     SYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKDNNKLDLRYLFYILSGIDLTKKT
                     ITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
                     ATMYGNPITNPKKWPVHLMGEIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKY
                     ATYIPQEKAKRIFEVDDVMIARYGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFY
                     LLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDEILDRLARIEKFKEK
                     IEISLNHLEIQFLSLQKRLIGF"
     gene            complement(6879..7595)
                     /locus_tag="JQ356_003597"
     CDS             complement(6879..7595)
                     /locus_tag="JQ356_003597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623569.1"
                     /translation="MLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKIEE
                     GVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLP
                     NICKGNARIPIFHFLNHAKLINPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRS
                     ETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELLKILKKYIDEAMNTQVL
                     SSNFCKLVCIYDYIKNSHRY"
BASE COUNT         2222 a         1739 c         1790 g         1888 t
ORIGIN      
        1 tcctgttctc ccaaatatca tggtattgat acgggagatt atgccgtaca ggtacgacac
       61 gttatgtcgt gccaaagggg agtggataga aaaaatggcg aagatgcgaa aagttgatta
      121 atgcattgaa aaaaatgaat taataatgaa cttgggtaaa agcgccatca aaatacgaca
      181 cgacctgtcg tattttgtgt tagccgggaa aagatatctg ctacttacta aaatgattta
      241 gtgctgaaaa tatttataag ccaataaata gacaggtatt acggagtaac gcccaggcta
      301 ttttaacgag cctgctgttt tattggctca aaaaacatat cccatagatg atcagccata
      361 cccgcgttag tgagcaaggt atcccttgag tagccagggc tgaagacgcc cattgatggg
      421 cgaaaaccaa ggttctggcc gttaaagcgg ctatgtcgtt aaacacatca ccaccatatg
      481 ccatccggct cacttcgtcg gccaaattag tgtgatattc tttccagaat ttctgttgta
      541 tccacaacat aaggcgatga ttgatggagc agtctctcaa ttttgaaatg ttgcgcagcc
      601 agtggccgga actggcagaa ctcgcatgta tggcagagcg ctatgttcac tccgatccgg
      661 aaagctgcct ggttaagctg cgcaactaca ccgaattgat ggtgcgctgg ttgtatcgtc
      721 aggagcggtt gccggaaggt attaaggcta atctttacga tttaatgaac gctgatgtct
      781 ttaccagcat gatgccggaa gccatcatca tgaaaatgga tgcgctgcgt atccatggca
      841 accgtgccgc gcacggcgga cgtatcaaag ctaaagatac ttactggctg ctcaaagaag
      901 cgtatttgtt gggaatttgg ctgtatgttc gctacgccca cggtaatgtt gatgactgcc
      961 ccaaatttac actccctcca ttaacacaat cttcaggtcg tgcagatgaa aaacgtctgg
     1021 aagatgcaat caaggctcag gatgaaagcc gtgagcgcga actggcgcta caacgcgcac
     1081 tacagcaaga acaggaaaag gccgaacacc tcactcaacg cctgaatgaa gccagagcgc
     1141 gtaaccagca tgttgccgat attctctcta ttgatgaagc ggaaacccgc cgtcgcctga
     1201 ttgactctcg cttacttgca gccgactgga atgtagggga agaacttaaa aacacggatc
     1261 aagtcacaca agaacatcca gtcaaagagc aacccaccac ctctggtgac ggttatgcag
     1321 actatgtctt gtgggatgag gcacacaaac cgttggcggt ggtggaagca aaaaaaacca
     1381 gcgtcaatgc cgagcaagga cgaattcagg cccggctgta tgcagactgg ctggaaaaag
     1441 aatacggtca gcgtccggtc atcttctaca ccaacggcta tgatatctgg ctgtgggatg
     1501 accataaaac tcatggttat cccccgcgtc gggtgtttgg cttctacagc aaggaaagcc
     1561 tgcaatatct tattcagcag cgtgaaaccc gtctgccgct gaacagagtg ccacacgtaa
     1621 aagataacga aggtaaggcc gttgccggac gtttgtacca gctcgaaacc attgcccgcg
     1681 tcagtgaacg gtttaccaac aagtaccgac aatcgttaat tgttcaggct acgggtacag
     1741 gcaaaacccg cgtggcaatt gcactaagca aactgatgat tgatgcccgc tgggtaaaac
     1801 gcgtcctgtt tctttgcgac cgtaaagaac tgcgtaaaca ggcggcaaat gcctttaatc
     1861 aattcaccaa tgagccgctg tatgtggtcg ggaaatcgaa aaaagcagac aggcagaatg
     1921 ccagaatcta catcgctacc tatcccggta tgatgaaaat catggaccat ttcgatgtcg
     1981 gttatttcga tttgatcatc gccgatgaat cccaccgctc tatctacaac gtctacggcg
     2041 atctgtttaa gtattttgat gccctccaga ttggcctgac ggccacgcca attgacatgg
     2101 tgagtaaaac cactttcggc ctgtttggtt gtgaaggacg tattcctacc gccaactaca
     2161 gcctggaaga tgccatcgcc gataacaatc tggttcccta tgaggttgtc acacacacaa
     2221 cagaattcct gcgcgaaggt atcaaacggg agaaattaag cgacgcacaa atccgcgagc
     2281 tggaagaaca aggcatagat cccaatacgc tggagtttga tggcaaggcg ctggatgagg
     2341 cgatctacaa caaagacacc aaccgctata tcctgcgtaa cctgatggaa aatggcctga
     2401 aagatcggga cggccagttg cctggtaaaa ccatcatttt cgcccgtaac cacaaacacg
     2461 cgctgctgtt gaatgaattg ttcgacgata tgtacccaca gtttgccggg cgcttctgcc
     2521 aggtcatcga caactacgat ccccgcgccg agcaactgat tgatgatttt aaagggctgg
     2581 atgaaagcac caacaaagag ctgaccatcg ctatctccgt tgacatgctc gataccggta
     2641 ttgatgtccc ggaaattgtg aatctggtct ttgccaaacc ggtcaaatca aaagtgaagt
     2701 tctggcagat gattggccgt ggtacgcgcc tctgtccggg gttgtacggt tacgacgata
     2761 acggcaaacc gctggataaa cagaaattcc gcattttcga tcactggggc aattttgagt
     2821 atcacgagct gcataccgaa gaggcggaag tcacagcgac aaaatcgctt gcgcaaaaac
     2881 gcttcgaagc gtgggttatg ctgggggccg ctgcgcagcg taaattcgac aaacaggcgg
     2941 tggatttagt tgctcaccag cttcgcgagc aaatcaacgc actggatgaa aagtcgattg
     3001 ccgtacagga aaaatggcag cagaaagcgc agtacagtga tgaaaaggtg ctgcgccagc
     3061 tttctccgaa aacacagcag gatctgctat ctgttctggc cccgttgatg cagtggctgg
     3121 acgtgcgcgg gcaaagcgat gccatacgct ttgatatgga tattctggcg gcgcaaactg
     3181 cccgttatac caacccggaa gagctggatg ttctctggcc gatcatcgtc gaaaaagtgg
     3241 agcgcctgcc gccgcatttg gcgcaggtgc agcaacaggg acaacgaatc aatcagcttc
     3301 gtaatttaag ctggtggaag caggccagcc tggaagagct ggaggatatt cgcattcatt
     3361 tgcgcggtat catgcacctg atggaaaaag acgcgacgcc taaatttggt tcgatacagg
     3421 tggatattac cgaagatgcg aacctgatcc agacggagac ccgcaaaact aatatccgct
     3481 cgattgattt caaactctat cgccagcagg ttcagggggc gctggagccg ctgttccagc
     3541 aaaacccggt tctgaagaaa atccgcaacg gcgagccagt cacgcaaaac gagctggatg
     3601 agctggcgaa gctggtgctg atccagaacc ccaacgttga tattcgtgcg ttgaaagagt
     3661 tttatccgca ggcaaccgcc agcctggata aacttttgcg taccatcatc gggatggaca
     3721 gcgacgcggt ggaagtgcgt tttgcccagt tcgccgctga taacagcctg accagccaac
     3781 aactgcgctt cctgtcattg ctgaaaaacc acattcgcga ttacggcacc attgaaatgc
     3841 ggcagctctt tgaacagcct tttacgcata tccacaacga aggcgttacc ggtgtgttcc
     3901 ctgatatagc gcaaatcgcc cgcctgcaaa agatagtcga agagctgggt gttgtgaccg
     3961 acgcagcgac ggtataatac acgcatgaca agccccggca gcggggcttt tgtatttaaa
     4021 acaggatata aacgctaaca atgattactg gcgacttaaa aagtaaaatc gacggactat
     4081 gggaagattt ctgggtgggt ggtatcacca acccgctgac cgtaatcgaa cagatcacct
     4141 atctgatgta ttcccggatg ctggataccc aggaacaacg cgacgaaaag cgtaaacaaa
     4201 tcgcgggtat tgattttaaa ccgcgttttg cgccagaaca gcaggagttc cgtttcagtc
     4261 actatagcaa ccttggctcg gatgagatga tggaagtggt gcgcgatggc gtattccagc
     4321 atttccgtca gctcggccag gccgatgctt cgaaggtgac gctgctgggc aactttatga
     4381 aagatgctcg tctggagatt gttaagccgt cattgctgac caaagcggtt gaggtaatca
     4441 aaaacctgcc attggatcgc ggcgacacca aaggcgacct ttacgaatac ctgttaagca
     4501 agctgacaac tgccggaatc aacggacagt tccgcacacc gcgccacatt atccgcacga
     4561 tggttgaaat gatggagccg aacccggccc gcggcgagac gatttgcgat cccgcctgtg
     4621 gcaccggtgg ttttctggca accagctatg aatatctgct ggagaagtac agctcgctgg
     4681 aatccattca tactgagatt ggcaccaacg aacgtggcga gctggaagag caaaaaatct
     4741 ttaccggcga tctgctgaca ccgtggcgta accatgtgga taacaacatg ttccacggtt
     4801 acgactttga caccacaatg ctacgtatcg ccgccatgaa cctgattatg cacggcgtgg
     4861 atgcgcctga tatccactat caggacacaa tgagccagag tttcagcaca aacttcccgc
     4921 aggccagtaa aaacgccttc aacctgattc tggcgaaccc gccgtttacc ggttcactgg
     4981 acgaggaaga tatcgactcc acgctgtcgg caatggtgaa aaccaaaaaa accgaactac
     5041 tgttcctggc gcgtattctg caaatgctga aagtgggcgg gcgcagtgcc actatcgtgc
     5101 cgcagggcgt gctgtttggc tctagcaagg cgcaccagtc acttcgcaaa acgctggtgg
     5161 aagataacca actggaaacg gtgatcaatc tgccttctgg tgtatttaaa ccttacgctg
     5221 gcgtggcgac ggcgatcctg atctttacca aaggcggtca aacggatgag gtctggttct
     5281 acgatctaca aaatgacggc tacagcctgg atgataagcg caacccgata aaagacaacg
     5341 atctgccgca tctgctggca agctggaagc attaccgtac tttacgcggg ctaccggttg
     5401 ataactttat gggtaagaag ttagcctcgt tgcttaaaca gcagtacccg gaagggatta
     5461 atgctggcgt tgattttaaa gatcgcacgc aggcggcgtt tgttgtaccg aaagcggata
     5521 ttgctgcgca gaaatacgat ctatccatca accgttataa agaagtcgtg tatcaggcgg
     5581 aggaatatga agatccgaag gtgatattga agcggttaaa ggatctggaa aaagagattc
     5641 tggcggattt ggatgagctg gaggggatgc tgtgagttcg gcgatggtga agttagggga
     5701 tgttattaat gttcactacg gaaaagcatt aaaagctgat cagcgtgtat cgaatggaag
     5761 tgtccatgtg tttggtagtt caggaattgt cggcaaccac gataaaacgc tttgcagcta
     5821 tcccacgata attattggcc gcaaaggcag cgttggtgct attacctggg ctccaagcgg
     5881 aggctggatc attgatactg cttattacgt tgagatcaaa gataataata agttagatct
     5941 ccgatacttg ttttatattc tgagcggaat tgatctcact aagaaaacga ttaccacaag
     6001 tattcctgga ttaaatagag acgatctcta tgatacattt attaaattac caccttttga
     6061 agagcagaaa cgaattgtgg atcttctcga taaagctgag ggtatacgcc aaaaacgtga
     6121 gcaatccatc aaactggctg atgatttttt gcgtgctacg tttgctacaa tgtatgggaa
     6181 tcctattaca aaccccaaaa aatggcctgt ccatcttatg ggagaaatta ttgaatttaa
     6241 aggtggaaat caaccaccta aaagtgattt tatttttgaa cctaaacagg gttatattag
     6301 attagtacaa attagagatt ttaaatccga taaatatgcg acgtacattc cgcaagaaaa
     6361 agcaaaacgt attttcgaag ttgatgatgt tatgattgct cgttatgggc cacctgtgtt
     6421 tcaaatactt agaggtttat ccggcagcta caatgtagct ttaatgaaag cttcacccaa
     6481 agaaaatatt aggaaggggt ttatattcta tcttctacaa cttccggaat atcatgatgt
     6541 tgttgtaaaa aactctgaaa gaacagcagg acaaaccggt gtaaatcttg aactattaaa
     6601 caaattcaat gttcccctcc cacctatata ctatcaagat gagatattag atagattagc
     6661 tagaattgaa aaatttaaag aaaaaataga aatatcatta aatcatttag aaatacaatt
     6721 tttatcacta cagaagagat taataggttt ttaaatcctt agtatcgaaa taaacattaa
     6781 tttattatat taaattaaga tattttagga aattaaggcg tcactcttag gtaacgcctt
     6841 tttttactat ctcgccccct aagaaggtta tatcttactt aatacctgtg actatttttg
     6901 atataatcat aaatacacac taatttgcaa aaattacttg acaatacctg agtattcata
     6961 gcttcatcta tatatttttt caatattttg agaagctctc ccatatcgcg cttgattaat
     7021 ccaggctcca tataaggcat cattcttaaa aagaaactga aatcataagc aagatataac
     7081 tcattgaccc ccaccttgac ctcaggaacg gtttcagagc gtcgtttatc ccatccttga
     7141 gactgaaaac taataggagt gatatttaat cgtgataaaa cgccacctga gagttctgtt
     7201 tcattaatta tactcccatc aggattaatt aatttagcgt gatttaagaa gtgaaaaata
     7261 ggaatgcgcg cattgccttt gcatatattt ggcaaaacat cattaacaac acatccccaa
     7321 tcataatatc cattttcaaa tacaacctct cggatgagat ctacacgctc cagtccaacc
     7381 aatcctttag ttgccatcga ttccgatttt tttaccatcg aaatagcacc atatcccaca
     7441 acaaactcag ttgtactgac cccttcttca attttctctg aatccctcac atataatttt
     7501 cctttcggat catcagttaa gaccaactca taaagttcat cttttatcat tcggaataaa
     7561 tgtgctggaa tccttttttt agtttcactc agcacctcaa atatttcttt ataggatggt
     7621 gcctgaacat attttaccg
//
LOCUS       DADKRT010000189         7627 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.192, whole genome shotgun sequence.
ACCESSION   DADKRT010000189 DADKRT010000000
VERSION     DADKRT010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7627
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.192"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..314)
                     /locus_tag="JQ356_003598"
     CDS             complement(<1..314)
                     /locus_tag="JQ356_003598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HAY4623570.1"
                     /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV
                     VFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDK
                     VL"
     gene            complement(308..1546)
                     /locus_tag="JQ356_003599"
     CDS             complement(308..1546)
                     /locus_tag="JQ356_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY4623571.1"
                     /translation="MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
                     GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQ
                     RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPG
                     GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVG
                     LSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVTMDVASTLKVLG
                     CQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELT
                     MAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTMVYAV
                     KTGKEAAEAIHHYLEGACSC"
     gene            complement(1943..2182)
                     /locus_tag="JQ356_003600"
     CDS             complement(1943..2182)
                     /locus_tag="JQ356_003600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HAY4623572.1"
                     /translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
                     VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR"
     gene            complement(2185..2904)
                     /gene="sanA"
                     /locus_tag="JQ356_003601"
     CDS             complement(2185..2904)
                     /gene="sanA"
                     /locus_tag="JQ356_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HAY4623573.1"
                     /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
                     AQGYPAVTPEQLLELQKKQGK"
     gene            complement(3054..3938)
                     /gene="cdd"
                     /locus_tag="JQ356_003602"
     CDS             complement(3054..3938)
                     /gene="cdd"
                     /locus_tag="JQ356_003602"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HAY4623574.1"
                     /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
                     TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
                     AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
                     LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
                     DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT
                     SATLKALGCHSIDRVLLA"
     gene            complement(4068..4763)
                     /locus_tag="JQ356_003603"
     CDS             complement(4068..4763)
                     /locus_tag="JQ356_003603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HAY4623575.1"
                     /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
                     LMLTGISYGSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
                     MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
                     APFLFPIILAVMG"
     gene            complement(4760..5158)
                     /locus_tag="JQ356_003604"
     CDS             complement(4760..5158)
                     /locus_tag="JQ356_003604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HAY4623576.1"
                     /translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
                     STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
     gene            5397..6347
                     /gene="dusC"
                     /locus_tag="JQ356_003605"
     CDS             5397..6347
                     /gene="dusC"
                     /locus_tag="JQ356_003605"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HAY4623577.1"
                     /translation="MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVK
                     VFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKT
                     VNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA
                     GATELVVHGRTKEQGYRAEHIDWQAIGEIRQRLNIPVIANGEIWDWQSAQQCMAISGC
                     DAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQW
                     LSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIDKLR"
     gene            complement(6734..6817)
                     /gene="yohP"
                     /locus_tag="JQ356_003606"
     CDS             complement(6734..6817)
                     /gene="yohP"
                     /locus_tag="JQ356_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohP"
                     /protein_id="HAY4623578.1"
                     /translation="MKIILWAVLIIFLIGLLVVTGVFKMIF"
     gene            6951..>7627
                     /locus_tag="JQ356_003607"
     CDS             6951..>7627
                     /locus_tag="JQ356_003607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HAY4623579.1"
                     /translation="MLLMYCHAKLKNISQHTVISAHRFLPDYSPMNRDSFYPAIACFP
                     LLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWLEYHDNQLTSLIN
                     NALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFALND
                     PAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSV
                     ARLYWEW"
BASE COUNT         1968 a         1962 c         1908 g         1789 t
ORIGIN      
        1 atcaatactt tgtccgggta atcttctttc agccgacgca gggcggccag attctcctcc
       61 agcggatgct cggcaatctg ctccatattt ttgaagccga taaaaccggt atcttctttc
      121 accagatgat caaaacgcgg cgagacttcg ttggcgataa aaaagccgat cgttttaaac
      181 accacaccgc cccaacctgt gtcgtaggct ttggcacaca tctcatagca gttgcctacc
      241 ggcgaagaag agaggcagaa cgggttggga aacttcacgc cgcaaaaagt aatcgaaaga
      301 tctttcgtta acatgagcaa gctccctcta aatagtgatg aatcgcctcg gcggcttctt
      361 tcccggtttt cacggcatag accatggttt tgtcaccctc aacaatatcg ccagcagcaa
      421 agacttgcgg gtcgcgggtc tggtaatttt gtgttttgat ggtgttacgc tgcggctcta
      481 actccgcaaa ggcatctagt ctggcatgct gaccgacggc gagaataatt ttatctgccg
      541 ccatcgtcag ttcgcccgat aaccgtacat gcttaaacgt gactttattg ccttccacgg
      601 ctactggcgt gaatccatcg atgatcgaaa cgcccagctc ccgggcgctg gtaaactctt
      661 tttcgcttgc cggaaactca tctaactctt cacgcgctac gcaagttacc gcctgacagc
      721 cgagaacttt cagcgtgctg gctacgtcca tcgtgacatc accgccgccg ataattaatg
      781 cgctttgtgg aatgctgata tcgccttgcg cctgtcgtgc acgttgcaag aagtcgacgg
      841 caatctcaac gtcactatgc tcaaacagcg gtagcccgga accgcttgat aaccccacgg
      901 tgaccagtac cgcgcggttt tctgctttca gctgctcaag ggtgagtgtg ttaccgactt
      961 cgttgttgca cttaatggtc acgcccattt tttcaatacg ggcgatctct gcatccagta
     1021 ctgattgcgg taaccggaat tgcggaatgc cgttacgcaa ccagccaccg ggttgtgctt
     1081 ctttctcata gatcgtgacg tcataaccct ggtttgtcag tgtcacactg gcctgcaatc
     1141 cggcaggacc tgcgccaata atcgcgactt tgccgagcgt tttagtaccg ggctgataaa
     1201 tttccatccc ggtttgttgt tcaaaatcag taacaaaacg ctgtaagcgg ccgatatcaa
     1261 tgggagcatc aacaccggca cgggtacaac cgctttggca taatttctcc gtcgggcaca
     1321 ctctggcaca aacggcaccg agggcattat tttcgcgaat tgtctcggca gcgcctttaa
     1381 aattacgaaa gtagattgag cgaataaatt tccccggatc ggtctgtgcc gggcaagcct
     1441 gactacaggg agcgtcgtga cataataaac agcgagaggc ttctttaatc gccagtaacg
     1501 gcgtaaaagc cggagtgagt tcatccagat aattttgttg cggcatgtga tcttccttaa
     1561 tgctatgagt aattaaggcg aacgctaaat atactcgtca tacttcaagt tgcatgtgct
     1621 gcgtctgcgg gttattcggc ccatccatgg gcctcacccc ttatggggcc gctgcaggca
     1681 gcgttcaaat ccgctccatg cggatttgtc gctcacccca gtcacttact tatgtaagct
     1741 cctggggact cactcacttg tcgccttcct gcaactcgaa ttatttagag tataaatatt
     1801 gcgtgctgat attaaggcta tgcgcgtggg gaaatttata ctgtgaaagg attcacaaat
     1861 agctgcggtt cagaatgtta tatccgcagc ttattgagtg aagtaataat tattctcaat
     1921 aattaacaga aaagagaaaa tattaacgat agaaaataag ataaacaatc atgccgatag
     1981 ataaaattcc gaagccgata tatgccacca tataagcgaa aaagagtccg ggattttttg
     2041 ctcgccagac atacaccggt tccggtgcat ttttaacccg tttatcaatc gcgcctgcgc
     2101 gccagccttt ccatgcttcg cggaaacaaa atatcggaat aaggaaaaaa acggcaacga
     2161 caaaaaactg ctgtacatcc ataactactt tccttgtttc ttttgtaatt caagtaactg
     2221 ttcgggtgtg acggcgggat acccctgcgc atcttccggc acctggtgca tagccggaat
     2281 agggaccagc ggccctaaaa aacgcggttc acgtttaaaa atataaaggt cagccagcgc
     2341 accgaaacgg gcggcaaatt cgcgaatacg tactgacagc atatctttcg gtgacggtac
     2401 ggcataacac tgagcctgaa tccccatatg cagcgcaata aataatgccc gctcacagtg
     2461 gaaacgttgg gtgataataa tgaaatcatt agtatcgaaa actttgcgtg tacgcacgat
     2521 ggaatccagc gtacgaaagc ctgcgtaatc gagaacaata tctgatgggt cgacaccagc
     2581 agcgattaaa tctttgcgca tggtcatcgg ctcattataa ctttgcaatg cgttatcgcc
     2641 gctcagtaat agataattta ccttaccgct gttataggca ttaatcgctc cttgaatgcg
     2701 gtagcgataa tactgattaa ttacgccagt acgataatat tttgctgttc cgagcaccac
     2761 accgacctgg cggtagggga gatcctgcaa ttcgtcgtag atataaggcg cggttttcca
     2821 gctcatccag cgatcgaggc cgagcacagt caacaacagc aagccgatca ggactaacag
     2881 gctgaggaac acgcgcttta acatgcagga gactcgatct aaggaaaatt tccatcaggc
     2941 tactttaccc gctggttttg cgcaagaaac ggcaaactgt ttgccgggaa tttcgacacc
     3001 aggagagggc tggcaagccg gacaaggcgt tcacgccgca tccggcacca ggcttaagcg
     3061 agaagcactc ggtcgatact gtgacagccg agagctttca gcgttgcgga ggtggcatcc
     3121 cactgaatca acggcgcatc ggctttttct gccagaaccg cgcgctggat atccgggtaa
     3181 tcataaccct tgagattcaa cagaattaac gctccctgca acggtggcag agtcgggttg
     3241 aatgcggcgt tttcagcgta gctgccactg aaaatacgac cgtctttaca ttccagcgcg
     3301 acaccgcttg gcgacttact gtaaggcatg tgcgaacggt ttgccgctgc aatcgccgcc
     3361 tgagaaagcg catcaccagt cagcgcatag ccgtgatcct gctcgtccat cagcagcgtt
     3421 ttaatctcca gatctttcgg cccaaaggca tccggcagat agtcacgcag cgcgtgtgcc
     3481 tcgcggcccg gcagatgaat acgcagatcc agaccgctgt tcagttcatt cataaactga
     3541 cggcagtgac cacaaggcgt gtagttaacg gtgatggctg caagcgcttt ttcaccactc
     3601 aaccaggcgt ggctgatcgc gctttgttcg gcatgaacgg tttgctgcat tgtcgcacca
     3661 ataaattcca tattggcacc gaaataccag gttccgctca caccgcgcgc aattgcgcca
     3721 acattaaaat tcgacaatgg cgtacgcgca caggccgctg ccagcggaag tagtgcgaat
     3781 gccagcgcgt cttcgtccag ccccgttgcg ctcttcagcg atgagacttg ctccccggtc
     3841 aacaaagcgg ggaagtactt gtctgccaga ataggttcca gtgcagattg caagttatcc
     3901 gcaagttggg caaaagcggt ttgaaaacgt ggatgcatgg cgttgcctca taatcatgta
     3961 atgggataac agtttacgaa cccgttatgg ctttatatgt gatctgaatc tcattaatta
     4021 tgcaacgcgt gaaacttaca tcaaaaatgc gcgacgcatc gcaaatttta gcccattact
     4081 gccagaataa tcgggaaaag gaacggtgcg atcagcgaag taattatccc gcataacacc
     4141 agcgctagcg aactaaatgc accttcctga taatccagct cggcgcagcg cgccgtaccg
     4201 agggcgtgcg aggcagtccc cattgccaga ccgcgcgcag ctttggtacg aatacgcatc
     4261 gcattaagca atgtatggcc aaataccgcg ccgaggatgc cgacgaaaat cacgcaaact
     4321 gcgctgattg ccggaatacc gccaatactg ccgccaaccg ccattgcaat aggcgtggtg
     4381 actgatttcg gcaggattga cgcggcgatt tccggtgaag cgcccatcaa caatgccacg
     4441 gaagtccccg tcaccatcgc aaccacgctg ccgataaaac agatggtgat gatcgatttc
     4501 cagcgcgcgc ggatctggtg tagctgctca tataaaggat aggccagcgc gacgaccgcc
     4561 ggttgcagca gatcgtttag cacttcgcta cctttaaagt agctgccgta agagatgccg
     4621 gtcagcatta aaaaagggat gatcaccacc attgctacca gcaacgggtt aagcaaggga
     4681 aacttatacc gtgccgccag tttgcgggcg gcaaaaaaga cgatcaatgt cagtggtaat
     4741 gaccaccaga tattagccat cattcttctg atcctttctg acctacgact ttacgttcac
     4801 cgtgcaccag ttgcgaactc cagctcacca ccagaaaaac caccagtgta ctgacagcac
     4861 aggaaaccac taccgggcca aactgtgcgc ggagcaaatc aaaatattgc atgacgccta
     4921 cgccaatcgg cacaaacaat agcgccatat agcgaatcag tacgtagcac cccggattga
     4981 cccattttgc cggaagaatt tgcaaggcca gcaggacaaa caggatcagc atcccgatga
     5041 tgctgcccgg aatggttacc ggtagcaggg aagcaataaa aatgcctgca tacaggcagg
     5101 cataaatcag gacgaaagcg cgtaaatatt gccagataat gttcagtgtc ttactcataa
     5161 tcaacacccc agatgagatg aattcatcat acaattaatt cgtaaaacgt gctaccgatc
     5221 acattaagaa atcagcgctt attttttcgc tccccggcat tacgcaatgc gcaacgaact
     5281 caggcataca tcaagcatag agagggatta cagtttgcag caatccctct ttgcagacct
     5341 ttaatccgtt gaccataggc gctaacatag cgcctcattt ttttgcgggt gaagatatgc
     5401 gtgtgttact ggctccgatg gagggtgtgc ttgactctct ggtgcgtgaa ttgctgaccg
     5461 aagttaacga ctacgatctg tgcatcaccg agtttgtccg cgtggtggat caactgctgc
     5521 cggtaaaagt ttttcatcgc atttgccctg agctacaaaa cgccagccgg acaccatccg
     5581 gtacgctggt gcgcgtgcag ttgttgggtc agttcccaca atggctggca gagaatgccg
     5641 cccgtgcggt ggaattaggt tcctggggcg tggatctcaa ttgcggctgc ccgtcgaaaa
     5701 cggtcaacgg tagcggtggt ggggcgacgt tactcaaaga tcctgaactc atctaccagg
     5761 gtgcaaaagc gatgcgtgaa gctgtaccgg cgcatttgcc cgtcagcgtg aaagtgcgtc
     5821 tgggctggga cagcggtgag aagaaatttg aaatcgccga tgcggttcaa caggctggtg
     5881 ctacggagct ggtggtgcat ggacggacaa aagagcaggg ttaccgcgcg gagcatattg
     5941 actggcaggc gattggcgag attcgccagc ggctgaatat tccggtgatt gccaacggtg
     6001 aaatctggga ctggcagagt gcgcaacaat gtatggcgat cagcggctgc gacgcagtga
     6061 tgattggtcg cggggcgctc aatattccca acctgagccg ggtggtaaaa tataacgaac
     6121 cgcgaatgcc gtggccggag gtggttgctt tgctgcaaaa atatacccgt ctggaaaagc
     6181 agggcgatac cgggttatat cacgttgcgc ggattaaaca gtggttgagt tatttgcgta
     6241 aagaatacga tgaagcaacg gaattatttc agcatgttcg ggtgttgaat aattcccctg
     6301 atattgcaag ggctattcag gcaattgata tcgataagct gcgataatag tggaatcgca
     6361 gtttatcaga gacaatgaat cgcttattca gcttcatcat cttgttgcgc tcctttcatg
     6421 agctaagcca catattgcca ctggcgcaag gagcgcgcag ggggaggaca atcgcctcct
     6481 ccccctgccc cctgggctct ggcgaacaaa atcgccgctg cgcggtacct tcagcttatc
     6541 cccttcggct accgggtcgg gcgcgaggta acgtccttgt aagacgcgcc ctcagcccac
     6601 atccatgtgg gctgccccgg ccttcgggga acgcttcagc gattttgacg ccaccaacac
     6661 cggagctgtt tgcaaatcaa gtacacaaaa tatctagttc ctgacctgac aacttatatg
     6721 ccatatctga tttttaaaat atcatcttaa atacgccagt caccaccagt agcccaatca
     6781 ggaaaataat caatacagcc cagagtataa ttttcattgg cgttccttta tttgtgagtg
     6841 ttgaataagt ataggaaaaa acgaagccct ttgccgttat ccataaacga ttaagataaa
     6901 tcggaagata tcattcactt agtctatatt tttctgggta tgtcgtttta ttgctactga
     6961 tgtattgcca cgcgaaacta aaaaatatat cgcaacacac ggtaatctcc gcgcaccgtt
     7021 tcttacctga ttattccccc atgaatcgtg attcctttta tccagccatc gcctgttttc
     7081 cgctgttatt gatgctggcc gggtgtgcgc ctatgcatga aacccgccag gcgttaagcc
     7141 agcaaacgcc cgctgcacaa gttgacaccg cattacccac ggcgctgaaa aatggttggc
     7201 cagacagcca atggtggctg gagtatcacg ataatcagct cacttcatta attaacaatg
     7261 cactacagaa cgcaccggat atgcaggtgg ctgaacagcg cattcagcta gctgaagccc
     7321 aggcgaaggc agttgccact caggatggtc cgcagatcga cttttcggcg gatatggagc
     7381 ggcaaaaaat gtcggcagaa ggcttaatgg ggccgtttgc tctgaacgat ccggccgcag
     7441 gtacgaccgg cccgtggtac accaacggta cttttggctt aacggcgggc tggcatctcg
     7501 atatctgggg aaagaatcgg gcggaggtta ctgcccgcct gggtacggtt aaagcacggg
     7561 cggcggaacg cgagcaaacc cgccaattgc tggctggcag cgtagcccgc ctgtactggg
     7621 agtggca
//
LOCUS       DADKRT010000190         7548 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.193, whole genome shotgun sequence.
ACCESSION   DADKRT010000190 DADKRT010000000
VERSION     DADKRT010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7548
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.193"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(214..1752)
                     /gene="lnt"
                     /locus_tag="JQ356_003608"
     CDS             complement(214..1752)
                     /gene="lnt"
                     /locus_tag="JQ356_003608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HAY4623580.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
                     QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS
                     LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
                     KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
                     EKTIQVSMVQGDIPQSLKWDGDQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
                     QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSVNGIELTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
                     ARKR"
     gene            complement(1777..2655)
                     /gene="corC"
                     /locus_tag="JQ356_003609"
     CDS             complement(1777..2655)
                     /gene="corC"
                     /locus_tag="JQ356_003609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308723.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HAY4623581.1"
                     /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
                     SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVKIPDDSPQPKLDE"
     gene            complement(2745..3212)
                     /gene="ybeY"
                     /locus_tag="JQ356_003610"
     CDS             complement(2745..3212)
                     /gene="ybeY"
                     /locus_tag="JQ356_003610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014169133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HAY4623582.1"
                     /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR
                     VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
                     PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE"
     gene            complement(3209..4288)
                     /locus_tag="JQ356_003611"
     CDS             complement(3209..4288)
                     /locus_tag="JQ356_003611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HAY4623583.1"
                     /translation="MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQ
                     LERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLTI
                     KEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
                     KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFE
                     MLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNS
                     KAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYE
                     AWEEAEQKRKAALAAERKREEQEQK"
     gene            complement(4402..5826)
                     /gene="miaB"
                     /locus_tag="JQ356_003612"
     CDS             complement(4402..5826)
                     /gene="miaB"
                     /locus_tag="JQ356_003612"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HAY4623584.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGSTGSF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPSETTEDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENDLGVGYYQP"
     gene            5972..7147
                     /gene="ubiF"
                     /locus_tag="JQ356_003613"
     CDS             5972..7147
                     /gene="ubiF"
                     /locus_tag="JQ356_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706550.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
                     hydroxylase"
                     /protein_id="HAY4623585.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVA
                     DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL
                     PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRDNDLQELELKGGETIRAKL
                     VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
                     FDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
                     QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
                     QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
     gene            complement(7301..7375)
                     /locus_tag="JQ356_003614"
     tRNA            complement(7301..7375)
                     /locus_tag="JQ356_003614"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7341..7343),aa:Gln,seq:ctg)
     gene            complement(7413..7487)
                     /locus_tag="JQ356_003615"
     tRNA            complement(7413..7487)
                     /locus_tag="JQ356_003615"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7453..7455),aa:Gln,seq:ctg)
BASE COUNT         1729 a         1998 c         2047 g         1774 t
ORIGIN      
        1 ttcagcggat ggtagaaaaa tatttgtcat ggcgaagaac gggttgatcc aaatggacag
       61 gacgcgctcg cttgatccgc aggcaattat tcgtcatccc caatatggca atgtggcttg
      121 tatccctgaa ccgtaagaaa aaggggcatg ataaccatgc cccaaagctc aatgagaaag
      181 tacgttttgc tcatgcagga tacatcaggc acatcaacgt ttacgtgctc gcagactcat
      241 caacacagcg gcaaaaccaa acagtgccgt cagcacccac agtggccagt tgccggtacg
      301 tgcatacggt gtgagtccgg tggtcggtgt cacattagtg gttaacacct cgcgggtgaa
      361 ctgcgggatc atcgcctgaa tctcaccctg cgggccaatc accgccgtaa tgccgttgtt
      421 ggtgctgcgc aacagtgggc gcgccagctc cagcgcacgc attcgcgcca tctggaagtg
      481 ttgccatgga ccaatagatt taccaaacca cgcatcgttg gagatagtca gcagatagtc
      541 ggtatccggg cggaagttat cgcgcacttg ctcgccgaga atgatctcgt agcaaatagc
      601 cgcagtaagc tcaataccat ttactgacag cggcggctgg atatatggcc cacggctgaa
      661 cgacgacatc ggcagatcaa agaacggtgc taacggacgc agaatcgact ccagcgggac
      721 aaactcgcca aacggcacca gatggttttt gttatagcga tcggctgatt cgtagctgta
      781 cggtgcacct ttacccagtg tgatgatggt gttgtaggta tcgtagcggt tctgcttatt
      841 gagacgcgcg tcgacaatcc cggttaccag cgagctacct ttatcgcgca actcaccgtc
      901 cagtgctttg aggaacggtt gctgattaat ttccagatcg gttatcgccg actccggcca
      961 gataatcaac gatgatttgc ccatcagcgg agccgttgcg ttgtagtaaa tcttcagcgt
     1021 attaagaagc tgatctccat cccatttcag tgattgcgga atatcgccct gaaccatcga
     1081 aacctgaatg gttttctccg gttgcggggt aaaccattgg atgtaacgca gcgggaaggg
     1141 tagggcaaac agcacgacgg ccaccaccag cggacgccag ttgcgtttga ccaacgccag
     1201 tgccagcagg ccactaacca tcatcagcag gaagttaatg gcttccacgc ccattatcgg
     1261 tgccagccct tttaacgggc catcaatctg gctatagccg aactgtaacc acgggaagcc
     1321 tgtcagtacc caaccgcgca gaaactcggt cacttgccag agagcagggg cggcaatcgc
     1381 cacgcgcagc caggtggttt tcggccacag acgcgacagc acgccagcaa acagtccggt
     1441 atacagcgac aaatacgccg ccagcagcac caccaggaag atgttaaccg ggccaggcat
     1501 tccgccaaag gtcgcgatgc tgacatagac ccagttaata ccgctgccaa agaggccaaa
     1561 tccccagcaa aagccaatag cggcagactg gagtggacgg cggttaaagg tcaacgcctg
     1621 aagccccatc aacgaaataa tcgccgcagg ccagacgtcg taaggagaga aggccagcgt
     1681 tccgcaggca ccgaataata acgccagcag caggcgaatg cgctggcgtt caattaatga
     1741 ggcaaaagcc atgtagttat ctatccagtt tcggttttat tcatccagct tcggctgggg
     1801 tgagtcatcc gggattttga catgaacctg aataatacgt cgactgtcgg ccatcgccac
     1861 tttgaactgg taaccgtcga tgtcgatagt ttcgccacgc gccggaagat gcccaaacgc
     1921 ctgcatcacc agaccaccga tagtgtcgac ttcttcatcg ctaaagtggg tgccgaacgc
     1981 ttcgttgaag tcttcaatgg aagccagtgc gcgcacggtc caggtatgac gactcagctg
     2041 acggaagtcg atatcatctt cttcgtcata ttcgtcttca atctcaccaa caatcagttc
     2101 caggatgtct tcaatggtca ccagaccgga aaccccaccg aattcgtcaa tgacgatcgc
     2161 catgtggtaa cgctgagagc gaaactcttt cagcatccgg tctacgcgct tactttcagg
     2221 aacgacaacc gcctgacgta acactttgtc catgctgaag gcttcagcat cgctgcgcat
     2281 aaacggcagc aagtctttcg ccatcagaat cccttcaatg tgatctttgt cttcgctaat
     2341 caccgggaaa cgtgagtggg cggactcgat gatgacatca aggcattcgt ccagcgtctg
     2401 gttgcgtttc agggtaatca tctgggagcg ggggatcatg atgtcgcgaa cgcgttggtc
     2461 tgcgatgtcc atcacccctt cgagcatatc gcgcgtatct tcgtcgataa ggtcgttctg
     2521 cccggaatca cggatcagcg ccagcagttc gtcacggttt ttcggttcac cgtggaaaag
     2581 ttggctgagt aacagggaga aaaatccctt cttgttgctt atagtgtcac tactgtgtga
     2641 attgtcgtcg ctcatggcgt cgtatgggtt ctcatgttag ttaatcaaaa cgccgtcgtt
     2701 aatcaccaac ggcggggacg tctgccagtc aaatgcctgg caaattattc tttctcggca
     2761 atgtacggat cctcatagcc cagagcaagc ataatctctg tttcgagggc ttccatttct
     2821 tctgcttcgt catcttcgat gtgatcgtaa cctaacaaat gcagactgcc gtgcaccacc
     2881 atatgcgccc agtgcgcctc cagtggtttg ccttgctcct gagcttcctt ctcaaccacc
     2941 tgacggcaga taaccagatc gcccagtagc gacatttcca tgccaggcgg cacttcaaac
     3001 gggaaggaga gcacgttggt cggcttatcc ttaccgcgat aggtcagatt cagactgtgg
     3061 ctttcggcgg tatcgaccac gcgaatagtc acttccgatt cttcctgaaa ctgcgggatc
     3121 accgcattca gccatgtttg aaactggctc tcttccggta acccggaatt atcttcacat
     3181 gccagttgta aatcgaggat cacctgactc atttttgttc ctgttcttcg cgcttgcgtt
     3241 ctgccgccag cgccgctttt cgtttttgtt cggcttcttc ccaagcttca taggcgttaa
     3301 cgatacgcgc caccacaggg tgacgaacca cgtcttcgct gtggaagaag ttaaagctga
     3361 tctcttcgac atcggccagt acttcgatgg cgtgacgtaa gcctgattta gtattacgcg
     3421 gcaggtcgat ctgtgtgacg tcgccggtga taaccgcttt tgagttaaaa ccgatacggg
     3481 tcaggaacat cttcatctgt tcgatggtgg tgttctggct ctcatcgaga atgataaacg
     3541 cgtcgttcag cgtacgacca cgcatatagg ccagcggcgc gacttcaata acgttgcgct
     3601 caatcagttt ctcaactttc tcaaagccca gcatttcaaa cagcgcgtcg tacagtgggc
     3661 gcagatacgg gtctactttc tggcttaaat cgccaggcag gaagcccagt ttctcaccgg
     3721 cttcgaccgc cggacgagtc agcagaatac ggcgaatctc ctgacgctcc agggcatcaa
     3781 ctgccgcagc cactgccagg taggttttac ccgtacccgc cgggccaacg ccgaaggtaa
     3841 tgtcatggtc gagaatattg gcgatgtact gcgcctggtt tggcgtgcgc ggcttaatta
     3901 cgccgcgttt ggttttgata ttgaccgctt tgccgtactc cggcacgctc tccgcacttt
     3961 gctccagtac tcgcgcttct ttaatcgtaa ggtggatctg ttccggttcg atatcctgaa
     4021 tctgaccgcg catcggggct gtatcgacat acaggctacg cagaatgtct gccgcagcgg
     4081 tgacgcaaat cggacggccg gtcagtttaa agtggttgtc gcggcgattg atctcgatgc
     4141 cgagacggcg ttcgagctgc ttgatgttgt catcaaacgg gccgcacagg ctcaacagac
     4201 gcgcgttgtc tgctggctcc agggtgattt cgcgagtgtc tatgttcaaa ccgttcctct
     4261 tatctgtatg ccgccggaag ctgaacattc accggcctat aaggaaatta ttcacgccac
     4321 aggaaaaagg cgcaagcatt gcgataaaga tggggataaa gagagaaaaa acaaggccca
     4381 ccggaacggc gggcctgaga attacggctg ataataaccc acgccaaggt cgttttcttt
     4441 gcgggtacgg gcaatcaccg attccggtgt ttctgccacg cgcaggccca tttcatcttc
     4501 agtacgcacc actttaccgc gcagagagtt cgggtagacg tcggtaattt ctacatcgac
     4561 gaatttaccg atcatatccg gtgtgccctc gaagttgacc acgcggttat tttcggtacg
     4621 cccggaaagc tccatgatgc tcttacgcga agtcccttct accagaatac gctgggtggt
     4681 gccgagcatc cggcggctcc atgccatcgc ttgctgattg atacgttctt gcagaatata
     4741 cagacgctgc ttcttctctt cttccggaac atcatcaacc atatcggcgg ctggtgtacc
     4801 cggacgtgca gagaagataa agctgtagct catgtcgaaa ttgacgtcgg caatcagctt
     4861 catcgttttc tcgaagtctt cggtggtttc gctagggaag ccaacgatga aatcagaact
     4921 gatctgaata tctggacgcg ccgcacgcag tttacggatg atcgctttgt actccagtgc
     4981 cgtatgagta cggcccatca ggttcagaat gcgatcggaa ccgctctgta ccggcagatg
     5041 caggaagctc accagctccg gcgtgtcgcg atacacttcg atgatatcgt cggtgaattc
     5101 gatcggatgg ctggtggtaa agcgaatacg atcgatcccg tcgatcgcag caaccagacg
     5161 cagcagatcg gcaaacgatc cggtggagcc gtcgtagttt tcaccacgcc aggcgttcac
     5221 gttctgaccg agcaggttga cttcacgcac gccctgagcc gcaagctggg caatctcaaa
     5281 cagaatatcg tcagacggac ggcttacctc ttcaccacgg gtgtaaggca ccacgcagta
     5341 ggtgcaatat ttattgcagc cttccatgat ggagacaaac gcggtcggcc cttcggcgcg
     5401 cggttccggt agacggtcaa acttctcgat ttccgggaag ctgatatcta caaccgggct
     5461 gcggtcgccg cgcacggagt tgatcatctc cggcagacgg tgcagcgttt gcggcccaaa
     5521 aataatatcg acatagtggg cgcgctggcg aatgtgctcg ccttcttgcg atgccacgca
     5581 gccaccgacg ccgataatca ggtctggatt cttctctttt aacagtttcc agcgacccaa
     5641 ctgatggaag actttttcct gagccttctc gcggattgag caggtgttca gcagcagcac
     5701 atccgcttct tccgccacgt cggtcagttg atagccgtgg gtggcatcca gcagatcggc
     5761 catcttcgat gaatcgtact cgttcatctg acagccccag gttttaatat ggagtttttt
     5821 ggtcatcgac ttgctcttgc gaaatagtag ccaggaatgc agggcgcata gtgtaatgct
     5881 ttgctgccgt tgtggccagt atgagcgtta tcagcccttg ggggtaaaaa tcctgtaaac
     5941 ttaaagcata ttgctaacag gatgattgac catgacaaat caaccaacgg aaattgccat
     6001 tgtcggcgga ggaatggtcg gcggcgcgct ggcgctgggg ctggcacagc acggattttc
     6061 ggtaacggtg atcgagcacg cagaacctgc accgtttgtc gctgatagcc aaccggacgt
     6121 gcggatctcg gcgatcagcg ccgcatcggt atcattgctt aaagggttag gggtctggga
     6181 tgcagtacag gctatgcgtt gccatcctta ccgcagactg gaaacgtggg agtgggaaac
     6241 ggcgcatgtg gtgtttgacg ccgctgaact taagctaccg ttgcttggct atatggtgga
     6301 aaacaccgtc ctgcaacagg cgctgtggca ggcgctggaa gcgcatccga aagtaacgtt
     6361 acgtgtgcca ggctcgctga ttgcattaca tcgagataat gatcttcagg agctggaact
     6421 gaagggcggt gaaacgatcc gcgcgaaact ggtgattggt gccgacggcg caaattctca
     6481 ggtgcggcag atggcgggaa ttggcgttca tgcctggcag tatgcgcagt cgtgcatgtt
     6541 gattagcgta cagtgtgaga acgatcccgg cgacagcacc tggcagcaat ttaccccgga
     6601 cggaccgcgt gcgtttctgc cgttgtttga taactgggca tcgctggtgt ggtatgactc
     6661 tccggcgcgt attcgccagt tgcagaatat gaatatggcg caactccagg cggaaatcgc
     6721 gaagcatttc ccgtcgcgtc tgggttacgt tacaccgctt gccgctggtg cgtttccgct
     6781 gacgcgccga catgcgttgc agtatgtgca gccggggctt gcgctggtgg gcgatgccgc
     6841 gcataccatc catccgctgg cggggcaggg ggtgaatctt ggttatcgtg atgtcgatgc
     6901 cctgattgat gttctggtga atgcccgcag ttacggtgaa gcgtgggcca gttatcctgt
     6961 cctcaagcgt taccagatgc ggcgcatggc ggataacttc attatgcaaa gtggtatgga
     7021 tctgttttat gccggattca gtaataatct gccgccgctg cgttttgtgc gtaatctcgg
     7081 gttaatggcg gcagagcgtg ctggcgtgtt gaaacgtcag gcgctgaaat atgcgttagg
     7141 gttgtagcct tacaacattg ccggatgcgt gccaaccgta ggtcggataa gacgcggcag
     7201 cgtcgcatcc gacattgaag gataagacgt gtcaacatcg cattcgacat tgaatgaacg
     7261 cagaaaagca aaaagctcgc cgaagcgagc ttttttaatg tggctggggt acgaggattc
     7321 gaacctcgga atgccggaat cagaatccgg tgccttaccg cttggcgata ccccaactgg
     7381 gtgcacttac gatgtaagcg tcttgaataa attggctggg gtacgagggt tcgaacctcg
     7441 gaatgccgga atcagaatcc ggtgccttac cgcttggcga taccccaaca aattggtttt
     7501 tgaatttgcc gaacgtattc gacacattca gaatttggtg gctacgac
//
LOCUS       DADKRT010000191         7472 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.194, whole genome shotgun sequence.
ACCESSION   DADKRT010000191 DADKRT010000000
VERSION     DADKRT010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7472
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.194"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..339
                     /locus_tag="JQ356_003616"
     CDS             <1..339
                     /locus_tag="JQ356_003616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY4623586.1"
                     /translation="QTEAFLNAYGLSRFAPLGYDPRDLPIRDLAGYRKKGNHDGDPII
                     FYTFPAAFEQEIAKGFNTKQFAEVLKNAGMLTPPTSGRGYQGRVREDGRQIRVYVLNF
                     MAEESSQPEE"
     gene            714..1148
                     /locus_tag="JQ356_003617"
     CDS             714..1148
                     /locus_tag="JQ356_003617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000126714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY4623587.1"
                     /translation="MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGE
                     STFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQWTGQDGGTQQGYQVVADSVISA
                     RTVRPGGKAGQRGQATDALRRAQQPSRDEYDQRPPFDDETPF"
     gene            1159..1800
                     /locus_tag="JQ356_003618"
     CDS             1159..1800
                     /locus_tag="JQ356_003618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623588.1"
                     /translation="MSTQPIIIEFGSYRWPRHLAIHEADHAIAAWFFGIQEVEIALSG
                     NNRVAKTYLSGDVDECGAVAVWHANYPRNVAEVKSYTLSNDDTRLRLIDQVCRAMVIS
                     LAGIVAQSRYTGDDINALMETSGKADMKNVRDLSEVYRVAGGEDADIQRISLSRAEAL
                     IALKWWDVIALAKILENRNHMPASNFQRIMGDIDKPVPKPMTLAELDELVGEE"
     gene            1797..2147
                     /locus_tag="JQ356_003619"
     CDS             1797..2147
                     /locus_tag="JQ356_003619"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623589.1"
                     /translation="MKPYILAAGLISSAPALSAIHCGGFTIQPDRYRTTINGDVVHIV
                     DAQFYGAPRDFSQAAIKLLPDAITTTDRQYRIETQGGNALLELMTRENPPRVLNRERC
                     DAGLTSFGWYTSAP"
     gene            2841..3452
                     /locus_tag="JQ356_003620"
     CDS             2841..3452
                     /locus_tag="JQ356_003620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001205651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623590.1"
                     /translation="MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGT
                     LYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWYACPHCMKRAAKLYIGKKDIGCR
                     ACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD
                     RKRAELSVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL"
     gene            3684..3869
                     /locus_tag="JQ356_003621"
     CDS             3684..3869
                     /locus_tag="JQ356_003621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623591.1"
                     /translation="MTPREIALLTIAKLEHGGHQLTQADQREIERSVNADIARRDRFR
                     EMMRAPAYQWKKPAPRR"
     gene            3990..4532
                     /locus_tag="JQ356_003622"
     CDS             3990..4532
                     /locus_tag="JQ356_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
                     /protein_id="HAY4623592.1"
                     /translation="MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEH
                     LYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAALQNDGDKLVYTYDFGDWWDCVI
                     VLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
                     DIERRVYDLSSINDRLQTLN"
     gene            complement(4525..4884)
                     /locus_tag="JQ356_003623"
     CDS             complement(4525..4884)
                     /locus_tag="JQ356_003623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004202368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623593.1"
                     /translation="MRMTSRKKEILSYFEPDNLEWVTGEIGAPPFDVSGVAYLLHGMV
                     SFDKRHQLESTRRTLESMVAGGLLERVTVYESRQIRRGGETNATVVRYGLPGQCAVMR
                     DTGGADNAISGEYMRVS"
     gene            5318..6142
                     /gene="dinD"
                     /locus_tag="JQ356_003624"
     CDS             5318..6142
                     /gene="dinD"
                     /locus_tag="JQ356_003624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HAY4623594.1"
                     /translation="MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLA
                     RATQACEASNQAASDHFVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVI
                     AAGQTYFAIQTRRQELADDEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAI
                     DFAIFQNHGYRGLYGGLDQKAIHQRKGLKKNQNILDHMGSTELAANLFRATQTEEKLK
                     RDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK"
     gene            6434..7051
                     /locus_tag="JQ356_003625"
     CDS             6434..7051
                     /locus_tag="JQ356_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HAY4623595.1"
                     /translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
                     IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
                     IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
     gene            complement(7048..7472)
                     /gene="ligB"
                     /locus_tag="JQ356_003626"
                     /gene_synonym="yicF"
                     /pseudo
     CDS             complement(7048..7472)
                     /gene="ligB"
                     /locus_tag="JQ356_003626"
                     /gene_synonym="yicF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312549.2"
                     /note="this ligase is similar to LigA but it lacks the
                     C-terminal BRCT domain; catalyzes strand joining of nicked
                     DNA in the presence of a divalent cation and NAD+;
                     internal stop; incomplete; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
BASE COUNT         1999 a         1834 c         1907 g         1732 t
ORIGIN      
        1 cagacggagg cgtttttgaa tgcctatggg ctgagtcgat tcgcgccgct gggttatgac
       61 ccgcgcgatt tacccatccg tgatttagcc gggtacagga agaaggggaa ccacgacggc
      121 gacccgataa ttttctacac cttcccggca gcgtttgagc aggagattgc aaagggcttc
      181 aataccaaac agtttgccga agttctaaag aatgcaggaa tgcttacacc accaacgagc
      241 gggcgaggct atcaggggcg agtaagggag gatgggcgac agattcgcgt ctatgtactc
      301 aatttcatgg cagaggaaag cagccagcca gaagaataat tatttcttca catgcgtagt
      361 tttagtgttg tctcggttgt ctttgttgtc tcaatttgta attaagattg atttataagg
      421 attttatttt aatttctgag acaacaccga gacaacattt agccattttg agacaacagg
      481 gcgaaagtgt gtttttagtc tggcaggcag tgagacaaca tttatgccgg gtgagacaac
      541 acgaaattgc aaatgttgtc tcagcaaaac ccagacgtgg cgcggcctgt agagccgtga
      601 gacaacaaag acaacagaga caacactatt tttgcttact atgaaaaaaa atcggcaggt
      661 gtcccacatt aagaaatcgt cattagcaaa actaataatc cagtgagggg aaaatgacag
      721 cacaaatttc agcatacggg cggctggtgg cagatcccca gacccgcacc acaacgaacg
      781 gtaacaacat ggctatggcg cggctggcgg tgtctctccc ctgtaatgcg gcagaggcgg
      841 gagagtcaac cttctggctg ggcgttattg cttttgggaa gcaggccgat gcgctggcaa
      901 agcaccagaa aggcgacctt gtgagcgtgg caggcaatat gcaactcaac cagtggacag
      961 ggcaggacgg cggtacacag caggggtatc aggtagtagc cgacagtgtg atcagcgcca
     1021 gaacggtacg ccccggcggg aaggcaggac agcggggaca ggcaacggac gcgctgagac
     1081 gtgcgcagca gccatcccgt gatgaatacg accaacgccc accattcgac gatgaaacgc
     1141 cattctgaga gggaagatat gagtacgcaa cccatcatta ttgagttcgg cagctatcgc
     1201 tggcccagac atcttgcaat acatgaagca gatcatgcga tagccgcatg gtttttcggc
     1261 atacaggagg tagaaattgc gttatcgggt aataaccgag tggcaaaaac ctaccttagc
     1321 ggcgatgttg atgaatgtgg agctgtcgcg gtatggcacg ccaactatcc acggaatgtg
     1381 gctgaggtta agtcttacac cctctcgaat gatgacacca ggttacgtct gatagaccag
     1441 gtatgccggg ctatggttat ctctctggct ggtatcgtcg cgcaatcacg ctatacgggg
     1501 gatgatatta acgcactgat ggaaacgtcc gggaaagcag acatgaaaaa tgttcgtgat
     1561 ttatcagagg tataccgggt ggctggtggg gaggatgctg atatacagag aatatccctt
     1621 tcccgtgctg aggcgctgat tgccctgaaa tggtgggatg ttatcgcgct ggcgaaaata
     1681 ctggagaacc gtaaccatat gcctgccagc aacttccagc gcattatggg tgatattgac
     1741 aagcctgtac caaagcctat gacgctggct gaactggatg aattggtggg tgaagaatga
     1801 agccatacat tctggcagcc ggcctgatct cctcggcacc ggcactatct gctatccatt
     1861 gtgggggctt taccatacag ccagaccgtt atcggacaac gattaacggc gatgtggttc
     1921 atattgttga tgcgcaattt tacggcgcac cgcgagactt tagccaggcc gccataaagt
     1981 tattgccgga tgccattacc actaccgata ggcaataccg catagagacg cagggaggca
     2041 atgccttgct tgagttgatg accagagaaa acccgccacg tgtgcttaat cgtgagcgct
     2101 gcgatgccgg gttaacaagt ttcggttggt acacttctgc gccgtgatgt tcgttccgag
     2161 cgcagcctaa aatattggac tgttcttgac ggatttaaaa ctctaatgga gccaagtcct
     2221 tgccagtagc gggctaggag cctaattgtg attcaggtcg tcaaaaatat tcaggtttgc
     2281 ggcattggtt cgcagtacgc agtccggtac gcggcaaaac tgcgcattta acgtgcgtac
     2341 cacctgacga attctaacgc cggcattgca aacagatgcg tgcgcaaaat ggctaagacg
     2401 tctgatattg ctggctttgg ctcaatcagt ttggaggtgg cggtatcagt acgatgctaa
     2461 tttttgctaa ggttttagta cgcaactcag gtacgcactc tcaccagata cgaaaccgat
     2521 tcgcagttgc gtaccagcct gtaaggcgca ttatcgctgg gtttctacag tcgaatgcag
     2581 tacgcaaagt ggaaaatcct ccgaatacga aacccgagca ttgcgcagta aattgcgaat
     2641 tgcgcagtta acaaaatatc tccgcaaaac gaaacggata tcaatgcgca aaccatcctc
     2701 aacccccgcg cggttactgg ctttattgat gtgaaattgc aaaattggtg cgcaatttac
     2761 agtaaaatac gcatattatt tcgtattcaa tttgcgcacc gttcgcagtt aatgcgcagt
     2821 aattcgcagg aggccagcca gtgagagaca gaacgcgcag ctataccacc gacctgcccc
     2881 gtatagggtt gccattcctt gcgaacatgc gtagcaggct ggcggatgct gaaccgggta
     2941 cgcagcttta tacccagacc gaaagcggaa cgttgtatgc cttccggcaa gccgacagct
     3001 acgccatgac aatcaacggc gtgacgcggg ctattcgcac cacaaccacg aaggccgggt
     3061 atggcgtccg ggaatggtac gcttgccccc actgtatgaa gcgggctgca aagctgtata
     3121 tcggcaagaa agacattggc tgccgggcgt gctggaaact tcactataaa agccagagtg
     3181 ccgacatact ggacaggatg cgcatgaaga tacgccagca gcgatgcgcg atatggggca
     3241 gcaatgacct tgccaataat ctgtttaatg acattcgcat gttcccaaaa ccaaagggga
     3301 tgcgctgggc tacgtttgac aggaagcggg cagagttatc agttatggag atggcttact
     3361 ggcaggcatt cagcccggta gtggacagaa tcacgggcgt tattgagcgt aaagcaggaa
     3421 aagcagccag aggcattggc ctgactctat aaaagcaaaa cgcccgcacg gggcgtcaga
     3481 gaacgggata gacttctgcg acaatttgca ttcgccgcca atatagcaag ccgtccacat
     3541 caagcaataa actatcaccg ggagggggag gccaaatctc tgcaatcctg agccttaagg
     3601 actgcccgcc ccatcgtttt ttcatacccg cgaaaaatga aatttaatcc gggcgtgttt
     3661 catccttcca gagggtatga cgtatgacac cacgcgaaat agccttattg accatcgcca
     3721 aacttgagca tggaggccac cagcttacac aggcagatca acgggagata gaacgctcag
     3781 ttaatgccga tatagcccgg cgcgacaggt tccgcgaaat gatgcgagca cctgcctacc
     3841 agtggaagaa gccagcgccg cgcaggtaga tacgggatta ttccgcatgt aacttatgcg
     3901 tattaagcaa atttccttta ttcaccttta cagaattgtg agtacgtcag tatcgttatc
     3961 cttccgattc gcatttattc aggatttgca tgtaccagct aaagataacc atccgagaca
     4021 gcaaaccacc tatatggcgg cgtgtgctgg ttccagagca aatccccttt agtgaacttc
     4081 acgcggtgat ccagttggct tttggctgga atgacgaaca cctgtatatg ttcgagaaag
     4141 ggcgtaaagg tgatcccggt agcgagtatc gcgtatgggg tgaggatgaa agcatgggta
     4201 atgcggcaat cacaccacta tgggcagcgc tccagaatga tggtgacaag ctggtttaca
     4261 cgtatgactt tggcgactgg tgggattgcg tcattgtgct ggagaagcaa acacacgata
     4321 cgagcaatca gcccattagc tgcctgcgtg ggaaaggcac caccccggtg gaaaactcag
     4381 gcggcttgca tggttacaat gaattgctat tacaggccag agagtctgat aatcctgagc
     4441 aggccgagat ccacaatttc ctgatgctgg atattgagcg ccgggtttac gacctgagca
     4501 gcatcaacga cagattgcag actcttaact gacccgcata tattcgcctg atattgcgtt
     4561 atcagcgccg ccagtatcgc gcataacagc gcactgaccg ggcaaaccgt agcgcacgac
     4621 cgttgcgtta gtctcaccgc cgcgccgtat ctggcgcgat tcatacactg tcacccgctc
     4681 aagcagtcca ccagcaacca tgctttccag tgtgcgccgg gttgattcga gctggtgacg
     4741 cttatcgaac gacaccatgc catgaagcag gtaggccaca cccgacacat cgaacggcgg
     4801 cgcaccaatc tcaccagtca cccattcgag gttatccggt tcaaagtagc taagtatctc
     4861 ttttttgcgg ctggtcattc tcatagctgg caggttcctt attgtgggat agcactatca
     4921 tacaataagg cgcaaaagat aagaggccag aacagcaagc atgagagcat aaaacgagca
     4981 gccaaagaca gcgcctcaaa ataccgtgta cacaagggtg tacctactga gaaaacgcat
     5041 tacaagaaac acagcaacca cgggcgttta aagccactac tcaataaaca gattcaactc
     5101 gtaacgccaa ttcttacttt tcagccttca caaatgccgc ccactcaaac agagcggcat
     5161 ttttcttccc cgcaacttca attctgtttt gcgtgcctgc tccagatttt gcgatgtttt
     5221 tttgcccagc acactgagaa cgtgagatac tcacaactgt atataaatac agttacagat
     5281 ttactttctt tgcaatcgat atcacatgga gtgggcaatg aacgaacatc atcaaccttt
     5341 tgaagaaata cggcattatg gcactgaagg gcaagaattt tggtcagcta gagaattggc
     5401 accgttactg gattatcggg actggcgcaa ttttcaaaag gtactggccc gcgcgactca
     5461 agcgtgcgaa gccagcaatc aagctgcatc tgaccatttc gttgaaacca ccaaaatggt
     5521 tgtattaggt tcaggggctc aacgagaact tgaagatgtt catctctccc gctatgcctg
     5581 ttacctggta gtacaaaacg gcgaccctgc gaaaccggtt attgcggcag ggcaaactta
     5641 ttttgctatc cagacccgac ggcaggagct ggctgacgat gaagctttca ggcaacttcg
     5701 tgaagacgaa aagcgtcttt ttctgagaaa tgaattgaaa gaacataaca aacaattggt
     5761 tgaggcagcg cagcaagctg gggtagcgac agctatcgat ttcgccatat ttcagaatca
     5821 tggttaccgg gggctgtatg gtggattaga tcagaaagct attcatcagc ggaaggggct
     5881 gaaaaagaat cagaatatcc tggatcatat gggttcaaca gaactggcgg ctaatctctt
     5941 tcgagctacc caaacagaag aaaaactcaa gcgggatggc gtgaattcaa aacagcaagc
     6001 aaacaccaca cactttgacg tgggtcgcaa ggtgaggcaa accattcagg aacttggcgg
     6061 aaccatgcct gaggagttgc cgaccccgca ggtcagcatc aagcagttgg aaaacagtgt
     6121 aaaaattaca gagaagaaat agcagaaact aaaaactctt tttcttaatt gagatacccg
     6181 atgcgtaagc caaagtccag gtgcagtgaa cacaatggct aaacattgca cctttctttt
     6241 ccacccctca attttaacct attttttctt atgcattttc tcagacaaga actcagaata
     6301 atgcatctac gctacagaaa atagcgattt cacataacta caagttatca atttcctctt
     6361 accttaaaaa atctcaatcg tgacaatgcg cacaaatcgc taccctgcca gacagatttt
     6421 tagggagaga accatgctgt tacacatttt gtatttggtt ggcatcactg ccgaagccat
     6481 gacgggggcg ctggcggccg gacgacggcg catggataca tttggcgtaa ttattattgc
     6541 gaccgccacc gcaattggcg gagggtcagt gcgcgatatt ctgctgggcc actatccgct
     6601 cggctgggtc aaacacccgg aatatgtgat tatcgtcgct accgccgcag tactcaccac
     6661 tatcgttgct cctgtaatgc cttacctgcg caaagtgttt ctggtgctcg atgcgctcgg
     6721 actggtggtc ttttctatca tcggcgcaca ggttgcactg gatatggggc acggcccaat
     6781 tattgccgtt gtcgcggcgg taaccaccgg cgtgtttggc ggcgttttgc gcgatatgtt
     6841 ctgtaaacgc atcccactgg tattccagaa agagttgtat gctggtgtct catttgcctc
     6901 cgccgtgctg tacatcgcgc tgcaacacta tgtttctaac catgatgtgg tgattatctc
     6961 caccctggta ttcggctttt ttgcccgctt actggcgcta cgtcttaagc tgggattacc
     7021 ggtcttttac tacagccacg aaggtcacta aggttcaaaa cctgtgatct gctgggcagc
     7081 cagccaactg cccagcttct tgatttgcgc attttccttc cattcaataa cctgtctggc
     7141 gcgcccagat ccagtccccg gcagctgctg tcagaactgc tccgtgctaa ataaaagttg
     7201 cgactaggac cgttcatcac tggcattaag cgccgcccgg gttagcggta ttcccattgc
     7261 catcacccag cgagtaaaag gctgcttacg agccagatta aactgatgcc ataactgcgc
     7321 acttttactt ttcgcgatcc ccggcgtgtt ctgtaattgc tctggcgtta ataaaagcca
     7381 agaaaagata tgctcaaagc gatgagtctg atgcagcgcg cgccaaccgg cctcaccaat
     7441 gctatccagc ccaagaacct gttttgaccc ca
//
LOCUS       DADKRT010000192         7447 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.195, whole genome shotgun sequence.
ACCESSION   DADKRT010000192 DADKRT010000000
VERSION     DADKRT010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7447
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.195"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..1458
                     /locus_tag="JQ356_003627"
                     /pseudo
     CDS             1..1458
                     /locus_tag="JQ356_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            1469..2542
                     /locus_tag="JQ356_003628"
     CDS             1469..2542
                     /locus_tag="JQ356_003628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4623596.1"
                     /translation="MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSG
                     YLITANENKVGTTFNTTVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHS
                     NINYYDLNPNLDVGIAIDILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKA
                     IVYFYIKKTFAGKLIIPETKIVTLYGTISRDTPVDYSQPMADVYIRGDITAPQSCEIN
                     NLQPVYFDFKEIPAADFSSVVGSAVITHKITKTVTIECENLGILNTDDISTSFYATEP
                     NTDNSMVVTSNSNVGIKIYDKNNKEIKVNGGELPTDMGKSTVYGEKSGSVTFSAAPAS
                     LTGARPAPGQFTATATITVEIVR"
     gene            2790..3830
                     /gene="pstS"
                     /locus_tag="JQ356_003629"
     CDS             2790..3830
                     /gene="pstS"
                     /locus_tag="JQ356_003629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HAY4623597.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGY
                     VEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWP
                     ITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWK
                     TNIKDSSGKPLY"
     gene            3917..4876
                     /gene="pstC"
                     /locus_tag="JQ356_003630"
     CDS             3917..4876
                     /gene="pstC"
                     /locus_tag="JQ356_003630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HAY4623598.1"
                     /translation="MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            4876..5766
                     /gene="pstA"
                     /locus_tag="JQ356_003631"
     CDS             4876..5766
                     /gene="pstA"
                     /locus_tag="JQ356_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HAY4623599.1"
                     /translation="MAMVEIQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGI
                     MAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKNKHG"
     gene            5857..6630
                     /gene="pstB"
                     /locus_tag="JQ356_003632"
     CDS             5857..6630
                     /gene="pstB"
                     /locus_tag="JQ356_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HAY4623600.1"
                     /translation="MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            6645..7370
                     /gene="phoU"
                     /locus_tag="JQ356_003633"
     CDS             6645..7370
                     /gene="phoU"
                     /locus_tag="JQ356_003633"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HAY4623601.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVK
                     GQDFRHVGGDELDKLLAGKDSDK"
BASE COUNT         1871 a         1722 c         1944 g         1910 t
ORIGIN      
        1 agatgttgat gtcagcgtgg gtgaattgcg cgatgaagac ggatttacac cggacgtcct
       61 tcaggcgcaa atacttcatg gtttttccca cgggatcact ttatatggag gtatgcaggc
      121 tgctgaaaat tatggttctg cagctctggg tgtcggtaaa gatcttggcg ctttgggcgc
      181 aatttctttc gatgtgacac atgctcgtgc gaattttagc catgatgata cagaaacggg
      241 tcagtcatat cgctttctct attcaaaacg atttgacgac acagacacta gcttgcgcct
      301 ggttggctat cgttactcca ccgagggcta ctataccctc aatgagtggg catcgcggcg
      361 caacagccct gaagactttt gggaaacagg taaccgacgt agtcgcgtgg agggaacgct
      421 aacgcagtcg ttggggagag attatggcaa tttatacctg acattaagcc ggcaacaata
      481 ctggcatacc gatgatgtcg aacgattaat gcaatttggc tacagcagta gctggaagcg
      541 tctctcgtgg aacgtctcct ggagttattc caatactgcc agacagggga cggggaacaa
      601 ccatgccagt gataacacca gtgagcagat ctacatgctc tctttatctg ttcctttatc
      661 gggctggtgg ggtaatagtt acgccaccta ttctgtttcg caaaacgata attccggtag
      721 ctcacatcaa gcggtacggc gctggaaaga aataaccttt catggaattt aatgcagtcc
      781 tataacagtc atgatgatga ggttggcggt aatatgtccc tgacctatga tggctcttat
      841 ggcacggtga acggcagcta taactacagc caaaattccc agaggctgaa ttatggtatc
      901 agagggggaa ttctggcaca cagcgaaggg gtaacgttaa gtcaggagtt aggtgaaact
      961 attgctcttg ttaaagcacc tggggccgcc gggttagaaa tagataatat gcgcggtgct
     1021 gcgacggact ggcgcggcta tacggtcaag acacagctaa acccttatga tgaaaatcgg
     1081 gtagcaatca gcgataacta tttctcgaag tcgaatatag aacttgataa taccgtcgtt
     1141 acgatggttc ccacgcgtgg tgcagtggtt aaagcggagt ttgtgactca tgtgggttat
     1201 cgcgttctct tcagagtgtt aaatgcaaat ggtaaaccgg taccttttgg agccattgct
     1261 gcgatacaag atgcaagttt ggcagattca ggaattgtcg gtgaccgtgg cgaactttat
     1321 ctttctggtc taccagaaaa aggacaggtt acgttatcct ggggagaaaa cgcctcaaca
     1381 aaatgcatct tcaattattc actttcgaca ccagaaagtg agagcggatt aattgaacag
     1441 ggtgtgacat gtcattaaaa ggatttttat gaacaagtat atcaaacagt ggtgctttgc
     1501 tgtgtttatg ctctcgttaa gtagtgtagc acttgcagct cctaaaggta tctgtacccc
     1561 tgataatggc gtatttcaca gtacgcttga tttctcggga tatcttatta ccgcgaacga
     1621 aaataaggtt ggaacgacat ttaacaccac tgtaactaat ggatcctcat atcctggacg
     1681 ctgtcattgt gatactggta acgtaggaga attcccctat atctattata cgtcaaaaat
     1741 aaaccaggca ttaacttatg ctggggttca ctctaatatt aattattatg atcttaatcc
     1801 gaaccttgat gttgggattg ctatagatat tcttggggtt gggtatgtga atgcaccttt
     1861 tgaatatcat gctaacaacc cgtctggtaa tacaaagtac aattgcaacc gcattgaacc
     1921 tttaagtata tctagtgggg ctaaagcgat agtatatttt tatatcaaga agacatttgc
     1981 aggaaaattg attattcctg aaacaaagat agtgacattg tatggaacaa ttagccgtga
     2041 caccccggtg gattactcac agccgatggc tgatgtttat attcggggcg atattacagc
     2101 tccgcaaagt tgcgaaataa ataatttaca gccagtttat tttgatttta aagaaatacc
     2161 agctgcagat ttttcatctg ttgttggaag tgcggtaata acacataaaa ttactaaaac
     2221 ggtcactatt gagtgtgaaa acctggggat actgaatacc gatgatatca gtacgtcttt
     2281 ttatgctacc gaacccaata cggacaattc aatggtcgta acttcaaact ctaacgtggg
     2341 gataaaaatt tacgacaaaa ataataagga aatcaaagtg aacggtggtg agttgccaac
     2401 agacatgggt aaatcaacag tgtatggtga aaaatcaggt agtgtaactt tttcagctgc
     2461 tcctgcgagc cttactggag ctcgcccagc cccggggcaa tttactgcaa cagcgacgat
     2521 aactgttgag attgtgcgct aataggtctg acaacgattg ttcatcacat cgttgtcatc
     2581 tcacccattt ctttatcact tttaaatgca tcatgacaaa aagatgacat gtgggatttt
     2641 catcttcaca tttaaaatca gtaagttatt tggtaattcc tttctgtcat aaaaatgtca
     2701 tattccttac atataactgt cacctgtttg tcctattttg cttctcgtag ccaacaaaca
     2761 atgctttatg aatcctccca ggagacatta tgaaagttat gcgtaccacc gtcgcaactg
     2821 ttgtcgccgc gaccttatcg atgagcgctt tctctgtgtt tgcagaagca agcctgacag
     2881 gtgcaggtgc aaccttccct gcgccggtgt atgccaaatg ggctgacact taccagaaag
     2941 aaaccggtaa taaagttaac taccagggta tcggttcttc cggtggcgta aaacagatta
     3001 tcgctaatac cgttgatttt ggtgcctctg acgcgccgct gtctgacgaa aaactggctc
     3061 aggaaggtct gttccagttc ccgaccgtga ttggcggcgt ggtgctggcg gttaacattc
     3121 cagggctgaa gtctggcgaa ctggtgctgg atggtaaaac cctcggcgac atctacttgg
     3181 gcaaaatcaa gaagtgggat gatgaagcca tcgccaaact gaatccgggt ctgaaactgc
     3241 cttcacaaaa cattgctgta gtacgccgcg cagatggctc cgggacttcc ttcgtcttca
     3301 ccagctacct ggcgaaagtg aacgaagagt ggaaaaacaa cgttggtact ggctctaccg
     3361 taaaatggcc gatcggtctg ggcggtaaag gtaacgacgg tatcgccgcg ttcgttcagc
     3421 gtctgccggg tgcaattggt tatgttgaat atgcttacgc gaagcagaac aacctggcgt
     3481 acaccaaact gatctccgct gatggtaaac cggttagtcc gaccgaagaa aacttcgcta
     3541 atgcagcaaa aggtgcagac tggagcaaaa ccttcgctca ggatctgacc aaccagaaag
     3601 gcgaagatgc atggcctatt acctctacca cgttcattct gatccacaaa gatcagaaga
     3661 aaccagaaca aggcacagaa gtgctaaaat tcttcgactg ggcgtacaaa accggggcta
     3721 aacaggcgaa cgacctggat tacgccagcc tgccggatag tgtagttgaa caggttcgcg
     3781 ctgcgtggaa gaccaatatt aaagacagta gcggtaagcc gctgtactaa taaaactcca
     3841 ggccgggtac ggtgttttac gccgcatccg gcattacaaa atgactttgt aaacgcgttt
     3901 aactgaagag taacttatgg ctgcaaccaa gcctgctttt aacccaccgg gtaaaaaggg
     3961 cgacataatt ttcagcgtgc tggtaaaact ggcggcgctg attgtgctat tgatgttggg
     4021 tggcattatt gtctctctga tcatctcctc ctggccgagc attcagaaat ttggtctggc
     4081 tttcctatgg accaaagagt gggatgcacc gaacgatatc tacggggcgc tggtgccgat
     4141 ctacggtacg ttggtgactt cgtttatcgc gctgctgatc gccgtcccgg tgagtttcgg
     4201 tatcgccctg ttcctgactg agcttgcgcc tggctggctg aaacgcccgc tgggtatcgc
     4261 cattgagctg ctggcagcca ttccaagtat cgtttacggc atgtggggcc tgtttatctt
     4321 tgcgccgctg ttcgccgttt actttcagga gccggtcggc aatatcatgt cgaatatccc
     4381 gattgttggc gcgctgttct ctggccccgc atttggtatc ggtatcctcg cggcaggcgt
     4441 gatcctcgcc atcatgatta ttccgtacat tgcggcggta atgcgtgatg tgttcgaaca
     4501 aaccccggtg atgatgaaag agtcggccta cggtattggc tgcaccacct gggaagttat
     4561 ctggcgtatc gttcttccgt tcaccaaaaa tggtgttatc ggcggcatca tgctggggct
     4621 gggccgcgcg ctcggtgaaa ccatggcggt gacctttatc atcggtaaca cctaccagct
     4681 cgacagcgcc tcgctgtaca tgccgggcaa tagtatcacc tctgcgttgg cgaacgaatt
     4741 tgcggaagcg gaatccggtc tgcacgttgc cgcactgatg gaactgggcc tgatcctgtt
     4801 tgtgattacc ttcatcgtcc tcgccgcatc gaagtttatg attatgcgcc tggctaagaa
     4861 tgagggggca cgctaatggc tatggttgaa atccaaacca ctgcggcgct ggctgaatct
     4921 cgccgcaaaa tgcaggcgcg tcgccgcctc aaaaaccgta ttgcgctgac gctctcgatg
     4981 gcgacgatgg ccttcggcct gttctggctg atctggattt taatgtccac catcactcgc
     5041 ggtatcgacg gtatgtcgct ggcgctgttc actgaaatga cgccgccgcc caatacggaa
     5101 ggtggtggtc tggcgaacgc cctggcgggt agcgggctgt taattttgtg ggccacggta
     5161 ttcggtacgc cgctgggcat tatggcgggg atttatctgg cggaatatgg tcgtaaatcc
     5221 tggctggcag aagtgattcg cttcattaac gacattctgc tctccgcgcc gtcgattgtg
     5281 gttggtctgt ttgtttacac catcgtggtg gcgcagatgg agcacttctc tggctgggcg
     5341 ggcgtgattg ccctggcgct gttgcaggtg ccgattgtta tccgcaccac cgagaacatg
     5401 ctgaaactgg tgccggacag cctgcgtgaa gcggcttatg cgctgggtac accgaagtgg
     5461 aagatgatct ctgcgattac gctgaaagcg tcggtgtccg ggatcatgac cggtatcctg
     5521 ctggcgattg cccgtattgc tggtgaaacc gcgccgctgc tgtttaccgc gctctccaac
     5581 cagttctgga gcacggacat gatgcagccg atcgccaacc tgccggtgac gatctttaag
     5641 tttgcgatga gcccgtttgc ggaatggcaa caactggcct gggccggggt attgattatt
     5701 accctgtgcg tactgctgct gaacattcta gcgcgcgttg tttttgcgaa gaataaacac
     5761 ggttaacact ttgccggatg cggcgtgaac gccttatccg gcctacggta agcctgatta
     5821 gcgaagtgca tcaggcacga tgaggaaaag attgcaatga gtatggttga aactgccccg
     5881 agtaaaattc aggttcgtaa tttgaacttc tactacggca aattccatgc cctgaaaaac
     5941 atcaacctgg atatcgctaa aaaccaggtt acggcgttta tcgggccgtc cggctgcggt
     6001 aaatcgacgc tgctgcgtac cttcaacaaa atgtttgaac tgtacccgga gcagcgtgcg
     6061 gaaggtgaaa ttctgcttga tggcgacaac atcctgacca actctcagga tatcgcactg
     6121 ctgcgtgcga aagtgggcat ggtgttccag aaaccgacgc cgtttccgat gtccatctac
     6181 gacaacatcg cttttggcgt tcgtctgttt gagaagctct cccgtgccga catggacgag
     6241 cgcgtgcagt gggcattgac caaagccgca ttgtggaacg aaaccaaaga taaattgcac
     6301 cagagcggtt actctctctc tggtggtcag caacagcgtc tgtgtattgc gcgtggtatc
     6361 gccattcgcc cggaagtgct gctgctcgac gaaccgtgtt cggcgctcga ccctatctct
     6421 accgggcgta ttgaagagct gatcaccgaa ctgaagcagg attacaccgt ggtgatcgtc
     6481 acccacaaca tgcagcaggc tgcgcgttgt tccgaccaca cggcgtttat gtacctgggc
     6541 gaattgattg agttcagcaa cacggacgat ctgttcacca agccagcgaa gaaacaaaca
     6601 gaagactaca tcaccggtcg ttacggttga ttcaggagtg cgttatggac agtctcaatc
     6661 ttaataaaca tatttccggc cagttcaacg ccgaactgga aagtatccgc acgcaggtga
     6721 tgaccatggg cggcatggtg gagcagcagc tttctgatgc aatcaccgcg atgcataacc
     6781 aggacagcga tctggcgaag cgcgtgatcg aaggcgacaa gaacgtcaac atgatggaag
     6841 tggcgatcga tgaagcctgc gtgcgcatta tcgccaaacg tcagccgacg gcgagcgacc
     6901 tgcgactggt tatggtgatc agtaaaacca ttgccgagct ggagcgtatt ggcgacgtgg
     6961 cggacaaaat ctgccgtact gcgctggaga aattctccca gcagcatcag ccgttgctgg
     7021 taagtctgga gtcgctgggc cgtcatacca tccagatgct gcacgacgtg ctggacgcgt
     7081 tcgcgcggat ggacattgac gaagcggtac gtatttatcg tgaagataaa aaagtcgatc
     7141 aggaatacga aggtattgtt cgtcaactga tgacctacat gatggaagat tcgcgtacca
     7201 ttccgagcgt acttactgcg ctgttctgcg cgcgttctat cgaacgtatt ggcgaccgct
     7261 gccagaatat ttgtgagttt atcttctact acgtgaaggg gcaggatttc cgtcatgtag
     7321 gcggtgatga gctggataaa ctgctggcgg gaaaagatag cgacaaataa ttcaccagac
     7381 aaatcccaat aacttaatta ttgggatttg tggtaatgct gccaacttac tgatttagtg
     7441 tatgatg
//
LOCUS       DADKRT010000193         7437 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.196, whole genome shotgun sequence.
ACCESSION   DADKRT010000193 DADKRT010000000
VERSION     DADKRT010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7437
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.196"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            157..765
                     /locus_tag="JQ356_003634"
     CDS             157..765
                     /locus_tag="JQ356_003634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HAY4623602.1"
                     /translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
                     PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
                     AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA"
     gene            863..2254
                     /gene="selA"
                     /locus_tag="JQ356_003635"
     CDS             863..2254
                     /gene="selA"
                     /locus_tag="JQ356_003635"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HAY4623603.1"
                     /translation="MTTETRSLYSQLPAIDRLLHDSSFLSLRDTYGHTRVVELLRQML
                     DEAREVIRDSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAE
                     AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
                     TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
                     MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
                     QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
                     LEDEQRFLEMLLK"
     gene            2251..4095
                     /gene="selB"
                     /locus_tag="JQ356_003636"
     CDS             2251..4095
                     /gene="selB"
                     /locus_tag="JQ356_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HAY4623604.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVPSFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
                     GNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREH
                     LLQLPGREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
                     RALHAQNQPTETAHAGQRIALNIAGDAEKEQINRGDWLLADAPPEPFTRVIVELQTHT
                     PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAG
                     ARVVMLNPPRRGKRKPEYLQWLASLARAQNDSEALAVHLQRGAVNLPDFAWARQLNGE
                     GMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
                     PMEDEALVLLLIEKMRESGDILSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFSDEPWW
                     VRDLAKETGTDEQAMRLTLSQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
                     TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
     gene            4285..5436
                     /gene="yiaY"
                     /locus_tag="JQ356_003637"
     CDS             4285..5436
                     /gene="yiaY"
                     /locus_tag="JQ356_003637"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine dehydrogenase"
                     /protein_id="HAY4623605.1"
                     /translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTK
                     LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
                     CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
                     MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
                     AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAYQLGGFYNLP
                     HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
                     DIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM"
     gene            5601..7139
                     /locus_tag="JQ356_003638"
     CDS             5601..7139
                     /locus_tag="JQ356_003638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY4623606.1"
                     /translation="MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQN
                     LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
                     PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
BASE COUNT         1769 a         1848 c         2079 g         1741 t
ORIGIN      
        1 aagtgagata tccatcagag tgaaataatt aggaaaatat ttatatcacc atgataaata
       61 tgtgatttat ttggaagtaa caaaccatca acattttctg ccctttttcc catcaccagg
      121 ccatactgat atttttcctc gcacaaagga ctcggcatga aactcgtcgg tagctacacc
      181 agcccgtttg tacgcaaact ttctattctg ttgttagaaa agggcataac tttcgaattt
      241 attaatgaac tgccctataa cgcggacaac ggcgtggcgc aatttaaccc gttaggaaaa
      301 gtgccggtgc tggtgaccga agagggcgaa tgctggtttg attcgccgat catcgctgaa
      361 tatattgagt taatgaatgt cgctccggcg atgttgccgc gcgatccgct ggagtcgttg
      421 cgggtgcgca aaattgaggc gctggcggat ggcattatgg atgccgggct ggtatcggtg
      481 cgtgaacagg cgcgtccggc ggcgcagcag tctgaagatg aattgttacg ccagcgggag
      541 aaaatcaacc gcagtctgga tgtgctggaa ggatatctgg tcgatggcac actcaaaacc
      601 gatacggtca atctggcgac tatcgccatt gcctgtgctg tcggatatct caatttccgc
      661 cgcgttgcgc caggttggtg tgtcgaccgc ccacacttag tcaaactggt cgaaaacctg
      721 tttagccgcg aaagttttgc tcgcaccgaa ccgccaaagg cttgatgcgc gatatgtcct
      781 cctgacccat ctcacgttac aatccgtggt tatgttaaac gcccttctcc atgtgagagg
      841 gccttgatta gccaggtttc ctatgacaac cgaaacgcgt tccctctata gtcaacttcc
      901 ggctattgat cgcttattgc acgatagctc cttcctttct ttgcgtgata cttatggtca
      961 cacccgcgtg gtggaattgt tgcgtcagat gctcgacgaa gcgcgagaag tgattcgtga
     1021 cagccagacg cttcctgcgt ggtgtgaaaa ctgggcgcaa gaagtcgatg cccggttgac
     1081 gaaagaggcg cagagcgcgc tgcgtccggt gatcaacctg acgggaaccg tgctgcatac
     1141 caaccttgga cgagctttac aggcggaagc cgcggtggaa gccgttgcgc aggctatgcg
     1201 ttcgccagtg accctcgagt acgatctgga cgacgctgga cgcggacatc gcgatcgggc
     1261 gctggcgcaa ctgctgtgcc gtattacggg ggcggaagat gcctgtatcg tcaataacaa
     1321 tgcggcggcg gtgttattga tgttggcggc cactgccagc gggaaagagg tggtagtatc
     1381 tcgcggcgaa ttggtggaga ttggcggcgc gtttcgtatt cccgatgtta tgcgtcaggc
     1441 aggctgcacc ctacacgaag tagggaccac caaccgcacg cacgcgaatg attatcgtca
     1501 ggcggtgaat gaaaataccg cactgttgat gaaagtacat accagtaact acagcattca
     1561 ggggttcacc aaagcgatag atgaagcgga actggtggcg ctcggcaaag agctggatgt
     1621 tcccgtagtg actgatttag gcagtggctc gctggtcgat cttagccagt acggtttgcc
     1681 gaaagagcca atgccgcagg agttgattgc ggcgggcgtc agtctggtga gcttctccgg
     1741 cgacaagttg ttaggcgggc cgcaggcagg gattatcgtt ggtaaaaaag agatgatcgc
     1801 ccgcctgcaa agccacccgc tgaagcgtgc attacgcgcg gataaaatga ccctcgcggc
     1861 gctggaagcc acgttgcgtc tttatttaca ccctgaagct ctgagtgaaa aattaccgac
     1921 cctgcgcctg cttacccgca gcgcagaggt cattcaaatc caggcacaac gtttacaggc
     1981 tccccttgcc gcacattacg gcgcggagtt tgcggtacag gttatgccat gtctttcgca
     2041 gattggcagt ggttcgctgc cggttgatcg cctgccgagc gcggcattaa cgtttacacc
     2101 ccatgatgga cgcggtagcc accttgagtc attagccgcc cgctggcgtg aattgccagt
     2161 gccggtgatt ggtcgtattt atgacggacg attgtggctg gatttacgct gccttgaaga
     2221 tgagcaacgg tttttggaga tgttgttgaa atgattattg cgactgccgg acacgttgac
     2281 cacggcaaaa caaccttatt gcaggcgatt actggcgtaa atgctgaccg tctgccggaa
     2341 gaaaaaaagc gcggcatgac catcgatctc ggctatgcct actggccgca gccggatggt
     2401 cgcgtgccta gttttatcga cgtacccggt catgaaaagt ttctttccaa catgctggcg
     2461 ggcgttggtg gtatcgatca cgcgctgttg gtggtggcgt gcgatgacgg cgtgatggcg
     2521 cagacccgtg agcatctggc gattttgcag ctgaccggta acccgatgct gacagtggcg
     2581 ctgaccaagg ccgatcgcgt ggacgaagcg cgtgttgatg aggttgaacg ccaggtaaag
     2641 gaggtgctgc gggaatacgg ttttgctgag gcaaaactgt ttatcaccgc agcaaccgaa
     2701 ggtcggggaa ttgatgccct gcgcgagcat ctgcttcagt taccaggacg tgaacacgcc
     2761 agccaacata gtttccgcct cgcgatcgac cgcgcattta ccgtaaaagg tgccgggctg
     2821 gtcgtcaccg gtacggcgtt aagcggggaa gtgaaggtag gcgattcact ctggctgact
     2881 ggtgtaaata aaccgatgcg tgtacgtgcg ctgcatgcac aaaaccagcc aacagaaacc
     2941 gcccatgccg ggcagcgtat cgcgcttaac atcgcgggtg atgcggaaaa agagcagatt
     3001 aaccgtggcg actggctgct tgccgatgcg ccgccagagc cgttcacacg ggtgattgtc
     3061 gagcttcaaa cccatacacc gctgacccag tggcagccgc tgcatattca ccacgccgcc
     3121 agccacgtca cgggacgcgt ttcactgctg gaagataacc ttgctgaact ggtcttcgac
     3181 accccgttat ggctggcaga taacgaccgc ctggtattgc gcgatatctc tgcccgcaac
     3241 acgctggccg gagcgcgcgt cgtgatgctt aacccgccgc gtcgcggtaa acgtaaacca
     3301 gagtatctgc aatggctggc ttccctcgcc agggcacaga atgatagcga agcgttagcc
     3361 gttcacctgc aacgcggcgc ggttaatctt cctgatttcg cctgggcgcg ccagctcaac
     3421 ggcgaaggga tgcgcgaact gctgcaacag cctggctata ttcaggctgg ttatagcttg
     3481 ttgaatgcgc cggttgccgc tcgctggcaa cggaaaattc tcgacacatt agcgacttat
     3541 catgagcaac atcgcgatga acctgggcct gggcgcgaac gtctgcgacg tatggcgttg
     3601 ccaatggaag atgaagcgct agtactgttg ctgattgaaa agatgcgcga aagcggcgac
     3661 atcctcagtc atcacggttg gctgcatctg ccggatcaca aagcgggctt cagcgaagag
     3721 cagcaggcca tctggcaaaa agcagagccg ctgtttagtg acgagccgtg gtgggtgcgt
     3781 gatctggcaa aagagacggg taccgacgag caggcaatgc gcttgacgct aagccaggcg
     3841 gcgcagcaag gaataattac cgcgatcgtc aaagatcgtt attaccgtaa cgatcggatt
     3901 gtcgaatttg ccaatatgat ccgcgatctc gatcaggagt gtggttcaac ctgcgcggcg
     3961 gatttccgcg atcgcttagg cgtaggccga aagctggcaa ttcagattct ggaatatttt
     4021 gaccgcattg gctttacgcg tcgtcgtgga aatgatcatt tattgcgcga cgcattatta
     4081 tttccggaaa aataaggaaa tgattaatta atttttaaaa taaattaata caaatttctt
     4141 atgattttaa aaaaagcaca ttgtttaatg aatacaatgt gctttttatt agattaattt
     4201 tgataattaa taataatgat catgttttcg aatgaaaatc ctcagtaagc ttcccaccct
     4261 tttttacact ttcaggagtg tgttatggca tcttcaactt tctttattcc ttctgtgaat
     4321 gtcatcggcg ctgattcatt gactgatgca atgaatatga tggcagatta tggatttacc
     4381 cgtaccttaa ttgtcactga cagtatgtta acgaaattag gtatggcggg cgatgtgcaa
     4441 aaagcactgg aagaacgcaa tatttttagc gttatttatg atggcaccca acctaacccc
     4501 accacggaaa acgtcgccgc aggtttgaaa ttacttaaag agaataattg cgatagcgtg
     4561 atctccttag gcggtggttc tccacacgac tgcgcaaaag gtattgcgct ggtggcagcc
     4621 aatggcggcg atattcgcga ttacgaaggc gttgaccgct ctgcaaaacc gcagctgccg
     4681 atgatcgcca tcaacaccac tgcgggtacg gcctctgaaa tgacccgttt ctgcatcatc
     4741 actgacgaag cgcgtcatat caaaatggcg attgttgata aacatgtcac tccgctgctt
     4801 tctgtcaatg actcctctct gatgattggt atgccgaagt cactgaccgc cgcaacgggt
     4861 atggatgcct taacgcacgc tatcgaagca tatgtttcta ttgccgccac gccgatcact
     4921 gacgcttgtg cactgaaagc cgtgaccatg attgccgaaa acctgccgtt agccgttgaa
     4981 gatggcagta atgcgaaagc gcgtgaagca atggcttatg cccagttcct tgccggtatg
     5041 gcgttcaata atgcttctct gggttatgtt catgcgatgg cgtaccagct gggcggtttc
     5101 tacaacctgc cacacggtgt atgtaacgcc gttctgctgc cccatgttca ggtattcaac
     5161 agcaaagtcg ccgctgcacg tctgcgtgac tgtgccgctg caatgggcgt gaacgtgaca
     5221 ggtaaaaacg acgcggaagg tgctgaagcc tgcattaacg ccatccgtga actggcgaag
     5281 aaagtggata tcccggcagg cctacgcgac ctgaacgtga aagaagaaga tttcgcggtt
     5341 ctggcgacta atgccctgaa agatgcctgt ggttttacta acccgatcca ggcaactcac
     5401 gaagaaattg tggcgattta tcgcgcagcg atgtaatcat catttccaca acggctggca
     5461 aattgtcagc cgctttttca actatctctg taacccttgc ccgtaaattc gtgatagccg
     5521 tcgtaaagct gttaccgact ggcgaagatt tcgccagtca cgtctaccct tgttatacct
     5581 cacaccgcaa ggagacgatc atgaccaata atcccccttc agcacagatt aagcccggcg
     5641 agtatggttt ccccctcaag ttaaaagccc gctatgacaa ctttattggc ggcgaatggg
     5701 tagcccctgc cgatggtgag tattaccaga acctgacgcc ggtgactggg cagctgctgt
     5761 gcgaagtggc gtcttcgggc aaacgagaca tcgatctggc gctagatgct gcgcacaaag
     5821 tgaaagataa atgggcgcac acctcggtgc aggatcgcgc ggcgattctg tttaagattg
     5881 ccgatcgaat ggaacaaaac ctcgagctgt tagcgacagc tgaaacctgg gataacggca
     5941 aacccattcg cgaaaccagt gctgccgacg tgccgctggc gattgatcat tttcgctatt
     6001 tcgcctcgtg tattcgggcg caggaaggtg ggatcagtga agttgatagc gaaaccgtgg
     6061 cctatcattt ccatgaaccg ttaggcgtgg tggggcagat tatcccgtgg aacttcccgc
     6121 tgctgatggc gagctggaaa atggctcccg cgctggcggc gggcaactgt gtggtgctga
     6181 aacccgcacg tcttaccccg ctttctgtac tgctgctaat ggaaattgtc ggtgatttac
     6241 tgccgccggg cgtggtgaac gtggtcaatg gcgcaggtgg ggaaattggc gaatatctgg
     6301 cgacctcgaa acgcatcgcc aaagtagcgt ttaccggctc aacggaagtg ggccaacaaa
     6361 ttatgcaata cgcaacgcaa aacattattc cggtgacgct ggagttgggc ggtaagtcgc
     6421 caaatatctt ctttgctgat gtgatggatg aagaagatgc ctttttcgat aaagcgctgg
     6481 aaggctttgc actgtttgcc tttaaccagg gcgaagtttg cacctgtccg agtcgtgctt
     6541 tagtgcagga atctatctac gaacgcttta tggaacgcgc catccgccgt gtcgaaagca
     6601 ttcgtagcgg taacccgctc gacagcgtga cgcaaatggg cgcgcaggtt tctcacgggc
     6661 aactggaaac catcctcaac tacattgata tcggtaaaaa agagggcgct gacgtgctca
     6721 caggcgggcg gcgcaagctg ctggaaggtg aactgaaaga cggctactac ctcgaaccga
     6781 cgattctgtt tggtcagaac aatatgcggg tgttccagga ggagattttt ggcccggtgc
     6841 tggcggtgac caccttcaaa acgatggaag aagcgctgga gctggcgaac gatacgcaat
     6901 atggcctggg cgcgggcgtc tggagccgca acggtaatct ggcctataag atggggcgcg
     6961 gcatacaggc tgggcgcgtg tggaccaact gttatcacgc ttacccggca catgcggcgt
     7021 ttggtggcta caaacaatca ggtatcggtc gcgaaaccca caagatgatg ctggagcatt
     7081 accagcaaac caagtgcctg ctggtgagct actcggataa accgttgggg ctgttctgat
     7141 ataagaagct ggtcgcattg ggtattcatt gcctgatgtg acgcttacgc gtcttatcat
     7201 gcctacggga acctgaccgt aggccggata aggcgtacac gccgcatccg gcataaacaa
     7261 agcgcacgtt gttacaattt acgttttaaa cctacgtgcg caataatcca gactacgcca
     7321 acagaagtgc gtttctgggg cgtgttttgt caggagttta atctcgcgtt tcgatggtga
     7381 gcgggcgaac taggccgtaa atcaccattg gtgatccgag gccaatcagc aataaac
//
LOCUS       DADKRT010000194         7436 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.197, whole genome shotgun sequence.
ACCESSION   DADKRT010000194 DADKRT010000000
VERSION     DADKRT010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7436
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.197"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            168..275
                     /locus_tag="JQ356_003639"
     CDS             168..275
                     /locus_tag="JQ356_003639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588455.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623607.1"
                     /translation="MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG"
     gene            complement(328..1086)
                     /locus_tag="JQ356_003640"
     CDS             complement(328..1086)
                     /locus_tag="JQ356_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HAY4623608.1"
                     /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGG
                     RSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF
                     GLKVTYNVTWNSEPPESAPEHTDRRTTLSLGYSM"
     gene            1373..2302
                     /gene="pfkB"
                     /locus_tag="JQ356_003641"
     CDS             1373..2302
                     /gene="pfkB"
                     /locus_tag="JQ356_003641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HAY4623609.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
                     ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
                     QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISASQKQG
                     IRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
                     KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
     gene            2403..2693
                     /gene="ghoS"
                     /locus_tag="JQ356_003642"
     CDS             2403..2693
                     /gene="ghoS"
                     /locus_tag="JQ356_003642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HAY4623610.1"
                     /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG
                     NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK"
     gene            2799..3659
                     /locus_tag="JQ356_003643"
     CDS             2799..3659
                     /locus_tag="JQ356_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HAY4623611.1"
                     /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
                     AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA
                     QQSLDRLLAA"
     gene            complement(3700..4236)
                     /locus_tag="JQ356_003644"
     CDS             complement(3700..4236)
                     /locus_tag="JQ356_003644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623612.1"
                     /translation="MTYQQAGHIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
                     GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
                     DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
                     PVICIAAGYVFFSLLGFI"
     gene            4383..5051
                     /gene="hxpB"
                     /locus_tag="JQ356_003645"
     CDS             4383..5051
                     /gene="hxpB"
                     /locus_tag="JQ356_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HAY4623613.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN
                     ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
                     LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
                     DLLG"
     gene            5214..5792
                     /locus_tag="JQ356_003646"
     CDS             5214..5792
                     /locus_tag="JQ356_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707386.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY4623614.1"
                     /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
                     PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA
                     LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
                     WMPHSLPENSAVRWSSQIINTLQIQFHRLIKH"
     gene            5937..7328
                     /locus_tag="JQ356_003647"
     CDS             5937..7328
                     /locus_tag="JQ356_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HAY4623615.1"
                     /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFG
                     LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
                     LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA
                     VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG
                     ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA
                     ILDSEDDAELAHR"
BASE COUNT         1867 a         1809 c         1837 g         1923 t
ORIGIN      
        1 tattttcgat atatatgttg atgcataata ttattttttc ataaaacgca gaaacagtga
       61 ccaggtgtac aacgccaccc aacggctgta ataacaaaaa atcccttgat gcccgtccct
      121 tttgttacac tccgttatca cgcacaagag atatgcagga cactggaatg ccgactaaac
      181 gctttgataa aaaacactgg aagatggtgg tggtgctact ggcaatctgt ggcgctatgt
      241 tgttgctacg ttgggcagca atgatttggg gctgagcagt gacaaacgaa gacagccaga
      301 ccgcataaca cggtccggca gataatttta catgctgtag cccagcgata aggttgtccg
      361 acggtcggta tgttccggtg cagactctgg aggttcagag ttccatgtaa cgttgtaagt
      421 caccttcagt ccaaaatgtt cattaatagc aacatttaat gcgctttcgg agttcagcgt
      481 tgtgtcttcc gcgccaaaga ccgaaacacc ctgcgtaaat ttagcgttgt cagtcaactg
      541 ccatgcataa gccccggagg catagcccag cggctgagtt tcactggcat tgtcggtata
      601 tttgtcgtaa cgcacacctg gaccgaattc aaagcggaaa ctgtgtaccg ggccattcaa
      661 aaactgacga ccataacccg cggtcaacac atcgcgctct cgatagccgt tataacggtc
      721 tgtcagccag cttgcctgac caaataaata gtcataatca gttaaattaa agcggctacg
      781 cccgcccgcc gcatattttt ctgaagaacg ctcatcatta gaagaagtat tactggcgtt
      841 cccccacagc gaccaggcag tggtttgtcc ataccaggtc atggtggtgt cagccgtaag
      901 tgaggagctt ttcgtattgc ctgattgtgc aagatatcct gcgttcagat taccttcgaa
      961 aggtttttta gcgctggcag gatcgtccat gacagtaaaa acggaatcat cggcagctgc
     1021 attcagtgac gcaaacatgc cccccgccaa cataacgatg gcaggaactg tcttcaaaag
     1081 cttcatttat caagagtccg tacaacaaaa aaagagacca tcgcggtccc ggaaactttc
     1141 ttaaggatca aagattagcg tccctggaaa ggtaacgaat tataaaaagg cgcgaataac
     1201 ttagcaatgt attcttattt cattttttga ataagcatgt ggcgaaaaca gatttttatt
     1261 tatatatatt tatctgcaaa attttaaata aagctccaat aaatcatatt gttaatttct
     1321 tcactttccg ctgattcggt gccagactga aatcagccta taggaggaaa tgatggtacg
     1381 tatctatacg ttgacacttg cgccctctct cgatagcgca acaattaccc cgcaaattta
     1441 tcccgaagga aaactgcgct gtaccgcacc ggtgttcgaa cccgggggcg gcggcatcaa
     1501 cgtcgcccgc gccattgccc atcttggagg cagtgccaca gcgatcttcc cggcgggtgg
     1561 cgcgaccggc gaacacctgg tttcactgtt ggcggatgaa aatgtccccg tcgctactgt
     1621 agaagccaaa gactggaccc ggcagaattt acatgtacat gtggaagcaa gcggtgagca
     1681 gtatcgtttt gttatgccag gcgcggcatt aaatgaagat gagtttcgcc agcttgaaga
     1741 gcaagttctg gaaattgaat ccggggccat cctagtcata agcggaagcc tgccgccagg
     1801 tgtgaagctg gaaaaattaa cccaactgat ttccgcttcg caaaaacaag ggatccgctg
     1861 catcgtcgac agttctggcg aagcgttaag tgcagcactg gcaattggta acatcgagtt
     1921 ggttaagcct aaccaaaaag aactcagtgc gctggtgaat cgcgaactca cccagccgga
     1981 cgatgtccgc aaagccgcgc aggaaatcgt taatagcggc aaggccaaac gggttgtcgt
     2041 ttcccttggt ccacaaggag cgctgggtgt tgatagtgaa aactgcattc aggtggtgcc
     2101 accaccggtg aaaagccaga gtaccgttgg cgctggtgac agcatggtcg gcgcgatgac
     2161 actgaaactg gcagaaaatg cctctcttga agagatggtc cgttttggcg tagctgcggg
     2221 gagtgcagcc acactcaatc agggaacacg tctgtgctcc catgacgata cgcaaaaaat
     2281 ttacgcttac ctttcccgct aacaaaaaca ttcccccagc attgggggaa tcaccaccaa
     2341 cctgtcggca acgcgtttct ccgactatgc tcaaaagtca tgtgataaca aaggggtgaa
     2401 ctatggccag tggcgatctt gtccgttatg tcataaccgt catgttgcat gaggatacat
     2461 tgactgaaat taacgagttg aataattacc tgactcgcga cggttttttg ctcaccatga
     2521 cggatgatga gggaaatatc catgagctgg ggactaacac ttttggactt atcagtaccc
     2581 aaagtgaaga agaaattaga gaactggttt cggggcttac ccaaagtgca accggcaaag
     2641 atcctgaaat caccatcacg acctgggagg aatggaatag caacagaaaa taaatggttt
     2701 ttgggcaata atcagtctgt ggtgtgcgtt agctcgtgtt tttacaccgc attcttgcgc
     2761 taaccttatg atctggcaga caacatggga gagacatcat gtggcaggca atcagtcgtc
     2821 ttttgagcga gcagttaggt gaaggcgaaa tcgaactgcg taatgaactg cctggcggag
     2881 aagtccatgc cgcatggcat ttgcgctatg caggacatga ctttttcgtc aaatgtgatg
     2941 aaagggaact gcttcccggt tttaccgccg aagccgacca actggagtta ctgtcgcgta
     3001 gtaaaaccgt caccgtgcct aaggtttggg cagtaggcgc tgaccgtgac tacagttttc
     3061 tggtgatgga ttatctccca cctcgtccgc tggatgcgca tagcgcattt attcttggtc
     3121 agcaaattgc gcgtttacat caatggagtg accaaccaca atttggcctc gattttgata
     3181 actcgctctc cacaactcca cagcccaaca cctggcaacg tcgctggtca acgttttttg
     3241 ctgaacaacg gattggctgg cagttggaac tggcagcaga gaaagggatc gctttcggca
     3301 atatcgacgc catcgtcgag catattcagc agcgtctggc ctcgcatcaa ccgcagcctt
     3361 ctctgttgca cggcgattta tggtccggca actgtgcgct gggtccggat ggcccgtaca
     3421 ttttcgaccc tgcctgctac tggggtgacc gagagtgcga cctggcgatg ttaccgctgc
     3481 atactgaaca gccgccacaa atctatgacg gctatcagtc agtatccccg ctacctgccg
     3541 atttccttga acgtcaaccg gtttaccaac tctacacgct gttaaatcgt gcaaggttat
     3601 ttggcggtca gcatttggtt attgctcagc agtcactgga tagattatta gcagcatgat
     3661 atgggttgaa gataatggcc gctctgtgcg gccttttgat taaataaacc caagcagaga
     3721 aaagaacaca taacctgcag caatacaaat aaccggcagg atatacagtg agaaaaactg
     3781 caggaaaata gtatggtgcg gaacaacaat acgggactca atttgttcac gcgttagccc
     3841 ctcttcccct ttggcttttt ccagaatgag ttgatcttca acaccttccc gcaagaagcg
     3901 cgcctggcga ctcattcggg caccggaatc ctgcaacgcc agtccgacaa aaatcaggat
     3961 gaaaatcacc cagaacataa cgttcacgcc accattaaaa ttgggcgtcg gggagttata
     4021 ccagaacaga ttcaaaaaag gcgtattcgc ctgcatcata tcgatcatga catgagtaaa
     4081 gtcgagcatg accgcattaa tgccttcctg gttttcctgc cgggtattca taaatttcag
     4141 caaagaaatc aatgtagaga tcaatgcagg tataaaaatc acccaaccca aaatcctttt
     4201 caaaacagca atgtgtccag cttgttgata cgtcatgagt tctccttgat taagacgcgt
     4261 cgtttcactt agtttacctg tagatatctg ttttcgccca ttctttaaag gcgatatgat
     4321 aggcgcttaa tcataagcac ggcttaatac cttacacata atgctctaaa ggagaggttg
     4381 taatgtcaac cccgcgtcag attcttgctg caatttttga tatggatgga ttacttatcg
     4441 actcagaacc tttatgggat cgagccgaac tggatgtgat ggcaagcctg ggggtggata
     4501 tctcccgtcg taacgagctg ccggacacct taggtttacg catcgatatg gtggtcgatc
     4561 tttggtacgc ccggcaaccg tggaatgggc caagccgtca ggaagtagta gaacgggtta
     4621 ttgcccgtgc catttcactg gttgaagaga cacgtccatt attaccaggc gtgcgcgaag
     4681 ctgttgcgtt atgcaaagaa caaggtttat tggtgggact ggcctccgcg tcaccactac
     4741 atatgctgga aaaagtgttg accatgtttg acttacgcga cagtttcgat gccctcgcct
     4801 cggctgaaaa actgccttac agcaagccgc atccgcaagt atatctcgac tgcgcagcaa
     4861 aactgggcgt tgacccactg acctgcgtgg cgctggaaga ctcggtaaat ggcatgatcg
     4921 cttctaaagc agcccgcatg cgttccatcg tcgttcctgc gccagaagcg caaaatgatc
     4981 cacgttttgt attagcaaac gtcaaactct catcgctgac agaactcacc gcaaaagacc
     5041 ttctcggtta atgaccaggg gcagtgatca cgctgcccct ggttctttat ctgaatttgc
     5101 attcaactga cggattaatc gtcaatttaa gagaaagagt tacaccgtca ccacttccgt
     5161 gcactgtata aaaatcctat actgtacgta tcgacagttt agtgagtttt atcatgacgg
     5221 cggaaggtca ccttctcttt tctattgctt gtgcggtatt tgccaaaaat gccgagctga
     5281 cgcccgtgct ggcacagggt gactggtggc atattgtccc ttccgcaatc ctgacgtgtt
     5341 tgttaccgga catcgatcac ccaaagtcgt ttcttgggca gcgattaaaa tggatatcaa
     5401 aaccgatcgc ccgcgctttt gggcatcgtg gttttaccca cagtctgctg gcggtatttg
     5461 cgctgctggc aaccttttac cttaaggttc cggaaggctg gttcattccg gctgatgcgc
     5521 tacaaggaat ggtgctgggt tatttgagcc acatacttgc cgatatgctg acacccgccg
     5581 gtgttcccct gctctggcca tgccgctggc gtttccgctt gcctatccta gttccccaaa
     5641 agggcaacca actggaacgt tttatctgta tggcattatt tgtctggtcg gtatggatgc
     5701 cccattcatt acccgagaac agcgctgttc gttggtcatc gcaaataatc aataccttgc
     5761 agatccagtt tcatcggctt attaagcatt aggttgaata ctaaaaagac aaaaatcacc
     5821 tttctggaat aagcaattcc atttgaatat aagagccagc tcacagttct gttaatcttg
     5881 cgccaacact atgactgcta cgcagtgata gaaataataa gatcaggaga acggggatga
     5941 actttccatt aattgcgaac atcgtggtgt tcgttgtact gctgtttgcg ctggctcaga
     6001 cccgccataa acagtggagt ctggcgaaaa aagtgctggt gggtctggtg atgggtgtgg
     6061 tttttggcct tgccctgcat accatttatg gttctgacag ccaggtactt aaagattctg
     6121 tacagtggtt taacatcgtt ggtaacggct atgttcaact gctgcaaatg atcgttatgc
     6181 cgttagtctt cgcctctatt ctgagcgcgg ttgcccgtct gcataacgca tctcagttag
     6241 gcaaaatcag ttttctgacc atcggtacgc ttttgtttac cacgctgatt gcggcgctgg
     6301 tcggtgtgct ggtcaccaac ctgtttggtt tgacggctga aggtctggtt cagggtggtg
     6361 cagaaactgc acgtctgaac gccattgaaa gtaactatgt tggtaaagtc tctgatctga
     6421 gcgttccgca gctggtcttg tcctttatcc cgaaaaaccc gtttgccgat cttaccggag
     6481 ccaatccgac gtcaattatc agcgtggtaa tttttgccgc attcctcggc gtagctgcat
     6541 tgaaactgct gaaggatgat gcgccgaaag gtgaacgcgt cttagccgct atcgataccc
     6601 tacaaagctg ggtgatgaaa ctggttcgcc ttgtcatgca gttgacccct tacggcgttc
     6661 tggctctaat gaccaaagtg gttgcaggtt ctaacttgca agacatcatc aaactgggaa
     6721 gtttcgttgt cgcgtcctac ctcggtctgc tgattatgtt tgcagtgcat ggcattctgc
     6781 tgggcattaa tggcgtgagt ccgctgaagt acttccgtaa ggtatggcct gtgctgacgt
     6841 ttgcctttac cagccgttcc agtgctgcgt ctatcccact gaatgtggaa gcacaaacgc
     6901 gtcgtctggg cgttcctgaa tccatcgcca gtttcgccgc ctctttcggt gcaaccattg
     6961 gtcagaacgg ctgcgccggt ttgtatccgg caatgctggc ggtgatggtt gcgcctacgg
     7021 ttggcattaa cccgctggac ccgatgtgga ttgcgacgct ggtcggtatt gttaccgtta
     7081 gttccgcagg cgttgccggt gtcggtggtg gtgcaacttt cgccgcactg attgtgctgc
     7141 ctgcgatggg cctgccagta accctggtgg cgctgttaat ctccgttgaa ccgcttatcg
     7201 acatgggccg tacggcgcta aacgttagtg gctcgatgac agctggcacg ctgaccagcc
     7261 agtggctgaa gcaaaccgat aaagccattc tggatagcga agacgacgcc gaactggcac
     7321 accgttaatt cttatgctgg caatggtccg ttttgtatag gggccgttgc tttacttttt
     7381 aaatgttcca tcgcggcgat gcatactgac tcatatttaa acagatcgtc agcgaa
//
LOCUS       DADKRT010000195         7428 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.198, whole genome shotgun sequence.
ACCESSION   DADKRT010000195 DADKRT010000000
VERSION     DADKRT010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7428
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.198"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(128..607)
                     /gene="folK"
                     /locus_tag="JQ356_003648"
     CDS             complement(128..607)
                     /gene="folK"
                     /locus_tag="JQ356_003648"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HAY4623616.1"
                     /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTP
                     PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQDRVRKAERWGPRTLDLDIMLF
                     GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDELSKW"
     gene            complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="JQ356_003649"
     CDS             complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="JQ356_003649"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HAY4623617.1"
                     /translation="MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQH
                     AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEY
                     HLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLL
                     ETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDE
                     EPSPRRRTRRPRKRAPRREGTA"
     gene            complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="JQ356_003650"
     CDS             complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="JQ356_003650"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HAY4623618.1"
                     /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
                     ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
                     HEQGLSYYCTCTRARIQSIVGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII
                     HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF
                     GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQVEAHWQDFS
                     VEQILQSAVKNWTLTAVPESAIVNSTFSNASC"
     gene            complement(3024..3479)
                     /locus_tag="JQ356_003651"
     CDS             complement(3024..3479)
                     /locus_tag="JQ356_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding transcription factor
                     DksA"
                     /protein_id="HAY4623619.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="JQ356_003652"
     CDS             complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="JQ356_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HAY4623620.1"
                     /translation="MEFSPLLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
                     ATRGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
                     GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
                     LRELMNVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
                     ISAEGMALKKSLPVTL"
     gene            complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="JQ356_003653"
     CDS             complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="JQ356_003653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HAY4623621.1"
                     /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL
                     TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL
                     ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA
                     RGRTRYTPLKRWALMQ"
     gene            4980..7409
                     /gene="hrpB"
                     /locus_tag="JQ356_003654"
     CDS             4980..7409
                     /gene="hrpB"
                     /locus_tag="JQ356_003654"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HAY4623622.1"
                     /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH
                     PGINGKIILLEPRRLAARNVAQRLEELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG
                     VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD
                     NDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLF
                     LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE
                     TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLH
                     LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRL
                     LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG
                     NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG
                     RYQLANGMGAMLDADDALSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQL
                     VQQSDTVEWDDAQGTLKAWRRLQIGLLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL
                     NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLD
                     IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN
                     PTIAQGRVPLVLELLSPAQSPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPAN
                     TAPTRRTKKYS"
BASE COUNT         1703 a         1915 c         2065 g         1745 t
ORIGIN      
        1 tgggattgat atttatctgc gggaatttat attatgtttc tgcaaaaatg tttaaactaa
       61 aatttttatt aaggaaagag aggatgtatg attttcagaa aatatttata ttcgtaatat
      121 aaataaatta ccatttgctt aattcgtcaa atgctcttgt atgtaagact tcacgcaacg
      181 tctccccatc aggaaacgcc agctccggtg caatctcaaa cagcggccac agcataaatc
      241 cacgattctt catatcgtag tgcggaacgg tcaggcgttc ggtatttatc acttcattac
      301 caaacagcat gatatcgaga tccagcgtgc gtggtcccca gcgttcagct ttacgaacac
      361 gatcctgttg cagttctatg cgctgtgtat ggttgagtaa ctcttccggg gcgagcgaag
      421 tttcaagcgc cacggcggcg ttgaggtaat cgggttgatc ttgcggcccc agcggtggag
      481 tgcggtaaaa cgaagaaacg gcaagaatgt ggctttcagg gatatcgcct aatgctttca
      541 gggcagcatt gacctgctcc agcggagagg ccagattgct gcctatggca atatacgcca
      601 ctgtcatgcg gtaccctcac gacgcggtgc gcgtttgcgt ggacgacgag tacggcgacg
      661 cggtgacggc tcttcatcca actcgttaag catccctttt tgatctggtg gcgcggaaac
      721 ctggaactca ccccaccatt tcaccagacg ctgcagttca gcgttacgtt caacttcagc
      781 tcgcaaggcc aacaggtcat aagccgcacg gaacttagga tgctccagca gtttccatgc
      841 gcgtttaccc tgacgacggg acatacgcaa ctgcaactgc cagatatcgc gggttaacgt
      901 cgtcagacgt ttcgggattg ccagtgaacg gcaggcttcg tccagcacgt cgttcatcgc
      961 cagcgcgaaa gcgtcgtgat aggtcaggcc gctttcctgg gcgatcttct gtgccgtctc
     1021 cagcagtggg taccagaaca tggcggcaaa caagaacgcc gggttcacgc gcatatcgtt
     1081 atggatacgc gtatcggtat tcttcagcac ctgttcaatg atccgctcca tcgggctgtc
     1141 gccattttcc gtgaagtagc gggtaatggt cgggaacagc ggctggaaca gatgatattc
     1201 acacaacagc ttataggttt cgtaaccgta gcccgcttgt agcagtttaa gcgattcttc
     1261 aaacaggcgt gccggtggga tatcgttcag cagggtagcg aggcgaggga tcggttctgc
     1321 ggtttccggg ctgatgcgca tacccaattt ggcggcaaaa cgtaccgcgc gcagcatacg
     1381 taccggatct tcacggtagc gcgtttccgg gttaccaatc agacggataa cgccgtcctt
     1441 cagatccttc atgccgccaa cgtaatcacg gacggtaaaa tccgctacgc tgtaatacag
     1501 gctgttgata gtgaaatcgc ggcgctgggc gtcttcttcg atggagccga aaatgttgtc
     1561 gcgcagcaac atgccgtttt gcccgcgttg ggaggtcgtg cggtcgctga cgttaccttc
     1621 gtggtgtcca cggaaggttg caacttcgat aatctccggg ccaaacatca catgagccag
     1681 acggaaacgg cgacccacaa ggcggcagtt acggaacagt ttgcgcacct gctcaggcgt
     1741 ggcgttagtg gttacgtcaa aatctttcgg ctttttgcca agtaacaggt cgcgcacgcc
     1801 gccgccaacc agccaggctt cgtatcccgc tttattgagc ctgtacatta ccttcagggc
     1861 attttcactg atatctttgc gggaaatagc atgctgctca cgcgggatca ccgtcacctg
     1921 tggacgggcg actgcctgtt cagcctcgct ttcctcgcgg cttagcacct tgcggcaaaa
     1981 attagcgact cgggtaaaaa tagtacacct cggtagtgtc aaacatcatt caggacaaaa
     2041 aaatagcggc taatcatagc tcagcatgac gcatttgaga atgttgaatt tacaattgcc
     2101 gactcgggca cggcggtcag cgtccagttt ttgacggctg actgaaggat ttgctcgacg
     2161 ctgaaatcct gccagtgtgc ttctacctgc tgccccagaa attgaagtgc cgcgattagt
     2221 accgggcgtg gatcgccttt cggcaacgca ggcgcatgat tctgcttgga aagtttagcg
     2281 ccttgtggat taagcgccag cggcagatga atgtaatctg gcactttcca gccaaaaagc
     2341 tggtacagcg agatttgcct tactgttggt tcaatcagat cagccccacg cactatttct
     2401 gtaacgccct ggaaatgatc atcaaccaca acagccaggt tgtaggcgaa caacccatca
     2461 cggcgatgaa tgataaaatc ttcccgtgcc agtttttcgt cggcgtgaat aatgccgcgc
     2521 agctggtcag taaattgcgt gaccggatgc tgctggcgga tacgcactgc ggcgttgtct
     2581 ggtccatgat gcaacacccg gcaatgaccg tcgtaaatac cgacaatgct ttgaatacgc
     2641 gcacgcgtac aggtgcagta ataacttagt ccttgttcat gtaaccaggc gagtgcttca
     2701 cgataggcgt cgtgacgttg cgattgccag agaacatcgc cgtcccagtg cagaccgtaa
     2761 tgttccagct ggcgcaggat agtttctgcg gcaccgggaa cttcacgagg cgggtcgata
     2821 tcttctatgc gtaccagcca gcgaccttgc cgggcgcgag cctgcaaata gctgccgagc
     2881 gcggcgatca gagagccaaa atgaagctcg ccggaaggag agggggcgaa gcggccaata
     2941 tactgtgtgt ctgtcatctc tttgaacaaa aaataaggcg ggagcatttc ccgcctgtgg
     3001 taaacgtgat ggaacggctg taattagcca gccatctgtt tttcgcgaat ttcagccagc
     3061 gttttgcagt cgatgcacag atcggctgtc gggcgcgctt ccagacggcg aataccaatt
     3121 tcaacaccgc aggattcgca gtagccgaaa tcttcgtctt ccactttttt cagcgtcttc
     3181 tcgatctttt tgatcagctt acgctcgcga tcgcggttac gcagttcgag gctgaactct
     3241 tcttcctggg ctgcacggtc taccgggtcc gggaagttgg ctgcttcatc ctgcatatgt
     3301 gtaacggtgc gatcgacttc atccctgagt tgattacgcc atgcttccag aatacgacgg
     3361 aagtgcgcca gctgggcttc attcatatac tcttcgcccg gcttctcctg atatggttcc
     3421 accccagcga tggcgagaat actcagggac gatgttttac ggttttgccc ttcttgcatg
     3481 ttgcttctcc ttaacacgca ctatcgatcc ccatgttcgg gggaaaaatg aggccgctat
     3541 aaatagcaga tgcttttccg gatagcaatt atctaaacgt aacacttgac aactgtgtga
     3601 ggaaaagcgt atttgcgcac gcgaccagaa tgtaaattaa ccagttactt actttactac
     3661 aatgtaaccg gcagtgattt tttaagagcc atgccttcag cagaaatttc cgctttgtaa
     3721 gccagaattt ctacccccct ctgttgagct tctgacaata gttgcgcgta tttctcatcg
     3781 atgtggcgcg cgggtgaaaa ccgtgtaatg gctgaatgca gcacggcgaa aaagataacc
     3841 gcacgctggc cttcagccgc tacgttcatc aactcccgaa ggtgtttctg acctcgttca
     3901 gtgaccgcat cgggaaaata tccctgttcg ttctccgcta acgtaaccga tttcacttca
     3961 atatagcagt ctggacgcga atccgcctgc aacataaagt caatacggct gcgttctgcg
     4021 ccatatttta cttcgctttt cagcgagcta tagcctgaca gttctgaaat tgattcatta
     4081 aggatagcct ctttcgtcaa cctgttagcc caaagcgtat tgacgcaaat aaatgcgccg
     4141 ctctggcttt gagttagttc ccaggtgtgt gggtatttcc gtttggtgtt gtctgaagtc
     4201 gaataccaga cggtatcgcc acgcgttgca caaccggtca tcgcacccgt attcgggcag
     4261 tgtagcgtta attcgcgacc atcgggtgtg atcacatcgg ctaaaaaacg tttgtaacgc
     4321 tgaattagcg tcgcgcgctg tagaagggga gagaattcca ttgcgacaat ccttgttatt
     4381 gcattagcgc ccagcgtttt agcggcgtgt agcgtgtgcg tccacgggca aacgaggagg
     4441 cgtaaagggt gaactccgtc accgcataag accagttaaa acctggcggc gggattgtca
     4501 ccgcctcgct ggcgtcgcgc aataaggtaa tatgtggatg aaacggacga ttgctttgaa
     4561 aacaaccgct gcgggcagcc tgtgaacgga gcatattcgc cagctggatt aagccgcgtg
     4621 gcggctgacg catccctaac cacaccacac gcgaacgcag ccattgtccg gcgtcatcaa
     4681 gcgtgagtgt gaaaccaggt tgacgaatcc gtccggctaa aagagaaagc gccttctctt
     4741 tctcggcgct cacttcgcct aaaaatgcca gagtcagatg caaattatcg gcggcgaccg
     4801 gacgtcccgc ctcaggtggg aagtgtgtgg cgcgccagtg gataatctgt tcgcggattt
     4861 ctgcaggtaa gtcgatagca aagaacagac gttgcggttc agacatgtga ggcactcggt
     4921 tatgaattac cgcgatgcta caatgtggcg cgaagaatgt taaccctctg gagcgttttg
     4981 tgtcgtcgtt gcccgttgct gccgttttac ctgaattact taccgctctc gattgtgcgc
     5041 cgcaggtatt attaagtgcg ccgaccgggg ccgggaaatc aacctggctg ccgctgcaac
     5101 tgctggcgca tcccggcatt aacgggaaaa ttatcctgct ggagccgcgt cgtctggcgg
     5161 cgcgtaacgt cgcgcaacgg ctggaggagc tgcttaacga aaagccaggc gataccgttg
     5221 gctaccggat gcgtgcgcaa aactgcgtcg ggccgaatac ccgcctggaa gtagttaccg
     5281 aaggcgtgct gacgcggatg atccagcgtg acccggagtt gagcggtgtt ggattggtga
     5341 tccttgatga atttcatgag cgtagcttgc aggcggattt ggcgttggcg ctgttactcg
     5401 atgtgcaaca aggtctgcgt gatgacctta aactgctaat tatgtcggct acgctggaca
     5461 acgaccgctt gcagcaaatg ctgccagaag cgcccgtcgt catctcagaa gggcgctcgt
     5521 ttccggttga acgccgttat ttaccgctgc ccgcgcatca gcgttttgac gatgccgttg
     5581 cggtagccac cgctgaaatg ctgcgtcagg aaagcggatc attactgtta tttttacctg
     5641 gcgtcggaga aattcagcgt gtgcaggaac aactggcttc gcgcatcggc agtgatgtat
     5701 tgctctgccc gctgtatggc gcgttgtcgc tgaacgatca gcgaaaagcg atcctcccgg
     5761 caccgcaagg gatgcgcaaa gtggtgctgg cgaccaatat tgctgaaacc agtttaacca
     5821 tcgaaggtat tcgtctggtg gtggattgtg cccaggagcg tgtggcgcgt tttgatccgc
     5881 gcacggggct aacgcgactg attactcaac gcgttagcca ggcatccatg acgcagcgtg
     5941 ccgggcgcgc cgggcgtctg gagccgggta tctgcctgca tctaatcgcc aaagaacaag
     6001 cagaacgcgc tgccgcgcaa agtgaaccgg aaatcttaca aagcgatctt tccggtttgc
     6061 tgatggaatt actgcaatgg ggatgcagcg atccggcgca gatgagctgg ctggatcaac
     6121 cgccaacggt gaatctactg gccgcgaaac gcctgttaca aatgctgggg gcgctggagg
     6181 gtgaacggct tagtgcgcag gggcaaaaaa tggcagcgct gggtaacgat ccgcgtttag
     6241 cggcaatgct ggttagcgcg aagaacgacg acgaagctgc taccgcggca aaaattgccg
     6301 ccattctcga agagccgcca cggatgggca atagtgacct gggcgtggcg ttttcgcgca
     6361 atcaaccagc ctggcagcaa cgtagtcagc aactgttaaa acgcttaaac gtacgtggcg
     6421 gtgaggcaga cagttcgctt atcgcgccgc tacttgccgg ggcgtttgcc gatcgcattg
     6481 ctcgtcgccg tgggcaagat ggacgctatc aactggcaaa cggcatggga gcgatgctcg
     6541 atgccgacga cgcgctaagc cgccacgaat ggttgatcgc accgttatta ttgcagggca
     6601 gcgcctcgcc ggatgcgcgg attttactgg cgctgccggt cgatattgat gagttagtac
     6661 aacgctgccc gcagctggta cagcagtctg acactgtgga gtgggatgac gcgcaaggta
     6721 cgctgaaagc ctggcgtcgg ctgcaaatcg gtctgctgac ggtgaaagtg cagccgctgg
     6781 cgaaaccctc ggaagacgag ttgcatcagg cgatgcttaa tggcatccgt gataaaggtt
     6841 taagcgtgct caactggacg gcggaagcgg aacagctacg cttgcgtttg ttatgcgccg
     6901 caaagtggtt gccggaatat gactggccag cggttgatga tgaaagttta ttggcgacgc
     6961 tggaaacgtg gctgctgcca catatgactg gcgtacattc actacgcggc ctgaaatcac
     7021 tcgacattta tcaggcacta cgcggattac ttgattgggg aatgcagcaa cgtctggata
     7081 gtgaattgcc tgcgcattac actgtgccga cgggaagccg gatcgccatt cgttatcatg
     7141 aagataaccc gcccgcgctg gcggtgagaa tgcaagagat gtttggcgag gccaccaatc
     7201 cgacgatcgc ccaggggcgc gtgccgctgg tgctggagtt gctttcacct gcccaaagtc
     7261 cattacaaat cacacgagat ttgagcgcct tctggaaagg agcgtaccgt gaggtgcaaa
     7321 aagagatgaa agggcgttat cccaaacatg tctggccgga cgacccggca aatactgcac
     7381 cgacgcgacg gacgaaaaag tattcgtaag gttggttttc tccctctc
//
LOCUS       DADKRT010000196         7216 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.199, whole genome shotgun sequence.
ACCESSION   DADKRT010000196 DADKRT010000000
VERSION     DADKRT010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7216
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.199"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(827..1357)
                     /locus_tag="JQ356_003655"
                     /pseudo
     CDS             complement(827..1357)
                     /locus_tag="JQ356_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416483.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
     gene            complement(1700..2350)
                     /gene="zinT"
                     /locus_tag="JQ356_003656"
     CDS             complement(1700..2350)
                     /gene="zinT"
                     /locus_tag="JQ356_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HAY4623623.1"
                     /translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV
                     FDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA
                     TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
                     YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
     gene            complement(2607..3242)
                     /gene="msrQ"
                     /locus_tag="JQ356_003657"
     CDS             complement(2607..3242)
                     /gene="msrQ"
                     /locus_tag="JQ356_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HAY4623624.1"
                     /translation="MRLTAKQVTWLKVSLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
                     HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
                     NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL
                     APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV"
     gene            complement(3243..4247)
                     /gene="msrP"
                     /locus_tag="JQ356_003658"
     CDS             complement(3243..4247)
                     /gene="msrP"
                     /locus_tag="JQ356_003658"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HAY4623625.1"
                     /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHA
                     DLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLTPVDKVSGYNNFYEFGLDKADPAA
                     NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYADQVASLYRGLDLRENF
                     "
     gene            complement(4356..4769)
                     /gene="hiuH"
                     /locus_tag="JQ356_003659"
     CDS             complement(4356..4769)
                     /gene="hiuH"
                     /locus_tag="JQ356_003659"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HAY4623626.1"
                     /translation="MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQTGKPAAD
                     VTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLES
                     FFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS"
     gene            4902..5573
                     /gene="hprR"
                     /locus_tag="JQ356_003660"
     CDS             4902..5573
                     /gene="hprR"
                     /locus_tag="JQ356_003660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707854.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HAY4623627.1"
                     /translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD
                     YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF
                     SFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLA
                     SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF
                     VAVKK"
     gene            5573..6931
                     /locus_tag="JQ356_003661"
     CDS             5573..6931
                     /locus_tag="JQ356_003661"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal sensor histidine kinase"
                     /protein_id="HAY4623628.1"
                     /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT
                     LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDDMLN
                     NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
                     SIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPL
                     GQALNKMHQALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA
                     GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF
                     KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDIASLGTK
                     IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSASYHYLNKHNVFRITLPQ
                     RN"
BASE COUNT         2027 a         1490 c         1632 g         2067 t
ORIGIN      
        1 agctgagaaa aaagcgtgct ttcccaatct ggggcaaatc acgtctgaat gacacctgaa
       61 aacaggtggt ggactcaaga aggcttggaa tattcttctt taatgttatg taattcattg
      121 atttttcgtg tacgatttta agacattttt tccaagaaaa atttttaact ctttgatttt
      181 tcgactctgt atcatcggtc tcgaaaaccg gagtaggggc aactctaccg ggggggcaaa
      241 tccccctctc tccgccactt tatcaatgac ttatctcccg acttcccgcc ttacttttcc
      301 taaacagaac aatcgtagaa tattcttgaa gggttagatc gtcactgttt tctgttcgat
      361 actgtgacat tcagcacttg attcgctatg gatctgacag gaagctttcg agcgaaaatg
      421 tgcagttatt cagtcgtttt cttatcgctc accattattc ttttagacat tcatcctatg
      481 aaactgccgc aaagttggtg gtgggaactg aagttgcgta gagaaggggt caataattga
      541 gtcaaaaaag gaacgcggcc gtcagattaa agccgcggga caaagtccat aatttccaag
      601 agttgttgaa tttcccagct tttttgaaag cctttgtatc atactaacaa gtaaaaaagg
      661 tttaaatacc aaaattaacc tgtatttttg ataagtctta ccattgtacg atttacacag
      721 tttctgctcc tccttgttga tagtggaaag ggtgcattgt gcacttgcgt aaacatttat
      781 gacgcgttga tgtccatggt tcacatttcc ttgtcagggg atcgacttat ttgcggcgag
      841 gcatcattcg taacagagta ttatctttct gaatgtagtg atgaaagagt gctgcgccag
      901 cgtgagctgc gattaaaaag taacctatat ttgcccaggt ttcgtgaata ttttatatca
      961 gtgctttaat ttcgctgttt ggggtaacaa agggagacac attgaaacca aggaaactcc
     1021 acgattttcc actgtaagcc atcaaagcaa tccccagcag aggaagtgca aggaaggtta
     1081 tataaagcat gatgtgcatt agcgaagccg ctttcatttg ccaggcaggt ggcggtggca
     1141 caatagaagg atcactataa cggtgtttta taatcaggcg tgaaaacatt aacacccaaa
     1201 cgaatatacc cgcattgtaa tgtgtttctc gcatcagcag ataagtacta ctacctttag
     1261 gaaaccagcc acggagttcc atcgcggcat aggttattgc aacgaaaagc agcgttatcc
     1321 aatgtaaata aatttgagtt tttgagaatc ggttcatttt tgtagctcct gtaattttta
     1381 cagtcaagct atcccacgaa ccttaaaaat tccttataca gatgtggttt taagaatttg
     1441 ttatttaaaa aattgatagt gcacattgta accagccaat ataagcaatg gcgtgagcac
     1501 aggtatcttt ctctgttggc cgtattgtgt atggaatccg ttattggtta actcaatgcg
     1561 ggttagctta ttaatataca gacacgtcat agtgatgagc gtgtctgtag ctagcttgcg
     1621 ttcagtggcg tttgtggatg gaccagtggc agttatgatg acttactaaa gcggcatcga
     1681 ggcgttatca tgagaatact caatgagaca tcatttcctc gaccacttct tcgctactca
     1741 actgatatgg ataatacgtt ggccagtttt ccatttcatt taataaagat tgctgtgaat
     1801 cattacccat aaaaatgtga aaatgagatg attttcgtgg tgcaattata tgatcgctaa
     1861 attgtatata tttaggggct ttgctttcag gatctttaca ttcgaataag taacgaacgc
     1921 ctttcttgcc tgatttatag gtgagtattt tgtatccatc gtaatcatat ttacaggatg
     1981 ttgtttcatt atttctatgg aattcaacaa tgccgtcctc aatgccaatc atctcgatat
     2041 ctgttgcata acctttgtga taataatctt taatttcagc aaatgtttta gttttatctg
     2101 catccgcttt cttctgaaag acggggtcaa gtttgccact ttgcagtaaa ggataaacgg
     2161 attgccagac cccatcccag tcactgagcg ttcggttttg tacattggca tcatcaaaaa
     2221 caccattagc agctttttgt tcgacctctg ttaagggttt gccgtgtgag tgatgaccat
     2281 gcgaaaaggc aggagcgcta acaataaaga cacctaacgc aacagccagt ttgtgaagac
     2341 gaatcgccaa aacagtttcc tccagagtca ttgtatatga tgtgtaatgt tatattgtaa
     2401 catatggcaa aatgcaacaa ctcttaggag atgagagcat agttttctca ggtgtactta
     2461 tctatcttat tgaaataaaa tgaattatat tgataatttg aggttgatga caaacgaaac
     2521 ataatctgat gtgatctgcg taggccggat agggcgctcg cgccgcatcc ggcagggata
     2581 acgcgtactt tgtcggcaat atgaagttat acagataatt tgttgtgaac ctgcttgcgt
     2641 aaccggttaa aaagggaacg caacttctta taccgtaagg ctaaaagcag tacagccagc
     2701 ccagcgtaga tgagcggctg cggtgaaata atcttcactg accacagata atgtattggg
     2761 gccaggatcg cgacaagata gacgaaatta tgcaactgtt gccagtgctt gccgagtttt
     2821 cgctgcatcg cctgggttga agtaaacgct aaagcaagca aaataaccca gctgataatt
     2881 cctaacgtta aataaggccg ggtaattaac tccttgccta ataacgccag attattcacg
     2941 cccagctcca gcaatgcgta actggttaaa tgcagtgtcg cccaggcaaa gcaccataag
     3001 cctaacaggc ggcgagtgcg tatcaataac ggctgttttg cgtagcgtgc cagaggtgtg
     3061 attaacaagg tcgccagcaa aaatttcagt gcagtgcgac cggtaaaatg ctgaatatct
     3121 ttcaccggat cggcacccag tccaccgtga ttgatcgccc agaccagcca gagaaacggc
     3181 aacaatccgg caagatgcag gctaactttc agccatgtca cctgttttgc tgtcagacgc
     3241 attcagaaat tctcccgcaa atccaggcca cgatacagcg atgccacctg gtcggcgtaa
     3301 ccattaaaca gtagcgttgg ctggcgctga acatcgagga tgccgcctga accaataaat
     3361 cgttcggtag cctgtgacca gcgcgggtga tcaacatgcg gattaacgtt ggcgtaaaaa
     3421 ccgtattcgt caggcgctgc cagattccag gtggttggcg gacgctcgcg ggtcagctta
     3481 atactgacta tcgatttaat ccctttaaag ccatatttcc acggcacaat cagtcgtacc
     3541 ggcgcgccat tttgtggcgg taacgccttg ccataaacac ccacggtcat cagtgtgagc
     3601 ggatgcattg cttcgtcgag acgcaatcct tcgacataag gatatttcag cccgccgccg
     3661 ataaagcggt cctgctggcc tggcatttgt tccggtgcat aaattgtttc gaaagcgaca
     3721 tacttcgcat tgctggtggg ttcggcaagc gccagcaatt tgtgcagcgg aaaaccaatc
     3781 cacggcacca ccatcgacca tgcctccacg cagcgcatac gataaatacg ctcttccagc
     3841 gggaagcgac gggttaaatc atcgtgatcg agggtcaatg gttttgccac ttcgccgctg
     3901 attttcagtg tccatggatc ggttttcagg ctaccagcat tagcggcggg atcggcttta
     3961 tccagcccga attcatagaa gttgttataa ccggagactt tatctactgg cgtcagtggc
     4021 aggttatttt gccaggcggc aggcttgctg aactccagcg gttttccggc gggggcgggc
     4081 gggcgatcgt tccctttaaa ccagctaagc agatcggcat gcgcagcgtg aggcaaagaa
     4141 agtgcagctg cactgatgcc cagtgctttt aacacctgcc gacgcttcat aaagaatacc
     4201 gactcggccg taacatctga ttcttttaaa aattgattct ttttcataag ccatcacact
     4261 tttttgtcgt tagccagcaa gagccgttta ctgttaatct gtcagggagt gtcctcccta
     4321 acagtagcag agatctgctt ttacatattt atgcattaac tgccacgata ggttgaatac
     4381 ccatattggc taagtaataa aggcacatga taatgctcgt tcactttatt aatatgaaat
     4441 tcaacgggga tctcagggaa gaaactttca agattttgtt tcttgaaata gtccccggtt
     4501 ttaaatacga cacggtaatc gcccgtagtt gcagtttgct cgggccacag tgctttaatt
     4561 cgtccatcct tatctgtttt ggcggtatta agttgtaacc agccgttatc cgccttcttt
     4621 tcaagagtga ctgtcacgtc agcagcgggc tttccggttt gctggttcaa aatgtgcacg
     4681 ctaagaatgt tttgttgtgc ggcataaacc aaagaaggta atgaaaatgc tgccgttgct
     4741 accgagagta ctaaataacg ctttaacatg tttatatcct tgtcatgtga atgagttttg
     4801 aggatagcga aaaagcggcc agggtaacct tacagcagca ttacaatttt gtaatgaacc
     4861 aggctgtttc tataacatat gatttatggc atattatttt catgaagatt ttacttattg
     4921 aagataatca aaggacccag gagtgggtaa cgcaggggct ttccgaagcg ggttatgtca
     4981 ttgatgccgt ttctgatggc agagatgggc tttatcttgc gctgaaggat gattatgcat
     5041 tgataattct ggatattatg cttccgggta tggatggctg gcagatctta caaacgttaa
     5101 gaacagcaaa gcaaacccct gttatttgcc ttactgcaag ggattctgtc gatgacagag
     5161 tcagagggct ggacagtgga gcaaatgatt atctggtaaa acctttttca ttttctgagt
     5221 tgctggcaag ggttcgggca caattaaggc aacatcacgc tttgaattca acattagaaa
     5281 tcagtggctt aagaatggac tctgtaagtc aaagtgtgag cagggacaat atcagtatta
     5341 cactgacgcg caaggagttt cagttacttt ggctactggc ctccagagct ggcgaaatta
     5401 tacccagaac ggttattgcg agtgaaattt ggggaatcaa ctttgatagt gataccaata
     5461 cggtggatgt cgccattcgc aggctccgcg caaaagttga tgatcctttt cctgaaaagc
     5521 taatcgccac aatccggggg atgggctatt cattcgtagc ggtaaaaaaa taatgaaaag
     5581 attgtctata accgtccgtt taaccttgct ttttatattg ctgctgtctg ttgctggcgc
     5641 tggaattgtc tggactctct ataatggcct ggcaagtgag ttgaaatggc gcgatgatac
     5701 aacactcatt aaccggacag cacagatcaa gcagttgtta attgatgggg taaatccaga
     5761 tacgttacct gtatacttta accggatgat ggatgttagt caggatatct tgatcattca
     5821 tggtgatggc atcaataaaa ttgttaaccg gacaaatgtc agtgatgaca tgttaaataa
     5881 catacctgct agtgagacaa tcagcgcagc tggcatttac agaagcatta ttaatgatac
     5941 tgagattgat gctttacgaa ttaatattga tgaagtttcg ccatcattaa cggttactgt
     6001 ggctaaattg gcttcagcta gacataacat gcttgaacag tataaaatta atagcattat
     6061 aatttgcatt gtcgccattg tactttgctc agtattaagt ccgctgttaa tcagaacggg
     6121 attacgagag atcaaaaagt tgagtggtgt aacggaagcg ctgaattata acgatagccg
     6181 agagcctgtt gaggttagcg cattaccgag agaactaaaa cctcttgggc aggcgttgaa
     6241 taaaatgcat caagccttag tcaaagattt tgaacgccta agtcaatttg ctgacgatct
     6301 cgctcatgaa cttagaacgc ccattaatgc attactgggt cagaatcagg ttacgctcag
     6361 tcaaaccaga agtatcgctg aatatcaaaa aacaattgcc ggtaacattg aagagttgga
     6421 aaatatttcg cggttaacag agaacatact gtttcttgcc cgggcagata aaaacaatgt
     6481 tttggtgaaa ctggactcgc tttctctcaa taaggaagtc gaaaatttgt tggattatct
     6541 tgaatatctt tcagacgaga aagagatttg ctttaaggtc gagtgcaatc agcaaatctt
     6601 tgcggataaa attttactgc aacgaatgtt atcgaatctt attgttaatg ccattagata
     6661 ttcaccagaa aaatcgcgta ttcatataac cagttttctt gataccaacg gctatcttaa
     6721 tattgatatc gccagtcttg gaacgaaaat acatgagcct gaaaaactct tccgtagatt
     6781 ttggcgggga gataattcgc gtcattccgt aggtcaggga cttggtcttt ctttagtcaa
     6841 agcgattgcc gaattgcatg ggggaagtgc ttcatatcac tatctcaata agcataatgt
     6901 gttccgaatt acgttaccgc aaagaaatta acatagggct tcagtacgcc ataaattaac
     6961 cgtgaaaaaa cgcagccacg tcgtgagtac taacgcggct gcgattaatt atgcgcttac
     7021 attcaaacgt aacagggatt aacccgcgta agctgccagc atttcctgcg ccgccagttt
     7081 acccaacgca ttcgctgcga aaggactgtc gccggtgaga agtttacggt ccttatgtac
     7141 tcgcccggtg atgtcgtcat taatgatgtt catgcccatt ttcttcagct cttcgccgaa
     7201 gtaccaggtg agatga
//
LOCUS       DADKRT010000197         7212 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.200, whole genome shotgun sequence.
ACCESSION   DADKRT010000197 DADKRT010000000
VERSION     DADKRT010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7212
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.200"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..372
                     /locus_tag="JQ356_003662"
     CDS             <1..372
                     /locus_tag="JQ356_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4623629.1"
                     /translation="RPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQY
                     RKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRL
                     KGKLTPALLQILIREIKGSSH"
     gene            372..719
                     /gene="tnpB"
                     /locus_tag="JQ356_003663"
     CDS             372..719
                     /gene="tnpB"
                     /locus_tag="JQ356_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000624623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY4623630.1"
                     /translation="MISFPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLF
                     IFRGRRGDQIKVLWADSDGLCLFTRRLERGRFVWPVTRDGKVHLTPAQLSMLLEGIDW
                     KHPKRTERAGIRI"
     gene            739..1893
                     /locus_tag="JQ356_003664"
                     /pseudo
     CDS             739..1893
                     /locus_tag="JQ356_003664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            1897..2056
                     /locus_tag="JQ356_003665"
                     /pseudo
     CDS             1897..2056
                     /locus_tag="JQ356_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            2645..2943
                     /locus_tag="JQ356_003666"
                     /pseudo
     CDS             2645..2943
                     /locus_tag="JQ356_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343747.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3025..3162
                     /locus_tag="JQ356_003667"
                     /pseudo
     CDS             3025..3162
                     /locus_tag="JQ356_003667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787828.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            3532..4209
                     /gene="ospD1"
                     /locus_tag="JQ356_003668"
     CDS             3532..4209
                     /gene="ospD1"
                     /locus_tag="JQ356_003668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspD1"
                     /protein_id="HAY4623631.1"
                     /translation="MSINNYGLHPANNKNMHLIIGSNTANENKGMKRNIINVTNTAIS
                     HAINEEKSGGGYSGVSFRKLAKIQSISIPTKNNKEYNRHNLFSLIWHGNADAARKYGE
                     SLLAAEIPKEEKLEVLAARNNAGESALFIALQEGHSAAIQAYGDFIKTFDLSPKETIK
                     LLDVRDNEGVPGLFLAAGKGNIEAMMAYINICHHSGIKLTEIADRLNNNEQDMFNIIS
                     DKIQELF"
     gene            4533..4643
                     /locus_tag="JQ356_003669"
                     /pseudo
     CDS             4533..4643
                     /locus_tag="JQ356_003669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            4721..5035
                     /locus_tag="JQ356_003670"
     CDS             4721..5035
                     /locus_tag="JQ356_003670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623632.1"
                     /translation="MLQRQRGKVGFAQLPVDFVAIEPDSAQGVGKRANLTNRCFIIRI
                     NDSFKKRQGFIEFISNSGSGHTVTVYTKRRFQRGVFMNSLNTNVVKPVMYRLRSSADA
                     RP"
     gene            5317..5883
                     /locus_tag="JQ356_003671"
     CDS             5317..5883
                     /locus_tag="JQ356_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623633.1"
                     /translation="MLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKIN
                     TSILSSVSEQIGENITDWKNDEKKVYVSRVVNQCIDKFCAEHSRKIGDNLRKQIFKQV
                     EKDYHISLDINAAQSSINHLVSGSSYFKKKMDELCEGMNRSVKNDTTSNVANLISDQF
                     FEKNVQYIDLKKLRGNMSDYITNLESPF"
     gene            complement(6088..6204)
                     /locus_tag="JQ356_003672"
                     /pseudo
     CDS             complement(6088..6204)
                     /locus_tag="JQ356_003672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004989794.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            6410..6978
                     /locus_tag="JQ356_003673"
                     /pseudo
     CDS             6410..6978
                     /locus_tag="JQ356_003673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT         2112 a         1560 c         1680 g         1860 t
ORIGIN      
        1 cggcctaatt ttccttatga atttaaaatc gccttagtgg agcagtcact gcagcccgga
       61 gcctgtgtgg cgcagatcgc ccgtgaaaac ggaatcaacg ataacctgct cttcaactgg
      121 cgccatcaat accggaaagg tggcctgctg ccttccggaa aaaatatgcc tgcactgctt
      181 cccgtgacgt taacgccgga gccggataat aaaatcccgg ctccggcaca ggaaccagag
      241 cagataaata caccgtccga cagtctgtgc tgtgagctgg ttctgccggc cggaactctc
      301 aggcttaaag gtaaactgac gccggcgtta ttacagatac ttatccgcga aataaaaggg
      361 agcagccact gatgatatct ttccctgcag gttcgcgtat ctggctggtt gcaggtatca
      421 ccgatatgcg aaatggcttt aacggcctgg cctcaaaagt tcagaacgtc ctgaaggatg
      481 acccgttctc cgggcatctg ttcatcttcc gcggacgccg gggtgaccag ataaaagtgt
      541 tgtgggctga cagtgacgga ctgtgcctct ttaccagacg cctggagcgg ggccgcttcg
      601 tctggccggt cacccgtgac ggcaaggtgc accttactcc ggcccagtta tccatgcttc
      661 ttgagggcat cgactggaaa cacccgaaac gaacggaacg cgctggcatc cgcatataac
      721 ccgttgtaaa gtgaggatat ggacacctca cttgctcatg agaatgcccg cctgcgggca
      781 ctgttgcaga cgcaacagga caccatccgc cagatggcga aatacaaccg cctgctctca
      841 cagcgggtgg cggcttatgc ttccgaaatc aaccggctga aggcgctggt tgcgaaactg
      901 cagcgcatgc agttcggtta aagctcagaa aaacttcgcg caaaaaccga acggcagata
      961 ctggaagcac aggagcgaat cagcgcactt caggaagaaa tggcggaaac gctgggtgag
     1021 caatatgacc cggtactgcc atctcccctg cgccagtctt cagcccgtaa accgttacct
     1081 gcctcacttc cccgtgaaac ccgggtcatc cgtccggaag aggaatgctg cccggcctgt
     1141 ggtggcgaac tcagttctct gggatgtgat gtgtcagagc agctggagct tatcagcagc
     1201 gcctttaagg ttatcgaaac acaacgtccg aaactggcct gttgccggtg tgaccatatc
     1261 gtgcaggcac cggtgccttc aaaacccatt gcacgcagtt atgccggagc ggggcttctg
     1321 gcccatgttg tcgctggaaa atatgcaggc tatctgccgt tataccgcca gtcagaaata
     1381 taccgtcgtc agggcgtgga gctgagccgt gccacactgg gtcgctggac cggtgccgtt
     1441 gctgaactgc tggagccgct gtatgacgtc ctgcgccagt atgtgctgat gcccggtaaa
     1501 gttcatgcgg atgatatccc cgttccggtc caggagccgg gcagtggtaa aacaagaact
     1561 gcccggctgt gggtctatgt ccgtgatgac cgtaacgccg gttcggaaat gcctccggcg
     1621 gtctggttcg cgtactcacc ggaccggaaa ggtatccatc cacagaatca tctggccggt
     1681 tacagcggag tgcttcaggc cgatgcttac ggtggttacc gggcgttgta cgaatccggc
     1741 agaataacgg aagccctgct gcgtatcggt gaactgtatg ccatcgaggc agaagtccgg
     1801 ggatgttcag cagaacagcg tctggcggca agaaaagcca gagccgcgcc actgatgcag
     1861 tcactgtatg actggataca gcaacagatg aaaattcact cgctgaaaat ggaatgtctc
     1921 cacggagaac actattatcc atcgggaaat agtgcgggca acagtgttta gttatatcga
     1981 gtgcgattac aatcgctggc gacggcaccg ttggtgtggt ggtctcagtc cggaacaatt
     2041 tgaaaaccag agcctcactt acgactgtgt ccatattatg tgggtaggat caataaagac
     2101 gttttatatg tgtctgcttg cagccagaaa atttataccc tgcaggtatc ataaacatgc
     2161 ttgacaactt aattagggcc ccctcttcct tttatggtgt aattgtttga ttgaatactt
     2221 ccggggattt cagtatgaaa tgaagtatat ttaatatact ttacaaaaag tttgtattag
     2281 tggaataaga acaatagttt atccaaactg ccaagcccct ttattataag taagatctgg
     2341 cactggaata ttctcaaaag gactaacatc atcaccacga ccttcaacca accataaaaa
     2401 acaatactat tttaggtgat gtattaaatt agtagaatat ttattcttct ataaaagcac
     2461 taccccaaga ggttaatcag gtcatccatg attatttatc atatactaac tatgtgggat
     2521 ttcaacgtga aaacttattt tcactataat cttcaggatt cgaagatcat aggagcctgt
     2581 acataagttt gtataattct ctgatgttga actatttaat ttgatatcaa atgaaggtga
     2641 atttatgaat gaaaaacagt tgacatctaa taagttgcgg gctttagcta atgaactagc
     2701 caaaagtctc aaaaatcctg aagatctcag tcagtttgat tggatgctga aaatgaaacc
     2761 gtactcaatg ctaatatgac tcatcatctt gggtgcgaga aaaatcagct tagatctggc
     2821 agcaattccc gcaatggttg cttaacgaag attatcacta ctggagatga acctctggaa
     2881 atccgtactc tgcgtgatcg taatggcact ttcgaaccgc aacagctgaa gaaaaaccag
     2941 ccctagatta ctaaatctgt cgggcgatgg attaactggt tcaggctgtc tggtgctgaa
     3001 ggcctgaagt cactgctgtc agtgatgtgg ccggctcttc atgagacaat aacccgtaat
     3061 catcagtgcc gttcaatatg gccactgttg aaaaaagttc gtcactttat ggagacggtt
     3121 agcccacttc ccggagaaaa acatagtctg gccaaagtgt agcggtatta ggctcacata
     3181 tttagatgta gataagccgg agcaggcagt taaatctagg cagcatcaca gaaatggaca
     3241 acgcccctta aggactggcg tatggcaatg agctgcttta ttatcaagtt tggtgatcgc
     3301 cttgacggtc acttctgagt gaaggcgctt gcacagaatg gtaaacggac tcgattattg
     3361 aatcttaggg ataagatata tctacgatat gtcaatatac gaaatcgaaa gaatttattg
     3421 gtgaatatag ccattcaatg tggcaatggt ttttttagat tagcaataga ctaatatcta
     3481 ttacattaca aaaataggtt attgtttttt tagcaaaaag gatgaacaaa aatgtcaata
     3541 aataactatg gattacatcc agcaaacaac aaaaatatgc acctaataat aggcagcaat
     3601 actgctaatg aaaataaagg aatgaaacgt aatatcatta acgtgacaaa taccgctata
     3661 tcccacgcca tcaatgaaga aaaatcaggg gggggatata gtggtgtttc tttcagaaaa
     3721 ttggccaaaa tacagagcat atccattccg acaaagaata ataaggagta taaccgccat
     3781 aatttgtttt cattgatttg gcatggaaat gctgatgcag cgcgtaaata cggtgaatcg
     3841 ctgttggcag ccgaaatacc caaagaggaa aaactagaag ttcttgcagc acgaaataat
     3901 gctggggaat ctgctttgtt catagctctt caagaaggtc attccgctgc gattcaagct
     3961 tatggagatt ttattaaaac ttttgattta tcaccaaaag aaacgattaa actattggat
     4021 gtaagagata atgagggggt accaggatta tttctggccg cagggaaagg gaatatcgag
     4081 gctatgatgg catatataaa tatatgccat catagtggga taaaacttac agaaatagca
     4141 gacagactta acaataatga acaagacatg tttaatatta tttctgacaa aatacaagag
     4201 ttgttttaag tgtgctaaat agctgcaaag aattgcactt agaaggagct ctccccgaat
     4261 tgtgtgatct gcttaatttc taaaaagaaa caaacagtta actagactga gcgatactac
     4321 ccatagaacc agtttcccat gacgaacgac actggacgca aaaacaatca taaaaaacac
     4381 aataaatgta atgaacacat cccaccctat taagtaaagt gcactgtgat agaggaaggg
     4441 aaatacagga aggtgtggag ccttgcagat ttctggcatc atagtgccca atacggaatg
     4501 cataaagccc cctcagactg gagactccac aaatgaaata tacagtgttt aattatatca
     4561 agtgcgatta caatcgctga cgacggcaca gttggtgtgg aggtctcagt cctgaacaat
     4621 ttgaaaacca gaacctcact taagcctgtg ttcatattac gtgggtagga tcatactttt
     4681 atagaagctg tcagtggcta cgtcccagct aaatcacttc atgctccagc gccagagagg
     4741 caaggttggg tttgctcagc tgccggttga ttttgttgcg attgaaccgg acagcgccca
     4801 gggtgtcggc aaaagagcga atctcaccaa tcgttgtttc attatccgca ttaacgatag
     4861 cttcaagaaa cgccaaggtt ttatcgaatt catcagcaac agtggctccg ggcataccgt
     4921 gaccgtttat acaaaaaggc gttttcagcg tggagttttc atgaatagcc tcaacacgaa
     4981 tgtcgtgaag ccagtgatgt atcggctacg atcctcagct gatgccagac cataggactg
     5041 acactacgaa cagcaatttt aatgacgtaa atcttcataa ctacaactaa cagggcatca
     5101 ttatgaatga tgccggttat tttaccgctg ttggtccctt catttaggga ctgccccaag
     5161 ttttttcata ctctctttct cagagagttt agtctctggg attccagacg gtccatcatt
     5221 gagccaaggg agtaaagaac tcaaagcatt tacagaattg tttgaatcag ctaaaataat
     5281 gacaatgtta ctattttaca tgacaaagtg attataatgc ttggaacatc ttttaataat
     5341 tttggaatca gtttatctca caaaagatat ttttcaggaa aggttgatga gattatccgc
     5401 tgtacaatgg ggaaaaggat agtaaaaata tcatcaacca aaataaatac tagtattttg
     5461 agctctgttt cagaacaaat cggtgaaaat attacagatt ggaaaaatga tgaaaaaaaa
     5521 gtctacgtat cccgggtggt aaaccaatgt attgataagt tttgtgcaga acacagccga
     5581 aaaatcggcg ataatctccg taaacagata tttaaacagg ttgagaaaga ttatcacatt
     5641 tctctagaca tcaatgctgc acaaagttcc ataaatcatc ttgtatcagg aagcagttat
     5701 ttcaaaaaga aaatggacga actttgtgaa gggatgaata gaagcgttaa aaatgataca
     5761 acaagcaatg ttgcaaatct tatttccgat cagttttttg agaaaaatgt gcaatatatt
     5821 gatctaaaga aattacgtgg gaatatgagt gattatatta caaatttaga atcgcctttc
     5881 tgatgacaga acatcccgag taaagaaact aagaaaagta aatacccagg aattgcctga
     5941 gcggtgctat atttctcctc gcaagtaagt cctaatatat tgaattgttg tatagccagt
     6001 ttttgtattt tcctagctca tggatgtggg atccctctcc cctttctctg ctcaaaggta
     6061 agcggctcgt cagaatcata ttgatattta ctgagaagtc agatcaactt tccaaggcaa
     6121 cagatcgcgt acccggtttg ccggtcagtc ctggatatgt tcaataacgt aacgcagcca
     6181 tttttctggc tccacattgt tcagacggca tgtgccgatc agcgagaaca acaccgctgc
     6241 atgttcgtca ccgctgtcgg aacctgcgag tcgagtcagc cggagagagt ttcactctcc
     6301 ggctgctcac ggaaccgtac gtgacactct cgcgtcatac ggctcttgat cactcattcg
     6361 atgcacgtag taaataccag tgagcaaatt gatcttaccc agcaatacgg tcagttaccg
     6421 cgcacatggc ctgcctgtgt cagaaaatct gctggagcag gatttttacg ccagtggtcc
     6481 gaaccagaag tgggcgggag acatcacgta cttacgtaca gatgaaggct ggctgtatct
     6541 ggctgtggtc attgacctgt ggtcattgac ctgtggtcac gtgccgttat tggctggtcc
     6601 atgtcaccac gcctgacggc gcaactggcc tgcgatgccc tgcagatggc gctgtggcgg
     6661 cgtaagagac cccggaacgt tatcgttcac tcggaccgag gaagtcagta ctgttcagca
     6721 gattatcagg cgctgctgaa gtggcataat ctgcgtggca gtatgagcgc aaagggctgc
     6781 tgctacgata atgcctgcgt ggaaagcttc tttcattcgc tgaaagtgga atgtctccac
     6841 ggagaacact ttatcagccg ggaaataatg cgggcaacag tgtttaatta tatcgaatgt
     6901 gattacaatc gctggcgacg gcacagttgg tgtggcggcc tcagtccgga acaatttgaa
     6961 aaccagaacc tcgcttaggc ctgtgtccat attacgtggg taggatcact tacgccctgt
     7021 ggttgaaacg tgagcatatt gttttcagat gctgttgtct tgcttcagag tgatctgtcc
     7081 tccggattta cgcaaagtta tccacaggca ctgtgcattt aaaaaactta tcttttcttc
     7141 ttgattttaa aaactcagat cgtcatatca ttatgataaa cataataaaa aactctaaac
     7201 atgagaaggt tt
//
LOCUS       DADKRT010000198         7122 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.201, whole genome shotgun sequence.
ACCESSION   DADKRT010000198 DADKRT010000000
VERSION     DADKRT010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7122
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.201"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..650
                     /locus_tag="JQ356_003674"
     CDS             <1..650
                     /locus_tag="JQ356_003674"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709490.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HAY4623634.1"
                     /translation="TYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVV
                     QEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGH
                     AAFVDAGKLLPNIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAE
                     LLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV"
     gene            741..1988
                     /gene="tnaB"
                     /locus_tag="JQ356_003675"
     CDS             741..1988
                     /gene="tnaB"
                     /locus_tag="JQ356_003675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity tryptophan permease TnaB"
                     /protein_id="HAY4623635.1"
                     /translation="MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAF
                     ILIIAWFSMLHSGLLLLEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTY
                     AYISANGAIISETISMNLGYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKI
                     ISFVIVFGSFFFQVDYSILRDATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIIC
                     YGKRKDKLIKSVVFGSLLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLG
                     TKQHGIIEFCLLVFSNLAVASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPP
                     ALLYLIFPNGFIYGIGGAGLCATIWAVIIPAVLAIKARKKFPNQMFTVWGGNLIPAIV
                     ILFGITVILCWFGNVFNVLPKFG"
     gene            2120..3295
                     /gene="mdtL"
                     /locus_tag="JQ356_003676"
     CDS             2120..3295
                     /gene="mdtL"
                     /locus_tag="JQ356_003676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtL"
                     /protein_id="HAY4623636.1"
                     /translation="MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQG
                     LGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF
                     WAMAMMGIAVLMLSLFILKETRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVI
                     LTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQV
                     LFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIA
                     QVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA"
     gene            3270..4229
                     /gene="yidZ"
                     /locus_tag="JQ356_003677"
     CDS             3270..4229
                     /gene="yidZ"
                     /locus_tag="JQ356_003677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HAY4623637.1"
                     /translation="MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA
                     AESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR
                     ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWAL
                     DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL
                     PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA"
     gene            4386..5135
                     /locus_tag="JQ356_003678"
     CDS             4386..5135
                     /locus_tag="JQ356_003678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709485.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623638.1"
                     /translation="MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRG
                     LLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLD
                     MELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLN
                     DDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPAIEKLSVWELDGKHSWK
                     SLPDIHSRANNPTSRMMRFAQLSTVKSFSPN"
     gene            5157..5723
                     /gene="yieF"
                     /locus_tag="JQ356_003679"
     CDS             5157..5723
                     /gene="yieF"
                     /locus_tag="JQ356_003679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent chromate oxidoreductase YieF"
                     /protein_id="HAY4623639.1"
                     /translation="MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA
                     DIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLP
                     DQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDRQT
                     GEVIDQGTLDHLTGQLTAFGEFIQRVKI"
     gene            complement(5777..7114)
                     /locus_tag="JQ356_003680"
     CDS             complement(5777..7114)
                     /locus_tag="JQ356_003680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY4623640.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLG
                     WMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAV
                     VVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH"
BASE COUNT         1693 a         1823 c         1803 g         1803 t
ORIGIN      
        1 aaacctacaa atatgccgat atgctggcga tgtccgccaa gaaagatgcg atggtgccga
       61 tgggcggctt gctgtgcatg aaagacgaca gcttctttga tgtgtacacc gagtgcagaa
      121 ccctttgcgt ggtgcaggaa ggcttcccga catatggcgg cctggaaggc ggcgcgatgg
      181 agcgtctggc ggtaggtctg tatgacggca tgaatctcga ctggctggct tatcgtatcg
      241 cgcaggtaca gtatctggtc gatggtctgg aagagattgg cgttgtctgc cagcaggcgg
      301 gcggtcacgc ggcattcgtt gatgccggta aactgctgcc gaatatcccg gcagaccagt
      361 tcccggcaca ggcgctggcg tgcgagctgt ataaagtcgc cggtatccgt gcggtagaaa
      421 ttggctcttt cctgttaggc cgcgatccga aaaccggtaa acaactgcca tgcccggctg
      481 aactgctgcg tttaaccatt ccgcgcgcaa catatactca aacacatatg gacttcatta
      541 ttgaagcctt taaacatgtg aaagagaacg cggcgaatat taaaggatta acctttacct
      601 acgaaccaaa agtattgcgt cacttcaccg caaaactgaa agaagtttaa ttaatactac
      661 agagtggcta taaggatgtt agccactctc ttaccctaca tcctcaataa caaaaatagc
      721 cttcctctaa aggtggcatc atgactgatc aagctgaaaa aaagcactct gcattttggg
      781 gtgttatggt tatagcaggt acagtaattg gtggaggtat gtttgcttta cctgttgatc
      841 ttgccggtgc ctggtttttc tggggtgcct ttatccttat cattgcctgg ttttcaatgc
      901 ttcattccgg gttattgtta ttagaagcaa atttaaatta tcctgtcggc tccagtttta
      961 acaccatcac caaagattta atcggtaaca cctggaacat tatcagcggt attaccgttg
     1021 ccttcgttct ctatatcctc acttatgcct atatctctgc taatggtgcg atcattagtg
     1081 aaacgatatc aatgaatttg ggctatcacg ctaatccacg tattgtcggg atctgcacag
     1141 ccattttcgt tgccagcgta ttgtggataa gttcgttagc cgccagtcgc attacctcat
     1201 tgttcctcgg gctgaagatt atctcctttg tgatcgtgtt tggttctttc ttcttccagg
     1261 tcgattactc catcctgcgc gatgccacca gcaccactgc gggaacgtct tacttcccgt
     1321 atatctttat ggctttgccg gtgtgtctgg cgtcatttgg tttccacggc aatattccca
     1381 gcctgattat ttgctatgga aaacgcaaag ataagttaat caaaagcgtg gtatttggtt
     1441 cgctgctggc gctggtgatt tatctcttct ggctctattg cacgatgggg aatattccgc
     1501 gcgaaagctt taaggcgata atctcctcag gcggcaacgt tgattcgctg gtgaaatcgt
     1561 tcctcggcac caaacagcac ggcattatcg agttttgcct gctggtgttc tctaacttag
     1621 ctgttgccag ttcgttcttt ggtgtcacgc tggggttgtt cgattatctg gcggacctgt
     1681 ttaagattga taactcccac ggcgggcgtt tcaaaaccgt gctgttaacc ttcctgccac
     1741 ctgcgttgtt gtatctgatc ttcccgaacg gctttattta cgggatcggc ggtgccgggc
     1801 tgtgcgccac catctgggcg gtcattattc ccgcagtgct tgcaatcaaa gctcgcaaga
     1861 agtttcccaa tcagatgttc acggtctggg gcggcaatct tattccggcg attgtcattc
     1921 tctttggtat aaccgtgatt ttgtgctggt tcggcaacgt ctttaacgtg ttacctaaat
     1981 ttggctaaat ccttcaagaa gccagccatt cgctggcttc ttgcctctca ggaaatcact
     2041 tatgtccaaa tggcaactcg cctgatcctc cttcaccacg tatgctttgc gtcaccttac
     2101 tatcaggacg ctttagccca tgtcccgctt tttgatttgt agttttgccc tggttttact
     2161 ttatcccgcc gggattgata tgtacctcgt tggtttaccg cgcatcgccg ccgatctcaa
     2221 tgccagcgaa gcgcagttgc atattgcgtt ctccgtatat ctggcgggga tggcagctgc
     2281 gatgttattt gccggtaaag tggccgatcg ttcagggaga aagccggtcg ccatacccgg
     2341 cgcggcgcta tttattattg cctcggtgtt ctgttcactg gctgaaacca gcacgttatt
     2401 tcttgcaggc cgatttctac aggggttggg cgcaggctgt tgttacgtag tggcgttcgc
     2461 cattttgcgc gacacgctgg atgatcgacg tcgggctaaa gtgctgtcat tactcaacgg
     2521 tattacctgc atcattccgg tgttagcgcc agtgctcgga catctgatta tgcttaaatt
     2581 cccgtggcag agtctgttct gggcgatggc aatgatgggc atcgcggtac tgatgttgtc
     2641 tttgtttatt ttaaaagaaa cgcgcccagc gtcccccgct gcttcggaca aaccacgaga
     2701 aaatagcgag tcgctgctta atcggttttt cctcagccgt gttgttatca ccaccctcag
     2761 cgtttcggtg atcctcactt tcgtcaatac atcgccggta ttgctgatgg aaatcatggg
     2821 ttttgagcgc ggagaatacg ccaccattat ggcgttgacc gctggcgtca gcatgaccgt
     2881 ttcattctcc acgccatttg cgctgggaat ttttaagcca cgtacgttga tgatcacctc
     2941 gcaggtgtta ttccttgcag cggggatcac ccttgccgtt tcaccttccc atgcggtttc
     3001 tctgtttggt atcacactga tttgcgccgg tttctcggta ggttttggcg tagcgatgag
     3061 tcaggcgtta ggaccatttt cattacgcgc gggcgtagcc agctcgacct taggtattgc
     3121 gcaggtttgc ggttcgtcac tgtggatttg gctggcagcg gtggttggta tcggcgcatg
     3181 gaatatgctg atcgggattc tgattgcctg tagcatagtg agcctgttgc tgattatgtt
     3241 cgtcgcgcct ggacgccccg ttgccgctca tgaagaaatc catcaccacg cttgatctca
     3301 atctgctgct ctgtctgcaa ctgctgatgc aggagcgcag cgtgaccaaa gcggcgaagc
     3361 ggatgaacgt gaccccttca gcggtgagta agtcgctggc aaagttaaga gcgtggtttg
     3421 acgacccgct ctttgtgaac tcaccgctgg ggctgtcgcc cacaccgcta atggtcagca
     3481 tggagcaaaa tctggcggaa tggatgcaaa tgagcaatct gctgctggat aaaccgcacc
     3541 accagacacc gcgcggcctg aagtttgagt tggcggcgga atcgccgctg atgatgatca
     3601 tgcttaatgc gctgtcgaaa cggatctacc aacgttaccc gcaggcgacc atcaaactac
     3661 gtaactggga ttacgattcc ttagatgcca ttactcgtgg tgaagtggat attggttttt
     3721 ccggtcgcga aagccatcct cgctcgcggg agctgttaag ctcgctaccg ttagccattg
     3781 attatgaagt gctgtttagt gatgtaccct gcgtctggtt acgcaaagat catccggcac
     3841 tgcatgaaac gtggaatctg gacacctttt tacgttatcc gcatatcagc atttgctggg
     3901 aacagagcga cacctgggcg ctggacaatg tgttacagga gctggggcgc gaacgcacga
     3961 ttgctatgag cctgccggaa tttgagcagt cactgtttat ggctgcgcaa cccgacaatc
     4021 tgctactggc gaccgcgccg cgctactgtc agtactacaa tcaactccat caactgccgt
     4081 tggttgctct tcctctcccg tttgacgaaa gccagcaaaa aaagctggaa gttcctttta
     4141 ccctgctgtg gcataaacgg aacagtcata atccgaagat cgtctggtta cgggaaacca
     4201 ttaaaaacct ttacgcgtcg atggcataac cgaatcgtat gaaacgcgac ccaatttcac
     4261 aataaaatgt aaaaaagttg taataagctt gtctgaatcg aacttttagc cgctttagtc
     4321 tgtccatcat tccagtaaat gattactctt atattcataa tggaccatta agcatggagc
     4381 gaaaaatggc gactcacttt gcccgaggga ttttaacgga aggacatctg atttctgttc
     4441 gtctcccctc ccagtgtcat caagaagccc gaaacattcc ccctcatcgt caaagccgtt
     4501 ttctggcgtc cagaggttta ctcgcagaac tgatgttcat gctgtatggc attggcgaat
     4561 tgccggaaat cgtcaccctg ccgaaaggta aaccggtttt cagtgataaa aatttgcctt
     4621 cgttttctat ttcctatgcc gggaatatgg ttggcgtggc gttaacaacc gaaggtgaat
     4681 gtggcctcga tatggaacta cagcgtgcga cgcgcgggtt tcatagccca cacgcgcccg
     4741 ataaccacac cttttccagc aatgaatcgc tatggatcag taaacaaaac gatcctaacg
     4801 aagcgcgggc gcagctcatc acgctgcgcc gaagcgtgct aaaactaacc ggtgatgttt
     4861 tgaatgacga tccgcgcgat ctgcagctgc tgcccattgc cggacgcctg aaatgtgctc
     4921 atgtaaatca tgtagaagcg ttatgcgacg cggaggacgt gctggtgtgg tccgtggcgg
     4981 tcacgcccgc gattgaaaag ctcagtgtct gggagttaga tggcaaacac agctggaaaa
     5041 gcctgccgga tattcacagc cgcgccaaca atcctaccag ccggatgatg cgttttgccc
     5101 agctctctac cgtgaagtct ttttcgccaa attgatagac aaccacagga gtcattatgt
     5161 ctgaaaaatt gcaggtggtt acgttactgg ggagcctgcg caaaggctca tttaatggca
     5221 tggttgcacg taccctgccg aaaattgctc cggcgagcat ggaagtcaat gcgttacctt
     5281 ccattgccga cattcccctg tatgacgctg acgtacagca ggaagaaggt tttccagcaa
     5341 cggttgaagc tctggcggaa cagatccgtc aggctgacgg tgtggtgatc gtcacgccgg
     5401 aatataacta ctcggtaccg ggtgggctga aaaatgccat cgactggctt tcccgcctgc
     5461 cggatcaacc gctggccggt aaaccggtgt tgattcagac cagctcaatg ggcgtgattg
     5521 gcggcgcgcg ctgtcagtat cacctgcgcc agattctggt tttcctcgat gcaatggtga
     5581 tgaacaagcc ggaatttatg ggcggcgtga ttcagaacaa agttgatcgg caaaccggag
     5641 aagtgattga tcagggtacg ctggaccacc tgaccgggca attgaccgca tttggtgagt
     5701 ttattcagcg agttaagatc taaataaaaa acccgccagt aatcatgcat ggcgggtttt
     5761 taatgcgcta tcgattttaa tgagcgtcga taaatacaat cttcaggata aacagcagcg
     5821 caacgatgat tacgcacggg ctaaggtcac gcagacgccc ggtaccaatc ttcatcacgc
     5881 agtaggagat aaagcccagc gcaatacctt cggtaatcga aaagctgaac ggcatcatca
     5941 cggcggtaat aaacgccgga acagattcag taagatcctg ccagttcacg cgagcaagac
     6001 ttgaggtcat caacacgcca acgtagatca acgcgccagc tgcagcgtag cctggcacca
     6061 ttcccgccag cggcgacaga aagataacca gcaggaacag cagaccaaca accactgccg
     6121 tcagaccggt acgaccgcca accgatacgc cggaagagga ctcaatataa gccgtaacgg
     6181 aagaagtacc gataaacgaa ccggtcacgg aagagatact gtcgacatac agcgcctgct
     6241 tcatgcgcgg gaatttcccc ttctcatccg ccagacctgc tttatcggtc acgccaatca
     6301 gcgtaccgga ggagtcaaac aagttgacca acatgaaaga gaaaatcacc cctgccagcc
     6361 cgaggttaaa cgacccggct aaatctacat gacccacaac tgtcattacg ctcggcggcg
     6421 cagaaacgat gccattgtag tgcacatcac ccagcatcca gcccagcagc gtcgtcacca
     6481 cgatagaaac cagcaccgct gcgtgaatgt tgcgcgaggc cagaatagca atgatgaaga
     6541 agccgaggat acccagaagt acgctgtgag aagtcagatt accgatgctc accagcgttt
     6601 ccgagttagc gacaatcaca cctgcgtttt tcagccccat catgccgata aacaggccga
     6661 taccgctggt aatacccaca cgcagactta ccggaatgtt agcaatcatc cagtaacgaa
     6721 cgcggaaaat ggtcaaaaga agcagtccga cagcgcccca gaagattgcg cccataccga
     6781 tctgccacgg cagccccatt gcctggacaa ccacaaaagc gaaaaaggcg ttaagcccca
     6841 tcgcaggagc cagcgccacc ggaaggtttg caaacaatcc catcataatg ctaccgaaag
     6901 cagcaatcag acaggttgtt acgaagacgg cactggtgtc catgccagca acgcccagaa
     6961 tttgtgggtt aacaaaaacg atgtaaacca tcgtcaggaa ggtggtaaaa ccggcgatca
     7021 cttcggtccg tgccgtcgtg ccatgttcgc gcagtttaaa cacgcgttcc agcatcccct
     7081 ggccagaagc ctgggttgtg tgttgttgac tcattatcta tt
//
LOCUS       DADKRT010000199         7063 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.202, whole genome shotgun sequence.
ACCESSION   DADKRT010000199 DADKRT010000000
VERSION     DADKRT010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7063
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.202"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..332
                     /locus_tag="JQ356_003681"
     CDS             <1..332
                     /locus_tag="JQ356_003681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY4623641.1"
                     /translation="ELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGS
                     SSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASW
                     LAENLQS"
     gene            329..2315
                     /locus_tag="JQ356_003682"
                     /pseudo
     CDS             329..2315
                     /locus_tag="JQ356_003682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708010.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2440..2901
                     /locus_tag="JQ356_003683"
     CDS             2440..2901
                     /locus_tag="JQ356_003683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416627.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HAY4623642.1"
                     /translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT
                     YVYKGDKVLKQSSETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYA
                     QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK"
     gene            complement(2942..3412)
                     /locus_tag="JQ356_003684"
     CDS             complement(2942..3412)
                     /locus_tag="JQ356_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HAY4623643.1"
                     /translation="MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE
                     DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD
                     DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS"
     gene            complement(3459..4178)
                     /gene="yehT"
                     /locus_tag="JQ356_003685"
     CDS             complement(3459..4178)
                     /gene="yehT"
                     /locus_tag="JQ356_003685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310963.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HAY4623644.1"
                     /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH
                     KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
                     SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKSLKEAIGL"
     gene            complement(4175..5860)
                     /gene="btsS"
                     /locus_tag="JQ356_003686"
     CDS             complement(4175..5860)
                     /gene="btsS"
                     /locus_tag="JQ356_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulatory system sensor histidine
                     kinase BtsS"
                     /protein_id="HAY4623645.1"
                     /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
                     LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
                     IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
                     NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
                     GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLQLPWRDEA"
     gene            6082..6147
                     /locus_tag="JQ356_003687"
                     /pseudo
     CDS             6082..6147
                     /locus_tag="JQ356_003687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
     gene            6375..6623
                     /locus_tag="JQ356_003688"
     CDS             6375..6623
                     /locus_tag="JQ356_003688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY4623646.1"
                     /translation="MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(6739..7008)
                     /locus_tag="JQ356_003689"
     CDS             complement(6739..7008)
                     /locus_tag="JQ356_003689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4623647.1"
                     /translation="MLLQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEHIAPLQD
                     AVDLEIATEEENSLLEAWKKYRVLLNCVDTSTAPDIEWPEEPDTM"
BASE COUNT         1809 a         1801 c         1719 g         1734 t
ORIGIN      
        1 tagagttatt aatgaaagta cagttgggcg gcgggaccaa tatcgccagt gccgtggagt
       61 atggtcggca acttattgaa caaccagcga aaagcgtcat tatcctcgtg agcgattttt
      121 acgaaggggg ttcatcatca ttactgacgc atcaggtgaa aaagtgtgtc cagagcggca
      181 tcaaagtgct gggactggca gcgctcgata gcacagcaac accttgctat gaccgcgata
      241 cggcccaggc gctggttaat gtcggcgcac aaatagccgc catgacaccg ggcgagctgg
      301 catcatggct tgcggagaat cttcagtcat gaattcacta cgtccggaat tattagaact
      361 gacaccgcag gccctgacgg cgttaagcaa tgccggtttt gttaagcgca gtcttaagga
      421 actggaaaat ggcaacgtcc cggagatcag ccatgagaac ggcgctttaa tcgccacctt
      481 cagtgacggt gtccgtaccc agctggcgaa cggccaggca ctgaaagagg ctcagtgcag
      541 ctgcggggcc agcggtatgt gccgtcatcg cgtgatgctg gtgttaagtt atcaacgact
      601 ttgtgctacc gcccagccta cgggaaaaga agaggaatgg gatccggcaa tctggctgga
      661 agaactggct acccttcccg atgccacccg caaacgcgca caggcgctgg tcgctaaagg
      721 catcaccatt gagttgttct gtgcgccggg tgaaattccc tctgcccgct taccgatgag
      781 cgatgtgcgt ttttattccc gcagcagtat tcgtttcgcc cgttgtgatt gtattgaagg
      841 cacactttgc gaacatgtcg tactggcagt acaggccttt gtccaggcaa aagcgcagca
      901 agcggaattg actcatttaa tctggcagat gcgcagcgaa cacgtcacat catctgacga
      961 tccgtttgcc agcgaagaag gcaaaacgtg tcgtcaatat gttcaacaac taagccaggc
     1021 attatggctg agcggcatca gccagccgct tattcactac gaggccgctt tcagccgcgc
     1081 gcagcaagca gcggaacgct gcagctggcg atgggtgagt gaatcgctac ggcaactgcg
     1141 cgccagcgtt gatgccttcc acgcccgcgc cagccactat catgccggag aatgcttacg
     1201 tcagcttgcg gcattaaaca gtcgattaaa ctgcgcacaa gagatggccc ggcgcgacag
     1261 tgttggtgaa gttcctcctg tgccgtggcg cacggtcgtt ggctctggca ttgccggaga
     1321 agcaaagctt gatcatctgc ggctggtgtc tttaggtatg cgttgctggc aggatattga
     1381 gcattatggt ttacgcatct ggtttaccga tcccgacacc ggcagtattt tgcatctttc
     1441 gcgtagttgg ccgcgaagtg aacaggaaaa ctcaccggca gctacgcgtc ggctgtttag
     1501 ttttcaggct ggcgcactgg cgggtgggca aattgtttca caagcagcaa aacgcagtgc
     1561 cgatggcgag ctgctgttag ctacccgcaa ccgcttaagc agcgttgtgc cgctgtcgcc
     1621 agacgcctgg caaatgttga gcgcgccgtt acgccagccg ggcattgtgg ctttgcggga
     1681 atatttacgc cagcgtcccc ccgcctgcat acggcctctt aatcaggtgg ataacttatt
     1741 tatagtgtat ttcactcggt tgggacagcg gccgccagac gctggatgcg caggtaatca
     1801 gcggcgaagg tgaagataat ctgctgacgt tatcccttcc ggcatctgcc tgttctcctt
     1861 ttgccgttga acgcatggcg gcgcttttgc aacaaacaga cgaccccgtg agtctggttt
     1921 ctggctttgt cagctttgta gaggggcaat tgacactgga accacgggtg atgatgacaa
     1981 aaacccgtgc ctgggcgctg gacgcggaaa ctgcgcctgt ggcaccgcta ccttctgcca
     2041 gcgttttgcc tgtgccgtct accgctcatc agttgctgat gcgctgccag gcgttactta
     2101 ttcaactgct ccataacggc tggcgctatc aggaacagag cgctattagt caggcagagt
     2161 tgctggcgaa tgacctcacc gcggtgggtt tttatcggct ggcacatgtg ttggtacaat
     2221 ttcgtaatac agaaagcgag gcacgggtag aagcaatgaa taacggtgtt ttgctttgcg
     2281 aacaattatt ccccatgctt cagcaacaag gatgaaatag tgctttttac taagagttct
     2341 actccagttc cggactgctc acgccacggt attaggcata tcctatatag cccctggtga
     2401 gagtcaccag tttcttgatt aaataaaatg gagttttaca tgaaggcttt caataagctg
     2461 ttttccctcg ttgttgcatc tgttctggtt ttctctcttg ctggctgcgg tgacaaagaa
     2521 gaatcgaaga aattcagcgc caatctgaac ggcactgaaa ttgccattac ctatgtctac
     2581 aaaggtgaca aggtgcttaa gcaatcttct gaaaccaaaa ttcaatttgc ctccattagt
     2641 gcaaccacca aagaagatgc tgccaagaca cttgagccgt taagcgccaa atacaaaaac
     2701 atcgcgggtg ttgaagaaaa attaacctat accgatacct acgcgcagga aaacgtgact
     2761 atcgatatgg aaaaagtgga ttttaaagcc ctgcagggta tttcaggaat caacgtttct
     2821 gctgaagatg ccaaaaaagg tatcactatg gcgcaaatgg aactggtgat gaaagccgct
     2881 ggttttaaag aagtgaaata atctgtcggc ggccatgttt cgtatggccg ccatacccgt
     2941 cttagctttt cttcacatgc tggcgcgctg ccagtccacg cagaaaataa cgtaaaaatt
     3001 gatcgccgca ttcgcggaag tttttatgat ccggtgcgcg catcatcgct gtaatttccg
     3061 gcatcgaaac gcggaactgc tgttcggtga ggatagccag aatgtcatcg gttttcagcg
     3121 aaaacgcgat gcgtaatttt ttcagcacga tgttgttatt aatgcgacgt tccggctcca
     3181 gtgccggagc agactcatcc ttgccgcgtt tttcataaat caggccattg aggaatgacg
     3241 acaaaacaat gtccggacaa cgctgaaaac cctcttcgtc ttctttacgt agccagacgg
     3301 cgatctgttc cgcggtggct tcgacattac ccagcgccag aatacgcacc aggtcattat
     3361 tattggcttt caaaatgtag cgcacgctgc gcagaatatc gttacttagc atgaggcctt
     3421 caggtgttga tgaggcaaaa agccatttta gcagtctttt acaggccaat cgcctctttt
     3481 aagcttttca gataacggcg gctgaccggc acggttaagc cattacgcaa aatcaactcg
     3541 gcctggccgt tatcttccag acgaatctcc tgtaaatgcg cgaggttaac cagatactga
     3601 cgatggcagc gcagtagtgg tgtacgactt tccagggtac gtaatgtcaa ttcggtaaag
     3661 ccctctttcc cttcgtggct ggtaacgtag acaccgctca tccgactgct gacaaatgcc
     3721 acatctttca tttgcagcaa ataaatccga ctatgccccg tacaagggat aaatttcagc
     3781 gcctgttgat tttccggtaa cagcgaaaca tcctgcttgc tgcgctcctg acgcaatcgc
     3841 gccagcgttt tctccagtcg cgcttcatca attggcttca gcagataatc aaaggcatgt
     3901 tcttcaaagg ctttaatagc gtattcgtca aacgcagtga gaaaaacaat atacgggcga
     3961 tgttccgggt caagcatccc caccatttcc agaccactga tgcgcggcat ctggatatcg
     4021 agaaacagca catccgggcg cagtttatgc accgcgccga tcccttccac ggcgtttgaa
     4081 cactctccaa cgatttcaat atcgctctgc tcctgcaaaa atacacgcag gttctcccgt
     4141 gctaacggtt catcatcgac aattaagact ttaatcatgc ctcgtccctc catggtagtt
     4201 gtaacgttat tcgggtgtaa ctatcaggct cacaggcgac gcttattcca tagtcatcgc
     4261 caaaccgttc acgtaaacgc ttatccacca gattcatccc cagcccactg gcattggtta
     4321 ccggttgata caaaccggca ttgtcttcga tctccagcat caaatgttgc ccctcacgtc
     4381 gggcgctgat tgccactcgc cctgtatcca gcagttgtga tgtcccatgt ttaatggcgt
     4441 tttccactat cggttgcagg gtaaacgcgg gcaattgctg ctgggataat tcttgcggaa
     4501 tagcaatgtt gacctgcaac cgcgactgga agcgcgcctt ttcaatttgc agataagcgt
     4561 tcacatgttc aatttcgtcg gcgagagtaa caaactccga aggccgcttt aagtttttgc
     4621 ggaaaaaagt ggaaagatac tgcaccagct ggctggcctg ttcgctgtcg cggcggatca
     4681 ccgctttaat ggtgttaagc gcattaaaca aaaaatgagg attcacctgg gcgtgaagca
     4741 gtttgatttc tgactgggtg agcatcgctt tttgccgctc atattgcccg gcaagaatct
     4801 gcgccgaaag cagttgcgca atcccctcgc ccagcgtgcg gtttattgaa ctgaataaac
     4861 ggtttttggc ttcatacaat ttgatggtgc ccatcacccg ctgattttca ccacgcaacg
     4921 gaattaccag cgtcgacccc agtttgcatt gcggatgcaa agagcaacga taaggtactt
     4981 cgttgccatc agcgtagacc acttcaccgg tttcaatcgc ttttaaggtg taagtcgaag
     5041 aaatcggttt gccgggtaaa tggtggtcgt caccaattcc agtaaaggcc agcaatttct
     5101 ctcgatcggt aatcgcgact gcaccaatat ccagctcctg atacagcacc tgtgccactt
     5161 tcatgctgtt cacttcgtta aacccctggc gcaaaatgcc ttccgtcgag gcagccactt
     5221 tcagcgcagt ggcagaaaaa gccgaagtgt atttttcaaa catcgcgcgt ttatcgagca
     5281 atatacgcat aaacagcgcc gcgccgacgg tattggtgac catcattggt gcagcaatat
     5341 tactcaccag acgcaccgca tcttcataag gtcgggcgat cgccaggatg atcaacattt
     5401 gcaccatttc agcgacgaac gtgacggcac cggcggtaat ggggttaaag actttatcag
     5461 tacgcccgcg acgaatcagg atgctgtgta ccaggccgcc gagcaatcct tcaacgatgg
     5521 tcgagatcat gcaacttagc gcggtcatgc cccccatcga atatcgatgt aacccgccgg
     5581 tcaggccaac cagcccaccg acgaccggac cgccgagtaa gccgcccatt accgcgccta
     5641 tcgcacgggt attggcaata gaatcgtcaa tgtgcaaccc aaaccaggtg cccatgatgc
     5701 agaagatgga aaagacgatg tagcagagaa atttatgcgg cagacgaacc gtgacctgca
     5761 ttaacggtat gaataatggc gttttactca ttaaccacgc aatgactaaa aaaacgcaca
     5821 tctgctgaag cagcagcaac accagattaa aatcgtacat acccgcaaac cacacttccc
     5881 tttaaaacgc gtaacataca ttgcctgcgt ttaactttct ttgaactctt gcagaaaaat
     5941 gagaattcgt gagtacgatc actcaaaatc gcctggcaaa aataaaatca ccctatagat
     6001 gcacaaaaaa cgggcaaaac tacctggttc gcaaaactgc gtctaaagtt aaaccgggac
     6061 ctcgcgagca agggtgagac gatggcgctt tacacaattg gtgaagtggc gttgctttgt
     6121 gatattaacc ctgtcacgtt acgcgcgtga cgcaacattt taaaaaatcg acgaagatcg
     6181 tccaggagcg ccgtttttca agggttggat agatgattcg tttaccatgt cgacgaactt
     6241 cgacgaattt cgccgataaa aagtgtccca tacatgcccc attgatgcac cataaacaat
     6301 atcagaaatt gatactggtt atccatacag ataaaaataa cacctgtaca taactacagt
     6361 tacaggaggg tgttatgcgt gttgagatct gtatcgctaa agaaaaaatc actaaaatgc
     6421 caaacggtgc tgtggatgcg ttaaaggaag aattaacccg acgcatcagt aaacgttatg
     6481 acgatgtaga ggtgatcgta aaagccacca gcaacgatgg cctttctgtt acacgcaccg
     6541 cagataagga ttctgcaaaa acatttgttc aggagactct gaaagatacc tgggagtctg
     6601 ctgacgagtg gtttgttcac taataaacac gtaaaatcgg taacggctgg aaatcattca
     6661 atactcgcac tatcgaaagt ttaccagcca accgcagcac gtcctgcata cgtcgtgtct
     6721 acggtttttc tttttcgctt acattgtgtc tggttcttcc ggccactcaa tatcaggtgc
     6781 agttgatgta tcaacacagt tcagcaacac ccgatacttc ttccaggctt ccagcaacga
     6841 gttttcttcc tccgttgcga tctccagatc tacagcatcc tgaagtggcg caatatgctc
     6901 actgaattcc tggatgtaga actgtgtggt gacggtcttc cagccattcg gctcctgctg
     6961 tatcgaagca taccaggcta tttcaatatc gctatgctgc agcagcattt aaccccttgt
     7021 aattcatcgc cataattgat ttaattcaca aataaaacta taa
//
LOCUS       DADKRT010000200         7057 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.203, whole genome shotgun sequence.
ACCESSION   DADKRT010000200 DADKRT010000000
VERSION     DADKRT010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7057
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.203"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            40..246
                     /locus_tag="JQ356_003690"
                     /pseudo
     CDS             40..246
                     /locus_tag="JQ356_003690"
                     /inference="COORDINATES: protein motif:HMM:TIGR02601.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            991..2904
                     /locus_tag="JQ356_003691"
                     /pseudo
     CDS             991..2904
                     /locus_tag="JQ356_003691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001306477.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(3032..3754)
                     /locus_tag="JQ356_003692"
     CDS             complement(3032..3754)
                     /locus_tag="JQ356_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinone
                     3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol
                     methylase"
                     /protein_id="HAY4623648.1"
                     /translation="MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
                     LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
                     LTNTFKLGPGVDVNYMLHTQNK"
     gene            3901..6528
                     /gene="gyrA"
                     /locus_tag="JQ356_003693"
     CDS             3901..6528
                     /gene="gyrA"
                     /locus_tag="JQ356_003693"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HAY4623649.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK
                     IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
                     IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
                     VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
                     LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL
                     IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
                     DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
                     EGDDEIAPEVDVDDEPEEE"
     gene            6677..>7057
                     /locus_tag="JQ356_003694"
     CDS             6677..>7057
                     /locus_tag="JQ356_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2138 family protein"
                     /protein_id="HAY4623650.1"
                     /translation="MSGEKKAKGWRFYGLVGFGAIVLLSAGVWALQYAGSGPEKTLSP
                     LVMHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIE
                     GSIRRIVYEHDLTLKDKLFSSLLDQ"
BASE COUNT         1693 a         1744 c         2014 g         1606 t
ORIGIN      
        1 ggctatggag atggtccttc cactgcggcg ggtggcttta tgtatctcgg cttaagtgaa
       61 gttacctttg atattgccga cggaaaaacg ctggttatcg gcaatacaga gaatgacgga
      121 gctgttgact ctattgctgg taccgggttg atcaccaaaa caggttccgg cgatctggta
      181 cttaatgcag ataacaatga ctttactggc gagatgcaga ttgaaaacgg tgaagttacc
      241 ctgggccgca gcaactccct gatgaatgtc ggcgatacgc attgccagga cgatccgcaa
      301 gactgctacg gtctgacgat agggagtatt gataagtacc agaatcaggc agagctaaac
      361 gttggctcca cccaacaaac ctttgtgcac tcattgacgg gctttcagaa tggcacttta
      421 aatatcgatg ctggtggcaa tgttactgtt aatcaaggta gttttgctgg caccatcgaa
      481 ggtgctggtc agctcaccat tgcgcaaaac ggcagctacg tgctgtcggg ggcgcagtcg
      541 atggcgctaa ccggcgatat agtcgttgat gatggtgcgg tgctttcgct ggaaggcgac
      601 gcggcagatc tcgccgctct ccaggacgat ccgcagtcga tcgtgttaaa cggcggtgtg
      661 ctcgatctct ctgatttctc cacctggcag agcggcacat catacaatga tggccttgaa
      721 gtcagtggca gcagcggaac ggttatcggc agtcaggatg tggtagatct tgcaggtggc
      781 gacaatttgc atatccgcgg cgacgggaaa gatggcgtct acgtggtggt cgatgcgagc
      841 gacgggcagg taagtctggc aaacaataat agttatttgg gcacaacaca aatcgcctcc
      901 ggtacgctga tggtgagcga caactcgcag cttggagata cccactataa ccgccaggtt
      961 atctttaccg ataagcaaca agaaagcgtg atggagatta ctgccaatgt cgatactcgc
     1021 tctacgacga ctgagcatgg gcgtgatatt gaaatgcgcg ccgacggtga agtggcagtt
     1081 gatgcggggg tagacacgca gtggggcgca ctgatggctg acagcagcgg gcagcatcag
     1141 gatgagggta gcacatttac taaaacgggg gcgggtacgc tggagctgac cgccagcggt
     1201 acaacgcagt cggcagtacg tgtcgaagaa ggcaccctga aaggcgatgt tgcggatatc
     1261 tttccttatg cttcgtcact gtgggtcggt gatggggcga cgttcgttac tggcgcggat
     1321 caggatattc agtctatcga tgctacttcc agcggcacta tcgatatcag cgatggtacg
     1381 gttttgcgtc tgaccgggca ggatacttcc gtcgccctta atgcctcatt gtttaacggc
     1441 gatgggacgc tggtgaatgc taccgatggc gtgacgttga caggtgagct taataccaac
     1501 cttgaaactg acagcctgac ctatcttgcc gacgtgacgg ttaatggtga tctgaccaat
     1561 acgtccggtg cggttagcct gcaaaatggc gtcgctggcg atacgctaac ggtaaacggt
     1621 gattatactg gcggcggtac gctactgttc gacagcgaat taaacggcga tgactcggta
     1681 agcgatcaat tggtgatgaa cggtaatact gctggcaaca caactgtggt ggttaactcc
     1741 attacaggga ttggtgagcc gacatcgaca ggcattaaag tggttgattt cgcagctgat
     1801 cccacgcagt ttcaaaacaa tgcacagttc agtctggctg gcagtggcta cgtcaacatg
     1861 ggagcgtatg actacacgct agtggaagat aacaacgact ggtatctgcg atcgcaagaa
     1921 gtaacgccgc catcgccacc tgatccagac ccggacccaa cccccgatcc tgacccaaca
     1981 cccgatccaa tccccgctta ccagccggtg ctgaatgcca aagttggcgg ttatctcaat
     2041 aacctgcggg cggcaaatca ggcgtttatg atggagcgac gcgatcacgc tggtggcgat
     2101 ggtcagacgc tgaatttacg tgttatcggc ggacgttatc attacacggc ggcagggcaa
     2161 ctggctcagc aggaagacac ttctacggtg cagcttagcg gcggcttgtt tagcgggcgc
     2221 tggggcacgg atggcgagtg gatgcttggg gcggttggtg gctacagtga taatcagggc
     2281 gacagccgct cgaatatgac cggaactcgc gccgataacc agaaccacgg ttatgccgtt
     2341 gggctgacct caagctggta tcagcacggt aattagaagc agggggcctg gctggatagc
     2401 tggctgcaat acgcgtggtt taacaatgat gtttccgaac atgaagatgg cgtggatcgt
     2461 taccattcgt cggggattat cgcctcgctg gaagccgggt atcagtggtt accggggcgt
     2521 ggtgtggtga ttgaaccgca ggcgcaggtg atttatcagg acgtgcagca ggatgatttt
     2581 accgccgcta accatgcgcg cgtgtcacaa tcgcaggggg atgatattca gacgcggctg
     2641 ggtttacaca gcgaatggcg taccgcggtt ggtgtcacac caacattaga tctgaattat
     2701 tatcacgatc cccatgcgac ggaaattgaa gaagatggca gcactatcag tgacgatgcg
     2761 gtgaagcgac ggggtgaaat aaaagtggga gtcacgggca atatcagtca gcgagtgtcc
     2821 ctgcgcggca gcgtggcgtg gcagaaaggg agtgatgatt ttgcccagac ggcagggttt
     2881 ttgtcgatga cggtgaaatg gtaatcactg tctagtcggc acggttgccg gatgcggcgt
     2941 aaacgcctaa tccggcctac ggggagcatt tgtaggcctg ataagacgcg gcaagcgtcg
     3001 catcaggcat tggctcggcc aaacaacaac ctcacttatt ctgcgtgtgc agcatatagt
     3061 tcacatccac gccggggccg agtttaaaag tattagtgag cgggttgtaa tgtagcccag
     3121 ttatatgtcg ctctttaagg cttgtctgat ctacccagcc aagcagttct gccggtttaa
     3181 taaacttctt cacatcatgc gtgcctttgg gcaccatgcg caaaatatat tccgcgccaa
     3241 ccaccgccat cagccatgac ttgccgttgc ggttaagcgt cgagaaaaag acatcgccgc
     3301 ctggtttcac cagttgcgca caggctctga ccactgactg cggatcgggg acgtgctcca
     3361 gcatctccat gcaggtcacc acatcatact gcccggcatg ttttgccgcg tgctcttcca
     3421 cggtttcctg cacataatcc acctgaatgc cgctttccag cgcgtgcagt tttgccacct
     3481 gcaatggctc aaagcccata tccagaccgg tcaccgtcgc gccttcgcgc gccatactct
     3541 cggccagaat gccgccgcca caaccgacat cgagcacctt tttgccaaat aaaccgccag
     3601 cacgctcggc aatatagccc agacgcagcg ggttaatgcg gtgcaacggt ttgaactcac
     3661 cttcaagatc ccaccagcgg gaggcgacgg cttcaaattt agcgatctct tcgtggtcta
     3721 cgttatggtt ttccggcgat ttttcggcat tcattggcac ttctactccg taattggcaa
     3781 gacaaacgag tatatcaggc attggatgtg aataaagcgt ataggtttac ctcaaactgc
     3841 gcggctgtgt tataatttgc gacctttgaa tccgggatac agtagaggga tagcggttag
     3901 atgagcgacc ttgcgagaga aattacaccg gtcaacattg aggaagagct gaagagctcc
     3961 tatctggatt atgcgatgtc ggtcattgtt ggccgtgcgc tgccagatgt ccgagatggc
     4021 ctgaagccgg tacaccgtcg cgtactttac gccatgaacg tactaggcaa tgactggaac
     4081 aaagcctata aaaaatctgc ccgtgtcgtt ggtgacgtaa tcggtaaata ccatccccat
     4141 ggtgactcgg cggtttatga cacgatcgtc cgtatggcgc agccattctc gctgcgttac
     4201 atgctggtag acggtcaggg taacttcggt tccatcgacg gcgactctgc ggcggcaatg
     4261 cgttatacgg aaatccgtct ggcgaaaatt gcccatgaac tgatggccga tctcgaaaaa
     4321 gagacggtcg atttcgttga taactatgac ggcacggaaa aaattcccga cgtcatgcca
     4381 accaaaattc ctaacctgct ggtgaacggt tcttccggta tcgccgtagg tatggcaacc
     4441 aacatcccgc cgcacaacct gacggaagtc atcaacggtt gtctggcgta tatcgatgat
     4501 gaagacatca gcattgaagg gctgatggaa cacatcccgg ggccggactt cccgacggcg
     4561 gcaatcatta acggtcgtcg cggtattgaa gaagcttacc gtaccggtcg cggcaaggtg
     4621 tatatccgcg ctcgcgcaga agtggaagtt gacgccaaaa ccggtcgtga aaccattatc
     4681 gtccacgaaa ttccgtatca ggtaaacaaa gcgcgcctga tcgagaagat tgcggaactg
     4741 gtaaaagaaa aacgcgtgga aggcatcagc gcgctgcgtg acgagtctga caaagacggt
     4801 atgcgcatcg tgattgaagt gaaacgcgat gcggtcggtg aagttgtgct caacaacctc
     4861 tactcccaga cccagttgca ggtttctttc ggtatcaaca tggtggcatt gcaccatggt
     4921 cagccgaaga tcatgaacct gaaagacatc atcgcggcgt ttgttcgtca ccgccgtgaa
     4981 gtggtgaccc gtcgtactat tttcgaactg cgtaaagctc gcgatcgtgc tcatatcctt
     5041 gaagcattag ccgtggcgct ggcgaacatc gacccgatca tcgaactgat ccgtcatgcg
     5101 ccgacgcctg cagaagcgaa aactgcgctg gttgctaatc cgtggcagct gggcaacgtt
     5161 gccgcgatgc tcgaacgtgc tggcgacgat gctgcgcgtc cggaatggct ggagccagag
     5221 ttcggcgtgc gtgatggtct gtactacctg accgaacagc aagctcaggc gattctggat
     5281 ctgcgtttgc agaaactgac cggccttgag cacgaaaaac tgctcgacga atacaaagag
     5341 ctgctggatc agatcgcgga actgttgcgt attcttggta gcgccgatcg tttgatggaa
     5401 gtgatccgtg aagagctgga gctggttcgt gaacagttcg gtgacaaacg tcgtactgaa
     5461 atcaccgcca acagcgcaga catcaacctg gaagatctga tcactcagga agatgtggta
     5521 gtgacgctct ctcaccaggg ctacgttaag tatcagccgc tttctgaata cgaagcgcag
     5581 cgtcgtggcg ggaaaggtaa atctgccgca cgtattaaag aagaagactt tatcgaccga
     5641 ctgctggtgg cgaacactca cgaccatatt ctgtgcttct ccagccgtgg tcgcgtctat
     5701 tcgatgaaag tttatcagtt gccggaagcc actcgtggcg cgcgcggtcg tccgatcgtc
     5761 aacctgctgc cgctggagca ggacgaacgt atcactgcga tcctgccagt gaccgagttt
     5821 gaagaaggcg tgaaagtctt catggcgacc gctaacggta ccgtgaagaa aactgtcctc
     5881 accgagttca accgtctgcg taccgccggt aaagtggcga tcaaactggt tgacggcgat
     5941 gagctgatcg gcgttgacct gaccagcggc gaagacgaag taatgctgtt ctccgctgaa
     6001 ggtaaagtgg tgcgctttaa agagtcttct gtccgtgcga tgggctgcaa caccaccggt
     6061 gttcgcggta ttcgcttagg tgaaggcgat aaagtcgtct ctctgatcgt gcctcgtggc
     6121 gatggcgcaa tcctcaccgc aacacaaaac ggttacggta aacgtaccgc agtggcggaa
     6181 tacccaacca agtcgcgtgc gacgaaaggg gttatctcca tcaaggttac cgaacgtaac
     6241 ggtttagttg ttggcgcggt acaggtagat gactgcgacc agatcatgat gatcaccgat
     6301 gccggtacgc tggtacgtac tcgcgtttca gaaatcagca tcgtgggccg taacacccag
     6361 ggcgtgatcc tcatccgtac tgcggaagat gaaaacgtag tgggtctgca acgtgttgct
     6421 gaaccggttg acgaggaaga tctcgatacc atcgacggca gtgccgcgga aggggacgat
     6481 gaaatcgctc cggaagtgga cgttgacgac gagccagaag aagaataatt ttacttcttc
     6541 atgccaaaag ggagctatct cccttgtttg aattgaaaag tccaggctgc aaagtctggg
     6601 cttttgtcgt attagggcac ggtaaagttt ggctgtgccc gtaaaaaatg gctggctata
     6661 cacaaggaat gtggcaatga gtggtgaaaa aaaggcgaaa ggctggcggt tctatggtct
     6721 tgtaggtttt ggcgcaatag tactgctttc cgctggcgtc tgggcgttgc aatatgctgg
     6781 cagtgggcca gaaaaaacgt tgtcgccgct ggtgatgcac aacaatctgc aaatcgatct
     6841 caatgagccg gacctctttc tcgacagcga ctctctgagc cagcttccca aagatctcct
     6901 caccattccg tttctccacg atgttctgag tgaagatttc gttttctatt atcagaatca
     6961 tgccgatcgt ctgggcattg aaggcagcat tcgtcgcatt gtctatgaac acgatctcac
     7021 gctgaaagat aaactctttt cgtcactctt agatcag
//
LOCUS       DADKRT010000201         6932 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.204, whole genome shotgun sequence.
ACCESSION   DADKRT010000201 DADKRT010000000
VERSION     DADKRT010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6932
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.204"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(68..515)
                     /locus_tag="JQ356_003695"
                     /pseudo
     CDS             complement(68..515)
                     /locus_tag="JQ356_003695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312957.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
     gene            672..1601
                     /gene="metA"
                     /locus_tag="JQ356_003696"
     CDS             672..1601
                     /gene="metA"
                     /locus_tag="JQ356_003696"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HAY4623651.1"
                     /translation="MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAQTLAQEYFRDVEAGLDPEVPYNYFPHNDPQNTPRAS
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
     gene            1870..3471
                     /gene="aceB"
                     /locus_tag="JQ356_003697"
     CDS             1870..3471
                     /gene="aceB"
                     /locus_tag="JQ356_003697"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HAY4623652.1"
                     /translation="MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQR
                     NKLLAARIQQQQDIDNGTLPDFISETASICDADWKIRGIPADLEDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNP
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQS
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEV
                     MREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHQKMLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFGDAA
                     RLMEQITTSDELIDFLTLPGYCLLA"
     gene            3501..4798
                     /gene="aceA"
                     /locus_tag="JQ356_003698"
                     /pseudo
     CDS             3501..4798
                     /gene="aceA"
                     /locus_tag="JQ356_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418439.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
     gene            4981..6717
                     /gene="aceK"
                     /locus_tag="JQ356_003699"
     CDS             4981..6717
                     /gene="aceK"
                     /locus_tag="JQ356_003699"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HAY4623653.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     LAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDL
                     PLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSG
                     TLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILP
                     GKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRV
                     FKVIKDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMEL
                     LLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAA
                     ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASELWYSV
                     SPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRR
                     QRFSVRYGEMLF"
     gene            complement(6686..>6932)
                     /locus_tag="JQ356_003700"
     CDS             complement(6686..>6932)
                     /locus_tag="JQ356_003700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623654.1"
                     /translation="HARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILN
                     TLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR"
BASE COUNT         1690 a         1795 c         1782 g         1665 t
ORIGIN      
        1 gtgaaaaaaa tgccgggtgc gacgctggcg cgtcttctcc agcctgggca ggcacggcag
       61 gggcggctta ttcccccacg tacgccagat tcagcaacgg atacggtttc cccaaatcgt
      121 ccacctcaga gcgtcccgta accttaaaac ccaccttctt atagaaccca accgcctgct
      181 cattttgctc attaacgttg gttgtcagtt ccggtgccat cgagagcgca tgctccacca
      241 gcatccgacc cacgccgcag ccgcacacat caggatcgat aaacagcgca tccatatgct
      301 gcccacttaa caacataaac ccaaccggct gatcccgttc attaaccgcg atccacaacg
      361 gcgcttccgg caggaaggaa cgaactagct agcacctcca gctcggcccg atactctgct
      421 gataaaaaat cgtgtgtggc atcgacagat cgacaccaaa tcgcaacgag ttcctcccct
      481 tcctcatgcc gtgagcggcg aatactaata accattttct ctccttttag tcattcttat
      541 attctaacgt agtcttttcc ttgaaacttt ctcaccttca acatgcaggc tcgacattgg
      601 caaattttct ggttatcttc agctatctgg atgtctaaac gtataagtgt atgtagtgag
      661 gtaatcaggt tatgccgatt cgtgtgccgg acgagctacc cgccgtcaat ttcttgcgtg
      721 aagaaaacgt ctttgtgatg acaacttctc gtgcgtctgg tcaggaaatt cgtccactta
      781 aggttctgat ccttaacctg atgccgaaga agattgaaac tgaaaatcag tttctgcgcc
      841 tgctttcaaa ctcacctttg caggtcgata ttcagctgtt gcgcatcgat tcccgtgaat
      901 cgcgcaacac gcccgcagag catctgaaca acttctactg taactttgaa gatattcagg
      961 aacagaactt tgacggtctg attgtaaccg gtgcgccgct gggcctggtg gagtttaatg
     1021 atgtcgctta ctggccgcag atcaaacagg tgctggagtg gtcgaaagat cacgtcacct
     1081 cgacgctgtt tgtctgctgg gcggtacagg ccgcgctcaa tatcctctac ggcattccta
     1141 agcaaactcg caccgacaaa ctctctggcg tttacgagca tcatattctc catcctcatg
     1201 cgcttctgac gcgtggcttt gatgattcat tcctggcacc acattcgcgc tatgctgact
     1261 ttccggcagc gttgattcgt gattacaccg atctggaaat tctggcagag acggaagaag
     1321 gggatgcata tctgtttgcc agcaaagata agcgcattgc ctttgtgacg ggccatcccg
     1381 aatatgatgc gcaaacgctg gcgcaggaat atttccgcga tgtggaagcc ggactagacc
     1441 cggaagtacc gtataactat ttcccgcaca atgatccgca aaatacaccg cgagcgagct
     1501 ggcgtagtca cggtaatttg ctgtttacca actggctcaa ctattacgtc tatcagatca
     1561 cgccatacga tctacggcac atgaatccaa cgctggatta atcttctgtg atagtcgatc
     1621 gttaagcgat tcagcacctt acctcaggca ccttcgggtg ccttttttat ttccgaaacg
     1681 cacctcagga ggtgaataaa ttttattcac attgttatca ataagttatc aagcattttc
     1741 aattaaaatg gaaattgttt ttgattttgt attttaaatg agtagtctta gttgtgctga
     1801 acgaaaagcg cacaacgatc cttcgttcac agtggggaag ttttcggatc catgacgagg
     1861 agctgcacga tgactgaaca ggcaacaaca accgatgaac tggctttcac aaggccgtat
     1921 ggcgagcagg agaagcaaat tcttactgcc gaagcggtag aatttctgac tgagctggtg
     1981 acgcatttta cgccacaacg aaataaactt ctggcagcgc gcattcagca gcagcaagat
     2041 attgataacg gaacgttgcc tgattttatt tcggaaacag cttccatttg cgatgctgat
     2101 tggaaaattc gcgggattcc tgcggactta gaagaccgcc gcgtagagat aactggcccg
     2161 gtagagcgca agatggtgat caacgcgctc aacgccaatg tgaaagtctt tatggccgat
     2221 ttcgaagatt cactggcccc ggactggaac aaagtgatcg acgggcaaat taacctgcgt
     2281 gatgcagtta acggtaccat cagctatacc aatgaagcag gcaaaattta ccagctcaag
     2341 cccaatccag cggttttgat ttgtcgggta cgcggtctgc acttgccgga aaaacatgtc
     2401 acctggcgtg gtgaggcaat ccccggcagc ctgtttgatt ttgcgctcta tttcttccac
     2461 aactatcagg ctctgttggc aaagggcagt ggtccctatt tctatctgcc gaaaacccag
     2521 tcctggcagg aagcggcctg gtggagcgaa gtcttcagct atgcagaaga tcgctttaat
     2581 ctgccgcgcg gcaccatcaa ggcgacgttg ctgattgaaa cgctgcccgc cgtgttccag
     2641 atggatgaaa tccttcacgc gctgcgtgac catattgttg gtctgaactg cggtcgttgg
     2701 gattacatct tcagctatat caaaacgttg aaaaactatc ccgatcgcgt cctgccagac
     2761 agacaggcag tgacgatgga taaaccattc ctgaatgctt actcacgcct gttgattaaa
     2821 acctgccata aacgcggtgc ttttgcgatg ggcggcatgg cggcgtttat tccgagcaaa
     2881 gatgaagagc acaataacca ggtgctcaac aaagtaaaag cggataaatc gctggaagcc
     2941 aataacggtc acgatggcac atggatcgct cacccaggcc ttgcggatac ggcaatggcg
     3001 gtattcaacg acattctcgg ctcccgtaaa aatcagcttg aagtgatgcg cgaacaagac
     3061 gcgccgatta ctgccgatca gctactggca ccttgtgacg gtgaacgcac cgaagaaggt
     3121 atgcgcgcaa atattcgcgt agccgtgcag tacatcgaag cgtggatctc tggcaacggc
     3181 tgtgtgccga tttatggcct gatggaagat gcggcgacgg ctgaaatttc ccgtacctca
     3241 atctggcagt ggatccatca tcaaaaaatg ttgagcaatg gcaaaccggt aactaaagcc
     3301 ttgttccgcc agatgctggg cgaagagatg aaagtcattg ccagcgaact gggcgaagaa
     3361 cgtttctccc aggggcgttt tggcgatgcc gcacgcttga tggaacagat caccacttcc
     3421 gatgagttaa ttgatttcct gaccctgcca ggctactgcc tgttagcgta aaccaccaca
     3481 taactatgga gcatctgcac atgaaaaccc gtacacaaca aattgaagaa ttacagaaag
     3541 agtggactca accgcgttgg gaaggcatta ctcgcccata cagcgcggaa gatgtggtga
     3601 aattacgcga ttcagtcaat cctgaatgca ccctggcgca actgggcgcg gcgagaatgt
     3661 ggcgtctgct gcatggcgag tcgaaaaaag ctacatcaac agcctcggtg cactgactgg
     3721 cggtcaggcg ctgcaacagg cgaaagcggg tattgaagca gtctatctgt cgggatggca
     3781 ggtagcggcg gacgctaacc tggcggccag catgtatccg gatcagtcgc tctatccggc
     3841 aaactcggtg ccagctgtgg tggagcggat caacaatact ttccgccgtg cggatcagat
     3901 ccaatggtcc gcgggcattg agccgggcga tccgcgctat gtcgattact tcctgccgat
     3961 cgttgccgat gcggaagccg gttttggcgg tgtcctgaat gcctttgaac tgatgaaagc
     4021 gatgattgaa gccggtgcag cggcagttca cttcgaagat cagctggcgt cagtgaagaa
     4081 atgcggtcac atgggcggca aagttttagt gccaactcaa gaagctattc agaaactggt
     4141 cgcggcgcgt ctggcagctg acgtgacggg cgttccaacc ctactggttg ctcgtaccga
     4201 tgccgcggat ctgatcacct ccgattgcga cccgtatgac agcgaattta ttaccggcga
     4261 gcgtaccagt gaaggcttct tccgtactca tgcgggcatt gagcaagcga tcagccgtgg
     4321 cctggcgtat gcgccatatg ctgacctggt ctggtgtgaa acctccacgc cggatctgga
     4381 actggcgcgt cgctttgcac aagctatcca cgcgaaatat ccgggcaaac tgctggctta
     4441 taactgctcg ccgtcgttca actggcagaa aaacctcgac gacaaaacta ttgccagctt
     4501 ccagcagcag ctgtcggata tgggctacaa gttccagttc atcaccctgg caggtatcca
     4561 cagcatgtgg ttcaacatgt ttgacctggc aaacgcctat gaccagggcg agggtatgaa
     4621 gcactacgtt gagaaagtgc agcagccgga atttgccgcc gcgaaagatg gctatacctt
     4681 cgtatctcac cagcaggaag tgggtacagg ttacttcgat aaagtgacga ctattattca
     4741 gggcggcacg tcttcagtca ccgcgctgac cggctccact gaagaatcgc agttctaagc
     4801 aacaacaacc gttgctgact gtaggccgga taaggcgttc acgccgcatc cggcaatcgg
     4861 tgcacgatgc ctgatgcgac gcttgcgcgt cttatcatgc ctacagccgt tgccgaacgt
     4921 aggctggata aggcgtttac gccgcatccg gcaattctct gctcctgatg agggcgctaa
     4981 atgccgcgtg gcctggaatt actgattgct caaaccattt tgcaaggctt cgacgctcag
     5041 tatggtcgat tcctcgaagt gacttccggg gcgcagcagc gtttcgaaca ggccgactgg
     5101 catgctgtcc agctggcgat gaaaaaccgt atccatcttt acgatcatca cgttggtctg
     5161 gtcgtggagc aactgcgctg cattactaac ggccaaagta cggacgcggc atttttactg
     5221 cgcgttaaag agcattacac gcggctgttg ccggattacc cgcgcttcga gattgcggag
     5281 agctttttta actccgtgta ctgtcggtta tttgaccacc gctcgcttac tcccgagcgg
     5341 ctttttatct ttagctctca gccagagcgc cgctttcgta ccattccccg cccgctggcg
     5401 aaagactttc accccgatca cggctgggaa tctctactga tgcgcgttat cagcgacctg
     5461 ccgctgcgcc tgcgctggca gaataaaagc cgtgacattc attacatcat tcgccatctg
     5521 acggaaacgc tggggacaga caacctcgcg gaaagtcatt tacaggtggc gaacgaactg
     5581 ttttaccgca ataaagccgc ctggctggtg ggcaaactga tcacgccttc cggcacgttg
     5641 cccttcttac tgccgatcca ccagacggac gacggcgagt tatttattga tacctgcctg
     5701 acgacgaccg ccgaagcgag cattgttttt ggctttgcgc gttcttattt tatggtttat
     5761 gcaccgctgc ccgcagcgct ggtcgagtgg ctacgggaaa ttctgccagg taaaaccact
     5821 gctgaattgt atatggctat cggctgccag aagcacgcca aaaccgaaag ctaccgcgaa
     5881 tatctcgttt atctacaggg ctgtaatgag cagttcattg aagcgccggg tattcgtgga
     5941 atggtgatgt tggtgtttac gctgccgggc tttgatcggg tattcaaagt catcaaagac
     6001 aagttcgcgc cgcagaaaga gatgtctgcc gctcacgttc gtgcctgcta tcaactggtg
     6061 aaagagcacg accgtgtggg ccgaatggcg gacacccagg agtttgaaaa ctttgtgctg
     6121 gagaagcggc atatttcccc ggcattaatg gaattactgc tccaggaagc agcggaaaaa
     6181 atcaccgatc ttggtgagca gattgtaatt cgccatctct atatcgagcg gcggatggtg
     6241 ccgctcaata tctggctgga acaagtggaa ggtcagcagt tgcgcgacgc cattgaagaa
     6301 tacggtaacg ctattcgcca gcttgccgct gctaacattt ttcctggcga catgctgttt
     6361 aaaaacttcg gtgtcacccg tcacgggcgt gtggtttttt atgattacga tgaaatttgc
     6421 tacatgacgg aagtgaattt ccgcgacatc ccgccgccgc gctatccgga agacgaactt
     6481 gccagcgaac tgtggtacag cgtctcgccg ggcgatgttt tcccggaaga gtttcgccac
     6541 tggctatgcg ccgacccgcg tattggtccg ctgtttgaag agatgcacgc cgacctgttc
     6601 cgcgctgatt actggcgcgc actacaaaac cgcatacgtg aagggcatgt ggaagatgtt
     6661 tatgcgtatc ggcgcaggca aagatttagc gtacggtatg gggagatgct tttttgagta
     6721 aagcttccat ataatttttc tccgcaatgt atcgagggtt atccgtaaag ccaaagcttt
     6781 cagccatctt atttaatgta ttaaggatta attcagcaat aacccggtga ccaaattcaa
     6841 aagccaactc aaaggcagag tatttttgtg gcgctttgtg ttgccaaaaa tccataatat
     6901 cttcagcggt aaatccaaac aggcgtgcat gg
//
LOCUS       DADKRT010000202         6912 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.205, whole genome shotgun sequence.
ACCESSION   DADKRT010000202 DADKRT010000000
VERSION     DADKRT010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6912
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.205"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..988
                     /locus_tag="JQ356_003701"
     CDS             <1..988
                     /locus_tag="JQ356_003701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exonuclease"
                     /protein_id="HAY4623655.1"
                     /translation="PKWVKGIQTRDSVNQNQHESERNDQKAEQNSPNALQNEPETKQS
                     EPVAQQEPEKVCTACGQSGGGNYPDCGAVMDDATYQKTFDEENQVEVQENDPEEMEGA
                     EHPHKENAGSAQDHASDSKTGETADPLITVNGHHEITSTSRTCDHLMIDLETMGKNPD
                     APIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDE
                     IPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDV
                     RTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPSQADF"
     gene            1047..1250
                     /locus_tag="JQ356_003702"
     CDS             1047..1250
                     /locus_tag="JQ356_003702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HAY4623656.1"
                     /translation="MSSLFLTEDELLILTGCKYASHQRKWLMENELPFYTNRSGKPIV
                     SRDLFTCNKTLPPREVEPNFGAI"
     gene            1430..2275
                     /locus_tag="JQ356_003703"
                     /pseudo
     CDS             1430..2275
                     /locus_tag="JQ356_003703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142672.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            complement(2303..2392)
                     /locus_tag="JQ356_003704"
     tRNA            complement(2303..2392)
                     /locus_tag="JQ356_003704"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2356..2358),aa:Ser,seq:cga)
     gene            2486..3283
                     /gene="mtfA"
                     /locus_tag="JQ356_003705"
     CDS             2486..3283
                     /gene="mtfA"
                     /locus_tag="JQ356_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HAY4623657.1"
                     /translation="MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAE
                     RFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD
                     RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE
                     YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH"
     gene            3384..3459
                     /locus_tag="JQ356_003706"
     tRNA            3384..3459
                     /locus_tag="JQ356_003706"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3417..3419,aa:Asn,seq:gtt)
     gene            3773..>6912
                     /gene="yeeJ"
                     /locus_tag="JQ356_003707"
     CDS             3773..>6912
                     /gene="yeeJ"
                     /locus_tag="JQ356_003707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter adhesin YeeJ"
                     /protein_id="HAY4623658.1"
                     /translation="MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAA
                     AQGVVNAATQQPVPAQIAIANANTVPYILGALESAQSVAERFGISVAELRKLNQFRTF
                     ARGFNNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQ
                     AANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLF
                     FSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYL
                     KLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPSWPHLGGKLVYEQYYGDE
                     VALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAM
                     QKQLDPNEVAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLV
                     SSLQTKYALKGYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTA
                     EDVKGNLSNREQSMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPV
                     VGLVLSTRHEGVQDITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAV
                     VNIISVSSSRTHSSIKIDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNV
                     KPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKI
                     ATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTD
                     VNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGN
                     DSATMTATVRDAKGNLLNDVMVTFNVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYR
                     VTASVSSGSQANQQVNFIGDQSTAALTLSVPSGDITVTNTAPQHMTATLQDKNGNPLK
                     DKEITFSVPNDVASRFSISNSGKGMTDSNGVAIASLTGTLAGTHMITARLANSNVSDT
                     QPMTFVADKDRAVVVL"
BASE COUNT         1989 a         1628 c         1667 g         1628 t
ORIGIN      
        1 tccgaaatgg gtcaagggga tccagactcg cgattctgtg aaccagaacc agcatgaatc
       61 ggaacggaac gaccaaaaag cggaacaaaa cagcccaaat gcgttacaaa acgagccaga
      121 aacgaaacaa tccgaaccag tagcgcaaca ggaaccggaa aaagtctgca ccgcctgcgg
      181 tcagagcggt ggcggcaact accctgattg tggcgcggtg atggacgacg caacatacca
      241 gaaaacattc gatgaagaga atcaggttga agttcaggaa aatgatccgg aggaaatgga
      301 aggcgctgaa catccacaca aggagaatgc tggcagcgct caggaccacg ccagcgatag
      361 taaaactggc gagacggcag atcccttaat tacggtgaat ggtcatcacg aaatcacatc
      421 caccagcagg acgtgtgacc atctaatgat cgaccttgaa accatgggaa aaaatcctga
      481 tgccccgatc atctcaatag gtgcaatatt tttcgatccg caaaccggag atatgggacc
      541 cgaatttagt aagactatcg atctggaaac tgctggcgga gtcattgatc gggacaccat
      601 taaatggtgg cttaagcaat cacgcgaagc gcaatctgcc attatgaccg atgaaatccc
      661 gttagatgat gcactgttac aattgcggga atttatcgac gaaaactccg gtgaattttt
      721 tgttcaggtc tggggaaatg gagccaactt cgacaacacg attttgcgcc gttcatacga
      781 acggcagggg atcccctgcc cgtggcgtta ctacaacgat cgcgatgtac gcacaatcgt
      841 tgagctgggg aaagccatag acttcgatgc cagaacggct attccattcg aaggtgagcg
      901 ccataatgca cttgatgacg ctcgttacca ggcaaaatac gtttcagcta tctggcaaaa
      961 actgatcccg agtcaggctg atttttaatg ttcaacccta attgccgcta accgtatata
     1021 gttagcggcg gttatgagat atagctatga gcagcttatt tttaaccgaa gatgaattgc
     1081 taatattaac gggctgcaaa tatgcaagcc accagcgaaa atggttaatg gaaaacgagc
     1141 ttccgttcta taccaatcgt agtggcaaac cgattgtcag ccgggatcta tttacctgca
     1201 ataaaacttt accaccacgc gaggtagagc cgaattttgg tgcgatctga tgggaagacg
     1261 aaggaaaaat cctgagcacg aaaaattacc tccaaatgta tacccaaata aatatagtta
     1321 tgtatggaaa ccaacatcca gcgaatctgt aacactaacc gccatcaagg atggtttagc
     1381 tgctttatgg aaaaagtatg aggaaactgt aaataatcgc gatcgtgcaa tgacattcgg
     1441 tcgcttgtgg gaaaaattcc tcgccagcgc ctattacagt gacctcagtc caagaacaca
     1501 aaaagattat ctgcaacatc aaaaaagttg cttgccgtat tcggtaaggt gccggcagat
     1561 tccataaaac cagaacacat ccgtcgatac atggacaaga gaggggaaca gagtaaaacg
     1621 caagccaacc atgaagtccc gcgtttacag ttgggggtat gagcgagggt acgtgaaggc
     1681 taacccatgt gcaggtgtaa gtaaattcaa ggccaaaaac cgcgaacgat atgtaaccga
     1741 caaagaatac caggcagtat taagcgttgc acctcttcct gtttttatcg caatggaaat
     1801 tgcctatctg tgtgcagcga gggtttccga tgtgttatcg ctgaaatggg agcagattgg
     1861 aaacgacggg atctttatcc agcaagggaa aacaggaaaa aaacagataa aagcatggag
     1921 tccacgatta caggcggcga tcgaaaaagc aaaacagtta ccaacatccg cctatgtaat
     1981 cagcaatcaa tacggcaacc gatatatgta caaaggcttt aacgaaatgt gggtagaagc
     2041 aagaaatcgc gcaggcaaaa tttcaggtat tttaaccgac ttcacctttc atgatctgaa
     2101 ggcgaaagga atttcagact atgaaggaag cagtcgggat aagcaacttt tctctggtca
     2161 caaaaccgag gggcaagtgc taatctatga caggaaggtt aaagtttcac cgacacttga
     2221 tgtcccgtta cctgaaaata ttccaagtaa ttccacgtgt gatttttgtc actgacttaa
     2281 tgatgtataa gtgattgaat tttggcggag agagggggat ttgaaccccc ggtggagttg
     2341 cccccactcc ggttttcgag accggtccgt tcagccgctc cggcatctct ccgttcagat
     2401 ggttgccatg atgccaggaa atttggcatt ttaacagtcc ctgtccgtgc aattttgttc
     2461 aagtgacgag tttgcgagca aaacgatgat taagtggccc tggaaagtac aagaatcagc
     2521 acatcaaact gcccttccct ggcaggaagc actatcgatc ccccttttaa cgtgtctgac
     2581 ggaacaggaa caaagcaaat tagtcactct tgccgaacgt tttttacagc aaaagcggct
     2641 tgttccttta cagggctttg aactggattc attaagaagc tgccggatag cacttctatt
     2701 ttgcctaccc gttctggagt taggactgga atggctggat ggttttcatg aagtcttaat
     2761 ttatcctgcg ccatttgtgg tcgatgatga atgggaagac gatatcggtc tggtgcataa
     2821 ccaacgtatt gttcagtcag gtcagagctg gcagcaaggg cctatcgttt tgaactggtt
     2881 ggatatacaa gattcttttg atgcttctgg ttttaacctg attattcatg aagttgctca
     2941 taagctggac acccgtaacg gcgatcgcgc cagcggagtt ccctttattc cgttgcgtga
     3001 ggttgctggc tgggaacacg atcttcatgc tgcaatgaac aacattcagg aagaaatcga
     3061 attggttggc gagaatgcgg cgagcattga tgcttatgca gccagcgatc ctgctgaatg
     3121 ttttgccgta ctttctgaat atttctttag cgccccagaa ctttttgctc ctcgtttccc
     3181 ttcattgtgg caacgtttct gccaatttta tcaacaagat cctttgcaga gactgcatca
     3241 cgctaatgat acagactcgt tttcggcgac gaatgttcat taattaacaa ctttgcatat
     3301 taattaatca attgaaatga cttatgaaat ttagtgttga cagacaaggt accgctaagt
     3361 aatatgcgcc ccgttcacac gattcctctg tagttcagtc ggtagaacgg cggactgtta
     3421 atccgtatgt cactggttcg agtccagtca gaggagccaa attctaaaaa ttcgcttttt
     3481 tagcgcaatg tcactgacct tagttgaaca ttgtttttta acggatagcg ggtttttaac
     3541 atcttaagcg ccctcgacct ttatggttga gggcgttttg ctatgaacgc catcaccatt
     3601 ttcccctcga ttataaaact tgagttattc agtagtctcc cctcttgcaa ctcacaccca
     3661 aaactgccta acgaaaagtt attaattttc aatcatattg ctatcagtat ttacattttt
     3721 tcgctgtgct agaaagggcg catttatgtt agctcgttca gggaaggtaa gcatggctac
     3781 gaagaagaga agtggagaag aaataaatga ccgacaaata ttatgcggga tgggaattaa
     3841 actacgccgc ttaactgcgg gtatctgtct gataactcaa cttgcgttcc ctatggctgc
     3901 ggcagcacaa ggtgtggtaa acgccgcaac ccaacaacca gttcctgcac aaattgccat
     3961 tgcaaatgcc aatacggtgc cctacatcct tggagcgctg gaatcggccc aaagcgttgc
     4021 cgaacgtttc ggtatttcgg tggctgagtt acgcaaactc aaccagtttc gtacgtttgc
     4081 tcgaggtttt aataatgtcc gccagggtga tgaactggat gtcccggcac aagttagtga
     4141 aaaaaaatta accccgccgc cgggtaatag cagtgacaac ctcgagcaac agatagccag
     4201 tacttcacag caaatcgggt ctctgctcgc cgaagatatg aacagcgagc aagcggcaaa
     4261 tatggcgcgt ggatgggcct cttctcaggc ttcaggcgca atgacagact ggttaagccg
     4321 cttcggtacc gcaagaatca cgctgggcgt ggatgaagat tttagcctga agaactccca
     4381 gttcgatttt ctccatccgt ggtatgaaac gcctgataat ctctttttca gtcagcatac
     4441 tctccatcgt actgacgagc gtacgcagat taacaacggc ttaggttggc gtcatttcac
     4501 tcccacatgg atgtcaggca tcaacttctt tttcgaccac gatcttagcc gttaccactc
     4561 ccgcgccggc attggcgcgg agtactggcg cgactatcta aaattaagca gtaacggcta
     4621 tttgcgactg accaactggc gcagcgcacc tgaactggac aacgattatg aagcacgccc
     4681 ggccaatggc tgggatgtac gcgcagaaag ctggctaccc tcctggccgc accttggcgg
     4741 taaactggtc tatgaacagt attatggcga tgaagtggcc ctgttcgata aagacgatcg
     4801 gcaaagtaat cctcatgcca taaccgctgg acttaactat acccccttcc cgctgatgac
     4861 cttcagcgcg gagcaacgcc agggtaaaca gggcgaaaat gacacccgtt ttgccgtcga
     4921 ttttacctgg caacctggca gcgcaatgca gaaacagctt gacccgaatg aagtcgctgc
     4981 acggcgtagc cttgcaggca gccgttatga tctggtggat cgcaacaaca atatcgttct
     5041 ggaatatcgc aaaaaagaac tggttcgcct gaccctgaca gaccccgtga cagggaagtc
     5101 aggagaagtg aaatcactgg tttcgtcgct acaaaccaaa tatgccctga aaggctataa
     5161 cgtcgaagcc accgcactgg aagctgccgg tggcaaagtg gtcacaacgg gtaaagatat
     5221 tctggttacc ctgccggctt accggttcac cagtacgcca gaaaccgata acacctggcc
     5281 gattgaagtc accgccgaag atgtcaaagg caatttgtcg aatcgtgaac agagcatggt
     5341 ggtcgttcag gcacctacgc taagccagaa agattcctcg gtatcgttaa gtacccaaac
     5401 attgaacgcg gattcccatt caaccgccac actgactttt attgcgcatg atgcagcagg
     5461 taatcctgtt gtcgggctgg tgctctcgac gcgtcacgaa ggtgttcagg acatcaccct
     5521 ttctgactgg aaagataatg gtgacggaag ctatacccag atcctgacca caggagcgat
     5581 gtctggcacg ctgacgctga tgccacagct gaatggtgtg gatgcggcta aagcccccgc
     5641 cgtggtgaat atcatttctg tttcgtcatc ccgaactcac tcgtcaatta agattgataa
     5701 ggaccgttat ctctccggca atcctatcga ggtgacggta gaactgagag atgaaaatga
     5761 caaacctgtt aaggaacaaa aacagcaact gaataacgca gtcagcatcg acaacgtgaa
     5821 accaggagtc actacagact ggaaagaaac cgcagatggc gtctataagg cgacctatac
     5881 cgcctatacc aaaggcagtg gacttactgc gaagctatta atgcaaaact ggaatgaaga
     5941 tttgcatacc gctggattta tcatcgacgc caacccgcag tcagcgaaaa ttgcgacatt
     6001 atctgccagc aataatggtg tgctcgccaa tgagaatgca gcaaacaccg tctcggtcaa
     6061 tgtcgctgat gaaggaagca acccaatcaa tgatcatacc gtcacgtttg cggtattaag
     6121 cggatcggca acttccttca acaatcaaaa caccgcaaaa acggatgtta atggtctggc
     6181 gacttttgat ctgaaaagta gtaagcagga agacaacacg gttgaagtca cccttgaaaa
     6241 tggcgtgaaa caaacgttaa tcgtcagttt tgtcggcgac tcgagtaccg cgcaggttga
     6301 tctgcagaag tcgaaaaatg aagtggttgc tgacggcaat gacagcgcca caatgaccgc
     6361 gaccgtccgg gatgcaaaag gcaacctgct caatgacgtc atggtcactt tcaatgttaa
     6421 ttcagcagag gcgaaactga gccaaaccga agtgaatagc cacgacggga tcgccacagc
     6481 tacgctgacc agtttgaaaa atggtgatta tagggttacg gcctctgtga gctctggttc
     6541 ccaggctaat caacaggtga attttatcgg tgatcaaagt actgctgccc tgaccctcag
     6601 tgtgccttca ggtgatatca ccgtcaccaa cacagctccg caacatatga ctgcaacctt
     6661 gcaggataaa aatggcaacc cactaaaaga taaagaaatc accttctctg taccaaacga
     6721 cgtcgcaagt cggttctcga ttagcaacag cggaaaaggc atgacggata gcaacggggt
     6781 tgcaatcgcc tccctgaccg gcacgttagc gggcacgcat atgatcacgg ctcgtctggc
     6841 taacagcaat gtcagcgata cacagccaat gacgtttgtg gcggataaag acagagcggt
     6901 tgtcgttctg ca
//
LOCUS       DADKRT010000203         6801 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.206, whole genome shotgun sequence.
ACCESSION   DADKRT010000203 DADKRT010000000
VERSION     DADKRT010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6801
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.206"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            187..2103
                     /gene="dnaK"
                     /locus_tag="JQ356_003708"
     CDS             187..2103
                     /gene="dnaK"
                     /locus_tag="JQ356_003708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HAY4623659.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
                     VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            2192..3322
                     /gene="dnaJ"
                     /locus_tag="JQ356_003709"
     CDS             2192..3322
                     /gene="dnaJ"
                     /locus_tag="JQ356_003709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HAY4623660.1"
                     /translation="MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF
                     GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
                     CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
                     GVDTGDRIRLAGEGEAGQHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
                     GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN
                     EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
     gene            complement(3426..3635)
                     /gene="mokC"
                     /locus_tag="JQ356_003710"
     CDS             complement(3426..3635)
                     /gene="mokC"
                     /locus_tag="JQ356_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin MokC"
                     /protein_id="HAY4623661.1"
                     /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT
                     RKDLCEVHIRTGQTEVAVFTAYESE"
     gene            4164..5330
                     /gene="nhaA"
                     /locus_tag="JQ356_003711"
     CDS             4164..5330
                     /gene="nhaA"
                     /locus_tag="JQ356_003711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HAY4623662.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLET
                     PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
     gene            5396..6295
                     /gene="nhaR"
                     /locus_tag="JQ356_003712"
     CDS             5396..6295
                     /gene="nhaR"
                     /locus_tag="JQ356_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705976.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HAY4623663.1"
                     /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
                     RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
                     LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
                     FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI
                     LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
                     IQHPAVQRICNTDYSALFSPAAR"
     gene            complement(6333..>6801)
                     /locus_tag="JQ356_003713"
     CDS             complement(6333..>6801)
                     /locus_tag="JQ356_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623664.1"
                     /translation="RFNYNLNTILLVNLMTCGFEDQSIDTGRFVLSRINNENYQFHHI
                     RFDCIQGEQGELVFEPSDVEYYFEPVTIQESGTSILKNELENSEDGAGQVGFQLSNDG
                     TNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN"
BASE COUNT         1738 a         1601 c         1757 g         1705 t
ORIGIN      
        1 tctgcgcaaa agcacaaaaa atttttgcat ctcccccttg atgacgtggg ttacgacccc
       61 atttagtagt caaccgcagt gagtgagtct gcaaaaaaat gaaattgggc agttgaaacc
      121 agacatttcg cccctattac agactcacaa ccacatgatg accgaatata tagtggagac
      181 gtttagatgg gtaaaataat tggtatcgac ctgggtacta ccaactcttg tgtagcgatt
      241 atggatggca ccactcctcg cgtgctggag aacgccgaag gcgatcgcac cacgccttct
      301 attattgcct atacccagga tggtgaaact ctggttggtc agccggctaa acgtcaggca
      361 gtgacgaacc cgcaaaacac cctgtttgcg attaaacgcc tgattggccg ccgcttccag
      421 gacgaagaag tacagcgtga tgtttccatc atgccgttca aaattattgc tgctgataac
      481 ggcgacgcat gggtcgaagt taaaggccag aaaatggcac cgccgcagat ttctgctgaa
      541 gtgctgaaaa aaatgaagaa aaccgctgaa gattacttgg gtgaaccggt aactgaagct
      601 gttatcaccg taccggcata ctttaacgat gctcagcgtc aggcaaccaa agacgcaggc
      661 cgtatcgctg gtctggaagt aaaacgtatc atcaacgaac cgaccgcagc tgcgctggct
      721 tacggtctgg acaaaggtac tggcaaccgt actatcgcgg tttatgacct ggggggtggt
      781 actttcgata tttctattat cgaaatcgac gaagttgatg gcgaaaaaac cttcgaagtt
      841 ctggctacca acggtgatac ccacctgggt ggtgaagact tcgacagccg tctgatcaac
      901 tacctggttg aagaattcaa gaaagatcag ggcattgacc tgcgcaacga tccgctggca
      961 atgcagcgcc tgaaagaagc ggcagaaaaa gcgaaaatcg aactgtcttc cgctcagcag
     1021 accgacgtta acctgccgta catcactgca gatgcgaccg gtccgaaaca catgaacatc
     1081 aaagtgactc gtgcgaaact ggaaagcttg gttgaagatc tggtaaaccg ttccattgag
     1141 ccgctgaaag ttgcactgca ggacgctggc ctgtccgtat ctgatatcga cgacgttatc
     1201 ctcgttggtg gtcagactcg tatgccaatg gttcagaaga aagttgctga gttctttggt
     1261 aaagagccgc gtaaagacgt taacccggac gaagctgtag caatcggtgc tgctgttcag
     1321 ggtggtgttc tgactggtga cgtgaaagac gtactgctgc tggacgttac cccgctgtct
     1381 ctgggtatcg aaaccatggg cggtgtgatg acgacgctga tcgcgaaaaa caccactatc
     1441 ccgaccaagc acagccaggt gttctctacc gctgaagaca accagtctgc ggtaaccatc
     1501 catgtgctgc agggtgaacg taaacgtgcg gctgataaca aatctctggg tcagttcaac
     1561 ctggatggta tcaacccggc accgcgcggc atgccgcaga tcgaagttac cttcgatatc
     1621 gatgctgacg gtatcctgca cgtttccgcg aaagataaaa acagcggtaa agagcagaag
     1681 atcaccatca aggcttcttc tggtctgaac gaagatgaaa tccagaaaat ggtacgcgac
     1741 gcagaagcta acgccgaagc tgaccgtaag tttgaagagc tggtacagac tcgcaaccag
     1801 ggcgaccatc tgctgcacag cacccgtaag caggttgaag aagcaggcga caaactgccg
     1861 gctgacgaca aaactgctat cgagtctgca ctgactgcac tggaaactgc tctgaaaggt
     1921 gaagacaaag ccgctatcga agcgaaaatg caggagctgg cacaggtttc ccagaaactg
     1981 atggaaatcg cccagcagca acatgcccag cagcagactg ccggtgctga tgcttctgca
     2041 aacaacgcga aagatgacga tgttgtcgac gctgaatttg aagaagtcaa agacaaaaaa
     2101 taatcgccct ataaacgggt aattatactg acacgggcga aggggaattt cctctccgcc
     2161 cgtgcattca tctaggggca atttaaaaaa gatggctaag caagattatt acgagatttt
     2221 aggcgtttcc aaaacagcgg aagagcgtga aatcaaaaag gcctacaaac gcctggccat
     2281 gaaataccac ccggaccgta accagggtga caaagaggcc gaggcgaaat ttaaagagat
     2341 caaggaagct tatgaagttc tgaccgactc gcaaaaacgt gcggcatacg atcagtatgg
     2401 tcatgctgcg tttgagcaag gcggcatggg cggcggcggt tttggcggcg gcgcagactt
     2461 cagcgatatt tttggtgacg ttttcggcga tatttttggc ggcggacgtg gtcgtcaacg
     2521 tgcggcgcgc ggtgctgatt tacgctataa catggagctc accctcgaag aagctgtacg
     2581 tggcgtgacc aaagagatcc gcattccgac tctggaagag tgtgacgttt gccacggtag
     2641 cggtgcaaaa ccaggtacac agccgcagac ctgtccgacc tgtcatggtt ctggtcaggt
     2701 gcagatgcgt cagggtttct ttgccgtgca gcagacctgt ccacactgtc agggccgcgg
     2761 tacgctgatc aaagatccgt gcaacaaatg tcatggtcat ggtcgtgttg agcgcagcaa
     2821 aacgctgtcc gttaaaatcc cggcaggggt ggacactgga gaccgcatcc gtcttgcggg
     2881 cgaaggtgaa gcgggccagc atggcgcacc ggcaggcgat ctgtacgttc aggttcaggt
     2941 taaacagcac ccgattttcg agcgtgaagg caacaacctg tattgcgaag tcccgatcaa
     3001 cttcgctatg gcggcgctgg gtggcgaaat cgaagtaccg acccttgatg gtcgcgtcaa
     3061 actgaaagtg cctggcgaaa cccagaccgg taagcttttc cgtatgcgcg gtaaaggcgt
     3121 caagtctgtc cgcggtggcg cacagggtga tttgctgtgc cgcgttgtcg tcgaaacacc
     3181 ggtaggcctg aacgagaagc agaaacagct gctgcaagag ctgcaagaaa gcttcggtgg
     3241 cccaaccggc gagcacaaca gcccgcgctc aaagagcttc tttgatggtg tgaagaagtt
     3301 ttttgacgac ctgacccgct aacctcccca aaagcctgcc cgtgggcagg cctgggtaaa
     3361 aatagggtgc gttgaagata tgcgagcacc tgtaaagtgg cggggatcac tccccgccgt
     3421 tgctcttact cggattcgta agccgtgaaa acagcaacct ccgtctggcc agttcggatg
     3481 tgaacctcac agaggtcttt tctcgttacc agcgccgcca ctacggcggt gatacagatg
     3541 acgatcaggg cgacaatcat cgccttatgc tgcttcattg ctctcttctc cttgacctta
     3601 cggtcagtaa gaggcactct acatgtgttc agcatatagg gggcctcggg ttgatggtaa
     3661 aatatcactc ggggcttttc tctatctgcc gttcagctaa tgcctgagac agacagcctc
     3721 aagcacccgc cgctattata tcgctctctt taacccattt tgttttatcg attctaatcc
     3781 tgaagacgcc tcgcattttt gtggcgtaat tttttaatga tttaattatt taactttaat
     3841 ttatctcttt atcgcaatta ttgacgacaa gctggattat ttttgaaata ttgtcctaac
     3901 aaataacgcc gactgacaag aaattaatta ttacttttcc taattaatcc ctcagaaatc
     3961 ctcaccttaa gctatgatta tctgagctta gggtcactcg tcagcgctta cagccgtcaa
     4021 aaactcatct caccgctgat ggcgaaaatt ctacaaaggc tcgtaaaaaa cgaattattc
     4081 ctacactata atctgatttt aacgatgatt cgtgcggggt aaaatagtaa aaacgattta
     4141 ttcacctgaa agagaaataa aaagtgaaac atctgcatcg attctttagc agtgatgcct
     4201 cgggaggcat tattcttatc attgccgcta tcctggcgat gatgatggcc aacagcggcg
     4261 caaccagtgg atggtatcac gactttctgg agacgccggt tcagctccgg gttggttcac
     4321 tcgaaatcaa caaaaacatg ctgttatgga taaatgacgc gctgatggcg gtatttttcc
     4381 tgttagtcgg tctggaagtt aaacgtgaac tgatgcaagg atcgctagcc agcttacgcc
     4441 aggccgcatt tccagttatc gccgctattg gtgggatgat tgtgccggca ttactctatc
     4501 tggcctttaa ctatgccgat ccgattaccc gcgaagggtg ggcgatcccg gcggctactg
     4561 acattgcctt tgcacttgga gtgctggcgc tgttgggaag tcgtgttccg ttagcactga
     4621 agatcttttt gatggctctg gctattatcg acgatcttgg ggccatcatt atcatcgcat
     4681 tgttctacac taatgactta tcgatggcct ctcttggcgt cgcggctgta gcaattgcgg
     4741 tactcgcggt attgaatctg tgtggtgtac gccgcacggg cgtctatatt ctggttggcg
     4801 tagtgttgtg gactgcggtg ttgaaatcgg gggttcacgc aaccttggcg ggggtaattg
     4861 tcggcttctt tattcctttg aaagagaagc atgggcgttc tccagcgaag cgactggagc
     4921 atgtgttaca cccgtgggtg gcgtatctga ttttgccgct gtttgcattt gctaatgctg
     4981 gcgtttcact gcaaggcgtc acgctggatg gcttgacctc cattctgcca ttggggatca
     5041 tcgctggctt gctgattggc aaaccgctgg ggattagtct gttctgctgg ttggcgctgc
     5101 gtttgaaact ggcgcatctg cctgagggaa cgacttatca gcaaattatg gcggtgggga
     5161 tcctgtgcgg tatcggtttt actatgtcta tctttattgc cagcctggcc tttggtagcg
     5221 tagatccaga actgattaac tgggcgaaac tcggtatcct ggtcggttct atctcttcgg
     5281 cggtaattgg atacagctgg ttacgcgttc gtttgcgtcc atcagtgtga caggacggtt
     5341 taccggggag ccataaacgg ctcccttttc attgttatca gggagagaaa tgagcatgtc
     5401 tcatatcaat tacaaccact tgtattactt ctggcatgtc tataaagaag gttccgtggt
     5461 tggcgcagcg gaggcgcttt atttaactcc acaaaccatt accggacaga tccgggctct
     5521 ggaagagcgc ctgcaaggca aattatttaa gcgcaaggga cgtggtctcg aacccagcga
     5581 gctgggagaa ctggtctatc gctatgccga taaaatgttc accttaagcc aggaaatgct
     5641 ggatattgtg aactatcgca aagaatccaa tttattgttt gacgttggcg tggctgatgc
     5701 actttccaaa cgcctggtca gtagcgtgct gaatgctgca gtggtagaag gcgagccgat
     5761 tcatcttcgc tgcttcgaat ccacccacga aatgctactg gagcaattaa gccagcataa
     5821 actggatatg atcatttccg actgtccgat agactctacg cagcaggaag gcctgttctc
     5881 cgtgagaatt ggcgaatgtg gcgtgagttt ctggtgtaca aatccaccac cagaaaaacc
     5941 gttcccggct tgtctggaag aacggcgact tttgattcct gggcgacgtt caatgttagg
     6001 gcgcaaattg cttaactggt ttaactccca gggattaaac gtagaaatcc tcggcgagtt
     6061 tgatgatgcc gcgttgatga aagcttttgg tgcaatgcac aatgcaatct tcgttgcccc
     6121 aacgctttat gcatatgact tttatgccga taaaactgtc gtagaaattg gtcgcgtcga
     6181 gaatgtgatg gaagagtacc atgctatttt tgctgagcgg atgattcagc acccggcggt
     6241 acagcgaatc tgcaatacgg attattctgc gctttttagt ccagcggcgc gttaatcggc
     6301 agctccccca aagttaaagt ggaggagata gattagttgt acataaccac gattttgact
     6361 cggctcatta tttgcccgct tgagacatta tttccatatg tacgcgggcg aataaataga
     6421 ggaatctgat tacttccttc atggggatgc tgaaaagagt agtaattgct tttaccatac
     6481 tggatttcat tcgtaccatc attggagagt tgaaagccta cttgacccgc accgtcctca
     6541 ctgttttcta actcattttt taatatgctg gttcctgact cctgtatcgt cactggttca
     6601 aagtaatatt caacatcact gggttcaaaa actaattcac cttgctcgcc ctggatgcag
     6661 tcaaatctta tatgatgaaa ctgataattt tcattattga tacgagacag tacaaatcgt
     6721 ccagtgtcga tggattgatc ttcaaaacca caggtcatta aatttaccag taaaatagta
     6781 tttaaattat aattaaagcg g
//
LOCUS       DADKRT010000204         6800 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.207, whole genome shotgun sequence.
ACCESSION   DADKRT010000204 DADKRT010000000
VERSION     DADKRT010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6800
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.207"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            174..902
                     /gene="mpaA"
                     /locus_tag="JQ356_003714"
     CDS             174..902
                     /gene="mpaA"
                     /locus_tag="JQ356_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415842.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
                     /protein_id="HAY4623665.1"
                     /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI
                     LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP
                     AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
                     ACIEDPRHSELGEWLAQAFELPLVTSVGYETPSSFGSWCADLNLHCITAEFPPISSDE
                     ASEKYLFAMANLLRWHPKDAIRPS"
     gene            complement(877..1791)
                     /gene="ycjG"
                     /locus_tag="JQ356_003715"
                     /pseudo
     CDS             complement(877..1791)
                     /gene="ycjG"
                     /locus_tag="JQ356_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001338538.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
     gene            1961..2467
                     /gene="tpx"
                     /locus_tag="JQ356_003716"
     CDS             1961..2467
                     /gene="tpx"
                     /locus_tag="JQ356_003716"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HAY4623666.1"
                     /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
                     VITLSTFRNAEFLQAFGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
                     AALAVLKA"
     gene            complement(2511..4052)
                     /gene="tyrR"
                     /locus_tag="JQ356_003717"
     CDS             complement(2511..4052)
                     /gene="tyrR"
                     /locus_tag="JQ356_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HAY4623667.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
                     ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
                     DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
                     ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
                     QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
                     VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKNEE"
     gene            complement(4200..5261)
                     /locus_tag="JQ356_003718"
     CDS             complement(4200..5261)
                     /locus_tag="JQ356_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HAY4623668.1"
                     /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDE
                     APEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL
                     GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
                     QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREICRSAAESTLMI
                     AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
                     EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR
                     QLIGQVKETLQKGKTPSEK"
     gene            complement(5258..6655)
                     /locus_tag="JQ356_003719"
     CDS             complement(5258..6655)
                     /locus_tag="JQ356_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HAY4623669.1"
                     /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
                     SEIRLALRFKSNDSLLRHFKDTSTLYLVIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
                     NGQRGEWSVKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
BASE COUNT         1625 a         1936 c         1662 g         1577 t
ORIGIN      
        1 cgacttacat ctaagtcagc ataattctaa tatctgcaca tcaataaaaa tgcaaacaac
       61 ttccggcaaa aaaagtgata caagatcgat gacatagcgt tgaagaaaag gatttgataa
      121 tccgcaaaat ttgcacaaca ctgcctgtaa tacttcctga accagagacg atcatgaccg
      181 taacccgccc acgcgccgaa cgcggcgcat ttccgcccgg aacagaacat tacggacgtt
      241 cattattggg cgcgccgtta atctggtttc ctgcccctgc agccagccgc gaaagtggtt
      301 tgattctggc tggcactcac ggtgatgaaa actcttcggt cgtcacgctc tcctgtgctc
      361 tgcggacgtt gacaccttct ttgcgccgcc atcatgtggt gctgtgtgtg aatcctgacg
      421 gctgccagct ggggttacgg gccaatgcta atggtgtgga tttaaacaga aactttccgg
      481 cggcgaactg gaaggaaggt gaaacggttt atcgctggaa cagcgccgct gaagaacgtg
      541 atgtcgtatt actgacaggt gacaaacctg gctcagaacc tgaaacccag gcgctgtgcc
      601 agcttataca ccgcattcaa cctgcctggg tggtctcatt ccacgatcca ctggcctgta
      661 ttgaagatcc cagacacagc gaattaggcg aatggctggc ccaggcgttt gaattgcctc
      721 tggtaaccag cgtcggttat gaaacgccta gctctttcgg cagttggtgt gcagatctca
      781 acttgcattg catcaccgca gagtttccgc ccatctcctc cgacgaagcc agcgaaaaat
      841 atctctttgc gatggcaaac ttgctgcgct ggcatcctaa agatgcaatt cgcccgtcgt
      901 gaactgaagc gccggttcca catctaccgc cagccaggtc ggtccgtcaa gatcggcgaa
      961 actgacctgc ggcaccagcg gtaaagcggc gctaatggca cgagaggtac acaacatgca
     1021 gcccagcatc agactgaaac cttgtgcacg cgcttcagtc gccagcgcca gcgcttccgt
     1081 cagaccaccg gttttatcga gcttaatgtt aaccatctca tagcgccctt tcagcgcctt
     1141 cagattgcta cgtgtatgac aactctcatc agcacaaatc ggcaacggat gaataaaatt
     1201 ctccagcgcc gcatcgtcct gcgcaggaag gggttgttca agcatcgcaa cgcctaaatc
     1261 cgccaatagc tggcaacgcg ccgccaaccc ttatgcacgc caggattcat ttgcatcaac
     1321 gatcagcgtc gcatcgggca cagctgtgcg aattgccacc atccgctcac taataagatg
     1381 gttatccagc ttcactttca gtaatttcgc gcctgcctgc cagagtgttg atgcactatt
     1441 ggccatctga tcaggcgtac cgatgactac cgtctgtgca gtgataactg tctcgggaag
     1501 cgttatgccg atcaaatcag ccagcgattg ctgctgtttt cgcgcggcca gatcccacaa
     1561 tgcacaatcc agcgcattac gtgctgcgcc ggcagggaga attttttgca actcctcccg
     1621 tgtcagccct ttctctaatt gcgacacgac gctcataatt tgcgccatta ccgaggcatc
     1681 actttctcca taacgcggat acggcgtgca ttcgccggtg cctttaatac cctcttcttc
     1741 cagttcaacc accaccacgc gcgcttcact gcgacttccc cgggcaatca caaacggggt
     1801 atgtaagggc taggcttcct caaatacctt aacggttctc atctttactc cttgttgtcg
     1861 cggtggtctg cggattaagc gcaaatagcg tttgctgtgt tattgacagt tagcataaac
     1921 taggtgtgac gttaactata tgtaaacagg aaagataatc atgtcacaaa ccgttcattt
     1981 ccagggcaac ccggttacag tcgccaattc catcccgcag gcgggtagca aagcgcagac
     2041 ttttactctc gtggcaaaag atctgtctga cgtcaccctc ggtcagtttg cgggtaaacg
     2101 caaagtgctg aacattttcc cgagtattga taccggtgtt tgcgccgcat cagtacgtaa
     2161 gtttaaccaa ctggcaaccg agatcgacaa caccgttgtg ctgtgtattt ctgccgatct
     2221 gccgttcgcc cagtctcgtt tctgcggcgc agaaggtctg aacaacgtta tcaccctctc
     2281 cactttccgt aacgctgaat ttctgcaagc cttcggtgtg gcaattgctg atggcccact
     2341 gaaaggtctg gcagcgcgtg ccgttgtggt tattgacgaa aatgacaatg tgattttcag
     2401 ccagctggtg gatgaaatca ccaccgagcc ggattacgaa gcagctctgg ctgtactgaa
     2461 agcataagtt aatatgcctg atggtgttgc accatcaggc atattcgcgc ttactcttcg
     2521 ttcttcttct ggcttaagcc atattcccgc aacttattgg caatcgcggt atgtgaaacg
     2581 ccgagacgtt ttgccagttt gcgcgtgctg ggataattgc gataaagctg ggttaatacc
     2641 gagcgttcaa aacggctggt gatttcgtcc agcgaacctt ccatcgcatc ttcgcccacg
     2701 gctaccgttg cggcgtcata atccggcaac aaaatatcct gtggacgcag ctcataaccg
     2761 tccagttgtg tcagtgcgcg atatatagcg ttctttaact gccgcacatt tcccggccac
     2821 gcataacgcg taagtacagt attcaggtca gcggccagtt tcggacgcgg cacgccctgc
     2881 tcgtcggcaa agcgggcgac gaacagctca gttaacggca tgatgtcctg cggacagtca
     2941 cgtagcggcg gcagattgag cgtcaacacg ttcagacgat aatagagatc ttcacggaac
     3001 atgccttttt gcaccagttc gaccagattc ttctgcgtag cgcaaatcac ccgcacatcg
     3061 acatgcacct catggtcttc gccaacccga cggaaagtgc catcattaag aaaacgcagt
     3121 aatttcgcct gcatccgtgg tgacatttcc cctatttcat ccaacagcac cgaaccaccg
     3181 ttcgcctgct caaagaatcc tttcttccct tccggagcat gaccaaacag ttcactctcg
     3241 accgcatctt ccggtataga cgcacagttc agcgccaggt aaggtttgcc cgctctgggg
     3301 cttgcctgat ggcaggcgta ggcaaagaga tctttacctg tacctgtgtc acccgtaatc
     3361 agcagcggcg cgcttagcat cgccagtttc tgcgcctgtt cgacaacatg cttcattttc
     3421 gggctgacgg cgacaatttg actgaaggcg ctgacgtcct gggcggcgac attttgcaac
     3481 tggcggccca tacgaatcgt tgatcgcaac atcaccaccg caccggtcag gacgtgttga
     3541 tcattttcat cctgaagata aacaggcgta atctccatca ggaaattctg cccattaata
     3601 acgacatgct cgttatgcga atcttgcggt tcgctttcca gccaacgtaa aaaattaaag
     3661 ccgttaatca attgtgcggc ggtatggttg cgcaggcgat ccaatttttg cccaaaaagc
     3721 tgacagctcg ccgggttcgc catatccact ttgcttttca tatcgacaga gagcacaggt
     3781 tcgggcaacg cctccagtaa cgcgctcaac gccagatgct cacgttcgga aggcatccac
     3841 gggacagtac gcacatcggt aacacctgca atacggcgta tttcggccat cagactgctg
     3901 aaactctcaa actccagttc agcaaaattg aggtagattc gcccaatggg atcaatctca
     3961 ataccgcgta aatcaatgcc tcttagcacg agtagatcga gtaattcgcg ggtcagaccg
     4021 agtcggtctt cacaaaagac ttccagacgc atgggaacct tcacctgaaa aaagaacaat
     4081 taatatgatg atatgacact atttggatag caggaaggtt tctgtcaaca atcattgaca
     4141 caaagacgga aaaacgggca cttcggcgta aagatatccg gtcagcaccc gatattgcat
     4201 tatttttcgc tgggcgtttt gcctttttgc agcgtttctt tcacctgacc gataagctga
     4261 cgacggaaat ccccgaggcg aggtttgtca tcgtcaatcc acggcagcgg gcggcaaagc
     4321 tccatagctt taatcccgag tcgtgccgtc agaagtccag caccaattcc ctgagctgcg
     4381 cgggtagaca aacgagcagc gagatcttgc gacatccagt ccatccccac ttcgcgcacc
     4441 agttcgctgg ctccggcaaa agcgatattc agcaatacca gcttaaacag acgcaaacgg
     4501 ctgtaatacc ccagttcaat gccatacagc gtggcgatgc gattaattaa acgcagattg
     4561 cgccaggcga taaacgccat atcgaccaac gccagcgggc tgaccgcaat catcaacgtt
     4621 gattccgccg ccgaacggca gatttcgcgc cgcgcctggg catctaaaac tggctggacc
     4681 aaatgcgcat acaaactgac cacttcacgg tcgttttgcg tttcatggat tgaggcatac
     4741 cagcgttgca gcgctggatg agactgatca atacccgcct gctgcgccag tttttcgcaa
     4801 aatgcgcggc ctttgcccgt gccgtggctg tgcaacaaat cgcgcgcttc gtcgcgttca
     4861 tgggcgcgct gtcgcaagcg ccataagcgc cgccactctg ttaccacaga acctacgcca
     4921 gcgccgataa tcaatgcccc agcggcacat ccacccagcg ccacccagtc ctgagtttgc
     4981 caggcattca ttgtccactg tacaccctgc ccgacaacgc ttgcgccaaa cagagccagc
     5041 ccgcccatca ccattttgcg ccacaggctg cgtttcggac gtaacgctgc atccattacc
     5101 gcttcaactt gcccctcttc ttcaggcgct tcatcgagcg tggccggggc aaaattttgc
     5161 gcctgatttt cgtcaaaggt ctgctgcgcc ctgaattttg gattctgatc gacctccagc
     5221 ggaccgtcga aatcaatacg tggttttaac ggttcggtca tcgcaattta tctcctatta
     5281 aaaattccag cgcggcatca agacgaatat gcggcagcgg tttgtcgaca tccatcacct
     5341 gcgggcgaaa cgcttcaaac tggaaccctt gtttgtccca gaacgcctga ccgggcaaac
     5401 gcgcaggaac ttcaccggga taaacggtga gtggcgcacc atcgctgagc cggttaccgc
     5461 gcaatgccgg aattttctcg ccgttgacgt caataatgcc gctggtggtc gcctgcaccg
     5521 aggccagccc caggcaatcc atactaatcc cttcaaacgc cgcattttgc caggcatcct
     5581 gaatcagttg ttgcagtaat gaaaccatat tggcgtgctg atcgatggtc acatggtccg
     5641 ctttagtggc agcaaacaat agcttatcga taaccggcga aaacaaacgc cggaacaagg
     5701 tacgctgccc gtagtggaaa ctttgcatca gctgcgtcag tgccagacgc atatcattaa
     5761 atgcctgtgg cccactgttg agaggttgca ggcaatcaac cagcacaatc tggcggtcaa
     5821 agcgcagaaa atgattctta tagaacccct tcaccacctt ctcgcagtaa taattaaacc
     5881 gctcgcgcag cattccggca ttggtgtgct tatcggcctg cgccagtttg gactcgcccc
     5941 aggtatcgac atccggccac gggaagaatt gcagcgcggg cgcacctgcc atatctcctg
     6001 gcaagacaaa gcgccctggc tgaataaagt gcagcccctg ctgtttacag tggtggagat
     6061 aatcggtcca cgcggcggca atgtctgcca gccggttttc gtcggcaggt gctagcgggt
     6121 ccagcccttc gcacatcatt cgccatttga ccgaccattc gccgcgctga ccattgagta
     6181 agcccgtcat ctggcgtgac cagcttaaat agtcctgcgc cagcatcggc aggtcgagca
     6241 accattcgcc gggataatcc acaatcacca gatacagcgt ggaggtgtcc ttgaagtggc
     6301 gtagcagcga atcgttcgat ttaaaacgta gcgccaggcg gatttcactg acgccgcgcg
     6361 ttggcgtcgg ccaggcggga ggatcgccat ataactgcgc cagtccttca tcatatgtga
     6421 agcgcggaat gccaaagtca cgctgaggaa tgcgttttac gcccagcagg cgctcttcac
     6481 gcaccgcgct taacagcggc aagcgtgctc cggcgtgaat attgagcaac tgattgacca
     6541 tagcagtgat aaacgctgtt ttgccgctgc ggcttagtcc ggttacggcg aggcgcagat
     6601 gtctgtcgac accccgattc accagcgcat taagttcatt tttaagtcgc ttcattgctg
     6661 tcctgtgctg ctctgaagac cagaaaaaaa tcattcgtaa ggatatgaat gtgggggcca
     6721 ggccattgat tatcaactgc ccgtgttgtc atcgacgggc gaactccata agatgtgcag
     6781 cattcacgtt cggacggagt
//
LOCUS       DADKRT010000205         6759 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.208, whole genome shotgun sequence.
ACCESSION   DADKRT010000205 DADKRT010000000
VERSION     DADKRT010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6759
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.208"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..297
                     /locus_tag="JQ356_003720"
     CDS             <1..297
                     /locus_tag="JQ356_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY4623670.1"
                     /translation="LPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVT
                     FANVFTIIPPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD"
     gene            complement(448..3771)
                     /gene="mscM"
                     /locus_tag="JQ356_003721"
     CDS             complement(448..3771)
                     /gene="mscM"
                     /locus_tag="JQ356_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HAY4623671.1"
                     /translation="MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPE
                     VVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERTREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQAASQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVA
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(3793..4761)
                     /gene="psd"
                     /locus_tag="JQ356_003722"
     CDS             complement(3793..4761)
                     /gene="psd"
                     /locus_tag="JQ356_003722"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HAY4623672.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            complement(4858..5910)
                     /gene="rsgA"
                     /locus_tag="JQ356_003723"
     CDS             complement(4858..5910)
                     /gene="rsgA"
                     /locus_tag="JQ356_003723"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HAY4623673.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            6005..6550
                     /gene="orn"
                     /locus_tag="JQ356_003724"
     CDS             6005..6550
                     /gene="orn"
                     /locus_tag="JQ356_003724"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HAY4623674.1"
                     /translation="MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDSFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
BASE COUNT         1563 a         1817 c         1813 g         1566 t
ORIGIN      
        1 cttccttacc tgttcctcgc gctggctttc ccattcttta aagcacgtca ggatctcgac
       61 agaccatttg tgattttcaa aacgcgtatg tcggcaatga ttgcgacggt ggttgtcgta
      121 ctggtggtga catttgcgaa cgtcttcacc attattccgc ctgtggttga agccggagac
      181 tgggacagca cattgtggat gattggcggc cctgtcttct tctcgctgtt agcgatggcg
      241 atttaccaga actattgcag tcgcatggcg aataaacctg agttagctct cgactgatca
      301 tatgaaatcc tgcaactcat cgtctctccg gcgatgagtt gtcaggaagt aatgcgtatg
      361 gatgatactc tccagggccg gtgataactg aagatgatgt taagctgcta aatgagccac
      421 gttgacatca tttggcagct tcatgcatta caaacttccc gcctgacgac ctttgcccgc
      481 agacgtcagc gttctccccg tttgtttacc gttgaggctt tccagacgca tctggaaggg
      541 cgggaatggc atatcgatac cgtgggcatg gaagccagcc agaatcagct ggtggatctc
      601 atggcgtagc ggcatacggt gacccatctc agcggcataa atacgcagct cgaaaatctg
      661 aatcccttgt tgcagatcca ccaggaagac ttccggtgcc gggttgtcga tcaccagcga
      721 gcagcgacgc gctgcggtga gcaggatttc cgtcacttct tcactgttgg catcagcagg
      781 ggccggaatc gtcaacacta cgcgcgtaac cgagtcagag agcgaccagt tgataaactg
      841 ctcggtaata aacgccttgt tcggcacgat tatctcttta cggtcccagt cgctgatggt
      901 ggtggcgcgg gtgttaattt tcgtcacgct accggtgaga tcgcgaattg tcaccgtatc
      961 gccaatgcga atcggttttt cgaacaggat aatcagacca gagataaagt tggcgaaaat
     1021 ttcctgcaaa ccaaaaccga gaccaacacc gagcgcggcg accagccact gcaatttcga
     1081 ccattcaata ccaatcatcg agaagccgac cagcccgcca atcagcatca gcagatattt
     1141 ggtgatggtg gtgatggcgt agcctgtacc cggcgttaaa tccaggtgct gcaaaatcgc
     1201 cagttccagc agcgcgggca ggttgcgcac cagctgcgtg gtgatgataa acaccagaat
     1261 ggcaatcagc accgcaccga gggtaattgg ctccagactt tctacgcctt gtaccgtgga
     1321 ggtgacatcc cacagcgaaa tattttcgag gaagccgaaa gcggaatgga tttctgacca
     1381 cagcacaatg acagaaagca gggcgatcaa catcaaaatt gagcgcacca gccgcaagga
     1441 ttgcgcactg atggcatcga gatcgacttc gctttcatcg acttcaattg ctccttccgg
     1501 gctactgtga tgatgcgctt cctcttcgcc acgcgcacgt tgcgctaaca tctctgcccg
     1561 gcgatgcttc gcccggtcaa acgccagcct gcggcgctgg atcagcatcc agcggcggat
     1621 aacgtgataa accaccagta gcaggaacca gatggcaacc gaggtttcaa gcctcgctaa
     1681 cagcgcctgt gccgttgcca gataacccac agccgacgcc agaatggcaa ccaacggcgc
     1741 gccaatcatc atgttccaca gcatatggtt ggtaatgttg tcgccgctgc cctctttgtt
     1801 gagatacagt gggatcccgg cctttttcag gctgagggtg accaccgcca gcgcaccgca
     1861 aatgaggata aagcaaagcc gtcccagcga accggagaat tcacggtcgt cgaggttatc
     1921 gaacatcatc agcgccataa tcagcggcac aataagcccg atgctcatca ggtagtagcg
     1981 catcccacgg gaaacacgtt cgcgcggcca gccaaaatga gcgataaaca agccgttcgg
     2041 gcgggcaaag gtggcgcaaa tcatcactac ccacagcagc ggcacggtag ccgttacacc
     2101 atcgccaatc gcgaccgcca gcggataagg ccacgcctcg cgcaagccgt aacccagcgt
     2161 catccacagc accggtaacg gtgacgcgac gagaatcgac cagaaaagag tgcgcaacgt
     2221 cagccagaag tgatcctgag tcactttgcc aactttcgcc gccgaacgtt caagaaaacg
     2281 ggtgaaatag cggcgcgagt aaatactgca accgaccaga atcaacgcgc caaacagcgg
     2341 caaaattgtc tctttgctgg tcagcatcat cacactggct ttgcccaact gactgaaggt
     2401 gtccagcgaa atgagacgac gcagatcctg ggcgatttcc agcggccagg cgatggtcat
     2461 cgggcgcacg tcagaggtcc agaacagata gcggtgcgtt gcttcgttca cctctttcag
     2521 cgcatcctcc agttgcccgt tggagacttt cagcttggtc agttccaata gtagcgtgtc
     2581 gccaccctgc aacaatgagt tcagcaactc acgctgagtg cgcagttgtg cttccagaat
     2641 acggttttgc tcggcggtca gcggctgacc gtcggcctga tggatttgcc gtagcagcgg
     2701 ctgtttatta agcagatcct cataacgtaa ccgttgcaca cgcaactgcg ccatttcggt
     2761 atcaagctgt tgtggttttg gcatttctgg cagccgtgcc acctgcgccc gcagcgcttc
     2821 gccgagcaga ttggacgatc ccagccattg cgactgttca cgcagcgtat tcaacgcctg
     2881 ccggacctgt aacgtctggc tggcagcctg acgctgttgc gaggcaacga gatccatccg
     2941 ctgcgcctgt tgattcaaag ccgccgatag ttcgcggtta attttgaatt gcgcgacgat
     3001 atctttcggc aaatcggcgc tgttttctgc cagcaattcg gtactttcca gcgcccgctc
     3061 cgcctcaagc tgacgttggc tgtttaattg attacgcaag gcctgcaaat acgcatccag
     3121 ttgctggctc tctttttccg ccagctctga gcgtaagcgc gctaattcct ggcggttatt
     3181 ggcagacagc tgcgccagct ccagttcatc aacgagcgcc ttaagacgtg cagagtcaga
     3241 ctgcaacgcg aaattttgtg cctgattgag cggagtattg ccggtaagcg ttcccaggcg
     3301 gcgctcgatc tcatttaact gacggcgggc gtcggtttgc tgttgcggca gttgattcag
     3361 cgaatcggca atctcgcggg tgcgctcctg ctcttgctgg gcctgacggc ttttatccag
     3421 caactggctg ctgacctgga gaatttcctg attcagcgcg tcggtagaca ttcccggcga
     3481 cacgctgcgc ggctcgtcac gcatgttgtt taattgtgcg cgcagagtag cggagagttt
     3541 cggataatta tcgataactt gctgatattg tttgatgcgc tcaagggaac cttttcgttc
     3601 ctcaagcgca tttaaggcag actggagcgc ctctacgact tccggctgtg cgggtttcgc
     3661 cgcttttgcc tgctccagtt cctgagtgat ttgtttgcta tcgggggccg tcgcggcgta
     3721 cgccccccaa ctgaggcacc aggccatcag aaaagtgata atcaggcgca cgtcagcgtt
     3781 tcctttgatg gattagacct ggtctttttt atcgtcaacc aatgggctgg cgtcgtgttc
     3841 tgcttcgatc tcttcagcag gaagtggggc gggttcagcg tctggcgtaa caaaggtttc
     3901 ggtagatact gccagcggct ggccaatttt cgtgacagac aggctttcca gttgctcaac
     3961 cagattcact ttacccggtg caaacaggtt gataacggtg gaaccgagtt taaagcgacc
     4021 catttcctgg cctttcagca gtgccacaga accgtcgttt tccccggcag gccaggtcca
     4081 gcgcttgatg ataccttcgc gcggcggcgt aatggtgccc gcccagaccg tctcaatgct
     4141 gccaacaatc gtcgctccga ccagaatctg cgccattggg ccaaattcgg tatcgaaaag
     4201 gcaaatcacg cgttcgttac gggcaaacag attcggcacg ttctgagcgg tgagatggtt
     4261 aacggagaag agatcgcccg gcacgtagat catctcacgc agaataccgt tgcacggcat
     4321 gtgtacgcga tggtagtcac gcggggagag gtaagtggtc acaaacgtac cgttgcggaa
     4381 caggtccgcc atcagatagt tgcctgccag cagggcttcg aggctgtagt tgtggccttt
     4441 ggcttgcagg attttatctt cttcgatttt acccaactgg ctgataacgc catcggcagg
     4501 catgaccagt acattcggat cggtatcgat tgggcgtact tcgtcacgca gcggacggac
     4561 aaagaattcg ttaaaggtgc ggtagctggc ggtgtccggc ttttgcgcct ctttcatgtc
     4621 gaccttgtag tatttaacga acagatcgat aaccagtttt gtcagccatc ctgcccgctt
     4681 gcttgcgccc caacccgcca ggcgagtaag ccatagtttc ggcagaatgt actgtagcga
     4741 aagtttaaat gaatttaaca aggtagcctc caggccattg ttttgtcgtt cctgatccgg
     4801 ccaacatgcc ggatcctgaa aaaaagggga cgattctaac gacggttagc ttaattgtca
     4861 gtcatccgta tcagaaaagt ttttacgcgt ttttacctgc gccatgcttt ccagaatacg
     4921 gtgatagttt tcgaaacggg tttccgcgat tttcccttcc tcaaccgctt cccggatagc
     4981 gcagcccgga tcggtatcgt gtttgcaatc gcgatattta cacagaccta aatagtcatg
     5041 gaattcgaca aagccctgag tgatttgttc cggctccagg tgccagaggc cgaactcacg
     5101 cacaccaggg gaatcaatca catcaccgcc gtgcgggaag tgatacagcc gagcggcggt
     5161 cgtggtgtgc tgaccgagcc ccgagttgtc agagacatcg ttggtcagga tctctttttg
     5221 cagccccagc aacgcattca gcaggctgga tttaccgacg ccagactgcc cggcaaaaat
     5281 gctgatgcgc ccggtcaacg cctcttccag cggttttagc ccatcctgag tatggctgga
     5341 aaccatcaat acgcgataac cgatattgcg gtagatatcc atctgctcgt tgacgaacgc
     5401 catgccttcg tcgtccagca ggtctatctt gttgagcaca ataatcggct caatctgcaa
     5461 ggtttcgcag gccaccaggt aacggtcgat aatattgagt gacagctccg gcaaaatggc
     5521 ggagacaatg acaatctggt cgatgttggc ggcaataggt tttacgccgt cgtagaaatc
     5581 cggacgcgtc aacaccgagg tacgctcatg caccgcttcc acgatccctt tgacatttac
     5641 gccttccgcc gccggtttac ccggacgcca gactacacgg tcgccggtca ccagcgaacg
     5701 gatggtacgg cgaatattgc agcggtgaac gtcgccatcg gcggattcca catcagcgtg
     5761 cataccaaag cggctgatga cgataccttc atcaggctcg ccaaacagat tgtcgtcgta
     5821 gtcgggcttc tccttagacg ttttaagacg acgctggtga ttggcgttca cgcggcgctg
     5881 ctggcctttg gagagtttat ttttactcaa tcgtacagac tcctggtcgc ccctgatggg
     5941 caaaacatct atgatacacg caattgtgga tcaatatagt cactgtgaat gggtggaaaa
     6001 tagcatgagt gccaatgaaa acaacctgat ttggatcgat cttgagatga ctggtctgga
     6061 tcccgagcgc gatcgcatta ttgagattgc cacgctggtg accgatgcca acctgaatat
     6121 tctggcagaa gggccgacca ttgcagtaca tcagtccgat gaacagctgg cgctgatgga
     6181 tgactggaac gtgcgcaccc ataccgccag cgggctggta gagcgcgtga aagcgagcac
     6241 gatgggcgat cgggaagctg aactggcaac gctcgaattc ttaaaacagt gggtgcctgc
     6301 gggaaaatcg ccgatttgcg gtaacagcat cggacaggac cgtcgtttcc tgtttaaata
     6361 catgccggag ctggaagcct acttccacta ccgttatctc gatgtcagca ccctgaaaga
     6421 gctggcgcgc cgctggaagc cggaaattct ggatagtttt accaagcagg ggacgcatca
     6481 ggcgatggat gatatccgtg aatcggtggc ggagctggct tactaccgcg agcattttat
     6541 caagctgtaa aatttttcct ggtcacgtaa gcgccggaat ccacttgcgg cggcgtgatt
     6601 ttgacgctaa attgaacgtc ttgctgataa tttcagcact tgagataaaa acgcaaaaaa
     6661 aacttttttg gggggttgca gagggaaaga tttctcgtat aatgcgcctc ccgtaacgac
     6721 gcagaaatgc gaaaattacg aaagcaaaat taagtagta
//
LOCUS       DADKRT010000206         6563 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.209, whole genome shotgun sequence.
ACCESSION   DADKRT010000206 DADKRT010000000
VERSION     DADKRT010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6563
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.209"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..357
                     /locus_tag="JQ356_003725"
     CDS             <1..357
                     /locus_tag="JQ356_003725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417590.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623675.1"
                     /translation="AITALNFYQGDVPSVMIRIQPENMSPLIIDISTGEHDNYIIQTL
                     DVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTQKEAILTAPTHFNKTCITSDC
                     WQILFFSPDHFNNDFY"
     gene            379..1584
                     /locus_tag="JQ356_003726"
     CDS             379..1584
                     /locus_tag="JQ356_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005008313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623676.1"
                     /translation="MFPVSSIGNDISSDLVRRKMNDLPEIPIENNLEALAPGIEKLKQ
                     TSIQMVTLLNALQPGGKCIITGDFQKELAYLQNVILYNDSFLRLDFLGYNAQIIQRSD
                     NTCELTINEPLKNQEISTGNINVNCPLKDIYNEIRRLNATFSCGTGDIVDLSSLDLRN
                     VDLDYYDFTDKHMANTILNPFKLDSTNFTNANMFQVNFVSSTQNATISWDYLLKITPV
                     LISISDMYSEEKIKFVESCLNELGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKE
                     IYKSSSKINNCLNRIKLPEMKEFSSKKTYDYIDIIIEDYENIKENAYLVVPQINYTMD
                     LNIEDSSSEELIPSRKTKILRTMALKSKNITHMKHITQRIYILPERNIRMITTFQMQY
                     RLNNFLQNL"
     gene            complement(1944..2320)
                     /gene="rnpB"
                     /locus_tag="JQ356_003727"
     ncRNA           complement(1944..2320)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="JQ356_003727"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(2353..3498)
                     /gene="garK"
                     /locus_tag="JQ356_003728"
     CDS             complement(2353..3498)
                     /gene="garK"
                     /locus_tag="JQ356_003728"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HAY4623677.1"
                     /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADG
                     GEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE
                     KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE
                     IGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAM
                     IVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTVL
                     NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH
                     QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG"
     gene            complement(3595..4485)
                     /gene="garR"
                     /locus_tag="JQ356_003729"
     CDS             complement(3595..4485)
                     /gene="garR"
                     /locus_tag="JQ356_003729"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HAY4623678.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAA
                     GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGT
                     ADHSALACYYEKLAKVEVTR"
     gene            complement(4515..5284)
                     /gene="garL"
                     /locus_tag="JQ356_003730"
                     /pseudo
     CDS             complement(4515..5284)
                     /gene="garL"
                     /locus_tag="JQ356_003730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312031.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
     gene            complement(5300..6536)
                     /locus_tag="JQ356_003731"
                     /pseudo
     CDS             complement(5300..6536)
                     /locus_tag="JQ356_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005155249.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT         1791 a         1706 c         1433 g         1633 t
ORIGIN      
        1 gcaattactg cattgaattt ctatcaaggc gatgttcctt ctgtcatgat ccgaatccaa
       61 ccggaaaata tgagtccatt aatcatagat atttctacag gagaacatga taattatatc
      121 atacaaacat tagatgtagg cacttttgca ccttttggtg aacaatgtac ttgctcagcc
      181 gtcaataaaa aagagctgga atgtattaag gagacgattt ctaagtattg cgcaaagttc
      241 acccaaaaag aagccatctt aacagcccct acgcacttta ataaaacctg cattacttca
      301 gattgttggc aaattctctt tttttcaccc gatcatttta ataatgattt ttattgatta
      361 tttataaagg ataaaataat gttccctgtt tcatcaattg gtaatgatat tagtagtgat
      421 ttagtccgtc gaaaaatgaa tgaccttcct gaaatcccca tagaaaataa tctcgaagca
      481 ctagcaccag gtatagaaaa actaaaacag acctctattc aaatggtcac tttacttaac
      541 gcgttacaac caggtggaaa atgtattatc actggtgatt ttcaaaaaga attagcgtac
      601 ttacaaaatg taattcttta taatgactcg tttcttcgtc tggatttttt aggttataac
      661 gcccaaatta ttcaacgatc ggacaatacc tgcgaactta ccattaatga accgttaaaa
      721 aaccaggaaa tatctacagg caatatcaat gttaattgtc cattaaaaga tatttacaat
      781 gaaatcagga ggttgaacgc aacctttagt tgtgggactg gagatatagt tgatctatcc
      841 tctctggact tacgtaatgt cgatttagat tattatgatt tcacagataa acatatggct
      901 aatactattc taaatccttt taaattggat tcaacaaatt ttactaatgc caacatgttt
      961 caggttaatt ttgttagttc aacacaaaac gccacaatct cctgggatta tttactaaaa
     1021 ataacgcctg ttttaataag tattagcgat atgtattctg aagaaaaaat caagtttgtc
     1081 gaaagttgtt taaatgagct tggagacatt accgaagaac aattaaaaat tatgagattt
     1141 gcaattataa aatctatacc aagggcaact cttacagata aattagaaaa tgaattaaca
     1201 aaagaaatat ataaaagctc atcgaaaatc aacaattgct tgaacagaat taaattacca
     1261 gagatgaaag aattctcatc aaaaaaaaca tatgattaca tcgatataat cattgaagat
     1321 tatgaaaata tcaaagaaaa tgcttatctg gtcgtccccc aaattaatta tactatggat
     1381 ttaaacatag aagactccag ctcagaagag ttaataccct cgagaaagac gaaaattctt
     1441 cggacaatgg ctttgaagtc gaagaatata acgcatatga agcatataac tcagagaatc
     1501 tatattttac cagagaggaa tatacgtatg attacgacct ttcaaatgca atatagactt
     1561 aataacttct tacaaaatct ataattaata ccgtagatat tcattcatct taccctgtgc
     1621 accaaaagca aaaactcact gacgcgggtt tgaaactgat ggcaaccgca aaaatgcctg
     1681 atgcgctacg cttatcaggc ctacgccatc tctgcaatat attgaatttg cgtgcttttg
     1741 taggcaggat aaggcgttca cgccgcatcc ggcatgaata aagcgcactc aacaatctga
     1801 aacccgccgg aacggtttat tacgtacatc aggtgaaact gaccgataag ccgctttctt
     1861 ttgggtatag tgtcgtggac agtcattcat ctttctgccc ctccaaaagc aaaaacccgc
     1921 cgaagcgggt ttttacgtaa atcaggtgaa actgaccgat aagccgggtt ctgtcgtgga
     1981 cagtcattca tctaggccag caatcgctca ctggctcaag cagcctaccc gggttcagta
     2041 cgggccgtac cttatgaacc cctatttggc cttgctccgg gtggagttta ccgtgccacg
     2101 gactgttacc agccgcgcgg tgcgctctta ccgcaccctt tcacccttac ctgatcccgc
     2161 ttgcgcgggc catcggcggt ttgctctctg ttgcactggt cgtgggtttc ccccccaggc
     2221 gttacctggc accctgccct atggagcccg gactttcctc ccctccgccc gtctcccccg
     2281 aagaggacga cgacgaagcg gcgactgtct ggtcagcttc ggcgcgcagt atagagggtt
     2341 tgcgcgccct tgtcaccccg cgttgcgcat tccaatcgcc agtgtcgcgg cgatattacg
     2401 tgaagcacgg cagatattgt cataagcccc gcggaatgct tcgtccaacg tacctatgct
     2461 ggtcaatacg ctgaagaccg catcaatgcc atgctgatgt acaacgccaa catcatcggt
     2521 caggctaccc gcaatgccaa tcaccggttt atggtacttc ttcgccacgt ttgcgacacc
     2581 aatcggtacc ttgccgtgaa tactctggct gtcaatacgc ccttcaccgg tgatcaccag
     2641 cgtacaatcg tgaatatgtt cttccagatt cagcaccgta gtgacgattt caataccact
     2701 tttcagttcc gcaccaagaa acgccatcag cgccgcgccc ataccgcccg cagctcctgc
     2761 gccggggaca tctttcacat caacatgcag cgctttttta atgacctcgg catagtgaga
     2821 gaggttattg tccagctcaa caatcatcgc ttcactggct cccttttgtg ggccaaagat
     2881 gcgcgatgcg ccgttatcgc ccaccagcgg attggtgaca tcacaagcga cgcgaatgac
     2941 gcaatctttt aagcgcggat cgaggccgga aatatcaata tcattcagag tattaagact
     3001 accgccgcca aaaccaattt cattgccgtt ggcgtcgcat aatttcgccc ccagcgcctg
     3061 taccatgcct gcgccgccat catttgtagc gctgccgcca atgccgataa taatgtttgt
     3121 cgcaccgctc tccagcgcct gcaggattaa ctcgcctgtg ccgcgtgaag tggtcacgag
     3181 tggatcgcgt ttttccgcag gtaccagctc cagcccactg gccgccgcca tttcaataaa
     3241 cgcggttttg ccatcgccgg agatccccca actggcattc actttctcgc ccaacggccc
     3301 tgtaacccag gcgtgacgtt cggaaccctg ggtggctgca atcatcgctt ccaccgttcc
     3361 ttcgccaccg tcggcaaccg gaacagaaac gtactgtgca tcaggaaaaa tttcccgaaa
     3421 tcctttttct atcgcctgcg caacctcgct ggcagataaa ctttctttat aagagtctgg
     3481 ggcgattacg attttcatac ctatgcctgt taccacatga cgccggaggg cgtttctctt
     3541 attcggcgtg gattccaggc ccggattgca atacgccatc cgggcacgac gtcattaacg
     3601 agtaacttcg actttcgcca gtttttcgta gtagcacgcc agagcgctat gatccgccgt
     3661 tcctaaacca tctgcacgca gtgcctgcat catctccata accgcagctg tgagcggcag
     3721 ttgcgcgccg acgccgtgag aagtatccag cgcattcgcc agatccttaa tatgcagatc
     3781 aatgcggaag cccggcttga agttgcggtc catcaccatc ggcgctttgg catccagcac
     3841 ggtactgccc gccagcccac cgcgaattgc ctgataaacc aggtccgggt taacgcccgc
     3901 tttagttgcc agcgttaacg cttctgacat cgcagcaata ttcagcgcca caatgacctg
     3961 atttgccagt ttggtgacgt tacctgcacc gatttccccg gtatgcacca cggaacccgc
     4021 catcgctttc atcaaatcat agtatttgtc gaaaatagcc ttgtcgccgc ccaccatcac
     4081 tgacagcgta ccgtcgatgg ctttcggttc accgccgctc accggagcat ccagcatatc
     4141 aatgcctttc gctttcagcg cttcgctgat ttcacggctt gccagcggtg cgatagaact
     4201 catatcgatc aataccgtac ctggcttcgc gccttcaata atgccattct cacccagcgc
     4261 cacctctttc acatgagggg agtttggcag catggttatg atgacgtcgc actgttcagc
     4321 gatcgcttta gccgtagacg ctgtttctgc acctgcagca atcacgtcag caatagcttc
     4381 tgggttacgg tcagcaacca ccagcgagta acctgctttc agaaggtttt tactcattgg
     4441 tttacccata atccccaggc caataaaacc aactttcata gtcatatcaa tcatctctct
     4501 tgttgcggtg gtggttattt tttaaaggta tcagccagtt tctgagtggc agagcggaag
     4561 acgccaagat cgctgccgac agccacaaac gtcgcgcccc attccagata acgacgcgca
     4621 tcggcttcga ccggcgcgag aataccgctg ggtttgccgt gcgcactggc acggttaaaa
     4681 atatgctgaa ttgctttttg tacatccgga tgcgaggcat tgccgagatg gcccaatgcc
     4741 gcagccagat cgctggggcc gacgaagata ccgtctacac cttcggtagc ggcaatagca
     4801 tcgacgttat ctacgccctg ctgactttct atctggacca gaatagtgat gttcttgttc
     4861 gactgagcga aataatccgc cacggtgcca aacatattgg cgcggtgaga aacggagacg
     4921 ccgcgaatgc cttccggcgg gtaacgagtt gatgccaccg cctgctctgc ttcctctttt
     4981 gtttctacaa aaggaatcag gaagttatag aaaccgatat ccagaagacg cttaataatt
     5041 accggctcgt tggtcggcac tcgcactact ggcgcgctgg cgctgccttt cagggccatt
     5101 aactgcggaa taaacgtgga aatatcgttt ggcgcatgtt cgccatccag caccagccag
     5161 tcaaacccag ccaaaccaag aacttcagtg ctaatcgggt tagagagtgc tgccagcaac
     5221 caatttgtac ctgtttcgca gccagtgcgg ctttgaattt attcgggaaa acatcgttat
     5281 tcatcgctta tacctttgct tatttctgca attccatacg tttaatgtcg ccaactacga
     5341 agaggtagca gaccatcgcc atcagcgctg aacatcccac gaaaaccagt gctgcattga
     5401 aggagtgcag ttcacttacc aggtagccaa tcaccagtgg agtgacaatg gaggcaacat
     5461 tgccaaagac gttaaagacg ccgccacaga ggccaacaat ctctttcggc gcggtgtcag
     5521 aaatcaccgg ccagcccaga gcaccaaatc ctttgccaaa aaaagccagc gccatcagca
     5581 tgaccaccag cgtggtgttg ttggtgtagt tacataagat gatggtggaa gccagcaaca
     5641 ttcccagcac aatcggtagc ttacgtgcca gggtcaggga taaaccgcgt ttgatcagat
     5701 aatccgagaa gacacctccc agcacgccgc ccgcaaaacc acacagtgcc ggaatcgagg
     5761 cgaccagacc cactttcaga atcgacatgc ctttttcctg caccagataa atcgggaacc
     5821 aggtgaggaa gaaccaggtg atggtgttga taaaatattg tccgaaaaat acgcccaaca
     5881 tcatgcggtt agagagcaat tgcttgatgt aatgcagttt gggaccgctt gctgccgcgc
     5941 tgcccggctt tttgtggtcc atatcgacca ccgcgccatt ttcagagata aacttcagct
     6001 cttccgcaga catacgtggg tgatctgtcg ggttataaat caacttgatc cacagcgccg
     6061 tcagcacaaa accaatcacc cccataacgg tgaagacgtg ctcccagccc caggcgaaag
     6121 tcagccagcc aagcagaggc gaaaagagcg ccagcgagaa atattgcgcc gagttaaaga
     6181 tggcggaggc agtaccacgt tctttcgtcg ggaaccaggc ggcgacaata cgggcgttcg
     6241 ccgggaatga tggcgcttcc gagaagccga gcataaagcg cataaagaac atagagatcc
     6301 ctgcccaggc cagcgggaac atatcaacaa agccttgcag gaaggtgaat agcgaccaga
     6361 aaaagaggct gtaggtgtaa acttttttcg agccaaactt atcaagcagc cagccgccgg
     6421 gaatttgcat cagcaggtag gacttcggta ccagcaatag acagcgttgc acaatcggcg
     6481 tagttaacgg cggtaacaat aaaaataatc agtaatatta aatagcgggt atgcacgcct
     6541 ttctttttta cgtcaacggt gtc
//
LOCUS       DADKRT010000207         6421 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.210, whole genome shotgun sequence.
ACCESSION   DADKRT010000207 DADKRT010000000
VERSION     DADKRT010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6421
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.210"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..454)
                     /locus_tag="JQ356_003732"
     CDS             complement(<1..454)
                     /locus_tag="JQ356_003732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4623679.1"
                     /translation="MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTD
                     NTALPKAVEMQYLPGQGLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPL
                     TVTWGGEEIKADAATTFTATKIFASDALTNGSLAKNLMFAQTTKGVLET"
     gene            complement(484..1200)
                     /locus_tag="JQ356_003733"
                     /pseudo
     CDS             complement(484..1200)
                     /locus_tag="JQ356_003733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225871.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
     gene            1509..2285
                     /gene="exuR"
                     /locus_tag="JQ356_003734"
     CDS             1509..2285
                     /gene="exuR"
                     /locus_tag="JQ356_003734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ExuR"
                     /protein_id="HAY4623680.1"
                     /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
                     SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
                     LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
                     AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
                     ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK"
     gene            2630..3292
                     /locus_tag="JQ356_003735"
     CDS             2630..3292
                     /locus_tag="JQ356_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY4623681.1"
                     /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
                     AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
                     GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
                     RG"
     gene            3296..3679
                     /gene="mzrA"
                     /locus_tag="JQ356_003736"
     CDS             3296..3679
                     /gene="mzrA"
                     /locus_tag="JQ356_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HAY4623682.1"
                     /translation="MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVH
                     QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI
                     IAQQDNNSQAMQWLTRLRDNSHRFG"
     gene            3826..4194
                     /locus_tag="JQ356_003737"
     CDS             3826..4194
                     /locus_tag="JQ356_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HAY4623683.1"
                     /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ
                     NRIDGLNKALSEVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAK
                     RERKLAEAQEELKKLEARDY"
     gene            4232..4537
                     /locus_tag="JQ356_003738"
     CDS             4232..4537
                     /locus_tag="JQ356_003738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY4623684.1"
                     /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
                     QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
     gene            4540..4944
                     /locus_tag="JQ356_003739"
     CDS             4540..4944
                     /locus_tag="JQ356_003739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623685.1"
                     /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
                     ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
                     TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
     gene            4934..5233
                     /locus_tag="JQ356_003740"
     CDS             4934..5233
                     /locus_tag="JQ356_003740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623686.1"
                     /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWN
                     MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
     gene            5329..5811
                     /locus_tag="JQ356_003741"
     CDS             5329..5811
                     /locus_tag="JQ356_003741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HAY4623687.1"
                     /translation="MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARI
                     LMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTA
                     LFTAGFTLLTAFLFHSKFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
                     "
     gene            5881..6421
                     /locus_tag="JQ356_003742"
                     /pseudo
     CDS             5881..6421
                     /locus_tag="JQ356_003742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312011.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
BASE COUNT         1674 a         1515 c         1536 g         1696 t
ORIGIN      
        1 ctgtctccag aacacctttg gtggtttgag caaacatcag gtttttagcc agagaaccgt
       61 tagttaacgc atcggaagca aagattttgg ttgcggtaaa agtggttgcc gcatcagctt
      121 taatttcttc accgccccag gttactgtca gcggaacaat cttgctagca tccaggcttt
      181 gaaccagttg cgccggggaa actaactgca tttttacatc tttggtaacg tcgttagacc
      241 agattttggt catcaactgg taagattgca gaccctgccc cggcagatat tgcatttcta
      301 ctgctttcgg caacgcggtg ttatcggtct gtgtcatatc cagagcggca tcaacgttgg
      361 ccgttacagt aatatccttt tgtactgcca atgcggagcc tgcaacagaa aacatcgctg
      421 cgaccagaag agattttgca aatacctttt tcattactat tccttcgttt attacaatga
      481 taattaatgg accgccagtt caaactcgcc attatctttg gtgatccagt tattatattt
      541 gacaacgatt ttgtcgtagc cagatatgct ttcaagattt ctttcctgac cagggaagat
      601 gtttttattt acggtctgta tcttacaatt ttctttgcta ttatttttac aataagcgat
      661 cgttaaaatc tttaagcgtt gattccctgc attaactaat ttttgggcag catttacttc
      721 taacttagca ataggttgct gaggtggaac actaacaaca atcccccaaa ttaagctaac
      781 agttaactgc atagagaaat cttttttatc tgtggcaacg tcatcaatac tgggaaccgc
      841 ttcaaattta acgcgttaat ttttttcttt ttgctctggt tccattgcaa caaagcgcac
      901 agttttgcta ctaccggctg gtaaagcgaa tttaggtggc ataacaacca gatgatttgc
      961 atcaccggat ttaatctcaa cttcattttc ctgaggcgtc gatggattat cgatacggaa
     1021 tactgtcgcc ttgatgtact gaacttcatt acttttagat attacgcgaa cgttgccttc
     1081 atcctgacta ttaatggaaa cagccatagg ataaacagtc atatttgact gtgccaaaaa
     1141 aggagcgaac acgaataaaa gcggcgcaag ccgtgataag agattaattt tcgccaccat
     1201 ataaatttga tcttacaata ttgtttccaa aaagttggtg tattagagat gtagatttat
     1261 tgtaagtcaa tataaaaaag catttttagt taatattaaa tttaaaggct gggaattaac
     1321 ttgctgaaat ttagtagctt tcacaatgac gatacttatt ttttaggaat ttataaatat
     1381 tcacaatatt aattcaatac attaattcaa tacattaatt caatcaccaa atttatatat
     1441 gaccaatggc atacccatga ataaagtggt atgataactt cgtccgcatt ccactccggg
     1501 agacgcatat ggaaatcact gaaccacgcc gtttgtatca acaacttgcc gctgacctga
     1561 aagagcgcat tgaacagggc gtctatctgg tgggtgataa actgcctgcc gaacgcttta
     1621 ttgccgatga aaagaacgtc agccgaacgg tagttcgtga agccatcatc atgctggaag
     1681 ttgaaggcta tgtggaggtg cgtaaaggtt caggtattca tgtggtttcc aaccagccgc
     1741 gccatcagca ggcggctgac aataatatgg aattcgccaa ttacggtccg tttgagttgc
     1801 ttcaggctcg ccagctcatc gaaagtaata ttgccgagtt cgcggcaact caggtaacga
     1861 aacaagacat catgaaactg atggccattc aggaacaggc gcgcggcgaa caatgcttcc
     1921 gtgattccga gtgggattta cagttccaca ttcaggtagc cctggcgacg cagaactccg
     1981 ccctggcggc catcgttgaa aaaatgtgga cccagcgtag ccataacccg tactggaaaa
     2041 aactacacga acacattgat tcccgtaccg ttgataactg gtgtgatgac cacgatcaaa
     2101 ttctcaaggc gttaattcgc aaagatcccc atgctgctaa gctggcaatg tggcagcatc
     2161 tggaaaacac caaaatcatg ttatttaacg aaaccagcga cgatttcgag ttcaatgccg
     2221 accgctatct attcgccgaa aacccggtag tgcatctcga tacggccacc agtggcagta
     2281 aatgaaactc ctgtccgaca ggcgctgcga cgcgcctgtt cgcttcgtcg gtaagcgaaa
     2341 agtataaagt gtcagcctgt gtaaatcctc tcgccaccct cccctgcatt cagcaaaatc
     2401 agactccacg gacatgtaat tttgataacg aacaacgttg acctttgtta caattagatt
     2461 caatttgaat ttatgttttt gaatgctttc ttatctcacg atttaacagg gaatagttca
     2521 ggctgtgttg atgtatcaaa cccgcagaac ataccaaaac agcaataaca ttgcggtagt
     2581 gcatctttta aaaccagcgt ggcgttaacc gattcaccag gaataatgaa tggaactttt
     2641 gacccaattg ctgcaagccc tgtgggcgca ggattttgaa accctggcca atccatcgat
     2701 gattggcatg ttgtattttg tcttgtttgt aattttgttc cttgaaaacg gcttgcttcc
     2761 agcggccttt ttaccgggcg acagtttact ggtattggtc ggcgtgttga ttgcgaaagg
     2821 cgcgatgggt tacccgcaaa cgattctgct gctgaccgtt gccgccagcc tcggctgctg
     2881 ggtcagctat attcaggggc gatggctggg caatacccgc accgtacaaa actggctatc
     2941 tcatttaccc gcgcattatc atcaacgcgc acaccatctt tttcataaac acggtttatc
     3001 ggcgctgtta attggtcgct ttattgcgtt tgtcagaaca ctgctgccga cgattgccgg
     3061 gttatcaggg ctgaataacg cgcgctttca gtttttcaac tggatgagcg gtctgctgtg
     3121 ggtattgatc ctgacaactc tgggttacat gctcggcaaa acgccggtat ttttaaagta
     3181 cgaggaccag ctgatgtcat gcctgatgct gctcccggtg gtgctgctgg tgtttggcct
     3241 ggcaggttct ctggtcgtgt tatggaaaaa gaaatatgga aatcgggggt aagggatgca
     3301 aatacctcgc atgtcgcttc gccagctagc ctggtccggc actgttttac ttctggtcgg
     3361 cacgctgttg ctggcctggt ccgcggttcg ccagcaagag tctacgctgg cgattcgtgc
     3421 cgttcatcaa ggcacaacga tgccagacgg tttttcgatc tggcatcacc ttgacgctca
     3481 tggcattcct ttcaaaagta tcacccccaa aaacgacact ctgttaatta catttgactc
     3541 cagcgaccag agcgccgccg caaaagcggt cctcgacaga acattgcccc atggctacat
     3601 cattgcgcag caggacaata acagtcaggc tatgcagtgg ctgacccggt tacgggataa
     3661 ctctcatcgc ttcggataac ttcctgttat ccgaaacata tcactcactt tggtgatttc
     3721 accgtaactg tctatgatta atgaggcggt ggttaacact accgcttcgt tgtctggaca
     3781 atcgttcctt tgtaacaggt ccgaatcaca atggaaggtt caagaatgaa ataccgcatc
     3841 gctttagctg tttctctctt tgctcttagt gccggtagtt atgccactac cctgtgtcag
     3901 gaaaaggagc aaaatatcct taaggagatc agctatgccg aaaaacacca aaaccagaat
     3961 cgtattgacg gtctgaataa agccctgagt gaagtccggg ccaactgttc agatagccag
     4021 ctgcgtgccg atcatcacaa gaaaatcgca aagcagaaag atgaggtggc ggaacgccag
     4081 caagatttag ccgaggcgaa gcaaaaaggc gatgccgata agattgccaa acgcgaacgg
     4141 aaactggcag aagcgcagga agagctgaaa aagctggaag cgcgcgacta ctaactcaca
     4201 atagtcacta cttactcacc tggagaaaac tatgtcgaaa gaacacacta cggaacatct
     4261 gcgtgctgag ttgaaatccc tttccgatac gctggaagag gtgcttagct catctggcga
     4321 gaagtcgaaa gaagagttga gtaagattcg tagcaaagcg gagcaggcac tgaaacagag
     4381 ccgttatcgc ctgggtgaaa ccggtgatgc catcgccaaa caaacccgtg tcgcggcggc
     4441 gcgtgctgat gagtatgtgc gtgaaaatcc gtggaccggc gtgggaattg gcgctgcaat
     4501 cggtgtagtg ctcggcgttc tgctgtcgcg tcgttaatta tggcggacac tcatcacgcg
     4561 caagggcccg gtaaaagcgt tctgggcatc gggcagcgaa ttgtttccat catggttgaa
     4621 atggtggaaa cacgtctgcg gctggcggtg gtggagctgg aagaggaaaa agctaatctc
     4681 tttcaacttt tactgatgct gggcctgacg atgcttttcg ctgcatttgg tcttatgagc
     4741 ctgatggtgc taattatttg ggcggttgat ccgcaatatc gcctgaatgc gatgattgcc
     4801 accaccgtgg tgttgctgct actggcactg attggcggta tctggacgtt acgtaaatcg
     4861 cgtaaatcca ccttgctgcg ccatacacgc catgagctgg caaacgatcg gcaactgctc
     4921 gaggaggagt cccgtgagca gtaaagtcga acgtgaacga cgtaaggcgc aactgcttag
     4981 ccagatccag caacaacggc tggatctttc cgccagtcgt cgtgaatggc tggaggcaac
     5041 aggcgcttac gatcgtcgct ggaatatgct gctaagtctg cgctcctggg cgctggttgg
     5101 cagtagcgtg atggcgatct ggacgattcg ccatcctaat atgctggtcc gctgggccag
     5161 acgcggtttt ggcgtatgga gcgcctggcg tctggttaaa acgaccctca agcagcaaca
     5221 gcttcgcggt taacttccct ctggccggag ccattccggc cctatcactc aaattttttg
     5281 aagatttttg acagttttcc ttgctaacaa tcatcattca ccacgtttat gattctctcc
     5341 atcgacagca acgacgctaa taccgcgccc ttgcacaaaa aaacaatcag cagcctgagt
     5401 ggcgcagtgg agagtatgat gaaaaaatta gaagatgttg gtgtactggt agcgcgcatt
     5461 ttaatgccga ttctgtttat taccgcaggc tggggaaaaa tcaccgctta ctctggtacc
     5521 caacaatata tggaagcaat gggtgtcccg ggttttatgc tgccgctggt gattctgctc
     5581 gagttcggtg gtggtctggc aatcctgttc ggtttcctga ctcgcaccac agccctgttt
     5641 actgcgggct ttacgctgct gacggcattt ttatttcaca gcaagtttgc tgaaggcgtc
     5701 aactcgctga tgttcatgaa aaacctgaca atttctggcg gattcctgct gctggcaatt
     5761 accggtccgg gcgcgtatag catcgaccgc ctgctgaata aaaagtggta agcacgcgct
     5821 atacttaacg ataaaaaacg aggaggaagc tcctcgtttt tgctattgga ggagagaaaa
     5881 atggggcaac tgattgacgg cgtctggcat gacacctggc cccactggca caggcggttt
     5941 tatcgcagag aaagatcgtt atcatctcta tgtttcactc gcctgcccgt gggcgcaccg
     6001 cacgctgatc atgcgcaaac tcaaaggact ggaaccgttt atttccgttt ccgtagtgaa
     6061 cccgctgatg ctggaaaacg gctggacctt tgatgacagt tttccgggag caaccggaga
     6121 tacgctctat caacatgaat ttctgtatca gctttatctc cacgccgatc cacactacag
     6181 cggacgagtt actgttcccg tgctgtggga caaaaagaac cacaccattg tcagcaacga
     6241 atcagcagaa atcatccgca tgttcaatac cgcgtttgat gcgctgggcg caaaagcggg
     6301 tgattactac ccaccagccc tgcaaacgaa aattgacgaa cttaacggct ggatttatga
     6361 caccgttaac aacggcgtgt ataaagctgg ttttgccacc agccagcaag cctacgacga
     6421 g
//
LOCUS       DADKRT010000208         6393 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.211, whole genome shotgun sequence.
ACCESSION   DADKRT010000208 DADKRT010000000
VERSION     DADKRT010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6393
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.211"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..208)
                     /locus_tag="JQ356_003743"
     CDS             complement(<1..208)
                     /locus_tag="JQ356_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311770.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HAY4623688.1"
                     /translation="MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAAL
                     KALRAENISTKVFNSGLGISVFRDN"
     gene            687..2465
                     /locus_tag="JQ356_003744"
     CDS             687..2465
                     /locus_tag="JQ356_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HAY4623689.1"
                     /translation="MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAG
                     TGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTP
                     VILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISK
                     IFATMIDNMDQGVLVVDDESRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTH
                     GHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGEC
                     RVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPE
                     QLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAR
                     EILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED
                     IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGE
                     VIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHNSK
                     KQVADELGIGIATLYRKIKKYELLNT"
     gene            complement(2505..2984)
                     /gene="xdhC"
                     /locus_tag="JQ356_003745"
     CDS             complement(2505..2984)
                     /gene="xdhC"
                     /locus_tag="JQ356_003745"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase iron sulfur-binding
                     subunit XdhC"
                     /protein_id="HAY4623690.1"
                     /translation="MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC
                     CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQ
                     CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK"
     gene            complement(2981..3859)
                     /gene="xdhB"
                     /locus_tag="JQ356_003746"
     CDS             complement(2981..3859)
                     /gene="xdhB"
                     /locus_tag="JQ356_003746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase FAD-binding subunit XdhB"
                     /protein_id="HAY4623691.1"
                     /translation="MFDFASYHRAATLADAINLLANNPQAKLLAGGTDVLIQLHHHND
                     RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAAMSIAG
                     LQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL
                     EHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG
                     VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMT
                     KKVISEAVAAAGGKLQ"
     gene            complement(3870..6167)
                     /gene="xdhA"
                     /locus_tag="JQ356_003747"
     CDS             complement(3870..6167)
                     /gene="xdhA"
                     /locus_tag="JQ356_003747"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdenum-binding
                     subunit XdhA"
                     /protein_id="HAY4623692.1"
                     /translation="MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVR
                     SPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALL
                     TRHVRHHGDAIAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGN
                     LLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
                     QIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKV
                     SLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGN
                     KVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEI
                     RLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVA
                     CFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVS
                     DVRVISTQDTDVTPFDPGTFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNL
                     TLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVD
                     LTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGV
                     VRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMA
                     TGVAINTLPLTPKRLYEEFHLAGLI"
BASE COUNT         1595 a         1511 c         1616 g         1671 t
ORIGIN      
        1 agttgtcgcg gaatacggaa atacctaatc cactattaaa gactttggtt gagatgtttt
       61 cagcacgcag tgcttttaat gctgcggcaa cgtccagtac ttgtttcagt tcatctggcg
      121 tctgttccca cgttaacaaa aaatctttct cgtgaaggtg agaggtcagc gaattgatat
      181 ccttaatcag ctcattaaca gttttcatca taaagtcccg gtagtggaat gacaggcaaa
      241 gtggtttatt tcactgtgac ttgccaaagt gattggtgtt ttcacagcta tacctgggac
      301 taacaataag tgtgccagaa ttatccgcgc ggctgcaaaa gactaatttg acggataatg
      361 tgtggggttg atcacaaatt gatgccagct tctggttgtt tgtaaaatac gaaaacgttt
      421 ggcttttttt atcgcgttat ttatttgctg ctaagtatca gaaataagat aaaggggcag
      481 gctatctctc ttcagtttga taaactcacc gccgtaattc tcatattgat atagaaatgt
      541 gatatctctt ccataatttc attagaaaat gataaaaatc ttatgttttt atcaaagcca
      601 atttcgcctg agttaatatc atcatgatct gtgaaccatc aacgtcttca atgatcgact
      661 tttaagtaag tctggaaggt aaagctatgg agcttgctac tacgcagtca gtattgatgc
      721 aaattcaacc gacaattcag cgttttgcca gaatgcttgc cagcgttttg cagcttgagg
      781 ttgagatcgt tgatgaaaac ttgtgtcgcg tcgccggaac gggcgcgtat gggaagtttc
      841 ttggtcgcca gttgagcggc aactcacgcc tgctccgcca cgtcctggaa acgaaaactg
      901 aaaaagttgt gacacagtct cgcttcgatc ccctttgcga aggttgcgat agtaaagaaa
      961 attgccgtga aaaagcattt ctgggtacgc ctgtcatttt acaggatcgt tgtgttgggg
     1021 tgataagttt gattgccgtt acccacgagc aacaagagca tatcagtgat aatttacgcg
     1081 aattttctga ttatgttcgc catatatcca ccatttttgt ttcgaaactt ctggaggatc
     1141 aggggccagg agataacatc agtaaaatat tcgcgaccat gatcgataat atggatcagg
     1201 gcgtattagt tgttgatgat gaaagtcggg ttcagtttgt taatcagact gccttaaaaa
     1261 cacttggtgt tgtacaaaat aatattattg ggaaacctat ccgtttcaga ccattaacat
     1321 ttgagagtaa ttttactcat ggacatatgc agcatattgt ttcgtgggac gataaaagtg
     1381 aattaatcat tggtcaattg cataacattc agggccgaca attattttta atggcatttc
     1441 accaatcgca taccagtttt tctgtagcaa atgcacctga tgaaccacat attgaacaat
     1501 tggttggcga gtgccgtgtt atgcggcaat taaaacgact cattagccgt attgcaccca
     1561 gcccatccag cgttatggtg gttggtgaaa gcggcacggg taaagaagtc gtcgcccgag
     1621 caatccataa gttgagcgga agacggaata aaccctttat tgctatcaac tgtgccgcga
     1681 ttccggagca gcttctggaa agcgaactgt tcggttatgt taaaggcgca tttactggcg
     1741 cttctgccaa cggtaaaaca gggttgattc aggcggcgaa tacgggcacg ctgtttctcg
     1801 atgaaatagg tgatatgcca ttaatgttgc aggctaaatt actgcgcgct attgaggcgc
     1861 gtgaaattct gccgattggt gccagtagcc caatacaagt cgacattcgc atcatttctg
     1921 caactaatca gaatttggcc cagttcattg ccgaaggtaa attccgcgaa gatctcttct
     1981 accgacttaa tgttatcccg ataactctgc caccgctgcg tgaacgtcag gaagatattg
     2041 aactattggt gcattacttt ttacatctgc atacccgtcg tctgggatcg gtttatcctg
     2101 gcattgctcc cgatgtcgtc gaaatattgc gtaagcatcg ttggcccgga aacctgcgcg
     2161 agttaagcaa tttgatggaa tatctggtta acgtagttcc ttcaggtgaa gttatcgaca
     2221 gcacgctatt gccgccaaat ctgctgaata atggcacaac ggagcaaagt gatgtaacag
     2281 aggtcagtga ggcgcacctg tcactcgatg atgcgggcgg cacggcgctg gaggagatgg
     2341 aaaagcaaat gatccgcgag gcgctttcac gtcataacag caagaagcaa gttgctgatg
     2401 aactgggcat cggcattgct acgctctatc gcaagattaa gaaatatgag ttgttaaaca
     2461 cataacctca gtgaatccgg cctgaattca ggccggatat ccttttactt cgttttctcg
     2521 caatccagaa ctgtatttac aatcatctga taccccgtgc agcgacaaag atttcccgcc
     2581 agtccgcgac gaatttccgt aatggttaat ggcttctcgc gtggtttcgc cagcattgcc
     2641 gtggtagcca taatcaggcc aggcgtacaa aacccgcact gcactgcgcc ggatttcgca
     2701 taagcctgct gaacatgaga aagttttccg cctttcgctt caccttccag cgtgcggatc
     2761 tcttttcctt cagcccaggc ggcaaggtat aagcaactgt ctattgctgt gccgtcgacc
     2821 aacaccgtac aggcaccaca ttcacccacg cagcaccctt gtttgacact tagcagtcct
     2881 tgttcgcgga gtaattccga gagcggcgtg cctggtgcgg cgtgaagctg aaaaggcatc
     2941 ccgttaatgg tgcattcgat ggtaattgtt tcgctgtgat tcattgcaat tttccccccg
     3001 ccgcggcgac ggcttcgcta atcacttttt tggtcatcgt ctggatgaga tgcagacgaa
     3061 actctttact ggcccgccat gaagaacgcg gggcgacatc ttgcaggaca gattcgctga
     3121 tagcttccag cgtttgcagg tttaatggcg cattttgtgc agtctgttcg gcatgttggc
     3181 agcgaatcgg cgttggcgcg gcaacaccaa atgccaggcg taattcgctg aaattgccgt
     3241 tatccagtcg gcaatgtgcg gcgcagccaa tcgttgaaat atccattgcg tcgcgcatgg
     3301 catatttaaa atgcgcgctg cccgcgtgtt ctttcggctg tggcggaaaa tgaaaggcga
     3361 cgaggatttc gtcatgctca agagacactt tgcccggccc ggtgtgaaag ccattaatcg
     3421 ggacgaaacg aacaccgcgc ggggagtgga tctccagttt cgcgtcataa attagcgttg
     3481 gcgtggcaga atctgcgctg gtggcaccgt tgcaaatatt tccaccgtag gtagcgacgt
     3541 tacggatctg cagtccagca atggacatgg ccgcagcaca taacgccggg agatgacgtt
     3601 gagttatagg atcttctatt agctgggtaa atgtcgttgc agagccgata cgtagcgagc
     3661 catcttccgc cagcgtaatt ccccgcagct ccgccagatt atgaatatca acaatatggc
     3721 gataacggtc attgtgatgg tggagctgaa tcagtacgtc agtgccaccg gcgagcagtt
     3781 tggcctgcgg gttgttagcc agcaggttga tggcatcggc aagggttgct gcgcgatggt
     3841 aagaagcaaa atcaaacatg atgttatcct caaatcaatc ctgccagatg gaactcttca
     3901 tataaccgtt ttggcgtcag cggcagtgta ttgattgcaa caccggtagc catcttcacc
     3961 gcgttacgaa tagcagcggc aacaggaatt attggtggct cacccagtga cttatgtccg
     4021 tatgcggatt gcggctcatt gatttcgacg aacgcgcttt ccagttgtgg cagatccggc
     4081 atggtcggca ttttgtaatc cagcagattg gggttacgga ccacgccgct tttagcatcg
     4141 atgatcatct cttcaaatag cgcccagcca atgcccattc ccattccgcc gtgtacctga
     4201 ccttctgcca gcagtggatt aagaatatgc cctgaatcat gaacgttgag gatgcggttg
     4261 atggtgactt tgcacagcgc aatatcgacc gtcagatcaa caaaggtaca gccaaacgcc
     4321 ggtgggttag tggtggtttt gatggagctt tcagcagaga gctgcccgcc gcgttcaggg
     4381 tggtagaaag cgtccatcgc caaatctttt aacgacatta acggctcttc cggtcgttca
     4441 accagcacga tatggccttt tatcagggtc agattcatcg ctgactgatg tagcatgact
     4501 gcggcgtgag cgatgatttt ctcttttaat aatagtgccg cactgcgcag cgcaggcgcg
     4561 gcaacatagc tctggcgtga ggcaaatgtg ccgggatcga acggcgtaac gtcggtatct
     4621 tgagttgaaa taacgcgaac gtcgctgacc ggaaccccca cggtttctgc caccatttgc
     4681 gagaagacgg tgtcggcacc ctgaccgatt tccgtcgcgc cgctttgcac gttgatggtt
     4741 ccatcctgat tcatcagaag gcgcgcgcct gctatttcta cgccgacagg ccaggtgtta
     4801 gaggtgtagc taaaacaggc gacgccaacg ccgcggcgca aattgccttg ctggttctgg
     4861 cattctgcac ggcgtttttc ccattcaaag attttccggc ctttttcaag acactccggc
     4921 aaccctgcgc tgtaaatacg tttgcccgtg agcggattag catctccttc gcgggcggcg
     4981 ttgcgtaaac gaatttcaac aggatcaata cctaacgctg tcgcggcgtc atcaagcata
     5041 gactcaacgg caaatacgac ttgtggcgcg ccataaccac gcatcgcacc agccgagggg
     5101 aggttggtat agcaggtctt tgaactgtaa gcgtaggcac aacgaggata aaggtaagcg
     5161 actttattcc cccccgcaga agcgatggag tgcccgtgag atgcataagc gccggtgtta
     5221 gacagaacat ccagactata acctttcaat gttccgtcgc ggttcacgcc catttgcccg
     5281 tcaatggtaa aagcgtggcg ggtacgggtt gcgaggaaac actcttcacg gctaagggaa
     5341 actttcaccg gaatgccgcc aagcttgctg gtcaggaatg ccgccattgg ctcttccagt
     5401 acatcctgtt tattaccaaa accgccaccg acaaatggtt tgatgactcg tacgcatgac
     5461 cagggaatat ccagcgcctg accaaccacg cggcgaacaa tgtgcgggat ctgggtgctg
     5521 gaaacgatgg taattcgcga gtcatcctcc atccacgcca gcgatgttac gctttccatg
     5581 tgacaatgtt gaataacggg ggtctgatag tgcccctgta cctggtagtc ggcggcatcg
     5641 attgtttgtt ggacattacc cgtcgacatc gtgctttgtt tcagtaaatt gccaccgtta
     5701 tggattggtg cagcgtcttc tgccagcgcc gcttctggcg tggtgataac gggtaattct
     5761 tgccactcaa tgctgaccaa ttgcgccgct ttttctgccg tgagttcatc gcgggccacg
     5821 acgatggcaa tggcgtcacc atgatgacga acatggcgag ttagcagtgc gcgatcggcg
     5881 gtatcgcgct tgttttcgtc aagtgtccag gcatgcccag ctgtagcgaa tggaatatca
     5941 ggcacatctt cccaggtaaa aatcgccagt acgcccggca aacttctggc ttgttcatca
     6001 ttaatactta cggcataacc atgtgcgata gggctacgta catatttcgc ataacacatg
     6061 cccgccataa cataatcgtc agtatatcgt gcccgcccgg tgaccttagc aatggcatcg
     6121 acgcgcatgc atgattcacc cgtagcggtt gcttcccgcg cttccataga aatcccctcg
     6181 atttgaacat ttggttctta tggcaaagat ttagtctaag caggcaagat ttacgccaga
     6241 aacgacgata agcgttaggg gaggtaggaa gtgtgatgac gttaaaaaaa cacagatatg
     6301 atacgaaaca ggagtctgaa taggggcagt gatacgtatc aatatgagtg gcgataaaat
     6361 caatgtgata aattgggatt attacgcatc agg
//
LOCUS       DADKRT010000209         6364 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.212, whole genome shotgun sequence.
ACCESSION   DADKRT010000209 DADKRT010000000
VERSION     DADKRT010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6364
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.212"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            11..361
                     /locus_tag="JQ356_003748"
     CDS             11..361
                     /locus_tag="JQ356_003748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HAY4623693.1"
                     /translation="MFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTH
                     FKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPW
                     QDLDEPHGRDVRFG"
     gene            654..1019
                     /locus_tag="JQ356_003749"
     CDS             654..1019
                     /locus_tag="JQ356_003749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY4623694.1"
                     /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
                     GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
                     CQAGTPSENRFGPDPKLEP"
     gene            1261..1617
                     /locus_tag="JQ356_003750"
     CDS             1261..1617
                     /locus_tag="JQ356_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY4623695.1"
                     /translation="MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLIL
                     GLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGVWALLYLVPIIGWLVLFVFACLEG
                     NSGSNRYGNDPKFGSN"
     gene            complement(1668..2564)
                     /locus_tag="JQ356_003751"
     CDS             complement(1668..2564)
                     /locus_tag="JQ356_003751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4623696.1"
                     /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
                     LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIV
                     TEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSS
                     EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD
                     KQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEERLRVVSPESTSEIDIIMAWR
                     RDSMGEAKSWCLREIPKLFSGK"
     gene            2669..3370
                     /locus_tag="JQ356_003752"
     CDS             2669..3370
                     /locus_tag="JQ356_003752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY4623697.1"
                     /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
                     QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS
                     EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
                     LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
                     VADSPLRALLIDLPV"
     gene            3393..3557
                     /locus_tag="JQ356_003753"
     CDS             3393..3557
                     /locus_tag="JQ356_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312016.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623698.1"
                     /translation="MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
                     TRLAEDEATA"
     gene            complement(3691..5001)
                     /locus_tag="JQ356_003754"
     CDS             complement(3691..5001)
                     /locus_tag="JQ356_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HAY4623699.1"
                     /translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL
                     EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ
                     AIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNS
                     VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG
                     LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ
                     GITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA
                     GMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
                     AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
     gene            complement(5029..6361)
                     /locus_tag="JQ356_003755"
                     /pseudo
     CDS             complement(5029..6361)
                     /locus_tag="JQ356_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026203.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
BASE COUNT         1611 a         1729 c         1497 g         1527 t
ORIGIN      
        1 ggtggcgaaa gtgtttgaat cgctggcgcg actggagcag attttaggcc agcatcgtta
       61 cctgaccggc aaccagctaa ccgaagccga tattcgcctg tggactacgc tggtgcgttt
      121 tgatccagtg tatgtgaccc acttcaagtg tgataagcac cgcatcagcg attacctgaa
      181 tctgtatggc ttcctgcgcg atatctacca gatgccgggg atcgccgaaa ctgtcaattt
      241 cgatcacatc cgtaatcatt acttccgcag ccataagacc atcaacccta cggggattat
      301 ttcaattggt ccgtggcagg atctcgatga accgcatgga cgagatgttc gcttcggtta
      361 aaaaaaggca ccttacgagg tgcctctgat aattagctaa gtgcatgttg ttcatgtcgg
      421 atgcggcgtg aacgccttat caaacctaca aaacgtttat attcaatatg ttaaaatgac
      481 cgcgtaggcc agataagcgt agcgcatctg gcgattttgc gcttgtcatc agtcttagcg
      541 caccttcacg gcactttatt aattccttga acgaatattt actgccattt cattcacgtc
      601 tattcttaat ttgctgcttt aaaaacaagt gattgagcaa aattgaggca aaaatggact
      661 ggtatctgaa agtactaaaa aattatgtcg gtttccgggg tcgtgcgcgg cgcaaagagt
      721 actggatgtt tattctggtc aacatcatct ttacgttcgt gctggggctg ctggataaaa
      781 tgttaggctg gcaacgcgcc ggtggcgaag gcatcctgac gacaatctac ggtattctgg
      841 tgtttttacc gtggtgggcg gttcagttcc gccgcctgca cgacaccgac cgctcggcgt
      901 ggtgggcact gttgttctta atcccgttta tcggctggct tattatcatc gtctttaact
      961 gccaggcggg tacgccaagc gaaaaccgct ttggaccaga tccgaaactg gaaccttaaa
     1021 acaaatctgc tcgccggatg tctgactcat ccggctttta tcatcatgtt gatgaatgaa
     1081 taatttacta atgtttattt aaaatatttc aatgtcgtta tataaattac ctataaaaaa
     1141 caaccatgta tttatcttaa atatcaaaac ctttataaca tccgaaaaag aaagatacga
     1201 atagcattta cacaataccc ggaatagact ttcgtcactt ttaattaaag ggatgttttt
     1261 atgcagtggt atttagccgt attaaaaaat tatgttggtt tctctggtcg cgcacgtcgt
     1321 aaagagtact ggatgtttac tctgattaac gccatcgtcg gcgctattat caatgtcatt
     1381 caattgattt taggtttaga gtttccattc ctttctctca tttacctggc agcaacaatc
     1441 attccggtca ttgctctgtg tgttcgtcgt ctgcacgata ctgaccgttc aggtgtgtgg
     1501 gcgcttctct atctggtacc gatcattggt tggttagttc tgtttgtatt tgcctgttta
     1561 gaaggcaatt ctggcagcaa tcgttacgga aacgatccta agtttggttc aaattaatct
     1621 tagaattggg gcgatatttc gccccttttt attaacaata ataaatatta ttttccgcta
     1681 aaaagtttgg gaatttcccg cagacaccag gatttcgctt cccccatact gtcacgacgc
     1741 caggccataa taatatcgat ctcgctggtc gattccgggc tgacgacacg caaccgctct
     1801 tccgcaatat ctttttcgac catcggatac ggcatcgtcg ccacgccaag ccccgccagt
     1861 aatgcctgac gtttatcttc aatcgtgctc accgttaagc gcggctgttt gtccagcagc
     1921 tgtacggtca acaccgggcg ctcacgagcg gtatccgcta ccgcaattcc acgatatttc
     1981 acgcgcgtca cttcagataa cggttccggc tcctgatgaa tcgggtgatc aggcgcggca
     2041 acgtagacgt tcattaaggt atagagcttg cgcgagttga tctccgacga ggaacgaaaa
     2101 tgcatatccg gcgcgataac gatatccgcc cgcccctgct ccagtcgttc ccacgccccc
     2161 gccagcactt cggtgatgat tgccagttgg gtattggctt ttgccgccag tttgtcgatt
     2221 aacgggaaaa aggcaggtgt cggtaccagc gcctcggtca caatggtgag atgcgtttcc
     2281 caaccgcgcg cgagggcttc cgcatcggta gtcagtttat ctgctgcttc cagcaaaacg
     2341 cgccctcgct ccagcaacat cctcccgaca ttggtgaatt tggtgcgatg gcccgagcgg
     2401 tcaaacagca ccacatccag ctcttcttcc agtttttgca tggtgtagct aagtgcggaa
     2461 ggcacgcgtc ccagctcatc cgccgccgcc gcaaaactgc cccggcgatc gatcgcatcc
     2521 ataacccgta gtgcttccag cgttaatgcc ctttctttgg ccatttcgtt ctcattcagg
     2581 aaatttgaac ataccgggca gaatatctgg ctaacaatgt agcgtccagc cccttaccat
     2641 aaaaggaagt aaagagaggt caagaattat gattactacc cgaactgcca ggcagtgtgg
     2701 acaagcagac tacggatggt tgcaggcccg gtatactttt tcctttggac actacttcga
     2761 cccgaaattg ttaggctatg cctccctgcg tgtgcttaac caggaagtgc tggccccagg
     2821 tgccgccttt cagccgcgaa cctatcccaa agtcgatatt ttaaatgtga ttctggatgg
     2881 agaagcagag tatcgcgaca gcgaaggcaa tcatgttcag gccagcgccg gtgaggcgtt
     2941 gctgctctct acccagccgg gtgtcagcta cagcgaacac aatctcagca aagacaaacc
     3001 gttaacacga atgcagcttt ggctggacgc ctgcccgcag cgagagaatc cgctgattca
     3061 aaaactggcg cttaatatgg gcaagcagca attaatcgcc tcgccagagg gtacgatggg
     3121 aagcctgcaa ttacgccagc aagtgtggct gcaccatatc gtgctcgaca aaggcgaaag
     3181 tgcgaatttc cagttgcatg ggccacgcgc gtatttgcaa tcgattcacg ggaaatttca
     3241 tgcgcttacg catcatgaag agaaagcggc gctgacctgc ggtgatgggg cgtttattcg
     3301 tgacgaggct aacattacgc tggttgccga ttccccactg cgcgctttgc tgatagattt
     3361 gcctgtctag ttgtttttac agggagatga tgatgagtaa aaaatcggcc aaaaagcgcc
     3421 agccagtgaa gcccgtggtg gcgaaagaac ctgctcgcac cgccaaaaat tttggctatg
     3481 aagagatgtt gagcgagctg gaagccatcg tcgcggatgc tgaaacgcgt ttagccgagg
     3541 atgaagctac cgcgtaaaga caggttgccg gatgcggcga aaacgcctta tccggcctac
     3601 aaaatccaac aacattaacg aattaaacaa cccgtaggcc ggataaggtg cgccagcatc
     3661 gcatccggca caatactcaa aacctggcgt ttatctggcc ttgctcgcca taatctcgat
     3721 aatctgccga tccgtttgct gcatcgaatg gcttgctaac gcacacaggt tggcaatcga
     3781 ctgctcaaca tcatgcgcca cgatcccttc attgccggtc acggcggtat catccagcgc
     3841 cattaacacc gctttccacg cagccgaagc actggtcgaa accttcatcg cgcagctgtt
     3901 cgacgcacca tcgcaaatca tgccgctgac atcgccgatc atactgctga tcgccatcga
     3961 gatagtttca taacgcccat ccaccagcca tgccatcccg gcggcggccc ccattgctgc
     4021 ggtcgttgcg gcacaaagtg cagacaaacg cggtaactgg ttatggatgt aaattgcgct
     4081 caaatgagaa agcatcagcg cacgcgccag tcgttcatca tccgctccga agtgttctgc
     4141 tacaaccacc acaggcattg ttgcggtgat cccctggtta cccgagccgg agttactcat
     4201 agccggaagc gtagcgccgc ccatacgcgc atcggatgcc gcgctggtac gaatcacaat
     4261 ggatgaagag agatctttcg ccagcaaacc gcgctcgcac tgtttttcca gcgtcgcgcc
     4321 aatatgcagc ccccacttac cgctcaaacc ttcctgcgat aacgcacaat ttagcttcgc
     4381 ggaatcgaga ataaagcgga tcgccgcaaa cgggacttca ttgacgaact tcaggatctc
     4441 agccagcgtc gttctggaaa gcaccgtcag cggagactct tgctcgccct ctgccacaca
     4501 cgcctgctgg gtaaacacca cactattgtg cgtctcaata tgcacaatgt tggtatgccc
     4561 gccgacgatg gtgacacacg cccacttctc accgttccag actttggcgc gtgagaagag
     4621 gatttcattg caaggttcct ggatcttaac ggagactttc cccgccgcca gcagtgcttt
     4681 ggcatcggca attgcctgcg cagttgcgtc tttcagcact tccagcccgg cgttggcatt
     4741 tccacctaac gcccccagcg ccgccgcaat cggcagcccc accattcccg tgccgggaac
     4801 ggtgacgccc agaccgttct tcatcagatt tggcgaaacc caggcttcta cacgttcaac
     4861 cggaccttcc agttctgccg cagcaaccgc cgccgccagc gccagtgaaa tcggttcagt
     4921 acatcccagc gccggtttta cttcctcctg aacggcgagg atgtaacgct gccataacgg
     4981 atttaaagtc gaatcaaaca tattaaaaac cttaaaattt caggtaaatc aagaaaatgc
     5041 caggaacgga gaaacacaaa gcaacaaacc agtgacgata atcaggtaca gagacatccc
     5101 tttgtatttg tgcaatgccg gtactttgta aaccagccac gccgggatca ggcaccctac
     5161 catgccgaaa atcgggctac agatagaggt gaagctcaac accggtgcgt tcagtacgat
     5221 ggcgctccag gccagcaaaa tggcgaaaat catgatgccg cgctgaacaa gattttcgtt
     5281 aatcttctcg gcaggcatct tgcgacgcag gatgttcatt acgatccctt gcgttgcttc
     5341 gcgaaagcct aaatagacgc caaagaatgc agtcatgaca gcaaagatat tgagaatgac
     5401 gctgaccact ttcacccacg ctgcgccgtc accgctaata aactgtgcgg caatcgccag
     5461 cgcggaaata ttctgctcgt aggcttttac cgcttcgtca tgtcccatcg ccagcgtgaa
     5521 cgacacggcg tagaaaaaga cggtgacaaa taaaatgcca aacgcgatat tcattgcccg
     5581 caatgcttta tgccgcgcca cttcaattga tttttcccgc gagcgataag agatcaccat
     5641 cgggcttaac gtctggataa acagaatcga cgtcagggta aacggcagcg taataatggc
     5701 gtttttcacc agcagcccca gcggcggtag cgaaccgacg ttatacagat gccacattcc
     5761 caccatcgac acgcccagcg cagcgactac cagcagcttg gtcagcacca tgccggtcga
     5821 aattttgaat aacaatttct cgccgcgtga agagatcgcc accagaatgc aaatcagtac
     5881 cagaccataa aagggactgt ctgacagcac cccttccgtc acgccgaagg tatgcagata
     5941 ggaagcacta tcgttggtga tggcggtgga atagacgaac atccaaatca ccagcattac
     6001 gaaatagagc gcacctaaca ggatgcccca gtttttacct aaataaccgc taatgacact
     6061 cgggtaatct ttacattctg tgtgattctg ccagcgtatt aataaacaac cgctgaaaca
     6121 gatacattgc cgggtaacca atcaccgatg agagcaaaaa tacccacaat cccatcaaac
     6181 cgacctgcac cgggagaaaa acaatccccg cgccaatcgc catcccgata ctcataatca
     6241 cccagccggt gtcagtactg tcgaatttga tcgcttctcg ccactcgctc tcactcattc
     6301 cagcacgacc cgccggggtc gaagcgtctg caatgacgcc tttattcgat gcaatttcca
     6361 taat
//
LOCUS       DADKRT010000210         6337 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.213, whole genome shotgun sequence.
ACCESSION   DADKRT010000210 DADKRT010000000
VERSION     DADKRT010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6337
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.213"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            30..152
                     /locus_tag="JQ356_003756"
     CDS             30..152
                     /locus_tag="JQ356_003756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001124879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HAY4623700.1"
                     /translation="MPKKMRTTRNLLLMATLLGSALFARAADKEMTIGAIYLDT"
     gene            168..1013
                     /locus_tag="JQ356_003757"
     CDS             168..1013
                     /locus_tag="JQ356_003757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001248814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HAY4623701.1"
                     /translation="MRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDA
                     IILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLSN
                     AAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDK
                     AISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELE
                     NNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATH
                     VDGLP"
     gene            1036..2547
                     /locus_tag="JQ356_003758"
     CDS             1036..2547
                     /locus_tag="JQ356_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY4623702.1"
                     /translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK
                     NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGGRAVYQELSLVEG
                     LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI
                     ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASC
                     ATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKP
                     KLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLETYEQGEIVINGEKITRPDYGDM
                     LKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMT
                     VKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVREL
                     AAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHSPVNVDELMSAILSVH"
     gene            2572..3570
                     /locus_tag="JQ356_003759"
     CDS             2572..3570
                     /locus_tag="JQ356_003759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY4623703.1"
                     /translation="MSASSLSLPLGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA
                     PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV
                     PLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPID
                     ENEVLDWLGGQFLGVPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGIN
                     VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG
                     SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR"
     gene            3603..4697
                     /locus_tag="JQ356_003760"
     CDS             3603..4697
                     /locus_tag="JQ356_003760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HAY4623704.1"
                     /translation="MKINRIVNEGFMKTMLAAYLPGNSTVDLREVAVPTPGINQVLIK
                     MKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDR
                     VLVYHISGCGFCPNCRRGFPISCTGKGKAAYGWQRDGGHAEYLLAEEKDLILLPDALS
                     YEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDM
                     LPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALRSTA
                     DWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAI
                     THRFSLEQAGDAYALMASGKCGKVVINFPD"
     gene            4709..5581
                     /locus_tag="JQ356_003761"
     CDS             4709..5581
                     /locus_tag="JQ356_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HAY4623705.1"
                     /translation="MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATD
                     ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLC
                     LVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ
                     AQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEG
                     YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG
                     ESTTSEMSLRVEWL"
     gene            complement(5629..6051)
                     /locus_tag="JQ356_003762"
     CDS             complement(5629..6051)
                     /locus_tag="JQ356_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HAY4623706.1"
                     /translation="MNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQ
                     YMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDM
                     TGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR"
     gene            complement(6148..>6337)
                     /locus_tag="JQ356_003763"
     CDS             complement(6148..>6337)
                     /locus_tag="JQ356_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenoxybenzoate dioxygenase"
                     /protein_id="HAY4623707.1"
                     /translation="WLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSG
                     KTFDAKLLIDENIALKSL"
BASE COUNT         1467 a         1515 c         1837 g         1518 t
ORIGIN      
        1 ttgttaataa aaaccctaca ggaggcacta tgcctaaaaa aatgagaaca acccgtaatc
       61 tattattaat ggctacgcta ttaggtagcg cactatttgc cagggctgcg gataaagaaa
      121 tgaccattgg tgcaatatac cttgatacct agggatatta cgctggagtg cgtcagggcg
      181 ttcaggatgc ggcaaaagat tcttcagtac aggtacagtt aattgaaact aacgcccagg
      241 gtgatatttc gaaagaaagt acctttgttg ataccctcgt ggcgcgtaat gtcgatgcca
      301 ttattttatc ggcagtgtct gaaaatggca gtagccgtac cgttcgtcgc gccagtgaag
      361 cgggtattcc ggtgatttgc tacaacacct gtattaatca aaagggtgtc gataaatatg
      421 tctcggcgta tctggtcggc gatccactgg aatttggtaa aaaactgagt aacgctgccg
      481 ccgattattt tattgccaat aaaattgacc agccgaaaat tgccgtcatc aattgcgaag
      541 cctttgaagt ttgtgtgcag cgacgtaaag gatttgaaga agtattaaaa tcccgcgttc
      601 ccggcgcgca aattgtcgct aatcaggaag ggactgtttt agataaagcg atttccgttg
      661 gtgaaaaact gattatctcc acgccggatc tcaacgccat tatgggggag tcgggcggtg
      721 cgacactcgg cgcggtaaaa gcggtacgta atcaaaatca ggccggaaaa attgctgttt
      781 tcggttcgga tatgacaacc gaaattgctc aggagctgga aaacaatcag gtgctgaaag
      841 cggtagtgga tatttccggt aagaaaatgg gcaatgctgt tttcgcgcaa acattgaagg
      901 ttatcaataa acaagccgac ggtgaaaaag tgattcaggt gccaatcgat ctctatacca
      961 aaacggaaga tggtaaacag tggctggcaa cgcacgttga tggtctgccc taatcgctga
     1021 ttcgcagagg tccctatgtt cacggcaaca gaggcagtcc cggtagcaaa agtggtggca
     1081 ggaaataagc gttaccccgg cgtcgttgcg ctggataacg ttaacttcac gctcaataaa
     1141 ggcgaagttc gtgcgctgtt aggtaaaaac ggcgcgggca aatcgactct cattcgaatg
     1201 cttaccggca gcgaacgccc ggatagcggt gatatctgga ttggcgagac gcgactggaa
     1261 ggtgacgaag ctacgttgac tcgccgtgcc gctgaactgg gggggcgtgc ggtttatcag
     1321 gaattaagtc tggtggaagg gctgacggtg gcagaaaacc tctgccttgg tcaatggcct
     1381 cgccgcaacg gcatgattga ttacctgcaa atggcgcagg atgcccaacg ttgcttacag
     1441 gcgctgggcg ttgacgttag tcctgaacaa cttgtttcaa cgctaagccc ggcgcaaaag
     1501 caactggtgg aaattgcacg ggtgatgaag ggcgagccgc gcgtggtcat tcttgatgaa
     1561 cccaccagct cgcttgccag tgcagaagtt gaactggtga tcagtgcggt gaaaaagatg
     1621 tcggcactgg gcgtggcggt gatttatgtc agccaccgga tggaagaaat ccgccgcatt
     1681 gcctcctgtg ccaccgttat gcgcgatggt caggtggcgg gcgatgtgat gctcgaaaac
     1741 acctccacgc atcatattgt gtcgctaatg ctagggcgtg atcacgttga tattgcgccg
     1801 gttgcccctc aggaaattgt ggatcaggcc gtactggaag tccgtgcgtt acgccataag
     1861 cccaagctgg aggatatcag ctttacgtta cgtcgcggcg aagtgcttgg cattgctggc
     1921 ctgctggggg cagggcgcag tgaattgctg aaggcgattg ttgggctgga gacgtatgaa
     1981 cagggcgaaa ttgttatcaa cggcgagaaa atcacgcgcc ccgattacgg cgacatgctg
     2041 aaacgcggca ttggctatac gccagaaaac cgcaaagaag cggggatcat tccctggttg
     2101 ggcgttgacg aaaatacagt gctgaccaat cggcaaaaaa tcagcgccaa cggagtgctg
     2161 caatggtcca ccatccgccg cctgaccgaa gaggtgatgc agcggatgac ggtcaaggcc
     2221 gccagtagcg aaacgcccat cggcacgctt tctggtggca atcagcaaaa agtggtgatc
     2281 ggtcgttggg tctatgccgc cagccagatt ttgttgctcg acgagccaac gcgcggcgtc
     2341 gatatcgaag ccaaacagca gatttaccgt attgtccgtg agctggctgc cgaaggaaaa
     2401 agcgtggtgt ttatctccag tgaagtggag gagttgccgc tggtgtgcga ccgcatcctg
     2461 ttgttacagc acggtacgtt ctcgcaggag tttcactcgc cggtcaatgt ggatgagctg
     2521 atgtccgcca ttctgtctgt gcactgatga attttaccga ggaacctgaa gatgtctgct
     2581 tcgtcattat cattgccgct gggcaagagc gtctcgctca aacaatttgt cagtcgccat
     2641 attaatgaga tcggtttgct ggtggtaatc gccattcttt atctggtctt ctccctgaat
     2701 gcgcctggct ttatctcatt gaataaccag atgaacgtgc ttcgcgatgc tgccaccatc
     2761 gggatcgccg cctgggcaat gacgctgatt attatctccg gtgaaattga tgtcagcgtt
     2821 ggaccgatgg tggcttttgt ctcggtgtgc ctggcatttt tgctgcaatt tgaagttccg
     2881 ttggcgattg cttgtctgct ggtgttgctg ttaggcgcgc tgatgggaac gctcgccggg
     2941 gtgctgcgcg gcgtgtttaa cgtgcccagt ttcgttgcca cactggggct gtggagcgcc
     3001 ctgcgcggaa tggggctgtt tatgaccaac gcactgccag tgccgattga cgaaaacgag
     3061 gtgctggact ggctgggcgg acaatttctc ggtgtgccag tatccgcgct gatcatgatg
     3121 gtgttgtttg cgctgtttgt gttcattagc cgaaaaaccg ccttcgggcg ctcggttttt
     3181 gccgttggcg gtaatgccac ggcggcgcag ttgtgcggta ttaacgttcg tcgagtgcgc
     3241 attcttatct ttaccctttc gggattatta gcggcggtga ccggcatttt gctggcggca
     3301 cgcctcggtt ccggtaacgc aggtgccgca aacggtctgg agtttgacgt catcgccgcg
     3361 gtcgtggtcg gcggtacggc actttccggc ggtcgcggtt ccctgttcgg tacattgctt
     3421 ggtgtgctgg tgattacgct aatcggtaac ggtctggtgc tgctcggtat taactccttt
     3481 ttccagcagg tggtacgcgg cgtcatcatc gtggtggcgg tgctggcgaa tatcttgctg
     3541 acccagcgaa gcagtaaagc gaaacgctaa accttaacgc ccctggcgcg ggtgcggcag
     3601 ggatgaaaat taatcgtatt gttaatgagg gatttatgaa aacgatgctg gcagcttatt
     3661 taccaggaaa ttcaaccgtc gatctgcggg aagttgcggt gccgacgccg gggattaacc
     3721 aggtactgat caaaatgaaa tcctccggga tttgcggaag cgatgtccac tatatctatc
     3781 atcaacaccg tgccacggcg gcggcacccg ataaaccgtt ataccaggga tttatcaacg
     3841 gtcatgaacc atgcgggcag attgtggcga tggggcaagg ctgtcgccat tttaaagagg
     3901 gtgatcgcgt gctggtgtat cacatttctg gctgtggttt ttgcccgaac tgccgccgcg
     3961 gctttcctat ctcttgtact ggcaaaggaa aagcggctta cggctggcag cgtgacggcg
     4021 gtcatgccga atacttgctg gcggaagaaa aagatctgat cctcctgccg gatgcgctta
     4081 gctacgaaga tggtgcgttt atcagttgcg gcgttggtac agcgtatgaa ggaattttgc
     4141 gcggcgaagt ttccggcagt gataacgtgc tggtggtcgg tctggggcca gtcggcatga
     4201 tggcgatgat gctggcgaaa ggtcgcggtg caaaacggat catcggcgtt gatatgctgc
     4261 cggaacgtct ggcgatggca aaacagttag gggtgatgga tcacggctat ttagcaacca
     4321 ccgaaggtct gccgcagatt atcgccgaac tcacccacgg tggcgcggat gttgcgctcg
     4381 attgttctgg taatgccgca ggtcgcttgc tggcactgcg atccaccgct gattggggac
     4441 gggtggttta catcggagaa accggaaaag tggagttcga ggtcagcgcc gatctgatgc
     4501 accatcaacg gcggattatc ggctcctggg tgaccagtct gttccatatg gaaaaatgcg
     4561 cccatgatct gacggactgg aaactgtggc cgcgtaacgc cattacccat cgcttctcgc
     4621 tggaacaggc tggagatgcc tatgcgctga tggcgagcgg caaatgcggg aaagttgtga
     4681 ttaacttccc ggattaagga gttagcggat gaccatctat accttatctc acggaccgct
     4741 aaagctggat gtctctgacc agggcggcgt aatcgaaggc ttctggcgtg acacgacgcc
     4801 gcttttacgt cctggtaaaa aaagcggtgt ggcaaccgat gcttcctgtt ttccgctggt
     4861 gccgtttgca aaccgggtga gcggcaatcg ttttgtctgg caggggcgtg agtatcaact
     4921 gcaaccgaat gttgagtggg atgcgcacta tctacacggc gatggctggc tgggcgagtg
     4981 gcaatgtgtc tcgcacagcg atgatagctt gtgtctggtg tatgaacatc gcagcggtgt
     5041 ctatcactat cgggtaagtc aggcgtttca tttaacggcg gatacgctga cggtgacgct
     5101 ctctgtcacc aatcaagggg cagagacgct gccatttggt accggctggc atccttattt
     5161 tccgttgtca ccacaaacgc ggattcaggc gcaggcgagc ggttactggc tggagcggga
     5221 gcagtggctg gcgggtgagt tttgcgagca gctaccgcag gaactggatt ttaaccagct
     5281 cgcgccgttg ccgcgccagt gggtgaacaa tggttttgcc ggatggaatg gtcaggcccg
     5341 catcgagcag ccgcaggaag gttatgccat catcatggaa acgacgccac ctgcaccgtg
     5401 ttatttcatc tttgtttccg accctgcgtt tgataaagga tatgcgtttg atttcttctg
     5461 tctggaaccg atgagccatg cgccggatga tcatcatcgc ccggaagggg gtgatctcat
     5521 tgcgctagca ccaggggaat caacaacttc agagatgtcg ttgcgggtag agtggctgta
     5581 atttattaaa tgccggataa ggcgttcacg ccgcatccgg catctttcct aacgccgatc
     5641 gagagaaatt gcccccggcc cggtaattgc caatagcaag aacgcgccag cgatactgac
     5701 attcttccag aaattaatca tatttggccc aaccgcatcg ccggtcatat cccagtaatg
     5761 gtgaccaatc accgccgtac ccagcgtgta gaaaataaac agcaccgcca gcggacgggt
     5821 gaaaaagcca agcacgatta atatcgcggc gggcacttcc ataactaccg caataatcgc
     5881 tgccagcatc ggcattggcg cgcccaacga ggccatatat tggaccgtac cgtcaaagcc
     5941 catcattttg ggaaaaccca aaataatgaa aattaagacc acggcgatac gggcaattaa
     6001 taacaaaacg gggcgggcag ctccaaaatc aaaataacgt agtgtgttca taaccaatcc
     6061 ctttgcaaga taatgtgatt taaacgtaat acacactctt gcacctcgcc acgccccagg
     6121 cgttgagata ttcgctaatt atcctggtta cagtgattta agcgcgatgt tctcatctat
     6181 cagcagtttc gcatcaaacg ttttgccgct ctggatccat ttgcgaattg ggcgaatctc
     6241 acgcccctga ttcagcgtga ccgcaccgat aagcacgccg ttttgcagat taaaccaaat
     6301 cgccttctga gtttccgggt tgccacgaca aagccag
//
LOCUS       DADKRT010000211         6317 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.214, whole genome shotgun sequence.
ACCESSION   DADKRT010000211 DADKRT010000000
VERSION     DADKRT010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6317
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.214"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            285..626
                     /gene="raiA"
                     /locus_tag="JQ356_003764"
     CDS             285..626
                     /gene="raiA"
                     /locus_tag="JQ356_003764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HAY4623708.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
                     DANFVEEVEEE"
     gene            730..777
                     /locus_tag="JQ356_003765"
     CDS             730..777
                     /locus_tag="JQ356_003765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623709.1"
                     /translation="MKHTPFFFAFFFTFP"
     gene            877..2037
                     /gene="pheA"
                     /locus_tag="JQ356_003766"
     CDS             877..2037
                     /gene="pheA"
                     /locus_tag="JQ356_003766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HAY4623710.1"
                     /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
                     PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
                     TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
                     FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQN
                     FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
                     GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
     gene            complement(2080..3201)
                     /gene="tyrA"
                     /locus_tag="JQ356_003767"
     CDS             complement(2080..3201)
                     /gene="tyrA"
                     /locus_tag="JQ356_003767"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HAY4623711.1"
                     /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
                     KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLKQG
                     DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
     gene            complement(3212..4282)
                     /gene="aroF"
                     /locus_tag="JQ356_003768"
     CDS             complement(3212..4282)
                     /gene="aroF"
                     /locus_tag="JQ356_003768"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HAY4623712.1"
                     /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKTI
                     SDIIAGRDPRLLVVCGPCSIHDLETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHQDLNGQLTARVA"
     gene            4490..4855
                     /locus_tag="JQ356_003769"
     CDS             4490..4855
                     /locus_tag="JQ356_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2799 domain-containing protein"
                     /protein_id="HAY4623713.1"
                     /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
                     SAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVESASQ
                     LHEVWQKGADENASTIRLN"
     gene            5005..5523
                     /locus_tag="JQ356_003770"
     CDS             5005..5523
                     /locus_tag="JQ356_003770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HAY4623714.1"
                     /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
                     WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
                     TFQMELTEQYPSKALLLIAKQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
                     DVLMLARKKNDG"
     gene            5513..>6317
                     /gene="dgcN"
                     /locus_tag="JQ356_003771"
     CDS             5513..>6317
                     /gene="dgcN"
                     /locus_tag="JQ356_003771"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HAY4623715.1"
                     /translation="MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLT
                     LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL
                     ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL
                     AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH
                     RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN"
BASE COUNT         1718 a         1612 c         1419 g         1568 t
ORIGIN      
        1 aaaaagagcc agtcagttgc ttaactgact ggcattacag cccttgagct gccgtttttt
       61 tattctgtta gttgtgaaac tgaagcgatt tagtcactat cgatctcatc aaatatggct
      121 cgctttgaga tattcctcaa gtaaaaaaac acctcttcct gcgatttctc acaaaaaaga
      181 ttcgttgaca aaaagtgaca aaattatgag attcccatca cacattttga catcaggaac
      241 ggtatgctga attcaccaag acgggaagac aagaggtaaa atttatgaca atgaacatta
      301 ccagcaaaca aatggaaatt actccggcca tccgccaaca tgtcgcagac cgtctcgcca
      361 aactggaaaa atggcaaaca catctgatta atccacatat cattctgtcc aaagagccac
      421 aagggtttgt tgctgacgcc acaatcaata cacctaacgg cgttctggtt gccagtggta
      481 aacatgaaga tatgtacact gcaattaacg aattgatcaa caagctggaa cggcagctca
      541 ataaactgca gcacaaaggc gaagcacgtc gtgccgcaac atcggtgaaa gacgccaact
      601 tcgtcgaaga agttgaagaa gagtagtcct ttatattgag tgtatcgcca acgcgccttc
      661 gggcgcgttt tttgttgaca gcgtgaaaac agtacgggta ctgtactaaa gtcacttaag
      721 gaaacaaaca tgaaacacac accgtttttc ttcgcattct tttttacctt cccctgaatg
      781 ggaggcgttt cgtcgtgtga aacagaatgc gaagacgaac aataaggcct cccaaaccgg
      841 ggggcctttt ttattgataa caaaaaaggc aacactatga catcggaaaa tccattactg
      901 gcgctgcgag agaaaatcag cgcgctggat gaaaaattat tagcattact ggcagagcgg
      961 cgcgaactgg ccgtcgaggt gggaaaagcc aaactgctct cgcatcgccc ggtacgagat
     1021 attgatcgtg aacgcgattt actggaaaga ttaattacgc tcggtaaagc gcaccatctg
     1081 gacgcccatt acattactcg cctgttccag ctcatcattg aagattccgt attaactcag
     1141 caggctttgc tccagcaaca tctcaataaa attaatccgc actcagcacg catcgctttt
     1201 ctcggcccca aaggttctta ttcccatctt gcggcgcgcc agtatgctgc ccgtcacttt
     1261 gagcaattca ttgaaagtgg ctgcgccaaa tttgccgata tttttaatca ggtggaaacc
     1321 ggccaggccg actatgccgt cgtaccgatt gaaaatacca gctccggtgc cataaacgac
     1381 gtttacgatc tgctgcaaca taccagcttg tcgattgttg gcgagatgac gttaactatc
     1441 gaccattgtt tgttggtctc cggcacgact gatttatcca ccattaatac ggtctacagc
     1501 catccgcagc cattccagca atgcagcaaa ttccttaatc gttatcctca ctggaagatt
     1561 gaatataccg aaagtacgtc tgcggcaatg gaaaaggttg cacaggcaaa atcaccgcat
     1621 gttgctgcgt tgggaagcga agctggcggc actttgtacg gtttgcaggt actggagcgt
     1681 attgaagcga atcagcaaca aaacttcacc cgatttgtgg tgttggcacg taaagccatt
     1741 aacgtgtctg accaggttcc ggcgaaaacg acgttgttaa tggcgaccgg gcaacaagcc
     1801 ggtgcgctgg ttgaagcgtt gctggtgctg cgcaaccaca atctgattat gacccgtctg
     1861 gaatcacgcc cgattcacgg taatccatgg gaagagatgt tttatctgga tattcaggcc
     1921 aatcttgaat cagcggaaat gcaaaaagca ttgaaagagt taggtgaaat tacccgttca
     1981 atgaaggtat tgggctgtta cccaagtgag aacgtagtgc ctgttgatcc aacctgatga
     2041 aaaggtgccg gatgatgtga atcatccggc actggattat tactggcggt tgtcattcgc
     2101 ctgacgcaat aacacgcggc tttcactctg aaaacgctgt gcgtaatcgc cgaaccagtg
     2161 ctccaccttg cggaaactgt caataaacgc ctgcttatcg ccctgcttca gcaactcaat
     2221 cgcctcgccg aaacgcttat agtaacgttt gattaacgcc agattacgct ctgacgacat
     2281 aataatgtcg gcataaagct gcggatcctg agcaaacagt cgcccgacca tcgccagctc
     2341 aaggcggtaa atcggcgaag agagcgccag aagttgctca agctgaacat tttcttctgc
     2401 cagatgcagc ccataagcaa aagtagcaaa gtggcgcaga gcctgaataa acgccatatt
     2461 ctgatcgtgc tcgacagcgc taatacgatg cagccgagcg ccccagacct gaatttgctc
     2521 cagaaaccat tggtatgctt ccggcttacg tccatcacac cagaccacaa cttgctttgc
     2581 caggctaccg ctgtccgggc cgaacatcgg gtgtaacccc agtaccgggc catcgtgcgc
     2641 cgccagcatg gcctgtaatg gtccattttt cactgatgcc agatcaacca gaatacaatc
     2701 tttcggtaaa ggcggtaatt tgccgataac ttgctcagta acgtggattg gcacactaac
     2761 aatcaccatt ccggcatcgg caacaatatc agccgctcga tcccagtcat gttgctccag
     2821 aatccgcacc tgataacccg agagtgtcag catcttctcg aacaggcgtc ccatctgacc
     2881 gccaccgccg acgataacca ccggacgcag tgacggacaa agtgttttaa atcctttgtc
     2941 gttttcactg gagtaagatt cacgcatcac ccgacgcaaa acatcctcaa tcagatctgg
     3001 cggtaccccc agagcttccg cctctgcacg acgcgaggcc aacatagatg cctcgcgctc
     3061 cggaacataa ataggcagtc caaagcggct tttcacctcg cccacttcag caaccagttc
     3121 cagacgcttc gctaataaat tcagcagcgc tttatcgact tcatcaattt gatcgcgtaa
     3181 tgcggtcaat tcagcaacca taataaacct cttaagccac gcgagccgtc agctgcccgt
     3241 tcagatcctg atgaatttca cgcagcaagg catcggtcat ttcccagcta atgcaggcat
     3301 cggttacgga tacaccgtat ttcatttcac tgcgcggttg ctcagaagac tgattgccct
     3361 cgtggatatt actttcgatc atcagaccaa taattgagcg attgccatct ttgatttgag
     3421 caaccacgga ttctgccacc gcaggctgac ggcgataatc tttattggaa ttaccgtggc
     3481 tgcaatctac catcagagac gggcgcagtc ccgcctgttc catctctttt tcacattgcg
     3541 caacatccgc agggctatag ttcggcgctt taccaccgcg caggatgaca tgcccgtccg
     3601 gattcccctg agtttgtagc aacgcaacct gccctgcctg gttaatgcca acaaaacggt
     3661 gcggctgggc ggcggcgcgc atagcgttaa ttgctgttgc cagactgccg tcggtgccgt
     3721 ttttaaaacc aaccggcatg gaaagcccgg aggccatttc acggtgagtt tgcgattccg
     3781 ttgtacgagc accaattgct gaccagctaa acagatcgcc caggtattgc gggctattcg
     3841 gatctaacgc ttccgtcgcc agtggcagtc ccatattcac cagctcaagc agcaatttac
     3901 gcgcgatctg cagcccggct tctacatcaa aagagccatc catatgggga tcgttaatta
     3961 accctttcca gccgacagtg gtacggggtt tttcaaaata gacgcgcatt accagataga
     4021 ggctatcgct gacctctgcg gcaagggctt taaatcgacg agcatattcc agagcagttt
     4081 ccagatcatg aatggaacaa ggaccacaaa ctaccagcag acgaggatcg cgcccggcga
     4141 taatatctga aatggtttta cgcgagtcag caatctgggc ttcttgttgc aggctcaatg
     4201 gaaaagcggc cttcagttgt tccggagtca ttaaaacctg ttcgtcggta atatgtacgt
     4261 tattcagcgc gtctttttgc atgatggcga tcctgtttat gctcgtttgc gatagttgat
     4321 cctcagcgag gatgacgtaa cgataacaca taaagtaaag ttttcaatcc atatttcgta
     4381 cgcttttctt tacacgaaca atttactcgc gctttgatgc ttatttcgta caaataaatt
     4441 tacaccccct ttaaaaacaa tccgctatgc tttgaaaaag gagaaagaaa tgatgaaaaa
     4501 gtttatcgcc cccttattgg ctttactggt tagcggatgt cagattgatc cttatactca
     4561 cgcgccaacc ttgaccagca ccgactggta tgatgtcggt atggaagatg cgatatcggg
     4621 cagcgccata aaagatgacg atgcatttgg cgattcacag gcggatcgcg gtctatacct
     4681 taaaggatat gccgaaggac aaaagaaaac ttgccagacc gattttactt atgcccgggg
     4741 actttccggt aaaagctttc ctgccagctg taacaatgtt gaaagtgcca gccaactgca
     4801 tgaagtatgg caaaaagggg ctgatgaaaa tgccagcaca atacgattaa attaattaaa
     4861 accccacaaa taaattaaac ataagatttt actcattgtg ttttatttct cacattgatg
     4921 acgatcgcat gaaaaaatga tattttaatg agcattctga aaaaatatcg atgcatttcg
     4981 agcgaagaag gtggggatcc ctgaatgcgt ttttctcacc gactgttctt acttctgatt
     5041 ctcctgctga cgggagcacc aatactcgct caggagcctt ctgacgttgc gaaaaacgtg
     5101 cgtatgatgg tttccggtat tgtcagttac acccgctggc ctgcgctatc agggccacca
     5161 aagttatgta tcttttcatc ttcacgtttt agtaccgccc tacaagagaa tgccgcgaca
     5221 tctttgcctt atctgcctgt catcattcac actcaacaag aggcgatgat ttcaggctgc
     5281 aatggttttt attttggcaa cgagtcaccg acattccaga tggaattaac cgaacaatat
     5341 ccgtcaaagg cgttattatt aattgccaaa caaaataccg agtgcattat tggtagcgcc
     5401 ttttgtctga tcatccacaa taatgacgtc agatttgccg taaacctgga tgccttatcg
     5461 cgtagcggtg taaaggtcaa cccggatgtc ttaatgctcg cacggaagaa aaatgatgga
     5521 taacgataat tctcttaata agcgccccac gtttaaaaga gcattacgca acatcagtat
     5581 gaccagcata tttatcacta tgatgctgat ctggttgctg ctttccgtga cctcggtgct
     5641 gaccctgaaa cagtacgcgc aaaaaaacct ggcactgaca gcagcaacaa tgacttacag
     5701 tctggaagca gctgtcgttt ttgccgatgg ccctgcagca actgaaacac tggcagcgct
     5761 gggccagcaa gggcaatttt caactgcaga agtacgtgat aagcagcaaa atattctggc
     5821 gtcctggcat tacacccgta aggatccagg cgatactttc agcaatttca taagccactg
     5881 gctcttcccc gcccccatca ttcagccgat tcgtcacaat ggtgaaacca ttggcgaagt
     5941 acgcttaacc gctcgcgaca gttcaatcag ccattttatc tggttttcgc tcgccgtact
     6001 gaccggttgt attctgctgg catcaggcat cgcaattacc ctcacccgcc atttgcacaa
     6061 tggcctagtg gaagcgctga aaaatatcac cgatgtcgta catgatgtgc gttccaaccg
     6121 caatttttcc cgacgagttt ctgaagaacg tatcgctgag tttcaccgct tcgctctcga
     6181 cttcaacagt ctgctggatg aaatggaaga gtggcagctt cgtttacagg ccaaaaatgc
     6241 gcagcttctg cgtaccgcgc tacatgaccc attaaccggg ctggctaacc gcgcagcgtt
     6301 tcgtagcggc atcaata
//
LOCUS       DADKRT010000212         6291 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.215, whole genome shotgun sequence.
ACCESSION   DADKRT010000212 DADKRT010000000
VERSION     DADKRT010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6291
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.215"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(83..619)
                     /gene="ssb1"
                     /locus_tag="JQ356_003772"
     CDS             complement(83..619)
                     /gene="ssb1"
                     /locus_tag="JQ356_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HAY4623716.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDK
                     ATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEV
                     VVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
                     PAAPSNEPPMDFDDDIPF"
     gene            873..3695
                     /gene="uvrA"
                     /locus_tag="JQ356_003773"
     CDS             873..3695
                     /gene="uvrA"
                     /locus_tag="JQ356_003773"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HAY4623717.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA
                     ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA
                     PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG
                     QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC
                     EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
                     FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
                     DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
                     ILVSGTPETVAECEASHTARFLKPML"
     gene            complement(3730..4086)
                     /locus_tag="JQ356_003774"
     CDS             complement(3730..4086)
                     /locus_tag="JQ356_003774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY4623718.1"
                     /translation="MTISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVEN
                     RPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQ
                     AVNLRPEEKRKLLVQL"
     gene            complement(4090..4506)
                     /locus_tag="JQ356_003775"
     CDS             complement(4090..4506)
                     /locus_tag="JQ356_003775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY4623719.1"
                     /translation="MWYQKTLTLSAKSRGFHLVTDEILNQLANMPRVNIGLLHLLLQH
                     TSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMQGTSLVL
                     PLHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE"
     gene            complement(4617..5330)
                     /locus_tag="JQ356_003776"
     CDS             complement(4617..5330)
                     /locus_tag="JQ356_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B acid phosphatase"
                     /protein_id="HAY4623720.1"
                     /translation="MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQA
                     PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT
                     NMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY
                     KPLPQAGAFGEEVIVNSEY"
     gene            5732..5954
                     /locus_tag="JQ356_003777"
                     /pseudo
     CDS             5732..5954
                     /locus_tag="JQ356_003777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165333.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1592 a         1554 c         1568 g         1577 t
ORIGIN      
        1 taacggaggc ttctttttta tggctggcag atgctttaat catccacctt aaaacaatat
       61 aacctattgt tttaatgaca aatcagaacg gaatgtcatc atcaaagtcc atcggcggct
      121 cgttagacgg cgctgccgga gcggactgct gcgggcgaga ctgcgcgccg ccgctgaact
      181 gattgccacc ctgcggctgc tgaggctgac cccaaccgcc ctgcggctga ccaccaccga
      241 tattaccacc tgccggagcg ccaccaccct gacgaccacc cagcatctgc atggtgccgc
      301 caacgttcac cacgacttct gtggtgtagc gatcctgacc ggattgatcg gtccatttac
      361 gggtacgcag ctgaccttcg atataaacct gagaaccttt acgcagatat tcgctggcca
      421 cttctgccag tttgccgaac agcacaacgc ggtgccattc agtctgttct ttcatctcgc
      481 cggtcgcttt atcacgccag gattcggaag tagccagcgt aatgttggca actgcgccac
      541 catttggcat gtagcgtact tccgggtcct gacccagatt accaacgaga ataaccttgt
      601 ttacgcctct gctggccatg ttcgtgtctc ctgaaaaaaa tcgttctgaa taagtgtaaa
      661 cgcgcgattg taccattacc aatagcgctt ttactatgtt gtgacctcgg ttccgggaaa
      721 caaacctggc cagacattgt tacacaacac tccggataat gcattccaat actgtatatt
      781 cattcaggtc aatttgtgtc ataattaacc gtctgtgatc gccggtagca ccatgccacc
      841 gggcaaaaaa gcgtttaatc cgggaaaggt gaatggataa gatcgaagtt cggggcgccc
      901 gcacccataa tctcaaaaac atcaacctcg ttatcccccg cgacaagctc attgtcgtga
      961 ccgggctttc gggttctggc aaatcctcgc tcgctttcga caccttatat gccgaagggc
     1021 agcgccgtta cgttgaatcc ctttccgcct acgcgcggca gtttctgtca ctgatggaaa
     1081 agccggacgt cgatcatatt gaggggcttt ctcctgccat ctcaattgag cagaaatcga
     1141 cgtctcataa cccgcgttct acggtgggga caatcaccga aatccacgac tatttgcgtt
     1201 tgttgttcgc ccgcgtcggc gaaccgcgct gtccggacca cgacgtcccg ctggcggcgc
     1261 aaaccgtcag ccagatggtg gataacgtgc tgtcgcagcc ggaaggcaag cgtctgatgc
     1321 tactcgcgcc aatcattaaa gaacgcaaag gcgaacacac caaaacgctg gagaacctgg
     1381 caagccaggg ttacatccgt gctcgtattg atggcgaagt ctgcgatctt tccgatccgc
     1441 cgaaactgga actgcaaaag aaacacacta ttgaagtggt ggttgatcgc ttcaaggtgc
     1501 gtgacgatct tacccaacgt cttgcggagt cgtttgaaac cgcgctggag ctttccggtg
     1561 gtacagcggt agtggcggat atggacgacc cgaaagcgga agagctgctg ttctccgcca
     1621 acttcgcctg cccaatttgc ggctacagta tgcgtgaact ggagccacga ctgttttcgt
     1681 ttaacaaccc ggcaggtgcc tgcccaacct gtgacggcct tggcgtacag caatatttcg
     1741 atcctgaccg cgtgatccaa aaccccgagc tgtcactggc tggcggtgcg atccgtggct
     1801 gggatcgccg caacttctat tacttccaga tgctgaaatc gctggcagat cactataagt
     1861 tcgacgtcga agcgccgtgg ggcagcctga gcgcgaacgt gcataaagtg gtgttgtacg
     1921 gttctggcaa agaaaacatt gaattcaaat acatgaacga tcgtggcgat acctccatcc
     1981 gtcgtcatcc gttcgaaggc gtgctgcaca atatggagcg ccgttataaa gagacagaat
     2041 ccagtgcggt acgtgaagaa ttagccaagt ttatcagcaa tcgcccatgc gccagctgcg
     2101 aagggacgcg tctgcgtcgg gaagcgcgcc acgtttatgt cgagaatacg ccgctgcctg
     2161 ctatctccga catgagcatc ggtcatgcga tggaattctt caacaatctc aaactagctg
     2221 gtcagcgggc gaagattgca gaaaaaatcc ttaaagagat cggcgatcgt ctgaaattcc
     2281 tcgttaacgt cggcctgaat tacctgacac tttcccgctc ggcagaaaca ctttccggcg
     2341 gtgaagccca gcgtatccgt ctggcgagcc agattggtgc gggcctggtt ggcgttatgt
     2401 atgtactgga cgagccgtct atcggcctgc accagcgcga taacgagcgc ctgttgggta
     2461 cgcttatcca tctgcgcgat ctcggtaata ccgtgattgt ggtggagcat gacgaagacg
     2521 caattcgcgc cgctgaccat gtgatcgata tcggtcctgg tgcgggtgtt cacggcggtg
     2581 aagtggtcgc agaaggtccg ctggaagcga tcatggcggt gcctgaatcg ttgaccgggc
     2641 agtacatgag cggtaaacgc aagattgaag tgccgaagaa acgcgttccg gcgaatccag
     2701 aaaaagtgct gaagctgaca ggtgcacgcg gcaacaacct gaaggacgtg acgctcacgc
     2761 tgccagtcgg tctgtttacc tgcatcacag gggtttcagg ttccggtaaa tcgacgctga
     2821 ttaacgacac actgttcccg attgcccaac gccagttgaa tggtgcgacc atcgccgaac
     2881 cggcaccgta tcgcgatatt caggggctgg agcatttcga taaagtgatc gatatcgacc
     2941 aaagcccaat tggtcgtact ccacgttcta acccggcgac ctataccggc gtgtttacac
     3001 ctgtgcgcga actgtttgcg ggcgtaccgg aatcccgtgc gcgtggttat acgccaggac
     3061 gtttcagctt taacgtccgt ggcgggcgct gcgaagcctg tcagggcgac ggtgtgatca
     3121 aagtggagat gcacttcctg ccggatatct acgtgccgtg cgatcagtgc aaaggtaaac
     3181 gctataaccg tgaaacgctg gaaattaagt acaaaggcaa aaccatccac gaagtgctgg
     3241 atatgaccat cgaagaggcg cgtgagttct ttgatgcggt gccagctctg gcgcgtaagc
     3301 tgcaaacgtt gatggacgtt ggtctgacgt acattcgcct ggggcagtcc gcaaccacac
     3361 tttctggtgg tgaagcccag cgcgtgaagc tggcgcgtga gctgtcaaaa cgcggcaccg
     3421 ggcagacgct gtatattctc gacgagccga ccaccggtct gcacttcgcc gatattcagc
     3481 aactcctcga cgtgctgcat aaactgcgcg atcagggcaa taccattgtg gtgattgagc
     3541 acaatctcga cgtgatcaaa accgctgact ggattgtcga cctgggacca gaaggcggca
     3601 gtggcggcgg cgaaatcctc gtctccggta cgccagaaac cgtcgcggag tgcgaagctt
     3661 cgcatacggc acgcttcctc aagccgatgc tgtaatcgtt aaggccgctt tctgagcggc
     3721 cttttccttt cagagttgta ccagcaattt acgcttttct tccggtcgta aattcactgc
     3781 ctgctgataa gacgcatcca ccagataata gatttgcgaa tccggcagcg aaccgtcgag
     3841 atacacggtg ctccagtgcg ctttattcag atggcggcta ggacgcacat cgctgtgctg
     3901 ctgacgtagc agctccgcca gctccgggct ggttttcagc gaaacagctg ggcgattttc
     3961 tacttctttc accatcgcaa acagtacatc ttccactttg atctgcgtcg ctttccagtc
     4021 gttatgcacg ctctgttctg cgcctagttt tgccatgcaa tattgtagca actccgaaat
     4081 ggtcattttt tactcccctt gtagtgtcgc gatgatgcga cgcgatccgc cgtggatgcg
     4141 atgttccccc agccagatgc cttgccaggt gccggtctga atacgccctt tatgtaacgg
     4201 caatacaagc gatgttccct gcattgagga tttgatatga gaaggcatat cgtctgctcc
     4261 ctcatagtca tgctcataat ttccgttgtc gggaacggtg cggaggaaaa aacgctccat
     4321 gtcgtggcgt acggtgggat cgcagttctc attaagtgtc agagaggcgg aggtatgttg
     4381 cagcaacaga tgcagtaagc cgatgttaac gcgcggcata ttagccagct gattcagaat
     4441 ttcatccgtt accagatgaa acccacgaga tttggcgcta agcgtgagcg tcttttgata
     4501 ccacatgtgc tgctccttga taaaactctc ttaatcagtt tgcagcaaga cagcgaaagg
     4561 ataaaggtgt gattaaaaaa acagcattcg ggagagcatc acgctctccc gctctgtcag
     4621 tattctgaat tgacgatcac ctcttcacca aacgcacccg cttgtggcaa gggtttgtag
     4681 gtagagttgg aggcgcgcag aatgcggata ccacgagcgc cgacatcgcg tgcggcggta
     4741 atatcattat cagaatcgcc ataaaaaatt cggatatttt tatcctgcag ccattgcgat
     4801 tttgtatttt gccctggttt atcgcccgca aagatcaccg gattcatgtt ggtggcagga
     4861 atatgaaaat tatccgccag cgtttttgaa accgtttctg ttttcgtcgg actacgacca
     4921 gtcacaaaga agatcgcgtc accgcggcgt acatgcatat caatcagctg gcgagcgacc
     4981 tcttttggaa tgctgaattc atcccagcca ttgttcattt tttcccagaa cacaggattt
     5041 ttcagataat cttcgctttc tggcgagaag gtttttttgc cgcgccagaa gcccgggctg
     5101 gaaaaaagta ccgtgtcatc gatatcaaac cccaccgcca ttggcggacg ccctgcgagg
     5161 ctattttcaa tttgtgcgac cgaaacccaa tgaattggtg cctgttcagc aagcctggca
     5221 acgttagtac cagggttaag cggtgaagga gatgaggcca gggcaacagc ggaactgttt
     5281 agagcgaaca ataagcaaac ggcactgatt gcctgtgtga tcttgcgcat atttttccct
     5341 aaatagtcag tatgttgaaa ctttttattg tgagatttgt tgcaaaaacc atctgaccat
     5401 aacgccagct gcaggggaaa ggaaggatta tctgcggttt ttgtgatgaa aagcaggatg
     5461 attatattta acccagtaaa tacgttcctg tctttttttg tataaaaaat gtttattact
     5521 cgatgtaagg atacattaat tttacgttta ttatgatgaa tcctctgcaa atgagcgaaa
     5581 tttgatagaa catttatctg ctgtacgatt taatgaactt aatgatacag cattacaaaa
     5641 acaatcgaag tttataaaga tgattcctga ttgaccagaa ccctatccta caatggtgat
     5701 taattttatt actcgcgatg gagatgatga tatgaatata tcatatatga atagcaacaa
     5761 aacgacatct ttacctgttg agctagatgc actaaataat aaagatatct cttatgccaa
     5821 agatttttct tatgtcaaag atttcttttt atacatagaa acacagttaa aaattgcaaa
     5881 agatttttgt agacttggag aagaagtatc aagttctatt gcaagtaaag tttttcacgc
     5941 atttattgat ttagttaaca aaatcagggg taagaaagac tttatgtata tttgcacgct
     6001 ttgctgtttt gccgaggagg ttaaaggtga ttattctcat tacaggacct ttttatttga
     6061 tattggtaat caatataagg ttaaacttac acaaagcgga aaaaaagagt tctctttaac
     6121 attagaattt aacgatacta taattgaatc tcagaaagtc acaggcaata aggcaaagca
     6181 tattcttgag gatatagaaa tattctatcg taacaaaccc gatacttatt attaaattta
     6241 ataatggtta gatgtgcaga aattattact ccacacgaaa aaatagggaa a
//
LOCUS       DADKRT010000213         6106 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.216, whole genome shotgun sequence.
ACCESSION   DADKRT010000213 DADKRT010000000
VERSION     DADKRT010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6106
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.216"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..236)
                     /gene="yneK"
                     /locus_tag="JQ356_003778"
     CDS             complement(<1..236)
                     /gene="yneK"
                     /locus_tag="JQ356_003778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY4623721.1"
                     /translation="MVTPISISNYIFLPDDFPVRNIAPQVKEVLKNFIDALSTIICDE
                     EWRTSLNTNSATKKIFNNLDNLSYIQRTSFRGNDT"
     gene            complement(314..1195)
                     /locus_tag="JQ356_003779"
     CDS             complement(314..1195)
                     /locus_tag="JQ356_003779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4623722.1"
                     /translation="MDLTQLEMFNAVAEAGSITQAAAIVLRVPSNLTIRLRQLETELG
                     VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAV
                     RIPATLAEFNHRYPKIQFSLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYR
                     EELMIVTPQGHAPVIRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESY
                     HGMLACVVAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLE
                     AFIQLLDVPDSAKQGYQ"
     gene            1296..2684
                     /gene="sad"
                     /locus_tag="JQ356_003780"
     CDS             1296..2684
                     /gene="sad"
                     /locus_tag="JQ356_003780"
                     /EC_number="1.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate-semialdehyde dehydrogenase"
                     /protein_id="HAY4623723.1"
                     /translation="MTITPATHAISINPATGEQLSVLPWAGANDIENALQLAAAGFRD
                     WRETNIDYRAEKLRGIGKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAE
                     HGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLK
                     HAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGA
                     AIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFII
                     EEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLL
                     LGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITVAKDAEHALELANDSEFG
                     LSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHE
                     FCNIQTVWKDRI"
     gene            2748..3674
                     /gene="glsB"
                     /locus_tag="JQ356_003781"
     CDS             2748..3674
                     /gene="glsB"
                     /locus_tag="JQ356_003781"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HAY4623724.1"
                     /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
                     ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA
                     IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
     gene            3674..4033
                     /locus_tag="JQ356_003782"
     CDS             3674..4033
                     /locus_tag="JQ356_003782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HAY4623725.1"
                     /translation="MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD
                     FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQR
                     YIVAVIYHWLVVQMNQP"
     gene            4172..5590
                     /locus_tag="JQ356_003783"
     CDS             4172..5590
                     /locus_tag="JQ356_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY4623726.1"
                     /translation="MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIVAELRLVHEL
                     SLFWPLNGVMAGVFARYVWLNRLHYYAISYVAMLVYDAITTEWGLVSLVINFSNMMFI
                     VTVALLVVRDKRLGKNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLA
                     DWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAF
                     PLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIA
                     TMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTV
                     MLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNP
                     VDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
                     LYRSKKDGRNRTSTMRYGEEVV"
     gene            5817..6056
                     /locus_tag="JQ356_003784"
                     /pseudo
     CDS             5817..6056
                     /locus_tag="JQ356_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="catalyzes the formation of D-tagaturonate from
                     D-altronate; incomplete; partial in the middle of a
                     contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagaturonate reductase"
BASE COUNT         1455 a         1405 c         1635 g         1611 t
ORIGIN      
        1 gtgtcgttac cccgaaaaga agtcctctga atatatgata agttatcaag gttgttaaat
       61 atcttttttg tggctgagtt ggtgtttaaa gacgtgcgcc actcttcatc acatattatg
      121 gtactgagtg catcaataaa attctttaaa acttctttta cctgaggtgc aatattacgt
      181 acgggaaaat catcaggaag aaatatgtaa ttactgatgc ttattggcgt aaccatattt
      241 gccccatata gtcataagtc atcggaacat cactatatag ggcatttgag ctgcaagaac
      301 tatcaaaaat agctcattgg taaccctgtt ttgccgagtc aggcacatcc agtagttgaa
      361 taaatgcctc aagcggacgc gttttcgcac cacgacgcca gaccagccag gttgttaacc
      421 aacgccattg ctcagctaac ggccacgctt caacctggtg atgccccggc atactttcca
      481 gcatagagcg tggaataagc gcaatgcctg ctcctgcgac cacacaggcc aacatcccgt
      541 gatacgactc catctcgtga atagttcccg gagcggcacc gtcagcatga aaccagctct
      601 cgaagtggcg acgatacgaa caattggcgc ggaaggcata aatgttactg ccgttaacct
      661 gactggcgcg gattactggc gcatgacctt gtggcgtgac gatcatcagc tcctcgcggt
      721 ataccggtat cccgtcaatg gcagtatggt taatgggccc atcaataaat gccgcattca
      781 gttttccctc cagcactcct tccagcatag tgccggaagg gccggtggaa agtgaaaact
      841 gaattttggg ataacgatgg ttgaattccg ccagcgtggc cggaatgcgc actgctgcgg
      901 tgctttccag cgaaccaaga gaaaataaac cttgcggctc atcgccagcg acaacgctcc
      961 gcgcttcatc cactaacgcg agaatttgtt ggctatagcg taaaaagtta tgcccggcag
     1021 gagagagacg taaacgctga ttctcgcgaa taaacagatc tacccccagt tctgtttcca
     1081 gctggcgtag acggatagtg agattcgacg gcacgcgaag cactattgct gctgcctggg
     1141 ttatgctgcc agcttcggca accgcgttga acatctccag ttgggtcaga tccataatat
     1201 tctcgattcg tgaataagtg gcttaatatt attcatttta aagcaagagt aaatctgcgt
     1261 atcttcatac catgactcat aaaggagata ccccgatgac cattactccg gcaactcatg
     1321 caatttcgat aaatcctgcc acgggtgaac aactttctgt gctgccgtgg gctggcgcta
     1381 acgatatcga aaacgcactt cagctggcgg cagcaggctt tcgcgactgg cgcgagacaa
     1441 atatagatta tcgtgctgaa aaactgcgtg gtatcggtaa ggctctgcgc gcccgtagcg
     1501 aagaaatggc gcaaatgatc acccgtgaaa tgggcaaacc aatcaatcag gcgcgcgctg
     1561 aagtggcgaa atcggcgaat ttgtgtgact ggtatgcaga acatggtccg gcaatgctga
     1621 aggcggaacc tacgctggtg gaaaatcagc aggcagttat tgagtatcga ccgttgggga
     1681 cgattctggc gattatgccg tggaactttc cgttatggca ggtgatgcgt ggcgcggttc
     1741 ccatcattct tgcaggtaac ggctacttac ttaaacatgc gccgaatgtg atgggctgtg
     1801 ctcagctcat tgcccaggtg tttaaagatg cgggaatccc gcaaggcgta tatggctggc
     1861 tgaatgccga caacgacggt gtcagtcaaa tgattaaaga ttcgcgcatt gctgctgtca
     1921 cggtgaccgg aagtgttcgt gcgggagcgg ctattggcgc acaggctgga gcggcactga
     1981 aaaaatgcgt actggaactg ggcggttcgg atccatttat tgtgcttaac gatgccgatc
     2041 tggaactggc ggttaaagcg gcggtagccg gacgttatca gaataccgga caggtttgtg
     2101 cagcggcaaa acgctttatt atcgaagagg gaattgcttc tgcatttacc gaacgttttg
     2161 tggcagctgc ggcagccttg aaaatgggcg atccccgtga tgaagagaac gctctcggac
     2221 caatggctcg ttttgattta cgtgatgagc tgcatcatca ggtggagaaa accctggcgc
     2281 agggtgcgcg tttgttactg ggcggggaaa agatggctgg ggcaggtaac tactatccgc
     2341 caacggttct ggcgaatgtt accccagaaa tgaccgcgtt tcgggaagaa atgtttggcc
     2401 ctgttgcggc aatcaccgtt gcgaaagatg cagaacatgc gctggaactg gctaatgata
     2461 gtgagttcgg cctttcagcg accattttta ccaccgacga aacacaggcc agacagatgg
     2521 cggcacgtct ggaatgcggt ggggtgttta tcaatggtta ttgtgccagc gacgcgcgag
     2581 tggcctttgg tggcgtgaaa aagagtggct ttggtcgtga gctttcccat ttcggcttac
     2641 acgaattctg taatatccag acggtgtgga aagaccggat ctgacgcgac atattcagct
     2701 ctgatatact cgcaggtctt ttcagacctg cggtccagga gtagaaagtg gcagtcgcca
     2761 tggataatgc aattttagaa aacatcttgc ggcaagtgcg gccgctcatt ggtcagggta
     2821 aagtcgcgga ttatattccg gcgctggcta cagtagacgg ttcccgattg ggcattgcta
     2881 tctgtaccgt tgacggacag ctttttcagg ccggagacgc gcaagaacgt ttttccattc
     2941 agtctatttc caaagtgctg agtctcgttg tcgccatgcg tcattactcc gaagaggaaa
     3001 tctggcaacg cgtcggcaaa gatccgtctg gatcaccgtt caattcttta gtgcaactgg
     3061 aaatggagca gggtattccg cgtaatccgt ttattaatgc tggtgcgctg gtggtctgcg
     3121 atatgttgca agggcgatta agcgcaccac ggcaacgtat gctggaagtc gtgcgcggct
     3181 taagcggtgt gtctgatatt tcatacgata cggtggtagc gcgttccgaa tttgaacatt
     3241 ccgcgcgaaa tgcggctatc gcctggctga tgaagtcgtt tggcaatttc catcatgacg
     3301 tgacaaccgt tctgcaaaac tactttcatt actgcgctct gaaaatgagc tgtgtagagc
     3361 tggcccggac gtttgtcttt ctggctaatc aggggaaagc tattcatatt gatgaacctg
     3421 tggtgacgcc aatgcaggcg cggcaaatta acgcgctgat ggcgaccagt ggtatgtacc
     3481 agaacgcggg ggagtttgcc tggcgggtgg ggctaccggc gaaatctggc gttggtggcg
     3541 gtattgtggc gattgttccg catgaaatgg ccatcgctgt ctggagtccg gaactggatg
     3601 atgcaggtaa ctcgcttgcg ggtatcgccg tccttgaaca attgacgaaa cagttagggc
     3661 gttcggttta ttaatgcagt ctctcgatcc actcttcgcg cgtttatccc gttcaaaatt
     3721 tcgctctcgc tttcgtctgg gcatgaaaga gcgtcagtat tgcctggaga aaggcgcgcc
     3781 agtcatcgaa caacatgcgg cggattttgt cgctaaacgt cttgctccgg cattaccggc
     3841 taatgacggt aagcaaacac ccatgcgcgg gcatccggtg tttatcgctc agcacgccac
     3901 cgcgacctgc tgtcgcggtt gtctggctaa gtggcataac attccgcagg gtgtttcgtt
     3961 aagcgaagaa caacaacgtt atatcgtggc ggtaatctat cactggctgg ttgtacagat
     4021 gaatcagcca tgagaattgc ggaaaacgat aaaatagcat tcccagggta cctttatttg
     4081 ccgccgctgt tagcgaacat gctatccttt atgagaattt acttattacg ttgagataat
     4141 tgccacccgc aattgtatgg acagataatt aatgcatgta caccccattt caactttccg
     4201 tttgttccag gaaggtcatc tgctacgtaa tagcatcgct atttttgcgc taaccacgct
     4261 gttctatttt attgttgcag agttacggct ggttcacgaa ctttctcttt tctggccgct
     4321 gaatggcgta atggcggggg tgtttgcccg ctatgtctgg cttaatcgac tgcattacta
     4381 tgcgatcagt tatgtggcga tgctggttta tgatgccata accaccgaat ggggactggt
     4441 ttcactggtt atcaatttct ccaatatgat gtttattgtt accgtcgcct tactggtcgt
     4501 gcgggataag cgtctgggga aaaataagta tgagccagta agtgccttac ggctatttaa
     4561 ttactgtctg attgccgcat tattatgcgc tattgtcggg gcgattggtt cggtcagtat
     4621 tgatagtctg gatttctggc ctttgcttgc ggactggttc agtgagcaat tctcaacggg
     4681 cgtgttgatc gtgccttgta tgctgacgtt ggctattcct ggagtgctgc cgcgctttaa
     4741 agcagaacag atgatgcccg ccatcgcgct tattgtgtcg gttattgcct cggtagtcat
     4801 tggcggagcg gggagtctgg cgttcccgct gcctgcatta atctggtgtg cagtgcgcta
     4861 tacgccgcag gtaacatgtc tgttgacctt tgtcaccggt gcggtggaaa tcgtactggt
     4921 ggcaaattcg gtgattgata tctcggtcgg ttcgccgttc tccattccgg aaatgttctc
     4981 cgcacgtctc ggtattgcca cgatggcgat atgcccaatt atggtttctt ttagcgtggc
     5041 agcgatcaat tcgctaatga agcaagttgc gctgcgagcc gactttgatt ttctgactca
     5101 ggtttactca cggtccggtc tttatgaggc gctgaaaagt ccatcgctga aacagacaca
     5161 acatctgacg gtcatgctgc ttgatatcga ctatttcaaa agcattaacg ataactatgg
     5221 acatgaatgt ggcgataaag tgttaagcgt gtttgcccgg catattcaga agattgtcgg
     5281 tgataagggg ctggtggcgc gcatgggcgg cgaagaattt gctgttgcag tgccgtcggt
     5341 gaatcctgtc gatggtctgc taatggcgga aaaaatccgt aaaggcgttg aactgcaacc
     5401 attcacctgg caacaaaaaa cgctttatct cacggtaagt attggcgtcg gtagtggtcg
     5461 cgcatcgtac cgaacgctga ccgatgattt taataaattg atggtcgaag ccgatacgtg
     5521 tctgtatcgc tcgaagaaag atgggcgcaa ccgtaccagc actatgcgtt acggtgagga
     5581 agttgtctga catctttatt cattccgcgc gatttgaatg caatgtgttc taccacttta
     5641 tgatccagga aaaggcgtat ttcctcgatt aaaccatgat ccgcgccaca cttttctcat
     5701 aaaactgctc attaatcatc aggagttgat caaaacaggg gttcggcgta ttaaattttg
     5761 ctaacctgtc gtaccaattc agacgggttg tatgactaat cagaagggaa cccattgtga
     5821 aaacactaaa tcgtcgcgat attcccggtg cacagtatcc agaacgtatc attcagtttg
     5881 gtgaaggtaa cttcctgcgc gcctttgttg actggcaaat cgatctcctg aatgagcaca
     5941 ccgatctgaa ttctggcgtg gtcgttgttc gtccgattga aacttcattc ccgccgtcac
     6001 tgagcacgca ggatggtctg tacaccacca ttatccgtgg cctgaatgag aaggggtgaa
     6061 gtggtcaaca aaaactggcc accgagttag agtttttcca gtatcg
//
LOCUS       DADKRT010000214         6098 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.217, whole genome shotgun sequence.
ACCESSION   DADKRT010000214 DADKRT010000000
VERSION     DADKRT010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6098)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6098)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6098
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.217"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(21..602)
                     /locus_tag="JQ356_003785"
     CDS             complement(21..602)
                     /locus_tag="JQ356_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000291745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623727.1"
                     /translation="MYYPVTDYIALALIISFLFLTLFICLLCLKHERIKKETIRQKNA
                     HILEHGWNATEFSWFRYGQYNETGIYISIEKTIIITITVSGGCFKKEYSIVSHMLVTD
                     TITEATLYENGLYTRHIRLSRPVSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLF
                     QGKMSTDGNNYYIIKGKVSSVLLLLKMLQINHA"
     gene            complement(649..4506)
                     /gene="sigA"
                     /locus_tag="JQ356_003786"
     CDS             complement(649..4506)
                     /gene="sigA"
                     /locus_tag="JQ356_003786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease autotransporter toxin SigA"
                     /protein_id="HAY4623728.1"
                     /translation="MNKIYSLKYSHITGGLVAVSELTRKVSVGTSRKKVILGIILSSI
                     YGSYGETAFAAMLDINNIWTRDYLDLAQNRGEFRPGATNVQLMMKDGKKFHFPELPVP
                     DFSAVSNKGATTSIGGAYSVTATHNGTQHHAITTQSWDQTAYKASNRVSSGDFSVHRL
                     NKFVVETTGVTESADFSLSPEDAMKRYGVNYNGKEQIIGFRAGAGTTSTILNGKQYLF
                     GQNYNPDLLSASLFNLDWKNKSYIYTNRTPFKNSPIFGDSGSGSYLYDKEQQKWVFHG
                     VTSTVGFISSTNIAWTNYSLFNNILVNNLKKNFTNTMQLDGKKQELSSIIKDKDLSVS
                     GGGELTLKQDTDLGIGGLIFDKNQTYKVYGKDKSYKGAGIDIDNNTTVEWNVKGVAGD
                     NLHKIGSGTLDVKIAQGNNLKIGNGTVILSAEKAFNKIYMAGGKGTVKINAKDALSES
                     GNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGTTVTNSNVKQSTLSLTNTDAYMYHGN
                     VSGNISINHIINTTQQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKEGN
                     NNCPIPFLCQKDYSAAIKDQESTVNKRYNTEYKSNNQIASFSQPDWESRKFNFRKLNL
                     ENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRNITGEGFGFRQQLRSGDSA
                     GESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIINKGATVTAQGKMYVDKAIE
                     LAGTLTLTGTPTENNKYSPAIYMSDGYNMTEDGATLKAQNYAWVNGNIKSDKKASILF
                     GVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAASASMYNTLWRVNGQSALQS
                     LKTRDSLLLFSNIENSGFHTVTVNTLDATNTTVIMRADLSQSVNQSDKLIVKNQLTGS
                     NNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFSNISPVISTKEDQEH
                     TTWTLTGYKVAENTASSSAAKSYMSGNYKAFLTEVNNLNKRMGDLRDTNGEVGAWARI
                     MSGAGSASGGYSDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASSNAFSGKTKSV
                     GAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGAEAGYRYHV
                     TEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKSFSGKDW
                     KVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLRFGLE
                     FEKSAFGKYNVDNAINANFRYSF"
     gene            complement(4867..5904)
                     /locus_tag="JQ356_003787"
     CDS             complement(4867..5904)
                     /locus_tag="JQ356_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001363149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HAY4623729.1"
                     /translation="MHRGFCVAHEPSILLPSVGAQLSNPDNITDNADRISDEWKAFDR
                     AIESNHGVPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSV
                     DGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATELETAGQKWS
                     LGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTNLDDNWTLGLV
                     AQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNR
                     QFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNT
                     YGAVAQFQFTF"
     gene            5856..6098
                     /locus_tag="JQ356_003788"
                     /pseudo
     CDS             5856..6098
                     /locus_tag="JQ356_003788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1519 a         1358 c         1365 g         1856 t
ORIGIN      
        1 ctaaaatacc gggacagaga tcaggcgtga ttaatctgca gcatttttaa taacagaagt
       61 actgagctta ctttaccttt gatgatgtaa tagttatttc cgtcggtact catttttccc
      121 tgaaataatg tcacggatgt ttcttcctgc tgatcctgca ggcgcagtcg taaggtcata
      181 tttttaatga gctgagatcc gggtggcaag gggtatttgc tgtcagatac tgggcgactg
      241 agtctgatgt ggcgcgtata cagcccgttt tcgtacaggg tggcctctgt tatggtgtca
      301 gtgaccagca tgtgggagac aatgctgtat tcttttttaa agcacccacc agaaacggtg
      361 attgtaatga taatggtctt ctcgatcgag atgtaaatac ccgtttcgtt atactgtccg
      421 tatcggaacc atgagaactc agttgcattc cagccatgct ccagaatatg tgcatttttt
      481 tgcctgatag tttctttttt tattcgctca tgtttaaggc ataacaggca gataaataat
      541 gtcagaaaaa gaaagctaat aatgagagca agagcgatat agtctgtcac agggtaatac
      601 atattctctc cggtagaaga agggccgcaa acgcggcccg ggctgttatc agaaagagta
      661 acggaagttg gcgttgatcg cgttatccac gttgtattta ccaaatgccg atttctcaaa
      721 ctcaagacca aagcgaagat tatcgcgaat ttcggcgttg agaccaacat tcatgagaat
      781 acgaccgtct ttttcacctt tgatacgttt ctcaccggac gcatcacgca gtacggtttc
      841 accgttggca aacaggtcaa actggtagcc aaggccggcg cgggctgtga ctttccagtc
      901 cttaccggag aaggatttac ccacatcaac accggtacgc ccaatcagcg gattaaagtc
      961 cttatccttc atggtcacgc tcattccgcg atcctgccag tcgaaccgtt tacctgatac
     1021 ggccccataa accagttctg cctgcggctc aatccaggag tcttctgtta catgatagcg
     1081 gtagcctgct tcagcaccca catacaagga atgagaactg tagtcttttg ttccgagccc
     1141 agcaaaggtc gccgagtact cattatcatg gtgaacatac ttactaatca ggtcgatata
     1201 ggcaccagag tcaaatatag cggaagcata cagacctgcc ccgacggact tcgtcttgcc
     1261 actgaatgca ttactgctgg catgactgtc ggtatacgtc atagtcagac cagtgaaaag
     1321 gtcaagtcca tccagctcat gttttttatc cacaccaatc tgcacatggg tgtagttgtc
     1381 actgtatcca ccagaagctg aacctgctcc gctcatgatg cgggcccatg caccgacctc
     1441 gccattggtg tcacgcagat cccccattcg tttattcagg ttgttgactt ctgtcaggaa
     1501 ggctttgtaa ttaccggaca tatacgattt tgctgcactg gaagatgctg tattttcagc
     1561 caccttatat ccggtcaggg tccacgtggt atgttcctga tcctctttcg tgctgatcac
     1621 aggagatatg ttgctgaaac ctatggcctg agtactggct ttaaatatct ctttattgct
     1681 tccttttggg gctgttatca ggtcaacgtt taatcctgag ttattatttc ccactttctg
     1741 tatatcgacc gacagactgt tattgcttcc ggttaactga tttttaacaa tgagtttatc
     1801 cgattgattt acagactggc tcagatcagc ccgcataatc acagtagtat tagtggcatc
     1861 cagtgtgttt actgtcacag tatggaaacc cgaattctct atgttactaa acaacaaaag
     1921 actgtcgcgg gtttttaatg attgcagggc tgactgtccg tttactctcc ataaggtgtt
     1981 atacatgctg gctgaggcag caggagcatc aatacctccg gtataagaag tatcaaagcc
     2041 acccagcaaa cctgtagcca gcggtgtgtg tgtggttttg tccaggttat cttctttata
     2101 ctggtcaaca ccaaacagaa tagatgcttt tttgtctgat tttatattac cattgaccca
     2161 ggcataattt tgagccttta acgtggcacc atcttctgtc atattatatc catctgacat
     2221 atagattgcc gggctgtatt tattattttc tgtaggggtg cctgttaatg tcagggttcc
     2281 ggccagttca atagctttat ctacatacat ttttccctgg gcggtaacag tagctccttt
     2341 gttgataatc aggtctgtat taattaagga taatgcacca gtcatagtaa cagttgattt
     2401 atcaccaaca gttattttgc tgttttgagc actcagactg ccgttgaaac tactttcgcc
     2461 tgctgaatcc ccggagcgaa gctgttgtct gaatccaaaa ccttcgccag taatgtttct
     2521 tcctgagaac atgtcaatgt atgcagtttt atttcccaga acaatttgag agtttttagc
     2581 ctctatgtgt ccttttacat tagcatcccg gcctatactc agggttgcgt tttctaaatt
     2641 taatttccgg aaattaaatt tacgactttc ccagtcgggc tgggaaaaag aggctatctg
     2701 attgttggac ttatattccg tattgtaacg tttatttaca gtgctttcct ggtcctttat
     2761 ggcagcagaa tagtcttttt gacataaaaa aggaattgga cagttgttat tgccttcttt
     2821 aaatatggca tgttctgtcg catgtccttg taatgttaac tgtgcattcc ggacagagat
     2881 atcgtttttg atatcgactg agccatcaaa gatcagattg gcattattgt tatgttgctg
     2941 ggtagtattg ataatatgat ttatgcttat attacctgat acattcccat ggtacatata
     3001 tgcatcagta ttagtaagtg ataatgttga ttgcttcacg tttgagttcg ttacggttgt
     3061 tcccgcatct gttgctgcga ttttctgaaa tgactggtca tagccgttta gatccagtgt
     3121 tccgccattt ctggtaaaat agatttcgcc attaccgctt tcgcttaaag cgtctttggc
     3181 atttattttt accgtacctt tacctccggc catgtaaatt ttattgaagg ctttttcagc
     3241 actaaggatg acagtcccat tacctatttt aaggttattt ccctgtgcta tttttacatc
     3301 cagagtacca ctacctattt tatgcagatt atctccggca acgcccttaa cattccattc
     3361 aacggtggta ttattatcaa tatctatccc ggcaccttta taagacttat cttttccgta
     3421 cactttatat gtctggttct tatcgaatat aagcccgcca atgccaagat cggtatcctg
     3481 cttgagcgtt aattcccctc ctcctgagac agacaggtcc ttatctttta taatcgatga
     3541 taactcttgt tttttaccat ccagctgcat agtgtttgtg aaattctttt ttaaattgtt
     3601 taccagaata ttattaaata acgagtagtt tgtccaggct atattggtac tactgataaa
     3661 accaactgta ctggtaacac catggaaaac ccatttttgt tgttctttat catatagata
     3721 agaaccagaa ccactatcgc caaaaattgg tgagttttta aaaggggttc tgttggtata
     3781 aatgtaactc ttgtttttcc agtccagatt aaaaagactt gcgcttaaca agtcgggatt
     3841 atagttttgt ccaaacagat attgtttgcc gtttaatatc gttgaggttg ttccggcacc
     3901 tgctctgaag ccaattattt gttccttacc gttgtagttt acgccatatc ttttcatcgc
     3961 atcttcggga gaaagtgaga agtcggcact ctccgtaacc cctgttgttt ccacgacgaa
     4021 tttattcaga cgatgaaccg aaaagtcgcc agatgatact ctgttacttg ctttatatgc
     4081 tgtctgatcc catgactgtg ttgttattgc atgatgctgt gtaccgttat gagtcgcagt
     4141 aacactgtac gcacctccaa ttgatgttgt tgcacctttg ttggaaacag cagaaaaatc
     4201 aggtacaggt agttctggaa aatgaaattt ctttccatct ttcatcatta attgaacatt
     4261 tgttgcaccc ggtctgaact ctcctctgtt ttgagcaagg tcaagataat cgcgggtcca
     4321 tatattattt atatccagca ttgctgcaaa tgctgtttca ccataacttc catatattga
     4381 ggataaaata ataccgagga taactttctt tcttgatgta ccgacactaa ctttccgggt
     4441 cagttcagaa acagcaacta atccacctgt aatatgacta tatttcagtg aataaatttt
     4501 attcatacgt gaactccgat atttctgagt tgtggttatg ggatagcatt taattacaac
     4561 ggggaactat cagtcatggt acgtaactga taagggtata atgataatca ctgtcagtta
     4621 tatttgtatg acagatgtaa caaaatgaaa aaaaagataa gcacaagtga ttgattggtc
     4681 agatattgat cacctggtgt ttgtattttg acctttgcga tcaaaatttg atctttgttg
     4741 tttccggtca atcctttaca ggttttctgt attatccggg ggagttaagt ctgtcgatgt
     4801 ccgacagact tttgatgatg gaaacaacat gcagcgataa tgtgcatgct gttttgcagg
     4861 tggaactcag aaggtgaact ggaactgtgc gaccgcaccg taagtgttgt ccgtgccgat
     4921 caggcctgca acatcaaggt gaaccacatc aaacggtgag atccccaccc cggccgtgaa
     4981 tgcactgccg tcgttaccgg ccagattctg acggtaaccg gcgcgcagct gtgcccattt
     5041 ccaggcatta aattctgcgc caatggcggc aaactgacgg ttgctgtcgg aggtgaaacc
     5101 gctggccggg gtcagatcca catcaaatgc ggtggtgaac atcgcgttgt gccaggagac
     5161 accggccgtc acctgcgggc ggatcctgaa ggtttccgtg ataccgttca cttcttttgt
     5221 ctcaatacta cgggggatca ggttctgtgc gaccagtccc agcgtccagt tgtcatccag
     5281 gttcgtactg gcaccgatgt cggcgttgat gccatttttc gtgttgtggt agcggtcgcc
     5341 tttgaaggcg ctgctgtcat aatttctgac cagcacgttg tagttgaaca ggtcgacgcg
     5401 ctggaatttg ggggggaagc ccagagacca tttctgcccg gccgtttcca gttccgtagc
     5461 cagagcaata cccacatcag tgatcagtgc cgcgcgggca aaggcctgtg atgtcaggcg
     5521 gcttttgtcc acctcctgcc cggtgctgtt tgccacctct tccaggtaag tgaggtcagc
     5581 atcagagact ttaccgtcga cactgacggt gccgtgtgat ttaaccatca gtgcggcaga
     5641 gaggcgatca ccgggaaggg ccgccacagc agaaacgccc agctgtgcgg cggcatgtgt
     5701 gttacggaag tcccggaggt gttctttcag gcgtgcggca gcctcaggaa caccgtggtt
     5761 actttcgatg gcgcggtcga aggccttcca ctcatcactg atccggtcgg cgttgtcggt
     5821 gatattatcc ggattggaga gctgcgcgcc gacggacgga agcaggatgc tgggctcatg
     5881 cgcgacgcaa aatccacgat gtatatatca gtactaaaag cgcgacggcg gaagaagctc
     5941 tgaaactaat cggtgaactg tacgccatag agcacgatat acgcgggtta ccggtgtctg
     6001 aacgcctggc ggtcaggcaa atgcagagta gaccgctcct gacttccctg tataagctga
     6061 tgcaggagaa agaacacacg ttatcgaaga aatgtcgt
//
LOCUS       DADKRT010000215         6055 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.219, whole genome shotgun sequence.
ACCESSION   DADKRT010000215 DADKRT010000000
VERSION     DADKRT010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6055
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.219"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(97..2199)
                     /locus_tag="JQ356_003789"
     CDS             complement(97..2199)
                     /locus_tag="JQ356_003789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY4623730.1"
                     /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP
                     AAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR
                     GIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ
                     QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPSDVDYTVSTTRFTTHGYRDHSGAQK
                     NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTI
                     KQTQAGLRYERSLSAQDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ
                     GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERN
                     LMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA
                     GSLKYAMTDAWNIYLAVGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR
                     IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA
                     SWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA
                     DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE
                     PSPGRNYGVGMNIAWRFE"
     gene            2441..3502
                     /locus_tag="JQ356_003790"
     CDS             2441..3502
                     /locus_tag="JQ356_003790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HAY4623731.1"
                     /translation="MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAY
                     EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT
                     LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
                     GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKI
                     LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA
                     VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ
                     KSTKQQEATQPDDVIRIAL"
     gene            complement(3615..5114)
                     /gene="ansP"
                     /locus_tag="JQ356_003791"
     CDS             complement(3615..5114)
                     /gene="ansP"
                     /locus_tag="JQ356_003791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HAY4623732.1"
                     /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA
                     MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS"
     gene            5381..5998
                     /locus_tag="JQ356_003792"
     CDS             5381..5998
                     /locus_tag="JQ356_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY4623733.1"
                     /translation="MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGTSRELL
                     KTLNPLCQIPTLTLENDEIMTETAAIALMVLDRRPDLAPPVGRAERQQFQRLLVWLVA
                     NVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDC
                     YLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII"
BASE COUNT         1612 a         1535 c         1444 g         1464 t
ORIGIN      
        1 ttgtcttgct gaaattatgc aacaaaatat tgctatttta taccagcaat acaatcgtta
       61 aagtaaatgc ccggcaaata ccgggcatca aggtaattac tcaaatctcc acgcaatatt
      121 catgccgaca ccataatttc gtccgggcga aggttcgtaa tatcgcccgt ttgactcatt
      181 gacaatgaca gaaccaacgt attctttatc gaataaatta tcgacacgac caaataaatc
      241 cacagttaaa ttgtggtaat tgtatttata cccggtgaat aagccgacga gagtataaga
      301 cggcgctttt gccgtatttt catcatctgc cataatatcg cccatataac gcgcttctgt
      361 gcctgcatac caaccatctt ccggtacata acctatcgac gcaaagccca tattacgggc
      421 gatccctggc atccgattac cgttacaatc ctgttcattg caaacattgc tgcgataggt
      481 cgcatcaagc caggtccagg acgcgtttac gcgaaaatct cctgcgaaac gttgatccca
      541 tgccagttca gcgccttgac gacgggtctt tccggcattt ttgtaagtcg tacgcccacc
      601 gctactgcta tcgacaacaa tttcatcatc agtgtcggtc tgaaacaatg cgagactaag
      661 cagcccatca ccaatacgcg ttttactgcc gatctcaatt gtatcgttgg tggatggttt
      721 taaaccaaag ttcataccgc tttgcccatc agcacgataa gacagctcat taatcgtcgg
      781 cgtttcaaaa cctcgcccga ctgccagata gatattccag gcatcggtca ttgcatattt
      841 taacgaaccg gcaggtagcc atttatgata actggcatca ccgctgtcat cgccgttacc
      901 cggagtaacg taatggtcgt tggaatcaaa ccacacggag ctgtagcgca cgccagcatc
      961 cagcgacagt ttttcgctca gctgccactg cgtctgtaaa tagggatcga tgttccacat
     1021 cagattgcgt tcgtcgcgac gcaactcacc tttttgcccg tactccggca tgccgctatt
     1081 caggcggaag ttattgtagc ccttgcggtt ttcactcatg ttttcgtagt tcaggccggt
     1141 agtgaacgtg accggaacgc ccagttcacc acggtgtgtc cagcggctgt ctatcccctg
     1201 gtaatggcgt tgcagggtaa tcacgccgcc cgcatgtgac gggttaagtt gtggtgccat
     1261 gggtattgac tggtactggg tcgtttctcg ctctccggca tacatcatca cactcatatc
     1321 atcttgcgcg ctcaggctac gctcatagcg caaccctgcc tgagtttgct tgatggtttt
     1381 tcgcgtgtcg tactgttctg cacgaggcgc ttgttgtgga ttagccttcc attctgcttt
     1441 ggttagccca cctgggtcat ctgctttgat atccacacta ttgaaaatca gacttaattt
     1501 gctggcttca tcaatgcgta cgcccagttt ggcattggct aaatttttct gtgcgccact
     1561 atggtcacga tagccgtggg tcgtaaaacg cgtggttgag acggtgtaat cgacatcgct
     1621 aggctgtgtg ccgtctcccg ttgcgcccgt tgctttcagc ccatagcgcc agctgccaaa
     1681 actgccgtag taactactgg cttcaatggt tggtggctgt tgtccggtct gggtggtgac
     1741 attcattacc ccaccagacg cgttgccata cagggcagag aaggggccac gcagcacttc
     1801 cacattttgc acactgctta aatcgatgtt ggatgtttgc ccttgcccgt cgggcatggt
     1861 ggcgggaata ccgtccacat acaggcgaat accgcgaata ccgtaagtgg agcgggagcc
     1921 aaatccgcga atcgacagct gtaaatcttg cgcatagttc tgccggtttt gtacctgcaa
     1981 accaggcacg ccggtcagtg attcggacaa gttaatgcgc ggtgttgcca ggcgcatctc
     2041 ctcgccatcc accacgctta ctgctgctgg ggtatccagt tctgaaacca cctgcggtgc
     2101 ggcactgaca atcatagtct gttcatcagc ggcaaaaaca acgggggaaa ggacaagcag
     2161 tgcgggcaaa acggtctgtc ggacggaaaa aatcttcatg aaaaaagcca ggttaagaat
     2221 gggaaaacgc tgtcatggta ataaaattgt aaacttatgc aaaacgaaac ggcacgatac
     2281 gttaattaat tgagaaaatt gtagtcgtaa cggcaagaaa tgctccacat ttgagaaaat
     2341 aatgattacc attcccattt ataacaagag cgtgacgatg attacgctta gcgaagcatt
     2401 gtgaagcagc aaaaatattg gttcatcaaa gggagtcgtc atgcatttac gtcatctgtt
     2461 ttcatcgcgc ctgcgtggtt cattactgtt aggttcattg cttgttgctt catcattcag
     2521 tacgcaggcc gcagaagaaa tgctgcgtaa agcggtaggt aaaggtgcct acgaaatggc
     2581 ttatagccag caagaaaacg cgctgtggct cgccacttcg caaagccgca aactggataa
     2641 aggtggcgtg gtttatcgtc ttgatccggt cactctggaa gtgacgcagg cgatccataa
     2701 cgatctcaag ccgtttggtg ccaccatcaa taacacgact cagacgttgt ggtttggtaa
     2761 caccgtaaac agcgcggtca cggcgataga tgccaaaacg ggcgaagtga aaggccgtct
     2821 ggtgctggat gatcgtaagc gcacggaaga ggtgcgcccg ctgcaaccgc gtgagctggt
     2881 agctgatgat gccacgaaca ccgtttacat cagtggtatt ggtaaagaga gcgtgatttg
     2941 ggtcgttgat ggcgagaata tcaaactgaa aaccgccatc cagaacaccg gtaaaatgag
     3001 taccggtctg gcgcttgata gcaaaggcaa acgtctttac accactaacg ctgacggcga
     3061 attgattacc atcgacaccg ccgacaataa aatcctcagc cgtaaaaagc tgctggatga
     3121 cggcaaagag cacttcttta tcaacatcag ccttgatacc gccaggcagc gtgcatttat
     3181 caccgattct aaagcggcag aagtgttagt ggtcgatacc cgtaatggca atattctggc
     3241 gaaggttgcg gcaccggaat cactggctgt gctgtttaac cccgcgcgta atgaagccta
     3301 cgtaacgcat cgtcaggcag gtaaagtcag tgtgattgac gcgaaaagct ataaagtggt
     3361 gaaaacgttc gatacgccga ctcatccaaa cagcctggcg ctgtctgccg atggcaaaac
     3421 gctgtatgtc agtgtgaaac aaaaatccac taaacagcag gaagctaccc agccagacga
     3481 tgtgattcgt attgcgctgt aatagatatg gcgagggtga aaacggtgag acttgcctgc
     3541 cttttatcac ggcgtatccg gcactttcgt cagtaatctg aatttgcccg gcacgtagcc
     3601 gggcaatttt gcaattaact cgccgtttca ggcttaaaca caatttcctg tttttcttca
     3661 tcttcctcga cgactggcgc agtgctgtga atttcagcaa cgcgtttgcg cacaccaaac
     3721 cagcctataa ccagcagaat accgataatc ggcagcgccg cgatagtata agtcccgttc
     3781 gggtaatcga acgccatcag cacaaggaca ctcagtaaaa acagtaatgt cagccaggaa
     3841 gtgaagggcg cgccaggcag tttaaaactg acatccgctg ctttgccttc tttaatcgct
     3901 ttacgcaggc gcatctggca cacgatgata aacgcccatg aagcgatgat tcccagcgac
     3961 gcgaagttca acacaatctc aaatacgcgc gacggcacca gatagttgag gaatacgccg
     4021 acgacataca caaccagtgt cgctagaatc ccggcatacg gcacatgctg acgactcatt
     4081 ttcgccataa aactcggtgc ggaaccgccc atcgccattg agcgcagaat acgtccggtg
     4141 cagtacagac ctgagttcag gctggagagg gcagcggtca gcaccacaat gttcataatg
     4201 ctgccgatat atggcacacc cagtttagag aaaaacgtca cgaacggact ttgccccgcc
     4261 tgatacgcgc tccacggcaa taacataacc agcaacacca cggagccgac gtaaaacagg
     4321 ccaatacgcc aaatcacact gttaatggct ttaggcacca tggtctgcgg atctttacat
     4381 tctccggcag ctgtacccac catttcaatg gaggcaaaag caaacactac gccctgaatc
     4441 aacaccagcg caggcagcaa accgtggggg aagaagccgc cattatcggt gattaaatga
     4501 aagccagtgg tgttgccatc cagcggctga ccactaccga ggaacactgt acccacgacc
     4561 aaaaaggtca caatggcgag cactttaata agcgcaaacc agaactccat ctccgcaaac
     4621 catttcacac cgatcatatt catggtgcca acgatggtaa gtgcagcgag cgcaaagacc
     4681 cactgcggca cgccgccaaa cgcaccccag taatgcatat acagagcgac ggcggtaata
     4741 tcaacaatcc ccgtcatcgc ccagttgatg aagtacatcc agccagcaac ataagcggct
     4801 ttctcaccca aaaactcacg ggcataagag acaaaactgc cactggaagg gcggtgtagc
     4861 accagctcac ccaatgcacg cagaataaaa aacgaaaaca agccacaaat taaataaacc
     4921 agtgccagtg ctggacccgc catttgcagt cgggctcctg cacctaaaaa caagccggtg
     4981 ccaatcgcgc cgccaatggc gatcatctgt acctggcgat tgcccatcgc tttgtgatac
     5041 ccctcttcgt gggcattaag ccagcggcgt ttcgcggcgt gttgatctga agtgtcggtg
     5101 tcgtgtttac tcattgctct ccctgattgc tttaatgaaa aagtcatata agttgccatg
     5161 aacaatgttt attcatcctg gcgatgatag ttatcaccat tattctttat gggtataaaa
     5221 ctatcggcgc agcatcctac ccgttatcga tatacgatgc aaaacatccc cttacaatcc
     5281 tgaaggggat tcatacaact gacgaaaaaa tgacaaatac ttttgctggt taacctgtgt
     5341 actgtcctac acttaatctt taaaagattg tgaggggcat atgattaagg tgtatggcgt
     5401 acccggatgg ggctctacaa tcagtgagct gatgctaaca ctggctgata ttccttatca
     5461 gttcgttgat gtcagtggtt ttgaccacga gggaacttca cgcgagttat tgaaaaccct
     5521 gaacccgttg tgtcagattc cgacactgac gctggaaaat gacgagatta tgacggagac
     5581 agcggcgatt gcattgatgg ttctcgatcg tcgcccggac cttgcgccac cggttgggcg
     5641 cgccgaacgt cagcagtttc aacggctatt ggtctggctg gttgctaatg tctatccaac
     5701 attcactttc gccgattacc ctgagcgttg ggctcctgac gcacctgaac agttaaagaa
     5761 gaatgttatt gaatatcgta aatcgcttta tatctggctg aattcacaat tgaccgctga
     5821 accttatgcg tttggtgagc aactaacgct ggtggactgt tatctttgca ctatgcgcac
     5881 atgggggcct gggcatgaat ggtttcagga taatgccacg aatatcagtg cgattgctga
     5941 tgctgtatgt cagttaccga aattacaaga agtattaaaa aggaatgaaa ttatttgagt
     6001 gggataccag aggattatgt tatttattat tcagtaactt tatccacaat gatgg
//
LOCUS       DADKRT010000216         6049 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.220, whole genome shotgun sequence.
ACCESSION   DADKRT010000216 DADKRT010000000
VERSION     DADKRT010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6049
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.220"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(24..392)
                     /locus_tag="JQ356_003793"
     CDS             complement(24..392)
                     /locus_tag="JQ356_003793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623734.1"
                     /translation="MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYIC
                     VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD
                     GKRSGKINQITTKMLFMCRE"
     gene            918..1613
                     /gene="minC"
                     /locus_tag="JQ356_003794"
     CDS             918..1613
                     /gene="minC"
                     /locus_tag="JQ356_003794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HAY4623735.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK
                     HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
                     EKAPRPAPAPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
                     GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
                     QLVENALTVQPLN"
     gene            1637..2449
                     /gene="minD"
                     /locus_tag="JQ356_003795"
     CDS             1637..2449
                     /gene="minD"
                     /locus_tag="JQ356_003795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HAY4623736.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
                     AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            2453..2719
                     /gene="minE"
                     /locus_tag="JQ356_003796"
     CDS             2453..2719
                     /gene="minE"
                     /locus_tag="JQ356_003796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HAY4623737.1"
                     /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
     gene            complement(3198..3317)
                     /locus_tag="JQ356_003797"
     CDS             complement(3198..3317)
                     /locus_tag="JQ356_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HAY4623738.1"
                     /translation="MPLSYAGYHHFIMMSLVSGEHNTPALSLQDESPGLVPAG"
     gene            complement(3278..3463)
                     /locus_tag="JQ356_003798"
     CDS             complement(3278..3463)
                     /locus_tag="JQ356_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623739.1"
                     /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYLKRVIFYPTTLQR
                     TAFKKCLFLMRDIIISS"
     gene            3564..3737
                     /locus_tag="JQ356_003799"
     CDS             3564..3737
                     /locus_tag="JQ356_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623740.1"
                     /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIED
                     EIIVRATYLIPDI"
     gene            3799..4083
                     /locus_tag="JQ356_003800"
     CDS             3799..4083
                     /locus_tag="JQ356_003800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HAY4623741.1"
                     /translation="MADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEK
                     GRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK"
     gene            4087..4422
                     /locus_tag="JQ356_003801"
     CDS             4087..4422
                     /locus_tag="JQ356_003801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmgD family protein"
                     /protein_id="HAY4623742.1"
                     /translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
                     AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
                     DTMRAIGKK"
     gene            complement(4479..>6049)
                     /locus_tag="JQ356_003802"
     CDS             complement(4479..>6049)
                     /locus_tag="JQ356_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001571933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY4623743.1"
                     /translation="LVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDD
                     SVVTHLTNSDSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRL
                     IVEGNTSGSTTVYVKNAGGSGAATLNGIELITVNGDESPAEAFRQGDARIAAGAFEYQ
                     LKQQGKNWYLTSYQSVNEEDNSSEGNSEPTETPTPVLRPEAGSYVANLAAANTLFVMR
                     LNDRAGEMRYIDPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLT
                     GGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSVRGYCAGLYATWFADDISKKGA
                     YIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQ
                     PQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPF
                     VEMNWIHNSKDFAVSMNGVKVEQDGASNLGEIKLGVNGNLNPAASVWGNVGVQLGDNG
                     YNDTAVMVGLKYKF"
BASE COUNT         1662 a         1396 c         1384 g         1607 t
ORIGIN      
        1 tagaacataa tgtaaacaag gcatcactca cgacacataa ataacatctt tgtggtgatt
       61 tgattgattt ttccactccg cttaccatcc acaccaaaat aacgatcatc acgacataat
      121 ttttctttaa catcgcaaaa tacaccgtta gcgaatgtaa attcgctggg atcgtagcct
      181 tgtaatgatt gtaagttttc agcggctttt tcgccgagat atttccttgt taactctggg
      241 gaaataccat ctgagttcac acaaatatac gggtcgcaaa caacgccgca cgccggagat
      301 tgaagtccgc cagcgtcatg tccagacgcc attgatgaga acatcatccc cacacctgac
      361 aatccgatat aaaaaatacg catcatattc atagcacatc ctgataatcc aaccgtacaa
      421 cacttatgct catttcatca tcaatccgta atcaaaaccg ctgacctgga cgagttacga
      481 tgacctgaca gaagtatcag acgtcttctg cggtttctat gattatgata gagcaattct
      541 atggcggata ttaagataac gggtatctgt tctttaatga tgctgcaaaa aatggaaagt
      601 taagaaagcc tggcgtggtg aaaaaataca cttgcctcaa tactggatat ttaaacaggt
      661 ctggagatgc tgtcacgatt agggtgcgga aaaaggaagc gtaaataaga acaatcaaaa
      721 gtacgacggc aatgggttga ttgacaaggg tattttttaa gctatgaatc agcgccattt
      781 atcacagaat agacttttac tctgaataaa tgggagggtg acttgcctca atataatcca
      841 gactataaca tgccttatag tcttcggaac atcatcgcgc gctggcgatg attaatagct
      901 aattgagtaa ggccaggatg tcaaacacgc caatcgagct taaaggcagt agcttcactt
      961 tatctgtggt tcatctgcat gaggcagaac ctaaggttat ccatcaggcg ctggaagaca
     1021 aaatcgctca ggcccccgca tttttaaaac atgcccccgt tgtactcaac gtcagtgcac
     1081 tggaagaccc ggtaaactgg tcagcgatgc ataaggcggt gtcggcaacc ggtttgcggg
     1141 ttattggcgt aagtggctgc aaagatgcgc aacttaaagc cgaaattgaa aagatggggc
     1201 tgcctatcct gacggaagga aaggaaaaag cgccgcgtcc agctcccgca ccacaggctc
     1261 cagcgcaaaa tacaacgccg gtcacaaaaa cgcgtttaat agataccccg gtgcgttccg
     1321 gtcagcgtat ttatgctcca caatgtgatc tgattgttac aagccacgtt agcgctgggg
     1381 ccgaattgat tgccgatggg aacattcatg tctatggcat gatgcgcggt cgtgcgcttg
     1441 caggggcaag tggtgaccgg gaaacgcaaa tattttgtac gaacctgatg gcggaactgg
     1501 tgtccatcgc aggtgaatac tggctgagtg atcaaatccc agcagaattt tatggcaaag
     1561 cggcgcgact gcagttagtc gaaaacgctt tgaccgttca accgttaaat tgatcccttt
     1621 ttaacaagga atttctatgg cacgcattat tgttgttact tcgggcaaag ggggtgttgg
     1681 taagacaacc tccagcgcgg ccatcgccac tggtttggcc cagaagggaa agaaaactgt
     1741 cgtgatagat tttgatatcg gcctgcgtaa tctcgacctg attatgggtt gtgaacgccg
     1801 ggtcgtttac gatttcgtca acgtcattca gggcgatgca acgctaaatc aggcgttaat
     1861 taaagataag cgtactgaaa atctctatat tcttccggca tcgcaaacac gcgataaaga
     1921 tgccctcacc cgtgaagggg tcgccaaagt tcttgatgat ctgaaagcga tggattttga
     1981 atttatcgtt tgtgactccc cggcagggat tgaaaccggt gcgttaatgg cactctattt
     2041 tgcagacgaa gccattatta ccaccaaccc ggaagtctcc tcagtacgcg attctgaccg
     2101 tattttaggc attctggcgt cgaaatcacg ccgcgcagaa aatggcgaag agcctattaa
     2161 agagcacctg ctgttaacgc gctataaccc aggccgcgta agcagaggtg acatgctgag
     2221 catggaagat gtgctggaga tcctgcgcat caaactcgtc ggcgtgatcc cagaggatca
     2281 atcagtgttg cgcgcctcta accagggtga accggtcatt ctcgacatta acgccgatgc
     2341 gggtaaagcc tacgcagata ccgtagaacg tctgttggga gaagaacgtc ctttccgctt
     2401 cattgaagaa gagaagaaag gcttcctcaa acgcttgttc ggaggataag ttatggcatt
     2461 actcgatttc tttctctcgc ggaagaaaaa cacagccaac attgcaaaag aacggctgca
     2521 gattattgtt gctgaacgcc gtcgcagcga tgcagaaccg cattatctgc cgcagttgcg
     2581 taaagatatt cttgaggtca tttgtaaata cgtacaaatt gatcctgaga tggtaaccgt
     2641 acagcttgag caaaaagatg gcgatatttc tattcttgag ctgaacgtga ccttaccgga
     2701 agcagaagag ctgaaataag cccgctgtaa aaacgcattt atcttcaagg cagagtcatt
     2761 tctgccttga gtttttcatc cctctcatcc acgttgtggt aaagcggcga gtattcttgc
     2821 tgatactcct cattgctatt tccacctccc cctttacacc ttaaggctgt tcccacgcac
     2881 agaacaaaat gtttatgcct ggttgagtaa ataacctcat tgttagtgtg gatacactgg
     2941 gggatgataa ccccgcaatt tcattattca ttgttctccc ataggatgag gtttcccgcc
     3001 gtaactggcg ggcttttttt gccccagaat tttccctttt agccccctgt aaacgaaaac
     3061 tgcgccgaag cgcagtttaa tcgttgatgg tcagaacgac cagttcacga tatatactgc
     3121 gggtatcgac tgatttcgat tccatgccat tggataaatg atagtagcgt ctaagtgacc
     3181 taagctctgc tgcaacatca gcccgcaggc accagaccag gggattcatc ctgaagagac
     3241 agcgcaggtg tattgtgttc accactcacc aaagacatca tgatgaaatg atgatatccc
     3301 gcataagaaa gaggcatttt ttaaacgcag tgcgctgaag tgtagttgga taaaaaatca
     3361 ctcttttcag ataatactgt cgtacgctta tctttcgaca atgaggccgt cggcaaaata
     3421 aaatgactaa tgtaatcgtt gctgatgaat atcttctgct cacataaaaa tcacacaata
     3481 atattgataa atcagattat cttaccttta caacattgcg ttaacagtca atgacacttc
     3541 ttgaataaaa atattgccaa tcaatgagtt attcctcatt taagattatt ctcattcacg
     3601 taaaaaacat aattcctatc atcacagcca cgctcatttt gaattatctg aataatagcg
     3661 agcgttcttt agttaagcag atcttaattg aagacgaaat tattgtgcgt gcaacttact
     3721 taataccgga catctaagtt gaagaaaaaa atacttgcct tcgggcttat ctcagcattg
     3781 ttctgctcca cgccagcgat ggcggatatg aatcgcacca cgaaaggtgc attgctaggc
     3841 gcaggcgttg gtttacttac tggcaatggt gttaatggcg tactgaaagg tgcagctgtt
     3901 ggcgctggtg ttggtgcagt aacagaaaaa ggccgcgacg gtaaaaatgc gcgtaaaggt
     3961 gcaaaagtag gtgccgccgt tggtgctgtc actggcgttc tgaccggcaa tggcctcgaa
     4021 ggggcgatta aaggtgccgt gattggcggt acgggtggtg caattctggg taaaatgaaa
     4081 taaggaatga tgatgaaaaa atttgcttta ctggcgggcc tgtttgtttt cgcaccaatg
     4141 acctgggcgc aggactacaa tattaaaaac ggtttaccgt cagaaaccta tattacttgc
     4201 gcagaagcca acgaaatggc aaaaactgac agcgcacagg ttgcagaaat tgttgcggta
     4261 atgggtaatg ccagcgttgc cagccgtgat ttaaaaattg agcaatctcc ggaactgagc
     4321 gccaaagtgg tagaaaaact gaatcaggtt tgcgctaaag acccgcaaat gctgttgatc
     4381 acggcaattg atgacaccat gcgtgctatc ggcaaaaaat aatatttcat atgtaccgcg
     4441 tcgatgaata cgacgcggtt ttttagctaa cggcgggatc agaacttata tttcaggccc
     4501 accatcactg cggtgtcatt gtagccatta tcacccagct gcacgcccac attcccccag
     4561 acgctggccg ctggattcag gttgccattt acgccaagtt taatttcccc caaattactc
     4621 gccccatctt gttcgacttt cacaccgttc attgagacag caaaatcttt actgttatgg
     4681 atccagttca tttcaacaaa aggttcaaag tcgtcaccgt gcggaccgct gtttttctcc
     4741 tgagtacgaa taaaggtgcg gaaaccaagt cgggtctgga tgttgttatt tgcgtcattc
     4801 tcaatacgtg agccattggc ttcggtgtgc gcattatgat cgacgcccat ccagatagcc
     4861 tgtgcctgtg gctggaatat ccacgtgtat ttcgccgctt ccagaccaaa ggatttattc
     4921 agggcaaagc cgtaacccgc ttccagcgag acggttgcgc ctttcgcact ataggattca
     4981 taggctaatt catccccttt caccgagttt ttaaaccagc tatattgcgc ccaggcgtca
     5041 atgtatgcgc cttttttact gatgtcatcg gcaaaccaag tggcatacag ccctgcgcaa
     5101 tagcctctga cactcccttt cgaacgataa tccgacacgc tggaatgagt tgagttgtag
     5161 tcgcgggcat aaccagccat cactcccaaa cgccaactgt cactgtcggt aaaaccaccg
     5221 gttaacagat cggcccctaa ctgcgagacg tagcgatgcg aggtcgttct caactgtccg
     5281 ttgctgtcac gccaggcatt atgcccgcca atttgacgta gccaaagtcg gcttgaacgc
     5341 tcctgttcag ttacaggatc gatgtagcgc atttcacccg cacggtcgtt cagacgcata
     5401 acaaaaagag tgttagcggc tgccaggttg gcgacgtaac ttccagcttc ggggcgcagg
     5461 acgggggtag gcgtttctgt tggttctgaa tttccctctg agctgttatc ctcctcattc
     5521 actgactgat aacttgtcaa ataccagttt ttgccttgtt gttttagttg atattcgaaa
     5581 gctccagctg caatccttgc atcaccttgt ctgaaggctt ctgctggaga ttcatcgcca
     5641 ttcacagtta tgagttcgat cccgtttagc gtggccgcgc cgcttcctcc agcatttttc
     5701 acatagacgg tagttgaacc cgaagtatta ccctcaacaa taagtctgtc cgtagccgat
     5761 ttatcatcac ctaatacggt gcggatatta agctgaccat tattaccgac ataattacct
     5821 tttacggtta atgtttttcc ttgggtaaat gtttgaccat catcatacga aagattgata
     5881 atactgtctg aattagtcag atgggtaaca acggagtcat ctttcatatt ccagattgta
     5941 ttttctgaaa gcttcagcgt ggttgtgccg ctaacgagtt tagtcgctcc atttagaata
     6001 gagtcggacg aaattatgtt taagtcacct ccagtattat taaccagaa
//
LOCUS       DADKRT010000217         6047 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.221, whole genome shotgun sequence.
ACCESSION   DADKRT010000217 DADKRT010000000
VERSION     DADKRT010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6047
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.221"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            401..805
                     /locus_tag="JQ356_003803"
     CDS             401..805
                     /locus_tag="JQ356_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012579059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiation protein"
                     /protein_id="HAY4623744.1"
                     /translation="MLHVAGEKRQHRRVSRICDTGDIPLPRSLTRYARSFGCGERYRL
                     TDGDGNFLEDTRKTLSKEEIRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRR
                     FPLVAPSCALLFLPFGLPVSFRCYGRGFSFHA"
     gene            1465..2280
                     /gene="sul2"
                     /locus_tag="JQ356_003804"
     CDS             1465..2280
                     /gene="sul2"
                     /locus_tag="JQ356_003804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HAY4623745.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            2367..2669
                     /locus_tag="JQ356_003805"
     CDS             2367..2669
                     /locus_tag="JQ356_003805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017831680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HAY4623746.1"
                     /translation="MVRKYFGTDGIRGKANEGAMTAETALRVGMAAGRVFRRGDHRHR
                     VVIGKDTRLSGYMLEPALTAGFTSMGMDVFLFGPLPTTYRKNKRPFHPSPTALDRS"
     gene            complement(2563..2814)
                     /locus_tag="JQ356_003806"
     CDS             complement(2563..2814)
                     /locus_tag="JQ356_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001445143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623747.1"
                     /translation="MLRSQRRGRDPPCWLSEKEPLVGKRRVNFQRCWLPVSRIGLHRR
                     GVERVNCGPKLLDLGEKGVYSSYTLSAAGQKGIRPCPSR"
     gene            complement(2845..4338)
                     /locus_tag="JQ356_003807"
     CDS             complement(2845..4338)
                     /locus_tag="JQ356_003807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HAY4623748.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRVADEPATPAQRRASMTWAQRLKRVFNIDIETCSGCGGAM
                     KVIACIEDPIVIKQILDHLKHKAETSGTRALPESRAPPAELLLGLFD"
     gene            complement(4382..4771)
                     /locus_tag="JQ356_003808"
     CDS             complement(4382..4771)
                     /locus_tag="JQ356_003808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623749.1"
                     /translation="MSTELNSGTVGGFGHMGPNDPYNDGHSGSGSSGGSFNGGGNGGH
                     DNSSGSSYTASFGLITGRHPITVPGTKNINSVDLSAVINNIIHHEGARNNMYLDTANN
                     VRVGVTGTGWQCLATAGISAEGKRTFR"
     gene            4941..5429
                     /locus_tag="JQ356_003809"
     CDS             4941..5429
                     /locus_tag="JQ356_003809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011161230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entry exclusion protein 1"
                     /protein_id="HAY4623750.1"
                     /translation="MFCCYNTVHTGDTVTFMAWHTVQETLKLTGKSRSQLYRDMAKGL
                     VSYRTGKNDRREFETSELIRAYGELRTSETPKRHKEGHSKSVVSQAENAQLDVIQQKL
                     DALQQTVTLMLEDKMAREAENRLRNEEREQLQAEISRLADALAQEKKRGFWSRLFRSG
                     SE"
BASE COUNT         1437 a         1663 c         1587 g         1360 t
ORIGIN      
        1 aaaaaaaagg aatatttcgt tttcacgagt aatacccggg tattaaaaat ccactgtaat
       61 tacatgaaaa taaagaaata aaaggtaata ccggagtatt accacgtacg cgggcaagcg
      121 aaaaagctat aacgcttccc ggccgacagg cgacccaaaa tccacagggg catgcaggtt
      181 ctcttcagta acctgcgcca ttaaatcaaa aaggtcatat tcgccgggaa gctgcgtatc
      241 agtcgaatcc agttgttcat catattcaga tggcatgggg tgatatccag tagctgagag
      301 gttgttagcg ggtttcgggg cgcagccctg aaccagtcat gtagcgctag cggagtgtat
      361 actggcttac tatgttgcca cgattgcgaa aatcagtgaa gtgcttcatg tggcaggaga
      421 aaaaaggcag caccggcgcg tcagcagaat atgcgataca ggagatattc cgcttcctcg
      481 ctcactgact cgctacgctc ggtcgttcgg ctgcggcgag cggtaccggc ttacggacgg
      541 ggacggaaat ttcctggaag ataccaggaa gacacttagc aaagaagaga taaggccacg
      601 gcgaagccgt ttttccatag gctccgcccc cctgacaagc atcgcaaaat ctgacgctca
      661 aatcagtggt ggcgaaaccc gacaggacta taaagatccc aggcgtttcc ccctggtagc
      721 tccctcgtgc gctctcctgt tcctgccttt cggtttaccg gtgtcattcc gctgttatgg
      781 ccgcggtttc tcattccacg cctgacactc agttccgtga aggcagttcg ctccaagctg
      841 gactgtatgc acgaaccccc cgttcagtcc gaccgctgcg ccttgtccgg taactatcaa
      901 cttgagtcca acccggaaag acacgacaaa acgccactgg cagcagccat tagtaacagg
      961 agtgcacgag aagatagatt aagaggtctt gaagtagagg cctgactgcg gctacactga
     1021 aagaacagtt ttggtaatgg cggtctcgtg aaccctgtta ccgggttaag cagttcccca
     1081 actgacttaa ccttcgaaca aaccgcctcc ccaggcggtt ttttcgttta cagagcaaga
     1141 gattacgatt cattgaaaag gatctcaaga agatcctttg tagattacta tcaattaatc
     1201 ttccgaacat gacaccagtc actgttgatt acggttaaac cgctccgtaa caggtttccc
     1261 tcgtattggt gacttgcagc accaaagaag caaaaaagat aaatatatct acttattgag
     1321 agatgatata tttatttcca aaatgctaca gatacatcat catgaaacgg atcaccgcaa
     1381 acaggttact cgcctgggga ttccctttcg acccgagcat ccgtatgaga ctcatgctcg
     1441 attattatta ttatagaagc ccccatgaat aaatcgctca tcattttcgg catcgtcaac
     1501 ataacctcgg acagtttctc cgatggaggc cggtatctgg cgccagacgc agccattgcg
     1561 caggcgcgta agctgatggc cgagggggca gatgtgatcg acctcggtcc ggcatccagc
     1621 aatcccgacg ccgcgcctgt ttcgtccgac acagaaatcg cgcgtatcgc gccggtgctg
     1681 gacgcgctca aggcagatgg cattcccgtc tcgctcgaca gttatcaacc cgcgacgcaa
     1741 gcctatgcct tgtcgcgtgg tgtggcctat ctcaatgata ttcgcggttt tccagacgct
     1801 gcgttctatc cgcaattggc gaaatcatct gccaaactcg tcgttatgca ttcggtgcaa
     1861 gacgggcagg cagatcggcg cgaggcaccc gctggcgaca tcatggatca cattgcggcg
     1921 ttctttgacg cgcgcatcgc ggcgctgacg ggtgccggta tcaaacgcaa ccgccttgtc
     1981 cttgatcccg gcatggggtt ttttctgggg gctgctcccg aaacctcgct ctcggtgctg
     2041 gcgcggttcg atgaattgcg gctgcgcttc gatttgccgg tgcttctgtc tgtttcgcgc
     2101 aaatcctttc tgcgcgcgct cacaggccgt ggtccggggg atgtcggggc cgcgacactc
     2161 gctgcagagc ttgccgccgc cgcaggtgga gctgacttca tccgcacaca cgagccgcgc
     2221 cccttgcgcg acgggctggc ggtattggcg gcgctgaaag aaaccgcaag aattcgttaa
     2281 ctgcacattc gggatatttc tctatattcg cggttcagca ggcatgtccc ctttgagggc
     2341 gacccgacga caggataatc gaccttatgg tgcgcaaata tttcggcaca gacggtattc
     2401 gtggcaaagc caacgaaggc gcgatgacgg cggaaaccgc cttgcgcgtc ggcatggcgg
     2461 ctggccgtgt ctttcgtcgc ggtgaccacc gccatcgtgt cgtgatcggc aaggatacgc
     2521 gcctgtcggg ctatatgctt gaacccgcgc tcacagccgg tttcacctcg atgggcatgg
     2581 acgtattcct ttttggcccg ctgccgacaa cgtataggaa gaataaacgc ccttttcacc
     2641 caagtccaac agctttggac cgcagttgac tctttcgaca cccctgcgat gcaacccaat
     2701 ccggctgacg gggagccagc aacgctgaaa atttaccctc ctctttccca ctagcggctc
     2761 cttttccgac aaccagcacg gcggatccct gccgcggcgc tgtgaacgca gcattttgat
     2821 tggtatcgtt ggccttcagg ctcgtcagtc aaacagaccc aggagcagct cagccggtgg
     2881 cgcccggctt tcgggtaacg ccctggtccc gctggtttcg gctttgtgct tcaggtgatc
     2941 aaggatctgc ttgatcacta tagggtcttc aatgcaggcg atgactttca tggcgccgcc
     3001 gcagccgctg caggtctcga tgtcgatatt gaaaacacgc ttgagccgtt gcgcccatgt
     3061 catcgacgct cgccgttgtg ctggtgttgc cggttcatca gccaccctga ccttgttgcc
     3121 cctgccccgt tttgccggcg tgaccaacgc ccggtgccga ctgttgggtg cgaacacccc
     3181 gtggaagcgg gttaggttga ctctgggctt cggtaccagg gcggccagcc ttgcaatgaa
     3241 atccaatggt tcgaaaatga cgtgcgtggt gccgtcccgg tacggcgtct tgagctggta
     3301 gcgcacgttg ccgcctcgtg ttaacgacag ccgcttctcg gataccgccg ggcggctgat
     3361 gtaccggcac agccgttcga gcttcttgcg ttcatcggcc ctggccgcca cgccggcgtg
     3421 caggctggac ccggctacct tgccaatccc gtcaccgaac ggatcaccac tggtcggcag
     3481 agtttgcaaa gtgaacacct ttcgccccgc ctgtgaaccg acagcgatac ggtaagtgat
     3541 cgagtgcccc agcaggggtg tcatcgggtc gtcatccacc gcatccgagg ccagatagct
     3601 gttttcgaca tcccgttcca gcaggccttg ccgttccaga tagcgaccca cccggtgggc
     3661 gatggtgtgc gtcagctggg tgagctctgg gctggtcggc gccttgaccc agcggaaacg
     3721 cgctgagccg tgggattgct cgacatacac accgtcgaga aacagcatgt ggaagtgaac
     3781 attcagattg agcgccgatc caaaacgctg gatcagggtg accgcgcccg tcttggccac
     3841 ttggtgggta tggcccgctt tcttgaccag gtgcgtggca atgacgcggt aaacgatgcc
     3901 cagcacccac cccatgatct cgggccggct ggcaaacagg aaacgcagct gaaacgggaa
     3961 gctcaacacc cactgacgca tgggttgttc aggcagtact tcatcaacca gcaaggcggc
     4021 actttcggcc atccgccgcg ccccacagct cgggcagaaa ccgcgacgct tacagctgaa
     4081 agcgaccagg tgctcggcgt ggcaagactc gcagcgaacc cgtagaaagc catgctccag
     4141 ccgcccgcat tggagaaatt cttcaaattc ccgttgcaca tagcccggca attcctttcc
     4201 ctgctctgcc ataagcgcag cgaatgccgg gtaatactcg tcaacgatct gatagagaag
     4261 ggtttgctcg ggtcggtggc tctggtaacg accagtatcc cgatcccggc tggccgtcct
     4321 ggccgccaca tgaggcatgt tccgcgtcct tgcaatactg tgtttacata cagtctatcg
     4381 cttagcggaa agttctttta ccctcagccg aaatgcctgc cgttgctaga cattgccagc
     4441 cagtgcccgt cactcccact cttacattgt tcgcagtatc taggtacatg ttattgcgtg
     4501 caccttcatg atgtataatg ttattaatga cagcagaaag atcgacagaa ttaatattct
     4561 tcgtacctgg gacagttatc gggtgtcggc cagtgatgag accaaaggat gcagtataag
     4621 atgaaccact actattatca tggccaccat taccaccacc gttaaaacta cctcccgaac
     4681 ttccagagcc gctatgacca tcattgtagg ggtcatttgg tcccatgtga ccaaaaccac
     4741 cgacagtacc gctatttaac tctgtactca taaaattatc ctctttgact tttaaaaaca
     4801 gcaaaaactg tatttataac aatgtgttta tatacagtat tcgaaatact acgcccgtca
     4861 aaaccacacc gtcaacaggt tttttgtgta tttttcacgc ctcacgggca gcctcagacc
     4921 ttttgtgtta aaacagtaat atgttctgct gttacaatac ggtacacaca ggagacactg
     4981 tcacttttat ggcatggcac acagttcaag agacactgaa attaacagga aagtcgcgct
     5041 cgcaattata tcgtgacatg gctaaaggcc ttgtcagcta tcgcacagga aaaaatgatc
     5101 gccgggagtt cgagaccagt gaactgattc gggcctatgg cgagctgcgc acttctgaga
     5161 caccaaaaag gcacaaggag ggacactcca aatctgtcgt tagccaggcg gaaaatgctc
     5221 agctagacgt cattcagcag aaactggacg ctctgcagca gactgttacc ctaatgcttg
     5281 aagacaagat ggcgcgggaa gcagaaaacc gcctgcgaaa tgaggagagg gaacaactac
     5341 aggccgaaat tagccgtctg gctgacgcgc tggcacagga aaaaaagcgg ggattctggt
     5401 cgcggctgtt tcgctccggt tcagagtaac agtgcaggtg actctgattt accataacat
     5461 ctgttatcag caccgcctga gaggccctca gggcgtttct gacgggaaac cggtaaaaca
     5521 ggcaacaaac cacccgaaaa cccgccagaa acgcgcaggc tctgttttta cggcatgcat
     5581 gagtatgcgc acaagtgcat agcgcggaaa ttcacaccat tcagccgggg taagtcctgt
     5641 ttccggcgtt cttcccatcc gaaaacggtg aacggggacg caatttattg cgtggccgtg
     5701 aagcgttgcc ggcgcagccg gaaaacccgc tgtcagcacg ttcaggaagg gggtgatgta
     5761 caaatggcac agaggatgaa agtgacgtat gagctgaagg aatgatgtaa aagtgatgta
     5821 taagtgatgt aaaagtgatg tatgaactga aggagcgatg taattctgta gtcaggaaga
     5881 ataacccgtt catgcaggca tgaacgatac agtgaggaac gctttttttg tcacgatctc
     5941 cccttaacct gcgtaaatca cccgccatgg ttgattattt ttcaacctca aaatggtcat
     6001 acacctaacg cagccgcgat tttcatcgca actgcatgaa ttaaaag
//
LOCUS       DADKRT010000218         5911 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.222, whole genome shotgun sequence.
ACCESSION   DADKRT010000218 DADKRT010000000
VERSION     DADKRT010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5911
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.222"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..406)
                     /gene="dsbG"
                     /locus_tag="JQ356_003810"
     CDS             complement(<1..406)
                     /gene="dsbG"
                     /locus_tag="JQ356_003810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415137.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HAY4623751.1"
                     /translation="MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGM
                     KGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRME
                     QSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQ"
     gene            778..1341
                     /gene="ahpC"
                     /locus_tag="JQ356_003811"
     CDS             778..1341
                     /gene="ahpC"
                     /locus_tag="JQ356_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HAY4623752.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            1512..3077
                     /gene="ahpF"
                     /locus_tag="JQ356_003812"
     CDS             1512..3077
                     /gene="ahpF"
                     /locus_tag="JQ356_003812"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415139.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HAY4623753.1"
                     /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ
                     NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV
                     GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH
                     VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE
                     DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
                     DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG
                     LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS
                     LSAFDYLIRTKTA"
     gene            complement(3198..3626)
                     /gene="uspG"
                     /locus_tag="JQ356_003813"
     CDS             complement(3198..3626)
                     /gene="uspG"
                     /locus_tag="JQ356_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HAY4623754.1"
                     /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLTQDDGVIHLLHVLPGSA
                     SLSLDRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
                     ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
     gene            3847..5085
                     /locus_tag="JQ356_003814"
     CDS             3847..5085
                     /locus_tag="JQ356_003814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
                     /protein_id="HAY4623755.1"
                     /translation="MKALTYHGPHHVQVENVPDPGIEQADDIILRITATAICGSDLHL
                     YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRMQQYA
                     ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL
                     SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD
                     HHPYRLSFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTET
                     VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT
                     HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQS
                     AEEAQKAVSGLVNAMPGGTI"
     gene            complement(5316..5726)
                     /gene="rnk"
                     /locus_tag="JQ356_003815"
     CDS             complement(5316..5726)
                     /gene="rnk"
                     /locus_tag="JQ356_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HAY4623756.1"
                     /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
                     SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
                     VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL"
BASE COUNT         1524 a         1408 c         1533 g         1446 t
ORIGIN      
        1 cctgctgcca gaactgttta caatatgggc agaacggatc ggcgaagacg tagacaatga
       61 ccggcgcatc ttttttaccg tcgaggagcc agtgggattg ttccatccgt tgccacattt
      121 cgcgtccggc tggtgcgtaa atttcttttt cgataagtgt gttactcagg ttttcacctt
      181 tctcgttgta catgtaacca gagatagcgt gcttaccatc tggagtcagg tagatggtga
      241 cgcccatatc ctgatacttt ccgagataac ctttcattcc tccgggggca tcgaacgttt
      301 tgatgattgt aatgccctgt ttttcaatcg cttttactgg agcaggaagt tcctctgcga
      361 aggcgattgc aggaagcaga gccagtaaaa gtatcttttt taacattaat ttgtcctttt
      421 cagtcagtgc aaaagtcgag taaaaggcat aacctatcac tgtcataggt aagagcttag
      481 atcaggtgat tgccctttgt ttatgagggt gttgtaatcc atgtcgttgt tgcatttgta
      541 agggcaacgc ctcagcctgc aggcaggcgc tgaagatacc aaagggtagt tcagattaca
      601 cggtcacctg gaaagggggc cattttactt tttatcgccg ctggcggtgc aaagttcaca
      661 aagttgtctt acgaaggttg taaggtaaaa cttatcgatt tgataatgga aacgcattag
      721 ccgaatcggc aaaaattggt taccttacat ctcatcgaaa acacggagga agtatagatg
      781 tccttgatta acaccaaaat taaacctttt aaaaaccagg cattcaaaaa cggcgaattc
      841 atcgaaatca ccgaaaaaga taccgaaggc cgctggagcg tcttcttctt ctacccggct
      901 gactttactt tcgtatgccc gaccgaactg ggtgacgttg ctgaccacta cgaagaactg
      961 cagaaactgg gcgtagacgt atacgcagta tctaccgata ctcacttcac ccacaaagca
     1021 tggcacagca gctctgaaac catcgctaaa atcaaatatg cgatgatcgg cgacccgact
     1081 ggcgccctga cccgtaactt cgacaacatg cgtgaagatg aaggtctggc tgaccgtgcg
     1141 accttcgttg ttgacccgca gggtatcatc caggcaatcg aagttaccgc tgaaggcatt
     1201 ggccgtgacg cgtctgacct gctgcgtaaa atcaaagcag cacagtacgt agcttctcac
     1261 ccaggtgaag tttgcccggc taaatggaaa gaaggtgaag caactctggc tccgtctctg
     1321 gacctggttg gtaaaatcta aatttccttc gtctttcgcg ctaccaactc cggcgcgaaa
     1381 tacttcggaa attcacctaa ttcttcgggt gctgcggcac ccgattttct tccccgcact
     1441 atgatgcaag ctgcatccag gtagccgtag aggccgcttg catgatgatg tttaaagccc
     1501 aggagataaa catgctcgac acaaatatga aaactcaact caaggcttac cttgagaaat
     1561 tgaccaagcc tgttgagtta attgccacgc tggatgacag cgctaaatcg gcagaaatca
     1621 aggaactgtt ggctgaaatc gcagaactgt cagacaaagt cacctttaaa gaagataaca
     1681 gcttgccggt gcgtaagccg tctttcctga tcaccaaccc aggttccaac caggggccac
     1741 gttttgcagg ctccccgctg ggccacgagt tcacctcgct ggtactggcg ttgctgtgga
     1801 ccggtggtca tccgtcgaaa gaagcgcagt ctctgctgga gcagattcgc catattgacg
     1861 gtgattttga attcgaaacc tattactcgc tctcttgcca taactgcccg gacgtggtgc
     1921 aggcgctgaa cctgatgagc gtactgaacc cgcgcatcaa gcacactgca attgacggcg
     1981 gcaccttcca gaacgaaatc accgatcgca acgtgatggg cgttccggca gtgttcgtaa
     2041 acgggaaaga gtttggtcag ggccgcatga cgttgactga aatcgttgcc aaaattgata
     2101 cgggcgcgga aaaacgtgcg gcagaagagc tgaacaagcg tgatgcttat gacgtattaa
     2161 tcgtcggttc cggcccggcg ggtgcagcgg cagcaattta ctccgcacgt aaaggcatcc
     2221 gtaccggtct gatgggcgaa cgttttggtg gtcagatcct cgataccgtt gatatcgaaa
     2281 actacatttc tgtaccgaag actgaagggc agaagctggc aggcgcactg aaagttcacg
     2341 ttgatgaata cgacgttgat gtgatcgaca gccagagcgc cagcaaactg atcccagcag
     2401 cagttgaagg tggtctgcat cagattgaaa cagcttctgg cgcggtactg aaagcacgca
     2461 gcattatcgt ggcgaccggt gcaaaatggc gcaacatgaa cgttccgggc gaagatcagt
     2521 atcgcaccaa aggcgtgacc tactgcccgc actgcgacgg cccgctgttt aaaggtaaac
     2581 gcgtagcggt tatcggcggc ggtaactccg gcgtggaagc ggcaattgac ctggcgggta
     2641 tcgttgagca cgtaacgctg ctggaatttg cgccagaaat gaaagccgac caggttctgc
     2701 aggacaaact gcgcagcctg aaaaacgtcg acattattct gaatgcgcaa accacggaag
     2761 tgaaaggcga cggcagcaaa gtcgttggtc tggaatatcg agatcgtgtc agcggcgata
     2821 ttcacaacat cgaactggcc ggtattttcg tgcagattgg tctgctgccg aacaccaact
     2881 ggctcgaagg cgcagtcgaa cgtaaccgca tgggtgagat tatcattgat gcgaaatgcg
     2941 aaaccaacgt caaaggcgta ttcgcagcgg gtgactgtac gacggttccg tacaagcaga
     3001 tcatcatcgc cactggcgaa ggtgccaaag cctctctgag tgcttttgac tacctgattc
     3061 gcaccaaaac tgcataagaa gaagtaagat tcacctgcaa ttgcttagcc gccggggtca
     3121 aacctagcgg cttttttatg gcattaaaaa gccctgccgg gatgttccag gcagggcggc
     3181 ataaatactt ttatctgtta gcgaacgacc agtacaggca gattggcgtg gcggatcacg
     3241 ctcgaggcgt tagaacctaa cagatgggtc gaaatcgatg ggttgcgaga accgataact
     3301 acaacatcag cccccagttc ttctgccaac tcattgactt catcccgcac gctaccaaaa
     3361 cggacatgtt gtttaatgcg ggaaggatcg atggtgaagt ggctgaccat cgtttgcaga
     3421 cgttcttctg cttcatgttg cagatgctct tcaaaacgac gcacatcagc ggcaaaacgg
     3481 tccaggctca ggctggctga cccgggtagt acgtgaagta gatgaataac tccgtcatcc
     3541 tgggtgagga attcagcgtg gcgaacagct ttgtcgctca attccatttc aaatacatca
     3601 actggcataa tgattgtctt atacataacc ctttctccct gttaatcatg aacaaatcat
     3661 tcgccatgat tataatattt atccctgata tttgtctggt tctttttcct tacgaacggt
     3721 ttctgtgatt aatatattct cactgaacac caggaattct cccaaaacct gcggtaccgc
     3781 ccgttttccc gctgtgatag ctacccttaa agactgactc ttttttgaac tgtctctgga
     3841 ggttgcatga aagcattgac ttatcacggc ccacatcacg ttcaggtaga aaatgttccc
     3901 gatccgggca ttgaacaggc agatgatatt attctgcgta ttacggcaac ggcgatctgt
     3961 ggctctgatc tccatcttta tcgaggcaaa ataccccagg ttaaacatgg cgatattttt
     4021 ggtcatgaat ttatggggga agtcgttgaa accggaaagg acgtaaaaaa tttgcaaaaa
     4081 ggcgaccggg tggtaattcc gtttgtcatt gcttgtggcg actgtttttt ctgtcgaatg
     4141 cagcaatatg ccgcctgcga aaataccaat gcgggtaaag gcgctgcgct caataaaaaa
     4201 cagataccag ctcccgcggc attgtttggt tatagtcacc tgtatggtgg cgttcctggt
     4261 ggacaggcgg aatatgtccg cgtccctaaa gggaatgtgg ggccgtttaa agtaccgcct
     4321 ttgctttcag atgataaagc ccttttcctt tctgatattc tgccaacggc atggcaggca
     4381 gcaaaaaatg cgcagatcca acaaggttca agcgttgcag tctatggtgc cggtccagtg
     4441 ggattgttga caatcgcctg tgcacggttg ctcggtgcgg aacagatttt tgttgttgat
     4501 catcatccct accgcttgag tttcgccgct gaccgctacg gcgcgatccc gattaatttc
     4561 gatgaagata gcgatccggc acagtcaatt attgaacaaa cggcaggtca ccggggcgtg
     4621 gatgcagtaa tagacgccgt cggttttgaa gcgaaaggca gcaccacgga aacggtgctg
     4681 actaacctga aactggaggg cagcagcggt aaagcgttgc gccagtgtat tgcggcggtc
     4741 aggcgtggcg gcattgttag cgtaccgggc gtctacgctg gatttattca cggtttcctg
     4801 tttggtgacg cctttgataa agggttgacg tttaaaatgg gacagaccca cgttcacgca
     4861 tggctgggag aattattacc gttaattgag aaaggattac tgaaaccaga agaaattgtt
     4921 acccactata tgccgtttga agaggccgcc cggggatatg agattttcga aaaacgtgaa
     4981 gaggagtgcc gtaaggtgat tctggtaccc ggtgcacaaa gcgcagagga ggcgcagaag
     5041 gcagtttcag gtctggtgaa tgcgatgccg gggggaacaa tatgatcgtc aggagtggtt
     5101 ttcgaggtaa aggacagcca tgacgataat cgccgccata atcagaaatc ctatcaggat
     5161 gtaaaatgct tctgccatgg ttattcccac aaacgaaacg gaataatttt gcagcaaaag
     5221 tgaacagtga gaaccaggaa aaattgctga ttttgcgtaa agaggatgcg agtgcatcct
     5281 ctgggcaaag cgagttatcg cttgtgctga tgggattaaa gcaggtagtc gccagcagct
     5341 tctggctggt attcgagttc cagcacttca aggtgggttg caacgccgcc cggaagttcc
     5401 cagtgaatgg aatcgccaac gcgcagcccc agcagtgcgg cacctaccgg agccataacg
     5461 gaaagctgag tattgctatc ggtcattttt gccggataca ccagcgtgcg cacacgcact
     5521 tcgccatcgc taagattgcg gaatttaacc cggctgttca ttgtcaccac gtcgtgtggc
     5581 atctcttctg gcgaacacat ttgggcgcga tccaactctg cgtttaacgc gtcggcgatt
     5641 ggcaaaccag cataggcggg ttgctccagc agaatatcga tgcgttcggc atccaggtcg
     5701 ttaatgatga tagttggtct ggacattttt actccatgtc gtcggtactg cgagtgtcgc
     5761 agataaacat acccaaaaga aaaccctcac cgtcaggcgg cgagggttta actcacatga
     5821 tgatactgac tgttgctcac tctttgaagt gatttgcgtc acattcaggg aattcctcaa
     5881 tgcagcgcat tatgtataat tcttaatcgt c
//
LOCUS       DADKRT010000219         5892 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.223, whole genome shotgun sequence.
ACCESSION   DADKRT010000219 DADKRT010000000
VERSION     DADKRT010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5892
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.223"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1264
                     /locus_tag="JQ356_003816"
     CDS             <1..1264
                     /locus_tag="JQ356_003816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HAY4623757.1"
                     /translation="ADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQMDGLETVLA
                     AMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALAR
                     RKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDVKLAQWIEDNVTFPSTMVDRIV
                     PAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPY
                     EEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVD
                     LQDYANRLIERYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVA
                     GWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNS
                     LFTAKVTEAYLSLLAHGAKATVAKYSVK"
     gene            complement(1300..1503)
                     /gene="ydfZ"
                     /locus_tag="JQ356_003817"
     CDS             complement(1300..1503)
                     /gene="ydfZ"
                     /locus_tag="JQ356_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HAY4623758.1"
                     /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
                     KTVVVEGCEEKLAPLDLIRLGMN"
     gene            complement(1680..2364)
                     /locus_tag="JQ356_003818"
                     /pseudo
     CDS             complement(1680..2364)
                     /locus_tag="JQ356_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310176.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
     gene            complement(2453..3199)
                     /gene="ydfG"
                     /locus_tag="JQ356_003819"
     CDS             complement(2453..3199)
                     /gene="ydfG"
                     /locus_tag="JQ356_003819"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HAY4623759.1"
                     /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL
                     GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM
                     IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
                     VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
     gene            3336..5381
                     /gene="dcp"
                     /locus_tag="JQ356_003820"
     CDS             3336..5381
                     /gene="dcp"
                     /locus_tag="JQ356_003820"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HAY4623760.1"
                     /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
                     AIALNPQTPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
                     ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV
                     LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
                     IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQAKLL
                     GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
                     WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
                     PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHPVIYNVCNYQ
                     KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
                     ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
                     NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
                     GYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLYRQWRGKAPQIMPMLQHRGLNI"
     gene            complement(5426..>5892)
                     /locus_tag="JQ356_003821"
     CDS             complement(5426..>5892)
                     /locus_tag="JQ356_003821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HAY4623761.1"
                     /translation="NLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGA
                     GFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGLE
                     GGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFAHVQLLQLLL"
BASE COUNT         1458 a         1425 c         1528 g         1481 t
ORIGIN      
        1 tgccgattta caacagcaag ataatcttta taccgttgcg gaaatgtcgg ccgatgcgtg
       61 gacggctcgc gtcgttggcg tcgttaaaaa agccttgcac gtacagatgg atggcttaga
      121 aaccgtgttg gctgcgatgt gtgaaccgca aatcgcgatt gtctctctga caatcaccga
      181 aaaagggtat ttccactctc cggcgaccgg acagttaatg ctcgatcacc cgatggtcgc
      241 tgccgacgtg caaaatcccc accagccgaa aacagcaaca ggggtgattg ttgaggcgct
      301 ggcccgccgt aaagcggcag gacttcccgc atttaccgtc atgtcatgtg acaacatgcc
      361 agaaaacggt catgttatgc gtgacgttgt cacttcatac gcgaaagctg ttgatgtaaa
      421 actggcacaa tggatcgaag ataacgtgac tttcccatca acaatggtgg accgtattgt
      481 gcccgcagtg acagaggata cgctggcgaa aatcgaacaa cttaccggtg tgcgcgatcc
      541 tgcgggcgtt gcctgtgaac ctttccgcca gtgggtaata gaagataact ttgttgccgg
      601 acgtccagaa tgggaaaaag cgggagccga actggttagt gatgtgctgc cttatgaaga
      661 gatgaagttg cgcatgctca acggcagtca ttcattcctg gcgtatttgg gttatcttgc
      721 cggatatcag cacattaatg actgcatgga agatgaacat tatcgttatg cggcgtatgg
      781 cttgatgttg caggaacaag cgccgacgct gaaagtgcag ggcgttgatt tgcaagatta
      841 cgctaaccga ttaattgaac gctatagcaa tccggcgtta cgtcatcgaa cctggcagat
      901 tgcgatggat ggtagccaga aattgccaca gcggatgttg gattctgttc gctggcatct
      961 ggcgcatgac agcaagttcg atctgctggc gctgggcgtc gcgggttgga tgcgttatgt
     1021 cggtggtgtt gatgaacagg gaaatccgat agaaatcagt gacccactgt tacctgttat
     1081 tcagaaggct gtacaaagta gtgccgaagg gaaagcgcgc gtccagtcat tgctggcgat
     1141 taaggcaatc tttggtgatg atttgccaga caatagcttg tttactgcaa aagtgacgga
     1201 agcgtacttg tctttattag cgcatggcgc gaaagcgacc gtggcgaaat attccgtgaa
     1261 gtaaaaaaag caatgccgcc atcggcggca ttcacacact tagttcatgc cgagacgaat
     1321 caggtccaga ggtgccagtt tctcttcaca accttcaaca actacggttt ttccgcggcg
     1381 gatttgctca gcggtcagac cttcagtatc aatcgacagg atcttgccag tgtgaccggt
     1441 gccgctaacc ataacacggc tgccagtggt gattgcgtta cggttacgat cgtaggtcgt
     1501 cataggtgtt ttctcctttc tgatttacag tcgaagccca cgtaacgggc gcaatataaa
     1561 tactcctgtc gagtgaaata ttttttgttt ttgatcaagc tcacatcttt tttgatgcat
     1621 gcatgagccg taaggcgggg gaaaagcctc tcatcccgga tgggatgaga gtaaatgaat
     1681 tactcttcgc taaaccagtc gctgttttcc tggcggatct ggccacggat tcgctgattt
     1741 cctgcaaatg ttgcgtcatt gcacgttcta ccgcatcgcc atcacgtttt tgcagggcag
     1801 agaaaatatc aagatgctgg cgtaacagca tttctggtgg agaaacatgg tcgaaactca
     1861 tatagcgcac gcgatcaacg gtcgctttca ggttctcaat ggtatcccac gccagttgac
     1921 agtcggcaat ctgcgtcagg agttgatgga agttgtcatc aagttcaaaa aatcatccag
     1981 ttgcttgtgc tcaatggcaa tgcgttgctg gtgaagattt tgttccagtt ggtagcactg
     2041 gctttcggta atcatgctcg ccgcccgacg cgccaccgcg cactcaatgg cctgacggat
     2101 aaaactgccg ttgcgcacct gggccatgga aattttgttg acgtagctgc cacgctgtgg
     2161 acgaatttga atcaggccgt tttccgccag tttaataaag gcttcacgaa ccggctggcg
     2221 tgacacattg aaacgaacag aaacttcttt ttccgacaac ggtgtgcctg gagcaatcag
     2281 gcaatggaca atgtcgcgac gaaggatacg ataaatttgc tgattgacag gctgtgtggg
     2341 attaagttgc gtttcgacgg tcattcgttc ttgcttgtga gtgagttaac tgcatgagtc
     2401 taccactttt ttgtgacaag caataacccg gcagttacgc cgggtataaa aattactgac
     2461 ggtggacatt cagtccggca tagctttggg taaccggcat catttccagg gtattgatat
     2521 tgacgtgagc aggcagcgtt gacacccacc aaacggcttc gctgacatct tctggcgtca
     2581 atgcaacggt attttgatag gttttttccg ctttaccgtc atcgccttta aagcggacat
     2641 tggaaaactc ggtgccaccc accagacccg gttcgatgtc ggtgacgcgc accgccgtac
     2701 catgcaggtc cgtacgcaga ttcaggctaa actgacgaac aaacgctttc gtcgcaccgt
     2761 aaacgttacc accggcataa ggccagctac ctgccgttga gccaatgtta ataatatgac
     2821 catgattacg ttcaaccata cccggtaaga cggcgcgcgt catatatacc aggcctttgt
     2881 tgttggtatc aatcatcgtt tcccagtctt caacgctggc tttatgcgca ggctccatgc
     2941 ccaacgccag gccggcatta tttaccagga tatcaatatt gcaccactcg gcaggaagcg
     3001 atgccagcat ctcttcaata gcggcgcggt tgcgaacgtc cagttgggcg atgtacagat
     3061 tatctcccag ttcgtctttt aactcctgca accgttcctg gcgacggcca gtggcgataa
     3121 ctttatgccc ttgttgaata aaacgacgag taatgcattc accaaaacct gccgttgctc
     3181 cagttactaa aacgatcatc tcactgttcc tcaacgcttt tgtgtgtcaa taacatagca
     3241 cgtgatgctt aagagcgggt aatactggtt tgtaagattg cactccgtta tcagtaagcc
     3301 tacgctatgg aacacctcgc gttcaggaga agaaaatgac aacaatgaat cctttccttg
     3361 tgcaaagcac actaccgtat ctggctcccc attttgatca aattgccaat catcactatc
     3421 gcccggcatt cgatgaggga atgcagcaaa agcgggcaga aattgctgcc atcgcgctta
     3481 acccgcaaac gcctgatttc aacaatacta ttctggcact ggaacaaagc ggagaattac
     3541 ttacccgcgt taccagcgtc ttttttgcga tgactgcggc gcataccaat gatgaattac
     3601 agcgtcttga tgaacagttt tccgctgaac tggcggaact ggctaatgat atctatctga
     3661 acggtgaatt attcgcgcgg gtagatgctg tctggcagcg ccgtgaatcc ctggggcttg
     3721 atagtgaatc catccgcctg gtggaggtga ttcatcaacg ttttgtcctt gccggagcca
     3781 aacttgcgca agctgataaa gcaaaattaa aagtactgaa tacagaagct gcgaccctga
     3841 ccagccagtt taaccagcga ttactggcag caaataaatc cggcggtctg gttgtgaacg
     3901 atatcgcgca gctggcagga atgagtgagc aagagattgc gctggcggca gaggcggctc
     3961 gcgagaaagg tctggataac aaatggctga ttccgctgct gaataccacc caacaaccgg
     4021 cgcttgccga gatgcgcgat cgtgcgacgc gtgaaaaact gtttattgcg ggctggacgc
     4081 gagcggaaaa aaatgatgcc aatgataccc gcgctatcat tcaacgtctg gtagagattc
     4141 gcgcacagca ggcgaaactg cttggttttc ctcattatgc cgcatggaaa atcgccgatc
     4201 agatggcaaa aacgccagaa gcagcactca actttatgcg ggaaattgtt ccagcggcgc
     4261 gtcaacgtgc tagcgatgaa ttagcctcca tacaggcggt tatcgataag cagcaaggcg
     4321 ggtttagcgc gcagccgtgg gactgggcat tttatgccga acaggtacgg cgggagaaat
     4381 ttgatcttga tgaggcgcag ctcaagccat attttgaatt aaacacggtg ttgaatgaag
     4441 gtgtattctg gaccgcgaat cagctcttcg gtattaagtt tgtcgaacgt tttgatattc
     4501 ctgtctacca tcctgacgtt cgtgtgtggg aaatttttga tcataatggc gtgggactgg
     4561 cgttatttta cggtgatttc ttcgcccgtg attcaaaaag cggcggtgca tggatgggca
     4621 attttgttga gcaatcaacg cttaatgaaa cgcatccggt aatttataac gtttgcaatt
     4681 atcagaaacc cgctgccggt gagcctgcgt tgttactctg ggatgatgtc ataaccttat
     4741 tccatgaatt tggtcatacg ctgcacggcc tttttgcccg ccagcgttat gccacgcttt
     4801 ccggcaccaa cacgccgcgt gattttgtcg aatttccgtc gcaaatcaac gaacactggg
     4861 caacgcatcc gcaggtattc gctcgctacg cccggcatta tcagagcggg gcagcaatgc
     4921 ctgacgaact gcaacagaaa atgcgtaatg ccagcctgtt caacaaaggg tatgagatga
     4981 gcgaactgct tagcgccgca cttctcgata tgcgctggca ttgcctggaa gaaaacgaag
     5041 caatgcagga tgtcgatgat tttgaattgc gggcgctggt ggcggaaaat atggatcttc
     5101 ctgctatacc gccacgctat cgcagcagtt atttcgccca tatttttggt ggcggatatg
     5161 ctgcaggtta ttacgcttat ctgtggacgc aaatgttggc cgatgatggt taccagtggt
     5221 ttgttgagca gggcggatta acgcgtgaaa atgggcagcg ttttcgcgag gcgatccttt
     5281 ccagaggtaa cagcgaagat ctggaacgcc tgtatcgaca atggcgcggt aaggctcctc
     5341 agattatgcc gatgctgcaa catcgtggct tgaatatata aacaccacca atggctggcc
     5401 tggagatatc gccaggccag cctggttata gcagtaattg cagcagctgg acgtgggcaa
     5461 acctcaccgc taaagctaat accgtttcgc agtcgccagc aaaatgcata accgcagtgt
     5521 aggtctggcc tttaatatgc cacgcgaacc agacggtacc cgctggcgta ccatcttcac
     5581 cgccctccag tccgccgtag ccggtaatgg caatactgac atcagcatcc gcacgctcta
     5641 tggcacctgt tgccatttct gctgccactt tctcactcac cgcagaatat cgttcaagag
     5701 attgctggct tacgctgagg attttcatct ttgcctgatc ggtgaaagta acaaagcctg
     5761 caccgtaaaa tttgggtgta tcttcagctg cacacagggc gctagccaac ttaccgccgg
     5821 tgcatgattc ggcggtagtt aagcgtaatt gatccgcgat aagtctttga ctcaacgcgg
     5881 atgtcaggtt tt
//
LOCUS       DADKRT010000220         5813 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.224, whole genome shotgun sequence.
ACCESSION   DADKRT010000220 DADKRT010000000
VERSION     DADKRT010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5813
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.224"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..853
                     /gene="pdeC"
                     /locus_tag="JQ356_003822"
     CDS             <1..853
                     /gene="pdeC"
                     /locus_tag="JQ356_003822"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY4623762.1"
                     /translation="ALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQ
                     PIIDIKTEKCIGAEALLRWPSEQEQVMNPAEFIPLAEKEGMIEQVTNYVIDNVFRDLG
                     DYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVEKM
                     TPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAE
                     HIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPA
                     RELTRGQ"
     gene            complement(856..1179)
                     /gene="soxS"
                     /locus_tag="JQ356_003823"
     CDS             complement(856..1179)
                     /gene="soxS"
                     /locus_tag="JQ356_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HAY4623763.1"
                     /translation="MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD
                     YRHRL"
     gene            1265..1729
                     /gene="soxR"
                     /locus_tag="JQ356_003824"
     CDS             1265..1729
                     /gene="soxR"
                     /locus_tag="JQ356_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HAY4623764.1"
                     /translation="MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYRRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN"
     gene            2275..3624
                     /locus_tag="JQ356_003825"
     CDS             2275..3624
                     /locus_tag="JQ356_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY4623765.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGL
                     IFDPNVHFSGVFGMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI"
     gene            3776..5425
                     /locus_tag="JQ356_003826"
     CDS             3776..5425
                     /locus_tag="JQ356_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HAY4623766.1"
                     /translation="MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGF
                     LIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGW
                     LWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFP
                     ARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ"
     gene            complement(5579..>5813)
                     /locus_tag="JQ356_003827"
     CDS             complement(5579..>5813)
                     /locus_tag="JQ356_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HAY4623767.1"
                     /translation="MFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFF
                     EEDCTSHTGMSQTEDNINAVAMKITADIMQHAD"
BASE COUNT         1259 a         1376 c         1602 g         1576 t
ORIGIN      
        1 tgcgttgccc gccggtattt tggggagtct tgttctgcta ttactctggc tacgtattcg
       61 acaaaactat ttgtctccca aacgcaaatt gcaacgcgct ctagaaaaac atcaactttg
      121 tctttattac cagccaataa tcgatatcaa aacagaaaaa tgtatcggcg ctgaagcgtt
      181 gttacgttgg cctagtgagc aggagcaagt aatgaatccg gcagagttta ttccgctggc
      241 agaaaaggag gggatgatag aacaggtaac taattatgtt attgataatg tcttccgcga
      301 tctgggcgat tacctggcaa cacatgcaga tcgctatgtt tctattaacc tgtcggcctc
      361 cgattttcat acgtcacggt tgatagcgcg aatcaatcag aaaacagagc aatacgcggt
      421 gcgtccgcag caaattaaat ttgaagtgac tgagcatgca tttcttgatg tcgaaaaaat
      481 gacgccgatt attctggctt tccgccaggc tggttacgaa gtggcaattg atgattttgg
      541 tattggctac tctaacttgc ataaccttaa atcattgaat gtcgatattt tgaaaatcga
      601 taaatcgttt gttgaaacgc tgaccaccca caaaaccagt catttgattg cggaacacat
      661 catcgagctg gcgcacagcc tggggttaaa aacgatcgct gaaggcgtcg aaactgagga
      721 gcaggttaac tggctgcgca aacgcggcgt gcgctattgc cagggatggt tttttgcgaa
      781 ggcgatgccg ccgcaggtgt ttatgcaatg gatggagcaa ttacccgcgc gggagttaac
      841 gcgcgggcaa taaaactaca ggcggtggcg ataatcgctg ggagtgcgat caaactgccg
      901 acggaaaacg cgggagaagg tctgctgcga gacataaccc aggtccattg cgatatcaaa
      961 aatcggacgc tcggtggtgc gcaactcaac ggcggccagt aacaggcgac gttggcgaat
     1021 gtaatcgcca agcgtctgat gcgtcaccgt gcggaacatt cgttgcaagt accactttga
     1081 atagcctgat ttttttgcga ctacatcaat gttaagcggc tggtcaatat gctcgtcaat
     1141 ccatgcgata agatcctgaa taattttctg atgggacata aatctgcctc ttttcagtgt
     1201 tcagttcgtt aattcatctg ttggggagta taattcctca agttaacttg aggtaaagcg
     1261 atttatggaa aagaaattac cccgcattaa agcgctgcta acccccggcg aagtggcgaa
     1321 acgcagcggt gtggcggtat cggcgctgca tttctatgaa agtaaagggt tgattaccag
     1381 tatccgtaac agcggcaatc agcggcgata tagacgtgat gtgttgcgat atgttgcaat
     1441 tatcaaaatt gctcagcgta ttggcattcc gctggcgacc attggtgaag cgtttggcgt
     1501 gttgccagaa gggcatacgt taagtgcgaa agagtggaaa cagctttcgt cccaatggcg
     1561 agaagagttg gatcggcgca ttcatacctt agtggcgctg cgtgacgaac tggacggatg
     1621 tattggttgt ggctgccttt cgcgcagtga ttgcccgttg cgtaacccgg gcgaccgctt
     1681 aggagaagaa ggtaccggcg cacgcttgct ggaagatgaa caaaactaaa gcgccacaag
     1741 ggcgctttag tttgttttcc ggtctttgtc tttctctcta tcccgctggt acacaggagg
     1801 gtttcccccg acgtcaacac acctcattcg agcacgtggt ggaggttccg gttggtgttg
     1861 atgctttaat tgtatgtcac cgacgtttct tcgccagtgt aaaagtatac tttttaaccg
     1921 caatattttt gtcatctcag acgatttttt atcgcaatcc tgaacggtat acggctcgat
     1981 aacgctgcaa tcttgcgcac cgacgataac gtttgcgcat caattgcctg ttttttcatc
     2041 gtcaagacaa taaaagagaa aaaagcagca aacttcggtt gaaaaagccg ctatgatcgc
     2101 cggataatcg tttgcttttt ttaccacccg ttttgtatgc gcggagctaa acgtttgctt
     2161 ttttgcgacg cagtaaattg tcgcaaacct ggagcaggaa gataacgttt cgctggcagg
     2221 ggattgtccg ccacgcatct tgacgaaaat taaactctca ggggatgttt tcttatgtct
     2281 acgccatcag cgcgtaccgg cggttcactc gacgcctggt ttaaaatttc acaacgtgga
     2341 agcactgtcc gtcaggaagt ggttgccggg ttaacaacgt ttctggcgat ggtctactcg
     2401 gtcatcgtcg ttccaggtat gttgggtaaa gcaggcttcc cgcctgcggc agttttcgtt
     2461 gcaacctgtc tggttgccgg actcggttct atcgtgatgg gtctgtgggc taatctgccg
     2521 ttggcgattg gttgcgccat ctccctgacg gcgtttaccg cattcagcct ggtgctgggg
     2581 caacatatta gcgtacctgt cgcgctgggt gccgtgttcc tgatgggtgt gctgtttacg
     2641 gtaatttctg ccacgggtat ccgtagctgg attttgcgca acttgccgca cggtgtggcg
     2701 cacggcacgg ggatcggtat cggtctgttc ctgctgctca ttgccgctaa tggtgttggt
     2761 ctggtgatta aaaacccgct tgatggtctg cccgttgcgc tgggtgattt cgcgaccttc
     2821 ccggtgatta tgtcactggt aggtctggcg gtgatcatcg gcctggaaaa actgaaagtc
     2881 cctggtggca ttctgctgac cattatcggt atctcaattg tcggtttgat cttcgatcct
     2941 aacgtccatt tctccggcgt tttcggcatg ccttcattga gcgatgaaaa cggcaattca
     3001 ctgattggca gcctggacat tatgggcgcg ctgaatcctg tagtcctgcc aagcgttctg
     3061 gcgctggtga tgacggcagt atttgatgcc accggaacta tccgtgccgt cgccggccag
     3121 gcgaacctgc tggataaaga tgggcagatc atcgacggtg ggaaagcact gaccactgac
     3181 tccatgagca gcgttttctc tggcctggtg ggtgctgctc cggcagcggt atacatcgag
     3241 tctgcggcgg gtacggcggc gggcggtaaa accggtttga cggctatcac cgttggcgtg
     3301 ctgttcctgc tgattctgtt cctctctccg ctctcttacc tcgttccggg gtatgcaacg
     3361 gctccggcgc tgatgtacgt tggcctgctg atgctgagca acgtggcgaa aatcgacttt
     3421 gctgattttg ttgatgcgat ggcgggtctg gttacggcgg tattcatcgt gctgacctgt
     3481 aacatcgtaa caggcatcat gatcggcttc gcgactctgg tgattggtcg tctggtttcc
     3541 ggcgaatggc gcaagttgaa catcggtacg gtcgttatcg ccgtggcgct ggtgaccttc
     3601 tatgcgggtg gctgggctat ctaatctttc atcggattct gaaaacgggt ggcaatggct
     3661 gcccgttttt attttctccg cacattgtgt gagcttttgc gatattctga aaaaatgaga
     3721 attcaggcat aacgcctttc tcagatcata aaaaaacatc gcaaacaggg aacgcatgga
     3781 aatcttcttc accatactga taatgaccct cgtggtctcg ctgtccgggg tggtcactcg
     3841 tgtcatgccc tttcagatcc cgcttccgct tatgcaaatc gccatcggtg cgctactggc
     3901 gtggccgacg tttggtttgc atgtggagtt tgatcctgaa ctctttttag tcttgtttat
     3961 cccgccgttg ctgttcgctg atggctggaa aacgccgacc cgtgaatttc tcgaacatgg
     4021 tcgagagatt ttcggcctcg cgctggcgct ggtggtggtc accgtggtcg gcattggctt
     4081 ccttatttac tgggtggtgc cgggcattcc gctgatcccc gcctttgcgc tggcggcggt
     4141 actttctccg accgatgctg tggcgctctc cggaattgtt ggcgaagggc gcatcccgaa
     4201 aaaaatcatg ggcattttgc agggcgaagc gttgatgaat gacgcctccg gcctggtgtc
     4261 gttgaagttt gccgtggcag tggcgatggg gacgatgatc ttcaccgtcg gcggtgcgac
     4321 ggtcgaattt atgaaagtag ccattggtgg tattcttgcc ggttttgtgg tgagctggct
     4381 gtatggtcgc tcgctgcgat tcctcagccg ctggggcggt gatgaacccg cgacgcagat
     4441 cgttctgctg ttcttgctgc cattcgcttc ttatctgatt gccgaacata ttggcgtttc
     4501 cggcatcctc gctgcggttg ccgccgggat gaccatcacc cgctccggtg tgatgcgccg
     4561 tgcgccgctg gcaatgcgcc tgcgcgcaaa cagcacctgg gcgatgctgg aatttgtctt
     4621 taacggcatg gtgttcctgc tgttaggtct gcagctgccg ggtattctgg agacgtcgct
     4681 gatggcggca gaaatcgacc ctaacgtcga aatctggatg ctgtttaccg atattattct
     4741 gatatatgcg gcgctgatgc tggtccgttt cggctggctg tggacgatga aaaagttcag
     4801 caaccgcttc ctgaagaaga agccgatgga gtttggttcg tggaccacac gagaaatcct
     4861 gatcgcgtct ttcgccgggg tgcgtggggc gatcactctg gccggtgtgc tctctatccc
     4921 gctgctcttg ccggatggta acgtcttccc ggcgcgctat gagctggtgt tcctggcggc
     4981 tggcgtcatt ctcttctcgc tgtttgtcgg tgtggtgatg ttgcctattc tgctacaaca
     5041 cattgaagtc gcggatcatt cgcaacaatt gaaagaggaa cgtattgcgc gagcggcaac
     5101 ggcagaagtg gcgattgtgg cgatccagaa aatggaggag cgtctggcgg cggataccga
     5161 agagaatatc gataaccagc tgcttacgga ggtcagttct cgcgtcattg gtaacctgcg
     5221 tcgtcgcgcc gatggacgta acgacgttga aagttccgtg caggaagaga accttgagcg
     5281 tcgcttccgt ctggcggcat tgcgttctga acgtgctgaa ctgtaccacc tgcgcgccac
     5341 gcgggagatc agcaacgaaa cgctgcaaaa attactgcac gatctcgatt tgcttgaagc
     5401 gttgctaatt gaggaaaatc agtaagccga aagcgacgta accaggcccg aggtaatctg
     5461 aaaaaggtgc aatcttttgc acctttaaca ggttagctcg ggctaacatt catgattcta
     5521 aaacaaataa gttatctctc ttgtaaagtc aattcattgg ctgttcttcg acttaacctc
     5581 aatctgcgtg ttgcataata tctgcagtaa tcttcatagc gactgcatta atattatcct
     5641 cagtttgtga catgccagta tgagaggtac aatcttcttc aaagaatttc tgtagtgtta
     5701 ccagggtatc actatcaatg gggatatttt cctctccacg gagtatggaa atgcccattc
     5761 cctggacgct agcctcatca aaattaaccc gatagagacg ggtattaaac ata
//
LOCUS       DADKRT010000221         5739 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.225, whole genome shotgun sequence.
ACCESSION   DADKRT010000221 DADKRT010000000
VERSION     DADKRT010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5739
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.225"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..392)
                     /locus_tag="JQ356_003828"
                     /pseudo
     CDS             complement(1..392)
                     /locus_tag="JQ356_003828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151035092.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
     gene            complement(578..3886)
                     /gene="icsA"
                     /locus_tag="JQ356_003829"
                     /gene_synonym="virG"
     CDS             complement(578..3886)
                     /gene="icsA"
                     /locus_tag="JQ356_003829"
                     /gene_synonym="virG"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane autotransporter IcsA"
                     /protein_id="HAY4623768.1"
                     /translation="MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLL
                     LGGPIAFAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSHAS
                     RTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGMILGGSGGSGA
                     DHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGDAVTGVNLPIINKGTIS
                     GGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDN
                     LSIINNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNN
                     SLILHEGSVITGDVQVNNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVS
                     GDVSFGENSSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
                     VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKENAELTVST
                     ILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNINAGILKMGTVEAMTRTA
                     GVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVIL
                     NNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEITGHASGITYVAVTNEG
                     GSGDKTLEGVQIISTDSSDKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMD
                     NQESKQMSNQESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSP
                     SLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQIGGDILK
                     TNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKERTGL
                     YMDAWLQYGWFNNTVKGDGLTGEKYSSKGITGALEAGYIYPTIRWTTHNNIDNALYLN
                     PQVQITRHGVKANDYIEHNGTMVTSSGVNNIQAKLGLRTSLISHSCIDKETLRKFEPF
                     LEVNWKWSSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNS
                     YRDTQGILGVKYTF"
     gene            4415..5617
                     /gene="virA"
                     /locus_tag="JQ356_003830"
     CDS             4415..5617
                     /gene="virA"
                     /locus_tag="JQ356_003830"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858314.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-tubulin-specific protease"
                     /protein_id="HAY4623769.1"
                     /translation="MQTSNITNHERNDSSWMSTVKSTTEVSWNKLSFCDVLLKIITFG
                     IYSPHETLAEKYSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYL
                     DGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAIN
                     CCTSIIPNDDYFPVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINE
                     LGINEFIDSKKELQMLSYNQLNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTS
                     AFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVVPKNDTAI
                     SASGGRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVS
                     FAIISPDV"
BASE COUNT         1776 a         1295 c          948 g         1720 t
ORIGIN      
        1 caggctgtac gcttccccat gtgatttgcc tcgccacttc accgggctca ggaccccgta
       61 ggatcttcac cgaaaaaaat gcatcaccag ttgctttatt atttgtttta ggtagacctg
      121 ttactaattt atacctactc tgaccaagtc tggataagaa aggcacacct gcacatttct
      181 acttggaaat gttttctttt accattttgc tcaaaaattt caacatccaa tattcctcgt
      241 acagaactac tcaagtcctg aatagaaaaa gttccagctg gtacagtaga gtcatatatt
      301 gctcgacctt gttgagatac aacaacacgt gcattagttt ctgcaatacc agtaatctga
      361 ggcgcataac cacgaatatt tggcggtagc attcgttcat cgctttctaa tgcaattcct
      421 gtgtaacgcc aagcaacagc gcattctggc gcatgatctg gtaaacacgt ttggcattga
      481 tcgcaggcat accatcatgt gcacaaaaac ccaccgagct tttacacggt gggtcccaga
      541 gaaatgcagg acatcaacac gccctgcatt tttattatca gaaggtatat ttcacaccca
      601 aaataccttg ggtgtctctg taactgttat tacccaattg ctgagatacg tttccccaga
      661 tgcttaggtt atctgcaaga cgccccccca caccagtttt gagttcaatc acattacggt
      721 tgcctatctg gtgatttgac atgccattca taattacacc atattgcttt gagctccatt
      781 tccaattcac ttccaaaaat ggttcgaact tacgaagagt ctccttatcg atacaactat
      841 gactaattaa ggatgtacgc aatcccaatt ttgcttgaat attattgacc ccagaggatg
      901 tgaccatagt gccattgtgt tcaatatagt cgtttgcttt taccccatgc ctagttatct
      961 ggacttgtgg attgagatac aatgcgttgt caatattatt atgagtagtc cagcgtatgg
     1021 ttgggtagat atagccagct tccaaagctc ctgttattcc tttgctggaa tatttctcac
     1081 cagttaaccc atctcctttg actgtattat taaaccaacc gtactgcaac caagcatcca
     1141 tatatagacc tgttcgttct ttttcatcct gaaaccaaga actgtacaaa ccggcagtat
     1201 aaccgctcac agttcctcgt gaactataac tagtatactt attatgagtt ttgctatcct
     1261 gatatccata agctcccata atacccacat gcaagccatc atgatcagtg aagtttgtct
     1321 tcaaaatatc tccaccaatc tgataaacca tcctgttagc tgtggttttt aattgtctat
     1381 cagctaaatt atgctcatta tgtccaccaa cagtacgaat ccacatggtg gtttcgctga
     1441 gctgacctgt agtaggatca acaatagtgc taccgtgtcg gtcatagaga gaaggactaa
     1501 acatcgtgtt cattgctatc aggttagcaa tataactgcc agcttcaggg cgccatgtgt
     1561 gaatactacc ttcacccaaa ttaagtgaag atacaagctg tgaactagct cggcgactac
     1621 tcatttgagt agactcttga ttgctcatct gttttgattc ttgattatcc atctgactag
     1681 ttagatacca cttattggta ttcagtccag atacagtgcc ctgtttcagg cgatagtcat
     1741 aactaccagc aacaatacgg cctttctgaa taaaagcatt cttatcagaa gaatctgtcg
     1801 aaataatttg aacaccttca agagttttat ctccagagcc tccctcattt gtcactgcaa
     1861 cataggtaat accagacgca tggcctgtaa tttccagccg gtcagtttta ctgttgtcat
     1921 tgccgagaac cgcgcccaaa gataatattc cgccctttcc atgccaatta cctttctgaa
     1981 cataggtctg accgacattt gacgaactat tattgagaat aacatgaccg tttttctcca
     2041 gagtcatgtt acctgtgaca atgacggggt caggcaaaaa aggggcatta atattattga
     2101 ttagcacagt cccactattt aataaagtgt taacagtttg gttcatgcct gaaaaattca
     2161 aggtagcacc tttattaaca ataacaccag cggtacgtgt catagcttca actgtcccca
     2221 tttttagaat gcctgcattg atgttggtga aaccagagta ggtatttttt tccgccaaaa
     2281 tgagagttcc ctcccctgat tttgttaggg attttccgtc ccagctattt atattatgat
     2341 ggctgagatt atctgccaga atagtactaa cagtaagttc agcgttttct ttcagattga
     2401 actctccatg actgtcgcca tctgtatcat tccagctcaa accgtagatc aatttattct
     2461 ggtcactgat atagcttttt gtatagtcaa tagcaccagt agtgagtaac ggattgatga
     2521 tagatatatt agaaacactg aaacctgtta tccctttatc tgcacttagc agtttatagt
     2581 ccttctgcgc ccagttattt ataatagctt ccacttttac attgttgcca aatgacatat
     2641 ttccagaagc ttccagacta ctgattccag ctaaatttaa agaactgttc tcaccaaaag
     2701 aaacgtcacc tgaaacagtg aatttgttac ctgatagtga aacagttgta caatcaccag
     2761 cacataaatc accttcaata gttggtgtgg tcccagtgta atcattgttg ataattttca
     2821 gaatggatga attgttaacc tgtacatcac cagtaatgac agaaccttca tggagtatta
     2881 atgaattgtt tccaccagtg atgtggatag cattacctgc tacattttgt gttccatcat
     2941 cttctttacc tgaaattata tatccgctat tagcaatggt catattgcta ccatttatag
     3001 catcccccca atgtccacca ttaccgccta aaatagctcc attgttgatt atagacaggt
     3061 tatctcctgt gatagcatta ccaccgtagc catcataacc ataaccgtaa gcagcacctc
     3121 cgttgcctcc agcgaacgtg cccttattga ttacagagag gctgcttcct gtgatggcat
     3181 cacctccatt accgccatca ccctcaccat aattgttacc tccattacca ccggaaatag
     3241 tccctttgtt gattatgggt agattgactc ctgtgacggc atcacctcca ttccccccat
     3301 cactatcact ataactatcg ccaccatgtc cacctgaaat aatttctcca tttattataa
     3361 acagattgtc tcctgtaaca gcctcaccac catcaccgtt atggtcagca ccgctaccgc
     3421 cgctaccacc aagaatcatg ccttgattga ttatagacaa gtcagatccg gtaatagagt
     3481 caccaccatt accgccacaa ctattaccat cattattatc accagcacca ccatgacctg
     3541 cgctaatcat aatatcagag ttaatccgta gcttagttct agatgcatga gaggggttgg
     3601 aagaagttat ataccacgca tccattccat cttcaccagc tcccaaggga gaaagtccat
     3661 caacaggtgt taataatttt tcataattgt cctctgaaaa atgaagttct tgagtacccg
     3721 aaagaggaat agcaaaagct attggccccc cgagcaacag ggatgcacca acaacaaaag
     3781 gagaaaaaga caatttgcat gttttttcct ttaccgtagg taattctccg gcccccccct
     3841 gtgaacattg ggtcatatta caaaaaaatt tgtgaatttg attcatgcac tatattatca
     3901 gtaagtggtt gataaacccc taaaaagatt ccgttttatc cggaataaag ggacgatata
     3961 tgcaaaaaca tattaaacaa agcctcaacc aaaacatgag agctgtgtta tatatcaatg
     4021 caacgggaga aatttacctg tgtcttgctt tgaaaaaaag agggggaaag ctatatgttc
     4081 gataataaat taataatttt actatgatag tctgcttcag accgcaactt ttcagttctt
     4141 tctgtacgct tgcccaaagt ttaaccactt tgtttttcta tacacccaat ggttctatct
     4201 gccccttgat gttaatcccc aaagccaata acatgaatgt attcatatca caactttcct
     4261 accagactct ccaatgcaat aactgcataa ttgtttttag tggaaatgta tcgttttctt
     4321 aaagagaaga ataacattcc attttattat gttcccaatt taattatatt aatatatatt
     4381 ggcatcaata ggaaaataca tcaggagaaa tcaaatgcag acatcaaaca taactaacca
     4441 tgaaagaaat gactcatcat ggatgtcaac tgtcaaatca actacagaag taagttggaa
     4501 taaattgagt ttttgtgacg ttttactgaa aataataact ttcggaatat attctccaca
     4561 cgaaactcta gccgaaaaat atagcgaaaa aaaactaatg gatagtttct caccatcact
     4621 atcacaagat aaaatggacg gagagtttgc ccacgcaaac atagatggca tttcaatacg
     4681 gctatgcctt aacaaaggca tatgttcggt tttttatctt gatggagata aaatacaatc
     4741 cactcaactt tcatcaaaag aatataataa cttgttaagt tcactccccc ccaaacaatt
     4801 caacttagga aaagtacata ctattacagc tccggtatca gggaatttta aaactcacaa
     4861 gcctgcacca gaagttattg aaacagccat taattgctgt acatcgataa taccaaacga
     4921 tgattacttt cccgttaaag acactgattt taatagtgtt tggcatgata tttacagaga
     4981 tattcgagca tctgacagca atagtacaaa aatatatttc aacaatattg aaataccact
     5041 aaaattaatt gcagatctaa ttaatgagtt aggaattaat gaattcattg atagcaaaaa
     5101 agagcttcaa atgctaagtt acaaccaatt aaataaaata atcaattcaa acttccccca
     5161 acaagaccta tgttttcaaa cagaaaaact tttgtttact tcactctttc aagaccctgc
     5221 atttatatcc gcactaacat ctgcattctg gcaatctctt cacatcacgt cttcctctgt
     5281 ggaacacata tatgcccaaa ttatgtccga aaacatagaa aacaggctta atttcatgcc
     5341 tgaacaacga gttattaaca attgtggaca tattataaaa atcaacgcag ttgtccctaa
     5401 aaacgacact gcaatctctg cctctggggg gagggcttac gaagttagct catcaatatt
     5461 accatcgcac ataacatgta atggtgttgg tattaataaa atagaaacaa gctatctcgt
     5521 tcatgctgga acacttccaa gcagtgaagg gcttcgcaat gctatccctc cagaaagtcg
     5581 tcaagtatca tttgccatca tatctcctga tgtttaagcc aatattatat tggctgccag
     5641 actgtaaaaa aacgttcttc agaacagctc tataaactat taaaccaaag ctaaaaggat
     5701 ggggaccaat agaatctcag cccatccttt ttatatcat
//
LOCUS       DADKRT010000222         5682 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.226, whole genome shotgun sequence.
ACCESSION   DADKRT010000222 DADKRT010000000
VERSION     DADKRT010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5682
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.226"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(26..1954)
                     /gene="dhaR"
                     /locus_tag="JQ356_003831"
     CDS             complement(26..1954)
                     /gene="dhaR"
                     /locus_tag="JQ356_003831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase operon
                     transcriptional regulator DhaR"
                     /protein_id="HAY4623770.1"
                     /translation="MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWSVPHQAQGV
                     TFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSA
                     LGFHDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRL
                     TGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDG
                     VISWDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEA
                     TFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDD
                     PQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGD
                     AALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITR
                     LDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPAL
                     VNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSD
                     LPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTL
                     WRKMKQHGIDAGQFKRRV"
     gene            2173..3282
                     /gene="dhaK"
                     /locus_tag="JQ356_003832"
     CDS             2173..3282
                     /gene="dhaK"
                     /locus_tag="JQ356_003832"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HAY4623771.1"
                     /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG
                     KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLI
                     IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV
                     GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH
                     GEPGIDRRSFSSLDQTVDEMFDTLLGNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD
                     RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK
                     VDDETLALWDAPVHTPALNWDKLGESNVTEQNSNC"
     gene            3254..3886
                     /gene="dhaL"
                     /locus_tag="JQ356_003833"
     CDS             3254..3886
                     /gene="dhaL"
                     /locus_tag="JQ356_003833"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HAY4623772.1"
                     /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR
                     GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
                     LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS
                     IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
     gene            3897..5315
                     /gene="dhaM"
                     /locus_tag="JQ356_003834"
     CDS             3897..5315
                     /gene="dhaM"
                     /locus_tag="JQ356_003834"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaM"
                     /protein_id="HAY4623773.1"
                     /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
                     IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVE
                     GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV
                     VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
                     AKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTL
                     TVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDYIAAIFSGHHTLLDDPELLAAASEL
                     LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
                     FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
                     YAIQPEETLTLDVKTQRFNRQG"
BASE COUNT         1425 a         1455 c         1399 g         1403 t
ORIGIN      
        1 atgtattaga aatcgtttct gtctttcata cccggcgctt aaactgccct gcatcaatgc
       61 catgttgctt cattttccgc cacagcgtag tgcggccgat tccaagtaaa gccgacattt
      121 cctgaatgcg accgcctgtg acctgggctg cgttaataat tgcctctttt tcaacttccg
      181 caaatgacag actggtggaa aggcgggtgg cgctgacatc atctgttgcc tgctcggtaa
      241 acagatgttc cggcaaatca ctgacgcgaa tgcgcccatt atcactactc agagcaagat
      301 tctcgatgac gctgtaaagt tcaaaatcgt tgcctggcca tgcacaagaa accaggcgag
      361 cgagggcatc gtcatcaatt ttcagccgcg tagagaagcg tttttcaaga ctgcgtaatt
      421 tgttattcac cagcgccgga atgctgccac gccgcatacg cagaggcggg atggtaattt
      481 caaatgcatg cagcgcgtaa tacagctggc gactaaaacg attttgttcc accagcattg
      541 cgaggtccgc ggtcgttgtt gcaatcactt tgacatcaat tggtattaaa cgccgcgcat
      601 ccagtcgcgt gataacaccc tgcttgataa cctgaagcaa agcagactgt aactccaccg
      661 ccagatattc aatcttttca agaaacagcg tgccgccgtg cgccagttcc agccgactca
      721 gacggccatt ttcattgtcc gtacgatcac caccaataaa ttcttccgcc agtgccgcat
      781 caccatataa ctcacaattg acggcgatat aaggacctgc agcacgctcg ctttcattat
      841 gaattgcctg acttagcagt gccttgccca cgccctcttc tccacaaagc aggacaggaa
      901 agctactgcg cgccgcctgg cgaccaaaat gaatcaagcg gcgggtttgc ggatcgtcct
      961 gtggcatatg agcaaaggta tggctgactt ttcctaattg actggtcatc aactgccgca
     1021 tctgttccac aggatggagc aacaaaataa agctggttcc ctgcgtttct attatcggtt
     1081 taagggttat caccgcatca ataaactgat gctgactttc aaaggttgct tctacgtgtt
     1141 tgagcggatg tgcctgtttt attgcttgtt gcaatacggc gggtaacgtt aagagttcag
     1201 tgattgcccg tccctgactt gccgtcgcgt caaggcgcaa gacccgcgcc gcctgggcat
     1261 tgataaattg caaattaccc tgctcgtccc agctaatcac gccatcatcc atactttcta
     1321 acagggcatt aagttgattt aaatgacggt tagtttcagc gagcaaactg tccgtcagca
     1381 gtaaatttcc gacctcgcgg gcgattgcca acgtcaacgg caaatcagct gcggtagttt
     1441 gctcaaccgg acacgccagc gctattgttc ccgtcaatcg gcccttgctg tcaaacaacg
     1501 gcgttgcaca aaaggcccag ttccagagtg cctgtttgaa atgttgatcg gccatcgttt
     1561 tcacggcctg accagagata gccgctaacg atagcgcaca agtaccaata attccctcgg
     1621 cgcaatacgt gccgtcatgg aatccaagtg cacttagctg ctgcaaggtt tgcggatcgc
     1681 cattacggct gagaatgcag gcggtttcat cgaggataaa cagcgcacac tctcgcggtg
     1741 ccatatattc ccaggcatct tccagcgcag cctgcccgag cgtcagcatc gctttcttac
     1801 gccgataaat agaagcaaat gtcacgccct gggcctgatg tggtacgctc catgtctccc
     1861 gtttcatcag cttattgcat cgctcccagg aggttgcaat taagggagat atgccccgac
     1921 catcgttgtt aaaagcgcca ctcatatccc gcatccctta tgacaaaagg tgttccggct
     1981 cgcaatttta agtattaata cacgtaaaag tttcaatatg gaacattcat taaagcatat
     2041 gtttcactat gaaacataat ttgggctaat tttcttttcc cttgcctgat gcacaatgga
     2101 ttcatcggca gtcagtggtc gccgtgtcgt tgaacatcat ccatgcccta ccgtaattgc
     2161 tggagcaaaa taatgaaaaa attgatcaat gatgtgcaag acgtactgga cgaacaactg
     2221 gcaggactgg cgaaagcgca tccatcgctg acactgcatc aggatccggt gtatgtcacc
     2281 cgagctgatg cccctgttgc aggaaaagtc gccctgctgt cgggtggcgg cagcggacac
     2341 gagccgatgc actgtgggta tatcggtcag gggatgcttt cgggggcctg tccgggcgaa
     2401 attttcacct caccgacgcc cgataaaatc tttgaatgcg ccatgcaagt tgatggcggc
     2461 gaaggtgtac tgttgattat caaaaattac accggcgata ttcttaactt tgaaacagcg
     2521 accgagttac tgcacgatag cggcgtaaaa gtgaccactg tggtcattga tgacgacgtt
     2581 gcggtaaaag acagtcttta tactgccggg cgacgcggcg ttgccaacac cgtattaatt
     2641 gaaaaactcg taggcgcagc ggcggagcgt ggcgactcac tggacgcctg tgcggaactg
     2701 gggcgtaagt tgaataatca aggccactca ataggtatcg ctctcggtgc ctgtaccgtt
     2761 cctgccgcgg gcaaaccttc ttttaccctg gcggataatg agatggagtt tggcgtcggc
     2821 attcatggtg agccgggtat tgaccgccgc tccttctctt cccttgatca aaccgtcgat
     2881 gaaatgttcg acaccctgct gggaaatggc tcataccatc gcactttacg tttctgggat
     2941 tatcaacaag gcagttggca ggaagaacaa caaaccaaac aaccgctcca gtctggcgat
     3001 cgggtgattg cgctggttaa caatcttggc gcaactccgc tttctgagct gtacggcgtc
     3061 tataaccgcc tgaccacacg ttgccagcaa gcgggattga ctatcgaacg taatttaatt
     3121 ggcgcgtact gtacctcact ggatatgacc ggtttctcaa tcaccttact gaaagttgat
     3181 gacgaaacgc tggcactctg ggacgccccg gtccacaccc cggcccttaa ctgggataaa
     3241 ttaggagaaa gcaatgtcac tgagcagaac tcaaattgtt aactggctca ctcgttgtgg
     3301 cgatattttc agcaccgaga gcgagtatct taccggactg gatcgcgaaa ttggcgacgc
     3361 tgaccacggg ctaaatatga accgaggctt tagcaaagtg gtggaaaaac tccctgctat
     3421 cgcagataaa gatatcggtt tcattctcaa gaataccggt atgacgctgc tttccagcgt
     3481 cggtggtgcc agtggtccgc tgttcggtac cttctttatc cgcgccgcac aggcgaccca
     3541 ggcacggcaa agcctgacac tggaagagct ttatcagatg ttccgcgatg gcgcggacgg
     3601 cgtaatcagt cgcgggaaag ccgaacctgg cgataaaacc atgtgtgatg tgtgggtgcc
     3661 ggtggtggaa tcgttacgtc agtccagcga gcaaaatctc tctgttccgg tggcgctcga
     3721 agctgccagt agcatcgccg aatccgctgc acaaagtacg attacgatgc aagcccgcaa
     3781 aggccgcgcc agttatctcg gtgaacgcag tattggtcac caggatcccg gcgcgacctc
     3841 ggtgatgttt atgatgcaaa tgttggcgtt agccgcaaaa gagtaaggaa ttggtgatgg
     3901 taaacctggt catagtttca catagcagcc gactgggaga aggtgtcggt gaattagccc
     3961 gtcagatgtt aatgagtgat agttgtaaaa tcgccattgc cgcgggaatt gacgatccac
     4021 aaaatcctat tggtaccgat gccgtcaaag tgatggaggc catcgaatct gttgctgatg
     4081 ccgaccatgt gctggtcatg atggatatgg gtagcgcatt attgagtgct gaaactgcgc
     4141 tggaattgct ggctcccaag atcgccgcaa aagtacgttt gtgtgctgcg ccgttggtcg
     4201 aaggtacact ggcagcaacg gtcagcgcgg cctcgggagc ggatatcgac aaagttatct
     4261 ttgacgctat gcatgcgctg gaagccaaac gtgaacaact gggtttaccg tcctccgaca
     4321 ctgaaatctc tgacacatgt cctgcgtacg atgaagaagc ccgttctctg gcggtggtca
     4381 taaaaaaccg taacggcctg catgtacgtc cggcctcccg gctggtttat accttatcga
     4441 catttaatgc cgatatgttg ctggaaaaaa acggcaaatg cgtcacacca gagagtatta
     4501 accagattgc gttactacaa gttcgctata acgatacgct gcgcctgatt gcgaaagggc
     4561 cagaagctga agaggcactg atcgctttcc gtcagctggc tgaagataac tttggtgaaa
     4621 cggaggaagt cgctccacct actctgcgtc ccgttccgcc tgtttcgggt aaagcctttt
     4681 attatcaacc agttttatat acggtacagg caaaatcaac cctgaccgtg gaagaagaac
     4741 aagatcgatt acgccaggct attgacttca cgttattaga tctgatgacg ttaacagcga
     4801 aagcagaagc cagcgggctt gactatattg ccgcaatctt ttctggtcac catacactgt
     4861 tagatgatcc ggaactgctg gcggcggcaa gcgaactcct tcagcatgaa cattgcacgg
     4921 cagaatatgc ctggcagcaa gttcttaaag aacttagcca gcaataccag caactggatg
     4981 atgaatatct acaagctcgc tatattgatg tggacgatct tctgcatcgc accctggtcc
     5041 acctgaccca aacgaaagaa gaactcccgc agtttaactc gccaactatt ctactggcgg
     5101 agaacattta tccttccaca gtactgcaac tggatccggc ggttgtaaaa ggtatctgcc
     5161 ttagcgccgg aagtccggta tcccacagcg ccctaatcgc ccgtgaactg gggattggct
     5221 ggatttgcca gcagggtgag aaactgtatg cgatacaacc agaagaaacg ctaacgctgg
     5281 acgttaaaac gcaacgtttc aaccgtcagg gttaagccac tgttcggatg gcatcgttct
     5341 gatgtcatcc ggcaatttac tcagcactaa tggtttttaa ctacctgtta tatttttcac
     5401 caatttatga tgatttttct tcgctaatca cgaacccaac gccgctggct ggctaataaa
     5461 cagacgttat ttgatcactc tatttcgccg ttatttatcc ctttaattcc cttttctaaa
     5521 atgcctgaca gttcgcagaa tgagatttcg atcatgcagc tagtgcgatc ctgaactaag
     5581 gttttctgat acttgaatac cgttttattc ggtttcgcca aaggagaatg attgatgaaa
     5641 tcccccgcac cttctcgccc gcaaaaaatg gcgttaattc ca
//
LOCUS       DADKRT010000223         5681 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.227, whole genome shotgun sequence.
ACCESSION   DADKRT010000223 DADKRT010000000
VERSION     DADKRT010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5681
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.227"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            30..1415
                     /locus_tag="JQ356_003835"
     CDS             30..1415
                     /locus_tag="JQ356_003835"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000398460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY4623774.1"
                     /translation="MEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNHEA
                     IDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ
                     GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTVFTCYKEKVKYWMTFNEIN
                     NQVNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYELVASALAVQTGKSINPEFN
                     IGCMIAMYPIYPLTCVPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLD
                     ITPEDNAILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQ
                     IDPAGLRYSLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFASHIREMKK
                     AVVEDGVDLIGYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGKGTLERIRKASFYWY
                     RDLIANNGENI"
     gene            complement(1472..1690)
                     /gene="marB"
                     /locus_tag="JQ356_003836"
     CDS             complement(1472..1690)
                     /gene="marB"
                     /locus_tag="JQ356_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HAY4623775.1"
                     /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQ
                     PPFDLNHMGTGSDKSDALGVPYYNQHAM"
     gene            complement(1722..2105)
                     /gene="marA"
                     /locus_tag="JQ356_003837"
     CDS             complement(1722..2105)
                     /gene="marA"
                     /locus_tag="JQ356_003837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707445.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HAY4623776.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRMTNMQGESRFLHPLNHYNS"
     gene            complement(2125..2559)
                     /gene="marR"
                     /locus_tag="JQ356_003838"
     CDS             complement(2125..2559)
                     /gene="marR"
                     /locus_tag="JQ356_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HAY4623777.1"
                     /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK
                     VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT
                     SGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLLKKVLP"
     gene            2771..3436
                     /gene="marC"
                     /locus_tag="JQ356_003839"
     CDS             2771..3436
                     /gene="marC"
                     /locus_tag="JQ356_003839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter MarC"
                     /protein_id="HAY4623778.1"
                     /translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
                     EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
                     PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
                     TYH"
     gene            complement(3461..4651)
                     /gene="ydeA"
                     /locus_tag="JQ356_003840"
     CDS             complement(3461..4651)
                     /gene="ydeA"
                     /locus_tag="JQ356_003840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose MFS transporter"
                     /protein_id="HAY4623779.1"
                     /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH
                     MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT
                     VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV
                     GQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT
                     VVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL
                     VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE
                     EQTQ"
     gene            complement(4801..5508)
                     /gene="yneK"
                     /locus_tag="JQ356_003841"
     CDS             complement(4801..5508)
                     /gene="yneK"
                     /locus_tag="JQ356_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY4623780.1"
                     /translation="MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPL
                     PPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSNSEVHRWFVNKDPNLITAILDIT
                     DGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDFFLFFANMLLHYHQ
                     FMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPV
                     RPPIPATAKTPDLPERH"
     gene            complement(5457..>5681)
                     /gene="yneK"
                     /locus_tag="JQ356_003842"
     CDS             complement(5457..>5681)
                     /gene="yneK"
                     /locus_tag="JQ356_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001598467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY4623781.1"
                     /translation="TLYNEKVQFKLTYPVKNGRHKENIEFQVVINLNPIYLDNFRHDG
                     EINIFALPTQSLSLWGAYFTPASSVCSFCF"
BASE COUNT         1534 a         1255 c         1396 g         1496 t
ORIGIN      
        1 tatggggcgg cgcggtagcc gcgcatcagt tggaaggtgg ctggaatgaa ggaggaaaag
       61 gcatcagtat cgctgatgtg atgactgctg gcgctcacgg ggtgccgcgt gaagtgacag
      121 aaggcgttat cgacgggctt aattatccca atcatgaagc aattgatttt tatcatcgct
      181 ataaaacaga tattcagtta tttgccgaga tgggattcaa atgctttcga acttccattg
      241 cctggacacg aatctttccg caaggtgacg aacaggagcc gaatgaagag ggtttacaat
      301 tttatgatga tctgttcgat gaatgcctta agcagggaat ggaacctgtg gtgacgcttt
      361 cacattttga gatgccttat catctggtga caaaatatgg tggctggcga aaccgtaaac
      421 tgatcgactt ttttatccgc ttcgcatcaa cggtcttcac gtgctataaa gaaaaagtaa
      481 agtactggat gacgtttaac gaaatcaata atcaggtgaa tttcagcgaa agcctgtgtc
      541 catttactaa ttccggtatc ttgtattcgc cagaggaaga tatcaatgag cgcgaacaaa
      601 taatgtacca ggcggtacat tacgagttag ttgccagtgc cctggcggta cagactggaa
      661 aatcgatcaa tcctgaattt aacattggct gtatgatcgc catgtatccc atctatcctc
      721 tgacgtgtgt acccaacgat atgatgatgg ccacgaaagc aatgcatcgt cgttactggt
      781 ttactgatgt tcatgctcgt ggatattatc cgcaacatat gctgaattac tttgccagga
      841 aaggattcaa cctcgatatc acaccagaag ataacgcgat tcttgccagt ggttgtgtcg
      901 actttatcgg ctttagctac tacatgtctt ttacgacaca attttcgccc gataacccgc
      961 aactggatta tgttgaacca cgagatttgg tcagcaaccc ttatatcgat acatccgaat
     1021 ggggatggca aattgatccg gcagggctac gttattcact caactggttc tgggatcatt
     1081 tccagttgcc gctgtttatt gtcgaaaatg gatttggtgc ggttgaccag agacaagctg
     1141 acggcacggt gaacgatcac tatcgcattg attactttgc ttcccatatt cgggaaatga
     1201 aaaaagccgt agttgaagat ggtgttgact taattggcta caccccgtgg ggctgcattg
     1261 acctggtttc tgccggaaca ggggaaatga aaaagcgcta cggaatgatt tatgtcgata
     1321 aagacaacga agggaaggga acgctggaac ggatacgtaa agcgtcgttt tactggtatc
     1381 gggatctcat cgccaacaat ggcgaaaata tttgagactt gaggaagata ttacggagat
     1441 gtcaggctct gtgatcagag cctgacaata actacatagc gtgttgatta taatagggca
     1501 cgccgagcgc atccgactta tcactgccag tacccatgtg atttaaatca aacggtggtt
     1561 gttcctgcga tgggggaaca accacgacat tggcacaaga agtaacaact ggctgcgtgg
     1621 tttgttccgc aacgccctgc gcggaaaaga gaataagcgc agctgctatt gcggatgaaa
     1681 gtggtttcat gattgcctca gtgacgttgt cacgttatca actagctatt gtaatgattt
     1741 aatggatgta aaaagcgcga ttcgccctgc atattggtca tccggtattt atgtggcgga
     1801 acatcaaagt aatttttgaa ggttcgggtc agagtttgtt gcgactcgaa gccatatcgt
     1861 tctgccagat agagtatcgg ctcgttactt tccttcagct tttgcgcgat ttccgtcatc
     1921 ttacggctgc ggatgtattg gcctaatgaa tgaccggttt cttttttaaa catccgttgc
     1981 aggtgccatt tagagtaacc tgaacgctct gacactttct ccagtgacag tggcgattcc
     2041 aggttgtcct cgatccagtc caaaatgcta tgaatggtaa tagcgtcagt attgcgtctg
     2101 gacatcgtca tacctctttt ttgtttacgg caggactttc ttaagcaaat gctcaagtgt
     2161 tgccacttcg tccgccgtca ggttttttgt taattcttga tgcaggtcct ggccaactaa
     2221 ttgatggcat tgttcgcata ttgccgcgcc gctggtggta agttttacca gtacgccgcg
     2281 cttatcattc gggttcggca acctttcaac ccagccttta cagaccaggc gatccagcat
     2341 acgggtcagt gctccaaggt cgacagacaa cacttttttc agttcaaccg gagtaataca
     2401 cgccgcgcag cggatagagc agagcacctt aaactgtgcc gcggtaatat ccagcggaga
     2461 cagatactcg ttaagcagac gatctttctt ctgattaacc atatggatta agcgacccaa
     2521 tggaataatt tcattgaaca gatcgctggt acttttcaca ttagttgccc tggcaagtaa
     2581 ttagttgcag ggggtaatat tacccaggca agtataagtc aaataaatga attgaccgat
     2641 gccacgtttt gctaaatcgg ttcaagtttt ggtcaatgcg atgcaaggtt agctaaagag
     2701 tgacacttta tccttgttta ccccttatac ttttcgctga taatccagat acactggata
     2761 acaaccacca atgttagatt tgtttaaagc aattggcctg gggctggtgg tgttactgcc
     2821 gttagctaac ccattaacaa ctgtcgcgtt atttcttggc ctggcaggca acatgaacag
     2881 tgccgaacgt aatcgtcagt cgttgatggc ctcggtgtac gtatttgcca tcatgatggt
     2941 ggcgtattac gccgggcaac tggtgatgga tacatttggc atttcgattc ccggtctgcg
     3001 aattgcaggc ggcttaatcg tcgcgtttat cggttttcgg atgctctttc cgcaacagaa
     3061 agcgattgat tcaccggagg cgaaaagcaa gtcggaagag ctggaagatg aacccagtgc
     3121 caatattgcc tttgtgccgc tagcaatgcc aagtaccgct ggtccgggaa ccatagcgat
     3181 gattattagc tcggcgtcca cagtgcgtca gagttcaacc ttcgctgatt gggtactgat
     3241 ggttgcgccg ccgctgatct ttttcctggt ggcggttatt ttgtggggaa gcctacgcag
     3301 ctccggcgca attatgcggc tggtgggcaa gggtggcatt gaagcgatct cccgtctgat
     3361 gggattcctg ctggtatgta tgggtgtgca gtttattatt aacggcatcc tggaaatcat
     3421 taaaacgtac cattaaaaaa ggcccgaatg ggcctttcaa ctattgcgtc tgttcttcga
     3481 gtgtcactgg ccagcggcga aatataatga ttgaccatat taacgcggca aaagcaggca
     3541 ccgcgcccac ataaccaatc atcgacattg accagtgcaa actcacctga ttacctacca
     3601 acgcacccgc cccgattcca atattaaata tgccggagaa tagcgccatc gcgacgtcgg
     3661 tagcatctgg tgccagcgcc agcactttaa cctgcatacc aagcccgatg atcatcatcg
     3721 cgatccccca gaaaatactc agcaccccga ggtgtatttc actgttcgcc gcaggtagca
     3781 gcagtgccag acacaccagc aacagcgcaa tcgccgtact caccaacgca gacgcatact
     3841 gattacccag tttaccgaaa atcacgctgc caataatgcc cgcaccaccg agtaataaca
     3901 gtaatgccgt ggcaaagttg gcgctgaatc ccgcaatgtt ttgcacaaaa ggctcgatat
     3961 agctgtatgc cgtgtaatgg gcggtgacaa ccaccacagt taacaaataa atgctcatca
     4021 atgccgggcg gcggaacaat agcgggaggc ttttcaatga accggaatgc tcactgggca
     4081 gtaagggaag taacttaatc aggcacaaaa gggtgataag cgccccaata ccaatcgcga
     4141 agaaggtcat tcgccaaccg aaatactgcc ccacaatgcg cccgagaggt aaacctaaga
     4201 ccatcgccag tgctgtaccg gtggcaatta aactcaaggc ctgtgcccgc ttcccggccg
     4261 gagccatacg gatcgccaga gacgccgtaa tcgaccagaa aatcgcatgt gcaaaagcca
     4321 caccaatgcg actgatcacc agaacggtaa agctccacga taaaaacgac agtacgtggc
     4381 tggcaataaa caccacaaac aggcagatca gtaatttgcg ccgttcaacc tgactggtca
     4441 ttaacataaa aggcaatgac attagcgcta ctacccatgc gtaaatggtc aacatgatgc
     4501 cgacctgagc ggtttgcatg tgaaaacttt gcgcaatgtc agagagcagg ccaacaggga
     4561 caaattcggt ggtgttgaag atgaaggcgg cgactgccag cgtaacgacc cgtagccacg
     4621 ccactttgcg ggaaacagtg tttgttgtca taacagatta tcgggtgagt tgcgaaaaag
     4681 tgatgaaatg atcttaaaac ggttaatgat gtgaatacaa tgcattggtg atctggatcg
     4741 cgttttccgt ttctctgacg ctgattctgt tccgcgtcag agagtcggta acatcacggt
     4801 ttaatgacgt tcagggaggt ctggcgtttt ggcggttgcg ggtataggtg gtctgacagg
     4861 ggagcgaggc ctgtttttca ccaggtcttc gtgagtaact tttggcggcg tttcattttt
     4921 tacaaacagt ttgagggtcc tgcgcgccat atgcttgata attttatcat cacttaatga
     4981 tgctggcatc aacacgtcat tcagatcact ttcattggga ttcataaatt ggtgatagtg
     5041 caataacata ttggcgaaaa ataaaaaaaa gtcctgaaaa tgaggagatt cttgttctgc
     5101 taaaagggat aaaaagcaga tgcagacttc gggtagtaca tgtttgttag aacctaatga
     5161 atccatcagg ctttgcaata aatcctcttt taattcgccg tctgttatgt cgagaatggc
     5221 ggtgatcaag ttaggatctt tattgacgaa ccatctgtga acctcagagt tactccataa
     5281 tcgggggagt atgacaaaat taccgcgaga gataaaattc aggacaagca aatcaaactg
     5341 gcgtaagtaa tctgcagcgg tatggtgatc cggaggcagg ggttcaatat gtggtgtatg
     5401 cgcttttttg atggggacgc caaggtggat cattggaaat tgttcaataa aatcattcag
     5461 aaacagaaag agcacacgct cgacgccggt gtgaaatacg cgccccatag tgacaggctt
     5521 tgggttggga gcgcaaaaat attaatttct ccatcatggc gaaaattatc taaataaata
     5581 gggtttaaat ttattactac ctgaaattca atattttctt tgtgtcttcc attcttgacg
     5641 ggataagtga gtttaaactg aaccttttca ttgtatagtg t
//
LOCUS       DADKRT010000224         5631 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.229, whole genome shotgun sequence.
ACCESSION   DADKRT010000224 DADKRT010000000
VERSION     DADKRT010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5631
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.229"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..353)
                     /locus_tag="JQ356_003843"
     CDS             complement(<1..353)
                     /locus_tag="JQ356_003843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623782.1"
                     /translation="MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGIT
                     LLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEV
                     AHGELSPVTLCDYYG"
     gene            complement(358..1008)
                     /gene="hyfE"
                     /locus_tag="JQ356_003844"
     CDS             complement(358..1008)
                     /gene="hyfE"
                     /locus_tag="JQ356_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HAY4623783.1"
                     /translation="MIGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
                     FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA
                     ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
                     GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
     gene            complement(1020..2127)
                     /locus_tag="JQ356_003845"
                     /pseudo
     CDS             complement(1020..2127)
                     /locus_tag="JQ356_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001442177.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit D"
     gene            complement(2139..2249)
                     /locus_tag="JQ356_003846"
     CDS             complement(2139..2249)
                     /locus_tag="JQ356_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoin racemase"
                     /protein_id="HAY4623784.1"
                     /translation="MENLALTTLMLPFIGALVVSFSPQRRAAEWGFCSPH"
     gene            complement(2266..3213)
                     /gene="hyfC"
                     /locus_tag="JQ356_003847"
     CDS             complement(2266..3213)
                     /gene="hyfC"
                     /locus_tag="JQ356_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfC"
                     /protein_id="HAY4623785.1"
                     /translation="MRQTLCDGYLVIFALAQAVILLLLTPLFTGISRQIRARMHSRRG
                     PGIWQDYREIHKLFKRQEVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG
                     GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA
                     GSTHIEMISNTLATGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE
                     YSGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV
                     LASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL"
     gene            complement(3224..5241)
                     /gene="hyfB"
                     /locus_tag="JQ356_003848"
                     /pseudo
     CDS             complement(3224..5241)
                     /gene="hyfB"
                     /locus_tag="JQ356_003848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311371.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
     gene            complement(5241..>5631)
                     /gene="hyfA"
                     /locus_tag="JQ356_003849"
     CDS             complement(5241..>5631)
                     /gene="hyfA"
                     /locus_tag="JQ356_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HAY4623786.1"
                     /translation="LNESLCIGCKLCAVVCPFGAISASGSRPVNAPAQYVFQADGSLK
                     DGEENAPTQHALLRWEPGVQTVAVKCDLCNFLPEGPACVRACPNQALRLITDDSLQRQ
                     MKEKQRLAASWFANGGEDPLSLTQEQH"
BASE COUNT         1544 a         1588 c         1484 g         1015 t
ORIGIN      
        1 aaaccgtagt aatcgcacag tgtaacgggt gaaagctcgc cgtgtgccac ttcatgacgc
       61 atgtagccaa tcgagtaaac accggtgaga aagccaatca caccaagaat ggcgaggaac
      121 aaaccgccca gaccatcaat atgaagccac agtcccgcag cgaatatttc tcctgcatca
      181 gcggcagttt ggaccaccca gagtgccaga atcagcagca gtgtgatccc taagctatgt
      241 aatacagtca ccgtacaagt cgcagagagc ccccgtttcc ggcaggcaaa acagagcagc
      301 gaaaaaagca gcggcgtgag caggagtaaa gcgaacatca cagaataact catctcatta
      361 tcccttcagc gcggtcaagt tgttcacgtc cagcgtgccg tgggtacgcc atatttttct
      421 tgccagtaac accatcacaa tgacggcgaa gatggcgtcg gtagcgatac ctatttccac
      481 cagttccggt gctcgccagg caagaagcgc cagcaccaga tgggagccgt tttccatcag
      541 gcagtaacca aaaatttgcc gcaggatatt gcgctggctg acaatgcaca gcaggccaag
      601 cagaaaatga cctaacgcta ccgccagcgc cggtttcagc ccggtagcca tcggtagctt
      661 cacgggctga acgacaaatg cgcaaagcag gacaattaac gccgcgagca gtgccatcat
      721 tgccggaccg aataacgctt tttccgggat gttctgggga atatttcgtg cagcgtaagt
      781 catgattaac ggtaccagca gcactttggt gataaaggcg ctggcggacc agatcagcag
      841 ttgctctgcg gcgaacaggc acgagagagt ggcgaaaata gacaccagca ccagcgactg
      901 gcaggcgtaa aatccgcatg acaggcgata gcttttgacg ctaatcacaa acagcgatgt
      961 cagcatcatc agtcccgcca gattatttac gatcatagaa ccgatcattc atcatctcct
     1021 tactgcaacc aggtcgcggc gattacgctg gaaatcagcg acatcacaat cagtacaatc
     1081 aacaccaggc gcattgaccc tggcagcggt gcggcatcgg cgacggcctc gctcggtttg
     1141 ccaggcacaa cgcgaccaaa ccagcgaata aaccaggcga aactggcgac cgattcaatc
     1201 atcagcagaa tcatggcggg cagcaggatc cagtactcca ctgacaacgc aaaaccggcg
     1261 gcaaacagcg ggaatttact gaagaagccg ttgaacggcg gcacaccggt aatcgccagc
     1321 gctgccacgc agaaacccac gcctggcaac ggcagggagt gcaatacgcc acgcagacgc
     1381 ggcaacaagc gcgtgccgca gctgtaactc agcgcacctg ctacaaggaa aaacaggctt
     1441 ttagcgaacg cgtggttgac gatgtaggcg atgctgccct ccagtgccag ccgcccactt
     1501 tcaccatcga tgcggcgtgg agataggctc tgatcggtgt tggcgcttcc attgcgtccg
     1561 gtagccacgc ttgcatcggt agctgggccg atttccccca cgcggcaaac aggatgccgc
     1621 cataaaccag ataacgtgcg tcgccatgta actcgctcat cgcgctaagc acaaacgttc
     1681 cggtctgcaa aaacagcgtg gcggcggcaa gatacaaccc caacgaaccg atatgggtga
     1741 taagcaacgc ttttagtgtt gaacgctgcg ctttatcgct ctggtaataa ctgatcaacg
     1801 cccaggagca gccgccctaa tttcaaaaaa caacaactga ccgagcagcg tcgaggagag
     1861 taccagtccc gccatcgcgc cgataaacac cagcaaaaat gcgtaataac gattcgtgcc
     1921 gttatgcggg tgttcgcgat ttttatccgt cagataaccc gtggagtaga tcgtgaccag
     1981 caaaccgaga aacaccacca caaacagaat cagcgtactc acgcgatcaa tgaccaggcc
     2041 aaacaatgcc acatccccca cgttgaccaa cgtcaacgtg acggcaactt tatcggcctg
     2101 ataaaacgcg gagatcagcg acaacatgca cagcgtggtc agtgcggcga acaaaacccc
     2161 cattcggcgg cccgacgttg tggcgaaaac gaaacgacca gtgcgccgat aaaaggcagc
     2221 attaacgtcg tcagagcaag attttccata ttccgtcagt gctccttaca gaccggttaa
     2281 ccagaagacc catgcaagcg cagcaaggct gaagccaagc caggtcacat ggtgaatgag
     2341 taaaaaacgc ccgcgtgcca gcgtgttttc tgcgattgag gccagtacaa aaatcagcaa
     2401 aaccttgagc agcgtaacga caagtgaagt cagcaggcag gcgagagaaa gttcttgcgc
     2461 gcgcccaaag ggcagaaaca gggccacaaa cagtgctgcc atcacgacct gtttcagccc
     2521 cagcccccat ttcgctagcg ccagcccggc accggaatat tcggtcagcg ggccttcctg
     2581 taattcctgt tctgcttcag caacatcaaa gggaattttt cccatctcaa tgaagcaggc
     2641 aaaaccacag gccagtaacg ccagtacggt ggttagtggc gagttccagc ccgttgccag
     2701 cgtattgctg atcatctcga tatgcgtgga acctgctatc agcgccaata ccagcagtga
     2761 gagaatgagc atgggttcga ccagaatgcc gagcgtcaac tcgcgactgg caccgactcc
     2821 cgcaaacggg cttccggtat ccagtccgga aagagcaaag aaaaaacgaa acagggcaag
     2881 aagatagata agggtgatca gatcgccgcc gcccgcaaaa ggggaaacgg taataaaaag
     2941 tggtagggcc atcgccagca ccagcatgct gctgattaat acccacggca tcaggcggaa
     3001 catcagacct gaagatatag gcgcaacttc ctggcgttta aacagtttgt ggatctcgcg
     3061 ataatcctgc cagatccccg gcccgcggcg ggagtgcata cgcgcgcgta tctgccggga
     3121 aatacccgta aaaagcgggg ttagcagcag cagaatcacg gcctgtgcta acgcaaaaat
     3181 gaccagatat ccgtcgcaaa gagtttgtct catggtgatt tccttagacg gcaatagcga
     3241 ttagcagcac aaccagtgcg gcaactagat acaggcaata gagacgaaag tcgccgcttt
     3301 gcagatgctg tatttctttg gccagccgtt gggtggcgct cacgatgggg cggatcaccc
     3361 gctcatccca gaagggttct gtgctctgag ccctggcggt gacgtgcgca agatctttat
     3421 ttagcctcag cgtagggtcg agctgttgtc gtagacgaaa taacgcagag aagaccacac
     3481 gcagcggctg catcacgcca ttgcctgacg gagccatcgc gttttcccag ccgtagccgc
     3541 atgcccaggc atctcctgtg cgacgaaacg ctgcgcggcg cgaacgacac cacagccagt
     3601 aaaggccagg cagcaaaggc atcgccagta gtaacagcaa cagtaatgaa ggagtgaccc
     3661 gtgtatgaaa cgtgccgggt acaagtgcta ttccgctggc gacagtgacg ggaggggtat
     3721 tggtaaacgc atgggcaata tgcattatct tcggtgccag ccaactggca ctaagcgcaa
     3781 ttaatacgca gagtgccgcg agcagtagca tggcgacgat catcgtattt ggcacttcct
     3841 gtgcctcttc agcgtgtgta ctgcgcggcg caccacagaa agtaataccg tacattttga
     3901 cgaagcacat tactgccagc ccaccagtga ctgccagcat taccatagca ataggacccg
     3961 caagttgtag cgctacggct tccacacgac ttagtgagaa cagcgactgc caggtgtacc
     4021 attcgctgat aaaaccattc agcggaggaa tggctgatat cgcgaggcaa ccaatcaggc
     4081 atgctgcggc tgtccacggc atccgtttcg ccagtgcccc cattttttcc atgtcgtggg
     4141 tatgcaaacg cgaaataatc gcgcccgcgc cgagaaatag cagccctttg aacagcgcat
     4201 ggttgagcag atgaaacagt gcgccgagca gtccaaccac ggtgagcagc gggtcgtgca
     4261 gtgacagacc gtccatcgcc acaccgactg ccagcaaaat aatgccgacg ttttcgacgg
     4321 tactccaggc cagcagccgt ttgatatcct gttccgccag cgcatatagc acgcccagga
     4381 gcgcggagat tgcgccgatc gccatcacca gaatgcccca ccacagaggc aaacccgttt
     4441 gcgccagcag atccatcgct actttcagga tgccgaaaat accgattttg accattacgc
     4501 cagacatcaa cgccgaagcg tgcgatggtg cggcagggtg agcgcgcggc aaccagctgt
     4561 gcaacggcat catcccggct ttcgcgccaa aaccgaaaaa ggccagcaga aacatcgccg
     4621 acgccagccc cggagaaagt gaaagcgtgc gaaactggca aaatcgaggc tgccgctttc
     4681 gcgccccatc agcaagaagg cgatcataat cagcaccgat ccggcgtggg cgataaaaaa
     4741 gtagagcatg ccagcgttga tcgacgtttt atcctgcctg gcaatgacca gaaaccagga
     4801 agacagcgac atcatttcaa acagcacgat gaaccaaaaa gcgttgtcca tcaccagcag
     4861 ggcaaccatc gatgcgatga aaagattcat aaagaagccc atcgccgccg cgcctttgcc
     4921 ctcgtattcg cgcatataag tcaatgaata gagcgaacaa accaccacca gcaaggagat
     4981 aaccagcacc ataaataccg agaggctatc cattcgcagg gttaaatcgg caaagtcaaa
     5041 aggggtggca aaacgggcga ctaaagttac accagcatgt aattgcgtaa ttccgctgat
     5101 gatgccaatc acgccgccca ccagcgatgt gatgccggaa agcttaatag ccagtctgtc
     5161 cagaccgagt aaaaacagcg aagccagact ggcaaacaga aagaggatca gcgaccaggt
     5221 taataattgc agggcatcca ttagtgttgc tcctgagtga gggaaagggg atcctccccg
     5281 ccattggcaa accagcttgc ggcaaggcgc tgtttttctt tcatctgacg ttgcaggcta
     5341 tcgtcggtaa tcagccgtaa cgcctgattc gggcaagcgc gaacgcaggc cggaccttct
     5401 ggcaagaaat tacacaggtc gcatttcacc gcgacggtct ggacacccgg ttcccagcgc
     5461 agcaaagcat gttgggtcgg cgcgttttct tcgccatctt tgagtgagcc gtcagcctga
     5521 aaaacatatt gcgcaggggc attcaccgga cggcttcctg aagcgctgat tgcgccaaat
     5581 gggcagacca cggcgcaaag cttgcagcca atacagaggc tttcgttgag t
//
LOCUS       DADKRT010000225         5583 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.230, whole genome shotgun sequence.
ACCESSION   DADKRT010000225 DADKRT010000000
VERSION     DADKRT010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5583
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.230"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            28..243
                     /locus_tag="JQ356_003850"
     CDS             28..243
                     /locus_tag="JQ356_003850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001384468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY4623787.1"
                     /translation="MSIERFQSLATEGKMLSLSWWENEYAVLQWKNHVLHAKAQQEGR
                     ESIFDFYKISIAHITREYSFKKDKDNV"
     gene            236..622
                     /locus_tag="JQ356_003851"
     CDS             236..622
                     /locus_tag="JQ356_003851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid-binding protein"
                     /protein_id="HAY4623788.1"
                     /translation="MFDVHVVLDNQIGQLALLGKTLGNKGIGLEGGGIFTVGDECHAH
                     FLVEQGKEAKIALEQAGLLVLAIRTPLIRKLKQEKPGELGEIARVLAENNINILVQYS
                     DHANQLILITDNDSMAASVTLPWAIK"
     gene            630..1316
                     /locus_tag="JQ356_003852"
     CDS             630..1316
                     /locus_tag="JQ356_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY4623789.1"
                     /translation="MANLIRKEVTFESSIAAIGAAMSDISRVKILSALMDGRAWTATE
                     LSSVANISASTASSHLSKLLDCQLITVVAQGKHRYFRLAGKDIAELMESMMGISLNHG
                     VHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQYFHEMG
                     IDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTITEKG
                     YAAFKTHFHI"
     gene            complement(1294..1917)
                     /gene="tetR(B)"
                     /locus_tag="JQ356_003853"
     CDS             complement(1294..1917)
                     /gene="tetR(B)"
                     /locus_tag="JQ356_003853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000088607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(B)"
                     /protein_id="HAY4623790.1"
                     /translation="MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
                     VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLG
                     TRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERET
                     PTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS"
     gene            1999..3204
                     /gene="tet(B)"
                     /locus_tag="JQ356_003854"
     CDS             1999..3204
                     /gene="tet(B)"
                     /locus_tag="JQ356_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001089064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(B)"
                     /protein_id="HAY4623791.1"
                     /translation="MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFG
                     VLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRL
                     LSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSP
                     FFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYF
                     SAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKT
                     AVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQGAL
                     QGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQA
                     QGSKQETSA"
     gene            complement(3317..3910)
                     /gene="tetC"
                     /locus_tag="JQ356_003855"
     CDS             complement(3317..3910)
                     /gene="tetC"
                     /locus_tag="JQ356_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracyline resistance-associated
                     transcriptional repressor TetC"
                     /protein_id="HAY4623792.1"
                     /translation="MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKAL
                     VTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIID
                     NNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLN
                     GWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK"
     gene            3998..4408
                     /locus_tag="JQ356_003856"
                     /pseudo
     CDS             3998..4408
                     /locus_tag="JQ356_003856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014656611.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(4424..>5583)
                     /locus_tag="JQ356_003857"
     CDS             complement(4424..>5583)
                     /locus_tag="JQ356_003857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001339197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS4-like element ISVsa5 family transposase"
                     /protein_id="HAY4623793.1"
                     /translation="LHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRI
                     DRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGR
                     SVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGW
                     YWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSR
                     SKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEE
                     TFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQAN
                     TVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALGKL"
BASE COUNT         1542 a         1030 c         1215 g         1796 t
ORIGIN      
        1 ccactattaa gtcatgtagc tggttttatt tcaattgaac gttttcaaag tctagctaca
       61 gaaggaaaaa tgttatcgct atcttggtgg gaaaacgaat acgcagttct gcaatggaaa
      121 aatcatgttt tacatgcgaa agctcaacaa gaagggcgag agtcaatatt tgatttttac
      181 aaaattagta ttgctcatat tactcgcgaa tattcattta aaaaggacaa ggataatgtt
      241 tgatgttcac gttgttttag ataatcaaat aggacaatta gcattactag gaaaaacatt
      301 aggtaataaa ggtattggat tggaaggggg agggatattt acggttggtg atgaatgcca
      361 tgctcatttt cttgttgaac aaggaaagga agctaaaata gcgctagagc aagctggact
      421 gttagtactt gcgatccgga caccattaat tcgtaagtta aaacaggaaa aaccggggga
      481 acttggcgaa atagcacgag tattggcgga gaataacatt aatattttag tgcaatacag
      541 tgaccatgct aaccaactga tattaataac ggacaatgat agtatggctg catctgttac
      601 gctcccttgg gcaataaagt gaacttgcga tggctaattt aatacgaaaa gaggttacct
      661 ttgagtcctc aatagccgcg ataggggcgg ctatgtctga catttcacga gttaaaatac
      721 tcagtgcttt gatggatggg cgagcttgga cggccactga gctaagttct gtggcgaata
      781 tatcagcttc aacggcgagc agtcatttat ctaaattatt agattgccag ctaatcacag
      841 tagtagctca aggcaagcat cgttattttc ggctagcagg aaaagatatt gctgaattga
      901 tggaaagtat gatggggatc tccttaaacc atggcgtaca tgccaaagtt tccacgccag
      961 tgcatttacg aaaagcacgt acttgctatg atcatttagc tggcgaagtt gccgttaaga
     1021 tctatgattc cctttgtcaa cagcaatgga tcactgaaaa tggttcaatg atcacattaa
     1081 gtggtattca atattttcat gaaatgggaa ttgacgttcc ttccaaacat tcacgtaaaa
     1141 tctgttgtgc gtgtttagat tggagtgaac gccgtttcca tttaggtggg tacgttggag
     1201 ccgcattatt ttcgctttat gaatctaaag ggtggttaac tcgacatctt ggttaccgtg
     1261 aagttaccat cacggaaaaa ggttatgctg cttttaagac ccactttcac atttaagttg
     1321 tttttctaat ccgcatatga tcaattcaag gccgaataag aaggctggct ctgcaccttg
     1381 gtgatcaaat aattcgatag cttgtcgtaa taatggcggc atactatcag tagtaggtgt
     1441 ttccctttct tctttagcga cttgatgctc ttgatcttcc aatacgcaac ctaaagtaaa
     1501 atgccccaca gcgctgagtg catataatgc attctctagt gaaaaacctt gttggcataa
     1561 aaaggctaat tgattttcga gagtttcata ctgtttttct gtaggccgtg tacctaaatg
     1621 tacttttgct ccatcgcgat gacttagtaa agcacatcta aaacttttag cgttattacg
     1681 taaaaaatct tgccagcttt ccccttctaa agggcaaaag tgagtatggt gcctatctaa
     1741 catctcaatg gctaaggcgt cgagcaaagc ccgcttattt tttacatgcc aatacaatgt
     1801 aggctgctct acacctagct tctgggcgag tttacgggtt gttaaacctt cgattccgac
     1861 ctcattaagc agctctaatg cgctgttaat cactttactt ttatctaatc tagacatcat
     1921 taattcctaa tttttgttga cactctatca ttgatagagt tattttacca ctccctatca
     1981 gtgatagaga aaagtgaaat gaatagttcg acaaagatcg cattggtaat tacgttactc
     2041 gatgccatgg ggattggcct tatcatgcca gtcttgccaa cgttattacg tgaatttatt
     2101 gcttcggaag atatcgctaa ccactttggc gtattgcttg cactttatgc gttaatgcag
     2161 gttatctttg ctccttggct tggaaaaatg tctgaccgat ttggtcggcg cccagtgctg
     2221 ttgttgtcat taataggcgc atcgctggat tacttattgc tggctttttc aagtgcgctt
     2281 tggatgctgt atttaggccg tttgctttca gggatcacag gagctactgg ggctgtcgcg
     2341 gcatcggtca ttgccgatac cacctcagct tctcaacgcg tgaagtggtt cggttggtta
     2401 ggggcaagtt ttgggcttgg tttaatagcg gggcctatta ttggtggttt tgcaggagag
     2461 atttcaccgc atagtccctt ttttatcgct gcgttgctaa atattgtcgc tttccttgtg
     2521 gttatgtttt ggttccgtga aaccaaaaat acacgtgata atacagatac cgaagtaggg
     2581 gttgagacgc aatcgaattc ggtatacatc actttattta aaacgatgcc cattttgttg
     2641 attatttatt tttcagcgca attgataggc caaattcccg caacggtgtg ggtgctattt
     2701 accgaaaatc gttttggatg gaatagcatg atggttggct tttcattagc gggtcttggt
     2761 cttttacact cagtattcca agcctttgtg gcaggaagaa tagccactaa atggggcgaa
     2821 aaaacggcag tactgctcgg atttattgca gatagtagtg catttgcctt tttagcgttt
     2881 atatctgaag gttggttagt tttccctgtt ttaattttat tggctggtgg tgggatcgct
     2941 ttacctgcat tacagggagt gatgtctatc caaacaaaga gtcatcagca aggtgcttta
     3001 cagggattat tggtgagcct taccaatgca accggtgtta ttggcccatt actgtttgct
     3061 gttatttata atcattcact accaatttgg gatggctgga tttggattat tggtttagcg
     3121 ttttactgta ttattatcct gctatcgatg accttcatgt taacccctca agctcagggg
     3181 agtaaacagg agacaagtgc ttagttattt cgtcaccaaa tgatgttatt ccgcgaaata
     3241 taatgaccct cttgataacc caagagggca ttttttacga taaagaagat ttagcttcaa
     3301 ataaaaccta tctattttat ttatctttca agctcaataa aaagccgcgg taaatagcaa
     3361 taaattggcc ttttttatcg gcaagctctt ttaggttttt cgcatgtatt gcgatatgca
     3421 taaaccagcc attgagtaag tttttaagca catcatcatc ataagcttta agttggttct
     3481 cttggatcaa tttgctgaca atggcgttta ccttaccagt aatgtattca aggctaattt
     3541 tttcaagttc attccaacca atgataggca tcacttcttg gatagggata aggtttttat
     3601 tattatcaat aatataatca agataatgtt caaatatact ttctaaggca gaccaaccat
     3661 ttgttaaatc agtttttgtt gtgatgtagg catcaatcat aattaattgc tgcttataac
     3721 aggcactgag taattgtttt ttatttttaa agtgatgata aaaggcacct ttggtcacca
     3781 acgcttttcc cgagatctca tctattgaaa cagcttgata gcctttttca acaaacaata
     3841 ttcgtgctga gttaaccagt gattgatagg tactcttaaa attttcttgt tgatgatttt
     3901 tattttccat gatagattta aaataacata ccgtcagtat gtttatggta tcatgatgat
     3961 gtggtcgtga caatcttaag aacatttagg ttattttatg tatattgaac agcattctcg
     4021 ctatcaaaat aaagctaata acatccaatt aagatatgat gataagcagt ttcatacaac
     4081 ggttatcaaa gatgttctat tatggattga acataattta gatcagtctt tactgcttga
     4141 tgatgtggcg aataaagcgg gttataccaa gtggtatttt cagcggctgt tcaaaaaagt
     4201 aacaggggtc acactggcta gctatattcg tgctcgtcgt ttgacgaaag cggctgttga
     4261 gttgaggttg acgaaaaaaa ctatccttga gatcgcatta aaatatcaat ttgattccca
     4321 acaatctttt acacgtcgat ttaagtacat ttttaaggtt acaccaagtt attatcggcg
     4381 taataaatta tgggaattgg aggcaatgca ctgagagatc ccctcataat ttccccaaag
     4441 cgtaaccatg tgtgaataaa ttttgagcta gtagggttgc agccacgagt aagtcttccc
     4501 ttgttattgt gtagccagaa tgccgcaaaa cttccatgcc taagcgaact gttgagagta
     4561 cgtttcgatt tctgactgtg ttagcctgga agtgcttgtc ccaaccttgt ttctgagcat
     4621 gaacgcccgc aagccaacat gttagttgaa gcatcagggc gattagcagc atgatatcaa
     4681 aacgctctga gctgctcgtt cggctatggc gtaggcctag tccgtaggca ggacttttca
     4741 agtctcggaa ggtttcttca atctgcattc gcttcgaata gatattaaca agttgtttgg
     4801 gtgttcgaat ttcaacaggt aagttagttg ctagaaccca tggctccttt gccgacgctg
     4861 agtagatttt aggtgacggg tggtgacaat gagtccgtgt cgagcgctga ttttttcggc
     4921 ctttagagcg agatttatac aatagaattt ggcatgagat tggattgctt ttagtcagcc
     4981 tcttatagcc taaagtcttt gagtgactag atgacatatc atgtaagttg ctgataggtt
     5041 tccagttttc cgctcctagg tctgcatatt gtacttttcc tcttactcga cttaaccagt
     5101 accaacccag cttctcaacg gatttatacc atggcacttt aaagccagca tcactgacaa
     5161 tgagcggtgt ggtgttactc ggtagaatgc tcgcaaggtc ggctagaaat tggtcatgag
     5221 ctttctttga acattgctct gaaagcggga acgctttctc ataaagagta acagaacgac
     5281 cgtgtagtgc gactgaagct cgcaatacca taagtcgttt ttgctcacga atatcagacc
     5341 agtcaacaag tacaatgggc atcgtattgc ccgaacagat aaagctagca tgccaacggt
     5401 atacagcgag tcgctctttg tggaggtgac gattacctaa caatcggtcg attcgtttga
     5461 tgttatgttt tgttctcgct ttggttggca ggttacggcc aagttcggta agagtgagag
     5521 ttttacagtc aagtaatgcg tggcaagcca acgttaagct gttgagtcgt tttaagtgta
     5581 att
//
LOCUS       DADKRT010000226         5473 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.231, whole genome shotgun sequence.
ACCESSION   DADKRT010000226 DADKRT010000000
VERSION     DADKRT010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5473
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.231"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(35..772)
                     /gene="bamD"
                     /locus_tag="JQ356_003858"
     CDS             complement(35..772)
                     /gene="bamD"
                     /locus_tag="JQ356_003858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HAY4623794.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
                     PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
                     TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM
                     ENAYRQMQMNAQAEKVAKIIAANSSNT"
     gene            907..1887
                     /gene="rluD"
                     /locus_tag="JQ356_003859"
     CDS             907..1887
                     /gene="rluD"
                     /locus_tag="JQ356_003859"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HAY4623795.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
                     VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
                     VVHPGAGNLDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
                     RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
                     QALHATMLRLYHPISGIEMEWHAPIPEDMVELIEVMRADFEEHKDEVDWL"
     gene            1884..2615
                     /gene="pgeF"
                     /locus_tag="JQ356_003860"
     CDS             1884..2615
                     /gene="pgeF"
                     /locus_tag="JQ356_003860"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HAY4623796.1"
                     /translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
                     EHVEENRKQLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNRAGTEVAAVHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
                     AFEVGAEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY
                     TENETFFSYRRDKTTGRMASFIWLI"
     gene            2745..5318
                     /gene="clpB"
                     /locus_tag="JQ356_003861"
     CDS             2745..5318
                     /gene="clpB"
                     /locus_tag="JQ356_003861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HAY4623797.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
                     HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
                     VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE
                     ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
                     Q"
BASE COUNT         1354 a         1304 c         1484 g         1331 t
ORIGIN      
        1 ctcaagggct gccgttttgt gtttcaggtt tctgttatgt attgctgctg tttgcggcga
       61 tgattttcgc tactttttca gcttgcgcat tcatctgcat ctgacggtat gcattttcca
      121 tcagtggcag cgcatcacgc gtagcctggg tatccgggta gtcgcgcaac atgccttcta
      181 cgcggttaac gacggcaacc catgcaccac gttctgtata gtactcggca acggagtatt
      241 catatttcgc cagacgatct ttcaggaata ccagacgttt ggttgcatcg gtagtgtact
      301 gactgttcgg atagccgcgc accagtttgg aaaagtcact aaacgcagct cgtgcatgtt
      361 gaggatcgcg atcgctacgg tcaacgccaa agaacccttg cagcgcactg tcatccagcg
      421 ccatattggt caggccacgc atgtacatga cataatcgat attcggatgg gtcgggttaa
      481 ggcgaataaa acgatcgatg gcagcctgtg ctaacggcaa atcggcgttt ttatagtagg
      541 cgtagatgag atccagctgc acctgctgcg aatacggacc aaacggatag cgattatcta
      601 atgcttccag ttgcgttatt gcctgtctcc agttaccgtc ctgcagcttt tgttgtgcag
      661 tcgcgtaaat ttcatttggt ggattatcag gtacttcttc ctttgacccc gagcaacccg
      721 ccaaaaacag gcttagtgtg gcggctgcca ccagatattt catgcgcgtc atgacgtttt
      781 gactttcctc aaaatgtaat acgggagatt ctctgttcct gctcccggtt aagaccagct
      841 acaatagcac actatattaa acggcaaagc cgtaaaaccc caacgataaa cgaagaagca
      901 gtatatatgg cacaacgagt acagctcact gcaacggtgt ccgaaaacca actcggtcaa
      961 cgcttagatc aggctttggc cgaaatgttc ccggattatt cacgttcgcg aataaaagaa
     1021 tggatcctcg accagcgcgt gctggtaaac ggcaaagttt gtgataagcc gaaagaaaaa
     1081 gtattgggtg gcgagcaggt tgccatcaac gctgagattg aagaagaagc gcgttttgaa
     1141 ccgcaggata tcccgctgga tatcgtctat gaagatgaag atatcatcgt cattaataaa
     1201 ccgcgcgacc tggtggtaca tcctggcgcg ggtaacctgg atggcacggt actgaatgcg
     1261 ttgcttcatt attatccgcc cattgccgat gtaccgcgtg cgggcatcgt ccatcgtctg
     1321 gataaagaca ccactggcct gatggttgtg gcaaaaaccg ttccggctca gacgcgttta
     1381 gtcgaatctt tgcaaaggcg tgaaattact cgtgagtatg aagcggtggc aattggtcat
     1441 atgaccgctg gcggtacagt agatgaacca atcagccgcc acccgaccaa acgtactcac
     1501 atggcggtgc atcccatggg caaaccggcg gtcactcact atcgcatcat ggaacacttc
     1561 cgtgtgcaca cgcgtctgcg gttgcgtctg gaaaccggac gtacgcacca gatccgcgtg
     1621 catatggcgc atattaccca tccgctggtg ggcgatccgg tttatggtgg ccgtccgcgt
     1681 ccgccaaaag gtgcttcgga agcgtttatc tccacgctgc gtaagtttga ccgccaggcg
     1741 cttcatgcaa ctatgctgcg tctttatcac ccgatctccg gcatcgaaat ggaatggcat
     1801 gcgcctattc cagaagatat ggtggagttg attgaggtta tgcgcgccga tttcgaagag
     1861 cataaggatg aagtggactg gttatgagta agctgattgt cccgcagtgg ccgctgccaa
     1921 aaggtgttgc ggcctgtagc tctacccgta tcggcggcgt gagcttgcca ccttacgact
     1981 ctctcaacct tggcgctcat tgtggtgata acccggagca cgtagaggag aatcgcaagc
     2041 aactttttgc tgcgggaaat ttgccttcaa aaccggtctg gcttgagcag gtacacggca
     2101 aagatgtgct taagctcact ggcgaacctt atgcctcaaa acgggcggat gcctcttata
     2161 gcaatacgcc cggcacggtt tgcgcagtga tgactgccga ctgcctccct gtgctgtttt
     2221 gcaatcgagc gggaacggaa gtcgccgccg ttcatgctgg ctggcgtgga ctgtgcgcag
     2281 gcgtgctgga agagacggtt tcctgttttg ctgataaacc tgaaaacatt ctcgcctggt
     2341 tagggccggc aattggtcca cgcgcgttcg aagtgggggc ggaggttcgc gaggcgttta
     2401 tggcagtaga cgctaaagca agtgcagctt tcattcagca tggtgataag tatctggcgg
     2461 atatttatca gcttgcccgg cagcgtctgg cgaacgtggg tgttgagcaa attttcggcg
     2521 gcgaccgttg tacatatacg gaaaatgaga ctttcttctc ttatcgtcgc gacaagacca
     2581 ccggtcgtat ggcaagtttc atttggctga tataacctaa agaatcaaga cgattcggta
     2641 cgcgtgattt tcttttcaca ttaatctggt caataacctt gaataattga gggatgacct
     2701 catttaatct ccagtagcaa ctttgatccg ttatgggagg agttatgcgt ctggatcgtc
     2761 ttactaataa attccagctt gctcttgccg atgcccaatc acttgcactc gggcacgaca
     2821 accaattcat cgaaccactt catttaatga gcgccctgct gaatcaggaa gggggttcgg
     2881 ttagtccttt attaacatcc gctggcataa atgctggcca gttgcgcaca gatatcaatc
     2941 aggcattaaa tcgtttaccg caggttgaag gtactggtgg tgatgtccag ccatcacagg
     3001 atctggtgcg cgttcttaat ctttgcgaca agctggcgca aaaacgaggt gataacttta
     3061 tctcgtcaga actgttcgtt ctggcggcac ttgagtctcg cggcacgctg gccgacatcc
     3121 tgaaagcagc aggggcgacc accgccaaca ttactcaagc gattgaacaa atgcgtggag
     3181 gtgaaagcgt gaacgatcaa ggtgctgaag accaacgtca ggctttgaaa aaatatacca
     3241 tcgaccttac cgaacgagcc gaacagggca aactcgatcc ggtgattggt cgtgatgaag
     3301 aaattcgccg taccattcag gtgctgcaac gtcgtactaa aaataacccg gtactgattg
     3361 gtgaacccgg cgtcggtaaa actgccatcg ttgaaggtct ggcgcagcgt attatcaacg
     3421 gcgaagtgcc ggaaggattg aaaggccgcc gcgtactggc gctggatatg ggcgcgctgg
     3481 tggctggggc gaaatatcgc ggtgagtttg aagaacgttt aaaaggcgtg cttaacgatc
     3541 ttgccaaaca ggaaggcaac gtcatcctgt ttatcgacga attacatacc atggtcggcg
     3601 cgggtaaagc cgatggcgca atggacgccg gaaacatgct gaaaccggcg ctggcgcgtg
     3661 gtgaattgca ctgcgtaggt gccacgacgc ttgacgaata tcgccagtac atcgaaaaag
     3721 atgctgcgct ggaacgtcgt ttccagaaag tgtttgttgc cgagccttct gttgaagata
     3781 ccattgcgat tctgcgtggc ctgaaagaac gttacgaatt gcaccaccat gtgcaaatta
     3841 ctgacccggc aattgttgca gcagcgacgt tgtctcatcg ctacattgct gaccgtcagc
     3901 tgccggataa agccatcgac ctgatcgatg aagcagcatc cagcattcgt atgcagattg
     3961 actcaaaacc agaagaactc gaccgactcg atcgtcgtat catccagctc aaactggaac
     4021 aacaggcgtt aatgaaagag tctgatgaag ccagtaaaaa acgcctggat atgctcaacg
     4081 aagaactgag cgacaaagaa cgtcagtact ccgagttaga agaagagtgg aaagcagaaa
     4141 aggcatcgct ttctggtacg cagaccatta aagcggaact ggaacaggcg aaaatcgcta
     4201 ttgaacaggc tcgccgtgtg ggggacctgg cgcggatgtc tgaactgcaa tacggcaaaa
     4261 tcccggaact ggaaaagcaa ctggaagccg caacgcagct cgaaggcaaa actatgcgtc
     4321 tgttgcgtaa taaagtgacc gacgccgaaa ttgctgaagt gctggcgcgt tggacgggga
     4381 ttccggtttc tcgcatgatg gaaagcgagc gcgaaaaact gctgcgtatg gagcaagaac
     4441 tgcaccatcg cgtcattggt cagaacgaag cggttgatgc ggtatctaac gctattcgcc
     4501 gtagccgtgc ggggttggcg gatccaaatc gcccgattgg ttcattcctg ttcctcggcc
     4561 caacgggtgt ggggaaaact gagctttgta aggcgctggc gaactttatg tttgatagcg
     4621 acgaggcgat ggtccgtatc gatatgtccg agtttatgga gaaacactcg gtgtctcgtc
     4681 tggttggtgc gcctccggga tatgtcggtt atgaagaagg tggctacctg accgaagctg
     4741 tgcgtcgtcg tccgtattcc gtcatcctgc tggatgaagt ggaaaaagcg catccggatg
     4801 tcttcaacat tctgttgcag gtactggatg atggtcgtct gactgacggg caggggagaa
     4861 cggtcgactt ccgtaatacg gttgtcatta tgacctctaa cctcggttcc gatttgattc
     4921 aggaacgctt cggtgaactg gattatgcgc acatgaaaga gctggtgctc ggtgtggtaa
     4981 gccataactt ccgtccggaa ttcattaacc gtattgatga agtggtggtc ttccatccgc
     5041 tgggtgaaca gcacattgcc tcgattgcgc agattcagtt gaaacgtctg tacaaacgtc
     5101 tggaagaacg tggttatgaa atccacattt ctgacgaggc gctgaaactg ctgagcgaga
     5161 acggttacga tccagtctat ggtgcacgtc ctttgaaacg tgctatccag cagcagatcg
     5221 aaaacccgct ggcacagcaa atactgtctg gtgaattggt tccgggtaaa gtgattcgcc
     5281 tggaagttaa tgaagaccgg attgtcgctg tccagtaatg ataaaacgag cccttcgggg
     5341 ctcgtttttg tctataagtt agacggaaaa gactatattt aagatgtttt gcctgaaaaa
     5401 tgagcgaacg ataaagtttt tatatttttc gcttgtcagg ccggaataac tccctataat
     5461 gcgccaccac tga
//
LOCUS       DADKRT010000227         5437 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.232, whole genome shotgun sequence.
ACCESSION   DADKRT010000227 DADKRT010000000
VERSION     DADKRT010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5437
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.232"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..914
                     /locus_tag="JQ356_003862"
     CDS             <1..914
                     /locus_tag="JQ356_003862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY4623798.1"
                     /translation="PLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHG
                     VLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGE
                     VDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSV
                     SSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYAT
                     AGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKV
                     CTGRWRDLNLCVVVVAALFALKIILVD"
     gene            967..1419
                     /locus_tag="JQ356_003863"
     CDS             967..1419
                     /locus_tag="JQ356_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1198 domain-containing protein"
                     /protein_id="HAY4623799.1"
                     /translation="MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVES
                     MVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKAR
                     LAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH"
     gene            1630..2820
                     /gene="nepI"
                     /locus_tag="JQ356_003864"
     CDS             1630..2820
                     /gene="nepI"
                     /locus_tag="JQ356_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418118.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine ribonucleoside efflux pump NepI"
                     /protein_id="HAY4623800.1"
                     /translation="MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT
                     PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRCYVVILFAVLLTLSCLLV
                     SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA
                     APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPSEPSHQKQNTFRLLQRPGV
                     MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFIL
                     KRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL
                     ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVK
                     MKKS"
     gene            complement(2861..3154)
                     /locus_tag="JQ356_003865"
     CDS             complement(2861..3154)
                     /locus_tag="JQ356_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623801.1"
                     /translation="MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKI
                     CTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM"
     gene            3376..4194
                     /gene="nlpA"
                     /locus_tag="JQ356_003866"
     CDS             3376..4194
                     /gene="nlpA"
                     /locus_tag="JQ356_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpA"
                     /protein_id="HAY4623802.1"
                     /translation="MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQ
                     DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGY
                     KLVAVGNTFVFPMAGYSKKITTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
                     GKGLLHTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS
                     VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW"
     gene            complement(4221..5120)
                     /locus_tag="JQ356_003867"
     CDS             complement(4221..5120)
                     /locus_tag="JQ356_003867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY4623803.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
                     IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSLSPAALF
                     WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
                     LGTLLILSSVILISMDSRRRPEK"
     gene            complement(5231..5434)
                     /locus_tag="JQ356_003868"
     CDS             complement(5231..5434)
                     /locus_tag="JQ356_003868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000965477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HAY4623804.1"
                     /translation="MLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYH
                     ALFWLAIGMLGIAMICLLFIKDI"
BASE COUNT         1299 a         1238 c         1391 g         1509 t
ORIGIN      
        1 ttcccttaag tttacgtatt ggtatcacca gcggaattgg attatttatc gccttaatgg
       61 gattaaaaaa tactggcgtt attgtcgcca ataaagacac gctggtgatg attggcgatt
      121 taagttctca cggcgtgttg ttaggtattt tagggttttt tattataacc gtgttgtcat
      181 cacgtcattt tcatgccgcg gtgctggttt ctatagtggt gacgtcttgc tgtggattat
      241 ttttcggtga tgttcatttt agcggcgtct attccattcc gcctgatatt agcggcgtca
      301 ttggtgaagt agatttgagc ggcgcgttaa cacttgaact cgccggtatc attttctcct
      361 ttatgctgat caacctattt gattcatcag gaacattaat tggtgtaact gataaagcgg
      421 gcttaataga tggtaacggt aaattcccca atatgaataa ggcgctgtat gttgatagcg
      481 tcagttcggt ggcgggtgcg tttatcggca cctcgtctgt tactgcctat attgaaagta
      541 cttctggtgt ggcagtcggt ggccgcacgg ggctgactgc ggttgtggtt ggcgttatgt
      601 tcctgttggt tatgttcttc tcaccgctgg tggcgatggt tcctccttac gcaaccgccg
      661 gagcgttaat ctttgttggc gtgctgatga cttcgagcct ggcgcgcgtt aactgggatg
      721 attttaccga atcggtgcct gcgtttatta ccacggtgat gatgcccttt actttctcga
      781 tcaccgaagg gattgcactc ggctttatgt cgtactgcat catgaaagtg tgcaccgggc
      841 gctggcgcga tctgaacctg tgtgtggtgg tggtcgcagc tctgtttgca ctgaagatta
      901 ttctggtgga ttagtaactg gcgagggttt ccagatatca tgagttctga ttacgcagga
      961 gaactcatga tctggataat gctcgccacg ctggcggtag tgtttgtggt tggttttcgg
     1021 gtgctgacat ccggggccag aaaagcgatt cgccgtctca gtgatcggct gaatatcgat
     1081 gtcgtacccg tggagtcgat ggtcgatcaa atgggaaagt cagccggtga cgaattttta
     1141 cgttatttgc atcgcccgga tgagtcgcac ctgcaaaacg ccgcgcaggt gttgctcatc
     1201 tggcaaattg tcattgtcga tggtagcgaa cagaacctgc tgcaatggca tcggatttta
     1261 caaaaagccc gtcttgccgc gccgattacc gatgctcaag tcaggctggc gctgggtttt
     1321 ctgcgcgaaa ccgaacctga aatgcaggat attaatgctt ttcagatgcg ctataacgcg
     1381 ttctttcagc ctgccgaggg cgttcactgg ctgcattaaa accgcttcgt cttatcagcc
     1441 tacagaccgc gcctgacctg tcgggtggat aagacgttca cgccgcatcc ggtaatcttt
     1501 gccctgttcc gtttcgatct taactccagc tcaagcaaca ccgtaaaagt tgcaaaaacg
     1561 ttaaatgcat cacacatttc aatgttaaag tggtcggctt ttcccctgaa acatgccacg
     1621 ggtaacacca tgagtgaatt tattgccgaa aaccgcggcg cggatgccat cacccgaccg
     1681 aactggtcag ccgttttctc ggtggcgttt tgtgtcgcct gtctgattat cgttgagttt
     1741 ttgcccgtca gtttgttgac gccaatggcc caggatttag gcatttcgga aggggttgcc
     1801 gggcaatcgg tgaccgtgac cgcctttgtg gcaatgtttg ccagtttgtt tattacccag
     1861 acaattcagg ctactgaccg ctgctacgtt gttattttgt ttgccgtttt gctgacgctc
     1921 tcctgcttgc tggtttcctt tgctaactca ttcagtttgc ttttaatcgg tcgtgcctgt
     1981 ctggggctgg cgctgggcgg gttctgggcg atgtcggcgt cgctgaccat gcgtctggtg
     2041 ccgccgcgta cggtgccgaa ggcgctgtcg gtgatcttcg gcgcggtttc tattgcgctg
     2101 gtgattgccg cgccgttggg cagtttttta ggcgagctta tcggttggcg caatgtcttt
     2161 aatgcggcgg cggtgatggg cgtgctgtgt attttctgga ttatcaaatc attgccttca
     2221 ctgccaagcg aaccctcgca tcagaaacaa aatactttcc gcttattaca acgtccgggt
     2281 gtgatggcag ggatgatcgc catcttcatg tctttcgccg ggcagtttgc tttcttcacg
     2341 tatattcgcc cggtgtatat gaacctggcg ggattcggcg tggatggctt aacgctggtg
     2401 ctgttgagtt ttggtatcgc cagctttatt ggtacgtcgc tttcgtcgtt cattcttaaa
     2461 cgttcggtaa aactggcctt agcaggcgcg ccgttaatac tggctgtgag tgcgttggta
     2521 ctgacgttgt ggggaagcga taaaatcgtt gctaccggcg tggcgattat ctgggggcta
     2581 acttttgcat tggttcccgt cggctggtca acgtggatca cccgctcgct ggccgatcag
     2641 gcagaaaaag ccgggtctat tcaggtggcg gttattcagc ttgctaatac ctgtggcgcg
     2701 gcaatcggcg gttatgcgct ggataatatt ggtctgactt cgccgttgat gttgtccggc
     2761 acattgatgt tgctgactgc attgttggtt actgcaaagg tgaaaatgaa gaaatcctga
     2821 tatcaggtaa agaagcgttg gtcagtagtt gttgctgttc ttacatatcc gggcattcta
     2881 ccttacccaa cgcttcccaa taattgctct gattattacg ttccatcgcc acgatggcct
     2941 cgcgtatatg ttgtttattg ttttcatctg acaacattaa cttttcccac gcttcatctg
     3001 ataatgacgc ctgtggcgtg caaattttac gtaaatcttg taataccgtg gttttctctt
     3061 ttgcggactg cagtgagcta aaaggcgact cggcgtatac gatgcctggc atagcgaaaa
     3121 aagtgaaaat aagcagtagt gtcgttggtt tcatggattc aaccttttac aaatgtgtat
     3181 cgaatgaagc ataagtgtag tttgctttca tcgctctcat cattctgtac gaaacgcgct
     3241 tgcgtggtca gtaagaagtg ccagacttta tattccactt ttattccttt ttattcttat
     3301 cgatagcgtt tcgtttttta aaccgcagcg accttaccgc tatagtcagg taatcattaa
     3361 taaaaggata aaaaaatgaa actgacaaca catcatctac ggacaggggc cgcattattg
     3421 ctggccggaa ttctgctggc aggttgcgac cagagtagca gcgatgcaaa acacattaaa
     3481 gttggcgtta taaatggcgc agaacaagat gtcgcggaag tcgctaaaaa ggtggcaaaa
     3541 gagaaatatg gcctcgatgt tgaactggta ggatttagcg gttcgttgct accgaacgat
     3601 gcgacaaatc atggcgaact tgatgcgaat gtcttccagc atcgaccctt tcttgaacaa
     3661 gataatcagg cgcatggtta taaactggta gcggtgggaa atacgtttgt cttccctatg
     3721 gcgggttatt ccaaaaaaat cacaaccgtg gcgcaaataa aagaaggcgc gacagtggcg
     3781 atccccaacg acccgaccaa ccttggtcgc gcacttttac tgttgcaaaa agagaagcta
     3841 attactctga aagagggaaa agggttatta cataccgcgc tggatataac cgataatcct
     3901 cgtcatttgc agattatgga actcgagggg gcgcagcttc cgcgcgtact ggatgatccc
     3961 aaagttgatg tagcgattat cagcaccact tacattcagc agacagggct ttctccggtg
     4021 cacgacagcg tatttattga agataagaat tcgccgtatg tgaatatttt ggtggcacgg
     4081 gaagataata agaatgcaga aaacgtgaag gaatttctgc aatcttatca atcacccgaa
     4141 gtcgctaaag cggcagaaac catttttaac ggtggcgcgg tgcctggctg gtaattctca
     4201 ctcatgccgc gccggacgat ttatttttct ggccggcgac gggaatccat tgaaatcaaa
     4261 atcaccgatg acagaatcag cagcgttccc agccagtccg gtaatgtgaa cgtgatcccc
     4321 agcaacagca aagagagtag cgcgctactt aatggttctg cacagctcaa aatgctggct
     4381 tttggaccgc caattaattg tgctcctttc aggtacagac taaatgtcag ggacgtacca
     4441 atgaccacca aataaaaaaa cgccagaatc aaactgccgt taacgacaaa gtttgttcct
     4501 tgtctggcat aaaaaggcaa cagaatcaga ccgccaatca gcatactcca gccgacgact
     4561 ggtaacgtgc catagcgggc aattagcgtt gagggatagg tggtatagaa tgcagcagca
     4621 aatgccgagg caatgcccca gaacaacgcg gcaggagaga gcgataatga cgtcggatta
     4681 ccgtgtgtca ccaataaaaa agtcccgacc agcgatgtca aaatagcgca gaaaaccaga
     4741 atgcccgggc gcgatttacg caccagtgag aaccaggcga cgataatcgt cggtgagagg
     4801 aattgcagca ccgttgccgt ggctgcgttc gatttttcga tggttagcaa aaaagtgagc
     4861 tgtacagtta gcgcgccaac cacggaaaaa atcagcaggc taatggcatc tttatgattg
     4921 ttaataatag aaaagatttt atcgccatga acaaatgaca gcgtcagtag aatcaaaccg
     4981 gcgaatatca aacgcgtcat agtcaaaaac tgcgacgaca tctggctttg ctccatgatg
     5041 tattgcgcgc agacccctga acttccccac aacacggcgg caatcagaac gttcagcatc
     5101 ccctttctgg tggaacccat ttttccctct gcatactgtt ttgtcgttta tgtatgcagg
     5161 catgatagca aaaatggcga ggatggctct gtttgcgcca cgccgatttt tcttagccca
     5221 gactggtgag ctaaatatct ttaataaaca gcaggcaaat catcgcaata cccaacatcc
     5281 ctatcgccag ccagaacaac gcatggtagc tccagatttc aaccataatt ccgtcaacag
     5341 agccggcgat aatccagccg acgcgtgaag tatttgcata taacgttgtc gcagagccta
     5401 ttttttcagg cattaagtcc tgaaaataaa gcatgcc
//
LOCUS       DADKRT010000228         5394 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.233, whole genome shotgun sequence.
ACCESSION   DADKRT010000228 DADKRT010000000
VERSION     DADKRT010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5394
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.233"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1075
                     /locus_tag="JQ356_003869"
     CDS             <1..1075
                     /locus_tag="JQ356_003869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HAY4623805.1"
                     /translation="VEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETA
                     RLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLWIVARDGVEVPV
                     SLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELG
                     QQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPE
                     LFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQA
                     YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDNHLLLLCTDMDSGHGGKSGRFKSYE
                     GVAMEYAFLVALAQGTLPATPAD"
     gene            complement(1072..1734)
                     /gene="exoX"
                     /locus_tag="JQ356_003870"
     CDS             complement(1072..1734)
                     /gene="exoX"
                     /locus_tag="JQ356_003870"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HAY4623806.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS
                     PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
                     ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
                     MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWSFNNLDSMSPELRLTLKHYLE
                     NT"
     gene            complement(1758..2414)
                     /locus_tag="JQ356_003871"
     CDS             complement(1758..2414)
                     /locus_tag="JQ356_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HAY4623807.1"
                     /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS
                     LSLLACDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW
                     RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR
                     LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
                     "
     gene            complement(2516..2746)
                     /locus_tag="JQ356_003872"
     CDS             complement(2516..2746)
                     /locus_tag="JQ356_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HAY4623808.1"
                     /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ
                     PEHLRSWFRERLIAHRLASVKLSRLPYEPKLK"
     gene            2885..3259
                     /gene="yobA"
                     /locus_tag="JQ356_003873"
     CDS             2885..3259
                     /gene="yobA"
                     /locus_tag="JQ356_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HAY4623809.1"
                     /translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA
                     PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT
                     VDWHVVSVDGHKTKGHYTFSVK"
     gene            3263..4135
                     /gene="copD"
                     /locus_tag="JQ356_003874"
                     /pseudo
     CDS             3263..4135
                     /gene="copD"
                     /locus_tag="JQ356_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416354.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
     gene            4148..4489
                     /locus_tag="JQ356_003875"
     CDS             4148..4489
                     /locus_tag="JQ356_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HAY4623810.1"
                     /translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
                     MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSL
                     APFIERAEKLC"
     gene            complement(4871..5341)
                     /locus_tag="JQ356_003876"
     CDS             complement(4871..5341)
                     /locus_tag="JQ356_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4623811.1"
                     /translation="MDLALVTGQRREDITNMRFSDIYDDRLHIRQIKTGMMIAIPLSL
                     SLPVAGLRLGAVVEQCRMVSRGDYLISAGIRKNSPDGSIHPDGLTKKFVAARKLTGIQ
                     FSENPPTFHEVRSLAGRLYKETCGEEFAQRLLGHTSEKTTKMYLDEREKTYLLL"
BASE COUNT         1336 a         1282 c         1347 g         1429 t
ORIGIN      
        1 ggttgaagag cgtcagcgcg ggttaaccag tttgcgccaa attaaccgca agacccggga
       61 agtcattggt attgcctttg atgatccagc ctatgtgacc tggattgcct acaatccaga
      121 acctgaaacc gcgcgattgc gttatggtta ttcttccatg accacaccag acactttgtt
      181 tgaactggat atggataccg gtgagcgtcg tgtattaaaa caaacggaag ttcctggttt
      241 tgatgcggcg aattaccgca gtgaacacct gtggatagtc gcccgtgatg gcgtcgaagt
      301 tccggtttcg ttggtctacc atcgcaaaca ttttcgcaaa ggacacaacc cgttgctggt
      361 gtatggctat ggttcttacg gcgcaagtat tgatgccgat ttcagtttta gccgcttgag
      421 tttgttagat cgtggctttg tctacgccat tgtccatgtt cgcggcggtg gtgagctggg
      481 gcaacaatgg tacgaagacg gaaaatttct gaagaagaaa aatacgttta atgattatct
      541 tgatgcctgc gatgcattgt taaaactggg ctatggctct ccttcgcttt gttatgcgat
      601 gggcgggagt gcggggggca tgttgatggg cgttgcaatt aatcaacgcc cggaattatt
      661 ccacggcgtt atcgcccagg taccgtttgt tgatgttgta acaacgatgc ttgatgaatc
      721 aattcctctt accactggtg agtttgaaga gtggggtaac ccgcaggatc cgcaatatta
      781 cgagtacatg aaaagctaca gcccgtatga caacgtcacc gcacaggctt atccgcattt
      841 actggtaacg accggtttac acgattctca ggtgcaatat tgggaaccgg caaaatgggt
      901 cgctaaattg cgcgagctga aaaccgataa ccatctttta ttgctctgta ccgacatgga
      961 ctcaggccat ggcggtaaat ctggccgctt taaatcgtac gaaggcgtag cgatggaata
     1021 tgcttttctg gtcgcgctgg cgcagggaac attacccgct acgcctgcgg attaagtatt
     1081 ttccagataa tgtttcagtg ttaaacgcag ctccgggctc atgctgtcca ggttattaaa
     1141 tgaccagcgc agatagcccg gatcgcgttc ggcaacgtcg gaaaccgctt tgccacggta
     1201 tttgccaaag gtgaaggtcg tcatcaacga cggacgtccg gtgatatcgg ccatctgttc
     1261 tgccgtccag ccggaggtgt tcataatatc gataagcaac gcggcggtga tataacagtc
     1321 atacaacgcg cggtgatgat gcaggcccgg cggcgtctgt acattgagct tccgtgtttt
     1381 atataacgcc atattgctgt acttgatccc tggccacaaa cgacgggcca gtttcatagt
     1441 gcaaatccac tcaccgggca tctcaggcag tacgcggcgg tcaaagctgg cgttgtgcgc
     1501 gacataccat tcactaccgt aatagtgtgg gatcacatct tcaatccacg gtttatcggc
     1561 gaccatggct tcggtgatgc gatgaatcgc catcgcttgt ggactaatag gacgatcggg
     1621 gcgcaccagg tggctcatgg ggttgacgat ttttccgtca atgacatcaa cagaggcaat
     1681 ctcaacgatc cctccctgca aaccgcaggt ttctgtatcg ataatgcgca acatggcatg
     1741 ctccaggccg aaaaagccta gcgtaatgga atgatatcgc cttgccaacc ctgtgatgaa
     1801 cgctgaccga ctaacaataa tgaaccacga tcggcgcgaa cgatgagacg accatattca
     1861 tcccatagtg cactgttacc acgggcattt gccatcagca cggcaatcga gtactgatgt
     1921 gaaaaaaatt gtaagcgacg ggccgacgcc agcaggtcgg gttctcccag acattgccct
     1981 gtagtaaaca gtgaacaggt cgggtccata tccatacctt gcggttgttc atcgaccacc
     2041 gtgatggttc tggaacgacg gcccagacat gcaccatgac tctgatggta gatcccaggc
     2101 gtttttcgcc acggtgcgaa caccgcaatt ccacgaataa agcgatcgtt atattcaacg
     2161 ggaaggccgg caatgatggt cattcgccag gtcgttgcgg cataacaaag cgggtctaac
     2221 agtgagagat cgggtggggc aggaagggca cgtcgcgaat aatcacacgc cagtaaagaa
     2281 agcgatggaa aaactaacag ctgacattgt tgcctggcgg cggccctcac aaactccaga
     2341 tgatgagcta cctgttcggt gagtgaggtt ttacgaggct catattgcgc tgctgcaact
     2401 ttccagaacg acataatgac ttccttttca aaatgactgc aaattatggg tgcggtttag
     2461 aaaatactca taatttagca ggcgttatgt aagaaagtgt aactctgtat aagttttatt
     2521 taagtttggg ctcgtaaggt aaacgtgaca gtttgaccga agccaaacgg tgggcaataa
     2581 gcctctcgcg aaaccagctg cgcaaatgtt caggctgttc acgttcaacc gcttcagcga
     2641 tcaccggcat attgtagcgt tctttaaatg ccaccccggc cgccgccaaa tcgacattca
     2701 ctttatccat ttctgtttga tccagtttag ccagattctt cagcattctt aatctcctca
     2761 tcattcgcgg gcaaaagtta ctaagagtga gccaggatgg caagccggaa ttgatgatcc
     2821 tcgactcaga cattagacaa ggttatgctc tgtaaaaaag ttattacaaa aagtaataga
     2881 taatatggct tcaactgcac gctcccttcg ctacgcgctg gcaatcctga ccacttcgtt
     2941 ggtgacacct tccgtctggg cacatgcgca tttaacgcat cagtatcctg cggcaaacgc
     3001 gcaagtgaca gctgcaccgc aggcaatcac tttaaacttc tcggaaggtg ttgaaacagg
     3061 attcagtggt gcaaaaatca cggggccaaa aaacgaaaat attaaaacat taccggcgaa
     3121 gcgaaatgag caggaccaaa agcaactgat tgttccactg gccgattcgc tgaaacccgg
     3181 aacctacacc gttgactggc atgttgtttc ggtggacggg cataaaacga aaggacacta
     3241 cacctttagc gtgaaataaa tcatgctggc gtttacctag atcgcgctgc gatttatcca
     3301 tttcacctcg ctgatgctgg tttttggctt cgcaatgtac ggtgcctggc tggccccctt
     3361 gacgattcgt cgcttgctgg cgaagcgttt tctgcgttta caacagcacg ctgccgtctg
     3421 gagtttgatc agtgccactg caatgctcgc cgttcagggc gggttgatgg gaacgggatg
     3481 gacagatgta ttttcgccaa acatttggca ggctgttttg caaacgcagt ttggtggcgt
     3541 ctggttatgg caaattgttc tcgccctcgt aacgttgatc gtcgccctta tgcaaccgcg
     3601 gaatatgcca cgtttgctgt ttatgctcac taccgcgcaa tttattctgc tggcgggagt
     3661 ggggcatgcg acgctgaatg aaggggtaac ggcgaaaatc catcagacta atcacacgat
     3721 tcacctgatt tgtgcggcgg cgtggtttgg gggattactg ccggtgctct ggtgtatgca
     3781 actcatcaaa ggccgttggc gacaccaggc tattcaggcg ctgatgcgtt tttcatggtg
     3841 cgggcatttt gcggtgatcg gcgtactggc aagcggcgtg cttagtgcat tgttgattac
     3901 cggatttccc cccacgctta cgacttactg gggccaactc ttattgctca aagccatcct
     3961 ggtgatgatt atggtggtca ttgcgctggc taatcgttat gttcttgtac cgcgcatgag
     4021 gcaggatgaa gatcgtgcgg caccctggtt tgtgtggatg actaaactcg aatgggcgat
     4081 aggtgcggta gtgctggtga tcatcagcct gcttgcgact ctcgaacctt tttgatggat
     4141 tacgaaaatg atgaaaaaaa gtattctggc gtttctgtta ctcaccagtt ctgcagcggc
     4201 gctggctgca ccgcaggtga ttaccgtcag tcgttttgaa gtgggtaaag acaaatgggc
     4261 gtttaatcgc gaagaggtga tgctgacttg ccgaccgggt aatgctttgt atgttattaa
     4321 tccgagtacc ctcgtgcagt atcctttaaa cgatatcgca caaaaggaag ttgccagtgg
     4381 gaagaccaat gcccaaccca tttcggtgat tcagattgat gatcctaaca atcccggcga
     4441 aaaaatgagt ctggcaccgt ttatagaacg agctgaaaaa ctctgttaat tacctaaaat
     4501 agccttttga tttccaataa aaaaaccgcc tcagttcttt caccagaacg ggcggtttta
     4561 acatttcagc tgatgaccac cacgcttttt attgaccatt ttgcacgcaa actggaaaac
     4621 ctggcgtcgt catctattct taaagggcaa ggcaactaag cctgcattaa tgccaacttt
     4681 tagcgcacgg ctctctccca agagccattt ccctggaccg aatacaggaa tcgtattcgg
     4741 tcttttttta attgcatttg aaatcaatta gttgcaaatg tctccccgaa atttactcga
     4801 atttctgtat tccggtcttt tttggttata tcacaaccaa aatacattta acaatccatt
     4861 tacgttaaaa tcagagcagt aagtacgttt tttctctctc atcaagatac atttttgttg
     4921 tcttctccga tgtgtggcca agtagacgct gagcaaattc ttctccacat gtttctttgt
     4981 acaatcgtcc agccaggctt ctgacttcgt gaaaagttgg tgggttttca ctgaactgga
     5041 tacctgttaa ttttctggct gcgacaaatt tctttgtcag gccgtccggg tgaatgctgc
     5101 cgtcagggct gttttttcta atcccggcac tgattagata atccccccta cttaccatgc
     5161 ggcactgttc aactactgca ccaagtcgta aaccagcgac aggaaggctg agtgacaggg
     5221 ggatagcaat catcattcct gtcttaattt gcctgatgtg gagacgatca tcataaatat
     5281 cactgaaccg catattcgtt atgtcttcgc gacgttgtcc tgttacaagg gctaaatcca
     5341 tagctaatgg gaaccatgcc ggaagttgat ctgctgcctc cctgatgcag ttgt
//
LOCUS       DADKRT010000229         5338 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.234, whole genome shotgun sequence.
ACCESSION   DADKRT010000229 DADKRT010000000
VERSION     DADKRT010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5338
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.234"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(890..1831)
                     /gene="fabY"
                     /locus_tag="JQ356_003877"
                     /gene_synonym="yiiD"
     CDS             complement(890..1831)
                     /gene="fabY"
                     /locus_tag="JQ356_003877"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HAY4623812.1"
                     /translation="MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAH
                     HQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGV
                     KRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQ
                     LQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWG
                     LIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQM
                     QVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE"
     gene            complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="JQ356_003878"
     CDS             complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="JQ356_003878"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HAY4623813.1"
                     /translation="MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANR
                     LCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRA
                     EALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV"
     gene            complement(2310..3183)
                     /locus_tag="JQ356_003879"
                     /pseudo
     CDS             complement(2310..3183)
                     /locus_tag="JQ356_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312836.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
     gene            complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="JQ356_003880"
     CDS             complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="JQ356_003880"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HAY4623814.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGAWSDLTRVPLATLKKSFHMGEAF
                     HQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD
                     TVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC"
     gene            complement(3917..4804)
                     /locus_tag="JQ356_003881"
     CDS             complement(3917..4804)
                     /locus_tag="JQ356_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HAY4623815.1"
                     /translation="MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHD
                     GARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKP
                     PHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
                     YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWD
                     DCFGFYNGVKVKLLWPGKLAMTMISSANSLVVFDKQPDATCINPLTQAPNAINLTPEL
                     VTPDRPLVIETRWQFTPES"
     gene            complement(4794..>5338)
                     /locus_tag="JQ356_003882"
     CDS             complement(4794..>5338)
                     /locus_tag="JQ356_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY4623816.1"
                     /translation="GIVYISSQLVLSRDIPLTGMLIASAIGIFSCPLVGWLSDRIGQK
                     SLYLSGAGFCVLFAFPFFLLLDSKSTLIIWCSMILGYNLGPTMMFAVQPTLFTRMFGT
                     KVRYTGLSFAYQFSAILGGLSPLIASSLLALGGGKPWYVALFLFAVSVLSFVCVWLIE
                     PTDEQETASYRYIREQSHEN"
BASE COUNT         1442 a         1345 c         1253 g         1298 t
ORIGIN      
        1 tgataaatga agaaaaaccg tattcatcgc cattaccacc accttaccta tattactcat
       61 taatgtatgt gcgaaaatta cgccggaaaa tcattaaaaa aaagcggatt tttgcatgtt
      121 gttttgtttt tgcgaggcgt tttccagaaa taataagagt gttgcagttg tttcatttat
      181 tactcaaaaa tggtttagtt atcgcccagg atgaattatg ggtgctatga atatattata
      241 ttcagagata tttatttgca taatctgaat ggtgtagccg aaaaacgtca gcatcctaac
      301 agcaccagga tttaaggtga aattaatctt tcatcacaga ccggtcagta ctgccaccaa
      361 ccggtcttta cttgctcatc gttataattt tgttggtaac agttcgggaa agttgttttt
      421 ctaaattaac aacagaataa ctttcttgtt taatgagatt aatattggca accattatag
      481 cctccttccc acggtttaag agcaaacata caacataatg attcataaca tacagagcag
      541 taaatgaatg atactgacaa tgatgccagc ccattatctt tgcataatgt ttgtgagcta
      601 tagattttaa aaatatttat gaggaaagta tggcaccaga ggaggttttg actatcaaaa
      661 atcgctcaaa cctgaactaa gatgatgagt taagcattat ctgcgataat tgccactcag
      721 ctctacaaat aatatttaaa tgctcctgaa cagtgatgta gcaagacacg tatggtgcca
      781 acgaagaata aaaatttata gagttcttat tcaatattac cggcatagac agggaatgat
      841 gtaaatgacc ggaatgaatg agagaggcag caccgcccct ctccataagc tactcttctt
      901 cgttcccgcc ctcttcatac gggccaaatg gcttcgcggg cagaacgata tacgtgcctt
      961 caaacactgc acccggcgtc tcgtcgccaa agatttcaac ttgcatctgc acccgtgctt
     1021 ttcgtccgcg cgccagacgg tcgagatcgc cgcttaaggc accaaggtcg gctaccgcat
     1081 gaggtttacc gctaatcggc ttgctgtagc ggatatgcgc atcggccaga ataatcgttc
     1141 cgccgaggtg gcgttcgcgc agcatcagcc agataagccc ccaaccggtg agcgttgcca
     1201 gcgagaataa actcccggca aacagcgtat ggtgcggatt ctgattaccg gtttccggca
     1261 tggtggtgat aaatttttgc ccggtatatt gctgaatgcg cacgcccatt ttttcactaa
     1321 gcgggatgtg ttcgtaccac gcctgttgca gctgcgcgca ccagtcgccg cgatgcaaaa
     1381 tatcatccag agtggcaaca ggtttaatca tcaaaaaatg gcgaatcggc gtggtggttg
     1441 gtgtggtgat ttctccctga ttaacaaacc ccagcttggc gaaaaactcc accgcgtctt
     1501 cacgggcgct acaggtcacg cgcttaacgc cttcctgacg cgccaccgac tccagggtca
     1561 tcgccatcaa cgtccccagc cctttgtcct gcacgtcggg atgaacggcc ataaagcgaa
     1621 tggacgcttc attgtcggca ttaatataca gtcggcctac cgccaccaga ttcccctgct
     1681 cgtcgacgac catctgatga tgcgccatcg catcccacgc gtcgcgttcc gaaccttttg
     1741 gttgatgcag gggcttacgc aacatttccc agcgaaactg atagtaacgc tctaactctt
     1801 cttctgtttg tggaacccga aggtgataca tagcgatact ctctcttgtt tcccgtgaca
     1861 accctggaag ctggctcata cctgcaacca gaatgtcacg gggccatcat tgaccagcga
     1921 tacctgcata tcggcagcga agcgtcctgt ttgcgtgttc atctcttgct ggcggcagcg
     1981 ttcgacgaaa tagtcatata acgcctctgc gcgatccggt gatgcgcctt tggagaaact
     2041 tgggcgcatc ccccgttcgg tatctgcggc gagggtaaac tgggaaacca ccagtacact
     2101 gccgcccgcc tgttgcacgt tgagattcat cttgccttcg gcatcgctaa agatgcggta
     2161 gccgagcaca cgctcgcaca gacggtttgc tttctgttcg tcgtcatcct tttcgacacc
     2221 caataacacc aaaagtcccg cgccaatttc gcccgtcact tctccctcca cggtgacgct
     2281 ggcacgggtt acgcgttgaa ttaatgcaat catggttcgt cgtcttcttc ttgttcagct
     2341 gcttgtttta gtttgcggta ttccccgaga gtgacagtaa tttccgcgcc aagcaagacg
     2401 atacaccatg tccagtagac ccaaacaaag agaatgggga tcaccgccag cacaccgtaa
     2461 atgagctgat atgacgggaa catggtgata taaagcgcga aacctttctt tcctgcttcg
     2521 aacaggagtg cggcgacaaa cgcgccgaca atcgcgtcgc ggttaggtac gcggatggta
     2581 ggaacaatgc tgtacagcaa ccagaaggag atccacgaca acagcaacgg aaaaatacgc
     2641 agcacgttgt cgatgacagt attgagatcg ctcgcccagc gcagggagag caaataggaa
     2701 ctgatcgcca gactggcccc tgccagcagc ggccccagcg ttaaaatcat ccagtacacg
     2761 gcgaacgagt aaatttttgg tcgcgctcgt ttactgcgcc agatggtatt caacgcgcta
     2821 tcgatggagt acatcaacaa taacgcggtg acgatcagcc cgcacgcccc aacggcggtc
     2881 atcttgttgg aattggcaac aaattgttcg atataccgct gaataacatc gccagtagca
     2941 ggcagaaagt tggcaaaaat aaagtgacgt aactgaatgc tgacgtcgga aaacatggga
     3001 aaagcggcga aaagcgcaaa aacaacggca accagcggca ctaatgagag caacgaccac
     3061 ataggcaagg ttacctgcca gggttgtcat gttgtcctca tcaatacgtt gccagagtag
     3121 ttttagccag gcccatagtg gacgggtacg gtgcctggct ttgtcctgaa tggtttttag
     3181 cataacacct tcgcgaaata gtccgggatg gtggttttat ctttcaccag aatactggta
     3241 atgcccagct gattggctcc ttctatatta tcggcgttat cgtcgaaaaa gaccgtatcg
     3301 ctgggtgaaa aaccttccgc ctgcaaaaca tgctggtaaa ttcgtgcttc aggtttgcgc
     3361 atccccagat cttgcgacag atagatatgg tcagcagcat cacgaatttc cgggtattct
     3421 tccggccaga aggtggtatg caggcggttg gtattggaaa gcaccaccac gcgatgcccc
     3481 tgctcacgca gtttatgcat gatggcgatc acttccgggc gcagcgcaac aaacaccgcc
     3541 tgccagccgt gagagaactg ctcgtagctt agcggtagag ccatctcatg acacagcgcc
     3601 tctgcgaacg cttcgtcgct aatttcccca cgctcatgct gatgaaacgc ctcccccata
     3661 tgaaaactct tcttaagcgt agccagtgga acacgcgtta aatcgctcca ggctcccagc
     3721 acacggttaa agtcgatatc gacaatcaca ttacctaaat caaagatata gagcattttt
     3781 gcctcctttc gcgccacaag aaattaactg tagcgggaaa ggatgggttt ggctatgtgg
     3841 caataagggt aatcttgtga tgctgattgc gaaaaagcag agtaatttca ctggcttttt
     3901 cgcaatagat gaatggttaa gattcaggtg taaattgcca acgagtttcg atgaccagcg
     3961 gcctatctgg tgtcaccaat tccggcgtta gatttattgc gttaggtgcc tgagtcagcg
     4021 ggttaataca ggtggcatcg ggctgtttat caaataccac cagactgttt gcagaagaga
     4081 tcatggtcat cgcgagttta ccaggccaca gtaacttaac cttcaccccg ttataaaaac
     4141 caaaacagtc atcccaggga ccggcttgag gagagatacg atttccagtt ggcagttcat
     4201 cactacccgc ttcttcttgc cagtccgcat caaaaagcac ctgcaacgat tctgtatttt
     4261 gcggagtcag ctttttcgca aaccacggat gccagccagc ggaggccggg aatgtatcgg
     4321 catatgaatg gacttccagt tgcaaaacca gcgcatcgtt ctccagcaaa aaagtctgaa
     4381 tcacttcccc ttgccagggc cacggtgaag ccaggggcat acgtaaagtc agggaatctg
     4441 ctgttttgtc gatgatttcc cacgttgagt aacaagccat accatgcaac gcatgtggtg
     4501 gtttattggc gggtaaagaa taacattgcc caccagcatt cagcgtcgca ttccccagtc
     4561 gccctgccca cggcaccatt gggaaacagc catactgaaa agctctgcgc tgcggctgcc
     4621 attggcgtaa tacttcagaa ccaaatgcct ttaacgaggt tatcctggca ccatcatgcg
     4681 gataaatctg caggtgaata ttgccttttt ccagcgtcac taactctcct acaggcccag
     4741 gccatggcgc gtcaaacgcc tgttgtagcg ccaggtaatg ctcgtttttt cgttcagttt
     4801 tcatgagatt gttccctgat gtagcggtaa gaagcggttt cttgttcatc ggtcggctca
     4861 atcagccaga cgcaaacaaa ggaaagaact gagacagcaa ataaaaacag agcgacatac
     4921 cacggttttc ctccccctag cgccagcaaa cttgaggcga taagggggct tagtccgcca
     4981 agaatcgcgg aaaattgata agcaaaagaa aggccggtat atcgtacttt ggtaccgaac
     5041 atgcgggtga aaagtgttgg ctgcacggca aacatcatcg tcggacctaa gttgtagccg
     5101 aggatcatac tgcaccagat gatgagcgta cttttgctat ccagtaataa gaagaaagga
     5161 aacgcgaaca ggacacaaaa tcctgctccc gacaaataca gacttttttg acctatacga
     5221 tctgataacc atccaaccaa tggacaactg aaaataccga tcgccgaggc aatcaacata
     5281 cccgtcaggg gaatatctcg cgacaatact aattggctgg aaatatagac aataccaa
//
LOCUS       DADKRT010000230         5318 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.235, whole genome shotgun sequence.
ACCESSION   DADKRT010000230 DADKRT010000000
VERSION     DADKRT010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5318
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.235"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1279
                     /locus_tag="JQ356_003883"
     CDS             <1..1279
                     /locus_tag="JQ356_003883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4132 domain-containing protein"
                     /protein_id="HAY4623817.1"
                     /translation="EFVWDLFTAWLTAGAPSKESWAFTALGVLGNDDTARKLTPLIRA
                     WPGESQHKRATVGLDILAAIGSDIALMQLNGIAQKLKFKALQERAKEKIADIAESREL
                     TVAELEDRLAPDLGLDDNGSLLLDFGPRQFTVSFDETLKPFVRDASGSRLKDLPKPNK
                     SDDESRSNDAVNRYKLLKKDARIVAAQQVARQESAMCLRRRWSPENFKLFLVEHPLVR
                     HLTRRLIWGVYSAENQLQACFRVAEDNSYSTADDDLFTLPEGGISIGIPHVLEISPTD
                     AAAFGQLFADYELLPPFRQLDRNSYALTGAERNASELTRWAGRKCPSGRVMGLANKGW
                     IKGTPQDGGWIGWMIKPLGRWSLVMEIDEGFAVGMSPAELSAEQLLSKLWLWEGKAES
                     YGWGSNSTQEAQFSVIDAITASELINDIEALFE"
     gene            1289..1531
                     /locus_tag="JQ356_003884"
     CDS             1289..1531
                     /locus_tag="JQ356_003884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005069643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HAY4623818.1"
                     /translation="MDKELPWLADNAQLELKYKKSKTPLSHRNWPGEPVSVITESIIQ
                     TLGDELLQKAEKKKRLSGVMKIFHWSGSPPSRRPST"
     gene            3055..4920
                     /locus_tag="JQ356_003885"
                     /pseudo
     CDS             3055..4920
                     /locus_tag="JQ356_003885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001343820.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4132 domain-containing protein"
     gene            4982..>5318
                     /locus_tag="JQ356_003886"
     CDS             4982..>5318
                     /locus_tag="JQ356_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623819.1"
                     /translation="MIVQKELVAIYDYEVPVPENPFSFRLEIHKCSELFTGSVYRLER
                     FRLRPTFHQRDREDVDPLINDALIYIRDEFIDERKLRGESPEPVPVIFNCELQNIFNQ
                     LIEYYFIKVG"
BASE COUNT         1370 a         1341 c         1365 g         1242 t
ORIGIN      
        1 tgaatttgtc tgggatctgt ttaccgcctg gctgactgcg ggcgcgccgt cgaaagagag
       61 ttgggcgttt actgcgttag gcgttctcgg taacgatgat accgctcgca aactgacgcc
      121 attaatccgc gcctggcctg gtgaatccca gcataaacgc gccaccgttg ggttggatat
      181 tctcgccgct atcggtagtg atattgccct gatgcagctt aacggcatcg cccagaaact
      241 taaattcaaa gcattacagg agcgggcaaa agaaaaaatt gccgacattg ccgagagccg
      301 cgaactcacg gtggcggagc ttgaagatcg gttagcaccg gatctcggtc tggatgataa
      361 cggttcgttg ctgctggatt tcggcccacg ccagttcacc gtcagctttg atgaaacctt
      421 aaaaccgttt gtgcgtgacg cttccggcag ccgcctgaaa gacctgccca aaccaaacaa
      481 aagcgatgat gaatcgcggt cgaacgatgc ggttaaccgc tacaaattgc tgaaaaaaga
      541 tgcgcgtatc gtcgccgccc agcaggtagc aaggcaggaa tccgccatgt gcctgcgtcg
      601 ccgctggtcg ccagaaaact ttaagctctt cctggttgag catccgttgg ttcgccactt
      661 aacccgccgt ctgatttggg gcgtttatag cgccgaaaac cagctacagg cgtgctttag
      721 ggtggcggaa gataacagct acagcaccgc tgacgatgat cttttcaccc tgccggaagg
      781 cggtatctct atcggcattc ctcacgttct ggaaatatca ccgacggatg ctgccgcctt
      841 tggtcagctt tttgccgact acgaactgct accaccattc cgtcagcttg accgtaacag
      901 ttacgccctg acaggagccg agcgcaacgc cagcgaactg acccgctggg caggcagaaa
      961 atgcccgagc ggtcgggtca tggggctggc gaataaaggc tggataaagg gcaccccgca
     1021 ggatggaggc tggatcggct ggatgatcaa acccctgggc cgctggtcgt tagtcatgga
     1081 aatcgatgaa ggttttgcgg taggcatgtc gccagccgaa ctcagcgctg agcagctctt
     1141 aagcaagctg tggctatggg aaggcaaagc agaaagctat ggctggggga gtaattcaac
     1201 acaggaagcg cagttctccg taatcgatgc catcaccgcc agcgagctaa ttaacgatat
     1261 tgaagccctg tttgaataag gaaagagcat ggacaaggaa ttaccgtggc tggcggataa
     1321 cgcccaactg gaactgaaat ataaaaaaag caaaacgccg ctcagtcatc gcaattggcc
     1381 gggcgaaccg gtgtctgtta tcactgaaag catcattcag acactgggtg atgaattgct
     1441 acaaaaagct gagaagaaaa aaagattgtc tggcgttatg aaaatttttc actggagtgg
     1501 cagtccgcca tcacgcaggc catcaacttg atcggcgaac acaaaccctc agtcccggcc
     1561 cggacaatgg cggcgctagc ctgtatcgcg caaaatgaca gccaacagtt gctcgacgaa
     1621 atcgtccaac aagaggggct ggaatatgcg actgaggtgg taattgcacg cctgtttatt
     1681 gcgcggtgtt atgagagtga tcctctggta gtgacattgc agtatcagga cgaggattat
     1741 ggctatggtt atcgctcaga aacctataac gaattcgatc tccgactgcg taagcatctc
     1801 tctctggcag aggaaagctg ctggcagcgt tgcgccgaca aactcattgc cgcactacca
     1861 ggaataacca aagttcgccg cccttttatt gcgctgatcc tcccggaaaa accagaaata
     1921 gccaatgagt tggtaggcct tgaatgcccg cgaactcatt ttcattctaa gaagtggtta
     1981 aaagttgttg ctaatgaccc cacagcggtg agaaaactcg aacactactg gagccaggat
     2041 atatttagcg atcgagaagc cagctacatg tcgcatgaaa accacttcgg ctacgcggcc
     2101 tgcgccgccc ttttgcgcga acaaggactg gcagccattc cgcgcctcgc gatgtatgcc
     2161 cataaagaag attgcggcag tctgctggta caaattaacc atccgcaagt catccgcacc
     2221 ttgctactgg tggctgataa aaacaaaccc agcctgcaac gtgtagctaa ataccataaa
     2281 aacttccccc atgcgacgct cgccgcactg gcagaactgc tggcgttaac agaaccacca
     2341 gcccgccctg gttatccaat catcgaagac aaaaagctgc ctgcacagca aaaagcacgc
     2401 gatgaatact ggcgtacgct gttacaaacg ctgatggcat cgcagccaca actggcagaa
     2461 gaggtgatgc agtggttaag tactcaagcc agggcagtgc tgaatagtta tttatcggca
     2521 ccgcccaaac cggttattga tagtaccgat aacagcaatc tgcctgaaat cctcgtttcg
     2581 ctaccgtggc gtagtaagaa aaaaatgaca gctccacgtc ttgatttggc accgctcgaa
     2641 ttaactccgc aagtttactg gcaaccaggc gaacaagaga ggcttgccgc cactgagtct
     2701 gcccgttatt tcagcacgga atctcttgcg caacgcatgg aacaaaaaag tggacgagtt
     2761 gtattacagg aactgggttt tggggatgat gtatggctgt ttctgaatta tatactcccc
     2821 ggaaaactgg atgctgcacg caattcactc attgttcagt ggcattacta ccaggggcgg
     2881 gttgaagaga tcctgaatgg ctggaactcc ccggaagcac aattagcaga acaggcgctc
     2941 cgcagcggtc acatagaagc gttaattaac atatgggaaa atgacaacta ctcacgttat
     3001 cgtccggaaa agagtgtctg gaacctgtat ttattggcac agttgccgcg tgagatggct
     3061 ttgaccttct ggctgcgtat caatgagaaa aagcatctgt tcgcgggtga ggactatttt
     3121 ctcagtatcc tcggattgga tgcgctacca ggtctgctgt tggctttttc acatcgtcca
     3181 aaagaaacat ttccgttaat tttaaatttt ggcgcaacag aactggcgct gcctgttgcc
     3241 cgcgtctggc gacgtttcgc ggcgcagcgt gatctggctc gccagtggat tttacaatgg
     3301 ccggaacata cggctagtgc acttatccct cttgtcttta ccaaacccag cgataatagc
     3361 gaagccgcat tacttgccct gcgtttactg tacgaacagg gacatggcga attgctacaa
     3421 accgtggcaa accgctggca gcgtacagat gtatggtctg ccctggagca gttgcttaaa
     3481 cagggtccaa tggacattta cccggcacgc attccaaaag cccctgattt ctggcatccg
     3541 gcaatgtggt ccaggcctcg acttatcact aataatcagc ctgttaccgg tgacgctctg
     3601 gaaattatcg gcgaaatgct gcgctttacc taggggggac gtttttatag cgggctggaa
     3661 caactgaaaa cgttctgcca gccacaaacg ctggccgctt ttgcctggga tctcttcact
     3721 gcctggcaac aagcgggggc ccccgcaaaa gacaactggg catttctggc attacgtctc
     3781 tttggtgacg aaagcacggc acgggatctg acgacacaga tcctcgcctg gccacaagaa
     3841 ggcaaatctg cccgtgctgt cagtggtctg aatatactta ccctgatgaa taatgatatg
     3901 gcgctgatgc agctgcatca tgtatcacaa cgggcgaaat cacgcccctt acgtgaaaac
     3961 gcagcggaat ttcttcaggt ggtcgcagaa aatcgcgggc taagccagga agagttagcg
     4021 gacagattag tcccaaccct gggccttgat gatccgcagg cgttgagttt tgattttggt
     4081 ccccggcagt ttaccgttcg cttcgatgaa aacctcaacc cggttatctt tgatcagcaa
     4141 aacgttcgcc agaaaagcgt tccccggttg cgcgccgatg acgatcaact gaaagcgccc
     4201 gaggcactgg cccgactaaa agggctaaaa aaagatgcta ctcaggtgag caaaaacctg
     4261 ctcccgcgtc ttgaagctgc cctacgtacc acccgacgct ggtcgctggc agattttcat
     4321 tctctgtttg ttaatcatcc ctttacccgt ctggttaccc agcgattaat atggggggtt
     4381 tatccggcaa atgaaccgcg ttgtttactc aaagcctttc gtgtggccgc agagggggag
     4441 ttctgcaatg cgcaagatga gccaattgac ctgcctgcgg acgctctgat tggcattgcc
     4501 cacccgttag aaatgacagt agaaatgcgc agtgaatttg cacagctttt tgccgattac
     4561 gaaattatgc cgccttttcg ccaattgtcg cgccgcacgg tgctgctcac acctgacgag
     4621 tcaaccagta acagcctgac tcgctgggaa ggtaaatccg ctaccgttgg gcagcttatg
     4681 ggaatgcgat acaaaggctg ggagtcaggt tatgaggacg catttgtcta tgacctgggt
     4741 gagtaccggc tggtccttaa gttttcaccc ggttttaacc actacaatgt tgatagcaaa
     4801 gcgctaatga gcttccgttc tcttcgagtg taccgtgaca ataaatccgt cacttttgcc
     4861 gaacttgatg tgtttgattt gagtgaggcg ttaagcgcac ctgacgtcat tttccattaa
     4921 aaacacagcg ggcagtgatg caactgcccg ttatcaacac gacttaccag cggggaaagc
     4981 gatgatcgtg caaaaagagc tggttgctat ttacgattat gaggtccctg tacctgaaaa
     5041 tccgttttcc ttcagacttg agatccataa atgctctgaa ttatttacag gttccgtcta
     5101 tcgactggaa cggttccggc tacgtccaac atttcatcaa cgtgatcgag aggatgttga
     5161 cccgctaata aatgatgcgt tgatttatat aagagatgag tttattgatg agcggaaatt
     5221 acgaggtgaa tcacctgaac ctgtaccagt aatttttaat tgtgaactac agaatatatt
     5281 caaccaacta atagaatatt actttattaa agtgggaa
//
LOCUS       DADKRT010000231         5208 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.236, whole genome shotgun sequence.
ACCESSION   DADKRT010000231 DADKRT010000000
VERSION     DADKRT010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5208
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.236"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..117
                     /locus_tag="JQ356_003887"
     CDS             <1..117
                     /locus_tag="JQ356_003887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HAY4623820.1"
                     /translation="DWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR"
     gene            complement(167..1915)
                     /locus_tag="JQ356_003888"
     CDS             complement(167..1915)
                     /locus_tag="JQ356_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIA"
                     /protein_id="HAY4623821.1"
                     /translation="MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFT
                     LNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDYRLLVLLLLNTFTPRAQLASALN
                     LPETWVAERLPRLKQRYERACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
                     GVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV
                     EQSGMFLGDNAVRTLTGLIEKQHQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENI
                     TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIG
                     LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE
                     IEPLLIINNSHYLLEDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS
                     FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWS
                     EQERRFRGFLITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEVI
                     AGLTGYEAFMELLHKG"
     gene            complement(1915..2985)
                     /locus_tag="JQ356_003889"
     CDS             complement(1915..2985)
                     /locus_tag="JQ356_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY4623822.1"
                     /translation="MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGS
                     FVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHK
                     GVKIPGVIGSVAPHALTEKQRQRPLSFDEMFIDIGANSRDEVEKRGVAMGDFISPEAN
                     FACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEH
                     IKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAH
                     NDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLI
                     RDFLTTLTAEKVNAFSQFRQMD"
     gene            complement(2975..4426)
                     /locus_tag="JQ356_003890"
     CDS             complement(2975..4426)
                     /locus_tag="JQ356_003890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIBC"
                     /protein_id="HAY4623823.1"
                     /translation="MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQG
                     SSGVENRLSSEEIAAADYVILATGRGLSGDDRARFTGKKVYEIAISQALKNIDQIFSE
                     LPTNSQLFAADSGVKLGKQEMQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFG
                     LPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLAND
                     KALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVL
                     TYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSL
                     LEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAI
                     PYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLA
                     IGLALNISFIIVLKGLWLRRKAKAAQQELVHEH"
     gene            complement(4437..4883)
                     /locus_tag="JQ356_003891"
     CDS             complement(4437..4883)
                     /locus_tag="JQ356_003891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HAY4623824.1"
                     /translation="MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQT
                     LLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGV
                     PQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS"
BASE COUNT         1318 a         1343 c         1316 g         1231 t
ORIGIN      
        1 gactgggata aagagcaact tcaggacgca aactcaagct ggatggtcga agactctttc
       61 ccgagagcat tacgcgagta caacgaaatg gttgatgact ataatagcct gcgttaaacg
      121 tttttgatga taaatgcagt gtcggatgcg gcgcatctga cacagttcac cccttgtgaa
      181 gtaactccat aaatgcctca tatcctgtta acccggcaat aacctctgcc ggatgctgac
      241 acaatatgct tgccagatag ctaaatattt ttagctcatg acgcgcatcg gcggcggcgc
      301 aggcgatcaa gacatggtta atgacttcgt tattcacctc aactggttgg gcgagggtaa
      361 taagaaatcc acgaaaacgt cgctcctgtt cgctccagca atgtgggatg gcgaggcgat
      421 taacaatcag gttttcacct tcgccttcgc gggcgatgat gcgttgtgct tcatcggcgg
      481 taatatggtg ttgtgcgact aattgcgcac aaatttgccg ggtaatatgt tgccagcttt
      541 caccgcgtac attcgaataa tgaaaacttc cgggggcaga gaaaaaacgc tccggttgct
      601 ggcgaataaa tgccgtcgcc agaaaatgtt ttatttgttc gataccggca gccgtaatga
      661 tattttttac ggtgatgtaa ttatttaccg cgtcttccag taaataatgg ctattgttaa
      721 tgatcaataa cggctcaatc tcttcgcgaa tggcaacaag ttcgcttaag ctacgggcaa
      781 taattacccg acaatttaaa acatcgcgct caatggcgag ctgattaata gtggcaatcg
      841 cgttctggtc cgagagcaaa atgatcggct ggcgttcgtt ttgatgccgc tccagcgcac
      901 aggcaaaata caaaccgatc agatcgctgt cgaaaagggg aatatcgagc tgttcacgca
      961 gtagcgtaat aaagtgcaga ctcatatcaa aggccgcagg ccaggctgct ttcaggttat
     1021 tcatgctact ttggcggtgc tcagcaatcc acaccggtgc ggcaaggcaa cgtaataaat
     1081 gcccggtaat attctcaacc aactgcgtat caataatatt caatgacgcg atgtctggca
     1141 ccctttgcag caaccccagc acatgatcgg ctgaaattac ctgcgcttgc tgatgctgtt
     1201 tctctatcaa acctgtcagg gttcttacag cgttatcacc aagaaacatg ccgctttgtt
     1261 caacgatttg ttttatctcg tcaccgggat attgcggcca ctcatcggtc agttgattac
     1321 gcagggcgta aatcgccaga atcaggctgg agagataatc accctgcatg agcggccagc
     1381 ggtgttggtt gtcgcaggcc gtggataaat gctgaaggtt gtctcgtgtt acgcccgcca
     1441 gcggaattaa aaacggatct ttgcgcagca agttcgccag caagataacg cgcttctctt
     1501 ctgtctcatc aatgaaatgg cccaaaccgg ggcggctggc caggcaacaa gcgcgttcat
     1561 aacgctgttt taaccggggc agacgctctg cgacccacgt ttctggcaaa ttaagcgccg
     1621 aggcgagttg cgcacgggga gtaaaggtat tcagtaataa cagtaccagc agccgatagt
     1681 cgttatcgtg cttttgcagc aactgaaaaa agctgcggcg ctcgaagatt tccagctgat
     1741 agcccgcact accactggcg gaaatgcggg ctttgccgtt aagggtaaag ttgagatagt
     1801 caatatcacg caggatggtc ctgcctgaaa cgccagtctg ttgcgccagc tcaccaggcg
     1861 tgcgcggctg ttgctccagc agatcgacaa tctttaactg gcgttcgttt agcattaatc
     1921 catctgacgg aactggctaa acgcgttgac tttctccgcg gttaaggtgg tcagaaaatc
     1981 ccgtatcaac gtgagcagag catcgtaatc ggcttttgaa atcataccgc tgttagcgtg
     2041 cagatagcgg gttggcaggc acagcgcaac aaccggacgc ccgccgccca tcacgttgta
     2101 gcgcccgcca tccgtcgcac cggttttcat ggtggaaaat tgcagcggta aatcgttatg
     2161 tgcggcacag ctttttaacg ctgctaccag tttctggttg gggaagtagc gcttgtcaaa
     2221 cagcatcagc cccggcccct ggcccagttt cagcgggtat ttaatgttat caatgcccgg
     2281 aacatcgcct gcgacagcgg tatccagcac gatcactaca tccggtttaa tgtgttccgc
     2341 cgaggtttgt gccccgcgta gcccaacttc ttcttccacg ctgccgacgc catacagcgt
     2401 aatttcggga ttattcaccg tctgcaatag ttcagccatc attgcgcagc cgatgcggtt
     2461 atccagcgcc ttgccgacca ctttatcttc gccccagcag gcaaaattgg cttccgggct
     2521 aataaaatcg cccatcgcca caccgcgttt ttccacctca tcgcgactgt ttgcgccaat
     2581 atcaatgaac atctcatcaa atgacagcgg ccgttgcctt tgcttttccg ttaacgcatg
     2641 aggcgcgacg gaaccaatca caccagggat tttcactccc ttgtgtgtgc gtatggttac
     2701 ccggtggttg agcatcgact gattccacca gccaccaatg gtggtgaaac gcagaaaacc
     2761 gctctcgtcg atgtgggtga ccataaagcc gacttcatcc atatgcccga caacggcaac
     2821 ttttggacct ttattcccct tacgggcaac aaagctgccc agaccatcaa aggtgatctc
     2881 attaacgcaa ggttccagcg tgtttatcag aatgtcgcga acttcctgtt catcgccgct
     2941 gacggcgctg gcttcgcaca actgttgcag taactcaatg ttcatggaca agctcctgtt
     3001 gcgcggcttt cgctttgcgg cgtaaccaca atcctttcag gacgataatg aatgaaatgt
     3061 tcagcgcgag gccaatcgcc agcaccagat aaaacgaacc caccggcgac atcaggccga
     3121 tcagcgggtc aaagataccc aaaccaggtg ccagacgttt gattccgaaa gcgatcacca
     3181 gcacgccggt aatgccaccc gccagcgtat tggcggtaat catcggcaac ggagctgcca
     3241 gagcgtaagg tatagccggt tcggttgcga ctgtggcacc gaccacaatg gcactactgg
     3301 cagcctcttt ttcctgtcgg gtaaacagtt tgggcgcaat gaacgtcgca agacccgccg
     3361 caacgggcgg catcaacgcg acaacgccga cgatggcgta ccagtcataa atgtgttttt
     3421 ccagcagtga gaagcagaag aaccaggcgg ttttattgat ggggccgccc atatcgaacg
     3481 ccagcatcgc accgaccaga aacgctgctg caaacttcat tgatggagga atggtattca
     3541 ggaagtggag cagcccgccc atgaggtcgg acatcaccgg cccgataacg tagtaagtga
     3601 gcacgccgaa aaccagcaga gtaacgaacg ggatcagcat tgaaccgagc agcggttgta
     3661 atgctttgcc aaggcgcact ttgcggaacc agaagacgaa atagccaatc gccagcccca
     3721 gcaccaccgc gccgaggaat cccgcacccg actgggtgcc gagcagcgct ttgtcgttcg
     3781 ccagatagca aaccagaaac gccggagcga aagccggttt atcggcaatc gacgaggcaa
     3841 tataagcgcc catgatgggg atcataaagg tgaagccaag gtaaccgatg gattcaacta
     3901 cccaggtaaa cgacggcgcg cctttcgaca tatcggtata cggcaaaccg aactgcacca
     3961 gcatgttggc aagcgccacc aggataccac cgccgatgac aaacggcagc gccgcagaga
     4021 cgcccgccat caggtggctc atcacgctgc cgctttgcat ttcctgtttg ccaagcttca
     4081 cgccactatc tgcggcaaaa agctgcgagt ttgtcggtaa ttcgctgaaa atctggtcga
     4141 tatttttcaa cgcctgggag atggcaatct cataaacttt cttcccggta aaccgcgcgc
     4201 gatcatcacc gctcaggcca cgcccggtag cgagaatgac gtaatcggca gcggcaatct
     4261 cttcgctgga taagcggttt tcaacgccac tggacccttg agtttccact tttatggtat
     4321 ggccgagaga acgggctttc tgttccaggg cttccgccac catgtaggtg tgagcgatcc
     4381 cggcggggca gttggtgatc gcgacaatac gtaaggatga ctccatcgcc acttccttat
     4441 gagctgaggg tttgatttaa caaggcaagc acttggtcgg tatcgccctg ttgcagttga
     4501 tgaataaatt ccttgtgaat aattttgcga cacagtgtgc cgatgatttt gacctgatcc
     4561 tcttcgccgc tttgcggcac gccgaggcag atccagcaat tgacgtcttc gccatcgctg
     4621 gctttccagt caatagcctg cgctttgcgg gcgaataata cgaacggttg tttaacgcag
     4681 gcgcttttac cgtgcggcac ggcgacaccg gaaccaaatc cagtagagtg cattttttcg
     4741 cgcagcagca gggtttgcag gaactggtgt gagtcggtga taaaaccgtt ttgtaacgct
     4801 attgtcgcca actgcttcag aacggaataa gcgccattgc cctgaatatt caggtcaata
     4861 cagcttgcag taagagctgc cattaatcgg actccataaa atatatttta atcaattgta
     4921 atggtggagc gattaagtga tgagaggcga tatgtcggta aacaatgaca atttgagaca
     4981 gagtgaaagg tcagatttgc ggagtaatgc acataatggt tatttaaata aaccacatga
     5041 atcattaatg ggttattcat tatttttgtg atttactcac aatgtatcag ggaaatataa
     5101 cttaccggga gatgtaatat gtttaatttt tcaaatcgaa atttaaaata ttgtgccgga
     5161 ggcatctccg gcacattggg caattacggc aggtaaaaca cttcttgc
//
LOCUS       DADKRT010000232         5199 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.237, whole genome shotgun sequence.
ACCESSION   DADKRT010000232 DADKRT010000000
VERSION     DADKRT010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5199
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.237"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            259..1674
                     /gene="gltX"
                     /locus_tag="JQ356_003892"
     CDS             259..1674
                     /gene="gltX"
                     /locus_tag="JQ356_003892"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HAY4623825.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
                     ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
                     APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
                     FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
                     RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR
                     DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGR
                     TRSIERINKALAFIAERENQQ"
     gene            complement(1725..2096)
                     /locus_tag="JQ356_003893"
     CDS             complement(1725..2096)
                     /locus_tag="JQ356_003893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY4623826.1"
                     /translation="MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV
                     DTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGVRAPAYRQIINAIDNMTDIEQEKVA
                     QFLSREGIRNFLARLDIDESA"
     gene            complement(2119..2463)
                     /locus_tag="JQ356_003894"
     CDS             complement(2119..2463)
                     /locus_tag="JQ356_003894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY4623827.1"
                     /translation="MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHV
                     NEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII
                     GLLQRLGIRDSK"
     gene            2699..2774
                     /locus_tag="JQ356_003895"
     tRNA            2699..2774
                     /locus_tag="JQ356_003895"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2732..2734,aa:Ala,seq:ggc)
     gene            2983..5172
                     /locus_tag="JQ356_003896"
     CDS             2983..5172
                     /locus_tag="JQ356_003896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HAY4623828.1"
                     /translation="MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL
                     AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA
                     ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA
                     DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS
                     WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN
                     YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL
                     PNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK
                     LYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET
                     LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA
                     QPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH
                     PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM
                     YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS
                     ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD"
BASE COUNT         1215 a         1239 c         1324 g         1421 t
ORIGIN      
        1 ccgctgtgtg gagtcgcatt atagggagag ttcaaaatga gtcaacgcat tttctaaaga
       61 aattgttcgt tcgtcgtaaa tttaagcaag atgatcgcaa aatagaccgt gttgcgcaat
      121 ttgtcaacga aaacaataat gcgtaaggta gaaacccgaa ctacattgag gaatcaggcg
      181 ggagtgatag aatatcgccc actcaatttt tccaggattt gccggttgtc ggcatctttc
      241 taaacgtaag gccatttcat gaaaatcaaa actcgcttcg cgccaagccc aacaggctat
      301 ctgcacgttg gcggcgcgcg tactgccctt tactcctggc tttttgcacg taaccacggc
      361 ggtgagttcg tgctgcgtat tgaagacacc gatcttgagc gttccacgcc ggaagctatc
      421 gaagccatta tggatggcat gaactggctg agcctggagt gggatgaagg tccgtactac
      481 cagaccaaac gttttgatcg ctacaacgcg gtgatcgatc agatgctgga agagggcact
      541 gcttataaat gctattgctc taaagagcgc ctggaagcgc tgcgcgaaga gcaaatggcg
      601 aaaggtgaga agccgcgtta tgacggtcgc tgccgccaca gccatgagca tcacgctgat
      661 gatgaaccgt gcgttgtacg ttttgctaac ccgcaggaag gttctgttgt ttttgacgat
      721 cagatccgtg gtccgatcga gttcagcaac caggaactgg acgatcttat tattcgccgt
      781 accgatggtt ccccaaccta taacttctgt gtggttgtcg atgactggga tatggaaatc
      841 acccacgtta tccgtggcga agaccatatc aacaacacgc cacgccagat caacattctt
      901 aaggccctga aagcgccggt gccggtttac gcgcacgttt ctatgatcaa cggcgatgac
      961 ggtaaaaaac tgtccaaacg tcacggggcg gtcagcgtaa tgcagtatcg tgatgacggt
     1021 tatttgccag aagcactgct gaactatctg gtgcgtctgg gctggtccca cggcgatcag
     1081 gaaatcttca ctcgtgaaga gatgatcaaa tacttcaccc tgaatgccgt cagcaaatct
     1141 gccagtgcgt tcaacaccga caagctgctg tggctgaacc atcactacat taacgcgctg
     1201 ccgccggagt atgttgctac tcacttacag tggcacattg agcaggaaaa tatcgatacc
     1261 cgtaacggcc cgcagctggc tgatctggtg aaactgctgg gcgaacgctg caagacgctg
     1321 aaagagatgg cacagagctg ccgttatttc tacgaagatt ttgctgagtt cgatgccgac
     1381 gccgcgaaaa aacatctgcg tccggtagcg cgtcagccgc tggaagtggt tcgtgacaaa
     1441 ctggccgcga ttactgactg gaccgctgaa aacgttcatc acgctattca ggcgacggcg
     1501 gatgagctgg aagtgggtat gggtaaagtt ggtatgccgc tgcgtgtcgc cgtaaccggt
     1561 gcggggcagt ctccggcact ggatgttacc gttcacgcaa ttggtaggac ccgcagtatt
     1621 gagcgtatca acaaagcgct ggcttttatt gctgaacgcg aaaaccagca gtaattagcg
     1681 cataaaagat aaacggcagg agataatatc ctgccgtttt ttatttatgc tgattcgtca
     1741 atatcgagac gggcgaggaa attgcgaatt ccttcacgtg acaaaaattg cgcgactttt
     1801 tcctgctcaa tgtctgtcat attatctatc gcgttgatga tttgtcgata cgccggggcg
     1861 cgtactccag gagcgtattc agcaattctc tcttcagctt ccatcaacat tggtgtgtta
     1921 tggaaggctg gcgtgttctg aataaactcg caaacttgcg tatcgaccag aataagtctg
     1981 gcacgaccgc ctttcacgcc gggaaatttt tccgttttcc agcctttttc tctgatccaa
     2041 cggttaacag tttgtttagc cacaccgagg cattcagcca gttcttcggt ggtcatttta
     2101 ttgcgtaatc ttttcatatt atttgctatc gcgaatccct aagcgttgta acaatccgat
     2161 aatcccttcc cgcagaagca aggatgtaaa ctgtttttgt tcaactggcg tcatctcttt
     2221 cgccagtgtc accagcaata cttcaagcgg cgcatcacca gaaagggcag gcgcttctcc
     2281 ctgaccttct ggacgttcag cattgcgaat atattcacga acctgttcat tgacgtgaac
     2341 cagtcgggct ttgccaccct ggacgccagg ttttggtgac gttgtccagc cttccttgcg
     2401 tacccattta ttaatggtct ggcggctata gccggtcagt ctggcaagtt catctggtgt
     2461 catcctctcc ttgaacataa caattccctg aatgtatgtg ggtctattag tagttcattt
     2521 tataacacca ctttacagga aaccgtgaca tgaataacta ctgaatgcga gcggttttcc
     2581 aaaattgttc atttgcctga tttttcagcg attgaaacta cacgttgcaa tttgccgttg
     2641 acacattcgg gcggaattca tatgatgccg cccgtcaact cgacaagctt tacgtgacgg
     2701 ggctatagct cagctgggag agcgcttgca tggcatgcaa gaggtcagcg gttcgatccc
     2761 gcttagctcc accaaatttc caaccctcgc tgcaaagcgg gggttttttg tctctgcttt
     2821 ttgccgcttt tgtaatacag tctacgtccg ggttagtgcc gcctggtgaa agcatcattg
     2881 gatgaaaaat cggcaacagg ctggccccct gtttgcttcg cgatgcgaat aaacttatta
     2941 tttgtgtgcc tgaaaactcc gatcagtgag agtagtgtac tcatgtttgt ggagcataac
     3001 ctgataaaaa atatcaagat attcacacta gcgtttacgc tcaccgtggt acttattcag
     3061 ctatcccgtt ttatttcgcc acttgccatt atccattcca gttatatctt tctggcgtgg
     3121 atgccactgt gcgtaatgct gtcaatcttg tttatctttg gctggcgagg tgtcgttccc
     3181 gttttatgcg ggatgttttg caccaatctg tggaactttc atctctcttt tttacagact
     3241 gcggtcatgc tcggtagcca gacgtttgtc gtgttgtgtg cctgcgcaat attacgctgg
     3301 cagctgggga cgcgttggcg ttatggattg accagccgat atgtctggca acgtctgttc
     3361 tggcttggtt tggtgacgcc gatcggcatc aaatgcagca tgtatcttgt ggggagcttc
     3421 tttgatttcc cgctaaagat atccaccttt ttcggcgatg cggatgccat tttcacggtc
     3481 gttgatttgc taagcctttt caccgctgtg ctgatttaca acatgctttt ctactatctc
     3541 actcgcatga ttgtaagtcc ccactttgcg cagatattgt ggcgcaggga tatcgcgccg
     3601 tcgttgggca aagagaaacg cgcatttacc ttaagctggc tggcagcgtt aagcgtgctt
     3661 ctacttctgt tgtgcacacc ttatgaaaac gactttattg ccggttacct ggtacccgtt
     3721 ttcttcatca tctttaccct cggggtcggt aagcttcgct atccgttttt aaatctcacc
     3781 tgggctgttt caacgctttg ccttctgaat tacaaccaga actttttgca aggggtggaa
     3841 accgaatatt cgctggcatt tattcttgcg gtgctgattt cctttagcgt ttgcctgctc
     3901 tatatggtgc gcatttatca tcgcagtgaa tggcttaatc gccgctggca tttgcaggcg
     3961 ctgaccgatc cgttaacgct cctgcccaac ttccgtgcgt tggaacaagc gccggagcaa
     4021 gaggcgggca agagtttttg ctgcctgcgc attgataatc ttgagtttat gagtcgtcat
     4081 tacggcttaa tgatgcgcgt tcactgtatc cgctcaattt gccgtacgct gctgccgttg
     4141 atgcaggaaa acgaaaagtt gtatcaattg ccgggtagtg aactgctgtt agtgctgagc
     4201 gggccggaaa cggaagggcg actccagcat atggttaaca tcctgaatag tcggcaaatt
     4261 cactggaaca ataccgggct ggatatgggc tatggtgctg cctgggggcg ttttgatgga
     4321 aatcaggaaa ccctgcaacc cttgttgggg cagttaagct ggctggcgga gcaatcctgc
     4381 gcacatcatc atgtgctggc gctggatagc agagaggaga tggtttccgg gcagaccact
     4441 aaacaggtgc tattgctgaa taccattcgc acggcgttag atcagggtga tttgctgctc
     4501 tacgcccagc caattcgcaa caaagagggt gaaggttatg atgagatcct cgcgcgactg
     4561 aaatatgacg gcggcattat gaccccggat aagtttctgc cccttattgc tcagtttaac
     4621 cttagcgcgc gttttgattt gcaagtgctg gaatccttgt tgaagtggct ggcaacacac
     4681 ccttgcgaca aaaaaggacc gcgcttttca gtcaatttaa tgccgctcac gctgctgcaa
     4741 aagaatattg ccgggcggat tattcgtctg tttaagcgtt atcacatctc cccgcaggcg
     4801 gtcattcttg agatcaccga ggagcaggcg ttttctaacg cagaaagcag catgtacaac
     4861 atcgagcagc tgcataagtt tggtttccgg attgcgattg atgactttgg caccggctat
     4921 gccaactacg aacggttaaa gcgtttgcag gctgatatca tcaaaattga tggcgtcttt
     4981 gtgaaagata ttgtcacgaa cacgctggat gcgatgattg tgagatcaat taccgatctg
     5041 gcgaaagcga agtcattgag tgtggtcgcg gagtttgtcg agacgcaaca gcagcaggcg
     5101 ctattgcata agctcggggt gcaatatctg caagggtatt tgattggtcg cccgcagcca
     5161 ttagctgatt aacaggcgta aaaaaaacgg ggaattatc
//
LOCUS       DADKRT010000233         5189 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.238, whole genome shotgun sequence.
ACCESSION   DADKRT010000233 DADKRT010000000
VERSION     DADKRT010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5189
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.238"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            148..264
                     /locus_tag="JQ356_003897"
     CDS             148..264
                     /locus_tag="JQ356_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004996477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY4623829.1"
                     /translation="MPGIPPEIRWNNQKNALQLWNKEGGVVRREGDPLEMAQ"
     gene            628..1470
                     /locus_tag="JQ356_003898"
     CDS             628..1470
                     /locus_tag="JQ356_003898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY4623830.1"
                     /translation="MLNEGGILFKANHVPVLMYHHVSHCPGLVTLSPVTFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLKEFNLKAHIFLIT
                     GFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSKHLCWPEGYYNKDYIQVAEELG
                     FYYLYTTERRMNAPAKGTTRIGRISTKERESCAWLKRRLFYYTTPFFSSLLAFHKGPR
                     LPDD"
     gene            1473..2561
                     /gene="capU"
                     /locus_tag="JQ356_003899"
     CDS             1473..2561
                     /gene="capU"
                     /locus_tag="JQ356_003899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HAY4623831.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKLGIDITFALFRNSLHIPTAWRLLGIVHGFQPNAIVCHSGHDSNIVGLVRLFTW
                     KHPFRIIRQKTYLTQKTKVFSINHFCDEVIVPGTSMKTHLEQEGCRTRVTVVPPGFDF
                     QKLYVDSRNSLPPNVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGM
                     VLAEASAFSVPVLASQIGGIPDVIQNNQTGTLLPAGNKHAWMCALNDFFNDPGRFYQM
                     ARQAKQDIEERFDINKTALKILTLAKHK"
     gene            2566..3516
                     /gene="virK"
                     /locus_tag="JQ356_003900"
     CDS             2566..3516
                     /gene="virK"
                     /locus_tag="JQ356_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY4623832.1"
                     /translation="MFSVSNLSFIGFLKRIVFSSDSLPGKWEHRKFRFMYILRCAINP
                     VASIRYYYELRSLPCIEDILAIHPTLPARIHRPYLHKGGRAWTRGQYILEHYRFVQNL
                     PEKYSKFLFPQKSVSLVQFIGKDGENFDIQCSSSGFDREGELMLSLFYNKTVITRLTF
                     SVILTQNGHIAFIGGLQGAPKNTGPDVIRCATRACYGIFPKRIIFEAFCALMKACNIS
                     ECLAVSEHSHVFRQLRYWYQKRKTFVAVYSDFWESVAGKTCGDWYRLPTQVIRKPLSD
                     IASKKRSEYRKRYALLDYIHETTIRSLDAYPVHSEHQDLN"
     gene            3581..4525
                     /gene="lpxM"
                     /locus_tag="JQ356_003901"
                     /gene_synonym="msbB"
     CDS             3581..4525
                     /gene="lpxM"
                     /locus_tag="JQ356_003901"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY4623833.1"
                     /translation="MKKYKSEFIPEFKKNYLSPVYWSTWFLLGMIAGISMFPPSFRDP
                     VLAKIGRWAGRLSKKARRRATINLSLCFPEKSDTEREIIVDKMFATALQSIVMMAELA
                     IRGPEKFQKRVFWKGLEILEEIRYNNRNVIFLVPHGWSVDIPAMLLAAQGEKMAAMFH
                     QQRNPVIDYVWNSVRRKFGGRLHSREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFA
                     DFFATYKATLPIIGRLMNISQAMIIPLFPVYDEKKHFLTIEVRPPMDACIASADNKMI
                     ARQMNKTVEILVGSHPEQYIWVLKLLKTRKSNEADPYP"
     gene            complement(4679..>5189)
                     /locus_tag="JQ356_003902"
     CDS             complement(4679..>5189)
                     /locus_tag="JQ356_003902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY4623834.1"
                     /translation="HQVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGA
                     LHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLK
                     ENPKFRVIYQPVYSPWVNHAERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFP
                     GGKHGLAKV"
BASE COUNT         1444 a         1016 c         1194 g         1535 t
ORIGIN      
        1 tatcggtggc aatagcctgt gcaaattttt tataacccgg gatcgtgtca ggattcagag
       61 tatgataaag acagattttc atggctgccg gtttccgtcg tgcaaaaaac atgctgattt
      121 tacgaaggaa tgccttactg aacaaccttg cccggaatac cccccgaaat cagatggaac
      181 aatcagaaaa atgctctgca gttatggaat aaagaaggtg gggtggtacg ccgggagggc
      241 gatccgctgg aaatggcgca gtagctgcag gcctgtcatg atgccggaat agaagttcgt
      301 gtacaggtta atgaaagcgt caccccgtaa ataaactctg cgctgaaatt cctttttttc
      361 attggagcac ctgtgttgtt ctgaggtgaa catatcacct ctgttcaggt agccaaattc
      421 agtgtgccac ctcaaggttc ttagtgagtc gtttttaaaa gatatgataa tatatcattg
      481 tttatgaatt gttgatgttt aatttagtaa aatatatcaa gtatgccatg ggtttgctat
      541 gttattcatc cagtatctgg aaataaaatg caccagcttt attgggtttt ccttttgtct
      601 ctgcttacta ggtgccagaa actttaaatg ttaaacgaag ggggcatttt gttcaaagcc
      661 aatcatgttc cggtattaat gtatcatcat gtcagtcatt gccccggact ggttacactt
      721 tctcccgtga cattccggaa gcaaatgaaa tggttggctg aaaataactg gaaaacactg
      781 tcatcagatg aactggagtt tttttatcgg ggcggaaaac tcccccggaa aagcgttatg
      841 ttgacatttg atgatggata ccttgacaac tggtttcagg tatatccttt attaaaagag
      901 tttaatctca aagcacatat ttttttaatt accggtttta ttgggaatgg tccggttcgt
      961 cactctcctg gaaaggaata ttctcatcgc gattgcgaac atcaaatagc gacagggaat
     1021 gctgataatg ttatgcttcg ctggtctgaa gtaaacgaaa tgttgcaatc tggtctggtc
     1081 gaatttcatg ttcatacgca tactcataca cgctgggata aaaagttcag ttcacgagaa
     1141 gaacagtgta aacatcttcg gcaggacttg ttgagtggga gagaatattt gaaagaaatg
     1201 acaggaaaat gcagtaaaca tttgtgttgg ccggaaggtt attataacaa ggattatatt
     1261 caggtcgctg aagaacttgg attctattat ttatatacaa cagaaagaag aatgaatgct
     1321 cctgctaaag gaactacacg gataggaaga ataagcacca aagaacggga aagttgcgca
     1381 tggctgaaaa gacgactttt ttattataca acaccgtttt tttcatcgtt gctggccttt
     1441 cataaggggc caagattacc ggatgattaa taatgaatat actatttacg gaatcatcac
     1501 cgaatatagg tggtcaggaa ttacaggctg ttgctcaaat gaaggccctg aagaaaatgg
     1561 ggcattcagt tctgcttgtc tgcagggaaa acagcaaaat tgcttttgaa gccagtaaat
     1621 tgggaattga tatcacattc gcgttatttc gaaacagtct tcacatccct actgcatgga
     1681 gattactcgg aatagttcat ggttttcagc ccaatgcaat cgtttgtcac agtgggcatg
     1741 atagcaatat tgttggttta gtacggttat tcacttggaa acatccattc agaattatca
     1801 ggcaaaagac atatttgaca caaaaaacaa aagttttttc aataaatcat ttttgcgatg
     1861 aggtgattgt tcccggaaca agtatgaaga cacatctgga gcaggaagga tgtcgaaccc
     1921 gggttactgt tgtgcctcca ggctttgatt tccagaaatt atacgttgat tcccgaaaca
     1981 gtttgcctcc aaatgttctt tcttggctgg cgtcccgaag gggatgcccc gttattgctc
     2041 aggtaggaat gttgcgcccg gaaaaagggc acgaatttat gttgaattta ctgttccatt
     2101 taaaaatgaa tggacgacag ttctgttggt tgattgtggg gtctggttcg cctgaactgc
     2161 gggagcattt acagtatcag attgacagta tgggcatgca tgatgatgtt tttattgctg
     2221 acaatgtttt tcctgccgcc cccgtatatc gggttgccag tctggtggtt ctgccttcag
     2281 aaaacgaatc gtttggtatg gtactggcag aagcatcggc attttctgtg cctgtactgg
     2341 ccagtcagat tggtggaatc cctgatgtta ttcagaacaa ccagaccggg acattgttac
     2401 cagcaggtaa taagcacgca tggatgtgcg ccctgaatga tttttttaat gaccctgggc
     2461 gtttttatca gatggctcgc caggcaaaac aggatataga agagcggttt gatattaata
     2521 aaactgcgtt aaaaatactc acattagcga agcacaagta acaatatgtt ttctgtaagt
     2581 aacttatcat ttatcggttt ccttaaaagg attgtttttt cctcagattc actcccgggg
     2641 aagtgggaac acagaaaatt ccggttcatg tacattttgc gatgtgctat aaatccggtt
     2701 gccagtattc gatattatta cgaactgcgt tccttgccgt gcattgagga tattctggca
     2761 atacacccca cgttgccagc aagaattcat cgcccttatt tgcataaagg ggggcgcgcc
     2821 tggacccgtg gacaatatat tcttgagcat tatcgctttg tgcaaaattt gccagaaaaa
     2881 tattctaaat ttttgtttcc acaaaaatcg gtatcattag tccaattcat cgggaaagat
     2941 ggagagaatt ttgatatcca gtgttcttcc agtggttttg accgggaagg agagttgatg
     3001 ttgtcattgt tttacaataa aacagttatt acccggttaa cattttcagt cattctgact
     3061 caaaatggac acattgcttt tattggcgga ttacagggag cccctaaaaa taccggacct
     3121 gatgttattc ggtgcgcaac ccgggcctgt tatgggattt tcccaaaacg gattattttt
     3181 gaagcatttt gtgcgttgat gaaagcttgc aatatctctg agtgtctggc agtcagtgag
     3241 cacagtcatg ttttccggca attgagatac tggtatcaga aacgcaaaac ctttgttgcg
     3301 gtctatagtg atttctggga gtctgtagca ggaaaaacct gtggtgactg gtacagatta
     3361 ccaacccagg tgattcgaaa gccgctaagc gatatagcca gtaaaaaacg ctctgagtac
     3421 cgaaaacgat acgctttgct ggattatatc catgaaacta ctatccgctc tttggatgca
     3481 tatcctgtac actcagaaca tcaggattta aattaaggtt tgatgtattc tctgaataaa
     3541 acagtaatga taattttggt agaggcattc gcactaaata atgaaaaaat ataaatctga
     3601 gtttattcct gaatttaaga aaaattatct ttcccctgtt tactggtcta catggttcct
     3661 tttgggaatg attgcaggta tttcaatgtt tcccccttca ttcagagatc ctgtcttggc
     3721 aaaaataggg cgttgggcgg gcagattgag caaaaaagct cgtcgcaggg cgacgattaa
     3781 tttatcgctt tgtttcccag aaaagagtga tacagaacgg gaaataattg tcgacaaaat
     3841 gtttgccaca gcattgcaat ccatagtgat gatggcagaa ctggcaattc gtggtccgga
     3901 aaagttccag aaacgagtgt tctggaaagg cctcgaaatt cttgaggaaa ttcgatacaa
     3961 taacagaaat gtgatttttc tggttcccca tggctggagc gtggatattc ctgcaatgtt
     4021 gctggcagct cagggggaaa aaatggccgc catgtttcat cagcaacgaa atccagtgat
     4081 tgattatgtc tggaattctg tacggcgtaa attcgggggg cgcttacatt cccgggagga
     4141 tgggataaaa ccatttattc agtcagtacg ccagggatac tgggggtatt accttccaga
     4201 tcaggatcat ggtcctgaat acagtgaatt tgctgatttt tttgcgacct ataaagcgac
     4261 attaccaatt attggacgtc tgatgaacat cagtcaggct atgattatac cgcttttccc
     4321 ggtttatgat gaaaaaaaac atttcctgac tattgaagtt cggccaccaa tggatgcatg
     4381 cattgccagc gcggacaata aaatgattgc ccgacaaatg aacaaaacag tggaaatttt
     4441 ggtggggtca catccggaac agtatatctg ggttttaaaa ttgttaaaaa cgcgcaaatc
     4501 aaacgaagcg gacccgtacc cttgaaatta taaagtacag gtatttccac tagttgtttc
     4561 ttacaggtta ccaatcgaaa cacatccccc ttccgtgtgt tgcccgtttg gcacggagga
     4621 ctgtgtagat gcagttcgtt aaatttaatt tatgcctaaa tagctgcgct taataccgct
     4681 acacttttgc cagtccatgt ttgcctccgg ggaatgggct gacggtttcc ataaaatggc
     4741 gaactttttt caacagttgc cacattgagc ggcactgatg attacgcgtt attgtgtcgt
     4801 gaagtgcctg ccatagccgt tcagcatgat tcacccatgg cgagtaaacc ggctgataaa
     4861 tgaccctgaa cttcgggttc tccttcagcc agctctgtgt ttcccggctt ttgtggataa
     4921 tgtagttgtc cacgatcagc gtgatggttt tcgcccgacg gtatgtcgct ttaagccgct
     4981 tcagcaggct gatgaacagc gccgaacttt tgctgttgcc gcccacatag ctgactttac
     5041 ctgtcccgct gtgcagcgct ccggccagat aatatttttc attctgtccc ggcgtgacca
     5101 cccgtttttg ctgtccgcgc agttgccagt ccgcaccgat tttgggatga agatggatat
     5161 ccacttcatc ttcataaaag acctgatgt
//
LOCUS       DADKRT010000234         4960 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.239, whole genome shotgun sequence.
ACCESSION   DADKRT010000234 DADKRT010000000
VERSION     DADKRT010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4960
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.239"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..247)
                     /locus_tag="JQ356_003903"
     CDS             complement(<1..247)
                     /locus_tag="JQ356_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3029 family protein"
                     /protein_id="HAY4623835.1"
                     /translation="MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQL
                     PAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLAN"
     gene            505..1284
                     /gene="deoC"
                     /locus_tag="JQ356_003904"
     CDS             505..1284
                     /gene="deoC"
                     /locus_tag="JQ356_003904"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HAY4623836.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQTKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVD
                     VVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIK
                     AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI
                     ADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY"
     gene            1411..2733
                     /gene="deoA"
                     /locus_tag="JQ356_003905"
     CDS             1411..2733
                     /gene="deoA"
                     /locus_tag="JQ356_003905"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313368.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HAY4623837.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYL
                     PTAMLTKAVYADTEGFVSEMDARALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQ
                     VDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE"
     gene            2785..4008
                     /gene="deoB"
                     /locus_tag="JQ356_003906"
     CDS             2785..4008
                     /gene="deoB"
                     /locus_tag="JQ356_003906"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY4623838.1"
                     /translation="MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGH
                     WEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMS
                     LLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLA
                     KYFGTSDMEYGKAMF"
     gene            4088..4807
                     /gene="deoD"
                     /locus_tag="JQ356_003907"
     CDS             4088..4807
                     /gene="deoD"
                     /locus_tag="JQ356_003907"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HAY4623839.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLF
                     YSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
BASE COUNT         1192 a         1265 c         1364 g         1139 t
ORIGIN      
        1 cgttcgccag aaaacgggcg taatcgggta agacatagcg cggtttgtac ggcgcatgac
       61 cttcaaacat atcgcagatt acaccctcat ccagcgcgcg gcgggcttcg gcaggaagct
      121 gcggataagg cagattgttt tctgcttcca gagccagaaa atggcgcttc tgctccgggc
      181 taagcactgg gctggtgaca atttgctggc aacgttgttg cagtgcattt tcatgagaag
      241 tgggcatctt cttttccttt tatgccgaag gtgatgcgcc attgtaagaa gtttcgtgat
      301 gttcactttg atcctgatgc gtttgccacc actgacgcat tcatttgaaa gtgaattatt
      361 tgaaccagat cgcattacag tgatgcaaac ttgtaagtag atttccttaa ttgtgatgta
      421 tatcgaagtg tgttgcggag tagatgttag aatactaaca aactcgcaag gtgaatttta
      481 ttggcgacaa gccaggagaa tgacatgact gatctgaaag caagcagcct gcgtgcactg
      541 aaattgatgg acctgaccac cctgaatgac gacgacaccg acgagaaagt aattgctctg
      601 tgtcatcaga ccaaaactcc ggtcggcaat accgccgcta tctgtatcta tcctcgcttt
      661 atcccgattg ctcgcaaaac gctgaaagag cagggcaccc cggaaatccg aatcgctacg
      721 gtaaccaact tcccacacgg taacgatgac atcgaaatcg cgctggcaga aacccgtgcg
      781 gcaatcgcct acggtgctga tgaagttgac gttgtgttcc cgtaccgcgc gctgatggcg
      841 ggtaacgagc aggttggttt tgacctggtg aaagcctgta aagaggcttg cgcggcagcg
      901 aatgtactgc tgaaagtgat catcgaaacc ggcgaactga aagacgaagc gctgatccgt
      961 aaagcgtctg aaatctccat caaagcgggt gctgacttca tcaaaacctc taccggtaaa
     1021 gtggcagtga acgcgacgcc ggaaagcgcg cgcatcatga tggaagtgat ccgtgatatg
     1081 ggcgtagaaa aaaccgttgg tttcaaaccg gcgggcggcg tgcgtactgc ggaagatgcg
     1141 cagaaatatc tcgccatcgc agatgaactg ttcggtgctg actgggcaga tgcgcgtcac
     1201 taccgctttg gtgcttccag cctgctggca agcctgttga aagcgctggg ccacggtgac
     1261 ggtaagagcg ccagcagcta ctaagcaaga tgctttacgc ctgatgcgct gcgcttatca
     1321 ggcctacgag acgtatctac ccgtaggccg gataaggcgt agacgcatcc ggcaaaagcc
     1381 gcctcatact cttttcctcg ggaggttacc ttgtttctcg cacaagaaat tattcgtaaa
     1441 aaacgtgatg gtcatgcgct gagcgatgaa gaaattcgtt tctttatcaa cggcattcgc
     1501 gacaacacta tctccgaagg gcagattgcc gccctcgcga tgaccatttt cttccacgat
     1561 atgacaatgc ctgagcgtgt ctcgctgacc atggcgatgc gagattcagg aaccgttctc
     1621 gactggaaaa gcctgcatct gaatggcccg attgttgata aacattccac cggcggcgtc
     1681 ggcgatgtca cttcgctgat gttggggccg atggtcgcag cctgcggcgg ctatattccg
     1741 atgatctccg gtcgcggcct cggtcatact ggcggtacgc tcgacaaact ggaatccatc
     1801 cctggcttcg acattttccc ggatgacaac cgtttccgcg aaattattaa agacgtcggc
     1861 gtggcgatta tcggtcagac cagctcactg gctccggcgg ataaacgttt ctacgcgacc
     1921 cgtgatatta ccgcaaccgt ggactccatc ccgctgatca ctgcctcgat cctggcgaag
     1981 aaactggcgg aaggtctgga tgcgctggtg atggacgtga aagtgggtag cggcgcgttt
     2041 atgccgacct acgaactctc tgaagccctt gccgaagcga ttgttggcgt ggctaacggc
     2101 gctggcgtgc gcaccaccgc gctgctcacc gacatgaatc aggtactggc ctccagtgca
     2161 ggtaacgcgg ttgaagttcg tgaagcggtg cagttcctga cgggtgaata tcgtaacccg
     2221 cgtctgtttg atgtcacgat ggcgctgtgc gtggagatgc tgatctccgg caaactggcg
     2281 aaagatgacg ccgaagcgcg cgcgaaattg caggcggtgc tggacaacgg taaagcggca
     2341 gaagtctttg gtcgtatggt agcggcacaa aaaggcccga ccgacttcgt tgagaactac
     2401 gcgaagtatc tgccgacagc gatgctgacg aaagcagtct atgctgatac cgaaggtttt
     2461 gtcagtgaaa tggatgcccg cgcgctgggg atggcagtgg ttgcaatggg cggcggtcgt
     2521 cgtcaggcat ctgacaccat cgattacagc gtcggcttta ctgatatggc gcgtctgggc
     2581 gaccaagtag acggtcagcg tccgctggcg gttatccacg cgaaagacga aaacagctgg
     2641 caggaagcgg cgaaagcggt gaaagcggca attaaacttg ccgataaagc accggaaagc
     2701 acaccaactg tctatcgccg tatcagcgaa taacggtata ctgatctgat catttaaatt
     2761 tgaagcactg agtacggaga acatatgaaa cgtgcattta ttatggtgct ggactcattc
     2821 ggcatcggcg ctacagaaga tgcagaacgc tttggtgacg tcggggctga caccctgggt
     2881 catatcgcag aagcttgtgc caaaggcgaa gctgataacg gtcgtaaagg cccgctcaat
     2941 ctgccaaatc tgacccgtct ggggctggcg aaagcacacg aaggttctac cggtttcatt
     3001 ccggcgggaa tggacggcaa cgctgaagtt atcggcgcgt acgcatgggc gcacgaaatg
     3061 tcatccggta aagatacccc gtctggtcac tgggaaatcg ccggtgtccc ggttctgttt
     3121 gagtggggat acttctccga tcacgaaaac agcttcccgc aagagctgct ggataaactg
     3181 gtcgaacgcg ctaatctgcc gggttacctc ggtaactgcc actcttccgg tacggtcatt
     3241 ctggatcagc tgggcgaaga gcacatgaaa accggcaagc cgattttcta tacctccgct
     3301 gactccgtgt tccagattgc ctgccacgaa gaaacctttg gcctggataa actctacgaa
     3361 ctgtgcgaaa tcgcccgtga agagctgacc aacggcggct acaacatcgg tcgtgttatc
     3421 gctcgtccgt ttatcggtga caaagccggt aacttccagc gtaccggtaa ccgtcacgac
     3481 ctggctgttg agccgccagc accgaccgtg ctgcagaaac tggttgatga aaaacacggt
     3541 caggtggttt ctgtcggtaa aattgcagac atctacgcca actgcggtat caccaagaaa
     3601 gtgaaagcaa ctggcctgga cgcgctgttt gacgccacca tcaaagagat gaaagaagcg
     3661 ggtgataaca ccatcgtctt caccaacttc gttgacttcg actcttcctg gggccaccgt
     3721 cgcgacgtcg ccggttatgc tgcgggtctg gagctgttcg accgccgtct gccggagctg
     3781 atgtctttgc tgcgcgatga cgacatcctg atcctcactg ctgaccacgg ttgtgatccg
     3841 acctggaccg gtactgacca cacgcgtgaa cacattccgg tactggttta cggcccgaaa
     3901 gtaaaaccgg gttcactggg tcaccgtgaa accttcgcgg atatcggcca gactctggca
     3961 aaatattttg gtacttctga tatggaatat ggcaaagcca tgttctgata atgggtgcgg
     4021 cttgatgccc tcaccccggc cctctcccac agggagaggg tgaaaacatg ttgataagga
     4081 taaaacaatg gctaccccac acattaatgc agaaatgggc gatttcgctg acgtagtttt
     4141 gatgccaggc gacccgctgc gtgcgaagta tattgctgaa actttccttg aagatgcccg
     4201 tgaagtgaac aacgttcgcg gtatgctggg cttcaccggt acttacaaag gccgcaaaat
     4261 ttccgtaatg ggtcacggta tgggtatccc gtcctgctcc atctacacca aagaactgat
     4321 caccgatttc ggcgtgaaga aaattatccg cgtgggttcc tgtggcgcag ttctgccgca
     4381 cgtaaaactg cgcgacgtcg ttatcggtat gggtgcctgc accgattcca aagttaaccg
     4441 catccgtttt aaagatcatg actttgccgc tatcgctgac tttgacatgg tgcgtaacgc
     4501 ggtagacgcg gctaaagcac tgggcattga tgctcgcgtt ggtaacctgt tctccgctga
     4561 cctgttctac tctccggacg gcgaaatgtt cgacgtgatg gaaaaatacg gcatcctcgg
     4621 cgtggaaatg gaagcggctg gtatctacgg cgtcgctgca gaatttggcg cgaaagccct
     4681 gaccatctgt accgtgtctg accacatccg cactcacgag cagaccactg ccgctgagcg
     4741 ccagaccacc ttcaacgaca tgatcaaaat cgcactggaa tccgttctgc tgggcgataa
     4801 agagtaattg tgtttcgctg aaaggcgatt gtcgtgtgaa gccggagtgg gagactgctc
     4861 cggcttttta gtatctattc atcaatagca actgatttat agatttacta ttatttttca
     4921 tatggataga aaataaaatc tattcaagta tctattcacg
//
LOCUS       DADKRT010000235         4871 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.240, whole genome shotgun sequence.
ACCESSION   DADKRT010000235 DADKRT010000000
VERSION     DADKRT010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4871
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.240"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            298..1272
                     /gene="hemB"
                     /locus_tag="JQ356_003908"
     CDS             298..1272
                     /gene="hemB"
                     /locus_tag="JQ356_003908"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HAY4623840.1"
                     /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY
                     KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD
                     FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY
                     AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR"
     gene            complement(1378..2229)
                     /gene="tauD"
                     /locus_tag="JQ356_003909"
     CDS             complement(1378..2229)
                     /gene="tauD"
                     /locus_tag="JQ356_003909"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HAY4623841.1"
                     /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
                     VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
                     TFIETPPAGAILAAKELPSTGGDTLWTSGITAYEALSVPFRQLLSGLRAEHDFRKSFP
                     EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES
                     EALLGFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRVTILGD
                     KPFYRAG"
     gene            complement(2244..3053)
                     /gene="tauC"
                     /locus_tag="JQ356_003910"
     CDS             complement(2244..3053)
                     /gene="tauC"
                     /locus_tag="JQ356_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter permease TauC"
                     /protein_id="HAY4623842.1"
                     /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
                     QLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
                     IAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
                     ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
                     LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTP"
     gene            complement(3050..3817)
                     /gene="tauB"
                     /locus_tag="JQ356_003911"
     CDS             complement(3050..3817)
                     /gene="tauB"
                     /locus_tag="JQ356_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter ATP-binding subunit"
                     /protein_id="HAY4623843.1"
                     /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
                     NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK
                     MQRLEIAHQVLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD
                     AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA
                     RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS"
     gene            complement(3830..4792)
                     /gene="tauA"
                     /locus_tag="JQ356_003912"
     CDS             complement(3830..4792)
                     /gene="tauA"
                     /locus_tag="JQ356_003912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4623844.1"
                     /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNT
                     FAKESGASVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASQL
                     GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPA
                     IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHP
                     EVVKAFAKSAIDAQQPYIANPDAWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ
                     QQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ"
BASE COUNT         1144 a         1407 c         1232 g         1088 t
ORIGIN      
        1 acgcgttata aatatcaaaa acacaaacca gataaatatc ttatcaatat acaacaaagt
       61 ttgaattatt caatttatag cagcacaacc aaacgcaaaa aaaaataata accaagagct
      121 ataaataaag attaaaaata ttttcagtga atatgaactt attgctattt ctattacaaa
      181 gatgtcctgg tctctctttc attctcttct tgtcaacatc acgacaactt tcgtaaaaca
      241 ctcctgcccc gcttcaggta tactgtgcac cttaattcca caaacatcag gcagaccatg
      301 acagacttaa tccaacgccc tcgtcgcctg cgcaaatctc ctgcgctgcg cgctatgttt
      361 gaagagacaa cacttagcct taacgacctg gtgttgccga tctttgttga agaagaaatt
      421 gacgactaca aagccgttga agccatgcca ggcgtgatgc gcattccaga gaaacatctg
      481 gcacgcgaaa ttgaacgcat cgccaacgcc ggtattcgtt ccgtgatgac tttcggcatc
      541 tctcaccata ccgatgaaac cggcagcgac gcctggcggg aagatggact ggtggcgcgt
      601 atgtcgcgca tctgcaagca gactgtgcca gaaatgatcg tcatgtcaga cacttgtttc
      661 tgtgaataca cttctcacgg tcactgcggt gtgctgtgcg agcatggcgt cgacaacgac
      721 gcgactctgg aaaatttagg caagcaagcc gtggttgcag ctgctgcagg cgcagacttc
      781 atcgcccctt ccgccgcgat ggacggccag gtacaggcga ttcgtcaggc gctggacgct
      841 gcaggcttta aagatacggc gattatgtcg tattcgacca agttcgcctc ttccttttat
      901 ggcccgttcc gtgaagctgc cggaagcgca ttaaaaggcg accgcaaaag ctatcagatg
      961 aaccctatga accgtcgcga ggcgattcgt gagtcactgc tggatgaagc ccagggcgca
     1021 gactgcctga tggttaaacc tgctggagcg tacctcgaca tcgtgcgtga gctgcgtgaa
     1081 cgtactgaat tgccgattgg cgcgtatcag gtgagcggtg agtacgcgat gattaagttc
     1141 gccgcgctgg cgggtgctat agatgaagag aaagtcgtgc tcgaaagctt aggttcaatt
     1201 aagcgtgcgg gtgcggatct gattttcagc tactttgcgc tggatttggc tgagaagaag
     1261 attctgcgtt aatttttttc ctctcagaaa gggggagtta acctgttgaa agtacggtga
     1321 acgccccctc accctaaccc tctccccaag ggggcgaggg aaccgtccgc actcgtatca
     1381 ccccgcccga taaaacggtt tatccccaag aatcgtcacc cgatgcataa tccgccgctg
     1441 tggcaggtaa tcggcattgg catagtgctg agtcacgcgg ttatcccaaa tcgcaatatc
     1501 attcggttgc cagcgccaac gcacctgaaa ctccggttta gtgatatggg cgaataaaaa
     1561 gcctaacaag gcttcgctct ctttctcgct gacatcgaca attcgcgtag taaagccttc
     1621 attcacaaac agcgcctgtt taccgctcac cggatgcgtt cgcaccaccg gatgtagcaa
     1681 cggaggattt ttcgcgaccg cctcgcgcca gcgttgatgt tcctcctcgg ttttgcggta
     1741 tttgtattcc gggaacgatt tacggaaatc atgctccgca cgcagcccgc tcagcagctg
     1801 gcggaaggga acagagagcg cctcataggc cgtaataccg ctggtccaga gcgtatcacc
     1861 gccggtcgaa ggtaattctt tagctgccag aatcgcccct gcgggtggcg tttcaataaa
     1921 tgtcacatcg gtatgccagt tgtcgttatc tggcggatta tcgttatggg tatccagcac
     1981 gatgatctcg tcaacccctt cggcatgagg gtaaacaggg tgaatatgca gttcgccaaa
     2041 acgctgggcc agcgcgcgtt gctgctgcgg cgtaatggct tgatcgcgca gaaacaccac
     2101 ctgatggcgc agcaccgcat ggtaaagctg ttcaaactga ttatcgctta acgggcgcgt
     2161 caggtcggca cccgaaattt gtgcgccgat atacggcccc agcggggtaa tgctcagacg
     2221 ttcactcatt gtacttctcc atgctagggc gtcagacggc gctgtaacgc gcgcaaaccc
     2281 agttctaaaa gaaaggcgat aatcgcaatc accgcgattc ccgccagcac cacgtcagtc
     2341 gcgagaaatt cacccgctga ctgaaccata aatcctaaac cgcgcgtcgc ggcaatcagc
     2401 tccgccgcta ccagcgtaga ccagcccaca cccagaccaa tgcgtaatcc ggtgaggatt
     2461 tccggcagcg cgccgggcaa aatgacaaac cacagcacct gcgcacggct ggcacccagc
     2521 gactgggcgg cacgaatgcg aacctgctgc gcgcttttca cccccgccag cgccgacatc
     2581 gccaccggtg caaaaatcgc taaatagatc agtaagatct tcgaggtttc accaatacca
     2641 aaccagatca ccatcagcgg caaataagcc agcggcgaca ccggacgata aagttcgatt
     2701 accggatcca gaatgccgcg caccgtcggg cttagcccca tggcgatccc gaccggaata
     2761 ccgatcacca ccgccgcgag tagcgccagc acaatgcgcg tcaggctggc tgccagatgc
     2821 tgccacagcg tggcgtccat aaatccctgc ggtccggcaa tggtgagcag ttttgccagt
     2881 acttgttgcg gcggcggcaa aaacagcggg ctaatcagtt gcagcgccgc caccgtccac
     2941 catacagtga gtaaaaccgc taacgtgcca atgcttaagg tcacctgacg cgagagcggc
     3001 cagcgccatt tcagccgccg cgaatgcagt ttttcattaa tgagcacact catgagaacg
     3061 cctcccgttg ctcaaatacg cggcttaaaa catattcgcg catggcgatg aattgtggat
     3121 cggacttgat gctgcggctc gactctcccg caacaaagcg gcgagcaaag ttgagcggca
     3181 gccgctccag cacacggcca gggccggatg aaagcagaac cagttcagtc gccataaaca
     3241 ccgcttcttc tatatcgtgg gtaatcaaca gcacctgctt gcccgtctcc tgccagagtt
     3301 tcagcagcag agtttgcatc tggtcgcggg tgaaggcgtc cagcgcacca aacggttcgt
     3361 cgagtaataa cagctgggga ttcgccgcca gcgcgcgggc aatccccacc cgctgacgtt
     3421 gaccaccgga aagctgccag atatagcgtt tttctgcgcc ttccagcccc acttttttca
     3481 gcacctggtg cgcgatttcc agtcgctgca ttttctctat acctgccaat tgcaggccga
     3541 acgccacgtt gtcctgtaca ttgcgccacg gtagcagccc ttcattctga aaaaccaccc
     3601 cgcgctctgc tcccggtccc tcaatacgct tacccgccag ttgaatgctg ccatgctgat
     3661 aaggcacaaa accggcaatc agattcagca acgtggtttt accgcagccg gacggcccca
     3721 gcaccaccag tagctcgccg ctttccagcg tcaggttgat atcttccagt gccggtttgc
     3781 cgccataatc ggcatagaga tgagagattt gcagcatctg cgcctccttt tattgcacga
     3841 agcgcgaggt aacgtactgg ctgtaatcat tcgctacagc cgggaccttg ccctgctctt
     3901 tcaaaaactg cgcggtgtcg atgattactt tgttcaccgg tccggtcagt tctgccgttt
     3961 gttgctgcgg cgtcagatag gtattcccct taaccagccc cggaacgtca ccttccggca
     4021 cgccgcttaa acgcgccagt ttgctgatgt tttccggctg tttcagccac gcgtctgggt
     4081 tagcaatgta cggttgctga gcatcgatgg cgcttttagc gaacgctttc acgacctcag
     4141 gatgtttctc ggcaaaatct ttgcgcacca cccagacgtc cagcgttggc gcaccccact
     4201 gcccgacctg ttcagaatcg gtcaacacct tgccgtcttt ttccagggcg ttaaccgccg
     4261 gtgcccagac ataagcacca tcaatatcac cccgctgcca tgcggcgata atcgcgggcg
     4321 gctgcaggtt cacaatctcc acttgcccta gtttaatccc ccagtgtttc agcgccgcca
     4381 gcaggctgta gtgggtggtg gagataaacg gtacggcaat gcgtttgcca atcaaatctt
     4441 cgggtttgct gatagttttc tttaccacca gcgcttcgga gttacccagt tgtgacgcca
     4501 gcaagaagac ttcaatcggc acctgttggc tggctgcaac cgctaatggg ctggaaccga
     4561 ggttgccgat ttgcacgtcg ccagaagcca gcgcccgcac gatgctggct ccgctgtcaa
     4621 acttacgcca gtccacgctc gccccgctct ctttagcaaa ggtgttgccg gcctgagcca
     4681 ctttcgccgg ttcggctgag gtttgatacg ccacggtgac gttcaccgcc tgtgcctgaa
     4741 aagcgatgaa tgccagtgcg gcaagaagtg tgttacgcga tgaaattgcc atgattgtct
     4801 gctccccagt cttgttatgg gagcagtatt caggaataaa aacattcatt aaaagaatta
     4861 gtcgttatcg c
//
LOCUS       DADKRT010000236         4853 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.241, whole genome shotgun sequence.
ACCESSION   DADKRT010000236 DADKRT010000000
VERSION     DADKRT010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4853
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.241"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..1250)
                     /locus_tag="JQ356_003913"
     CDS             complement(<1..1250)
                     /locus_tag="JQ356_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid carrier protein"
                     /protein_id="HAY4623845.1"
                     /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG
                     KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITTGGPRAVFWMWVAAFIG
                     MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG
                     VQANAVARALSFSFDFPPLVTGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLT
                     SMVICVINIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG
                     STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQ
                     LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNTPKAIWCLRIC
                     TFATVIGGTLLSLPLMWQLADIIMA"
     gene            1529..2482
                     /gene="tal"
                     /locus_tag="JQ356_003914"
     CDS             1529..2482
                     /gene="tal"
                     /locus_tag="JQ356_003914"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY4623846.1"
                     /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
                     ETVVMGASFRNIGEILELAGCDRLTIAPTLLKELAESEGAIERKLSYTGEVKARPARI
                     TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
     gene            2597..3184
                     /gene="mog"
                     /locus_tag="JQ356_003915"
     CDS             2597..3184
                     /gene="mog"
                     /locus_tag="JQ356_003915"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HAY4623847.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSVLTTPFELET
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
                     MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFA
                     SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
     gene            complement(3219..3785)
                     /gene="satP"
                     /locus_tag="JQ356_003916"
     CDS             complement(3219..3785)
                     /gene="satP"
                     /locus_tag="JQ356_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HAY4623848.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
                     YSGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
                     LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
                     GASAIYLAMGEVLNEQFGRTVLPIGESH"
     gene            complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="JQ356_003917"
     CDS             complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="JQ356_003917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HAY4623849.1"
                     /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM
                     RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
                     KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAFDARVNELEELLPLLMKDKL
                     LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT
                     IPAVLQIACLRRMVSATQV"
     gene            complement(4673..>4853)
                     /locus_tag="JQ356_003918"
     CDS             complement(4673..>4853)
                     /locus_tag="JQ356_003918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HAY4623850.1"
                     /translation="ARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT
                     VNSSDMATLKIIGDD"
BASE COUNT         1275 a         1249 c         1230 g         1099 t
ORIGIN      
        1 gccattatga tatctgccag ttgccacatc agcggaaggc ttagcaaggt gccgccgatg
       61 accgttgcga aggtgcagat ccgcaaacac cagatcgctt taggggtgtt caggcgtaaa
      121 aagaagagat tgttttcggc ataaatgtag ttggcaacga tggagctgaa ggcaaacaga
      181 ataaccacga gggtaacaaa ctcagcaccc caggaaccca ttagcacccg catcgccttc
      241 tggataagct gaataccttc cagcggcatg taggttgtgt cgttacccgc cagtaatatc
      301 agcatggcgc ttgccgtaca gatgaccagg gtgtcgataa aaatgccaat catctggaca
      361 atcccttgcg ctgccggatg cggaggccag gacgccgctg ccgctgccgc gtttggcgtc
      421 gaacccattc ccgcctcatt ggaaaacata ctgcgctgaa aaccgttagt aatcgcctgg
      481 cttaaggtat atcccgccgc gccgcctgcc gcttcctgcc agccaaaagc actctcaaaa
      541 atagaccaaa tgacgtgggg aagttgcccg atatttatta cgcaaatcac catgctggtc
      601 agcacccaga ttatcgccat caacgggaca aacccctgca tgagccgggc gacgccatga
      661 agaccgcgag tgattgccag cagagcaaag acagcgagaa taatgcctgt caccagcggg
      721 ggaaaatcaa aagaaaaact cagggctcgg gcaacggcgt tcgcctgaac tccgctgaaa
      781 attatgccgt aggcgatgag caaaaagacg gcgaacagaa cgcccatcca acgcatcccc
      841 agcccgcgcg ccatatacca tgccggtccg ccacgaaact gcccattgac gtcacgttct
      901 ttataaagtt gtgcaaggga acattcggca aacgaggtcg ccatgccgat aaacgcggca
      961 acccacatcc aaaagacggc tctaggtcca ccggtggtaa tagccagcgc aacgccggcc
     1021 aggttgccgc tacccacgcg cgccgcaaga ctggtacaca atgactgaaa tgaggttaaa
     1081 ccgcctggct gtggatgaat gctattttta agacttttgc caaactggcg gatgtagcga
     1141 aactgcacaa atccggtgcg aaaagtgaac caacaacctg cgccgaagag caggtaaatc
     1201 attaccgatc cccaaaggac gctgttaata aaggagaaaa aatctggcat gcatatccct
     1261 cttattgccg gtcgcgatga ctttcctgtg taaacgttac caattgttta agaagtatat
     1321 acgctacgag gtacttgata acttctgcgt agcatacatg aggttttgta taaaaatggc
     1381 gggcgatatc aacgcagtgt cagaaatccg aaacagtctc gcctggcgat aaccgtcttg
     1441 tcggcggttg cgctgacgtt gcgtcgtgat atcatcaggg cagaccggtt acatccccct
     1501 aacaagctgt ttaaagagaa atactatcat gacggacaaa ttgacctccc ttcgtcagta
     1561 caccaccgta gtggccgaca ctggggacat cgcggcaatg aagctgtatc aaccgcagga
     1621 tgccacaacc aacccttctc tcattcttaa cgcagcgcag attccggaat accgtaagtt
     1681 gattgatgat gctgtcgcct gggcgaaaca gcagagcaac gatcgcgcgc agcagatcgt
     1741 ggacgcgacc gacaaactgg cagtaaatat tggtctggaa atcctgaaac tggttccggg
     1801 tcgtatctca actgaagttg atgcgcgtct ttcctatgac accgaagcgt caattgcgaa
     1861 agcaaaacgc ctgatcaaac tctacaacga tgctggtatt agcaacgatc gtattctgat
     1921 caaactggct tctacctggc agggtatccg tgctgcagaa cagctggaaa aagaaggcat
     1981 caactgtaac ctgaccctgc tgttctcctt cgctcaggct cgtgcttgtg cggaagcagg
     2041 cgtgttcctg atctcgccat ttgttggccg tattcttgac tggtacaaag cgaatactga
     2101 taagaaagag tacgctccgg cagaagatcc gggcgtggtt tctgtatctg aaatctacca
     2161 gtactacaaa gagcacggtt atgaaaccgt ggttatgggc gcaagcttcc gtaacatcgg
     2221 cgaaattctg gaactggcag gctgcgaccg tcttaccatc gcacctacac tgctgaaaga
     2281 gctggctgag agcgaagggg ctatcgaacg taaactgtct tacaccggcg aagtgaaagc
     2341 gcgtccggcg cgtatcactg agtccgagtt cctgtggcag cacaaccagg atccaatggc
     2401 agtagataaa ctggcggaag gtatccgtaa gtttgctatt gaccaggaaa aactggaaaa
     2461 aatgatcggc gatctgctgt aatcattctt agcgtgaccg ggaagtcggt cacgctacct
     2521 cttctgaagc ctgtctgtca ctcccttcgc agtgtatcat tctgtttaac gagactgttt
     2581 aaacggaaaa atcttgatga atactttacg tattggctta gtttccatct ctgatcgcgc
     2641 atccagcggc gtttatcagg ataaaggcat ccctgcgctg gaagaatggc tgacatcggt
     2701 gctaaccacg ccgtttgaac tggaaacccg cttaatcccc gatgagcagg cgatcatcga
     2761 gcaaacgttg tgtgagctag tggatgaaat gagttgccat ctggtgctca ccacgggcgg
     2821 aactggcccg gcgcgtcgtg acgtaacgcc cgatgcgacg ctggcagtag cggaccgcga
     2881 gatgcctggc tttggtgaac agatgcgcca gataagcctg cattttgtac caactgcgat
     2941 cctttcgcgt caggttggtg tgattcgcaa acaggcgctg atccttaact tacccggtca
     3001 gccgaagtct attaaagaga cgctggaagg tgtgaaggac gctgcgggta acgttgtggt
     3061 acacggtatt tttgccagcg taccgtactg cattcagttg ctggaagggc catacgttga
     3121 aacggcacca gaagtggttg ctgcattcag accgaagagt gcaagacgcg acgttagcga
     3181 ataaaaaaat ccccccgagc ggggggatct caaaacaatt agtgggattc accaatcggc
     3241 agaacggtgc gaccaaactg ctcgttcagt acttcaccca tcgccagata gattgcactg
     3301 gcaccacaga tcagaccaat ccagccggca aagtggatga ttgcggcgtt accggcaatg
     3361 ttaccgatcg ccagcagggc aaacagcaca gtcaggctaa agaaaacgaa ttgcagaacg
     3421 cgtgcgcctt tcagcgtgcc gaagaacata aacagcgtaa atacgcccca cagacccagg
     3481 tagacaccaa ggaactgtgc atttggcgca tcggtcagac ccagtttcgg catcagcaga
     3541 atcgcaacca gcgtcagcca gaaagaaccg taagaggtga atgcggttaa accgaaagtg
     3601 ttgccttttt tgtactccag cagaccagca aaaatttgcg cgatgccgct gtagaaaatg
     3661 cccatggcaa gaataatacc gtccagagcg aaataaccca cgttgtgcag gttaagcaga
     3721 atggtggtca tgccgaagcc catcaggccc agcggtgccg gattagccaa cttagtgttg
     3781 cccataattc ctcaaaaatc atcatcgaat gaatggtgaa ataatttccc tgaataactg
     3841 tagtgttttc agggcgcggc ataataatca gccagtgggg cagtgtctac gatcttttga
     3901 ggggaaaatg aaaattttcc ccggtttccg gtatcagacc tgagtggcgc taaccatccg
     3961 gcgcaggcag gcgatttgca gtacggctgg aatcgtcacg cgataggcgc tgccgctgac
     4021 cgctttaacc ccatttagtg ccgcacctac agggcctccc agccccgcgc cgcgcagcaa
     4081 accatgccca agtacgctca ttgctgcgtg ggtgcgtaaa atgcgggtca gttggctgga
     4141 aagcaaatgc gacacgcctt ttgccaataa tttgtctttc atcagcagcg gcagcagctc
     4201 ttccagctca ttcaccctcg catcgaacgc gtgcagaaac tcctgcttat gttcctcgtc
     4261 cattttcttc caggtattac gcagaaattg ttccagtaac tgttgctcaa tttcaaacgt
     4321 agacatctct ttgtcggctt tcagcttcaa tcgttttgaa acatcgagca aaatggcccg
     4381 atacaattta ccgtgtccgc gcagtttgtt ggcgatacta tcgccaccaa aatgctgtaa
     4441 ttctccagca atcagctgcc agttgcggcg atgttgctcg ggatgccctt ccatcgattt
     4501 aaacagttcg ttgcgcatca gtacgctgga gaggcgagtt ttgccttttt cattatgggt
     4561 gagcaatcgg gcgaaatttg ccaactgttc ctcactacaa tgctgaagaa aatccagatc
     4621 tgaatcattc aggtaattaa cattcatttt ttgtggcttc tatattctgg cgttagtcgt
     4681 cgccgataat tttcagcgtg gccatatccg atgagttcac cgtatgaccg gaaaaggtga
     4741 tttttgagac gcagcgttta ttgtcgttat cactgttaat gttgatccag tcagtggttt
     4801 gcccttcttt tatttctgaa ggaatattca gactctgact ggcgctacgg gcg
//
LOCUS       DADKRT010000237         4729 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.242, whole genome shotgun sequence.
ACCESSION   DADKRT010000237 DADKRT010000000
VERSION     DADKRT010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.242"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..801)
                     /locus_tag="JQ356_003919"
     CDS             complement(<1..801)
                     /locus_tag="JQ356_003919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY4623851.1"
                     /translation="MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEW
                     LYGRDPERLQRGERSGGLGGSNLTTPEWFNSIHTLFPQQVIERLESDAVLRYGIEDVV
                     TNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFS
                     GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLV
                     LLVDQSGSMVDSVIPSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVAD"
     gene            complement(794..3073)
                     /locus_tag="JQ356_003920"
     CDS             complement(794..3073)
                     /locus_tag="JQ356_003920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623852.1"
                     /translation="MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRV
                     DELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDL
                     PCWAQSEEVDDSPDTQEESQALLLRATRMDNSDTLWDHLFEDESQQIALPSALAHYFA
                     QLRGDFPGDALNRQREAFMARWIAWAVQRNNGDVLVVCGGWHAPALAKMWRECPQEIN
                     KPELPSLANAVTGCYLTPYSEKHLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKT
                     VLTRLRQHNLPASIADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPL
                     PWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAE
                     LTLNRFTPDGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEEHWKLTRPLSQHAAL
                     IEAACFGATLQEAARHKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLI
                     AQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCAAIDRTLWLCESNGRPDEK
                     EFHAHLHSWQALCHILRDLHSGVNLSGVSLSAAVALLERRSQAIHAPALDRGAALGAL
                     MRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLS
                     DANFINALPDLRAVMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHH
                     QQLEQQALASLQHWGVFHV"
     gene            complement(3084..4172)
                     /locus_tag="JQ356_003921"
     CDS             complement(3084..4172)
                     /locus_tag="JQ356_003921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310954.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HAY4623853.1"
                     /translation="MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAAR
                     AFILGDSAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISG
                     DAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITR
                     TPLEVQDCLLGMLSDRVMTVPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKR
                     RFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEK
                     KTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVDCIAGTIVKDNEEDRAR
                     LRRYFEQRVATHKEAHWQAYYQARHRLP"
BASE COUNT         1103 a         1252 c         1293 g         1081 t
ORIGIN      
        1 atcggcaacg tctgccgtga gatcaacgac gcttgtgtca aacgccacca gatgggtacg
       61 aatgccgggt aactgccaca aacaggccgc catcaccgca gaggggatca ccgaatcgac
      121 catcgagccg ctttgatcaa ccagtaagac cagttgccat tgttcgcttt ggcgtttaat
      181 gcggctgtta aagcgggggg attcgatata caacttgccg tgttgcgggt gccagtgttg
      241 caggttggcg cgcagagtac ttttgaaatc aaagtttcgc gccagtggaa taaatgagcg
      301 gcgacggcga tcgcggacac cagaaaaagc ctgacgaact tcctttgcca gtcgcgccat
      361 aatttcttca acaacctggc gcacaatcct gcgggcggca gccagtactt cggggttcat
      421 cagatgtttg gtgtgcaaaa cggcgcgtag caggctttcg gaaggctgca tacgttccag
      481 cacgtcgaga tttgtcacca catcttcaat gccgtagcgc agtacggcat cgctttccag
      541 ccgctcaatc acctgttgcg gaaacagcgt gtggatactg ttgaaccact caggagtggt
      601 gagatttgag ccacctaatc caccagagcg ttcaccacgc tggagccgtt caggatcgcg
      661 cccatacagc cactccagcg cgtgatctat ctgccgggcg ttgtcatcca gcccacaaag
      721 cgtcgtttct gccgcttcgc caagaattaa tcgccagcgt tgtagctcac gggtggtcag
      781 aagatcgttc agttcagaca tggaaaactc cccagtgttg cagcgatgcc agtgcctgct
      841 gttcgagttg ttgatgatgt gcaatggctt gcggtggaca atgcaacggc atttgcagtg
      901 ccgaaacggg aagttgcgcc agttgataat gctcaagcac ctgatgcgcc agcgtcccgc
      961 gttctcgtgg cggtagccag gccatcaccg cgcgtaaatc gggcagggca ttgataaaat
     1021 tggcatcact cagttgattc aaatggctgc tgaaaccggc gataaatgca ggttgacagg
     1081 ccagttgatg acgggctaat gccagcaaac cgtgcagcgc ctcgccggat tgtgccgggg
     1141 ataactgcgc cagcatcgtc agcgccgctt cggcactggc gttgggatgt tccagacgca
     1201 ttagtgcgcc aagagccgcg ccgcgatcca gcgccggggc atgaatcgcc tgactgcgtc
     1261 gctccagtaa ggctaccgcc gcagaaagcg aaacgccgga taaattaacg ccgctatgta
     1321 gatcgcgcag aatatggcaa agcgcttgcc agctatgcag gtgagcgtga aactcctttt
     1381 catccggtct gccgttagat tcacacagcc acagcgtgcg atcgatagcc gcgcataacg
     1441 tcgtttgtaa tatctgcgcg ccttgcatac cgctaatttc atccagccgc cataaggcat
     1501 atagcacttc cagcgcctgg cccatttcgg caaattgatt ttcctgggcg attaataatg
     1561 tgagttgctc cagtaattgt tgactgaagg acgccagacc cgctaacgcc gcctggctaa
     1621 gacatgtggt gatactgccg atgccacccg cgtccagcat atcggcttct aatttatggc
     1681 gtgcggcttc ctgaagtgtt gcaccaaagc atgcggcctc aatcaatgcc gcatgctggc
     1741 taagcgggcg ggttaatttc cagtgttctt caccgttgcc tgcaagtgtc agtgtacttc
     1801 cctgctggcg tacaatccca gggatctcca gtattgccag ccgatgtaac acctgacttt
     1861 gcgccagccc atcgggggta aagcgattta aggtaagctc cgccggaaga gagattgcgg
     1921 tacgttccag ttcgcaggtg acatcttttg gcagaggcgg ttgtggcgtg gaaggggcaa
     1981 gtttaccgaa tccgtcaccc gctaatgtgt ctatcaacgt tagcagaatc ggatcggtat
     2041 cgggatgaat aacgccgcga tagctccacg gcaacggtgc attcagggct tctttaatca
     2101 gcgagcctgc tatggcatcc agccagtcag tgcgtaacgg tagtgtatga ccgcgcaact
     2161 gtgccagtgc cattgcatgc agatgtgcgg cagccatatc cgcgatcgaa gcaggcaagt
     2221 tgtgctggcg caaacgggtg agaaccgttt ttagcagttg ttcaccggcc tgctgtaagc
     2281 cccactgcca gcaccagttt tgccagaccg gggcaggcat accggaaagg tatcctgcca
     2341 gcacatcaag gtgcttttca ctgtaggggg tgagataaca acctgtaacg gcatttgcca
     2401 gcgagggcaa ttctggcttg ttaatttcct gcggacattc gcgccacatt tttgccagtg
     2461 caggagcgtg ccagccaccg cagacgacta acacgtcgcc attatttcgc tgcaccgccc
     2521 atgcaatcca gcgagccata aaggcttcgc gctgacgatt gagtgcatcg ccggggaaat
     2581 cgccccgcag ttgggcaaaa tagtgcgcca gcgcagaggg taatgcaatt tgctggcttt
     2641 catcttcgaa caagtgatcc cacagggtgt cgctgttatc catgcgggtg gcacgcagca
     2701 gcaaggcctg gctttcctct tgcgtatcag gcgaatcgtc cacttcttca ctctgcgccc
     2761 agcaaggcaa atcgatgaag taagtttgtg cctgaatacg acgtgcggct tgtagcgcct
     2821 gccactccgg cgaaaattca gcaaatggcg tccaggcacc acgcccgggg gctgcaccgt
     2881 cctgatactg gcaataactg taaatagcta ccggaagctg gtgggctaaa aacagttcgt
     2941 ctacccggtc attaaaatca gccgggcctt caatcaatac gtatcgtggc cgctggcttt
     3001 cgattaacga tttcaccagc cgggcgcagg ccggactatg atgccggatg ccgacaatta
     3061 acggctcgct catgcatctt tcctcacggc aggcggtggc gggcttgata ataagcctgc
     3121 cagtgagctt ctttatgtgt ggcgactcgt tgttcgaagt aacggcgcag acgagcgcga
     3181 tcttcttcgt tatctttgac gatggttccg gcaatgcagt ccaccaggtc ggctggctca
     3241 cctgcgcgat tcgctaaaaa ccaggcgcgg acgcctacgg cgtgggccac gttcacggct
     3301 tcagcggtgg acataatcgc tgttagtgta tccattgacg ttttcttttc gccgttggca
     3361 cgcagatcgc ggaaggtgcg gaccagtaac tccagtaccg cgtcaggcac tttatgcgga
     3421 ataccgctat gagccagcaa acgcgccgaa gcactggcga ccagttccag ctcctgggcg
     3481 aaatccataa tcggaaagac agtttcaaaa tcgaagcgac gctttagcgc agcactcatt
     3541 tcattgacgc cgcgatcgcg ggtattggca gtggcaataa tattaaagcc ttctcgcgca
     3601 tagagctgac tggcttcacc agtgagttcc ggcaccgtca tcaccctgtc agaaagcata
     3661 cctaacagac agtcttgcac ttccagcggt gtacgcgtta tctcttcaaa acggacgatt
     3721 ttgccgtcgc gcattccctg gtaaagcggg gcagggacca gcgcttccgt tgatggacca
     3781 tgattgataa gcagggcgta gttccagccg tacttgattt gatcttcggt agtagatgcg
     3841 ccgccctgga tggttaaccc ggcatcgccg ctaatagcgg ttgccagtaa ttcagacagg
     3901 agagattttg cggtgccagg ttcccccacc aacatcaaac cgcgtccggt ggcaagagtg
     3961 actaacatac gttcgacagc ggagggacta atcaccactt tacggctaat attttgcgcg
     4021 ctatcgccaa ggataaaagc acgggccgca ggcaaactta actgccaacc gggcgggcaa
     4081 ggtgcgttat cattttgttt taattttgcc agttcatcgg cgtataacac agcagcaggc
     4141 ggacgctgca gatgattatt ctgcggtgac atatattcat ccctgaaatg gattaatgaa
     4201 ataaacgata ttttacgcgc aataaatgtt tggcgcatta gttgtttgag cgaaaaatat
     4261 ctggaaagca gatcacagta aataaaaaaa cctgctggtg aggcaggttc ttttatttac
     4321 tactttcagg cctaacacca cagcctgtgc aacatcgtgt tccaacgaac gaattataac
     4381 cacggctgga ccccgttgca attaagataa tgagatttat aatccagacc gttgggacgt
     4441 tgcgccggat cgaatctatt tcaagtcctg gctaccggac gggtggtgct gcaggtggtg
     4501 ccctgatccg gagtgcaaca tcgtggtcca acatacgtaa accagtatcg acaggcagtg
     4561 taagggtaag gtgctggtgt tgcgctcctt aataaggaga gcggatggac acgctgacac
     4621 aaaagttaac cgtgctcatt gctgtactgg agctattagt ggctctgtta cggttgattg
     4681 atttgttgaa gtaacgggca acttgaaacg catctaaggg ggaatacag
//
LOCUS       DADKRT010000238         4675 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.243, whole genome shotgun sequence.
ACCESSION   DADKRT010000238 DADKRT010000000
VERSION     DADKRT010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4675
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.243"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            60..1859
                     /gene="cysJ"
                     /locus_tag="JQ356_003922"
     CDS             60..1859
                     /gene="cysJ"
                     /locus_tag="JQ356_003922"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HAY4623854.1"
                     /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL
                     NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
                     FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
                     ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
                     LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
                     SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
                     PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD
                     GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
                     LEVIAEFGGMDIEAADEFLSELRVERRYQRDVY"
     gene            1859..3571
                     /gene="cysI"
                     /locus_tag="JQ356_003923"
     CDS             1859..3571
                     /gene="cysI"
                     /locus_tag="JQ356_003923"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HAY4623855.1"
                     /translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPHHAMLLRCRLPGGVITTKQWQAIDKF
                     AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
                     PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
                     TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
                     LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
                     RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
                     TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
                     LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
                     RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
                     DLWD"
     gene            3646..4380
                     /gene="cysH"
                     /locus_tag="JQ356_003924"
     CDS             3646..4380
                     /gene="cysH"
                     /locus_tag="JQ356_003924"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HAY4623856.1"
                     /translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
                     PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
                     VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
                     RKWEPGMSEEETRFFGLKRECGLHEG"
BASE COUNT         1153 a         1219 c         1335 g          968 t
ORIGIN      
        1 tgttttatgg gcgctgacag ggcgcagaaa cagctttgct tactggaaca taacgacgca
       61 tgacgacaca ggtcccacct tccgcgttgc ttccgttgaa cccggagcaa ctggcacgcc
      121 ttcaggcggc cacgaccgat ttaacgccta cccagcttgc ctgggtttct ggctatttct
      181 ggggcgtact caatcagcag cctgctgcgc ttgcagcgac gccagcgcca gccgcagaaa
      241 tgccgggtat aactattatc tccgcctcgc aaaccggcaa tgcgcgccgg gttgctgaag
      301 cattacgcga tgatttatta gcagcaaaac tgaacgttaa gctggtgaac gcgggcgact
      361 ataaattcaa acaaatcgcc agcgaaaaac tgctcatcgt agtgacgtca acgcaagggg
      421 aaggggaacc gccggaagaa gccgtcgcgc tgcataagtt cctgttctcc aaaaaagcgc
      481 caaagctgga aaacaccgcg tttgccgtgt ttagcctcgg cgatagctct tatgaatttt
      541 tctgccagtc cgggaaagat ttcgacagca agctggcgga actgggtggt gaacgcctgc
      601 tcgaccgtgt cgatgccgat gttgaatacc aggctgctgc cagcgagtgg cgcgcccgcg
      661 tggttgatgc gcttaaatcg cgtgcgcctg tcgcggcacc ttcgcaatcc gtcgctactg
      721 gcgcggtaaa tgaaatccac accagcccgt acagcaaaga cgcgccgctg gtggctagcc
      781 tctctgttaa ccagaaaatt accgggcgta actctgaaaa agacgttcgc catatcgaaa
      841 ttgacttagg tgactcgggc ctgcgttacc agccgggtga cgcgctgggc gtctggtatc
      901 agaacgatcc ggcactggtg aaagaacttg tcgaactgct gtggctgaaa ggcgatgaac
      961 ctgtcaccgt cgagggcaaa acgttgcctc tgaacgaagc gctacagtgg cacttcgaac
     1021 tgaccgtcaa caccgccaac attgttgaga attacgccac gcttacccgc agcgaaacac
     1081 tgctgccgct ggtgggcgat aaagcgaagt tacagcatta cgccgcgacg acgccgattg
     1141 tcgacatggt gcgtttctct ccggcgcaac tggatgccga agcgctgatt aatctgctgc
     1201 gcccgctgac cccgcgcctg tattccatcg cctcctcgca ggcggaagtc gagaacgaag
     1261 tacacgtcac cgttggtgtg gtgcgttacg acgtggaagg ccgagcccgt gccggtggtg
     1321 cctccagctt cctcgcggat cgcgtggaag aagagggcga agtccgcgta tttatcgaac
     1381 ataacgataa ctttcgcctg cccgctaacc cggaaacccc ggtgattatg attggcccag
     1441 gcaccggtat tgcgccgttc cgcgccttta tgcagcaacg cgccgccgac gaagcgccag
     1501 gtaaaaactg gctgttcttt ggtaatccgc actttacgga agacttcctg taccaggtgg
     1561 agtggcagcg ctacgtcaaa gatggcgtgc tgacacgtat cgatcttgcc tggtcgcgcg
     1621 accaaaaaga aaaagtttac gtacaagaca aactgcgcga acagggcgcg gagctgtggc
     1681 gctggatcaa tgatggtgcc cacatttatg tctgcggcga cgctaatcgc atggcgaaag
     1741 acgttgagca ggcacttctg gaagtgattg ccgaatttgg tggcatggac atcgaagcgg
     1801 cggatgaatt tttaagtgag ctgcgcgtag agcgccgtta tcagcgagat gtctactaat
     1861 gagcgaaaaa catccagggc ctttagtggt cgaaggaaaa ctgacagacg ccgagcgcat
     1921 gaagcttgaa agcaactacc tgcgcggcac cattgcggaa gatttaaacg acggtctgac
     1981 cggcggcttt aagggcgaca acttcctgct gatccgcttc cacggcatgt atcagcagga
     2041 tgaccgcgac atccgcgccg aacgtgctga acagaagctg gagccgcacc acgcgatgct
     2101 gcttcgctgt cgtctgccgg gtggggtgat taccactaaa cagtggcagg cgatcgacaa
     2161 atttgccggt gaaaacacca tctatggcag cattcgcctg accaaccgcc agacattcca
     2221 gttccacggc attctgaaaa agaacgtcaa accggtgcac cagatgctgc actcggtcgg
     2281 tcttgatgcg ctggcgacag ctaacgacat gaaccgtaac gtactctgca cctcgaaccc
     2341 ttacgagtcg cagctgcacg cggaagcgta cgagtgggcg aagaagattt ctgagcatct
     2401 gttgcctcgt acccgcgcgt atgcggagat ctggctcgac caggaaaaag tcgccactac
     2461 tgatgaagaa ccgatccttg gtcagaccta cctgccgcgt aagttcaaaa ccacggtagt
     2521 gatcccgccg cagaacgata tcgatctgca tgccaacgac atgaacttcg tggcaatcgc
     2581 cgaaaacggc aagctggtag gcttcaacct gctggtgggc ggtgggcttt ctatcgaaca
     2641 cggcaacaag aaaacctacg cccgcacggc gagcgagttt ggctatctgc cgctggagca
     2701 tacgctggcg gtggccgaag ctgtcgtgac aactcagcgt gactggggta accgaaccga
     2761 tcgtaaaaat gccaaaacca aatacacgct ggagcgcgtg ggggttgaga cgtttaaagc
     2821 ggaagtggag cgtcgcgcgg ggatcaaatt tgaaccgatc cgtccatatg agttcaccgg
     2881 acgaggcgat cgtattggct gggttaaggg cattgatgat aactggcacc tgacgctgtt
     2941 tatcgaaaat ggtcgcatcc ttgattatcc ggggcgtccg ctgaaaaccg gcctgctgga
     3001 gatcgcgaag atccacaaag gcgatttccg cattacggcg aaccagaatc tgatcatcgc
     3061 cggtgtaccg gaaagcgaga aagcgaagat cgagaagatc gccaaagaga gcgggttaat
     3121 gaatgccgtc acgccgcagc gtgaaaactc gatggcctgc gtgtcattcc cgacttgccc
     3181 gctggcgatg gcggaagcag agcgtttcct gccgtctttt atcgacaaca tcgataattt
     3241 aatggcgaaa catggtgtca gcgatgagca tatcgtgatg cgtgtaacag gctgcccgaa
     3301 cggttgtggt cgcgcgatgc tggcggaagt gggcctggtg ggtaaagcgc cgggtcgcta
     3361 caacctgcat cttggcggca accgcattgg gacacgtatc ccacggatgt ataaagaaaa
     3421 catcaccgag ccggaaatcc tggcgtcgct tgatgaactg atagggcgct gggcgaaaga
     3481 gcgcgaagcg ggtgaaggct tcggcgactt tacggtgcgt gcgggcatca ttcgcccggt
     3541 gctcgatccg gcgcgcgatt tgtgggatta accatcagcc cggtcttgta ggcctgataa
     3601 gaacgcgtga gcgtcgcatc aggcaaggca aacagtgagg aatctatgtc caaactcgat
     3661 ctaaacgccc tgaacgaact gccgaaggta gatcgcattc tggcgctggc ggaaactaac
     3721 gccgaactgg aaaaactgga cgctgaaggc cgcgtagcct gggcgctgga taatctgccc
     3781 ggtgaatatg tactttcttc cagctttggc attcaggcgg cggtgagcct gcatctggtg
     3841 aatcaaattc gcccggatat tccggtgatc ctcaccgata cgggttactt gttcccggaa
     3901 acctaccgct ttattgacga gttaacggac aaactcaagc tcaacctgaa agtgtaccgt
     3961 gctaccgaaa gcgcagcctg gcaggaagca cgctacggaa aactgtggga gcagggcgtt
     4021 gaaggcattg aaaagtacaa tgacatcaac aaagtcgaac cgatgaaccg ggctctgaaa
     4081 gaacttaacg cgcaaacctg gtttgctggc ctgcgccgtg aacaatccgg cagtcgcgcc
     4141 aatttaccgg tgctggcaat tcagcgtggc gtatttaaag tgctgccgat tatcgactgg
     4201 gataaccgaa ctatttatca gtacctgcaa aaacatggcc tgaaatatca cccattatgg
     4261 gatgaaggat atttatcggt cggtgatacc catacaaccc gtaaatggga acctggcatg
     4321 tcggaagaag aaacacgttt ctttggctta aaaagggaat gtggattgca cgaagggtaa
     4381 atattgccgg ataaattaaa cgcctctgtc agaaatgatg ggggcgtttt tattttgcga
     4441 gcagtattcc tgattttaaa cgtgaacgcc gctggaagaa ttatcaggta tagaatggcg
     4501 tcgggtgctt gaggctgtct ggcgttaagc attcgcgagg ttccagatgg acaaaagccc
     4561 caggcgatat ttctatcaac ctgaggccag cgttcgaacc caaacaattc gaatgttagt
     4621 ctcttctttg cagggaggca agacatgctg acaaaatatg cccttgtggc aatcg
//
LOCUS       DADKRT010000239         4662 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.244, whole genome shotgun sequence.
ACCESSION   DADKRT010000239 DADKRT010000000
VERSION     DADKRT010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4662
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.244"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..755)
                     /locus_tag="JQ356_003925"
     CDS             complement(<1..755)
                     /locus_tag="JQ356_003925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic diguanylate phosphodiesterase"
                     /protein_id="HAY4623857.1"
                     /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
                     RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV
                     QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
                     AGVMEMINIDLLTAMLLEPQLQQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
                     SQRFPFTINVNGPGATALAWHYLPTQLPLAVLL"
     gene            complement(886..2250)
                     /locus_tag="JQ356_003926"
     CDS             complement(886..2250)
                     /locus_tag="JQ356_003926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine dehydratase 1"
                     /protein_id="HAY4623858.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGR
                     HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
                     AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
                     VQCD"
     gene            complement(2434..3012)
                     /locus_tag="JQ356_003927"
     CDS             complement(2434..3012)
                     /locus_tag="JQ356_003927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HAY4623859.1"
                     /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP
                     GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLP
                     PVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
                     HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP"
     gene            complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="JQ356_003928"
     CDS             complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="JQ356_003928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HAY4623860.1"
                     /translation="MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
                     RFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
                     QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
                     NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF
                     HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
                     LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
                     PAVHHLVSTITARLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
                     SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVTKILRQ
                     LEK"
     gene            4451..4630
                     /locus_tag="JQ356_003929"
     CDS             4451..4630
                     /locus_tag="JQ356_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HAY4623861.1"
                     /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
                     HSGERIVARFEDEDE"
BASE COUNT         1170 a         1199 c         1212 g         1081 t
ORIGIN      
        1 cttagcagca ccgccagcgg taattgtgtt ggaagatagt gccatgccag cgccgtagcc
       61 cccggaccat taacgttaat ggtaaaagga aagcgttgcg aagaaacctg atagttttca
      121 ttgtcttcag gttgcggaag ggaatctacc agcccattac catagagcaa atgccgtttg
      181 tccaccgtca ggctggcgct actgatttgc tgcagttgtg gctcaaggag cattgccgtc
      241 agtaagtcga tgttaatcat ctccatgacc ccagcattgc tactgcccgc tgcaggcgtc
      301 cattgaatca aaaccggact gcctttaatc agggcacggt cgatcgtcag gcgtaaaagt
      361 ggttgcggtg caggaagttc agccagaatg tccacgacgg gcacattgcg ataaccaaaa
      421 atgctggagc aatagagtgt gccgtcttgc accaggccaa tggatcgcac agtttggagt
      481 tttgccgcct gtttacgtaa tggcaaatgg gcgacagagc agggcagacc aatcagcgga
      541 agcaagactt cgctacctgc ctgtagggga agcagtactt tatctaattc ctctacagcg
      601 tgattggcga attgtactac ccgttgttga tttaagttac gctgtgaaat aaatcgcacg
      661 ctcagggtcg aagcgagcgt aacgagtgcg caaatcgtac aaacaatcat tcgattacgt
      721 cgataggttt taatgatccg ttgtgctttt tgcatgcggg ccaccctgta agcgtatggc
      781 gacaaacgcc tgacgcaaca gtggatgtgt agtggggaat attacagcag acgagaaagc
      841 gggtataaat tcgcccatcc gttgcagatg ggcgagtaag aagtattagt cacactggac
      901 tttgattgcc agaccaccgc gtgaggtttc gcggtatttg gcgttcatgt ccttaccggt
      961 ttcgtacatc gtttcgatga ccttatccag cgagacgcgc ggtgcactgg tgcggcgcag
     1021 agccatccgt gcggcgttaa tcgccttcac agaggcaatg gcattacgct caatgcacgg
     1081 cacctgaacc tgccctgcaa ccgggtcgca ggttaaacca aggttgtgtt ccatgccaat
     1141 ttccgccgcc acgcaaacct gttccgggct accgcccagc agttctgcaa gacccgcagc
     1201 agccattgaa caggcaacac ccacttcgcc ctggcaacca acttccgcac cggaaataga
     1261 ggcgttcatt ttatacaatg caccaatcgc gcccgctgcc ataaagtaac gggtatagat
     1321 gtccgggctg accgattcaa taaagtggtc atagtaagcc agcactgccg gaacgatacc
     1381 gcaggcaccg ttggttggcg cagttaccac acgaccaccg gcggcgtttt cttcgttaac
     1441 tgccagcgca aacatgttta cccagtcaat gacattcatc ggatcgttag acagtttatc
     1501 gctggaaacc agcatccggc gcagggcaga cgcacgacgt ggcacgcgca gcgggcctgg
     1561 cagtacacct tcggtgttca tcccgcgatc gatacatgcc tgcatggttt gccagacatg
     1621 cgcgaaatac tcgtcgatct ctttcttgct gtgcagcgcc agttcgttct gcatagcgag
     1681 accagacagc gaatagccgg tttcattaca gtacgcgagc agttcggtgg cagatttgaa
     1741 cggatacggc acgctcactt cgttggcagc atcctgacca aagtgttctt catcgacgat
     1801 aaaaccgccg ccgatggaat aataagtttt gctgtagacg acttcatcgc cgttataggc
     1861 gtggatttgc ataccgtttt catgcagcgg caggttgccg ttatgaaaac gcatcccgtt
     1921 gtcgcgcggg aaatccactt catgccgtcc ctgtgccagc agcagacgtt cgcgctcttc
     1981 tacgtcgcga ataaaaccgg gaatactgtc gatatccacg gtggcaggtt cgttacctgc
     2041 aagacccata ataatggcga tatcggtgtg gtggccttta cccgtcagcg acagtgaacc
     2101 ataaacgtcc acggcaacgc gagtaacgct atccagtaag cctttttcga ccagatcatc
     2161 gacgaactgt ttacccgcct tcataggccc tacggtatgg gaagatgagg gaccaatccc
     2221 caccttaaac atgtcgaata gactaatcac gataatactc ctgacaaggt gactggactt
     2281 ccagtaacga actaataaca gcgcatagtg taagagggaa cgcggcgact ggcttaacta
     2341 ttcacatgaa ttaaactaat caaaaaccgc gatttaacta atattgcgat gattgtctca
     2401 agtagtgttt tgtagatgta aagataagta tagtcagggt ttcacaccaa tttgcagcgc
     2461 cagctcacga attatgcctg cggtcattcc ccatacaaaa tactgttcgt accaggacag
     2521 ccatacccga tgtgaatcgc cacggcggta gatatctaaa gggtgataac gacccagatg
     2581 taatgcctgg gcgagcggca tttcaaacac cgccgagact tcatcttcac tggcgcgata
     2641 cggcagatcg ggcgggataa tgccgatcac tggggttacc tgatagccag ttacgctatc
     2701 gacgggcggc agcacgccga taacttcaac ggcggaaggc ggtatagcga cctcttcttc
     2761 agcttcgcgc agcgcggcgg cgataactga tgcgtccgtg tcatcgactg cacctccagg
     2821 gaatgccact tgtccagcgt gtttacgcag atgaattgaa cgctgagtca gcaacaaccc
     2881 cggttgcggt cgacggacga tggggattaa cacggcagcc tgacgatgat ttagggtttc
     2941 ccggttaatt tgcgggcgca aaagttgaaa gcgagataaa aaatcatcaa gcgtcaggct
     3001 acggtattcc acgtcttact tctccagttg gcgtaatatc ttagtaactt tatcaaaagt
     3061 ttcctgatat tccgcttctt cctggctatc ggcgacaatt ccaccgcccg cagagcagta
     3121 tatttgtccg ttaatggcag tcagcgtgcg gatagtaatg ctggtatcca tgttgccgca
     3181 aaagctcaaa tagccaatgc tgccgcacca ggcattacgt cgctgcggtt ccagttcgtc
     3241 gataatttcc atagcccgta ctttcggagc cccggttatt gagccaccag gaaaagctgc
     3301 gcgcagcaga tcgctggcgt gtaactgttc tggtagtcgc gccgttatag tgctgaccag
     3361 atgatgcacg gcagggaagg gttccaccac gaagagctct ggtactttta ccgaaccggc
     3421 tacggcaaca cgaccgatat cattacgcat taaatcgaca atcatcagat tttcggcacg
     3481 atctttcgct gagttcgcca gtttttctgc ttgtttgcta tcttcctgag gatcgggcag
     3541 gcgtggtagc gtgcctttaa tcgggcgggt ctggatttca ctattatcac aaagaataaa
     3601 ccgctctggc gaaaggctta aaattgcacc ctgttcaaga cgtaaaaaag cgctaaatgg
     3661 cgcgcggttg gcctgattaa gctgaaggaa tgcctgccat tcatcgccag aataggtcgc
     3721 atgaaaacgc tgggcgagat tcacctgata gcaatcaccg ctgtgcagat attcctgtac
     3781 ctggcgaaat ttttcgccgt actgctcgcg ggtcatattg gattgccagt cggaagtgag
     3841 cgtgaaatct tcctgcggcg agaattgctg gctttccagc caggcccgac gggcattgac
     3901 atcattatga ctcagcaaag aaactgtatg acgctggtgg tcgacaatga gcgcccaatc
     3961 gtagataccc actgccatat ccggcagaac gatatcttgt tccgcaattt ctggcagtga
     4021 ctcaaaacgg cggcccagat cgtagccaaa caaccccagt gcgccgccct gaaatggcaa
     4081 atcttcgtta tgcgttgggc gaatgtctgc gcgatccagc acctgctgga gcacctgtag
     4141 cgggtcatca gtggtcgttg tgcgtttttc gctttcacta acaacggttt ctttaccgaa
     4201 agtggttaaa gtgcaaatcg gctcggcgac cacaatatca aagcggctat acggatgatc
     4261 ggcatagccg gagtgtaaaa gcatcgccca cggcaggtgg cttaagcggg agaaataaaa
     4321 ttcagcggcg tcctgacgcc agggtaaagt aatcacagcg ggagataacg tcttcatcag
     4381 tcctgactct actggctatg tgccgggtag catgaaataa ttagcgccaa caatttagca
     4441 ggagttaaca atgtttgcag gtttaccttc actcacccat gaacagcagc aaaaagctgt
     4501 cgagcggatc caggaactga tggcacaagg gatgagcagc ggccaggcaa tcgcgctggt
     4561 ggcagaagag ctgcgtgcca accactccgg cgagcgaatc gtggcgcgtt ttgaggatga
     4621 agacgagtaa cacactaatc cgtatcgatt tcgttataga ag
//
LOCUS       DADKRT010000240         4585 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.245, whole genome shotgun sequence.
ACCESSION   DADKRT010000240 DADKRT010000000
VERSION     DADKRT010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4585
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.245"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            250..615
                     /gene="queD"
                     /locus_tag="JQ356_003930"
     CDS             250..615
                     /gene="queD"
                     /locus_tag="JQ356_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HAY4623862.1"
                     /translation="MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGE
                     VDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPL
                     LSAVMVKETCTAGCIYRGE"
     gene            693..1961
                     /locus_tag="JQ356_003931"
     CDS             693..1961
                     /locus_tag="JQ356_003931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY4623863.1"
                     /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
                     SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRA
                     RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL
                     AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
                     FLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP
                     EGGLHSMPVQYAGNGWQLVGDALRSCVNTGISVRGMGMALTGAQAAQTLISACQHREP
                     QNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPV
                     PPLRQLFWRHLRRHGLWHLAGDVIRSLRCL"
     gene            1952..2212
                     /locus_tag="JQ356_003932"
     CDS             1952..2212
                     /locus_tag="JQ356_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY4623864.1"
                     /translation="MSVAHNLWRVADAPHIVPADSVERQMVQWLINACPAGLFSLTPE
                     GDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFSITYRFG"
     gene            2229..2804
                     /locus_tag="JQ356_003933"
     CDS             2229..2804
                     /locus_tag="JQ356_003933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HAY4623865.1"
                     /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
                     NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
                     FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
                     DEEDACNAINAGVVALSTTNTGVWTLAKKLL"
     gene            complement(2952..3812)
                     /locus_tag="JQ356_003934"
     CDS             complement(2952..3812)
                     /locus_tag="JQ356_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HAY4623866.1"
                     /translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV
                     LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW
                     GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDWLVSTEDLKNV
                     TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG
                     HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA
                     LVTNIHADCQ"
     gene            complement(3809..>4585)
                     /locus_tag="JQ356_003935"
     CDS             complement(3809..>4585)
                     /locus_tag="JQ356_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HAY4623867.1"
                     /translation="NILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQ
                     AAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEF
                     VARHIAEWQHQNPLDLIITGSQSSEGQNGQTPFLLAEMLGWTCFTQVERFTLDALFIT
                     LEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAM
                     QCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP"
BASE COUNT         1055 a         1234 c         1164 g         1132 t
ORIGIN      
        1 agataaggtt aacggggtga acggtgtgga ttaaagacgg gatagcgata actaataacc
       61 aaatcgacta acctgtttta gcaatagtct ttaacaacaa aatagattaa ccaacccaat
      121 gaaaaacaaa tgaatttagc caatcattaa gataaatcag cgattttgcg caacaaagtc
      181 gttttagata atgcgaaaaa acagcctttc cggtactcta cggcggtttt atcgtcctgt
      241 agagaaatta tgatgtccac cacgttattt aaagatttca ccttcgaagc cgctcaccgc
      301 ttaccacacg tcccggaagg gcataaatgt ggtcgcctgc acgggcattc ctttatggtg
      361 cgactggaaa ttaccgggga agtcgatccg catacgggct ggattatcga tttcgctgaa
      421 ctaaaagcgg cgtttaagcc aacttatgag cgcctcgatc accattatct caatgatatt
      481 ccaggtctgg aaaacccaac tagcgaagtt ttagcaaaat ggatttggga tcaggttaaa
      541 cccgttgtgc cgctgttaag tgcggtgatg gtaaaagaaa cctgcaccgc tggttgtatc
      601 tatcgcggcg aatgataaga gtgtgtcggc ggtcaatttc ccttaagtaa cgctatgtta
      661 gggtattgtg ttcaggatat ctggggcatg acatggaaga cgactgcgac attattatta
      721 ttggtgccgg tattgcaggc accgcttgcg cgttacgctg cgcgcgagcg ggtttatccg
      781 ttttgttact ggaacgcgct gaaatccccg gcagcaaaaa tctttccggc ggacggttat
      841 atacccatgc actcgcggaa ctcctccctc agtttcatct gaccgcgcct cttgaacgac
      901 gcatcactca cgaaagcctt tccctgttaa cgcccgatgg cgtaacgacg ttttccagct
      961 tacagcccgg cggtgaatcc tggagtgtat tacgtgcacg gttcgatccg tggctggttg
     1021 ccgaagccga aaaagaaggt gtcgaatgta tccccggagc gacggtggat gcactgtatg
     1081 aagaaaacgg cagagtctgt ggcgttattt gtggtgacga tattctccgc gcccgttatg
     1141 tggtgctggc agaaggtgcc aacagcgtcc tggctgaacg tcacggatta gtgactcgtc
     1201 ctgctggcga agcgatggcg ttggggatca aagaagtgct gtcgctggaa acatccgcta
     1261 ttgaagaacg ttttcatctg gagaataacg aaggcgcagc gttgctgttc agcggcggaa
     1321 tctgtgatga cttacccggc ggcgcatttc tttatactaa tcaacaaacg ctctcgttag
     1381 ggattgtttg cccgctctct tcccttacgc aaagtcgtgt tccggcaagc gagctgctga
     1441 ctcgctttaa agcgcatccg gcagtgcgcc cgcttatcaa aaacacggaa tcactggagt
     1501 atggtgcgca tctggtgcca gaaggtggct tgcacagtat gccggtgcaa tacgccggta
     1561 acggctggca gctggtgggc gatgcgttgc gcagttgcgt caataccgga atttccgtgc
     1621 gcggcatggg tatggcgctg actggcgcgc aggcggcaca aacgctgata agcgcctgcc
     1681 agcaccgcga gccgcaaaat ctgtttgcgc tttatcatca caacgtagag cgcagcctgc
     1741 tatgggatgt tctacaacgt tatcagcatg ttccggcgct tttgcaacgc cctggctggt
     1801 atcgggcgtg gcctgcgtta atgcaggata tttcccgcga tttatgggat cagggtgata
     1861 aacctgttcc accgctgcgc cagttattct ggcgtcattt acgtcgtcat ggcctgtggc
     1921 atctggcggg cgatgttatc aggagtctgc gatgtctgta gcccataatc tctggcgcgt
     1981 tgctgatgcg ccgcacattg ttccggctga ctccgttgag cgtcagatgg tacaatggtt
     2041 gattaacgcc tgtccggcag gtcttttttc gctcacaccg gaaggtgact tacgcgttga
     2101 ttatcacggc tgcctggagt gtggcacctg ccgtttgctg tgcgacgaat ccacactaca
     2161 acagtggcgc tatccgcctt ccggattcag catcacctac cgctttggat aaataataag
     2221 gataatttat gcccctctta cacctgctcc gccagaatcc ggtgattgct gccgttaaag
     2281 ataatgccag cctgcaactg gcaatcgact ctgaatgcca gtttatttcc gtgttgtacg
     2341 gcaatatctg caccatcagt aatatcgtta aaaagattaa gaacgccggg aaatatgctt
     2401 ttattcatgt tgatttgctg gaaggcgcgt caaataaaga agtcgtgatt cagtttttga
     2461 aactggtgac cgaggcggac ggcattatca gtaccaaagc ctcaatgttg aaagcggcaa
     2521 gagcggaagg ttttttctgt attcatcgcc tgtttattgt tgattcaatt tcgtttcaca
     2581 acattgataa gcaagttgcg caatcgaatc cggattgtat tgagatcctg ccaggctgta
     2641 tgcccaaagt gctgggctgg gtgacagaga aaatccgcca accgctgatt gccggtgggc
     2701 tggtgtgcga tgaagaagat gcgtgtaatg cgattaacgc gggtgtcgtg gcgctttcca
     2761 ccacgaatac cggggtctgg acgttagcga aaaaattact ttgacgggat aatcgtaacc
     2821 aattgaattt ggtttgattt gtaggccgca cgccacatcc gacattcagc gcctgatgcg
     2881 acgcttgacg cgtcttatca ggcctacaag tccccaggcc agaaccgtag gcaggatcat
     2941 ccggcaacac attattggca atctgcgtga atgtttgtca ccagtgcctc cagcaccact
     3001 ttccagtcat caaccacgcc aacatctgcc tgtgaaaata ccgcagcgct ggcgtcatga
     3061 ttaatcgcca ccacaaactt gctattgcgt acgcccgcca ttaacgctgc tgcgccggaa
     3121 gcgccaacaa caatacacac ctcaggtgcc agcaaatgtc cggaaatacc aatcactttt
     3181 tcagcatcaa cgccaccgtt catcactcgc gcccgactgt agcccacttc ggctcccagc
     3241 ttttctgcca gcatagcgat ttcctggtta tctgcctctc cgccctgccc caccaccagc
     3301 acccgtctgg cctcagctaa tgggtcgcga gtaacatttt tcagatcctc tgtgctaacc
     3361 agccagtcgg gaagcgcacc cgggacaatg ttcagttgtt gtattccaga gggcaacgtg
     3421 gcgtttttcg ctgctcccgc ctgacgcgcc agagaaaggc atagcgggcg tttttctgtt
     3481 tgcagcgtcg ccgttagcgc atttccccag tgggatttgc gcacgcttac ggttggaata
     3541 tctaacgaag tcacctggca gatgcttgca ccatgtaaac gccaggccag ccgggtcgac
     3601 agttcatcgc caaacgttcc cggcggaaag agaacaacgt ccgcaggcgt tcgctgccac
     3661 tgttccacca acgcatccag cacctgttcc gccactacag gctgaggttc aatctgccag
     3721 tgcgccaggg tacaaccact gaaatcctgc gccgccagcc agcttgctat tgcggcattc
     3781 tcctgattta ttgtcacaat tgcgatattc atggctgcat cctttggcgt aaatagtcct
     3841 gccatagctt ttgagctttt tctgctaccg tttgcccatc aatcagcgtc gctccgcgtc
     3901 gttgctctgc tcttgccagt tgcagacact gcatcgctgg catttcggca gcaacagttt
     3961 tacggataat ttctgctttc cccgcagcca ttcgctggcg cattcccggt actggcaagg
     4021 ccacttcacc gcactgacgc acggcaatca ccgcaggcaa gcgaacccgg caacaacgca
     4081 acccatgttc agtacgctgt tcgagggtga taaacagcgc gtcgagagtg aaacgctcca
     4141 cctgggtgaa gcaggtccag cccagcattt ccgccagcaa aaatggcgtt tgcccattct
     4201 gcccttcgct gctttggctg ccggtaatta tcagatccag cggattctga tgctgccatt
     4261 cggcaatatg gcgagcgaca aattccggcg caaagcgcag atctgccgcc gtctccagca
     4321 atacagcttc ctcaaaccca agagccatga gatagcgcag ccagtgcaat gcccgttcat
     4381 cccccatgct caacgcggtt aaagacatcg gcgtaccgtt ttttctctgc gccaacagca
     4441 gcgcggcagc ggcctgttca tcagcaccga gtaaacttcg cagtagcgaa atatccggtc
     4501 cgcttttacc ctgagccgcc gcctgccact ctttttccgc cagcattccg gcatccggtt
     4561 cggctttaaa cgctaacaga atgtt
//
LOCUS       DADKRT010000241         4436 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.246, whole genome shotgun sequence.
ACCESSION   DADKRT010000241 DADKRT010000000
VERSION     DADKRT010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4436
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.246"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1088
                     /gene="nadB"
                     /locus_tag="JQ356_003936"
     CDS             <1..1088
                     /gene="nadB"
                     /locus_tag="JQ356_003936"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HAY4623868.1"
                     /translation="VGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGD
                     GIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDF
                     DERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDL
                     TQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLV
                     YGWSAAEDITRRMPDAHGVSTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVR
                     TTKRLERALRRINMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGL
                     HFTLDYPELLTHSGPSILSPGNHYINR"
     gene            complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="JQ356_003937"
     CDS             complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="JQ356_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HAY4623869.1"
                     /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG
                     VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHT
                     ADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARYTTTLDHPSLLTCAAECIT
                     EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGPDQNYSEAYTALTQAFYLFM"
     gene            1942..3276
                     /gene="srmB"
                     /locus_tag="JQ356_003938"
     CDS             1942..3276
                     /gene="srmB"
                     /locus_tag="JQ356_003938"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HAY4623870.1"
                     /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRGRVHELANWLREAGINNC
                     YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
                     RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIEELRPKTRTPSEKQTG
                     KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
     gene            complement(3485..4366)
                     /locus_tag="JQ356_003939"
     CDS             complement(3485..4366)
                     /locus_tag="JQ356_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311470.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4623871.1"
                     /translation="MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFS
                     VQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKGSDPDGELRVVSGETLLS
                     YRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELG
                     EQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIEL
                     LSIESIKRCVAANIGVSYLPRFAVEKELESGELIELPFGEQSQTITAMCAHHAGKAVS
                     PAMHTFIQCIEECFLPG"
BASE COUNT         1125 a         1209 c         1125 g          977 t
ORIGIN      
        1 ttgtaggcgc gtgggtatgg aaccgaaata aagaaacggt ggaaacctgc cacgcaaaag
       61 cagtggtact ggcaaccggc ggtgcgtcga aggtgtatca gtacaccacc aatccggata
      121 tttcttctgg cgatggcatt gctatggcgt ggcgcgcggg ctgtcgggtt gccaatctcg
      181 aatttaatca gttccaccct accgcactgt atcacccaca ggcacgcaat ttcctgttaa
      241 cggaagcact gcgcggcgaa ggcgcttatc tcaagcgccc ggatggcacg cgttttatgc
      301 ccgattttga tgagcgcggc gaactggccc cgcgcgatat tgtcgcccgc gccattgacc
      361 atgaaatgaa acgcctcggc gcagattgta tgttcctcga catcagccat aagcccgccg
      421 attttattcg ccagcatttc ccgatgattt atgaaaaatt gctcgggctg gggattgatc
      481 tcacacaaga accggtaccg attgtgcctg ctgcacacta tacctgcggt ggtgtaatgg
      541 ttgatgatca tgggcgtacg gacgtcgagg gcttgtatgc cattggcgag gtgagttata
      601 ccggcttaca cggcgctaac cgcatggcct cgaattcatt gctggagtgt ctggtctatg
      661 gctggtcggc ggcagaagat atcaccagac gtatgcctga tgcccacggc gtcagtacgt
      721 taccaccgtg ggatgaaagc cgcgttgaga accctgacga acgggtagta attcagcata
      781 actggcacga gctacggctg tttatgtggg attacgtcgg cattgtgcgc acaacaaaac
      841 gtcttgagcg cgccctgcgg cgtatcaata tgttgcaaca ggaaatagac gaatattacg
      901 cccacttccg cgtgtcgaat aatttgctgg agctgcgtaa tctggtgcag gttgcggaat
      961 tgattgttcg ctgtgccatg atgcgcaagg agagtcgtgg cctgcatttc acactggatt
     1021 atccggaact gctcacccat tccggtccgt cgatcctttc ccccggcaat cattacataa
     1081 acagataaaa agcctgggtc agcgccgtat acgcttcgga atagttctgg tctggcccac
     1141 gaatgactaa gcgatcgcta aagcattctc ccgcctgcgg ggagaatgcc agcagcaccc
     1201 gatgcggcag tcgcgcttcg ttttccgcca catccgtccg caaacgtaaa tgccagccca
     1261 tgcttaatgc cagctccgta aaaccattac caatctgctc tggcagcact acgcagaaaa
     1321 atccctcttc ggtaatgcac tccgccgcac aggtcagcag cgatgggtga tcaagcgtag
     1381 tggtatagcg agcctgttcc cgttgaggga tcgcgcactc tactccctgc tgatagtaag
     1441 gtgggttact gatgattaaa tcgaagcgta ctgtctgctg tgtgagccac tgctgaatat
     1501 ccgccgtatg gacgttaatc cgctctgccc acggggactg gttgatattt tcctgcgcct
     1561 gcgcggcagc ttcactttcc agctcaacag catcaattat cacgctgtca ctggttcgct
     1621 gcgccagcat cagtgccagc aacccgctac ccgcgccgat atcaaggcaa cgtttcaccc
     1681 cagccaccgg tgcccatgcg cccagcaaaa tgccatccgt tcccactttc atcgcacagc
     1741 gatcgtgagc aacaaaaaac tgtttaaaag taaatccatt acgacgaagc acggatgtag
     1801 actgtgacat gaaaataaaa ccttgcagga aaaacggcga tagcaccggg tgagaacaat
     1861 acccgagaag cgatatccat acaaacagat gaagattgca gccgtaacgt ctataatcag
     1921 cgccccacac agaggtagaa catgactgta acgacttttt ccgaacttga actcgacgaa
     1981 agcctgctgg aagccctcca ggataaaggt ttcactcgcc cgaccgccat tcaggctgcc
     2041 gccattccgc ctgcgctcga tggccgtgat gtactcggtt ctgcgccgac aggcaccggt
     2101 aaaacggcgg cgtatctgct gccagcgttg cagcacctgc tcgatttccc gcgtaagaaa
     2161 tccggtccgc cgcgtatttt gatcctcacc ccaactcgcg agctggcgat gcaggtggcc
     2221 gatcatgccc gcgaactggc gaaacatacg catctggata tcgccaccat taccggcggc
     2281 gtagcctata tgaaccacgc ggaagtgttc agcgaaaatc aggacatcgt ggtcgccacg
     2341 accggacgtc tgctgcaata cataaaagaa gagaacttcg attgccgcgc ggttgaaacg
     2401 ctgatcctcg acgaagcaga ccgtatgctg gatatgggct tcgctcagga tatcgaacat
     2461 attgctggcg aaacgcgctg gcgtaaacag accctgctct tttcggcaac gctggaaggc
     2521 gatgcgattc aggactttgc cgagcgtctg ctggaagatc cggtggaggt ttctgccaat
     2581 ccgtccaccc gtgagcgcaa aaaaattcat cagtggtatt accgcgccga tgacctggaa
     2641 cataaaaccg cattgctggt gcatctgtta aaacagccgg aagcgacccg ctcaattgtg
     2701 tttgtgcgta agcgtggacg tgtgcatgag ctggcaaact ggctgcgcga agcgggcatc
     2761 aacaactgct atctcgaagg tgagatggta cagggcaagc gtaatgaagc gattaaacgc
     2821 ctgaccgaag gccgcgtaaa cgtactggta gcaaccgatg ttgccgcgcg cggtatcgac
     2881 attccagacg tcagccacgt ctttaacttc gatatgccgc gcagtggtga tacttatttg
     2941 caccgtatcg gacgtaccgc gcgcgccggt cgtaaaggca ccgcgatttc gctggtggaa
     3001 gcccatgacc atctgctgct tggcaaagtt ggccgttata ttgaagagcc gataaaagct
     3061 cgcgtcattg aggaactacg cccgaaaacg cgtacgccaa gcgagaagca gaccggcaag
     3121 ccatcgaaga aagtactggc aaaacgcgcc gagaagaaaa aagctaaaga gaaagagaag
     3181 ccgcgggtga aaaaacgcca tcgcgacacc aaaaatattg gtaagcgccg taaaccgagc
     3241 ggaacgggcg tgccaccgca aacgacagaa gagtaatctt aattccgggt ttaagcccgg
     3301 aattaaaagt gctggcaaac gcaaaactgc ctgatgcgct acgcttatca ggcctacatg
     3361 gctcatgcaa tatattgaat ttgcacgatc ttgtaggccg gataaggcgt tcacgccgca
     3421 tccggcatga acaaaacgca cttcgtcgac aagttgggtg ccgggtttaa gcccggcatt
     3481 atttttatcc cggcaaaaaa cactcttcaa tacactgaat aaaagtgtgc atcgccgggc
     3541 taaccgcttt tccagcatgg tgtgcgcaca tagccgtaat ggtctgcgac tgttcgccaa
     3601 aaggcaattc aattaattct ccgctctcaa gctctttttc caccgcaaag cggggcaagt
     3661 aactgacacc gatattcgcc gcgacacaac gtttgatact ttcaatgctt aacagctcaa
     3721 tggtgttttc caccgtgatc cgccgctgac gcagcgtgct ctcaaatatc tgccggaaga
     3781 cacattgcgg ttcgttgata ataaagctac aggcgttatg tcttcccggc tcagtaaaat
     3841 cgacatctgc aatttgcggt gaagccacca gcaccagcga ttgttcaccc aactctcgtc
     3901 ggttcagggc atcatcattc cctacgcgat aaaagacgcc gacatcggcc tcatcattca
     3961 gtagcgcatc acggatcacg taacagttca gcgactgcaa cgataaacgc acttttggtg
     4021 cgcgttgccg aaaacgctgc aacacctgcg gcattcggta agagagcaac gtttcgcccg
     4081 aaacaacgcg tagttccccg tccggatctg accccttttt ggcagcctca cgaagcgtat
     4141 ccatcactcg ggtaagttca taaatgtgcg gcagcaactt ttttccttcg cgggtaaggc
     4201 acatccgtcg gccaattttc tcaaataact ggactgaaaa ctcctgctca agctgctgaa
     4261 tatgaaaagt caccgtcgat tgtgtacagc acaatttttg cgaagctcgc aaaaaggaac
     4321 cctcttccac cacggtttta agcgtaataa aacggcgcag atccataacc ccgaacctat
     4381 cgaaaatatc gaatctagaa tataaaaaca ttcatttttt taaatgttct gtgtcg
//
LOCUS       DADKRT010000242         4429 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.247, whole genome shotgun sequence.
ACCESSION   DADKRT010000242 DADKRT010000000
VERSION     DADKRT010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.247"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            127..456
                     /locus_tag="JQ356_003940"
     CDS             127..456
                     /locus_tag="JQ356_003940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY4623872.1"
                     /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE
                     AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA
                     LLSMRKS"
     gene            704..949
                     /gene="nrdH"
                     /locus_tag="JQ356_003941"
     CDS             704..949
                     /gene="nrdH"
                     /locus_tag="JQ356_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HAY4623873.1"
                     /translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
                     AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
     gene            946..1356
                     /gene="nrdI"
                     /locus_tag="JQ356_003942"
     CDS             946..1356
                     /gene="nrdI"
                     /locus_tag="JQ356_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HAY4623874.1"
                     /translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL
                     IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
                     VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
     gene            1329..3473
                     /gene="nrdE"
                     /locus_tag="JQ356_003943"
     CDS             1329..3473
                     /gene="nrdE"
                     /locus_tag="JQ356_003943"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HAY4623875.1"
                     /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
                     MATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAYAHTSGFRFQTF
                     LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFHLAKENVQMALFSPYDVERVYGKPFADIAISEHYDEL
                     VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPVAGRINMSNLCSEIL
                     QVNCASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH
                     IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT
                     SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMW
                     AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
                     PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
     gene            3483..4397
                     /gene="nrdF"
                     /locus_tag="JQ356_003944"
     CDS             3483..4397
                     /gene="nrdF"
                     /locus_tag="JQ356_003944"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HAY4623876.1"
                     /translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPYALTPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL
                     KSFAFDLLLELYDNELQYSDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA
                     EVNPAILAALSPNADENHDFFSGSRIGN"
BASE COUNT         1093 a         1131 c         1131 g         1074 t
ORIGIN      
        1 cgggcctacc ttacctgatt gcgcattcac aacgctttca gaaaagtcca taaagccgcg
       61 atgaacctca gttaagaaaa ttatggtcta cactgaaaat tacatcgaat tctaatgggg
      121 gatcatatgt ttaaccgacc gaaccgcaac gacgttgatg atggcgtgca ggatatccag
      181 aatgatgtca atcaattagc tgacagcctc gaatctgtat tgaagtcctg gggcagcgac
      241 gccaaagggg aagctgaagc cgcacgcagt aaagctcagg cgttgctgaa agaaaccagg
      301 gcgcgaatgc atggtcgtac tcgcgtccag caagccgcgc gcgatgccgt tggctgcgcg
      361 gattcttttg ttcgtgaaag accctggtgt agcgtgggta cagcagctgc ggtaggtatt
      421 tttatcggcg cactgttaag catgcgcaaa tcgtagtgca aaaatgataa taaatacgcg
      481 tctttgaccc cgaagcctgt cttcggggtt tctttttgcc tggtgaatca caaaaatccc
      541 cctcccccgt cacgctcata tccagggtaa tttcgatcac tatttgctat atattgtgta
      601 gttgaatctt ttttcaacta catctagtat ctctgtatca acagagagac aacccgacgc
      661 gtatcatcgc gccgtatctt cattttaaac ggaaatacga atcatgcgca taactattta
      721 cactcgtaac gattgcgttc agtgccacgc caccaaacgg gcgatggaaa accgggggtt
      781 tgattttgaa atgattaatg tcgatcgcgt tcctgaagca gcggaagcgt tgcgtgctca
      841 gggctttcgt cagttgccgg tagtgattgc tggcgatctt agctggtctg gtttccgtcc
      901 ggacatgatt aaccgtctgc atccagcgcc acacgcggcc agtgcatgag ccagctcgtc
      961 tacttctcca gcagctccga aaacacgcag cgttttatcg aacgtttagg tctgcccgcg
     1021 gtgcgcatcc cgctcaatga gcgggaacgg attcaggtag acgagcctta catcctgatc
     1081 gtgccctctt acggcggcgg cggtacggct ggcgcggtgc cacgacaggt aattcgcttt
     1141 ttaaacgacg agcacaaccg ggcgttgctt cgcggcgtta ttgcttctgg taatcgcaac
     1201 tttggtgagg cgtatggccg cgccggagat gtgattgccc ggaaatgcgg cgtgccgtgg
     1261 ctgtaccgtt ttgaactcat gggtacgcaa agcgatatcg aaaacgttcg taaaggagta
     1321 accgaatttt ggcaacgaca accgcagaat gcctgacgca ggaaacgatg gattaccacg
     1381 cgctgaatgc gatgcttaac ctctacgata gcgcaggtcg cattcagttc gataaagacc
     1441 gccaggccgt tgacgccttt atggcgacgc atgtgcgtcc gaacagtgtg accttcagta
     1501 gccagcagca gcgcctgaac tggctggtca acgaaggtta ctatgatgaa agcgttctta
     1561 atcgctactc tcgcgacttt gtcattacgc tgtttgccta cgcacacacc agcggttttc
     1621 gtttccagac attcctcggg gcatggaagt tttacaccag ctatacgttg aagacattcg
     1681 acggtaaacg ttatctggaa gattttgccg atcgagtcac gatggtggcg ctgacgctgg
     1741 cacaaggcga tgcgacgctg gcgttgcaac tgaccgatga aatgctgtca ggacgctttc
     1801 agccagccac gccgacattc ctcaactgcg gtaagcagca gcgcggcgaa ctggtttcct
     1861 gttttctgct gcgtattgaa gacaatatgg agtcgattgg ccgggcggta aattccgcac
     1921 tgcaactgtc gaaacgcggc ggcggcgtgg catttttgct gtcgaatctg cgagaagcgg
     1981 gcgcgccaat taaacgtatt gaaaatcaat cttctggcgt aattccggtg atgaaaatgc
     2041 tggaagacgc attttcctat gccaaccaac tcggcgcgcg tcagggggca ggtgcagtct
     2101 atttacatgc tcatcatccc gatattctgc gttttctcga tacaaaacgg gaaaatgccg
     2161 acgaaaaaat ccgcattaaa acactgtcgc tgggcgtggt gatcccggat atcactttcc
     2221 atctggcaaa agagaatgtg cagatggcgc tgttttcgcc ctatgacgtt gagcgagttt
     2281 atggcaagcc gtttgccgat atcgccatca gcgaacacta tgacgaactg gttgccgatg
     2341 aacgcatccg caaaaaatac ctcaacgccc gtgatttctt ccagcggctg gcagaaatcc
     2401 agtttgagtc cggctatccc tacatcatgt atgaagacac ggtaaaccgt gctaaccctg
     2461 tcgccgggcg cataaatatg agtaatctct gctcagagat tttgcaggtc aactgtgcct
     2521 cagagtatga cgagaatctc gactatgccc gcacaggcca tgatatctcc tgcaatttag
     2581 gttcgttgaa tattgcgcac accatggatt cccccgattt tgcccgcacg gtagagactg
     2641 ccgtgcgcgg tttaacggcg gtgtcagata tgagtcatat ccgcagcgtg ccgtccatcg
     2701 aagccggaaa tgccgcctca cacgccatcg gactggggca gatgaattta cacggctatc
     2761 tggcgcgaga aggcatcgct tatggttcgc cggaagcact ggatttcacc aatctctatt
     2821 tctatgccat cacctggcac gcactgcgta cctcgatgtt gctggcgcgc gaacgcggtg
     2881 aaaccttcgc cgggttcaaa cagtcacgtt atgccagtgg tgaatatttt agccaatatc
     2941 tgcaaggtaa ctggcagccg aaaacggcga aagttggcga actgtttgcc cgcagcggta
     3001 ttacgttacc tacccgtgag atgtgggcgc aactgcgcga cgacgtgatg cgctacggca
     3061 tttataacca gaatcttcag gcggtgccgc caaccggttc tatctcttat atcaaccatg
     3121 ctacgtcgag tattcatccg attgtggcga aagtagagat acgcaaagag ggcaaaacag
     3181 gacgcgttta ctaccctgcc ccgtttatga ctaacgagaa tctggcgctg tatcaggatg
     3241 cttacgaaat cggcgcagaa aagatcatcg acacctacgc cgaagcgact cgccatgtcg
     3301 atcaggggct gtcgctgacg ctgtttttcc ccgataccgc caccactcgc gatatcaaca
     3361 aagcgcagat ttacgcctgg cgcaagggta tcaaaacgct ctattacatt cgcctgcgtc
     3421 agatggcgct ggaaggcact gaaattgaag gctgcgtctc ctgtgcactt taaggaatat
     3481 ctatgaaact ctcacgtatc agcgccatca actggaacaa gatatctgac gataaagatc
     3541 tggaggtgtg gaatcgcctg accagcaatt tctggctacc agaaaaggtg ccgctgtcga
     3601 acgatattcc tgcctggcag acattaactg tcgtagaaca acaactgacg atgcgcgttt
     3661 ttactggcct gacgctgctc gacacgctgc aaaatgttat cggcgcgcct tcgctgatgc
     3721 cctatgcact cacgcctcat gaagaagcgg tattatcgaa tatcagcttt atggaagcgg
     3781 ttcatgcccg ctcttacagt tcgattttct cgacgctgtg tcagaccaaa gatgtcgatg
     3841 ccgcctacgc ctggagtgaa gaaaacgcac cgttgcagcg aaaagctcag attattcagc
     3901 aacattatcg cggtgatgat ccgctgaaaa agaaaatcgc cagtgtgttt cttgaatctt
     3961 ttttgttcta ttccggtttc tggctgccga tgtatttttc cagccgcgga aagctgacca
     4021 ataccgcaga tctgatccgt ctgattatcc gcgatgaagc agtccacggt tactacatag
     4081 gctataaata tcagaaaaac atggaaaaga tatctctggg acaacgtgaa gagttgaaga
     4141 gtttcgcctt cgatttgttg ctggaactct acgacaacga gttgcaatac agcgatgagc
     4201 tgtacgccga aaccccgtgg gctgacgatg tgaaagcgtt tctctgttac aacgccaata
     4261 aggctttgat gaatctgggc tacgaaccgt tatttcccgc agaaatggcg gaagtgaatc
     4321 cggcaatcct cgccgcgctt tcgccgaatg ccgatgaaaa tcacgatttc ttttccggtt
     4381 cacgtatagg aaattgaaaa actaagcgat acccctgtcc gcgccttat
//
LOCUS       DADKRT010000243         4398 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.248, whole genome shotgun sequence.
ACCESSION   DADKRT010000243 DADKRT010000000
VERSION     DADKRT010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4398
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.248"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            225..597
                     /locus_tag="JQ356_003945"
                     /pseudo
     CDS             225..597
                     /locus_tag="JQ356_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611434.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1159..2106)
                     /gene="icsP"
                     /locus_tag="JQ356_003946"
     CDS             complement(1159..2106)
                     /gene="icsP"
                     /locus_tag="JQ356_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease IcsP"
                     /protein_id="HAY4623877.1"
                     /translation="MKLKFLVLALCVPAIFTTHATTNDPLFIPDNISTDISLGSLSGK
                     TKERVYHPKEGGRKISQLDWKYSNATIVRGGIDWKLIPKVSFGVSGWTTLGNQKASMV
                     DKDWNNSNTPQVWTDQSWHPNTHLRDANEFELNLKGWLLNNLDYRLGLIAGYQESRYS
                     FNAMGGSYIYSENGGNRNKKGTHPSGERTIGYKQLFKIPYIGLTANYRHENFEFGAEL
                     KYSGWVRSSDTDKHYQTETIFKDEIKNQNYCSVAANIGYYVTPSAKFYIEGSRNYISN
                     KKGDTSLYEQSTNISGTIKNSASIEYIGFLTSAGIKYIF"
     gene            complement(3487..3639)
                     /locus_tag="JQ356_003947"
                     /pseudo
     CDS             complement(3487..3639)
                     /locus_tag="JQ356_003947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            3695..4387
                     /gene="ospZ"
                     /locus_tag="JQ356_003948"
     CDS             3695..4387
                     /gene="ospZ"
                     /locus_tag="JQ356_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     methyltransferase OspZ"
                     /protein_id="HAY4623878.1"
                     /translation="MISPIKNIKNVFPINTANTEYIVRNIYPRVEHGYFNESPNIYDK
                     KYISGITRSMAQLKIEEFINEKSRRLNYMKTMYSPCPEDFQPISRDEASIPEGSWLTV
                     ISGKRPMGQFSVDSLYHPDLHALCELPEISCKIFPKENSDFLYIIVVFRNDSPQGELR
                     ANRFIELYDIKREIMQVLRDESPELKSIKSEIIIAREMGELFSYASEEIDSYIKQMND
                     RFSQIKARMSVT"
BASE COUNT         1352 a          862 c          848 g         1336 t
ORIGIN      
        1 gatctggttc aacaatatgc agatggtaca caacctcttt aaccagccca tccggattat
       61 tcagagccct tccgcaatcc ggaataaaag tgctgtttta ccgtgaaccc tctgaaaatc
      121 agcgagcagt gttttaacca gccgacgttc agagcgtact gacagacggt ggacaatttg
      181 aataaacagt tcaatcagac cgtagatgct ctcccgttgg cgacatgctg ggagcggtgg
      241 aacaccgctt cggcaacgag cttccggcgt ctccagtgaa gtgactgacg gataatggtt
      301 catgctaccg ggctaatgaa acacgccagt tcacccggat gttgggactt tgttgaaccg
      361 aagaacacgg cggtgcggag tccggagagt aacagaatag caaagagctt cgtgaaaaca
      421 ataaagtgtg actacatcag tatcatgccc aaacctgacg ggttaacggc agcaaagaac
      481 cttgcagagg cattcgagca ttataacgaa tggcatccgc atagtgcgct ggattatcgc
      541 tcgccacggg aatatctgcg gcagcgggcc aatgataaca ggtgtctgga aatatagggg
      601 caaagccacc cacgaacgat ccagcatata atcaagaaat tagatttcat ttaacataag
      661 atagattatg tgcaccaaga ggcatttcct taatttctga atttacaggc tcttttgctc
      721 tctttgctat gctgtggatt tggaaagata gagtgctggc tgattattta ggtattttca
      781 tcagcatgtc cctgatagca ctgttccatc agcgctttca ggcgataata gtagaccttg
      841 ggtagcctct gctcatgtgt aacttgatac cccgagaaca gccacgatga tctaagcggt
      901 tcttatttct ccggtctcag ggtcggtaat gccaacagta agtccacagt aatcaacgaa
      961 gagttttttg aaccgccccg gaaatcctgg agactaaacg ccctgagaaa gaggtaaaca
     1021 gaatgactaa aaatacacgt ttttcccccg aagtccgtca acgggcagtt cgtatggttc
     1081 tggaaagtca gggcgaatat gactcacaat gggcggcaat ttttagccat gaaaacgtaa
     1141 tcaactcggt gaaccaattc aaaaaatata ctttatacct gcggaagtga gaaaaccaat
     1201 atattcaata cttgcactat ttttaatggt gccagatata ttggtacttt gctcataaag
     1261 agatgtatca ccttttttat tagaaatgta atttctggag ccttctatat aaaattttgc
     1321 actgggggtg acatagtatc caatattcgc agcaacagag cagtaatttt ggttttttat
     1381 ttcatcttta aaaattgtct cagtctgata gtgtttatct gtatcagatg aacgaaccca
     1441 accactatat ttcagttctg ctccaaactc aaaattctca tggcggtaat tagcagttaa
     1501 tccaatataa ggtattttga agagctgttt gtaacctatt gttctttcac cactaggatg
     1561 tgtccctttt ttattcctgt tccccccgtt ttcactataa atataactcc ctcccattgc
     1621 attaaaactg taacgactct cttggtaacc tgctattagt ccaagtcgat aatccaaatt
     1681 atttaataac caacctttaa gattcagctc gaattcgtta gcatcacgga gatgcgtatt
     1741 gggatgccag ctctggtcgg tccatacctg aggggtattg gaattgttcc agtctttatc
     1801 aaccatgctt gctttctggt tacctaaagt agtccaaccg gaaactccga aagacacttt
     1861 tggaattagc ttccaatcga tgccacctct aacaatagtc gcattactgt atttccagtc
     1921 cagttgacta atttttctcc ccccttcctt gggatgataa acgcgttctt ttgttttgcc
     1981 actcagagat cctagactaa tatccgtact gatgttatcc ggtatgaaaa gtggatcgtt
     2041 agtggtagca tgtgtagtaa agatcgcagg tacacaaagt gcaagtacaa ggaattttaa
     2101 tttcatcgag aactctactt ttttggttga aatgtccatg atcttcttac tttataagat
     2161 aaacgtcaat gccaagcatt attttaatta aatatttgtt tatgttacca agaacatatc
     2221 ttttattata atatttattg aacttttgta aaaataaaaa aatacctcat tgtgcgaata
     2281 aagtaacggg ggccatagat ttctctacct accttttggt gttcatacct gaggctgata
     2341 gtttcaggat tccgcgacaa ttctactcac cttcttgttc tctcgccaat atgaaatcaa
     2401 tcagaaaagc gttccataag aacaacgata agacaataaa ttgtcatcac ggctgcaata
     2461 gccaacgtgc ctttcagtac caacatgaca acctcctgta tttgacgtaa cgtgtgctga
     2521 taaatatgta tttgtatctc aactgactca atacaacact taagtatagt ttttcagatt
     2581 ttgtttttcc cgtgaaatat tatggaaatg gcagaagcaa tacattgaat tccgattcga
     2641 gtgaatacgg ctagcgggca cctcacttta gcactgaagc catcaacttt tatttgactt
     2701 atttcaatgg aaagctttct cactatcagt acaggtaatt cccatccttt taaagtcgag
     2761 agtcagactg cgactaatac agttaaagtg accaaactca gttatcctct acacatttta
     2821 cctcatgttt acttggacaa ttcattggtg cttttataaa agaataaata ttctactaat
     2881 ttaatgcatc acctaaaata gtatttttta taatagaact gtatctatag tatattatta
     2941 aagcttaatt atttattatg ctttaatgtg gttgtccgat taaggactaa tccttgaaaa
     3001 cgccgtatag ggcgggagtt cactctattg cgataacgta accgtacaat attgtgcgtt
     3061 tcccaaattg accactactg aactattctg ggatttaaat gcaataaaat ggttggttga
     3121 aggtcgtggt gatgatgtta gtccttttga gaatattcca gtgccagatc ttacttataa
     3181 taaagaggct tggcagtttg gataagctat tgtccttatt ccactaatac aaactttttg
     3241 taaagtatat taaatatact tcatttcata ctgaaatccc cggaagtatt caatcaaaca
     3301 attacaccat aaaaggaaga gggagcccca attaagttat caagcatgtt tatgatacct
     3361 gcagggtata aattttctgg ctgcaagcag acacatataa aacgtcttta ttgatcctac
     3421 ccacataata tggacgcagt cgtaagtgag gctctgtgag cctacccacg taatatggac
     3481 acaggcctaa gcgaggttct ggttttcaaa ttgttccgga ctgaggccac cacaccaacg
     3541 gtgccgtcgc cagcgattgt aatcgcactc gatataatta aacactgttg cccgcactat
     3601 ttcccgatag ataaagtgtt ctccgtggag acattccact taggaacaat tatattgttc
     3661 atggtaatgt ttatatttga gtatagagat taaaatgatt agtcccatca agaatattaa
     3721 gaacgtattt ccaataaata ctgcaaatac tgaatatata gtgagaaata tttatcctag
     3781 agttgaacat ggttacttta atgaatcacc aaacatatat gacaagaagt atatctctgg
     3841 tataaccaga agtatggcac aattaaaaat agaggagttt attaatgaga aatccagacg
     3901 acttaattat atgaagacaa tgtattctcc atgtccggaa gattttcagc ctatttccag
     3961 agacgaagcc agtataccgg aaggaagctg gttgacagtt atatctggaa aacgtcctat
     4021 ggggcaattt tctgtggata gtttgtacca tcctgactta catgcattat gtgagctccc
     4081 agagattagt tgtaagatct tccctaaaga aaatagtgat tttttgtata taattgttgt
     4141 attcagaaat gattctcccc aaggagaact acgggcaaat cggtttatag aactatatga
     4201 tataaaaaga gagattatgc aagtgttaag agatgagtcg ccagagttaa agtctattaa
     4261 atctgagatt attattgctc gtgaaatggg agaacttttt agttatgcat cagaggaaat
     4321 agatagctac ataaaacaaa tgaatgacag gttttctcaa atcaaggctc gaatgtctgt
     4381 tacttaatgt atattaat
//
LOCUS       DADKRT010000244         4373 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.249, whole genome shotgun sequence.
ACCESSION   DADKRT010000244 DADKRT010000000
VERSION     DADKRT010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4373
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.249"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..100)
                     /locus_tag="JQ356_003949"
     CDS             complement(<1..100)
                     /locus_tag="JQ356_003949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HAY4623879.1"
                     /translation="MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVE"
     gene            complement(113..1894)
                     /gene="gcl"
                     /locus_tag="JQ356_003950"
     CDS             complement(113..1894)
                     /gene="gcl"
                     /locus_tag="JQ356_003950"
                     /EC_number="4.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate carboligase"
                     /protein_id="HAY4623880.1"
                     /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR
                     HILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG
                     QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
                     DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKTVEMLIQAERPVIVAGGGVINAD
                     AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG
                     IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ
                     EMQKAGRLPCRKEWVADCQQRKRTLLRKTYFDNVPVKPQRVYEEMNKAFGRDVCYVTT
                     IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQ
                     FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG
                     VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE
                     LDNVMEFEDIADNAVDAPTETCFMHYE"
     gene            complement(1984..2799)
                     /gene="allR"
                     /locus_tag="JQ356_003951"
     CDS             complement(1984..2799)
                     /gene="allR"
                     /locus_tag="JQ356_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor AllR"
                     /protein_id="HAY4623881.1"
                     /translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS
                     DISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVA
                     GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL
                     LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI
                     ASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP"
     gene            complement(2877..3359)
                     /gene="allA"
                     /locus_tag="JQ356_003952"
     CDS             complement(2877..3359)
                     /gene="allA"
                     /locus_tag="JQ356_003952"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HAY4623882.1"
                     /translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV
                     EILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL
                     STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
                     "
     gene            3589..>4373
                     /gene="allS"
                     /locus_tag="JQ356_003953"
     CDS             3589..>4373
                     /gene="allS"
                     /locus_tag="JQ356_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AllS"
                     /protein_id="HAY4623883.1"
                     /translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT
                     GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLL
                     YNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFS
                     LDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQK
                     EIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPT"
BASE COUNT         1118 a         1184 c         1043 g         1028 t
ORIGIN      
        1 attcaacgcc gcgaaaacca cactgcgcag ctttctcaaa acgggcgaga aaatcatatt
       61 caccaaataa catcgataaa ttagcagaga aacgtaacat tatttatctc ccttattcat
      121 agtgcatgaa gcaggtttca gtcggtgcgt ccactgcgtt atcggcgata tcttcaaatt
      181 ccatgacgtt atccagttcg ctgcccatcg aaatattggt cacacgctcg agaataactt
      241 ccacgactac cggtacccga tattgcgcca ttaaggcttt cgcctgttca aaggctggcg
      301 caatatcttc cggtttgaag acgcgaatcg ctttacaacc taaaccttcc gctactttta
      361 cgtggtcgac gccgtaaccg ttcacttcgc tggagttgat attctcgaaa gcgagttgca
      421 cgcagtagtc catgtcaaag gcgcgttgtg actgacgaat caggccgaga taggcgttat
      481 tcaccagcac atggatgtac ggaatgttga actgcgcgcc aacggctaac tcttcaatca
      541 ggaactggaa gtcaaagtcg ccagaaatcg ccaccacatt gcgtttcgga tcagcggcac
      601 aaacccctag cgcagccgga atcgtccagc ctaacggacc agcctgacca cagttgatcc
      661 agtggcggtc tttaaagaca tgcagcattt gtgccgcagc gatttgtgac agaccgatgg
      721 tggtgacata acaaacatcg cgaccaaagg ctttgttcat ctcttcatac acgcgctgcg
      781 gtttcaccgg cacgttgtcg aagtaggttt tgcgcagcaa agtgcgtttg cgctgctggc
      841 agtcggcgac ccattcttta cgacacggca gacgacccgc tttttgcatc tcctgcgcca
      901 cttcaaccag cagtgtcagc gccgctttag catcagagac aatgccgaga tccggacaca
      961 gcacgcgacc aatttgcgtc ggctcaatat cgatatgaac gattttgcgc ccttcggtgt
     1021 atttctctac cgaaccagta tgacggttag caaaacggtt accgatacca aacaccatgt
     1081 cggacgccag caacgttgcg ttaccgtaac gatgcgcggt ttgcagaccg accatcccgg
     1141 ccatcagttc atgatcgtcc gggatacagc cccagcccat cagcgttggg atcaccggaa
     1201 cgctggtcag ttcagcaaac tgttgtaaca gtgcagctgc gtcagcattg attaccccgc
     1261 ccccggcaac aatcaccgga cgttcggcct ggattaacat ttctacagtt ttttcgatct
     1321 gcatacggct ggcagcaggt ttgtagaccg gcagcggttc gtacatgtca ggatcaaact
     1381 cgatttccgc aacctgaacg tcgaacggta aatccaccag taccggaccc ggacgaccag
     1441 aacgcatcag gtgaaatgcc tgttgcagca cgcgaggcac cagcgccgct tcacgaactg
     1501 taaccgccat tttgctgacc ggtttagcaa ttgcttcaat atctacggcc tgaaaatctt
     1561 ctttatgcag acgggcgcgc ggtgcctggc cggtaatgca caaaatagga atggaatcag
     1621 cagaagcgga atagagcgcg gtgatcatgt ccgtgcccgc aggaccggaa gtccccagac
     1681 atacgccgat attccctgcc gttgcgcggg tataaccttc cgccatgtgc gaagcacctt
     1741 ccacatgacg cgccagaatg tgacgaatac cgccgtgctt acgcatcgct gagtagaacg
     1801 gattgattgc agctcccgga acaccgaagg cggtggtgat accttctttc tccagcacat
     1861 acattgccgc gtcaacggct ctcatttttg ccattttatt cctatctcta tttattggaa
     1921 aatttttcca actttcaaat tttgtcaaaa aaacccgctc cgcagagcgg gatgcgacag
     1981 acattatgga tgtgctttca gtcccaacgc cgtgctgata tcgcgggcgg tgtctctgac
     2041 cagctcaccc tgactgacaa aacgatcttc tgtcagtctt gatgaaggcc cggagatgga
     2101 gatagcggca acaacgctac cgacatcatc gtaaattgct gaagctatgc aattcagacc
     2161 tacaacatgc tcttctttat ctacggtata gcccagttca cgcgcttgtt ccaggtcctt
     2221 cagcaaggtg ggcatatcca caagcgtagt tggcgtaaac tgctgcaaac cggtttgcag
     2281 aatgatgctc atcaactcct cttccgccag cggataaagc agcgctttgc ccgcaccgga
     2341 agcatgcagc ggcagacgac tgcccagtgg cgcacacatc ctgaccattg atttacactc
     2401 taactgacca attaatactg cttcattgcc gttacggatc gcgacattga ccgtttcgcc
     2461 ggaaagtaac atcaggcggc gcataaacgg cccggcgacg gagaggacat cgcggttatg
     2521 gatgtacgcc gcaccgacgt taaagacacc taatcctata tgccaccagc ctaattgact
     2581 gtcctgatag acaaaatccg ctgcttgtaa aaccttcagc aagcgaaagg tcgtggagag
     2641 cggcaaatcc agattgagag aaatatcgct aaccgacgaa cttcccccac ttttttccag
     2701 atattgcaga atcgcaattc cccgctctaa cgcctgtgcg cccttctgtg ccacaggctc
     2761 cgcctgtcct ggcctgccgc gccgtctaac ttccgtcata cctacgttaa ctccgaccta
     2821 caagtgagca taaacaatga acaattagtt tatcttatgc aagtcggttg caggcgtcac
     2881 gcaaaacaga gttcctgttc aggaatactt tcaacatcac agttgtcact gccgccgcga
     2941 tcgatggtca gaaaatcggt gacgcgctgc caggcgaaaa gtgggtgatg ccagacgtta
     3001 cgatggtaat tcactccctg ttcgccgttg gtgataaacg cccgcagcgt tgacaggtct
     3061 ggtttgtcgt cgcctaacgc cacgaccacc acaaacactt cacctttcat cgggataaag
     3121 gcctgagtgc ccagcggatg acgttcgagt tcgtgaatgg tcagcggcag attcgccggt
     3181 tgcgcgcggt taatgctaat aagcgtacgg tcttgctcaa gaatctcaac cagcgccaaa
     3241 tcgtggtaac gctccaccag gccattgtta atatggaaaa aatcccgttg ctgagtttcg
     3301 attacgtcgc cataagcact aaaggcttcc tgacttaacg gtaatacctg aagtttcatc
     3361 tttttgtcct tgtaacataa ttccgttcaa ccaccgccga ccggtcagct tgggttcaat
     3421 aacaggcaat ctaaaacctt aagagaacaa catcaataca aaagttggaa tatttttcca
     3481 aaactagatt tagtccacaa attgaacagg gttatcatgt aaaaatactg ataaatcaga
     3541 ggataagaaa atcacgcaac ttgcggattt aaaaggggat acctgaagat gttcgatcca
     3601 gaaaccttgc ggactttcat tgcggttgct gaaacaggaa gtttttcaaa agcggcagaa
     3661 cgattatgta aaaccacggc gacgatcagt tatcgcatta aacttctgga agagaatacc
     3721 ggagtagcgc tgtttttccg tacgactcgt agcgtaacgt tgacagcggc tggcgagcat
     3781 ctactttccc aggccagaga ctggctgagc tggctggaaa gtatgcccag cgagctgcaa
     3841 caggtgaatg atggcgtgga acgccaggtg aatattgtca tcaacaacct gctctataac
     3901 ccccaggccg tcgcccagtt gctggcgtgg ctgaatgaac gttacccctt tacccagttt
     3961 cacatctccc gacaaatcta tatgggcgtc tgggactcgc tattgtacga aggtttttcg
     4021 ctggctatcg gcgtcacggg aactgaggcg ctggcaaata cctttagtct tgatccctta
     4081 ggatcggtgc aatggcgatt tgtcatggcg gcggatcatc cgctggcgaa cgttgaagag
     4141 ccgctaacag aagcgcagtt gcgtcgcttt ccggcggtca atattgaaga cagcgcccgc
     4201 accttaacca aacgcgtcgc ctggcgattg ccagggcaaa aagagattat tgttcctgat
     4261 atggaaacga aaatcgccgc ccatctggcg ggcgttggca ttggtttttt gccaaaatcg
     4321 ctttgccagt caatgatcga taatcaacaa ctggtcagcc gggtaatccc aac
//
LOCUS       DADKRT010000245         4351 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.250, whole genome shotgun sequence.
ACCESSION   DADKRT010000245 DADKRT010000000
VERSION     DADKRT010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4351
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.250"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..976)
                     /locus_tag="JQ356_003954"
     CDS             complement(<1..976)
                     /locus_tag="JQ356_003954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HAY4623884.1"
                     /translation="MIRKSATGVIVALAVIWGGGIWYTGTQIQPGVEKFIKDFNDAKK
                     KGEHAYDMTLSYKNFDKGFFNSHFQMQISFDNGAPDLNIKPGQKVAFDVDVEHGPLPI
                     TMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
                     AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLTRLE
                     EKKFPVGESESKFNQVNIINQGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLT
                     KGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEV"
     gene            complement(1131..1757)
                     /gene="dsbA"
                     /locus_tag="JQ356_003955"
     CDS             complement(1131..1757)
                     /gene="dsbA"
                     /locus_tag="JQ356_003955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HAY4623885.1"
                     /translation="MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEF
                     FSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG
                     VEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKA
                     AADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK"
     gene            complement(1774..2760)
                     /gene="srkA"
                     /locus_tag="JQ356_003956"
     CDS             complement(1774..2760)
                     /gene="srkA"
                     /locus_tag="JQ356_003956"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response kinase SrkA"
                     /protein_id="HAY4623886.1"
                     /translation="MNNSAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRIVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY
                     FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
                     EDATLIPSGLKAAFLKATDELIAAVTAHWREDSTVLRLHGDCHAGNILWRDGPMFVDL
                     DDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVY
                     YLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY"
     gene            complement(2837..3106)
                     /locus_tag="JQ356_003957"
     CDS             complement(2837..3106)
                     /locus_tag="JQ356_003957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HAY4623887.1"
                     /translation="MKCKRLNEVIEFLQPAWQKEPDLNLLQFLQKLAKESGFDGELAD
                     LTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE"
     gene            3176..3760
                     /gene="mobA"
                     /locus_tag="JQ356_003958"
     CDS             3176..3760
                     /gene="mobA"
                     /locus_tag="JQ356_003958"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HAY4623888.1"
                     /translation="MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALM
                     TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDT
                     PYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAF
                     MRLAGGHAVDFSDHKDAFVNVNTPEELARWQEKR"
     gene            3742..4269
                     /gene="mobB"
                     /locus_tag="JQ356_003959"
     CDS             3742..4269
                     /gene="mobB"
                     /locus_tag="JQ356_003959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418293.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HAY4623889.1"
                     /translation="MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHT
                     HHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKL
                     DLILVEGFKHEEIAKIVLFRDGARHRPEELVIDRHVIAVASDVPLNLDVALLDINDVE
                     GLADFVVEWMQKQNG"
BASE COUNT         1179 a         1033 c          972 g         1167 t
ORIGIN      
        1 caacttcatc gtttgctaac tcagggtgtg cagcaagctg cttctgcatc gcaatgttat
       61 actggatgat aaattggcgc actgctgagg gatcaataga ttcagcaatc aatgaccact
      121 caccactacc gagttgctga ttcccttttg ttaacttatc aagttcgtag gtcagattga
      181 cattgatata atctttgtct ttaacgcgat ccagcctggt ttttgcaacg aaagcatcga
      241 tttgggcaac gtcttccccc tgattgataa tattaacctg attaaatttc gactcgcttt
      301 caccaaccgg aaatttcttt tcttctaatc gtgtcagaga atcaatggta aaactttttg
      361 ccgttacttt gttcattggt gataattgca gaacaatatc ttcgactttg ccttcaatat
      421 ccaggttaga caatgaacta ccatcaccat taaaagtaaa ctggccctca ccaaaagaaa
      481 actttccata ctctgcaggg gcaacatcta atgtcgtaga gaatgagcca ccaaacgcga
      541 atcgcaatgt cgcttccacg ggcgatttat ttttcgcggc gataaatagc ggttgtgtca
      601 gttcattatt cactaagttc acttttgccg ctgccagtgc tgggatgaca ttaccatgca
      661 ttaacattgt gatgggcaac ggaccgtgct caacatccac atcaaatgca actttctggc
      721 ctggcttgat attgagatcg ggtgcaccgt tatcaaatga aatttgcatt tgaaaatggg
      781 aattaaaaaa gcctttgtca aagtttttat aacttaacgt catatcgtag gcatgttcac
      841 ctttcttttt agcatcgtta aaatctttaa taaatttttc gacaccaggc tgaatttgcg
      901 tacctgtgta ccatatgcca ccaccccaga ttacggctaa cgcaacaata acacctgtag
      961 ctgacttacg tatcatataa atattccctg ataaaacagc aaaactttga atatccactt
     1021 atgctgaaat aatgtccagc ggcaggatgt attatcagaa tgtatttata tttattaaat
     1081 aataaaaaaa gcccgtgaat attcacgggc tttatgtaat ttacattgaa ttattttttc
     1141 tcggacagat atttcactgt atcagcatac tgctgaacaa aaacatccat attgctggta
     1201 tccataccct gcggattcag ctgatattta ccgttaacaa acatcgccgg aacaccgcgc
     1261 aattgcacgt cagctgcagc tttttcctgc tgagctacca gagatttcac cacgaagctg
     1321 ttccacgccg cgtcgtactc ttcaccttta atacctgcgt tgataaatac atcgcggata
     1381 tcagaagcag aacgaatggt ctgggttttc tgtacgcctt caaacagcgg aacagtcact
     1441 ttgtcttcca cgcccagcgc catcgccaca gcccatgcct gagtcagatc tttgcccagg
     1501 tcaccaccca tgaagttgac gtggtattta gtcatcttca cgccttccgg cagttttttc
     1561 ttcacattat cagaaatatg cagaacttct tcaaactgat agcagtgcgg acagaagaaa
     1621 gagaaaaact ccagcacttg cggcgcgcca gctaccggtt tttccagggt agtgtactgt
     1681 ttaccatctt catactgcgc cgccgatgcg ctaaacgcta aaactaaacc agccagcgcc
     1741 agccaaatct ttttcatgat ctactctctc cgattaatac ataggtgtta attgtaaagg
     1801 gggttcttgt agaacttttg cctgttctat aaaagtcgcc gtttgtcgca gccagtaatc
     1861 ttccccggtt aaccacggga aatttttcgg gaacgcggga tcagcccaac gccgcattag
     1921 ccaggcaaga taataaacca aacgcatggc gcgtaaaggt tcaatcagtc cgatttcagc
     1981 ggtgtcgaac tcgctaaatt cttcataagc ttcaataata gtttccagtt gcatccgctg
     2041 ctcggcttta tcgccattga gcaacatcca caaatcctga atagctggac cattacgtgc
     2101 atcatccaga tcaacaaaca ttggaccatc gcgccagaga atattcccgg cgtggcagtc
     2161 tccatgtaag cgcagaacgg tggaatcttc ccgccagtgc gctgtaacgg cggcgatcag
     2221 ctcatctgtc gctttcagga atgccgcttt caacccggaa ggtatcagtg tagcgtcctc
     2281 aaacagcttg cgtggctcaa tgagatattc attcagaccg atggtcgggc gatggataaa
     2341 aagctgtttg cgccccgtct ggtgcatacg ccctaaataa cgcccaaccg cttccatctg
     2401 atcgatatta tcagcttcga actggcgacc accgacgctt ggaaaaacag cgaaataaaa
     2461 tccctgatga ttcaataaag tctgaccgtt aaaggccaca ggtgctgcga ccggaacttc
     2521 atcatttacc aactgcaacg caaattgatg ttcttcgagg atttgatcgg ctgtccaacg
     2581 ttcagggcga taaaatttga cgacaatacg tcgacgatct tcgtcctgaa attgatagac
     2641 acggttttca tagctgttaa gcggggtaag accggaatcc acccggatcc cttgctcaaa
     2701 tagagcatcc atgatggtat ccgggtgtag tgtctggaaa gtaaaagcgc tgttgttcat
     2761 cccatcatcc ggaaaacatt acgaatgatg aaggatatca tttcacgatg attttggtgg
     2821 cgccgcttac aagcttttac tctttaatta cgccgcgagc gcgtaacagc gccgttttga
     2881 agtcttcttc ataatctttc tgcaaacccg ggatcaccgc atctttcgcg gaatcacgca
     2941 ttttcaggtg atagatcaga atgtcatccg tcaaatccgc cagttcgccg tcaaaacctg
     3001 actctttcgc cagtttctgc aaaaattgca acaggttaag gtctggctct ttttgccagg
     3061 ctggctggag gaattcaata acttcattca gacgtttaca tttcatagtg atgctcctta
     3121 ctcttgagac agacacgtta gcagggtcaa tcccacaata aaagaggcga tatcggtgaa
     3181 tctgatgacg acgataacag gcgttgtgct ggcaggcggt aaagccagac gaatgggtgg
     3241 cgtagataaa ggattgcttg aattaaacgg caaaccatta tggcaacatg tcgctgacgc
     3301 gcttatgacg cagctctctc acgtcgtggt taatgccaat cgtcatcagg aaatctatca
     3361 ggcaagcggt ctgaaagtga ttgaagattc actggcggat tacccaggcc ctctggcagg
     3421 aatgctttca gtaatgcagc aggaagctgg tgagtggttt ttgttttgcc cgtgcgatac
     3481 gccttacatt ccccctgatt tagcagcccg gcttaatcat cagcgcaaag atgcgcctgt
     3541 cgtgtgggtc catgacggtg aacgcgatca cccgactatt gctctggtaa accgcgctat
     3601 tgagccttta ttactggaat atctgcaagc aggagaacgc cgggtaatgg catttatgcg
     3661 tctggctggc ggtcatgcgg ttgatttcag cgatcataaa gatgcatttg ttaacgtgaa
     3721 tacgccagag gagcttgccc gatggcagga aaaacgatga taccgttact cgcctttgcc
     3781 gcgtggagtg gtaccggaaa aactacgctt ttgaaaaaac tgatcccggc attatgcgcc
     3841 agagggatcc gtccagggct gattaagcat acgcaccatg atatggatgt tgataagcca
     3901 ggcaaagata gctatgagct gcgcaaggct ggcgcggcac aaaccatcgt tgccagccag
     3961 caacgatggg ccttgatgac ggaaacacca gacgaagaag agctggatct acagtttctc
     4021 gcaagtcgaa tggatacctc aaagctggat ttgattctgg tcgaagggtt taagcatgaa
     4081 gagatcgcaa agattgtgct gtttcgcgat ggagccagac atcgacctga agaattagtg
     4141 atagacaggc atgttattgc tgtagccagt gatgtgccgc ttaatcttga tgtcgcatta
     4201 ctggatatta atgatgttga ggggctggct gattttgtgg tggagtggat gcaaaagcag
     4261 aacggataag caagagtagg ctggatcaga cgcagccagt gtcgcatccg acctttttct
     4321 gcaccaacgc aaaaaggccc agtcttccga c
//
LOCUS       DADKRT010000246         4297 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.251, whole genome shotgun sequence.
ACCESSION   DADKRT010000246 DADKRT010000000
VERSION     DADKRT010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4297
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.251"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            49..2211
                     /gene="ybiO"
                     /locus_tag="JQ356_003960"
     CDS             49..2211
                     /gene="ybiO"
                     /locus_tag="JQ356_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001267224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel protein"
                     /protein_id="HAY4623890.1"
                     /translation="MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ
                     KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV
                     SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCAL
                     PLYRKMGLWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT
                     IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIHDETARYWSRRLSWLSSLIG
                     YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA
                     FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG
                     MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD
                     FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT
                     LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV
                     FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI
                     GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTL
                     RVSFTTLPLKQWTVRFALDSQVKKHFDLVGVRAPVQTY"
     gene            complement(2271..3197)
                     /gene="rlmF"
                     /locus_tag="JQ356_003961"
     CDS             complement(2271..3197)
                     /gene="rlmF"
                     /locus_tag="JQ356_003961"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HAY4623891.1"
                     /translation="MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV
                     DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP
                     ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLR
                     RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG
                     QQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV
                     KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR"
     gene            3473..3732
                     /locus_tag="JQ356_003962"
                     /pseudo
     CDS             3473..3732
                     /locus_tag="JQ356_003962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415327.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
     gene            3997..>4297
                     /locus_tag="JQ356_003963"
     CDS             3997..>4297
                     /locus_tag="JQ356_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HAY4623892.1"
                     /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL
                     VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPG"
BASE COUNT          998 a         1133 c         1077 g         1089 t
ORIGIN      
        1 ccagcatcta tacttatctt tttgctctgt tttctcactg gaggagtcat gcggtggatc
       61 ctgttcatcc tcttctgcct gctgggcgca cctgcccacg cggtatccat acccggcgtt
      121 acaaccacaa cgacaacgga ctcaacgact gaaccggccc cggaaccgga tatcgaacaa
      181 aaaaaagcgg cctatggcgc actggcggat gtgctggata acgacacctc gcgtaaagaa
      241 ttgatcgacc agttgcgtac tgtcgccgcg acgccccctg cggaaccggt cccgaagatc
      301 gtgccgccga cgctggttga agagcaaacc gtgctgcaaa aggtcaccga agtcagccgc
      361 cattatggtg aagccctttc cgcccgcttc gggcaacttt atcgcaatat taccggctcc
      421 ccgcataagc cgtttaatcc acaaacattc agcaatgcgc tgacccattt ttcaatgtta
      481 gcggtattag tgtttggttt ttactggctg attcgcctgt gcgcactgcc gctgtatcgc
      541 aaaatgggcc tgtgggcgcg gcaaaaaaat cgtgagcgca gtaactggtt gcagcttccg
      601 gcgatgatta tcggggcgtt tattatcgac ctactgttac tggcactgac attatttgtc
      661 ggccaggtat taagcgacaa cctgaatgca ggcagtcgca ccatcgcttt ccaacaaagt
      721 ttgtttctca acgcctttgc cctgattgaa tttttcaaag ctgtactacg cctgattttt
      781 tgcccaaacg tggctgaact gcgcccgttc acgattcatg acgagaccgc ccgttactgg
      841 agtcgtcgcc tgagctggtt aagcagtttg ataggttatg gcctgattgt ggccgtgccg
      901 attatctcta atcaggtgaa tgtacagata ggtgcgctgg cgaacgtcat cattatgctg
      961 tgcatgaccg tctgggcgtt gtacctgatc tttcgcaata aaaaagagat tacccaacat
     1021 ttgctcaact ttgcggagca ttcgctggcc tttttcagcc tgtttatccg cgcctttgcg
     1081 ctggtgtggc actggctggc aagcgcctat tttatcgtgc tgtttttctt ttcgttgttc
     1141 gatccgggca acagcctgaa atttatgatg ggtgcaacgg tgcgcagcct ggcgattatt
     1201 ggtatcgcag cgtttgtttc cggtatgttt tcccgctggc tggcgaaaac catcaccctc
     1261 tcgccacata ctcagcgtaa ctatccggag ttgcaaaaac ggctgaatgg ctggctttcg
     1321 gcggcgctga aaacggcgcg tattctgacc gtctgcgtgg cggtaatgtt gctgttgagc
     1381 gcatggggat tgttcgattt ctggaactgg ctgcaaaacg gcgcggggca gaaaaccgta
     1441 gatatcctga tccgtatcgc acttattctt tttttctcgg cggttggctg gacggtgctc
     1501 gccagtttga tcgaaaaccg gctggcttcg gatattcatg gccgcccgct acccagcgcc
     1561 cgtacgcgta ccctgctgac gctgtttcgt aacgcgctgg cggtgattat cagtaccatc
     1621 accatcatga ttgtgttgtc ggaaatcggc gtcaatatcg cgccattgct ggcaggtgcc
     1681 ggggcattag gtctggctat ctcgtttggt tcgcaaacgc tggtgaaaga tatcattacc
     1741 ggggtgttta ttcagtttga aaacggcatg aacactggag atttggtgac tatcgggccg
     1801 ttgaccggca cagtggaacg gatgtcgatt cgctccgtgg gcgtgcgcca ggataccggg
     1861 gcgtatcaca tcattccgtg gtcttcgata accacctttg ctaacttcgt ccgcggtatt
     1921 ggttcggtag tggcaaacta cgatgttgat cgccatgaag atgctgataa agccaatcag
     1981 gcactgaaag atgcggtagc ggaattgatg gaaaacgaag aaattcgcgg gctgattatt
     2041 ggtgaaccga attttgccgg gattgtcggc ttaagcaata ccgcgtttac actgcgtgtt
     2101 tcgttcacca cgctgccact caaacagtgg acggtacgct ttgccctcga cagccaggtg
     2161 aaaaaacatt tcgacctggt gggcgttcgc gcgccagtgc agacttatta ggtgctgcct
     2221 actccgggcg cgaccccggc tgaaccgtta ccgccggggg agccaacgct ttaacgctgg
     2281 cgattgacaa aacggcggcg ctgctcgtcg ttcataaagg tccaggcaat aaagcgactc
     2341 tgcttttgcc cctgggccat ctcttttttt accaccttca ccgcgcccac gtcggtcaga
     2401 gcacgataca acggcggtaa gttttcacca cgagatacca gcgaggtaaa ccacatcacc
     2461 tgcttcgcga agcctttgct ctcttcaatc atctttttga taaaggcgac ttcaccacct
     2521 tcacaccaca actcctgttg ctgaccacca aagttcagtg catcgtcttt gttcagcccc
     2581 aggttacggc gtttacgctc actacctgcc cgcgctgcag cggcggaatc gtggaatggc
     2641 gggttacaca aggtcgcgtc gtattgctcg tttttatgga tgatgccgtt aaaaattgcc
     2701 ccactctctt tttgccgacg cagacgaatg gcgcggttaa gccccggatt agcactgata
     2761 atcgcctgcg cactgcttaa cgcctggctg ctggtttcac taccggtaaa acgccagcca
     2821 tattcatgta cgccaatcag cggataaata cagttcgcac caacgccgat atccagaatg
     2881 ctggcattcg ctggaattgt tccgcttgct tcagccagta aatcggcaag gtgatgaata
     2941 taatccgccc ggccgggtac tggtgggcag agaaaaccgt cggggatatc ccagttcgct
     3001 acggcgtaaa aatgggccag caacgcctta ttgagcgcct tcaccgccag cggattggca
     3061 aagtctacgc tttgctcccc ggcgggtgta agcgtgagga attgcctgag ttcaggattg
     3121 acctgacaaa gcgtggcgag atcgtagcgg ctgtgatgac ggttgcgcgg atgcaacccc
     3181 ggtttctggg cggacatagc attctccttt aagcagcggc gtaagatacc cgcataacgc
     3241 gacagggtaa atatctggct gcgtttatca ttccccaaaa ccttaacatg gctatggttt
     3301 atggcaattc atcataaaaa tcagcattat gcatgtcatt gatttgtctt attttgtaaa
     3361 aatatatcgt tcaaaaaata agcacatctc tgtcaatttt ttgcgtcatt tgcatcgcgc
     3421 aggcgaccta cacttatcag gcactacccg ttgtatttat gaggatgtca ttatgaaaaa
     3481 gtgcctcaca ctactgattg ccaccgtcct gagcagaatc tctctcacgg cttatgccgc
     3541 gcaaccgatg agtaacctgg acagcggtca gctacggccc gcggtaccgt ttcggcaact
     3601 ggcgcatcaa acctaagcga tctggaggat aaactggcag aaaaagcgcg cgaacaaggc
     3661 gcgaaaggtt atgtcattaa ttccgcaggc ggaaatgacc agatgttcgg tactgcaacc
     3721 atctacaaat aaccccacca acgtaactgc attcgcctct ggatgcagtt ttcgcctgtt
     3781 ttgtaatcaa aaaacatcaa atatgaactc aatgtaaata aatgtatttc tttttcgcgc
     3841 aatgggtgat agaaaatcgc gccaagtgat aatgcttatc aaaattatta tcacttgcac
     3901 gaacactatc acgggattaa cagtggcatc gcatccgcag agatgctttc tcgtgacagt
     3961 gaaaatttca acatataaga aaaagtcacc tgcaaaatgg aaaacaatcg caatttccct
     4021 gccagacaat ttcattcgct cacgttcttt gccggtcttt gtattggcat cacgcctgtg
     4081 gctcaggcac tcgccgccga agggcaaact aacgcggatg acacgctggt tgtcgaagca
     4141 tcaacgcctt cgctttatgc gccacaacaa tctgccgatc cgaaattctc gcgtccggta
     4201 gcggatacta cccgcacgat gacggtgatt tctgaacaag tgattaaaga tcagggcgca
     4261 accaacctta ccgacgcgct caaaaacgtc cccggcg
//
LOCUS       DADKRT010000247         4267 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.252, whole genome shotgun sequence.
ACCESSION   DADKRT010000247 DADKRT010000000
VERSION     DADKRT010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.252"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(42..212)
                     /locus_tag="JQ356_003964"
                     /pseudo
     CDS             complement(42..212)
                     /locus_tag="JQ356_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
     gene            522..2294
                     /gene="aspS"
                     /locus_tag="JQ356_003965"
     CDS             522..2294
                     /gene="aspS"
                     /locus_tag="JQ356_003965"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HAY4623893.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
                     NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
                     DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
                     FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
                     EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANPTALAELSIQVVKKAENN"
     gene            2412..2864
                     /gene="nudB"
                     /locus_tag="JQ356_003966"
     CDS             2412..2864
                     /gene="nudB"
                     /locus_tag="JQ356_003966"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HAY4623894.1"
                     /translation="MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE
                     EGETAPQAAMREVKEEVTIDVVAEQLTLIDSQRTVEFEIFSHLRHRYAPGVTRNTESW
                     FCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA"
     gene            2893..3633
                     /locus_tag="JQ356_003967"
     CDS             2893..3633
                     /locus_tag="JQ356_003967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY4623895.1"
                     /translation="MAGHSKWANTRHRKAVQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMR
                     LIDMLEDCDDVQEVYHNGEISDEIAATL"
     gene            3668..4189
                     /gene="ruvC"
                     /locus_tag="JQ356_003968"
     CDS             3668..4189
                     /gene="ruvC"
                     /locus_tag="JQ356_003968"
                     /EC_number="3.1.22.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HAY4623896.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
BASE COUNT         1052 a         1058 c         1199 g          958 t
ORIGIN      
        1 tcaaccggct gttttaatgc ttcggcgtaa tcggcagatc agccaactcg caccagaaac
       61 acgggctgac cgctggcgcg aaatttcgcc gccagcttcc cggcgcgatt aactacctca
      121 tcggcagtat gtggaccacc ggcaaaaggt aagatgcctt cttgtaaatc gatcaccacc
      181 aacgcagtgg ttttagcatt aagttcaagc atgctgactc ctgaaaaaac aaaatcgtgc
      241 ctcacacctt aatgcgatta gccgatggcg gaacgacaaa ttttgttaat ttttatgagt
      301 tcgggcaaca cctttatagc aaactggcgt agagtctgat ttcaggcccg atataaagtg
      361 gtaacgaggc gttccagcgc gggctaggct cttacggtgc ggcagaattt ccagtataat
      421 agccgccttt tttcattcag ttgtgacata cagctaacgc tgcgacttgg tcacctgcgc
      481 agcagggggc atccgccggc agctaagtta agggatatct catgcgtaca gaatattgtg
      541 gacagctccg tttgtcccac gtggggcagc aggtgactct gtgtggttgg gtcaaccgtc
      601 gtcgtgatct tggtagcctg atcttcatcg atatgcgcga ccgcgaaggt atcgtgcagg
      661 tatttttcga tccggatcgt gcggacgcgt taaagctggc ctctgaactg cgtaatgagt
      721 tctgcattca ggtcacgggc accgtacgtg cgcgtgacga aaaaaatatt aaccgcgata
      781 tggcgaccgg cgaaatcgaa gtgctggcgt cctcgctgac tatcatcaac cgcgcagatg
      841 ttctgccgct tgactctaac cacgtcaaca ccgaagaagc gcgtctgaaa taccgctacc
      901 tcgacctgcg tcgtccggaa atggctcagc gcctgaaaac ccgcgctaaa atcaccagcc
      961 tggtgcgccg ttttatggat gaccacggct tcctcgacat cgaaactccg atgctgacca
     1021 aagccacgcc ggaaggcgcg cgtgactacc tggtgccttc tcgtgtgcac aaaggtaaat
     1081 tctacgcact gccgcaatcc ccacagttgt tcaaacagct gctgatgatg tccggttttg
     1141 accgttacta tcagatcgtt aaatgcttcc gtgacgaaga cctgcgcgct gatcgtcagc
     1201 ctgagtttac tcagatcgat gtggaaactt ctttcatgac cgcgccgcaa gtgcgtgaag
     1261 tgatggaagc gctggtgcgt catttgtggc tggaagtgaa gggcgtggat ctgggcgatt
     1321 tcccggtaat gacctttgcg gaagcagaac gccgttatgg ttctgataaa ccggatctgc
     1381 gtaacccgat ggaactgacc gacgttgccg atctgctgaa atctgttgag tttgcagtat
     1441 ttgcggggcc ggcgaacgat ccgaaaggcc gtgttgccgc tctacgtgtt ccgggtggcg
     1501 catcgctgac ccgtaagcag atcgacgaat acggtaactt cgttaaaatc tacggcgcga
     1561 aaggtctggc ttacatcaaa gttaacgaac gcgcgaaagg tctggaaggt atcaacagcc
     1621 cggtagcgaa gttccttaat gcagaaatca tcgaagccat cctggatcgt actgccgcgc
     1681 aagatggcga tatgattttc ttcggtgccg acaacaagaa aattgttgcc gacgcgatgg
     1741 gcgcactgcg cctgaaagtg ggtaaagacc ttggtctgac cgacgaaagc aaatgggcac
     1801 cgctgtgggt tattgacttc ccgatgtttg aagacgacgg tgaaggcggc ctgacggcaa
     1861 tgcaccatcc gttcacctca ccgaaagaca tgactgctgc agaactgaaa gctgcaccgg
     1921 aaaatgcggt ggcgaacgct tacgatatgg tcatcaatgg ttacgaagtg ggcggtggtt
     1981 cagtacgtat ccataatggt gatatgcagc agacggtgtt tggtattctg ggtatcaacg
     2041 aagaggaaca gcgcgagaaa ttcggcttcc tgctcgacgc cctgaaatac ggtactccgc
     2101 cgcacgcagg tctggcattc ggtcttgacc gtctgaccat gctgctgact ggcaccgaca
     2161 atatccgtga cgttatcgcc ttcccgaaaa ccacggcggc agcgtgtctg atgactgaag
     2221 caccgagctt tgctaacccg actgcactgg ctgagctgag cattcaggtt gtgaagaagg
     2281 cagagaataa ctgatatgac tcaaatacac gaaatcattc gcgttgcatc aaggcggcaa
     2341 ttgagtgaac tcccatgagc atagataact atgtgaatgg gatgagcgaa ggcagtcaac
     2401 gaagaggcag cgtgaaggat aaagtgtata agcgtcccgt ttcgatctta gtggtcatct
     2461 atgcacaaga tacgaaacgg gtgctgatgt tgcagcggcg tgacgatccc gatttctggc
     2521 agtcggtaac cggcagcgtg gaagagggtg aaaccgcgcc gcaagctgcc atgcgcgaag
     2581 taaaggaaga ggtcaccatt gatgttgtcg ctgaacaact gaccttaatt gacagtcagc
     2641 gcacggtaga gtttgaaatt ttttcacatt tacgtcatcg ctatgcgccg ggcgtgacgc
     2701 gtaatacgga atcatggttc tgtcttgcgc ttccgcacga gcggcagatc gttttcactg
     2761 aacatctggc ttacaagtgg cttgatgcgc ctgctgcggc ggcgctcact aagtcctgga
     2821 gcaaccggca ggcgattgaa cagtttgtaa ttaacgctgc ctgaacaggc agggctatct
     2881 ggagatattt ttatggcagg tcatagtaaa tgggccaaca ccagacatcg taaagctgtg
     2941 caggatgcta agcgcggtaa aatcttcact aaaatcattc gtgagctggt aaccgcggct
     3001 aagctgggcg gtggcgatcc ggacgctaac ccgcgtctgc gtgcggcggt ggataaagca
     3061 ctgtctaaca acatgacccg tgacacactg aaccgcgcaa ttgcacgtgg tgtgggcggt
     3121 gatgatgatg caaacatgga aaccatcatc tacgaaggtt acggtcctgg cggcacggca
     3181 atcatgattg aatgtctgtc tgacaaccgc aaccgtaccg ttgctgaagt gcgtcatgca
     3241 ttcagcaaat gtggcggtaa cctcggtaca gatggttccg tagcctatct gttcagcaaa
     3301 aaaggcgtga tctccttcga gaaaggcgat gaagacacca tcatggaagc agctctggaa
     3361 gcaggtgctg aagacgttgt gacctatgat gacggcgcga ttgatgtcta cactgcatgg
     3421 gaagaaatgg gtaaagtgcg cgacgctctg gaagcggcag gtctgaaagc agacagcgcg
     3481 gaagtttcca tgatcccgtc caccaaagct gatatggatg cagaaaccgc accgaaactg
     3541 atgcgtctga tcgatatgct ggaagattgc gacgacgtgc aggaagttta ccataacggt
     3601 gaaatctctg atgagattgc agcgactctc tgatgaggcc tgctaaacag caaaacggag
     3661 acgcgtgatg gctattattc tcggcattga cccgggttcg cgcgtgaccg gctatggcgt
     3721 catccgccag gtaggcaggc aactgtccta cctgggtagc ggatgcatac gcaccaaggt
     3781 ggatgattta ccgtctcgtc tgaagctcat ctatgcgggc gtgacggaaa tcatcaccca
     3841 gttccagcca gattatttcg ccattgaaca agtctttatg gccaaaaatg ccgactcggc
     3901 tctgaaactg gggcaggcgc gcggcgtggc gattgtggcg gcggtgaatc aggaattgcc
     3961 ggtatttgaa tatgcggcac gtcaggtaaa gcaaacggtg gtaggtattg gtagtgccga
     4021 aaaaagtcag gtgcagcata tggtccgcac cttgctgaaa ctgcccgcta atccacaggc
     4081 ggatgccgcc gatgcgttag ctatcgcgat tacccattgt cacgtcagcc agaatgcaat
     4141 gcagatgagc gaatcgcggc tgaacctggc gagagggcga ctgcgttaag ttataccgcc
     4201 tcggtcagtt caggctgagg cgtttcaact ccctccgcgt gaatcaacac caaacccgga
     4261 tgatgcc
//
LOCUS       DADKRT010000248         4232 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.253, whole genome shotgun sequence.
ACCESSION   DADKRT010000248 DADKRT010000000
VERSION     DADKRT010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4232
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.253"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..224)
                     /locus_tag="JQ356_003969"
     CDS             complement(<1..224)
                     /locus_tag="JQ356_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396230.1"
                     /note="mutations in this gene result in a compromised
                     ability for drug-inducible mexXY expression; expression is
                     inducible by the same ribosome-targeting agents that
                     induce mexXY; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HAY4623897.1"
                     /translation="MTSLFTEWYMGNYIRPLSDAVFTIASDDQWIESLAIQQLHTTAN
                     LPNMQRVVGMPDLHPGRGYPIGAAFFSVGR"
     gene            complement(443..895)
                     /locus_tag="JQ356_003970"
     CDS             complement(443..895)
                     /locus_tag="JQ356_003970"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4623898.1"
                     /translation="MNNIQIRDYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQI
                     DESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPLIK
                     SESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRYKQQH"
     gene            complement(892..1956)
                     /gene="dinB"
                     /locus_tag="JQ356_003971"
     CDS             complement(892..1956)
                     /gene="dinB"
                     /locus_tag="JQ356_003971"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HAY4623899.1"
                     /translation="MYKKVKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVI
                     STANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEP
                     LSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNK
                     PNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRF
                     GKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERR
                     LAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRL
                     VGLHVTLLDPQMERQLVLGL"
     gene            complement(2003..2773)
                     /locus_tag="JQ356_003972"
     CDS             complement(2003..2773)
                     /locus_tag="JQ356_003972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000640586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623900.1"
                     /translation="MIYSNQLRYTGKDGVYFHLRDNVDAFLTLSATENMEFDSPMQVT
                     TQNMQSGQTVTDNVQRAPRTITISGVVVVGESGSILISRDTKLVENFIDTLENWRDQK
                     QIISVICKDGIKIDDSIITSFKASKDVGISNGLRIQLTFQEINFKAIVGQTDISAATG
                     KTATTNDGGATSKKNTGNTTTSLGSPMLTCKELFSYSASELSDEALKARVTCSKSVSV
                     KNGESTFTASANEQASKVLKSGNALRKYSVNPNKKGTY"
     gene            complement(2931..>4232)
                     /locus_tag="JQ356_003973"
     CDS             complement(2931..>4232)
                     /locus_tag="JQ356_003973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001130996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HAY4623901.1"
                     /translation="TGLDIAELQSQFAGFGASAKESMGIQGSEELFRNMIGYSRLMGR
                     SEEEIKRALTALSQMAGKGQIMAEELKGQLAEAVPGMVQVFAKATGKSEQELFDAMKK
                     GALKSADTLQKVTQELNKQITAKGGWKAISESTQAQLGNLKNSWNTTLDSIFRGSENG
                     LQDFTRSLTTLLNSLGGSGKSLGESLGSLMTSMSSGVDSLTDISYRVRAFFDEVTLAY
                     RGLTDEQKKVVDALGSGLINSLKVLAGVIAVNKVVGVTRSIYGLMTAITRLGQVADTT
                     ADNVNRKNGKPSRLNPMKMLLAGSAIYAGYERLASTPERMEAQAKLPELAKESGLKPA
                     FTMDDVKGWFNSAAMNLANFQHPELNNIKQDSALTSADIQSLRDEISALSKRIQEPVK
                     VSLGGEVAIKPDETSFMTFSSNIYDQYAEATLLSSSFPEDD"
BASE COUNT         1133 a         1005 c          873 g         1221 t
ORIGIN      
        1 aaacgaccaa cagagaagaa cgctgcgcca atcggatagc cgcgtccggg atgtaaatct
       61 ggcatcccca ctacgcgctg catgttgggt aaatttgccg tggtgtgtaa ttgttggatc
      121 gctaaactct cgatccactg gtcatcagat gcgatggtaa ataccgcatc ggataaggga
      181 cgaatataat tgcccatata ccattccgta aatagactcg tcatacttca agttgcatgt
      241 gttgcgactt gaattattga gagtaacaat taaaaaatca ggaaatggca gacgaatcca
      301 gggcaagaaa aaaataatta atcctggaaa ggtctgcaaa gagtcattga taaaggattt
      361 gtcatgattt acctccttgc agtttgtgga ataagaaaac gcgcacatac taggcttgcg
      421 ttattttcat tgcaagctgg atttaatgtt gctgtttata acgcatataa aaattaataa
      481 accactctcc ccgacattca acgcgttgct gcttaactgt ctgaaaacca taacgttcaa
      541 aaaagggttt tgcggttatg cttgcgtcca ccgtaagttc ggattcagac ttaatcaaag
      601 gttttaacaa agcgctggca accccacggc gggtgtattc agggtcaaca aataacatat
      661 cgatatagtg ttcaacgcag gtaataaagc cgaccagttt tgcattaatg actgcaaccc
      721 gcacttgtga tttcgcgagt ttctccttcc agcgagattc gtcaatctgc gcccaggcgg
      781 caatttgttg tggtgaataa tgctgactgg cagtcatcgt aaccgctcta atgaaaatag
      841 cgcatagttg ctgaaaatcg ccaggctgat agtctcttat ttgtatgtta ttcataatcc
      901 cagcacgagt tgtctttcca tttgcgggtc aagcaacgtc acatgcagcc ccaccagtcg
      961 cacaccgcgc ccgccgcggc gttcatccca ggttttacgc gcggtggcga ttaagtcagc
     1021 tttattcagc cgcggccaga cgtgctcctg agtggtttgc tgaaaatcat caaactttaa
     1081 tttcaccccc tggcgagcaa tcagtaaatc aggtttcacc tttgccagac ggcgttcaag
     1141 ttccggatac agccgctcga taatcgcttc acattcagac cagtggtgga tatcttccgc
     1201 catcgtgcgt tccacgccga cggattttcg caaccgttcg ctgttaacgt cgcgctcgtc
     1261 aatcccctga ctacgctccc acaaaatgcg gccaaatttg ccaaagcgtt taagcagcat
     1321 caccagatca cacttttgta catcaccgca ggttcgtagc cccatcgctt ccagttttgc
     1381 cgccgagact ttgccgacgc cggggatttt tgccagtggt aaggtttgta aaaatgccgg
     1441 aacttctgcc ggcgtaatca caaactggcc gttgggttta ttcatgtcgg aggcgatttt
     1501 ggcgagaaac tttacgggtg ccacgcccgc agacgccgtc agttgcagct cgttgaaaat
     1561 cgtctggcgg atttcctggg cgatgagggt cgcagaaccg tggcaatgga cgctatcggt
     1621 gacgtcgaga taagcctcat ccagtgacaa cggttcaata cgcgaggtgt agcgcgagaa
     1681 gatttcgcgg atatgatttg aggcttcttt gtaggcgtca aagcgccccg gaagcaaggt
     1741 gagatgcggg cataatttga gcgccatccc tgtcggcata gcgctacgta cgccaaattt
     1801 acgcgcggga taattggcgg tactgatcac cccccgacgt tcgcggctgc cgccaatagc
     1861 aatagggata tcgcgcaggg cgggattgtc gcgcatctcc accgccgcga aaaagcagtc
     1921 catatccaca tgaataatct tcactttctt atacaccctg tatatttata catgcaaaga
     1981 gattatacac acaaaagcaa aatcaataag tgcccttctt attcggattc acagagtact
     2041 tccgtaaagc attacccgac ttaagcacct ttgaagcttg ctcattagct gaggctgtga
     2101 aggtgctctc accattttta acgctaacgc tcttagagca cgttacacgg gcttttagcg
     2161 cttcatctga taactcactt gccgaatagc taaaaagctc tttacaggtc agcatagggc
     2221 ttccaaggct cgttgtagtg ttgccagtat tctttttact ggtagcacca ccatcattcg
     2281 tggtagcagt cttgccagtt gcagccgaaa tatcagtctg acccacaata gctttgaagt
     2341 taatttcctg aaaagttagc tggattctta gaccatttga aataccaaca tctttagagg
     2401 ctttaaagct cgtgataatg gaatcatcaa ttttaattcc gtctttacag atgaccgaaa
     2461 taatctgctt ctggtcacgc cagttttcca gagtgtcgat gaagttctcc accagcttag
     2521 tatctcgtga gataaggata ctaccggatt caccaactac aacgacacca ctaatagtga
     2581 ttgttctggg tgctctttgc acattatctg tgacggtttg ccctgattgc atgttctgtg
     2641 tagtcacctg catagggctg tcaaattcca tgttttcagt tgctgataag gttaagaagg
     2701 catctacatt atctcttaag tggaagtaaa cgccatcttt gccagtgtaa cgaagttgat
     2761 tagagtaaat cattaaattc tcctttgatt tcaaaggctt agtgtatttt aatcattttt
     2821 aaccaaacct ttgatatata agtattttct ctgttaagcg tgagctacgt gaaaaataat
     2881 ttttggtgtg ggtattaact ttgctttatt cacgtagcat tcgactatta ttaatcatct
     2941 tctgggaatg atgaacttaa tagcgtagct tctgcatatt ggtcgtagat attactgcta
     3001 aaggtcataa agctggtttc atctggttta atggcaactt caccaccaag tgaaactttc
     3061 acaggctcct gaatacgttt gctcaaagcg gagatttcat ctctcaggct ttggatatct
     3121 gcactcgtta atgctgaatc ttgcttaatg ttgtttaatt ctggatgctg gaagttagca
     3181 agattcatag cagcactatt aaaccaccct ttaacatcat ccatagtgaa agcgggttta
     3241 agtccagact ctttagccag ctctggtaat ttagcttgtg cttccattcg ttcaggtgta
     3301 gaagctaatc tttcataacc tgcatagata gcactaccag ctaatagcat cttcataggg
     3361 tttagtcttg atggtttccc attctttcta ttcacgttat ccgctgtagt atcagctacc
     3421 tgacctaatc ttgtgatagc agtcataagc ccgtaaatac ttctggttac accaacaact
     3481 ttattcacag caataacacc agccaagact tttaaactat taatcaagcc agaacctaaa
     3541 gcatcaacaa ctttcttttg ttcatcggtt aaaccacgat aagctaatgt cacctcatca
     3601 aagaatgctc tcactctgta actgatatcg gtcaggctat ccacaccact tgacatagaa
     3661 gtcatcaagc taccaagaga ttcaccaaga ctcttaccac ttccacctaa actgtttaaa
     3721 agcgttgtta ggcttcgtgt aaaatcttgc agaccatttt cagaacctct gaagatacta
     3781 tcaagcgtgg tattccaaga gtttttcagg ttccccagtt gtgcttgtgt gctttctgaa
     3841 atagctttcc agccaccttt agctgtgatt tgtttattca gttcctgagt gaccttctga
     3901 agagtatcgg cagattttaa agcccccttc ttcatggcat caaataattc ctgttcactc
     3961 tttccggttg ctttagcgaa tacctgaacc ataccaggaa cagcttcagc tagttgcccc
     4021 ttaagctctt cagccataat ctgaccctta ccagccatct gtgataatgc tgtcagtgct
     4081 cgcttaatct cttcctcact tcgacccatt aaacgagaat agccaatcat atttctaaaa
     4141 agctcttcag aaccttgaat acccatagac tctttagctg aagcaccaaa accagcaaac
     4201 tgtgattgca gttcagcgat atctaaaccc gt
//
LOCUS       DADKRT010000249         4169 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.254, whole genome shotgun sequence.
ACCESSION   DADKRT010000249 DADKRT010000000
VERSION     DADKRT010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4169
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.254"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(36..593)
                     /gene="ymfL"
                     /locus_tag="JQ356_003974"
     CDS             complement(36..593)
                     /gene="ymfL"
                     /locus_tag="JQ356_003974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YmfL"
                     /protein_id="HAY4623902.1"
                     /translation="MGKHHWKIEKQPEWYVKAVRKTIAKLPGGYAEAADWLDVTENAL
                     FNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDIEDVDNADINQR
                     LLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISE
                     SNDARECAAPGVVASIASGCGETNA"
     gene            complement(637..837)
                     /locus_tag="JQ356_003975"
     CDS             complement(637..837)
                     /locus_tag="JQ356_003975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY4623903.1"
                     /translation="MKAYWDSLTKEQQGELAGKVGSTQGYLRLVFNGYKKASFVLAKK
                     LEQCTSGAITKSDLRPDIYPKD"
     gene            928..1602
                     /locus_tag="JQ356_003976"
     CDS             928..1602
                     /locus_tag="JQ356_003976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HAY4623904.1"
                     /translation="MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGA
                     TKNIGDSMARHIEKCFDLPIGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGA
                     WKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHG
                     DDVIALMHDTGETTFKRLIEDGTQRYLKALHPNWPEPYIKINGNCSIIGTVIFSGKPR
                     RYKIKA"
     gene            3174..3710
                     /locus_tag="JQ356_003977"
     CDS             3174..3710
                     /locus_tag="JQ356_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416862.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HAY4623905.1"
                     /translation="MSFIQTLTGKKFNYINSTIDDIYIEDIAGALSNICRFAGHLPDF
                     YSVAQHSVLCSQLVAPEFAFEALMHDATEAYCQDIPAQLKRLLPDYKRMEEKIDAVIR
                     EKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPLLEGIPATEMFKVIPLSPGHA
                     YGMFMERFNELSELRKCA"
     gene            3701..4063
                     /locus_tag="JQ356_003978"
     CDS             3701..4063
                     /locus_tag="JQ356_003978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HAY4623906.1"
                     /translation="MRMNVFEMEGFLRGKCVPRDLKVNETDAEYLVRKFDALEAKCAA
                     LENKVIPVSTELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGDWQWTFQVGDLE
                     NVNITHWAVMPKAPEAGA"
BASE COUNT         1269 a          915 c          883 g         1102 t
ORIGIN      
        1 cagttgcgag cgacggtagt gtgttgttaa actgttcatg cgttagtttc tccacaacca
       61 gaagcaatcg acgccacgac gcccggagct gcacactcgc gggcgtcatt actttctgaa
      121 atgcaaaaaa ttttgtagac aagtgctgca tgctcctgca gcttcgaaat tgagagatac
      181 agctcgtcgt taattgctgt cttctcatgc ggttccacta caccgtcttc gattgctgaa
      241 cgaatctgtt ttgaataact gccgatctgt tcaatgactt ccagcagacg ctggttaata
      301 tcggcgttgt ccacatcctc gatgtcagga agagacacaa agacgccatt tgcagactgc
      361 gccacagcat cagcaatgaa gtgagtgcca ccagcacgct gtaaaaccat tgcccatccc
      421 agcgggaaaa tctgatcgcc atctgcacga aggcggttga ataaagcgtt ttctgttaca
      481 tcgagccagt cagccgcttc agcgtaacca cccggcaact ttgcgatagt ttttctgaca
      541 gctttcacgt accactcagg ctgtttttct attttccagt gatgcttacc cacgattagc
      601 ctcatcgttc tgtggttaaa aattgaaagt gttctgctaa tctttcggat agatatccgg
      661 tcttaagtca gatttcgtaa ttgcacctga cgtgcattgc tcaagttttt tagccagcac
      721 aaaactggct tttttatagc cattgaaaac cagccgtaag tagccttgtg ttgagccaac
      781 ttttccggcc aactcaccct gctgttcttt ggttaaagag tcccaatacg ctttcataca
      841 atatgtacct ccagtgtaca catcacatga ttgaaatgaa ccttcaagat acttgtacct
      901 tagcggtaca agggttttaa tttcgttatg aaaacaatcc atgacatccg gcggtctaac
      961 gccagaaaac tgagagatgg tgttggcggg aattcttcct ttgccactat gattgatcgc
     1021 gagccaaccc agaccagcag gtttatggga gatggtgcta ctaaaaatat cggtgacagc
     1081 atggcacgac acattgaaaa atgtttcgac ctgcctatcg gatggctcga tcaagaacac
     1141 cagacaacga acatcacaaa aaaacctgat gtttcaatca ctaacaaaca aataacgtta
     1201 gtccctgtca tatcatgggt acaggccgga gcatggaaag aagttggcta ttctgaggtt
     1261 gatttgagca cagcagaaac ttatccctgc cctgtaccct gtggcgaaat gacttatatc
     1321 ttgcgggtga ttggtgattc aatgattgat gagtaccgtc cgggagacat gatttttgtt
     1381 gatcctgaag tccctgcttg ccacggtgac gacgttattg cgttgatgca cgatacaggc
     1441 gaaaccacct tcaagcgatt gatagaagat ggaacacagc gttatctcaa agcattacac
     1501 ccaaactggc ctgagcccta cattaagatt aacggtaatt gctctataat tggcactgtg
     1561 attttctcgg gaaaaccaag aagatacaaa ataaaggcct aatcaatatt tatgaacctg
     1621 cttcggcagg tttttttata cttgacaatg taccccatgg acacacaatg tacccccatg
     1681 gacacacaat gtacccccat ggacacacaa tgtaccccca tggacacaca atgtaccaaa
     1741 acgaaacaac aaacaggcag gatgcccacg aagtagccgc ctggggcata tgaagtccaa
     1801 gatgattcgt tagcaacaaa acgcccatag gacgcttcgc tctttaacaa tttgaatatt
     1861 ttcagcgtca atgatctgtt tagctcccta caagtaaatg tagcgtagca ccatgataaa
     1921 tcctgctagt gtttagttaa aaatcgcgcg agagcaagaa cgacgtgagg gcaggcaata
     1981 ctgatagtgt tattgctatt agtttatcaa aaatatttag acgacccaga tgaatatttt
     2041 taatacatac tccccctaat ttaacaggag taaatgttga tgaataacga gacatctata
     2101 ctcaacaatt gtatgatatg aacaattata taacataatg taggaaaaat aaaaatggat
     2161 tggcatgacc ttatatcaaa ggtaattatc ggacttgtta caggctcaat cgcagcttac
     2221 ttaactgcgc gatatgcact cggccgttat tataaagaaa aatggtggga caaaagaata
     2281 gatttgtata cgtaattagt tgactgtgtt tatcttctaa aaaacacagc tgactattgg
     2341 tataaacatg agttacatca cgcttcacaa ttcccaacct actttagtta caaatcaaaa
     2401 gaagaaaatg aaatccttag caaatctttc tctaatgagc ttgaaaaact cagtagaata
     2461 ggtgagctat cttcattatt cttaacagaa gagtgtgggg ataaaatccg ttcattcatt
     2521 gaaaatgaag aaaatctatt tatacaatgg gtgtttgata gtatagagtt gatagatgcc
     2581 cacaagtcaa gacttgataa attaaaagta ttactagacg atattatctc tgaagcaaag
     2641 agagagctta aggtcaataa aaaacataac agcctaaaga atataaagtg gtccataact
     2701 atgccagacc aaaaaaatga tgagccaatt aattatcacg acaatcatta aaacacttta
     2761 gaacccgctg ggcgggttct attcaaatat actttgcaca tcacaaataa aactataacg
     2821 tccttcttct tttcctaata tcttatatct acttatttat aagcggctta cagatcttca
     2881 acagataaac ctaatgaagg cgacaatgtt ctgatgaata gccacctttt tactcaactg
     2941 aaagcgcgtt ctgtcccttg tcattaagtg ccagttcgtt aagtccaaaa cctccggaac
     3001 gcgctttcaa ttgagtgggg aaaataactg gcgatggcag ccgcccgttg cactaagtgc
     3061 ctctggatgg ggcatttact gaaacgaaac caaaactttt aatcgcctta tggcgaggga
     3121 ttcgtgcaac caaaaatcgt gcggtgcagc gcaccaatta aggagaacta acgatgagtt
     3181 ttatccagac tcttaccggt aagaagttca attatatcaa ctccaccatt gacgatattt
     3241 atatcgagga tatcgccggt gcgctttcaa atatctgccg cttcgcggga cacttgccgg
     3301 atttttacag cgtggcgcag cattccgttc tgtgcagtca acttgtggcg ccagagttcg
     3361 cctttgaagc gttaatgcat gatgcaacag aagcgtattg tcaggacatc cccgcgcaac
     3421 tgaaacgcct tcttcctgac tataaacgga tggaagaaaa aatagacgcc gtaatccgtg
     3481 agaaatacgg gttacccccg gttatgagca cgcccgtgaa atatgccgat ctcatcatgc
     3541 tggcaaccga acgccgcgat cttgggcttg atgatggctc tttctggcct ctactagaag
     3601 gtatcccagc aacagagatg ttcaaagtta ttccactgtc gccaggccat gcctacggga
     3661 tgtttatgga acgttttaac gaattatcgg agttacgcaa atgcgcatga atgttttcga
     3721 aatggaaggg tttcttcgcg ggaaatgtgt accgcgagat ctgaaagtga atgaaacgga
     3781 tgctgaatac ctggtgcgta aattcgatgc gcttgaagct aaatgtgcgg cactggaaaa
     3841 caaagtaata ccagtgtcaa ctgaactgcc accagcaaat gaaagtgttt tgttattcga
     3901 tgctaacgga gaaggctggc taattggctg gcgttctctc tggtacacct ggggacaaaa
     3961 agaaaccgga gactggcagt ggacatttca ggtcggggac cttgaaaacg tcaatatcac
     4021 tcactgggca gtaatgccaa aagcaccgga ggctggagca taatgaccac ttttaccgac
     4081 aaagaactga ttaaagaaat taaagagcgt atcagcagcc ttgacgtgcg agacgatatt
     4141 gagcgccgtg cttatgaaat cgcactcct
//
LOCUS       DADKRT010000250         4168 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.255, whole genome shotgun sequence.
ACCESSION   DADKRT010000250 DADKRT010000000
VERSION     DADKRT010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4168
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.255"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..933)
                     /locus_tag="JQ356_003979"
     CDS             complement(<1..933)
                     /locus_tag="JQ356_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001258873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623907.1"
                     /translation="MRTFTNMLYDICTVLGLFKEGENPAHKRKSTNFEMHQKFWDQRY
                     NEISRIIDAEGVFSQEQRRIIYARYEHFYYMMNSYPVHSTLKPEFLRSYCLRTFGVIF
                     LVVDMYNTYRPENDSAFYYHIYNFLQKSYCPCLDHADTESDEAAVKRYLREYLAELGF
                     NKEDFHENGKLYALGKYTGTIRKDNGKSKSLMQQYIMAIKNEYKKDYREKKLDKDELE
                     KVLRNIDKFYNAFYSLSVLLDIQRKTKILQSLAYYLRVLVREGLWIHGLYGYAAQYLY
                     DFTSFDTTPYAKKLLEMFYKFQNSAEGTLSRYSVS"
     gene            1034..1321
                     /locus_tag="JQ356_003980"
     CDS             1034..1321
                     /locus_tag="JQ356_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000070930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HAY4623908.1"
                     /translation="MSNQTGQLYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDP
                     TFPKPIRLGSASVGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP"
     gene            1293..2822
                     /locus_tag="JQ356_003981"
     CDS             1293..2822
                     /locus_tag="JQ356_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016231106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3987 domain-containing protein"
                     /protein_id="HAY4623909.1"
                     /translation="MMTTKLSLPELDTTKLPDRCQALLDEMHEETGIRREILLSVMLT
                     VMAASVQDTHEVELSGGQRTSLQIFMCLSSASGSGKTSACAKLIAPVHETEEELHQAY
                     IDDKKNYDRMMEMWTTDKKILERRYKKEIERSPENAAAARAALEKCIANKPEPPVQQV
                     LIVNDATPEGIALKLSQSPSLLLLSDEGGTILDKRFERKSALYNTLWSGQPVNVERAS
                     RPGFRLNDVRLTILILTQPVIFNKFFTLTGDQIRGNGFLARLLFCEPGAIKIMTTEPH
                     TATPVVTQQCASCFRKKSFGSQIRDSLRASRERRAKSKERICMTLSNAASRALERFHK
                     ENMDTVRQNPHMGTFEDIIVRKREQVVRIAALLELEKDPDSTVITLESTNSAIYLIEF
                     YFKHLIYKLESLREISPAEKLDKWLQKRIITTAGYIFQKSYILQYAPYALRKKCVLDE
                     ALDILAEQRKIRIDDNLVVYIGNTITPSELAKKLNIPAFDAGVFICDHQNILKYHRNR
                     L"
     gene            complement(2992..>4168)
                     /locus_tag="JQ356_003982"
     CDS             complement(2992..>4168)
                     /locus_tag="JQ356_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000279856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY4623910.1"
                     /translation="DDKPLPHGGITGLTLHPSSVKGRGKWVFRYVSPVTQKRRNAGLG
                     TYPEVSIAEAARTARIMREQLAAGDDPLEIKKAESEKVVIPTFADAARRVHAELSPGW
                     ENPKHVRQWLSTLENYAFPQLGAKTLDSITAADVAETLRPVWLTLSETASRVKQRIHV
                     VMQWGWAHGFCVANPVDVVDHLLPQQTRGRDEHQPAMPWRQLPLFVATSVYSDEPYNV
                     TRALLLMVILTATRSGEARGMRWAEIDFHKRVWTIPAERMKARLQHRVPLSRQAIYIL
                     ENIRGLHDELVFPSPRKQQILSDMVLTSFLRKKKAVSDIPGRVATAHGFRSTFRDWCS
                     EQGYSRDLAERALAHTLKNKVEAAYHRTDLLEQRVPMMQAWADYVMSQLAKNTKEFA"
BASE COUNT         1253 a          972 c          824 g         1119 t
ORIGIN      
        1 tgaaacacta taacgagaca atgttccttc tgcactgttt tgaaacttat aaaacatttc
       61 cagtaatttt tttgcataag gcgttgtatc aaagctggta aagtcataaa gatattgcgc
      121 agcgtaacca tacaaaccat gaatccagag tccttctctc accaacactc tgagataata
      181 tgcaaggctt tgaagtatct tcgtctttcg ttgtatatca agtaagacac ttaatgaata
      241 aaatgcatta tagaatttat caatattcct gagcactttc tccagttcat ccttatccag
      301 cttcttctcc cggtaatcct ttttatattc atttttgata gccatgatat attgttgcat
      361 caggctcttg cttttcccgt tatccttccg tatagttcct gtatatttcc ccagagcata
      421 cagctttcca ttttcatgaa aatcttcctt gttgaatccc agttcagcca gatattcccg
      481 aagataacgt ttaacagcag cttcatcgct ttctgtatca gcgtgatcaa gacaaggaca
      541 atacgatttc tgtaaaaaat tataaatatg ataataaaaa gcagagtcat tctctggtct
      601 gtatgtatta tacatatcta caacaagaaa aataacccca aaagtgcgca gacaatagct
      661 gcgaaggaat tcaggtttta gtgtggaatg cactggataa gaattcatca tgtaataaaa
      721 atgttcatat cgggcatata tgatccgccg ttgctcctga ctgaacaccc cttcagcatc
      781 aataatacga ctgatctcat tataacgttg atcccagaat ttttgatgca tttcaaaatt
      841 ggtactcttc cgcttgtgtg ccggattctc gccttcctta aacaacccca aaacagtaca
      901 aatatcatac aacatatttg taaatgtgcg catatgctgt gctctccggt tggtttgcat
      961 tttatcgcag aggacattct gagcttaacg tatcaaactg acacaacgac atgcaatgca
     1021 tatggagaac aatatgtcaa atcaaaccgg acagctttac acgccttcac gcatcctgcg
     1081 tatggctgaa cttacccgac tgctgggtat atcaagatct actatttacg tgaaaataaa
     1141 tccggcctcg aaataccacg accctacctt tcccaaacca ataaggcttg gtagtgcatc
     1201 cgtaggctgg cgggcatctg ccatcgatga gtggctgatg ttacatacgg caccagcctg
     1261 gtctgaacct gaaaacaaac taaaggaact taatgatgac gacaaaacta tcactccctg
     1321 aacttgacac aactaaactg cctgacaggt gccaggcatt acttgatgaa atgcatgaag
     1381 aaacaggaat acgccgtgaa atacttctgt ctgttatgct gacggtcatg gctgcctcgg
     1441 tccaggatac gcatgaagtt gaactttccg gagggcaacg taccagcctt cagatattta
     1501 tgtgtctttc atcagcatca ggcagtggaa aaacctctgc ctgcgcaaaa ttaatcgctc
     1561 ctgttcatga aacagaagaa gaactacatc aggcatatat cgacgataaa aaaaactatg
     1621 accgaatgat ggaaatgtgg acaacagata aaaaaatcct ggagcggaga tataaaaagg
     1681 aaattgaaag atccccggaa aatgctgctg ctgcacgagc agcacttgaa aagtgtatag
     1741 caaataaacc cgaacctccc gtacaacagg ttctcatcgt gaatgacgcg acaccagaag
     1801 ggatagcttt gaaactcagc cagtcaccct ctcttctgtt gctgtctgat gaaggaggta
     1861 ctattctgga taagcgtttc gaacgcaaat cggcactgta caacacatta tggagtgggc
     1921 aaccagtcaa cgttgaacgg gcatccagac ccgggttccg gctgaatgat gtccgtctca
     1981 ctatacttat actgactcaa ccggtaatat ttaataagtt ttttactctc actggcgatc
     2041 agatccgggg caatggcttt ctggcccggt tgctattttg cgaacccgga gcaattaaaa
     2101 taatgacgac agaaccgcat actgccactc ctgttgtgac gcaacaatgt gcaagctgtt
     2161 ttcgtaagaa aagttttggc agtcagatca gagactctct gagagcatcc agagaaagac
     2221 gtgcaaaaag taaagagcgc atctgcatga cattatcaaa tgcagcatcc cgcgcactgg
     2281 agcgctttca caaagaaaat atggatactg tcagacagaa tcctcatatg ggtacatttg
     2341 aagacattat tgtcagaaaa agagagcagg ttgtcaggat agcagcactt ctggaactgg
     2401 agaaagatcc agactcgaca gtaataacgc tggaaagtac taatagcgcc atttatctca
     2461 ttgaatttta tttcaagcat cttatatata aacttgaatc ccttcgggaa atatccccgg
     2521 ctgagaaact tgataaatgg cttcagaaaa gaattatcac aacagcaggt tacatattcc
     2581 agaaaagtta tattttacaa tatgccccat atgctctcag gaaaaaatgt gttctggatg
     2641 aagcacttga catactggcg gaacaaagga aaataaggat tgatgataac ctggttgttt
     2701 atataggaaa cacgattaca ccatccgaac tggcaaaaaa actaaatatt cctgcattcg
     2761 atgccggagt tttcatttgt gatcatcaaa acatactgaa gtatcaccga aacagactat
     2821 agatactatc ggacaaaaaa taaattatca caagtgtatt attcgttata ataatgaata
     2881 atcgttatct gagtgcaatg ccaggttttc attacgaact ggcattgcat ttatttttca
     2941 aaaaagaaag cagtaaccat ttggctactc tgagtatgcc agtccatgaa actaagcgaa
     3001 ttccttagtg tttttagcaa gttgagacat cacataatcc gcccatgcct gcatcatcgg
     3061 tacacgctgc tccagtagat cagtacgatg atatgccgcc tcaaccttat ttttcagcgt
     3121 atgagcgagc gccctttccg ccagatcccg cgaatacccc tgttcactac accagtccct
     3181 gaatgttgag cgaaaaccat gtgccgtggc aactcgcccc ggaatgtcac tgacggcttt
     3241 ctttttacgc agaaaacttg tcaacaccat atcggaaagg atctgctgct ttctgggtga
     3301 agggaacacc agttcatcat gcaggccacg tatattttcc agaatgtaaa tagcctgccg
     3361 ggataaagga acacgatgct gtagcctagc tttcattctt tctgcaggta tagtccatac
     3421 ccgcttatga aaatcaattt cagcccagcg cattcccctg gcttcgcccg agcgagttgc
     3481 tgtaagtatc accattaata acagtgcgcg ggtaacatta taaggttcat cactatacac
     3541 actggtcgcc acaaaaagcg gtaactgcct ccagggcatt gcgggttggt gttcatcacg
     3601 tcctcttgtc tgctgaggaa gcaaatggtc aaccacatca acaggatttg ccacacaaaa
     3661 accgtgcgcc catccccact gcataacaac atgaatgcgc tgtttaaccc ggcttgccgt
     3721 ttctgacaag gttaaccaga ctggacgcag tgtttctgcc acgtccgcag ccgtaatcga
     3781 atccagcgtt tttgctccca gttgaggaaa cgcgtaattc tcaagcgtcg ataaccactg
     3841 ccttacatgc tttggattct cccatccagg agacagttct gcatgtacac gcctggctgc
     3901 atcggcaaat gttgggataa cgactttctc agattcagcc tttttaatct ccagaggatc
     3961 atcacctgca gcaagttgct ctcgcattat ccgggcagta cgtgcagctt cagcaatact
     4021 gacctctggg taagttccca atccagcatt acgtcttttt tgtgtcaccg gacttacata
     4081 acgaaaaacc catttccccc gcccctttac tgaagaagga tgaagggtca gtccggtaat
     4141 tcccccatgg ggcaatggtt tgtcatca
//
LOCUS       DADKRT010000251         4142 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.256, whole genome shotgun sequence.
ACCESSION   DADKRT010000251 DADKRT010000000
VERSION     DADKRT010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.256"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..134)
                     /locus_tag="JQ356_003983"
     CDS             complement(<1..134)
                     /locus_tag="JQ356_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY4623911.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     R"
     gene            complement(249..324)
                     /locus_tag="JQ356_003984"
     tRNA            complement(249..324)
                     /locus_tag="JQ356_003984"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(289..291),aa:Thr,seq:ggt)
     gene            complement(331..405)
                     /locus_tag="JQ356_003985"
     tRNA            complement(331..405)
                     /locus_tag="JQ356_003985"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(370..372),aa:Gly,seq:tcc)
     gene            complement(522..606)
                     /locus_tag="JQ356_003986"
     tRNA            complement(522..606)
                     /locus_tag="JQ356_003986"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(570..572),aa:Tyr,seq:gta)
     gene            complement(615..690)
                     /locus_tag="JQ356_003987"
     tRNA            complement(615..690)
                     /locus_tag="JQ356_003987"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(655..657),aa:Thr,seq:tgt)
     gene            1052..2002
                     /gene="coaA"
                     /locus_tag="JQ356_003988"
                     /gene_synonym="panK"
     CDS             1052..2002
                     /gene="coaA"
                     /locus_tag="JQ356_003988"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HAY4623912.1"
                     /translation="MSIKEQTLMTPYLQFDRNQWAAQRDSVPMTLSEDEIARLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMT
                     LWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK"
     gene            complement(2031..2996)
                     /gene="birA"
                     /locus_tag="JQ356_003989"
     CDS             complement(2031..2996)
                     /gene="birA"
                     /locus_tag="JQ356_003989"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HAY4623913.1"
                     /translation="MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQYLLDRIGELK
                     SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEV
                     LRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESV
                     VNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPV
                     KLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK"
     gene            complement(2993..4021)
                     /gene="murB"
                     /locus_tag="JQ356_003990"
     CDS             complement(2993..4021)
                     /gene="murB"
                     /locus_tag="JQ356_003990"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HAY4623914.1"
                     /translation="MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVL
                     ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMP
                     GLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRD
                     SIFKHEYQDRFAIVAVGLRLLKEWQPVLTYGDLTRLDPTTVTPQQVFNVVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVSAETAKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKG
                     MQMGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE
                     VSAVETIS"
BASE COUNT         1074 a         1038 c          919 g         1111 t
ORIGIN      
        1 cgagcagcac cgccgtaggt tttagccagt acggtagtga ttgcagcggt cagcgttgtt
       61 ttaccatggt caacgtggcc gatagtaccg acgttaacgt gcggttttgt acgttcaaac
      121 ttttctttag acatcgattg tccctctaag acacggataa atcggtgata tcaccacatc
      181 aaccaggcaa catgcccgac ttgttgaatg caataaacag aaggaaaaaa cagggaggag
      241 aaaagaagtg gtgctgatag gcagattcga actgccgacc tcacccttac caagggtgcg
      301 ctctaccaac tgagctatat cagcacatct tggagcgggc agcgggaatc gaacccgcat
      361 catcagcttg gaaggctgag gtaatagcca ttatacgatg cccgcatcct ggaactcggc
      421 tacctgattt tcattctgca ctgaatatcg agagaagctc tctttattcg agccggtaag
      481 cgaacttatc gtctcgggct acgccatcgc gtggccgaaa ttggtggtgg gggaaggatt
      541 cgaaccttcg aagtctgtga cggcagattt acagtctgct ccctttggcc gctcgggaac
      601 cccaccggac ttgatggtgc cgactaccgg aatcgaactg gtgacctact gattacaagt
      661 cagttgctct acctactgag ctaagtcggc atcaagtagc gcgcattcta tggagacatg
      721 cgagttcatg caactaaaaa attgcataat ttgttttatt ggtcacattt tatgcgacac
      781 gatgaagaaa cagccgaatg gagggcagat tagcacactt tttcaacatc attgtgctca
      841 acaatgcgct cctgctaaac cataattctt cttatcagat ggaatatctg tcacattgct
      901 tttcaacgat agcttcctag gagagatttt ttcttattat tcctccccat ctggtgttac
      961 cctcctgccc attaacccat tcaacagaac tgtgacgcgc catggcaaat atcgctttgc
     1021 cgatagagct atgaccgcca gaaacatgct tatgagtata aaagagcaaa cgttaatgac
     1081 gccttaccta cagtttgacc gcaaccagtg ggcagctcag cgtgattccg tacctatgac
     1141 gttatcggaa gatgagatcg cccgtctcaa aggtattaat gaagatctct cgttagaaga
     1201 agttgccgag atctatttac ctctgtcacg tttgctgaac ttctatataa gctcgaatct
     1261 gcgccgtcag gcagttctgg aacagtttct tggtaccaac gggcaacgca ttccttacat
     1321 tatcagtatt gctggtagtg tcgcggtggg gaaaagtaca accgcccgtg tattgcaggc
     1381 gctattaagc cgttggccgg aacatcgtcg tgttgaactg atcactacag atggcttcct
     1441 tcaccctaat caggttctga aagaacgtgg tctgatgaag aagaaaggct tcccggaatc
     1501 gtatgatatg catcgcctgg tgaagtttgt ttccgatctc aagtccggcg tgccaaacgt
     1561 tacagcccct gtttactcgc atcttattta tgatgtgatc ccggatggag ataaaactgt
     1621 tgttcagcct gatattttaa ttcttgaagg gttaaatgtc ttacagagcg gaatggatta
     1681 tccacacgat ccacatcatg tatttgtttc tgattttgtc gatttttcga tatatgttga
     1741 tgcaccggaa gacttacttc agacgtggta tatcaaccgt ttcctgaaat tccgcgaagg
     1801 ggcttttacc gacccggatt cctattttca taactacgcg aaattaacta aagaagaagc
     1861 gattaagact gccatgacat tgtggaaaga gatcaactgg ctgaacttaa agcaaaatat
     1921 tctacctact cgtgagcgcg ccagtttaat cctgacgaaa agtgctaatc atgcggtaga
     1981 agaggtcaga ctacgcaaat aatttgcagg ggagcgaata ctcccctttc ttatttttct
     2041 gcactacgca gggatatttc accgcccatc cagggtttta ttattccatc ctgctcaagt
     2101 aataaagccc cctgtttgtc tattccgcgt gaaatgccaa atatttcttt atcaccaatg
     2161 ataagtttca ctgggcgatt aataaaatta tccagctttt cccagcgcga cagataaggt
     2221 gccaatcctt cttgttcgaa gagttccaac gcagcacgta attcacgtat tagcatggcc
     2281 gccaacgtat tacgatcgag attgatcccc gcttcctgca gcgtgatcca cccctgatta
     2341 acgacactct cttcaacacg gcgcattgcc atgttgatcc cggctccaat gactatttgc
     2401 gccgcatcgc cagttttgcc agtcagctcc acaagaatgc ctgccagctt gcgatcctgc
     2461 agatagaggt cattaggcca tttgacacga actttatctg ctcccagctt gcgtaatact
     2521 tccgccatca cgataccgat aaccagactt aaaccaatcg ccgccgccgg gccttgttcc
     2581 agacgccaga acatcgacaa atataagttt gcgccaaaag gcgaaaacca tttccgcccc
     2641 cggcgaccac ggccagcctg ctggtattct gcaacacagg catcgcccga tttaagctct
     2701 ccgatacgat caagaaggta ctgattcgtg gagtcaataa ctggcagcac ggctacacta
     2761 ccgccatcca gctgacccaa tatctgttca gcattaagta actggatggg ctcaggcagg
     2821 ctgtatcctt tacccggaac ggtaaagaca tcaacgcccc agtcacgcag tgtctgaatg
     2881 tgtttattaa tagccgcccg gctcattccc agcgtttcac ccaactgctc gccagagtga
     2941 aattcaccgt tcgctaacag ggcaatcaat ttcagtggca cggtgttatc cttcatgaaa
     3001 ttgtctccac tgcgctcact tcacctgatg caccaataaa gcggacttca ggctcaagcc
     3061 agacattaaa tttttcaccc actttttgtc ttacatggtg tgccagttgc accacatctt
     3121 cgctttttgc attgtcttca ttaatgagaa ctaacgcctg ttgacggtgc accgcagccc
     3181 cacccatttg catccctttt agctggcact gatcaataag ccaacctgct gccagtttta
     3241 ctgaaccacc cgcctggggg taatttggtg ctgttggaaa ttgcgccagt aatgctttag
     3301 ccgtttcggc agatacaaca gggtttttga agaaactacc ggcattgcca ttcacttttg
     3361 gatcagggag tttggtggtg cgcatatgac acaccacatt aaatacttgc tgtggcgtta
     3421 ctgttgtagg atccagacga gttaagtcac catacgttag tacaggttgc cactctttta
     3481 gcagacgcag acctacggct acaatggcga agcgatcctg gtattcatgt ttaaaaatac
     3541 tgtcgcgata gccaaaacgg cactctttgg cagttaagcg cacttgcttg cctgtcgcca
     3601 gttcaacaca atcaacataa gcgcaaactc gctgtaattc tacgccataa gcaccaatat
     3661 tctggatagg tgatgagccg acacaaccag gaattaatgc cagattttcc agaccaggca
     3721 taccttcctg caaagtgtat tttaccaggc gatgccagtt ttctccggct cctacatgta
     3781 aataccacgc atcaggttca tcatgaattt cgataccttt gatccggttg atgatcaccg
     3841 tgccgcgata gtcttccaga aaaagtacat tacttccttc acccagaata agaacgggtt
     3901 gtccttctgc ggttgcatac tgccaggcat tgagtaattg ttgttcgtct tcggcacata
     3961 caatgtgctg agcattatga tcaatgccaa atgtgttcca gggttttaag gagtggttca
     4021 tagctgcttt cctgatgcaa aaacgaggct agtttaccgt atctgtgggg ggatggcttg
     4081 tagttatgac gacagggaga gtttgtagaa acgcaaaaag gcccagtctt ccgaccgggc
     4141 ct
//
LOCUS       DADKRT010000252         4081 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.257, whole genome shotgun sequence.
ACCESSION   DADKRT010000252 DADKRT010000000
VERSION     DADKRT010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4081
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.257"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            33..932
                     /locus_tag="JQ356_003991"
     CDS             33..932
                     /locus_tag="JQ356_003991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4623915.1"
                     /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE
                     RLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVE
                     HAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI
                     GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVR
                     MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY
                     PHRRHAGSAFSLFIDRLKYKGAV"
     gene            1269..2882
                     /locus_tag="JQ356_003992"
     CDS             1269..2882
                     /locus_tag="JQ356_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415845.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY4623916.1"
                     /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA
                     KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA
                     VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA
                     WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ
                     KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL
                     TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMKQAPIAPIYQYTNG
                     RLIKPWLKGYPINNPEDVAYSRIMYIVKH"
     gene            complement(2933..3964)
                     /gene="ynaI"
                     /locus_tag="JQ356_003993"
     CDS             complement(2933..3964)
                     /gene="ynaI"
                     /locus_tag="JQ356_003993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low conductance mechanosensitive channel YnaI"
                     /protein_id="HAY4623917.1"
                     /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
                     VQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE
                     KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
                     KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN
                     SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV
                     YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD
                     NITPPEQGR"
BASE COUNT         1146 a          895 c          960 g         1080 t
ORIGIN      
        1 taaatgatta atagattgca tggagatact gaatgaagcg tgaagaaatc gctgatctga
       61 tggcgtttgt cgtcgttgca gaggagcgta gcttcactcg tgcagcagcc cgcctgagca
      121 tggcgcagtc agctttaagc cagatagtgc gtcgtataga agaacgattg ggattgcggc
      181 ttctgacgcg aaccacgcgc agcgttgttc caactgaagc gggcgagcat cttttgtctg
      241 ttcttggccc tatgttgcat gacatagatt cagccctggc atccctgagc gagctgcaga
      301 accgcccatc cgggacaata cgtattacta ctgtagaaca tgcagcaaaa acgatattgt
      361 taccagcaat gcgcacattc ctgaaatcgc atcctgaaat tgatattcag ctcaccattg
      421 attatggttt gaccgatgtc gtttctgaac gttttgatgc aggcgtccgt ctgggtgggg
      481 agatggataa agatatgatc gccattcgaa tcgggccaga tataccaatg gctattgttg
      541 gctcaccgga ttatttttct cgccgaagtg ttccaacgtc agtgtcacaa ttaatagatc
      601 atcaggcaat taatttgtat cttcccacat cgggtacagc aaatcgctgg agattaatac
      661 gcggtggacg tgaagttcgt gttcgcatgg aaggtcagct tttactgaat acgatagacc
      721 tgatcattga tgctgcaatt gatgggcatg gattggcgta tctaccttat gatcaggttg
      781 agcgggctat taaagaaaaa aaactgatac gtgttttgga taaattcaca ccagatttac
      841 ccggttatca cctgtactat ccacaccgtc gacatgctgg ctcggcattc tcattattta
      901 tagataggct gaagtataaa ggtgctgttt agcactactt gctgatacat taatttaatt
      961 tctctcttaa cgtattctca gttcctttca acgttttggt tattttttat tcttcgtaca
     1021 atggcgacag atgctgattt tgataccgaa aactggtttg aacgtgcgaa gcctgaacgt
     1081 agtattcggt gttctatgtg ctttgccgca ttttggcgtc gattatttac actaaatctg
     1141 atttaatata ttgatacata aaacatttta tgcttcctgt gtcacttttt tgatggaagt
     1201 tgtttgcatt tctttaaggc gaaacaaata attacgcatc aattttaatg tcggttagag
     1261 ggaaacttat gaagcactct gtttcagtca cgtgttgtgc gctgttggtc agcagcattt
     1321 ctctttcgta tgctgcagaa gttccgagcg gcacagtact ggcagagaag caggagctgg
     1381 tgcgccacat taaagatgag cctgcgtcgc tggatcccgc taaagccgtg ggcctgccag
     1441 agattcaggt cattcgcgat ctgtttgaag gactggtgaa tcagaacgag aaaggggaga
     1501 ttgtccccgg cgttgcgact cagtggaaaa gtaatgacaa ccgtatctgg acttttaccc
     1561 tgcgcgataa cgcaaaatgg gcggatggca caccggtaac ggcgcaagat tttgtctaca
     1621 gctggcagcg tctggtggac ccgaaaacgc tatcgccatt tgcatggttt gccgcgctgg
     1681 cgggaatcaa caacgcacag gcgattattg atggtaaagc tacgcctgac cagcttggcg
     1741 tcaccgcagt tgatgcccat accttgaaaa ttcagcttga taaaccgttg ccgtggtttg
     1801 tgaatttaac cgctaacttt gccttcttcc cggtgcaaaa agccaacgta gaaagcggta
     1861 aagagtggac gaaacccgga aatctgatcg gcaatggcgc ttatgttctt aaagaacgcg
     1921 tagtcaatga aaaactggtc gtggtaccga atacccatta ttgggataac gccaaaacgg
     1981 tactgcaaaa agtgaccttc ctgccaatta atcaggaatc cgcagccact aagcgttacc
     2041 tcgcggggga tattgatatc accgaatcct tcccgaaaaa tatgtatcag aagctgttga
     2101 aggatattcc ggggcaggtt tatacgccgc cgcagctcgg gacctattat tatgcgttta
     2161 acacgcaaaa agggccgacg gcagatcagc gcgttcgcct ggcattaagt atgacgatag
     2221 atcgccgcct gatgaccgaa aaagtgttgg gaacgggcga aaagccagcg tggcatttta
     2281 caccagatgt taccgccgga tttacgccgg aaccttcgcc gtttgaacaa atgagtcagg
     2341 aagaactgaa tgcgcaggca aaaactttgt tgagcgcagc tggttatggt ccgcaaaaac
     2401 cgctgaagct gacgcttttg tataacactt cagaaaacca tcaaaaaatt gcgattgctg
     2461 tagcatcgat gtggaaaaag aaccttggcg tagatgttaa attgcaaaat caggaatgga
     2521 aaacctatat cgatagccgt aacaccggca attttgatgt tatccgcgcc tcatgggtgg
     2581 gggattataa tgaaccctcc actttcctga cattattaac gtcaacgcat tcaggaaata
     2641 tttcacgctt taacaatccg gcatacgaca aagttctggc ccaggcatcg acggaaaata
     2701 ccgttaaagc gcgtaatgcc gattacaacg cggcagaaaa aatcctcatg aagcaagcac
     2761 cgattgcacc aatttatcaa tataccaatg gacgattaat caagccgtgg ctgaaaggtt
     2821 atcctattaa taacccggaa gatgtggcgt acagccggat tatgtatatt gtgaagcatt
     2881 gatgtgatgg gaactggcgt tacccttgtg gataacgcca gtgatgtctg atttagcgcc
     2941 cctgttccgg cggtgtaatg ttatccatat acagcgtctg gctggggaag gcaaagtccg
     3001 cgccgtgtga ctgcacaata tcgataatct tcaaataaac gtcttgttgt gcagcaagcc
     3061 attcagccca taccgtggtt ttggtaaagc aataaaccat aatattcaat gacgagtcgg
     3121 caaactggtt gaaataaacc agtaaggttt gtcgctggtc gatggccggg tgatttttca
     3181 gcatctcacg tacggcttcg acaataacgc ccacttttgc cgcatcctca taacgtaaac
     3241 caatggtcgt ggtaatgcgg cggttggtca ttcgtcctgg gttttctacg ctgatcgacg
     3301 aaaacagcga gttcggtacg tacaatggac gattatcaaa ggtcgtaatt ttggtaattc
     3361 gccagccaat ttccgctact gtaccttcga tatttctgtc cggtgaacgg atccagtcgc
     3421 caatactgaa aggacggtcg aaatagagca tgatcccgga aaagaaatta ctcagaatat
     3481 ctttaccggc cataccgaca gccagaccac caataccacc aaaggtcagc aagccagaaa
     3541 ggctcatgcc gaaatgttcg ccataaagca gaacaagcac cacaataatg gtgattttga
     3601 taatgcgcga cataatccgc gcactggtga tatcgcgacc ttttttaatc tgctgttttt
     3661 caaactgatt aatcagcaaa aatagcttaa tcgtcagaat aaccgcaatc agggacgtac
     3721 agataaaatc gataacgcct ggggtgataa atttgagttt atagttttct ataacataat
     3781 taataatgct accaacagca ctgataatta tggtgtagat taaaaattgc accgcatgga
     3841 ataaaaaacc ttttctttta cgatttccgc ggcgaaacca aaagctcatc agaatcaatg
     3901 ctgcgcagct accgaaaata atgaccagat taagcgcatt atttgtaaac agttcagcga
     3961 tcattgtttt atcaggctcc tccagataat tgtcgtcatg ccggaacccc ctggcggggc
     4021 tattttaccg cgacaattca ttcagatcat caatagtcag ggaaggaagt agcaacatta
     4081 g
//
LOCUS       DADKRT010000253         4071 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.258, whole genome shotgun sequence.
ACCESSION   DADKRT010000253 DADKRT010000000
VERSION     DADKRT010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4071
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.258"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            112..615
                     /gene="yeaK"
                     /locus_tag="JQ356_003994"
     CDS             112..615
                     /gene="yeaK"
                     /locus_tag="JQ356_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mischarged aminoacyl-tRNA deacylase"
                     /protein_id="HAY4623918.1"
                     /translation="MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
                     TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL
                     VNFRRTA"
     gene            complement(616..720)
                     /locus_tag="JQ356_003995"
     CDS             complement(616..720)
                     /locus_tag="JQ356_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416302.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623919.1"
                     /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG"
     gene            889..1335
                     /locus_tag="JQ356_003996"
     CDS             889..1335
                     /locus_tag="JQ356_003996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HAY4623920.1"
                     /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
                     WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
                     VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
     gene            complement(1292..2113)
                     /locus_tag="JQ356_003997"
     CDS             complement(1292..2113)
                     /locus_tag="JQ356_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY4623921.1"
                     /translation="MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLI
                     LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTC
                     CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKI
                     RTMVEMMAKGPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG
                     LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVSPQSAKPDPRQ"
     gene            2210..3406
                     /gene="nimT"
                     /locus_tag="JQ356_003998"
     CDS             2210..3406
                     /gene="nimT"
                     /locus_tag="JQ356_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005117270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-nitroimidazole transporter"
                     /protein_id="HAY4623922.1"
                     /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
                     SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
                     LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA
                     LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
                     FLGSNSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ
                     RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA
                     ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI
                     RSYPVL"
     gene            3446..3793
                     /locus_tag="JQ356_003999"
     CDS             3446..3793
                     /locus_tag="JQ356_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HAY4623923.1"
                     /translation="MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEI
                     TPSTELRKAFHGEVVDFTTFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQ
                     NHALVLADWLRSL"
     gene            complement(3815..4069)
                     /gene="yoaF"
                     /locus_tag="JQ356_004000"
     CDS             complement(3815..4069)
                     /gene="yoaF"
                     /locus_tag="JQ356_004000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing lipoprotein YoaF"
                     /protein_id="HAY4623924.1"
                     /translation="MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK
                     GGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
BASE COUNT          937 a         1040 c         1024 g         1070 t
ORIGIN      
        1 catgatgcgt ataaagcttc cgatgagcgt ttatatgtca ataagcagaa caaaaacagc
       61 cgttcatgat aaccttctgt ggttgtttgc ttgtaatctc aggagcgtga aatgactgaa
      121 atggctaaag gaagcgtgac gcatcagcgg ttaatcgctt tattatcaca agaaggtgct
      181 aacttccgcg tcgttaccca tgaagcggta ggtaaatgtg aagcggtgtc agaaattcgt
      241 ggcaccgctt taggccaggg agctaaggca ctggtatgta aagtcaaagg caatggcgta
      301 aatcaacatg ttctggcgat cctcgctgcc gatcaacagg ccgatctgag ccaacttgcc
      361 agccatatag gcggattacg cgcttcgtta gccagccctg ctgaagtcga tgaactcaca
      421 ggctgtgtct tcggcgcgat cccccctttc agcttccatc caaaactcaa actggttgcc
      481 gaccctctac tcttcgaacg atttgatgaa atcgccttca atgcagggat gctggataaa
      541 tccgttattt tgaaaaccac ggattatttg cgcattgcgc aaccagaact ggtcaatttc
      601 cgccgcactg cgtaactagc ctgtccgttc aataagcaga acggacaaaa ccagcacaac
      661 agcaatggca aaaaacgatg acgtgataat cagtgtctcg acgaacattt gatcgttcat
      721 agcatgcccc cgggagatag ctgttttcac gttattgtta gcgtgcacaa atggcagttt
      781 gatgacagtt cgcctgattt ttatgcaaaa aacgtaaaga ttttctactt ccttcctgca
      841 gcaagcgtaa agtaagcagg cttattattt tttggcaagg aaaccacgat gtttgatgtc
      901 actttgctga tcctgctcgg gttagctgcg ctgggcttta tcagtcataa caccactgtc
      961 gccgtttcaa ttctggtgtt gatcattgtc cgcgtcacac cgttaagcac ctttttcccg
     1021 tggattgaaa aacaggggct aagtatcggg ataatcattc tgacgattgg cgttatggcc
     1081 cccatcgcca gcgggacgct accgccctca accttgattc actcgtttct gaactggaaa
     1141 tcgctggtgg caattgcagt aggcgtgatt gtctcctggc tgggtgggcg cggcgtgacc
     1201 ttaatgggca gccagccgca actggtcgcc gggctgctgg taggcactgt tttaggcgtg
     1261 gcgctgtttc gcggcgtacc ggtcggcccg cttattgccg cgggtctggt ttcgctgatt
     1321 gtggggaaac agtagttaat cccgcaatat atcggcctgg cgtttgcccc aggcctttct
     1381 taaacatagt aataaaggcc gttgttgaat cataccccag cgtatgagca actttctgta
     1441 cagtatcgcc tttcactaat ccctgaagtg ccataatcag ctgtaactgc tgacgccact
     1501 ggcgaaaact caaccccgtc tcttttacga tcagtcgcgc aagattgcgt tcactcatcg
     1561 caaaaaagcc agcccattgc cctaatgacc cccactcgac gggccctttc gccatcatct
     1621 ccaccatcgt gcggatttta ggatgagaag aaacgggcag gtgcagctgt tgttgtggct
     1681 gctgagggag ttcatcaaac aggacctgta ttaatctgcg ggtcatcggc tcagcacgct
     1741 gagtcgtcgt cctgtttgcc agggttaaaa tcaattcccg gcataagggc gatattttca
     1801 atgtgcaaca tgttgtcggc attgtcactg cgctgggttc gataaacaga aaacagagtt
     1861 cagcgttagc tgtcacttga ttgctatgtt ccaccccgcc cggtatccaa accgcatatt
     1921 gcggcggcac catccacaaa gcattttcca ccgtacaggt aattgcacca tgtaatgcta
     1981 gtatcagctg tcctttgcgg tgctgatgta caggactggt taactcatcc gttccggcgt
     2041 gaatacaaaa tgcgaccgcg gcttcatggt gtcggtcggg ttcatagcca ttgagattca
     2101 acctgtgcat cattttgtcc gaatttagcg ataatttgtc attttagctt gattcaacat
     2161 aacaataaaa acggtaaggt acagcctcgt ttgtaacaat gagaagcata tgacctgttc
     2221 aacttcatta agcggcaaaa acaggattgt ccttatcgct ggcattctga tgattgccac
     2281 aacattacgc gtcaccttta ccggcgcagc accgttactg gatacgattc gttccgctta
     2341 ctcgctgacg acagcgcaaa ccggcttatt gaccaccctg ccattattgg cctttgcgct
     2401 aatctcacct ttggccgccc cggtagcgcg acgttttggt atggaacgta gcctgtttgc
     2461 cgcgttactt ttgatctgtg ctggtatcgc aattcgctct ctcccttcgc cttacttatt
     2521 atttggcggt acagcggtca ttggcggtgg gattgcatta ggcaatgtct tactgccagg
     2581 attaattaaa cgagatttcc ctcattccgt cgccagactt accggcgcat attccctgac
     2641 aatgggagct gcggcggcac ttggatcggc tatggtagtg ccgctggctt tgaacggttt
     2701 tggctggcaa ggcgcgttgc tcatgctgat gtgttttcct ctgctggctc tttttttatg
     2761 gctgccacag tggcgaagcc aacaacatgc aaatttgagt acctcgcgcg ccttacatac
     2821 tcggggtatc tggcgttcgc cgcttgcctg gcaggtcaca ttgtttcttg ggagcaactc
     2881 actggtctat tacgtgatta ttggctggct tccggcgatc ctcatcagtc acggctatag
     2941 cgaagcacag gcgggttcac tgcatggttt gctgcaacta gccacagcag ctcccggttt
     3001 gctgatccct cttttcttac atcatgtgaa agaccagcgt ggtattgcag cgttcgttgc
     3061 cttgatgtgc gcagtgggcg ctgttgggct ctgctttatg ccagcgcacg cgatcacctg
     3121 gactctgctt ttcggttttg gttccggcgc aacaatgata ctggggttga cgttcattgg
     3181 tcttcgggca agttctgcgc atcaggcggc ggcactctcg gggatggcac aatccgtcgg
     3241 gtatttgctg gcagcctgtg ggccgccgct aatgggtaaa atacacgatg ctaacggtaa
     3301 ctggtccgta ccactgatgg gtgttgcaat actttcacta ctgatggcga ttttcggact
     3361 ttgcgccggg agagacaaag aaattcgctc atatccggtg ctatagtgac gtgacaaatc
     3421 atgcgtgaaa gggagaacaa acacgatgaa tattcagtgc aaacgcgttt atgatccggc
     3481 tgaacagagc gatggttatc gcgtactggt cgaccgcctc tggccgcgcg gtatcaaaaa
     3541 aaccgattta gcccttgatg agtgggataa agaaatcacg ccgtcaacgg aactgcgcaa
     3601 agcctttcac ggcgaagtcg tcgattttac aacctttcgc gagcaatatc ttgcagaact
     3661 ggcgcaacac gagcaagaag gaaagcggct ggcggacatc gccaaaaaac agccgctgac
     3721 cctgctctac gcagcaaaaa acaccacgca gaaccatgcg ctggtgctgg ccgactggct
     3781 acgtagcttg tgattttagt acagcatccg gcggttattt ttcaccagcc ggatggtccc
     3841 gtcgccacaa tgcccattca tcaatcgttt caccgcccgg taatttgcaa ttgttgctga
     3901 ccccttgcgc tgtcgacact ggaatgagcg tcccgccctt ctgctggcaa tagaccgacg
     3961 ccggatttgc cataccaatc tgcggcggtt taggtgcttc tggctgagaa ggggttgaac
     4021 aaccagccag gaccagcaag caaggcagaa caaaactgat aattttcatt t
//
LOCUS       DADKRT010000254         4059 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.259, whole genome shotgun sequence.
ACCESSION   DADKRT010000254 DADKRT010000000
VERSION     DADKRT010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.259"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..1046)
                     /locus_tag="JQ356_004001"
     CDS             complement(<1..1046)
                     /locus_tag="JQ356_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HAY4623925.1"
                     /translation="MREINMLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQR
                     TEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKEL
                     IARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLK
                     KLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQEN
                     IIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQ
                     FRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVS
                     TQWTSFSTEENSRA"
     gene            1537..1665
                     /locus_tag="JQ356_004002"
     CDS             1537..1665
                     /locus_tag="JQ356_004002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA invertase"
                     /protein_id="HAY4623926.1"
                     /translation="MLIGYVRVSTNDQNTDLRRNALNCAGYELIVERMLGYGVYGR"
     gene            1908..2903
                     /gene="pgl"
                     /locus_tag="JQ356_004003"
     CDS             1908..2903
                     /gene="pgl"
                     /locus_tag="JQ356_004003"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HAY4623927.1"
                     /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN
                     AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
                     HLVAQDPAEVTTIEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
                     DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
                     PRGFNVDHSGKYLIAAGQKSHLISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
     gene            complement(2944..3896)
                     /locus_tag="JQ356_004004"
                     /pseudo
     CDS             complement(2944..3896)
                     /locus_tag="JQ356_004004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308823.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
BASE COUNT         1090 a          828 c          948 g         1193 t
ORIGIN      
        1 aatgcccggg aattctcctc ggtggaaaaa gaagtccatt gtgtagaaac ctcccgacga
       61 tctgcttcag gaaaccaggc tgccacagtt tcgggaagag gggggatctg aaagttctgc
      121 cccccttcag tgatgactct gatatggcgc gaatgtaaat tttgcggcaa catctggcgt
      181 aaaaacagtc tgttttggtc tgacagggaa atacgaaact gaggcccgtt aaaatttgga
      241 accgaagttt gctgtattaa gaatagcaga gtttgatctg ataaggggtt atttgcaatc
      301 tcaatagtta tatgaggatc taaacgaaaa agatttgtcg ggattgtagt tatttggttg
      361 ttttcaaaat aaaaaaatct tctcatgata atattttctt ggatgtttgg taagttgctt
      421 aatctattgc tatatgcaaa aagaagttgc agtctcctag gtaaaggggg cagttcagta
      481 agatggttgt gcgcaacctt aagtatctta agattagaag gcagagatgg aagagtttgc
      541 agttcgttgt tcctaacctc aagttttttt aaattcaagg gtaatgaagg cagtgtggat
      601 aacctattat actctgcgct tagtgatttg atggtgtctg gtaataacgg cagattctct
      661 aattgatttt cggacacatc caaagttatt agataatgtg gtaatgcaga tatatgtgtt
      721 aagaaattat ctcttgcaat aagttcttta atattttcag gtaaatcagt aaggatggtt
      781 aatttattac agctcacatc aagcttttta atgcaagcag ggagtacagg taacgaggaa
      841 agcgccaagg ctcgcaggtc cagtttatgc cccttagagg taagacatgc acgaagtctt
      901 cttaccgcct cagtacgctg ttcttccggt aacccctgtt tctcccaatc atcccattcg
      961 gacaaataat ggttggggga tgtaattgtg ctgatatgtg gaaataaaca ggatgaaata
     1021 tttctgagca tattaatttc tcgcatatgg atatggaatt agattgtgaa taaattgtat
     1081 ttaatgtatc tctcctaatg aggagggtgt ttcagaatat tcgccataag ggaatgagtg
     1141 ttatatcatg ctttctatcc tggtaaatat atttgctttt ttcgtatatt tggttcatct
     1201 ttttttgatg ttttacatat tcacaatgca gaggatttat accagaagac attagtcttg
     1261 agtaagatac tacaacatct ccaactattt tagccagcct gactacttga cttggtaata
     1321 tttgttgcta ataatcatgt ataaaataag cttatataca tagtaacttc agcaaaggat
     1381 ttagtaatga tccaaatcat atatcaatgt actgtttttt tctttaaaaa aacagtacat
     1441 tctattttat aatgactgtg tattcccatg gaaggagatc acccaattct cccccccgac
     1501 ttttgacgca gtgtcttgtt aacaggggga tttaccatgc ttattggcta tgtacgcgta
     1561 tcaacaaatg accagaacac cgatctacga cgtaatgcgt tgaactgtgc aggatatgag
     1621 ctgattgttg agcgaatgtt agggtatggt gtttacggtc gttgatatgg cgaacaaacg
     1681 cggggagcgt cacgctccct aaatggtcgc gaaaatatct gtggcattgt caaatttgtg
     1741 acggtgacta atattttaat gatatgccat tcgaaatggt gtgctaacgt attgatttaa
     1801 ttgtgacgcg atgttgtatt ttatcgcgtt ttgttgtctg tttttcattc gcttgatgtt
     1861 gctatttaca tgaaaaataa agaatttatt gtttttgagg tgtgtttatg aagcaaacag
     1921 tttatatcgc cagccctgag agccagcaaa ttcacgtctg gaacctgaat catgaaggcg
     1981 cactgacgct gacacaggtt gtcgatgtgc cggggcaggt gcagccgatg gtggtcagcc
     2041 cggacaaacg ttatctctat gttggtgttc gccctgagtt tcgcgtcctg gcgtatcgta
     2101 ttgccccgga cgatggcgca ctgacctttg ccgcagagtc tgcgctgccg ggtagtccga
     2161 cgcatatttc caccgatcac caggggcagt ttgtctttgt aggttcttac aatgcgggta
     2221 acgtgagcgt aacgcgtctg gaagatggcc tgccagtggg cgtcgtcgat gtggtcgagg
     2281 ggctggacgg ttgccattcc gccaatatct caccggacaa ccgtacgctg tgggttccgg
     2341 cattaaagca ggatcgcatt tgcctgttta cggtcagcga tgatggtcat ctggtggcgc
     2401 aggaccctgc ggaagtgact accattgaag gggccggccc gcgtcatatg gtattccatc
     2461 caaacgaaca atatgcgtat tgcgtcaatg agttaaacag ctcagtggat gtctgggaac
     2521 tgaaagatcc gcacggtaat atcgaatgtg tccagacgct ggatatgatg ccggaaaact
     2581 tctccgacac ccgttgggcg gctgatattc atatcacccc ggatggtcgc catttatacg
     2641 cctgcgaccg taccgccagc ctgattaccg ttttcagcgt ttcggaagat ggcagtgtgt
     2701 tgagtaaaga aggcttccag ccaacggaaa cccagccgcg cggcttcaat gttgatcaca
     2761 gcggcaagta tctgattgcc gccgggcaaa aatctcatct catctcggta tacgaaattg
     2821 ttggcgagca gggactactg catgaaaaag gccgttatgc ggtcgggcag ggaccaatgt
     2881 gggtggtggt taacgcacac taaccgctga tttaaccggc gcagtctctc ctgcgccggt
     2941 gtattaacct atctcctgta acgcatgtct ctggcgttcg acgatattgg tccacaaatt
     3001 gtctttatcg tcagtccaca aattaatcag caaggcaaaa aagcgttcag ctgccggaga
     3061 aagcacggca tctttgcggc gaataatccc caatgtccga cgtataacgg gttccaccag
     3121 tgggatacca ataatcgaag aatagggcgc atggggcatt gccagaccag gaagcgccga
     3181 aatccccagt cctgcctcca ctagtcctaa tgacgtcgaa agatgacgca cttcgtaaaa
     3241 ccagtccagc ttccagggct tgtcggccag ctgttgttct atcaacagtc ggttgccgct
     3301 ggaggagcgt acgccaatca ttttgtaacc cactaactcc tgccattcta caagctgctt
     3361 tttggccaat ggatggtcac gccgacaggc agcacgaacg gctcgttgac cagtggggta
     3421 aaatcaatgg atgaatttgt gacgttgttc atgtttatgc caaagtctga ttcgttacac
     3481 agcaccgatt ccatgcaatt attcgtgcct tgttccagaa tccgcacttt aatattggga
     3541 tacagctcat taaatttacc gattgccagc ggtaaaaaat aaaatactgc ggtcggaata
     3601 cacgctaacg tcaccatacc acgatgataa gcattcatat cacgaatatt aaaaagcgtt
     3661 tcatcgaatt tctttattaa ttcccgcgcc tccgggagca acctttttcc tgcttttgtt
     3721 aacgtaacct tgcgagttgt acgctcaaat agttgaatat gtaaatcttc ctccatcttt
     3781 tttattcttc gcgttaatgc aggttgcgta atattgagta atttagcggc attgttaaac
     3841 gaactggact ctgccagtat gacaaatgcc ttcatacttg ataattcatg cttcattatt
     3901 actccggaaa atggaagcga cgattttggg tggctggccg ttaaaaattt taactgcatt
     3961 tagccaactt aaattaatga aaaaatgtta ttaatcgttg agctaaagtc attagagatg
     4021 ctttgccctt aatgtaacca tatcgcaata agggtaatg
//
LOCUS       DADKRT010000255         3963 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.260, whole genome shotgun sequence.
ACCESSION   DADKRT010000255 DADKRT010000000
VERSION     DADKRT010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.260"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            90..272
                     /locus_tag="JQ356_004005"
     CDS             90..272
                     /locus_tag="JQ356_004005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623928.1"
                     /translation="MHQPVKQLIARKFGLSCGFAMSIDTEKIKVRFSQINAGDFLFRH
                     GIPLTFVVKVYPSWRN"
     gene            complement(477..1457)
                     /locus_tag="JQ356_004006"
     CDS             complement(477..1457)
                     /locus_tag="JQ356_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HAY4623929.1"
                     /translation="MENRKHRPTIGRTLNTNILNNTEEISAPVHVFTLNTGRKAKFTE
                     IKVDHDKVDTQTFVVEEVNGREQTALTPDSLKDITRTIRLQQFYPCIGIRTGDLIEIL
                     DGSRRRAAALLCKVGLRVLVTDDELTVSEAQHLAKDLQTSLEHNIREIGLRLVRLKEA
                     GMNQKQIAEREGLSAAKVTRALQAASVPKDFVSLFPVQSELTYADYRQLAELSERLRL
                     GDISIDEVVKNISPSIELITADDNLSEDEVKNSIMRLITKEMSSLLDSGVKDKAVVTL
                     LWKFDSKDKFARKRVKGRTFSYEFGRLPLEVQDKLDRMIALVLKDNLNSL"
     gene            complement(1457..2656)
                     /locus_tag="JQ356_004007"
     CDS             complement(1457..2656)
                     /locus_tag="JQ356_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HAY4623930.1"
                     /translation="MTSFEQLSKVAQRADKMLLALTKQIQEQKQEFQADVFYQVYSKS
                     AVAKLPKLTRASVDGAVGEMEAQGYQFEKRPAGTATKYALTIQNIIDIYAHRGIPKYR
                     DRYSEAYSIFIGSLKGGVSKTVSSVSVAHALRAHPHLLSEDLRILLLDLDPQSSATMF
                     LNYLHAVGLVDTTAPQAMLQNVSREELLEDFIVPSVIPGVYVMPASIDDAFIASNWDT
                     LCEEHLLGQNKHAILRENIIDKLKHDFDFILIDTGPHLDAFLKNAIAAADIMFTPVPP
                     AQVDFHSTLKYLARLPELVQIIEQDGCSCRLQANIGFMSKLANKSDHKYCHSLTKEIF
                     GGDMLDVSMPRLDGFERSGESFDTVISANPVTYVGSGEALKNARMAAEDFAKAVFDRI
                     EFIRANY"
     gene            complement(2978..3316)
                     /locus_tag="JQ356_004008"
                     /pseudo
     CDS             complement(2978..3316)
                     /locus_tag="JQ356_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(3383..>3963)
                     /locus_tag="JQ356_004009"
     CDS             complement(3383..>3963)
                     /locus_tag="JQ356_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY4623931.1"
                     /translation="FPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPS
                     GVGKTHLAIAMGYEAVRAGIQVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLI
                     IDEIGYLPFSQKEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLGR
                     ILHHSHVVQIKGESYRLRQKRKAGVIAEANPE"
BASE COUNT         1072 a          928 c          857 g         1106 t
ORIGIN      
        1 aatattacat catggtcgag tttcctgatt tcccgggccc agtaatgaga tgccccgcca
       61 gcctccatcg caacagtcat tttaggctgt tgcaccagcc agttaagcag ttgattgcga
      121 gaaagtttgg tctttcctgc gggtttgcca tgagcattga tactgaaaag ataaaagttc
      181 gttttagcca gatcaatgcc ggtgattttc tgttcagaca tggtatcccg cttacttttg
      241 tggttaaagt ttatccatca tggcgcaatt gaaggctgcc gtgaaagagg gggaagacta
      301 tctcatcggt tactgttaaa cggctaagag aaactatctt tttcaagcaa agaagatacg
      361 gtgaaacagg cgatttcacc gtgaaatact gttcaaaaaa aacgctaata aaagcaaaat
      421 ttcttttaaa acagccaatt aaaaactggt gagttgctgg cgaaaaactt gaattttcac
      481 agcgaattca gattatcttt tagtacaaga gcaatcatac gatctaactt atcctgaact
      541 tccaacggta atctgccgaa ttcatatgag aacgtacgtc cctttactcg ttttcgagca
      601 aatttatctt tactatcaaa tttccataac aaagttacaa ccgctttatc ctttactcct
      661 gaatcaagca atgaagacat ttccttggtt ataagccgca taatactgtt tttaacctcg
      721 tcttcagaaa gattgtcatc agcagtaata agctcaatac tcggcgagat attcttcaca
      781 acttcatcaa tagatatatc acccagcctc agtcgttcac ttaattcagc cagttgcctg
      841 taatcggcgt atgtcagctc agactgaaca ggaaaaagag acacaaaatc tttaggtacg
      901 gacgctgctt ggagggcacg agtcacctta gctgccgaca atccctctct ttctgcaatt
      961 tgcttctggt tcataccggc ctctttgaga cgtactaaac gcaacccaat ttcacgaata
     1021 ttatgttcaa gtgacgtctg caaatctttc gccagatgct gagcttcaga aacagtaagc
     1081 tcatcatccg ttacaagtac acgtaatcca accttgcata gcaaagctgc tgcccgacga
     1141 cgggaaccat ccaaaatctc aataagatcg ccagtccgaa tcccaataca tggatagaat
     1201 tgttgtaaac gtatagttct ggtgatgtct tttagtgagt ccggcgtcag ggctgtctgt
     1261 tcgcggccat tcacctcttc aaccacaaaa gtttgagtgt ccactttgtc atgatcaacc
     1321 ttgatctcag taaattttgc ctttcggcca gtattgaggg taaatacatg aactggagcc
     1381 gatatttctt cagtattatt caggatattt gtattcagcg tacggccaat agtcggtcgg
     1441 tgctttctgt tttccatcag tagttggccc ttataaattc aatacgatca aaaactgctt
     1501 tagcgaaatc ttctgctgcc atacgtgcat ttttcaaagc ttcaccactg ccaacataag
     1561 taacaggatt cgcagatatc acggtatcaa acgactcgcc gcttctctca aaaccatcaa
     1621 gacgtggcat tgaaacatca agcatgtcac caccgaaaat ctcttttgtc aggctatggc
     1681 agtatttatg atctgactta ttcgccagtt tcgacatgaa gccaatattt gcctgcaaac
     1741 ggcatgaaca tccatcctgt tcaataatct gtacaagttc aggtaaacga gccaaatatt
     1801 taagcgtgga atggaaatca acttgtgctg gcggcaccgg tgtaaacatg atatctgcgg
     1861 cagcaatggc atttttcaaa aatgcgtcca gatgcgggcc tgtatcaata aggatgaagt
     1921 cgaaatcatg cttcagctta tcaataatat tctcacgcaa tatcgcgtgt ttgttttgtc
     1981 ctaatagatg ctcctcgcac agagtatccc agtttgatgc aataaaggcg tcgtcaatag
     2041 aagccggcat aacataaacg ccagggataa ctgacggaac gataaaatct tccagtaatt
     2101 cctcacgact cacgttctgc aacatagcct gcggtgcggt tgtatcaacc agccccaccg
     2161 catgcaagta gttcagaaac atagtggctg atgactgggg atctaaatca aggagcagaa
     2221 tacgtaaatc ttctgacagc aggtgaggat gagcacgcag ggcgtgagct acggaaacac
     2281 tactcacggt tttagacaca ccgcctttta gactaccgat gaatatggaa tatgcctcac
     2341 tataacgatc gcgatattta ggaatgccac gatgtgcata gatatcgata atgttctgga
     2401 tggttaatgc atattttgtc gcggttcctg ctgggcgttt ttcaaactga tagccctgag
     2461 cctccatctc accgactgca ccatccacgc ttgcgcgcgt taattttgga agcttagcta
     2521 cagcagactt tgaatagact tgataaaaaa catcagcctg aaactcctgc ttttgctcct
     2581 gaatctgttt tgttagggcg agcaacattt tatctgcacg ctgcgcaacc ttacttaact
     2641 gctcaaaact agtcattccc cctccgtgct atgtaggttt ttaacttatt acaaaaaaaa
     2701 ctgcattagc agggtaatgc atgcaagtgc atattgtaca tgcttatatt aaaaatgcgc
     2761 gcattgctga tttattaatc atcggaatga atattactgt aagatagtat gcctttccgg
     2821 gagaaagacg ctgatttccc ccgaataatc cagttcacca ccacactccg gacaacagct
     2881 ttcttcaggc tccagatggt gtatttcgcg ggaaacatgt tccggtaacg gacggcgatg
     2941 acgtgactgt cgcaacaggc gggggtagtg cttccaatca gtagaacatg tgcttttcaa
     3001 tgaaggagcc gatgactttt tcgtggattt ccacggaacg cgagaagcag attgttttac
     3061 gtgccagccg cttgatgcgg gtgcggaggg tccggttgtt acgttcaata cgttgcgtga
     3121 agattttgcc ggtcaggtgt ttctccttcg gcacttctct ggcgtagctg ccccagtcat
     3181 cgctggtcac catgccgata cagaacggag tcaacagggc taacagttcc cgacaggtct
     3241 catcattccg tggcccgaaa gtgtaagcca acacaccgcc agttttagtg ttgtacgcat
     3301 accagagcca gtgttgtgtc aacgacggat gaaaagtgat ccacttatat ctccaccaac
     3361 ggcccaatat tgatccaccg ttttactcag gattagcttc tgctataacc ccggcctttc
     3421 gtttctgtct gagtcgatag ctttctcctt tgatttgaac gacatgtgag tggtgtaaga
     3481 tacggcccag catcgctgag gtcagtgctg catcaccggc gaacgtttga tcccactgcc
     3541 cgaacggtag attggatgtc aggatcattg cgctcttttc ataacgttta gcgatgacct
     3601 ggaagaacag ttttgcttct ttctgactga acggcagata gcctatttca tcaatgatga
     3661 gcaggcgggg ggccattact ccacgctgaa gcgtcgtttt ataacggccc tgacgttgtg
     3721 ccgtagataa ctgaagtaac agatctgctg ctgttgtgaa gcgaacttgg atacctgcac
     3781 ggactgcttc atagcccatc gcgattgcca gatgggtttt ccccacacct gatggcccca
     3841 gtaatacgat attttcatta cgttctatga agctgagtga gcgtaacgac tggagttgct
     3901 tctgcggtgc tccggtggcg aatgtgaagt catactcttc gaacgttttc accgccggga
     3961 agg
//
LOCUS       DADKRT010000256         3948 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.261, whole genome shotgun sequence.
ACCESSION   DADKRT010000256 DADKRT010000000
VERSION     DADKRT010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3948
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.261"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..682
                     /gene="csgG"
                     /locus_tag="JQ356_004010"
                     /pseudo
     CDS             1..682
                     /gene="csgG"
                     /locus_tag="JQ356_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309441.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
     gene            complement(746..1237)
                     /locus_tag="JQ356_004011"
     CDS             complement(746..1237)
                     /locus_tag="JQ356_004011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HAY4623932.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIK
                     NKA"
     gene            complement(1339..1893)
                     /locus_tag="JQ356_004012"
     CDS             complement(1339..1893)
                     /locus_tag="JQ356_004012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY4623933.1"
                     /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DELLTRLQKSCDMAQVSADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMPL
                     ADTPADHIGTLLLAASWMEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
                     RTMAPLTRDAISAMWDELEEDSEE"
     gene            complement(1917..2654)
                     /locus_tag="JQ356_004013"
     CDS             complement(1917..2654)
                     /locus_tag="JQ356_004013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HAY4623934.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER
                     ILNVSPRRLLNFLESRGMAPIAEFADL"
     gene            complement(2709..3647)
                     /gene="ghrA"
                     /locus_tag="JQ356_004014"
     CDS             complement(2709..3647)
                     /gene="ghrA"
                     /locus_tag="JQ356_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415551.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HAY4623935.1"
                     /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV
                     WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY
                     AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
                     PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD
                     GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV
                     AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY"
BASE COUNT         1036 a         1025 c          943 g          944 t
ORIGIN      
        1 ttcggtatac aacattcagg acgaaaccgg gcaatttaaa ccctacccgg caagtaactt
       61 ctccactgct gttccgcaaa gcgccacggc aatgctggtc acggcattga aagattctcg
      121 ctggtttata ccgctggagc gctagggctt acaaaacctg cttaacgagc gcaagattat
      181 tcgtgcggca caagaaaacg gcacggttgc cattaataac cgaatcccgc tgcaatcttt
      241 aacggcggca aatattatgg ttgaaggttc gattatcggt tatgaaagca acgttaaatc
      301 gggcggtgtt ggggcaagat attttgggat cggtgcagac acgcaatacc agctcgatca
      361 gattgccgtg aacctgcgtg tcgtcaatgt gagtaccggt gagatcctct cctcggtgaa
      421 caccagtaag acgatacttt cctatgaagt tcaggccggg gttttccgct ttattgacta
      481 ccagcgcttg ctggaagggg aagtgggtta cacctcaaac gaacccgtta tgctgtgtct
      541 gatgtcggct atcgaaacag gggtcatttt cctgattaat gatggtatcg accgtggtct
      601 gtgggatttg caaaataaag cagaacggca gaatgacatt ctggtgaaat accgccatat
      661 gtcggttcca ccggaatcct gacagataaa aaagccggaa ttatcatccg gcattttact
      721 gtttaagcga aagcgtgagt gcccctcacg ctttattttt gatttcctgc tcacggtgag
      781 ccgtctttgc actacgcgcc gccagccaca ggccgctgtt tttcattgcg taaccaaata
      841 ccagcccaag cgccagcgaa ggtaacacca gtttccagtc accctgcccg gcaaacgtcg
      901 cgcatgcgcc tataaacgtc cccggaacaa atgaaagcag cagctgtttg gcctgaatac
      961 acatcagaaa cgccacaata ccggttatga cataaccgag aatttccaga tgtggtgcca
     1021 gtgcactacc gtaaataatg accatcgccc acaccacgcc actaagcagg gttgcagcgg
     1081 agatcgccag ccctttcagc ccaccttgcg ggcaggcaaa gtaggccgta cagcccagga
     1141 agcccgccca gcttagtaag cccagggaaa cagccaccca tccccagata ccggagagaa
     1201 tgcctgttgt gattgcaata gagagaagta tgttcatgcc gcacatgata gcagaaaacg
     1261 cggccatgaa tgagatcgag cacacatttt atgcaacaac aaattatctg ttgcagttat
     1321 gagtgacgat gatcacattt actcttcaga atcttcttcc agctcgtccc acattgcact
     1381 aatggcatca cgggttagcg gtgccatggt gcgccagaaa ggcgtggttg catgggcctc
     1441 cactttgccg aggaacgcac cacaccaggg taacagatac tcactgaaca gtgtttccag
     1501 tgcttcgctc tcatcttccg ttgactgatc ttccatccag gaagccgcaa gcagcaatgt
     1561 gccgatgtga tcggctggcg tatccgccag tggcatccct cgttcggaaa gaaaagcgcg
     1621 cacttccgct tccgttgcgt cctcaaccca tgcgctacga tatggcggca cggcacattc
     1681 atcgccgata aacaacgcat tgtaatcggc agagacttgc gccatatcac agcttttctg
     1741 taaacgcgtc agtaactcat cctgctccag tggccagttc gcagccagtt tcccctcacg
     1801 aatcagggta aacagcggca ccagtaaagg atcttgcggt tggcggtaat agagcgaacc
     1861 cagcacacga cagaggatag aaaactcgtt cattaatata tttccattac tagtaattaa
     1921 aggtctgcaa attccgcaat cggtgccata ccgcgagatt caaggaagtt cagtaagcgg
     1981 cgcggagaaa cattcaaaat gcgctctggc ggaaaatcta ccgcgtcgag gattttaaga
     2041 cactcttcaa attcccccat ggtaaacgcg gtgtgagaat ccgagcctaa tgccacccaa
     2101 cctccagcat cacgtaccgc tgcggctacc gcacgacagt tgtcttcact gcccttacgt
     2161 gagtgtaaaa atgaagaatt attgatttcc agcgccacct gatgtttcgc ggctgcttca
     2221 gcaacggctt tcacatctat ttcatatttg ggatttccgg gatggcttat tatatgcaca
     2281 ttgccgctgg cgatagtggc gatcatcgct tgtgtattgg tcgctttgtc atgtggtgca
     2341 aaaaccggct catgaaaacc ggcaataatc agatccagcg agtcaaacat tttaccgctg
     2401 caatcaattt caccatcaac atttttaatg ttagcttcga tgccgcgcag gatccctacc
     2461 ccatcaacca ctcgcggcca gatacgcatg ttaatgaagt gccagtgatg cggagcatct
     2521 tccatatccg ggccatgatc ggtgatcgca aaaagtttaa tgcccttttg tttggcctgg
     2581 gcaatgtaat cactcaatgt gctatatgca tgtgtgctgg caacggtatg catatgaagg
     2641 tcgacgggat acataactct ctcctgtatt caattcccgc caaggatagc aggaatcctg
     2701 atgctttatt agtagccgcg tgcgcggtcg acttgcccgc agaccctctc ccctttttcg
     2761 agctgggcaa tggtgcgaga aatgtactcc acagcttcag cgggacgggt aatcgcggcg
     2821 acatgtggtg ttatcgtcac gcgtggatgt tgccagagcg gactttcagg cggtaagggt
     2881 tcacgattaa aaacatccaa cattgcgcct ttaactttgc cgctatccag cgccgcgagc
     2941 aggtcatctt ccacaacatg aacaccacgc gccaggttga ggagatacgc gccatccggt
     3001 aatttttcga gtaattgttg attaataatg ccgacggttt caggggtatt cggtaacaaa
     3061 ttaatcaata cccgacattg gctcagaaat gcagacagtt cttcccgtcc ggcaaagctt
     3121 tgcacgccag gccacgattt acgggttcga ctccagcaac gcagcggaaa gcgccaggtt
     3181 tgcagactct gagcaacttt actgcccagt acgcctgcgc ccaaaatgcc gatggtaaaa
     3241 tcttcccaat gatattcagg cagcggttgc caatgcgaac tattttgctg gatgcgataa
     3301 tcgtcaaaac gtcgaaacca atgcagcacc tgactgacag catattcctg catttgctcg
     3361 cccataccag tatcttccag gcgaaaaagt ggaacagaag ggttcagcat ttcagggtgt
     3421 gcctgtagct tgctcaaaat agaatcaaca ccggccccga gtgcgaacac cgctttaaga
     3481 tcgcgccctg ccagcatttc aacaggagga tgccagacta aagcataatc agcagagtca
     3541 ttatctccgc ttttccatgc tctgactctt gcctgaggaa tagctttgcg cagtgcctca
     3601 atccaccatt gggtatcgaa cgttgggtga taaaagatga tatccatact gactcccgaa
     3661 aagcgttgtg cgaaatttat tcgcacttat cgttatgatc tacaaaggcc accagcataa
     3721 caaatccgtg gtcggtggca aaaaaagcag atttcgctta ttaaaaccac acattgattg
     3781 aagtttgaat aaacgcgcga ttttttcaaa aagtttgttg acctcaggtc atgatttccc
     3841 taaattagcg cccgttccag caagacagga acaacaattt ggtgaggtgt ccgagcggtt
     3901 gaaggagcac gcctggaaag tgtgtatacg gcaacgtatc gggggttc
//
LOCUS       DADKRT010000257         3851 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.262, whole genome shotgun sequence.
ACCESSION   DADKRT010000257 DADKRT010000000
VERSION     DADKRT010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.262"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..439
                     /locus_tag="JQ356_004015"
     CDS             <1..439
                     /locus_tag="JQ356_004015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY4623936.1"
                     /translation="FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR
                     ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIA
                     EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE"
     gene            447..1775
                     /locus_tag="JQ356_004016"
     CDS             447..1775
                     /locus_tag="JQ356_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY4623937.1"
                     /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
                     TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
                     ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
                     RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
                     AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG
                     GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGSYLCLFDVDKFKNI
                     NDTFGHLLGDEVLMKVVKILKSQIPVDKGKIYRFGGDEFAVIYTGGTLEELLSILKEI
                     VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
     gene            complement(1822..3147)
                     /gene="rimO"
                     /locus_tag="JQ356_004017"
     CDS             complement(1822..3147)
                     /gene="rimO"
                     /locus_tag="JQ356_004017"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HAY4623938.1"
                     /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
                     MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
     gene            3360..3743
                     /gene="bssR"
                     /locus_tag="JQ356_004018"
     CDS             3360..3743
                     /gene="bssR"
                     /locus_tag="JQ356_004018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HAY4623939.1"
                     /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
                     NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
                     KLENCLMSLTLSIQSLQKHAMLEKA"
BASE COUNT         1006 a          857 c          951 g         1037 t
ORIGIN      
        1 ttttaccacc atcatgaaag aaaatggcct gaaggcgaac agcctctgtg ttgagatcac
       61 tgaaaccgtg atcgagcgaa ttaatgaaca tttttatctc aatattgaac aactgcgtaa
      121 acaaggggta cggatatcga ttgatgactt tggcaccggt ttgtcaaacc tgaaacgttt
      181 ttatgaaatt aatccagaca gcataaaggt ggactcgcaa tttaccggcg atattttcgg
      241 tactgcggga aaaattgtgc gcattatttt cgatctggca cgctataacc ggatcccggt
      301 gattgcggaa ggcgtagaga gcgaagacgt tgcacgcgaa ttaattaaat taggatgtgt
      361 tcaggctcag gggtatctgt accagaaacc tatgccattc tccgcctggg ataaaagtgg
      421 aaaattagta aaagagtagt ttacgtatgt ccagaatcaa taagttcgta cttacagtca
      481 gtctgctgat ttttatcatg atttcagcag ttgcctgcgg gatctacact caaatggtaa
      541 aggaacgggt gtatagcctg aaacagtccg ttattgatac tgcttttgcg gtggcaaata
      601 ttgctgaata tcggcgtagc gtggcaattg atcttatcaa cacgctaaat cccacggagg
      661 aacagctgtt ggttggtttg cgcacagctt acgccgactc ggtttccccc tcttatttgt
      721 acgatgtcgg tccttatctg atttccagtg acgaatgtat tcaggtaaag gagttcgaga
      781 aaaattattg tgcagatatt atgcaggttg tgaagtatcg acatgtcaaa aatacagggt
      841 ttatctcttt tgacggtaaa accttcgtct attacctcta tccggtaact cacaatcgta
      901 gtctgatatt tttgcttggt ctggagcgtt tttctttact gtcaaaatcg ctggcgatgg
      961 acagcgagaa cctgatgttc tctctattta agaacggtaa accggtgacc ggtgatgaat
     1021 ataatgctaa aaacgccatc ttcaccgttt cggaagcgat ggagcacttc gcctatttgc
     1081 cgaccggatt gtacgtattt gcgtataaaa aagatgttta tttgcgggtc tgtacattga
     1141 ttattttctt tgccgcattg gtggctgtga tatcgggtgc cagttgcctc tatctggtac
     1201 gcagagtgat taatcgtggt attgtggaga aagaagccat cattaataac cattttgaac
     1261 gcgtactgga tggcgggctt ttcttttcgg ctgccgatgt caaaaaactc tacagtatgt
     1321 ataactcggc gttcctggac gacctgacca aagcaatggg cagaaaatcc tttgacgaag
     1381 atttaaaagc gctgccggaa aaaggcagtt atttgtgcct gtttgacgtc gataaattca
     1441 aaaacattaa cgacaccttc ggtcatttgc tgggcgatga agtgttgatg aaagtggtga
     1501 aaatccttaa atcacagatc ccggtagata aaggtaaaat ctaccgcttc ggcggtgacg
     1561 aatttgcggt gatttatacg ggtggaacgc tggaagagtt gctatcgatt ctaaaagaaa
     1621 tcgttcattt ccaggtggga agcattaatt taagtaccag tatcggtgta gcgcattcaa
     1681 atgaatgtac caccgtcgaa cgcttgaaaa tgctggcgga tgagcggctg tataagagta
     1741 agaaaaacgg cagggctcag attagctggc agtaatcatt attcgcaggc cggacaaatg
     1801 attttgcccg gcctgaatta attaaacccg gctaccccac aaatcgtact catcggcgtg
     1861 ctcgactttc acacgcagga tatcacccgg cttaacgttg gtttcaccat tgagataaac
     1921 cgcgccgtcg atttccggtg catctgccat gctgcgacca atcgcgcctt cttcgtccac
     1981 ttcgtcgata atcaccagaa tttcacggcc cactttctct tgcaggcgct cggcggaaat
     2041 ctgctgctgc agctgcatga aacggttcca gcgttcttct ttaacttctt ccggaacctg
     2101 gtcaggcagg gcattggcgt ctgcaccttc aaccgggctg tatttaaagc agccaacgcg
     2161 atccagacgc gcttctttca ggaagtcgag tagcatctgg aaatcttctt ctgtctcgcc
     2221 agggaagccg acaataaagg ttgagcgtag ggtcagttcc gggcagattt cgcgccactg
     2281 tttgatgcgc gccagttggc gatctacaga acccggacgc ttcatcagtt tgagaatgcg
     2341 cgggctggcg tgctgcaacg gaatgtccag atacggcagg attttgcctt ctgccatcag
     2401 tgggatgacg tcgtccacat gcggataagg gtaaacgtag tgcagacgtg tccagatccc
     2461 cagtttcgat aactgttcgc acaggctgac catgctggtt tttaccggct cgccgttgtg
     2521 gaagccagta cgatgtttaa catcaacgcc ataggcggaa gtatcctgcg agatcaccag
     2581 aatctcttta acgcccgcat ctaccagacg tttcgcttca cttaacactt cgccaatcgg
     2641 acggctcacc aggtcgccgc gcatagacgg aataatgcag aaggtgcagc ggtgattaca
     2701 gccttccgaa attttcagat aggcataatg acgcggcgtc agtttcacac cttgttctgg
     2761 caccaggctc aggaatgggt tgtgtttcgg ttttggcacg tagtgatgaa cgtgctccag
     2821 aacctgctca tagctatgag gcccggtgat ttccagcact ttcgggtgga cttcgcggat
     2881 ctgatcttct tttgccccca gacaaccggt cacaattacc ttgccgtttt cattcaacgc
     2941 ttcaccaatg gcttccagtg attcttgtac cgcgctgtca ataaagccgc aggtgttgac
     3001 gatcaccatg tccgcatcgt catagctcgg taccacgtca taaccttcag tgcggagttc
     3061 ggtgagaata cgctctgaat cgacaaggtt tttcggacag ccaagggaaa caaagccgat
     3121 tttcggctgg ggagttactt tgctcatagc ttaaaaaata ttcagttaca ggaaaggtca
     3181 gggcagggat tctacagagt tctggataaa atttgtatcg caatctcatt cgctggcgga
     3241 ggcgaaggaa atgtaaattt tgttaattcg gcgtgaagaa ttgatcctgg acagcatttt
     3301 gctcaaaaaa tagccatact atttaattgc aacaaggctg gaaagaggag gatcgaagta
     3361 tgttcgttga cagacagcga atcgatctgc tgaaccggtt gatcgacgca cgcgttgacc
     3421 tcgctgcata cgtgcaactg aggaaggcaa aaggatacat gtccgtcagc gaaagcaatc
     3481 atctacgaga taactttttt aaactgaatc gcgaactgca cgataaatcg ctgcggttga
     3541 atcttcatct ggatcaggaa gagtggagtg ctcttcatca tgctgaagaa gcattagcga
     3601 cagccgcagt atgtttgatg agtgggcacc atgattgccc gactgttatt accgtcaacg
     3661 ccgataagct tgaaaattgt ctgatgagct taacgctgag tatccagagc ctgcagaagc
     3721 acgccatgct tgagaaggcc tgaaaactaa gggggagaaa gcgtctcccc cttcatgttt
     3781 aagtttttgt aaaaatgaat ttgttatctc ctccactgac tacgctttaa gccagagtca
     3841 atccggaggc g
//
LOCUS       DADKRT010000258         3838 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.263, whole genome shotgun sequence.
ACCESSION   DADKRT010000258 DADKRT010000000
VERSION     DADKRT010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3838
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.263"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(521..712)
                     /locus_tag="JQ356_004019"
     CDS             complement(521..712)
                     /locus_tag="JQ356_004019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HAY4623940.1"
                     /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADDQADICEALHDH
                     ADELYRSCLARFGDDGENL"
     gene            756..1103
                     /locus_tag="JQ356_004020"
     CDS             756..1103
                     /locus_tag="JQ356_004020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000613379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HAY4623941.1"
                     /translation="MIPVKRERMLTIRVTDEEHARLLARCEGKQLASWMRKVCLGAPP
                     SKTSGLPTLAPPLLRQFASVGNNLNQIARKINSGQWSGHDRVHVVAALMAIGRELSEL
                     RDEVRKQGERDDS"
     gene            1066..1809
                     /locus_tag="JQ356_004021"
                     /pseudo
     CDS             1066..1809
                     /locus_tag="JQ356_004021"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
     gene            1781..2341
                     /locus_tag="JQ356_004022"
     CDS             1781..2341
                     /locus_tag="JQ356_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000067489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="HAY4623942.1"
                     /translation="MSNLLQMGTDFEKKLKERAVSTENILNSEFRKLEASVDRELNLN
                     GQKIRDAISAHTAAVKEQLETLNSAVNAQFSATENELARRQEELLWKLVKGRILYPSL
                     TALCVTGGIFLASWGLIQWQESRIAANILAIRDQEETLAKLREKTWGVTYHEGRNGKF
                     LVLPSGVKGENNWTVEKKNAVRLVRE"
     gene            2348..2581
                     /gene="mbeD"
                     /locus_tag="JQ356_004023"
     CDS             2348..2581
                     /gene="mbeD"
                     /locus_tag="JQ356_004023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
                     /protein_id="HAY4623943.1"
                     /translation="MTELEMHLLNALEQLQQDYTQRLKDWESAFTDLQHMFELTRQEN
                     GQLREQCDDLSQQVQRLVEQVDHLSRLFITNSR"
     gene            complement(3052..3519)
                     /locus_tag="JQ356_004024"
     CDS             complement(3052..3519)
                     /locus_tag="JQ356_004024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623944.1"
                     /translation="MRIDISHQTRHTPPNMLPREQNCVAMALSACFRQQLNPVVNSLL
                     KERIIHSPKELEHDNAVIRALQKLQIQEVCNSTLWETAKQQLLQKSDGRYFAINSKHL
                     AFPGPGESHAFCCIKYKNAIGINGNNAETQSTHYQPYPYDKVSIWGPFPHNLT"
BASE COUNT          913 a          877 c         1146 g          902 t
ORIGIN      
        1 accaggggga aacgcctggt atctttaagt cctgtcgggt ttcgccacct ctgacttgag
       61 cgtcgatttt tgtgatgctc gtcagggggg cggagcctat ggaaaaacgc caccggcgcg
      121 gcctttttcg ggctcttgtt ttttgctcac atgtttcttt tggctttatc ccctgattct
      181 gtggataact gtgttaccgt ctttgagtgc gctgataccg ctcgccgcag ccgaacgacc
      241 gagcgtagcg agtcagtgag cgaggaagcg gaagagcgcc ggaagctaca ttttctcctt
      301 acgcatctgt gcggcatttc acacccggca tggtgcactt ttcatacaat ccgcactgat
      361 gccgcataag taagccagta tacactccgc tatcgctacg tgactgggtc atggctgcgc
      421 cccgacaccc gctaaaacct gctgacgcgc cctgacgggc ttgtctgctc ccggcatccg
      481 ctcacaggcc agctgtgacc gtctccggga gctgcatgtg tcagaggttt tcaccatcat
      541 ccccgaagcg tgcgaggcag ctgcggtaaa gctcgtcagc gtggtcgtga agcgcttcgc
      601 agatgtcagc ctggtcgtcg gcgtccagtt cattcagttt ttccagcagg gtcagcgtct
      661 ggcttctgat gaagcgggcc atgttaaggg cggttttttc ctgtttagtc acagttctgt
      721 ttctccatgt gtggggagtc tgtcggaggt ttttaatgat accggtgaaa cgcgaaagga
      781 tgctcacgat acgggtcacg gatgaggaac atgcgcggct gctggcacgt tgtgagggaa
      841 aacaacttgc gtcatggatg cgtaaggtct gcctgggggc accgccatcg aaaacgtcag
      901 gtcttccgac actggcaccg ccgctgttgc gccagttcgc ttcggtcggc aataacctga
      961 atcagatagc ccggaagata aacagcggac agtggtcggg gcatgaccgg gttcatgtgg
     1021 tggctgcact gatggccatc ggacgtgaac tgagtgagct gagggatgag gtccgtaaac
     1081 agggagagcg ggatgatagt taagtttcat gccaggggaa aaggcggtgg cagtggtccg
     1141 gttgattacc tgctgggccg ggagcgtaac cgggaagggg cgagagttct gcggggtgct
     1201 cccgaagagg tgcgggaact catcgatgcc acgccgtttg cgaaaaaata cacctcgggg
     1261 gttctgtctt ttgcagagca gaccctgcca ccgggagagc gtgaaagggt gatggagagc
     1321 tttgagcggg tactgatgcc cggtcttgaa aaaaatcagt acagcatcct gtgggtggag
     1381 caccaggaca aggggcgtct tgagctgaat tttgtcatcc cgaatatgga gctggcgagc
     1441 ggaaaacggc tccagcccta ttacgaccga gcggaccgtc cgcgaatcaa tgcctggcag
     1501 acactggtga atcaccatta cgggctgcac gacccgaacg caccggagaa caggcggaca
     1561 cttgtcaccc cgaataatct gccgaaagcg aaacaggagg ccgcagaagc gattacgagg
     1621 ggactggagg ctctttacca tgccggagcg ctaaaaacgc gtcaggatgt cactgaggcg
     1681 cttacagcgg caggttttga ggttgtgagg acaaccagga gcagtatcag tatcgccgac
     1741 ccggagggcg ggcgtaatct caggctgaaa ggggcgctgt atgagcaatc ttttacaaat
     1801 ggggacagac ttcgagaaga aactgaaaga gcgtgccgtc tctacagaga acatactgaa
     1861 cagcgagttc aggaagctcg aagcgtctgt agacagggaa ctgaacttaa acgggcagaa
     1921 aatcagagac gctatcagcg cacacacagc agcggtgaaa gaacaactgg agacgctgaa
     1981 cagtgccgtg aacgcgcagt tcagcgccac agagaacgaa ctggcccggc ggcaggaaga
     2041 gctgctctgg aagctggtca aagggcggat actgtacccg tcgctgacgg cgctttgcgt
     2101 cacgggcggg atttttctgg cgtcatgggg gctgattcag tggcaggaaa gccggattgc
     2161 ggcgaacatc ctggctatca gggaccagga agagacgctg gcgaaactcc gggaaaaaac
     2221 atggggtgtg acgtatcacg agggcaggaa cgggaaattt ctggtattgc cgtccggggt
     2281 gaagggggaa aacaactgga cggtggagaa gaagaacgca gtaagactgg tcagggagta
     2341 agtgagtatg acagagctgg aaatgcactt actgaacgcc ttagagcaat tgcagcagga
     2401 ctatacgcag cggctgaaag actgggagag cgccttcacg gatttgcagc atatgttcga
     2461 gctgacacga caggagaacg ggcaactgag ggaacagtgc gacgacttga gtcagcaggt
     2521 gcagagatta gtcgagcagg tggaccactt gagtcggtta tttatcacga acagcagata
     2581 agggatgaac aggaaaggca ggcacgcctg gaacgggagc gtgcgcggtc ctggcatgaa
     2641 gagcaggaac gggaagcacg ggtatggcgt ggcccgtcaa tagggatatg acggtgagtt
     2701 gttccgggag gttgccagat ggtaccggaa cgcgttaaaa acgcatccgg gcgcgattct
     2761 ggcgtgtcgt ttttgttgct gtgttttgcc tctttgccag atcgcgctca ttcctcagcc
     2821 tcatcccgcg atgtctgcgt atgtcatcaa ctgaaaagat ggaaaaaaaa acagtgtcat
     2881 gaggtttacg caggcaaaac cagcgttatt cacatggctg aatagctatg catacggtta
     2941 aaatttatca ggtgcgatcg cggcagcttt tcgggtggtt tgttgctatt tttacctgtc
     3001 agcagccgtg atcgcgctga acgcatttca gcggtgcgta caattaagat attacgttaa
     3061 attgtgaggg aatggtcccc atatactgac tttatcatag ggatagggtt ggtagtgggt
     3121 cgattgggtt tcggcattgt ttccgttaat gccaattgca tttttgtatt tgatgcaaca
     3181 gaaggcgtga gattctcctg ggcctggaaa ggctaagtgt ttagaattga tggcaaaata
     3241 tcttccgtcc gatttttgaa gtagttgttg tttggctgtc tcccaaaggg tgctgttaca
     3301 aacttcttga atttgtagtt tttgcagggc tcttattact gcgttgtcat gttccaattc
     3361 tttaggggag tgtattattc tctcttttaa taagctgttt accacagggt ttagttgttg
     3421 tctaaagcac gcagataatg ccattgctac acaattttgt tcccgaggaa gcatgtttgg
     3481 cggggtatgc cgtgtttgat gtgatatgtc tattctcata gaaggtctct ggcttatagc
     3541 atcaacaaat acggctataa aacaaaattt tcatagagtg attcaagatc ttcttgagat
     3601 ccttttttgc ggcgcgtaat ctgctgcctg caaacaaaaa aaccaccgct accaacggtg
     3661 gtttgtttgc cggaatctag agctaccaac tctttcttcc gaaggtaact ggcttggtgg
     3721 agcacagata ccaaatactg tccttctagt gtagccgcag ttaggccacc acttcaagaa
     3781 ctcttaatat ctcaatccac cttgtctagt taccaatggc tgctgccagt ggcgttaa
//
LOCUS       DADKRT010000259         3815 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.264, whole genome shotgun sequence.
ACCESSION   DADKRT010000259 DADKRT010000000
VERSION     DADKRT010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3815
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.264"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            367..678
                     /locus_tag="JQ356_004025"
     CDS             367..678
                     /locus_tag="JQ356_004025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY4623945.1"
                     /translation="MFNVITHPAALDELLELPDNLRGRMTRLIERLEQEGNKMKMPHS
                     RVIGGGLFELRVGDKNIARTLYAYATGNEIYLLHAFVKKTQKTPTKAIEIARMRLKEM
                     N"
     gene            678..965
                     /locus_tag="JQ356_004026"
     CDS             678..965
                     /locus_tag="JQ356_004026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY4623946.1"
                     /translation="MKVKGVPFSQVKQKLLSTPEAVKGYEDADKELEMVEMLYEMREK
                     AGLTKSALAERMGLRPSAISRLESNPLGASMKTLTKYAHACGATIDIHAVY"
     gene            complement(1502..2689)
                     /locus_tag="JQ356_004027"
     CDS             complement(1502..2689)
                     /locus_tag="JQ356_004027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HAY4623947.1"
                     /translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
                     LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPDCPWQHIVF
                     TLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPRIFTVIHTWGRDQQWHPHI
                     HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVMPDALAAEGSSKR
                     EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPVSRLEHYAGQDEIGLR
                     YNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITE
                     TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
                     WCG"
     gene            complement(2689..3054)
                     /locus_tag="JQ356_004028"
     CDS             complement(2689..3054)
                     /locus_tag="JQ356_004028"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623948.1"
                     /translation="MARSAKPRKRKPASQRSKLPRYVVKLHEDDFFDEEDAEVLRFDS
                     FDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATILSGISAGG
                     MYCPECGTVHWPDGVAPPF"
     gene            3139..3468
                     /locus_tag="JQ356_004029"
                     /pseudo
     CDS             3139..3468
                     /locus_tag="JQ356_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146522.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            3498..3581
                     /locus_tag="JQ356_004030"
                     /pseudo
     CDS             3498..3581
                     /locus_tag="JQ356_004030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052676.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
     gene            3581..3676
                     /locus_tag="JQ356_004031"
                     /pseudo
     CDS             3581..3676
                     /locus_tag="JQ356_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858351.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT          989 a          997 c          899 g          930 t
ORIGIN      
        1 ctattagcgg ttaccagcgc cccaccagac ccggtgacat caccccccgg atcatggacg
       61 actgggggca gtaatcatgc cgggtctggc tggctaacac cccattataa ggggtacgaa
      121 taaagtaacg ggggtaaggt gaaatctgtc aatcagtacc ggcttacgcc gggcttcggc
      181 ggttttactc ctgtgccata tgcaacaacg gagtgccgcc ttccatgccg ctaacgcggc
      241 atcaaaaaat ccctcttctc cagttgcccc cctccgaact cagagtgtat tttcatttat
      301 tgatgaaatt tactgtttgc gcaattttcc tgttttagtg tattttgtca ttctggaggc
      361 tataatatgt ttaatgtgat tactcacccg gccgcactgg atgaacttct agaattacca
      421 gacaatctgc gtggtcgtat gaccagactg attgaacggc tggaacagga aggtaacaaa
      481 atgaaaatgc ctcacagccg tgtaattggc ggagggcttt ttgaactgag agtcggggat
      541 aaaaatatcg caaggacact gtacgcttat gcaacgggta acgaaatcta tctgctgcat
      601 gcatttgtga aaaaaacgca aaagacacca acgaaagcta ttgaaattgc caggatgcgt
      661 ctgaaggaga tgaactgatg aaagtaaaag gtgttccatt cagccaggta aagcaaaaac
      721 tactcagtac tccagaagct gtcaaagggt atgaggatgc tgacaaagaa ctggagatgg
      781 tggaaatgtt atacgaaatg agagaaaaag cgggattaac aaagtcagca ctggccgaac
      841 gaatggggtt acgcccgtca gccatcagtc gcctggaaag taacccttta ggggccagca
      901 tgaaaacttt gacaaaatat gctcatgcct gtggcgcaac catcgatatt cacgctgtct
      961 attgaggggt ccgcttggaa ttcggaaaat aaaccacgtt aagactattt tttagataaa
     1021 tgactttcag gaatcgccaa gatggcggga taacagcggt tttggtgtcc taaatcgtac
     1081 aattctgtac atccacgcaa gggaatgtac ggaagtaagc cagacggtta tcggacggtc
     1141 agaacatttc gtacagcctt tacgttcagt gagttagctg gcctggacgt aaccactcgt
     1201 tagctcaatt ctcttagcgt gggaaaattt ccgaattcca agcggacccc tttatccttg
     1261 ccccgctgaa tgaggaaacg ctgttccggg ggattatgct gaacgtcttc cgttcatcga
     1321 taggaattaa aaccccaaaa agattaaaaa acaccacaaa acggatgttt cttcaacacc
     1381 acttttgctc atatgaacgg aaccgacgat taaactggat ggctctgatt gattcagggt
     1441 atgaatggcg gttttttgct ccgtttccct caaaatggac gctacttacc ctctgcggct
     1501 ctcagccgca ccaccgcatc cgggccagcg gctcatgcat caggacctgc tctgccagac
     1561 ggtagccccg cttcagcccc gtaaaacgca tctgactccc gcacagcacg cacttcagcg
     1621 ggtcaacctt cagtaacctc tgatacatcc ctctccaggt gatttgcatc gccgtttttc
     1681 tcactgtctc cgttatgatg tacaccactt cttccagtaa ccgccgtttc gccggactca
     1741 gaaaaccgta gtacctcacc atacggaacc ccttatccgc cacatgccag gagaaccttt
     1801 ccatgaactc atctccactc atcaacaggt attcttcccg ttttgttcgg tgactgttgt
     1861 aacgcagtcc gatttcatcc tgaccggcat aatgctccag acgactcacc ggcaccggtg
     1921 gctttttcag gtaagagcca aagtacaccg ccacatgggt ggcattatcc atcacccggg
     1981 atacgttgac attccagcca cggcggtaat gcgtgtccag gaagcgattc cattcccgtt
     2041 tactgcttcc ttctgctgcc agcgcatccg gcatcaccag gtcagggtat ttccgtgaca
     2101 gtaaccgtgt tatccggtag cgccacatgc tcatcacctt acgggcgtaa aaatgaagat
     2161 ttttccaggt gtggcccgac gtcacaccac cggcagttgt cgataaatgg atatgcggat
     2221 gccactgctg gtcacgcccc catgtgtgga tcaccgtgaa tatcctcggc tccacatctg
     2281 cctgatggca gatttccagt atcacatccg ctgcaatgcg gctcatctct gccagcaacc
     2341 accggttgtg gaacaccagg gaccagtact ggcagggtaa cgtgaacaca atatgctgcc
     2401 atgggcagtc ggggaccagg ctcagcagat actgtatcca ctgtgcgcca gccttcaccc
     2461 cgcagtgcgg gcaggagcgg cttttacacc ggaagcagac cttttttgta tggcaacagt
     2521 ccggtgatga acagcaccac tgtgtatacc ccatcagtgt ggtcccgcac gccatgattt
     2581 tggtcaccga ctcaatcacc accggacgta ctgccccttc cggctgcttc tccagccagt
     2641 taagccagcg gtttccctgc tgaaagatat cggcaaaacg gggaagcatc agaagggcgg
     2701 ggcgactccg tccggccagt gaaccgtgcc acactccggg cagtacatac cgccggcgct
     2761 gataccggaa agaatggtcg caaattcccg ctccgtgcag cgggcaattt ccggataccc
     2821 ttcgtcatca acacgtacaa accagaagac cagttttttg tttccggcat ccacaaagaa
     2881 cggaatattc aggtctgcgc aacactcaac ggcatcatca aaactatcaa agcgcagaac
     2941 ttctgcgtct tcttcgtcaa aaaaatcatc ttcgtgaagc ttcacgacat agcggggaag
     3001 tttgcttctt tgagaggcgg gtttacgttt acggggttta gctgaacggg ccatataacc
     3061 acctgaaaga caatgacatt gcctgttttt ataacggtaa ttgcagacca tgacaagccg
     3121 cagccgtcag gctgcctact cgagcttcag ctcaataaag gcgaatatcg acataaatta
     3181 ccccgatgga tcttttttgc aaatcagggt gaattcacga ccggtgatta cgaagaaatc
     3241 atgaataagg ccagcgccct gagtctggta tcgaatgcaa tcctgtactg gaatacatca
     3301 agaataagca atattgttga agggttacgt gaaaatggtg aggttattga tgatgacgta
     3361 ttagcccata tatcattact gccctataaa cacgtattac ctaatggtac ttattttgtt
     3421 gatggagaac cttacggtac tgagcctacc gaaagagcaa aaccgtaagt ttctgttcaa
     3481 atgctcccgc tggtccatcc ggacagatta tcgaccatca ggctgtacag gcctgggcgg
     3541 acagcctcag tactgacaat ccgttaccgg tgccacgctg atggaacaga agtggaccag
     3601 taaggcgctt tctgatttgg cgcggttata tgattttctg gtgctggcca gtaaacctgc
     3661 tgccgccaga atggtacacg tataggaaat tgaaaaacca gacgataccg ctgtccacgc
     3721 cttatgccac gtgagctttt ctgcttttcc ctccactccg gtgttttctc tctctgcatg
     3781 gtcgattctt ataccgcaac aggctgtttt ttata
//
LOCUS       DADKRT010000260         3802 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.265, whole genome shotgun sequence.
ACCESSION   DADKRT010000260 DADKRT010000000
VERSION     DADKRT010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.265"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            168..365
                     /locus_tag="JQ356_004032"
     CDS             168..365
                     /locus_tag="JQ356_004032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF826 domain-containing protein"
                     /protein_id="HAY4623949.1"
                     /translation="MRSEEVRSALKQKLRQNLESRLDAEVDAILDELLGVAAVPEPEG
                     IAGDGSASDGGEPTPDSDMMM"
     gene            442..657
                     /locus_tag="JQ356_004033"
     CDS             442..657
                     /locus_tag="JQ356_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY4623950.1"
                     /translation="MYQMEKITTGVSYTTSAVGTGYWFLQLLDRFSPSQWAAIGVLGS
                     LLFGLLTYLTNLYFKIREDRRKAARGE"
     gene            662..1006
                     /locus_tag="JQ356_004034"
     CDS             662..1006
                     /locus_tag="JQ356_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HAY4623951.1"
                     /translation="MKKKYELVVKGINNYPNKITVTVALEIGGYPSLLLPDVAISLDR
                     TEDATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPG
                     IITGSLKTPPLA"
     gene            1057..1590
                     /locus_tag="JQ356_004035"
     CDS             1057..1590
                     /locus_tag="JQ356_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY4623952.1"
                     /translation="MNTKIKYGLSAAVLALIAAGAPAPEILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDSKPVVPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VSRRDQESALACWDIDR"
     gene            1746..1928
                     /locus_tag="JQ356_004036"
     CDS             1746..1928
                     /locus_tag="JQ356_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310767.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623953.1"
                     /translation="MAKYKRILLRLTMKNGLELKAPVTDDISRALAFAIKWVAVGVAV
                     SPMLYGLAKLVIALKS"
     gene            1943..2074
                     /locus_tag="JQ356_004037"
     CDS             1943..2074
                     /locus_tag="JQ356_004037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623954.1"
                     /translation="MSDKLITLAKILCVIVGISFSLMLVALFLSMAWMMLSSSGLLG"
     gene            2086..2260
                     /locus_tag="JQ356_004038"
                     /pseudo
     CDS             2086..2260
                     /locus_tag="JQ356_004038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371701.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
     gene            2493..2717
                     /locus_tag="JQ356_004039"
     CDS             2493..2717
                     /locus_tag="JQ356_004039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623955.1"
                     /translation="MKKLLVTVKPFQGTIPFRILQRGRVLVEGSFSGKCTQLHSRTFQ
                     VNATNEELTVECTMNAAKCRMVSAALQPVC"
     gene            3062..3388
                     /locus_tag="JQ356_004040"
     CDS             3062..3388
                     /locus_tag="JQ356_004040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000828066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HAY4623956.1"
                     /translation="MKRNLPLIILLSSLVMGCTQHKTDMPRQLVKALPQYPAYAAANY
                     IKGRVDVKFDIGADGTVTRIEFIRSEPHHLFDEQVVKAMAKWRFEKDRPCKGVKKTFI
                     FSPSAP"
     gene            complement(3520..3720)
                     /locus_tag="JQ356_004041"
     CDS             complement(3520..3720)
                     /locus_tag="JQ356_004041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000095744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3950 domain-containing protein"
                     /protein_id="HAY4623957.1"
                     /translation="MSSKNRTRRTTTRNIRFPNQMIEQINIALDLKGSGNFSAWVIEA
                     CRRRLATDATHLRPASMKNNEK"
BASE COUNT          938 a          830 c         1055 g          979 t
ORIGIN      
        1 gcaatggaac aaattgccgc ccactgtgag tcatattcgc cctgactttc cagaaccata
       61 cgaatcgccc tctgacggac ttcgggggaa aaacgagtat ttttagtcat cctgtttacc
      121 tctttctcag gaagtttagt ctccaggatt cccggggcgg ttcagtcctg cgctctgaag
      181 aagtccggag cgcactgaaa cagaaacttc gccagaatct tgagtcgcgt cttgatgcag
      241 aagtggatgc cattctggat gagctgctgg gcgtagcagc ggttcctgag ccggaaggta
      301 tcgcgggtga cgggagtgct tcagatggcg gtgaacctac acctgacagc gacatgatga
      361 tgtaagcatg cgcaagggac catcggtgtg tgccggtggt ctttatattg ttgtgagctt
      421 ccggattgcg ggagacgggg tatgtaccag atggaaaaaa tcacaacagg tgtgtcatac
      481 accacgtcag cggtgggaac gggctactgg ttcctgcagt tgctggacag gttttccccg
      541 tctcagtggg cggcaatagg cgtgctgggg agtctgttgt ttgggctgct gacatatctg
      601 actaacctgt atttcaaaat cagagaggac cgtcgtaagg cggcgcgggg agagtaaagc
      661 gatgaagaaa aaatacgaac tggttgttaa agggataaat aattacccga ataagattac
      721 tgttactgtg gcactggaaa ttggtgggta tccgtcactg ttgttgccag atgtggcgat
      781 tagtcttgac cgtactgaag atgccacgct ggagttttac gaagctgagg cgaaaaagca
      841 ggcgaagcag tttttcatgg atgttgctgc cgggttatgt gaaggggatg gtccgttgcc
      901 ggaaaagcgc cccgtaattt tagaggcgca ggatgtgttg ataacctaca gaggaaaact
      961 accgggaata attactggtt ctctgaagac tccaccgctg gcctgaagac ttaacatatc
     1021 cagggatttg aaatcgataa accctgataa atatccatga acaccaaaat caaatacggc
     1081 ctgtcggctg ccgttctggc gctgattgcc gcaggtgcgc ctgcgcctga aatcctcgac
     1141 cagtttctgg atgaaaagga aggtaaccac accacggcat accgtgatgg cgcgggtatc
     1201 tggaccatct gccgcggtgc catcctggtg gatagtaaac ctgtcgtccc gggcatgaag
     1261 ttgtcgaagg aaaaatgcga ccaggtcaac gccattgagc gtgataaggc gctggcatgg
     1321 gtggagcgca atattaaagt gccgctgacc gaaccccaga aagcgggtat cgcgtcattt
     1381 tgtccctata acattggccc cggtaagtgt ttcccgtcga cgttttacag acggattaat
     1441 gctggtgacc gcaggggagc atgcgaagcg attcgctggt ggattaagga cggtggcaga
     1501 gactgccgta tccgctcaaa taattgctac ggtcaggtat cccggcgaga ccaggaaagt
     1561 gcgctggcgt gctgggacat cgacagataa gcagaatatt ttgctgaaaa taaggcatga
     1621 gcacgcggac ggataacacg aaatcctgcg aactggcgaa acgtaagtga ataaaagtaa
     1681 aaaccccgtt tgttggcacc aggcggggtt ttgtgtttct gaccttgagt aaggcaaggg
     1741 agaacatggc gaagtataaa cgaattctgt tgaggttgac catgaaaaac ggccttgaac
     1801 tgaaagcgcc tgtaactgat gacatcagca gagcactggc ttttgccatt aagtgggtgg
     1861 cggtcggtgt tgctgtgtcc ccgatgctgt atgggctggc aaaactggtc attgcgttga
     1921 aatcgtgaag ggaggattaa gcatgtcaga caaactcata acgctggcga agatcctctg
     1981 tgtaattgtc ggcatttcat tttcactaat gctggttgct ctttttcttt ccatggcctg
     2041 gatgatgttg tcttcgtcgg ggctgctggg gtgaacataa accgaatgct ttccgcgttt
     2101 accgttattc tgctggtggt ctgtggtgcg ctgtggctgg caacagacca ttaccgtgat
     2161 aacgccatca cctacaaagc gcagcgcgat aaaaaagcca gagagctgga gctggcaaac
     2221 gcaaccatta ctgacatgca gcagcgccag cgtgatgttg ccgctggtcg taagcgcctg
     2281 cggatcaacg ccacctgctc cggtaccgtg cgtgaagcca ccggcacctc cggaatggat
     2341 aatgcaaccg gcccccgact ggcagacacc gctgaacggg attatttcac cctcagagag
     2401 cggttgatga caatgcagaa gcaactggaa ggggcgcagg aatatatccg cactcagtgt
     2461 attaactagt atttttgtta tccggagaat gcatgaagaa attactggta accgtaaagc
     2521 cttttcaggg aacaattccg ttccgtattt tgcagcgtgg tcgtgttctt gttgaaggtt
     2581 cgttcagtgg taaatgtacg caattacact cccggacctt tcaggtgaat gccacgaatg
     2641 aagagctaac cgttgagtgt acgatgaatg ccgctaaatg ccgcatggta tccgctgcat
     2701 tacagccagt gtgttgagcg accttattaa ccatgcgcgg tattgtcgcc gtatccccgc
     2761 attaacagag accgcagccc gaccgggaga ctcctctgcg cgagtgtgcg gggataatca
     2821 aaaacgatac acaccggggt ttaccgcgtt aacggagcgc ggcgttgtcc cctcatggtc
     2881 gctggtccgg tgcgatggtg gaagaaaccg gacgatgtgt tacctcgcaa gctctgttat
     2941 gtcatgtgtc tgatttgtga tttaagtcgg ataattgtcg ttgccattaa gcagaggatt
     3001 gatgaccgac agggtggcat tgttagaata agacttattc ttatctgtgc cgggaatgaa
     3061 aatgaaaaga aaccttccgt taattatttt gttgtcttct ctggttatgg gctgtacgca
     3121 acataaaaca gatatgcccc gacagttggt taaggcatta ccacaatatc cggcctatgc
     3181 agcggcaaat tatataaagg gacgggttga tgtgaagttt gatattggtg ctgatggtac
     3241 tgtcacccga attgagttta tccgttcaga gccgcaccat ttgtttgatg agcaggttgt
     3301 aaaggcgatg gcaaaatggc gatttgagaa ggacaggccg tgtaaaggcg tgaagaaaac
     3361 gtttatcttt agtccttctg caccctgatt atttcatcag aaattaatta tcactctgtt
     3421 gttattctgt acatcccggc agggtaagtc ttgttccgtc ggatatgaag atgaaatatt
     3481 gttggaggac agtgggtacc tgctcctgta accgaacgtt catttctcgt tatttttcat
     3541 gctggccggg cgcagatgcg ttgcatctgt tgccagcctt ctcctgcagg cttcaataac
     3601 ccacgctgaa aagtttcctg aacctttcag atcaagagcg atgttaattt gttcaatcat
     3661 ctggtttgga aatcggatgt tgcgggttgt tgttctgcgg gttctgttct ttgatgacat
     3721 aatgtttccc catattcagt gttgctgatt tgtattatct gaagttgctt ttacgttaat
     3781 ttgatgcaga tcaatcaata cg
//
LOCUS       DADKRT010000261         3780 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.266, whole genome shotgun sequence.
ACCESSION   DADKRT010000261 DADKRT010000000
VERSION     DADKRT010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3780
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.266"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..209)
                     /locus_tag="JQ356_004042"
     CDS             complement(<1..209)
                     /locus_tag="JQ356_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000680163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WGR domain-containing protein"
                     /protein_id="HAY4623958.1"
                     /translation="MRHFIYQDEKSHKFWAVEQQGNELHISWGKVGTKGQSQIKSFSD
                     AAAAAKAELKLIAEKVKKGYVEQAK"
     gene            complement(350..2383)
                     /gene="metG"
                     /locus_tag="JQ356_004043"
     CDS             complement(350..2383)
                     /gene="metG"
                     /locus_tag="JQ356_004043"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HAY4623959.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
                     NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
                     SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALAD
                     LANRYVDEQAPWVVAKQESRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
                     TELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAPVTGPLADDP
                     IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
     gene            2515..3624
                     /gene="apbC"
                     /locus_tag="JQ356_004044"
     CDS             2515..3624
                     /gene="apbC"
                     /locus_tag="JQ356_004044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HAY4623960.1"
                     /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
                     RPTSPDGTHMAPIMSHCLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
                     ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
BASE COUNT          905 a          969 c          970 g          936 t
ORIGIN      
        1 tccttcgctt gctccacata ccccttcttc accttctccg caatcagctt aagctccgct
       61 tttgccgctg ccgcagcatc tgaaaaactt tttatctggc tttgcccttt ggtgccaact
      121 tttccccaac tgatatgcaa ctcgtttccc tgttgctcaa ctgcccagaa tttatgtgat
      181 ttttcgtcct gatagataaa gtgtctcatt ctgcatccct gtaattttat ccagttgaat
      241 gcagatgcta ccagtattta tgcgggttag agagagacaa aatcgcaaga aaacaacttt
      301 aggaatttat aaagaaaagg cgctgtcgat gcagcgcctt gaagggggat tatttcacct
      361 gatgacccgg tttagcaccg gcatccgggc ttagcaggaa aatatctttc ccgccaggac
      421 cggcagccat caccatgcct tcagagatac cgaagcgcat tttacgtggt gctaggttag
      481 ccaccataat ggtgtgacga ccaatcagtg cctgcggatc cgggtaagca gaacgaatac
      541 cggagaagac attgcgtttt tcaccgccga gatccagcgt caggcgcagc agtttgtcag
      601 aaccttcaac aaactctgcg ttttcaatca gcgccacgcg caggtcaact ttagcgaagt
      661 cgtcaaaggt gatggtttcc tgaatcggat catctgccag cgggccagtt accggcgcgg
      721 cagcggcttt tacttcttct ttagaggctt ccaccagtgc ttcaacctgc ctcatatcga
      781 tgcggttata cagcgccttg aacggattca ctttgtggcc cagcagcggt tgctggatac
      841 catcccaggt cagttccgta ttgaggaatg cttctgcacg ctcggtcagt ttcggcagta
      901 ccggcttcag gtaagtcatc agcacgcgga acaggttgat gcccattgag caaattgcct
      961 gcaggtcggc atcgcggctt tcctgtttcg ccaccaccca cggagcctgt tcatcgacat
     1021 agcggttagc cagatcagcc agcgccatga tttcgcgcac ggctttacca aattcacggc
     1081 tttcccacgc ttcaccaatc acttcagcgg catcagtgaa ggttttgtac aactgcgggt
     1141 cagccagttc gcttgccagc acgccgtcaa aacgcttgtt gataaagccc gcattacggg
     1201 aggccaggtt aaccactttg ttaacgatat cggcattcac acgctgaacg aaatcttcca
     1261 ggttgagatc gatatcatcg atgcgcgaag agagtttcgc agtgtagtag taacgcaggc
     1321 tgtctgcgtc aaaatgattc agccaggtgc tggctttaat aaaggtgccg cgagacttgg
     1381 acatcttcgc gccgttcacc gtcacatagc catgaacaaa caggttggtc ggcttgcgga
     1441 agttgctgcc ttccagcatg gcaggccaga acaggctgtg gaagtaaacg atatctttac
     1501 cgatgaagtg gtacagctcg gcggtggagt ctttcttcca gtattcatcg aagcttacgc
     1561 tgtcgccgcg cttgtcgcac agattcttga aagaacccat gtagccaatc ggtgcgtcca
     1621 gccagacgta gaaatatttg cccggcgcgt tcggaatttc aaaaccgaag taaggtgcgt
     1681 cgcgggagat atcccactgt tgcaggccag attcaaacca ctcctgcatt ttgtttgcca
     1741 cctgctcctg caacgcaccg ctgcgggtcc atgcctgcaa catttcgctg aaagagggca
     1801 gatcaaagaa gaagtgttca gaatcacgca ttaccggggt agcgccagaa accaccgatt
     1861 tcggctcgat cagttcagtc gggctgtagg tcgcgccgca gacttcgcag ttatcgccgt
     1921 attgatccgg ggatttacat ttcgggcagg tgcctttcac aaaacggtcc ggcaggaaca
     1981 tgcctttttc cggatcgtac agctgagaga tggtgcggtt tttaataaaa ccgttttctt
     2041 tcaggcgaga gtagataagt tctgacaact ggcggttctc ttcgctgtgt gtcgagtgat
     2101 agttgtcata gctgatgtta aagcctgcga aatcagtctg atgctcctga ctcatttcgc
     2161 caatcatctg ctccggggtg ataccaagct gctgagcttt cagcatgatc ggtgtaccgt
     2221 gggcatcgtc ggcgcagatg aagttgacct cgtggccgcg cattcgctgg taacggaccc
     2281 agacatcagc ctggatgtgc tccagcatat ggccgaggtg gattgagccg ttagcgtacg
     2341 gcagtgcgca cgtcaccaga attttcttcg cgacttgagt catagtaggc attacttctt
     2401 aatagtgaaa aggggttaga tagtaccaaa tgggaaaatg ttaagtaagt acttctctat
     2461 attcttcagg taaactatca gctgatggtt tatctataca aaaaaggagt cgggatgaac
     2521 gaacaatccc aggccaaatc accagaagcc ttgcgcgcaa tggtcgccgg gacactggcc
     2581 aattttcagc acccaaccct gaagcataac ctcaccacgc tgaaagcgtt gcaccatgtc
     2641 gcctggatgg acgacacgtt gcatgtggaa ctggttatgc cattcgtctg gcatagcgcg
     2701 tttgaagagt taaaagagca atgtagcgcc gaactgctgc gtatcaccgg ggcgaaagct
     2761 atcgactgga aactgtcgca caatatcgcc accttaaaac gcgtgaagaa tcagccgggt
     2821 attaatggtg tgaagaacat cattgcggtc agttccggta aaggcggcgt gggtaaatcc
     2881 tccacggcgg taaacctggc gctggcactg gcggcggaag gggcgaaagt cggcattctg
     2941 gacgccgata tctacggccc atcaattccc accatgctgg gcgcagaaaa tcagcgtcca
     3001 acttcgccgg acggtaccca tatggcaccg attatgtctc attgcctggc aaccaattca
     3061 attggttatc tggtcactga cgacaatgcg atggtgtggc gtggaccgat ggcgagcaag
     3121 gcgttaatgc agatgttgca ggaaaccttg tggccggatc tcgactatct ggtgcttgat
     3181 atgccgccag gcaccggtga cattcaattg acgctggcgc aaaacattcc agtaactggt
     3241 gcagtcgtgg tcaccacccc gcaggacatc gcgttgatcg atgcgaaaaa aggcattgtg
     3301 atgttcgaga aagtcgaggt tccggtgctt ggtattgtcg agaacatgag tgtgcatatt
     3361 tgcagtaact gtggtcacca tgaaccgatt ttcggtaccg gtggtgcaga gaaactggct
     3421 gaaaaatacc acacacagct gctggggcag atgccgttac acatctcctt acgtgaggat
     3481 ctcgataaag gcacgccaac ggttatcagc cgtccggaga gcgaatttac cgctatctac
     3541 cgccagctgg ctgaccgcgt tgcagctcag ctctactggc agggtgaagt cattccaggc
     3601 gagatttcct tccgcgcggt ctaacgccta ttaaccattc tggttattct tcatacaccg
     3661 cagagatgtt acattgatgc ggtgtattag tttttgccgc attaatgaac acttatttaa
     3721 tactgcgaat attctgcgga ccttcgtccg aaactctaca aagtcgattg atcatacagg
//
LOCUS       DADKRT010000262         3759 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.267, whole genome shotgun sequence.
ACCESSION   DADKRT010000262 DADKRT010000000
VERSION     DADKRT010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3759
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.267"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..195
                     /locus_tag="JQ356_004045"
     CDS             <1..195
                     /locus_tag="JQ356_004045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004982904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C TorY domain protein"
                     /protein_id="HAY4623961.1"
                     /translation="RRAGYLLQGYQMQGSENTLYLAAGQRLALATLSEEGIKALTLNG
                     EWQAGEFSASNMVNRNTGCW"
     gene            135..1517
                     /locus_tag="JQ356_004046"
                     /pseudo
     CDS             135..1517
                     /locus_tag="JQ356_004046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707760.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            complement(1682..2653)
                     /gene="cmoB"
                     /locus_tag="JQ356_004047"
     CDS             complement(1682..2653)
                     /gene="cmoB"
                     /locus_tag="JQ356_004047"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HAY4623962.1"
                     /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
                     AVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRVVDVC
                     VTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP"
     gene            complement(2650..3393)
                     /gene="cmoA"
                     /locus_tag="JQ356_004048"
     CDS             complement(2650..3393)
                     /gene="cmoA"
                     /locus_tag="JQ356_004048"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HAY4623963.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MISMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
                     DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     HKAGFEHSELWFQCFNFGSLVALKAEDAA"
     gene            complement(3434..>3759)
                     /locus_tag="JQ356_004049"
     CDS             complement(3434..>3759)
                     /locus_tag="JQ356_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310606.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623964.1"
                     /translation="RLQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNG
                     AETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL
                     VFSLR"
BASE COUNT          997 a          935 c          994 g          833 t
ORIGIN      
        1 aggcgagctg gctacctgtt gcagggttat caaatgcagg gcagtgaaaa cacgctctac
       61 ctggcggcag gtcaacggct ggcgctagcc acattaagtg aagaaggtat caaggcgctc
      121 acgctaaacg gggaatggca ggctggggaa ttcagcgcca gcaatatggt gaacagaaac
      181 actggatgct ggtgacgctg gcggcggtgt tagggcagat tggtacaccg ggcggcggtt
      241 ttggtttctc ttatcattac tccaatggtg gcaacccgac acgtgttggc ggcgtgctgc
      301 cggaaatgtc tgcggcgatt gccggacagg ccagcgaggc cgctgatgat ggcggaatga
      361 gggcgattcc tgttgcccgt atcgtcgatg cgctggaaaa tcctggcggc aaatatcagc
      421 ataacggtaa agagcaaacg tatccgaata tcaaaatgat ctggtgggcg ggtggcggta
      481 actttaccca tcaccaggat actaatcgtc tgattaaagc atggcagaaa ccggagatga
      541 tcgtcgtttc tgaatgctac tggaccgcag ctgctaaaca tgcagatatc gtattaccga
      601 tcaccacatc gtttgagcgc aatgacttga cgatgaccgg tgattacagc aaccagcata
      661 ttgtgccgat gaagcaggct gtcgctccgc aatttgaagc gcgaaacgat tttgatgtgt
      721 ttgccgatct tgcggaatta ctgaaacctg gcggaaaaga gatctatacc gaaggtaaag
      781 atgaaatggc gtggctgaaa tttttctatg atgccgctca gaaaggtgcc cgtgcgcaac
      841 gcgtgactat gccgatgttt aatgccttct ggcagcaaaa taaactgatc gaaatgcgcc
      901 gcagcgagaa gaacgaacag tacgttcgtt atgctgattt ccgcgccgat ccggtgaaaa
      961 atgcgctggg tacgccaagc ggcaaaattg agatttactc caaaacgctg gaaaaatttg
     1021 gctataagga ttgcccggca catccaacct ggcttgcgcc tgatgagtgg aagggtaccg
     1081 ccgacgagaa gcagttgcag cttctgaccg cacatccggc acaccgttta catagtcagc
     1141 ttaactatgc ggaactgcgt aaaaaatatg cggttgcaga tcgtgaacca atcactattc
     1201 ataccgaaga tgctgctcgc tttggtattg cgaatggtga tctggtgcgt gtgtggaaca
     1261 aacgtggtca gattctgaca ggcgcggtgg tgactgacgg gatcaaaaaa ggcgtggtat
     1321 gcgtgcatga aggtgcatgg ccagatctgg aaaatggctt gtgtaaaaac ggcagtgcga
     1381 acgtgttaac ggcggatatc cccagctcgc agctggcaaa tgcctgtgcc ggtaactctg
     1441 cgctggtgta tatcgaaaaa tatacgggta acgcaccgaa gttaacggca tttgataagc
     1501 ctgctgttca ggcgtaagaa gtgaatagcg cccggaaacg ggcgctgagg ttatgcaaac
     1561 gtaaaactgc ctgatgcgct atgcttatca ggcctacata gtccctgcaa tagattgaat
     1621 tagcaagggt ttgtaggccg gataaggcat tcacgctgca tccggcagta ataccagacc
     1681 tttacggctt gcgcgcaatc agcaccgcgc gtttaggcgc aggataacct tcaactgtct
     1741 tactcggatc atgtgggtcg aggaaatcgg acagagattc ggtaaccatc cattcagtgc
     1801 gtcgctgctc ttcagtagtg gtaacgcaca catccacaac gcggatatct acaaaaccac
     1861 acttcttcag ccagtttttc agcgccagcg cggaagggat gaaatagaca ttacgcattt
     1921 gcgcgtaacg atcgcctggt accagcaccg tgttctcatc gccatcaata accagcgttt
     1981 ccagcaccag ttcaccctca ttcaccagtt gatctttcaa ctgccagaga tgctccagcg
     2041 gcgaacggcg atggtaaagc acgcccatcg aaaagacggt atcaaaggct ttcagtgccg
     2101 gaagctgttc aatacctaac ggtaacaaat gtgcgcgctg atcgttaccc agtagtttac
     2161 gcaccgcttc aaactggcac agaaacagtt gcgtagggtc gatccccacc gcgaggtgcg
     2221 cgcctgcgcc aatcatgcgc cacatgtgat aaccgctgcc gcagccgaca tccagaatgg
     2281 tgcgtccggt taaatcagaa agatggggca gaacacgatc ccatttccag tcggaacgcc
     2341 attcggtatc gatgttgacg ccatacagtg agaacggccc tttgcgccat ggcatcaggt
     2401 tccgcataag cgtttcaatg cgtttaattt gcccggtgct cagtggctct tcgctttcgg
     2461 cggttacgct atgcaataaa tccagacgat acggtttaat ttcaggcaga aattccaccg
     2521 cgttggacca ctgcttaaac agcccgtgct gctgctcgcg ctgccagtta gcaatctgcg
     2581 cgggcagcgt ttcgagccag tgtgaaagat gatttttggc aatcagagaa taaaagttac
     2641 caaagtcgat catgcagcgt cctctgcttt taatgccacc agtgaaccaa agttaaagca
     2701 ctggaaccac agctcgctat gctcaaaacc ggctttatgc aggcgtgctt tatgggtttc
     2761 cacggaatcg gtcagcatca cgttttccag catgctgcgc ttctggctga tctccagttc
     2821 gctgtaaccg ttggcacgtt taaagtcgtg gtgcatgttg aacaacagtt caccaacttt
     2881 ggcatcttcg aaactgaatt tttccgaaag caccagcgcg ccgcccgggt tcagtccttg
     2941 ataaatttta tccagtaatg cctggcgctc ggaaggttcc aggaattgca gggtaaaatt
     3001 cagcaccacc atcgatgcgt tttcaatggc gatatcgcga atatcacctt caatgacgtc
     3061 tactggcgta ggggctttat aggcgtcaat atgacgacgg cagcgttcaa tcatcgccgg
     3121 ggagttgtcg atggcaataa ttttgcaatt atcatgatga atgttgcgac gcaccgagag
     3181 cgtcgccgcg cccagagaac aacccagatc gtaaacctgc gtaccaggtt gaacgaagcg
     3241 ctcggctaac atactaatca tggaaataat attggaatag ccgggaacgg aacgctggat
     3301 catatccggg aagacttcag ctacccgttc atcaaaggtc cagtcgccca gtctggcgat
     3361 aggggcagaa aatagcgtgt cgcggtgaga cataacgtaa aaatccggga aaaagaaagt
     3421 ggcgtattgt gcgctaacgc agggagaaaa ccaactccca gggcatatac caaagattcg
     3481 ccagcaccat cagcaacagc gcacaccagg tggcgctcat gccggaacgt cgccagcgaa
     3541 acagacggtg atgaaaaccg taataatgca tcagacgacc agcaagcaaa acgatgccgc
     3601 aaatatgcac catccaggtt tctgcgccat tcatttccat aaacagcatc agcacaatcg
     3661 cgatgggaat atattccacc gcgttaccat gaatgcgaat agcgctttgc agttcgctaa
     3721 aaccaccgtc accataggca acgcggtact gcaaacgca
//
LOCUS       DADKRT010000263         3757 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.268, whole genome shotgun sequence.
ACCESSION   DADKRT010000263 DADKRT010000000
VERSION     DADKRT010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.268"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..1410)
                     /gene="maeB"
                     /locus_tag="JQ356_004050"
     CDS             complement(<1..1410)
                     /gene="maeB"
                     /locus_tag="JQ356_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HAY4623965.1"
                     /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
                     CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
                     EEARVLHATQELVTLGLAKP"
     gene            1699..2649
                     /gene="tal"
                     /locus_tag="JQ356_004051"
     CDS             1699..2649
                     /gene="tal"
                     /locus_tag="JQ356_004051"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY4623966.1"
                     /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL
                     SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF
                     DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGISAAEELEKEGINCNLTLLFSF
                     AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYE
                     TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS
                     EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
     gene            2669..>3757
                     /locus_tag="JQ356_004052"
     CDS             2669..>3757
                     /locus_tag="JQ356_004052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY4623967.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTGYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH
                     DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
                     GWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPK
                     DWEKTTQKYINELQANPAKIATRKASQNT"
BASE COUNT          926 a          980 c          971 g          880 t
ORIGIN      
        1 cggtttcgcc agtcccagcg ttaccagttc ctgagtggca tgcagaacgc gcgcctcttc
       61 cccttctggc agaacaacgc gcttcggcgc tttgcgagcc tgggagaaaa tcggcttcat
      121 aaacaggttg gttttgtaaa cgaactcagt cagcttgtcg atgtagacgt cgaaatcagc
      181 aatcggacgc gtcgccacgc ccgactccat cgcggcttta gcgaccgcag gagcgatctt
      241 aacgatcaag cgcggatcaa acggttttgg aatgatgtat tccggaccaa agctcagatc
      301 ctgatcgcca tacgctgaag ccaccacttc gctctgttcc gcatgggcga gttctgcaat
      361 cgcacgtacc gccgccagtt tcatctcttc gttgatggcg gttgcgccaa cgtccagcgc
      421 gccacggaag atgaacggga agcacaggac gttgttcacc tggttcggat agtcagaacg
      481 accggtgcaa atgatggcat ccggacgcac ttctttcgcc agcggcggca gaatttccgg
      541 ttccgggttc gccagcgcca ggatcattgg cgcacgagcc attttcttca ccatttcctg
      601 ggtcagcact ttcgggccgg aacatccgag gaaaatatcc gcgccttcaa tcacatcatc
      661 gagggtacgt ttgccgtcgt ccaccaccgc atatgcggct ttggtttccg ccatgtttgg
      721 ctcacggccc tgatagataa cgccttttga atcgcaaacc acgatgttat gtttttgcag
      781 acccagcgct accagcaggt tcatacaggc gattgctgcg gcacccgcgc cggaaaccac
      841 catccgcacg tcggagatgt ttttctccac cacgcgcaag ccgttgagga tggcggcagt
      901 gctgatgatt gccgtgccgt gctgatcgtc gtggaatacc ggaatattca tccgctcgcg
      961 cagtttctgt tcaatataga aacattctgg cgctttaatg tcttcgaggt tgattccgcc
     1021 gaaggtcggt tcgagcgcag cgacaacttc aataaatttg tccgggtcga gttcatcaac
     1081 ttcaatgtca aatacatcaa tcccggcgaa tttcttaaac agaacgccct tgccttccat
     1141 caccggtttg ccagccagcg cgccaatgtt gcctaacccc agcaccgccg taccgttaga
     1201 gatcaccgcc accaggttac cgcgcgcggt atatttgtag gcttttaacg ggtctttttc
     1261 gatttcaaga caaggtgcgg caacgcctgg tgagtaggcc agcgccagat cgcgctgcgt
     1321 tgccagaggc ttggttggag aaacctggat tttccctgga actggaaatt catggaaatc
     1381 aagtgcactt tgttttaact ggtcatccat ttggttgttc ctttcacgta acgttcacaa
     1441 ataaagtgtg tgggcaacag cccctgccca caacgtggcg cacattatta ccccgccgga
     1501 gtctacagac tttgagcaag tccaaactct caccattaat ataatgtttt ggtaataatc
     1561 ctataacact gatgttacct gcttaatcca gcaataccat gcctgtctgc tatgcttttt
     1621 tgatgcgttt agcgaaattt ctcagaagtg tgaattaacg cactcatcta acactttact
     1681 tttcaaggag tatttcctat gaacgagtta gacggcatca aacagttcac cactgtcgtg
     1741 gcagacagcg gcgatattga gtccattcgc cattatcatc cccaggatgc caccaccaat
     1801 ccttcgctgt tgctcaaggc tgccggatta tcacaatatg agcatttaat agacgatgct
     1861 atcgcctggg gtaaaaaaaa tggcaagacc caggaacaac aggtggtcgc agcgtgtgac
     1921 aaactggcgg tcaatttcgg tgctgaaatt ctcaaaatcg tacccggtcg cgtgtcaaca
     1981 gaagttgatg cacgcctctc ttttgataaa gaaaagagta ttgagaaggc gcgccatctg
     2041 gtggacttgt atcagcaaca aggcgttgag aaatcacgca ttctgatcaa actggcttcg
     2101 acctgggaag gaattagcgc ggcagaagag ctggaaaaag aaggtattaa ctgcaacctg
     2161 acgctgctgt tttcttttgc ccaggcgcgg gcctgtgcgg aagcaggcgt ttttctgatt
     2221 tcgccgtttg tcgggcgtat ttatgactgg tatcaggcac gcaagccgat ggacccgtat
     2281 gtggtggaag aagatccggg cgttaaatcg gtgcgcaata tctacgacta ctataagcaa
     2341 caccactatg aaaccattgt gatgggcgcg agcttccgtc gcaccgaaca aatcctcgcc
     2401 ttaaccggct gcgatcgact gactatcgca ccgaatttgc tgaaggagct gcaggaaaaa
     2461 gtttcgccag tggtacgtaa attaatccca ccttctcaga cgttcccacg cccagctccc
     2521 atgagcgaag cggagttccg ttgggagcac aatcaggatg cgatggcggt agaaaaactg
     2581 tctgaaggca ttcgtctgtt cgccgttgat caacgcaaac tggaagatct tcttgccgcc
     2641 aaactataaa ccagccacgg agtgttatat gtcccgaaaa gaccttgcca atgcgattcg
     2701 cgcactcagt atggatgcgg tacaaaaagc caactctggt catcccggcg cgccgatggg
     2761 catggctgat attgccgaag tgctgtggaa cgattttctt aaacataacc ctaccgaccc
     2821 aaccgggtat gatcgcgacc gctttattct ttccaacggt cacgcgtcga tgctgctcta
     2881 cagtttgctg catctgaccg gttacgacct gccgctggaa gagctgaaga acttccgtca
     2941 gttgcattcg aaaaccccag gccacccgga gattggttat acgcccggtg ttgaaaccac
     3001 caccggtcca cttggacaag gtttggcgaa cgccgtcgga ctggcgatag cagagcgtac
     3061 actggcggcg cagtttaatc agccggatca tgaaattgtc gatcacttca cctatgtgtt
     3121 tatgggcgac ggctgcctga tggaaggtat ttcccacgaa gtctgttcgc tggcgggcac
     3181 gctaggactg ggcaagctga ttggttttta cgatcacaac ggtatttcga ttgatggaga
     3241 aaccgaaggc tggtttaccg acgatacggc aaaacgtttt gaagcctatc actggcatgt
     3301 gatccatgaa atcgacggtc acgatccgca ggcggtgaag gaagcgatcc ttgaagcgca
     3361 aagcgtgaaa gataagccgt cgctgattat ctgccgtacg gtgattggct ttggttcgcc
     3421 gaataaagca ggtaaggaag aggcgcacgg cgcaccactg ggggaagaag aagtggcgct
     3481 ggcacggcaa aaactgggct ggcaccatcc gccatttgag atccctaaag agatttatca
     3541 cgcctgggat gcccgtgaaa aaggcgaaaa agcgcagcag agctggaatg agaagtttgc
     3601 cgcctataaa aaggctcatc cgcaactggc agaagagttt acccgacgga tgagcggtgg
     3661 tttaccgaag gactgggaga aaacgactca gaaatatatc aatgagttac aggcaaatcc
     3721 ggcgaaaatc gctacccgta aggcttcgca aaatacg
//
LOCUS       DADKRT010000264         3736 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.269, whole genome shotgun sequence.
ACCESSION   DADKRT010000264 DADKRT010000000
VERSION     DADKRT010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.269"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..859)
                     /locus_tag="JQ356_004053"
     CDS             complement(<1..859)
                     /locus_tag="JQ356_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HAY4623968.1"
                     /translation="MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPI
                     ADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNG
                     IPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVS
                     IIEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQL
                     NDQMKMPWVILSSGVDADIFGRAVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDV
                     SVPRLQRLAE"
     gene            complement(884..1762)
                     /gene="yihU"
                     /locus_tag="JQ356_004054"
     CDS             complement(884..1762)
                     /gene="yihU"
                     /locus_tag="JQ356_004054"
                     /EC_number="1.1.1.373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001318159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfolactaldehyde 3-reductase"
                     /protein_id="HAY4623969.1"
                     /translation="MATIAFLGLGQMGSPMANNLLQKGHSLQVFDVNAQAVDALVTQG
                     ATAAQTQAEAAAGAEFIITMLPNGDIVRQVLLGEKGVCEAVSSDALLIDMSTIHPLQT
                     DALIRELQEKGISMMDAPVGRTSVNAIDGTLLILAGGTDEQIARARPILMCMGNELVE
                     AGGPGMGIRVKLINNYMSIALNALSSEAAVLCESLGLNLDVAIKVMSGTAAGKGHFTT
                     TWPGKVLKGDLSPAFMVDLALKDLRIAVDVARETGTPLNMGIAAESYYAAASQDGKGR
                     QDWSALLNQVRQQAGL"
     gene            1935..2831
                     /locus_tag="JQ356_004055"
     CDS             1935..2831
                     /locus_tag="JQ356_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000196715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY4623970.1"
                     /translation="MTRIACVGITVQDRIYSLPTLPEGGGKYQANHYLEIGGGPAATA
                     AVAIAKLGVEVDFIGRVGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQH
                     GERIIVNYPSPDLGTDAEWLEAIDFSRYNLILADVRWHSGTEKAFSLARLAGVTTLLD
                     ADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGS
                     LWIEDGHLCQQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCT
                     QPGGRAGIPNREQTESFLSLYA"
     gene            2871..3659
                     /locus_tag="JQ356_004056"
     CDS             2871..3659
                     /locus_tag="JQ356_004056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY4623971.1"
                     /translation="MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRD
                     IRKLSEQGLITRHHGGAGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTVFI
                     TIGTTVEAVARALLNRRDLRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPG
                     AVDFIEGFRADYLITSIGAIEHDGTLLEFDLNEALVARTMIKHARNTLLVADHTKFAA
                     SAAVSIGNARNVRAFFTDAPPPNSFCQLLSEENVELVVAEQEVS"
BASE COUNT          961 a          955 c          902 g          918 t
ORIGIN      
        1 tttctgccaa ccgttgtaaa cgaggaacag agacatcgcg cagcatagtt tgtggatctt
       61 gtgcaccaac aaccgacgcc caaaccgctc gtccagccag gaagcccgac gcaccacctt
      121 tcatggcaat acttactgca cggccaaaaa tatcggcatc aacgccagaa gaaagaatta
      181 cccacggcat cttcatctga tcgttaagtt gctgacaggc ggcaagtaag gttttttcat
      241 cgcctttgcc ccctaatggc atctcggctt tgtaaagatc agcctctgtt ccaccaagct
      301 ctgcggcggc ggcaacaatg gcgctttcac gatcaaagtc ccaaccgcga cgaggtggac
      361 gcaccacagg ttcaataatg ctcaccagcc cggcactacg gcagcgacga acaaatttat
      421 caaccattgc cagacgttcc tctgcgggtt catcttcacg ccagagtaca agtaatttca
      481 ttgccttagc ccccatttca cgggctttat gcgggtcgac ggacatatct atttcaacgc
      541 tatcaaccgg gatgccatta cctgggataa aaagatcggc agcgacaatc aggccgcaag
      601 aattagcaac agcgccctgc tcgactattt gctcaagaca aaattgttta tccgccagaa
      661 cggcagaagc ataaggagaa aggattcggg tcgcggcaac tttaaaatcg gtgagtacac
      721 tgtcggcgat gggttttggc tgccctgctg ccgcaaacat caagcgcatg gcctcacgct
      781 gatcgacagc taacatggca aatccaccac ctgggcggga gatatctttc agcgtaaatg
      841 gggtgaagtg ggatgacata gaaactcctg ttaatagata aaattaaaga ccagcctgct
      901 ggcgaacctg atttagcagg gcactccagt cctgccgccc tttgccgtct tgacttgctg
      961 cagcgtaata actttctgct gcaatcccca tattgagcgg tgtccccgtc tcccgagcga
     1021 cgtcaactgc aatacgcaga tctttcaacg ccagatccac catgaaggcg ggtgaaagat
     1081 cgcctttcag cactttgcca ggccaggtgg tcgtaaaatg tcctttccct gctgccgtac
     1141 cactcatcac cttaattgcg acatcaagat ttaatcccag tgactcacat aacacagcgg
     1201 cctcggagga cagcgcatta agcgcaatgc tcatatagtt gttaattagc ttcacgcgga
     1261 tccccattcc tgggccgcca gcctcgacca gctcattacc catgcacata agaatcgggc
     1321 gtgcacgtgc aatctgctca tcagtgccac ccgctaaaat cagcaatgtg ccatcaatcg
     1381 cattcacgga cgttctgccc acgggagcgt ccatcatact gatgcctttt tcttgtaact
     1441 cccgtattaa tgcatcggtc tgtaagggat gaatagtcga catatcaatc aataacgcgt
     1501 cagatgaaac agcctcacag acgccttttt cccccaacag aacctgtcga acaatgtcac
     1561 cattgggaag catagtgatg ataaattcag cgcctgctgc tgcttccgct tgggtttgtg
     1621 ccgcagtggc cccctgcgta actagcgcat cgacggcctg tgcattgaca tcaaatacct
     1681 gcaatgaatg ccctttttgc aatagattgt tagccattgg gctacccatc tgccccagcc
     1741 cgagaaatgc aatggttgcc atgaatactc tcctgtctga cattgacaaa ataatgacaa
     1801 ttgaaaattc gtttttgtct gtttttgagc atatttgtga tttatgttca aaaacacgac
     1861 acgcatcact aatttgatca tttgcgtcat ttaaattgac caaagacgac aaaattaaac
     1921 aggacaagac aaatatgacc agaattgcat gcgtgggtat cacagttcag gacagaattt
     1981 attctttgcc cactctgccg gagggcggcg ggaaatatca ggcaaatcat tatcttgaga
     2041 ttggtggcgg cccggcagca acagccgctg ttgcaatcgc aaagcttggc gtggaggttg
     2101 atttcatcgg tcgcgtcggc gatgacagtt gtggaaatac cttacttgca gaacttgagg
     2161 gttggggcgt caataccgca ttttgccgcc gatatcctaa cgcccgttcg tcgcaatcag
     2221 cgatcctcgt tgatcagcat ggcgaacgga ttatcgttaa ttatccaagt cctgatctcg
     2281 gtactgatgc cgaatggtta gaagcgatcg atttctctcg ttataatctg attctggccg
     2341 atgttcgctg gcatagcggt actgaaaaag cattctcgct agcgcgcctt gcgggtgtga
     2401 caacgctttt agacgccgat atgacaccgc aggatatttc tccacttgtc gcgcttgccg
     2461 atcacgccgt gttctcaaca ccagggctga aacgcatgac tggcctgcag tctcctgaag
     2521 aaggtttgtt ccaggcaacg acacaaacag caggtaaagt gtatgttacg ctgggttctg
     2581 aaggatcgtt gtggattgaa gatggtcatt tgtgtcaaca ggaggcattt tctgtcaatg
     2641 tggttgatac cactggagca ggcgatgttt ttcacggcgc actcgcggta gcgttggcag
     2701 aaaaaatgcc aacaaaagag gctattcgtt ttgccagtgc ggttgccgcg atgaaatgta
     2761 cccagcctgg cggtcgggcc ggcattccta atcgtgagca aaccgaatca tttttgtcac
     2821 tttatgcgta aaatggtaaa catctaccga ggaggggcaa gggagtattc atgagtatca
     2881 tcgaagtgac aggtaatcca cgccatgacc aactcgttca tctaatcgca gaacgcggtt
     2941 atatgaatat tgaagaactg gcacaactgc tggatgtttc aacgcaaacc gtgcgccggg
     3001 atatccgaaa actcagtgag cagggcttga tcacccgtca tcatggaggg gccgggcgcg
     3061 tctccagcgt catgaatacc gcttttgagc aacgggaact ttcgctcacc gccgagaaac
     3121 gggcgatcgc tgaggcagtc gccgattacc ttcccgaacg ctgtaccgtc tttatcacca
     3181 tcggtacaac cgtagaagcc gttgccaggg cattactcaa ccggcgtgat ttacgcatta
     3241 tcactaacag cctacgtgtg gcacagattc tttataagaa tcaggatatt gaagtgatgg
     3301 tgccgggagg cactttacgc gctcataacg gcgggattat cggcccagga gccgtggatt
     3361 ttattgaagg cttccgcgca gattatttaa tcaccagtat aggtgccatt gaacatgacg
     3421 gcaccctact ggaatttgat ctaaatgaag cgttagtcgc gagaacgatg attaaacatg
     3481 cgcggaatac attgttagtg gccgatcata cgaagtttgc cgcgtctgct gccgtttcaa
     3541 ttggcaatgc acggaatgtc agggcttttt ttactgatgc cccgcctccc aattctttct
     3601 gccagttgtt aagtgaagag aatgttgaac tggtggttgc cgagcaagaa gtatcctgaa
     3661 attgaaattt cggaaaatcc gctgggaatt tcagcggatt ttgttttcca taagcaaaaa
     3721 aaacctgcca gcgatg
//
LOCUS       DADKRT010000265         3723 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.270, whole genome shotgun sequence.
ACCESSION   DADKRT010000265 DADKRT010000000
VERSION     DADKRT010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.270"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            37..264
                     /locus_tag="JQ356_004057"
     CDS             37..264
                     /locus_tag="JQ356_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY4623972.1"
                     /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS
                     AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE"
     gene            complement(265..639)
                     /locus_tag="JQ356_004058"
     CDS             complement(265..639)
                     /locus_tag="JQ356_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309456.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HAY4623973.1"
                     /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD
                     GDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
                     FQLEPPLDTEEGRAAADEWDER"
     gene            complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JQ356_004059"
                     /pseudo
     CDS             complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JQ356_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtG"
     gene            complement(2118..3038)
                     /locus_tag="JQ356_004060"
     CDS             complement(2118..3038)
                     /locus_tag="JQ356_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HAY4623974.1"
                     /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL
                     GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
                     RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL
                     IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
                     AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
                     VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            3263..3723
                     /locus_tag="JQ356_004061"
                     /pseudo
     CDS             3263..3723
                     /locus_tag="JQ356_004061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415573.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
BASE COUNT          915 a          952 c          945 g          911 t
ORIGIN      
        1 cgttatgccg gtattttttt acggaagagg tatcaaatgc gtttaattgt ggtgagcatc
       61 atggtgacct tgctgagtgg ctgtggcagc attattagtc gcactatacc ggggcagggg
      121 catggcaacc aatattatcc cggtgtgcaa tgggatgtgc gtgactccgc ctggcgttat
      181 gtcacaatcc ttgatctgcc attctccctg gtttttgata ctttactgct gccgatcgac
      241 attcatcatg gcccgtatga gtgattaacg ttcatcccac tcatcagctg ctgcgcgtcc
      301 ttcctcggta tccagcggtg gctcaagctg aaattccccc tcgtcccatt catgtaatgt
      361 attctcttcc tgccactcct ggcgtatctc tatctcatca tagtcgccat caaaaacact
      421 ttgcgcggct tcaccgctaa gcataggtaa acattcacct tcttcccctt cgtcggcaaa
      481 aaactcaact tgccacatga tgtcgccgtc ctgcaaaacg tatttttggg cattgaactg
      541 ttgcacattc gcatcttcgg cgtcgatgcc ggggttgtct gcaagaaatt cttcgcgtgc
      601 agcgtcaatg gcttcttcaa gcgttgcgta catggtcatc acgattctcc ctttgagttg
      661 atgaggtttc agggaaaagg atagctgatt ctccgctttt gcaagtatga aaggcgaaaa
      721 atcagttcga tacctggggt attcgacgac gacgtagact gttccatgaa tagactgcgt
      781 tgaataacac tacgccagcg gtgacgagaa ataccgctct gaaaccgtag ttcgctgaaa
      841 tcgctgctcc catcaatggt ccggtaacgt tgccaatatc acgaaacgat tggttatagc
      901 tgaagatacg cccggcgatc tggttgctcg agttgtaaac caacaatgtc tgtacggcgg
      961 ggagtagtgc accatcggcg gcaccgagca aaaaacgtaa aatcccaagt tgcaatggcg
     1021 tctgaacgta agacattggg atcaacagca gtacagaaaa gatcagcgct gtaatcagga
     1081 tcttttcggg tccgattcga tcgccaagtt tgccgagtcg tggtgcactt agcagagccg
     1141 ccacgcctgg caccgaggcg atcatgccac tgataaaggc gacgttactg acgttacccg
     1201 ccagttcgcg gacatacagc gtcagaatgg gggcaattga gcccgtcgcc acctggatga
     1261 ttaacgtagt gacaaacagg ctgagtacca gtttcgggtt tttaagtgat gtcaccactt
     1321 cccgcatgtg cagcatctct tttttgctga ccggctggaa tttttctctg atgcaaaaca
     1381 gggtgacgaa aaagcagagt atgagcacac tggtggtaat aaagaatacc ggacgtaagc
     1441 cgtagctatc ggcgagcagg ccgccagcca ttgggccgag caacgcacca ccaacgccgc
     1501 ctgtggagag cgtacccagc gcccagccgc ttttattacg cggtacttgt gtggcgataa
     1561 gagcattagc gttggggaca aatccgccaa gtaacccaag aagcgcccgc aggatcaaaa
     1621 actgccagat attttgtgcc agccccatca acaccatcac gatgcccatg ccgagggcag
     1681 agcgtaatag catgagtttt cggcctttac ggtcggcgag tccaccccaa aacggtgagg
     1741 cgatggccga aaataaaaat gtaatgctga agacaatacc ggaccatatt cagggcggag
     1801 tgaccggtaa cgccaagctg ctcaacgtag aggggtaaga agggcattac cagactgaag
     1861 gcggcaccgg taagaaaaca gcctagccag gcgacgatca ggtttcgttt ccagtttata
     1921 ggggtgtcat tttcacaggg tgacatagca atccgctgtt ggtgcgccag gcgcggtgaa
     1981 cataagaaga aaagataagc acactaatta tgcgcccgac ttccaggggg cgcaatccag
     2041 agagctttta tcgctaaatc agggggattt gctgtggtaa tgccggatgc cattctgaag
     2101 catccggcag gggagattta atagcgtgaa ggaacgcctt ccgggcgtgt tttaaagcga
     2161 cggtgtaacc acatatactg ctctggtgcc atcatgatgc atttttcgac cactttgttc
     2221 atccacgcgg cggtagtttc ggcatcatcc agtggcggag aacactctgg cggcagcata
     2281 atcaattgat accctttgcc atctggctta cggcgtggaa cgaagggcac cagacatgcg
     2341 ccggacatcc gtgccagcat ccaggttccg gtcgtggtcg cagcctgctc aacggcaaat
     2401 aacgggacga aaacgcttga gcgcgggccg taatcatgat ccggtgcgta ccagaccact
     2461 tcgccttttt tcagggcttt aatcatgcct tttaaatctt tgcggtcgag catcgattta
     2521 tttgagcgca aacggcccca ggtttgtagc cagtcaatca gtggattatc gttcgggcgg
     2581 taaacgccaa tccccggttc ctgcatacca aactgccgcg cacccagctc cagtgtcaga
     2641 aaatggatgc caactaacag gatgccgcgt ttttgcgcct gcacgtcacg aatgtgttcc
     2701 atgccgatca cttccgtcca gcgcgcgatt cggcggtccg gccagaacca cgccatgccg
     2761 gtttccatca ggcccatgcc aacggattcg aaattcttca ccaccatttt acggcgttct
     2821 tgttcgctca tttccgggaa gcacagttcc aggttgcgat gcacaatttt tgcgcgtcgt
     2881 ttcataaaac gtaacgccag ttttcctaat ccacaaccga ggcggtagat aaccgggtag
     2941 ggcaattgca cgactaacca aagtacgcca atacccaacc aggttaacca ataacgcgga
     3001 tgaagcagtg cggtggagaa cttgggtaga ttcgtcatat caatcctgtt tttcaaccta
     3061 ttcgggcaat tgtatgtatt gtcgcatttt ttcgcccgca accaaaattt gtggctgaag
     3121 actgggcgaa attgccgcgc ttgtaaataa caaataattt ttaatgcgca aatgtagcgt
     3181 aaaatgtgtg gatgttaatt atcgataatt gctatatcat gccgcggatt tttactttcc
     3241 catctcgcag gaaccgtaca ccatgccagt gttacacaac cgcatttcca acgacgcgct
     3301 aaaagccaaa atgttggctg agagcgaacc gcgaaccacc atttcgtttt acaagtattt
     3361 ccacatcgcc gatcctaagg cgacccgtga cgctttatat cagctgttta ccgcgctgaa
     3421 tgtttttggg cgagtgtatc tggcgcatga gggcattaac gcgcaaatca gcgtacctgc
     3481 gagcaatgtt gaaacatttc gcgcgcagct ctgccttcga cccggcttta gagggtttac
     3541 gcctgaatat cgcgttggat gatgacggga aatccttctg ggtactgcgc atgaaggtac
     3601 gtgatcgcat tgttgccgac ggtattgacg atcctcactt tgatgccagc aatgttggtg
     3661 agtatctgca agcggcggaa gtgaacgcca tgcttgacga tcccgatgca ctatttatcg
     3721 aca
//
LOCUS       DADKRT010000266         3680 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.271, whole genome shotgun sequence.
ACCESSION   DADKRT010000266 DADKRT010000000
VERSION     DADKRT010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3680
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.271"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(122..2191)
                     /gene="glyS"
                     /locus_tag="JQ356_004062"
     CDS             complement(122..2191)
                     /gene="glyS"
                     /locus_tag="JQ356_004062"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HAY4623975.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGT
                     VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
                     LEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV
                     ADISLLQ"
     gene            complement(2201..3112)
                     /gene="glyQ"
                     /locus_tag="JQ356_004063"
     CDS             complement(2201..3112)
                     /gene="glyQ"
                     /locus_tag="JQ356_004063"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HAY4623976.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            complement(3207..3506)
                     /locus_tag="JQ356_004064"
     CDS             complement(3207..3506)
                     /locus_tag="JQ356_004064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623977.1"
                     /translation="MMMNAFFPAMALMVLVGCSTPSPVQKAQRVKVDPLRSLNMEALC
                     KDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
BASE COUNT          850 a         1001 c          947 g          882 t
ORIGIN      
        1 atctcataaa attaatatat gagataatct ttattcagca gaagattatt aaaggttgct
       61 gtattattta gcgataataa aaaaagcctg ccagatggca ggctttttaa taacggcgtt
      121 attactgcaa cagcgaaata tccgcaacgc gcaggaacag ttcgcgcagt ttctccagca
      181 tggtcagacg gttgagacgc aattctttgt catcaaccat gaccatcact ttatcgaaga
      241 aagcatcaac cggctcacgc agctctgcca gttcgaccag cgcatcctgg taacgacctt
      301 ccgcaaagta cggctccagc ttgtcacgta gcaccacaac ctgcatcgcc agtttaattt
      361 cttccggctc tttcagggta gaggcattca cgcggtcgct cagcacttcg tcagatttcg
      421 ccagaatgtt agatacacgt ttgttcgccg ccgccagtgc agcagctgca tccagggtac
      481 ggaaatgcga taccgctttc atacgggcat cgaaatcagc cggacgagtc ggacgacgcg
      541 ccagtaccgc ctggatggtg tcaacggtgt aaccttcgtc ctgataccag gcgcggaagc
      601 gaccgagcat aaagtcgata acatcatcaa ccacgttggc gttagtcagc ttatcgccat
      661 acagacgcac tgcttcttcg gtcagcgttt gcagatcaag gttgaggttc ttctcaacga
      721 taattcgcag cacgccaagt gcggcacgac gcagcgcaaa cgggtctttg tcgcctttcg
      781 gatgctgacc gataccgaag atacccgcca gagtatccat cttatcagca atcgccagcg
      841 cacaagctac cgggttggac ggcaggtcat caccggcaaa gcgcggctga tactgctcat
      901 tcagcgcgac ggctacgtct tccgcttcgc catcgtgacg cgcgtagtgc atccccataa
      961 cgccttgggt gtcggtgaac tcgaagacca tgttggtcat caggtcacac ttagacagca
     1021 ggcccgcacg ggttgcgtgg ttaacgtcag cgccaatctg ttcagcaatc cagccagcca
     1081 gcgcctggat gcggtcagtt ttgtcacgca gcgtacccag ctgttgctgg aacagcacgg
     1141 tttgcaggcg cggcaggtta tcttccagac gttttttacg gtcggtattg aagaagaact
     1201 cggcatccgc cagacgtgga cgaacgactt tctcgttacc agagataatt tgctgcggat
     1261 ctttcgattc gatgttggca acgaagatga agttcggcag cagtttgcca tcgttcgcat
     1321 acaccgggaa gtatttctgg tcacctttca tggtgtaaac cagggcttca gccggcaccg
     1381 cgaggaattt ctcttcgaat tttgcggtca gaacgaccgg ccactccacc agcgaagcca
     1441 cttcttccag caggctttcg cttaagtcag cgttaccgcc aatcttacgc gctgcttctt
     1501 cggcatcggc tttaatcttc gctttacgtt cttcgtaatc ggcgatgact ttcccgcgct
     1561 cacgcagaat ttccggatac tgatcggcgt tgtcgatggt gaattccggt tcgcccataa
     1621 agcggtggcc gcgaatcacg cgatcggact gaatgcccag aatagttgcc ggaatgactt
     1681 tgtcgcccag cagcagggtc acggtgtgca ccggacgcac gaagtgcacg tcgcttgcgc
     1741 cccaacgcat cagtttcggg atcggcagtt tcgccagaga agtcgcaacc atattcggca
     1801 gcagtgcttc ggtgctttcg cccttcacat gggcgcgata cagcagccat tcgcctttat
     1861 cggtagtcag acgctcagcc tggtcaacgg taataccgca accacgcgcc caaccttctg
     1921 ccgctttgct cggtttgcct tcagcgtcga acgcctgggc aatcgccggg ccgcgttttt
     1981 cgatttcacg atccggttgc gcttccgcca ggttagctac tttcagcgcc agacgacgcg
     2041 gagcagcaaa ccattgaacg gtgccgtgtg cgaggccagc gttatccagc tccacagtaa
     2101 aattcgcagc aaaggactca accaggctgc gcagtgcttt tggtggcagc tcttcagtgc
     2161 cgatttccac cagaaaagtt ttctcagaca tagccgcctc ttacttatct ttgttgcaca
     2221 tcgggaagcc gagggcttca cgggaagcgt agtatgcttc tgccactgct ttggtcaggg
     2281 tgcgaatgcg cagaatgtag cgctgacgct cggtgacgga gatggcttta cgcgcatcca
     2341 gcaggttgaa gctgtgggcg gctttcagaa tacgctcgta ggctggcagc ggcagcggat
     2401 tttccagcgc cagcagctgc tgcgcttctt tctcgtactg ctcaaagcag gtgaacagga
     2461 agtccacatc cgcgtattcg aagttgtaag tggactgctc cacttcgttc tgatggaaca
     2521 cgtcgccgta ggtggtttta cccagcgggc cgtcgctcca gaccaggtcg taaacgctgt
     2581 ctacgccctg aatgtacatg gccagacgtt ccagaccgta ggtgatctcg ccggtaaccg
     2641 gtttacactc cagaccacca acctgctgga agtaagtgaa ctgcgtcact tccatgccgt
     2701 ttagccacac ttcccagccc agtccccagg cacccagagt cgggttttcc cagttatctt
     2761 ccacgaaacg gatgtcgtga atagtcgggt ccatgcccag ctctttcaga gaaccgaggt
     2821 acagctcctg aatattgtcc ggcgatggct taatgaccac ctggaactga tagtagtgct
     2881 gtaaacggtt ggggttttcg ccgtagcgac catcggtcgg gcgacgagaa ggctgaacat
     2941 aagcagccgc catcggttct ggccccagcg cgcgcagaca ggtcattggg tgagaggttc
     3001 ccgcgccgac ttccatgtcc aatggttgaa caatggtgca gccctggcga gcccagtaat
     3061 cctgtaaggt caggatcaag ccctggaagg tcctggtatc aaacttttgc atattatttc
     3121 gtgctggata cgtgtggatt taaaggaagg gatcagtata cccgctggat ggaagatata
     3181 cagtacgaaa cgggaaaaag cagggcttaa cgcatggaaa gatgcaaaaa atggccatct
     3241 gcgtcaaaag aacagacaaa ctgctcttta cggaaggtat aaccgcgcat ttcatagctt
     3301 ccctggaact gttcgaaggc ggtgacgtcg attttttgct cgccggtgtt ataacgtttt
     3361 gccgcctgat ccttgcataa cgcttccata ttcaacgaac gcagaggatc aacctttacc
     3421 cgttgtgctt tctgcacggg tgacggtgta gaacaaccca ctagcaccat aagcgccatt
     3481 gccggaaaga aagcgttcat catcattaaa ttaccgtctg gtttgcaggt gagtcttatt
     3541 atttatatcg gtatagtggc tgatatctta cgaatttcct taagcctcta taagctgtag
     3601 tgataaaact cagattattc cagtgcgcca accaaatgat ttatcggtca gacttttttt
     3661 aaccagatac agagacacag
//
LOCUS       DADKRT010000267         3678 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.272, whole genome shotgun sequence.
ACCESSION   DADKRT010000267 DADKRT010000000
VERSION     DADKRT010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3678
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.272"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(168..482)
                     /gene="fliE"
                     /locus_tag="JQ356_004065"
     CDS             complement(168..482)
                     /gene="fliE"
                     /locus_tag="JQ356_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HAY4623978.1"
                     /translation="MSAIQGIEGVISQLQATAMSARAQDSLPQPTISFAGQLHAALDR
                     ISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSM
                     QV"
     gene            697..2355
                     /gene="fliF"
                     /locus_tag="JQ356_004066"
     CDS             697..2355
                     /gene="fliF"
                     /locus_tag="JQ356_004066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body M-ring protein FliF"
                     /protein_id="HAY4623979.1"
                     /translation="MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAK
                     APDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGL
                     PKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPS
                     LFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLT
                     LSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTE
                     EQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPISTPPANQNN
                     RQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGK
                     PLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ
                     LLAAGRWLLVLLVAWLLWRKAVRPQLTSRAEAMKAVQQQAQAREEVEDAVEVRLSKDE
                     QLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINNDHE"
     gene            2348..3343
                     /gene="fliG"
                     /locus_tag="JQ356_004067"
     CDS             2348..3343
                     /gene="fliG"
                     /locus_tag="JQ356_004067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HAY4623980.1"
                     /translation="MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANV
                     TQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRD
                     TASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLR
                     VATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
                     REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLR
                     NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
     gene            3336..3678
                     /locus_tag="JQ356_004068"
                     /pseudo
     CDS             3336..3678
                     /locus_tag="JQ356_004068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416450.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
BASE COUNT          925 a          967 c         1028 g          758 t
ORIGIN      
        1 cttcctatga gcaaagcgaa gacaaaacat gttatcgcgt ttacggatcg tggatggcag
       61 aaaactttca ggatcaggta tccattttaa accagaaata gggtgagttt gtcccatcca
      121 tgccccacgc gggcagatgg gatgtaatta ccaacaggtt acaaaaccta cacctgcatg
      181 gacatcactt cctgatacgc cgccaccagc ttattacgca cctgaatccc catttgcata
      241 gaaactgagg ctttttgcat atcggtcatc acatcgttta acgccacgcc gggttcaccg
      301 agggtgaatt tttctgcctg cgtgcgggcg gctgtttgtg tatcgcttat gcgatcgagc
      361 gcggcgtgca gctgcccggc aaaactaatg gtcggttgcg gcagtgaatc ctgcgcacgc
      421 gcactcatcg ccgtagcctg taactggctg ataacccctt caatcccctg tatcgctgac
      481 attttcgtct cctggataat ttctggtagc aaagcctacc agtaagtcaa taagacaaag
      541 gcgctaaata gcaacaaaaa aacgggttta ttggcggata gaaaaaaacg aaagcacaaa
      601 taatggcagc gtcaattttt cgagtttgct gacccgggag tgagtcttgt tccactttgc
      661 caataacgcc gtccataatc agccacgagg tgcgcgatga atgcgactgc agcccagaca
      721 aaatctcttg agtggcttaa tcgcctgcgt gcgaatccga aaattccatt gattgttgcc
      781 ggttccgcgg cagtggcggt catggtcgca ctgatcctgt gggcgaaagc ccccgactac
      841 cgcacattat tcagcaatct ttccgatcag gatggtggcg caattgtcag ccaactgacg
      901 caaatgaata ttccttaccg cttcagcgaa gccagcggcg ctattgaagt tccggcagat
      961 aaagttcacg agctgcgtct gcgcctggcg caacaaggtt tgcccaaagg cggcgcggtc
     1021 ggtttcgaac tactagatca ggaaaagttt ggtatcagcc agttcagcga acaggtgaat
     1081 tatcagcggg cgctggaagg cgagctttct cgtaccatcg aaactatcgg cccggtaaaa
     1141 ggggcgcgcg tacatctggc aatgccgaaa ccgtctttat tcgtccgtga acaaaaatcc
     1201 ccttctgcat cggtgacggt aaatctatta cccggccgcg cactcgatga agggcaaatt
     1261 agcgccattg tacatctggt ttccagcgcg gttgctggtc tgccgccggg gaacgtcacg
     1321 ctggtggatc agggtggaca tctgttaacc ctgtccaata ccagcgggcg cgatcttaat
     1381 gacgctcagt tgaaatatgc cagcgatgtc gaaggccgga ttcagcggcg tattgaagcg
     1441 atcctgtcgc caattgttgg taacggtaat attcacgccc aggtcacggc gcaactggac
     1501 ttcgccagta aagaacaaac ggaagaacag tatcgcccta acggtgatga atctcatgcg
     1561 gcgcttcgtt cacgccagct taatgagagc gagcaaagcg gttccggtta tccgggcggc
     1621 gtaccggggg cgttgtcgaa tcaaccggca cctgcgaata acgcgccaat cagcacgcct
     1681 ccggcaaatc aaaataaccg ccagcagcag gcgagcacca ccagcaatag cgggccgcgt
     1741 agcacacagc ggaatgaaac cagtaactac gaagtcgatc gcaccattcg tcataccaaa
     1801 atgaacgtgg gcgatgtgca acgtctgtca gtcgcggtag tggtaaatta caaaaccttg
     1861 ccagacggta aaccattgcc tctcagcaac gaacagatga agcaaattga agatctgacc
     1921 cgcgaggcga tgggcttttc tgaaaaacgc ggtgactcgc tcaatgtcgt taactcgccg
     1981 ttcaatagca gtgacgaaag cggcggagaa ctgccgttct ggcaacagca agcgtttatc
     2041 gatcagttgc tggctgccgg tcgctggttg ctggtactgc tggtggcgtg gctgctgtgg
     2101 cggaaagcgg tacgcccgca gttaacaagt cgcgccgagg cgatgaaagc tgtacagcaa
     2161 caggcgcagg cccgtgagga agtggaagat gcggtggaag tccgcctgag caaagacgaa
     2221 caactccaac aacgacgcgc taaccaacgt ctgggggcag aagtcatgag ccagcgtatc
     2281 cgtgaaatgt ctgataacga tccgcgcgtg gtggcgctgg tcattcgcca gtggataaat
     2341 aacgatcatg agtaacctga caggcaccga taaaagcgtc atcctgctga tgaccattgg
     2401 cgaagaccgg gcggcagagg tgttcaagca cctctcccag cgcgaagtgc aaaccctgag
     2461 cgctgcaatg gcgaacgtca cgcagatctc caacaagcag ctaaccgatg tactggcgga
     2521 gtttgagcaa gaagctgaac agtttgccgc actgaatatc aacgccaacg attatctgcg
     2581 ttcggtattg gtcaaagctc tgggtgagga acgtgccgcc agcctgctgg aagatattct
     2641 cgaaactcgc gataccgcca gcggtattga aacgctcaac tttatggagc cgcagagtgc
     2701 cgccgatctg attcgcgatg agcatccgca aattatcgcc accattctgg tgcatctgaa
     2761 gcgcgcccag gccgccgata ttctggcgtt gttcgatgaa cgtctgcgcc acgacgtgat
     2821 gttgcgtgtc gccacctttg gcggcgtgca gccagccgcg ctggcggaac tgaccgaagt
     2881 actgaatggc ttgctcgacg gtcagaatct caagcgcagc aaaatgggcg gcgtgagaac
     2941 ggcagccgaa attatcaacc tgatgaaaac tcagcaggaa gaagccgtta ttaccgccgt
     3001 gcgcgaattc gacggcgagc tggcgcaaaa aattatcgac gagatgttcc tgttcgaaaa
     3061 tctggtggat gtcgacgatc gcagcattca gcgtctgttg caggaagtgg attccgaatc
     3121 gctgttgatc gcgctgaaag gggccgagca gccactgcgc gagaaattcc tgcgcaatat
     3181 gtcgcagcgt gccgccgata ttctgcgcga cgatctcgcc aaccgtggtc cggtgcgtct
     3241 gtcgcaggtg gaaaacgaac agaaagcgat tctgctgatt gtgcgccgcc ttgccgaaac
     3301 tggcgagatg gtaattggca gcggcgagga tacctatgtc tgataatctg ccgtggaaaa
     3361 cctggacgcc ggacgatctc gcgccaccac aggcagagtt tgtgcccatg gtcgagccgg
     3421 aagaaaccat cattgaagat ggccgacccc agccttgagc agcaactggc gcaactgcaa
     3481 atgcaggccc atgagcaagg ttatcaggcg gggattgccg aaggtcgcca gcaaggtcat
     3541 gagcagggct atcaggaagg actggcccag gggctggagc aaggtctggc aaaggcgaag
     3601 tctcaacaag cgccaattca tgcccggatg cagcaactgg tcagcgaatt tcaaactacc
     3661 cttgatgcgc ttgatagt
//
LOCUS       DADKRT010000268         3587 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.273, whole genome shotgun sequence.
ACCESSION   DADKRT010000268 DADKRT010000000
VERSION     DADKRT010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3587
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.273"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(623..2332)
                     /locus_tag="JQ356_004069"
     CDS             complement(623..2332)
                     /locus_tag="JQ356_004069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858142.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY4623981.1"
                     /translation="MPLNKTFSSSIFSTKNSLSTDMSVNRDNRTITSSIMRVSNSSEL
                     IQFKNKTAPYFSEKRNVKVNINGVAKDIYGRQIVCRHLASYWEMNFMETNGKVNYQLL
                     STPDAIAKNVCLEKTEDFSKSPAYIYFVENKKWGTVITNFFYNMKKNGDFVRTLSACT
                     LNHQMALGLKIKRVQESEKWVVQFFDPNRTVTHKRTVFTCDSHFELSQLSAKDFFDDF
                     YWKIYGLEQPGQVIFEDRHNSPLTNTVKLLPDELINSRVIYHAITKNLTEVLFILMEK
                     YKNGEISQSKLVNLLATRSSDGTPAFYIALQNGCSDIIQVYGKILNMCNLSQETILTL
                     LAAVGANNVPGLCMSFMNGHVDTIKAYGEIVFKTPLTSDKRLYLLAAKDSHDLPGLFF
                     ALQNGHADSIRMFGSLLNKKMLSSEQIKELLKVKHGLFMALQNGHTKAIMAYGDILKI
                     LPPHQEYIDELLWIKNPNGTSGLFMAFYNGHTETIRAFCNILKNYSFTTRRLVEMLSA
                     TNKDGIPGVFVSVVNRDKETILEYCRIIKENNLEPDTIAEQFSKKMKKTFIEIINRFN
                     HFL"
     gene            complement(2764..3483)
                     /locus_tag="JQ356_004070"
     CDS             complement(2764..3483)
                     /locus_tag="JQ356_004070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector
                     phosphothreonine lyase"
                     /protein_id="HAY4623982.1"
                     /translation="MPIKKPCLKLNLDSLNVVRSEIPQMLSANERLKNNFNILYNQIR
                     QYPAYYFKVASNVPTYSDICQFFSVMYQGFQIVNHSGDVFIHACRENPQSKGDFVGDK
                     FHISIAREQVPLAFQILSGLLFSEDSPIDKWKITDMNRVSQQSRVGIGAQFTLYVKSD
                     QECSQYSALLLHKIRQFIMCLESNLLRSKIAPGEYPASDVRPEDWKYVSYRNELRSDR
                     DGSERQEQMLREEPFYRLMIE"
BASE COUNT         1066 a          720 c          639 g         1162 t
ORIGIN      
        1 aagcttgata caactggtct ggtatataca gtttctttga gtgcggttac gtccacagag
       61 gtaacggtaa aagtaacccc ttgtcgggac cactccgacc gcgcacagag gcattttcat
      121 cgctgacagg ccgcattgcc tcgcagggct ggaggaggat cggtgatatc cggacgaccg
      181 taccggctta cgccgggctt cggcggtttt actcctctgc catgtgcaac aacggagtgc
      241 cgccttacat gccgctggcg cggcatatcc tggtaacatt tttgttgata ccaccttccg
      301 gccttatcct gaccagtggg ctttcctggc atcgatgata ccgatgaacg cgcatgatat
      361 tgagccgacg atattacggg caactggaaa tactcaccct ctggatgtga cctttatcca
      421 tgaagaagat ttggccatac catggaaacc tgaacaatca tcagtttacg cccatgtaaa
      481 cccctacggg atatttgaac tcgatatgga aacaaggttg ccaatcgagg tggttgcctg
      541 aaagttggca gttacccggt cactacacct tgttggagtg aacatatcaa aaacaggtag
      601 ttacacaatt taaattacag tctcataaaa aatgattaaa tctatttatt atttcaataa
      661 acgttttttt catcttcttt gaaaattgtt ctgctatagt atccggttcc agattgttct
      721 cttttattat tctacaatac tctaatattg tttctttgtc tctatttact acagatacaa
      781 atacaccagg aataccatct ttattagttg cggacagcat ttcgaccaat cgtcttgtgg
      841 taaaactata gttttttaga atattacaaa aggcacgtat tgtttcggta tggccattat
      901 aaaatgccat aaaaagtcct gatgtaccgt tgggattttt tatccataat aattcatcta
      961 tatattcctg gtgagggggg agtattttta gtatatctcc atacgccata atggcctttg
     1021 tgtgcccatt ttgaagtgcc ataaacaacc catgctttac tttcaataat tctttaattt
     1081 gttcactact aagcattttc ttattaagca gacttccgaa catacgaata ctatctgcat
     1141 gtccattctg caatgcaaaa aataacccag gtaaatcatg gctgtctttc gcagctaata
     1201 gatataatct cttatcggaa gttaacgggg ttttaaagac tatttcccca taggctttta
     1261 ttgtgtctac atgtccgttc ataaaagaca tgcataaacc cggcacattg tttgccccta
     1321 ccgcagcaag caatgtaagt attgtttctt gactaagatt gcacatattt aatatcttac
     1381 catatacttg aataatgtct gaacatccgt tttgaagtgc tatataaaat gcaggagtac
     1441 catcagagct tctcgtggcc agaaggttca ccagtttaga ttgagaaatt tcaccatttt
     1501 tgtatttttc catcagtata aataatactt ctgtcagatt ctttgttatc gcatgatata
     1561 taactctgga attgatcaat tcatctggta aaagtttcac tgtgtttgtt agaggggaat
     1621 tatgcctatc ttcaaatatt acctgcccgg gttgctccag accataaatt ttccaataaa
     1681 aatcatcaaa aaaatcctta gcggataatt gactcagttc gaaatggcta tcacaagtaa
     1741 atacagtacg tttatgagta acagttcgat taggatcgaa aaactgaaca acccattttt
     1801 cactttcttg tacgcgcttt attttcaacc ctaacgccat ttggtggttt aatgtgcatg
     1861 ctgataatgt tctgacaaag tctccatttt ttttcatgtt ataaaaaaaa ttagtaataa
     1921 ctgttcccca ctttttattt tccacaaaat aaatataagc tggtgatttt gaaaaatctt
     1981 ccgttttttc caaacataca ttttttgcaa tagcatcagg ggtgctaaga agctgatagt
     2041 ttaccttccc atttgtttcc ataaaattca tttcccaata ggaagctagg tgacggcaaa
     2101 ctatttgtct tccatatata tcttttgcca ctccatttat atttaccttc acatttctct
     2161 tttctgaaaa ataaggtgct gttttattct taaactgaat tagttcactg gagtttgaga
     2221 ccctcataat agaacttgtt attgttctat tatctctgtt aacagacata tctgttgata
     2281 acgaattttt tgttgaaaat atactagatg aaaatgtttt atttaacggc atagaagaca
     2341 accatagaga tgttataata ctattagatt gcagttacta atagtaaaag cctccttaca
     2401 aggaggtagc ttattcagaa tgctcctata agatagcgag ctcgtcaacg atacagatga
     2461 tctgattata ttgtgcaaaa ggagaacagg aaaataggca ctggaaaaga tgaaggcctg
     2521 atgggagcat taactaatgc aaaatccgac aggttaatat cccgaaaagc aatcaaacga
     2581 ctcaaacagg agatgcacgc tgaagtggtg gacaactgtt cggatttcag atgagtagct
     2641 cagcagttta tgagccgaat gctctgtcac ggtcaggaat caggctgcat acgctgtgcc
     2701 aaatctaatc gtagttattc taaccagttt tccagctaca aggtggtgta gctggcatct
     2761 tctctactct atcatcaaac gataaaatgg ttcctctcgt aacatttgct cttgcctttc
     2821 acttccatct cgatcgcttc gtagttcatt acgatagctg acatatttcc agtcttcagg
     2881 tctaacatct gacgccggat actccccggg agcgattttg cttcttaata gattagactc
     2941 gagacacatt ataaattgtc gtattttatg aagtaataaa gcactatatt gcgagcattc
     3001 ctgatctgat tttacatata gcgtaaactg agctcctatc cccacacgag attgctgaga
     3061 aactcgattc atatcagtta tcttccattt atctatagga ctgtcctctg aaaataataa
     3121 accagacaaa atttggaatg ccagaggaac ttgctcccta gctatactaa tatgaaactt
     3181 gtccccaaca aaatccccct tactctgagg attttcacga catgcatgaa taaacacatc
     3241 tccactatgg ttcacaatct ggaatccttg gtacatgaca gaaaaaaatt gacatatatc
     3301 agagtaagtt ggcacgttcg atgctacttt gaaatagtac gctgggtatt gccgtatttg
     3361 gttgtacaat atattgaagt tatttttcaa tctttcattc gcagaaagca tctgcggtat
     3421 ttcagacctc acaacattca aagaatctaa atttagtttt agacagggct tttttatggg
     3481 catagaaaac gtcctctata aaatagatat attatcttat attgattgtt tatcatcttt
     3541 tataaaacga tacattatat gtaatgtatg taagcgtaag ggtcttc
//
LOCUS       DADKRT010000269         3529 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.274, whole genome shotgun sequence.
ACCESSION   DADKRT010000269 DADKRT010000000
VERSION     DADKRT010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.274"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(293..988)
                     /locus_tag="JQ356_004071"
     CDS             complement(293..988)
                     /locus_tag="JQ356_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HAY4623983.1"
                     /translation="MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQ
                     QRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISER
                     LQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLP
                     ESSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVH
                     GPVKAVYLIIEDC"
     gene            complement(981..2408)
                     /locus_tag="JQ356_004072"
     CDS             complement(981..2408)
                     /locus_tag="JQ356_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HAY4623984.1"
                     /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE
                     LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVWFAKNKEDATRYILQVAQ
                     RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK
                     DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL
                     VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG
                     PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG
                     SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEK
                     GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR
                     DLPEADGESFRSWFKKHQAQEKKNG"
     gene            complement(2419..3138)
                     /locus_tag="JQ356_004073"
     CDS             complement(2419..3138)
                     /locus_tag="JQ356_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HAY4623985.1"
                     /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ
                     PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAE
                     KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL
                     ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVGHLMEVRPEYLIGADVSCLLNISG
                     RLQREGQKVKVMHIAEVLMSR"
BASE COUNT          896 a          968 c          740 g          925 t
ORIGIN      
        1 gccttgtcaa aaaaatggta gatgaatacc aacaaaactc tgggcagtaa taaacaacat
       61 tctgatagag agtgcctgta taaagctgaa gtgacaatga ccgggaaggg aacccgtttt
      121 caggaatgga tgcctgtctt tttcactgta aatatcctgg cattactaat gccaggatat
      181 ttacagaaga gcagcataac catgacggaa cggggttaag tcaggttgtc cttaacgcta
      241 ttttcaacct cgtatgcctt cttcaggttt atgttcagat ctcatatctc tctcagcaat
      301 cctcaataat cagatacacc gctttcaccg ggccatgaac cccgacgact ttgataagct
      361 caatatccgc cgttgaacta gggccgctaa tgatgttaat gcaggacggc attcgttcac
      421 cggcctgcgc tttctgatgc aatttttctg cgagttgcgc tacacgcggc aggattgtgc
      481 ttttacgcag gataaaaaga gaagattccg ggagcaggct caatgaacgc ccgcgctcgg
      541 cggcggaaaa aagaaccacg cctcccgatt cggttaaacc atattcagca tacacaacac
      601 ccactttagc ctgctctgcc tgcgagatat tctcggcacc tttcgccgga tcccaaacaa
      661 cggcattgca ttcctgctgc aaacgttcac taatccccaa ttcctccagc ctcgtgtcac
      721 cgctaatcac gaccgactga tctcccagct ctttacacag acgtattgca gcttctgccg
      781 ccttcgcctc gctggtcagc tcacagcgcg tcaacataac atcgctggca aactgaataa
      841 acgcgtcaca gcgctgctgt tggttaagtt gggtaagccg ctcgttagca tagttgttaa
      901 gcggcgcatc ttctgcttgc ggttcaagtc gcagcgggcg acccagtgcc tgagcaacgt
      961 tattcaaaaa ttcgcctcga ttatccattc tttttctcct gcgcctgatg tttcttaaac
     1021 caactacgga aactctctcc gtcagcttca ggaagatcgc gtgcttccat ccagtcgcta
     1081 atcgcgccaa atttgagtgg tgttttgccg ccattgataa accagcttgc cgcatgagcg
     1141 ccggccatca tcccgacttt ccacaatcct ggatgactat tggcataagc gaacattttt
     1201 atcgcccgtt gctctgcttt tgcggtgatc cctttttcag ccatcacccg acgatgacgc
     1261 aaaatcagtt ttgacagcgg aatacgcacc ggacacacgc tgtcacaagc agtgcataaa
     1321 gagcaggcgt agggtaaatc tttaaaatct ttatagccgc caagtagcgg agaaatcacc
     1381 gcaccaattg gccctggata aatagagcca tatccatgac cgccaatatg gcgatatgcc
     1441 ggacaagtat tcatacaagc cccgcagcga atacagcgca gcacatcccg aaattcagag
     1501 gccagcacct cagaacgccc gttatcgaca ataaccagat gaaactcttc aggaccatca
     1561 acgtgccccg cttcgcgcgg tcctgtcagc caggtgttgt atcccgtcaa acgtgcacca
     1621 acggcactgc gcgccagcat ggtgatcaat acatctacct cggcaaacgt gggggcaata
     1681 cgctccattc ccatcactgc aatatgcgtt ttaggcagcg tggtacacat tcgcgcatta
     1741 ccttcattgg tcaccaggca taccgaacct gtctctgcca ccgcgaaatt acagccggta
     1801 atacctattt cagcactgag gaaatcttcg cggatttttt gccggatgaa taaggtcatc
     1861 gcttcaggcg tttccggccc ctcatagccc agacgttcgt gtagcactcg acggatctga
     1921 tggcgatctt tatgaattgc cgggaccaca acatgagatg gcggatcttg atccagctgg
     1981 agaatatatt cacccagatc ggtttcaatc acctgaatgc cagcatcctg caacacatga
     2041 ttgacaccaa tctcttcggt caccatcgat ttagatttca ccaccttccg ggcatttttg
     2101 cgttgggcaa cctgtaaaat gtagcgggta gcgtcttctt tgttttttgc aaaccagacg
     2161 tgaccgccgt tttgcgtcac tttttctgag agctggtaca gataagcgtc gagattactc
     2221 agaacatgat cacgtatctg ggcggcccga tcgcgccact cctcccagtg ccccaattca
     2281 tcgaccattt tttgccgatt tgccccaata cgctgctgcg cgtttgccac cgctttgcgc
     2341 atgatcggat cttcaatttg ctgacggatg cgagtcttaa aatctgtatt actggttttg
     2401 atcgacatct ttatatcctc agcggctcat caacacttca gcaatatgca tcactttgac
     2461 tttctgccct tcccgttgta atcgcccact gatgttcagc aggcaactca cgtcagcacc
     2521 aattaaatac tcagggcgga cttccatcag gtgcccaacc ttttctttca ccatctcgcc
     2581 ggatatttcg gccattttga ccgagaacgt gccgccaaat ccgcagcagg tatcctgttc
     2641 agcaaaggtc aacagctcca gtccacgcac atttttcagc agcgtaagtg gctcgtcctt
     2701 cactcccagc ttacgggcca ggctacaaga tgggtgatac acagctctcc cttgcaaact
     2761 ggcacctaca tcgactaccc ctaatttatt aacaataaaa gaggtgagat cctgcatacg
     2821 cgcggcaacc ttttcggcac gtgatgccca ttcaggttca tccgccagat acgtcgggta
     2881 actttttacg gcataggtgc aagagccagc cggtgaaata atgggatcgt cgttatcctc
     2941 cagtgcggcg atcagatttt tcatccctgg aatcgcttct ttgatataac cgctattgat
     3001 cgcaggctga ccgcagcatc cctgtttctc cgggaaattt acgcgacagc cgagtttttc
     3061 cagtagcagc acggagtctc gtgccattct tgatttcagg gcgtcaccaa tacaggtgac
     3121 aaagaaattg acattcacaa ctaatactcc attacttcat gcccatttat gcccgatgtt
     3181 tcccccccac cgggggatca atcatcaata aatatggcgt tcttttttaa ttggctagca
     3241 acatactacc cctcatttgt atgacaaatg ataatctttc acccaaacgt caaatgcaat
     3301 aactaatttt atttctttcg gcatcgctca cattttatgg agaaatcgac gatcattttt
     3361 ggcataagaa atccatttaa aaatggccac atcccttata cctattcaga gctacttatt
     3421 caggggttat tgagatatac actgatggtg tacaaacaaa atcaccgaca ataatcacgt
     3481 atcaagtaat agtcgggatt ttatttaatt gaagcaattt agtttgtat
//
LOCUS       DADKRT010000270         3487 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.275, whole genome shotgun sequence.
ACCESSION   DADKRT010000270 DADKRT010000000
VERSION     DADKRT010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.275"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..243
                     /locus_tag="JQ356_004074"
     CDS             <1..243
                     /locus_tag="JQ356_004074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4623986.1"
                     /translation="ELKNNGIKAVIPRKSNEKMASDGRAQLDRDAYCNRNVVERCFGR
                     LKEYRRIATRYDKTARNYLAMVKLGCIRLFYQRLRN"
     gene            358..1389
                     /locus_tag="JQ356_004075"
     CDS             358..1389
                     /locus_tag="JQ356_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY4623987.1"
                     /translation="MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
                     DVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGD
                     FGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEK
                     MAAIHKALDECSAEHPVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGA
                     LHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLK
                     ENPKFRGIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFP
                     GGKHGLAKV"
     gene            complement(1409..1660)
                     /locus_tag="JQ356_004076"
     CDS             complement(1409..1660)
                     /locus_tag="JQ356_004076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001119656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623988.1"
                     /translation="MPGTTTAMSINFIGITARTMNSNGSHGKPQIPVDYQKLLSIEDI
                     TFCRNRWGNIGENALRRVAVGKKLSFFGSDRGGENAAII"
     gene            1583..2273
                     /locus_tag="JQ356_004077"
                     /pseudo
     CDS             1583..2273
                     /locus_tag="JQ356_004077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(2290..2469)
                     /locus_tag="JQ356_004078"
                     /pseudo
     CDS             complement(2290..2469)
                     /locus_tag="JQ356_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2799..>3487
                     /gene="ipaH7.8"
                     /locus_tag="JQ356_004079"
     CDS             2799..>3487
                     /gene="ipaH7.8"
                     /locus_tag="JQ356_004079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH7.8"
                     /protein_id="HAY4623989.1"
                     /translation="MFSVNNTHSSVSCSPSINSNSTSNEHYLRILTEWEKNSSPGEER
                     GIAFNRLSQCFQNQEAVLNLSDLNLTSLPELPKHISALIVENNKLTSLPKLPAFLKEL
                     NADNNRLSVIPELPESLTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLK
                     FLHVYYNRLTTLPDLPDKLEILCAQRNNLVTFPQFSDRNNIRQKEYYFHFNQITTLPE
                     SFSQLDSSYRI"
BASE COUNT         1009 a          815 c          758 g          905 t
ORIGIN      
        1 gagctgaaaa ataacggtat aaaggcagta atcccccgaa agtcaaatga gaaaatggca
       61 tcggatggac gtgcacagct tgatcgtgat gcgtactgca atcgtaatgt cgttgaacgg
      121 tgctttgggc ggctgaaaga atatcgccgc atcgccacgc gttacgacaa aacggcgaga
      181 aattacctgg cgatggtgaa actgggctgc atccgactct tttatcaacg cttacgtaat
      241 taagggacac agcctaaata gctgcgcgga atagtagatc cctttgaggg aacttagccc
      301 ggattgtgcg atctgatcaa tcgccaaatc aaaacaaatc accaaccgga ctgagcaatg
      361 ccgatcatag caccaatttc ccgtgacgaa cgacgcctga tgcagaaagc catccataaa
      421 acacacgata aaaattatgc ccgcagactg actgccatgc tgatgctgca ccggggcgac
      481 cgtgtcagcg acgttgccag aacgctctgc tgcgcccgtt cctctgttgg acgctggatt
      541 aactggttca cgcagtcggg tgttgaggga ctgaaatcat tacctgccgg gcgtgcccgt
      601 cgctggccgt ttgagcatat ctgcacactg ttacgtgagc tggtaaaaca ttctcccggc
      661 gactttggct accagcgttc acgctggagt acagaactgc tggcaataaa aatcaatgag
      721 ataaccggtt gccagttaaa tgccggaacc gttcgccgct ggttgccgtc tgcggggatt
      781 gtgtggcgaa gggctgcgcc aactctgcgt atccgtgacc cgcataaaga tgaaaagatg
      841 gcagcaatcc ataaagcact ggacgaatgc agcgcagagc atccggtctt ttatgaagat
      901 gaagtggata tccatcttca tcccaaaatc ggtgcggact ggcaactgcg cggacagcaa
      961 aaacgggtgg tcacgccggg acagaatgaa aaatattatc tggccggagc gctgcacagc
     1021 gggacaggta aagtcagcta tgtgggcggc aacagcaaaa gttcggcgct gttcatcagc
     1081 ctgctgaagc ggcttaaagc gacataccgt cgggcgaaaa ccatcacgct gatcgtggac
     1141 aactacatta tccacaaaag ccgggaaaca cagagctggc tgaaggagaa cccgaagttc
     1201 aggggcattt atcagccggt ttactcgcca tgggtgaatc atgttgaacg gctatggcag
     1261 gcacttcacg acacaataac gcgtaatcat cagtgccgct caatgtggca actgttgaaa
     1321 aaagttcgcc attttatgga aaccgtcagc ccattccccg gaggcaaaca tgggctggca
     1381 aaagtgtagc ggtattaagc gcagctattt agattattgc cgcattttct ccaccacgat
     1441 cagagccgaa aaaagataat ttttttccaa ctgccacccg gcgtaatgcg ttttcaccaa
     1501 tgttacccca cctattgcgg caaaaggtaa tgtcttcaat cgatagaagt ttctggtaat
     1561 ctactggtat ttgaggtttt ccatgactac cgttactgtt cattgtccgc gctgtaattc
     1621 cgatgaagtt tatcgacatg gccgtagttg ttcccggcat gagcgtttcc gttgtcgctc
     1681 atgtaaacgt gttttccagc tcacttactc ttatgaagcc agaaaactcg gcgttaagga
     1741 gcagatcgtt gaaatggcac ataacggcgc agggggctgt tataccgcca gaacactgaa
     1801 aatcggcatc aataccgtca tacggacatt aaaaagctct cgccccggcg gataacatct
     1861 gcgccagtcg ctcacgctga tgttgccctt atctgtgaac ttgatgagca gtggcgcttc
     1921 gttggcagca aggcgcaaca acactggccc tggtatgcgt acaacactaa aactggcggt
     1981 gtgttggctt acacttgcgg gccacggaat gatgagacct gtcgggaact gttagccctg
     2041 ttgactccgt tctgtatcgg catggtgacc agcgatgact ggggcagcta cgccagagaa
     2101 gtgccggagg agaaacacct gaccggcaaa atcttcacgc aacgtatgaa cgtaacaacc
     2161 tgaccctccg cccccgcatc aagcggctgg cacgtaaaac aatctgcttc tcgcgttccg
     2221 tggaaatcca cgaaaaagtc atcggttcct tcattgaaaa gcacatattc taatgattgg
     2281 aagtactacc cggcaaaact cattcagtgc attccagtga ttcaggatat agttgaacgc
     2341 ctttaccatt tcagcatggt ttgacaaagt tttcctctgg agctttatcc agtcatacaa
     2401 ggacttcatt cgcggcacac atttctcctg ccttaccgca agccgttttt ctgccggcct
     2461 ccctcatatt aaatgtgtat cgttttttta cagtaatttt aatttatcat tctataatag
     2521 gaataaatga gcttggctaa aatatgatgt aaaacaaata tacttactcg gattacattt
     2581 ccttgctcac tggaatgttg aattcagtgt tattattgac tgcagtcaca ataaaaaaaa
     2641 gaattccata gaaaacctca acaaataaat tacaactaac ttctgttatg tgtaaaatgg
     2701 aaactattaa aacttaatat cgaaaatggt aagtgaaatt tgtataaata tacaatttta
     2761 aatatttatt ctcacaaata taaggttgcc ctagcattat gttctctgta aataatacac
     2821 actcatcagt ttcttgctcc ccctctatta actcaaactc aaccagtaat gaacattatc
     2881 tgagaatcct gactgaatgg gaaaagaact cttctcccgg ggaagagcga ggcattgctt
     2941 ttaacagact ctcccagtgc tttcagaatc aagaagcagt attaaattta tcagacctaa
     3001 atttgacgtc tcttcccgaa ttaccaaagc atatttctgc tttgattgta gaaaataata
     3061 aattaacatc attgccaaag ctgcctgcat ttctcaaaga acttaatgct gataataaca
     3121 ggctttctgt gataccagaa cttcctgagt cattaacaac tttaagtgtt cgttctaatc
     3181 aactggaaaa ccttcctgtt ttgccaaacc atttaacatc attatttgtt gaaaataaca
     3241 ggctatataa tttaccggct cttcccgaaa aattgaaatt tttacatgtt tattataaca
     3301 ggctgacaac attacccgac ttaccggata aactggaaat tctctgtgct cagcgcaata
     3361 atctggttac ttttcctcaa ttttctgata gaaacaatat cagacaaaag gaatattatt
     3421 ttcattttaa tcagataacc actcttccgg agagtttttc acaattagat tcaagttaca
     3481 ggattaa
//
LOCUS       DADKRT010000271         3483 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.276, whole genome shotgun sequence.
ACCESSION   DADKRT010000271 DADKRT010000000
VERSION     DADKRT010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3483
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.276"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..1944
                     /locus_tag="JQ356_004080"
                     /pseudo
     CDS             1..1944
                     /locus_tag="JQ356_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
     gene            complement(1987..2460)
                     /gene="ivy"
                     /locus_tag="JQ356_004081"
     CDS             complement(1987..2460)
                     /gene="ivy"
                     /locus_tag="JQ356_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-lysozyme inhibitor"
                     /protein_id="HAY4623990.1"
                     /translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK
                     AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK
                     SNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
     gene            2614..3384
                     /gene="yafV"
                     /locus_tag="JQ356_004082"
     CDS             2614..3384
                     /gene="yafV"
                     /locus_tag="JQ356_004082"
                     /EC_number="3.5.1.111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutaramate amidase"
                     /protein_id="HAY4623991.1"
                     /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF
                     TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
                     HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAI
                     YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
                     TADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR"
BASE COUNT          777 a          892 c          999 g          815 t
ORIGIN      
        1 attatcaaaa aagagtacgg ctgactggag ttctcagctt atgcccagtc tcgcgtgctg
       61 caaaaactct ccggcgtgag cgggatcctg gcgattaccg tcggcgtgcc gaactcatta
      121 ggcccgggcg agctgctgca acattacggc actgacgagc agaaagatca ctatctgccg
      181 cgtctggcgc gtggtcagga gatcccttgc tttgcactga caagcccgga agcgggttcc
      241 gatgcgggcg cgattccgga caccgggatt gtctgcatgg gcgaatggca gggccagcag
      301 gtgctgggga tgcgtctgac ttggaacaaa cgctatatta cgctggcacc gattgcgact
      361 gtgcttgggc tggcgtttaa actctccgac ccggaaaagc tgctgggtgg cgcagaagat
      421 ttaggtatta cctgtgcgct gatcccgacc accacgccgg gcgtggaaat tggtcgtcgc
      481 cacttcccgc tgaacgtacc gttccagaac ggaccgacgc gcggtaaaga tgtcttcgta
      541 ccgatcgatt acatcatcgg tgggccgaaa atggccgggc aaggctggcg gatgctggtg
      601 gagtgcctct cggtaggccg cggcatcacc ctgccttcca actcaaccgg cggcgtgaaa
      661 tcggtagcgc tggcaacggg cgcgtatgct cacattcgcc gtcagttcaa aatctctatc
      721 ggaaagatgg aagggattga agagccgctg gcgcgtattg ccggtaatgc ctacgtgatg
      781 gatgctgcgg catcgctgat tacctacggc attatgctcg gcgaaaaacc tgccgtgctg
      841 ttggctatcg ttaagtatca ctgtacccac cgcgggcagc agtcgattat tgatgcgatg
      901 gatatcactg gtggcaaagg cattatgctc gggcaaagca acttcctggc gcgtgcttac
      961 cagggcgcac cgattgccat caccgttgaa ggggctaaca ttctgacccg cagcatgatg
     1021 atcttcggac aaggagcgat tcgttgccat ccgtacgtgc tggaagagat ggaagcggcg
     1081 aagaacaatg acgtcaacgc gttcgataaa ctgttgttca aacatatcgg tcacgtcggt
     1141 agcaacaaag ttcgcagctt ctggctgggc ctgacgcgcg gtttaaccag cagcacgcca
     1201 accggcgatg ccactaaacg ctactatcag cacctgaacc gcctgagcgc caacctcgcc
     1261 ctgctttctg atgtctcgat ggcagtgctg ggcggcagcc tgaaacgtcg cgagcgcatc
     1321 tcggcccgtc tgggggatat tttaagccag ctctacctcg cctctgccgt gctgaagcgt
     1381 tatgacgacg aaggccgtaa tgaagccgac ctgccgctgg tgcactgggg cgtacaagat
     1441 gcgctgtatc aggctgaaca ggcgatggat gatttactgc aaaacttccc gaaccgcgtg
     1501 gttgccgggc tgctgaatgt ggtgatcttc ccgaccggac gtcattatct ggcaccttct
     1561 gacaagctgg atcataaagt ggcgaagatt ttacaagtgc cgaacgccac ccgttcccgc
     1621 attggtcgcg gtcagtacct gacgccgagc gagcataatc cggttggctt gctggaagag
     1681 gcgctggtgg atgtgattgc cgccgaccca attcatcagc ggatctgtaa agagctgggt
     1741 aaaaacctgc cgtttacccg tctggatgaa ctggcgcaca acgcgctggc gaagggcctg
     1801 attgataaag atgaagccgc tattctggtg aaagctgaag aaagccgtct gcgcagtatt
     1861 aacgttgatg actttgatcc ggaagagctg gcgacgaagc cggtaaagtt gccggagaaa
     1921 gtgcggaaag ttgaagccgc gtaattgaat aacggagccg aaaggctccg tttctttatc
     1981 cgctaattat ttaaaattaa agccatccgg atggttttcc aggctgccgg tcaacgccgc
     2041 gaacagcacc gttttaccat caatcgaaag cgcatcgttc acattcagcc aggtgagttt
     2101 ctcttgcgac gttttctcat caatagtcga gaacagcccc gtcatctgat tagatttctc
     2161 ggaccacatc acagcgatac gttgcgagcc acagtcatgc ggtttgcacg cgctcatcac
     2221 ctgatacgtc tcatctccca acgttacggt ttgtgcggga gtataagtac cgcctttcat
     2281 cacccaggca ggcagcttat gcccttgtac catctgatta aatgcagctt tggtggtttc
     2341 gccctttgca aggctgctaa tggttaaatc atcctgcgcc attgcactgg tggcgatgac
     2401 cagagcggcg actgtcgtta ttgccttaaa catcattcct cccgagctta tcctgcccat
     2461 gttattaacc ttctaaagcc tggcgataac acgataattt gcaaatcaga tatttccaat
     2521 atcagcattt gttatcaatt tattctgcgc taaggcaact gcctgataag gtgttaaagt
     2581 tataaaaccc ttcgcataaa ggagttgtac accgtgcctg gtttgaagat tacgcttttg
     2641 cagcaaccac tggtgtggat ggatggccct gccaacctgc gtcattttga tcgtcaactg
     2701 gaaggtatta ccgggcgcga tgtgatcgtt ctaccggaga tgtttaccag cggctttgcc
     2761 atggaagcgg cagcttcgtc gctagcacaa gatgacgtag tgaactggat gacagctaag
     2821 gcgcagcagt gcaatgcgct gatagcaggc agtgttgcat tacaaacgga gtctggttcg
     2881 gttaaccgct ttttgctggt tgagccgggc ggcacggtac atttttatga taagcgtcat
     2941 ctgttccgca tggcagatga gcatctacat tataaagcgg gcaatgcgcg agtgattgtg
     3001 gaatggcgcg gctggcgtat tttgccgttg gtgtgctacg acttacgttt tccggtgtgg
     3061 tcgcgcaatc tcaacgatta tgacctcgcc atctacgttg ccaactggcc tgctccgcgc
     3121 tctctgcact ggcaggcatt gctgacggcc cgcgcgattg agaatcaggc gtatgtggcg
     3181 ggatgcaatc gcgtcggcag cgatggcaac ggctgccatt atcgcggtga cagccgggtg
     3241 attaatccac aaggcgagat tatcgctact gccgacgcgc atcaggcaac gcgcattgat
     3301 gcggagctgt cgatgatggc attgcgggaa tatagagaaa agtttccggc atggcaggat
     3361 gcggatgagt ttaggttgcg gtgagtgggg gttgtgttta aggctggggg agagtcgggg
     3421 taagactacg aaagcccgct ctccgcaagg actgacgcca gatagtttct gtccatagct
     3481 gct
//
LOCUS       DADKRT010000272         3410 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.277, whole genome shotgun sequence.
ACCESSION   DADKRT010000272 DADKRT010000000
VERSION     DADKRT010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.277"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(20..322)
                     /locus_tag="JQ356_004083"
     CDS             complement(20..322)
                     /locus_tag="JQ356_004083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000890114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623992.1"
                     /translation="MLEIVLSPVKAQQFTVTLDAQVCTIRLNQRTTGMYIDIIVNGEP
                     CLYGVLCLNNNRIVRYGYLPFQGDLFFTDTEGNSDPDWRGLGSRYRLYWLLPEELI"
     gene            complement(322..1032)
                     /locus_tag="JQ356_004084"
     CDS             complement(322..1032)
                     /locus_tag="JQ356_004084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000010340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623993.1"
                     /translation="MSFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIY
                     YARNDPAGAHQKGGKPFSPDSFVVVEVGAEASVSTVPVEQGAYTTFNKIQRSPELHVT
                     FIVEGWTAFSGSVPNLTNFSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKY
                     DYRMRSNNGPTLLTVTAVFQTVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTAS
                     VTQPSDADRRSATNRGIT"
     gene            complement(1029..3050)
                     /locus_tag="JQ356_004085"
     CDS             complement(1029..3050)
                     /locus_tag="JQ356_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HAY4623994.1"
                     /translation="MAQVLDELVLSLGIDDRDFTAGEQAVHAALNRLTTVMEGVADTF
                     SQGQKKTSESLEKTGKDADKTARRMEDAGKRASRFFSGIRSEILALAGVSLTLGGLKN
                     LVTGFARDLNRLSVESDAFGMKARNLDGWLRAARANNVDEGEMSGAFSRLANAKAAFR
                     AGRSFDPVLQDLFQVAARAGISVDLNTDSTEAIMRKLAVIFPRLTKSEQTAYGNALGF
                     SYAGQQFLGSGHALKDVDEFTSRSQVTPGRTALARKLRKELVELDQTWSGIGMTISTA
                     LMPYALKLSHWLETLGDWMQQHPEEVNRFITTFLNDVESVASLANKAAGELGGWQNVI
                     ITLIGLKVASWVRGLTKALSGPGGLLFAITALYPVVDGLLTSIVGRENKDWLDSHGFF
                     WASDGTFFFNKKEMETYQTKLDAGEKPGNITRAQSPTVWQQGMLDTQASQATGREAAF
                     GESWLQGMRATQEKLGNAMQNRQRPTKTGEALLGWLQPKLSQLEEKYNLPPGLLRSVA
                     ITESRGNQFAVSPAGAMGLFQFMPKTASEFGLRGNDAFDPEKAADAAARKLGGLIRFF
                     HGDLAKALAAYNWGEGNVQRKGLAAAPEETRNYIPRVLANLPYPGAAMAIRSLHPAPV
                     SQSTVTETTHIGTLNVTTTSDNVKGITDDARRRITNSALVSVYSSGVTG"
     gene            complement(3034..3216)
                     /locus_tag="JQ356_004086"
     CDS             complement(3034..3216)
                     /locus_tag="JQ356_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000228829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HAY4623995.1"
                     /translation="MVDYVNVPRTIATVISSGKASKAELDSVLGVQDLWDLLEIIHVD
                     AHNEQVIQENRNGAGT"
BASE COUNT          797 a          992 c          816 g          805 t
ORIGIN      
        1 attttacgtt gtctgtagct catatcagtt cctcaggtaa cagccagtag agccggtacc
       61 gggatccgag cccccgccag tcagggtcac tattcccctc cgtgtcggta aaaaacaggt
      121 ccccctgaaa cggcaggtat ccgtaccgga caatccggtt attattcaga cacagcacgc
      181 catacaggca cggttcacca ttaacaatga tatcgatata catccccgta gtacgctgat
      241 tcaggcgaat ggtgcagacc tgagcgtcca gtgtcaccgt aaactgctgg gctttaacgg
      301 gagataaaac aatttccagc atcaggtgat ccccctgttc gtggcacttc gtctgtcagc
      361 gtctgacggt tgtgtcaccg acgccgtaac tggctgcgtt ttaaccgatg cggccccttt
      421 tgctttatcg ttgtccgtgg gagacgactt atccgtactt cccactgaca cctctcctgt
      481 attcattacg gtctgaaata ccgcagtaac cgtcagtaag gtcggaccat tattacttcg
      541 cattcggtag tcatatttca caaggtcgca ggatgtccat gtcttgtccg gcgtctcaat
      601 atcgtagagt cctgccgtgg tacgcatccg ttcaagcgtt tccagcacat tcgtccgcga
      661 ggtggtggaa aaatttgtca ggttcgggac ggatccggaa aaggccgtcc acccctctac
      721 aatgaaagtc acatgcagtt ccggcgatct ctggatttta ttaaaggtgg tataagcccc
      781 ctgctccacg gggacggtgg aaacagaagc ctccgcgccc acctcaacga caacaaaaga
      841 atccggggag aaaggtttgc cacccttctg atgggcacct gccggatcat tccgtgcgta
      901 ataaataccg aatgacggtg ccagtacact attaatgagt cccaggacac cgccgccacg
      961 aactgcactc agtacgttac tttcactgag cgaaaagtta ttcagggaaa tattatcgaa
     1021 agaaaaactc atcctgttac cccgctggaa taaaccgaca caagcgccga attcgtgata
     1081 cgccgacgtg cgtcatcggt aatacccttc acattgtccg acgttgtggt gacattcagt
     1141 gtcccgatat gcgtggtttc cgttacggtg gactgcgata caggcgcagg atggagcgac
     1201 cgtatggcca ttgccgcacc cggataaggc aggttcgcca gcacccgcgg aatatagttg
     1261 cgggtctcct ccggagcagc agccagtccc ttacgctgaa catttccctc tccccagtta
     1321 tatgccgcca gagccttagc cagatcgcca tgaaaaaaac gtatcaggcc accaagtttt
     1381 ctcgcggcgg catcagcggc tttttcggga tcaaaggcat cgttccccct cagaccaaat
     1441 tcactggccg tcttcggcat gaactgaaac agtcccatcg caccagcagg tgagacggca
     1501 aactgattac cacgggattc ggtgatcgca acgctgcgca gcagtccggg cggcaggtta
     1561 tatttttcct ccagttgaga cagtttcggt tgcagccagc ctaacagggc ttccccggtc
     1621 ttcgtcggtc gctggcggtt ttgcatggca ttaccgagtt tttcctgcgt cgcacgcata
     1681 ccctgtagcc aggattcacc gaaggctgct tccctcccgg ttgcctgaga agcctgagta
     1741 tccagcatgc cctgctgcca tactgtgggt gattgtgccc gggtgatgtt gccaggcttt
     1801 tctccggcat ccagttttgt ctgatacgtc tccatctctt tcttattgaa aaagaaagtc
     1861 ccgtctgaag cccagaaaaa accatgtgaa tccagccagt ccttattttc cctgccaaca
     1921 atggatgtca gtaatccgtc aacaaccggg taaagcgccg ttatcgcaaa aagaaggcct
     1981 ccggggccac tgagggcttt tgtcagcccc cgcacccatg acgccacttt cagcccgatc
     2041 agcgtaataa tgacattctg ccagcccccc agttctccgg cagccttatt cgccagggag
     2101 gccactgact caacgtcatt cagaaatgtg gtgataaacc tgttcacttc ctccggatgt
     2161 tgctgcatcc agtcaccgag tgtctccagc cagtggctga gcttcagcgc gtacggcatc
     2221 aacgcggtgc taatcgtcat cccgatgccg gaccaggtct gatcgagctc aacaagctct
     2281 tttcgtagct tacgggccag cgctgtacgc cccggcgtaa cctgcgaacg ggaagtaaat
     2341 tcgtccacat ctttcagcgc atgaccggag ccaagaaact gctgtccggc ataactgaag
     2401 cccagcgcgt tgccgtaggc agtttgttcg gactttgtca gtcgcggaaa aataaccgcc
     2461 agcttgcgca tgatggcttc agtgctgtca gtatttaaat caacactaat gcccgccctg
     2521 gctgcaacct gaaacaaatc ctgtaacaca ggatcaaagg accttccggc tctgaaggcc
     2581 gcttttgcat ttgcaagccg ggaaaatgcc ccagacattt ccccttcatc aacattattt
     2641 gcccgcgcag cccgtaacca tccgtccaga tttctggcct tcatgccaaa agcatcggat
     2701 tccacggaca gacggttcag atcacgggca aaacctgtta ccaggttctt cagccccccc
     2761 agcgtcagac tgacacccgc aagagccaga atctcgctac ggatccctga aaaaaaacgg
     2821 gacgcccgtt tcccggcatc ttccattcga cgggccgttt tatcagcatc ttttccggtt
     2881 ttttccagtg attcactggt tttcttctgt ccctgactga atgtgtcagc gacaccttcc
     2941 atcaccgtcg tgagccggtt aagggcagca tgtactgcct gttccccggc agtaaagtcc
     3001 ctgtcatcaa tcccgaggga cagaacaagc tcatcaagta cctgcgccat ttctgttctc
     3061 ctgtatcacc tgttcgttat gggcatccac atgaattatt tccagcagat cccataagtc
     3121 ctgcacacca aggacagaat ccagttcagc ttttgaagcc ttaccggagg agataacggt
     3181 cgcaatggta cggggaacat taacgtaatc caccaccccg aacggtctgt cggggtcgag
     3241 ataacgcggg gggatatcta gctgacgacg gtagcgaaaa aatccacatg cagcttaaag
     3301 acctccgcac gcagattaag acgggtaatg atttcttcaa tatcctcttc aacaagcggt
     3361 ctccggatgc tgcgtttttt cggatcggga acaaactgca cacagtccat
//
LOCUS       DADKRT010000273         3319 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.278, whole genome shotgun sequence.
ACCESSION   DADKRT010000273 DADKRT010000000
VERSION     DADKRT010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3319
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.278"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..211)
                     /locus_tag="JQ356_004087"
     CDS             complement(<1..211)
                     /locus_tag="JQ356_004087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623996.1"
                     /translation="MIRFRLYIPPVILGFVIVPLLVWPTVIVLAVLIFTLTFLAEIIF
                     SFPLLVVCISLQELQLELMVEYALFF"
     gene            complement(214..981)
                     /locus_tag="JQ356_004088"
     CDS             complement(214..981)
                     /locus_tag="JQ356_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623997.1"
                     /translation="MQPCPAMQALIEQIYHTFRRYRVPQKFVVCCEYCLSQQEQKALR
                     STSLRAIPYSLINAWNSSPGPDPQNSDEVRYFLPRLLEFVAQGHFDNIHVVFSLRRIN
                     LANKENWRADERAILQRFACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINS
                     VPGFWSTVSLACLLNRYCEDYIRDNQDDIDNVITTQINAWARNNHPLLKERARQAIEN
                     PLKQPEPMTEYQVWEDDWIIDECLCAMYDASSESLGK"
     gene            complement(984..1694)
                     /locus_tag="JQ356_004089"
     CDS             complement(984..1694)
                     /locus_tag="JQ356_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4623998.1"
                     /translation="MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQA
                     LDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPY
                     ISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW
                     KFHNNNSLRGFRDKQAELKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNA
                     ANARFVYQPFTRDQRARG"
     gene            complement(1710..3218)
                     /locus_tag="JQ356_004090"
                     /pseudo
     CDS             complement(1710..3218)
                     /locus_tag="JQ356_004090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312299.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
BASE COUNT          935 a          797 c          728 g          859 t
ORIGIN      
        1 tgaaaaaaag tgcatattca accattaact caagttgtaa ttcctgaaga gaaatacaca
       61 caaccaggag cggaaaggag aatattattt ctgccagaaa agttaacgtg aatataagta
      121 cggctaagac aataaccgtc ggccatacca ataatggcac gataacaaaa ccgagaatta
      181 cagggggaat ataaagccgg aatctaatca tttttatttt cctagtgatt cggatgatgc
      241 gtcatacatc gcgcataaac actcatcaat tatccagtca tcttcccaga cctgatattc
      301 tgtcattggt tcgggctgtt ttagcgggtt ctcaatcgct tgccgcgctc tttctttcag
      361 taaaggatga ttatttctag cccaggcatt gatttgggtg gtaatgacgt tatcgatatc
      421 gtcctggtta tctctgatat aatcctcaca atatctgttc aataaacagg caagagaaac
      481 ggtcgaccaa aagccgggaa ctgaattaat ggcatccagc aatggcgcaa gagcgatatc
      541 ggcacggaaa aacatttcca gcatatactg taattcgaca gcttcatcgc cggataccca
      601 atcagtcata tactggcagg caaatcgctg taaaattgcc cgttcatccg cacgccagtt
      661 ttctttgttg gcaaggttga tacggcgcag agaaaaaact acgtgaatat tgtcaaaatg
      721 cccctgtgca acaaattcca gtaaacgcgg cagaaaatag cggacctcat cgctattttg
      781 cggatcaggc cctgggctac tattccaggc attgattaag gaatacggga tcgctcgtaa
      841 cgatgtactc cgtaatgcct tttgttcctg ctgactcagg caatattcac aacaaaccac
      901 aaatttctgc ggcacccgat aacgacgaaa ggtgtgataa atctgctcaa ttaatgcctg
      961 catggcgggg cagggttgca tagttacccc ctcgcccgct gatcgcgtgt aaacggttga
     1021 tagacaaaac gagcattcgc cgcgttcagg cgaataaggg cgctacgcga aagggaaaag
     1081 ctggggcgaa tgcaactatt gcagtctcga cagctttcct ctgcgcaatt ttccactgag
     1141 taatgacgcg tgtagagttt cagttcggcc tgcttatcgc gaaatccgcg taaactgtta
     1201 ttgttatgaa atttccaggc atctttaaag acctgaaaga tatagacatc ctcaatccag
     1261 gagtcacatt ttttaagcgg gcgctttgct attatcaccc gctcatccgg atttagcatc
     1321 gccgtaaatt gtacggtgac gtcatttgtc gtgttcaggt cacattgaac atctggtaca
     1381 tcactgatat aggggtcaaa tccaaaatca gcaccacagg cacaaagacg gctaatggtg
     1441 gcggtatcga gggaaaatcc cggccatact ttgctggagg ttaagccaat atttaatgtg
     1501 acatcatatc gaagcaatcc ctcaagaccg tcagcaccga cgaacttttc cccttcatcc
     1561 agggcctggt taataagttg ctgaacaatg ccttcatccc agtatgccga tttgcagttg
     1621 gcaatcgtaa tatccacgcc tgtgaaggga tcagtaccgg caaggcttgc aaataatgta
     1681 ttaactaatt ccatttttat tatccagctt taaggtagcg tcttatacat cgggacataa
     1741 cctacatctt ccaccaaact ctgtccctgc ggcgttaaaa accactccaa caatttttgt
     1801 gtctctgacg tcgtattttc ccgcgttacc ataaaggcat cgatgatata gggatatttg
     1861 ccgttgcgaa tgttttcggc agtcggtgca ataccgttaa tcgctagcag ttttatattt
     1921 ttatcggcgt tcatttgtgt tgcgtaataa cggaaggtgt aacctattgc gttgtttgta
     1981 ttacggtatt cggcaacgac tttaatcatt ccctccatca tacttgccac ttctgtttcc
     2041 tgcggcgaga tcatgcggac atttttcatg acctgggatt gcatcaccgt ctggctacca
     2101 gagtcttccg ggcgttgcta ggtctggatc tcctgatcgt taccgccaac agtacgccag
     2161 ttggtaattg caccactgaa gatgtcacgc acctgttgtt cagtcaggga attaaccgga
     2221 ttatccgcat tgacgatgaa aacaaacgct tcacgggcaa aaggcgtgta cagcaaagta
     2281 atgcccgatt cctcagcgcg ttttttctgc ccaccggaag gttgcgccac aaaaataata
     2341 tcagcatcac ctttaacaat cctgttatac gcatcggggg tacgagagct ctccagatat
     2401 tccctggtgt gaaaatcttc cggtataacg ctcaaagcat aaaatgcaga ggcataaatt
     2461 gggtacgccg ccgtagcacc atcgagtcgc ggccagtttt gcgtaaactg aatttgcggt
     2521 ttaccacgca gtggtgtcag ttgattattg agtttatcgg gtcgccaggc ccaggtatca
     2581 atattttcgc gcacaccgac gccgggattg agctgtttat ataaataacc ctgataacca
     2641 gcgacaaaac caagcatgag aaggataaac aggagggaat tacggcaacg tagcccggat
     2701 gtaccggtta aaggatgtct ggttggccgg ccgtacccca gcgaaaaact gatatgcgcg
     2761 ccaacgggta taatgactat ccaccagtac tcacctccga ctactgagac taacaaaacg
     2821 cccagccagg ggagcataag atcagccaac caacccgatc ccatctggtg aaattgataa
     2881 tctgccagat gcagcgcgat tatccagcca accaggatta ataaaccggg tactaaaaaa
     2941 agacattgtc gccagacggc tatttctctt ttttctggtg cactatcgcc tgcccatact
     3001 cgccccgaga aaaatagcat taatgcgccc agcgccagca taaaaatgtt gagcagaagg
     3061 taacttgttg gcgtgataag gatattacaa acttcaataa taccggcaag tccgacaccc
     3121 agcatagcaa caaccgccgc caaaaattgc gtcagtatgg ggatgccgaa aaaagtcatt
     3181 accagcgagg acaaaatcca ttttctgttt tgcattattc tttccattct ttttgaatgg
     3241 tgaaattata ctccccgagt ccccttgccc cttctggaca cttttccgaa atgatggcgg
     3301 aaaaaaacgg gaccctttg
//
LOCUS       DADKRT010000274         3227 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.279, whole genome shotgun sequence.
ACCESSION   DADKRT010000274 DADKRT010000000
VERSION     DADKRT010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3227
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.279"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..1010)
                     /locus_tag="JQ356_004091"
     CDS             complement(<1..1010)
                     /locus_tag="JQ356_004091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HAY4623999.1"
                     /translation="MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDD
                     ISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRR
                     DNNYQFIVTINSKNYGCSLDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWK
                     ISQYNVFDIKFETIINPQFADRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFAT
                     GYLGIMTEGENFLCRLLTIEDEVLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQ
                     PYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSINENVHVLAGNHETNC
                     NG"
     gene            complement(1272..2862)
                     /locus_tag="JQ356_004092"
                     /pseudo
     CDS             complement(1272..2862)
                     /locus_tag="JQ356_004092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312389.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
BASE COUNT         1034 a          592 c          507 g         1094 t
ORIGIN      
        1 ttaccattgc aattcgtttc atgatttcca gctaatacat gaacattttc attgatactc
       61 attatgcgtt ttaacaaatc gatgataaat tgatcgccac agatattact aaatcgatcg
      121 ccggtttggt cgcccagaaa cgtacatggc gtgactgcgt ctttattaat aactaaataa
      181 ggctgaagac tttctaaaac attatctctt ctgttcaggt tactgattat tgtattaata
      241 ttagtgtcaa gttgctcatt aaagttttcc cttagcaata cgttgagaac ttcatcttct
      301 atagtaagca accggcaaag gaaattttct ccttcagtca tgattcccaa atatcccgta
      361 gcaaaaagcg cgtacaaaac tgcaccaact gaaccatcgg tatccccaaa ataggtcggc
      421 ctggtacttg tgggatcaac aggtgaacaa ttggagaaat agattctgtc agcgaactgg
      481 gggtttataa ttgtttcgaa tttaatatca aatacattgt attgcgatat tttccagttc
      541 cagatgggtt tgtacgactc agtaactgca acatcattag cattatcatt tactgtcata
      601 ttattaagta aataaacaac actgcaccaa ttaacatcag tattatcaag agagcaaccg
      661 taatttttac tattaattgt cacaataaac tgataattat tatccctacg tagaatatga
      721 gcacgcatgc ccgatagcat actatatttt tctgaatgat ccgtttgtat ggtaaatgaa
      781 attttgtcat cttgaataga ttgttggaac cgttctattt gccaatcatc tattttttcc
      841 acaacctcac cgagcattgt cctggcaata cttgatatat catcacctat accatttgca
      901 atatacccaa acagttcttt agtgaagttg gtaacatgct cttgcaccat atcatttgtt
      961 gcgattgtcg ttgtactgtc gttagtgcct gccacagttc caattttcat cttttacctc
     1021 atattattca ccgcgaggaa tacatagtta acattttatc ttatgacata cacctcatgt
     1081 tcgatggaaa aataattata ttttgcacaa atcattcagc cttaaagcat aatatgaaat
     1141 ttcttatttc atagcagaga aagtccctaa agattgtaga ggcgtcatca gaacatgtct
     1201 ctacaatcga ttaagaaaac ctatgaaata ctggcaggat taaaaagata taccacagca
     1261 ctcatggagt tttaatgtgg ttgaaaacaa ctaagccctg ggacaccttt tttatcacca
     1321 cgttcgttag gagctatctt ccaggaattt agccccatgg tataattatc aattttttga
     1381 tgctgatcta cccctaatcc ataatggcca tatttctgtt tagttttttt gagcgtctgt
     1441 ccacatttga agatatcttc aggttttggt ctgaaagcag tagtgttatt aaaataattg
     1501 tcatatacag gtgtggatgc tatagcattg cttctaatta gatggataaa acgatcatcc
     1561 atgtgttgtt tatgtttttt attaaatata tttgctaatt cctcaggatc aattgggtct
     1621 ttcatctgat taaatggaac ctgcaaagca cctagacaat aacattcatt ttcttcattt
     1681 cttattattc cgtgatgact gcttaaaact ttcgtttctg agtcataatt acaaacatcg
     1741 agcgttttaa ttaagttata cgtatcaccg gcagagagtt tatgatttgc tagtcgtgca
     1801 gtatagttac cattgaaatt gatttcataa tttccagcca gaacgacgtc atttttattt
     1861 atacgactat ctttattact ctccatattc cgcatagaat ttagcaaagt aaggatatat
     1921 ttatcaccaa aaatagtact gaatctatcg cctgtatgat ccccaagaaa gatacaaggg
     1981 gtaatcgcat cgccttttaa aaaaacatgt tgatgcaact tattcaagat catgtctctc
     2041 gtatctaata aagtaaagag tttttccaat tttttatttt catatgcgaa tgaagccatg
     2101 tcttcgtgtt ttaataattc acataataaa ctccacccct tttccctgat acctatatgt
     2161 cctgaaacga gcaatgcata aagtacagcg ccaactcttc catctgtatc gccaaaataa
     2221 gccgtgttgg gattttgtgg gttaatcaca ccacactgtt tataaaaatc tatttttgaa
     2281 aacacagaat taacatagct agcaaactta tccttaggaa acgtctcttt agagacatcc
     2341 caacgctagt cagctttaaa attaccgcta agaagagtaa agaaattttc aggtatgata
     2401 gaaaggccat taactttata aattatgtct gatttatctc cggagaaact aataaaataa
     2461 taaccatcct tacactcaat cgtaacggta atgggagacg acaattttat tacatggtta
     2521 ttgtctggta taattgtaaa gataaacgtg tcagtagtat tatcggcgaa actattatat
     2581 tcttgaatat ctatagatgg ctcattattg taaaaccata tttttttcta tctgagaact
     2641 atattcattt accttccagc gaccatgttg caggaaatag atgatatgca ggcctaaatc
     2701 gttatctatt tgcgaatgtt tatccagctt atcaatttca actatctttg aacgatgttt
     2761 tttatcaacc ttgccatggt gttgatgatt gttaacttga tctgaatgct tatcttgatg
     2821 gcttgaagag atgtgcttaa atatattgtg aaatactttc ataaataacc cgcaatattt
     2881 ataacttgtt agtaacaaaa taaacgatac atgtctgaaa gacatattta cgacgataca
     2941 aagtaataat acttatatat ccgatgattt taagcaccga gactatccgg tcttttacta
     3001 aataatggaa aacaatccat ccctggaaga taattgaaaa aaacaacaga ataagaatta
     3061 atcttaggat aaacatttat ttatcatggc cttttgaacg ctgaaaagta gcgctctgta
     3121 aagtaaaccc cgctatagtt atgctatgca tttgtcttta atgatatctc gtcattgtat
     3181 taacaggctg aaattatcat taatgcacat ttcaatatta gcaggga
//
LOCUS       DADKRT010000275         3226 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.280, whole genome shotgun sequence.
ACCESSION   DADKRT010000275 DADKRT010000000
VERSION     DADKRT010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3226
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.280"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..907
                     /locus_tag="JQ356_004093"
     CDS             <1..907
                     /locus_tag="JQ356_004093"
                     /EC_number="2.7.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pseudouridine kinase"
                     /protein_id="HAY4624000.1"
                     /translation="ANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNK
                     AWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDM
                     NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCV
                     KVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVY
                     YSDISGENSWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALS
                     CEYTNNPDLSIANVISLVENAERLN"
     gene            874..1833
                     /locus_tag="JQ356_004094"
     CDS             874..1833
                     /locus_tag="JQ356_004094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HAY4624001.1"
                     /translation="MVSGERRTSELKISPELLQISPEVQDALKNKKPVVALESTIISH
                     GMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVS
                     RRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQEL
                     ANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDS
                     ASEIARAMAVKWQSGLNGGLVVANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKES
                     TLFLLARVAELTGGDSLKSNIQLVFNNAILASKIAKEYQRLAG"
     gene            1927..3177
                     /locus_tag="JQ356_004095"
     CDS             1927..3177
                     /locus_tag="JQ356_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HAY4624002.1"
                     /translation="MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGG
                     IMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVL
                     PAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFAR
                     ILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVA
                     YLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
BASE COUNT          772 a          726 c          872 g          856 t
ORIGIN      
        1 ggcgaatatt gatgtcgccg gatattcaca tgaatcatta aattatgcgg attcaaatcc
       61 aggtaaaata aaatttacgc ctggtggagt cgggcgcaat attgcacaaa acctggcgtt
      121 gctggggaac aaagcctggc tactgagcgc cgtaggcagt gacttttatg gtcaatcgct
      181 gctaacgcaa accaatcaat ctggcgttta tgtcgataaa tgcctgattg tgccgggaga
      241 aaatacgtct agttatttat cattactcga taataccggt gaaatgctgg ttgctataaa
      301 tgacatgaat attagcaacg ctattacagc tgaatatctc gcacagcacc gtgaatttat
      361 tcagagggca aaggtcattg tcgcggactg taatatcagt gaagaggcac tggcatggat
      421 tctggataat gccgccaacg tacccgtatt tgtcgatccg gtttccgcat ggaaatgtgt
      481 caaagtgcgc gaccgtctaa atcagatcca cactctgaag ccaaaccgcc ttgaagcgga
      541 aaccctgagt gggattgcgc tgtcagggcg tgaagatgtg gcaaaagttg ctgcctggtt
      601 ccatcaacat ggcctgaacc gactggtatt gagcatgggc ggcgacggcg tttattacag
      661 cgatatcagc ggtgaaaata gctggtctgc gccgatcaaa accaatgtta ttaatgttac
      721 cggagcgggc gatgccatga tggcgggact tgcttcgtgt tgggtagacg gaatgccgtt
      781 tgccgaatct gttcgtttcg cacagggatg ttcgtcaatg gcgctctcct gtgaatacac
      841 caataacccc gatttatcga ttgccaacgt tatatcgtta gtggagaacg cagaacgtct
      901 gaattaaaaa tttcccctga attattacaa atttccccgg aagtgcagga cgctttaaaa
      961 aacaaaaaac cggttgtggc gctggaatcg accattattt ctcacgggat gccgttccca
     1021 caaaatgccc agaccgcaat tgaagtagaa gaaactattc gtaaacaggg cgctgtacct
     1081 gccactatcg ccattattgg cggcgtgatg aaagtgggtt taagcaaaga agaaattgaa
     1141 ttactgggtc gtgaagggca taacgtgacc aaagttagtc gtcgcgattt accttttgtt
     1201 gttgccgccg gaaaaaatgg cgcaaccact gtggcttcaa cgatgattat tgcggcgctt
     1261 gccggaatta aagtatttgc caccggggga attggtggtg tgcatcgcgg ggcggaacat
     1321 accttcgata tttctgccga tttgcaagaa ctggcaaata ctaatgtcac cgttgtttgt
     1381 gccggggcga aatctattct cgatttagga ttaaccactg agtatttaga aaccttcggt
     1441 gtgccgttaa ttggctatca gactaaagcg ctgcctgcgt ttttctgccg taccagctcg
     1501 tttgacgtca gtattcgtct cgacagcgcc agtgaaattg cccgtgcaat ggcggtgaaa
     1561 tggcaaagcg ggctgaacgg tggcctcgtg gtagcgaacc cgatcccgga acagtttgcg
     1621 atgccggagg aatctatcaa tgcagccata gatcaagccg tcgccgaagc cgaagagcag
     1681 ggcgttattg gtaaagaaag tacactgttc ctgctggcgc gcgttgctga gctgaccggc
     1741 ggtgacagcc tgaaatccaa tatccagctg gtattcaaca acgccattct ggcgagtaaa
     1801 attgccaaag aataccagcg tctcgcgggt taatttccga cgggcagaaa gccgtcgccc
     1861 gtactcatca agcataccaa aacctggcgc tgacgccggg tttactggca tgaagggaaa
     1921 atcattatgg atataatgag aagtgttgtg gggatggtgg tgttactggc aatagcattt
     1981 ctgttgtcag tgaataaaaa gagcatcagt ttgcgcacgg ttggagccgc actgctgctg
     2041 caaatcgcta ttggtggcat catgctctac ttcccaccgg gaaagtgggc agtagaacag
     2101 gcggcattag gcgttcataa agtgatgtct tacagtgatg ccggtagcgc cttcattttt
     2161 ggttcgctgg ttgggccgaa aatggatgtc ctgtttgacg gtgcgggttt tatcttcgcc
     2221 tttcgcgtac ttccggcgat tattttcgtt actgcgctca tcagtctgct gtactacatt
     2281 ggcgtgatgg ggctgctgat tcgcatcctt ggcagcattt tccagaaagc tcttaacatc
     2341 agcaaaatcg aatcttttgt cgcagtcaca actattttcc tcgggcaaaa tgagatcccg
     2401 gcgatcgtta aaccgtttat cgatcgcatg aatcgcaacg agttgtttac cgcaatttgt
     2461 agcgggatgg cgtccattgc tggttcgatg atgattggtt atgccggaat gggcgtacca
     2521 attgactacc tgttagcggc atcgctgatg gcgatcccag gtggtatttt gtttgcacgt
     2581 attcttagcc cggccaccga gccttcgcag gtcacatttg aaaatctgtc gttcagcgaa
     2641 acgccgccaa aaagctttat cgaagcggcg gcgagcggtg cgatgaccgg gctgaaaatc
     2701 gccgctggtg tagcgacggt ggtaatggca tttgtcgcaa ttattgcgct gatcaacggc
     2761 attatcggcg gaattggtgg ctggtttggt ttcgccaatg cctctctgga aagtattttt
     2821 ggctatgtgc tggcaccgct ggcgtggatc atgggtgtgg actggagtga tgccaatctt
     2881 gcgggtagcc tgattgggca gaaactggcg attaacgaat tcgtcgctta cctgagtttc
     2941 tccccatacc tgcaaacggg cggcacgctg gaagtgaaaa ccattgcgat tatctccttt
     3001 gcgctttgtg gttttgctaa ctttggttct atcggtgttg tcgttggcgc attttcggct
     3061 atttcgccaa aacgcgcgcc ggaaatcgcc cagcttggtt tacgggcgct ggcagcagca
     3121 acgctttcca acctgatgag tgcgactatt gccgggttct ttattggttt agcttgagtt
     3181 tcattgccgg atgtacgcgc ttattaagcg ttgcatccgg caatcg
//
LOCUS       DADKRT010000276         3200 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.281, whole genome shotgun sequence.
ACCESSION   DADKRT010000276 DADKRT010000000
VERSION     DADKRT010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.281"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            199..939
                     /locus_tag="JQ356_004096"
     CDS             199..939
                     /locus_tag="JQ356_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HAY4624003.1"
                     /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
                     LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
                     ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN
                     GRYVVSKPLSHEVVQPQLASNYTLPEAK"
     gene            complement(910..1677)
                     /locus_tag="JQ356_004097"
     CDS             complement(910..1677)
                     /locus_tag="JQ356_004097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HAY4624004.1"
                     /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
                     SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
                     PNDVVTVIATQPLTGNESWQKIMPGEWRLFCLGERVV"
     gene            complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JQ356_004098"
     CDS             complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JQ356_004098"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HAY4624005.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
                     RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            2701..>3200
                     /locus_tag="JQ356_004099"
     CDS             2701..>3200
                     /locus_tag="JQ356_004099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY4624006.1"
                     /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS
                     AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFFA"
BASE COUNT          766 a          812 c          820 g          802 t
ORIGIN      
        1 atcttaggaa ataaatgata catgcgcttt tcggactatt gaaaactgcc cctgtgctaa
       61 atttgtaaac cctgcgccga caggcttgcg taaaactctt ttggtgataa tgtgagcctt
      121 ccaaatccag actattccga tttgggatcc attttgccgt cctggcgtgt gtaaccgttt
      181 tatcaaggaa taagcagtat gcgtaaaatc gcattaattc ttgcgatgtt gttgatcccg
      241 tgcgtttcgt ttgccggttt gctgggcagc agtagctcga ccacgccagt gagcaaagag
      301 tataagcagc agttgatggg atcccctgtc tacatccaga tcttcaagga agaacgtacg
      361 ctcgatctct acgtcaaaat gggcgagcaa tatcagctgc tcgacagtta taaaatctgt
      421 aaatattccg gcggcttagg gccaaaacag cgtcagggcg atttcaaaag cccggaaggg
      481 ttttatagcg tccagcgtaa tcagttaaaa ccagacagcc gttactacaa agcgattaat
      541 attggtttcc ccaatgccta tgaccgtgcg catggttatg aagggaaata cctgatgatc
      601 cacggcgatt gtgtttccat cggctgctac gcaatgacca atcagggtat tgatgagatc
      661 ttccagttcg ttactggtgc gctggtgttt ggtcagccga gcgtgcaagt gagtatttac
      721 ccgttccgca tgaccgacgc caatatgaag cgccataaat attccaactt taaggacttc
      781 tgggagcaac tgaagccggg ttacgactac tttgagcaaa cccgtaagcc accgaccgtt
      841 tctgtggtca atggtcgtta cgtggtcagc aagccgttaa gccacgaagt tgtgcagcca
      901 caactggcat caaactacac gctccccgag gcaaaataag cgccattcgc ctggcataat
      961 cttttgccag ctttcattgc ccgtcagcgg ctgtgtcgca atcaccgtga ccacatcatt
     1021 cggtgtggtc tgcgagctga agtcgatttc tacatcctga tccagcagcg ttgccacgcc
     1081 aaacggtgcg cggcgggtga tccagtgcag attcgtcgag caatacgcca ttacatagcg
     1141 cccatccgaa agcagcatgt tgaaaacgcc cttctgccgc agttcgtccg ccagtgaagc
     1201 gatatattta aacactgctg ccatgttgcc cggcgtgcgc gggtaacgct gcgttaattt
     1261 atgcagcagc cagcagaagg ctttttcgct gtcggtttcg cctaccgggc ggaagttgcc
     1321 ggtttccagt gatttgtagc ccgtcagttg tccgttatgg gcataagtcc agttacgccc
     1381 ccataactcg cgggtaaatg ggtgagtatt ttccaacgcc acctcgcccc gattagcctg
     1441 gcgaatatga gccaccaccg aacaggattt tatcgggtag tcctggacaa gtttggcgat
     1501 gggggaatta aagctgggtt gtggatcttt aaatgtgcga cagcctttac cttcgtaaaa
     1561 ggtaatgccc cagccatctt tatgtggccc ggttccacca ccacgctgta caagtccggt
     1621 gaaactaaag cagatatcgg tagggacgtt ggcgctcatc ccgagcaatt cgcacatggg
     1681 taacctccac aacagcggga gcgcatggcc cccggcgaag attgatttaa gaattttcag
     1741 gtcggatgcg gcgtaaacga attattcggc ctacggttcg cgtacagatt tgtaggcatg
     1801 ataagacgcg tcagcatcgc atcaggcatc agcgcacaag tgccggatgc ggcgtaaacg
     1861 ccttatccgg cctacgccag acttacttaa ccatctcttt ttcaattaac tggatcagga
     1921 tatggatcac tttaatgtga atctcctgaa tgcggtcggc ataaccaaag tgcggtacgc
     1981 gaatttcgat atccgccgtg ccagccattt tgccgccgtc tttaccggtc agggtgatca
     2041 ctttcatccc cttctcacgc gccgctgcga tcgctttgat cacgtttgca gagttaccgg
     2101 aggtggagat ccccagcagt acatcgcctt cgcgacctac cgcttcaacg tagcgggaga
     2161 aaatatcatt gaaaccgaaa tcattaccga cgcaggaaat atgactaacg tcagaaatag
     2221 caatcgccgg gtagcccgga cggttttcac ggtagcgacc ggtcaactct tcggcaaagt
     2281 gcatagcgtc gcaatgggaa ccgccgttgc cgcaggaaag cactttgcca ccggctttaa
     2341 agctgtctgc taacaggacc gccgcgcgct gaatggcgtg aatattggcg tcatctttta
     2401 aaaagttagc cagcgtttcc gccgcttcgt tcagttcgtt acgaataaga tcttggtaca
     2461 tgaggatatc cttcagcata aatgtaatag acaaaatgca gtgtaccgga taccgccaaa
     2521 agcgagaagt acgggcaggt gctatgacca ggactttttg acctgaagtg cggataaaaa
     2581 cagcaacaat gtgagctttg ttgtaattat attgtaaata cattgctaaa tgtatttaca
     2641 tccactacaa ccatatcatc acaagtggtc agacctccta caagtaaggg gcttttcgtt
     2701 atgatgattt tgagtattct cgctacggtt gtcctgctcg gcgcgttgtt ctatcaccgc
     2761 gtgagcttat ttatcagcag tctgattttg ctcgcctgga cagccgccct cggcgttgct
     2821 ggtctgtggt cggcgtgggt actggtgcct ctggccatta tcctcgtgcc atttaacttt
     2881 gcgcctatgc gtaagtcgat gatttccgcg ccggtatttc gaggtttccg taaggtgatg
     2941 ccgccgatgt cgcgcactga gaaagaagcg attgatgcgg gcaccacctg gtgggagggc
     3001 gacttgttcc agggcaagcc ggactggaaa aagctgcata actatccgca gccgcgcctg
     3061 accgccgaag agcaagcgtt tctcgacggc ccggtagaag aagcctgccg gatggcgaat
     3121 gatttccaga ttactcatga gctggcggat ctgccgccgg agttgtgggc gtaccttaaa
     3181 gagcatcgct tcttcgcgat
//
LOCUS       DADKRT010000277         3195 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.282, whole genome shotgun sequence.
ACCESSION   DADKRT010000277 DADKRT010000000
VERSION     DADKRT010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.282"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            93..3023
                     /locus_tag="JQ356_004100"
     rRNA            93..3023
                     /locus_tag="JQ356_004100"
                     /product="23S ribosomal RNA"
     gene            3101..>3195
                     /gene="rrf"
                     /locus_tag="JQ356_004101"
     rRNA            3101..>3195
                     /gene="rrf"
                     /locus_tag="JQ356_004101"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          850 a          701 c          987 g          657 t
ORIGIN      
        1 tcaagctgaa aattgaaaca ctgaacaacg aaagttgttc gtgagtctct caaattttcg
       61 caacacgatg atgaatcgta agaaacatct tcgggttgtg aggttaagcg actaagcgta
      121 cacggtggat gccctggcag tcagaggcga tgaaggacgt gctaatctgc gataagcgtc
      181 ggtaaggtga tatgaaccat tataaccggc gatttccgaa tggggaaacc cagtgtgatt
      241 cgtcacacta tcattaactg aatccatagg ttaatgaggc gaaccggggg aactgaaaca
      301 tctaagtacc ccgaggaaaa gaaatcaacc gagattcccc cagtagcggc gagcgaacgg
      361 ggagcagccc agagcctgaa tcagtgtgtg tgttagtgga agcgtctgga aaggcgtgcg
      421 atacagggtg acagccccgt acacaaaaat gcacatattg tgagctcgat gagtagggcg
      481 ggacacgtgg tatcctgtct gaatatgggg ggaccatcct ccaaggctaa atactcctga
      541 ctgaccgata gtgaaccagt accgtgaggg aaaggcgaaa agaaccccgg cgaggggagt
      601 gaaaaagaac ctgaaaccgt gtacgtacaa gcagtgggag cacgcttagg cgtgtgactg
      661 cgtacctttt gtataatggg tcagcgactt atattctgta gcaaggttaa ccgaataggg
      721 gagccgaagg gaaaccgagt cttaactggg cgttaagttg cagggtatag acccgaaacc
      781 cggtgatcta gccatgggca ggttgaaggt tgggtaacac taactggagg accgaaccga
      841 ctaatgttga aaaattagcg gatgacttgt ggctgggggt gaaaggccaa tcaaaccggg
      901 agatagctgg ttctccccga aagctattta ggtagcgcct cgtgaattca tctccggggg
      961 tagagcactg tttcggcaag ggggtcatcc cgacttacca acccgatgca aactgcgaat
     1021 accggagaat gttatcacgg gagacacacg gcgggtgcta acgtccgtcg tgaagaggga
     1081 aacaacccag accgccagct aaggtcccaa agtcatggtt aagtgggaaa cgatgtggga
     1141 aggcccagac agccaggatg ttggcttaga agcagccatc atttaaagaa agcgtaatag
     1201 ctcactggtc gagtcggcct gcgcggaaga tgtaacgggg ctaaaccatg caccgaagct
     1261 gcggcagcga cgctgatgcg ttgttgggta ggggagcgtt ctgtaagcct gtgaaggtgt
     1321 gctgtgaggt atgctggagg tatcagaagt gcgaatgctg acataagtaa cgataaagcg
     1381 ggtgaaaagc ccgctcgccg gaagaccaag ggttcctgtc caacgttaat cggggcaggg
     1441 tgagtcgacc cctaaggcga ggccgaaagg cgtagtcgat gggaaacagg ttaatattcc
     1501 tgtacttggt gttactgcga aggggggacg gagaaggcta tgttggccgg gcgacggttg
     1561 tcccggttta agcgtgtagg ctggttttcc aggcaaatcc ggaaaactaa ggctgaggcg
     1621 tgatgacgag gcactacggt gctgaagcaa caaatgccct gcttccagga aaagcctcta
     1681 agcatcaggt aacatcaaat cgtaccccaa accgacacag gtggtcaggt agagaatacc
     1741 aaggcgcttg agagaactcg ggtgaaggaa ctaggcaaaa tggtgccgta acttcgggag
     1801 aaggcacgct gatatgtagg tgaagtccct cgcggatgga gctgaaatca gtcgaagata
     1861 ccagctggct gcaactgttt attaaaaaca cagcactgtg caaacacgaa agtggacgta
     1921 tacggtgtga cgcctgcccg gtgccggaag gttaattgat ggggtcagcg caagcgaagc
     1981 tcttgatcga agccccggta aacggcggcc gtaactataa cggtcctaag gtagcgaaat
     2041 tccttgtcgg gtaagttccg acctgcacga atggcgtaat gatggccagg ctgtctccac
     2101 ccgagactca gtgaaattga actcgctgtg aagatgcagt gtacccgcgg caagacggaa
     2161 agaccccgtg aacctttact atagcttgac actgaacatt gagccttgat gtgtaggata
     2221 ggtgggaggc tttgaagtgt ggacgccagt ctgcatggag ccgaccttga aataccaccc
     2281 tttaatgttt gatgttctaa cgttgacccg taatccgggt tgcggacagt gtctggtggg
     2341 tagtttgact ggggcggtct cctcctaaag agtaacggag gagcacgaag gttggctaat
     2401 cctggtcgga catcaggagg ttagtgcaat ggcataagcc agcttgactg cgagcgtgac
     2461 ggcgcgagca ggtgcgaaag caggtcatag tgatccggtg gttctgaatg gaagggccat
     2521 cgctcaacgg ataaaaggta ctccggggat aacaggctga taccgcccaa gagttcatat
     2581 cgacggcggt gtttggcacc tcgatgtcgg ctcatcacat cctggggctg aagtaggtcc
     2641 caagggtatg gctgttcgcc atttaaagtg gtacgcgagc tgggtttaga acgtcgtgag
     2701 acagttcggt ccctatctgc cgtgggcgct ggagaactga ggggggctgc tcctagtacg
     2761 agaggaccgg agtggacgca tcactggtgt tcgggttgtc atgccaatgg cactgcccgg
     2821 tagctaaatg cggaagagat aagtgctgaa agcatctaag cacgaaactt gccccgagat
     2881 gagttctccc tgactccttg agagtcctga aggaacgttg aagacgacga cgttgatagg
     2941 ccgggtgtgt aagcgcagcg atgcgttgag ctaaccggta ctaatgaacc gtgaggctta
     3001 accttacaac gccgaaggtg ttttggcgga tgagagaaag attttcagcc tgatacagat
     3061 taaatcagaa cgcagaagcg gtctgataaa acagaatttg cctggcggcc gtagcgcggt
     3121 ggtcccacct gaccccatgc cgaactcaga agtgaaacgc cgtagcgccg atggtagtgt
     3181 ggggtctccc catgc
//
LOCUS       DADKRT010000278         3173 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.283, whole genome shotgun sequence.
ACCESSION   DADKRT010000278 DADKRT010000000
VERSION     DADKRT010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.283"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            346..505
                     /locus_tag="JQ356_004102"
                     /pseudo
     CDS             346..505
                     /locus_tag="JQ356_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066419.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(723..2813)
                     /gene="iha"
                     /locus_tag="JQ356_004103"
     CDS             complement(723..2813)
                     /gene="iha"
                     /locus_tag="JQ356_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional siderophore receptor/adhesin Iha"
                     /protein_id="HAY4624007.1"
                     /translation="MRITTLASVVIPCLGFSASSIAAAEDVMIVSASGYEKKLTNAAA
                     SVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTLILIDG
                     VRQGGSSDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKN
                     ADKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSL
                     SDTAATRIPYPTESQNYNLGARLDWKASEQDVLWFDMDTTRQRYDNRDGQLGSLTGGY
                     DRTLRYERNKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVLKRDKWGLAGQPRE
                     LKESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVVLASTGETFRQKSWSVFAEDE
                     WHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLH
                     KGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIVSY
                     SINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSY
                     TPEHMVNAKLNWQITEEVASWLGARYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKAW
                     TVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYSAGKSTLYAGDYFQTGSSTTGYV
                     IPERNYWMSLNYQF"
BASE COUNT          795 a          836 c          732 g          810 t
ORIGIN      
        1 tgacctctca gtaaatatca atacggttct ggcgagccgc ttacgtgcag cagtcttatc
       61 cggcagttta aaggggagga cggagaccaa tgaggcactg gagcagattc agtgcagagg
      121 tgacctgctt tatcaaactt aattgtgaca aaatggcgat tgagaaggtg caattgactt
      181 atccggattc ggtcgtggcg aggtggtgcc cctgcattct gctaaccggg ttatgagcca
      241 ggagtcagcg atagacaaag ggacttatct gaccgggccc ccggaaaaat ggcgggagag
      301 aatgatacct tcctgctgac gagaccggac tttgagatga cgagcgatag tgcggcagtg
      361 atgtacagcc tgatcggtag ctgcaaaact taacggaatc gagccggaaa cgtggctacg
      421 ccacgtgatc agtgtaatca acacctggcc tgccaaccgc atgaaagagt tgttgccctg
      481 gaacgtcact ctctctgtaa actaattttt accccacgtc cttcacggtg cgcttacact
      541 ctggacaagt atgtaaatga taagttaaaa ataatccgtg catttcctgt gacgatatta
      601 gttgttggta acgaaatctc attagcggat cggaaatgca cttaacctaa tacgttgcca
      661 ctgttccgcc aggagttgca gtggcaacgt attctaccgt cagtgatagc gttttgttat
      721 tatcagaact gatagttcag cgacatccag taatttcgct caggtatcac atatcctgtt
      781 gttgatgatc ccgtctggaa gtaatcaccg gcatacagcg tactcttacc ggcactgtac
      841 aggctcacgt cactgtaatc cttgttgagc aggttattca ccgcagcatt cagcgtcagg
      901 gcatccgtca tcttccagga cagacctgca tccaccaccg tccaggcttt caggtattct
      961 cctttctcat catacacttt cttctgtaca gcgctcagtg acgaataatt ctgggtgaaa
     1021 cgtggtgttt tcccgcgata acgggcaccc agccatgatg ccacctcttc ggtgatctgc
     1081 cagttcagtt tcgcattcac catgtgttca ggggtataac tcagcggcgc acctttgtta
     1141 tcaccatcac gttgttcact tcgggtccag gtgtaattca gtgacagcgt gacatcctct
     1201 gaccacagcg gcaatgtgcc ggcaaattcc acaccgtgca accgggcctt tccgctgttt
     1261 acatagctat tggtgttatc atttatggaa taagagacaa tcttgttgga gaagtcagtc
     1321 ataaaacctg tgacattggc attcagaccg gcggggttat cgtaatacac cccagcctca
     1381 taactgacgc tctcttccgg cttcaggtcg gggttaccaa gtagatttgt ttttccctgc
     1441 ccggacacac cactaatccc tttatgtagc tgccccattc tgggtgcctt atatcccgtg
     1501 gtcacaccgc ctttcagcgt ccaggcatct gccacatccc agaccagata tgcacgcgga
     1561 ctgaagtgtc ccccgaattg ctcatgatgt tcatagcggc tgcccgcagt cagcgcaagt
     1621 gcatccgtga gatgccactc atcctcagca aataccgacc agcttttctg ccggaaagtt
     1681 tcacctgtgc tggcaaggac aactccgtct ttcatggacg agctctgaaa ctcgcccccc
     1741 accgtaacca gatgagattc tcccagaggg gtaagcagta atgaattcag gataaggttc
     1801 gattccttaa gctcccgcgg ctgaccggca agcccccatt tgtcgcgctt cagtacactg
     1861 cgtacgagct cacgaccttt attttctgtc tcgttccagt tcagatacga tttccatgtt
     1921 ccgaaggtga aagtatgatc atagccagct gaaattttgt tccgctcata gcgcagggtc
     1981 cggtcatatc cccccgtcag actccccagt tgcccatccc ggttatcata acgctgccgg
     2041 gtggtatcca tatcaaacca gagcacatcc tgctccgacg ccttccagtc aagacgtgca
     2101 ccaagattat aattctgtga ctccgtggga taaggaatac gcgtggctgc tgtatcgctc
     2161 agtgatgtga ccgatgagcc ctgacgctgt tgtgtgctac cgcgtacctg caggctgaca
     2221 gaatcatcca caagggggcc actgctccag aaattaaact ggctgctgtt accccatttg
     2281 ttgctttcct gcagattcag ccctgcattg acggaagaga gccatttgtc tgcattcttt
     2341 ctggtaatga tattcaccac accgcccatc gcatcagagc catacagtgt ggacatcggc
     2401 cccctgataa cctcaatacg ctcaatggcg gccagagggg gcatgaaccc ggtattcatg
     2461 gcagaaaaac cgttgggagt cacgtcactg cttccgccct gacgaacacc atcaatcagt
     2521 atcagcgtgt aactggctgg cattcctcgg atgctgattt ccagcccacc ggttttaccc
     2581 gtaccacttt caacatccac accctctact gatctcagag cctccgccag atcgtggtac
     2641 tggctggact gcaattcctc ctggctaatc acagaaacac tggcggctgc gttagtcagc
     2701 tttttctcat agccggatgc cgagacaatc atcacatcct ctgcagcagc tatgctgctg
     2761 gctgaaaatc cgagacaggg aatgactacg gaagccagag tggttattcg catattacta
     2821 atctccgatc atgttaaccg gcaagacaat acacaaatac aaacaataat gagaataatt
     2881 tatatttgcc ttttacaaaa aataaagatt attaacaaaa ctaaatataa ataacaactg
     2941 cctcggcatg ccagttaaca gctatccgta tggcgtgttc ggttttgcga ataaaaaatg
     3001 gttactgtag aagcggattt ccaccacatg tcaaccatga atggtcagtg gtgcgagacg
     3061 actgggatga tttggtcgat gacttcttcc ggtgaatact gatagaaaca ttgaaatatt
     3121 gtaagagaaa gcgttcaaaa ttctgtggca cgtgaaaaat tctacagcgt cat
//
LOCUS       DADKRT010000279         3144 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.284, whole genome shotgun sequence.
ACCESSION   DADKRT010000279 DADKRT010000000
VERSION     DADKRT010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.284"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..141
                     /locus_tag="JQ356_004104"
     CDS             1..141
                     /locus_tag="JQ356_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4624008.1"
                     /translation="MRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNP
                     RS"
     gene            210..1304
                     /gene="mnmH"
                     /locus_tag="JQ356_004105"
     CDS             210..1304
                     /gene="mnmH"
                     /locus_tag="JQ356_004105"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HAY4624009.1"
                     /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMN
                     NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRIDAWRAACLQNPQGILCCARGGQ
                     RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ
                     QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDES
                     RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
                     EYCEYLHHGLSAIKRRLGLQRYNELAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYD
                     PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR"
     gene            1420..1785
                     /locus_tag="JQ356_004106"
                     /pseudo
     CDS             1420..1785
                     /locus_tag="JQ356_004106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014543172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(2347..2796)
                     /locus_tag="JQ356_004107"
     CDS             complement(2347..2796)
                     /locus_tag="JQ356_004107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001348602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624010.1"
                     /translation="MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYI
                     NYMAIPENDGVFTWLPDFFSHVAVDISIYTNVEDDYFFSYFSLTNDDGGRFKKTLTVR
                     AREQVAKIVSKNDPDTKKVWCKYGKIPGQGDGVNLFLLVKLMLRIIL"
     gene            complement(2777..3144)
                     /locus_tag="JQ356_004108"
                     /pseudo
     CDS             complement(2777..3144)
                     /locus_tag="JQ356_004108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
BASE COUNT          841 a          727 c          712 g          864 t
ORIGIN      
        1 atgcgccctc cttcgccatt gagtctggca tggcgcaaat ttggcagcgg caaagcggta
       61 gaagatattg tgaccttgtt tacccagcgc aggccggaaa tcagcggatt tttagaaatt
      121 ttcggcaacc cacgcagtta aaaatcaagt ttccttgcgc gttggcgcgt aaaatagcgc
      181 gcaagctgat ttgaggttca cttttaacta tgcaagagag acacacggaa caggactatc
      241 gtgccctgct gattgctgat acgcccatta ttgatgttcg cgcccctatc gagtttgagc
      301 aaggcgcaat gcccgccgct atcaatctgc cgttaatgaa taacgatgaa cgcgccgccg
      361 ttggcacctg ctataaacag caagggtcag acgcggcgct ggcgctgggg cataaactgg
      421 tggcgggtga aattcgtcag cagcgcatag acgcctggcg ggcagcgtgc ctgcaaaatc
      481 cgcaaggtat tctctgctgt gcccgtggcg gtcaacgctc acatattgtg caaagctggt
      541 tgcatgcagc ggggattgat tatccgctgg tggaaggcgg ttataaggca ctgcgccaga
      601 ccgcgattca ggcgactatt gaactggcac aaaaaccgat agtgctgatt ggcggttgta
      661 ccggcagcgg taaaacgctg ttagtgcagc aacagccgaa cggtgtcgat ctggaagggc
      721 tggcgcgtca tcgcggttcg gcgtttggtc gcacgttaca accacaactt agccaggcga
      781 gttttgaaaa tctgctggct gccgaaatgc taaaaaccga cgcccgtcag gatttgcgcc
      841 tgtgggtgct ggaagatgaa agccggatga tcggttcgaa tcacctgccg gaatgtctgc
      901 gcgagcgaat gactcaggcg gcgattgcgg tggtagaaga tccgtttgag atccgtcttg
      961 aacgcctgaa cgaagagtat ttcttgcgta tgcatcatga ttttacccac gcgtacggcg
     1021 acgaacaggg ctggcaggaa tattgcgaat acctgcatca cggactttcg gctattaagc
     1081 gtcggctggg gttacagcgc tataacgaac tcgctgccca gctggatacg gcgctgacaa
     1141 cgcaactcac caccggcagc accgacggtc atctggcctg gctggtgccg ttacttaaag
     1201 aatattacga cccaatgtat cgctatcagc ttgagaaaaa agcggaaaaa gttgtctttc
     1261 gcggtgagtg ggcggaagtg gcggaatggg ttaaggcgcg gtaatgaggg acgtatttgt
     1321 attagtcgcg acttgatctg acacatggcc ttgaaaggtt gagagttacc ggttttgata
     1381 tgagtgtcga atccttatcc aaaacaagag gtaactctca tgcttcatac tgccaatccc
     1441 gtcatcaaac acaaagccgg tttgctcaat ctggctgaag aactcagcaa cgtatcaaaa
     1501 gcctgtaaaa tcatgggcgt ttcgcgtgat acgttttatc gttaccgcga actggtcgct
     1561 gaaggcggtg tggatgcgca gattaatcgt agtcgccgcg ctcctaacct taagaaccgt
     1621 accgatgagg caactgaaca ggctgttgtt gattacgccg tcgctttccc gacacatggt
     1681 cagcaccggg ccagcaacga gctgcgtaaa caggggggtt ttatctccga cagtggtgtc
     1741 cgttctgtct ggttactcca taaccttgag aatctcaaaa gacgatactg aacaaatttt
     1801 atcaggtgac gttccgtaaa aagttgtatg gagttctcga tgcagtcggc gcgactatca
     1861 gtacccccgc tgaaccctgg actatcgggc cgccgtactg gggcatgtca ccctggcgtg
     1921 ccgctggttt tccgctaatg gtttatttcc tctttctttc ccggcaagaa tttattttaa
     1981 tccggaagga ttatttattt tcagataggg actcacatta aacacgtaac attttaatta
     2041 atgcatggct gaatatgtat tacacaatgt cagatatcgt aaaagaccag tgcaattcta
     2101 tgtaaactct ctgactgttc attttatttg ttgtttcagg gtcggaactc accctcaata
     2161 aacaactgaa tacgagtaga tattcatcgt ctgagctata tggctttaca caatagccga
     2221 catgtctttt ctcagtcagg aattttactt ttcctcacta cgaagttgac gacttcgata
     2281 tgggatagac tcttaattca agcaattact ctgcacaagc atcaggcaat ccagctccaa
     2341 tatttgttat aaaataatgc gtaacattaa tttcaccaac aaaaaaaggt ttacaccatc
     2401 cccttgccct ggtatcttac catatttaca ccacactttt tttgtatctg gatcattctt
     2461 tgatacgatt ttcgccactt gttccctggc cctcactgtc aatgttttct taaacctacc
     2521 cccatcatca tttgttaggg aaaaataaga aaaaaaataa tcatcttcta catttgtgta
     2581 tattgatata tccaccgcta cgtgcgaaaa aaaatccggg agccatgtaa aaactccatc
     2641 attttctggt attgccatat agtttatgta atgtttactt acaagagatt catctttgta
     2701 taaataaaga taagtaatta cgcataaaac aacaatgatt ataatagcaa aaataaatat
     2761 tatcatcttt gatagattac ttgagatagc cagcatcttg taaagccttt atcgtttttt
     2821 tatgctctgg attaatataa tcactacatc tatctgagca atctgttgtt gatggacatg
     2881 tcaacccatg gtcatttaca gccaagtctt ttttattatc ttcaatcatt tcagaatggg
     2941 atagctttac ttttctgccg tacataccga acagatttaa tccgtaatct ctaatctctt
     3001 tttcataacc cagccctttc gccgatcggc taacaccagc gtcatttaat ttagacactc
     3061 gacaaaatgc catacaatgg aaaaattgat cagtcccacc taaatttaat ctcttcataa
     3121 gtatcagata atatatccca tgct
//
LOCUS       DADKRT010000280         3124 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.285, whole genome shotgun sequence.
ACCESSION   DADKRT010000280 DADKRT010000000
VERSION     DADKRT010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3124
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.285"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            598..882
                     /locus_tag="JQ356_004109"
     CDS             598..882
                     /locus_tag="JQ356_004109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858243.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY4624011.1"
                     /translation="MIYGGFMKSGVQLNLRARESQRILIDAAAEILHKSRTDFILEMA
                     CKAAEDVILDRRVFNFNDRQYEEFIEMLDAPVADDPAIEKLLARKPQWDV"
     gene            870..1355
                     /locus_tag="JQ356_004110"
     CDS             870..1355
                     /locus_tag="JQ356_004110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4624012.1"
                     /translation="MGCVTAPEPLSSFHQVAEFVSGEAVLDDWLKQKGLKNQAIGATR
                     TFVVCRKGTQQIVGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDVSFRGKG
                     LGADLLHDAVRRCYRVAENIGVRAIMVHALTENAKQFYIHHGFKPSKTQVQTLFLKLP
                     Q"
     gene            1389..2567
                     /gene="ltrA"
                     /locus_tag="JQ356_004111"
     CDS             1389..2567
                     /gene="ltrA"
                     /locus_tag="JQ356_004111"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HAY4624013.1"
                     /translation="MCVATREPPGCDGQTLKMFDQQRDGNLYKIWNRLCSGTWFPPPV
                     LEKRIPKSNGKERILGIPTVSDRIAQGAIKLFMEEKLDPIFHADSYGYRPGKSAHDAL
                     KQCAIRCWRYSWILEVDISAFFDHVKHDLVLKALEHHGMPKWVILYCRRWMEAPMQSC
                     ENGELITRTRGTPQGGVISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRM
                     SDATRLKNRLSERFSEVGLVLNAGKTNIAYIDTFKRRNVATSFTFLGYDFKMRTLKNF
                     KGERYRKCMPGASNAAMRKITETIKKWRIHRSTAESLLDFARRYNTIVRGWIEYYGKF
                     WSRNFNYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLTLVRKEYPKLFVHWYLLRASNE
                     "
     gene            2650..2804
                     /locus_tag="JQ356_004112"
                     /pseudo
     CDS             2650..2804
                     /locus_tag="JQ356_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(2858..3124)
                     /locus_tag="JQ356_004113"
                     /pseudo
     CDS             complement(2858..3124)
                     /locus_tag="JQ356_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016154415.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          825 a          681 c          837 g          781 t
ORIGIN      
        1 cggcatccgg catataggca gcatgaacgc aacacaggct ctcgtacgga acgtgggaac
       61 ctgtcgtctc gatgctaagg gagcggcgcg gagcagaggc actgcaagcg cctgagtacc
      121 gatgcgagac acaggggcag atggcttcgt agtagtgagg aagtgcctgt aatgggcatg
      181 gagcgaaggg ggtcagtcga ggcgtttgag gttaccaatc gaagctatac ccggtaatgg
      241 cgcaggttga cctgcacttg gccaagtgga ttgcccgcaa acacaagcga gcgcgaggta
      301 gtctggtgcg tgcattcgag tggttactgc gaattcgtca cgactgcccg acgctgtttg
      361 cacactggtg cttagcttac gatacttgaa tggttcaacg acaagagccg tatgacgcga
      421 gagtgtcacg tacggttccg tgggagcgta ggggggcggt gcccctgcgc cacccgatat
      481 cccctttgag tgcggttacg tccacagagg taaatgccgc tgacgcggca tctgtaatct
      541 gttactttgt gtacatcatt tgctatatat tgtcaatatg ctattgttgt aaagcaaatg
      601 atatacggag gctttatgaa atcaggtgtt cagctcaatc tcagagcaag agaatcacag
      661 cggatactca ttgatgctgc tgcagaaatt cttcataagt cgcgtacaga tttcattctg
      721 gaaatggcct gtaaagctgc tgaagatgtt attctcgacc ggcgggtgtt taattttaat
      781 gacaggcaat atgaagagtt cattgaaatg cttgatgctc cggttgcaga tgatcctgcc
      841 atcgaaaaat tgctggcaag gaaacctcaa tgggatgtgt aactgcacca gaacctttat
      901 cctcatttca tcaggtcgct gaatttgtca gcggtgaagc tgtacttgat gactggttaa
      961 agcagaaggg gctaaaaaat caggcaatcg gagccacccg gacttttgtt gtatgcagaa
     1021 aaggtacgca acaaatagtc ggtttttact cactggccac tggtagtgtc aatcatacag
     1081 aagctacagg taaccttcgg cgcaatatgc cagaccccat tcctgtaatt atacttgcac
     1141 gcctggctgt agatgtgtca tttcgaggaa aagggcttgg cgcggattta cttcatgatg
     1201 cagttcgtcg ttgttacagg gttgccgaaa atatcggtgt gcgtgcaatt atggttcatg
     1261 cgcttacgga aaacgcaaaa cagttttata ttcatcatgg ttttaagcca tcaaaaactc
     1321 aggtgcaaac attgtttctt aaactccctc aatagggagt aatgcactgg tctgggcatc
     1381 atatctggat gtgcgtcgca acaagggagc cccccggatg cgacgggcag actttgaaaa
     1441 tgttcgacca gcaacgtgat ggcaatctat acaagatctg gaaccggcta tgttcgggaa
     1501 catggtttcc gccaccagtg ctggaaaaac ggatcccgaa gtcgaatggc aaggaacgca
     1561 ttctggggat cccaacagta tccgatcgaa ttgctcaggg agcgataaaa cttttcatgg
     1621 aagaaaagct tgacccgatt ttccatgctg attcatatgg ttaccgacca ggcaaatcag
     1681 ctcatgacgc tctgaaacaa tgtgccatcc ggtgctggcg ttatagctgg atactggaag
     1741 tggacatcag tgcgtttttc gaccatgtga aacatgatct ggtgctcaaa gctctggaac
     1801 accacgggat gcctaaatgg gtcatcctgt actgtcgacg ctggatggaa gcgccaatgc
     1861 agagttgtga aaatggagaa ttaataaccc gaacacgagg cactccgcag ggcggggtca
     1921 ttagtccgct acttgctaac ttgttccttc actatgcatt tgatttgtgg atggaaagag
     1981 aatatcgggg ggtaccgttt gagaggtacg ctgacgatat tgtagtacat tgttcacgaa
     2041 tgagtgatgc aacaaggcta aagaacaggt tatcggagcg cttctcggaa gtcgggctgg
     2101 tcctgaatgc agggaaaacg aatatcgcct acattgacac gtttaaaagg agaaacgtcg
     2161 caacgagttt cacctttctc ggatatgact tcaaaatgcg tacgctgaag aatttcaaag
     2221 gcgaacggta ccgaaaatgc atgccgggtg cgtcaaatgc agcaatgcgc aaaataacag
     2281 aaacaatcaa gaagtggcgt atacatcgct caacagctga gagtttgctg gattttgcga
     2341 ggcgctacaa tacgatagtg agaggctgga tcgagtacta cggaaagttc tggtccagaa
     2401 atttcaacta tcgactgtgg agtgcaatgc agtcacgtct gctcaagtgg atgcagtcta
     2461 aatacagact ttcgaaccgg aaggctcagc gaaagctgac gctggtaagg aaggagtatc
     2521 cgaagctatt tgttcactgg tatttactac gtgcatcaaa tgagtgatca agagccgtat
     2581 gacgcgagag tgtcacgtac ggttccgtga gcagccgggg agtgaaattc tctccggctg
     2641 actcgactcg cgggttccga cagcgatgac gaacatgcgg cggtgttgta ctcgctgatc
     2701 ggcacatgcc gtctgaacaa tgtggaacca gaaaatggct gcgttacgtc attgagcata
     2761 tccaggactg gccggcaaac cgggtacgtg atctgttgcc ctagaaagtt gatctgagct
     2821 ctcagtaaat atcaatacgg ttctgacgag ccgcttactt ttggcgtaat tctgctgcgc
     2881 ctttactgaa cacaatgccg tattcagcaa gaagtccacg aatgtgattt atcagttgtg
     2941 tcctttccat tgaaaccaac cgacgcatat tcaaaaaagt ttggacgtcc tgttgctcca
     3001 gagtttttat tggtacgggt cgtatagttc catgttggca ggcctcagct attgcctgtg
     3061 cgtcgttata atcatttttc tggcaccgct gataagcttt aacatgttgt gccggaagca
     3121 atat
//
LOCUS       DADKRT010000281         3111 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.286, whole genome shotgun sequence.
ACCESSION   DADKRT010000281 DADKRT010000000
VERSION     DADKRT010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.286"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..134
                     /locus_tag="JQ356_004114"
                     /pseudo
     CDS             1..134
                     /locus_tag="JQ356_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309413.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
     gene            384..1250
                     /gene="ospB"
                     /locus_tag="JQ356_004115"
     CDS             384..1250
                     /gene="ospB"
                     /locus_tag="JQ356_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspB"
                     /protein_id="HAY4624014.1"
                     /translation="MNLDGVRPYCRTVNKKNESISDIAFAHIIKRVKNSSCTHPKAAL
                     VFLGEKGFCDSNDVLSIMGQQIPRVFKNKMLYDYVFKNEKSKNDFLKMAESWLPQSEP
                     IVINNDDDALNAAAYFSVKKAKIKTVNDTDFKEYNKVYILGHGSPGSHQLGLGSELID
                     VQTIISRMKDCGILNVKDIRFTSCGSADKVAPKNFNNAPAESLSCILNSLPFFKEKES
                     LLEQIKKHLENDESLSDGLKISGYHGYGVHYGQELFPYSHYRSTSIPADPEHTVKRSS
                     QKKTFIINKELD"
     gene            1580..2320
                     /locus_tag="JQ356_004116"
     CDS             1580..2320
                     /locus_tag="JQ356_004116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HAY4624015.1"
                     /translation="MKTKNFLLFCIATNMIFIPSANALKAEGFLTQQTSPDSLSILPP
                     PPAEDSVVFQADKAHYEFGRSLRDANRVRLASEDAYYENFGLAFSDAYGMDISRENTP
                     ILYQLLTQVLQDSHDYAVRNAKEYYKRVRPFVIYKDATCTPDKDENMAITGSYPSGHA
                     SFGWAVALILAEINPQRKAEILRRGYEFGESRVICGAHWQSDVEAGRLMGASVVAVLH
                     NTPEFTKSLSEAKKEFEELNTPTNELTP"
     gene            complement(2680..2853)
                     /locus_tag="JQ356_004117"
                     /pseudo
     CDS             complement(2680..2853)
                     /locus_tag="JQ356_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858138.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
     gene            complement(2859..>3111)
                     /locus_tag="JQ356_004118"
     CDS             complement(2859..>3111)
                     /locus_tag="JQ356_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HAY4624016.1"
                     /translation="RLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERH
                     NLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
BASE COUNT          994 a          593 c          586 g          938 t
ORIGIN      
        1 cggtaagaga agttcatcat acttggcgca gttacgcgat gtttctgcta gaggtgatgc
       61 cgtaaagaac ggcagaacat taccggaaca agatagcggt ctacctgcac tggtatcaga
      121 cccggggctt ccccggatga tctccacggt actttaggta ctgtgtctat attatgtagg
      181 taggatcaat taactttgta gttgaaattc tttcattgaa ataatgaata aaaaagacaa
      241 accgcattaa acaatgccag aatataattg catttttgtt ccgttttttt aaatcatagt
      301 atacaaagaa gcttgcatac tatatgaaaa tataacaccc tttactatga tgtttataaa
      361 acaatatatg gagtcatgta ggtatgaatt tagatggtgt tagaccatac tgtagaacag
      421 tcaataaaaa gaatgaaagc atatcagata ttgcatttgc acatataata aaaagggtaa
      481 aaaattcatc atgtactcac ccaaaagcag cattggtttt tttaggagag aaaggttttt
      541 gtgatagcaa tgatgttcta tctattatgg gacaacaaat accaagagta tttaagaaca
      601 agatgttata tgattatgtt tttaaaaatg aaaaaagtaa aaatgatttt ctaaaaatgg
      661 ctgaatcatg gctaccacag agtgaaccaa tagtaataaa taatgatgat gacgcattga
      721 atgctgctgc ttatttttct gtaaaaaaag cgaaaataaa aacagtaaac gatactgatt
      781 ttaaagagta taataaggtt tatattcttg ggcacggtag tcctggttct catcaattag
      841 gccttggttc ggaacttatt gatgtacaaa caatcatttc aagaatgaaa gactgtggta
      901 ttctaaatgt gaaagatatc cgttttactt catgcggctc cgctgataaa gtggctccta
      961 aaaattttaa caatgcccct gctgaaagtc tttcttgtat ccttaactct ctgccttttt
     1021 ttaaggaaaa agaatctttg ctagagcaga taaaaaaaca ccttgaaaac gatgagtcat
     1081 tgagtgatgg tctaaaaata tccggctatc atggatatgg agttcactat ggtcaagagc
     1141 tttttcccta ctcacattat cgttcaactt caattcctgc tgatccggag catacagtaa
     1201 aaagaagctc tcagaaaaag acttttatta ttaataaaga actggattag tataaaattt
     1261 ttaacctata gttaattgtt tgcatttaag atgaagttat ttttttcttt agtagaaaag
     1321 tgcttcccta tgagggaaaa tcacaaatca tcataataca gagacaaaac gatacgaaca
     1381 aatagataaa aaacatcatt cttttactac attatttttc gtgaatatga aaaataatgt
     1441 tattacttta atataagact attttttgtt tttccatcac tctgttcaaa tttttccgca
     1501 tgacttgtgt tttttgtaac acagctcgtt ttttacagct gaccaaaatc atcaattaat
     1561 tatgctaagg aaataaatta tgaaaaccaa aaactttctt cttttttgta ttgctacaaa
     1621 tatgattttt atcccctcag caaatgctct gaaggcagaa ggttttctca ctcaacaaac
     1681 ttcaccagac agtttgtcaa tacttccgcc gcctccggca gaggattcag tagtatttca
     1741 ggctgacaaa gctcattatg aattcggccg ctcgctccgg gatgctaatc gtgtacgtct
     1801 cgctagcgaa gatgcatact acgagaattt tggtcttgca ttttcagatg cttatggcat
     1861 ggatatttca agggaaaata ccccaatctt atatcagttg ttaacacaag tactacagga
     1921 tagccatgat tacgccgtgc gtaacgccaa agaatattat aaaagagttc gtccattcgt
     1981 tatttataaa gacgcaacct gtacacctga taaagatgag aacatggcta tcactggctc
     2041 ttatccctct ggtcatgcat cctttggttg ggcagtagca ctgatacttg cggagattaa
     2101 tcctcaacgt aaagcggaaa tacttcgacg tggatatgag tttggagaaa gtcgggtcat
     2161 ctgcggtgcg cattggcaaa gcgatgtaga ggctgggcgt ttaatgggag catcggttgt
     2221 tgcagtactt cataatacac ctgaatttac caaaagcctt agcgaagcca aaaaagagtt
     2281 tgaagaatta aatactccta ccaatgaact gaccccataa agctggacag cctgtatcag
     2341 gctatggagg gcccatagac aaatctaccc tatatgagca taggaggagt ctatgggcac
     2401 accacgtttt acccctgaat ttaagggatt actggaaagg ctgggacata tccctccggc
     2461 agaagcagaa aaagcttatt atgctgccat cggaaacgat gatctggcaa cctgagttca
     2521 cagataaaac attctctagg aaactcgggg cggttccgtt caccacatgc aatgtggtgt
     2581 tgcaggggaa cggtctgcac catcccctat gtcgatcaat ataacagaaa tgacaacttc
     2641 agattcaggg cacaacctaa atatatttta ggtcacctct caaatcgttt gcctgatacc
     2701 gctccatttt ttaataaaaa aatcaatcat ttttgaatct ttgcttttca ttgcattgtc
     2761 aagcatagtg tccccactat ttgctttttg aaattttttg tttacatcaa ccaatccatt
     2821 attgataaaa tattctagca cttggtaatg actccaactt actgatagtg ttttatgttc
     2881 agataatgcc cgatgacctt gtcatgcagc tccaccgatt ttgagaacga cagtgacttc
     2941 cgtcccagcc ttgccagatg ttgtctcaga ttcagattat gtcgctcaat gcgctgagtg
     3001 taacgcttgc tgataacgtg cagctttccc ttcaggcgtg attcatacag cggccagcca
     3061 tccgtcatcc ataccacgac ctcaaaggcc gacagcaggc tcagaagacg c
//
LOCUS       DADKRT010000282         3102 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.287, whole genome shotgun sequence.
ACCESSION   DADKRT010000282 DADKRT010000000
VERSION     DADKRT010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.287"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..329)
                     /locus_tag="JQ356_004119"
     CDS             complement(<1..329)
                     /locus_tag="JQ356_004119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624017.1"
                     /translation="MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTA
                     GQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDALYAFKVL
                     FPSGKGF"
     gene            complement(395..739)
                     /locus_tag="JQ356_004120"
     CDS             complement(395..739)
                     /locus_tag="JQ356_004120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HAY4624018.1"
                     /translation="MTEADLYPHLAHLAGGQVSPYVAPLLDGRPSVALPWVVFSLISS
                     VSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENR
                     CYRATLEFQVTV"
     gene            complement(736..1182)
                     /locus_tag="JQ356_004121"
     CDS             complement(736..1182)
                     /locus_tag="JQ356_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HAY4624019.1"
                     /translation="MIEILLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEE
                     VVSRTPVRRGKLRRNVVILSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFY
                     WRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR"
     gene            complement(1179..1499)
                     /locus_tag="JQ356_004122"
     CDS             complement(1179..1499)
                     /locus_tag="JQ356_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HAY4624020.1"
                     /translation="MISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGA
                     EMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRL
                     GGEK"
     gene            complement(1539..1865)
                     /locus_tag="JQ356_004123"
     CDS             complement(1539..1865)
                     /locus_tag="JQ356_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HAY4624021.1"
                     /translation="MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSR
                     DKVLREDGELIPGEALTRMKGAAMRLTGMLYRNPDLAEREELLQGELPFSVSVLIYDL
                     RCPTVL"
     gene            complement(1862..2461)
                     /locus_tag="JQ356_004124"
     CDS             complement(1862..2461)
                     /locus_tag="JQ356_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001674594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HAY4624022.1"
                     /translation="MPAGKSLTPDDVRPMLEQMVTEAVSHIPVPRDGRDYDPDVLQKA
                     VLDAVSALPAPQDGRDATALEILPAIDVQKSFPRGTYATHQGGLWRAYEKTHGMRGWE
                     CLVDGVADIDVSMTGERLFSVVVRQSSGQRTEKTFSLPVMLYRGVFRAGETYHPGDTV
                     TWGGSLWHCNSMTEDKPREAHSSAWTLAAKRGRDAGGGK"
     gene            complement(2455..3102)
                     /locus_tag="JQ356_004125"
                     /pseudo
     CDS             complement(2455..3102)
                     /locus_tag="JQ356_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001600078.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="invasin"
BASE COUNT          671 a          971 c          770 g          690 t
ORIGIN      
        1 ttaaagccct taccggacgg aaacagcacc ttaaacgcat acaacgcgtc attgtcatag
       61 gcatcacgca gggcgttctg ggcctgattc agataaaaat tacccgacat ggaaatctca
      121 gacgacgccc ccagaccgtt gatgttctcc tgctctgtgg agcagagcgt ggtcacatca
      181 atatcctgtt tctgaccggc ggtgaactgg acttccttga tggtgcagtc caggcgcaga
      241 tattccgcct tatccatagt ttcagcagtc gccggggcag atgaaatcat cacctgcgtc
      301 agctgtgagc gttcatacaa agcagacatt ctgcctcctg ataataaaaa acccgcacgc
      361 ggcggggtat ggttttgtag aaaaaaagaa aaagtcacac cgtgacctga aactccaggg
      421 ttgcacggta acagcggttt tccggaatat agtcctgcat ttcactgacg gatcccgggg
      481 ccagcagcat tatggcttca cgggcgtcct gacgtatctg acgcgcctgc gtcacagtcc
      541 cggcataaac gtctatctgc accgacactg aggactccgc ctgcccgccc atcacgtccg
      601 ctgacaccga tgaaatcagg ctgaaaacca cccacggaag cgccaccgac ggcctgccat
      661 ccagcagggg ggccacatac ggggacacct gcccgccggc aagatgcgcc agatgaggat
      721 acaaatccgc ctccgtcatc gtctcagtac ctcatcaatg gcccggttca tccgcgcaat
      781 cgccacctga gctgcctgtt cactgcgcac atcaaacgcc gggcgcacaa acgggtgcgg
      841 tggcatattc acggtcccca tttccacaaa ccgccagtag aaagcattgc gcgggttatc
      901 cgccttcatg gtgttatcgc tgttaccggt gtccggatta acaccacgga tatggacacc
      961 ggattccatc ccgccatcgc gggagcgccg ggaaaggatc accacattgc ggcgcagttt
     1021 tcccctgcgt accggtgtcc gtgacaccac ttcttctttc agcacattcg cacccgcacg
     1081 ggttgcctca cgcagcaccc ggttattttc cgcaccactc agaagctgca aatcgcggct
     1141 gatgtcctcc agccccgaaa aatccagcag gatttcgatc atttttcccc tcccagccga
     1201 cagagaattt ccagacgccc gccggtcgca tccggcacgg gcagcccgac aacgttcagg
     1261 atccggtcac gccatggacc actcagcaca tgaagtcgtg acgctgccgt gatttcccga
     1321 ccggactgac cgcgcaccca gatgcggatt tccgcctgcg ccatttccgc accggactgc
     1381 atccgctccc ggctgctcct gcctcggata tccgcatgaa ttttcccgca tgacacccat
     1441 tcttccgtca tttctccggc agcgttacgg gttaacaccg ggttcagaac acttatcatc
     1501 tatgtcagac gacctgcaga tattgccatt ccccctcctc ataacaccgt cggacaacgc
     1561 aaatcgtaaa tcagcacgga aacagaaaac ggcagctccc cctgaagcag ttcttcccgc
     1621 tccgcaagat ccggattccg gtacagcatc ccggtcagtc gcatggcagc ccccttcatc
     1681 cgggttaatg cctcgcccgg gatcagttca ccgtcctcac ggagcacttt atcccggctg
     1741 ccctgaatgt aggccagcag cacggcggta gcctgacgaa ccttgtccat cagcatgtca
     1801 tcatccgcgt catggtcgac acgcagatgt gccttgatct cttccagtgt cagtaatgcc
     1861 gtcattttcc gcctcctgca tcccgcccac gttttgcagc cagggtccag gctgatgaat
     1921 gagcttctcg gggtttatct tcggtcatac tgttgcagtg ccacagcgag cccccccacg
     1981 tcaccgtatc gccggggtgg taggtttcac cggctctgaa cacaccgcgg tagagcatca
     2041 ccggcaggga aaatgttttt tccgtacgct ggccactgct ctgccggacc accacagaga
     2101 acaaccgctc acccgtcatg ctgacgtcaa tatccgccac cccgtcaacc aggcattccc
     2161 atccccgcat cccgtgcgtt ttttcatacg cccgccagag tccgccctgg tgtgtggcat
     2221 acgtgccccg gggaaaggat ttttgaacgt caatggcggg gagtatttcc agagccgtgg
     2281 catcacgccc gtcctgcgga gccggcaggg cactcaccgc atccagaacc gccttctgca
     2341 gaacatccgg atcgtagtca cgaccatcac gcggaacagg gatatggctt acagcctccg
     2401 tcaccatctg ttcaagcatc ggacgcacat catccggggt gagactttta ccggcaggga
     2461 tgctttcacc atatacgaac cgtttctttc gggcgtcatg gtgacctcgg ctacaccctg
     2521 cgtattagta gagaccgtat tctggctgat gatcatttgc gaggatggct ctgcactgaa
     2581 tgtcacgggt tgatgcgcaa ccgggttgcc aaactggtcg ttaacgtgag ctttaactgc
     2641 tacgtcttgt gcgaccatta cctgaccttc cggtatctcc agactggtaa tcgtcgcaga
     2701 attaacatct gcactggcat tcagtaatcg cgagatgact tcagtaggtt tatctgccag
     2761 agaggctgaa actgttttca gtccgacctc ggtgcttgtc acaagaattt cagcgaaacc
     2821 ccgatcatcc gtttcaacgc tggtgctgct tagcgtgacg gaggttccgc ggaaattaac
     2881 ttttatgcct tctaccgggt tgccgttagc gtcagtgacg cttgccgtca tggttgcgcc
     2941 ctcggtcgtg ctgacgacga atgagtatac agaggttaag gaggctagtt ttgcggtacc
     3001 agcatcggca atcaaagtca cctgtttcgt atcactgaca ccataattgt tcacgctaac
     3061 tgtcacgggg taggtgccgg attttgtacc gctcagtgta ac
//
LOCUS       DADKRT010000283         3097 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.288, whole genome shotgun sequence.
ACCESSION   DADKRT010000283 DADKRT010000000
VERSION     DADKRT010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.288"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..923)
                     /gene="curA"
                     /locus_tag="JQ356_004126"
     CDS             complement(<1..923)
                     /gene="curA"
                     /locus_tag="JQ356_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415966.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent curcumin/dihydrocurcumin
                     reductase"
                     /protein_id="HAY4624023.1"
                     /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLR
                     TVYLSLDPYMRGRMNDEPSYSPPVDIGGVMVGGTVSHVVESNHPDYQPGDWVLGYSGW
                     QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGGAGGAEKCRHAIEVLGFDVCLDHHAGDFAEQLVKACPKG
                     IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKR
                     IRLQGFIIAQDYGHRIHEFQKEMGQWVKEDK"
     gene            1104..1622
                     /gene="mddA"
                     /locus_tag="JQ356_004127"
     CDS             1104..1622
                     /gene="mddA"
                     /locus_tag="JQ356_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HAY4624024.1"
                     /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
                     ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
                     RLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKFGRWLDLTFMQL
                     QLDERTEPDAIG"
     gene            1619..2068
                     /locus_tag="JQ356_004128"
     CDS             1619..2068
                     /locus_tag="JQ356_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY4624025.1"
                     /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV
                     GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
                     LVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF"
     gene            complement(2069..2302)
                     /locus_tag="JQ356_004129"
     CDS             complement(2069..2302)
                     /locus_tag="JQ356_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcY family protein"
                     /protein_id="HAY4624026.1"
                     /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
                     QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
     gene            complement(2388..2561)
                     /locus_tag="JQ356_004130"
     CDS             complement(2388..2561)
                     /locus_tag="JQ356_004130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GhoT/OrtT family toxin"
                     /protein_id="HAY4624027.1"
                     /translation="MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW
                     PMSFPVALLFSLF"
     gene            2756..2851
                     /gene="yncL"
                     /locus_tag="JQ356_004131"
     CDS             2756..2851
                     /gene="yncL"
                     /locus_tag="JQ356_004131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HAY4624028.1"
                     /translation="MNVSSRTVVLINVFAAVGLFTLISMRFGWFI"
BASE COUNT          752 a          790 c          723 g          832 t
ORIGIN      
        1 attttatcct ctttcaccca ttgccccatc tccttctgaa actcatggat gcggtgacca
       61 taatcctgag cgataataaa cccttgcaag cgaatacgtt ttttcagcac cgttgccatc
      121 aacaggggta aacgatccgg accgggtggt agctctgtag cgttatagct gctcactaag
      181 ccacaaacgg gaatgcgcgc agatgtatta agtaatggta gcactgcatc aaatacctta
      241 ccgcccacgt tttcataata gatatcaata ccttttgggc acgctttcac cagttgttcg
      301 gcaaaatcac ccgcgtggtg atcaagacaa acatcgaagc ccagcacctc gatagcatgg
      361 cggcattttt ccgcgccacc ggcccccccc accaccctgc aacctttaag tttgccgatt
      421 tgccccaccg ttgctcccac aggacctgtc gccgcagcta ccaccaacgt ttcgccctct
      481 ttaggctgac cgatatccag cagccccata taagcggtaa agcctggcat ccccagcaca
      541 cccagcgacc acgatggatt ttgcggatga tcgccaagtt tcaccagatc atcaccactg
      601 gatatgtcat agtcctgcca tccactgtag cccagcaccc agtcgccagg ctgataatca
      661 ggatgattcg actccacaac atggctcacc gtgccgccga ccatcacgcc gccaatatca
      721 acaggcggtg aataagatgg ctcatcgttc atacgtccac gcatatacgg gtctagggac
      781 aaataaactg tgcgcagtaa cacctgtcct tcacccggtg tggcgacatc atcttcttca
      841 agacggaaat tctccggaac cggtgcgcca tgtggacgcg aggccagaac ccaacgtcga
      901 ttacgctgct tttgttgccc cataatgctc tcctgtgctt ttggcatgaa tccatcaata
      961 gtagcaggct cacgggattg gttttgtttg cagccgtcac atcccctctg caacacgcaa
     1021 taatttcatc gaggaatccg ttgcttcggg ctgttttcga tagtattgat aacatcatca
     1081 tcattatttt atcgaggcca gacatgtcca tccgttttgc ccgcaaagcc gattgtgctg
     1141 ccattgcgga aatttataac cacgccgtgt tgtatacggc ggctatctgg aatgaccaaa
     1201 cggttgatgc agataaccgc attgcctggt ttgaagcgcg gaccatagca ggttatccgg
     1261 tgctggtaag tgaagaagat ggcgtagtga cgggatatgc ctcgtttggc gactggcgta
     1321 gtttcgatgg ttttcgccat accgtggaac attcggttta tgtccatccc gatcatcagg
     1381 gcaaaggtct ggggcgtaaa ttgttaagcc gattgattga tgaagcgcgg gatagcggga
     1441 agcatgtcat ggtcgccggg atcgaatcgc aaaatcaggc ctcgctgcat ctgcaccatt
     1501 cgctgggatt tgtcgtcacc gcacaaatgc cgcaggtggg cactaaattt gggcgctggc
     1561 tggatctgac atttatgcag ttgcaactcg acgaacgcac tgaaccggac gcgattggat
     1621 gaatcagtcg ctcacccttg cttttttgat tgccgccgga attggtctgg tagtccagaa
     1681 cacgctgatg gtgcgcatca cccagacctc ctctaccatt ctcatcgcca tgttgctgaa
     1741 ctcactggtg gggattgtgc tctttgtttc tattttatgg tttaaacaag gcatggcggg
     1801 gtttggcgaa ctggtgtcca gcgtgcgctg gtggacactt atacccggct tgctgggatc
     1861 gttttttgtc ttcgccagta tcagcggata tcagaatgtg ggagcggcga caactattgc
     1921 agtactggtc gccagccagc taattggcgg tctgatgctg gatatcttcc gcagtcatgg
     1981 cgtaccacta cgggcgttgt tcggcccaat ttgtggcgca attttacttg tggttggcgc
     2041 ctggttggta gccagacgct cattttaatc agaggatggt gccgcctttg gttaactgtt
     2101 cgtggcgcgc ttccatatct tctttatgct tgcgaccgtg atgagcaata gcggtgcgca
     2161 aacgctgctg ctgggtgtag cgatcttccc gacttaactc cgcgtcatcg ctcagggcga
     2221 ttaataattc gttcatatgg gcaatgacgc tctcttcaat cgcggcatcc acgcgcgcga
     2281 tgacttcatc cagatgcgac atactttctc cttaaccact tgtgaaattt atcgattcat
     2341 ccaaatgata taagtctgcg tggtgccgtc aagccagtga gtaagattta aaacagtgaa
     2401 aacaacagcg ccaccgggaa actcatcggc catgttgccc ccaccagaaa ggcgcttaag
     2461 aaacggatgc gtttcttatc gtgagaaaga aaccaggtga taagaaatgc gattgctgcc
     2521 ataaccgcat aaaaaacaag catatgttga tagagagaca tgtacgggcg tccagccaga
     2581 tgaataaaac gcgcgcaaat atgcgtcatt ttttgacgtg catcaagttt tttcaccagt
     2641 ttgagaaaaa atcatcaaac agcaacttgc ccttatccat cttcagaatg agtattattg
     2701 cggattttct taacccgtac tatacacata ggggcaatga taaaaggtgg caaaaatgaa
     2761 tgtttccagt agaactgtag tactgataaa tgtctttgct gctgttggtt tgtttactct
     2821 tatctctatg agatttggct ggtttatttg atgtagtgat tttgcacgca gcacgtactg
     2881 tcagagaaat caactctctg acagtacgca agatcttctc atactctcca ggtttacaac
     2941 attatcctta atatttactt ctttttgctg gcatctacat tgaaatgagt agaaaacatc
     3001 cccctactgt cgtctataca aacagcttac tgattcaaac ggaatcttgt tttcacattt
     3061 ttctatcatg aatactttat acgcgcggga gtctata
//
LOCUS       DADKRT010000284         3064 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.289, whole genome shotgun sequence.
ACCESSION   DADKRT010000284 DADKRT010000000
VERSION     DADKRT010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.289"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(48..232)
                     /locus_tag="JQ356_004132"
                     /pseudo
     CDS             complement(48..232)
                     /locus_tag="JQ356_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311258.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
     gene            complement(394..468)
                     /locus_tag="JQ356_004133"
     tRNA            complement(394..468)
                     /locus_tag="JQ356_004133"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(433..435),aa:Arg,seq:cct)
     gene            complement(544..1476)
                     /locus_tag="JQ356_004134"
     CDS             complement(544..1476)
                     /locus_tag="JQ356_004134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HAY4624029.1"
                     /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI
                     RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGF
                     IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEY
                     MPIFNEETHDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL
                     MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS
                     HAQIRNDMSNKRKAEARQKAERAENIKKNDKNPA"
     gene            1770..2525
                     /gene="mlaA"
                     /locus_tag="JQ356_004135"
     CDS             1770..2525
                     /gene="mlaA"
                     /locus_tag="JQ356_004135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HAY4624030.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
                     NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR
                     FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
                     DGGDMADGLYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
     gene            complement(2707..3042)
                     /locus_tag="JQ356_004136"
     CDS             complement(2707..3042)
                     /locus_tag="JQ356_004136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624031.1"
                     /translation="MAESFATGSDHQVVNELNGERLREPNEVFKRLGRAIRYNFQVDD
                     AKFRRDNVKEIISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLS
                     APGVNFDDI"
BASE COUNT          767 a          706 c          711 g          880 t
ORIGIN      
        1 atcttttacg gggtgaaggt agatttcgta tgaagggtat ctgttgtctc ctgcaaagtc
       61 ataagcggat attttcctac ggtcagtatt ttttccttac cgtcaatctt gtagcgaagt
      121 tgccatacct tttcccggat acaggaacat aaaggtacag gccattacca tcgagaaggc
      181 ggtatggttt ttctttcggc tttgctgctt caatctgctt aacggtgagc atgggtaaaa
      241 atccggtggg taaaattatt ttatccactt tttacccgtc atggagtgcg gctgtcaacg
      301 atctgacgcg aaccatgacg aaccgtgaat atacggaagg cttgatattc aggggatttt
      361 gcggactggt acggatggga gcgaactgat aaatggtgtc ccctgcagga atcgaacctg
      421 caattagccc ttaggagggg ctcgttatat ccatttaact aagaggacaa tgcggcatga
      481 gtatacccgc taatggactg cggagtaagt acactgccgc tcgattgctt aaaccctcgc
      541 catttatgct gggtttttat catttttctt aatgttttcc gcacgttctg ctttttggcg
      601 tgcttctgct ttgcgcttgt tgctcatgtc gttacggatc tgtgcatgac tcattaacgc
      661 gaagataaag gtgccgccgc agatattccc cgctaaagta ggtagtgcga agggccaaat
      721 gaaatcgctc cagtgcagcg tgccgttaaa caccagatag aggatttcta cagaaccgac
      781 aacgatgtgg gtggtgtcac ccagtgcaat aagccaggtc atcaatataa tcaccacaat
      841 ctttgccgca cccgctgcag gaaacatcca aaccatagtg gcgatcagcc agccggaaat
      901 gatcgcgttg gcaaacatct cgctgggggt gttcttcatc acatccatgc cgattttgac
      961 aaatgcatcg tgagtttctt cattgaagat aggcatatat tcaaatgccc atgcagcaat
     1021 acctgtcccg agaatattac ccagcagcac gacgccccat aatcgcataa gtaagccgac
     1081 gttgctcatt gtcggttttt gcatgacggg tagtaccgca gtcacggtgt tttcggtaaa
     1141 taattgctgg cgggccataa tgacgataat aaaaccaaag gtataaccga gattctccaa
     1201 caagaagctg cccggcacgc cttccagttc gacatgaaat atcccttttg ccagtaacga
     1261 agcgcccatc gacagacccg ccgcaatggc tgaccacagt agtgccattg cgtcgcgttc
     1321 cagctctttt tcaccatcct ggcggatatg ttcatgaatt gccatcgccc gggaggggag
     1381 tcgatcttca tctatttcta tttttttgcc gcgctctttt tcttcgctct caacttcaat
     1441 ttcgtcgctg tgttgatcaa ttttgtcgtt gtccatggtc tcttctcttg aattagcacg
     1501 tatagctaaa gcgtagcggc ttttttgctc gcaactggcg ggagttactc tgaaaatgta
     1561 gaaaaggccg cgtttgcctt tttctgtttc tatagaatca agtagcctac agggcggcga
     1621 ttaccaggct atgatcaaat cagcaaatca gggcgtctgg acatcagttg acgtgctgtt
     1681 acaatcgccc acacctaaac aggcggatac ggtatcgttc cgtcatggat ggcaaactgc
     1741 ataagccata aaaaaacagg gagacattta tgaagcttcg cctgtcggcg cttgctctgg
     1801 gaactacgct tctggtgggg tgtgcgagtt ccggtacaga tcagcaaggg cgttctgacc
     1861 cgttagaagg gttcaaccgc accatgtaca acttcaactt caatgtatta gacccgtata
     1921 ttgttcgacc ggtcgctgtc gcctggcgtg attatgttcc gcaaccggcg cgtaacggtt
     1981 tgagcaactt taccggcaac cttgaagaac ctgcggtgat ggttaactac ttcttgcagg
     2041 gcgaccctta tcaggggatg gtccacttta cccgcttttt cctgaacacc attttgggga
     2101 tgggcggctt tattgatgtt gcagggatgg cgaacccgaa actgcaacgg actgaacctc
     2161 accgcttcgg tagtacgctt ggtcattatg gcgtgggtta tgggccttac gttcagttac
     2221 cgttctacgg tagcttcacg ctgcgtgatg acggtggtga tatggcagat ggtctttacc
     2281 cggttctttc ctggctgacc tggccgatgt ctgtgggtaa atggacgctt gaagggatcg
     2341 aaacccgcgc tcagctgctg gattccgatg gtctgctgcg tcagtcgtcc gatccttata
     2401 ttatggtgcg cgaagcgtac ttccagcgtc atgatttcat cgctaatggc ggcgaactca
     2461 aaccgcagga aaatccgaac gcacaagcga ttcaggatga tttaaaagat attgattctg
     2521 aataagaaac aaataaaaaa ggtgagtcgc aaaactcacc ttttttgttg ttatccctca
     2581 attaccacaa gtaaaaggag ataaaccgac aatgacccgg acgtaatgat gtaaaaatac
     2641 tgatgttcgt cactgactat ttccgatatt caggcgttga aaaatcaaaa aactggaaaa
     2701 ataattttaa atatcatcaa aattaacacc tggcgcagat agttgattaa tttcattttg
     2761 atattccgtc tggcgatttt gaagcctttt ttcaacttta tcttcgagat ccttaaagtc
     2821 tttgtattta ttttcaggat ggtcaacgtc aactttgtta gcgaataaag tagaaattat
     2881 ttcttttaca ttatcgcgtc taaattttgc atcgtccact tgaaaattat atcttattgc
     2941 tcgacctaaa cgtttaaaaa cttcgttagg ttctctcagt ctttccccgt tgagctcgtt
     3001 tacaacctga tgatcggaac ctgttgcaaa tgattctgcc atgatagctt tactgctttc
     3061 aaac
//
LOCUS       DADKRT010000285         2966 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.290, whole genome shotgun sequence.
ACCESSION   DADKRT010000285 DADKRT010000000
VERSION     DADKRT010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.290"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            141..2657
                     /locus_tag="JQ356_004137"
     CDS             141..2657
                     /locus_tag="JQ356_004137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY4624032.1"
                     /translation="MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYY
                     FDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLL
                     QPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQ
                     IALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPW
                     RLRNYSTWTRNDQASSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLA
                     SDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSG
                     DLEVTIEESDGTQRRFIQPYSSLPMMQRPRHLKYSATAGRYRADANSDSKEPEFAEAT
                     AIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGY
                     QWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFDEANTRNWDYNSRQKSEIQFNISQTI
                     FDGVSLYASGSQQDYWGNNEKNRNISVGVSGLQWGIGYSLNYQYSRYTDENNDRALSL
                     NLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHN
                     SSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDAN
                     GASGVRIQNYPGIATDPFGYAVIPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNR
                     GAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISS
                     KSQSWTVRWGNQADQQCQFAFNTPDSEPTTSVLQGTAQCH"
     gene            2668..>2966
                     /locus_tag="JQ356_004138"
     CDS             2668..>2966
                     /locus_tag="JQ356_004138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY4624033.1"
                     /translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT
                     VNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKL"
BASE COUNT          847 a          717 c          683 g          719 t
ORIGIN      
        1 ggcattatct gaacataaaa cactatcagt aagttggagt cattaccgaa atgggctgca
       61 atcaatgatt atggcggcag ttccgggaca gaaactcgtc cactgcaata acaaatataa
      121 aaaacacagg tcatcaggga atgccacaac gacaccacca gggacataaa cgcacaccga
      181 aacagttggc gctcatcatc aaacgctgtt tgccgatggt gctcactggc agcggcatgc
      241 tttgcactac cgctaacgcc gaagagtatt atttcgaccc cattatgctg gaaactacaa
      301 aaagtggtat gcaaacaact gatctgtcac gtttttcaaa aaaatacgca caactaccag
      361 gaacttatca ggttgatatc tggctgaata aaaagaaggt ttcacagaaa aaaattacat
      421 ttaccgccaa tgcagagcaa cttctgcagc cacagtttac ggtagaacaa ctacgtgagc
      481 tgggtattaa ggtggatgaa atcccggcgc tggctgaaaa agatgacgat agcgtgatca
      541 actcgcttga acaaatcatt cccggtacag ctgctgaatt tgatttcaat catcagcgac
      601 ttaatttgag cattccccaa attgcactgt accgtgatgc aagaggttac gtctcccctt
      661 ctcgttggga cgatggtata ccaacgctgt ttaccaacta ctcgtttaca ggttctgata
      721 accgttaccg ccagggcaat cgtagccaac gacagtacct gaatatgcaa aatggtgcta
      781 attttggccc ctggcgatta cgtaactatt ctacgtggac acgcaacgat caggcgtcaa
      841 gctggaacac tatcagtagt tatttacaac gtgatatcaa ggcgttgaag tctcagttgc
      901 ttctgggaga aagcgccacc agcggcagta ttttttccag ctacaccttt actggcgtgc
      961 aactcgcttc cgacgataat atgttgccaa acagccagcg cggatttgcc ccaacggtac
     1021 gcggtatcgc aaacagtagt gcaatcgtga ctatcaggca aaatggttat gtgatctatc
     1081 aaagcaacgt gccagcgggt gcctttgaaa ttaacgatct ctacccctct tccaacagcg
     1141 gcgatttaga agtcacgatt gaagaaagtg acggtacaca acgtcgcttt atccagcctt
     1201 attcttcatt acccatgatg cagcgaccta ggcatctaaa atatagcgcg accgctggac
     1261 gctatcgcgc tgatgcaaac agtgatagca aggaacccga atttgctgaa gccacggcaa
     1321 tatatggttt gaataatact tttacgctgt atggcggcct gctcggttct gaagattatt
     1381 atgcgctggg gatcggtatc ggcggcacac ttggcgcact gggcgcgttg tcgatggata
     1441 tcaacagagc tgacacccaa ttcgataacc agcactcttt tcatggctat caatggcgta
     1501 cgcagtacat caaagatatc ccggaaacca acaccaatat cgctgttagc tactatcgct
     1561 ataccaacga tggctatttt agttttgatg aagccaatac ccgcaattgg gactataaca
     1621 gtcgccaaaa aagtgaaatt caattcaaca tcagccagac aatatttgat ggggtaagtc
     1681 tgtatgcctc cggttcgcag caagactatt ggggcaataa cgagaaaaac aggaatatct
     1741 ctgttggggt ttccggcctg caatggggaa ttggttacag cctgaattat caatacagcc
     1801 gctacactga tgaaaataat gaccgtgcac tctctttgaa tctcagtatt ccgttagaac
     1861 gctggttacc gcgtagccgg gtttcctatc agatgaccag ccagaaagat cgcccaaccc
     1921 aacatgaaat gcgtcttgat ggctcactgc tggatgatgg tcgcctgagc tatagcctgg
     1981 aacaaagtct ggatgacgat aacaaccata acagtagcct gaacgccagt taccgttcac
     2041 cttatggaac cttcagtgcc ggatacagtt acggtaatga cagcagccaa tacaattacg
     2101 gcgttaccgg cggcgtggtt atccatcctc atggcgtgac gctctcgcaa tatctgggca
     2161 acgcttttgc gcttatcgat gctaacgggg cttctggcgt gaggatacaa aactatccgg
     2221 ggattgctac tgatcccttt ggctatgcag tgattcctta tctcacgact tatcaggaaa
     2281 accgtctctc ggtagatact acgcagctgc ccgataacgt cgatcttgaa caaacaacac
     2341 agtttgtggt gcccaacaga ggtgcaatgg tagcggcgcg tttcaacgcc aatatcggtt
     2401 atcgcgtact tgttacagtc agcgatcgca acggtaaacc gttgcccttt ggcgctcttg
     2461 ccagcaacga tgatacgggg caacaaagta tcgtcgatga gggcggcata ctatatctct
     2521 ctgggatatc gagtaaatca caaagctgga ctgtacgctg gggaaatcag gcagatcaac
     2581 aatgtcagtt tgcttttaat acaccggatt cagaaccaac aacctctgta ttacaaggca
     2641 cagcgcagtg ccattaagga taaaaaaatg aaaagagcgc ctcttataac aggacttttg
     2701 ttgatatcca catcctgcgc ttatgcctcc tcaggagggt gtggagccga cagcactagc
     2761 ggtgcgacaa attacagcag tgtggttgat gatgttacgg tgaaccagac agataacgtg
     2821 acaggacggg agtttacctc tgcaacgcta agtagcacta actggcaata cgcctgttcc
     2881 tgctctgcgg gtaaggcagt taaacttgtc tatatggtca gccccgtact taccaccact
     2941 ggacatcaga caggatatta caaact
//
LOCUS       DADKRT010000286         2942 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.291, whole genome shotgun sequence.
ACCESSION   DADKRT010000286 DADKRT010000000
VERSION     DADKRT010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.291"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            577..1293
                     /locus_tag="JQ356_004139"
     CDS             577..1293
                     /locus_tag="JQ356_004139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624034.1"
                     /translation="MNDNSLLRNSSLFIAYMGCVGWVSAYSYGWGTSFYYGFPWWVVG
                     AGLDDVARSLLYAIIVMGILFTGWGIGILFFLLIKKRSKIQDLSFFRLFFAITLLFFP
                     VIFELLILKQYFILPLSLSCIISSLVISIIIRIYGRIFSVSCFSDIPFVREHRIKLIM
                     AGFLVYFWLFSFLVGWYKPQLKKEYQMLCYNNSWYYVLARYDSRLVLSSSFKDDSNRF
                     LIFNTEQSGFYEINDVYVRK"
     gene            1845..2249
                     /locus_tag="JQ356_004140"
     CDS             1845..2249
                     /locus_tag="JQ356_004140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624035.1"
                     /translation="MNTALIVALMCMWYAVPAAAKETLLAMPRNSTEHCYAEINVHGP
                     YGVYFRVVPHPPGGKSWVECNSDYYYSDKPPGVQILGTRAGCRVYGICGTTSTLHVAG
                     RGVVCIKNICSPRGMIIHRIRKRPVVAVSDEM"
     gene            2312..2611
                     /locus_tag="JQ356_004141"
     CDS             2312..2611
                     /locus_tag="JQ356_004141"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624036.1"
                     /translation="MTKTVSTSKKTRKQHSPEFCSEALKLAERIGVAAAARELSLYES
                     QLYAWRSKLQQQMTSSERESELAAENARLKRQLAVQAEELAILQKAATYFAKRLK"
     gene            2608..>2942
                     /locus_tag="JQ356_004142"
     CDS             2608..>2942
                     /locus_tag="JQ356_004142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624037.1"
                     /translation="MKYVFIEKHQAEFSIKAMCRALRVARSGWYTWCQRRTGISPRQQ
                     FRQHCDSVVLAAAFTRSKQRYGAPRLTDELRAQGYHFNVKTVAASLRRQGLRAKASRK
                     FSPVSYRAHG"
BASE COUNT          824 a          605 c          667 g          846 t
ORIGIN      
        1 ttgtgggcca taaatattcc aaaaaaatag cccgctccgt ttattaccgg aacgggcgag
       61 agcatgacat tgtctgtaat tataatgaga ctgctgattc tacttatttt taatttcaag
      121 aaaagcgttt tctacaaaga attatgagat ttaatgtttt gtttagacaa tattgtcatt
      181 ctgttcaata atgaaagtct tcatcaacaa caagtaaaaa caacgtccct ctcatcgaac
      241 cggacttgca gatttcccgc atccggctct cttgcaacac atcagacctt cacgttcggg
      301 cggttatggg gaaggtccag caagctgtat gagccctaac tgtttgaata ccagtagatt
      361 accagaaact tctatcgatt gaagacatta ccaactagcg ttactaaatg ttgaccaagt
      421 tttgttcact tgtctggttt tgatagtagc attctgcaga gtattttgat atgataaata
      481 tgcattaaca atgatattat tgttaatttc ctagcatgaa aattaaaaga tcaacttttt
      541 atctcgaata ttttttacat tatcagttgg tttcttatga atgacaattc attgcttaga
      601 aattcttcat tattcatcgc ctatatggga tgtgtagggt gggtcagtgc ttattcttat
      661 ggctggggaa cctcttttta ctatggattt ccatggtggg ttgttggtgc aggtttggat
      721 gatgttgcca gaagtttact ctatgctatc atagtaatgg gtatactttt taccggttgg
      781 gggattggta ttttattttt tcttcttata aagaaaagaa gtaaaataca agacttgagt
      841 ttttttagac tattttttgc tattacccta ctgtttttcc ctgtaatatt cgaactttta
      901 attctcaaac aatatttcat acttccatta tcactttcat gcattattag ttcattggtt
      961 atttcaataa taattcgcat atatggacgg atcttttctg tatcatgttt ttcagatatc
     1021 ccttttgtta gagaacaccg cattaagtta attatggctg gttttttggt ttatttttgg
     1081 cttttttcct ttcttgttgg ctggtataaa cctcaattaa aaaaagaata tcagatgctt
     1141 tgttataata atagttggta ttatgttctt gctcgttatg attcacggct cgttttgtct
     1201 agttcattta aagatgacag taacagattc ttaatattta atacagaaca gtcgggattt
     1261 tatgaaatca atgatgttta tgtcagaaag taataatcct ctcccacaaa gtgaattaaa
     1321 cgaatatata atgcgttcga agtatatgta ttgagctgtc atactgagaa acaaacctta
     1381 gggcagcaca attaaagcca gaaacaacta tgcaagaaag ttactaaata agtgctcgga
     1441 acagtaaaac actcaggggg gactcagtcc agattatgta atcagataaa ttgccaaaca
     1501 tcacaaatca ccagcaggac tgagtgatgc cgagcattgc accaataccc cgtgatgaac
     1561 gatgcctgat gcagaaagct ccctataaaa caaagaacaa aaactacgac cggcgattca
     1621 ccgtcatact gatgctgcat cgtggtgaca ctgtctgtca ctttcatgtt gactgaacaa
     1681 ctctgctgcg aagaaggtgt accgccggcg ggatttgatt gtccggcgtc tagcttccac
     1741 ttccctgatg gaactgaaag ttgttatggc cggtcagctt gccctgtccg caggacatga
     1801 ggtgctgtga cggacagcac cagtaacgga aagtgacaat aaaaatgaat actgcgctga
     1861 tagttgcact aatgtgtatg tggtatgcgg tacccgctgc tgcaaaagag actttactgg
     1921 ctatgccacg taattcaaca gaacattgct atgcggagat taatgtgcac ggaccatatg
     1981 gggtgtattt ccgagtggtc ccgcatcccc ccgggggaaa gagctgggtc gaatgtaaca
     2041 gtgactacta ttactctgat aaaccaccgg gagtacagat actcggaacc cgtgcagggt
     2101 gtcgggtata cggaatctgc gggaccacct cgacactgca tgtggctgga agaggggttg
     2161 tgtgtattaa aaatatatgc agtccacgtg ggatgataat tcacaggata cggaaacgtc
     2221 ctgtagtggc tgtaagcgat gagatgtgat cttatccagc aatagtggac acgcggctaa
     2281 gtgagtaaac tctcagtcag aggtgactca catgacaaaa acagtatcaa ccagcaaaaa
     2341 aacacgtaaa cagcattcgc ctgaattttg cagtgaagcc ctgaagcttg ctgaacgcat
     2401 cggtgttgct gccgcagccc gtgaactcag cctgtatgaa tctcagctct atgcgtggcg
     2461 cagcaaactg cagcaacaga tgacctcgtc tgagcgtgaa agtgaactgg ccgctgaaaa
     2521 tgcccgcctg aagcggcaac tggcggtgca ggcagaggaa ctggctatcc tccaaaaggc
     2581 cgcgacatac tttgcgaagc gcctgaaatg aagtatgtct ttattgaaaa acatcaggct
     2641 gagttcagca tcaaggcaat gtgccgcgcg ctccgggtgg cccgcagcgg ctggtatacg
     2701 tggtgtcagc ggcggacagg gataagccct cgtcagcagt tccgtcagca ctgcgacagc
     2761 gttgtcctcg cggcggcctt tacccggtca aaacagcgtt acggtgcacc acgcctgacg
     2821 gatgaactgc gtgctcaggg ttaccacttt aacgtaaaaa ccgtggcggc aagcctgcgc
     2881 cgtcaggggc tgagggcaaa ggcctcccgg aagttcagcc cggtcagtta ccgcgcacat
     2941 gg
//
LOCUS       DADKRT010000287         2918 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.292, whole genome shotgun sequence.
ACCESSION   DADKRT010000287 DADKRT010000000
VERSION     DADKRT010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.292"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1322
                     /locus_tag="JQ356_004143"
     CDS             <1..1322
                     /locus_tag="JQ356_004143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415419.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY4624038.1"
                     /translation="LVVVFSWVFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTM
                     GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKSDGSLIKEYSVVALQGLTLVLF
                     IFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFI
                     PHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSL
                     AMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSID
                     APLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVQVAILIMLPTLGIGDMNNLYK
                     WLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFA
                     CLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK"
     gene            complement(1323..2231)
                     /locus_tag="JQ356_004144"
     CDS             complement(1323..2231)
                     /locus_tag="JQ356_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY4624039.1"
                     /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR
                     LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINDARV
                     AARIFLMPLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIG
                     PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI
                     ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLGDWSTERPGFQIYYPNRQY
                     MSCGLRAFLDYVKTGQISQSQRHRPQ"
     gene            2331..>2918
                     /locus_tag="JQ356_004145"
     CDS             2331..>2918
                     /locus_tag="JQ356_004145"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H oxidoreductase"
                     /protein_id="HAY4624040.1"
                     /translation="MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYR
                     RNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYI
                     DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIED
                     ADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL"
BASE COUNT          739 a          621 c          727 g          831 t
ORIGIN      
        1 ggctggtggt tgttttttca tgggtgttta tctttgcgct ctatttcaca ccttatgcgc
       61 taattgttgg tcagttaggc tcgaccttca aagatgggaa gggcggggtc agtacctgga
      121 ttaaacacac gatgggaccc ggactggctt atctcgccgc gtggacctac tgggtggtgc
      181 atattcccta tctggcacaa aaaccccagg caattctgat tgcgctcggt tgggcgatga
      241 aaagcgacgg ttcgctaatc aaagaatatt cagtcgtagc gttacagggg ttaacgctgg
      301 tgctgtttat cttctttatg tgggttgctt cacgcggtat gaaatcgctg aaaatcgtcg
      361 gttctgtggc agggattgcg atgtttgtta tgtcgctcct gtatgtggcg atggcggtaa
      421 ccgcgcctgc gattactgaa gtgcatattg cgaccacaaa cattacctgg gaaacgttca
      481 ttcctcatat cgactttacc tacattacca ctatttcaat gctggttttc gcggttggcg
      541 gagcagagaa gatttctcct tacgttaatc aaacgcgcaa cccaggaaaa gaatttccaa
      601 aagggatgtt atgcctggcg gtgatggttg cggtttgtgc cattctgggc tcactggcga
      661 tggggatgat gtttgactcg cgtaatatcc cggatgactt aatgactaac ggtcaatatt
      721 acgcctttca gaagctgggc gagtattaca acatgggtaa tactttaatg gtgatttacg
      781 ccattgcgaa taccctggga caagtagctg cgttggtatt ctcgattgat gccccgctta
      841 aagtgctatt aggtgatgct gacagcaaat atattccagc cagtttatgt cgtaccaacg
      901 cttctggtac gcccgttaat ggctattttc tgaccctggt gcaggtggca attctgatta
      961 tgctgccgac tctcggcatc ggtgatatga acaatctcta taaatggctg ttgaatctta
     1021 actcggtagt gatgccgctg cgttatttat gggtatttgt tgcatttatt gcagtcgttc
     1081 gcctggcgca gaaatataaa ccagaatatg tctttattcg taataagcct ctggcaatga
     1141 ccgtcgggat ttggtgtttt gcctttaccg cctttgcctg tttgacgggg atcttcccga
     1201 aaatggaagc cttcactgca gagtggacct tccagttggc gctgaatgtt gcaacgccgt
     1261 ttgtgctggt aggattagga ctgattttcc cgctgctggc gcgtaaagcg aatagtaaat
     1321 aattattgtg gtcggtgacg ctgactctgg ctgatctgac ccgtttttac ataatcgaga
     1381 aatgcgcgca agccgcagga catatactgg cggtttggat aatagatctg gaagcctgga
     1441 cgctctgtgc tccagtctcc cagtacacat tctaaacgac cagtatcaag gtactccttg
     1501 atctgttcat agagcagata cccgatacca gcacccatca aaacggcctc cagttcagca
     1561 tcaacatcat ccagaatgat atttcctgcg acagcaattt ccagctcctt tgcaaattgc
     1621 cagtggaaag gtttgccgct gggataacga aaaacaacac attgatgatt aagcagatca
     1681 tgaggatggc ggggtttgcc atatcttgca aagtactctg gcgttgctgc tacacataat
     1741 ttcactggcg ggccgatcgc cacgctgatc atatcttttt cgacgatgcc actaagtcga
     1801 acgccagcgt caaagccctg ttggacgata tcgacaagag agtcgtcagt tgtgagctcg
     1861 actttaatat caggatattc acgtgtgaaa ccaaccagta aaggcattaa aaatatacgt
     1921 gcagctaccc gggcgtcatt gattttgagc gttcctgtcg gtgtcagacg aaaatcattc
     1981 atctcatcta acatgatctg aatttcgtcg aaagctgggc gcaatcgttc atagagatta
     2041 gaacccgctt ccgttaacga tacgcttcgg gttgtccgat tgaataagcg aattttaaga
     2101 cgttgttcca gtgttttaat actatggcta atggcggacg aggataagcc taactcatcg
     2161 cccgctgcac gaaagctttg attacgggcc acggcaaaga aagtggcaaa gtcagacata
     2221 ttcatccgca ttagtgaaaa tccttcatta actcatcctg aatcatcacg tttacaggat
     2281 tatgccgcct gcgtaaagtg cgctccagaa cttaacgtgg aggtaaaatt atgcagtctg
     2341 aacgtattta tttggtatgg gcccatcctc gtcatgattc attgaccgca catattgctg
     2401 atgcgatcca tcagcgggca atggagcgga aaatacaggt gacggaactc gatttatatc
     2461 ggcgtaattt caacccagtg atgacgccgg aagatgaacc agactggaag aatatggata
     2521 aacgttattc tccagaggtt catcagcttt attcagagct gcttgaacat gacacgttag
     2581 tggtggtttt tcctctctgg tggtacagct tcccggcaat gctaaaagga tatattgaca
     2641 gagtatggaa taatgggctg gcttatggag atgggcacaa attaccattc aataaagttc
     2701 gttgggtggc gctggttgga ggagacaaag aatcatttgt ccagatgggc tgggaaaaaa
     2761 atataagcga ttatttgaaa aatatgtgca gttatcttgg tattgaagat gccgatgtca
     2821 ctttcttgtg taatacagtg gtattcgatg gggaagaact tcatgcgagc tattatcagt
     2881 cgttattatc tcaggtacgg gatatggtag atgcacta
//
LOCUS       DADKRT010000288         2912 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.293, whole genome shotgun sequence.
ACCESSION   DADKRT010000288 DADKRT010000000
VERSION     DADKRT010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2912
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.293"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            142..1746
                     /locus_tag="JQ356_004146"
     CDS             142..1746
                     /locus_tag="JQ356_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001696533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3987 domain-containing protein"
                     /protein_id="HAY4624041.1"
                     /translation="MNPDYVQSLQTSHHFPADLTYRLFPSELAYLIDDLYESTQLPLE
                     LIFNTVLATLSLSCQSLVDVVHPHTNMPEPCSLYLLAIAEPGAGKTTINRLVMNPCYE
                     FADRLIQQYEERNKDYKTELQIWNTRQKALAANLRKVVNRGYPGEQEEEALRNHERNK
                     PTRPVRPNFIYEDVSLKALVEGLNEHPEAGVISDEAVTFFRSYLKNYPGLLNKAWSGQ
                     PFDFGRADEKYHIAPRLTFSLMSQPDVFTNYINKNDVLAWGSGFLSRFLFSQVVSSSW
                     IRDYTRGEFRTISTLENFHKKINGFLLNHNINFPGMSTERKTLKLAKKALGEWQENQI
                     KIERKALAGGEWEHIRDIVLKAGSNILRIAGIFTCYCYKDAEEIESIALFKAMHLMDW
                     YLEEASTIFYPMSARCQFEQDACELYAWIMTRIRQNNWRAIRKTDIERYGPNRLRRAE
                     KLTPVLNQLICQGYLCIIRMRSHQALYVSVYCNNGYLLPLGAMYYEQFDIVLPENIHK
                     AKAYHVNIPPELIPSFASPFSEYSLF"
     gene            complement(2647..>2912)
                     /locus_tag="JQ356_004147"
     CDS             complement(2647..>2912)
                     /locus_tag="JQ356_004147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HAY4624042.1"
                     /translation="ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQR
                     IERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
BASE COUNT          833 a          597 c          603 g          879 t
ORIGIN      
        1 atcataaatg cgtcgggact ggtgaatgga tacaagccat tttattatcg acgtcagcga
       61 acatactcac aatgtcggta tatttctgaa ctgaacagta agttttgcgt tgattacagt
      121 atgcgaagga ggtccattac aatgaatccc gattatgtgc aatccttgca gacatcccac
      181 cacttcccag ctgatttaac ctacagatta tttcctagtg agcttgcgta tctcattgac
      241 gacttatatg aaagtaccca acttccgttg gagctcattt ttaatactgt actggcaacg
      301 ctctcactct cctgtcagtc attggttgac gttgttcatc ctcacaccaa catgccggaa
      361 ccctgctcac tttatctgtt ggcaatcgca gagccaggcg cgggaaaaac aacgataaac
      421 agactggtga tgaacccctg ttacgaattt gccgatcgac tcattcaaca atacgaagag
      481 agaaacaaag attataagac tgaactacag atctggaata cccggcagaa agcgcttgct
      541 gccaatttaa gaaaggttgt taaccggggg tatccggggg aacaggaaga agaggcgctg
      601 cgtaatcacg aaagaaataa accgacacgt ccggttcgac cgaattttat ctatgaagat
      661 gtttcgctta aagcgcttgt ggaagggctc aatgaacatc ctgaggcagg ggttatttct
      721 gatgaggcgg tcactttttt cagaagctat ctgaaaaatt atccgggcct gttgaataaa
      781 gcatggagtg ggcaaccgtt tgattttgga cgggctgacg agaaatacca tatcgcgcca
      841 cgtctgacat tttcgttaat gtctcagccg gatgtcttta cgaattatat aaataaaaat
      901 gacgtactgg cgtggggaag cggatttctt tcccggtttc tgttcagtca ggttgtaagt
      961 tcttcctgga tacgtgatta tacgagaggt gagttcagaa caatatcaac cctggagaac
     1021 tttcataaaa agattaacgg attcctgtta aaccacaaca ttaatttccc cggcatgagc
     1081 accgaaagga agacattaaa acttgcgaag aaagcgttgg gggagtggca ggaaaaccag
     1141 attaagattg aaagaaaagc gcttgcaggc ggggagtggg aacacatcag agatattgtt
     1201 ctgaaagcag gttctaatat actgaggata gctggaatat tcacctgcta ttgctataaa
     1261 gatgctgagg aaattgaatc aattgcgctt tttaaagcta tgcatctcat ggactggtat
     1321 ctggaggagg cgagcacaat attttatccc atgtctgcac gatgccagtt tgaacaggat
     1381 gcctgtgaac tgtatgcatg gattatgacc cgaataaggc agaataattg gcgtgctatc
     1441 aggaaaacag acattgaaag atatggtccc aatcgactga gaagagcaga aaaacttaca
     1501 cctgtactca atcagttaat ctgtcagggg tatttatgta tcatcagaat gcgatcgcat
     1561 caggcacttt atgtttctgt ttattgtaac aatggttacc tccttccttt aggcgcaatg
     1621 tattacgaac agtttgatat tgttctaccc gagaatattc ataaagcgaa agcatatcac
     1681 gttaatattc caccggaatt aattccgtca tttgcgtcac ctttttcaga gtatagctta
     1741 ttttgaaata accttacaca gataaaacaa aatcaaccaa ccttcattcg gaggttggtg
     1801 ataaggcgtt ttgcatatcc tgcacctatg caaatgttca ccaattatgg ggggtgaatg
     1861 agaatttctc tgaaaaaacc gctacggtag caacagtagc agcacatgca ccacatctgt
     1921 gatttaattt tgttttcata atgacctgct gtcagagctg gttgaataca ggagtgtgcg
     1981 cactggtgga agcatggctt tcgtttttta ttgatcgaaa gtgaatcgaa agattatttt
     2041 taacatagat taaagctaat cattaaccat attgtgtgag ttttcatata taacttcgtt
     2101 tgattttcgt cgtgatgagt gcaggtgtat atgataatgt cggtttctgc ctgaataacg
     2161 aatggttatc actgttactg aaaagagatg ctgttcaagt ttgcatttca ataggagagt
     2221 gaagaaaaat gatttgatat tttttctgta agataatggt ttgtcatgtt cgtattcaga
     2281 acggatgatt tcttattttt actcatcaaa catggataat tttaatttag gtttattact
     2341 ataattagta tctacccctt tatttatcat ccatctctgc ccttcatttt ccctctctgt
     2401 ctttacacat tccattactc ttattctcat ccagttatat tcactccctt ccttgtctaa
     2461 tcttcattgt caccattatc atggtatcca ccttctccat tcctcaatca taactactgt
     2521 aactcatatg atactcagat aagttattct ctactacgct attgctgata tccatctgtt
     2581 cctgttttca gtaaaataat aatttatttt aattttatcc atcatgagct gggtaatgac
     2641 tccaacttat tgatagtgtt ttatgttcag ataatgcccg atgactttgt catgcagctc
     2701 caccgatttt gagaacgaca gcgacttccg tcccagccgt gccaggtgct gcctcagatt
     2761 caggttatgc cgctcaattc gctgcgtata tcgcttgctg attacgtgca gctttccctt
     2821 caggcgggat tcatacagcg gccagccatc cgtcatccat atcaccacgt caaagggtga
     2881 cagcaggctc ataagacgcc ccagcgtcgc ca
//
LOCUS       DADKRT010000289         2899 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.294, whole genome shotgun sequence.
ACCESSION   DADKRT010000289 DADKRT010000000
VERSION     DADKRT010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.294"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            135..564
                     /locus_tag="JQ356_004148"
                     /pseudo
     CDS             135..564
                     /locus_tag="JQ356_004148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            751..915
                     /locus_tag="JQ356_004149"
                     /pseudo
     CDS             751..915
                     /locus_tag="JQ356_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001436458.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            1409..1987
                     /locus_tag="JQ356_004150"
     CDS             1409..1987
                     /locus_tag="JQ356_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624043.1"
                     /translation="MKVSFKSLGYIFHDIYNKKHTIDEFNDVVRKAVLSGKINELNAC
                     HKVAIFLAEKDNEITKKDKAKIIDTLTENYSIEFQQLMNISERTLNSSLYITPGESGF
                     VSFVNREGKICHTAYVKSSDNSMAYYHANYSSIDKYITDMCGLICMRHIESTCIIFYM
                     LDEKVLSAIAEFMNEKGWRAAFCSAKDLYKCV"
     gene            complement(2096..2354)
                     /locus_tag="JQ356_004151"
                     /pseudo
     CDS             complement(2096..2354)
                     /locus_tag="JQ356_004151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            2338..2899
                     /locus_tag="JQ356_004152"
                     /pseudo
     CDS             2338..2899
                     /locus_tag="JQ356_004152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          876 a          541 c          766 g          716 t
ORIGIN      
        1 attcctgccg gtatcaacgc cgacggcatg tattgccctg aatgcggtac ggttcactgg
       61 ccggatggcg ttattccgcc tttctgatgc ttccccgttt tgccgatatt tttcagcagg
      121 gaaaccgatg gcttaactgg ctggagaagc agccggtgca gatgagccgc ctggaacatt
      181 atgccggtca ggatgaaatt ggcctgcgtt acaacagcca ccggacaaaa cgagaagaaa
      241 accttgtgat gagtggcgac gagtttatgg aaaggttctc ctggcatgtg gcggataagg
      301 ggttccggat ggtgatacgg ggtcctgagt ccggtgaagc ggcgattact ggaagatgtg
      361 gtgtacgcca taacggagac agtgagaaaa acggcgaggc aaatcacaag gagagggatg
      421 tatcagcagt gactgaaggt tgacccgctg aagtgcgagc tgtgcggagg tcagatgcgg
      481 tttacggggc tgaagagggg ttaccgtctg gcagagcagg ttatgatgca tgagccgctg
      541 gctcgaatac ggtggtgcgg ctgagagtcg cagaggggaa gttgcgtcca tgttgagggg
      601 aacggagcaa aaaaccatca gagatacatt gaatcaatca atgtaagcaa tattaagtgt
      661 ctataccgat tacttgatga tcaggttgtg ttgaataaac gcgcattctt cggtgctttt
      721 ttaatctttt ggggatttaa attcctatcg atgaactgtc gatatgaaaa agcgagcatc
      781 atactgacgt caaacaaagg ggtcgcagac tggggagaaa tgttcggaga tcacgtgctg
      841 gcaacagcga tcctagatcg gctgctacac gctgaatatc aaaggagaga gttaccggtt
      901 aaaagagaaa cgtaaagctg gagtgctgac caaaaacaca acgccaatca gtgatgatga
      961 aatggtggaa aacggacagc atcagtaacg aaagtatctt agcaggcatg aaaatcgtcc
     1021 gcatccccta aacggtcaaa atgcttctgc cgtgaaggag ggagaatgcc atctcatcac
     1081 ttatatctgg cgaatgaaac acagatggtc ggccttgccc ccaaacacac ggcggtgcaa
     1141 aatggaatgg cagaaaactt cgtcaaaacg atgaaatatg attaaatcag tgttatgttc
     1201 gaacctgacg tgttaacagc agtaaagtag tctcgcgaag gtgttcaaac attataatga
     1261 atggcatcct catagtgcgc agggttatcg cttgctgcgg aaatatctga agcgacgtac
     1321 cagtaatggg gaaaatgata gctggtttct gaaaatatag aggaaaatgt gatatatata
     1381 tcctgttaat atttaaggag aatataaaat gaaagtctcg tttaagtctt taggctatat
     1441 ttttcatgat atatataata aaaaacacac tatcgatgag ttcaacgatg tggtaagaaa
     1501 agcagtttta tcaggtaaaa ttaacgagct gaatgcatgt cataaagtgg caatttttct
     1561 tgccgaaaaa gacaatgaga taacaaagaa agacaaagcc aagataatag atacattaac
     1621 tgaaaactat tccattgaat ttcaacaatt aatgaatatt agtgagcgca cgttaaattc
     1681 atctttatat attactcctg gtgaaagtgg ttttgtcagt tttgttaatc gtgaaggaaa
     1741 aatatgtcat actgcatatg taaaatcatc agataatagc atggcatatt accatgcaaa
     1801 ttatagcagc attgacaaat atattacgga tatgtgcggc cttatttgta tgaggcatat
     1861 tgagtctact tgcattattt tttatatgct tgatgaaaaa gttttatctg ccattgctga
     1921 atttatgaat gaaaaaggat ggcgggctgc gttttgttca gcaaaggact tatataaatg
     1981 tgtttaattt tagaaaaact atttggtaaa atccaacaag agtcgagagg ttcgcgttgc
     2041 ttcagcaggg cctcagcctg ttcaaccaga ctcagttgca ggtcgtgacg cagatttagt
     2101 ggtggtggtt gattgtcaga taccagccga tgatcttata gtgcatatca tcagactttg
     2161 agaagcatat ggttttgcgg gtaagccgct taagatgtgt ccgcaggttc agattatgtc
     2221 gctctatccg ctgagtgcat ttcttgctta taacatgact ggttgaggac aataaagttc
     2281 ggtataccgg ctcaggcatc ggtcatgtag aaggcaatgc taaactggct cagcaaacta
     2341 agagcagcgc gcatccactt acccaatgcg gttgagaaaa tagccttcga tcgctttcat
     2401 gtggcgaaac aaccgggtga ggtggtggat aaaacccgcc agaatgaaca tccgcatctt
     2461 cctgttgaaa gtcgtcgtca ggcaaaggga actcgcttcc tgtggcagca cagcgataaa
     2521 tggatgaccg aatccaggca ggaaaagctg atatggctgc gtgcgcagat gaagctgacg
     2581 agcctgtgct gggcgctgaa agaactggca aaggatatct ggagcagacc atggagcgag
     2641 gaaagacgca acgactggca gagatggctg tcgctggcgg ccaacagtga cgtccccatg
     2701 atgaagaatg tggctaaaac gatagggaaa aggttgtacg gtatcctgaa cgccatgcgc
     2761 catggcgtat caaacggaaa tgcggaagca ctgaacagca agatcaggct gctgagaata
     2821 aaagccaagg gctaccgcaa ccgggagcgc tttaagctgg gagtgatgtt ccactatggg
     2881 aaactgaata tggcgttct
//
LOCUS       DADKRT010000290         2877 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.295, whole genome shotgun sequence.
ACCESSION   DADKRT010000290 DADKRT010000000
VERSION     DADKRT010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.295"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(64..1803)
                     /gene="flhA"
                     /locus_tag="JQ356_004153"
     CDS             complement(64..1803)
                     /gene="flhA"
                     /locus_tag="JQ356_004153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhA"
                     /protein_id="HAY4624044.1"
                     /translation="MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAI
                     DADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVC
                     IGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIILTRVSDNGDIAHDVRN
                     QLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSL
                     ETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVIS
                     DGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMAQPSSETYGEIDGVL
                     GNDPAYGMPVTWIQPAQKAKVLNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQ
                     LHNRLSSMAPRLAEDLSAVLNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKD
                     HILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNLVNQAQQGGKVMLDSVP
                     VDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEV
                     PDELELKIMGALM"
     gene            1748..2533
                     /gene="lafU"
                     /locus_tag="JQ356_004154"
     CDS             1748..2533
                     /gene="lafU"
                     /locus_tag="JQ356_004154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lateral flagellar export/assembly
                     protein LafU"
                     /protein_id="HAY4624045.1"
                     /translation="MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSH
                     PPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEME
                     IVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHIDAMA
                     YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRI
                     EIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR"
BASE COUNT          677 a          782 c          777 g          641 t
ORIGIN      
        1 ggatcggtag gccggataag gcgttcacgc cgcatccggc agttgtgcac caatgctgga
       61 tacttacatc aacgccccca taatcttcaa ctccagctcg tccggcactt cgttatacga
      121 cagcacatgc agccccggcg caaacaacct tgcataacgc gccagcaaag ggcgcagctg
      181 cggtggcacc agcagcaccg ggtctttccc cgccgctttc atctgctctt tcacctgtgg
      241 catcgtactc tggaactggt tgagcatatt cgggtccact ggcacgctgt cgagcatcac
      301 tttaccgccc tgttgcgcct gattcactag gttagtcagc agattttcca gctcattatt
      361 cagggtatac accgtcagct cctgcttgcg aacgaacgga tgggtaatgc tgcgccgcag
      421 cgccaggcgc acatcggctg ccagcagaat atgatctttg gtcaccgcgc tactggcgac
      481 cagcacggtg gcgatggtga cgatatcgcg cagggaaacg ccttcggtca gcagcgcccg
      541 gtacactttc agcaactggc tgtaattgag caccgcgctt aaatcctccg ccaggcgcgg
      601 tgccatcgac gacaaacggt tatgcaactg cgtaatatcg tcatagttaa ataaatcagg
      661 aatatagctg cgcacaatct tatttacatg ggtagcaatc acgctggcgc tgtcgatcac
      721 ctgatacccc atattcagca ccttcgcttt ctgcgcaggc tggatccagg tcaccggcat
      781 cccgtacgcc gggtcgttcc ccagcacgcc gtctatctcg ccgtaggttt cgctggaggg
      841 ctgggccatc agtttatccg ccggaatatc cgcttcatca gccttaatgc cgttgatgaa
      901 aatagcgtac tggctgggct taaggcggaa gttttcccga atgcggatct ccggcagcag
      961 cacgccgttg ccgtcggata tcacctgtcg cacgccgcga atacgctggg tgagcgggtt
     1021 gccctgggct ttatcgacca gcgccaccag cttgtagccg aggcttaaac tgataggctc
     1081 gataagcgga atggtttccc aactgacctg ttgctcgctg gtttcggtga tggtgcgggt
     1141 cagcgtttcg agacttttct cttccgcttc cgccgcctgc gggcgtttgc tcatccgcca
     1201 gccggtaaag ccaagcaggg cgctgaacag caaaaacggc agatgtggca ttcccggcac
     1261 taccgccagt acgaacataa ttccggtagc ggtgtagagc accgatgggc ttgccagcaa
     1321 ctggttacgc acgtcatggg cgatatcgcc gttgtcgctg acgcgggtga ggataatcgc
     1381 cgccgcggtg gagagtagca gggaagggat ttgcgccacc agcccgtcgc cgatggtcat
     1441 cagcacatac tgctggaagg cggcgtcggc gctcaggttg tatttgaaga tcccgataca
     1501 gacgccgccg atcaggttga tcgccagaat catcatcccg gcgatagcat ccccgcgcac
     1561 aaatttcgat gccccgtcca tcgcgccgta gaaatcggcc tcgctggcaa catctttacg
     1621 tcgggtttgt gcctgcgcct gattgatcaa cccggcatta agatcggcgt caatcgccat
     1681 ctgcttaccg ggcatcgcat ccagggtaaa gcgggctgaa acctcggaaa tacgctcggc
     1741 ccctttggtg acgacgataa agttgattgt caacagcgtc agtaaatccg agcgtgaaag
     1801 cattatcgcc gcgctgcacg ggcagtcgat ttttaacggt ggtgggctgt cgccgttaaa
     1861 taaaatcagc ccgtctcatc cgccaaaacc tgccaccgtg gcggtgccgg aagaaacgga
     1921 gaaaaaagcg cgcgacgtca atgagaaaac ggcgctgctg aagaagaaat ccgccaccga
     1981 gcttggcgag ctggcaacca gtatcaccac cattgcccgt gatgcgcata tggaagcgaa
     2041 tctggagatg gagattgttc cccagggatt acgcgtgctg attaaagacg accagaatcg
     2101 caatatgttc gaacgcggca gcgcgcagat tatgccgttc tttaaaacgc tgctggtgga
     2161 gctcgcgcca gttttcgact cgctcgataa caaaattatt attaccgggc atatcgatgc
     2221 gatggcttac aaaaacaata tctacaacaa ctggaacctt tcgggtgacc gcgcgctttc
     2281 ggctcgtcgg gtgctggaag aggccggaat gccggaagat aaagtgatgc aggtaagcgc
     2341 aatggcggac cagatgctgc tggattccaa aaatccgcaa agcgcgggca accggcgcat
     2401 tgagattatg gtgctgacca aaagtgcgtc cgatacgctg tatcaatact ttggtcagca
     2461 tggggataaa gtggtgcagc cgctggtgca aaagctggat aagcagcagg tgctttcgca
     2521 gcgaacgcgt taaatgctga atctttacgc atttctcaaa ctctgaaatc actgtatact
     2581 ttaccagtgt tgagaggtga gcaatgcgta aaatcatgat tttcacttcc taaaacaccc
     2641 cttataatct ggtcatagag tcattatagc actggatgaa tatacagatg aggaaggttt
     2701 acagttacat tcgcttttcg tcaacgaaac aagcttttgg tgatagtcat cgaagacaga
     2761 gtaaggccat acaggattgg ttagccagcc atccagacca catcctagac gaatctctta
     2821 gttttgaaga tttaggacgt tcagcctttc acggtgacca tctaaaagaa ggtggag
//
LOCUS       DADKRT010000291         2860 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.296, whole genome shotgun sequence.
ACCESSION   DADKRT010000291 DADKRT010000000
VERSION     DADKRT010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.296"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..275
                     /locus_tag="JQ356_004155"
     CDS             <1..275
                     /locus_tag="JQ356_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001600920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624046.1"
                     /translation="YEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFEEKMGNEL
                     KIRTRMMEILRDGKINICEYINKEQLEKLNPPEDLRIAIKKLGWNN"
     gene            complement(347..1351)
                     /gene="argF"
                     /locus_tag="JQ356_004156"
     CDS             complement(347..1351)
                     /gene="argF"
                     /locus_tag="JQ356_004156"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HAY4624047.1"
                     /translation="MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLT
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD
                     GIQYRGYGQEIAETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED
                     VAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLP
                     AFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
                     "
     gene            1513..1929
                     /gene="rraB"
                     /locus_tag="JQ356_004157"
     CDS             1513..1929
                     /gene="rraB"
                     /locus_tag="JQ356_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HAY4624048.1"
                     /translation="MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLE
                     TLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAE
                     KFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH"
     gene            complement(1975..2477)
                     /locus_tag="JQ356_004158"
                     /pseudo
     CDS             complement(1975..2477)
                     /locus_tag="JQ356_004158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026287.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            2670..>2860
                     /locus_tag="JQ356_004159"
     CDS             2670..>2860
                     /locus_tag="JQ356_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY4624049.1"
                     /translation="MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLP
                     WALMKCKRYLYANMEVNGQR"
BASE COUNT          790 a          633 c          658 g          779 t
ORIGIN      
        1 agtatgaggg cgaacagctg tatcttaatg agttaggata tgtttatggt aatgaagaaa
       61 aaacaaatga aattgtaaat aacaatccgg gttatgtcgt tgagattttt gaagaaaaga
      121 tgggtaatga attaaaaatt agaacaagaa tgatggaaat cctccgggat gggaaaataa
      181 atatatgtga atatattaat aaagaacagt tagaaaaatt aaatcctccg gaagatttac
      241 gtatagcaat aaaaaaattg gggtggaata attgaactat tactgcataa aataatgtga
      301 tgccgggatg tttttgtatt tcccggcatc tttattgcga tatcaattat ttactgagcg
      361 tcgcgaccat caccgctttg atggtatgca tgcggttttc cgcctgatca aaaacaatgc
      421 tggcggcaga ttcgaagacc tcatcagtca cttccattcc gccatgtagg ccaaactctt
      481 ccgccatttt cttaccaagc gtcgtctggt cgtcatgaaa cgcgggcagg cagtggagga
      541 atttgacctc cgggttaccg gtcaactgca tcatcttgct gttcacctga taatcacgca
      601 gtaatgcaat ccgttctgcc catttctctt ttgcttcccc catcgacacc catacatcgg
      661 tatagataaa gtcagcacct tcaactcctt tggctacatc ttccgtcagc gtaatattcc
      721 cgccattttg ctgtgccaag gcgcggcatt ccgtaaccag cgcagcttcc ggccagcatg
      781 cctgtggcgc gaccagacgc aaatccagac cggtaagcgc cgcagcttcg agcatcgaat
      841 tgcccatgtt gttacgtgcg tcacctgcat agaccagcgt catttcgttg aatgctttac
      901 cgggtaaatg ctcctgcatg gtgaggagat ccgccagcaa ctgcgtgggg tgaaactcat
      961 tggtcaggcc gttccatacc ggcacgccag cgtattccgc cagtgtttcg gcaatctcct
     1021 gaccatagcc gcgatactga ataccgtcat acatgcgacc cagcacgcgg gcagtgtctt
     1081 taatcgactc tttatgacca atctgactgc cgcttgggcc gagataagta acgcgagcac
     1141 cctggtcata tgcggcaact tcgaaagagc atcgggtacg ggtcgagtct ttttcgaaga
     1201 tgagcgcgat gtttttacca gtgagtttgg cttcttcttt gccgcttttc ttatcggctt
     1261 tcagcttcgc ggctaactgc agcaggctgt tgagttcagc tggcgtgaaa tcgagtaatt
     1321 tcaggaaatg cttatgataa aacccggaca tagatccctc ctgtggctaa cgcctcaatg
     1381 aattaaaatt caatttatat ggatgattat tcatttgcaa gtctaaagca taaatctttg
     1441 tcacaaaggt ggaggcaatg tcagtggtat gtgacaataa gagtatcggc aggacattaa
     1501 gaggaatgag ccatggcaaa cccggaacaa ctggaagaac agcgtgaaga aactcgtttg
     1561 attattgaag aattactgga agatggcagc gatccggacg cgctgtacac catcgaacac
     1621 catctttccg cagacgatct ggaaaccctg gaaaaagcag cagttgaagc gtttaaactc
     1681 ggttacgaag tgaccgatcc agaagagctg gaagttgaag atggtgatat cgtgatttgc
     1741 tgcgacatcc tcagcgagtg cgcgttgaat gccgatctga tcgatgccca ggttgaacaa
     1801 ctgatgacat tggcggagaa atttgacgtt gagtacgacg gttggggcac ttattttgaa
     1861 gatcctaatg gcgaagacgg cgacgatgaa gattttgtcg atgaagacga tgacggggtt
     1921 cgccactaat taattgatta aaatgcccga tagcacacac tagcgggcat ttttttagag
     1981 ttcgcgcaac atccgcactt cacaatcaac atggcccgtg cagccaagtg catagtcgat
     2041 atgctcaaag cccaaatgct cataaagcgc aatggcttcc tttaaaaagc ggtcgtttcc
     2101 agatagcagc gtttgaagcc catctctcgt gcctgctcca tcgccattaa ggccagtttt
     2161 ttcgccagcc ctttaccgcg aatagccgga agaaaataca tcttttgcag ttcgcaaatg
     2221 tccgattcac tacctgctaa tggcgcaatc ccaccgccgc cgaccacttc accctcgtac
     2281 tcaaccaccc aatatgcatg acccggctga ctatacactt gatacagttc gtcaagattc
     2341 ggatcggcga cggtgtagcc tttatcagcg gtaagaccgt attcggcgga tacctgacga
     2401 atgacgcggg caatagcagg attatcctgt agcgtcaggc gacgcattac aggtgattgc
     2461 ggcgcaatgt tattcatagt ttaacccaat aaaaataaag taattataca tttgtttaat
     2521 accactctct tcttacgtgc gcaagcatct tataaagcaa taaagttttt gccagcctat
     2581 tactgataag agtattgtaa cgtggcagaa cattttactg tctgtatata taaattatat
     2641 caatggattt tttaattcag ggaattttta tggctcaagt tattaatgaa atggatgttc
     2701 cgtcccattc gtttgttttt catggtacag gtgagagata ttttcttatt tgtgtggtga
     2761 atgtgttgtt aacgattata acgctaggta tctatttacc atgggcatta atgaaatgta
     2821 agcgttatct ctatgctaat atggaagtta acggacaacg
//
LOCUS       DADKRT010000292         2792 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.297, whole genome shotgun sequence.
ACCESSION   DADKRT010000292 DADKRT010000000
VERSION     DADKRT010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.297"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(34..2707)
                     /locus_tag="JQ356_004160"
                     /pseudo
     CDS             complement(34..2707)
                     /locus_tag="JQ356_004160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT          653 a          699 c          675 g          765 t
ORIGIN      
        1 gctgcttaaa aaaagaacaa atggtagtgt ccgctattgc cagtacacct cattcacata
       61 gacattcagc tggctgttgc ctgcggtgat gtcatacccc agtatcatgc tggcacgccc
      121 cagcagcgat tcgtagtgat tcagatgtat attgaggcca ttactcgcct tcatagccat
      181 ctcattctgg tggctgtatg taagctgggt ttgcggctct atatagaacc cataaccagt
      241 aggggacagg ttgaacctct gcccggcttc tagggagatg ctcattccat tcgcagtgcc
      301 gttggcgtta acgccgttgt tatgactgtc cagtacgtgg aaactatttt tctggcgcga
      361 tgcttttata acgagatcgc tgtaaaaacc gttttgtgcc atgtaactgg cgtacattcc
      421 catgtagtct gaacgtgcgg taccgtcgcc tccgctatag tccggcgatg catgtgttga
      481 gccaatatac agaccgacat acaacggcat ttcatcagag agacgtttat ccccaccaaa
      541 ctggataccg ctgtaaccca tgtcaaagcc gctcagtttg ccactggcaa aggagtccag
      601 gcttccccca taactgcgca accagatatt accgtcttta ctctgatttc gcaggtcacc
      661 catccgttgc atcagcgtac ggttttcaac atagttcaat aagtaaccga cattgagata
      721 attgccgcca gcatctgcgg tcgtggtggg tttaggcgtg ggagcgggtt caggcgtagg
      781 atcggggttg actatgggag gctgagcggg agctggtgtg ggttcaggat taggagtcgg
      841 ttccggaact gtcccggaag cgtaaagctc ccagttagtg ccatttttac gcacatcgta
      901 cagatatccc ccccaactca acctgagaag acgcgctgaa cgaggccgcg ccgtcagtgg
      961 tttttaccac tgtcagaact tcatttcccg ttgtggcctc gctgccctgg ttgcggatag
     1021 ccaatacgtg attaccagca ctactcccgc tgatattcaa taaatcccct ttattattaa
     1081 cgccattacc ctcgccaaca acatcagcac gcataataaa ggtactgtta ccgctcaggt
     1141 tctctacgtt taatgtggca aatgtgccgg cagttgaccc gtggctggca aaatcgacag
     1201 ttgaatggct cagcgccagc gtgtcgagat tagaattact tgttacgttc cagacgctgt
     1261 tattcattgc aacgtccagt tttccgccat tgacattatc gctgagggag gaacctgtcc
     1321 aaaccgaccc agggtgcata tccagattga ttagcccacc tttggaaaaa atgctaccgt
     1381 tgataagcat acgacccgag gcgttgatgc ggctggcggc ataaccatcg tcatgttgcg
     1441 ttgcaatggc catcttgtcg ggtgtactca tatcaatgac cagatcgctc gtgaggtcga
     1501 tctggctgtt ggtcatggca taaattcccc tggctcctgc cgcgccggtg atagccaaac
     1561 tgtctccggt tattctaccg ccgctgagcg cccacaaacc cagcgccaga ctgccattac
     1621 gatcaactgt aatatcggta ttttgcatgt tgacaacagc cgttgccgtc tgggccgagg
     1681 caccataaga accgccggaa aagatgctgt ttcgttgcgc tgccgtgcca gaaaaattga
     1741 ttgtcgcgtc tgaaccactg gtgacgaggc caccgccctg cgcggaagaa atatggctat
     1801 ctgcaccgat agtggttgta ccaccacgaa cttcgacgcc attggccgcg gctccagtta
     1861 catcaacagt gagtgcattc gcgctaacct ggccaaagct ccagaggccg tgtgcattat
     1921 cgccattggt tttaatggaa ctgtttgttc cgagatcgac aacagagttt ttctgtacgt
     1981 ttatccccat ggcgctgtag ccctgaacat cgattgtcag gtctgtagcc gtaaaacgcg
     2041 cagcaccatt ggcgttattg ccgttgagac caccgatata aacacctgta cttccatcgg
     2101 tcgtgatttt acttccgctt ccaagatcga cactggtgcc atagtcattg atggttaggc
     2161 ctataccgtt cgagttttca atggtgaatt gagtggctgt tagtgttgag ctatgcccaa
     2221 taatgatgcc gtcatcgtta ctcttaatgg tgctgcctgt gcctaagtca gcatgggtat
     2281 agtcaccaat taagttaatg ccgatggcag aggtttgacc aacaacatct actgtgagtc
     2341 ggttagctgt cagggagctg tttttgccct gaataatgat tccttttgca tatccagagg
     2401 cgtcgttgac attgacggtg acatcattac ccaggttgat attgccaggc gtgtttcctg
     2461 ctggggtcat tacaccatag aggtttcctg atggatcggc ggtatctcct gtaattctgt
     2521 caccatcatt aatagtaata ttggtgccat attgacttcc tgtatcagca gctatcagca
     2581 ggggggaaaa gataattgca ttcaaaccaa tagcgccaaa ttttatcagt tgaattgagg
     2641 gcgaacggat ttttaattca gcgagacgat ctgctttggt attcccattg tgttgtttga
     2701 tgcccatacc actcctatat agtacccaga ctatgggtct atggattttg tcattttgtt
     2761 taaatcaatg aataatatcc tcttatcatc at
//
LOCUS       DADKRT010000293         2783 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.298, whole genome shotgun sequence.
ACCESSION   DADKRT010000293 DADKRT010000000
VERSION     DADKRT010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.298"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..579
                     /locus_tag="JQ356_004161"
     CDS             <1..579
                     /locus_tag="JQ356_004161"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624050.1"
                     /translation="KKNNVPMIQNNGNLQPFSMGNLPSIAKTFPMEIHTTILQQLNPL
                     EHISNAISRICYYKEQCKALELESLKIKEQASFMHLKIDTNFKKAMYELETRRKSNEL
                     KLIAAANDFKQISITKSDLIKEISKLVSSICSNDVSLESKKAMNDTLIIMKGMLSDQR
                     SESYEKFKSLLSSIDSSYNDVLLIEDHQDNYV"
     gene            572..1153
                     /locus_tag="JQ356_004162"
     CDS             572..1153
                     /locus_tag="JQ356_004162"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624051.1"
                     /translation="MFNIILGVAAVGVGLYILNELDDRAGEEKKRWENQRESVCKSIE
                     EHKRYIEQHVEYVQSMYDFHQLVDLHYSCMKVANEAYKLLNDAKKSMGAIYDAINKLK
                     AHRSKLFNDKKESDDYEKKKEIQAEINMIKEIIDGLYSELDLIKKDKEHFYQELKAFN
                     LKTSSIKYRIRDNTGYKGFDWYNRLQERTLLRR"
     gene            2133..2609
                     /locus_tag="JQ356_004163"
     CDS             2133..2609
                     /locus_tag="JQ356_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000469298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY4624052.1"
                     /translation="MFIDSEKRLKQLSDEAKKSTEDLEEAKKNSRFTQVSPKGWERVR
                     ELLKDSQGISALKLYSFLAEHIDPTCGAVVADQQFLAEKLGVSRSTIIRWLNYLESKN
                     ALVRIPVAGKVCAYALDPHEVWKGYNTTKNHAAFVTKTLVNKDGDIQRRIMAMFSN"
BASE COUNT          906 a          544 c          624 g          709 t
ORIGIN      
        1 aaaaaaaata acgtgccaat gatacaaaat aatggaaatc tccaaccatt tagcatgggt
       61 aatttaccat ctattgctaa aacattccca atggaaatcc atacaactat acttcaacag
      121 cttaacccat tggagcatat atccaatgct ataagtagga tttgttacta taaagaacag
      181 tgtaaagcac ttgagcttga gtcactaaaa ataaaagaac aagccagttt tatgcacctt
      241 aaaatagata ctaattttaa aaaggcaatg tatgagctag aaacaagaag aaagagtaat
      301 gagttgaagt tgatagctgc tgcaaatgat tttaagcaaa tatcaataac aaaatcagac
      361 ttaattaaag agatatcaaa gcttgtttca agcatatgta gcaatgacgt ttcgttggaa
      421 agtaaaaagg cgatgaacga tactcttatc attatgaaag gcatgctcag tgatcaacgg
      481 tctgagtcat atgaaaaatt caaatctttg ttaagtagta ttgattctag ttacaatgat
      541 gtgttgttga tagaggatca tcaggataat tatgtttaat atcatactcg gagttgctgc
      601 tgtaggtgtt ggtttatata tcttgaacga acttgatgat cgcgccggag aagaaaaaaa
      661 gcgatgggaa aatcaacgag aatcagtatg taaaagcatt gaagaacata agagatatat
      721 agaacaacat gtcgaatatg ttcaatcaat gtatgatttt catcagttag ttgaccttca
      781 ttattcatgt atgaaagtgg caaatgaagc atataaactt cttaatgatg ctaaaaaatc
      841 aatgggcgct atttatgatg ctatcaataa actcaaagct caccgctcta aattatttaa
      901 tgataaaaaa gaaagcgatg attatgaaaa gaaaaaagaa atacaagcag aaataaacat
      961 gatcaaagaa atcatagatg gcctatactc tgaattagat ttaattaaaa aggataaaga
     1021 acatttttat caggaattaa aagcttttaa cttaaaaact agcagcatta aatacagaat
     1081 tagagacaat accggatata aaggctttga ttggtataat cggttacaag aacgaacttt
     1141 acttcgacgt tagttttgca ctgaaactat atcagataac aatcctccac ggttccggca
     1201 gcgccttgag cgcaaccgga aaccgtctgg ggagaacccc agacccccat cgctgcaaca
     1261 tcgacggtct gcaccacctg ccaaccgagt aactgcctgt tccgtgcgaa tgggctttgc
     1321 agggggctgg cgcggttcct ggcgacctga aagcccctgg ttaggggtat cggcgcgcct
     1381 gacctcctga gagcctctgt aacgcatttt cgcgcctccc atgccctggc gggcatttaa
     1441 aacccgtttc gtgcgtctga gagcgtttga agggctatct gacgactcat ccccgaaaga
     1501 acaacgacgg aatcaccgac aacatgcgag aggtggcacc gctcgccgca gccccagcga
     1561 ccgaacgtta gtgagcgagt gggcgaggaa gcggaagaga accggtagtt agattgagca
     1621 cgtacgcact gatgggtgtc ggggcgcagc cctgaccaga tggcaaacgg aacatcgtcg
     1681 tgggtgacgg tattacattt gcacatcctg tcccgatttt tgaggcattt tagccttcat
     1741 ccccctttta gtggtgaacg gacggcaaaa acatgatgga actgttgaac gtggagagcg
     1801 cgaaatcgga caaaaatcac ggttgacgag gcttgcagag gagtaagcca gtatacactc
     1861 cgctatcgct acgagactgg gtcagggctg cgccccgaca cctccaaagg gtgttgcgtt
     1921 gagcgcaaca cccttgccta gaatagatct tttacgccga tttgtaagtt gttgtttttt
     1981 tagtgtgttt tttgtttacc tgttgcatcc agggtgacac aacgttgtcg catcctggat
     2041 gcgacaacac gcaacaaggt gttgcacaga tgtatcatga tggcttagat ttgaaccaac
     2101 gttagtgcat gggattttca gagggaaaaa tcatgtttat tgattcagaa aaacggctga
     2161 aacaactttc agatgaggca aagaaaagca ccgaggatct cgaagaagca aagaagaatt
     2221 caaggtttac acaggtatcc ccaaaaggtt gggaacgcgt tcgagagctg ctgaaggata
     2281 gccaaggcat atcagcactg aagctgtact catttttagc ggagcatatc gatccaacgt
     2341 gtggcgctgt cgttgcggat cagcaattcc tagctgaaaa acttggagtt agcagaagca
     2401 caattattcg gtggctcaat tacttagaat caaaaaatgc attagttaga atccccgttg
     2461 ctggtaaggt ttgtgcgtat gccctcgatc cacatgaagt ctggaaggga tacaacacta
     2521 cgaaaaacca tgcagcgttt gtcactaaaa cactggtcaa caaagacggt gatattcagc
     2581 gccgaatcat ggccatgttt tcaaattgag ccagcggcag gcggacaatc aggggctacg
     2641 tgttaacgtt ttgaccatga ttgtctatcc tgcattgctc ttttaccacc tagacagcac
     2701 catagtgata agataaacat gctcaaacgt tttatgtaac attagaaaaa ttcagttaat
     2761 taaaaaaggt tttctaaatg agc
//
LOCUS       DADKRT010000294         2741 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.299, whole genome shotgun sequence.
ACCESSION   DADKRT010000294 DADKRT010000000
VERSION     DADKRT010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.299"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(230..2608)
                     /gene="ppsA"
                     /locus_tag="JQ356_004164"
     CDS             complement(230..2608)
                     /gene="ppsA"
                     /locus_tag="JQ356_004164"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HAY4624053.1"
                     /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
                     VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQP
                     ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
                     KHVFASLFNGRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
                     VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG
                     KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ
                     ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL
                     VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV
                     TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVG
                     LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL
                     GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL
                     ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
                     SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
                     AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
BASE COUNT          654 a          761 c          683 g          643 t
ORIGIN      
        1 aagaggtggt ggcttttttt agccgtaaac gggtcgcaaa atataaatat cctgaacata
       61 tcgtggtaat cgaaaaacta ccgcgcactg cctcaggtaa aatacaaaag tttttgttaa
      121 gaaaagatat tatgcggcga ttaacgcagg atgtctgtga agagattgaa taagtttcat
      181 cttcggggat cacataaacc cggcgacaaa acgccgccgg gtatttattt tatttcttca
      241 gttcagccag gcttaaccag gtttgcacca cggtgtccgg attcagagac aggctatcga
      301 tcccctcttc catcaaccat gcggcaaaat cttcgtggtc ggacggaccc tgaccgcaaa
      361 tcccgacata tttgccctgt ttcttcgcgg cacggatagc catcgacagc aatgctttca
      421 ccgcatcgtt gcgctcatcg aacagttcag acaccacgcc ggagtcacga tccagaccga
      481 gcgccaactg cgtcatgtcg tttgagccaa ttgagaagcc gtcgaaatat tcgaggaact
      541 gctcggccag caaggcgttg gacgggattt cacacatcat gatgattttc agcccgttct
      601 caccacgctt cagcccctga cgcgccagtt cttcaaccac cgctttcgcc tggtctacgg
      661 tacgcacgaa cgggatcatg atctcaacgt tggtcagccc catgtcgttg cgcacacgtt
      721 tcactgcttc acactccagc gcgaagcagt cgcggaagct gtcggaaaca tagcggcccg
      781 cgccacggaa gccgagcatc gggttctctt catctggctc gtaacgctca ccaccgacca
      841 ggttggcata ttcgttcgat ttaaaatcag agagacggac aatgacgcgc ttcggataaa
      901 acgcggcacc cagcgtcgcg atcccttcag tcagacgacc aacgtaaaat tcacgcggag
      961 aatcaaaacc tttcatcatc tcgcggattt cgttttgcaa ctgcggttcc tgatcgtcaa
     1021 actcaagcag tgcgcgtggg tggacgccaa tcatacggtt gatgataaat tccagacgcg
     1081 caagtcccac gccttcgttc ggcagacagg cgaagtcgaa agctcgatcc gggttaccga
     1141 cgttcatcat cactttcaac ggcagatccg gcatggtttc tacgctggag cttttcacgc
     1201 taaattccag caactccgca tagacgtaac cggtatcacc ttcggcacaa gaaacagtga
     1261 cgttctcacc gtctttcatc cgttctgttg catcaccaca gcccacgacc gccggaatac
     1321 ccagttcacg agcgatgatc gccgcgtgac aggtacgacc gccacggttg gtgactatgg
     1381 cagatgcttt cttcatgatc ggttcccagt ccgggtcggt catgtcagtg accagcacgt
     1441 caccaggttc gatgcggttc atttcgctga tgtcatggat gactttcacc ggacccgcac
     1501 cgatgcgatg accgatagca cggccttcgg cgataatctt accctgtgaa tgcagcgtat
     1561 aacgctccat gacctgaccg cgtgagcgca cggtttccgg acgcgcctgc acaatgaaca
     1621 gtttgccggt gtggccatct ttcgcccact caatatccat cgggcgaccg tagtgtttct
     1681 caatttgtac ggcctgtttt gccagttcct gcacttcttc gttggtcagc gagaagatgt
     1741 cacgctgttc ctgcggtacg tcttcgattt taacctgctt gccgtgctcc tgggtcggcg
     1801 cgtaaaccat gcggattttt ttcgacccca tggtgcggcg cacgatagcc gggcgattcg
     1861 ccgccagtgt cggtttatgc acgtaaaact catccgggtt aaccgccccc tgcacgacca
     1921 tctcaccaag gccccatgcg gaagtgataa acaccacctg gtcaaagccg gattcggtat
     1981 caatggagaa catcacgcca gaagatgcga ggtcggagcg caccatccgc tgaacaccgg
     2041 cggagagcgc cacgccacgg tgatcgtaac cctggtgcac acgataagag atggcgcgac
     2101 cgttaaacag agaagcaaat acatgtttca ctgccacgag aacggcgtca aacccctgaa
     2161 cgttgaggaa ggtttcctgc tgaccggcaa aggaagcgtc cggcatatct tctgcggtgg
     2221 cggaggagcg caccgcaaaa gaggcgtttt cgtcatcggc ggaaagctga gcataggctt
     2281 cgcggatggc gttttccagc tcaggctgga agggagtgtc gataatccac tggcggattt
     2341 gcgcgcccgc tttcgcaagc tgagtaacat cgtcaatatc cgttttatcc agcagttcat
     2401 aaatgcgctg gtttacgccg ctttggtcca gaaactggtt aaacgcgtcg gcggttgtgg
     2461 cgaaaccatt cggaacggaa acgcccattc cggaaaggtt agtaatcatt tcacccaggg
     2521 aggcattttt gcccccaacc ctgtctacat cattcatgcc gagttggttg taccaaagca
     2581 ccagcggtga cgagccattg ttggacatcg aacaatcctt ttgtgataaa tgaacggttt
     2641 gagaaacaca tttctgcgca tttatctttg catatttaac cggatgaaaa aaacggtgaa
     2701 tcgttcaagc aaatatattt ttttactttt taagactgat c
//
LOCUS       DADKRT010000295         2557 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.300, whole genome shotgun sequence.
ACCESSION   DADKRT010000295 DADKRT010000000
VERSION     DADKRT010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.300"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..101)
                     /locus_tag="JQ356_004165"
     CDS             complement(<1..101)
                     /locus_tag="JQ356_004165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HAY4624054.1"
                     /translation="MLNTVKISSCELINADCLEFIRSLPENSVDLIVT"
     gene            complement(252..449)
                     /locus_tag="JQ356_004166"
     CDS             complement(252..449)
                     /locus_tag="JQ356_004166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309806.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrmB family transcriptional regulator"
                     /protein_id="HAY4624055.1"
                     /translation="MLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLIL
                     TQLVMAGLADYQFGCYRRLPQ"
     gene            complement(676..1497)
                     /locus_tag="JQ356_004167"
     CDS             complement(676..1497)
                     /locus_tag="JQ356_004167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein"
                     /protein_id="HAY4624056.1"
                     /translation="MKLEDLPKYYSPKSPGLTDASASTSKDALSITDVMAAQGMTQNR
                     AEMGFSAFLGKMGISMNDRERATELLTEYALSRCDRVAALRKLPAEIKPVVMRIMASY
                     AFEDYARSAASKKQCPCCYGEKFIESVVFTNKVQYPDGKPPVWAKCTKGVYPSYWEEW
                     KKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGC
                     ERLPSTEAFNAICKVTSAITLDTWKKSVKRFYDTLVVRFDIEEAWAERQLKRVTR"
     gene            complement(1494..1874)
                     /locus_tag="JQ356_004168"
     CDS             complement(1494..1874)
                     /locus_tag="JQ356_004168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000140009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HAY4624057.1"
                     /translation="MTERIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVR
                     QQRLKLSLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLMDDEQFDEINIVR
                     AQPVSGGRLGVKIYPIMLEGQVKK"
     gene            complement(1875..>2557)
                     /locus_tag="JQ356_004169"
     CDS             complement(1875..>2557)
                     /locus_tag="JQ356_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707877.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HAY4624058.1"
                     /translation="RDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERELSLAELSWW
                     AVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLAPLPH
                     AHQQNPPQEKTVVSIAVDPESPAQYLQRQKSQREEMPVYTRWVKTQKCMTCGNQADDP
                     HHIIGHGLGGMGTKADDLFVIPLCRKCHSELHAGVKDFEEKHGSQLLLLIRFLMHARN
                     SGVLKWKA"
BASE COUNT          608 a          723 c          555 g          671 t
ORIGIN      
        1 gtgactatca ggtcaacaga attttcgggt aacgaccgga taaattccag gcagtcggcg
       61 ttgattaact cacaactgga tatttttaca gtattaagca tggatcatta agcctgtctc
      121 tgataggctc attctgcttt tgcgcaaagc agtgggcctg aggtttgctt gtgaacccaa
      181 cgcatgagca gatggctggt gggtgcccct aacacccacc agccgcccat ttaccacaaa
      241 taaaaaagcc ttcactgcgg aaggcgtctg taacaaccga actgatagtc tgccagaccc
      301 gccataacca gctgggtcag tattaactgg cagcgttcgc gtgaaaggta agtattctgt
      361 gcaatctccc cgactgtcgc cggttcggta acgcttaatt cattaaacac cactctggcg
      421 gtttctgtca tatcctgctg ttttagcatg tctttttccc ttttccggtt aacgtgacac
      481 accaataact cttgtcgaaa aagccagcaa gctgaaagac aggtattcac cgccaccagc
      541 gcgtttactg tactgacgcg atttcagtca taaaaaaccc gccaggcggc ggggtgtaaa
      601 aaatcttcta acgtcaggca taaaacgccc atcgttagag caaatttacc acagattcgg
      661 gaaaaatcaa caacactatc gcgttaccct ctttaactgc cgctccgccc atgcctcttc
      721 aatgtcaaac cgaaccacca acgtatcgta aaagcgtttc actgattttt tccacgtatc
      781 aagcgtgata gcactcgtca ctttgcatat ggcattaaat gcctccgttg atggtagtct
      841 ttcacagcca cgaccaccac aacgctggca gtctctgata acaggcatac cacgttttac
      901 cgactcttca cgatgaatgg cgacaccacg cccacggcaa tccttacagg cggtggaaac
      961 ctcacccttt ccgccacact ccggacaggc aacttttacc acctccctga cttttttcca
     1021 ttcttcccag taagacggat acacaccttt cgtacacttt gcccataccg gcggcttacc
     1081 atccggatac tggaccttgt ttgtaaaaac tacgctttca ataaattttt ccccatagca
     1141 acaagggcac tgctttttac tcgctgcgct gcgggcataa tcctcaaaag cgtacgaagc
     1201 cataatgcgc atcactaccg gttttatttc tgccgggagt tttcttaacg ccgccacgcg
     1261 atcacaccga ctgagtgcat attctgtcag caattctgtt gcccgctctc tgtcattcat
     1321 actaatgccc attttcccaa ggaacgcaga aaaccccatc tcagcccgat tctgtgtcat
     1381 gccctgcgcg gccatcacat cagtgatact cagcgcatct ttcgacgttg aggccgatgc
     1441 atcagtcagg ccgggggatt ttggggagta gtatttcggt aaatcttcca gtttcatttt
     1501 ttgacctgcc cttcaagcat tatggggtaa atcttcaccc ccagacgtcc accagatact
     1561 ggctgagcac gaacgatatt gatttcatca aactgctcat cgtccattag caaccccgca
     1621 tgcgtcagcg catccagcgg cgctttcaga atattgtcca ggtcacggcg gcgcttatcc
     1681 ggtggttctg caataatttt tattgccaac cttccggaca ggcttaattt cagccgctgc
     1741 tggcgaacaa taagcgccac tgcccggcga taacgctccc cggcttttga tacaaaatat
     1801 gtgctgccac gacgacgcca gtaagtgttc accgttggcg ggtaaggcaa aacaaattct
     1861 atgcgttcag tcatttatgc tttccacttc agaacacccg aatttctcgc gtgcattaaa
     1921 aaacgaatca gcaacaacag ctggctgccg tgtttttctt caaaatcttt taccccggcg
     1981 tgtagttcgc tatggcattt acggcacagc ggaataacaa acaaatcatc agcctttgtt
     2041 cccatccctc ccagtccatg accaatgatg tgatgcggat catctgcctg attgccacac
     2101 gtcatgcatt tctgcgtttt tacccaacgc gtgtatacag gcatctcttc ccgttgtgat
     2161 ttctggcgct ggagatactg agccggtgac tccggatcaa cggcaatgct gaccaccgtc
     2221 ttttcctgtg gcgggttttg ctggtgggcg tgaggcagcg gcgcaagatt ttttgtgcgc
     2281 tgcttcagta tgctggtggc ggtctgctct cccggtacga tgtcgctttc acggtacatt
     2341 gagcggattt tttccgcacg caaccccagc gaacgacgta atactgcttc cggtagcgcg
     2401 tccgccacct gattgcggac cgcccaccag gataattcag ccagagataa ttcacgctcc
     2461 tgcgtaccgc ttattgcgtg accgatgacg tcaatcatcc atgctgacag gttttgatga
     2521 gcaagttgct cgagtgattc ggatgtctgg tcacgca
//
LOCUS       DADKRT010000296         2451 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.301, whole genome shotgun sequence.
ACCESSION   DADKRT010000296 DADKRT010000000
VERSION     DADKRT010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.301"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            545..1084
                     /locus_tag="JQ356_004170"
     CDS             545..1084
                     /locus_tag="JQ356_004170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015870862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY4624059.1"
                     /translation="MSHGGWKEISHPQTLFTRQKGDGWTVVPKNLRIDFYTKDNDFTK
                     GLSVLSEVNKRHTEAQKGLTPSLNISKDDLKVLANARNIPQSKLEEEMMSQAIYRKEY
                     ATSNEKIKNYALYYHEQAQNIIQRHQDGLGNKNIDIAFITDKNHKKHLSDIFKVINES
                     GVKYDVIHFGACRVNREEK"
     gene            complement(1310..1633)
                     /locus_tag="JQ356_004171"
     CDS             complement(1310..1633)
                     /locus_tag="JQ356_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nikA protein"
                     /protein_id="HAY4624060.1"
                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLR
                     AAALGKNVNSLTDDRVLKEVMRLGALQKKLFIDGKRIGDREYAEVLIAITEYHRALLS
                     RLMAD"
     gene            1917..2111
                     /locus_tag="JQ356_004172"
     CDS             1917..2111
                     /locus_tag="JQ356_004172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HAY4624061.1"
                     /translation="MNKQQQAVLNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHEL
                     AEELQNSIQTRFEVENSTER"
BASE COUNT          835 a          577 c          511 g          528 t
ORIGIN      
        1 ttatcgccac tggcagcagc cactgataac cgaattagag gagtaagact tgaagtcatg
       61 cgcctgttaa ggctaaactg aaagaacaag ttttggtgac tgcgctcctc caagccagtt
      121 acctcggctc aaagagttgg tatctctgag aaccttcgaa aaaccgcctt gcagggcggt
      181 tttttcgttt acaggcagta gattacgcgc agaaaaaaag gatctcaaga agaaccttta
      241 attttttttc acacttggta tcctacttta acccataaaa taaatactta caccaacacg
      301 cccttaaaca aaagaaaaaa aaacaataaa aaacaccgca aaaatggatt gttaacaaat
      361 gaaaatactc aattcgaatc tcataacaaa catatcatca acaataagaa atcaccttct
      421 aacatcatcc aaaaatataa aaacacaccc atcaccaaac atggacgtaa caagtcatcg
      481 tcgtttattc cagaaagacg gaataggatt gagccaaaca ggaaaagcaa cacaacttgt
      541 cattatgtcg catggtggat ggaaagagat ctcccatcca caaacactat tcacgcgtca
      601 aaaaggcgat ggatggactg tagtccccaa aaacctaaga attgattttt atacaaaaga
      661 caacgacttc acaaagggac taagcgttct ttcagaggta aacaaacgcc atactgaagc
      721 tcaaaaaggg ttaacaccat cactaaacat aagcaaagat gacctaaaag ttctagcgaa
      781 cgcgcgcaat atacctcaat caaaattaga agaagaaatg atgtcacaag ccatatatag
      841 aaaagaatac gcaacaagta atgagaagat aaaaaactat gctctatatt accatgaaca
      901 agcccaaaat attatacaaa gacatcaaga tggcttagga aacaaaaata ttgatatagc
      961 atttataact gataaaaatc ataagaagca cctttctgac atatttaaag taataaatga
     1021 atcaggagta aaatatgatg taattcactt tggcgcttgc cgagtaaata gagaggagaa
     1081 ataatcatca tttaccataa tcccttaatt gtacgcacca ctgaaacgcg ctgaacgcga
     1141 ttctgacgca gacaccacaa aaatagatgt tttaccccgg aaaaacagga aggatgcgtc
     1201 aggatcgttt tcagctcgct gcatagctat gcatgaaagc gaatggagat cactttggga
     1261 gcttaccgtg ttcataccgt ctgttttcaa cagttttctc cccgggaagc taatctgcca
     1321 taagcctgga taacagggca cggtgatact ccgtaatagc gatcagcacc tccgcatact
     1381 ccctgtcccc gatacgcttg ccgtcgataa agagtttttt ctgtaacgcc cccagtctca
     1441 taacttcttt cagtacccga tcatcagtca gtgagttaac gttcttaccg agagctgccg
     1501 cccgtaaaaa accggaaacg gtcttgccgc attcagcagc cctttttctg atttcctggt
     1561 cttcttctgc cgtcagacga acagggcgac tgatagcccg cctgcgcgta ttacttccac
     1621 ttcgttttgt cataaaacat ggctccgtat ctgacatggg tgtcggggca aagccctgac
     1681 cagggcaatt gtaatagcgt gcatgtatgc gcggtataac aattgcacat cctgtcctgt
     1741 cagcaagctc gaattaccga caaaggcacg gcagtttttt ggcagttaca gtgttgtctg
     1801 acagaaatgc ccgtcaaaaa gccaggcggc agaatagcgg cagcaaaaca gtcgaaaagt
     1861 ggtacgcgat ataatcacat aacgcagatg acagacagaa cggagaaaac gaaaagatga
     1921 acaagcagca gcaagccgta ctcaacatgg cgggattcat aaaaagccag agcctgacgc
     1981 tgctcgaaaa actggacgca ctcgatgctg acgagcaggc caccatgtgt gagaaactac
     2041 acgaactcgc agaagaactc cagaacagca tacagacacg ctttgaagta gaaaatagca
     2101 cagagagata acgctcagga caggatgtcg aacggcacaa cagagcgtaa ggagaaaatg
     2161 tcacataagg cgctcttccg cttcctcgct cactgactcg ctacgctcgg tcgttcgact
     2221 gcggcgagcg gtatcagctc actcaaaggc ggtaatgcgg ttatccacag aatcagggga
     2281 taacgccgga aagaacatgt gagcaaaaag ccgaaggcag ggacaaaggc cgcgcaggtg
     2341 gcgtttttcc ataggctccg cccccctgac gagcatcaca aaaatcgacg ctcaagtcag
     2401 aggtggcgaa acccgacagg actataaaga taccaggcgt ttccccctgg a
//
LOCUS       DADKRT010000297         2440 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.302, whole genome shotgun sequence.
ACCESSION   DADKRT010000297 DADKRT010000000
VERSION     DADKRT010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.302"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(80..871)
                     /gene="kdgR"
                     /locus_tag="JQ356_004173"
     CDS             complement(80..871)
                     /gene="kdgR"
                     /locus_tag="JQ356_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HAY4624062.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
     gene            1048..2421
                     /locus_tag="JQ356_004174"
     CDS             1048..2421
                     /locus_tag="JQ356_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4624063.1"
                     /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIAT
                     DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD
                     SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA
                     AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL
                     ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT
                     SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG
                     LLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE
                     RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI
                     TQPRSRA"
BASE COUNT          516 a          645 c          572 g          707 t
ORIGIN      
        1 taacgcacct tcaactttat ttttctcatg ctaaataaag aacctgtctg tttgatattc
       61 cgacaggttc ttactctcat cagaacggat agtcgtgata acccatttgg gcagaaattt
      121 tgcgcgctgc ggtatgcaac attgcgacat attcctgtaa acgctcttca gagaaacgca
      181 acgtcgggaa ggagatgctc aaaccggcaa tgaccacgcc aaagcgatca aataccggta
      241 ccgcaatgca tcgcagccct tcttcctgct cttcgttatc ttcgccatac ccctgctcgc
      301 gcacctggtc cagaacgggt aataacgctt ctgtactggt gatggtccgc tcggtactgc
      361 gtttatactc cacgccctca agaatttgct tcacttcatc gcgatcgcgc catgccagca
      421 gtaccttacc aatcgcggtg ctgtacagcg gattacgacg cccaatccgt gaatacatgc
      481 gcaaattgta catagagtca attttgtgaa tgtaaacaat actgtcttcg tccagtgcgc
      541 cgaggtggat agtttctttg gtcaggcggg agatctcacg catctggata tctgcgctac
      601 gaattaaatc gacgttttgt aacgcgcgag cgcccagttc aaacaatttc agggtcaggg
      661 aatatttctc cgactcccct tcctgcgcca cataacctaa ggttttcatg gtctgtaaaa
      721 agcgataaac ggtgcttttt gacatcatga cgcgctgcga cagctcggtt atccctattt
      781 cgcgctcttc acccagcgcc tgcaaaatgc caaaaacttt tagcacggaa gatacagaat
      841 caggctgttt atccagatct gcgttagcca tttatcacct cattgcgagt gttttataaa
      901 aatcagaact gttttttatt ataatttcgc accagggggg tcgcaatcca tcttttgccg
      961 gttagttaca attctgcgac atccaccgtg aatatcagtg ctagaatcat acccctgttg
     1021 attattcacc aaagatataa aattcctatg ccaaaagttc aggccgacgg cctgccattg
     1081 ccccagcgat acggtgcgat attaaccatt gtgattggta tttcgatggc tgtccttgac
     1141 ggcgcaatcg ccaacgtcgc cctgccaaca atcgccacgg accttcatgc cacgccagcc
     1201 agttccatct gggtagtgaa cgcctatcaa atcgccattg tcatctccct gctctcgttt
     1261 tcgtttctgg gcgatatgtt tggctatcga cgtatttata aatgcggtct ggtcgttttt
     1321 ctgttgtctt cactgttctg cgccctttct gattcgctgc aaatgctcac ccttgcgcgt
     1381 gtcatacaag gtttcggcgg tgcagcgttg atgagcgtta ataccgcact tatccgcctg
     1441 atctatccac aacgttttct ggggagaggg atgggcataa actcgtttat tgttgccgtc
     1501 tcttctgctg ccgggccgac aattgctgca gcaatcctct ccatcgcatc ctggaaatgg
     1561 ttatttttaa tcaacgtacc gttaggtatt atcgccctgc ttctggcgat gcgttttctg
     1621 ccacccaatg gttctcgcgc cagtaaaccc cgtttcgacc tgcccagcgc cgtgatgaac
     1681 gcgttaacct tcggcctgct tatcactgcg ttgagtggtt tcgctcaggg gcaatcgctg
     1741 acgttaattg ctgcggaact ggtggtaatg gttgttgttg gtattttctt tattcgccgc
     1801 cagctttctc ttcccgtacc gctgctaccg gtggatttac tgcgtatccc gctgttttca
     1861 ctttctattt gcacatctgt ttgctctttc tgcgcacaaa tgctggcaat ggtttccctg
     1921 cccttttacc tgcaaaccgt gctcgggcgt agtgaagtcg aaacaggttt acttctgaca
     1981 ccgtggccgt tagcaacgat ggtgatggct ccgttggcag gctatttgat tgaacgcgta
     2041 catgcaggat tgctgggtgc tctagggttg ttcatcatgg ctgcggggct tttttccctg
     2101 gttctgctgc ccgcgtcacc tgcggatatc aatattatct ggccgatgat cttatgtggc
     2161 gctggatttg gcttgttcca gtcacccaat aaccacacca ttattacctc cgctcctcgc
     2221 gaacgtagcg gtggagccag tggcatgtta ggaacggctc gtctactggg tcagagtagc
     2281 ggcgcggcac tggtggcgct gatgctaaat cagttcggtg ataatggtac gcacgtttcg
     2341 ctgatggctg cggctattct ggcagtgatt gctgcctgtg tcagtggttt acgtatcact
     2401 cagccacgat ccagggcata aaaaaagcgc gtcgatcagg
//
LOCUS       DADKRT010000298         2411 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.303, whole genome shotgun sequence.
ACCESSION   DADKRT010000298 DADKRT010000000
VERSION     DADKRT010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.303"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..447
                     /gene="yeeE"
                     /locus_tag="JQ356_004175"
     CDS             <1..447
                     /gene="yeeE"
                     /locus_tag="JQ356_004175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HAY4624064.1"
                     /translation="VLIGLIALLAWPLSEATGRMFGLGITSPTANILQFLVAGDVKYI
                     NWGVFLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGN
                     GLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN"
     gene            461..688
                     /locus_tag="JQ356_004176"
     CDS             461..688
                     /locus_tag="JQ356_004176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HAY4624065.1"
                     /translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
                     AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
     gene            complement(731..2155)
                     /gene="sbcB"
                     /locus_tag="JQ356_004177"
     CDS             complement(731..2155)
                     /gene="sbcB"
                     /locus_tag="JQ356_004177"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HAY4624066.1"
                     /translation="MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGE
                     PEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYN
                     NVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGL
                     PSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMA
                     LIDVPQMPPLVHVSGMFGAWSGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSD
                     TLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLK
                     ILRENPQVREKVVAIFAEAEPFTPTDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPA
                     LDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQMLV
                     QQYADDKEKVALLKALWQYAEEIV"
BASE COUNT          581 a          575 c          620 g          635 t
ORIGIN      
        1 gtactcatcg gtttgattgc gcttttagcc tggcccctga gtgaagcaac cggacgcatg
       61 tttgggttag gaatcacttc cccaacggcc aatattctgc aatttctggt cgcgggtgac
      121 gtgaaataca ttaactgggg cgttttcctg gtgttaggga tcttcgtggg gtcatttatt
      181 gcagccaaag cgagccgtga gttccgcgtt cgcgcagctg atgcacaaac aacattacgt
      241 agcgggttag gtggtgtact gatgggcttc ggtgccagta ttgcaggtgg ttgctctatc
      301 ggtaatggac tggttatgac tgcaatgatg acctggcagg gctggattgg ccttgtattt
      361 atgattctcg gagtctggac tgcatcctgg cttgtgtatg ttcgaccgca gcgtaaggcg
      421 cgactggcga ctgctgcggc aaattaagta aggtgtaaag atggcgatta aaaagctgga
      481 tgtggtgacg caggtctgtc cgtttccact catagaagca aaagcagcac tggcagaaat
      541 ggccagcggc gatgagttgg taattgagtt tgattgcacc caggcaactg aagcaatccc
      601 acagtgggcg gcagaagaag gacatgccat caccgattat cagcagattg gcgatgcagc
      661 gtggagcatc accgttcaaa aagcctgact caacattgtc ctccgccgta ccagcggcgg
      721 aggcttcaaa ttagacgatc tcttccgcgt actgccaaag tgcttttaac agcgccactt
      781 tttctttgtc atcggcatat tgttgtacca gcatctgcaa ttcatcagca taaccctgca
      841 aaaactctgg cgtgaatacc tggcggcggt gctccagcca gcgttgctgc tcggcataat
      901 ccagcgtccc cgggaagttg cgtgcccgat aattgaacaa cagcttttca atccgtttat
      961 caacaaaagt gatatccagt gccggtaaat tacgtggctc ggtttccagc acaattttca
     1021 ttgctgcacg atctgcgtca ctgaaaaagc cgttataaag ctgtgcatcc acgttatctg
     1081 taggcgtaaa cggttcggct tccgcgaata tcgccaccac tttttcacgc acttgcggat
     1141 tttcacgcag aattttcagg ttatcgaggc aatgctgacg attaattccc agtcggtcgg
     1201 catcttccgg gcgtagcgta ttcgcctggg ccagcaccgg acatttattg atgtgcacca
     1261 gcttaaccgg aacggcggcg ttatcgccaa gatcggtttt tgcggtatat aaacgctcgc
     1321 gcaatgtgtc gctatccagt tccagtaatg gcgaaatgtc tcctgccaaa tccaccataa
     1381 ttacagcatt gcgattttca ggatgccacg ccagcggtgc cacccagctg gtattgccgc
     1441 tccatgcccc aaacattccg gaaacgtgaa ccaggggggg catctgcgga acatcaatca
     1501 acgccatcag tttgtgttta ttacgatggg taaagagata atcaaacagg cgtggctgac
     1561 gcgtttttac cagtttcgcc atcgcaatag tggcgtacac atcagccatc gcatcgtggg
     1621 cgttgctatg ttcaatacca ttcgctttgg ttaaatgctc aaggcgaaag ctcggtagac
     1681 cgtcatcatt ttcaggccag tttattcctt ccgggcgcag ggcataacag gcacgcataa
     1741 catccaacaa atcccagcgc gagttatcat gctgccagct ccaggcgtaa ggatcgtaga
     1801 aattacgata aaaaacgttg cgtgtgactt cgtcgtcgaa acgcacattg ttgtagccca
     1861 gaatacaggt cttcggtacg gtaaaaagcg agtgaatacg ggcggcaaac gcggcttcgt
     1921 tttctccttt cgcccgtgct tcctgcgggg taataccggt aattaatact gctccaggct
     1981 ggggtaaata gtcatccgcg ggcttgcagt aaaagacttc gggttcgccg atgacattga
     2041 attcgctatc ggtgcgaatg gctgcgaact gtgcagggcg atctaacgcg gggtgcgtgc
     2101 caaaggtttc gtaatcgtga aagaggaagg taggttgttt atctgtgtct gtcattgtct
     2161 agcattgtcc actgtagtta attaactgtc tgttataact cgaaaaacaa ccattttttc
     2221 acctgagtat gtctacgaac gtcaaatata gttgtttact gtgcgctgtt gtccatgtga
     2281 tattgtgtac cagatgtgta ccaaaccatt atttctgagc gtaccaaata ttatttatgg
     2341 ctataagcga cacaaaactg cgtagtattt atggtaaacc atattcgggc ccacaagaag
     2401 tggctgatgc c
//
LOCUS       DADKRT010000299         2407 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.304, whole genome shotgun sequence.
ACCESSION   DADKRT010000299 DADKRT010000000
VERSION     DADKRT010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.304"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            128..1264
                     /gene="potA"
                     /locus_tag="JQ356_004178"
     CDS             128..1264
                     /gene="potA"
                     /locus_tag="JQ356_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HAY4624067.1"
                     /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMREGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
                     NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
     gene            1248..2111
                     /gene="potB"
                     /locus_tag="JQ356_004179"
     CDS             1248..2111
                     /gene="potB"
                     /locus_tag="JQ356_004179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309597.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HAY4624068.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASR
                     LLNKKVSELDD"
     gene            complement(2343..>2407)
                     /locus_tag="JQ356_004180"
     CDS             complement(2343..>2407)
                     /locus_tag="JQ356_004180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4624069.1"
                     /translation="LNRVDTSTAPDIEWPTSPAE"
BASE COUNT          574 a          589 c          608 g          636 t
ORIGIN      
        1 ctaagccagt aattcacaac aaagattggc gattcaagcg gtttgccgta gaattaccgc
       61 cctcattaag agtcaccaag gtggttaacc acaaaccccg catcggtaag ccatccgttg
      121 cgtttacatg ggacagagta aaaaattgaa taaacaaccg agttcgcttt caccgctggt
      181 gcaattggcg ggaattcgca aatgctttga tggtaaagag gtcattcccc agctggatct
      241 gactatcaac aatggcgagt tcctcacgct gcttggccct tctggctgcg gtaaaacaac
      301 cgttcttcgc ctgattgcag gtctggaaac tgttgattcc ggacgcatca tgctggataa
      361 cgaggacatc acccacgttc cggcggaaaa ccgctatgtg aacactgttt tccaaagcta
      421 cgcacttttc ccccacatga ccgtgttcga aaatgtggcc tttgggttgc gcatgcaaaa
      481 aacccccgct gctgaaatta cgccccgcgt gatggaagcc ctgcggatgg tgcaactgga
      541 aaccttcgct caacgtaaac cgcatcagct ctctggtggt caacagcaac gcgtcgccat
      601 tgctcgcgcg gtggttaaca agcctcgtct gttgttgctg gatgagtcgc tctcagcgct
      661 ggattacaaa ctgcgtaagc aaatgcagaa cgagctgaaa gcgttacagc gtaagcttgg
      721 cattacattc gtcttcgtga ctcacgacca ggaagaagca ctcaccatgt cagacaggat
      781 tgtggtgatg cgcgagggtc gcattgagca agacggcacg ccgcgtgaaa tctacgaaga
      841 gccgaaaaac ctgtttgttg ccggcttcat tggcgaaatt aatatgttta acgccacggt
      901 gatcgagcga ctcgacgagc agcgcgtacg cgccaacgtt gaaggccgcg aatgtaatat
      961 ctacgttaac ttcgccgttg aaccggggca aaaactgcat gttctgctgc gcccggaaga
     1021 cttacgtgtt gaagagatta acgacgacaa ccacgctgaa gggctgattg gttacgttcg
     1081 tgagcgtaac tacaaaggca tgacgctgga gtcggttgtt gaactggaaa atggcaagat
     1141 ggtgatggtc agcgaattct tcaatgaaga cgatcctgac tttgaccact ctctcgacca
     1201 aaaaatggcc attaattggg tagaaagctg ggaggtcgta ctggctgatg aagaacacaa
     1261 gtaagttcca gaatgtagtg attgtcacta ttgtcggttg gcttgtgttg tttgtctttc
     1321 tgcccaacct gatgatcatt ggcaccagct ttttgacccg cgacgacgcc agtttcgtca
     1381 aaatggtctt tacgctggat aactacacgc gtctgctcga tccgctctat tttgaagtgc
     1441 tattgcactc gctgaatatg gcgctgatcg ccaccctcgc ctgcctggtg ctgggctatc
     1501 catttgcctg gtttctggcg aagctgccac acaaggtgcg tccgctgctg ctgtttctgc
     1561 tgattgttcc gttctggacc aactcattga ttcgtatcta cgggctgaaa attttcctca
     1621 gcaccaaagg ctatctcaac gagtttttgc tctggctggg cgttatcgac acaccaatcc
     1681 gtatcatgtt cacgcccagt gcggtgatta tcggtctggt ttacattctg ctgccgttta
     1741 tggtgatgcc gctgtactcc agtatcgaaa aactggataa gccgttgctt gaggcggcgc
     1801 gcgatctcgg tgccagcaag ttacagactt ttatccgcat cattattcca ctgacgatgc
     1861 cggggattat tgccggatgt ctgctggtga tgctgccagc gatgggcctg ttctatgtgt
     1921 ccgacctgat gggcggtgcg aaaaacctgc tgatcggtaa cgtcatcaag gtacagttcc
     1981 tcaatattcg tgactggccg tttggtgcag ccaccagcat tacgctgact atcgtaatgg
     2041 gcctgatgtt gctggtttac tggcgcgctt ctcgtttgct gaataagaag gtgagcgaat
     2101 tagatgatta atcatttata ttcaatgcat taagtttgtt tttgagtggt tttgccgttt
     2161 aaggtaacgg cgttatagat cctatcaaaa tcaatcaatt ccattctggt tttggagaaa
     2221 gatttttcga gagcttcggt ctttaactaa aactgattgc gtataacccc aatacccctc
     2281 cccgactatc tgaatggtcg gggaggcact tcacgcacaa aatatcatcc ctgcgccgtt
     2341 gattactctg caggtgaagt cggccactca atatcaggtg cagttgatgt atcaacacgg
     2401 ttcagca
//
LOCUS       DADKRT010000300         2380 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.305, whole genome shotgun sequence.
ACCESSION   DADKRT010000300 DADKRT010000000
VERSION     DADKRT010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.305"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..303)
                     /locus_tag="JQ356_004181"
     CDS             complement(<1..303)
                     /locus_tag="JQ356_004181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624070.1"
                     /translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRER
                     TWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYA"
     gene            complement(313..1695)
                     /locus_tag="JQ356_004182"
     CDS             complement(313..1695)
                     /locus_tag="JQ356_004182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HAY4624071.1"
                     /translation="MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
                     GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
                     LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
                     LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMR
                     EDLRDIWQNDQWRIVGLLTIFNILAVCVLGGAMMYYVTWILGTPEVFVAFLTTYCVGN
                     LIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQL
                     VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA
                     AEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQ
                     QQFTSQEVQN"
     gene            1988..2082
                     /locus_tag="JQ356_004183"
     tRNA            1988..2082
                     /locus_tag="JQ356_004183"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2022..2024,aa:Sec,seq:tca)
     gene            2191..2336
                     /locus_tag="JQ356_004184"
                     /pseudo
     CDS             2191..2336
                     /locus_tag="JQ356_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001626279.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
BASE COUNT          640 a          596 c          558 g          586 t
ORIGIN      
        1 agcataacgt tctgtgtttt cgattgtgac cttcacgtcc tgcaaaatat tgagcggata
       61 atgaggaccg ttattcagcg ctccctgaaa atgctcaatc cgcacaccga caataccttc
      121 ctgtggggag aaaaagcgca gcgtaaataa aggcgtatca agctgccagg tacgttcacg
      181 cacatcacgg ggggcagcat agaccaccat ttcattatcc tgctgttcaa cctcgaacac
      241 ctgaagcggg tgaatcaaat tgaggccagg ttgaatcaac cagtttccat cgctaatttt
      301 cattgccgtt ccttagttct gcacttcttg agaggtgaat tgttgctggc aacggcgttt
      361 accctgagcc agctgttcca taacggtttt cagattgtgc gtcgtgagtg agtagtagcg
      421 tttagcgata atcgcgctca gcaaataaca gatcgccgga acaatcgtga atagcgcaat
      481 aatgatgcta atcgtggcgc tgttctgcgc tttttctgcc gcatcatatc cgccataagc
      541 cagcatccag ccgataagag cgccgccgaa ggccaacccc agtttgagca caaacagcgt
      601 gccagcaaaa ctgatcccgg tcaggcgttt accattgcac cactcgccgt agtcgacggt
      661 atcggacatc attacccact ggataggtgt caccagttga tgcaacacac caatcacgaa
      721 gatgaagaca aacatagtga tgctggcctg catgggaaca aagaacatcg cgaggctaat
      781 cactgccagc agggcgttcg tccaccagaa gatagtgact ttacatttcc agtcggtcag
      841 aggttttgcc agtgcggaac caatcaggtt acccacgcaa taagtggtga gaaaagcgac
      901 aaacacttcc ggcgtgccca aaatccatgt gacgtaatac atcatcgccc caccgagtac
      961 gcacaccgcc aggatattga aaatggttag taaaccgaca atccgccact ggtcgttttg
     1021 ccagatatca cgtaaatctt cccgcataga cgttgttgta ggtggtgctt caacgcgttc
     1081 tttagtggtg aagaaacaaa atgccagcat catgaatgcc accacggaaa ggaccgcgat
     1141 accgccctgg aaaccgagtg gtttattatc accgccaatt aaattaacca gtggcatcat
     1201 cagaacagta gaaagcatgc ctcccgcggt cgccagcaca aaacgccagg attgcagcga
     1261 gatacgctga gtcgggtcat tggtgattac accacccaat gcgcagtaag ggatattgac
     1321 gacggtataa agtaaggtaa gtagggtgta agtaattgct gcatagatca ttttgccgtt
     1381 catactgaga tctggcgtgc tataggccag tacacagacg atcccgaatg gcagtgcgcc
     1441 aaacagtacc cacggacgaa atttacccca gcgagagcgc gttcgatcgg ccaacaaccc
     1501 catgcaagga tcggaaatcg catccagtgc acgagcgacc aaaaacatgg ttccgacaaa
     1561 accggcagga atgccaaaaa tatcggtata aaagaacatc atatataaca ttacgttatc
     1621 gaaaataatg tggctggcgg cgtctcccat gccataacca attttctctt taacggacaa
     1681 cacttcactc ttcatctgct tttccttgat gctatagggg tgctgagacc gataacgcat
     1741 tttgtaaacc atccctgtga gagcgaatat tccgatatct ggttattaat ttatgattct
     1801 tgttttatgt gatcgtggta gcgttaattc cgctcatatg tcattgtaaa atatgggttt
     1861 tatatgaact ataatgcttt cgtgataata cgctgcgtgt attaggcgga aaaaactgat
     1921 ctgggggatg tagaaactca aggaagtagc tataatgcgc cccgcctcca tgtagcaatc
     1981 gaggcgcgga agatcgtcgt ctccggtgag gcggctggac ttcaaatcca gttggggccg
     2041 ccagcggtcc cggacaggtt cgactcctgt gatcttccgc caaaatgcct cttctgacgt
     2101 tctccaaccc cttgtaatac tgtcaatcca gatattttct actgctcaat attcaatcgg
     2161 cttcaggaat acctggtcta aggttttgtg atggacgatg agcggctgaa gaatccgcct
     2221 gtcggttctt ctgtcctcga acgcatccgc gatatgcgcg ccagcatgtg ccgtgtttat
     2281 ttgcaggtga tttgccccct gctggctctc agccaactgt atcgccatta aggtgaagat
     2341 gttgttttac acgctccata acaccctttt ttatacgact
//
LOCUS       DADKRT010000301         2374 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.306, whole genome shotgun sequence.
ACCESSION   DADKRT010000301 DADKRT010000000
VERSION     DADKRT010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.306"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(117..1571)
                     /gene="ospC2"
                     /locus_tag="JQ356_004185"
     CDS             complement(117..1571)
                     /gene="ospC2"
                     /locus_tag="JQ356_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC2"
                     /protein_id="HAY4624072.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSS
                     SGISEKHLDHCADTVKSFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFNFRHQSNANLSNNTLNIKSFD
                     KIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQETLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIRLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNAKSDMALYLLSK
                     FNFTKQDIAEMEKMNNNMYCELYDVEYLLSEDSANYKVLEYFINNGLVDVNKRFQKAN
                     SGDTMLDNAMKSKDSKTIDFLLRNGAVSGKRFGR"
     gene            1996..2374
                     /locus_tag="JQ356_004186"
                     /pseudo
     CDS             1996..2374
                     /locus_tag="JQ356_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          726 a          442 c          410 g          796 t
ORIGIN      
        1 cgttcaccac atgcaatgtg ttgttgcagg ggaacggtct gcaccatccc ctatatcgat
       61 caatataaca aaaatgacaa cgtcagattc agggcacaac ctaaatatat tttaggtcac
      121 ctcccaaatc gtttgcctga taccgctcca tttcttaata aaaaatcaat tgtttttgaa
      181 tctttgcttt tcattgcatt gtcaagcata gtgtccccac tatttgcttt ttgaaatctt
      241 ttgtttacat caaccaatcc attattaata aaatattcta gcactttata gttggcacta
      301 tcttcactaa gtaaatactc aacatcatac agctcacaat acatattgtt gttcattttc
      361 tccatctctg cgatatcttg ttttgtaaaa ttaaatttag atagtaaata aagtgccata
      421 tcagattttg cattgcctag agaataagca agagcttgat gagccatttt tttatcagtc
      481 accttattgt taatttcttc ataattggat gctttaatgg catcctccaa agatatatct
      541 ctgagtctta tctttttgaa gttatctgtg cttagcattc ttggtatatg atactcaagc
      601 tgaaacacaa agtttataat tctatccaga ctaacaggat caatgttttt attataacaa
      661 aactctcgga atctttgatc tttactcttt cttataaaat caataagatg caacccaatt
      721 ccaagcctca tatctttagt attaaatatt ggcacatcag tttttccctg attaccatgc
      781 acatacctgc taacttcatc cacaacctct ttaaagttat ctaagaaaaa tgattggtgc
      841 tcatggtaaa aaacaggtgg aatagcatta tcaaagtggt cggttaatgt catatatcca
      901 tatggagagt catgatcaat gatatacgca ttagcaccaa aatccacagt atgatgtgtt
      961 ttatttagtg ggagtgtttc ttgatgattg gaaatttcaa ccccaaaaaa aacaaaatcg
     1021 tggttagcta tttcttcaat atcctcagag aatgtgtttt tatatgtttg tatattctca
     1081 gacttaattt tatcaaagga cttaatatta agagtattat ttgacaggtt agcgttactt
     1141 tgatgtctga agttaaaatc agaattaata ataatagaga gcaagtgacg ttcatccgaa
     1201 gaaagaggat gagttttttg tattatttca gaaagatagt gtctggacac cttatcgagg
     1261 tgctcaagtg accgaaatga tgaccgtgct ccagatggcg cttcaataga aagatttaat
     1321 gatttgaaac tggtcccttg agagaacatt ttactataac tttgcgctgc tatagacttc
     1381 cttaaaaagc ttttcacagt atcagcacag tgatctaaat gtttttcact tatgccagaa
     1441 gaggatgagt ttgttacgca tgatatgttt ttttgtaatg cttttgtatc tttgttcgga
     1501 tttatttttc catcaacaag atcaatattg ttctgaacat taatatgatt tactgcttca
     1561 ggtattttca taaaacatcc cccattatgt gcgtttttat ctgcagttat ttagaataat
     1621 attatctaac ttaatatttt cttgtatgta ttataacgaa catattttaa tatgttgtac
     1681 gattttcact ctgaaatccc ctgagtttaa tcacacttcc tttactgaaa ggaattattg
     1741 caacagtatt atttgttttt ggatatatat cttgcgcctt gttatgtagt taatgctcag
     1801 aatatgatag ataaaataga gacgcagaac agggcatgct cataacatga tgataacata
     1861 aaaaattagt aacaataaat gaaagaatca tgggcgctca acaaaaagag agctaaatag
     1921 ctgcgcggaa tagtaggctg tgtcccttaa tcatctgagt tatagtaact gtctgtttac
     1981 acaacatatt gaactatggc tcgctacgac cttcccgatg aggcatggac catcatcaag
     2041 cccctgttac ctcctgaacc cgccacacca cgggccggac gcccatgggc tgagcaccgt
     2101 aaaatcatca atggcatgtt ctgggtgtta tgttccggtg caccatggcg cgatttaccc
     2161 gaacgatatg gggcatggaa aactgtttat aaccgcttta accgatggtc aaagtcaggc
     2221 gtgattaata ttattttcaa caggttgctt tcgctacttg atgcaaacgg ctttattgac
     2281 tggtctgcca ccgcgctgga tggcagtaat atccgggcgc tgaaatgtgc cgccggtgct
     2341 caaaaaaaca tcccgatatc gacggagata atgg
//
LOCUS       DADKRT010000302         2314 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.307, whole genome shotgun sequence.
ACCESSION   DADKRT010000302 DADKRT010000000
VERSION     DADKRT010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.307"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(45..381)
                     /locus_tag="JQ356_004187"
                     /pseudo
     CDS             complement(45..381)
                     /locus_tag="JQ356_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502602.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(914..1240)
                     /locus_tag="JQ356_004188"
     CDS             complement(914..1240)
                     /locus_tag="JQ356_004188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624073.1"
                     /translation="MFKYAEMLMAEEDNKVCELIFKQQDNLILKINDRFPRIIIKKYR
                     TLQGKVVWLWILPFVIEWLILCALGVNSWRGKSKYLDYYLLRDEMPVRLVSIIFPTLL
                     ALFLLA"
BASE COUNT          761 a          446 c          402 g          705 t
ORIGIN      
        1 aatatgaaaa gatggtttaa ataccccgtt acttttgact tacactatac ggtatcgcat
       61 cgtttaatat tcgcaccggc cagattttta tttctattag ttgtcacaat actgaatgcg
      121 tacgaccaca gtattctggc tcctgtgtgg tcatgcttta attctgcgtt ccggacagat
      181 aagcagttgc ttgcaggaat ccttcttgtg ttaatgtcag ttcccctttt taccagtgct
      241 gatttccaca ttccgtccaa cagagcttat agcctttccc tggattatag cattgtccgg
      301 ctgaagttct ttttgaataa taatagaagc actgctggca gatccagtcc gtttttcata
      361 acccactgta ctgataacca taatctaatc agtagaaatt gagtcgaaaa taagcactac
      421 tccatacagg ataattagag gtcagtttga ttattcacaa ttcattatca gcattttctg
      481 tttctgacga aatcaacatg aaaagaacca tatatgataa ttattataat aacggcttta
      541 attggaatac atatattaca acgtattata tataattggt attctgggaa ctatattctc
      601 aaaatacagt agaaacgagg tatgtttctg gtggaaagga cagtgggatt aaaaagtaag
      661 aattgataaa aaaacgccag caacacatag tgccggcgga gggaataccc catggagaaa
      721 atgtgatgcc tagagcacca tgaatatata attaaaaata gttagagttg tcaatacttt
      781 cacaaaaata attttcgtag tttcgtagta tagaaagata tttttatgca tgacctacct
      841 gaatttgctc cgggtagagg ttataaataa aaattgaatc acgacaaaca caatattcat
      901 agtatggcga tgcctacgcc agcaagaata gcgccaataa tgttgggaat ataatagaca
      961 ccagacgcac aggcatctca tctcttaaca aataataatc aaggtattta cttttgcctc
     1021 gccagctgtt tacgcctaaa gcacacaaga ttaaccattc aataacaaat ggcaatatcc
     1081 atagccatac gactttacct tgtaatgttc ggtatttctt tataattatt ctgggaaatc
     1141 tatcatttat ttttaaaatc aaattatctt gttgtttaaa aataagttca catactttat
     1201 tatcttcttc cgccatcaac atctctgcat acttaaacat ttcagaacgt tcctttagca
     1261 cagaagagta attatatgtc cagttcccag gcaataatgc ttatggatat ttaactaata
     1321 atttagagaa tattttgcaa taatatttgg ctgtattcag aaatacctga aaaatcatac
     1381 tatacagccc cagggaatgg ataaagattc taacaaagca tttcaacaat atatgcttgt
     1441 taaaaatcca tatcgaaatg ccgttgcagc attaatatat gcctcattca taaaatgtaa
     1501 aagagcaagc tcgtaccagt aggggggaaa ttcattgaca tgtcctgtca atacgtacag
     1561 agccctgtca tgcttgccag cacgtaacaa ttccgtcccc agtaaccagc gtgtcccctg
     1621 attattctca gggttatatg ttagtatttt atcaatgagt ataacggcat cctgatgacg
     1681 ctgtaaatga acattcgcca gaattgcagc ataaagagcg caaatgcata tgccagatga
     1741 gcgtgaatat caatgatgtc aggagcatgt caggcaagac gcctgagttt gttgacgtaa
     1801 tttgtttcgt ttatttcatc actatcgtat gcgtcaagag ttttttcaaa ctcatcccga
     1861 aatgggccaa gcctggtttc aggaaataag aaatacccct agttattgtt cacttaaaag
     1921 tataatttgt aattcaaatc ctgagcctgt aaaacgggga gtaacatatt ctattctgaa
     1981 gagaataaaa gtcgtgatgc gatgtatcaa gcccggattg taatcccaga ttaacataga
     2041 tcacaaaaca acttattctt cactaacgtg aagataaata tcgttgtatg ccttatcacg
     2101 actacgaata ccagcaagat acaactgaca tacggaaaga taccatgttt tttactcccg
     2161 aaaataacgc taaaaagcta cttccccatc gtttgtcctt agtattgtca gcgccaacaa
     2221 tgtgggctga catgataaag ctgtctagga aaacgttcgc ctcctcagcg gacaatccaa
     2281 atggtgattg tccctattaa acgtttattt tgaa
//
LOCUS       DADKRT010000303         2276 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.308, whole genome shotgun sequence.
ACCESSION   DADKRT010000303 DADKRT010000000
VERSION     DADKRT010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.308"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..350)
                     /locus_tag="JQ356_004189"
     CDS             complement(<1..350)
                     /locus_tag="JQ356_004189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inhibitor of g-type lysozyme"
                     /protein_id="HAY4624074.1"
                     /translation="MKIKSISKAVLLFALLTSTSFAAGKNVNVEFRKGHSSAQYSGEI
                     KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP
                     ASGKYELRVLQTRN"
     gene            592..885
                     /locus_tag="JQ356_004190"
     CDS             592..885
                     /locus_tag="JQ356_004190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624075.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL
                     PLDGRKKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK"
     gene            957..1616
                     /locus_tag="JQ356_004191"
     CDS             957..1616
                     /locus_tag="JQ356_004191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HAY4624076.1"
                     /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
                     IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
                     TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQG
                     TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
                     L"
     gene            1693..2154
                     /locus_tag="JQ356_004192"
     CDS             1693..2154
                     /locus_tag="JQ356_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415699.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HAY4624077.1"
                     /translation="MAEHLMNDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDED
                     TDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLA
                     EGKDLPVWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
BASE COUNT          594 a          490 c          585 g          607 t
ORIGIN      
        1 tcgtttcggg tttgcagcac tcgcagctca tatttgccag aagcagggag tgagtattgt
       61 ccgtgactat cgagttctgg ggaatatctg gataaatcaa cagaatcatc gattcctggc
      121 ccgaagaggt aagtatcagc gccttcatta gagatactca catgtacttt ctgacctttt
      181 ttggcataga aggtatatgt atcgtaatcg tatcccttta tttcgccgga gtactgagcg
      241 ctgctatggc cttttctgaa ctcaacattg acattcttac ccgcagcaaa gctcgtggag
      301 gttagcagtg caaacagcaa tacagcctta ctgatgctct tgattttcat tggtagtctc
      361 ctgttcagaa tgagtacgat gaactgttat aatataacaa tccctaacgg gagaattcca
      421 gtggcttttc tgcgttcggt aaaatcccgg cgcggcattt tttgccggtg ggattactta
      481 taaaggggca tggactcaac aaaccgcaga aatctacagc tggctggctt gtggcgcggg
      541 tttcattgat gttagcttat gccaaaacct ggcatcttaa aaagtaaaag tatgttttgt
      601 gtgatttatc gaagcagcaa gcgtgaccag acctatttat atgtcgaaaa aaaagacgat
      661 ttttcgcgtg ttcctgagga actgatgaaa ggttttggtc agcctcagtt agcgatgatt
      721 ctgccgttgg atgggcggaa gaaactggtc aatgctgata ttgaaaaggt taaactggca
      781 ttaaccgagc aaggttacta tttgcagtta ccgccaccac ccgaagattt gctgaagcaa
      841 catctttccg tcatggggca gaaaacagac gacacgaaca aataaccgat atccggcggt
      901 ggcattatct ttgtcggcgc gggttttcat atccacgata aggtgagggg aacgttatgt
      961 atcaacatca caactggcaa ggtgcgctgc tggattatcc ggtgagtaaa gtagtctgtg
     1021 ttggcagtaa ctatgccaaa catattaaag agatgggcag cgcagtgccc gaagagccag
     1081 tgctgtttat taaaccagaa acggcactgt gcgatctgag gcagccattg gcgatcccat
     1141 ccgatttcgg ttcagttcat catgaagtcg aactggcggt gttgattggt gcgacgctgc
     1201 gtcaggcaac ggaagagcat gtccgcaaag ccattgccgg ttacggcgtg gcgcttgatc
     1261 tgacattgcg tgatgttcag ggaaaaatga agaaagccgg gcagccgtgg gaaaaggcta
     1321 aagcgtttga taactcttgt ccgctttccg ggtttatccc cgcggcggaa tttaccggcg
     1381 atccacaaaa tacaacgctg ggcctgagcg taaacggcga acaacgccag caaggtacga
     1441 ctgcggacat gatccataaa atcgttccgt tgatcgctta tatgagcaag ttttttaccc
     1501 tcaaggccgg tgacgttgtg ttgacaggca cgcctgatgg cgtcggcccg ttgcaaagcg
     1561 gtgatgagct gacagtcact ttcgatgggc attctttgac aactcgcgtt ttgtaatact
     1621 ttttgccgcc tgaaagcggc ggcaaaactt gcatcgctgt gccagactgg ttataaggtg
     1681 cgttttaacg taatggcgga acacctgatg aacgatgtac ctttctggca aagtaaaacc
     1741 ctggacgaaa tgagcgatgc ggaatgggag tcgttgtgtg atggttgcgg tcagtgttgc
     1801 ctgcataaac tgatggatga agacaccgac gaaatctact tcactaacgt cgcctgtcgc
     1861 cagctcaata ttaaaacctg tcaatgtcgg aactacgaac gtcgtttcga gtttgaaccc
     1921 gactgcatta aattaacccg tgaaaatctg ccaacattcg aatggctgcc aatgacctgc
     1981 gcttatcgtt tgctggcgga aggtaaagat ttacctgtgt ggcatccgct acttactggt
     2041 tcgaaagcgg caatgcatgg tgaacgtatc tctgtgcgtc atatcgcagt gaaagaatca
     2101 gaagtgattg actggcagga tcatatctta aataaacctg actgggcgca gtgataaatt
     2161 taatagatgt tgatgggggc tttcttaata tacgtctgga tgctcgccat ttcgtagccc
     2221 tgtttttgaa agcgctctgt cataatgaga gttacccgat accttattat caacag
//
LOCUS       DADKRT010000304         2261 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.309, whole genome shotgun sequence.
ACCESSION   DADKRT010000304 DADKRT010000000
VERSION     DADKRT010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.309"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            111..432
                     /locus_tag="JQ356_004193"
                     /pseudo
     CDS             111..432
                     /locus_tag="JQ356_004193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232281.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(466..672)
                     /locus_tag="JQ356_004194"
     CDS             complement(466..672)
                     /locus_tag="JQ356_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001570270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624078.1"
                     /translation="MTVSYKITYEHRDGDQIRMEEVLFHSEHEPTKDEIHDAVRKDTV
                     RFNSPSNGVTAVSGFKVISVVPVP"
     gene            complement(1170..1243)
                     /locus_tag="JQ356_004195"
     tRNA            complement(1170..1243)
                     /locus_tag="JQ356_004195"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1209..1211),aa:Gly,seq:ccc)
     gene            complement(1322..2077)
                     /locus_tag="JQ356_004196"
     CDS             complement(1322..2077)
                     /locus_tag="JQ356_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HAY4624079.1"
                     /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV
                     KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTT
                     KTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA
                     AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKTGQKIATMGST
                     DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
BASE COUNT          603 a          531 c          491 g          636 t
ORIGIN      
        1 tcatacacta aatcagtaag ttggcagcat taccaatttt gctaagttaa tgcattaatc
       61 taaaaacgct ttaaatcaat acataaccat tatctcttgg gattatttac atgcgcaaaa
      121 gtttaatgct gttacttgct tcaacattga ttatttctgg atgtgcaaca aaaaaacaac
      181 tcgttccaac tggtggaagc aaatcagacg gcacagttag gatgagttat tcttacggta
      241 tgtttgaaag tcctgttgta gatccacaac aaggcatgaa tgcagccaaa gcgcgttgtg
      301 ccgcttaggg gatattcagg agccgagcct tttggtggat tcacttctca atgttcacaa
      361 ccttcttcat ctggttgtat gcaaacactt gtgactatcg aatatcaatg cactggcgat
      421 attaagaagt aataattagg ggcttccagc cccttctata accattcatg gaacagggac
      481 aaccgaaatc actttaaacc ctgaaacagc cgttactcca ttagatggag aattaaatct
      541 cacagtatct tttcttactg catcatgaat ttcatctttt gttggttcat gctctgaatg
      601 gaataaaacc tcttccattc taatttgatc accgtctcta tgctcataag taatcttgta
      661 gctaacagtc atatcaacct catgcagggg aattgtgaga ttattataga caatagaaac
      721 cataaagccc cgttggtgat acagcaacaa gcgggagcgt agcgacttca tcagattgtc
      781 agaaagatca caccttatca ggataaccgt gtacccgttg ggagcgtggc tgaaacgctg
      841 atagagcttg catatggttt gcaaggacca atatcaccat aaacctgttt acgcagccac
      901 aaggccgcac atcgggctta aatgcgtgtg ttcagtctgt cgatgacatt acaatgccag
      961 gatgggcttt atcttcacgt tgtgctatcg cggtgtgaga ggtgcaactg ccgccaacgt
     1021 taggttatac tgtcatctca ccgtgtaact taacgtgaca gttactaagg gcggatcaca
     1081 atggtagaac tcctaagcaa attaaatagg taactgttta agttgctgac agagaagact
     1141 tttttagtct tctccacctg gggagattct ggagcgggcg aagggaatcg aaccctcgta
     1201 tagagcttgg gaagctctcg ttctaccatt gaactacgcc cgcttcgaga tgcgtaaggc
     1261 attataaacc ttacgctctc cttagcaagt gccgcgctgc tgactgctga ttaattcgcc
     1321 atcagcattt tggcttgctg ccctgcggcg gcaagtaacg tagcggatca attgccgttg
     1381 cacggtaacg aatctggaaa tgcaggcgaa cagatgccgc atccgtgctc cccatagtgg
     1441 cgattttttg cccagtcttc acgctttgcc cattatttac cagcatcgtg tcattatggg
     1501 cgtaagccgt aatgtaatct tcactgtgtt taatcatgat gagattaccg tagccacgca
     1561 gctggttgcc cacatacacc acctttcctg cacccgcggc gtaaataggt gtaccccgtg
     1621 gagctgagat atcaatccct ttattgccgc catctgctgt cgaatacggc atgataactt
     1681 tccctgtcgt tggccataac caacaacgtt gccctactgg cggccaggaa gatttcggta
     1741 ccgctgatga cggtgtaacc gatgcggttt tggtcgttga tttggcggtt gatttacgtg
     1801 tactactgct acttttcgcc ccacccagtt ttagtttctg accaacttca atggtgtaag
     1861 ggggggaaat gccgttcagt cgcgccagtt cttttacgct ggttcccgtg gtgcgcgaaa
     1921 tacgatatag cgtatccccc cgtttcacgg tgtaaacgga gccggaatat gttcctgtat
     1981 cggatgattt gctacccgaa cagcccgcca aaagcagtcc aaccgataac aacatcacga
     2041 tacccagaga ttttttattc aggcgtcccg cactcaaaat ctttcctcgc ttaaaaaaca
     2101 agacgcctta tcatagcagc cagcctcttg atacccaatc tcttgcttct ggaaaaacgt
     2161 ggtaatagag aaagaggtta atttcatttg gcaaagggaa gtatcatcag caaaatattc
     2221 gctgtagagg tatcgaactt cctgactttt taccctattt c
//
LOCUS       DADKRT010000305         2245 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.310, whole genome shotgun sequence.
ACCESSION   DADKRT010000305 DADKRT010000000
VERSION     DADKRT010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.310"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>2245
                     /locus_tag="JQ356_004197"
     CDS             <1..>2245
                     /locus_tag="JQ356_004197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY4624080.1"
                     /translation="VEVNWIDPDNGHETATELVEDAQAILRYGRNVTKMDAFGCTSRG
                     QAHRAGLWQIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNS
                     QTRTLTLDREITLPSSCTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSV
                     WGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGV
                     TPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTT
                     ETTYRFRQLALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITAV
                     PKLAVYDPTVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVR
                     SVNTVGKSAFVEAVGRASDDAEGYLSFYKGLINNTHLGKELWTQIDNGQLAPDLTEIR
                     TSITNVSNEITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIA
                     GIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAP
                     TITSGGNPPAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIE
                     GDLVKTVGKPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNN
                     IYSSCSLIVKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPT
                     ASISDLLV"
BASE COUNT          538 a          547 c          695 g          465 t
ORIGIN      
        1 cgttgaggtg aactggattg atccggacaa cggtcatgag acggcgacag agcttgtgga
       61 ggacgcgcag gccattctcc gttacggtcg taacgtcacg aagatggatg cctttggctg
      121 taccagccgg ggacaggcgc accgcgccgg gctgtggcag attaaaacgg aactgctgga
      181 aacgcagacc gtggacttca gcgtcggcgc agaagggctt cgccatgtac cgggtgatgt
      241 cattgaaatc tgcgatgatg attatgccgg tatcagcacc ggtggtcgcg tactggcggt
      301 gaacagccag acccggacgc tgacgctcga ccgtgaaatc acgctgccgt cctcctgtac
      361 cacgctgata agcctggttg acggaaatgg caatccggtc agcgtggagg ttcagtccgt
      421 caccgacggc gtgaaggtga aagtgagccg ggttcctgac ggcgttgcag aatacagcgt
      481 gtgggggctg aagctgccga cgctgcgcca gcgcctgttc cgctgcgtga gtatccgtga
      541 gaacgacgac ggcacgtatg ccatcaccgc cgtgcagcat gtgccggaaa aagaggccat
      601 cgtggataac ggggcacact ttgacggtga ccggcgcggc acggtgaatg gtgtcacgcc
      661 gccagcggtg cagcatctga ccgccgaagt caccgcagac agcggggaat atcaggtgct
      721 ggcgcgatgg gacacgccga aggtggtgaa gggtgtgagc ttcctgcttc gcctgaccgt
      781 ggcagcggac gacggcagtg agcggctggt cagcacagcc aggacgacgg aaaccacata
      841 ccgcttcagg cagctggcgc tggggaatta cagtctgaca gtccgggcgg taaatgcccg
      901 ggggcagcag ggcgatccgg cgtcggtatc gttccggatt gcggcaccgg cagcgcctgt
      961 cactattgaa ctgataccgg ggtattttca gataacggcg gtcccgaaac tggctgtata
     1021 cgacccgacg gtgcagtttg agttctggtt ttcggaaaag cggattgcgg atatcaggca
     1081 ggttgaaacc agcgcccgct atcttggcac ggcgctgtac tggatagccg ccagtatcaa
     1141 tatcaggccg ggccatgatt attattttta cgttcgcagt gtgaacaccg ttggcaaatc
     1201 ggcatttgtg gaggccgtcg gtcgggcgag cgatgatgcg gaaggttatc tgagttttta
     1261 taaagggttg atcaataaca cgcatctcgg caaggagttg tggacgcaga ttgataacgg
     1321 tcagcttgcg ccggacctga ctgaaatcag gacgtccatt acgaatgtca gcaatgaaat
     1381 cacgcaaacc gtcaataaaa aactggaaaa tcagagtgct gcaatccagc agatacagaa
     1441 agttcaggtt gatacaaata ataacctgaa cagcatgtgg gctgtgaagc tgcaacagat
     1501 gaaggacgga cgcctttata ttgcgggtat cggtgccggt attgagaata cgccagcagg
     1561 aatgcagagt caggtgctgc tggcggcaga caggattgcg atgattaatc ctgcgaatgg
     1621 caacacaaag ccgatgtttg ttggtcaggg cgatcagata ttcatgaacg acgtgttcct
     1681 gaaacgcctg acggctccga ccattaccag cggcggtaat cctccggcat tttccctgac
     1741 acctggcgga cggctgacgg cgaaaaatgc cgatatcagc ggtaacgtga acgcgaactc
     1801 cgggacgctc aacaacgtca cgattaataa gaactgtcgg gttctgggaa aattgtccgc
     1861 gaaccagatt gaaggcgatc tcgttaaaac agtgggcaaa cctttcccac gggactcccg
     1921 ggcaccggag aggtggccat cagggaccat taccgtcagg gtttatgacg atcagccgtt
     1981 tgatcggcaa attgttattc ccgcggtggc gtttcgcggt gctaaacatg agcggaagaa
     2041 taacaatatt tattcgtcat gcagcctgat agtgaagaaa aacggtgctg aaatttataa
     2101 ccgaacgacc ctggataata cgctgatata tacgggtgtt attgatatgc ctgccggtca
     2161 cggtcacatg acgctggagt tttctgtatc ggcatggctg gtaaatggct ggtatcccac
     2221 agcaagtatc agcgatttgc tggtt
//
LOCUS       DADKRT010000306         2243 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.311, whole genome shotgun sequence.
ACCESSION   DADKRT010000306 DADKRT010000000
VERSION     DADKRT010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.311"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(24..2234)
                     /gene="pdeF"
                     /locus_tag="JQ356_004198"
     CDS             complement(24..2234)
                     /gene="pdeF"
                     /locus_tag="JQ356_004198"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeF"
                     /protein_id="HAY4624081.1"
                     /translation="MKLNATYIKIRDKWWGLPLFLPFLILPIFAHINTFAHISSGEVF
                     LFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIIIIIII
                     ILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASREN
                     LVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVT
                     KKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLW
                     AVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQR
                     LAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHW
                     LSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVS
                     YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQ
                     ALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMW
                     VIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPFEVSQLLAKYQIEAWQLIFEVT
                     ESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNI
                     VSNSLDYQIVASICHLARMKKMRVVAEYVENEEIREAVLSLGIDYMQGYLIGKP"
BASE COUNT          676 a          532 c          501 g          534 t
ORIGIN      
        1 tcattcaacg tatcaattaa cggctacggc ttaccaataa gataaccctg catataatcg
       61 atccccaaag agagcaccgc ctcgcggatc tcttcgtttt caacgtactc tgccactacc
      121 cgcattttct tcattcgcgc caggtggcaa atcgatgcca ctatctgata atccagacta
      181 tttgacacaa tattgcggat aaaactgccg tcaattttaa gcagatcggc attcacattt
      241 ttaagccgtg catagctggc gtagccggtg ccgaaatcat caatcgcaat ctggcagcct
      301 aattcctgaa gatgctgcaa ggtgatttgc gcctgcttaa cattggtcag agcattactt
      361 tcggtgactt caaaaataag ttgccacgct tcaatctgat atttagccag caactgactg
      421 acttcaaaag gaaaacgagc ctgacatacc gaggttggag acagattaat agcaaaacgg
      481 tgagcgggca tcttcgctct gttttcagcc ataaattgca gcgtatgctc aatgacccac
      541 atgtcgatac tcgacgataa accaaattcg tgcgcgaccg gcaagaagct atcggggctg
      601 atcagttcat cattctcacc tttcatgcgc agaagaattt catggtaaac atcaccacgc
      661 ataccggtaa tcggctgggc catcaggaaa aaatggttgt gttccagcgc ctgctgtagt
      721 cgattcatca tcgcgacttt atctttcaat tcgcgttgca aatacattgc cccgcgacgc
      781 tgcatatttt ccggggcgtt ggtcacgatg gaaagttcgg cgaccgtatt tagctctccc
      841 agcagcaggt agatatgatt cactggcgag cgcacatagc agtaactgac gccaatctgc
      901 ggttgcatcg gcatgccatc ccaaaagaaa cgaaattgct tgagatggct atccagtgcg
      961 gtaatgcgct cctggtgcga ttctgtattc agtcgcagcg cgagatcgtt acccgaaagc
     1021 tgataaacat cttcacccgg ttccagcaag ggtgacagcc agtgagaaag tttttgcttg
     1081 tattgaatcc gcagcatgat gccatagttc ttaaccagca tttccatgcc agggatgcgt
     1141 aaataacaaa gcgcagacca gggggcatca cgcaacgcgc gattcagggc gcgaacattt
     1201 ggcagatgaa ccaccgggtc cacatacgca agccgctgaa tgcgtctgac taccgctctc
     1261 tgacgggttg ccagtacagc catataattg acaataaaag agaataccag ataactggag
     1321 gaggttatgg tcagctgcgt ggtatagcca ggataaatgg gaatgtaatt ttgatagctg
     1381 tggatgctga tcatcaacac gaccgcccag agcagagaaa tcagcttata accatagcgc
     1441 atcgctcccc acatcatcag gggcagcaat aatgacaagg tataattggt gctaaaaatt
     1501 gtgctttttt catttaacgg catgcataac agcaacaata aagcacctaa tgccagtagc
     1561 cagagcgcga actctttttt ggtgactttg gcatcaacct gctgttttaa ttgcgaataa
     1621 tagctacgta aataaaatgg atttcgcact acccgaatga tgaagtagca cagcgggaca
     1681 ccgatcagat tacccaccag taaggcctga taattgatta aagtcccgag gttaaaaggc
     1741 atgacaccga ccagattttc tctgctcgcc aataatccta caaatgcagc aaactggaaa
     1801 agtatcagaa acagcgttgc aggaaacaca atctgccaga atatacgctg ggaaattaaa
     1861 cgggtatcac catgtgaaac gttgttacgc cggggagtaa agaccctgta accgccccaa
     1921 cagagaatga taatgataat gataatgata atgataataa aattagccgt taatgatagc
     1981 gtttcgtaaa aacccagctc tgcatatttg cggacaaaaa tccctaaggc gatccctggc
     2041 aatgccgccc agctgaaaaa catcatcatg ctgatcatca gtgccagagg cagataaaag
     2101 agaaaaacct caccggaaga aatatgcgcg aaagtattaa tgtgggcgaa aatgggcaag
     2161 attaaaaaag gcaggaacag cggaagcccc caccatttat cacgtatttt tatataagtt
     2221 gcattcagtt tcatagatgc tca
//
LOCUS       DADKRT010000307         2241 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.312, whole genome shotgun sequence.
ACCESSION   DADKRT010000307 DADKRT010000000
VERSION     DADKRT010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.312"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            296..1948
                     /locus_tag="JQ356_004199"
     CDS             296..1948
                     /locus_tag="JQ356_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858318.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY4624082.1"
                     /translation="MIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHG
                     HFWRNNHGEYGLSSQKTLVDNIRQKVINNGGSVLLLSGGDINTGVPESDLQKAEPDIR
                     GMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSANIYQKSTGRRLFSPWKIFTR
                     QNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPDIIIAATHM
                     GHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCV
                     PDKQNGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSF
                     YTPEITEDPQMLSLLTPFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSA
                     LTERIDADFAVVSGGEIRDSIESGNITYKDILKVQPFGNTVVSIDLTGKEVADYLATV
                     AQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKKYRMTTFSFNATGGDGYPR
                     IDNRPGYINTGFIDAEVLIEYIREHSPLDAASYEPKGEVSWQ"
     gene            complement(1935..2135)
                     /locus_tag="JQ356_004200"
     CDS             complement(1935..2135)
                     /locus_tag="JQ356_004200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624083.1"
                     /translation="MTKKLAALQHQLSRKVKFSNNRQKQKHKIQQLHSHIANIRRDYF
                     HKVTATVSKKHVMIVNYVITAN"
BASE COUNT          698 a          414 c          522 g          607 t
ORIGIN      
        1 cagtatcaga ccatattaat tgctgaaact gataaacatc aaaccttata gaagggtgaa
       61 tgctgaaagg gggctatggt gatcgacgtg atgacaacga caggtaagac cgtgacctga
      121 taaacctgaa ttgtgtccta gacataaagt cggtgaaggg aataaggctc aggtcagcga
      181 atcttatagt ggcccgcagc tctgactgca ataaggccgg atacagagca gcaactactc
      241 gtcgatgtca gaacaacgga agccttgcaa acggggatgc gttcatacag gtacaatgat
      301 accgttaaaa aaaaacatta cgctaataat gttcaccctg tcattactga caggaaatcc
      361 tgctatagcg tatgaaacag ataaagtata taaaataacc gttctgcata caaatgacca
      421 ccatggacac ttttggcgta acaatcatgg tgagtacggg ttatcctccc aaaaaactct
      481 ggtggacaat atccggcaga aagtaataaa taatggcgga agtgttctat tattatctgg
      541 tggtgatatt aacaccggtg tacctgaatc agaccttcag aaggctgaac ccgatattcg
      601 tggaatgaat ctaattggtt atgatgcaat ggccgtcggt aatcatgaat ttgataatcc
      661 tctaaatata ttacgtcagc aggaaaaatg ggccacattt cctttccttt ctgctaacat
      721 atatcaaaaa agtacaggga ggcgtttatt cagtccatgg aaaattttca cccgtcagaa
      781 tttgaaaatt gcagtcattg gcttgacgac agatgatact gcgaaaacag gaaattctga
      841 atattttact gatattgagt tccgtcaacc tgctgctgag gcgaggagtg tcattgatga
      901 acttaatcag caggaaaagc cagatattat tattgcggca acacatatgg ggcactatga
      961 caatggcgag tcaggttcga atgctcctgg tgatgttgaa atggctcgca gtttgccgac
     1021 tggctcatta gcaatgattg tgggaggaca ttcacaagct cctgtctgca tggccagcga
     1081 taataaaaaa cagtggaatt atattccggg gacaacctgt gtaccagata aacaaaatgg
     1141 catctggatt gtacaagcgc atgagtgggg aaaatatgtc ggtcaggctg attttgaatt
     1201 ctgtaacggt acaatgaaac tggttaatta tcagttacac ccagttaatc tcaaaatgag
     1261 aattaccaga gaagatggaa aaacggaatt ttctttttac acccccgaaa ttactgaaga
     1321 tccacagatg ttatccttac tgacaccatt ccagaataaa ggcaaagcac aactggatgt
     1381 gaaggttggg gttgtgaacg gacgtctgga aggggacaga agtaaagttc gttttgttca
     1441 gaccagtatg ggccatctga ttctgagcgc tctgacagaa cgtattgacg cagattttgc
     1501 tgttgtgagt ggtggggaaa ttcgagattc catagagagt ggtaacatca catacaaaga
     1561 tatactgaaa gttcagccat ttggtaatac ggtagtaagt attgatttga cggggaaaga
     1621 agtagctgac tacctagcta cagtggcaca gatgaaaccg gattccggag cctacccaca
     1681 atttttgaat accagctttg tagtcaaaaa aggaaaaatc gaaatgctaa aaataaaagg
     1741 taaatcggtt gaccttaaca aaaaatatcg tatgacaaca tttagcttta atgctactgg
     1801 tggggatggc tatccacgta ttgataatag acccggatac ataaataccg gatttattga
     1861 tgctgaagta cttatcgaat atatccggga acattcaccg ctggatgctg cttcatatga
     1921 accaaaaggt gaagtcagtt ggcagtgata acgtaattga cgatcatcac gtgttttttg
     1981 ctgacagtcg ctgtgacttt gtgaaagtag tctctgcgga tgtttgcgat atgggaatgc
     2041 agttgctgta ttttgtgttt ctgcttctgc ctgttgttgc tgaatttaac cttgcggctt
     2101 aactgatgtt ggagcgctgc cagcttcttc gtcaatttcg ctgattaaag tttattcatt
     2161 atggcatgat ctgcgtaagc ggctcgtcag aaccgtattg atatttacta agagctcaga
     2221 tcaactttcc agggcaacag a
//
LOCUS       DADKRT010000308         2175 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.313, whole genome shotgun sequence.
ACCESSION   DADKRT010000308 DADKRT010000000
VERSION     DADKRT010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.313"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            334..557
                     /locus_tag="JQ356_004201"
                     /pseudo
     CDS             334..557
                     /locus_tag="JQ356_004201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            666..934
                     /locus_tag="JQ356_004202"
                     /pseudo
     CDS             666..934
                     /locus_tag="JQ356_004202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001449236.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1327..>2175
                     /locus_tag="JQ356_004203"
     CDS             1327..>2175
                     /locus_tag="JQ356_004203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858398.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY4624084.1"
                     /translation="MIKSTNIQAIGSGIMHQINNIYSLTPFPLPMELTPSCNEFYLKA
                     WSEWEKNGTPGEQRNIAFNRLKICLQNQEAELNLSELDLKTLPDLPPQITTLEIRKNL
                     LTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGDNKIKELPFLPENLTHLRVHN
                     NRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLAMANNFIEQLPELPFSMNRAVL
                     MNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPRIFFSMGNSA
                     TISAPEH"
BASE COUNT          727 a          464 c          365 g          619 t
ORIGIN      
        1 gcttcttacc atatttgaaa taaagctcaa tagcgcaaat tttttgttct tcagtaaaca
       61 tgtttcatct tctgagagtc caggaaatcg tccgcatccc cattaccgtc ttatatcact
      121 ggcgctgaca tgtgctcatt gatgaagtga atctgaatga catgttttgc catatcaacg
      181 ccaaccggtg tatatttcat ttgtggagtc tccagtctga ggacgcttta tgcatcccgt
      241 attgggcagt atgatgccgg aaagctgcga ggctccacac ctgccagttt caccctttta
      301 accatcatac tactccgtgt ttaattgtgt gggatgcgtt cattacattt taacagtgtc
      361 accccgtcgg ccacgaaaga taaacaggtg accagaaaag ggatcttcat ccagcacatg
      421 ctatatcttg aacgtaacaa cctgaccctc cgcacccgca tcaagcggct ggcacgtaaa
      481 acaatctgct tctcgcgttc cgtggaaatc cacgaaaagt catcggctcc ttcattgaaa
      541 aacacatatt ctactgattg gaagcgccac ccgaaaaagt atcgtttttt tacagtaaac
      601 ttcatttagc cgactataat gtaaaaaaat aaatttttta ccgaaatata acataaggaa
      661 gtaatatgct tacacaaact atattccctt gtcttcccaa aaaacaagaa aatatcatcc
      721 ctgaagtatc aaatactata ttagtatctt ctactgttac tacagatgga tgtactgttt
      781 ttaataaaca aaaacagcca tatacgaatt gcaaatacct gctaccaacc gaacgaaaaa
      841 gttgaaattc acagctacag aaatacaatg gttgacaaag ataaatgaag ccggaattga
      901 tgaaaaacaa agccaacggt attctgattt ctgaagttaa tttcagactc gtttaagctc
      961 cattttcaaa aaaaaatata tcagggtttg ttactaataa cttctgaaaa cagaaaaaaa
     1021 atagagcagt aattctattt cagagaggag taactccatc tatcctcgat acgtactgaa
     1081 cgttatcgtg atatattcat catgctttct tcaccattat tcgagtacag ggagagacgc
     1141 aatgacctta aatacctttt tatggctgaa ttaccattct caggaataac agcagactcc
     1201 ttcccataga cggcttaggg ggaaagcaat acccggagaa agggtacaaa gcaaactgtt
     1261 ttaaaattaa taagctatat tctatttcac tagaattctt atcgctgata agaaatttta
     1321 gttataatga ttaaatcaac caatatacag gcaatcggtt ctggtattat gcatcaaata
     1381 aacaatatat actcgttaac tccatttcct ttacctatgg aactgactcc atcttgtaat
     1441 gaattttatt taaaagcctg gagtgaatgg gaaaagaacg gtaccccagg cgagcaacgc
     1501 aatatcgcct tcaataggct gaaaatatgt ttacaaaatc aagaggcaga attaaattta
     1561 tctgagttag atttaaaaac attaccagat ttaccgcctc agataacaac actggaaata
     1621 agaaaaaacc tattaacaca tctccctgat ttaccaccaa tgcttaaggt aatacatgct
     1681 caatttaatc aactggaaag cttacctgcc ttacccgaga cgttagaaga gcttaatgcg
     1741 ggtgataaca agataaaaga attaccattt cttcctgaaa atctaactca tttacgggtt
     1801 cataataacc gattgcatat tctgccacta ttgccaccgg aactaaaatt actggtagtt
     1861 tctggaaaca gattagacag cattcccccc tttccagata agcttgaagg gctggctatg
     1921 gctaataatt ttatagaaca actaccggaa ttacctttta gtatgaacag ggctgtgcta
     1981 atgaataata atctgacaac acttccggaa agtgtcctga gattagctca gaatgccttc
     2041 gtaaatgttg caggtaatcc actgtctggc cataccatgc gtacactaca acaaataacc
     2101 accggaccag attattctgg tcctcgaata tttttctcta tgggaaattc tgccacaatt
     2161 tccgctccag aacac
//
LOCUS       DADKRT010000309         2141 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.314, whole genome shotgun sequence.
ACCESSION   DADKRT010000309 DADKRT010000000
VERSION     DADKRT010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.314"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..689)
                     /gene="ipaH9.8"
                     /locus_tag="JQ356_004204"
     CDS             complement(<1..689)
                     /gene="ipaH9.8"
                     /locus_tag="JQ356_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH9.8"
                     /protein_id="HAY4624085.1"
                     /translation="MLPINNNFSLPQNSFYNTISGTYADYFSAWDKWEKQALPGEERD
                     EAVSRLKECLINNSDELRLDRLNLSSLPDNLPAQITLLNVSYNQLTNLPELPVTLKKL
                     YSASNKLSELPVLPPALESLQVQHNELENLPALPDSLLTMNISYNEIVSLPSLPQALK
                     NLRATRNFLTELPAFSEGNNPVVREYFFDRNQISHIPESILNLRNECSIHISDNPLSS
                     HALQALQRLTSS"
     gene            complement(951..1046)
                     /locus_tag="JQ356_004205"
                     /pseudo
     CDS             complement(951..1046)
                     /locus_tag="JQ356_004205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(1082..1387)
                     /gene="ccdB"
                     /locus_tag="JQ356_004206"
     CDS             complement(1082..1387)
                     /gene="ccdB"
                     /locus_tag="JQ356_004206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858358.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin CcdB"
                     /protein_id="HAY4624086.1"
                     /translation="MQFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSD
                     KVSRELYPVVHVGDESWRMMTTDMASVPIFVIGEEVADLSHRENDIKNAINLMFWGI"
     gene            complement(1389..1607)
                     /gene="ccdA"
                     /locus_tag="JQ356_004207"
     CDS             complement(1389..1607)
                     /gene="ccdA"
                     /locus_tag="JQ356_004207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin CcdA"
                     /protein_id="HAY4624087.1"
                     /translation="MKQRITVTIDSDSYQLLKSANVNISGLVNTAMQKEARRLRAERW
                     QAENQQGMAEIARFIEMNGSFADENRDW"
BASE COUNT          570 a          451 c          496 g          624 t
ORIGIN      
        1 gaagaggtta atctttgcag ggcttgcaga gcatgggatg ataatgggtt atcactaata
       61 tgtattgaac attcattcct cagattaaga atgctttccg ggatatgact tatctgattt
      121 ctatcaaaaa aatactctct gacaacggga ttatttccct cagaaaatgc tggtagctca
      181 gtgaggaaat tacgggtcgc tctgagattt ttaagagcct gtgggagcga tggtaaggag
      241 actatttcgt tatagctgat attcatagtc aataacgaat cgggtaaagc tggcaggttt
      301 tccagctcat tgtgttgtac ctgaagtgac tccagcgcag gaggtagcac gggcaattct
      361 gataatttat tgctggcgga atataatttt tttagcgtaa caggcagttc aggtaggtta
      421 gttaattgat tatatgatac attgagcagc gttatctgag ctggtaagtt gtcaggtagc
      481 gaggacagat ttaaacggtc cagtcgaagt tcatcggaat tattgataag acattcttta
      541 agtcgggaga cagcctcatc acgctcttca ccggggagcg cttgtttttc ccatttatcc
      601 catgctgaaa agtaatcagc atatgtaccg gaaatagtgt tataaaaaga attttggggc
      661 aatgaaaagt tattatttat cggtaacatg atgggcatcc agttaaagcc ggtggacaaa
      721 tggctttgtt aaaagaaata agcaggagtt tttatgaagt tcattccatg aaatgaactt
      781 cagcactttt ttattataat aaggataaac aaaattggct gtaaaaaaac gatactgttt
      841 cagttaaccg tgaatggcct gtttgcaccg tattgttctt gtttttcggt tagttaaaca
      901 tcgtacttca tatttgaacg gtaagcggct cgtcagaacc gtattgatat ttactgagag
      961 gtcagatcaa ctttccaggg caacagatcg cgtacccagt ttgccggcca gtcttggata
     1021 tgctcaatga cgtaacgcag ccattttgtc aacgccacga tttttgaccc tagcctgaca
     1081 tttatattcc ccagaacatc aggttaatgg cgtttttgat gtcattttcg cggtggctga
     1141 gatcagccac ttcttccccg ataacgaaga tcggcacact ggccatatca gtggtcatca
     1201 tgcgccagct ttcatccccg acatgcacca ccgggtaaag ctcacgggag actttatctg
     1261 acagcaggcg ggcactggcc agggggatca ccatccgtcg tccgggcgtg tcaataatgt
     1321 cactctgtac atccacaaac agacgataac gactctctct tttataggcg taaaccttaa
     1381 actgcatttc accagtccct gttctcatcg gcaaaagagc cgttcatttc aataaaacgg
     1441 gcgatctcag ccatcccctg ctgattttca gcctgccagc gttccgcacg cagacggcgg
     1501 gcctcttttt gcatggccgt atttaccagg cctgagatat tcacgtttgc ggatttaagt
     1561 aactgatagc tgtcactgtc tatagtgaca gtaatacgct gcttcatgat aagccctcaa
     1621 aaacatactt atgatatgta tatgagtata tattaatggt acaaaccatc aatatccata
     1681 aaaagtacac cattaattca ctataagttt ttaatacaat tttttctgct gcgatttttt
     1741 tatacgataa ttagcatact tataacaccg taagtaaatt acatgaaagc aggcacagcg
     1801 tgatccgatt tttctgcgta taacgatttt ccggaagtgt aatacggttg cgccccgggc
     1861 cgggcaccct tttctgttgt tgtgtacggg cccacagaga atggtaccgg aggcgggctc
     1921 agaagtactg agtcgggtga tcgcgtcagg ccgcgaagta ctgacacggg tattggtgac
     1981 tggtgatgaa gtactgcccc gggtatgatt tcaggctgat tcaggttctg attctctgtc
     2041 agtccgcgtg gttgctggcc tggctgattt cctgttgtca ggcgttcaac aaccgactgc
     2101 aggttatagc ccggttcacg aaccacggca gcctggcggc t
//
LOCUS       DADKRT010000310         2131 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.315, whole genome shotgun sequence.
ACCESSION   DADKRT010000310 DADKRT010000000
VERSION     DADKRT010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.315"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(98..223)
                     /locus_tag="JQ356_004208"
                     /pseudo
     CDS             complement(98..223)
                     /locus_tag="JQ356_004208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415772.1"
                     /note="receptor for colicin S4; incomplete; partial in the
                     middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
     gene            409..684
                     /locus_tag="JQ356_004209"
     CDS             409..684
                     /locus_tag="JQ356_004209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HAY4624088.1"
                     /translation="MTVFVLRGYIPHTTAKSVVGIGVSDNITTHSRVCGFFCVKHCHI
                     RIMVGRAGAEKSAPGFVMTGYANPVRLTTSLIGVRGGDHPINWSHHI"
     gene            681..1238
                     /locus_tag="JQ356_004210"
     CDS             681..1238
                     /locus_tag="JQ356_004210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001530027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HAY4624089.1"
                     /translation="MNTAITFSNESPKVFFKDGRLVTTSQAVADYFDKQHKHVLAKID
                     TLDCSPEFTSANFSADVQTVEIGNGAERESRCYLITKDGFMFLVMGFTGKKAARLKEA
                     YIEKFNAMEEELHKRPPAAQNSPAPNNGCALLIHFDKHGQVEFTEKVPADAMVCTLER
                     FKFYLEQHGWIVARKEQLVERLMRF"
     gene            complement(1650..1919)
                     /locus_tag="JQ356_004211"
     CDS             complement(1650..1919)
                     /locus_tag="JQ356_004211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000937495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4624090.1"
                     /translation="MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQD
                     AVDLEIATEEERSLLEAWNKYRVLLNRVDTSTAPDIEWPANPVRE"
BASE COUNT          582 a          513 c          440 g          596 t
ORIGIN      
        1 aatcaccatc atacactaaa tcagtaagtt ggcagcatta ccctttatgc catgtcctta
       61 ttgaccccgt atattacggg gtcgtttttg tgcggaatta aaaacgatat cctgctgaga
      121 acataaacac ccacggatcg aggcgtacgc tatcatgttg ctgtgcaccg cccagcttat
      181 aattggcggt ggtatcgata tccatgtacc agactgacat gttttaaaaa atgcaataag
      241 acattgtatc tgaaagaaaa aacaggattt tgaggcgctt ttttataccg tttttccgtg
      301 tttttaactg cctgatttta ttgaaatctt ttttagtttt gcagaaagga ttttttgctc
      361 gatcgcttta attttataca ttcctgataa cggaaatttt tttgcccgtt gacagttttt
      421 gttctccggg gctatattcc tcacacaacc gcaaaatcgg ttgtcgggat tggcgtctcg
      481 gataacatca caacgcatag ccgcgtttgc ggtttttttt gcgttaagca ttgccacatt
      541 cgcattatgg tggggcgtgc aggggcggag aaatccgcgc cgggttttgt gatgaccggt
      601 tacgccaacc ctgtacgtct caccacctcc ctgattggcg tcagaggtgg tgatcatcca
      661 attaattgga gtcatcacat atgaatacag ctataacttt ttctaacgag tcaccaaaag
      721 tctttttcaa agatggtcgc ctggttacca cctctcaagc tgttgccgac tacttcgata
      781 aacaacataa acacgtttta gctaagattg acacactcga ctgctctccc gaatttacat
      841 cagccaactt ttcggccgat gttcagactg tcgaaattgg caacggcgca gaacgtgaat
      901 cacgatgcta cctgatcaca aaagacggct tcatgttcct cgtaatggga tttactggca
      961 aaaaagcagc cagactaaaa gaagcttaca ttgaaaaatt taacgcaatg gaagaagaac
     1021 tccacaaacg tcctcctgca gcacaaaact cccccgcccc aaataatgga tgcgcattac
     1081 tgatccactt cgataaacac ggtcaggtcg agttcacaga aaaagtcccc gccgatgcga
     1141 tggtatgcac gctggaacgg tttaaatttt atctggagca acatgggtgg atcgttgccc
     1201 gtaaagaaca attggtggaa aggttgatgc ggttttaatg aatgcaaaac cccggatgat
     1261 caccggggtt aattttatcg agcgtgattg ccgctaatcg ccatcgctct gattgagcgt
     1321 aaatcattca ggttattcag ttcttccttc tgctctcgct gacgtcaata aatcccatca
     1381 ttgcgatcaa cctcatcctt aaccattgat gcgagcagtt cttccagttt ctgcgctgac
     1441 agctttacct ggtgatcttc agcatcttcc cgggctattg tggttcgcgc agtggctgat
     1501 tttgctgaca tcaccacagg gggcagacgg accattgaac catggcctcc ggaacaaata
     1561 agggcaaaaa taacaaccac tatcgaaagc tcacaaacta accgcagcac gttcctgcat
     1621 acgacgtgtc tgcggcataa tcccaatgat tactccctga caggatttgc aggccactca
     1681 atatcaggtg cagttgatgt atcaacacga ttcaacaata cccgatattt attccatgcc
     1741 tccagcaacg atctttcttc ctccgttgcg atttccagat ctacagcatc ctgcagtggc
     1801 gcaatatact cactgaattc ctggatgtag aactgtgtgg tgacggtctt ccagccattc
     1861 ggctcctgct gtatcgaagc ataccaggct atttcaatat cgctatgctg cggcagcatt
     1921 taaccccttg taattcatcg ccataattga tttaattcac aaataaaact ataacacggt
     1981 gaaatcaatg aaaaaaaaca cagatgatgg ggctaaaatt tacacaccac ttaccctaaa
     2041 gctttatgac tggtgggttt tgggagtatc aaatcggctt gcatggggat gtcctacaaa
     2101 ggaacacctt cttccacact ttctggaaca t
//
LOCUS       DADKRT010000311         2054 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.316, whole genome shotgun sequence.
ACCESSION   DADKRT010000311 DADKRT010000000
VERSION     DADKRT010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.316"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            72..422
                     /gene="tnpB"
                     /locus_tag="JQ356_004212"
     CDS             72..422
                     /gene="tnpB"
                     /locus_tag="JQ356_004212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY4624091.1"
                     /translation="MISLPSGTRIWLVAGITDMRKSFNGLGEQVQHVLNDNPFSGHLF
                     IFRGRRGDMIKILWADADGLCLFTRRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDW
                     RQPKTSRLNALTML"
     gene            453..2045
                     /locus_tag="JQ356_004213"
     CDS             453..2045
                     /locus_tag="JQ356_004213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY4624092.1"
                     /translation="MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKI
                     EEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQ
                     VPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLELVSSALK
                     VIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIF
                     ARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNSRKVHTDDTPVKVLAPGRKKAK
                     TGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLSPFRGILQADAFNGYDRLF
                     SAEREGGALTEAGCWAHARRKVHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSE
                     RLAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFSDDGLAEA
                     DNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSV
                     LPEWPSNRVDELLPWNVALTNK"
BASE COUNT          520 a          518 c          589 g          427 t
ORIGIN      
        1 aacatgacgc tggaaaatcc ttcaccagag ctgctcacag tgttgatccg tgaactgacc
       61 gggaggggac gatgatctca ctcccgtcag gcacccgcat ctggctcgtt gctgggataa
      121 ccgatatgcg taagtctttc aacgggctgg gtgaacaggt acagcatgtg ctgaatgata
      181 atcccttctc cggtcacctg ttcatcttcc gtggccgacg gggtgacatg attaaaatcc
      241 tgtgggctga tgctgatggt ctgtgcctgt tcaccagacg cctggaggaa ggccagttta
      301 tctggcctgc tgtgcgtgac ggcaaggtat ccattacccg ctcgcaactg gcaatgctcc
      361 tcgataagct ggactggcgt cagccaaaaa catcccgcct taatgcactg acaatgttgt
      421 aaaaatgtca tggccggatt ataaaaacgg ccatgaatca aaaatacctc attcgcattg
      481 cagaactgga atgccagctc cgtcagaaag accagcaact gagtctggtt gaagagacgg
      541 aggccttcct gcgctctgca ctggcccgcg ccgaagaaaa gatcgaagaa gatgaacggg
      601 aaatagaaca tctgcgggct cagatagaaa aactgcgccg gatgctgttc ggtacccgtt
      661 ctgaaaaact gcgtcgtgaa gttgaacagg ctgaggccct gctgaaacaa cgcgaacagg
      721 acagtgatcg ttacagtggg cgggaagacg atccgcaggt tccccgccag ttgcgacagt
      781 ctcgtcatcg tcgcccgtta ccggagcatc tgccccgcga aataaatcgc ctggagccag
      841 aagaaagctg ttgcccggag tgtggcggtg agctggatta tctgggggaa gtcagcgcag
      901 aacaactgga actggtgagc agcgctctga aagtgatccg cacagaacgg gtaaaaaaag
      961 cctgtacaaa atgtgactgc atcgttgaag caccggcacc atcccgtccg atagagcgtg
     1021 gtatcgcggg cccggggtta cttgcccgcg tgttaacggg aaaatactgc gaacacctgc
     1081 cactgtatcg tcagagtgaa atttttgccc gtcagggtgt cgaactgagc cgtgcattac
     1141 tctccaactg ggttgacgcg tgctgccagt taatgacgcc gctgaatgat gctctgtacc
     1201 gttatgtaat gaacagccgc aaagttcaca ctgatgacac accagtaaaa gtgctggcac
     1261 cgggcaggaa gaaggcgaaa acaggatata tctggacgta tgtccgggat gacaggaatg
     1321 ccggttcgcc agagcctccg gcggtctggt tcgcctactc accggaccat cagggtaaac
     1381 atccggagca gcaccttagt cccttccggg gtatcctgca ggcagatgcg tttaatggtt
     1441 acgatcggct gttcagtgcc gaacgagaag gcggcgcgtt gacggaagca ggatgctggg
     1501 ctcatgcgcg gcgcaaagtc cacgatgtat atatcagtac caaaagcgcg acagcggaag
     1561 aagccctgaa actaatcggt gagctgtacg ccatcgagca cgaaatacgc gggttgccgg
     1621 tgtctgaacg cctggcggtc aggcaaatgc agagtaaacc gctactgact tccctgtata
     1681 agctgatgca ggagaaagaa cacacgttat cgaaaaaatg ccgtctgaga gatgcgttcc
     1741 ggtatatcag gaagcactgg gttgcgttgt gcaacttcag tgatgatggt ctggctgagg
     1801 cggataataa tgccgcggaa agagcgcttc gtgcagtctg tctcggaaag aaaaacttta
     1861 tgttcttcgg cagcgatcac ggtggagagc gtggtgcgct actgtacggg ctgatcggca
     1921 cctgccgact gaacggtatc gatccggaag cgtatctgcg ctatatcctg agcgtactgc
     1981 cggaatggcc ttccaaccgt gttgacgaac tcctgccatg gaacgtagca ctcaccaata
     2041 aataagcgtc aata
//
LOCUS       DADKRT010000312         2009 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.317, whole genome shotgun sequence.
ACCESSION   DADKRT010000312 DADKRT010000000
VERSION     DADKRT010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.317"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1986
                     /gene="yicI"
                     /locus_tag="JQ356_004214"
     CDS             <1..1986
                     /gene="yicI"
                     /locus_tag="JQ356_004214"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HAY4624093.1"
                     /translation="FKSGNLSARVSKGEFWSLDFLRNGERITGQDTNNQRNYMFERLD
                     LGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHP
                     QSVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGL
                     WLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPE
                     GMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIY
                     DFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAHIYN
                     ELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLS
                     GFGFWSHYIGGFENTAPAHVYKCWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRF
                     FTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPV
                     FTEAGDVQFYLPEGRWTHLWHNDELDGRCWHKQQHSFLSLPIYVRDNTLLALGNNDQR
                     PDYAWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWT
                     LCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL"
BASE COUNT          460 a          483 c          573 g          493 t
ORIGIN      
        1 tttaaaagtg gcaacttaag cgcgcgtgtc agcaaaggtg agttctggtc actcgatttt
       61 ctgcgcaacg gtgaacgtat taccggtcag gacacgaata atcaacgaaa ttatatgttt
      121 gagcggcttg atcttggcgt tggcgaaaca gtttatggtc tgggagagcg ttttactgcc
      181 ctggtgcgca atggtcagac ggtagagacc tggaaccggg acggcggcac aagtactgaa
      241 caggcgtata aaaatatccc gttctatatg actaaccgtg gctatggggt gctggtcaat
      301 cacccccaga gtgtctcttt tgaagtggga tcggagaaag tctccaaagt gcagttcagc
      361 gttgagagcg aatatctcga atactttgtt atcgacggtc cgacgccgaa agcggtactt
      421 gatcgttata cccgttttac tggtcgtccg gcgctgccgc ccgcatggtc cttcggcctg
      481 tggctaacca cttcatttac caccaactac gacgaagcga cggtaaacag ctttatcgat
      541 ggtatggcgg aacgcaatct gccgctgcat gttttccact ttgactgttt ctggatgaaa
      601 gccttccagt ggtgcgattt tgagtgggac ccgctgactt tcccggaccc ggaagggatg
      661 atccgccgcc tgaaagcgaa agggctgaaa atctgcgtct ggattaaccc ctatatcggt
      721 caaaaatccc ccgtctttaa agagttacaa gagaaaggct atttactcaa acgcccggac
      781 ggttcgctat ggcagtggga taaatggcag ccaggtctgg cgatttatga ctttaccaat
      841 ccggatgcct gcaaatggta cgccgacaaa ctgaaaggtc tggtcgcgat gggcgttgat
      901 tgctttaaga ccgactttgg cgaacgtatc ccaactgatg ttcagtggtt tgacggttcc
      961 gatccgcaga aaatgcataa ccattatgcg cacatctaca acgaactggt gtggaacgtg
     1021 ctcaaggaca ccgttggtga ggaagaagct gtcttgtttg cccgctcggc ctccgtcggt
     1081 gcgcagaaat tcccggtaca ctggggtggc gattgttacg ctaactacga atcaatggcg
     1141 gaaagcctgc gcggtggttt gtctattggc ctttcaggtt ttggcttctg gagccactat
     1201 atcggcggct ttgaaaatac cgctccggcg cacgtttaca aatgctggtg cgcgtttggt
     1261 ttgctctcca gccatagccg tttacacggt agcaaatctt atcgtgtgcc gtgggcctac
     1321 gatgatgagt cctgtgatgt ggtgcgcttc ttcacgcaac tgaaatgccg catgatgccg
     1381 tatctgtatc gtgaagctgc gcgtgcaaac gcgcggggta cgccgatgat gcgggccatg
     1441 atgatggagt tcccggacga tccggcttgt gattaccttg accgtcaata catgttaggc
     1501 gacaacgtga tggttgcgcc ggtgttcact gaagcgggcg atgtgcagtt ctacctgccg
     1561 gaaggtcgct ggacacacct gtggcacaac gatgagctcg acggtcgttg ctggcataaa
     1621 cagcagcaca gcttcctgag tctgcccatt tatgtgcgtg ataacaccct actggcgctg
     1681 ggcaacaacg atcaacgtcc cgattacgcg tggcacgaag gcacggcatt ccacctcttt
     1741 aatctgcaag acgggcatga agccgtctgt gaagtgcccg ctgctgacgg atcggtgatc
     1801 tttactttaa aagcagcacg tactggcaac acgattactg tgactggtgc gggcgaggcg
     1861 aagaactgga cactgtgcct gcgcaatgtt gtgaaagtaa atggtctgca agacggttcg
     1921 caggctgaaa gtgagcaggg gctggtggtg aagcctcaag ggaatgcgct gacaattacg
     1981 ttgtaatcta ttgatggaat gccgggtac
//
LOCUS       DADKRT010000313         1954 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.318, whole genome shotgun sequence.
ACCESSION   DADKRT010000313 DADKRT010000000
VERSION     DADKRT010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.318"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..263)
                     /locus_tag="JQ356_004215"
     CDS             complement(<1..263)
                     /locus_tag="JQ356_004215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624094.1"
                     /translation="MRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRN
                     LPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLR"
     gene            complement(265..543)
                     /locus_tag="JQ356_004216"
     CDS             complement(265..543)
                     /locus_tag="JQ356_004216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624095.1"
                     /translation="MAHDTKFYNSDNSAAPASRHGRRSHAFKSDWYQHDPCTEEQAEW
                     LIQRYRRHGYEIKKALSLDYRHWIIFVRLPYSERPPRPSCTFQQRIWR"
     gene            484..669
                     /locus_tag="JQ356_004217"
     CDS             484..669
                     /locus_tag="JQ356_004217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624096.1"
                     /translation="MPAGRRGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQ
                     KKQNPPKRVKCGCVEDA"
     gene            complement(711..923)
                     /locus_tag="JQ356_004218"
     CDS             complement(711..923)
                     /locus_tag="JQ356_004218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY4624097.1"
                     /translation="MLNTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFTAYEPEE"
     gene            complement(1126..1344)
                     /locus_tag="JQ356_004219"
     CDS             complement(1126..1344)
                     /locus_tag="JQ356_004219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624098.1"
                     /translation="MFKCYCTLIVGGIMKNALQFLFVAFWLFASCMPIIFTARYMEKI
                     DVLILMFGHINALFLGVFMAVMCIEYWR"
     gene            complement(1518..1853)
                     /locus_tag="JQ356_004220"
     CDS             complement(1518..1853)
                     /locus_tag="JQ356_004220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707879.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624099.1"
                     /translation="MARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDW
                     KYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKAVHFYEQLKRENPPASGNQINGL
                     TMSVKRPAN"
BASE COUNT          482 a          508 c          434 g          530 t
ORIGIN      
        1 cgcaacagcc agtcagacaa tgcaccagca ccaccagcag cacgaatcac ccgtgcgtta
       61 ctgaaaaacg gcagcaatgt tttgtcttcc actagcggct ggcgaacggc aggaacgacc
      121 ccggacggca gattacgcat gcttttcggt tccggctcca ccagtacccg ggtattgtgg
      181 aataccggca tggattcacg gcctggctta aggaccacca gcccgagttc cggaaccaga
      241 acaggtcgaa gtaatacccg cacattacct ccagatccgt tgctggaatg tgcaggacgg
      301 acgcggtggc cgttcggaat aagggagcct gacgaagatt atccagtgac gataatcgag
      361 actgagggct ttcttaatct cgtatccgtg tctgcggtag cgctgaatca gccattcagc
      421 ctgttcttcg gtgcaggggt cgtgctgata ccagtcagat ttgaatgcat gagaacgccg
      481 cccgtgcctg ctggcaggcg cggcagagtt atccgaattg taaaatttgg tatcgtgcgc
      541 catctgtttt ctctgctggc gcagcaggtg ccagttgttc aggctgacgg atggattgta
      601 aaccagaacg accagaaaaa acaaaacccg ccgaagcggg ttaagtgcgg gtgcgttgag
      661 gatgcctgac acatcagcgg tggcgaggga tttctccccc gccgggtctc ttactcctca
      721 ggttcgtaag ctgtgaagac agcgacctcc gtctggccgg ttcggattcg tacctcgcag
      781 aggtctttcc tcgttaccag tgccgtcact atgacggtta aacagatgac gataagggcg
      841 attaacatcg ccttttgctg cttcatagcc tgcttctcct tgcctttcgg cacgtaagag
      901 gctaacctac atgtgttcag catggattga gcctcagatt aatgttaagc gtcttgcagg
      961 acgcgtagtg ttaactgggg cttttctcta tctgcctttt ggtgttcatg cctgagacag
     1021 atagcctcaa gcacccgcag tcattctact taactaagat ttccctgcaa accgtttttg
     1081 tccggcacag taaatatcca actaaaccaa tagcgttcgc tgtatttacc gccagtattc
     1141 aatgcacatg accgccatga acacccctaa aaaaagggca tttatatgtc caaacattaa
     1201 tatcaaaaca tcaatttttt ccatatacct tgctgtgaag atgatgggca tacatgatgc
     1261 gaacaaccag aacgcaacaa acaaaaactg caatgcgttt ttcattattc cccctacaat
     1321 caatgtgcaa taacatttaa acacacctca atttggccgg acatataaat atctaaacca
     1381 gaaaaaatca cttacatagc gttacaaact ctttagtcta aatactcatc gtaaaacatt
     1441 ccccatactt atcagtccgt tccgcgccag gtagcttatt gccttatctg gcaacctata
     1501 atcaggtttc cgctttttca gttggctggt cgtttaaccg acatagttaa cccattaatc
     1561 tggttgccgg atgctggtgg attttcgcgt tttagttgtt cataaaagtg cacagcttta
     1621 accagttctt ctgatgtaac cgggactggt ggggcagtga ataaggcctg aatttcatag
     1681 ttcggcctgt cgttacaatc ctcttttttc ggtacatatt tccagtcacc aacccacaac
     1741 tccccctgag agtccataac accttttttc acgtagcgat atcgccacgc tatcggctct
     1801 gcttccagcg atgcccgtgc aattttgaat aactcgccct ctactcgcgc catccctgaa
     1861 ttggggtggc atttcgtaat cgctattttt aatttggctt cttcgattaa ttgttctttt
     1921 gttaattcag tcattttcat taccgccctt tcag
//
LOCUS       DADKRT010000314         1934 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.319, whole genome shotgun sequence.
ACCESSION   DADKRT010000314 DADKRT010000000
VERSION     DADKRT010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.319"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            368..1156
                     /gene="virF"
                     /locus_tag="JQ356_004221"
     CDS             368..1156
                     /gene="virF"
                     /locus_tag="JQ356_004221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858179.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family invasion system transcriptional
                     regulator VirF"
                     /protein_id="HAY4624100.1"
                     /translation="MMDMGHKNKIDIKVRLHNYIILYAKRCSMTVSSGNETLTIDEGQ
                     IAFIERNIQINVSIKKSDSINPFEIISLDRNLLLSIIRIMEPIYSFQHSYSEEKRGLN
                     KKIFLLSEEEVSIDLFKSIKEMPFGKRKIYSLACLLSAVSDEEALYTSISIASSLSFS
                     DQIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLL
                     LNSQSYINDVSRLIGISSPSYFIRKFNEYYGITPKKFYLYHKKF"
     gene            complement(1098..1508)
                     /locus_tag="JQ356_004222"
     CDS             complement(1098..1508)
                     /locus_tag="JQ356_004222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY4624101.1"
                     /translation="MPFHRPTKWVQYISAAPALSQQAVDQEWSYMDFLEHLLHEEKLA
                     RHQRKQAMYTRMAAFPAVKTFEEYDFTFATRAPQKQLQSLRSLSFIERNENIVLLGPS
                     GVGKTHLAIAMGYEAFKIFYDISKISLELYHNIH"
     gene            1519..1934
                     /locus_tag="JQ356_004223"
                     /pseudo
     CDS             1519..1934
                     /locus_tag="JQ356_004223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611947.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          608 a          347 c          386 g          593 t
ORIGIN      
        1 aatatcaaca ccaaccggat ttgtggagcc tccagtctga aggggcttta tgcgttccgt
       61 ataggatatt atgatgctgg agttttgcga agctccactc ctttccgaac atttacacag
      121 atattgccta agaaaagtga aaccataata tggttatagt ccctttcagt gcaaatactt
      181 agcttgttgc acagagaaat agaagctgca taagctcttt cttcaaaaaa tgtaaataaa
      241 gttaaatata ggaaaaatta cttaatctat cttaataacg gaaagatttt gtatacaatc
      301 actgttacag aaatttctta gttactctgt aaacactaaa tatagtttgg tatattctgt
      361 tgaatttatg atggatatgg gacataaaaa caaaatagat ataaaggttc gcttgcataa
      421 ctatattatt ttatatgcaa aaaggtgttc aatgacggtt agctcaggca atgaaacttt
      481 gactatcgat gaagggcaaa ttgcttttat agagcgaaat atacaaataa acgtctccat
      541 aaaaaaatct gatagcatta atccatttga gattataagc cttgacagaa atttattatt
      601 aagcattatt agaataatgg aaccaattta ttcatttcaa cactcctatt ctgaggagaa
      661 aagggggtta aacaaaaaaa tattcctcct ctctgaggag gaggtttcta tcgatttgtt
      721 caaatctata aaagagatgc cttttggcaa aagaaagatc tatagtttag cttgcctttt
      781 atcagctgtt tctgatgagg aagctttata tacttcgata tcgatagctt cttctcttag
      841 tttttctgat cagataagga agattgttga aaaaaacatc gagaagagat ggcgtctttc
      901 tgatatttca aataacttga atttatcaga aatagctgtt agaaaacgat tggagagtga
      961 aaaattaaca tttcaacaaa tccttcttga tattcgcatg catcatgcag caaagctttt
     1021 attgaatagt caaagctata ttaatgatgt atcaagactt atcggaatat caagcccatc
     1081 ttattttata aggaaattta atgaatatta tggtataact ccaaagaaat tttacttata
     1141 tcataaaaaa ttttaaatgc ttcatagccc atcgctattg ccagatgggt tttccccaca
     1201 cctgatggcc ctagtaatac gatattttca ttacgttcta tgaagctgag tgagcgtaac
     1261 gactggagtt gcttctgcgg tgctctggtg gcgaatgtga agtcatactc ttcgaacgtt
     1321 ttcaccgccg ggaaggctgc cattcgggta tacatcgcct gtttacgttg atgacgtgcc
     1381 agtttttctt catgaagcag atgctccagg aagtccatat aactccattc ctggtctact
     1441 gcctgttgtg acagcgcagg cgctgcgctt atgtactgca cccattttgt tggacgatga
     1501 aatggaatag cccctaatat gtcaaagcca aaataccctt ttgaaaagcg ccttgaagtc
     1561 gtgaatcact acttcactac tgatgatggt tacaggatca tctcggcacg ttttggtgtc
     1621 cccgaaccca ggtcaggaca tgggttgccc tctatgaaaa acatggagaa aaaggcttaa
     1681 ttcccaaacc taaaggtgtt agtgctgatc cagagttgcg tattaaggtc gtgaaagctg
     1741 tgattgagca gcacatgtcc cttaatcagg ctgctgctca ctttatgctt gctggtagtg
     1801 gttctgtagc caggtggctg aaggtttatg aagagcgcgg agaagctggt ttacgcgcgc
     1861 tcaagattgg caccaaaaga aacattgcaa tatcagttga tccagaaaaa gcggcatcag
     1921 cattggagct gtca
//
LOCUS       DADKRT010000315         1906 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.320, whole genome shotgun sequence.
ACCESSION   DADKRT010000315 DADKRT010000000
VERSION     DADKRT010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.320"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(81..191)
                     /locus_tag="JQ356_004224"
                     /pseudo
     CDS             complement(81..191)
                     /locus_tag="JQ356_004224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415081.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
     gene            complement(191..790)
                     /locus_tag="JQ356_004225"
     CDS             complement(191..790)
                     /locus_tag="JQ356_004225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HAY4624102.1"
                     /translation="MAHIQLIKQTSSGLLLPATPESCDFLHQIKTGEWIHADFKRVRN
                     YAFHKRFFKLLQLGFDYWTPIGGAITPRERELVSGFVEYLCESVGREHTPALSEAAEQ
                     YLNTVATRRTRDTALLKSFEAFREWVTIQAGFYTEHIYPDGSRGRRAKSISFANMDET
                     EFQQVYKSVLNVLWNWILFRKFSSPEQVENVAAQLLEFA"
     gene            complement(829..1116)
                     /locus_tag="JQ356_004226"
     CDS             complement(829..1116)
                     /locus_tag="JQ356_004226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624103.1"
                     /translation="MKIEELREIFSENGLYAVRVENGAIVSHCRIRCLQSQQRKSGAV
                     LFYFCNGLLTDGFILREDEFVTSLRVLKEIGFKAGFLLLLKNKLIYNLEQD"
     gene            complement(1366..1578)
                     /locus_tag="JQ356_004227"
     CDS             complement(1366..1578)
                     /locus_tag="JQ356_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY4624104.1"
                     /translation="MLCTCRLASYMPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFVDYESRK"
     gene            1623..1806
                     /locus_tag="JQ356_004228"
                     /pseudo
     CDS             1623..1806
                     /locus_tag="JQ356_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_303812.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1763..>1906)
                     /locus_tag="JQ356_004229"
     CDS             complement(1763..>1906)
                     /locus_tag="JQ356_004229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624105.1"
                     /translation="ISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKE
                     EKE"
BASE COUNT          476 a          500 c          428 g          502 t
ORIGIN      
        1 ttctccagat ttcttgcgtg cgaaaaacac cttctgcatg catcaggcgt aattcttctt
       61 tggtgtaatc gcttgttttt acccgccagt cggtaatgcg ccagcacaga cgtttccgga
      121 tcgtgattgc agtagccagg aattctgacg gtgcacatct gcccccgcgc cgctttacgt
      181 aaatccacca ttacgcaaac tccagtagct gcgcggccac attttcgact tgttccggag
      241 aggaaaattt acggaacagg atccagttcc acagtacatt cagcacagat ttataaacct
      301 gctgaaactc ggtttcgtcc atattcgcaa acgagatgga tttcgccctg cgcccacggc
      361 taccgtccgg ataaatatgc tcggtgtaaa atccggcctg aatggttacc cactcgcgga
      421 aagcctcaaa cgactttagc aatgctgtat ctcgggttct gcgtgtcgca actgtattca
      481 gatattgctc tgcggcttcg ctcagagctg gcgtatgttc ccggcctact gattcgcaca
      541 ggtactcaac gaagcctgat accagttctc gttcgcgagg cgtaatcgcc ccaccgatcg
      601 gagtccagta atcgaatccc agttgcagga gtttgaaaaa acgcttgtgg aatgcgtagt
      661 tacgcacacg cttaaagtct gcgtgtatcc actcacctgt tttgatttga tgcagaaaat
      721 cgcaactctc cggcgtcgcc gggagaagta atccggaaga ggtttgtttg atcagttgta
      781 tatgcgccat cggctttctc cggtggcacg gtgttacaca gcaggagttc aatcctgctc
      841 aagattgtag atgagtttat tcttcagcaa aagcagaaaa ccagccttaa aaccaatctc
      901 tttcaaaacc cgtaatgatg tgacaaattc gtcctcacgc aaaataaaac cgtccgtcag
      961 aagtccatta caaaaataaa ataacacagc accgctcttc ctttgttgag attgcaaaca
     1021 tctaatgcgg caatggctga caatcgctcc attctcaacg cgcacagcat agaggccatt
     1081 ttcactaaaa atttcacgca attcttcgat tttcatcttc agaatccttc cagataaata
     1141 gctctcccct gttcggggtc catccctctt ctccctgcgc gctacttaag tgagtcgatt
     1201 ctatctgcga aggtgcgcga atcaaattca ccggaaataa acaacaaaaa acccgccgaa
     1261 acgctgagag atcacagcga tgggcgggtt aagtgcgggt gcgttgagga tgcctgacac
     1321 atcagaggtg ggcggggatg ggatcagctc cccgcccggt cactcttact tcctggattc
     1381 gtagtctacg aagacagcga cctccgtctg gccggttcgg attcgtacct cacagaggtc
     1441 tttcctcgtt accagtgccg tcactatgac ggttaaacag atgacgatca gggcgattaa
     1501 catcgccttt tgctgcttca tagcctgctt ctccttgcct ttcggcatgt aagaggctaa
     1561 cctacatgtg caaagcatga aattggcctc agattaatgt taagcgtctt gccggacgcg
     1621 taatgttaac tggggctttt ctctatctgc cttttggtgt tcatgcctga agcagatagc
     1681 ctgaagcaga tagcctcaag cacccgcagt cattctactt acctcgccaa tatgaaatca
     1741 atcagaaagg tgccccataa aatcactcct tctcttcttt accgtagtgg agttgaccaa
     1801 ttttgataag agggcgtccc tgagatttgc ggtgtagatt ggtatcgcgc agagaataca
     1861 cacagccaca atattcctgc tgatagaatt tttcgcgctt gctgat
//
LOCUS       DADKRT010000316         1904 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.321, whole genome shotgun sequence.
ACCESSION   DADKRT010000316 DADKRT010000000
VERSION     DADKRT010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.321"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(49..921)
                     /locus_tag="JQ356_004230"
                     /pseudo
     CDS             complement(49..921)
                     /locus_tag="JQ356_004230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417258.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
     gene            complement(935..1075)
                     /locus_tag="JQ356_004231"
     CDS             complement(935..1075)
                     /locus_tag="JQ356_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624106.1"
                     /translation="MSEENKENGFNHVKTFTKIIFIFSVSVFNDNESKITDAAVNLFI
                     QI"
     gene            1214..1885
                     /gene="queE"
                     /locus_tag="JQ356_004232"
     CDS             1214..1885
                     /gene="queE"
                     /locus_tag="JQ356_004232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HAY4624107.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
                     PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKH
                     PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
BASE COUNT          563 a          389 c          423 g          529 t
ORIGIN      
        1 taactgactg gcattacagc ctccgggatg gcatttttta tggttgagtt accagcggcc
       61 ggatgcgccg ccacctccag aagaaccgcc accgccgcta aatccgccgc cacttgagcc
      121 tccaccggaa ccgctgttgt ctgaatgata acttttacct gatgctcttt tctgaagtac
      181 acataaacag gtaaagacca taaatatggt gaaagtaaaa aagaaggaaa atacagcaat
      241 ggaaaaaatt ttatcggaga acaggaataa atctaaaaga tagattgctg aaatacagac
      301 tccactttta catgcgcgac aaaaattact gccttgatga aaaaaccaga aagggaagaa
      361 catcactgca aatacccaaa aaatagcaaa gtaataatga tcactggaag acgctgattc
      421 actttctgaa ggattagtcg gatattggtg ttgtgaagtg agttggttat tcaaagcgtt
      481 tatagctagc tctaatccct gagcaaattt ttgttgttta aatgcgggta tcatgttgct
      541 acggatgata tctccagcca gagcatcggt taccttttct tccagcccat aacctacctg
      601 gatgcggaca gtacgatctg accaggcaac aatgatcagt atcccatcat tacgtttggc
      661 atctcctaaa cgccaattgt caaaaactct tgtagcatat tgttcaattg tctcgtcttt
      721 ggttgtggga acaattaata cagcaatttg cacttgggta ttattgaaaa tagattctaa
      781 cttgtgcgtc agttctttct tttcttgtga gtttaagcta ctcgtaagat ccgtaacttg
      841 ttactgtaat tgtgggacaa tagttggttg ggctgcaaca aaggaacata cgaaagtgaa
      901 cattagtatg aaatagcgca ttataaattt ctcattaaat ctggataaat aaattgacgg
      961 cggcatcggt aattttagac tcgttatcat taaaaactga tacagaaaaa ataaatataa
     1021 ttttggtgaa tgttttgaca tgattaaatc cattttcttt attttcttct gacataatac
     1081 gttactccct ttaattatta acgatatgtt tcgcattttt ctttaaatct gcatgtaaca
     1141 gaatgttaat aaggcatgat tgttgcggca ggatctgcaa taattaacaa ttatccactt
     1201 cacagagaat gctatgcagt acccgattaa cgagatgttc cagaccctgc aaggtgaggg
     1261 ttactttacc ggcgtccccg ccatttttat tcgtttacag ggatgcccgg ttggctgtgc
     1321 ctggtgcgac accaaacaca cctgggaaaa gcttgaggat cgggaagtct cccttttcag
     1381 cattctggcg aagaccaaag agagtgataa gtggggggcg gcgagcagtg aagatttgct
     1441 ggctgtcatt ggtcggcagg gatataccgc gcggcatgtg gtgattacgg gtggtgagcc
     1501 ttgcattcat gatttgctgc cactgactga cctgctcgaa aagaacggtt ttagctgcca
     1561 gatcgaaacc agtggaactc atgaagtacg ctgcacaccg aatacctggg ttaccgtatc
     1621 gccaaagctg aacatgcgcg gcggctatga cgtgttgtca caggcactgg agcgagccaa
     1681 cgaaatcaag catccagtgg ggcgcgtacg cgatattgaa gcactcgatg aactattggc
     1741 aacgctgacc gatgataaac cgcgagtcat tgcactgcag ccgattagcc aaaaggatga
     1801 tgccacacgt ttgtgcattg aaacctgcat tgcgcgtaat tggcgtttgt cgatgcaaac
     1861 acataaatat ctaaatattg cctgattaaa catttataag cgtt
//
LOCUS       DADKRT010000317         1816 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.322, whole genome shotgun sequence.
ACCESSION   DADKRT010000317 DADKRT010000000
VERSION     DADKRT010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.322"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(316..1464)
                     /locus_tag="JQ356_004233"
     CDS             complement(316..1464)
                     /locus_tag="JQ356_004233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4624108.1"
                     /translation="MSTYTRPVMLLLSGLLLLTLAIAALNTLVPLWLAQEHMSTWQVG
                     VVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRF
                     VAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSV
                     LPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGS
                     LYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWSIGRLADKFGRLLVLRVQVFVVI
                     LGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS
                     LLGPSFTAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV"
BASE COUNT          573 a          464 c          396 g          383 t
ORIGIN      
        1 ggttggcgta gttattaaca acgttgccaa aaccccagac agtgataaaa gacatcagcg
       61 caatgttgta ccatcgcagc tgtttttcct gaacattccc agccatagac aaatccttcg
      121 ccaaaattat aggggcatct gtaaaacgag ggattatgcg cggcaaataa gaagtgcgga
      181 aatagcgaaa tgcaaaatta taacctgctg cacattttat ttttaaacga ataaaatttg
      241 gaataaagca agtcagatag aagaaacaaa aaagcagagt gtgaaacagt aagttcacac
      301 tctgcttgaa ttcatttaca cgtgagcaac gggtttcggc gtatgaccgg cgttgcgcag
      361 cagcatcagc aaatagataa acgatacgct ggcgatcatg ataaacaata aattatcgga
      421 gaaattctgc attagcatag cggtaaatga cgggccaagc agacttccca cagtatagct
      481 caacagtaag gcctggttca tcgccaccag ttgatgatgt tcaactttct cgcaagccca
      541 tgccatcgcc accggatata gcgtaaagcc agcggcaccg aggatgaata acgctggggc
      601 catcgccgcc tggctaagca tcgcgatact gccgagaatg acgacaaaga cctgaacacg
      661 caacaccagc agtcgaccaa acttatccgc cagacgtcca atcgaccatt gtccaaggat
      721 acccgcactg accagtaccg ccatccagaa accaatgctg gcattgctca cccctttgtg
      781 attgaggtac agcggcatca ggccatatag agatcccaga acgattcctg agataatgca
      841 gccattcacg ccaagccgcg cctgacggag ttttagcatt gacgtaattg acgtcgaatc
      901 atggttttca gcctgctgat tcagcacacg cgtaaacaac agcggtaaga tccctgccaa
      961 cgtcaaacct gtaacccacg gcaatacgga catcagctcg gttgaaactt tgctgaccag
     1021 taactggcct aaaaacgttc ccacgtaata aaccatcata tacgcagcaa gcaaacgccc
     1081 acggttacgt gacgtcccac tgcacatcag cgcgctctca acaaccaccc aaatcatggc
     1141 acagccgacg cccgcgacaa aacgccaagc caaccagctc cagaatccaa tcatcaggcc
     1201 aaggccggca cagccagcgg caaaaatgaa ggaggccaga taatagctgc ggttaaagcc
     1261 aatgcgctta atgacatacc ctgtcagcaa tgtaccgaca aggttgccgg taaaatagga
     1321 tgagctgaca acgcctacct gccatgtgga catgtgttcc tgggcgagcc aaagcggcac
     1381 gagtgtattt aacgccgcaa tcgccagagt caacaaaagc aggccagaca gcaaaagcat
     1441 gacaggccgg gtatacgtgg acatgaatta aaaccgtgag gaagttcaaa tttcatgcgc
     1501 atcatgccac cgccaaaaca ttgtcaatga gtgaaaatac gcgatatccc agcggcggta
     1561 ttatcgattt atattactca ttcataacgc taatgctgaa gagatgatta gtctcatctg
     1621 attgttttta ttgaactaac acaaatttca tacgcttcgt tcagtcgaaa aatttcatgg
     1681 tcacagcaaa ctcatatttc ccgtctatgc tttcagagca atgcatcgcg tctgatcgat
     1741 ttcagacgta ccactgactc tcgaaaggag aagaggatga ccaaaccgta tgttcgtctt
     1801 gataaaaatg atactg
//
LOCUS       DADKRT010000318         1764 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.323, whole genome shotgun sequence.
ACCESSION   DADKRT010000318 DADKRT010000000
VERSION     DADKRT010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.323"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..278
                     /locus_tag="JQ356_004234"
     CDS             <1..278
                     /locus_tag="JQ356_004234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309007.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
                     /protein_id="HAY4624109.1"
                     /translation="QYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDEL
                     RKKHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            280..1143
                     /locus_tag="JQ356_004235"
     CDS             280..1143
                     /locus_tag="JQ356_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HAY4624110.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
                     LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF
                     MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAA
                     LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            complement(1178..1759)
                     /locus_tag="JQ356_004236"
     CDS             complement(1178..1759)
                     /locus_tag="JQ356_004236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY4624111.1"
                     /translation="MLVDHQAGLLSLVRDIEPDKFKNNVLALGDQAKYFNLPTILTTS
                     FETGPNGPLVPELKAQFPDAPYIAHPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEV
                     CVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRD
                     WHNDIEGLATLFSNHIPDYRNLMTCYDTLTKQK"
BASE COUNT          379 a          424 c          491 g          470 t
ORIGIN      
        1 cgcaatataa cgaaacgaaa ggccatatga ccaaatgcga tggttgttat gaccgtgttg
       61 cggagggtaa aaagccgatc tgtgttgaat cttgtccgct gcgggcgctg gatttcggcc
      121 ctatcgacga gctgcgtaaa aaacatggcg atctggcggc cgttgcgccg ttgccgcgag
      181 ctcactttac caaaccgaat attgtgatca aacccaatgc caatagccgc ccgaccgggg
      241 ataccactgg ctatctggca aacccgaagg aggtgtgaga tgggaagtgg atggcatgaa
      301 tggccgctga tgatcttcac ggtcttcggg caatgtgtag caggtggttt tatcgttctg
      361 gctttggcgc tgctcaaagg cgacctgcga gcagaagccc agcagcgtgt tatcgcctgc
      421 atgtttggtt tatgggtgct gatgggcatt ggctttatcg cctctatgct ccatcttggt
      481 tcaccaatgc gcgcttttaa ctcgctcaac cgggtagggg cttcagcact cagtaacgaa
      541 atcgccagcg gttcgatctt ttttgccgta ggcggcatcg gctggttgct ggcaatgctg
      601 aaaaagctgt caccggcatt gcgtacgctg tggctgatag tgacgatggt tcttggcgtc
      661 atctttgtct ggatgatggt gcgtgtgtat aacagcattg ataccgttcc gacctggtac
      721 agcatctgga cgccgatggg cttcttcctg acgatgttta tgggcggccc gttactgggt
      781 tacctgttgt tgagtctggc tggcgtcgat ggctgggcga tgcgtctgct gccagcaatt
      841 tctgtactgg cactggtagt gagtggcgtg gtgtcagtga tgcagggcgc agagctggcg
      901 actattcata gttctgtgca gcaggccgca gcgctggtgc cggactatgg tgcgctgatg
      961 tcctggcgga tcgtgctttt ggccgttgcc ctgtgcttgt ggattgcacc acagctaaaa
     1021 ggttatcagc ctgcggttcc gctactttct gtatcattca ttctgcttct ggcaggggaa
     1081 ttaatcggtc gcggcgtatt ctatggtttg catatgaccg tggggatggc cgtcgcaagc
     1141 taatcataac aaccggggtt tcggccccgg ttctctttta tttctgcttc gttaacgtgt
     1201 cataacaggt catcaaatta cgataatcag gaatgtggtt agagaacaac gtcgccagtc
     1261 cttcaatatc attatgccag tcgcgatgca gctcgcacgc cacgccgaac catgtcatca
     1321 attgcgcacc agcttgcgac atgcgatccc atgccgaatg ccgggtaatt tcattaaagg
     1381 tccctgacgc gtcagtcacg acaaagacgt caaacccttc ttcaatggct gaaagcgccg
     1441 ggaatgccac gcaaacttcg gttaccacac cggcaataat taactgtttt ttacctgtcg
     1501 ctttgacagc ttttacaaaa tcttcgttat cccaggcgtt aatatttccc gggtgagcaa
     1561 tgtaaggtgc atcggggaat tgtgctttca gttctggaac taatgggccg ttaggaccgg
     1621 tttcaaaact ggtggtaaga atagttggta agttgaaata cttagcctgg tcacccagcg
     1681 ccagcacgtt atttttaaac ttatcgggtt cgatatcccg tacaagggaa agtaaaccag
     1741 cctggtgatc aacaagcaaa acgg
//
LOCUS       DADKRT010000319         1672 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.324, whole genome shotgun sequence.
ACCESSION   DADKRT010000319 DADKRT010000000
VERSION     DADKRT010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.324"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(822..1061)
                     /locus_tag="JQ356_004237"
     CDS             complement(822..1061)
                     /locus_tag="JQ356_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858310.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HAY4624112.1"
                     /translation="MPQGGVISPLLSNIILNEFDQYLNKRYLSGKARKDRWYWNHSIQ
                     RGRSTAVKENWQWKPAVAYCCYADDCVPRRRVLGT"
     gene            complement(1256..1613)
                     /locus_tag="JQ356_004238"
                     /pseudo
     CDS             complement(1256..1613)
                     /locus_tag="JQ356_004238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          370 a          465 c          405 g          432 t
ORIGIN      
        1 tcgtcaaaaa aaatcatctt cgtgaagttt tacgacatag tggaggagtt tgcttctttg
       61 aggtgcaggt tttcgtttgc gtggtttagc tgaacgggcc atataactac ctgaaagaca
      121 atgatattgt ctgtttttat aacggtaatc acaggccatg acaagccgca gccgtcaggc
      181 cgcctactcg gggcggttta gaacgcttat ttagtaccag atcttactta taataaaggg
      241 gcttggcagt ttggataaac tattgtcctt attccactaa tacaaacttt ttgtaaagta
      301 tattaaatat acttcatttc atactgaaat ccccggaagt attcaatcaa acaattacac
      361 cataaaagga agagggggcc ccaattaagt tgtcaagcat gtttactgcg caatcgcttg
      421 gtgctccgtc cctgtacccc gcattggtac tctggcgctc atggggcttc cacttgcgct
      481 tctcccttca catcggggtg acaggtcctc gttccccaca agagcctgaa tcgacttcac
      541 gccgctttta tgccggatgc cgcgcaggca gtaaacatat cccacaggaa cgactccacc
      601 attgttttga catcatctat atgctttcga cacatcatca gcggttcact ttcgttcgtc
      661 tcttcgaacc atacctgatc ggctcacgtc cgaccttttc ccatctcgct caccaccaca
      721 tctcttaaat gcagcagcag tggatggttt ggtgcctgcg cctgcacgcc gacaccgagg
      781 ggccttccct catctcttgt gccgcatggc tgcacaggga ctcacgtccc caggacgcgc
      841 cttcgtggca cacagtcatc ggcatagcaa cagtaagcaa cggcaggttt ccattgccag
      901 ttttctttga cagcagtact tcggcctcgc tggatactgt gattccagta ccagcgatcc
      961 tttctggctt ttccactcag gtagcgttta ttcagatact ggtcgaactc attcagtatg
     1021 atgttcgaca gcaacggcga gatcacaccg ccctgtggca tactttcact gaccgcccgg
     1081 aagagaccaa catcaacacg gcgttttcca cagcagtctc ataaaacgtg catcactgat
     1141 cctgcggcag acggctttca tcagcagccg gtgatgtact gtgtcgaagt agctggacag
     1201 gtcaccttca ataacccggc gccccgtgtt tccccgcagt cggtgagctg taatagtacg
     1261 tgatgtctcc cgcccacttc tggttcgggc cactggcgta aaaatcctgc gtcagcagat
     1321 tttctgatac aggcaggccg tgtgcacggt aactgatcgg gctgaacttc tgggaggctt
     1381 ttgcgctcag ttcctgacgg cgcagactgg ctgccacggt ttttacgtta aagtggtaac
     1441 cagagcacac agttcatccg tcaggcgtgg ggcaccgtaa cgctggactg ggtaaaagcc
     1501 ttgcggacaa cgctgtcgca gtgctgacgg aactgctgac gtgtgtttat ccttgtccgc
     1561 cgctgacacc acgtatacca gccgctgcgg gccacccgga gtacgcggca cattgccttg
     1621 atgacggttt acgcggtcgc ctgcggcaac ggctttccgg ctgacggtag tg
//
LOCUS       DADKRT010000320         1666 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.325, whole genome shotgun sequence.
ACCESSION   DADKRT010000320 DADKRT010000000
VERSION     DADKRT010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.325"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            13..1268
                     /locus_tag="JQ356_004239"
                     /pseudo
     CDS             13..1268
                     /locus_tag="JQ356_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415521.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YccE family protein"
     gene            1561..>1666
                     /locus_tag="JQ356_004240"
     CDS             1561..>1666
                     /locus_tag="JQ356_004240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine acid phosphatase"
                     /protein_id="HAY4624113.1"
                     /translation="MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVL"
BASE COUNT          547 a          262 c          342 g          515 t
ORIGIN      
        1 tagacgctat atatgggtag taatatacat ggaattagtt gcactgcaaa taattatttg
       61 aaacaggcct ggaacgatat aaaaaatgag tacgaaaaaa atcaaacata ttcaatcacg
      121 ctttttgaaa acacactggt gtgttttatg cggttataca atgaactcag acgtaaagta
      181 aatgaagagg atactccatg tctggaatgt gaatcactag aaaaagaatt tgaggaaatg
      241 cagaatgata atgatctatc attatttatg agaacattgc gtactaatga tacacaaatt
      301 tattcagggt ttcaggaggt attacatata ctatacaata tgttcaaaat gttgatattg
      361 ttagagtgtc cttgccgggc agaggttcag agtctatcac agattttaaa ggttattatt
      421 ggtatggctt tatggaatat attgaaaaca ttactgcgtg tgatgatgtt ttttctgagt
      481 attgtttaga tgatgaaaat atgagtatcc agccagaaca gataaatacg ccgggaatat
      541 ctgatttaga tactggtatt gatttgtctg gcatatcttt tattcagagt gaaattaata
      601 aaacatatgg attaaaatac gctccagtag atggcgatgg atattgtctg ttaagagcca
      661 tactggtttt aaaagaacat gagtattcat gggcgctggg cggccataag acgcaaaagc
      721 aagtatacga agagtttatt aaaattgttg ataaacaaac gatcgaggct cttgttgata
      781 cggcattcta taatctcagg gaagatgtaa agacgttatt tggcgttaat ctacaatctg
      841 acaacaaaat tcaggggcag ggtggttttt tatcatggag ttttttgtct tttaaaaaag
      901 aatttattga tagttgcttg aatgacaaaa aatgcatact gcatttaccc gaatttatat
      961 ttaatgataa caaggtacgc cttgttttag acaccgaccc agagcagagg gttaatgagg
     1021 tgaaaaattt cctcactgct ctttcagata gcatttgctc attatttatt gttaatagta
     1081 atatggcatc aatctccttg gggaatgaat ccttttcaac agatgacgac cttgagtatg
     1141 gttatttaat aaacactggc aatcattatg atgtttacct ccctcctgaa ctttttgctc
     1201 aggcttataa gttaaaaaat aaggaaatga atgcgcaact cgactattta aatcgttatg
     1261 caatttaatg gcaaaggcat atgctaaaaa ccattgttat tagtctcaca cttttttatt
     1321 ggtaaatatt gtctctgtat tggtaacgcc gaagatattc tgtttagcca caggtgcaat
     1381 tatcagcggc gtacgcgagg caggggctaa tcaggcatag tttgcgtcaa accttgcctg
     1441 tttttgaaga tgtatataga aaaacaggcg ttcaacaagc cattttgcga acctgttccc
     1501 ggaaaaaagt catatttctg tcacactctt tagtgattga taacaaaaga ggtgccagga
     1561 atgaacaaaa cgctaatcgc cgcagctgtg gcagggatag ttttactcgc ttcaaacgct
     1621 caggcacaaa ccgtaccgga aggctatcag ctacagcaag tgctca
//
LOCUS       DADKRT010000321         1651 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.326, whole genome shotgun sequence.
ACCESSION   DADKRT010000321 DADKRT010000000
VERSION     DADKRT010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.326"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..950)
                     /gene="corA"
                     /locus_tag="JQ356_004241"
     CDS             complement(<1..950)
                     /gene="corA"
                     /locus_tag="JQ356_004241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HAY4624114.1"
                     /translation="MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
     gene            1320..>1651
                     /locus_tag="JQ356_004242"
     CDS             1320..>1651
                     /locus_tag="JQ356_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624115.1"
                     /translation="MAHRLLIGKGMITLNLKRIFLTLTLLPLFSVAADDCALSDPTLT
                     VQAYTVNPQTERVKMYWQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLG
                     LYIENGQQ"
BASE COUNT          429 a          427 c          412 g          383 t
ORIGIN      
        1 tacaaccagt tcttccgctt aaagtacaga tacggtgcca ggcccgcgag gatcataaag
       61 ataatcgcgc cagggtagcc gaagctccac ttcagttctg gcataaactc aaagttcatg
      121 ccatagctgg aagcaacgag cgtcggcggc aggaatacca cggataccac cgagaagatt
      181 ttgatgatgc ggttctgctc gatgttgata aaacccatcg ccgcctgcat caggaagttc
      241 accttctgga acagagattc gttatgcggc agcagggatt cgatatctcg caggatttca
      301 cgcgcctgct ccagttgtcc acccggtaag cgtgctttac gtaccaggaa gttgagcgcg
      361 cgctgggtat ccatcagaca caggcgtact ttccagccga tatcttccag ttccgccagc
      421 gtggagagcg cctcatcgta ctcatcgccc tgatgccctt ccataatcac ccggctcaac
      481 tgctccaggt cgctatagat attttcaatt tcatctgcca actgttcgat tttggtttcg
      541 aacagatcca gcagcagctc gtaggcgtta ccgtctacca tcgactggct acgggcacgc
      601 atacgataca gacgaaaagc gggcagttca cgctcacgca gagtaaacag acgaccatca
      661 cggatggtaa atgccacagt ggagttaccg gcgtgatctt ccgcatcttc aaagaagaag
      721 aaggagtgaa tatgcaggcc gtcgtcgtct tcaaagaaac gtgccgatgc ttcgatgtct
      781 tccagttccg ggcgggttgc caggctctgg ccaagttcag attgtacacg cagtcgctcg
      841 tcgtcgtccg gttcgacaag atcaatccat actgcattta caaggggttg tgactcttcg
      901 acttccagcc gggtcagtcg gttattttcc agttgaaatg cgctcagcat gaccgggact
      961 cccaatgctt aaaatatcgg acagttcggt gggcacacag aaacaaattg ggtttcagac
     1021 cattaaacag cctgactcag cgcgacggga aaaattgagg tcgctgacaa ccgctaaggc
     1081 tatcagcaaa aagggatagc cttaggagtt gatcctggat gacaggatag tgagccagta
     1141 tctactgggt gtgtccaagg cgaatgtcct cttagaatga tcgtgcgcgc atgttacgcc
     1201 agcaaaattt tgccgtcaac acgcaacaga acaccacaga acaatagttg aacttcacgc
     1261 tttttggtac tcctcaaggt cgctaacagg ataaaaaaat cccacatcca ggacctataa
     1321 tggcgcatcg gctactcatt ggtaaaggaa tgatcacctt gaatctcaaa cggatttttc
     1381 tcaccctcac cttacttccc ttgttttctg ttgccgctga tgattgcgca ctctcagatc
     1441 cgacgctgac cgtacaggcg tataccgtta atcctcaaac agagcgggtg aaaatgtact
     1501 ggcaaaaagc caatggcgaa gcgtggggaa cgttacatgc tctgctggcg gatattaata
     1561 gtcagggtca ggtgcagatg gcgatgaacg gcggcatcta tgatgaaagc tatgcgccgc
     1621 tcggtttgta catcgaaaac ggtcagcaga a
//
LOCUS       DADKRT010000322         1646 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.327, whole genome shotgun sequence.
ACCESSION   DADKRT010000322 DADKRT010000000
VERSION     DADKRT010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.327"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            92..850
                     /locus_tag="JQ356_004243"
     CDS             92..850
                     /locus_tag="JQ356_004243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012599877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HAY4624116.1"
                     /translation="MSFMSSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQR
                     MQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRR
                     WQALVENNHFLSSNHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNK
                     ILEAKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIES
                     PRTGETIRVSRLAEPFWQDHFLGARWILTEETIL"
     gene            1026..1523
                     /gene="rayT"
                     /locus_tag="JQ356_004244"
     CDS             1026..1523
                     /gene="rayT"
                     /locus_tag="JQ356_004244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="REP-associated tyrosine transposase RayT"
                     /protein_id="HAY4624117.1"
                     /translation="MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRNAIIKVKR
                     DRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHA
                     IRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDINAG
                     ERIIL"
BASE COUNT          402 a          407 c          409 g          428 t
ORIGIN      
        1 tgaaacctca atagtaatat gcaaataagc aattaataat cccgtttact cctccggtct
       61 tttaaaattc tcaccttcat tcagccggtt tatgtccttc atgtcttcgt tcttgctcgg
      121 cagatttctg catccaggcg tgttttcgtt atgcgttttg ctccctttac tcgccagcgc
      181 caccacatca catatctctt tcagctacgc cgcccgccag cggatgcaaa accgtgcgcg
      241 tttattaaaa cagtaccaaa cccatctgaa aaaacaggcc agctacattg tggaaggcaa
      301 tgccgaaagc agaagggcgc tacgccagca caaccgggag cagataaaac agcatccaga
      361 atggtttcct gcgccgctca aggcaagtga cagacgctgg caggcgttgg tagaaaacaa
      421 tcatttcctc agcagcaacc acctgcataa tatcaccgaa gtggcgattc accgtctgga
      481 gcaacagctt ggcaagcctt acgtctgggg cggcacgcgg cccgatcaag gcttcgactg
      541 tagcgggttg gttttttatg cctacaacaa gatccttgag gctaagctcc cgcgcacggc
      601 taatgagatg tatcactacc atcgggcaac cattgtggca aataacgacc tgcgccgggg
      661 agatttgctg tttttccata tccacagccg tgaaattgcc gaccatatgg gcgtgtatct
      721 gggagacggt cagtttattg agtcgccgcg cacgggggaa accattcggg taagtcggtt
      781 agctgaacct ttctggcagg atcatttttt gggcgcgcgg tggatattga cggaagagac
      841 gattttgtag gacggataag gcgtttacgc cgcatccggc ggtggtgcgc agatgcctga
      901 tgcgacgctg acgcgtctta tcatgcctac aaatctgtgc gtttttgcga gccgctttcc
      961 tgttattcca tcacctcatt gccgaccttt ccttttcttc ttaccgttga gaaaaaggag
     1021 tcgccatgtc tgaatatcgt cgttattaca tcaagggggg aacctggttt ttcacggtga
     1081 atttacgcaa tcgtcgaagc caactcttga ccacccagta ccagatgctc cgtaacgcca
     1141 ttattaaagt taagcgagac aggccttttg aaatcaacgc ctgggtcgtt ttgccagagc
     1201 atatgcattg catatggaca ttacctgaag gcgatgatga tttttcctct cgctggcggg
     1261 aaattaaaaa gcaatttacc catgcttgtg gattgaaaaa tatctggcaa ccacgttttt
     1321 gggagcacgc catccgcaat accaaagatt ataggcatca tgttgattat atttatataa
     1381 atccagtaaa gcatggttgg gtaaagcaag tgagtgattg gccattctca acgttccatc
     1441 gcgatgtcgc gcgagggtta tatcccatcg attgggcggg ggacgtaacg gatataaatg
     1501 ctggcgagcg tatcatttta taattatgcg cagatgcctg atgcgacgct ggcgcgtctt
     1561 atcatgccta caaacctgtg ccggatcggt aggccggata aggcgtttat gccgcatccg
     1621 gcggttatgc gcagatgcct gatgcg
//
LOCUS       DADKRT010000323         1615 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.328, whole genome shotgun sequence.
ACCESSION   DADKRT010000323 DADKRT010000000
VERSION     DADKRT010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.328"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..1571)
                     /locus_tag="JQ356_004245"
                     /pseudo
     CDS             complement(1..1571)
                     /locus_tag="JQ356_004245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001433765.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          418 a          409 c          348 g          440 t
ORIGIN      
        1 caaaaaggca aacagatccg aagcgggata atctttttgg ggagaattgt tccagttagc
       61 aatatatccc gacagggggt tatacacctt agggttcatt tcaaaaggca atagcccttt
      121 ccagtcccat tttcccgtac caggaacggg taatcgcgga tcatggcctg attgacgatc
      181 tggataagca ccagtatgaa cataaccaat attgccgttt acatcagcat agtaccagtt
      241 gatggtcagt gcttgtttcg ctactcctgc caatttttgg ccttcatctg atgagtccag
      301 gccagcaaag acgccacctc tttaccatcc catgcgcggg atttagcgta agccgtttgt
      361 gtcgtctggt cagtttggag aatgttgcca tgcaccgtac gccagacagt aaaggtctct
      421 gcctgaccat ttttcaccgt aatggtttcc tcacggctta acattttcac ccacttacaa
      481 ttatgtaagt agtagcctgg tttctctgcc gacagccgtt cagcaaaaat atcgacatca
      541 tcgccgaaac ctgccgttga tccccaggaa atcacaccat tatgaccaaa aaccagccca
      601 ggataggcaa atggtgtatt gccagtgaca tcataaccag caccgtgcag accaatacca
      661 taagtatacg caggcgcata ccagccaaac tgcggaccat ttaccatgat tgctttcgca
      721 tcctgggctt tgcttttgcc gatcacccac atattgctgg tcgttggata ccccgccaga
      781 ccattggcac caccctgtgc aaattgtgca gcaatagttt cccggttctt ccctgctgtt
      841 aacgccagca gtgcgccatc cgcccctttt gctggtcggt caagcattgg tgcaggtaaa
      901 tcgtagcgtg gcaacagagc tgctgtttgc gagttttgct gattaaattt aagtgggtag
      961 ctactctctt gtacggcaat agtggttggc gctgatgggt ttaccagcca tttcaactga
     1021 ttaaataccg ccatgccttg tgatacacca tatttatctt ttaaagccgt tagcagtgcc
     1081 agattatcaa tttcgctagt gctatcagag aagcggtttg ccatggtgcc cacaaatatc
     1141 atcgcgacat caaacggttc ccagcgctta ggagtaaagc caaatgtatt aaactgtttt
     1201 ggtaagagcg tctctggatt ggtatttacc ttatcaatcc aggcattcat tccatcagcg
     1261 tagccttgca gaatggacat atcctctggg gaaagggcat caatttgcgc ccggatagca
     1321 tccggccagt agttacgacg gatatcttta tcaaatttca caaaatcttt gccaagcact
     1381 tccgcgacag tcccttgagt actgcgacgt gccatttcca tctgaaaaag gcgatcttgt
     1441 gctactacat agccataaaa taggtgccat gtatcattgg cataaatatg cggcatgccg
     1501 tattcatcgc gaacaatctt tatctcactt gacgactgct cagccagtgc aggtaagctc
     1561 caataataca tcagggaagc agtaacacag ttcacgatca tacgatttct atttt
//
LOCUS       DADKRT010000324         1612 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.329, whole genome shotgun sequence.
ACCESSION   DADKRT010000324 DADKRT010000000
VERSION     DADKRT010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.329"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            13..1566
                     /locus_tag="JQ356_004246"
     CDS             13..1566
                     /locus_tag="JQ356_004246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY4624118.1"
                     /translation="MSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDL
                     CTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKIS
                     KDIESGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENL
                     HALKEKRLNGMPKTTPKSGQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSII
                     PPLKNYNERLHNTNLFNPKYQKKAVMNYMEYLVTCQLDEQQMSSLLYERDDLSAIDFS
                     LLMKTIKAFSFGGDLQTLASKPGSTISSIPSERRILININHDFPNNGNLFNDFLFNHQ
                     QDEQLAMAYMAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAWLNKGCSTYQQL
                     YNEFHALYIDKAGIWSAFEGVFATKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEG
                     TWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALLLGKT
                     GEPPNYLYL"
BASE COUNT          555 a          304 c          312 g          441 t
ORIGIN      
        1 atcagggaaa atatgtctga gtttgcacgt tgccattatg ggtatataca aatccctcca
       61 gtgacaactt tccgcgccga cggaccagaa actcccgaag aagaaaaagg ttactggttt
      121 catgcttatc aacccgaaga tctttgtacc atccataacc caatgggaga tttgcaggat
      181 tttatcgcat tggttaaaga tgctaaaaaa tttggtatcg atatcattcc tgattataca
      241 tttaacttta tgggaatcgg gggtagtggt aaaaatgacc tggattatcc ctctgctgat
      301 atacgagcga agatcagtaa agatatagaa agcggtatcc ctggctattg gcaaggtcag
      361 gttttgattc cattcattaa agatccagta acaaaagaac gtaaacaaat ccatccagaa
      421 gatatacatc tcactgcaaa agacttcgaa gcaagtaaag ataacatctc taaggatgaa
      481 tgggaaaacc tccatgcatt aaaagaaaag cgtttaaatg gaatgcctaa aacaacaccc
      541 aaaagtggcc aggttattat gttgcaaaat caatacgttc gagaaatgcg aaaatatggc
      601 gtacgaggtt tacgttatga tgcggcaaaa cactcaaaac atgaacaaat agagaggtcg
      661 ataatcccac cgcttaaaaa ttataatgag cggttacaca atactaattt atttaaccca
      721 aaatatcaaa aaaaagccgt tatgaattac atggaatacc tggtaacttg tcagttggat
      781 gaacaacaaa tgtcatcact gctttatgag agagatgatt taagtgccat tgatttttct
      841 ttactcatga aaacgataaa agccttttca tttggtggag atctccaaac ccttgcatca
      901 aaaccgggtt ccacaatctc aagtatccca tcagaaagac ggatattgat taacattaac
      961 cacgattttc ctaacaatgg taatcttttc aatgactttc tatttaacca tcaacaagat
     1021 gaacaattag caatggcata tatggccgct ctcccgttca gcagaccttt agtttactgg
     1081 gatggccaag tattaaaatc aacgactgaa attaaaaatt atgatgggtc cacgcgtgtc
     1141 ggcggtgagg cgtggcttaa taaaggttgc tctacctatc agcagctcta caatgaattc
     1201 cacgcattat atatagataa agcaggaata tggagcgcat ttgagggtgt atttgcaact
     1261 aaaaacgttc tggcctttag tcgtggggat tctgtgaaca ttaatcactc tcctcatgat
     1321 gggctagtta taataaataa aggaaacgaa gaagttgaag gtacctggcc taacaaattg
     1381 caacctggaa tatacaaaaa catggggagt aatagcgtta acattattat taataatacc
     1441 cgaaaaatta tcccccctgg taaagtattt acgcttagag gcggaactct aaatatcaat
     1501 attcctgggc gtagcgctct tcttttaggg aaaacaggag aaccgccgaa ctatctctat
     1561 ttataattta atgttatatc tgccccgata aaacggggca gataatatgt tt
//
LOCUS       DADKRT010000325         1591 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.330, whole genome shotgun sequence.
ACCESSION   DADKRT010000325 DADKRT010000000
VERSION     DADKRT010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.330"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..645)
                     /locus_tag="JQ356_004247"
     CDS             complement(<1..645)
                     /locus_tag="JQ356_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfK family protein"
                     /protein_id="HAY4624119.1"
                     /translation="MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDEL
                     LIALPGEEFTVAAVSRIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYE
                     ESYGISKESHWREAINAKTMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNH
                     AKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSL"
     gene            complement(696..1394)
                     /locus_tag="JQ356_004248"
     CDS             complement(696..1394)
                     /locus_tag="JQ356_004248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HAY4624120.1"
                     /translation="MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDK
                     AGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLEN
                     LITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTV
                     GASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSR
                     AQDVLARLQRQQGE"
     gene            complement(1467..>1591)
                     /locus_tag="JQ356_004249"
     CDS             complement(1467..>1591)
                     /locus_tag="JQ356_004249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HAY4624121.1"
                     /translation="QKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEIT"
BASE COUNT          380 a          420 c          344 g          447 t
ORIGIN      
        1 aagtgatgtc agcgggatat cgacacccaa cgcgcgcgaa aataaccact ctggctcgcc
       61 gagatcgtta aaagattcct caccatttaa cagtaaatat tcgtaagtat cttcggttac
      121 ttgccgctgg tagcccatgg taaaattatg gacctcccat ttggcatggt tttgattttc
      181 tactttttcc agcatgtaga cgggttcgat atttcccggt tcttcgctgt taaaaaatcg
      241 ctgccagcgt ttttcctgcc agtttaaggt cattgccccc atcgttttgg cgttgatcgc
      301 ctcgcgccag tgactctctt tactgatacc gtagctctct tcatagacaa agagcttgat
      361 atcatcaatg tcatcaatat cttcgccgcc ggtggtattg atttgcagaa attcatcgcc
      421 tgaagtgtag taacggaaaa tctggctacc gcctcccaga tcgatgcggc tgacagcggc
      481 taccgtaaat tcctcacccg gtagcgcaat cagcaattca tcttccagca aacgaaacgc
      541 taacgtgtcg agcgtaaagc cactattgag atgaagtccc agcggaccgc gagcgatagc
      601 aggcttatta tccttgccaa acagacgctg gaaaaaacca gacatatttt atccttaaaa
      661 tagttgccag ccttttagcg aggctggcaa aaaaattact cgccctgttg gcgttgcagt
      721 cttgctaata catcctgggc tctactttta ttgctaccgc caattccggc ttccgccagc
      781 ttttcgtcaa ggtcgcgacc gtctgcgact ttctccaact gtgcggcagc atccaggcga
      841 gcctgacgtt cggcctgacg cgtttgcagg cgttttaagg attctgccgc tgtcgaaacg
      901 ctggaagatg cgccaacggt agaggttgtt acagcctgtt gtgcacgctg catggcttca
      961 gtggctttaa cgacttccat ttgctgctca aactgagcga tacgctgcgc tgtcgctgta
     1021 actgcttttt ccacgccatc acgggagact tccagattcg acaacacttg ctcttcagcg
     1081 gtaatgagat tctcaaggcg cgcgatttct tcagcaactt cgttaatcaa cgacggatta
     1141 acgttcttgc ttaacgcttc cagcgcacgg gcttccagac tggctttgcg ctcacgtaaa
     1201 tctttcagct tatcgtgact taatttcacc cgcgccagca gatcaacgcg agattttccg
     1261 gctttatcga gttcagcttt agcgtcacga atatgctgtt ccagcatgcg cacgccctgg
     1321 gtttcttcaa tggattcttc cgcctgggag ataaacgatt tccccagcgt aaataaactt
     1381 tttaaaattc ccataaatac ccgtccttgt aattagtgtg aatattcttc tgtaatttca
     1441 gccagatcca atgcgttatc taccagctag gttatctcaa gcaggatatc ttcaagagaa
     1501 gatttaagcg ataacgcccc gaaaacaatg taatactctt cctgttgcac gctggagatt
     1561 cctaccgatg acaacggcat catcttctga t
//
LOCUS       DADKRT010000326         1589 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.331, whole genome shotgun sequence.
ACCESSION   DADKRT010000326 DADKRT010000000
VERSION     DADKRT010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.331"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            4..597
                     /gene="argO"
                     /locus_tag="JQ356_004250"
     CDS             4..597
                     /gene="argO"
                     /locus_tag="JQ356_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
                     /protein_id="HAY4624122.1"
                     /translation="MILPLGPQNAFVMNQGIRRQYHIMIALLCAISDLVLICAGIFGG
                     SALLMQSPWLLALVTWGGVVFLLWYGFGAFKTAMSSNIELASAEVLKQGRWKIIATML
                     AVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWFFGLAILAAWLAPRL
                     RTAKSQRIINLVVGCVMWFIALQLARDGIAHAQALFS"
     gene            690..1430
                     /locus_tag="JQ356_004251"
     CDS             690..1430
                     /locus_tag="JQ356_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HAY4624123.1"
                     /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
                     AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
BASE COUNT          375 a          372 c          437 g          405 t
ORIGIN      
        1 gctatgattc tgccgctcgg cccacaaaat gcttttgtga tgaatcaggg cattcgtcgt
       61 cagtaccaca ttatgattgc cttactttgc gctatcagcg atttggtcct gatttgcgcg
      121 gggatttttg gtggtagcgc gttattgatg cagtcgccgt ggttgctggc gctggtcacc
      181 tggggcggcg tagtcttctt gctctggtat ggttttggcg cttttaaaac agcgatgagt
      241 agtaatattg agttagctag tgccgaagtc ctgaagcaag gcagatggaa aattatcgcc
      301 accatgttgg cagtgacctg gctgaatccg catgtttacc tggatacttt tgttgtactg
      361 ggcagccttg gcgggcagct tgacgtcgaa ccaaaacgtt ggtttgcgct cgggacaatt
      421 agcgcctctt tcctgtggtt ctttggtctg gctattctcg cagcctggct ggcaccgcgc
      481 ctgcgcacgg caaaatcaca gcgcattatc aatctggtag tgggatgtgt catgtggttt
      541 atagccttgc agctggcgag agacggtatt gctcatgcac aagccttgtt cagttaggcg
      601 ctatctgatg gaaaaataaa acagaggcgc taagcttgcc tccagaggtc ctgaattttg
      661 ggcaagtcaa ttaacacgga gagactaacg tgaagttcaa agttatcgcc ctagcggcat
      721 taatgggtat tagcgggatg gcagcgcagg ctaacgaatt gccggatgga ccgcatattg
      781 tcacctccgg tacggcaagt gtggatgcgg tgccagacat tgccactctt gcgattgaag
      841 ttaacgtggc cgcgaaggat gccgctacag ccaagaaaca ggcagatgag cgcgtcgcac
      901 aatacatttc cttccttgaa ctcaatcaga tcgcgaaaaa agatatcagc tcagcgaatt
      961 tacgcaccca gccagattat gattatcagg atggtaaaag tatcctgaaa ggctaccgcg
     1021 ctgtgagaac ggtggaagtc acgctccgtc agttagacaa actgaattcc ttgctggatg
     1081 gcgcgctgaa ggcgggtctt aacgaaattc gttcagtgtc gctgggcgtg gcgcagccgg
     1141 atgcctataa agacaaagcg cgtaaggcag cgattgataa cgcgattcat caggcgcagg
     1201 aactggcgaa cggctttcat cgtaaactgg ggccggtata tagcgtgcgc taccatgttt
     1261 ccaactatca gcccagccca atggtgcgga tgatgaaagc cgatgctgcg ccggtgtctg
     1321 cccaggaaac ttacgagcag gccgctattc agtttgatga tcaggtcgat gtggtcttcc
     1381 agttagaacc tgtggatcaa caacccgcta aaacacctgc agcacaataa tacttgtagc
     1441 ccgacgtatt cgtcgggcta atgcctttac ccgatattgc ctcctttttc tgtaattttc
     1501 tgtaaaacca tgacgtaatc acctatcttt gctcgcggtt tcatcaagga taggctgact
     1561 gaaacggtta agcggacaag gatgcgggg
//
LOCUS       DADKRT010000327         1584 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.332, whole genome shotgun sequence.
ACCESSION   DADKRT010000327 DADKRT010000000
VERSION     DADKRT010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.332"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(69..491)
                     /locus_tag="JQ356_004252"
     CDS             complement(69..491)
                     /locus_tag="JQ356_004252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624124.1"
                     /translation="MKIRHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELPLVP
                     GKDWNNQQNIYHRWLKGETKAQREKIQKLIPAVLAILPRELRHRLCIFDTLERRALLA
                     AQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVVVH"
     gene            complement(475..702)
                     /locus_tag="JQ356_004253"
     CDS             complement(475..702)
                     /locus_tag="JQ356_004253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY4624125.1"
                     /translation="MLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQE
                     ASGGELQYDPKVYDEYRKAKRPGKVIHENQA"
     gene            779..1186
                     /locus_tag="JQ356_004254"
     CDS             779..1186
                     /locus_tag="JQ356_004254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY4624126.1"
                     /translation="MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQ
                     PAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALPES
                     EQKALLSEMRARVENFNKLFEELLKARKRSANK"
     gene            1390..1542
                     /locus_tag="JQ356_004255"
     CDS             1390..1542
                     /locus_tag="JQ356_004255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 domain-containing protein"
                     /protein_id="HAY4624127.1"
                     /translation="MDTIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTEAGARRW
                     LAKNTS"
BASE COUNT          446 a          414 c          326 g          398 t
ORIGIN      
        1 cgaaccttcc tccggatata atctgtgatt ccccaatcaa cagaaccaga ggaggttcgg
       61 cataaacatc aatgcacaac gacagaatcg tcggacgacc caccaccgct gaaatgtgct
      121 ttccggtaaa cggcctgaac tgcgtcatca tgcgcatcaa ttgccgtact caacgcttcc
      181 tgcgccgcca gtaatgcacg gcgttccagg gtatcgaaga tacagagtcg gtgacgcagc
      241 tcacgcggaa gaattgccag aaccgcaggg atcagtttct gaattttctc cctttgcgct
      301 ttcgtttcac ctttcaacca acggtgatag atattctgct gattgttcca gtccttgcct
      361 ggtaccagag gcaattcgcc gcccccctgc cgcagatatt cttcagtaat tgcgttagcg
      421 acccacgcct gccctttttc ggctgccagg gctaacagca ctgattcgat gtgctcatgc
      481 ctgattttca tgaatcacct tcccaggtcg ttttgcctta cgatattcgt cataaacttt
      541 ggggtcgtac tgaagttccc cgccagatgc ctcttgcagg cgcatcgcgc gaccttcagg
      601 aaccagttcc ccccatgcag caatgcttgc cagcctaact cctgcggcat tggcaagctt
      661 tgttttgctg ccaaaaaacg ctatagcatc aattttcaac atatcgagct ccttagattt
      721 tcctaaggaa actagatcgt agagaaacct aagtcaagaa agattagaat tccctaatat
      781 gaaaaacgaa accttcggtg ctcgcctctt acataggcgt aaaaaattaa aactgtctca
      841 ggccgcatta ggtaagctgg tcaaagtggc tcacgtaaca atttctcaat gggaaagaga
      901 tgaaacacag ccggcgggga aaagattatt cgcactgagc caagcgcttc agtgctcacc
      961 gacttggctt ctttttgggg atgaagataa acaaccaggc gaaccgatcc cggataatca
     1021 gccagccatt ctgacagaag atcaaaaaga gttacttcaa ctgttcgacg cactgcctga
     1081 gtcagagcaa aaggccctgt tgtcagagat gcgtgctcga gttgaaaatt tcaacaaact
     1141 ttttgaagaa ctactcaaag ctcgcaaaag aagcgcaaac aaataatccc cttttttctc
     1201 cacaccctgt aataaaaagc acaaactttc aaacacttgt gttttttaca tcaaaaaaac
     1261 ttaggttttt tatacataaa atcttgactc cacgtcttag gttattctaa attccattca
     1321 tcaagacacc gcacggtgtt ctcagcaaac agttccacta ccccggcgtt aaggggaaat
     1381 gaggtcagca tggatactat cgatcttggc aacaacgaat ccctagtgtg tggcgtgttt
     1441 cccaatcagg acggcacatt caccgccatg acgtatacca aaagcaaaac gtttaaaacc
     1501 gaagctggcg cacgtcgctg gcttgccaaa aataccagct aatccattta ttggattaat
     1561 tcaatattct cgctgtagag gtat
//
LOCUS       DADKRT010000328         1574 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.333, whole genome shotgun sequence.
ACCESSION   DADKRT010000328 DADKRT010000000
VERSION     DADKRT010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.333"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..91
                     /gene="yoaK"
                     /locus_tag="JQ356_004256"
     CDS             <1..91
                     /gene="yoaK"
                     /locus_tag="JQ356_004256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YoaK family small membrane protein"
                     /protein_id="HAY4624128.1"
                     /translation="GIIFPVVIFITAVVFLAWFFIGGYAAPGA"
     gene            94..168
                     /gene="yoaJ"
                     /locus_tag="JQ356_004257"
     CDS             94..168
                     /gene="yoaJ"
                     /locus_tag="JQ356_004257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YoaJ"
                     /protein_id="HAY4624129.1"
                     /translation="MKKTTIIMMGVAIIVVLGTELGWW"
     gene            complement(227..475)
                     /locus_tag="JQ356_004258"
     CDS             complement(227..475)
                     /locus_tag="JQ356_004258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY4624130.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG
                     WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS"
     gene            complement(623..805)
                     /locus_tag="JQ356_004259"
     CDS             complement(623..805)
                     /locus_tag="JQ356_004259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
                     /protein_id="HAY4624131.1"
                     /translation="MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVN
                     TVRSYDTENEHDVCGW"
     gene            complement(809..1169)
                     /gene="yeaR"
                     /locus_tag="JQ356_004260"
                     /pseudo
     CDS             complement(809..1169)
                     /gene="yeaR"
                     /locus_tag="JQ356_004260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310533.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
     gene            complement(1342..>1574)
                     /locus_tag="JQ356_004261"
     CDS             complement(1342..>1574)
                     /locus_tag="JQ356_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HAY4624132.1"
                     /translation="FFVQFIDVNAPHTGISFFILATTLELVSFCYLSFLIISGAFVTQ
                     YIRTKKKLAKVGNSLIGLMFVGFAARLATLQS"
BASE COUNT          432 a          375 c          350 g          417 t
ORIGIN      
        1 cggtattatt tttccggttg taatctttat tacagcggtc gtatttttag catggttttt
       61 tattggcggc tatgctgccc cgggggcata aagatgaaaa aaacaacgat tattatgatg
      121 ggtgtggcga ttattgtcgt actcggcact gagctgggat ggtggtaacg tcacctctaa
      181 aaaatagcaa aggctgcctg tgtgcagcct ttgtgcaatt taagcgttaa cttttaatct
      241 tcctgtagat aaatagcacg acaatcgcac caataacggc aaccacgaag ctgccaaaat
      301 tgaagccatc gactttacca aagccaaaca gcgtgctgat ccatccgccg actacggcac
      361 cgactatccc cagcaggata gtcataaaga atccaccacc atctttacct ggcatgatcc
      421 acttcgccag aataccggca ataagcccaa aaataatcca tgacagaatg cccattgttt
      481 cctcacttat ctgttttgca ttagcgggtt agtcgctgat aaaaagcata gcacaacatc
      541 gggagggcaa gatttgtgac gagcatcacg gaggattttt ttgcgatggc gcagaaattg
      601 cgccatcaac gatcagtgat aattaccaac cacaaacatc atgttcgttt tccgtgtcat
      661 aagaacgcac ggtattcacc agatctttta tcacttcagc cgccacttct ggcaccagca
      721 aagtcatcgg cgtctctgtt tcataatcga cagaaacgcc attactgtta ttggtgacgg
      781 tcacggtata cgttgctttg cccatgattc atttcccgtt atgaatgact ttccgttgtt
      841 gcgcaccttc catcaggact tcaggagcca cgaagaagtc aatgttgaca taagtatcgt
      901 cagtcatggc ttcaatgttg tgccactttt ctggagggaa caccgcaaac tgccccgctt
      961 cgataaggat cacctgatca ggctctgcac tgtgttcatc agcgtagccg agatatttga
     1021 ccgccccatg cataacggaa aggcgtgggt aacccccctg gcgcgttcct ttatcaagat
     1081 gacgttcgaa ttattccggc aggcgcagtt tgtttattcc agaaaggcgt tgagcgcgta
     1141 tgaatataat tctgtgggat ttgcagcatc cttttccctc cttcggtgaa tgcgctgaaa
     1201 acggtttatt ccagccgttt cagggtacgc ctgataattt gcattttaaa taccatttat
     1261 tggttacttt ttagcaccat atcagagaaa aatcagggag gattacaagt gggaagcccg
     1321 cgacaacgcg ggctgaatgt atcaggattg cagcgtcgcc agtcgggcgg cgaaacccac
     1381 gaacatcaaa ccaatcagtg agttgccaac tttagccagt ttctttttgg tacgtatgta
     1441 ctgcgtgaca aaagcaccag aaataatcag gaagctcaaa tagcagaaac tcaccagttc
     1501 cagcgtcgtc gccagaataa agaatgaaat tcccgtatgt ggggcattaa catcgataaa
     1561 ctgtacgaaa aacg
//
LOCUS       DADKRT010000329         1558 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.334, whole genome shotgun sequence.
ACCESSION   DADKRT010000329 DADKRT010000000
VERSION     DADKRT010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.334"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..988)
                     /locus_tag="JQ356_004262"
     CDS             complement(<1..988)
                     /locus_tag="JQ356_004262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001362017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="HAY4624133.1"
                     /translation="MKNPKLQYLTDYSPSDAPWDAHRSVSDDVGGIYLLAAEYERYGA
                     RMASCGGLLRFGWSTLKETGETRLRLREAHFCRVRHCPVCQWRRSLMWQARFYQSLPR
                     IVADYPDARWMFLTLTVRNCAIGELGEMLNRMNAAFQRMKVRKEFLPVQGWIRTTEVT
                     RGSDGSAHPHFHTLMMVPPSMLSGDGYVKHARWVELWRECLRVSYNPNVDVRAVKPRK
                     PKDGESLACATAELVRGAVAETLKYSTKPADMVADPEWFLELTRQTHKRRFVATGGAL
                     KDVLKLDQETDADMVSGDDISEGDDDGSRIAFEWKTEVRKYRRSPTKDKTESG"
     gene            complement(1397..>1558)
                     /locus_tag="JQ356_004263"
     CDS             complement(1397..>1558)
                     /locus_tag="JQ356_004263"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624134.1"
                     /translation="NASRHAKKFRVPLTVLELVKQKIAGPRASGVGSDFVIDDGTGKT
                     LGMVVGVTE"
BASE COUNT          331 a          465 c          412 g          350 t
ORIGIN      
        1 agcctgattc agttttatct ttcgtcggtg agcgacggta ctttctgacc tcggttttcc
       61 actcgaacgc gatgcgtgaa ccgtcatcgt cgccctcgga aatatcatcc ccgctcacca
      121 tgtcggcgtc ggtttcctga tcgagtttca gcacgtcttt gagtgcgccg ccggtcgcca
      181 caaagcggcg cttgtgcgtc tggcgggtca gttcgaggaa ccattcagga tcggccacca
      241 tgtcagccgg cttcgtggaa tatttcaggg tttcggccac tgcgccgcgc accagttcag
      301 cggtcgcgca ggctaaggac tcgccatcct ttggcttacg gggttttact gcccggacat
      361 caacattcgg gttgtaactg acccgcaggc actcccgcca gagttcaacc cagcgagcat
      421 gttttacgta cccgtcacca gatagcattg agggcggcac catcatcagg gtgtggaagt
      481 ggggatgcgc gctgccgtcg ctgccgcggg taacttccgt tgtgcggatc cagccctgaa
      541 caggcaggaa ctccttgcga accttcatac gctgaaaagc tgcattcatc cggttcagca
      601 tctcgcccag ttccccaatc gcacagttgc gcacggtcag ggtcaggaac atccagcggg
      661 catcagggta atccgccacg atacgcggca gggactggta gaaacgggct tgccacatca
      721 gggagcgcct ccactggcag acaggacagt gccggacacg gcagaaatgc gcctcacgca
      781 gcctcagacg cgtttctccg gtttccttga gggtagacca cccgaaacgc agtaaaccgc
      841 cacaggaggc catacgagcc ccgtagcgct catattcggc cgcaagcagg taaatccctc
      901 ccacgtcgtc agaaacgctt ctgtgtgcgt cccagggcgc gtcagagggg gaataatcag
      961 tgaggtactg gagtttaggg tttttcatgc gcaccacccg attgtgggtg atggctcatc
     1021 tgacgtgtta tcattgccat atcacctgtg ttgtcgtgtc actaattcga atttctacag
     1081 gtggtcacgc ccccgaacga ttgccctcgt tgcgggggtc gcttttaacg cgaccacttc
     1141 cgacagaata cttctaaacc catttcggag caaatgtgcc ctcaagcctt gcgggacaag
     1201 ggctggaggc caatttgaat cctagagtta tcccttaagt ataaatacaa ggatcgcgcg
     1261 cgagatttgc ttgaattttg agctggattt tcagtaaccc aaaacctccc aaccccaccc
     1321 acttacaccc atctcatcca cagactttca ccccaatttt gtgaacaaca aaaaaccgtc
     1381 ttgcaggtgg ttggcctcac tccgtgacac caaccaccat acccagcgtt ttccccgtgc
     1441 cgtcgtcaat cacaaaatcg gaacccacgc cggaggcgcg gggccccgcg attttctgtt
     1501 tgacgagttc aagaacggtg agcggtacgc ggaatttttt cgcgtgccgt gaggcgtt
//
LOCUS       DADKRT010000330         1556 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.335, whole genome shotgun sequence.
ACCESSION   DADKRT010000330 DADKRT010000000
VERSION     DADKRT010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.335"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            25..627
                     /locus_tag="JQ356_004264"
     CDS             25..627
                     /locus_tag="JQ356_004264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001437057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY4624135.1"
                     /translation="MENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKR
                     GQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRP
                     DGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMI
                     APFSDEVMKVTGLNGKASSAKVHFYAINDFGGTIEGNASL"
     gene            662..1556
                     /locus_tag="JQ356_004265"
                     /pseudo
     CDS             662..1556
                     /locus_tag="JQ356_004265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414681.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
BASE COUNT          455 a          338 c          340 g          423 t
ORIGIN      
        1 gatcaaaaaa gtgtcaacgt acgtctggaa aataaaggga ataacccgtt gcttgtccag
       61 agttggttag atactggcga tgacaacgct gagcctggca gtattacagt cccttttact
      121 gccacgccgc cagtatcgcg tattgatgcc aaacgtgggc aaacaatcaa attaatgtac
      181 acagccagca cctcactgcc taaagacaga gagagcgtgt tctggtttaa cgtactggaa
      241 gttccaccaa aaccagatgc agaaaaggtc gcgaatcaaa gtctgctgca actggcattt
      301 cgcacacgta taaaactttt ctatcgcccg gatggattga agggaaatcc ctctgaagcc
      361 ccgttagccc tgaagtggtt ctggtcaggt tcagaaggta aggcgtcatt gcgagtgacc
      421 aatccaaccc cttactacgt ctcttttagc agtggtgatt tagaagctag cggtaaacgc
      481 tatccgattg atgtgaaaat gattgcacca tttagtgatg aggtcatgaa agtcactggc
      541 cttaatggca aagcaagttc tgcaaaagta catttttacg ccattaatga ttttggtggc
      601 accattgaag gtaatgccag tctgtaatca ggcaaggata taattccgca ggaagcataa
      661 cgtgactata aaaccaacta aaaattatca taatcatctg acccgtatcg ctacgttttg
      721 cgcgctgctg tattgcaata gtgctttctg tgctgaactt gttgaatatg accatacctt
      781 cctgatgggg cagaatgcct caaatattga tctcagccgg tatagtgaag gtaaccctgc
      841 tataccgggt atgtacgacg tcagtgttta tgtcaacgat caacctatta ttaaccaaag
      901 cattacattt attgaaattg aaggaaaaaa aacgcacaag cctgtatcac acttaagaat
      961 ttattgcagt ttcatataaa ttctcccgat ataaataacg aaaaagccgt tctgcttgcc
     1021 agggatgaaa cactcggcaa ttgccttaat ttgacggaaa ttatccctca ggcttctgtt
     1081 cgttatgacg ttaacgagca acgtctggat atagacgttc ctcaggcatg ggtaatgaaa
     1141 aattaccaaa actatgttga tccatcgtta tgggaaaatg gcattaatgc ggccatgttg
     1201 tcatacaacc tcaacggata tcatagtgaa actcctggtc gaagaaatga cagcatttat
     1261 gctgctttta acggtgggat gaatttaggt gcatggcgac tgcgtgcctc aggcaactac
     1321 aactggatga ccgattctgg cagtaattat gattttaaga atcggtatat acagcgtgat
     1381 atcgcctcgc tgcgttctca actcattctt ggtgagtctt atacaacagg cgaaaccttt
     1441 gattctgtca gtatccgcgg cattcgttta tacagcgaca gccgcatgtt gcctccgaca
     1501 ttagcgagtt ttgcgcctat cattcatggc gttgctaata ccaacgccaa agtcac
//
LOCUS       DADKRT010000331         1527 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.336, whole genome shotgun sequence.
ACCESSION   DADKRT010000331 DADKRT010000000
VERSION     DADKRT010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.336"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..1189)
                     /locus_tag="JQ356_004266"
     CDS             complement(<1..1189)
                     /locus_tag="JQ356_004266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SopA family protein"
                     /protein_id="HAY4624136.1"
                     /translation="MLREVSISNDTISVKFYRNEKIECACNFLMDKDSQGYIDLSDFD
                     VTNCHFKGDVISKVSFLSSNLQHVTFECKEIENCNFTKATVDNVIFKCRRLHNVIFLK
                     TSGECVDFNQDILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKE
                     ISFIKSNLTAVMFDHVRMSTGNFKDCITEQLELTIDYSDIFGNEDLDGYINNIIKMID
                     TLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFSHCPYIKDPIIRSYIHSGE
                     DNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNNFFIQLIDQALRSTDDM
                     IKANAWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIFILFSSVDDGPVMVV
                     SSQR"
BASE COUNT          525 a          264 c          224 g          514 t
ORIGIN      
        1 agcgctggga gcttaccacc ataacaggcc catcatcgac agaggagaac aggataaata
       61 tattatcgtt tcgtgttaat ttattagtgt taaaggttct taacttttct tcagtttcta
      121 taaatatagg tgaaacatca tcactacgaa tccactcttt ataaagatac caggcatttg
      181 ctttgatcat atcatccgtt gatcgtaagg cctgatcgat aagttggata aaaaaattgt
      241 tatttttatc aatcagccct ttattcatat taaacctgtt aataaaatgg atcatctgtt
      301 gggtatcgaa atccaccttg ctgaatcgat gttgacgcat aaaatcatcg aacttgttat
      361 cttcaccaga atggatataa ctgcgtataa ttggatcttt tatataagga caatggctaa
      421 atgttttctt catattctca ataaagtttt tattaacaat attaagaatt tttaattgca
      481 taaccagttt tactgccaga acggatttca atatcattgc attatctggc aatgtatcaa
      541 tcatttttat aatgttattg atataaccat cgagatcttc attcccaaat atatctgaat
      601 aatcaatagt taattccaat tgttctgtaa tgcaatcttt aaaattccct gtcgacattc
      661 gcacatgatc aaacataaca gctgtcaaat tcgatttaat aaatgatatt tctttggcag
      721 acagaaactc tgctctggtg aagtgcgaag cgtaaagata acaattatcg aagtttgaat
      781 ttctaatctg acattcgcga aaattactat gaccaagttg actctgcgag aagtcaactg
      841 tatcaagaat atcttggtta aaatcaacac attcgccact cgttttgaga aaaatcacat
      901 tgtgtaaacg tcgacattta aatatgacat tatcaactgt tgccttagta aaattgcaat
      961 tctcaatttc tttacattcg aaagttacat gttgtagatt tgatgataaa aaagacacct
     1021 tagaaataac gtcaccttta aaatgacaat ttgttacatc aaaatcagac aggtcgatat
     1081 acccctgcga atctttatcc atcagaaaat tacaagcgca ttctattttt tcatttctgt
     1141 agaattttac acttatagta tcattactaa ttgagacttc acgtaacata tttattgcat
     1201 gattttttcg ttccgttgtt ttatatttaa aaatatatta ctgatataaa taaagttatc
     1261 tctgtttaaa cctgtcaccc cattgaaatt acgtagtaaa tcaagatcta ctatattatt
     1321 tccttgaacc acatcatgtt tcatcaaaga gttattgcca ccagaatttg tgatatgacc
     1381 tatcataaaa cctctgtaat acagaaataa aataacctgg aaaagtagcc tgagcgtcca
     1441 gacactaccg gcgaaaggaa aagaatctct gataaggcat tgagataatg gacattctta
     1501 gtgaagaaga agtgaagtac tataaaa
//
LOCUS       DADKRT010000332         1496 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.337, whole genome shotgun sequence.
ACCESSION   DADKRT010000332 DADKRT010000000
VERSION     DADKRT010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.337"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..1494
                     /gene="pdeB"
                     /locus_tag="JQ356_004267"
     CDS             <1..1494
                     /gene="pdeB"
                     /locus_tag="JQ356_004267"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeB"
                     /protein_id="HAY4624137.1"
                     /translation="LPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDAL
                     QELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEPG
                     KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN
                     AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQK
                     GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLA
                     NGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH
                     PQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISR
                     YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLK
                     LKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL"
BASE COUNT          397 a          351 c          366 g          382 t
ORIGIN      
        1 ctgcctgtcg gcttaagcat ctggctggcc catcagcagg tagaaacatc gtttattgaa
       61 gagctggata cctattcctc ccgcgtcgct attcgggcca ataaggtggc gacacaaggg
      121 aaagatgcgc tgcaagagct ggaaagatgg caaggcgctg cctgtagcga agcccatctc
      181 atggaaatgc gtcgggtatc ttacagttat cgctatattc aggaagtggt ttatatcgat
      241 aacaacgttc cccagtgttc gtctctggag catgaaagtc cgcccgatac cttccccgag
      301 ccaggtaaaa tttcgaaaga tggttatcgt gtctggttaa catcgcataa cgatttaggc
      361 attatccgtt acatggtcgc catgggaacg gcacattatg tcgtcatgat cgaccccgct
      421 tcctttattg atgtcattcc ctatagctca tggcaaattg atgccgccat tattggcaat
      481 gcccataacg ttgtcataac cagcagcgat gaaattgctc agggaattat taccaggcta
      541 caaaaaacac ccggtgagca tatcgaaaat aatggaatca tttacgatat cctgcccttc
      601 ccggagatga atatttcgat catcacctgg gcttcaacga aaatgttgca gaaaggctgg
      661 catcggcaag tctttatttg gttaccgctc gggttggtga ttggcctgct ggcagcgatg
      721 tttgtgctgc gtattttgcg ccgtatccag tcaccgcatc atcggctgca ggatgctatc
      781 gaaaatcgtg atatttgcgt gcactatcag ccgattgtct ccttagccaa tggcaaaatt
      841 gtcggtgctg aggcactggc gcgctggccg caaacagacg gtagttggtt gtcaccagat
      901 agttttattc cgctggcaca gcaaacaggc ctttctgagc cattgacgct actgattata
      961 agaagcgtct ttgaagatat gggcgactgg ctgcgtcagc atccacagca gcatatttcg
     1021 atcaatcttg aatccaccgt gctcacctcg gaaaaaatcc cgcaattgct gcgtgaaatg
     1081 atcaatcact atcaggttaa tcccagacag atcgcgcttg aactcactga acgcgagttt
     1141 gccgatccga aaaccagcgc cccgataatt tctcgctacc gggaggcggg ccatgaaatt
     1201 tatcttgatg attttggtac gggatattca agtttaagtt atttacagga tctggatgtc
     1261 gacattctga agatcgataa atctttcgtt gatgcgctgg aatataaaaa tgtcacgccg
     1321 catatcatcg aaatggcaaa aacactgaaa ctgaaaatgg tagcggaggg aatcgaaacc
     1381 agtaaacaag aagagtggct acgccagcat ggcgtgcact acggtcaggg ctggctctac
     1441 agcaaggcat taccgaaaga agatttctta cgctgggccg agcaacattt gtgaat
//
LOCUS       DADKRT010000333         1488 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.338, whole genome shotgun sequence.
ACCESSION   DADKRT010000333 DADKRT010000000
VERSION     DADKRT010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.338"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..733)
                     /gene="pdeC"
                     /locus_tag="JQ356_004268"
     CDS             complement(<1..733)
                     /gene="pdeC"
                     /locus_tag="JQ356_004268"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY4624138.1"
                     /translation="MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRT
                     FAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDN
                     HFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFSSGYKMTYMQRGNYVAVINPL
                     FWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVY
                     STKRPIAAIVATSYQRLITHFYNHLI"
     gene            1163..1444
                     /locus_tag="JQ356_004269"
     CDS             1163..1444
                     /locus_tag="JQ356_004269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624139.1"
                     /translation="MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISS
                     GLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT"
BASE COUNT          432 a          325 c          333 g          398 t
ORIGIN      
        1 aaataagatg attataaaaa tgggttataa gacgttgata tgaagtcgca acaatggctg
       61 caattgggcg ttttgtcgaa taaactgtcg catataaata gccatttctt tgtacggtta
      121 aatccttcaa atgaatcagc ggagaaaacg ttgctgccga ggcctctttg cttaacgaga
      181 aaaaggtttt cgtcaccgta tcatacacac cccattgcaa tgtcggatca tcagacatca
      241 cttcactcca gaagagaggg ttgataaccg ccacataatt tccccgctgc atataggtca
      301 ttttatagcc agaggaaaaa ggcgtatcgc ggtaataata gatagaaacg ttaggttcac
      361 gcttataatc ggccggtgca atcgtatagc cgtttacagg cgctatcagc gatgagcata
      421 aaaaatggtt atcacgggca tagatcaatt cattaatata aagatagcca cgaataatat
      481 tcaacattcg cttttgatgg gctggagtgc aaacttgccc ctgatagcgt tcagctgcat
      541 cgctcactaa atctgcctgg cgaatgacca gctcggattt atccagtgcc agttgagcaa
      601 aggttcggag ctgattattc acttctgatt ttgcccaaag gaaggcaatc catagcgaaa
      661 gaatgatggg aaagagaact aaaaagataa tgcccggcaa cgccagtaat tggtgtcgtg
      721 cacgatgact cattgctatc aatttcctgc ctgtttatac ccggccattg taaggtgaaa
      781 accctgggta ccgacgtctt tagataaatc ttacggtata aatagcactt ttgcctgatt
      841 tgaaattgat acctttctaa tcgtcacctg gatgaaaata attcattgat attcaaaatt
      901 aatttcctac aggaatgcag aggcggcggg aagatatgcc cttaatgcca ctgaaaaacc
      961 acataatctg tacagcaata aaagtcacgg cctaatatgg ctaacaaaca atcaattgtg
     1021 atatatttca caaaattaat gaaacaaaca gagtgtttca tttttgtgtt ctgcaagccc
     1081 cgcgatagcc agagtgtacc acgcctcccg tgaacaacgc cgcgctgtcc agggcatcgg
     1141 ctcttttcag aggaattgtt tgatggctac cctcaccact ggcgtggttc ttcttcgctg
     1201 gcaacttctt agtgccgtaa tgatgtttct ggccagcaca ctcaacatcc gttttcgtcg
     1261 gtctgattat gtcgggcttg cggtgatcag cagcggtctg ggcgttgttt ccgcctgttg
     1321 gttcgcaatg gggttgcttg gcatcacaat ggcggacatc accgctatct ggcacaacat
     1381 cgagtcggtg atgatagaag agatgaatca gacaccgcca caatggccaa tgattttgac
     1441 ctgatacgta gaagcctcca taacggagta atgccgatca gttaagga
//
LOCUS       DADKRT010000334         1451 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.339, whole genome shotgun sequence.
ACCESSION   DADKRT010000334 DADKRT010000000
VERSION     DADKRT010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.339"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..161
                     /locus_tag="JQ356_004270"
                     /pseudo
     CDS             1..161
                     /locus_tag="JQ356_004270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            178..696
                     /locus_tag="JQ356_004271"
                     /pseudo
     CDS             178..696
                     /locus_tag="JQ356_004271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1165..>1451
                     /locus_tag="JQ356_004272"
     CDS             1165..>1451
                     /locus_tag="JQ356_004272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624140.1"
                     /translation="MIVLILVFRLVIGVQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
                     MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQI"
BASE COUNT          414 a          339 c          330 g          368 t
ORIGIN      
        1 gtgacagact ggcacgtctt cgtaaggagc tgaggctgca ctgtaagcag aaacgcaagt
       61 tcagggcgac cacaaactct gaccacaatc tgccggttac gccgaatctg ctgaatcaga
      121 actttacgcc cacagcacct aatcaggtct gggtcgcaga ttcagttgtc caggccttcc
      181 gaaatcaacc gactgaaggc gctggtcgcg aaactgcagc gtatgcagtt cggtaaaagc
      241 tcagaaaaac ttcgcgcaaa aaccgaacgg cggatacagg aagcacagga gcgaatcagc
      301 gcacttcagg aggaaatggc ggaaacactg ggtgagcaat atgacccggt actgccatct
      361 tccctgcgcc agtcttcagc ccgtaaaccg ttaccagcct cacttccccg tgccccccgg
      421 gtcatccggc cggaagagga atgctgtccg gcctgtggtg gtgaactcag tccactggga
      481 tgtgatgtgt cagagcagct ggagcttatc agcagcgcct ttaaggttat cgaaaaacaa
      541 cgccctaaac tggcctgtcg ccggtgcgac catatcgtgc aggcaccggt gccttcaaaa
      601 cccattgcac gcagttatgc cggagcgggg cttctggccc atgttgttac cggaaagtat
      661 gcagaccatc tgccattata ccgccaaagt gatctactat tccacacagc tatttagctc
      721 tctttttgtt gagctcccat gattctttca tttattgtta ctaattattt tatgttatca
      781 tgatgttaga acacgctctg ctctgtgtct ctattttatc tatcatattc tgaggattaa
      841 ctacataaca aggcgcaaga tatatatcca aaaacaaata ataccgttgc aataattcct
      901 ttcagtaaag gaggtgtgat taatttcagg ggatttcaga gtgaaaattg tacaacatat
      961 tgaaatatgt tcatttcgtt ataatacaca caagaaaata ttaagttaga taatatattc
     1021 taaataacca tagataaaaa tgcacataat ggggaatatt ttatgaaaat acctgaagca
     1081 gtaaatcata ttaatgttca gaataatatt gatcttgtta gactggcccc ctgaatctcc
     1141 agacaaccag tatcacttaa ataagtgata gtcttaatac tagtttttag actagtcatt
     1201 ggagtacaga tgattgatgt cttagggccg gagaaacgca gacggcgtac cacacaggaa
     1261 aagatcgcaa ttgttcagca gagctttgaa ccggggatga cggtctccct cgttgcccgg
     1321 caacatggtg tagcagccag ccagttattt ctctggcgta agcaatacca ggaaggaagt
     1381 cttactgctg tggccgccgg agaacaggtt gttcctgcct ctgaacttgc tgccgccatg
     1441 aagcagatta a
//
LOCUS       DADKRT010000335         1406 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.340, whole genome shotgun sequence.
ACCESSION   DADKRT010000335 DADKRT010000000
VERSION     DADKRT010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.340"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..122)
                     /gene="ariR"
                     /locus_tag="JQ356_004273"
     CDS             complement(<1..122)
                     /gene="ariR"
                     /locus_tag="JQ356_004273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm/acid-resistance regulator AriR"
                     /protein_id="HAY4624141.1"
                     /translation="MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTN"
     gene            complement(151..423)
                     /locus_tag="JQ356_004274"
     CDS             complement(151..423)
                     /locus_tag="JQ356_004274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YmgA"
                     /protein_id="HAY4624142.1"
                     /translation="MKTSDNERIKYEITGQVVLQILRMKINFSLQTLIKQLLVMKSAE
                     EDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH"
     gene            complement(466..702)
                     /locus_tag="JQ356_004275"
     CDS             complement(466..702)
                     /locus_tag="JQ356_004275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YcgZ"
                     /protein_id="HAY4624143.1"
                     /translation="MHQNSVTLDSAGAITRYFAKANWPTQQETLGEIVTEILKDGRNL
                     SRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE"
     gene            1016..>1406
                     /gene="bluF"
                     /locus_tag="JQ356_004276"
     CDS             1016..>1406
                     /gene="bluF"
                     /locus_tag="JQ356_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue light-responsive regulator BluF"
                     /protein_id="HAY4624144.1"
                     /translation="MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNG
                     SHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHER
                     DDVLQAVFDKGTSKFQLTYDDRALQFFR"
BASE COUNT          412 a          289 c          252 g          453 t
ORIGIN      
        1 aaattggtga cagcctgccc taacactgct gactcttctt ctaacaaatt acccgaactg
       61 cgaaagtaac ttgctaacgc tttatcagtt attgcattat gaattgtagt atcttcaagc
      121 atggtaacct ctcatcttac ttatgaaatt ttaatgtatt ctgtttattt tcttaccatt
      181 gaacatactt ttattgtcag ctgtcgctgt tcttcggttt ggccctcctg aatcactatt
      241 gctaaaatca cgaattatgc tgtcaattaa atcgcgtcgg aaagcatctt cctcagccga
      301 tttcattacg agtaattgct taataagagt ctgcaatgaa aaatttatct tcatgcgcag
      361 tatctggagc accacctggc cagtaatttc atattttata cgttcattat cagatgtctt
      421 cataacgact tcatagctaa cctgttaaat aatcaggctg ttgcattatt caaaaagcaa
      481 cccaattagt gcattataat gtttctgttc ctcttcccca gtcgcgtgtt ccagtcggca
      541 aagaagtttg gcacaaagcg actttcgact cagattacgt ccatctttca aaatctcagt
      601 cacaatttcc ccgagagttt cctgctgagt aggccagtta gcttttgcaa agtaacgagt
      661 gattgctccc gcagaatcta aagtcactga attttgatgc atgctacgcc tctgttaaaa
      721 atgttaatca atgttaagtg aggtaacaat agcaaacttg tacgaaatat gtgtacagaa
      781 tgataaatta attttttgca attagtgcca atacatataa aacaatgtgt tatgataaaa
      841 catattgcat catttaactg acaatctata cgagattttt cgccaactag tgttcaactt
      901 tttccatttt ttatcaatgt aaagaaacgg ttatgttttg gtattaaaag aaagacacaa
      961 gaagatatgt ctgttaccgt cttactctcg cctcacccat taccctggat tgttaatgct
     1021 taccaccctt atttatcgta gccatatacg tgacgacgaa cctgtcaaaa aaatcgaaga
     1081 aatggtttcg atagcaaatc gcaggaacat gcagtctgac gtaacaggga tcttactgtt
     1141 taatggttct cattttttcc agcttctgga aggtccggaa gaacaggtta aaatgatata
     1201 tcgggctata tgccaggatc cacggcacta taatattgtt gagctgctgt gcgattacgc
     1261 gcctgctcgc cgttttggca aagcgggaat ggaattattt gatttgcgcc tgcacgagcg
     1321 agatgacgtt ttacaggccg tattcgacaa aggcacatca aaatttcagc taacttatga
     1381 tgacagagcg ctacaatttt ttcgta
//
LOCUS       DADKRT010000336         1397 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.341, whole genome shotgun sequence.
ACCESSION   DADKRT010000336 DADKRT010000000
VERSION     DADKRT010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.341"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            7..690
                     /locus_tag="JQ356_004277"
     CDS             7..690
                     /locus_tag="JQ356_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000856940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HAY4624145.1"
                     /translation="MKTQHDHYDRLSVRLSVIISRLLAGESLELKALADEFGVSERTL
                     QRDFQQRLIHLDLEHSSGSYRLTCRTGREHSPNTFAFIRNSGISGIIPAQNRRLIRLI
                     TSNSGSSPCLIGHGGLPSPVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIF
                     QSKNWFLVATRTRNLQVFRMEDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFI
                     SDVIQTFRE"
     gene            729..>1397
                     /locus_tag="JQ356_004278"
     CDS             729..>1397
                     /locus_tag="JQ356_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HAY4624146.1"
                     /translation="MNDPVKGEGRMITDASGVTRREGGILGMWSNIFPERNGSNEQKG
                     DSKPHIPDIRDILDIFPQPLREKLLNKISEAIDYEPVIGVMGKTGAGKSSVCNALFKG
                     EVCAVSDVEACTREVQELRIRFGKHSLKIIDIPSVGENARRDKEYEYLYRNLLPSLDL
                     ILWVIKGDDRAFSADEHFYNNVLLPAGGGERVLFVLNQVDKIEPFREWDTHLHQPSPA
                     QRINI"
BASE COUNT          364 a          332 c          346 g          355 t
ORIGIN      
        1 cccactatga aaacacagca tgatcattat gaccgcctgt ccgtcaggct atcggtcatt
       61 atcagccgct tactggctgg cgaatctctg gagcttaaag cgttagctga tgaatttggt
      121 gtctcagaac gcaccctaca gagggatttt cagcaacgcc tgatccatct ggatctcgag
      181 cattccagcg gaagctaccg acttacctgc cgaacgggcc gggagcactc acccaacaca
      241 tttgcgttca tccgtaattc cgggatttca gggattattc cggctcagaa tcgcaggtta
      301 attcgactga ttaccagtaa ctccggaagc tcaccgtgcc ttatagggca tggagggctg
      361 ccatctccag ttacacaaac cgcctgtttt ctggaactgg cggaagctat ccgtgactac
      421 cgcgccgtta cattattagt taacggtaaa agctacgaag cagtagctcc ccgccgtctg
      481 atatttcagt ccaaaaactg gtttcttgtt gctacccgca ccagaaattt acaggtgttt
      541 cggatggaag atgttaacgc cgtaaccgtt ctggatacct cttttcgcag aaagcctgaa
      601 cttgatgctc tgactgccag tgaagagttt atttcagccc tccctcactt tcgtttcata
      661 agtgacgtaa ttcagacctt cagagagtaa cagacaacgt tcatttcaaa ttaaaaagga
      721 gacctcgtat gaatgacccg gtaaagggcg aaggccggat gattactgat gccagtggcg
      781 tcaccagaag ggaaggcggg attttgggaa tgtggagcaa tatatttcca gaacgtaatg
      841 gtagcaacga gcaaaaaggt gatagcaagc cgcacatacc cgacatcagg gatattcttg
      901 atattttccc tcagccactg cgggaaaagc tgttgaacaa aatcagtgaa gccatcgact
      961 atgaacccgt gattggtgtc atgggaaaaa ctggcgcggg gaaaagcagc gtatgtaatg
     1021 cgctgtttaa aggggaggtt tgtgcagtta gcgacgttga ggcatgtact cgcgaagttc
     1081 aggaattgcg tatacgcttc ggcaaacatt cgctaaagat cattgatata cctagtgtcg
     1141 gtgagaatgc ccggcgggac aaggagtatg aatatttata ccgtaatttg cttccctccc
     1201 tggatcttat cctgtgggta ataaaaggag acgatcgggc cttttctgcg gatgagcatt
     1261 tctacaataa tgttctgctc cctgctggtg ggggtgagcg cgttttattc gtcctcaacc
     1321 aggttgataa aattgagcca ttccgcgagt gggatactca tctgcatcag ccatctcctg
     1381 cacagcgcat caacatc
//
LOCUS       DADKRT010000337         1371 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.342, whole genome shotgun sequence.
ACCESSION   DADKRT010000337 DADKRT010000000
VERSION     DADKRT010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.342"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..483)
                     /locus_tag="JQ356_004279"
     CDS             complement(1..483)
                     /locus_tag="JQ356_004279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4624147.1"
                     /translation="MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNAS
                     RTFVICLEDTLRVVGYYSLATGSVTHAELGRSLRHNMPNPVPVVLLGRLAVDVCIQGH
                     GFGKWLLSDAIHRVVNLADQVGIKAVMVHAIDDDARAFYERFGFVQSVVAPNTLFYKV
                     "
     gene            complement(474..776)
                     /locus_tag="JQ356_004280"
     CDS             complement(474..776)
                     /locus_tag="JQ356_004280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY4624148.1"
                     /translation="MEVFMSTAASVRKTPREHQINIRATDEERAVIDYAASLVNKNRT
                     DFIMELAYQEAKNIILDQRLFVLDNERYDSFITQLEAPVQNAEGRERLMAVKPEWK"
     gene            1048..1320
                     /locus_tag="JQ356_004281"
     CDS             1048..1320
                     /locus_tag="JQ356_004281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_145811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624149.1"
                     /translation="MSHNLEHQKVHTRMVKEVLKAVARANNHPYKSVFADFITGHPSC
                     TVCFWETFHKMYPDSPYEYVTFCHTCRRFDLYETEAEMKADDPKWW"
BASE COUNT          402 a          349 c          292 g          328 t
ORIGIN      
        1 tcagacctta taaaacaagg tattaggtgc cacaactgac tgaacaaaac caaaacgctc
       61 ataaaatgct ctggcgtcat catcaattgc atgtaccata acagccttaa tgccaacctg
      121 atcagccaga ttgacaaccc ggtgaatggc atcacttagt agccatttac cgaaaccatg
      181 cccctggata caaacatcaa cagccagacg ccctaacaga acaacaggga caggattggg
      241 catgttatgc cgcaaactgc gaccaagctc ggcatgagtg acggaaccag tagctaatga
      301 gtagtatccc acaacacgta aagtatcctc caagcaaata acgaacgtgc gagaagcatt
      361 gagcatctgg tttttcatag cccgaccacg taaccagtta cttagcacct catttccaca
      421 gtcaaatggc tgaagtatat gctcatccgt caacaatgct ggcgcggtga catttatttc
      481 cattcaggct ttaccgccat cagacgttca cgcccttctg cattctgcac aggagcttcc
      541 agttgcgtaa taaacgaatc ataacgttcg ttatccagca caaataaacg ttgatccagg
      601 ataatgtttt tagcttcctg gtacgccagt tccatgatga aatcggtacg gttcttattg
      661 accaagctcg cagcataatc aataacggct cgttcctcat cagttgcccg gatgttaatc
      721 tgatgttctc gcggtgtttt acggacgctt gcagctgtag acataaaaac ctccattggt
      781 aacaatttgc tatgcaatta atgttatcgc aaatggtaac agaacgctat acagaatcac
      841 ttacgggaaa agcgatcccc tgataaaaac aatggcagag acctgaacat tgtgacgatg
      901 atctgtgtcg gcgcacaaat catgtctgat tacggccgtt taatgtgatt ttgataatga
      961 aatgcctgaa ccacggcagc ctggcggctg caaatcgggg tgtggcagaa tatgagcttt
     1021 cagagtaacc atccagaatg agttcccatg tcacacaacc tggagcacca gaaagtccac
     1081 accagaatgg tgaaagaggt tctgaaagcc gtcgccagag ccaataatca cccttataag
     1141 tccgtatttg cagactttat caccggtcat ccctcctgca cggtctgttt ctgggaaacc
     1201 ttccacaaaa tgtacccgga ttcaccgtac gaatacgtca cgttctgcca tacctgccgt
     1261 cgttttgatt tatacgaaac agaagcggag atgaaggcgg atgacccgaa gtggtggtga
     1321 ttttcagccc cgaccgctga aacgcctgtt cacagccaac cagtgctgga c
//
LOCUS       DADKRT010000338         1359 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.343, whole genome shotgun sequence.
ACCESSION   DADKRT010000338 DADKRT010000000
VERSION     DADKRT010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.343"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(340..606)
                     /locus_tag="JQ356_004282"
     CDS             complement(340..606)
                     /locus_tag="JQ356_004282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624150.1"
                     /translation="MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAA
                     IYELQIPATNRTKTLKFTATEMQWLTKINEVGIVEKQSQRHSNI"
     gene            complement(788..1186)
                     /locus_tag="JQ356_004283"
                     /pseudo
     CDS             complement(788..1186)
                     /locus_tag="JQ356_004283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612066.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          352 a          274 c          282 g          451 t
ORIGIN      
        1 aaagccgtct atgggaagga gtctgctgtt attccagaga atggtaattc agtcatatat
       61 ttctccatct atgacttgtc aataccatcc tgatatttgt gggtcagcaa tatattctac
      121 taaaaggtat ttaaggtcat tgcgtccctg cactcgaata atggtgaaga aagcatgatg
      181 aatatatcac gataacgttc agtatgtatc gaggatagat ggagttactc ctctctgaaa
      241 tagaattact gctctacttt ttctgtttcc agaaattatt agtaacaaac cctgatatat
      301 tcttttgaaa atggagctta aacgagtctg aaattaactt cagatattag aatgccgttg
      361 gctttgtttt tcaacaattc ctacttcatt tatctttgtc aaccattgca tttctgtagc
      421 agtgaatttc aacgttttcg tccggttggt agcaggtatt tgtaattcgt atatagctgc
      481 ttttttattg aaaacagtat atccatctgt agtaacagta gaagataata atacaggatt
      541 tgacacttca aggatgatat tttcttgttt ttgtggaagg caagggaata tagtttgtgt
      601 aagcatattg cttccttatg ttatatttta gtaaagaatt tattttttac attatagtcg
      661 gctaaatgaa gtttactgta aaaaaacgat acttttttcg taagcgatga gatgtggagc
      721 cagaaaaatg gctgcgttac gtcattgaac tgtccttgac ccacgatatt cagacagtcg
      781 ttgtatctta agttgacatt acccgctgac gtcgatattc ccttggtgag agataaccca
      841 acgcactatg cggatggttt tcattgtaat gctcgatcgc cactgcaagg ttatgcaatg
      901 ccgttcttgg tttcggcatg aacgcgatgc agtcttcctt catcgttttc acgaaccgtt
      961 ctgctattcc attactctga gggctactga ctgccgtcgt gcagggctcc agattcaact
     1021 ctctggcgaa ctgccgtgtt tcatgagccg tataagccga accgttatcg gccactggat
     1081 tggccgttcc ggtcctttat cgccatatcg ctgacatgac atcctgcacc gttgctttgt
     1141 cataatctcc cgtgcctgct gcccagtcta tggcttcacg atcgcaatat ggaacgtaac
     1201 gctgtcatcg ggagaatcgt caatgcggca ttcggttaac gctgatatga ctttccgtgt
     1261 caaaccggaa tctctaattt tgacgatttt ctttttaggt ttaattccct gagggcgacg
     1321 tagcagtaaa tccgacggtg aatcacgctg atattcgcg
//
LOCUS       DADKRT010000339         1343 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.344, whole genome shotgun sequence.
ACCESSION   DADKRT010000339 DADKRT010000000
VERSION     DADKRT010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.344"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            86..1005
                     /locus_tag="JQ356_004284"
                     /pseudo
     CDS             86..1005
                     /locus_tag="JQ356_004284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415843.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            1005..1217
                     /locus_tag="JQ356_004285"
     CDS             1005..1217
                     /locus_tag="JQ356_004285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY4624151.1"
                     /translation="MKHIQIRNSDMAWHIAANIQFPPNFDESKQYPAIISVHPFGSCK
                     EQTSGNIYGKALAEKGYLVLAYDASF"
BASE COUNT          380 a          300 c          326 g          337 t
ORIGIN      
        1 tttagggtct aatcaactta atgatcaata tctatagtga tattaccaac cgttaaaacg
       61 aaccgacaac tccatgagga acggaatgat gaataataaa gtcagcttca ctaacagcaa
      121 taatccaacc atctctttgt ctgcagtgat ctatttccct ccaaaatttg atgaaacccg
      181 tcagtatcag gcaattgtgg tatctcaccc aggtggggcg ttaaagaaca aacggccgga
      241 acctatgcca aaaaactggc ggaaaaggga tttgtcacta ttgcttatga cgcatcttat
      301 caaggtgaaa gtggcggcga gccgcgtcag ttagaaaacc catacattcg tactgaagac
      361 atcagtgccg tgattgatta cctgacaacg ctttcttatg tcgacaatac ccgaattggt
      421 gcgatgggaa tttgtgccgg tgcaggatat acagccaatg ctgcaattca ggatcgccgc
      481 atcaaggcca tcggtaccgt tagtgcggtc aatattggtt cgatgttccg taatggttgg
      541 gaaaacaatg tgaaatctat tgatgccctg ccatacgttg aagcgggttc aaacgcccga
      601 accagcgata ttagcagcgg agaatatgcc gttatgccac tggcaccaat gaaggagtcc
      661 gatgcgccga acgaagaact gcgtcaggcc tgggagtatt accacacccc tcgcgcgcag
      721 tatccaacag caccgggtta cgctactttg cgcagcctta accagattat tacctttgat
      781 gcttaccata tggcggaagt gtacctgact cagccgatgc agattgtggc gggcagccag
      841 gcagggagca aatggatgag tgacgatctg tacgatcgag catcaagcca agataaacgc
      901 tatcacattg ttgaaggcgc aaaccatatg gatctttatg acggcaaagc ctatgtggct
      961 gaagcaattt cagtattagc tccgttcttt gaggaaactc tgtaatgaaa catattcaaa
     1021 tccgcaatag tgatatggcc tggcatattg ctgccaatat tcagtttcca ccaaattttg
     1081 atgagtcaaa acagtatccg gcgattatca gcgtccatcc ttttggcagt tgtaaggagc
     1141 agacgtctgg caatatctat ggcaaagcat tggctgaaaa aggctatctc gttctcgctt
     1201 atgacgccag tttctaggga gaatctggtg gggagcctcg ctggatagaa gatccgacac
     1261 agcgcgtaga ggatattagc cgtgttatcg attatgcagt aactctgcca tatgttaatg
     1321 ctgaacgtat tggcgtgctg gga
//
LOCUS       DADKRT010000340         1335 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.345, whole genome shotgun sequence.
ACCESSION   DADKRT010000340 DADKRT010000000
VERSION     DADKRT010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.345"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..173)
                     /locus_tag="JQ356_004286"
     CDS             complement(<1..173)
                     /locus_tag="JQ356_004286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624152.1"
                     /translation="MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLN
                     PAQPHLLTAPEIWL"
     gene            complement(206..427)
                     /locus_tag="JQ356_004287"
     CDS             complement(206..427)
                     /locus_tag="JQ356_004287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HAY4624153.1"
                     /translation="MRPNISITLTTPHVTIERYSELTGLSIDTINDMLADGRLIRHRL
                     RKDKKREKVMINIAAMTVDALSECNLNLN"
     gene            553..1122
                     /locus_tag="JQ356_004288"
     CDS             553..1122
                     /locus_tag="JQ356_004288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001047316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein"
                     /protein_id="HAY4624154.1"
                     /translation="MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRD
                     SFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYIFD
                     KGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
                     EGGNRAFECKIEDIEIIGKIISLTVKYVR"
     gene            1138..1329
                     /locus_tag="JQ356_004289"
     CDS             1138..1329
                     /locus_tag="JQ356_004289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624155.1"
                     /translation="MLGKVFFVVLSCSLLLSPLTTYAKNYPCSGKKGGVSHCTSDGKF
                     VCNDGTISKSKKICTKNSR"
BASE COUNT          397 a          241 c          300 g          397 t
ORIGIN      
        1 agccagattt ctggtgcggt taataaatga ggctgagctg ggttcagctt gttccgcaga
       61 atctgcacat tcatgcctgc acgttctgcc agttgcacca gattgtggcg cagtgcaaat
      121 gcacgacagg cttcatcaaa atgtggatgt ttggaaactt ggtaatcaaa catggtcaat
      181 gcctctgatg tatttcagaa tcgaactaat taaggtttag attgcattct gaaagcgcat
      241 caacggtcat tgctgctatg ttgatcatca ctttttcgcg ttttttatct ttgcgcagac
      301 ggtgacggat aaggcgtcca tcagccaaca tgtcattgat ggtatcgatg gatagccctg
      361 tcagctcgct atagcgttca atagtcacat gaggcgtggt aagagtgatt gaaatgttag
      421 gtctcatgat gcaacattcc tcgtttaatg atgattaatc aggacgaata cggatcgttt
      481 gtattttgtg aacaccataa acatacgatt gcacagtgaa atcgtcaaga taaaagttca
      541 cttggagtga ccatgaattt ggagaaaggc ggacgaggcg ccatagagcg catggtagaa
      601 gcttatggat tcaagactcg acaggcgttg tgcgatcatt taggaatctc taaaagtaca
      661 ctcgccacac gctacatgcg tgactcattc ccagcagaat gggtaatcca gtgcgccctt
      721 gaaacgggca cctcgcttaa ttggctcaca accggacatg gttcaaagca aacttcaggt
      781 aatacaaata ctatggaagt tgctaaatat gtattatctg atggtgcctt gcgtgaagac
      841 ggtttttata tttttgataa gggatttcta ccctctacgt ttaaaaaacc ttttgtcatc
      901 acagataaca attctgaatt tatttgtgat aaagaatttg atgacatacg tgatggtaaa
      961 tgggtaataa gtattgatgg cgaagtaacg atccgtgaca ttactcgttt acccggtgga
     1021 agaatcttcg tcgagggtgg aaacagagcc ttcgaatgta agatagaaga cattgaaata
     1081 attggtaaaa ttataagttt aacagttaaa tatgttagat aataccggga ggaaactatg
     1141 cttggtaaag tattttttgt ggttttatca tgctctttgt tattaagccc actaactacc
     1201 tatgctaaaa attatccttg ttctgggaaa aagggaggtg tctctcactg tacctccgat
     1261 ggaaaatttg tttgcaatga tggaactatt agtaaatcca aaaaaatctg tactaaaaac
     1321 tcacgataac ttttg
//
LOCUS       DADKRT010000341         1327 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.346, whole genome shotgun sequence.
ACCESSION   DADKRT010000341 DADKRT010000000
VERSION     DADKRT010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.346"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(170..499)
                     /locus_tag="JQ356_004290"
     CDS             complement(170..499)
                     /locus_tag="JQ356_004290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310836.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HAY4624156.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE
                     MKNGEAK"
     gene            complement(671..>1327)
                     /locus_tag="JQ356_004291"
     CDS             complement(671..>1327)
                     /locus_tag="JQ356_004291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HAY4624157.1"
                     /translation="TGEIDTALWRSGDVLLGSLLAMLFTGIWPQRAFIHWRIQLAKSL
                     TEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQT
                     INRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPV
                     FANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK
                     "
BASE COUNT          326 a          310 c          311 g          380 t
ORIGIN      
        1 agtgcggtta ataacaatgg agttacagaa ctttttgcct tgctgcatac agaagatgtc
       61 tgtcgctaat ttcggtaagt tatcagatgg gaatgatgac ggtgatacac agaaaagaat
      121 caatgagcaa tgagggttgc caggcaaccc tcattgaata aaacaggaat tacttcgctt
      181 cgccgttttt catttcgccc atagctttca gctttttgga gatatcgcgg cgttctttgg
      241 agagctcggc atttttgatg atgtaatcgt caacgcgatc ttcatagtca cctttcatgc
      301 tggcgatgat gccctggatt gcttcaacgc tcatccccgg cttgatgtaa tcgctcaggt
      361 tgtccagcag caggacgcgc ttctggttgt cacggatctt tttctcaacg tcctgaattt
      421 cacgttgcag tttgttctta cgacggaaca gacgaacaaa ttccagtacg tcctggaatg
      481 aaggcttggt agtttccatt tttatacccc tgataatgtg agagtcggat tcgtttaagc
      541 aaccgctatc cgttagagcc aacattactc atagctgccg cagatgacaa tgcttttatc
      601 ccttttcact atcataccct ttatccttgc tgaatcgaag cagcagcaag atgattctgt
      661 agttcaggaa ttatttgcgc aaggcccggc aaatcagatt cgatagcaac tcaagctgat
      721 gtgccgtttc catgttcagc cacacataac catagattgg tgtttccaca accttcaggt
      781 catggtggtt attgagcaac tgacgcagct cttccactgc atcgttcaat ttttccgtat
      841 tggcaaaaac cggctgcgga ttaccttcgt acaacgcatg aacaaggctc agcagtattt
      901 gctgcatcat gtgctgggta tcacgaagtt tttgcgcgtt caataacacg aaatggctgg
      961 ggcgcgtggc ccagtacgca ttgatttgca actccagcat acaaaccaga ttgcggttaa
     1021 tggtctggat accttcatat atcgattttg gaatacgggt ttctttgctg gcgggcgcaa
     1081 tcagcccacg cattttcacg gcatcggtca ggagtttttg tagatggctt tccagacgtg
     1141 ggcgttcgag taagttcggt gagaatgcag attgatagac ccgattatac tcggtcagac
     1201 ttttcgccag ttgaatgcgc cagtggatga acgcccgttg tggccagata ccggtaaaca
     1261 acattgccag taaagagccg aggagcacat cgccgcttcg ccataacgcc gtatcaattt
     1321 cacctgt
//
LOCUS       DADKRT010000342         1326 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.347, whole genome shotgun sequence.
ACCESSION   DADKRT010000342 DADKRT010000000
VERSION     DADKRT010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.347"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..>1326)
                     /locus_tag="JQ356_004292"
     CDS             complement(<1..>1326)
                     /locus_tag="JQ356_004292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase"
                     /protein_id="HAY4624158.1"
                     /translation="GSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDV
                     IIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGE
                     NLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTE
                     LIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGF
                     RTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVH
                     TTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKCVL
                     PAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGY
                     AKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLP"
BASE COUNT          342 a          363 c          284 g          337 t
ORIGIN      
        1 aatggcaagc cggaaccaat aaagttgata tgggtatgtg tcatgcagtc acggttgaac
       61 atacagttaa caatggaacc gacctgcgct gacgcttcat tggcatggtg aaccggatag
      121 ccaaacggcg accagagttt atttttcgcg tagccccagt actcttcacc caaattccag
      181 cgttctgcga tggcatatga accatcagcc aggtgactca gctcacccac acgatgcgcc
      241 agacggtagt aaaaatcttt aatgaaatta acgtcacccg cttccagttg atcccagtga
      301 atttccgcat actcttcagc aggcagaaca cacttgaaca cccctttgct gtaacaataa
      361 gtaaagtcgc gatgcaactg cccgtagtta caccataggc cgtagtcatc gaacaaattc
      421 agaccaacca agttaccaat cacacggcca tcgtctttat cttcaaaatc tttcggaccg
      481 ttcgggaaga tggtggtatg gacaaagttg gctacacaag tgttaccacc tgtgctgggc
      541 acgccaaact ctttcacccg aggaatattc atttgggtca tacaacggat cgggcaagag
      601 tggcagccac tcatttttac tgtgtatttc tctgccgccg gacctaagtc aaaaacggat
      661 ttataggtac gaaagccgac cgtgttctga ttgcctggcg gaatttcccc cgtttcaatc
      721 ggaccacctt cagccgcgcc ccaaaacagc cctttacgtg ctgtccaacg tgacttggga
      781 tctgaatact ctgcccacga ttgcggcgta cttggcacga catggttgtt attcgcacca
      841 ataagttcag tcatcatgta atcgttgaga cgcttcatct cctgacgatc ggcaatgttg
      901 acccctttcg tcccttcaac cgcaatcgct ttcaggtttt tcgaacccat aattgcgcca
      961 gttcccgcac cgccgctgtg gttacggcta ttcaacatgc cagagagagg aacaaggttt
     1021 tccccagcct ggccaatagc cgccacacag gtttccggac tggtcaatcg acaaatttct
     1081 tccgtcgttg cgcgcgtccc ttttccccat aagaaatcgg ctttttccag gctaactttg
     1141 tcatctttaa tcttcagcca taccggtgat ttcgccttcc cttcgataat aatgacgtcg
     1201 tatccagcga atttcatttg cgctgcaaaa aagccaccca tatgggcatc gacaactaaa
     1261 tttcctttgg taaaagtaga aagtgaggtg atatttacgc gagaactaca gggggcacca
     1321 gatcca
//
LOCUS       DADKRT010000343         1318 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.348, whole genome shotgun sequence.
ACCESSION   DADKRT010000343 DADKRT010000000
VERSION     DADKRT010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.348"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(35..190)
                     /locus_tag="JQ356_004293"
     CDS             complement(35..190)
                     /locus_tag="JQ356_004293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624159.1"
                     /translation="MILRHRTGPAFQAIKDSLAVGLNALTLTDITKNATYGVEIESLV
                     LEINAPA"
     gene            complement(187..375)
                     /locus_tag="JQ356_004294"
     CDS             complement(187..375)
                     /locus_tag="JQ356_004294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY4624160.1"
                     /translation="MAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGDVVVSGATEPE"
     gene            636..971
                     /gene="iraM"
                     /locus_tag="JQ356_004295"
     CDS             636..971
                     /gene="iraM"
                     /locus_tag="JQ356_004295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HAY4624161.1"
                     /translation="MKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFT
                     LTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCTLQIC
                     PYGLKQQSP"
     gene            complement(1252..>1318)
                     /locus_tag="JQ356_004296"
     CDS             complement(1252..>1318)
                     /locus_tag="JQ356_004296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001611307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3927 domain-containing protein"
                     /protein_id="HAY4624162.1"
                     /translation="VLVAGVVVVAFPLLKKKTPDC"
BASE COUNT          417 a          333 c          228 g          340 t
ORIGIN      
        1 aacaaatggt agtgtccgct attgccagta cacctcatgc cggtgcattt atctccagca
       61 ccagactttc tatctcaacg ccatacgttg catttttggt aatatccgtc agcgtcagtg
      121 catttagtcc cactgccaga ctgtctttta tggcctggaa tgccgggcca gtacgatgac
      181 gtagtatcac tccggctcag ttgcaccact gaccaccaca tcaccttctg ctgcaatcgc
      241 ctgcatcagg gtataagggg ttatggccac cggactacca aacggctgcc agccctcttt
      301 cagtttatgt gtcagctttt ccgcaagatc tgacggcggc gccgccctga caacatcata
      361 gtgtttaaat gccatggttc tttccaccat ctgaaaaata attctttaaa atacctgaca
      421 tgtaatacag aaaaaacaca aaaccatacc ttaaataaaa acctgattat caagcagata
      481 tgcatggata aactacaaga cgagatataa accaccctgc atttaaataa acaataaaca
      541 acatcagaaa aataattctg ctctatggtt tacattcaaa aatatcattt atacttttca
      601 gaacatcacc agcaaggcat aaacaaggaa actaaatgaa gtggattgtg attgatacag
      661 ttatccagcc atcatgcgga atatcttttt cagtcatatg gagtaaaata aaattaataa
      721 tctggtatca atcggatgct ttcttacctc ctgaaagtat atttacactg actcacacag
      781 gcatcatgct caataacaaa gtgctacctg taaccattta caacgtagta ccattcaata
      841 aaacattctg gaatttaatc aaaaacagcc aggaatgccc tacaaataca gataacgtat
      901 tgaatgaatg ctttaataac cgttgcactc tgcaaatatg tccttatgga ctaaaacaac
      961 aaagtccata aggagtttac tcacatctga caaaatcaat ataaacagcc cctccggaga
     1021 ggggctggag agtggcgcta tgtgccattg catggtgccg ggtgcctccc ggtgaattca
     1081 gtaccagcac ctgaatccgc gattatccca tatacctact cgctgattgc ccctccgcac
     1141 agggggattc accatgccag tttcttttaa caaactcccc gcaaaccaga caacagtcaa
     1201 ccgcctgaat tgtgaagtat ttaaaaattt ctcccgctaa ctgatacccg gctaacagtc
     1261 tggcgttttc tttttcagca acgggaaagc aacaactacc acacccgcca ccagcaca
//
LOCUS       DADKRT010000344         1292 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.349, whole genome shotgun sequence.
ACCESSION   DADKRT010000344 DADKRT010000000
VERSION     DADKRT010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.349"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            218..>1292
                     /locus_tag="JQ356_004297"
     CDS             218..>1292
                     /locus_tag="JQ356_004297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY4624163.1"
                     /translation="MAFKHYDVVRAASPSDLAEKLTHKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGAVISATSDPEYYFVVVLAGQSNGMSYGEGLPLPGTYDRPDPRIKQLARRST
                     VTPGGAACKYNDIILADHCLHDVQDMSRLNHPKADLSKGQYGTVGQGLHIAKKLLPFI
                     PANAGILLVPCCRGGSAFTTGADGTYSDASGASENSTRWGVDKPLYKDLIGRTKAALE
                     KNPKNVLFAVVWMQGEFDFGGTPANHAAQFGALVDKFRADLADMAGQCVGGSAGGVPW
                     ICGDTTYFWKQKNESTYQTVYGSYKNKTEKNIHFVPFMTDENGVNVPTNKPEEDPDIR
                     GIGYYGSKWRDSSATWTSQDRASH"
BASE COUNT          309 a          315 c          386 g          282 t
ORIGIN      
        1 aagcccgcgc tgggagacgc gggcggcaag gaataaacaa taaaacgtga agtaatattt
       61 cagctggcga ataatacccc atagtagtca ctctgcgcaa ctgcgcggtc tttttcgaat
      121 tgcgggctgt cgtctctctt ctgccattgt cctgtaactt ccggacttca gcccgctcct
      181 cattttactc acaatattat cccggccggg aggattcatg gcttttaaac actatgatgt
      241 tgtcagggcg gcgtcgccgt cagatcttgc ggaaaagctg acacataaac tgaaagaggg
      301 ctggcagccg tttggtagtc cggtggccat aaccccttat actctgatgc aggcgattgc
      361 agcagaaggt gcagtaatca gcgccaccag cgacccggag tattactttg ttgtggttct
      421 ggcagggcag tcaaacggca tgtcgtatgg tgaaggcctt ccgctgccgg ggacatatga
      481 ccgtccggac ccgcgtatta agcaactggc gcgtcgcagt acggtgacac cgggcggtgc
      541 agcatgcaaa tataacgaca tcattctggc ggaccattgt ctgcatgatg tgcaggacat
      601 gagccgtctt aaccatccga aagcggacct gtcaaagggg cagtacggaa ccgtggggca
      661 ggggctgcat atcgccaaaa aactgctgcc gtttataccg gcgaatgcgg gcattctgct
      721 ggttccgtgc tgtcgtggtg gttcagcgtt caccaccgga gctgatggca catacagtga
      781 cgcgagtggt gcctcggaga attcaacccg ctggggtgtg gacaagccgc tgtataagga
      841 ccttatcggt cgaacaaaag cggcactgga gaagaacccg aaaaatgtgc tgtttgccgt
      901 ggtgtggatg cagggggaat ttgattttgg cggtacgccg gcaaatcatg ccgcacagtt
      961 tggtgcgctg gttgataaat tccgtgcaga cctggcggat atggcaggcc agtgcgtcgg
     1021 tggctctgct ggcggtgttc cctggatatg cggggacacg acgtatttct ggaagcagaa
     1081 gaacgaatcc acgtaccaga cggtgtacgg cagctataaa aataaaacgg aaaagaatat
     1141 ccatttcgta ccgttcatga ccgatgagaa cggggtgaat gtgccgacga acaaaccgga
     1201 agaagacccg gacattcggg gtatcggtta ttacggttcg aaatggcgtg acagctcagc
     1261 cacctggacg tcacaggaca gggcgagcca tt
//
LOCUS       DADKRT010000345         1290 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.350, whole genome shotgun sequence.
ACCESSION   DADKRT010000345 DADKRT010000000
VERSION     DADKRT010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.350"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..909
                     /gene="pocR"
                     /locus_tag="JQ356_004298"
     CDS             <1..909
                     /gene="pocR"
                     /locus_tag="JQ356_004298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein PocR"
                     /protein_id="HAY4624164.1"
                     /translation="SAATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPF
                     CQMMRQHPQLSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVL
                     CGQVRLRNDYVDLVDILNVDDCWQADPELLNEFRKVPEMDYSRVMASADLLKLIVENC
                     LKKQLNFVVIKENKSQSDSVRQTRAPSPHDNKMKKALRYIDAHLSDDLRLEDVASHVY
                     LSPYYFSKLFKKYHGIGFNAWVNQQRMASARELLCHSDWSIASIARNLGFSQTSYFCK
                     VFRQTYQVTPQVYRQQVSENAAMETV"
     regulatory      986..1161
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT          348 a          275 c          321 g          346 t
ORIGIN      
        1 tctgcggcga cacttaattc agaactcatt aataaaatcg cgcaggattt tgcgcaggcg
       61 accagccttg cggttgtcgt ggtcaatatt cacggcgatg aaatttccga gctgtttaac
      121 ttcactccat tttgtcagat gatgcggcaa caccctcagc taagcactcg atgtcgcatg
      181 agcgatcgtt gtgggggcct ggaagcctct aaatccgatc agccttgtat ttatcgctgt
      241 catgccggat taaccgattt ctctattcca ctggtaatcg ccgggcattt agtcggtttt
      301 gtattgtgcg ggcaagttcg tctgcgtaat gattatgtcg atttggtcga tattctgaat
      361 gtcgatgatt gctggcaggc agatcccgaa ttacttaatg aatttcgcaa agttcctgag
      421 atggattact caagagttat ggcctctgct gatttgttga agttgattgt agaaaattgc
      481 ctcaaaaaac aactcaattt tgtggttatt aaagagaaca aatctcagtc agattcggtg
      541 cgccagactc gtgcgcctag tccccacgac aataaaatga aaaaagcttt acgctatatt
      601 gatgcgcatt tatcagacga tttgcgtctg gaagatgtcg cctcgcacgt ttatctaagc
      661 ccttattatt tcagtaagtt attcaagaaa taccatggaa tcgggtttaa tgcgtgggta
      721 aaccaacaac ggatggccag cgcgcgtgag ttactgtgcc atagtgactg gagcatcgcc
      781 agcattgcgc gtaatttagg tttttcgcaa accagttatt tttgcaaagt tttccgtcag
      841 acttatcagg ttacgccgca ggtgtatcga cagcaagtga gtgaaaatgc ggcgatggaa
      901 acggtataaa aaaagggaag gtttaaataa acgctggaat gaataattaa cgttatttac
      961 gtgttatggg aaaagtaaaa tcagctcata acatacgctg acaggtgtgg cacatttgtg
     1021 cctgggaaga gagtgaaaat ccctcgcagc ccccgctgct gtaatgctga caaacccgaa
     1081 aatgccactg atcgcgagat tgggaaggtc gggagaggat gacgctaagc cagaagacca
     1141 gccagtcagt caataccaac aacttcggtg ggaagtgggt tgcccggaag cgtccggtag
     1201 agtacaggcg cgtctttata cccctaccac cctgaaagga tcagggtatg gcggcatcat
     1261 ttagttcttt catcgcagtg ccgacaggca
//
LOCUS       DADKRT010000346         1288 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.351, whole genome shotgun sequence.
ACCESSION   DADKRT010000346 DADKRT010000000
VERSION     DADKRT010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.351"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..220)
                     /locus_tag="JQ356_004299"
     CDS             complement(<1..220)
                     /locus_tag="JQ356_004299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624165.1"
                     /translation="MRVLLRPVLVPELGLVIVKPGRESMPVFHNTRVLVEPEPKSMRN
                     LPSGVVPAVRQPLVEDKTLLPFFSNARVI"
     gene            complement(222..494)
                     /locus_tag="JQ356_004300"
     CDS             complement(222..494)
                     /locus_tag="JQ356_004300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624166.1"
                     /translation="MAHKTKFHNSDTDLAIRHGRRSRAFKTDWYQHPPCTEEQAEWLI
                     HNYRRRGYEIKKALSLDYRHWIISVRLPYSERPPRPSRTFQQRIWR"
     gene            complement(662..874)
                     /locus_tag="JQ356_004301"
     CDS             complement(662..874)
                     /locus_tag="JQ356_004301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY4624167.1"
                     /translation="MSHKCRLASYVPKGKGKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFTAYEPEE"
     gene            complement(1055..>1288)
                     /locus_tag="JQ356_004302"
     CDS             complement(1055..>1288)
                     /locus_tag="JQ356_004302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624168.1"
                     /translation="CGRRAVAHYPGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCG
                     CVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE"
BASE COUNT          294 a          334 c          335 g          325 t
ORIGIN      
        1 gaatcacccg tgcgttactg aaaaacggca gcaatgtttt gtcttccact agcggctggc
       61 gaacggcagg aacgaccccg gacggcagat tacgcatgct tttcggttcc ggctccacca
      121 gtacccgggt attgtggaat accggcatgg attcacggcc cggcttaacg atcaccagcc
      181 cgagttccgg taccagaaca ggtcgaagta atacccgcac gttacctcca gatgcgttgc
      241 tggaatgtgc gggacggacg cggtgggcgt tcagagtaag gaagcctgac ggagattatc
      301 cagtgacgat aatcgaggct gagggctttc ttaatctcgt atccgcgtct gcggtagtta
      361 tgaattagcc attcggcctg ttcttcagta catggtgggt gttggtacca gtcggtttta
      421 aatgcgcgtg aacgccgccc atgccggatg gcaaggtcgg tatcagaatt gtgaaatttg
      481 gttttgtgcg ccatctgttt tctctgctgg cgcagcaggt gtcaggtgtt caggctgacg
      541 tgcgaattgt aaaccagaat gccagaaaaa aacaaaaccc gccgaaccgg gttaagtgcg
      601 ggtgcgttga ggatgcctga cacatcagag gtggcgaggg atttctcccc cgccaggtct
      661 cttactcctc aggttcgtaa gctgtgaaga cagcgacctc cgtctggccg gttcggattc
      721 gtacctcgca gaggtctttc ctcgttacca gtgccgtcac tatgacggtt aaacagatga
      781 cgatcagggc gattaacatc gccttttgct gcttcatagc ctgcttcccc ttgcctttcg
      841 gcacgtaaga ggctaaccta catttgtgag acatagattg ggcctcagat taatgttaag
      901 cgtcttgcag gacgcgaaat gttaactggg gcttttctct atctgccttt cagtgttcat
      961 gcctgagaca gatagcctca agcacccgca gccattctac ttaactcacg tcacctcgcc
     1021 aatatgaaat caatcagaaa ggtgatccat aaaatcactc cttctcttct tttccgtagt
     1081 ggagttggcc aattttgata agagggcgtc cctgagattt gcggtgtaga ttggtatcgc
     1141 gcagagaata cacacagcca caatattcct gctgatagaa tttttcgcgc ttgctgattt
     1201 caatcatacg ggacgagccg ccctgcttgc gccagttata atcccagtac accatacccg
     1261 gataatgcgc aacagctcgc cgcccaca
//
LOCUS       DADKRT010000347         1282 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.352, whole genome shotgun sequence.
ACCESSION   DADKRT010000347 DADKRT010000000
VERSION     DADKRT010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.352"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..853
                     /locus_tag="JQ356_004303"
     CDS             <1..853
                     /locus_tag="JQ356_004303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS66-like element ISSfl3 family transposase"
                     /protein_id="HAY4624169.1"
                     /translation="PLYIALNDYVLEAGKVHADDTPVKVLAPGNGKTKTGRLWVYVRD
                     DRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADAYAGYNVLYETGRVKEAGC
                     LAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQ
                     SLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAV
                     GRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLP
                     WNFSSVK"
     gene            853..1282
                     /locus_tag="JQ356_004304"
                     /pseudo
     CDS             853..1282
                     /locus_tag="JQ356_004304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558264.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          329 a          310 c          373 g          270 t
ORIGIN      
        1 tcctctgtat atagcgctga atgactatgt tctggaggca ggaaaggtgc acgcagatga
       61 cactccggtg aaagtactgg ccccggggaa cggaaagacg aaaacgggtc gtctgtgggt
      121 atacgtcagg gatgatcgta atgcgggttc atccctgccg gcagccgtct ggttcgcgta
      181 ttcggcagat cgcaaaggag aacatccgca gctccacctg gcaaagtatc agggcgtact
      241 gcaggctgat gcctatgcag gttataacgt actgtacgaa acgggccggg tgaaggaagc
      301 cgggtgcctg gcccacgccc gccgaaaaat ccatgacgag gatgtgcgcc gtccgacaga
      361 aatgactcag gaagcgctca gacggatagc agagttatac gacatagaag cggagatacg
      421 tggcagtccg gcagaggaac ggcttgcagt cagaaaagcc agaagcgtcc agttgatgca
      481 gtcattgtac gactggatac agttgcagag gaaaacgctg tcgaaacatg cggagatggc
      541 gaaggcgttc gactatatcc tgaatcactg gaatgcgctg aacgagttct gtcgtgacgg
      601 ctgggtggaa atagacaaca acatcggtga aaacgcgtta cgatcggtgg cggttggaag
      661 aaaaaattat ctctttttcg gctcagacaa gggaggagaa agtgcggcga tcatctacag
      721 tctgctggtc acctgcaaac agaacgaagt ggagccggag gactggttgc gcgaagtgat
      781 cgagaagctc aatgactggc cgtcgaacca agtgcatgaa ctgctgccct ggaacttctc
      841 gtctgtaaaa taatccttac gctacgtact tctcggggcg cttacaccgt tactgttcat
      901 tgtccgcgct gtcattccga tgaagtttat cgacatggcc gtagttgttc ccggcatgag
      961 cgtttccgtt gtcgctcatg taaacgtgtt ttccagctca cttactctta tgaagccaga
     1021 aaacccggcg ttaaggagca gatcgttgaa atggcacata acggcgcagg gggccgtgat
     1081 accgccagga cactgaaaat cggcatcaat accgtcatac ggacattaaa aagctcccgc
     1141 cccggcggat aacatctgcg ccagtcgctc acgctgatgt tgcccttatc tgtgaacttg
     1201 atgagcagtg gcgcttcgtc ggcagcaagg ctgcaacaac actggctctg gtatgcgtac
     1261 aacactaaaa ctggcggtgt gt
//
LOCUS       DADKRT010000348         1274 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.353, whole genome shotgun sequence.
ACCESSION   DADKRT010000348 DADKRT010000000
VERSION     DADKRT010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.353"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(57..896)
                     /locus_tag="JQ356_004305"
     CDS             complement(57..896)
                     /locus_tag="JQ356_004305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY4624170.1"
                     /translation="MLNVAIENQNGWNYSAPAPHKTGAGISTPKVTRAHNRAEAVFLC
                     VMHSHIQIMVRRAGQPQGWPGSRVTGSANPVRLTTHEISTSAGELINLSLEDVIMATT
                     LSHPDVTIENGRAVTTSISIAEFFGKQHHHVVQKIESFECSELFLTSNFSRVKFEHRG
                     NSYNAYQITKNGFVFLVMGFTGKKAATFKEAYIAEFDRMEAELRQNNTPPADKMIPGD
                     GRTLVVHFDKFGNVEFTETVPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQLL
                     SLK"
BASE COUNT          330 a          313 c          296 g          335 t
ORIGIN      
        1 tgagggcagg tgtaaaacaa taatcaagca tggggttcat atccatagct ccatttttat
       61 tttaaggaaa gcaactgctc tacggtcatg tttttaattg cgccccggtt tacaagagtc
      121 cagccctgtt tttccagata aaaccggaaa gtctccaggg tacagaccag tgcgccatca
      181 ggaacggttt cggtgaattc gacattgccg aatttgtcga agtgaacaac cagagtgcga
      241 ccatcacccg gaatcatctt gtcagcaggt ggggtgttat tctggcgcag ttcggcctcc
      301 atgcggtcga actcagcaat gtaggcttcc ttgaatgtgg cggctttttt gcccgtgaag
      361 cccatcacca ggaaaacgaa gccgtttttg gtgatttggt aggcgttata agaattgccg
      421 cggtgttcga atttaacccg cgaaaagttg ctggttaaaa atagttcaga acattcgaag
      481 gattctattt tttgaacaac atggtgatgc tgcttgccaa aaaactcagc aatcgaaata
      541 gaagtagtga cggcgcgacc attttcgatg gttacgtcag ggtgagaaag ggtagtagcc
      601 ataatgacat cctcaagtga taagttaatt aactcaccag cagaggtgct aatctcatgg
      661 gtggtgagac gcacagggtt agcactaccg gtcactcgag aacccggcca gccttgcggc
      721 tgccccgcac gcctcaccat aatttgaatg tggctgtgca ttacgcataa aaaaaccgct
      781 tcagcgcggt tatgcgctcg agtaactttc ggggtgctaa tcccggcacc cgttttatga
      841 ggtgcaggtg cactataatt ccacccgttc tggttttcaa tagctacatt caacattttc
      901 tctttccttt catcaccgaa gtgaattttg tgatgcggtg cctagtgcct ccaggtgacg
      961 ttaaccagtt aacaattaca gtcggctttc ccacccaaac caataaggac taacatgact
     1021 tttaactgtg ccgcgtgcgc ttagccgcat tcaccgcatc acaaaattca ctttaaaaag
     1081 ggcggacatc agccagcaat taaaccgatg ccgccaactg gtacttcaca cagcaatgtc
     1141 gttatttaca accggaagcg cactcccacc atttaaattt cacagacaag accgactctt
     1201 tatgaatacc ggaaatgcgc cttcgtgttg tgcccggttt tatttcacca cctccgggct
     1261 ttggtggcct cggc
//
LOCUS       DADKRT010000349         1244 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.354, whole genome shotgun sequence.
ACCESSION   DADKRT010000349 DADKRT010000000
VERSION     DADKRT010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.354"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            220..1167
                     /locus_tag="JQ356_004306"
     CDS             220..1167
                     /locus_tag="JQ356_004306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001361319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HAY4624171.1"
                     /translation="MKNVLVTVPSFSARCVSASKLLRENNFNLIIKNNVEHLLKSEST
                     ALRESICAVIAGKDCYQADTLSLLPGVKIISRFGTGIDNIDLRAAQQSGIVVNNAVGI
                     NSNAVAEFIIGLIFASMRNIPGSYHAMQNGYWGESHGYELQGKRIGMVGYGNIGKTLA
                     KRLSGFDVELLAYDKQPDYQVADKVGVQFVSIEDIFMQSHVIIVLLPFSPELENFISH
                     KYLSMMRNGALIINAARGKLLDEGALLQVIEERNVFAALDVFSSEPLAQFSPLLHAKN
                     IITTPHIAAATVESYQQTGTHVAQSIIDYFAGREIKNVL"
BASE COUNT          341 a          241 c          297 g          365 t
ORIGIN      
        1 aggtttagca ccgtcatgct cgtctactgt tgttctggtt gttggtgatg cggtggcgct
       61 tgcactctct gaattgaaaa aatttactcg tgctgatttc ggcttatatc atccaggagg
      121 tgcactcggc attaaagcaa attcataatt tcaaagtata aatacagtga ccggtcacgc
      181 catcttttgg ggtggcgttc attgaagtga gtgtcagcta tgaaaaatgt tctggtcacc
      241 gtccccagct tttcagcacg ctgtgtttcc gccagcaagt tgctaagaga gaataatttt
      301 aatcttatta ttaagaataa tgtggagcat ctgcttaaat cagaatccac tgcattacga
      361 gaatctattt gcgcggtcat cgccggaaaa gattgttatc aggcggacac gctatcattg
      421 ctgcctggtg tgaaaataat atcgagattc gggacgggga tagataatat tgatcttcgt
      481 gcagcacaac aatccggtat tgtagtcaat aatgcggttg ggattaattc aaatgctgtc
      541 gcggaattta tcattggact tatcttcgcg agcatgagaa atattcccgg cagctatcat
      601 gcgatgcaaa atggctactg gggtgagtcg catggctatg aattacaagg caaacggatt
      661 ggcatggttg gctacggcaa tataggtaaa accctggcaa aaaggttatc cggttttgat
      721 gttgagcttt tagcttatga caaacaaccc gattatcagg ttgctgacaa agttggagtt
      781 cagtttgtat caattgaaga tatctttatg cagtcgcatg tcatcattgt tcttttgcct
      841 ttttctcctg agctggagaa cttcattagt cataaatatt tgtcgatgat gcgcaatggt
      901 gctctaatca tcaatgccgc aaggggaaag ttgctggatg agggcgcttt actacaggtg
      961 attgaagaac gaaatgtgtt tgcggcgctg gatgtgttta gctctgaacc gttggcgcaa
     1021 tttagcccac tgctacatgc caaaaatatc attacaacgc cgcatattgc ggccgccacc
     1081 gttgagtcat accagcaaac cggtacacac gttgcccagt cgataattga ttacttcgca
     1141 ggaagggaga taaaaaacgt gttgtgagtt cagcgaacga agtttttaaa tacaaaaaaa
     1201 ccgcaatttg tggaacacat tgcggtttat cagcattcta agta
//
LOCUS       DADKRT010000350         1233 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.355, whole genome shotgun sequence.
ACCESSION   DADKRT010000350 DADKRT010000000
VERSION     DADKRT010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.355"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(279..566)
                     /locus_tag="JQ356_004307"
     CDS             complement(279..566)
                     /locus_tag="JQ356_004307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624172.1"
                     /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKADKKTIESQKSVDDEDIIRLVAER"
     gene            complement(641..784)
                     /gene="mgrB"
                     /locus_tag="JQ356_004308"
     CDS             complement(641..784)
                     /gene="mgrB"
                     /locus_tag="JQ356_004308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HAY4624173.1"
                     /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
                     IPW"
     gene            943..1182
                     /locus_tag="JQ356_004309"
     CDS             943..1182
                     /locus_tag="JQ356_004309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624174.1"
                     /translation="MRFIIRTVMLIALEWIGLLLSGYGVLIGSKENAAGLGLQCTYLT
                     ARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG"
BASE COUNT          405 a          258 c          240 g          330 t
ORIGIN      
        1 taaaataaga aaaattgatg aatgagcaaa aaaatcaaga gagaaacgtt tcgctaataa
       61 ataataccac gcttaatcac aaatccgatg taaacatcct aataaattaa tgaggaaaat
      121 atctttttct gatatcccgt tacgcaaata aataatatga taattatttg aagtcagacc
      181 agagttttaa tttgaagcag ttgcaccatg acagtgcgta taatcaggat gaattgagta
      241 acccttcaac gacggggtta ctcaagattg aggaaggatt atcgttcggc gaccaggcga
      301 ataatatctt cgtcatcaac cgatttttga ctctcaatgg tctttttatc tgctttctct
      361 ggttcgtttg cttcgcacaa acgacgtaac agtgcatttt gacgtttttg ctgatccagc
      421 aacgcctcaa gcagttcaat ctgttcgtta gtccgtgaac tggcacgatt gataaaaaac
      481 cacaagatga gcccgataag aagaactacc accgatacaa ccaaagacgc aatgttcatc
      541 acgcctgaat ttacaacttc gttcatttca ccacctctga gtagaggcgc tattctacca
      601 ctgctggaga ggaagaaaat ctagtgctga aaaaatgata tcaccacggg ataaactggt
      661 taatggcaca aattccgctg aaaaattgta catcctgatc gcacatcatg ttgaatacct
      721 gcgcccaaag cagcaagcaa gccaacacca cgacaaccag aacgacccat cgaaactttt
      781 tcactccaat ctccgcttca cctaccttat gtcattaaac tagcatgcgt tagttaaaca
      841 gcgcctaact atgtcgatat tcgtgctttt tcggaatgag tagcttgctt cagcgcatat
      901 tgccgctacg attaagcgaa cataaaaaga gaagaggttg taatgcgatt catcattcgc
      961 acagttatgc tgatagcact ggaatggata ggattattac tcagcggata tggcgttttg
     1021 attggaagca aagagaatgc cgcaggatta ggtttgcaat gtacctatct gactgccaga
     1081 ggcaccagca cggtacaata cttgcacact aaaagtggtt tcttggggat aacagattgc
     1141 ccactgttac gtaaaagcaa tatcgtggtc gataatggtt aagggtaata aataaccaga
     1201 ttctcactca tgagtaaaat attcttatag caa
//
LOCUS       DADKRT010000351         1226 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.356, whole genome shotgun sequence.
ACCESSION   DADKRT010000351 DADKRT010000000
VERSION     DADKRT010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.356"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..695)
                     /locus_tag="JQ356_004310"
     CDS             complement(<1..695)
                     /locus_tag="JQ356_004310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY4624175.1"
                     /translation="MLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGE
                     NRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALK
                     ELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMS
                     LELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQL
                     SPRIMQTLLQQTA"
     gene            complement(1011..>1226)
                     /locus_tag="JQ356_004311"
     CDS             complement(1011..>1226)
                     /locus_tag="JQ356_004311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HAY4624176.1"
                     /translation="DGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLT
                     HILSEHFENVKTKVQGTVVMFSASGKK"
BASE COUNT          355 a          211 c          258 g          402 t
ORIGIN      
        1 tgggcggttt gttgtaacaa agtttgcatt attctgggag atagttgatt ttctctaaga
       61 ttgacaacgc tatcagaact gaggccaagt atgctttccg gaattgccgt gatccggttc
      121 tgattaagcc agaatattct tataatatga tcatctcttt ctggaaaatc tggtattact
      181 tccaaagcat ttctggctgc atcaagtaat tccaatgaca ttggtaacct cggaagtaca
      241 gacaggtgat tgtcacttac gttaatatat tctagtgacg caggtaattc aggaagtgcg
      301 aacaaatggt tatcactcac atttatatat tccagcgaca ctggtaattc aggaagtgca
      361 gataattgat tactgcttgc attcagttct ttcaatgccc ttggtagctc ggggagcatt
      421 gatagttggt tattgcttac attaatttca tcaagattgt caggcaatcg tggtagagat
      481 ctgagaccta aacaagataa gtccaacgat gtttcactgt tctccagaca taattggagc
      541 cgggtaaaag cagtttccct gttttctccg gaaatgctgt ttttagtcca ttcaacccat
      601 tcggagagat aattattgtg aacattgtcg attgatgtag ttctgtaaaa agagacgttt
      661 ccagtggata gggggggatt atttacagga agcataataa cctcgcagaa ggatatcctg
      721 ataaaatgtg atactgggaa ataataagct aaaataaaat gtttcaggat tgaaatttat
      781 tgttttcatt ttaaggaagt gatgttgatt taactgtaaa aaaacgatac tattttctta
      841 gatggtaaat gtctcgcctg tgctatattt tgtttttcgg ttagttaaat atcgtacgtt
      901 catatttgaa tgttctgccg gaatgcatta tcaatagagg taaagtcgca accccaaatc
      961 gtaaaggaaa ccgtagcacg tcttaagcaa gaacgtgctg cggttggatg ctattttttc
     1021 cctgaagcag aaaacattac tacagtacct tgaaccttgg ttttaacatt ctcgaaatgc
     1081 tctgagagta tatgtgttaa gccttcttcg gaatcttttg tgtttgaaaa gatgcctttc
     1141 tgattgtaaa tgcgcatcag tttttgaccg aagctattgt gcacaactcc atcgccaaga
     1201 attgtggctc cgtatagagt tccatc
//
LOCUS       DADKRT010000352         1199 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.357, whole genome shotgun sequence.
ACCESSION   DADKRT010000352 DADKRT010000000
VERSION     DADKRT010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.357"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JQ356_004312"
     CDS             complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JQ356_004312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH4.5"
                     /protein_id="HAY4624177.1"
                     /translation="MKPINNHSFFRSLCGLSCISRLSVEEQCTRDYHRIWDDWAREGT
                     TTENRIQAVRLLKICLDTREPVLNLSLLKLRSLPPLPLHIRELNISNNELISLPENSP
                     LLTELHVNGNNLNILPTLPSQLIKLNISFNRNLSCLPSLPPYLQSLSARFNSLETLPE
                     LPSTLTILRIEGNRLTVLPELPHRLQELFVSGNRLQELPEFPQRLKYLKVGENQLRRL
                     SRLPQELLTLDVSNNLLTSLPENIITLPICTNV"
BASE COUNT          341 a          215 c          259 g          384 t
ORIGIN      
        1 ttaacattcg tacaaatggg caatgtgatt atattttcgg gtaatgaagt tagtaggtta
       61 ttggaaacat ccagtgtcaa tagttcttgc ggtaatctgg ataatctgcg tagttgattt
      121 tcacctacct tcaaatattt taagcgctga ggaaattctg gtagttcctg tagcctgttg
      181 ccggaaacaa agagttcttg tagtctatga ggcaattcag gcaagacagt aaggcgatta
      241 ccttcaatac gtaatattgt tagcgttgat ggaagctctg gtaacgtctc cagactatta
      301 aaacgtgccg agagtgattg taaatatggt ggtaatgatg gcagacatga caaatttcga
      361 ttgaatgaaa tattaagctt aatcagttga gatggaagtg tcgggagtat attcaagttg
      421 ttaccattta catgaagttc tgtcaaaagc ggagaatttt caggtaggga gattaactca
      481 ttgttggaaa tattaagttc acgtatatgc aaagggagtg gtggtaaaga acgtagtttc
      541 agtaagctta aattgagaac aggctcccgg gtatccagac atattttcaa taatcgaacc
      601 gcctggatgc gattttctgt tgttgttcct tccctagccc agtcatccca gatgcggtgg
      661 taatctctgg tacactgttc ttctaccgat aaacgagata tacatgataa gccacaaagg
      721 gaacgaaaaa aagaatgatt gttgatcggt ttcatttatt aacccctcac tattcatatc
      781 ttggtctatt aatgcaaata aaacgagaaa gtctttaaaa aaacaatcct agagctttat
      841 cggcgttttc attccagctg gaggaatatg ttcctgtctt tccagtaacc gtcgattgtt
      901 atatcagtct acccatgtta atgtgaccag ttctactttc atccagtttg gattgatctt
      961 tatcccctat attttcaaac aatttttatc atttaactca ttactgtctc gatattccca
     1021 tagcaaacga tctggttggt tagcccctca aaaaagtcag ttgcacgccg taaatccctg
     1081 ccggtattga gcgaggattt acgggttgtt gttaaggtcc gtaatcgggt cacagttttt
     1141 ccggagtcaa tccggtctgc ggtttatgct tatgcgacgt gattatgaat ggtgcagtc
//
LOCUS       DADKRT010000353         1193 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.358, whole genome shotgun sequence.
ACCESSION   DADKRT010000353 DADKRT010000000
VERSION     DADKRT010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.358"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..77)
                     /locus_tag="JQ356_004313"
     CDS             complement(<1..77)
                     /locus_tag="JQ356_004313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY4624178.1"
                     /translation="MSKVGINGFGRIGRLVLRRLLEVKS"
     gene            266..796
                     /gene="cybB"
                     /locus_tag="JQ356_004314"
     CDS             266..796
                     /gene="cybB"
                     /locus_tag="JQ356_004314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415935.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
                     /protein_id="HAY4624179.1"
                     /translation="MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMI
                     HVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGL
                     VMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHY
                     FWKDNTLLRMMPRKRS"
     gene            1041..>1193
                     /locus_tag="JQ356_004315"
     CDS             1041..>1193
                     /locus_tag="JQ356_004315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624180.1"
                     /translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN
                     DGSISAS"
BASE COUNT          320 a          258 c          269 g          346 t
ORIGIN      
        1 ttgcttttga cttcaagtaa tcgacgcaac accagtcgac cgatacgacc aaaaccgtta
       61 ataccaacct tactcatggt tttctcctgt caggaacgtt cggatgaaaa ttgatccttt
      121 ccaagcttag cccaggattg tgggatgggc aatctccatt cttacagtga aacgtaacgt
      181 actgaaaacg ggtgaacaat atttaatgaa attttgagaa aagcccgtta tgttaacgga
      241 aaattatgtt aaagcaggaa atgttatgga aaataaatac tcaaggttac aaatcagcat
      301 tcactggctg gtctttttgc tggttatcgc agcgtattgc gcaatggagt ttcggggttt
      361 cttcccacgt agcgatcggc cactcatcaa catgattcat gtttcctgcg gcatctcaat
      421 tctcgtgctg atggtcgttc gtcttttgtt aaggctgaaa tacccaaccc cgccgattat
      481 acctaagcca aaaccgatga tgacgggact ggcgcatttg ggacatttgg tgatttatct
      541 cctgtttatt gcgctgccag tgattggttt ggtgatgatg tataaccggg gcaacccgtg
      601 gtttgcgttt ggtttgacga tgccttacgc ttcagaggcc aatttcgaac gggttgatag
      661 cttaaagtcg tggcatgaaa cgctggcgaa tctgggatat tttgtcatcg ggttgcacgc
      721 tgcggctgca ctggcacacc actatttctg gaaggacaac acacttctac gcatgatgcc
      781 gcgtaaacgt tcctgaagga tatttaaaga aaacgcctgt actaaaaccg acccgtggta
      841 caggcgaaga atacgggtct acatcggaag cgcctattat atttatttgt atgacaaata
      901 aaaccataat ccttgcccat acgtccatct ggcttatttt taatcaattc acccgatctt
      961 tgatctcatc aacggtatca aaataaacca gcgtataacg ttcaaatcga acataagatt
     1021 cgataaacca tggaggttat atgaaaaaac tggcacttat tttgtttatg ggaacgcttg
     1081 tttcctttta tgccgatgcc gggcgcaaac cctgttctgg ttcgaaaggg gggatctcac
     1141 actgtacggc aggcggcaaa tttgtctgta atgatggttc tattagtgcc tcg
//
LOCUS       DADKRT010000354         1184 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.359, whole genome shotgun sequence.
ACCESSION   DADKRT010000354 DADKRT010000000
VERSION     DADKRT010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.359"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            60..884
                     /gene="rhaD"
                     /locus_tag="JQ356_004316"
     CDS             60..884
                     /gene="rhaD"
                     /locus_tag="JQ356_004316"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HAY4624181.1"
                     /translation="MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAP
                     YKDNVHAQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGY
                     HILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAV
                     FTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSG
                     STLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL"
     gene            894..>1184
                     /gene="rhaM"
                     /locus_tag="JQ356_004317"
     CDS             894..>1184
                     /gene="rhaM"
                     /locus_tag="JQ356_004317"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HAY4624182.1"
                     /translation="MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIY
                     LDKARNLLFATVEIESEERWNAVASADVCQRWWKYMTDVMPANPDNSPVSSEL"
BASE COUNT          295 a          336 c          312 g          241 t
ORIGIN      
        1 gccttatccg gcctacgggt cgtgcatctg acaacaccga atttacagga acacagaaca
       61 tgcaaaacat tacccagtcc tggtttgtcc agggaatgat caaagccacc accgatgcct
      121 ggctgaaagg ctgggacgaa cgcaacggcg gcaacctgac gctgcgcctg gatgacgccg
      181 atatcgcgcc ttataaagac aacgtccatg cacaaccgcg ctatatcccg ctcagccagc
      241 ccatgccttt actggcaaat acaccgttta ttgtcaccgg ctccggcaaa ttcttccgta
      301 acgtccagct cgatcctgca gctaacttag gcgtcgtaaa agtcgacagc gatggcgcgg
      361 gctaccatat tctctggggg ttaaccaacg aagccgtccc gacatccgaa ctcccggcgc
      421 actttctctc ccactgcgag cgcattaaag ccaccaacgg taaagatcgg gtgatcatgc
      481 actgccacgc caccaacctg atcgccctca cctatgtact ggaaaacgac accgcggtct
      541 ttactcgcca actgtgggaa ggcagcaccg agtgtctggt ggtattcccg gatggcgttg
      601 gcattctgcc gtggatggtg cccggcacgg acgaaatcgg ccaggcgacc gcacaagaga
      661 tgcaaaaaca ttcgctggtg ttgtggccct tccacggcgt cttcggcagc gggtcgacgt
      721 tggatgaaac attcggttta atcgacaccg cagaaaaatc agcacaagta ttagtgaagg
      781 tttattcgat gggcggcatg aaacagacca tcagccgtga agagttgata gcgctcggca
      841 agcgctttgg cgttacacca ctagccagtg cgctggcgct gtaaggagca aacatgatcc
      901 gcaaagcctt tgtcatgcag gttaaccccg acgcccacga agagtatcag cgtcggcata
      961 accccatctg gccggaactg gaagcagtgt tgaaatctca cggtgcgcat aactacgcca
     1021 tttacctcga caaagcgcgt aatctgctgt ttgccacggt agagattgaa tctgaagaac
     1081 ggtggaatgc ggtagccagt gctgatgttt gccaacgttg gtggaaatat atgaccgatg
     1141 ttatgcccgc taacccggat aacagcccgg tgagtagcga gctg
//
LOCUS       DADKRT010000355         1166 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.360, whole genome shotgun sequence.
ACCESSION   DADKRT010000355 DADKRT010000000
VERSION     DADKRT010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.360"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..313)
                     /locus_tag="JQ356_004318"
     CDS             complement(<1..313)
                     /locus_tag="JQ356_004318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624183.1"
                     /translation="MADKAILWALISASTKEERKACSLSYFACKAAEAELGLAYMAAN
                     DNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNK
                     IK"
     gene            complement(681..800)
                     /locus_tag="JQ356_004319"
     CDS             complement(681..800)
                     /locus_tag="JQ356_004319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY4624184.1"
                     /translation="MLSCVSDIPCDDNFYDVLSIPVASGNNMQCKNNPRCTHL"
     gene            complement(1021..>1166)
                     /locus_tag="JQ356_004320"
     CDS             complement(1021..>1166)
                     /locus_tag="JQ356_004320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY4624185.1"
                     /translation="LSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNK
                     ENP"
BASE COUNT          338 a          240 c          197 g          391 t
ORIGIN      
        1 cttttatttt atttactgtt tcaatgcaat cagcggcaag ttggagtgga tttagatttt
       61 tcagatatgg tcttatgatc tttcccttac ttaataaata gcatgtatag gattcggaaa
      121 gtccagcatc tattttgtac ctcattatat tagataagga tgtgagaaat tccttgttat
      181 cattcgcagc catatatgcc agtccgagtt cagcctctgc ggccttacag gcaaaatagc
      241 ttagtgaaca cgcttttcgt tcctctttag tactggctga tattagtgcc cataatattg
      301 ctttgtctgc caaatctaac tctctctgaa attgtcttgc agtaactgca ctcgcagaaa
      361 tagagaaaaa aatacaattg ttaataacct tgccatattt ttttagtccg taactgttaa
      421 tgtgctatct ggctctgaaa atattaactc atttaatttt tgcatgtcat tagataaacc
      481 agttatacaa ccctcggaac agaatcgagg tcctaaagac ggaccaaaag cgtttaaaca
      541 actatgtatt gaaaatccat tgcgattata agttcctgta ttaactgacg gtactaatcg
      601 tatgccgtca ggttttctat tgcttgctcc cgggtcatta acattccaac tccataggcc
      661 ttgaggtatt ggccatctat ttataaatgt gtacaacggg gattattttt acattgcata
      721 ttattaccag aagcgactgg aatactaagc acatcataaa aattatcatc acatggtata
      781 tctgaaacac acgaaagcat acctaaagtt atgctgtata aacaggtggc taatcccaag
      841 gggatcgatt ccagaaatcg ggttcaacgg atactgataa aaattccacc taccttccag
      901 cccaatcgga gcctgagtgt tataccgccc ctgctgcggt taatgttacc gataatagtt
      961 atagtacagc cctgattcat catcatacta ctgctgcggc agtctgatga actattgctt
     1021 ttacggattc tccttattct tccttctatc cattcgcttt agctttttga gctcttgaag
     1081 tttgctcttt gcatcaatat taccgttatt tacagcgaat tccatccaat aaatagctct
     1141 attcaaatta taatattctg ataatg
//
LOCUS       DADKRT010000356         1150 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.361, whole genome shotgun sequence.
ACCESSION   DADKRT010000356 DADKRT010000000
VERSION     DADKRT010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.361"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..261)
                     /locus_tag="JQ356_004321"
                     /pseudo
     CDS             complement(1..261)
                     /locus_tag="JQ356_004321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(376..1014)
                     /locus_tag="JQ356_004322"
     CDS             complement(376..1014)
                     /locus_tag="JQ356_004322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624186.1"
                     /translation="MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSE
                     LAATLQKMINPSGGDGNCSGCALHACMAMLGYGVREAPVPNEISEYMTGFFHRHLEQI
                     DSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLD
                     VQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC"
BASE COUNT          336 a          282 c          175 g          357 t
ORIGIN      
        1 caagcgctgt aactctttta tttgttttat agcggcagcc agttctgagg caggaacgac
       61 atcctctccg gcagcaacag cagtgagact tccttccaga tattattttt tccacttaag
      121 caacaggctg ggctgaatac catgcaaacg cgccacatgg gacaccgtca tgccaggctc
      181 cattgtctgc tgaataatgg caattttttc ctgaggagtt ttacgtttac gaagctccag
      241 ccccagcaaa gttccagtca tctcaaaatt agaactagtg ttagacatat atccaagcct
      301 atctcttatt ttaagataca tccactgtct ggcgtttcaa ggggccggct caaatctatg
      361 tacaggctct cagcatcagc aaagcctctt actcttccaa ctactactgt tagcatagtg
      421 atcaaattcc tgatcagata catgaattac ctgaaccgaa ctattttcat ctacaaatgc
      481 atctggcgat ttttctacag gatcataaag attaaatccc tttcctgttt gaacatccaa
      541 aaacataatt ttttcaccat cgttaaatcc agctatccaa tgagtggcct gttcaataga
      601 aatcattact acacttcctt ttgaagtgtt ttgtaaaata ttttctgcaa tacgctcacg
      661 aaatttacta taagtttcat taggatgtga cactatgcct tcactatcaa tttgctctaa
      721 atgcctatga aaaaatccgg tcatatactc tgatatttca ttaggtacgg gagcctctct
      781 tactccatac cctaacatag ccatacaagc atgaagcgca caccctgaac agttaccatc
      841 cccaccagac ggatttatca ttttctgtaa agtcgctgcc aattcagaat ctttatccat
      901 atcaccaaga cttttagagt ttaaagattc cagcaatttt ttaacattta catttccctc
      961 ctctgtatgt gcctcatatc cagcagttcc ctgtaacgac accccattaa tcatattgta
     1021 tcctgacagt atatatactc actatatttt cttcataaca aatatccctc tgatatgaca
     1081 acaaaaaacg gagccggatt cctgtttttg tgaactgcag ctattcgagt ctaaaaagtg
     1141 atccacttac
//
LOCUS       DADKRT010000357         1149 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.362, whole genome shotgun sequence.
ACCESSION   DADKRT010000357 DADKRT010000000
VERSION     DADKRT010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.362"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..316)
                     /locus_tag="JQ356_004323"
     CDS             complement(<1..316)
                     /locus_tag="JQ356_004323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY4624187.1"
                     /translation="MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEK
                     LMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSD
                     TNP"
     gene            complement(328..1125)
                     /locus_tag="JQ356_004324"
     CDS             complement(328..1125)
                     /locus_tag="JQ356_004324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001582091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY4624188.1"
                     /translation="MYHCDHRGLPLALISTEGATAWCAEYDEWSNLLSDENPHHLQQL
                     IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVINVDPQG
                     LVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDG
                     NYKDGMTVWLFSCNTSKGQNSFASQLAKELHTNVIGPDTLWTWWGRGTNGKLKMDTVL
                     TAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDIR"
BASE COUNT          305 a          262 c          219 g          363 t
ORIGIN      
        1 ttggatttgt atctgataaa aagaccccat aattaaactg cgctgtaaca ttcccctgag
       61 atgctgatct ttccaagaat cgcaattgtt tatcaatatt atttttagta aagcagtaat
      121 attgatatag tcgaaatgat gcctctgaat caccatgttg tgatttatac ttcagtttca
      181 tcagcttttc ttcacttaaa tcataggtca ttgctgtaga tcccatcaca ctttcgtttt
      241 cttttatttt cacatcagca ccatgcaatt gatcaataag agaaaaataa aaaaatagta
      301 acaagcatgc tttcatacat ctacaaccta tcttatatca ctgggttttt ctggcgtacc
      361 ttgcatatta gaaatggggt gcccagatgg cccatatgtt atccaattac caaggtcttt
      421 tgttgttata gccattagat ccttatttga attaaggttc gttggtgctg ttagcactgt
      481 atccattttt aacttaccat tagttcctcg cccccaccac gtccatagcg tgtcaggtcc
      541 tattacattt gtatgtaact ctttagctaa ttggctagca aatgaatttt gtcctttact
      601 tgtattacaa gaaaataacc aaactgtcat cccatcttta taattcccat caaatttaat
      661 tagatatgct agatctttag ctgtcatgat actgcgcgtt gcggattcaa tagatgtggg
      721 ggtaccatgc cccccgattg tgaaaacgcc tgggatatta atctcatcag ctacagaatg
      781 gataagatca ctttcggggt ataaatttat atcaaccaaa ccttgcggat ctacatttat
      841 gaccggattc aacggatact gataaaaatt ccatcccccc ttcagcccaa tcggatcctg
      901 agtgatatac cgcccctgca gcgggtcata atagcggtgg cggttgtaat acaggccgga
      961 ctcctcatca tactgctgac ccggcaggcg aatgagctgc tgcagatgat gcgggttctc
     1021 atcactcagc aggttgctcc attcatcata ttctgcgcac cacgctgttg ccccttccgt
     1081 gctgatgagc gccagcggca ggccgcgatg gtcgcagtgg tacaggtgga tttttcgcgc
     1141 cggcgtgta
//
LOCUS       DADKRT010000358         1148 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.363, whole genome shotgun sequence.
ACCESSION   DADKRT010000358 DADKRT010000000
VERSION     DADKRT010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.363"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            13..171
                     /locus_tag="JQ356_004325"
     CDS             13..171
                     /locus_tag="JQ356_004325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624189.1"
                     /translation="MYLSRISEAISLSAGEVAHRLIVPSSDIDLGETELPVLGEITWQ
                     AYDPARSK"
     gene            171..761
                     /locus_tag="JQ356_004326"
     CDS             171..761
                     /locus_tag="JQ356_004326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HAY4624190.1"
                     /translation="MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRAD
                     ELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFF
                     LDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
                     IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD"
     gene            748..>1148
                     /locus_tag="JQ356_004327"
     CDS             748..>1148
                     /locus_tag="JQ356_004327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000554725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4624191.1"
                     /translation="MHRIDTLTAVKDKFGPGKNGFTDGNLRTGRFATWLNSAMWNAIQ
                     EEICGVIEKAGIELNKEEHDQLYKAILLLVGGAINEEALLIKNNLSDVEDRDEAVENL
                     GLKPTVDKAKNAVQRDGDTMTGELKIRGVNAL"
BASE COUNT          291 a          249 c          339 g          269 t
ORIGIN      
        1 ccagaggggc gtatgtatct gtccagaatc agtgaggcca tcagtttgtc tgctggtgaa
       61 gtggcccacc ggttaatcgt cccttcatcg gatattgacc tgggggagac cgagcttccg
      121 gtgctcggcg agatcacctg gcaggcttat gacccggcaa ggagtaaata atggattcgt
      181 tacaggatga ttatacaaag ctgctgtacg gactgatgca gccggggcct gcatggtcag
      241 ataccgacgg tgtacttgac ggtctggcac catcgcttgt gcgtgttcac cagcgggctg
      301 atgaactggt gattgaaatc gatcccggtc agtccacaga gctgattgaa cgttatgaag
      361 aattgtatgg tttacctgat tcctgttccc ctgtcggaac ccagacatta cgccagcgtc
      421 agcaacgtct tgaagcaaaa gccaatgtgg ctggtggcat aaatgagcag ttcttcctgg
      481 atcagcttga ggcgctggga tataccggcg taacgatcga acagttccag cacctggatg
      541 caagccccga tccggaatgg ggagatcgct ggcgttattt ctggcgtgtg acgttgccgg
      601 tggatgccgg tgctcagtgg cagacatgca cggacgcctg caacacaccg atccggacgt
      661 ggggggatac ggttgcggag tgcgtgatta ataaattatg tccgtcacac accgtcgttt
      721 tattttccta tccagatgag gatgaagatg cacaggattg atacgctgac tgcggtaaaa
      781 gataagtttg gtccgggtaa gaacggattt actgacggaa atcttcgcac aggacgtttt
      841 gctacctggc tgaacagtgc catgtggaat gccattcagg aggaaatctg tggtgtcatt
      901 gagaaggccg ggatagaact gaataaagaa gaacacgacc agctatataa ggctatatta
      961 ttgctggtgg gcggtgcaat taacgaagag gcattgctga taaaaaataa cctttcggat
     1021 gtggaagaca gggatgaggc tgttgaaaac ctcggattaa aacccacggt ggataaggca
     1081 aaaaatgccg ttcagcgtga tggcgacacc atgaccggag agctgaaaat ccgtggtgtt
     1141 aatgcgct
//
LOCUS       DADKRT010000359         1131 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.364, whole genome shotgun sequence.
ACCESSION   DADKRT010000359 DADKRT010000000
VERSION     DADKRT010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.364"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            66..1074
                     /locus_tag="JQ356_004328"
                     /pseudo
     CDS             66..1074
                     /locus_tag="JQ356_004328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627495.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
     gene            1071..>1131
                     /locus_tag="JQ356_004329"
     CDS             1071..>1131
                     /locus_tag="JQ356_004329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624192.1"
                     /translation="MMMELQHQRLMALAGQLQLE"
BASE COUNT          273 a          307 c          296 g          255 t
ORIGIN      
        1 gatccacacc caacgcctga aatcagatcc agggggtaat ctgctctcct gattcaggag
       61 agcttatggt cacttttgag acagttatgg aaattaaaat cctgcacaag cagggaatga
      121 gtagccgggc gattgccaga gaactggggc tctcccgcaa taccgttaaa cgttatttgc
      181 aggcaaaatc tgagccgcca aaatatacgc cgcgacctgc tgttgcttca ctcctggatg
      241 aataccggga ttatattcgt caacgcatcg ccgatgctca tccttacaaa atcccggcaa
      301 cggtaatcgc tcgcgagatc agagaccagg gatatcgtgg cggaatgacc attctcaggg
      361 cattcattcg ttctctctcg gttcctcagg agcaggagcc tgccgttcgg ttcgaaactg
      421 aacccggacg acagatgcag gttgactggg gcactatgcg taatggtcgc tcaccgcttc
      481 acgtgttcgt tgctgttccc ggatacagcc gaatgttgta catcgaattc actgacaata
      541 tgcgttatga cacgctggag acctgccatc gtaatgcgtt ccgcttcttt ggtggtgtgc
      601 cgcgcgaagt gttgtatgac aatatgaaaa ctgtggttct gcaacgtgac gcatatcaga
      661 ccggtcagca ccggttccat ccttcgctgt ggcagttcgg caaggagatg ggcttctctc
      721 cccgactgtg tcgccccttc agggcacaga ctaaaggtaa ggtggaacgg atggaacagt
      781 ttttacatcc cactaatgac tcgcctgcgc ccgatgggga gcactgtcga tgttgaaaca
      841 gccaaccgcc acggtctgcg ctggctgcac gatgtcgcta accaacgaaa gcatgaaaca
      901 atccaggccc gtccctgtga tcgctggctc gaagagcagc agtccatgct ggcactgcct
      961 ccggagaaaa aagagtatga cgtgcatcct ggtgaaaatc tggtgagctt cgacaacccc
     1021 ccccagcatc atccactctc catctacgac tcattctgca gaggagtggc gtgatgatgg
     1081 aactgcaaca tcaacgactg atggcgctcg ccgggcagtt gcaactggaa a
//
LOCUS       DADKRT010000360         1101 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.365, whole genome shotgun sequence.
ACCESSION   DADKRT010000360 DADKRT010000000
VERSION     DADKRT010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.365"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..551
                     /gene="ospC4"
                     /locus_tag="JQ356_004330"
     CDS             <1..551
                     /gene="ospC4"
                     /locus_tag="JQ356_004330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type 3 secretion system effector OspC4"
                     /protein_id="HAY4624193.1"
                     /translation="EFCYNKNIDPVSLDRIINFVFQLEYHIPRMLSTDNFKKIKLRDI
                     SLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNKKADIALYLLSKFNFTKQDVAEME
                     KMNNNRYCNLYDVEYLLSKDGANYKVLEYFINNGLVDVNKKFQKANSGDTMLDNAMKS
                     KNPKMIDFLLKNGAILGKRFEI"
     gene            889..>1101
                     /locus_tag="JQ356_004331"
     CDS             889..>1101
                     /locus_tag="JQ356_004331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624194.1"
                     /translation="MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQW
                     VTAARKGLNTPGSRTVAELESEVMQLR"
BASE COUNT          372 a          197 c          230 g          302 t
ORIGIN      
        1 gagagttttg ttataacaaa aatattgatc ctgttagtct ggatagaatt ataaactttg
       61 tgtttcagct tgagtatcat ataccaagaa tgctaagtac agataacttc aaaaaaataa
      121 aactcagaga catatctttg gaggatgcga ttaaagcatc taattatgaa gagattaaca
      181 ataaagtgac tgataaaaaa atggctcatc aggcccttgc ttattcttta ggcaataaaa
      241 aagctgatat agcactttat ttactatcta aatttaattt tacaaaacaa gatgtcgcag
      301 agatggagaa aatgaacaac aatagatatt gtaatctgta tgatgttgaa tacttactta
      361 gtaaagatgg tgccaactat aaagtgctag aatattttat caataatgga ttggttgatg
      421 taaacaaaaa atttcaaaaa gcaaatagtg gggacactat gcttgacaat gcaatgaaaa
      481 gcaaaaatcc aaaaatgatt gattttttat taaaaaatgg agcaatatta ggcaaacgat
      541 ttgagatatg acctaaaagc tcggccaaat aataatgtcg tcgattatcg aagtcatcat
      601 gagtgattct gtccccacag tgcagcatca gcatgacagt gaattgtctg gcgtggtcca
      661 tttaatgaga tggagatggt ccctctttcc taaatagctg tgccgaatac cgctacactt
      721 ttgccagccc atgtttgcct ccggggaatg ggctgacggt tccttcaaaa tccattgcac
      781 gcagttatgt cggagcggga acttgactcc tgtctttacg ggagtgaggt agcctgagtt
      841 taacggacac tccttcctga aatagaatgg catcagaagg agccaataat gagcagaaaa
      901 acccaacgtt actctacgga gtttaaagcc gaagccgtca aaacggttcc tgaaaatcag
      961 ctttcgatca gtgaaggcgc ttcccgatta tctgttcctg aaggcacttt aggacaatgg
     1021 gttaccgctg caagaaaagg gctcaataca ccaggctccc gcacagtggc tgagctggaa
     1081 tctgaagtta tgcaactgcg t
//
LOCUS       DADKRT010000361         1093 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.366, whole genome shotgun sequence.
ACCESSION   DADKRT010000361 DADKRT010000000
VERSION     DADKRT010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.366"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..192)
                     /locus_tag="JQ356_004332"
     CDS             complement(<1..192)
                     /locus_tag="JQ356_004332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate transporter"
                     /protein_id="HAY4624195.1"
                     /translation="MLNGGGILFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGK"
     gene            378..1093
                     /locus_tag="JQ356_004333"
                     /pseudo
     CDS             378..1093
                     /locus_tag="JQ356_004333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          336 a          257 c          252 g          248 t
ORIGIN      
        1 ttttccgccc cgataaaaaa actccagttc atctgatgac agtgttttcc agttgttttc
       61 agccaaccat ttcatttgtt tccggaatgt ctcgggagaa agtgtaacca gtcctgggca
      121 atggctgaca tgatgataca ttaataccgg aacatgattt gctttaaaca aaatgccccc
      181 tccgtttaaa atttaaagtt tctggcaccc agtaagtaga gataaaagga aagcctaata
      241 aaggtggtga actttatata ctactaaatc aaacatcaac aatttataaa caataatata
      301 ttatcatatc ttttaaaaac ggctcactaa gaaccttgag gtggcacact aaatttagct
      361 acctgaacag aggtgatatg ctcacctcag aacaacacag gtgccataat gaaaaaagaa
      421 atttcagcgc agagtttaaa cgcgaatccg ctcaactggt cgttgaccag aaatacaccg
      481 tggcagatgc agccagcgct atggatgtcg gcctttccac aatgacgcga tgggtgaaac
      541 aattacgtga tgagcggcag ggaaaaacac caaaagcctc ccccattacc ccggaacaaa
      601 ttgaaatccg tgagctcagg aaaaagctac aacgtattga aatggaaaat gaaatattaa
      661 aaaggctacc gcgctcttga tgtcagactc cctgaacagt tttcgataat cgggaaactc
      721 agggcgcgtt atcctgtggc cactctctgc catgtgttcg gggtccatcg cagcagctac
      781 aaatactgga aaaaccgtcc tgaaaaacca gacggcagac gggctgtatt acgcagccag
      841 gtacttgaac tgcatggcat cagccacggc tctgccggag caagaagcat cgccacaatg
      901 gcaacccaga gaggctacca gatggggcgc tggcttgctg gcagactcat gaaagagctg
      961 gggctggtca gttgccagca gccgactcac cggtataagc gtggcggtca tgagcacgtt
     1021 gctatcccga atcatcttga gcgacagttc gccgtaacgg aaccaaatca ggtgtggtgc
     1081 ggtgatgtga cct
//
LOCUS       DADKRT010000362         1090 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.367, whole genome shotgun sequence.
ACCESSION   DADKRT010000362 DADKRT010000000
VERSION     DADKRT010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.367"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(12..323)
                     /locus_tag="JQ356_004334"
     CDS             complement(12..323)
                     /locus_tag="JQ356_004334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HAY4624196.1"
                     /translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
                     VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
                     Y"
     gene            486..582
                     /gene="ffs"
                     /locus_tag="JQ356_004335"
     ncRNA           486..582
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="JQ356_004335"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            702..1055
                     /locus_tag="JQ356_004336"
     CDS             702..1055
                     /locus_tag="JQ356_004336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HAY4624197.1"
                     /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
                     DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
                     GKRMIYGGFESIIDE"
BASE COUNT          246 a          274 c          315 g          255 t
ORIGIN      
        1 cccggagagg gttagtagtt ccagcgataa cgctgcaagt cgatttgccc gcttcccgat
       61 accatcacac cttctgccag taatgcctgt cgctgacgct gtaaatccgg tccggttagc
      121 gaaattgtgc cgtggcgatt aaccacccgg tgccagggta aggtgctgcc ttcagggaga
      181 cgctttaaca caccgcccac ctggcgcgcg gcgcggggcg atcccgccag tttcgccaca
      241 tcaccgtaag tggtgacata gccttcggga atagcggcga cgatttgcca gacgcgttgg
      301 ggaaatgaat cttctttttc catcttttct tcctgaggta atttttcagc ataatctgga
      361 aaaacgcccg agtgaagtcg cattgcgcaa gaaaccagca tctggcacgc gatgggttgc
      421 aattagccgg ggcagcagtg ataatgtgcc tgcgcgttgg ttctcaacgc tctcaatggg
      481 ggctctgttg gttctcccgc aacgctactc tgtttaccag gtcaggtccg gaaggaagca
      541 gccaaggcag atgacgcgtg tgccgggatg tagctggcag ggcccccacc catttctgcc
      601 taccaccgtt tcgtcaaaaa aacccaacat ggctaaactt taaccacaac tgacgtcgca
      661 agaattgtct ggctgcgcag tacgcttcgg aggtatgtct gatgaagtat gttgatggtt
      721 ttgtggttgc cgttcctgcc gataaaaagg atgcctatcg ggaaatggcc gctaaggctg
      781 cgccattgtt taaagagttt ggcgcgcttc gtattgtcga atgctgggcc agcgatgtac
      841 cggatggcaa agtgaccgat tttcgtatgg cggtgaaagc ggaagagaat gaagaggttg
      901 tctttagctg gattgaatac ccttcaaaag aggtccgcga cgctgctaat caaaagatga
      961 tgtcggaccc acggatgaaa gagttcggcg agtccatgcc gtttgacggc aagcgaatga
     1021 tctatggcgg attcgagtca atcatcgacg aataggtagc gtgacgggct gtgcggcgtg
     1081 ccgtcagccc
//
LOCUS       DADKRT010000363         1084 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.368, whole genome shotgun sequence.
ACCESSION   DADKRT010000363 DADKRT010000000
VERSION     DADKRT010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.368"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..447
                     /locus_tag="JQ356_004337"
     CDS             <1..447
                     /locus_tag="JQ356_004337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014837283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624198.1"
                     /translation="LPISAADKRRFYYYFQEKNTPNIERFFVFDSSEYRYALNMREVV
                     FHQFLSDGLRPIVDEDDYFNVHITLVNGGPVIPLSVEPDAPQNEETDDIGQLNAFFDA
                     LDCEPETTDRFMITDEDGEDAFIRIGSIAMVRVALDVLEPVEDDDE"
BASE COUNT          279 a          211 c          260 g          334 t
ORIGIN      
        1 ttgcccattt cagcagcgga taagcggagg ttttattatt attttcagga aaaaaacacc
       61 ccaaacatag aacgcttctt cgtttttgat tcttccgagt atcgttatgc gttaaatatg
      121 cgtgaagtgg tatttcatca gttcctttct gatggtctgc ggccaatcgt tgacgaagac
      181 gattatttta atgtccatat cacgctggta aacggcggac cagtgattcc actgagtgtt
      241 gagccagatg cgccgcaaaa cgaagagacg gatgatatcg gccagttgaa tgcatttttt
      301 gacgcgctgg attgcgagcc tgaaaccacg gatcgtttta tgataaccga cgaagatgga
      361 gaagatgctt tcattcgtat tggttctatc gctatggtgc gagttgcgct tgatgtgctg
      421 gaaccagtgg aagacgatga tgagtagtat tgaatggatt gatttcttaa gaaatggtac
      481 tgagtataca tgtgagtata caaagtaact tcgtattttt aaaaatccat tgatttcata
      541 ttgttgagtc tggaatcgcg gtgcggcctt cgcaccacac cgtatgcaaa tcgagtcgct
      601 caagagcggc tttttttgtg tctgaaatca cccatatccg tgcagtatat aggcctgcca
      661 gaaaagcagt tcagtattct tcattttgta gtcgatggtc ccaagtttgc tctggctgga
      721 agctgcatcg tccacattac gtgggcaggg tggtttcgct atgctacttg aacgttttga
      781 ccatgtggct caggtagcta ataccaaaag acgtcatttt gtctccacgc ccaccttggt
      841 gaacattcaa taaatagttt cggtcgagag cagttatgta gggctagcag acgagatgcg
      901 cagacatctt gttgaagaca attttactga ccacctgaga acgctattct accgaataat
      961 atttattatc ttggcgaata atgatgatta cctgtgtaac tatggtttta tgctgatggg
     1021 acaggcagta caatttctgt agtgtactcg caatttcagg tctctggcgt ttattctggt
     1081 gcaa
//
LOCUS       DADKRT010000364         1081 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.369, whole genome shotgun sequence.
ACCESSION   DADKRT010000364 DADKRT010000000
VERSION     DADKRT010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.369"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..772)
                     /locus_tag="JQ356_004338"
     CDS             complement(<1..772)
                     /locus_tag="JQ356_004338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY4624199.1"
                     /translation="MLPTNNNHRLISNSFSTYSIDTSRAYENYLTHWTEWKNNRIQEE
                     QRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLT
                     QLNVSYNRLIELPALPQGLKLLNASHNQLITLPTLPISLKELHVSNNQLCSLPVLPEL
                     LETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLP
                     ENLRNGYFDINQISHIPESILNLRNECSIDISDNPLSSH"
BASE COUNT          310 a          154 c          253 g          364 t
ORIGIN      
        1 catgggatga caatgggtta tcactaatat ctattgaaca ttcattcctc agattaagaa
       61 tgctttccgg gatatgactt atctgattta tgtcaaaata accgttcctt aaattttccg
      121 gcaggtatgg aatatcggtt aacatattgt cgattgccca tatggagtga atgttgtgag
      181 gtagaggggg gagttcacta agaagattcc ctattgcgct aatctcttgt aaagaaaatg
      241 gtaaaggtgg taaaactgcc agcccattac atgatacatc taatgtttcc agtagttctg
      301 gtaaaacagg aagagaacat aattgattat ttgagacatg aagctccttc aaagatatgg
      361 ggagtgtggg tagtgtgatt agttgattgt gggacgcatt caataattta agtccttgag
      421 gcaaagcagg cagttcaata agtctgttat agctgacatt aagctgtgta agggacgcag
      481 gcaatgggga gattaagctt aaattatttt tacttatatt aattgattta attcccgggg
      541 ggatttcagg taatgttgtc aggcctaatt cagacaagtc taggttcgtc tcttggtttt
      601 gtagacatga tactagtcgc tgaaaagcga tgtctcgttg ttcttcttgt atgcggttat
      661 ttttccattc agtccaatgg gttagataat tttcatatgc gcggctagtg tcgattgaat
      721 aagtggagaa cgaatttgaa attaatctgt gattgttatt tgtcgggagc ataaatatca
      781 gggcgtattc tttatgttga gaggtgttgg attctttttt atctgctttg caatgttatt
      841 ggttcccttc agcagtagac aggaacttct ggaggaggcg gatatatagt ttgtgtaagc
      901 atattaactc catatgttat atattgaaga acttctgctt tacactatcc taaactggat
      961 cggtttaatg taaaaaaacg atactttttg ggggaggggg caatttttcc ttaaggtatg
     1021 aaaaaaggag ctgaagctat ataatagcta ttaatgccac tggtatcagt gaatcatgta
     1081 t
//
LOCUS       DADKRT010000365         1076 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.370, whole genome shotgun sequence.
ACCESSION   DADKRT010000365 DADKRT010000000
VERSION     DADKRT010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.370"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..504
                     /locus_tag="JQ356_004339"
     CDS             <1..504
                     /locus_tag="JQ356_004339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS element protein"
                     /protein_id="HAY4624200.1"
                     /translation="YITQDPIGLKGGWNFYQYPLNPISEIDPQGLNPLILGVVALMSC
                     GLFSSGGVIQSGQQRREQYGRKVNPEADKLTDEHKSGVNPGGNCSPQNLSDLQNEKNR
                     LCNQSRACAPQMLRKEILRRYEINLACASVRKQINNQCFGGGDKAHMEEENKAYKTAA
                     DCSGLIK"
     gene            501..1004
                     /locus_tag="JQ356_004340"
     CDS             501..1004
                     /locus_tag="JQ356_004340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624201.1"
                     /translation="MKKIIFSNESAVYDELMIHFPCQPLPHISNDIIGLDELDIVYNF
                     FQKKQWNEIANNLKIKDDSYALELGITFLPEKVFCYYIPLYIYVSLFNKNDFWVFESD
                     FIQQYLCPEYRDYDDFLNFVFNFSDIQLSIIAQFMSYESDAGFFYASKACMDFWEDYS
                     PLLHKKI"
BASE COUNT          357 a          158 c          220 g          341 t
ORIGIN      
        1 tatatcactc aggacccaat tgggctgaag gggggatgga atttttatca gtatccgttg
       61 aatccgatct cagagataga cccacaaggg ttaaatccgt taattcttgg tgttgtagca
      121 ctgatgagtt gcggtttgtt ttcatcaggt ggtgttatcc aaagtgggca acaacgcaga
      181 gagcaatatg gacgtaaagt taatccagaa gccgacaaat taacagatga acataagtca
      241 ggtgtaaatc ctggaggtaa ctgtagtccc cagaacctga gtgacttaca aaatgaaaaa
      301 aacagattat gtaaccagtc tagagcttgc gctcctcaga tgctgagaaa agaaatattg
      361 agacggtacg agataaattt ggcgtgcgct tcggtcagaa agcagattaa taatcagtgc
      421 tttggtggtg gagataaggc ccatatggaa gaagagaata aagcatataa aacagcagct
      481 gattgcagtg gcttaataaa atgaaaaaaa taattttctc taacgagagt gcagtctatg
      541 atgaacttat gattcatttc ccatgccagc cattacctca tatttcaaat gatattatag
      601 ggctggatga actggatatt gtatataatt ttttccaaaa gaaacaatgg aatgaaatag
      661 ccaataattt aaaaataaag gatgactctt atgctttaga gttaggaatt acattcctcc
      721 ctgagaaagt attctgctat tacatccctc tgtatattta tgtctcgttg tttaataaga
      781 atgatttttg ggtttttgaa tccgatttta ttcaacaata tttatgtcct gagtatcggg
      841 attacgatga ttttttgaat tttgttttta atttttcaga tatacaacta tctattattg
      901 cacagtttat gtcttatgaa tcagacgctg gattctttta tgcaagtaaa gcttgtatgg
      961 atttttggga agattattca cctctattac ataagaaaat ttaatcgtaa aaggtataaa
     1021 tggtttaata aaaaacttgt ctactcgttg gagtagatga aaaataagat gacgtt
//
LOCUS       DADKRT010000366         1049 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.371, whole genome shotgun sequence.
ACCESSION   DADKRT010000366 DADKRT010000000
VERSION     DADKRT010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.371"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            263..1049
                     /locus_tag="JQ356_004341"
                     /pseudo
     CDS             263..1049
                     /locus_tag="JQ356_004341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
BASE COUNT          308 a          240 c          246 g          255 t
ORIGIN      
        1 cccttttgct tttatatctg cgtctaaaat aaaaatgagc cgcaggttaa ccgcaaaagt
       61 tacatgctca catagcaaaa agaatagcca acttcattat ggcttcagtg agatgtatgg
      121 tcgtaggatt tcatacattg acactggtta tacatacagt aaaaatactc tctactggag
      181 ggcatttttt atggcagtac gaaaactcac cactgggaaa tggctttgcg aatgttaccc
      241 cgccggacga agtgggcgtc gtgtgcgtaa acaattcgcc accaaaggcg aagcactggc
      301 ttttgagcgc cacacgatgg aagaaaccga agcaaagccc tggctgggtg aatcagtgga
      361 tcgtcgaaca ctgaaagacg tggttgagct atggttcaaa ctacatggta aatctctgac
      421 agctgggcag catgtctatg acaaattgct gttgatggtt gacgctctgg gcaatcctct
      481 tgcaaccgat ctcacctcta aaatgtttgc ccactatcga gataaacgcc tgacaggcgg
      541 gatctacttc agcgagaaat ggaagaaagg agcaagcccg gtcaccatta acctggagca
      601 aagctatcta agtagtgttt ttagcgaact atcccgtctg ggcgaatggt cgtatccgaa
      661 cccactggag aacatgcgaa aattcaccat cgcagaaaaa gagatggcat ggcttaccca
      721 tgagcagatt gttgaattgc tggctgattg caaacgtcag gacccaattc tggcactggt
      781 agttaagata tgcttaagca caggcgcacg ctagcgtgaa gccgtaaatc ttacccgctc
      841 acaggtgacc aaataccgaa ttacctttgt cagaacgaag gggaagaaaa acagaagcat
      901 ccctatcagt aaagagcttt acgaagagat catggcgctt gatgggttca atttcttcac
      961 agactgctat tttcaatttt tatccgtgat ggaaaaaacg tctatcgtgc tccctcgcgg
     1021 tcaactcaca cacgttctgc gccatacgt
//
LOCUS       DADKRT010000367         1039 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.372, whole genome shotgun sequence.
ACCESSION   DADKRT010000367 DADKRT010000000
VERSION     DADKRT010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.372"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>1039
                     /locus_tag="JQ356_004342"
     CDS             <1..>1039
                     /locus_tag="JQ356_004342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY4624202.1"
                     /translation="ETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRL
                     QLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQAL
                     PEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQ
                     TFHREAAGEFSGEITGVTDGAGRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLP
                     GYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSF
                     TYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLN
                     RREVLHTQGEAG"
BASE COUNT          206 a          322 c          339 g          172 t
ORIGIN      
        1 gtgaaaccga catcgccctg cccggcccgc tgccgttcat cctctcccgc acctacagca
       61 gttaccggac aaaaacgccc gcgccggtgg ggagcctcgg ccccggctgg aaaatgcctg
      121 cggatatccg cttacagctg cgcgataaca cactgatact cagtgataac ggcggcagaa
      181 gcctgtattt tgagcacctg tttcccggtg aggacggtta cagccgcagc gagtcactgt
      241 ggctggtgcg cggcggcgtg gcgaaactgg atgaaggtca ccggctggcc gcactctggc
      301 aggcgctgcc ggaagaactc cgcttaagtc cgcatcgtta tctggcgaca aacagtccgc
      361 aggggccgtg gtggctgctc ggctggtgtg agcgggtgcc ggaagcggat gaggtgctgc
      421 ctgcgccgct gccgccgtac cgggtactga ccgggctggt ggaccgcttc gggcgcacac
      481 agacgttcca ccgcgaagcc gccggtgaat tcagcggcga aatcaccggc gtgacggatg
      541 gtgccgggcg tcacttccaa ctggtactga ccacgcaggc gcagcgggca gaagaagccc
      601 ggcagcaggc catttccggc gggacggaac cgtccgcttt tcctgatacc ctgccgggtt
      661 acaccgaata tggccgggac aacggcatcc gtctgtctgc cgtgtggctg acgcacgacc
      721 cggaataccc ggagaattta cctgccgcgc cgctggtgcg ctatggctgg acgccgcgcg
      781 gcgaactggc ggcagtgtat gaccgcagca atacacaggt gcgtagcttt acttacgatg
      841 ataaataccg gggccggatg gtggcgcacc gtcacacggg ccggccggaa atccgttacc
      901 gttacgacag cgacgggcgg gtgacagaac agcttaaccc ggcaggctta agctacacgt
      961 atcagtatga gaaggaccgc atcaccatca ccgacagcct gaaccgccgt gaagtgctgc
     1021 acacgcaggg tgaagccgg
//
LOCUS       DADKRT010000368         1026 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.373, whole genome shotgun sequence.
ACCESSION   DADKRT010000368 DADKRT010000000
VERSION     DADKRT010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.373"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..441
                     /locus_tag="JQ356_004343"
     CDS             <1..441
                     /locus_tag="JQ356_004343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001193639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HAY4624203.1"
                     /translation="GVYTEMKEDDVGLYVRGRLLIDDDPLAKRAHAHMKAGSLTGLSI
                     GYVLKDWEYDRTKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIE
                     RVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVSSALNALKNLNF"
     gene            456..>1026
                     /locus_tag="JQ356_004344"
     CDS             456..>1026
                     /locus_tag="JQ356_004344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HAY4624204.1"
                     /translation="MAVDIKDVEQVAQELQQKFDDFKAKNDKRVDAIEQEKGKLAGQV
                     ETLNGKLSELENLKSDLEKELLELKRPAGGAQNKLATEHKEAFVGFLRKGRGDGLRDL
                     ERKALQVGTDEDGGYAVPEALDRNILTLLKDEVVMRQEASVITVGGSDYKKLVNLGGT
                     ASGWVGETDARSQTATSKLGLIEPFMGEIY"
BASE COUNT          275 a          247 c          312 g          192 t
ORIGIN      
        1 ggtgtttaca ccgaaatgaa ggaagacgat gtcgggcttt acgtcagggg acggttgctt
       61 attgatgatg atcccctcgc aaaacgcgca catgcacaca tgaaggccgg ttcgttaacc
      121 ggcctttcta ttgggtacgt cctgaaagac tgggaatacg accggacgaa agaagccttt
      181 ctgctgaaag aaatcgacct ctgggaagtc agtctggtga cgttcccgtc taacgacgag
      241 gcgcggatca gcgacgtcaa gaacgcgctg gcccgcgggg aaatccccga acagaaaaaa
      301 atcgaaagag tcctgcgtga tgtcggactc tcccgtaccc aggccaaagc attcatggcc
      361 gggggctatg gcgcactgtc cctgcgcgac gctgaggatg tgagctctgc actgaatgca
      421 ctgaaaaatc tgaacttcta atcaggagaa atacgatggc ggtagatatt aaagatgtcg
      481 aacaggtcgc gcaggagctg cagcagaagt ttgacgactt caaagcaaag aacgacaagc
      541 gcgtggatgc gattgagcag gaaaaaggca agcttgccgg gcaggtggaa accctgaacg
      601 ggaaactcag cgagctggaa aacctcaaaa gcgatcttga aaaagagctg cttgagctga
      661 aacgtccggc aggtggtgcg caaaataaac tggccaccga gcataaagaa gcgtttgtgg
      721 gcttcctgcg taaaggccgt ggagatggtc tgcgcgatct ggagcgcaag gcattacagg
      781 tgggcaccga tgaagacggc ggctatgccg tgccggaagc actggatcgc aacattctca
      841 ccctgctgaa agatgaagtg gtgatgcgcc aggaagcctc ggtgatcacc gttggtggtt
      901 ccgactacaa aaaactggtg aatctgggcg gcacggcttc cggatgggtt ggcgagactg
      961 acgcgcgctc ccagactgcc acctcaaaac tgggcctgat tgaacctttc atgggggaaa
     1021 tctacg
//
LOCUS       DADKRT010000369         1010 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.374, whole genome shotgun sequence.
ACCESSION   DADKRT010000369 DADKRT010000000
VERSION     DADKRT010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.374"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            201..395
                     /gene="bfd"
                     /locus_tag="JQ356_004345"
     CDS             201..395
                     /gene="bfd"
                     /locus_tag="JQ356_004345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HAY4624205.1"
                     /translation="MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
                     AAREVMQDELMQMPEFKEIA"
     gene            468..944
                     /gene="bfr"
                     /locus_tag="JQ356_004346"
     CDS             468..944
                     /gene="bfr"
                     /locus_tag="JQ356_004346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HAY4624206.1"
                     /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVE
                     YHESIDEMKHADKYIERILFLEGTPNLQDLGKLGIGEDVEEMLQSDLRLELEGAKDLR
                     EAIAYADSVHDYVSRDMMIEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD"
     gene            complement(941..>1010)
                     /locus_tag="JQ356_004347"
     CDS             complement(941..>1010)
                     /locus_tag="JQ356_004347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY4624207.1"
                     /translation="PFGPFLAAAGFVIGWDSLLIGR"
BASE COUNT          301 a          206 c          231 g          272 t
ORIGIN      
        1 gctaaagttc tgggttaatt acacgttaat tagttttgaa ttgaaaaggg cgcttcggcg
       61 ccctttttgc tgcccgtaat ttgagctcga aatatttagt cgtaattttg ctcgctgaac
      121 tatggcgcaa ataaaactgt gctattgtaa tcataatcat tctcatttac actttgcgca
      181 gaatttgaac gggagcaatc atgtacgttt gtttgtgtaa tggtgtaagt gacaaaaaaa
      241 ttcgccaggc agtccgtcag tttcatccgc aatctttcca acaattgcgt aagtttattc
      301 ctgtgggaaa tcaatgcggt aagtgcattc gcgccgcgcg cgaagtgatg caggacgagt
      361 tgatgcagat gccagaattt aaagagattg cctgaagacc acgcttattt tttgacatcc
      421 cgctagcccc atctacgctc taatagtgga agcggaggga ctataaaatg aaaggtgatg
      481 ttaaaatcat aaattatctc aataaactat tgggaaatga gcttgtcgca atcaatcagt
      541 attttctcca tgcccggatg tttaaaaact ggggcctgat gcgtctcaat gacgtcgaat
      601 accatgaatc catcgatgag atgaaacacg ctgataaata tatcgagcgt attttgtttt
      661 tagaaggaac ccccaactta caggatttag gcaaactggg gattggtgaa gatgtcgagg
      721 agatgctgca atccgacctg cgattagaac tggaaggcgc gaaggatctg cgtgaggcta
      781 tcgcatatgc cgacagcgtt catgactatg ttagccgcga tatgatgatc gagatccttg
      841 ctgatgaaga aggtcatatc gactggctcg aaactgaact ggatctcatc ggtaaaattg
      901 gcctacaaaa ttacctgcaa tcacaaatta aagttaaaga ttaacggcct atcagcaaac
      961 tatcccagcc tataacgaaa cccgcagccg ccagaaatgg cccaaaaggc
//
LOCUS       DADKRT010000370          978 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.375, whole genome shotgun sequence.
ACCESSION   DADKRT010000370 DADKRT010000000
VERSION     DADKRT010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.375"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            10..573
                     /locus_tag="JQ356_004348"
     CDS             10..573
                     /locus_tag="JQ356_004348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001542091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY4624208.1"
                     /translation="MCLAVSGAPAWASEHQSTLSAGYLQPHTDMPGSDDLKGINVKYR
                     YEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAY
                     AMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAWGAGVQFNPTESV
                     AIDLAYEGSGSGDWRTDGFIVGVGYKF"
     gene            637..>978
                     /locus_tag="JQ356_004349"
     CDS             637..>978
                     /locus_tag="JQ356_004349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004981847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4624209.1"
                     /translation="MAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTD
                     NNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKDGDLRPEV
                     MKRFEEMVVQAQ"
BASE COUNT          210 a          228 c          316 g          224 t
ORIGIN      
        1 tccgcagcca tctgtctggc tgtatccggt gcgcctgcat gggcgtctga acatcagtcc
       61 acgctgagcg ccgggtatct tcagccccat actgatatgc caggcagcga tgacctgaag
      121 ggcattaacg tgaaataccg ttatgagttt acggacacgt tggggctggt gacgtcattc
      181 agctatgcca acgctgaaga tgagcaaaaa acgcattaca gcgatacccg ctggcatgag
      241 gattccgtgc gtaaccgctg gttcagcgtg atggcggggc cgtctgtgcg cgtgaatgaa
      301 tggttcagcg cgtatgcgat ggcgggcgtg gcttacagcc gtgtgtcgac cttctccggg
      361 gattatctcc gcgtaactga caacaagggg aaaacgcacg atgtgctgac cgggagtgat
      421 gacaaccgcc acagcaacac gtctctggcg tggggggctg gcgtgcagtt taacccgacc
      481 gaatccgtgg ccattgacct tgcttatgaa ggttccggca gtggcgactg gcgcactgac
      541 ggtttcatcg tgggtgtcgg ttataagttc tgattagcca ggtaacacag tgttatgaca
      601 gcccgctggt tcaggcgggc tttttgtggg gtgaatatgg cagtaaagat ttcaggtgta
      661 ctgaaagatg gggcgggtaa acctgtcgta aattgtgcga ttgaactgcg ggccagaaga
      721 accagtccga ccgttgtggc acacgttgtt gccacttgcg tgacggacaa taacggtgct
      781 tatgtgattg aggctgagcc ggggtattac gaggttgcgc ttcactgtaa cggctggcag
      841 ccaacccgtg tcggggatat tgatgtggca ccgactgatg caccggggac actgaacgcg
      901 tttctgaatg caccaaagga tggtgattta cgtccggagg tgatgaagcg ctttgaggaa
      961 atggtggtgc aggcgcag
//
LOCUS       DADKRT010000371          968 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.376, whole genome shotgun sequence.
ACCESSION   DADKRT010000371 DADKRT010000000
VERSION     DADKRT010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.376"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..767)
                     /gene="ipaH3"
                     /locus_tag="JQ356_004350"
     CDS             complement(<1..767)
                     /gene="ipaH3"
                     /locus_tag="JQ356_004350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase IpaH3"
                     /protein_id="HAY4624210.1"
                     /translation="MSIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGE
                     NRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLPELPASL
                     EYLDACDNHLSTLPELPASLKHLDVDNNQLTMLPELPALLEYINADNNQLTMLPELPT
                     SLEVLSVRNNQLTFLPELPESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENR
                     ITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA"
BASE COUNT          275 a          154 c          239 g          300 t
ORIGIN      
        1 tgggcggttt gttgcgacag agactccctg atccgtgagg acagaggatt gtcttcgagg
       61 atgatagtgc aggtcggatc aaggctaagt atattttccg gaatgtgtgt gatgcgattc
      121 tcgcggcacc ggaaaaatat ctcggtttcc tctgagtgat gatttcttac aggtacggct
      181 ggtaggcttt ccagaagatt agtacttaca tcgagcgctt ccagtgattc aggtaactca
      241 gggagaaatg tcagctggtt atttcttact gagagcactt ccagcgatgt aggtaattca
      301 ggaagcatgg ttagctgatt gttatctgca ttaatatatt ccagcaatgc aggcaattca
      361 ggaagcatgg ttagttggtt gttatctaca tcaagatgtt tcagagatgc gggtaattca
      421 ggaagtgttg acaggtgatt gtcacaggcg tcaaggtatt ccagcgatgc tggcaattct
      481 ggtaatgata ttagggcatt ctgagtaatt tccagaacag tgatttgagg tggtaagttg
      541 tcaggtagcg aggacagatt taaacgattc agttgaagct cactgaactg attgatgaga
      601 cattctttaa gtagggagac cgcttcattc cgattttcac cggggagcgc ttgtttttcc
      661 catttatccc atgctgaaaa gtaatcagca tatgtaccgg aaatagtgtt ataaaaagaa
      721 ttttgggaca atgaaaagtt attatttatc ggtaacatga tggacattca gttaaagccg
      781 atggacaaat ggctttgtta aaagaaataa gtaggagttt ttatgaagtt cattccatga
      841 aatgaacttc agcacttttt tattataaaa ggacaaacaa aattggctgt aaaaaaacga
      901 tactgtttca gttaactgtg aatagcttgc ttgcaccgta ttgttcttgt ttttcggtta
      961 gttaaaca
//
LOCUS       DADKRT010000372          947 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.377, whole genome shotgun sequence.
ACCESSION   DADKRT010000372 DADKRT010000000
VERSION     DADKRT010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.377"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..181
                     /gene="tnpB"
                     /locus_tag="JQ356_004351"
     CDS             <1..181
                     /gene="tnpB"
                     /locus_tag="JQ356_004351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY4624211.1"
                     /translation="LWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGI
                     AWQHPKRTERPGIRI"
     gene            201..>947
                     /locus_tag="JQ356_004352"
     CDS             201..>947
                     /locus_tag="JQ356_004352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISSfl3 family transposase"
                     /protein_id="HAY4624212.1"
                     /translation="MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQL
                     DRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENRLNTARNLLEDASSVTDSPDTSP
                     PSENPIASKPESPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQL
                     DIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIP
                     LYRQSEIYARQGVELSRNTMVRWVSEMADKL"
BASE COUNT          262 a          249 c          251 g          185 t
ORIGIN      
        1 actgtgggcc gatcgtgacg ggttatgcct gttcgccaaa cgcctggaac ggggccgctt
       61 cgtctggccg gtgacccggg aagggaaagt gcacctgacg ccagctcagt tatccatgct
      121 actggagggg atcgcgtggc aacatcccaa acggacagaa cggcctggca tccggatata
      181 acccgtgata aaacaaggga atgaacaatg aactccccga tgatattgag ctgcttaaag
      241 ccatgttgcg taagcaacag agtcggcttc gacagtatgc ctgtcaggtc gcgggctatg
      301 agcaggaaat tgaacggctg aaagcgcaac tcgacaggtt gcgtcgtatg ctgttcggcc
      361 agagttcaga gaaaaagcgt cataagcttg aaaatcagat ccgacaggca gaaaaacgac
      421 tgtcggaact ggaaaaccgg ctgaacacag ccagaaatct tctggaagat gcatcgtcag
      481 tcacagattc acctgacacc agtcccccgt cagaaaaccc gatcgccagt aagcctgaat
      541 ccccgggacg aaaatcttca cgaaaaccgc tgccggcaga acttccccgg gagacacatc
      601 gccttctgcc tgctgaaacc agttgcccgg cctgtggagg tgttctgaaa gaaatggggg
      661 aaacaatctc agagcaactg gatatcatta ataccgcctt taaagttatc gaaaccatac
      721 gtcccaaact ggcctgtagc cggtgtgatg tcatcgttca ggcaccactt ccccctaaac
      781 cgatcgaacg cggttatgcc agtgcagggt tacttgcacg gatcctggtc agcaaatata
      841 tggaacatat ccctttatat cgccagtcag aaatatacgc gcgacagggc gtggagctga
      901 gccgtaatac catggtgcgc tgggtatcag aaatggcaga caaactc
//
LOCUS       DADKRT010000373          947 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.378, whole genome shotgun sequence.
ACCESSION   DADKRT010000373 DADKRT010000000
VERSION     DADKRT010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.378"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>947
                     /gene="tuf"
                     /locus_tag="JQ356_004353"
     CDS             <1..>947
                     /gene="tuf"
                     /locus_tag="JQ356_004353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY4624213.1"
                     /translation="HVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATD
                     GPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDT
                     PIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGT
                     VVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKR
                     EEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI
                     ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGR"
BASE COUNT          221 a          244 c          269 g          213 t
ORIGIN      
        1 cacgttgaat acgacacccc gacccgtcac tacgcacacg tagactgccc ggggcacgcc
       61 gactatgtta aaaacatgat caccggtgct gctcagatgg acggcgcgat cctggtagtt
      121 gctgcgactg acggcccgat gccgcagact cgtgagcaca tcctgctggg tcgtcaggta
      181 ggcgttccgt acatcatcgt gttcctgaac aaatgcgaca tggttgatga cgaagagctg
      241 ctggaactgg ttgaaatgga agttcgtgaa cttctgtctc agtacgactt cccgggcgac
      301 gacactccga tcgttcgtgg ttctgctctg aaagcgctgg aaggcgacgc agagtgggaa
      361 gcgaaaatcc tggaactggc tggcttcctg gattcttaca ttccggaacc agagcgtgcg
      421 attgacaagc cgttcctgct gccgatcgaa gacgtattct ccatctccgg tcgtggtacc
      481 gttgttaccg gtcgtgtaga acgcggtatc atcaaagttg gtgaagaagt tgaaatcgtt
      541 ggtatcaaag agactcagaa gtctacctgt actggcgttg aaatgttccg caaactgctg
      601 gacgaaggcc gtgctggtga gaacgtaggt gttctgctgc gtggtatcaa acgtgaagaa
      661 atcgaacgtg gtcaggtact ggctaagccg ggcaccatca agccgcacac caagttcgaa
      721 tctgaagtgt acattctgtc caaagatgaa ggcggccgtc atactccgtt cttcaaaggc
      781 taccgtccgc agttctactt ccgtactact gacgtgactg gtaccatcga actgccggaa
      841 ggcgtagaga tggtaatgcc gggcgacaac atcaaaatgg ttgttaccct gatccacccg
      901 atcgcgatgg acgacggtct gcgtttcgca atccgtgaag gcggccg
//
LOCUS       DADKRT010000374          944 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.379, whole genome shotgun sequence.
ACCESSION   DADKRT010000374 DADKRT010000000
VERSION     DADKRT010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.379"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            98..736
                     /gene="ytfB"
                     /locus_tag="JQ356_004354"
     CDS             98..736
                     /gene="ytfB"
                     /locus_tag="JQ356_004354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YtfB"
                     /protein_id="HAY4624214.1"
                     /translation="MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVV
                     GFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQ
                     EGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVE
                     GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR"
     gene            complement(720..>944)
                     /locus_tag="JQ356_004355"
     CDS             complement(720..>944)
                     /locus_tag="JQ356_004355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709992.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624215.1"
                     /translation="EGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMV
                     SPQALEARRKVIKETILSWLLVDPSSTAHE"
BASE COUNT          252 a          240 c          250 g          202 t
ORIGIN      
        1 gtatgaatat aataaaggcg ggtttaccac ggacatcata gcgttagctt attcataggc
       61 tatgattgag gaacaagacg cggagcagga ggaaaccatg cccgggcgct ttgaactaaa
      121 accaaccctg gagaaagtct ggcacgcgcc ggacaatttt cgcttcatgg acccgctgcc
      181 gccgatgcat cgtcggggga tcattattgc cgccattgta ttggtggtcg gatttctgct
      241 tccatctgat gatacgccca acgcgccggt ggtgacgcgt gaagcgcagt tagatattca
      301 gtcgcaatca caaccgccga cagaagaaca gctgcgggcg caattagtca caccacaaaa
      361 tgatcctgat caggtggctc cggtcgctcc agaacctata caggaaggcc agccagaaga
      421 gcagccgcaa actacccaaa cgcaaccatt ccagccagat agcggaattg ataatcaatg
      481 gcgctcttac cgtgtcgaac ccggtaaaac gatggcgcag ctgttccgcg accacggact
      541 gcccgctacc gatgtctatg caatggcgca ggtagaaggc gcgggtaagc cgctgagtaa
      601 tttgcaaaac gggcagatgg tgaaaatccg ccagaacgcc agcggcgtgg tgacgggctt
      661 aaccattgat acggggaata atcaacaggt cctgttcacc cgccagccgg atggcagttt
      721 tattcgtgcg cggtagatga agggtcaacc aaaagccagc taaggattgt ctctttgatg
      781 accttacgtc tggcttccag tgcctggggg gaaaccatac tgatatgata aaccaggcca
      841 agcgtatgct ggttgatcaa ataatatccg ccaagcgcag caatattaat attcacctgc
      901 aatgggtcga tatctggctt aaaaatattg tgtttcttcc cttc
//
LOCUS       DADKRT010000375          942 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.380, whole genome shotgun sequence.
ACCESSION   DADKRT010000375 DADKRT010000000
VERSION     DADKRT010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.380"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            6..566
                     /locus_tag="JQ356_004356"
                     /pseudo
     CDS             6..566
                     /locus_tag="JQ356_004356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001367725.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(612..688)
                     /locus_tag="JQ356_004357"
     tRNA            complement(612..688)
                     /locus_tag="JQ356_004357"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(652..654),aa:Arg,seq:tct)
BASE COUNT          261 a          227 c          216 g          238 t
ORIGIN      
        1 atctgttgtt tttaaataag aacttaacct gtgtaaagcc ctagtcgcgg ctggcaaccc
       61 cggttatcgc ttgtcatagc cgtacaccgg aagtgttccg gctagccgcc aaccacagca
      121 agcagcaacc cagcaaaccc tgcgaagcgg agttgacgcg cgcattactt tttaccgtat
      181 tgtctaactt tcttgagcaa tcgcggttta ttgccctact gatgtatatc ttacgcagca
      241 gcgtccgcga cagcgtctgc cgcattattc aaagcgatat tcagcattac tggaatctgc
      301 gaattgtcgc cagttcgcta tgtttaagcc ccagcctgct caaaaagaaa ttaaaaaacg
      361 aaaataccag ctatagccag attgtcacag agtgtcgtat gcgttacgcc gtacagatgt
      421 tattgatgga taacaaaaat atcactcagg tggcgcaatt atgtggctat agcagcacgt
      481 cgtactttat ctctgttttt aaggcgtttt acggcctgac accgttgaat tatctcgcca
      541 aacagcgaca aaaagtgatg tggtgaaggg caaagcggaa acggataaga cgggcataaa
      601 tgaagaagaa atggcgcgcc ctgcaggatt cgaacctgcg gcccacgact tagaaggtcg
      661 ttgctctatc caactgagct aagggcgcgt tgataccgca atgcggtgta atcgcgtgaa
      721 ttatacggtc aacccttgct gagtcaatgg cttttgatct ggttgctgaa caagtgaacg
      781 accgcgtctg attttctgat ttatttcgct atagcggcaa acaaacgcac accgctgcgc
      841 gtctgaatca agaaaacccg tattttcatg tatcaaagta caatttaccg ccctaacgga
      901 aaattgtccg ctcctatgag actggtaact atgaaaccaa cg
//
LOCUS       DADKRT010000376          935 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.381, whole genome shotgun sequence.
ACCESSION   DADKRT010000376 DADKRT010000000
VERSION     DADKRT010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.381"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..217)
                     /locus_tag="JQ356_004358"
     CDS             complement(<1..217)
                     /locus_tag="JQ356_004358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HAY4624216.1"
                     /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
                     YTASQPGTHQKIIDMAMNGVGCRATARI"
     gene            complement(274..879)
                     /gene="capU"
                     /locus_tag="JQ356_004359"
                     /pseudo
     CDS             complement(274..879)
                     /gene="capU"
                     /locus_tag="JQ356_004359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
BASE COUNT          272 a          221 c          199 g          243 t
ORIGIN      
        1 taatgcgggc ggttgcccgg catccaacgc cattcatggc catatcaatg attttctggt
       61 gcgtaccggg ttgagaagcg gtgtaagtga actgcagttg ccatgtttta cggcagtgag
      121 agcagagata gcgctgatgt ccggcggtgc ttttgccgtt acgcaccacc ccgtcagtag
      181 ctgaacagga gggacagctg atagaaacag aagccactgg agcacctcaa aaacaccatc
      241 atacactaaa tcagtaagtt ggcagcatca cctaaattcg tgcccttttt ccgggcgcaa
      301 cattcctacc tgagcaatta cggggcatcc tcttcgggac gccagccagg aaagaacact
      361 cggaggcaaa ctgtttcggg aatcaacgta taattcctgg aaatcaaagc caggaggcac
      421 aacagtaacc cgagttcgac atccttcctg ctccagatgt gtcttcatat ttgttccggg
      481 aacaatcacc tcatcgcaaa aatgatttat tgaaaaaaat tttgtttttc gtgtcaaata
      541 tgtcttttgc ctgataattc tgaatggatg tttccaggta aaaaaccgta ccaaaccaac
      601 aatattacta tcatgtccac tgtgacaaac gattgcatcg ggctgaaaac tatgaactat
      661 tccgagtaat ctccatacag taggaatgtg aagactgttt cgaaataacg cgaatgtgat
      721 atcaattcca aacttactgg cttcaaaagc aattttgctg ttctccctgc agacaagcag
      781 aactgaatgc cccattttct tcagggcctt catttgagca acagcctgta attcctgacc
      841 acctatattc ggtgatgatt ccgtaaatag tatattcatt attagtcatc cggtaatctt
      901 ggccccttat gaagggccag caacgatgaa aaaaa
//
LOCUS       DADKRT010000377          921 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.382, whole genome shotgun sequence.
ACCESSION   DADKRT010000377 DADKRT010000000
VERSION     DADKRT010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.382"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..>921)
                     /locus_tag="JQ356_004360"
     CDS             complement(<1..>921)
                     /locus_tag="JQ356_004360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY4624217.1"
                     /translation="RFSYGITGGNVFFSCLVFVFFYFAILMTVSADMPLVGCVLTLSL
                     LVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFIST
                     KMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDT
                     AYCIKYAILAFLALLPFLAVAGYIIFEQILNAYDSSVYANDDIENLQQFMEMQRKMII
                     AQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISG
                     ITGGLAYPLLKIWMIDWQAKNTYLLGDLDDL"
BASE COUNT          354 a          207 c          141 g          219 t
ORIGIN      
        1 aaggtcatcc aaatcgccca gcaaatacgt attttttgcc tgccagtcaa tcatccatat
       61 tttcagcagt ggataagcca gaccgcccgt aatcccggat atcactacca acgcacacat
      121 gcgataaagc ataccgtggt acgttaaagt tgagcgaaaa cgaatacgcc catcattcag
      181 tgacaggtta ctcataaaat gatttcgcaa cgacaccgtt aaataactgg tgctaacagc
      241 aatcccaaaa taatagatta actgcgcgat tatcatttta cgttgcattt ccataaattg
      301 ctgtaaattc tcaatatcat catttgcata cacagaacta tcatacgcat ttaatatttg
      361 ttcgaagata atataaccag caacagcgag aaaaggtaat aaagctaaaa atgcgaggat
      421 ggcatatttt atacaatacg cagtatctaa tttcaccttg aaacgatgta taccgaaact
      481 ggtattgctc cagagaaaac tcattaccag gctatataaa gtaccattaa aaataccaat
      541 ggaaacaata ccaactattg ccatcagaac cacagatata ataacactac ttgaactatt
      601 ggcatgtagc atctttgtcg agataaagaa aacagtcccc atcccaatgg ccattaaaat
      661 cggcaagaaa aaggttaccc accagaaccc tttcatagag caattaaaac taaatcttac
      721 gccgttgaga ctagtcatca aggcctgata acgcagtcct tttgctgcca taaatataag
      781 caaaaccaac agtgacaaag tcaaaacaca gccaacaagc ggcatatctg ctgacactgt
      841 cattaagatt gcgaaataga aaaaaacaaa aacaagacaa ctaaaaaaaa cattcccacc
      901 agtaattcca taagaaaatc g
//
LOCUS       DADKRT010000378          909 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.383, whole genome shotgun sequence.
ACCESSION   DADKRT010000378 DADKRT010000000
VERSION     DADKRT010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.383"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..>909)
                     /locus_tag="JQ356_004361"
     CDS             complement(<1..>909)
                     /locus_tag="JQ356_004361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4624218.1"
                     /translation="AFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSAIMGILV
                     SQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFASTANPQ
                     MFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAIAF
                     VVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINM
                     PLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYA
                     SVLMATTPAVELELQILNAIFLGILCG"
BASE COUNT          280 a          214 c          213 g          202 t
ORIGIN      
        1 ccacagagaa taccaaggaa gatggcattt agaatttgca attccagctc aaccgccgga
       61 gtcgtcgcca tgagtacgct ggcgtaaaaa cacataccac tcacgatagc aatgagcatt
      121 aatagtcgct tgccaatacg tttcatgtaa tagcctgcga ttaacatcat cggaatttcc
      181 agaccggcag cgataccaat catttctcca gccagtttat cggttagatg cagttcatca
      241 ataataaata gcggcatatt tatcatgtag agattattcg ccgcccacat cattgaacag
      301 accacaaaaa gtagccgcgt atcccgcttc ctatgggtgg agggtaaaat ttctacgggt
      361 tgggtaacga caggaatatt tctttgtatt gatggcaaaa acaaccagac tatcagcccg
      421 caaacaacaa atgcgatggc agcggtgaga tacatcactt taaaactaaa ccccattgcc
      481 agttcataag cgagcggtgg cccgataacc caggcaagcg agatctgagc acgtaaaaat
      541 gtactgaaca tgaccgtctc acggcctgtt ctgtcggcgt gttcacgggc gagggcgaac
      601 atttgcgggt ttgcggtaga agcaaaacta ctcagaagta cgcccgtaga gaggagaatg
      661 aagtagttgc gattccacgc aaaaagcgtg caggccagca ctccaaataa gcaacatagc
      721 agaatcagta atttacggtc gccttgttta tcggagtgcc ttgccagaaa ttgactgacc
      781 agaattccca taatagcgct accggtgaag aaaaaaccta ccattatagg acgggctttc
      841 agttcatctg cgaggaatat acttagggta ggagtctgaa gagcgcccgc aatacccgtc
      901 agaaaggcg
//
LOCUS       DADKRT010000379          887 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.384, whole genome shotgun sequence.
ACCESSION   DADKRT010000379 DADKRT010000000
VERSION     DADKRT010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.384"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..323
                     /locus_tag="JQ356_004362"
     CDS             <1..323
                     /locus_tag="JQ356_004362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2612 domain-containing protein"
                     /protein_id="HAY4624219.1"
                     /translation="APFYNGKSDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINRML
                     RFMFGKKRRAYVLNNGGLRMSYIFESALSLAELAIIQSSGALPSPPGVYVSVVLKESR
                     NEGQ"
     gene            310..>887
                     /locus_tag="JQ356_004363"
     CDS             310..>887
                     /locus_tag="JQ356_004363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000647603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4624220.1"
                     /translation="MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFP
                     PVTMTAVSAGGIPPHGKDFNGLMYDITAAIRFAQAGGLYTYNAGFAGAIGGYAKGAIL
                     AGVATTAVWLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTVRDN
                     LQVYSKEQSDQRYVHREGDKITGELKIRGVNAL"
BASE COUNT          228 a          203 c          250 g          206 t
ORIGIN      
        1 aggcaccgtt ttacaacgga aaatcggata cccggactgt tgacctgtct gatgctgtat
       61 accggcggct gatactgatg aaagccatgt cgaacattac tgactgttcc gttccggata
      121 ttaaccggat gctgagattt atgttcggaa aaaaacggcg agcttatgtt ctgaataatg
      181 gtgggctgag gatgagttac atctttgagt ccgcgctctc gttggcagaa ctggcgatta
      241 tccagtcgtc gggtgcactg ccgtccccgc cgggtgttta tgtttcagta gttttaaagg
      301 agtcccgtaa tgaaggccag tgataaaccc cgccagctgg cggtcccctt tgcgagtacc
      361 ggagataaaa accgtatccc ggacaaggcg acacagcaga ccagagagag cggtaatgct
      421 gcgtatgatt caggttttcc tccggtgacc atgacagcgg tctcagcggg aggtataccg
      481 ccacacggca aggattttaa cggtctgatg tacgatatta ccgcagcaat acggttcgcc
      541 caggctggcg gtttgtacac gtataatgcc ggttttgcgg gggccattgg tggatatgca
      601 aaaggagcca ttctcgccgg agtcgcaaca acagcggtct ggctgaatac cacagacgat
      661 aacctgaccg atcctgaagg ctccgacagt gcgggctggg taaatcttct tgaggatccg
      721 aaaaggatat tcctgcggca gaagaacaat ctgtcagacc ttcagaataa agggacggta
      781 cgggataatc ttcaggttta cagtaaagag cagtcagatc aacgctatgt tcatcgggaa
      841 ggcgataaaa taaccggaga gctgaaaatc cgtggtgtta atgcgct
//
LOCUS       DADKRT010000380          865 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.385, whole genome shotgun sequence.
ACCESSION   DADKRT010000380 DADKRT010000000
VERSION     DADKRT010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.385"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..841
                     /locus_tag="JQ356_004364"
     CDS             <1..841
                     /locus_tag="JQ356_004364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY4624221.1"
                     /translation="LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC
                     IGVEILLRWNNPRQGRISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHV
                     GINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVK
                     LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIEL
                     VAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM
                     PLR"
BASE COUNT          200 a          220 c          222 g          223 t
ORIGIN      
        1 actggtgggc tacatcgcct ggctggcgac cgcttaccgg atgagctttt cccgcgaaat
       61 caatctgggc ctggcgcaac atgagttcga attgttctgt cagcctttgc ttaatgcgcg
      121 cagccagcaa tgtattggtg tagagatttt gctgcgctgg aacaatccgc gtcagggccg
      181 gatttcaccg gatgtgttta ttcctatcgc ggaagaacat catttaattg tgccactgac
      241 ccgctatgtg atggcagaaa ccattcgtca gcgccatgtt ttcccgatga gtagtcagtt
      301 tcatgttggc attaacgtcg cacccagcca ttttcgccgt ggtgtgctga taaaagatct
      361 caatcagtac tggtttagcg ctcacccgat tcagcaactg atcctcgaaa tcaccgaacg
      421 cgatgcctta ctggatgttg attatcggat tgcccgcgag ctacatcgta aaaacgtcaa
      481 actggcgatt gatgacttcg gcaccggcaa cagttcattt tcctggcttg aaacattacg
      541 tcctgacgtg ctgaaaattg ataagtcatt taccgcagct ataggttctg acgcggttaa
      601 ctcgacggtg accgatatca tcatcgcgct ggggcaaaga ctgaatattg aactggtggc
      661 ggagggcgtg gaaacgcaag aacaggcgaa gtatttgcgc cgtcatggcg tgcatatttt
      721 gcaagggtat ttgtacgcac agccgatgcc gctacgcgat tttcccaaat ggctggcggg
      781 cagccaaccg ccgcccgccc ggcataatgg acatatcacg cccattatgc cgttacgtta
      841 acgctgatat gactttccgt gtcaa
//
LOCUS       DADKRT010000381          862 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.386, whole genome shotgun sequence.
ACCESSION   DADKRT010000381 DADKRT010000000
VERSION     DADKRT010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.386"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>862
                     /locus_tag="JQ356_004365"
     CDS             <1..>862
                     /locus_tag="JQ356_004365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY4624222.1"
                     /translation="EHADGSVTQSQFDAVGRLRTQTDAAGRTTEYSPDVVTGLITRIT
                     TPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDIIRYRYDNPHS
                     DLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYR
                     AYDSRGQLIAVKDTQGHETRYEYNAAGDLTAVIAPDGSRNGTQYDAWGKAIRTTQGEL
                     TRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSE
                     DEGLVTHWHYD"
BASE COUNT          212 a          254 c          258 g          138 t
ORIGIN      
        1 gaacacgcgg acggcagcgt cacgcagagt cagtttgacg ccgtgggcag gctcaggaca
       61 cagacggatg ccgcaggccg gacaacagaa tacagcccgg atgtggtgac gggcctcatc
      121 acgcgcatca ccacgccgga tggcagggca tcggcgtttt actataacca ccacagccag
      181 ttaacgtcag ccaccgggcc tgacgggctg gaaatacgcc gggaatatga tgaatggggc
      241 cgtctgattc aggaaactgc ccctgacggc gatatcatcc gctaccgtta tgataatcca
      301 cacagtgact taccctgcgc aacggaagat gccaccggta gccggaaaac catgacgtgg
      361 agccgttacg gtcagttgct gagcttcacc gactgttccg gttatgtaac ccgttatgac
      421 catgaccgct tcgggcagat gacggcggtg caccgcgagg aagggctgag tcagtaccgc
      481 gcatacgaca gccgtggaca gttaattgcc gtgaaagaca cgcagggcca tgaaacgcgg
      541 tatgaataca acgccgccgg tgacctgacc gccgtcattg ccccggacgg cagcagaaac
      601 gggacacagt acgatgcgtg gggaaaggcc atccgtacca cgcagggcga gctgacgcgc
      661 agtatggaat acgatgctgc aggacgggtc atccgcctga ccagtgaaaa cggcagccac
      721 accaccttcc gttacgatgt actcgaccgg ctgatacagg aaaccggctt tgacggccgc
      781 acacagcgtt atcaccacga cctgaccggc aaacttatcc gcagcgagga tgaggggctg
      841 gtcacccact ggcactatga cg
//
LOCUS       DADKRT010000382          832 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.387, whole genome shotgun sequence.
ACCESSION   DADKRT010000382 DADKRT010000000
VERSION     DADKRT010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.387"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..832
                     /locus_tag="JQ356_004366"
                     /pseudo
     CDS             1..832
                     /locus_tag="JQ356_004366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611435.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS2 family transposase"
BASE COUNT          206 a          198 c          258 g          170 t
ORIGIN      
        1 aagaaaacga tggaaaatga actcctcaaa gaagccgttg aatatggacg ggcaaaaaag
       61 tggatagcgc acgcgccctt attgcccggg gatggggagt aagcttagtc agccgttgtc
      121 tccgggtgtc gcgtgcgcag ttgcacgtca ttctcagacg aaccgatgac tggatggatg
      181 gccgccgcag tcgtcacact gatgatacgg atgtgcttct ccgtatacac catgttatcg
      241 gagagctgcc cacgtatggt tatcgtcggg tatgggcgct gcttcgcaga caggcagaac
      301 ttgatggtat gcctgcgatc aatgctaaac gtgtttaccg gatcatgcgc cagaatgcgc
      361 tgttgcttga gcgaaagcct gctgtaccgc catcgaaacg ggcacataca ggcagagtgg
      421 ccgtgaaaga aagcaatcag cgatggtgct ctgacgggtt cgagttctgc tgtgataacg
      481 gagagagact gcgtgtcacg ttcgcgctgg actgctgtga tcgtgaggca ctgcactggg
      541 cggtgactac cggcggcttc aacagtgaaa cagtacagga cgtcatgctg ggagcggtgg
      601 aacgccgctt cggcaacgat cttccgtcgt ctccagtgga gtggctgacg gataatggtt
      661 catgctaccg ggctaatgaa acacgccagt tcgcccggat gttgggactt gaaccgaaga
      721 acacggcggt gcggagtccg gagagtaacg gaatagcaga gagcttcgtg aaaacgataa
      781 agcgtgacta catcagtatc atgcccaaac cagacgggtt aacggcagca aa
//
LOCUS       DADKRT010000383          823 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.388, whole genome shotgun sequence.
ACCESSION   DADKRT010000383 DADKRT010000000
VERSION     DADKRT010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.388"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            129..823
                     /locus_tag="JQ356_004367"
                     /pseudo
     CDS             129..823
                     /locus_tag="JQ356_004367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416847.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          311 a          152 c          135 g          225 t
ORIGIN      
        1 cccccctggc tattgtgcgc tcatacactc aaattaaaga taggttctaa ataaatgagc
       61 gttttttgat agtctatttc attaggtaat atatatttgt aacaaatcaa tcaaaatgga
      121 ataaaatcat gctaccatct atttcaatca acaataccag cgcaacttac ccagaatcca
      181 ttaatgaaaa taacaatgat gaagttaatg gattagtaca agagctcaaa aaccttttta
      241 atggtaagga ataagcacct gtattaaaca tctacttgag cttataaaaa acgccatacg
      301 agtaaacgac gatccttata gatttaatat taataattcc tcagttactt atattgatat
      361 tggctccaat gatacagacc atattactat gggtatcgac aaccaagaac caatagaatt
      421 acctgcgaac tataaagaca aagaactcgt ccgtactatc attaatgaca acatagttga
      481 gaagactcat gatatcaata acaaggaaat gatcttcagc gcattaaaag aaatatatga
      541 tggagctcct agttttatct tcgataagat atcacacaaa ctcagacata cggtaacgga
      601 atttgatgag agcgggaaaa gcgaaccaac ggacttattt acctggtacg gtaaagataa
      661 aaaaggcgac tctctcgcta ttgtaattaa aaataaaaac ggaaatgatt acttatccct
      721 cggttactac gatcaggacg actaccacat tcaaagagga attcgtatta atggtgatag
      781 tctcacccaa tattgtagtg aaaacgccag gagtgcttca gcg
//
LOCUS       DADKRT010000384          811 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.389, whole genome shotgun sequence.
ACCESSION   DADKRT010000384 DADKRT010000000
VERSION     DADKRT010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.389"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..346
                     /locus_tag="JQ356_004368"
     CDS             <1..346
                     /locus_tag="JQ356_004368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624223.1"
                     /translation="VMCLTKPAFSYYIAAYLKLFIENYYEADALVDTILNMLTPPVRN
                     GIPSTTWIAKNLDCFSRNKRVAISFTFQYLCNEYNDPNTEKALNIYWGQYLNESLLIK
                     NVQNSKNKCKSQ"
     gene            complement(407..592)
                     /locus_tag="JQ356_004369"
     CDS             complement(407..592)
                     /locus_tag="JQ356_004369"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624224.1"
                     /translation="MIMVAVAAAVTDALLVFFRQLAPFVVLPALGIFIIHGTVRQAVG
                     FIVMPERDQALMSLTVI"
     gene            591..794
                     /locus_tag="JQ356_004370"
     CDS             591..794
                     /locus_tag="JQ356_004370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000977355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY4624225.1"
                     /translation="MMKNQMEPEYTPLRKIHLYHCDHRGLPLALIRSDGRTGWRVEYD
                     EWGNLLSEDNPHRERSSEVHFLY"
BASE COUNT          251 a          170 c          188 g          202 t
ORIGIN      
        1 tgtcatgtgt ctcactaaac cagcattctc atattatatt gcagcctatt taaaactttt
       61 tattgaaaat tattacgaag ctgatgcttt agtggatact attttaaata tgctcactcc
      121 tcctgttagg aatggtatcc ccagcactac atggatagca aaaaatcttg attgctttag
      181 tcgtaataaa agggtggcta tttcttttac attccaatat ttatgtaatg aatataatga
      241 tccaaatact gaaaaggcgt taaatatata ttggggacag tatctgaatg aatcattgct
      301 tattaaaaat gtacagaact ctaaaaataa atgtaaatca cagtaagaca gaaccaagca
      361 gaaatcgtgg gcgtggttcg caccctgacg gagggtgtag cgtgtactag atcacagtga
      421 gcgacatcaa agcttggtca cgttctggca ttacgatgaa gccgaccgcc tgacgcaccg
      481 taccgtgaat gatgaagatg ccgagtgctg gcagtacaac gaacggggct agctgacgga
      541 aaaagacgag cagcgcatcc gtgacggcgg cagccacagc caccattatc atgatgaaaa
      601 accagatgga gccggaatac acgccgctgc gtaaaattca cctgtaccac tgcgaccacc
      661 ggggactgcc gctggcgctg atacgcagtg acggccgaac cggatggcgt gtagagtatg
      721 acgaatgggg caacctgctg agtgaggata acccgcacag ggaaagatca tcagaagttc
      781 actttttgta ctaaataatt cgcattttac g
//
LOCUS       DADKRT010000385          791 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.390, whole genome shotgun sequence.
ACCESSION   DADKRT010000385 DADKRT010000000
VERSION     DADKRT010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.390"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            3..>791
                     /gene="fdrA"
                     /locus_tag="JQ356_004371"
     CDS             3..>791
                     /gene="fdrA"
                     /locus_tag="JQ356_004371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
                     /protein_id="HAY4624226.1"
                     /translation="MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKA
                     LLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGAGSSQSL
                     TQVRRWDSACQKLSDANLALISVAGEYAAELANQALERNLNVMMFSDNVTLEDEIQLK
                     TRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIAQAGE
                     GITHAIGLGERDLSREVGGISALTALEMLSADEKSEVLAFVSKPP"
BASE COUNT          191 a          181 c          244 g          175 t
ORIGIN      
        1 ttatgatcca cgcctttatt aaaaaagggt gttttcagga ttcggtcagt ttaatgatta
       61 tttcacgaaa actcagcgaa tcagaaaatg ttgatgatgt ttccgtaatg atgggtacgc
      121 ccgccaataa agcgttatta gataccacag gtttctggca tgacgatttt aataacgcca
      181 cgccgaacga tatttgcgtg gcaattcgta gcgaagcggc ggatgcgggg atcgcgcagg
      241 cgattatgca gcagcttgaa gaggcgctaa aacaactggc gcagggggca ggcagcagcc
      301 agtccttgac gcaggtgcgt cgctgggaca gtgcctgtca gaaattatcc gatgccaatc
      361 tggcgctgat ttcagtggct ggcgagtatg cggcggagct ggcgaatcag gcgctggagc
      421 gcaacctcaa cgtgatgatg ttctccgata acgtcacgct ggaagatgaa atccaactta
      481 aaacccgcgc gcgagaaaaa ggcttgctgg tgatggggcc ggactgcggt acgtcgatga
      541 ttgccggcac gccgctggct tttgctaacg tgatgccgga aggcaacatt ggcgtcattg
      601 gcgcttccgg taccgggatt caggaactgt gttcgcagat tgcgcaggca ggggagggaa
      661 ttactcacgc gattggtctt ggcgagcgcg acctcagccg tgaagtaggc ggcatcagtg
      721 cgctgacggc gctggaaatg ctcagtgcag acgagaaaag cgaagtgctg gcatttgttt
      781 caaagccacc t
//
LOCUS       DADKRT010000386          788 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.391, whole genome shotgun sequence.
ACCESSION   DADKRT010000386 DADKRT010000000
VERSION     DADKRT010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.391"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..186)
                     /locus_tag="JQ356_004372"
     CDS             complement(<1..186)
                     /locus_tag="JQ356_004372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY4624227.1"
                     /translation="MKSMDKISTGIAYGTSAGSAGYWFLQWLDQVSPSQWAAIGVLGS
                     LLLGLLTYLTNLYFKIRE"
     gene            complement(479..553)
                     /locus_tag="JQ356_004373"
     tRNA            complement(479..553)
                     /locus_tag="JQ356_004373"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(518..520),aa:Gly,seq:tcc)
     gene            complement(557..632)
                     /locus_tag="JQ356_004374"
     tRNA            complement(557..632)
                     /locus_tag="JQ356_004374"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(597..599),aa:Thr,seq:tgt)
     gene            complement(635..711)
                     /locus_tag="JQ356_004375"
     tRNA            complement(635..711)
                     /locus_tag="JQ356_004375"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(675..677),aa:Arg,seq:tct)
BASE COUNT          227 a          200 c          190 g          171 t
ORIGIN      
        1 ttctcttatt ttgaaataca gattcgtcag ataagtcaga agccccagaa gcagacttcc
       61 cagcacacca atcgcagccc actgtgatgg actgacctga tccaaccact gcaaaaacca
      121 gtagccggca ctgccggcgg aggtgccgta ggcaatgccc gttgaaattt tgtccatgga
      181 tttcatagcc tcacctccgc aaataacgga tggcgtagtt ttacactgag aaatgaaagg
      241 gatttgaaaa gaaaaaaacg caaaagcggg cgaaacgata tatacagtaa ggaaagcact
      301 ctatccaaca aaccacccac agttaatcgg aataaaagca gagtgcttat gaatgatcgc
      361 acgcccgaag gttagtattt ctgcacagca attttgcaaa aaaaggcgat cattcataac
      421 ttaaacgtct ttcagtcact ccgggatttc ccatcatcgc agactgaaag actctgactg
      481 gagcgggcag cgggaatcga acccgcatca tcagcttgga aggctgaggt aatagccatt
      541 atacgatgcc cgcatatggt gccgactacc ggaatcgaac tggtgaccta ctgattacaa
      601 gtcagttgct ctgcctgctg agctaagtcg gcgctggccc accaccgagg actcgaacct
      661 cgcaccgtca acttagaagg ttgatgctct atccggatga gctagtggtg gttggtggcc
      721 cttgctggac ttgaaccagc gacctggcga ttatgagtcg ctcgctctga ccaactgagc
      781 taaagggc
//
LOCUS       DADKRT010000387          772 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.392, whole genome shotgun sequence.
ACCESSION   DADKRT010000387 DADKRT010000000
VERSION     DADKRT010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.392"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>772
                     /locus_tag="JQ356_004376"
     CDS             <1..>772
                     /locus_tag="JQ356_004376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HAY4624228.1"
                     /translation="MPLLDKLRKLYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARA
                     QRDDWLKKEILRVYDGNHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGK
                     KVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIV
                     GWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTG
                     STGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATL"
BASE COUNT          184 a          184 c          235 g          169 t
ORIGIN      
        1 tgatgccact gctggataag ctgcgtaagc tgtacggggt cggaccggta tgcagtgaac
       61 tacatattgc cccgtcaacg tattaccact gtcagcaaca gcgacatcat cctgataaac
      121 gcagtgcccg tgcgcagcgc gatgactggc tgaagaaaga gatactgcgc gtatacgatg
      181 ggaatcatca ggtatacggt gtgcgtaaag tctggcgtca gttgttacgg gaaggtatca
      241 gagtggccag atgcactgtg gcacgtctca tggcggttat gggacttgcc ggtgttctcc
      301 ggggtaaaaa ggtccgtacg accatcagcc ggaaagccgt tgccgcaggc gaccgcgtaa
      361 accgtcagtt cgtggcagaa cgacctgacc agctgtgggt ggctgatttt acttacgtca
      421 gcacatggca gggcttcgtc tatgtggcgt tcattattga tgtgtttgcc ggatacatcg
      481 tggggtggcg ggtctcatcg tccatggaaa cgacattcgt gctggatgct ctggagcagg
      541 cgttatgggc ccgtcgaccg tccggcacgg tccatcacag tgataaaggt tctcagtatg
      601 tatcgctggc ctacacacag cggcttaagg aagccggatt actggcatca acaggaagta
      661 caggcgactc gtatgacaac gcgatggcgg agagcatcaa tggtctttac aaagcggagg
      721 taatacaccg taagagctgg aaaaaccgtg cagaagtgga actggccaca ct
//
LOCUS       DADKRT010000388          768 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.393, whole genome shotgun sequence.
ACCESSION   DADKRT010000388 DADKRT010000000
VERSION     DADKRT010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.393"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            110..>768
                     /locus_tag="JQ356_004377"
     CDS             110..>768
                     /locus_tag="JQ356_004377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001063816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISSso6 family transposase"
                     /protein_id="HAY4624229.1"
                     /translation="MNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQN
                     LCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDCMVCAPSLIPKKPGERVKTDRRD
                     AIRLVRSLRAGDLSAVYVPGIEDEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHY
                     VGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRL
                     YP"
BASE COUNT          184 a          187 c          208 g          189 t
ORIGIN      
        1 tgagacagat gctggccaac gtgggatatt taacgcgggt taacatcgtt gtcagagccg
       61 catgggtgag ctgttgctac accccggtat ttccaccacg gaggccagca tgaacaacaa
      121 taacacattg tacgtcgggt tagatgttca caaagaatcg attactgtcg cttatgctat
      181 caattcagaa cctgttgaac tgatgggtaa aattggcaca tcacctactg atattcagaa
      241 tctttgtaaa cgtctcaggt caaagtcatc gcaggtcagt atcgtttatg aagcggggcc
      301 ctgtggttat ggactttatc gtcggctggt gaaatccggt tttgactgca tggtctgcgc
      361 cccctcactt atcccgaaaa aaccggggga gcgggttaaa accgatcgcc gtgatgccat
      421 cagacttgtg cgttcactgc gtgcaggaga tctttctgct gtctacgtac ccggcattga
      481 agatgaggca ttccgggatt tggcccgggc atgggcatct gcccgcgatg atttacggca
      541 tgcaaggcaa cgtctgaaat cgtttcttct ggttcatggg gtccattatg tcgggcgagc
      601 agattggggc cctgcacacc gacgctggct cagcaaatac tcattcgaaa gtccctggcg
      661 acaattagct tttgacgaac accgtcgtac aatagaagac cggcaggcac aatgtgaacg
      721 gctggaatcc gccctgaagg aggccgttac cgaatggagg ctgtatcc
//
LOCUS       DADKRT010000389          766 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.394, whole genome shotgun sequence.
ACCESSION   DADKRT010000389 DADKRT010000000
VERSION     DADKRT010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.394"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..279
                     /locus_tag="JQ356_004378"
     CDS             <1..279
                     /locus_tag="JQ356_004378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY4624230.1"
                     /translation="SLNVYCRNGQVEIDNNIGENALRSVAVGRKNYLFFGSDNGGESA
                     AIIYSLLVTCKLNGVEPEDWLREVIVKLNDWPSNRVHELLPWNFSAVK"
     gene            complement(524..>766)
                     /locus_tag="JQ356_004379"
     CDS             complement(524..>766)
                     /locus_tag="JQ356_004379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624231.1"
                     /translation="ELKNNGIKAVIPRKSNEKMASDGRAQLDRDAYRNRNVVERCFGR
                     LKEYRRIATRYDKTARNYLAMVKLGCIRLFYQRLRN"
BASE COUNT          178 a          182 c          194 g          212 t
ORIGIN      
        1 agcctgaacg tgtactgtcg taatggccag gtggaaatcg acaacaacat cggtgaaaac
       61 gcgctgcgat cggtggcggt tggaagaaaa aattatctct tcttcggttc tgacaacggt
      121 ggagaaagcg cggcgattat ctacagtctg ctggtcacct gcaaactgaa cggagtggag
      181 ccggaggact ggttgcgcga agtgatcgtg aagctcaatg actggccgtc gaaccgagtg
      241 catgaactgc tgccctggaa cttctcagct gtaaaataat ccttccgcta cgtacttctc
      301 tgggcgctta ccactcaacg gcatcgtcaa aattatcaaa gcgcagaaca tagatttatc
      361 atgtgtttta tggatggctt tctccatcag gcatcgttcg tcacgggaaa ttggtgctat
      421 gatcggcatt gatcagtccg gttggtgatt tgttttgatt tggcgattga tcagatcgca
      481 caatccgggc tgagttccct ctaagtgatc taggttgtgt cccttaatta cgtaagcgtt
      541 gataaaagag tcggatgcag cccagtttca ccatcgccag gtaatttctc gccgttttgt
      601 cgtaacgcgt ggcgatgcgg cgatattctt tcagccgccc aaagcaccgt tcaacgacat
      661 tacgattgcg gtacgcatca cgatcaagct gtgcacgtcc atccgatgcc attttctcat
      721 ttgactttcg ggggattact gcctttatac cgttattttt cagctc
//
LOCUS       DADKRT010000390          743 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.395, whole genome shotgun sequence.
ACCESSION   DADKRT010000390 DADKRT010000000
VERSION     DADKRT010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.395"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..349
                     /locus_tag="JQ356_004380"
     CDS             <1..349
                     /locus_tag="JQ356_004380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624232.1"
                     /translation="EGGEGHLSSFFVQTDKASINVAYHHTVNQQKELGTFGAFDHDWH
                     TLAFKFKGSNSINVTPVLDGVDGQAFDLVKWANTANGLNRFVITDITGSAETYPVLID
                     TVEVKANKAGAAA"
     gene            489..671
                     /locus_tag="JQ356_004381"
     CDS             489..671
                     /locus_tag="JQ356_004381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1378 family protein"
                     /protein_id="HAY4624233.1"
                     /translation="MTFIHQVMLYFCTAVCVLYLLSGGYRAVRDFWCRQIDKRAAEKI
                     SASQSAGSKPEEPVTP"
BASE COUNT          219 a          149 c          186 g          189 t
ORIGIN      
        1 tgagggtggt gaaggccatc tgagttcttt ctttgtccag acagataaag ccagtattaa
       61 tgttgcatac catcatacag ttaatcaaca aaaagaactt ggcacgtttg gcgcattcga
      121 ccatgactgg catacgcttg catttaaatt taagggcagt aacagcatta atgttactcc
      181 ggtgcttgat ggtgtggatg gacaggcgtt tgacctggtg aaatgggcca atactgctaa
      241 tggactcaac aggtttgtca ttacggatat tacaggtagt gcagaaacct accctgtact
      301 tattgatacg gtggaagtta aagcaaacaa agctggagca gccgcataat tgctaaaaaa
      361 agccgccagc ggcaggaatg gaagctggcg gaggtaatcc caatggagaa tgtaaagaaa
      421 agatgctttc gtacattggt tttttaaatg aaaacaattc tcattgtcaa ccataacggt
      481 aagaaattat gacatttatt catcaggtga tgctgtactt ctgtacggcg gtctgtgtgc
      541 tgtatcttct ttcgggtggg tacagggctg tgcgcgattt ctggtgcagg cagattgata
      601 aaagggccgc tgagaaaatc agcgccagtc agtcagccgg aagcaaaccc gaagaacccg
      661 ttactcctta acaacccctt tcagcgagaa aatcccatgt cagaaatcac atccctggtc
      721 actgcagagg cagtgaagga agt
//
LOCUS       DADKRT010000391          733 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.396, whole genome shotgun sequence.
ACCESSION   DADKRT010000391 DADKRT010000000
VERSION     DADKRT010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.396"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>733
                     /locus_tag="JQ356_004382"
     CDS             <1..>733
                     /locus_tag="JQ356_004382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MolR family transcriptional regulator"
                     /protein_id="HAY4624234.1"
                     /translation="RGDYSALISEFKTFWHSYQREWQLYMLAALPIEKTAQAWNVLSK
                     EPHVGVEFVMTHLQLAGLQGFIHSFSRYPQEALPVAQYFAAIELAPLIARAFNKLKTL
                     RENARTWLLKYPEHAITGLLASALDKAGEAQDNARAALRMLTENGHQPLLQEIARRYN
                     QPEVTDAVNALLALDPLDNHPTKIPTLPAFYQPSLWTRPVLKANAQSLPDSALLHLGE
                     MLRFPQEEALYPGLLQVKDACTADSL"
BASE COUNT          182 a          222 c          166 g          163 t
ORIGIN      
        1 agaggggaga ttattctgcg ctgatcagcg aatttaaaac cttctggcac tcctatcaac
       61 gggaatggca gctttacatg ttagccgccc tgcctatcga aaaaacagcg caggcgtgga
      121 atgtcctcag taaagagcca cacgtcggtg tcgagtttgt catgacgcac ctgcaactcg
      181 ctgggttaca gggttttatt cactcctttt cacgctatcc acaagaagct ctacctgtag
      241 cacaatattt tgcggctatc gaattagcgc cactgattgc ccgtgccttc aacaaactca
      301 aaacgctacg cgaaaacgcc cgcacctggc tgttgaaata cccggaacat gccattaccg
      361 gcctgctggc ttcggcgctc gacaaagccg gtgaagcaca ggataacgcc cgcgctgcct
      421 tgcgtatgct taccgaaaat ggtcatcagc cattactgca agaaatcgcc cggcgttata
      481 accagccgga agtaaccgac gcggtgaacg ctctgcttgc gctcgatccc ttagataatc
      541 acccaacaaa aatccccact cttccggcct tttatcagcc atcgctctgg acgcgcccgg
      601 tattaaaagc aaacgcccaa tcactgccag atagtgccct cctccacctc ggcgaaatgc
      661 tccgcttccc tcaggaagag gctctgtatc cgggattatt gcaggtgaaa gatgcctgta
      721 ccgccgactc act
//
LOCUS       DADKRT010000392          731 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.397, whole genome shotgun sequence.
ACCESSION   DADKRT010000392 DADKRT010000000
VERSION     DADKRT010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.397"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..>731)
                     /gene="ecpD"
                     /locus_tag="JQ356_004383"
     CDS             complement(<1..>731)
                     /gene="ecpD"
                     /locus_tag="JQ356_004383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial adhesin EcpD"
                     /protein_id="HAY4624235.1"
                     /translation="KFDMWLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGF
                     YGATVTSGGAKWMHGMLSDAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQ
                     ASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSLSGLS
                     CKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYT
                     FNEMKSADSIYVFFSSNFFKQMVNL"
BASE COUNT          165 a          185 c          197 g          184 t
ORIGIN      
        1 cgaggttcac catctgctta aagaagttgc tcgagaagaa aacatagatc gagtctgcgc
       61 tcttcatctc gttgaaggtg tagtaatagg cggtattgct caccggtttc catgaactgc
      121 cattcagact gaactgcata tcgtacgccc cgacggccga ggctaacgac gagttggcga
      181 tcgccgggaa tatatggatt gaggtgttgc tgagtccgtt tgtttgcagg gtatagttga
      241 ccatcttaca acttaatcct gaaaggctgc cgatggtctg tgtccggcag tcggcgttcc
      301 cttcgcccag ggtcggcacc ccgtcgctgt tgataaatac ctccgccagc gagtgggtat
      361 ttattaaccg aagatttgct gctttcgtat gggtgacatt gcgaacatac cagttgccgg
      421 aggcctgatc cttacaacgc gcgccgctgc tggcgtcata gttcacagag gtctgacagg
      481 cattgatggt cattgtaaag ctgctgccga cgggcatttg ttgcatatac tggtaaaacg
      541 cgtctgacaa catgccgtgc atccacttcg cgccgccgct ggtcaccgtc gcgccataaa
      601 atccactggc gtcggtggtt tgcggcagga taagactggt ggtcatatta caccctgcgt
      661 accagttgat gcagcgtaag ccagttaaag gagatgaaac cggcgaattt tccagccaca
      721 tatcaaactt c
//
LOCUS       DADKRT010000393          724 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.398, whole genome shotgun sequence.
ACCESSION   DADKRT010000393 DADKRT010000000
VERSION     DADKRT010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.398"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..587
                     /locus_tag="JQ356_004384"
     CDS             <1..587
                     /locus_tag="JQ356_004384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309933.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY4624236.1"
                     /translation="NQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQ
                     AMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNA
                     VIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSV
                     AALITDIIDKPEKHIGENIGINQPVTDGDKPLFM"
BASE COUNT          237 a          142 c          148 g          197 t
ORIGIN      
        1 ttaatcaact ggcagataaa caaaccatta aacaaacttt atttgcccgt cagccagcaa
       61 aaatccacaa accctatcca actaatagca agattattat gggagatgta ctgaatcatg
      121 cagcactgaa gcaggccatg cagggacagg acgttgtgta tgccaacctt acgggggaag
      181 atttagatat tcaggcaaat tcagtgatcg ctgcgatgaa agcctgtgat gttaaacgtc
      241 tgatctttgt tctttccctc ggtatttatg atgaagttcc aggaaaattt ggcgaatgga
      301 ataatgcagt tattggtgag cccctaaaac cattccgcag ggctgcggat gcaattgagg
      361 cttctggact ggaatataca attcttcgcc ctgcctggct gactgatgaa gatattattg
      421 attatgagct tacctcacgc aatgaaccat tcaaaggtac gatcgtatca cgtaagagtg
      481 tcgcagcatt aatcacagat atcatcgata aacctgagaa acacattggt gagaatatag
      541 gtatcaatca acccgtgact gatggtgaca agccattatt catgtaaatc aattacatag
      601 ttaccatcgt aatgtactat gtgcagtacg atttattaaa cttattaagg tgaactgatc
      661 aatccgatgc gattaacatg tgtagaacca gtaagaataa aatacgccat gtatataaca
      721 ttac
//
LOCUS       DADKRT010000394          673 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.399, whole genome shotgun sequence.
ACCESSION   DADKRT010000394 DADKRT010000000
VERSION     DADKRT010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.399"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            193..462
                     /locus_tag="JQ356_004385"
     CDS             193..462
                     /locus_tag="JQ356_004385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624237.1"
                     /translation="MAQVNMSVRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNSWFRDQVAAGRQQLECGDVLPHDMVESSAAAWRDEMSRKIADK"
     gene            459..586
                     /locus_tag="JQ356_004386"
                     /pseudo
     CDS             459..586
                     /locus_tag="JQ356_004386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001553778.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT          168 a          154 c          197 g          154 t
ORIGIN      
        1 ctgtcagcgc cagtgatagg acaggtgaaa cctgtcaata cgtaccggct tacgccgggc
       61 ttcggcggtt ttactcctct gccatatgca acaacggagt gccgccttac atgccgctgg
      121 cgcggcatat cctggtgacg atatctgaac agttatatac tgtgtatata cgtggtaatg
      181 acgaggtggc aaatggcaca ggttaatatg agtgtaagaa tcgacgcaga actgaaggat
      241 gcttttatgg ccgctgcaaa aagcatggac cgtaatggct ctcagttaat ccgggatttt
      301 atgcgccaga ccgttgaacg gcagcacaat tcttggttcc gtgaccaggt tgcggcaggc
      361 cgtcagcaac tcgaatgcgg tgatgtgctt ccccatgaca tggtcgaatc ctctgctgct
      421 gcatggcggg atgaaatgag caggaagatt gctgataaat gatggagatg ttctggacca
      481 tgctggccat ccaggacagg aagcgcattc gtagtacatt gcggagcaga acctgatggc
      541 cgccattgaa ccggacgaac ggattggtta ttcagccagc agcctggcag ggcagccgta
      601 taaaggccgc aacggtcgtg tggaaggaac atctggacca cacaaggtag cgtgtaacgt
      661 tattttgtgt gaa
//
LOCUS       DADKRT010000395          670 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.400, whole genome shotgun sequence.
ACCESSION   DADKRT010000395 DADKRT010000000
VERSION     DADKRT010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.400"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(12..88)
                     /locus_tag="JQ356_004387"
     tRNA            complement(12..88)
                     /locus_tag="JQ356_004387"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(52..54),aa:Arg,seq:tcg)
     gene            complement(96..171)
                     /locus_tag="JQ356_004388"
     tRNA            complement(96..171)
                     /locus_tag="JQ356_004388"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(136..138),aa:Ile,seq:cat)
     gene            complement(221..569)
                     /locus_tag="JQ356_004389"
                     /pseudo
     CDS             complement(221..569)
                     /locus_tag="JQ356_004389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000382062.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
BASE COUNT          147 a          193 c          161 g          169 t
ORIGIN      
        1 gatgcagata atggaccgcc atcggggact tgaaccccgc gcagccagct tcgaaggctg
       61 gcgctctttc ctgatgagct aatggcggta tgtgatggtg gcccttgctg gatttgaacc
      121 agcgacctgg cgattatgag tcgctcgctc tcaccactga gctaaagggc cgggagcaga
      181 ataataatgg tgcgtaatta attctgcaat ctcatccgtt tcaaacgatt aaatcctgaa
      241 cttccctgac tgtctgctca aaacgtccgg tctccagttc aacgccaatc gcacgacgcc
      301 cgagcgccag tgcagctttt accgttgaac ctgagcccat aaaaaaaatc tgcaaccagg
      361 tctcccggac gactgcttgc gctgattatc tgctgcagca tttctgccgg tttttcgcac
      421 ggatgtttcc cgggatagaa ctgcaccggt ttatgtgtcc acacatccgt gtacggcacc
      481 tgcgccgtca caccaaaata ccgccgcaga tgcttatatt cactctgcag ctccacatac
      541 tgccggttca gtgacgtata cgtatccacc agctggtggt ggggcttttc cagttcaccg
      601 cgctgatgtt tctcttctgc cacccgggca aacagcgact gtaatttcag ataatcgctt
      661 tcgttcggta
//
LOCUS       DADKRT010000396          661 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.401, whole genome shotgun sequence.
ACCESSION   DADKRT010000396 DADKRT010000000
VERSION     DADKRT010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.401"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(95..661)
                     /locus_tag="JQ356_004390"
                     /pseudo
     CDS             complement(95..661)
                     /locus_tag="JQ356_004390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
BASE COUNT          163 a          156 c          148 g          194 t
ORIGIN      
        1 aggtggaaaa ccgcgcctta tatccccgcc ctgaaggatg gggttttacg gcgcaccgga
       61 taaaaagcgc catctaacga tggcgcgtct ggaactactt tttgttaacg tcaaacatgg
      121 tggcatcggt cgccatgtca tcaataactt gtttaatatt ttcgaaagcc attggcgtac
      181 tttcgttatt caggtcttta ccttagccct gacgaacgac tttgataacc ggtttattag
      241 tcgctgcatc aatcagctca ccttcaaaat agaggcgagt atccatggta cggtgacctg
      301 tagccatttg cgtccccgca accactaatg caacaggaac cacttcatag aattgcagcc
      361 cttctttgct ggtatctaca ccggtaatgg ccccacggaa aatcagacta cgcggcccag
      421 cggtggtaac cagtggttta cgctgcgcta tcgcttcttt catttcggtg ttggtatagt
      481 tcaaaatttt atccagaact ttctgcccta cctgggtaga aggttttggc accggataat
      541 aagtgattgg gttccagacg atgctgtcat atttgctttg atcaaaactc gggtctaccc
      601 aacgtaaaac aggtttacct gttgctgagg ttgtttcttt taaatcagag taattgttta
      661 a
//
LOCUS       DADKRT010000397          659 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.402, whole genome shotgun sequence.
ACCESSION   DADKRT010000397 DADKRT010000000
VERSION     DADKRT010000397.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.402"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            215..574
                     /locus_tag="JQ356_004391"
     CDS             215..574
                     /locus_tag="JQ356_004391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001331208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1889 family protein"
                     /protein_id="HAY4624238.1"
                     /translation="MQIKVIYSLIDNMVNFKDKNMPAVIDKALDFIGAMDVSAPTPSS
                     MNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMEFGERTVIK
                     NPEYFSTYMQEELKALV"
BASE COUNT          212 a          128 c          131 g          188 t
ORIGIN      
        1 aactatataa ataaacataa ccatgccgtt gtgttcgccc ttcgattagc acctctggtt
       61 ttctttctta gctgaacaat ctggttatag cgtgcggact gaccgttaat tttctccatc
      121 ttactggata acacaccatg agctgctacc tttaaaacac ctgaatgtca acaggttaac
      181 tcgtgccata tcgttataat ccctttgata ttagatgcaa attaaggtca tatatagcct
      241 tatcgataac atggttaatt ttaaggataa gaatatgcct gctgtaatag ataaagccct
      301 ggatttcatt ggtgccatgg atgtatcagc gccaacacca agttcgatga atgaaagcac
      361 agcgaaggga atctttaaat atttaaaaga actgggagta cccgcgagtg ccgctgatat
      421 tacggcgcga gctgaccagg aaggctggaa ccctgggttc acggaaaaaa tggttggatg
      481 ggcaaaaaaa atggagtttg gtgaacgcac tgtaattaaa aatcctgaat acttttcaac
      541 atatatgcag gaagaactaa aagcactggt ctgagtttaa tttatatcag cataaatggg
      601 tcaggacgct tttaatcaca tataaaaagc gtcctttttc tcacaatcaa ataatcatc
//
LOCUS       DADKRT010000398          658 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.403, whole genome shotgun sequence.
ACCESSION   DADKRT010000398 DADKRT010000000
VERSION     DADKRT010000398.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.403"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>658
                     /locus_tag="JQ356_004392"
     rRNA            <1..>658
                     /locus_tag="JQ356_004392"
                     /product="16S ribosomal RNA"
BASE COUNT          156 a          151 c          215 g          136 t
ORIGIN      
        1 actccgtgcc agcagccgcg gtaatacgga gggtgcaagc gttaatcgga attactgggc
       61 gtaaagcgca cgcaggcggt ttgttaagtc agatgtgaaa tccccgggct caacctggga
      121 actgcatctg atactggcaa gcttgagtct cgtagagggg ggtagaattc caggtgtagc
      181 ggtgaaatgc gtagagatct ggaggaatac cggtggcgaa ggcggccccc tggacgaaga
      241 ctgacgctca ggtgcgaaag cgtggggagc aaacaggatt agataccctg gtagtccacg
      301 ccgtaaacga tgtcgacttg gaggttgtgc ccttgaggcg tggcttccgg agctaacgcg
      361 ttaagtcgac cgcctgggga gtacggccgc aaggttaaaa ctcaaatgaa ttgacggggg
      421 cccgcacaag cggtggagca tgtggtttaa ttcgatgcaa cgcgaagaac cttacctggt
      481 cttgacatcc acggaagttt tcagagatga gaatgtgcct tcgggaaccg tgagacaggt
      541 gctgcatggc tgtcgtcagc tcgtgttgtg aaatgttggg ttaagtcccg caacgagcgc
      601 aacccttatc ctttgttgcc agcggtccgg ccgggaactc aaaggagact gccagtga
//
LOCUS       DADKRT010000399          656 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.404, whole genome shotgun sequence.
ACCESSION   DADKRT010000399 DADKRT010000000
VERSION     DADKRT010000399.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.404"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(64..594)
                     /locus_tag="JQ356_004393"
     CDS             complement(64..594)
                     /locus_tag="JQ356_004393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY4624239.1"
                     /translation="MSITGVNIGRLFREGFSNYDPIGALNAMASQRTKEARGGELQIN
                     ELLPASLDAAKAHGLTERDVYEATDYYKTPRGQQPGGATKMLFSHAQKTLAWDAFAFT
                     EVLLTQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQLVSLPDFSHYELYDKPEAV
                     QEALEKVIPFFNPHLG"
BASE COUNT          166 a          177 c          137 g          176 t
ORIGIN      
        1 ggcgggctat ctgaccgcca gcaccaagaa tcagtacatt tttcataata tttctcatga
       61 aacttatccc agatgggggt tgaaaaaagg aataactttt tccagcgcct cctgaactgc
      121 ttccggtttg tcatacagtt cataatgtga gaaatcgggt aatgaaacta actgacgatc
      181 ctgcgaaacc atcgcccggc catagacttc cagtccatca cgataagcac cgaaggcacc
      241 gactttttca ccaacgacta ccatcaccgg ctgagtcagt aacacttcag taaatgcgaa
      301 ggcatcccag gccagcgttt tctgtgcatg tgagaacaac atttttgtcg cacctcccgg
      361 ttgttgcccg cgtggtgttt tatagtagtc agttgcttca taaacatcgc gttcggtcag
      421 tccatgggct tttgctgcat ccaggctggc gggaagtaat tcgttgatct gtaattctcc
      481 accacgagcc tctttggttc gttgcgacgc cattgcattc aatgcgccaa tcggatcgta
      541 attgctgaaa ccttcccgaa aaagacgccc gatattaaca cccgtaatac tcactactgc
      601 tttaattcgt ttttctgtca gcgcggcatt aatggcatag tcaccacccc cacaca
//
LOCUS       DADKRT010000400          655 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.405, whole genome shotgun sequence.
ACCESSION   DADKRT010000400 DADKRT010000000
VERSION     DADKRT010000400.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.405"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            17..>655
                     /locus_tag="JQ356_004394"
     CDS             17..>655
                     /locus_tag="JQ356_004394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HAY4624240.1"
                     /translation="MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLI
                     SLAAICLALFTTAFIIISQLTRGVNTFYNILFPIIGYAGSIITMIWGWALLAGNDVMA
                     DEFVAGYVIFGIGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLI
                     AVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQ"
BASE COUNT          137 a          146 c          161 g          211 t
ORIGIN      
        1 acctgaggag tttaaagtga acatatatat cgggtggctt ttcaaattaa tccctttgat
       61 tatgggctta atttgtatcg cgttaggtgg ctttgtgctg gaaagttcag ggcaaagcga
      121 gtatttcgtc gcgggtcatg tgctgatttc tctggcagcc atatgcctgg cattattcac
      181 taccgcattt attatcattt cgcagctcac gcgcggcgtt aatacgtttt acaatatatt
      241 gttccccatt attggctatg cagggtcaat tatcaccatg atatggggtt gggcactgtt
      301 agcaggcaat gatgtgatgg cagacgagtt tgtcgccggc tatgttattt tcggcattgg
      361 tatgattgcc gcatgtgtat cgacggtggc agcgtcgtcc ggtcactttc tgctcattcc
      421 caaaaatgca gcggggagca agagcgacgg aacaccggta caggcttatt cttcattaat
      481 cggtaactgc ctcattgccg ttcccgtttt actcaccctg ctcggtttca tttggtctat
      541 tacgctgtta cgtagtgctg acataactcc gcattatgtc gcgggtcacg tattgcttgg
      601 gttaaccgca atctgtgcct gtctaattgg ccttgttgcc acaattgtcc atcaa
//
LOCUS       DADKRT010000401          640 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.406, whole genome shotgun sequence.
ACCESSION   DADKRT010000401 DADKRT010000000
VERSION     DADKRT010000401.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.406"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>640
                     /locus_tag="JQ356_004395"
     CDS             <1..>640
                     /locus_tag="JQ356_004395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISSbo1 family transposase"
                     /protein_id="HAY4624241.1"
                     /translation="LRDIGVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSCGS
                     RACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVE
                     NLLYAARKRGQEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMR
                     SRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSKK"
BASE COUNT          149 a          161 c          199 g          131 t
ORIGIN      
        1 ctgcgcgata tcggggttga ggctgtcaca aaaatgctgg cctgcggcac gcggatactg
       61 ggagtgaagg aatacatctg cgataaacct gagtgccccc acgtcagata cgtcactaac
      121 tcatgcggca gccgtgcctg cccgtcctgc ggaaaaaagg ccacagacct gtggatagcg
      181 acacagctga atcgtcttcc tgactgcgac tgggtacacc tggtcttcac cctgccggac
      241 acgctgtggc cggtgttcga aagcaaccgg tggctgctga atgacgtgtg ccgtctggcg
      301 gtggagaatc tgctgtatgc cgcccggaaa cgggggcagg aacccggtat cttctgcgcc
      361 atccacacgt atggccgtcg tctcaactgg catccgcatg tacatgtgtc tgtaacctgt
      421 ggaggtctga ataagcatgg tcagtggaaa aagctgagct tcctgaaaga cgcgatgcgt
      481 tcacggtgga tgtggaatat gcggcagctg cttctgaaag cgtggtcaga ggggctggcg
      541 atgccggagt cgttgtcaca tatcacgacg gaatcacagt ggagaagcct ggtgctgaaa
      601 gccggaggaa aatactggca tgtgtacatg tcgaaaaaaa
//
LOCUS       DADKRT010000402          636 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.407, whole genome shotgun sequence.
ACCESSION   DADKRT010000402 DADKRT010000000
VERSION     DADKRT010000402.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.407"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            11..565
                     /locus_tag="JQ356_004396"
     CDS             11..565
                     /locus_tag="JQ356_004396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1133 family protein"
                     /protein_id="HAY4624242.1"
                     /translation="MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGGGKTGN
                     MFNQLLASKKLTKTAINEALRRMKKAGLNKSELEAFLRDMINGKQKSWLAHCTDAEAL
                     CIDRVISEVLAEHPGLISVLRQRYEGRGMTKRKMAELLNDAHPKWSLRTCERRIEHWL
                     KVAEFILYKPMVMAFGIEKKVIAF"
BASE COUNT          187 a          114 c          181 g          154 t
ORIGIN      
        1 aaggttattt atgatttacc caacaaatac aggcaaaagc ggggaacacc ttcgtctcac
       61 cacgctggaa agtgtctgga ttcagggaaa actgcgcatg tgggggcgct ggtcgtatat
      121 tggcggcggt aagacgggga atatgttcaa ccagttgttg gcctctaaaa agctgacaaa
      181 aacggcaatt aacgaggcgc tccggaggat gaaaaaagca ggtctgaaca agtctgaact
      241 tgaggctttt ttgcgggata tgattaacgg taagcaaaag agctggctgg cgcattgtac
      301 tgatgcagag gcgttatgta ttgatcgggt cataagtgag gtgctggcag agcatccagg
      361 attgattagc gtccttcggc aacggtatga ggggcggggg atgaccaaac gcaaaatggc
      421 tgaactgctg aatgatgcac acccgaaatg gagtttaaga acctgtgaaa gacgcattga
      481 gcattggcta aaggtggcag aatttatttt gtacaaacca atggttatgg cttttggtat
      541 agagaaaaaa gttattgctt tttgacgtaa aaactgcttc aattcttgta cgcttcgcaa
      601 agctgtaccg cgaggcgaat agcagacatg gacatt
//
LOCUS       DADKRT010000403          631 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.408, whole genome shotgun sequence.
ACCESSION   DADKRT010000403 DADKRT010000000
VERSION     DADKRT010000403.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.408"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..76)
                     /locus_tag="JQ356_004397"
     tRNA            complement(1..76)
                     /locus_tag="JQ356_004397"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(41..43),aa:Ile,seq:cat)
     gene            complement(117..>631)
                     /locus_tag="JQ356_004398"
     CDS             complement(117..>631)
                     /locus_tag="JQ356_004398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HAY4624243.1"
                     /translation="ATGKKNMVSHWFSASQWQLPNESDYLKLQALFARVAEEKHRRGE
                     LEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPGKHP
                     CEKPAEMLQQIISASSRPGDLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVR
                     EVQDLVSQNG"
BASE COUNT          138 a          194 c          141 g          158 t
ORIGIN      
        1 tggtggccct tgctggattt gaaccagcga cctggcgatt atgagtcgct cgctctcacc
       61 actgagctaa agggccggga gccgcataat aacgacgcgt aattaattct tcaatatcat
      121 ccgttctggc tgactaaatc ctgtacttcc cgaaccgtct gctcaaaacg ttcagtctcc
      181 agctcaacgc caattgcacg acgcccgagc gccagtgccg ctttcactgt cgaacccgac
      241 cccatgaaaa aatctgcaat caggtcaccc ggacgactgc tagcgctgat tatctgctgc
      301 agcatttctg ccggtttttc gcacggatgt ttcccgggat agaactgcac cggtttatgc
      361 gtccacacat cggtatacgg cacctgcacc gtcacgccaa aataccgccg cagatgttta
      421 tattcactca gcagctccgc atactgccgg ttcagtgagg tatacgtatc caccagctgg
      481 tggtggagct tttccagttc accacgccga tgcttctctt ctgccacccg ggcaaacagc
      541 gcctgtaatt tcagataatc gctttcattc ggcaactgcc actgactggc actgaaccag
      601 tgcgacacca tgtttttctt tcctgtggca t
//
LOCUS       DADKRT010000404          626 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.409, whole genome shotgun sequence.
ACCESSION   DADKRT010000404 DADKRT010000000
VERSION     DADKRT010000404.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.409"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            2..238
                     /locus_tag="JQ356_004399"
     CDS             2..238
                     /locus_tag="JQ356_004399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000896126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF417 family protein"
                     /protein_id="HAY4624244.1"
                     /translation="MAFTTPLVTLSFLITTPEAWVSALGDAHYGFPYLSGAGRLVLKD
                     TLMLAGAVMIMADSAREILKQRSNESSSTLKTEY"
     gene            complement(398..>626)
                     /locus_tag="JQ356_004400"
     CDS             complement(398..>626)
                     /locus_tag="JQ356_004400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308365.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HAY4624245.1"
                     /translation="ISQVILRWNIQRGVVVIPKSTHQQRIEENFAIWDFSLTEKEMAQ
                     ISSLDLGYVGESVKHFNPEFVRGCLAVKIHD"
BASE COUNT          181 a          140 c          122 g          183 t
ORIGIN      
        1 gatggcattt accacgccgc tggtaacact ctcattttta atcaccaccc cggaggcatg
       61 ggtatccgca ttgggtgacg ctcattatgg tttcccttat ttatccggtg ctggtcgctt
      121 ggtattgaaa gatactctga tgctggcagg tgctgtcatg ataatggcag attcggcgcg
      181 ggaaattctt aaacaacgca gtaatgaatc cagttcaacg ttaaaaactg aatattgata
      241 atccgaacac tgtctgttgt tcactttttc aggcgtcagg ccccctttct gatgatgaag
      301 actgacgcca tattaccgga gatatgacag agtgaagatc aatatcactc ccctgttaaa
      361 agattcttgt cgtctcaggt aaaatatatg attaatatca atcatgtatt tttacagcaa
      421 gacaaccacg aacaaattca ggattaaaat gttttaccga ctccccaaca taacccaaat
      481 caagcgaact aatttgtgcc atttctttct ctgtcagtga gaaatcccag atagcaaaat
      541 tttcttcgat acgctgttga tgtgtcgatt tcggaataac gaccactccc cgttgaatat
      601 tccaacgcag aatgacttga gaaatc
//
LOCUS       DADKRT010000405          600 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.410, whole genome shotgun sequence.
ACCESSION   DADKRT010000405 DADKRT010000000
VERSION     DADKRT010000405.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.410"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..221
                     /locus_tag="JQ356_004401"
                     /pseudo
     CDS             1..221
                     /locus_tag="JQ356_004401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001385987.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
     gene            160..>600
                     /locus_tag="JQ356_004402"
     CDS             160..>600
                     /locus_tag="JQ356_004402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY4624246.1"
                     /translation="MVDFTRDRLHRETLRRFGRYELSTAYTPAGQLQSQHLNSLQYDR
                     DYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDP
                     ELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIR"
BASE COUNT          134 a          214 c          167 g           85 t
ORIGIN      
        1 cacccggaga cggaagcact gctctggcag catgagacca gacatgcgta caacgcgcag
       61 ggactggcga accgctgtat accggacagc ctgcccgccg tggaatggct gacctacggc
      121 agcggctggc tggcaggtat gaagctcggc gacacaccgc tggtggattt cacccgcgac
      181 cgcctgcacc gggaaacgct gcgccgcttc ggccgttatg aactctccac cgcttacacc
      241 cctgccgggc agttacagag ccagcacctg aacagcctgc agtatgaccg cgattacacc
      301 tggaacgaca acggcgaact catccgcatc agcagcccgc gccagacccg gagttacagc
      361 tacagcacca ccggcaggct gaccggcgtt cacaccaccg cagcgaacct tgatatccgc
      421 atcccgtatg ccacagaccc ggcaggtaac cgcctgcccg acccggagct gcacccggac
      481 agcaccctca gcatgtggcc ggataaccgt atcgcccgtg acgcgcacta tctttaccgg
      541 tatgaccgtc acggcaggct gacagagaaa accgacctca tcccggaagg gggtatccgc
//
LOCUS       DADKRT010000406          597 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.411, whole genome shotgun sequence.
ACCESSION   DADKRT010000406 DADKRT010000000
VERSION     DADKRT010000406.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.411"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
BASE COUNT          222 a           87 c          101 g          187 t
ORIGIN      
        1 gtgtagtaat aaatcagccc taaatgggta aaatataaaa ctaatggatt acatctgatt
       61 tcaatctagc cattacaaaa cttaaatcaa gtgttaaata tgtaactaaa tgtaacttgt
      121 tatattaaaa tattaacctt aaggttttat taagtttaga aatgatagaa aagttgtaca
      181 tttggttttt attgcacaat tttaaaaaat catacaaatg gtgataactt actaataata
      241 catataaaaa atatttcggt gtagtccttt cgtcatgtaa aacgttcttg ttttttctcc
      301 gcacctccgt ggacaaattt ttactccaaa aagacgaggt ttgtcacggc ttgtgcgcaa
      361 gacatatcgc agcaatcagc gacgggcaag aaaaatgact gtctggtgat ttttgatagc
      421 ggaaaacgga gatttaaaag aaaacaaaat attttttgcg tagataacag cgtatttacg
      481 tgggttttaa tactttggta tgaacaaaaa aagaaaaata caacgcgcgg gtgagttatt
      541 aaaaatattt ccgcagacat actttccatc ataacgcagc gttaacaaaa tacaggt
//
LOCUS       DADKRT010000407          589 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.412, whole genome shotgun sequence.
ACCESSION   DADKRT010000407 DADKRT010000000
VERSION     DADKRT010000407.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.412"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
BASE COUNT          190 a           92 c          105 g          202 t
ORIGIN      
        1 atatttgtat ggtgcaatca tgatgagctt ctcagagaat aattctctat taccgggcaa
       61 aatcaggaac acaggaatta atatatattt aacatccccc ttacaaaggt gagtttatat
      121 cgagttattc cctaagttgt cgttacttat tccaattcgt tactataaat atggcaaaaa
      181 tattacaaca aacagcggtt aaaaaatttg gtgaagattt tttgtaataa tcctaattag
      241 ttatgggaat ttcgcttgat gtatctgcat aacaaaaaca atatgcgcca tttttgcatt
      301 actaataaga aaaagcaaaa aacatcgata ttcatttttg gtcaatgggt tttctggcct
      361 atcgttgtta ttgtgctact ggttatcatt ttcatcttgc cagcatattg gagcgtgatc
      421 aattttgatc agctgtgaag gtggctgatg tgtagtgata caaaaactta cgttatatca
      481 ctgctaatga gatatccgtc atctgaacac ttatgtcttt aattattctc gtggttcact
      541 ataggcaata agcacaaaag tgtaggatgt tacaagaatg attaggact
//
LOCUS       DADKRT010000408          585 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.413, whole genome shotgun sequence.
ACCESSION   DADKRT010000408 DADKRT010000000
VERSION     DADKRT010000408.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.413"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..554
                     /locus_tag="JQ356_004403"
     CDS             <1..554
                     /locus_tag="JQ356_004403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000647603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4624247.1"
                     /translation="TGIKQNGDGILDVYANGQHVFRFQNGVAIALKNIQAGNAKKFTL
                     SSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYG
                     NFDARYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADN
                     VNGVYYRPLQKLINGIWYNVASI"
BASE COUNT          172 a          118 c          144 g          151 t
ORIGIN      
        1 atacaggtat aaaacaaaac ggcgacggca ttctggatgt ttatgcgaat ggacagcatg
       61 tatttcgttt ccagaatggt gtggcgatag cgttaaaaaa tattcaggcc ggaaatgcta
      121 aaaaattcac gttatccagc gccaacaact ccacgaaaaa tgcagcgttt tatttgtggg
      181 gtaatccatc caggcctgtt gttgcagagc ttggtgatga ttccggctgg catttctaca
      241 gccagagaaa taccgatggt agtatcacat tcgctgtaaa cggacaggta attccgttaa
      301 attacggaaa cttcgatgcc cgctataaac atcgaactga gggggtacag gatgtgcggt
      361 atggttatga aatgtattac aaccctggca gcaacaccgt ttcatggacg tttcgctcac
      421 cttcgggaca cgggttgtca gggatatcga tatcggatac cggccgtaac tcagcggata
      481 acgtcaacgg tgtgtattac cgaccgctgc aaaaactgat taatggcatc tggtataacg
      541 tagcgagtat ttaacaatgt tgcatttaaa aaatattacg gcagg
//
LOCUS       DADKRT010000409          581 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.414, whole genome shotgun sequence.
ACCESSION   DADKRT010000409 DADKRT010000000
VERSION     DADKRT010000409.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.414"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..289
                     /locus_tag="JQ356_004404"
     CDS             <1..289
                     /locus_tag="JQ356_004404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624248.1"
                     /translation="FIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFN
                     TNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANALKF"
     gene            340..>581
                     /gene="chbA"
                     /locus_tag="JQ356_004405"
     CDS             340..>581
                     /gene="chbA"
                     /locus_tag="JQ356_004405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIA"
                     /protein_id="HAY4624249.1"
                     /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ
                     GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGK"
BASE COUNT          159 a          133 c          160 g          129 t
ORIGIN      
        1 gtttatcccg tttgtactgg tacaaccgat tctggcggca atcaccctcg cagcgtacta
       61 catgggcatt attcctccgg tgaccaatat tgcaccgtgg accatgccaa ccggtctggg
      121 agccttcttt aacaccaacg gtagcgtcgc tgcattgctg gtcgcactct tcaaccttgg
      181 tatcgcaacg ttaatttatc tgccctttgt tgtggtggct aacaaagcgc aaaacgcgat
      241 tgataaagaa gagagcgaag aagatatcgc taacgccctg aaattttaat cgatgccggt
      301 acggttaatc gtgccggtaa gaagagagag gaacgatgta tgatggatct cgataacatt
      361 cccgatacgc aaacagaagc tgaagagctg gaagaagtgg tgatggggct tatcatcaac
      421 tccggacaag cgcgcagcct ggcgtatgcg gcactgaaac aggcgaagca gggcgatttt
      481 gccgcagcaa aagccatgat ggatcagtca cggatggcat tgaatgaagc gcatctggta
      541 cagacgaaac tgattgaagg cgatgcgggc gaaggtaaga t
//
LOCUS       DADKRT010000410          574 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.415, whole genome shotgun sequence.
ACCESSION   DADKRT010000410 DADKRT010000000
VERSION     DADKRT010000410.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.415"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>574
                     /locus_tag="JQ356_004406"
     CDS             <1..>574
                     /locus_tag="JQ356_004406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MolR family transcriptional regulator"
                     /protein_id="HAY4624250.1"
                     /translation="RHINHPFALTLLIRVAGQTKRCHDRMTKAIAAFPHAAMAALTEL
                     LGQKEENSWRIMLMTMLISQPALAEQVLPWLSTPAVAVLKSYQQQLTQPSNHACADLL
                     PAVLVSPPWLSKKKKSVMPVLDLTPLPLESCCTLTETAEKEIHTRHRWHAHQIDIGQK
                     EDIQNYLARLGFNRWNNGQYMKASDAVVEL"
BASE COUNT          165 a          149 c          130 g          130 t
ORIGIN      
        1 tgcgtcatat caatcatccg ttcgcattga cactgcttat acgtgtagcc gggcaaacta
       61 aacgctgtca cgatcggatg acgaaagcca ttgctgcgtt cccacatgca gcaatggcgg
      121 cactgacgga acttcttggg caaaaagaag agaacagttg gcgcattatg ctaatgacaa
      181 tgcttatctc acaaccagca ctggcagaac aggtccttcc ctggctctcg acacccgcag
      241 ttgccgtact gaaatcatac cagcaacaac tgacacagcc ctcaaaccat gcctgcgccg
      301 atctactgcc tgccgtatta gtctcaccgc cctggctttc gaaaaagaaa aaatctgtaa
      361 tgccggtatt ggatttaacg ccattaccgt tggagtcatg ctgtacattg actgagacgg
      421 cagaaaaaga gattcataca aggcatcgct ggcacgcaca tcaaatagac atcggccaaa
      481 aagaggatat tcagaactac ctggcacgtc tgggtttcaa tcgctggaat aatggccagt
      541 atatgaaagc gtctgatgct gttgtagaac tctg
//
LOCUS       DADKRT010000411          558 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.416, whole genome shotgun sequence.
ACCESSION   DADKRT010000411 DADKRT010000000
VERSION     DADKRT010000411.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.416"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            2..>558
                     /gene="fimZ"
                     /locus_tag="JQ356_004407"
     CDS             2..>558
                     /gene="fimZ"
                     /locus_tag="JQ356_004407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001719888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimZ"
                     /protein_id="HAY4624251.1"
                     /translation="MIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP
                     VDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKC
                     NDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGL
                     SNKEIADKLLLSNKTVSAHKSNIYG"
BASE COUNT          180 a          102 c          106 g          170 t
ORIGIN      
        1 ggtgatcatt atggatactc atcctatcat cagaatgtct attgaagttc tgttgcaaaa
       61 aaacagtgaa ttgcagattg tcctgaaaac ggatgattac cgcataacca tcgattatct
      121 ccgaacccgt cctgttgatt taatcattat ggatatagac ttgcccggaa cagacggttt
      181 taccttcctg aaaaggatca aacaaatcca gagcacagtg aaagtgttat ttttatcatc
      241 gaaatcagaa tgcttttatg ctggcagagc gatacaagct ggtgctaacg gttttgtcag
      301 taaatgcaat gatcagaatg atatttttca tgccgttcag atgatcctct ccggatacac
      361 gttttttccc agcgaaacgc ttaactatat aaaaagcaat aaatgtagta cgaatagttc
      421 aacggtcact gtgctatcta atcgtgaagt gaccatatta cgttatctgg ttagcggatt
      481 atctaataaa gaaattgccg ataagttatt gcttagcaat aaaacagtta gtgcgcataa
      541 atctaatatt tatggcaa
//
LOCUS       DADKRT010000412          548 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.417, whole genome shotgun sequence.
ACCESSION   DADKRT010000412 DADKRT010000000
VERSION     DADKRT010000412.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.417"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..501
                     /locus_tag="JQ356_004408"
     CDS             <1..501
                     /locus_tag="JQ356_004408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624252.1"
                     /translation="ASFSDASNTMAHGRYYYGDHTNGIAWRLISQGEMYLTDNIIMAN
                     ALVYSHGEDVYSYESGAHSDFDSIRTVIRPAWIWNTWNQTGLELGWFKQQNKTQQGVT
                     LNESAYKTTLWHALKVGESILGSRPEIRFYGTYINILDNELSNFKFNENSKDEFMAGI
                     QAEVWW"
BASE COUNT          162 a           92 c          134 g          160 t
ORIGIN      
        1 gccagtttct cagatgccag taatacgatg gcgcatggtc gctattacta tggtgatcat
       61 accaatggga tcgcctggcg tttaatctct cagggcgaga tgtatcttac tgacaatatt
      121 attatggcta acgcgcttgt ctattctcac ggcgaagatg tttatagtta tgaaagtggt
      181 gctcatagtg attttgacag tattcgcact gtaataagac cggcctggat ctggaataca
      241 tggaatcaga cggggcttga attaggctgg tttaagcaac agaacaaaac tcagcagggt
      301 gtaacactaa atgaatcggc ttataaaacg acactctggc atgcattgaa agtgggtgaa
      361 agcattttag gttcacgacc agaaattcgc ttctatggaa cgtatatcaa tattctggat
      421 aacgaattat cgaattttaa gtttaatgag aacagcaaag acgagtttat ggccggcatc
      481 caggcggaag tctggtggta atctatttta gttaaggagt tgtgtatgtc aggatttaaa
      541 aaaggttt
//
LOCUS       DADKRT010000413          546 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.418, whole genome shotgun sequence.
ACCESSION   DADKRT010000413 DADKRT010000000
VERSION     DADKRT010000413.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.418"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(50..>546)
                     /locus_tag="JQ356_004409"
     CDS             complement(50..>546)
                     /locus_tag="JQ356_004409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000824385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY4624253.1"
                     /translation="SVDYNIEGFGFVGAYSKSDRTNEQAGDGYGDNAEVWSLAAKYDA
                     NNIYAAMMYGETRNMTVLANDHFANKTQNFEAVVQYQFDFGLRPSLGYVYSKGKDLYA
                     RDGHKGVDADRVNYIEVGTWYYFNKNMNVYTAYKFNLLDKDDAAITDAATDDQFAVGI
                     IYQF"
BASE COUNT          151 a          120 c          111 g          164 t
ORIGIN      
        1 tcaggctagt gttatgtttt acagtaacac gccgcggcgc gttggctgat tagaactggt
       61 agatgatacc aactgcaaac tggtcatcag ttgcggcatc ggtaatcgct gcatcgtctt
      121 tatccagcag gttaaatttg tatgctgtgt agacgttcat gttcttattg aagtagtacc
      181 aggtaccaac ttcgatataa tttacgcggt cagcatcaac acctttatgt ccatcacgag
      241 cataaagatc tttgcctttg gaatatacgt agcctaaaga cggacgtaaa ccgaagtcga
      301 actgatactg tacaacagct tcaaagtttt gggttttatt tgcaaaatga tcattagcca
      361 aaacggtcat gttgcgggtt tcaccgtaca tcattgctgc atagatatta tttgcatcat
      421 acttggctgc taatgaccac acttcagcgt tatcaccgta gccgtcacca gcttgttcat
      481 tagtacgatc agatttgcta tatgcaccta caaaaccaaa accttcgatg ttgtagtcta
      541 cagaca
//
LOCUS       DADKRT010000414          538 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.419, whole genome shotgun sequence.
ACCESSION   DADKRT010000414 DADKRT010000000
VERSION     DADKRT010000414.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.419"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            325..>538
                     /locus_tag="JQ356_004410"
     CDS             325..>538
                     /locus_tag="JQ356_004410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624254.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKTNPNKATKALQKNILRVTNSSS
                     SGISEKHLDHCANTVKNFLRKSIAAQS"
BASE COUNT          207 a           89 c           98 g          144 t
ORIGIN      
        1 gactctatca tcgccaatca tcagacattg aaatagacga cactgagatg acgcttacaa
       61 ttcttttggt ttctgtaata agtaatctga catcccccgt gcccagaaga ggagagggat
      121 atcaagccca agggttaata attgatacta cggttaaaat tgccttcagt aaaggaaacg
      181 tgattaaatt caggggattt cagagtgaaa accatacaac atattaaaat ctgttcattt
      241 agctataata catacaagaa agtgtccagt tagataatgt tatctaaata accacagata
      301 aaaacgcaca taattggggg ggggatgaaa atacctgaag cagtaaatca tattaatgtt
      361 cagaataata ttgatcttgt tgatggaaaa acgaatccga ataaagcaac aaaagcatta
      421 caaaaaaata tattgcgcgt aacaaactca tcttcttctg gcataagtga aaaacattta
      481 gatcactgtg ctaatactgt gaaaaacttt ttaaggaagt ctatagcagc gcaaagtt
//
LOCUS       DADKRT010000415          529 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.420, whole genome shotgun sequence.
ACCESSION   DADKRT010000415 DADKRT010000000
VERSION     DADKRT010000415.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.420"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..529
                     /locus_tag="JQ356_004411"
                     /pseudo
     CDS             1..529
                     /locus_tag="JQ356_004411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417134.2"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT          169 a          108 c          142 g          110 t
ORIGIN      
        1 catatggttc ggcaaataag acgattatta aagataaagg aacaatgtca gttttaacga
       61 atgctaaagc tgatgcgacc cgaatagata acggcggggt aatggatgtt accggaaacg
      121 cgaccaatac cataatcaat ggtggtacac agaatattaa taatcatggt attgccacgg
      181 gtaccaatat caacagcgga acacaaaata tcaagagcgg cgggaaagct gacacgacaa
      241 atatttccac cgggagccgg caggttgttg agaaagatgg tacggcaact ggcagcaata
      301 ttagcgccgg aggctcgctg attgtctata ccggcggtat agcacatggg gttaaccagg
      361 agacgggcag tgctttagtt gccaacacgg gcgcagggac tgatatcgaa ggatacaaca
      421 agctctctca cttcactatt acccggaggg gaggctaatt atgttgtgct ggaaaatacc
      481 ggcgaactga cggtagtggc taaaacctcg gcgaaaaata ctaccgttg
//
LOCUS       DADKRT010000416          528 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.421, whole genome shotgun sequence.
ACCESSION   DADKRT010000416 DADKRT010000000
VERSION     DADKRT010000416.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.421"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(283..>528)
                     /gene="dgcZ"
                     /locus_tag="JQ356_004412"
     CDS             complement(283..>528)
                     /gene="dgcZ"
                     /locus_tag="JQ356_004412"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcZ"
                     /protein_id="HAY4624255.1"
                     /translation="AANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE
                     EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV"
BASE COUNT          144 a          126 c          107 g          151 t
ORIGIN      
        1 gcattatctg aacataaaac actatcagta agttggagtc attacccaca aatgggatga
       61 ctaatgaacg gagataatcc ctcacctaac cggccccttg ttacagttgt gtacaagggg
      121 cctgattttt atgacggcga aaaaaaaccg ccagtaaacc ggcggtgaat gcttgcatgg
      181 atagatttgt gttttgcttt tacgctaaca ggcattttcc tgcactgata acgaatcgtt
      241 gacacagtag catcagtttt ctcaatgaat gttaaacgga gcttaaactc ggttaatcac
      301 attttgttcg tcaataaaca tacagcgatt tcttcccgtt tgcttaccct catacattgc
      361 ccggtctgct cttccaatga ccacatccag aggctcttca ggaaatgcgc gactgacacc
      421 tgctgtcacg gtaatgttga tatgcccttc agaatgtgtg atggcatggt tatcgactaa
      481 ctggcaaatt ctgacacctg cacgacatgc ttcttcatca ttagccgc
//
LOCUS       DADKRT010000417          528 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.422, whole genome shotgun sequence.
ACCESSION   DADKRT010000417 DADKRT010000000
VERSION     DADKRT010000417.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.422"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..325
                     /gene="dsbG"
                     /locus_tag="JQ356_004413"
     CDS             <1..325
                     /gene="dsbG"
                     /locus_tag="JQ356_004413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415137.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HAY4624256.1"
                     /translation="SGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYKASGGK
                     LKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNI
                     IMGNK"
BASE COUNT          191 a           98 c          114 g          125 t
ORIGIN      
        1 ttctggcaaa gtgcaattaa gaacattgtt ggttggggtt atcaagccag aaagcccggc
       61 gacagcagcg gcaattcttg cctccaaaga tcccgcaaaa acctggcaac aatataaagc
      121 ctctggtggc aagcttaagc taaacgtgcc tgcaaacgta agtacagagc aaatgaaagt
      181 gttaagtgac aatgagaaac tgatggacga tctgggggca aatgtcacgc cggctatcta
      241 ttacatgagt aaggaaaata cgctacaaca ggccgtgggg ttgcccgatc agaaaacgct
      301 taatatcatt atggggaata aataaaaggt aattcatgga tggttgaact atatctctgc
      361 ttttcaacca tcctaaaaag catgaattgc tcgctctgcc ctaagtggct gtgctatttt
      421 agaaaaactt aatcctgagt taagcaaaaa aacataatca ataaaaatat atacgcagaa
      481 aaacattgat taagtgaata tatcatggaa gaaaaatata accggagt
//
LOCUS       DADKRT010000418          516 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.423, whole genome shotgun sequence.
ACCESSION   DADKRT010000418 DADKRT010000000
VERSION     DADKRT010000418.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.423"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(1..104)
                     /locus_tag="JQ356_004414"
                     /pseudo
     CDS             complement(1..104)
                     /locus_tag="JQ356_004414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001672075.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1472 domain-containing protein"
     gene            235..516
                     /locus_tag="JQ356_004415"
                     /pseudo
     CDS             235..516
                     /locus_tag="JQ356_004415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006322674.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          132 a          136 c          127 g          121 t
ORIGIN      
        1 tccccgccag cccggctaag atggaggcac ggcacagccc gcacacgacg ctgaggctac
       61 agagctgaaa acccacaagg ccatgccccg catggccggg taaagcggag ccggcggcga
      121 cttcctttgt gctctgtccg ggaccggcag gaaaaaggcg gggataatga gatggtcacc
      181 cccaccctaa cagcagtacg ctgttaaggt gaatccctta acggagagac catcatacag
      241 aacatcacac ttattggtat cgatctcgga aagcattcct tccacattca ttgtcaagac
      301 aagtctggta aggctcttct gcgtaaaaaa tttacccagt actaaactga tgcagtttct
      361 ggcaacatgt ccgccctcag ttgttgtaat ggaagcctgt gcgggtgcac actttttggc
      421 tcgccgtatc tctgaatttt ggacatgaaa ctaagctgat ttctccacag ttcgttcgcc
      481 cgtttgtcaa aagtaataag aatgattttg ttgatg
//
LOCUS       DADKRT010000419          485 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.424, whole genome shotgun sequence.
ACCESSION   DADKRT010000419 DADKRT010000000
VERSION     DADKRT010000419.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.424"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..333)
                     /locus_tag="JQ356_004416"
     CDS             complement(<1..333)
                     /locus_tag="JQ356_004416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707670.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HAY4624257.1"
                     /translation="MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLTALALSLFTGL
                     LLVLVAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALY
                     LPFLFLPES"
BASE COUNT          149 a          104 c          115 g          117 t
ORIGIN      
        1 actttccggt aaaaataaaa acggtaaata gagcgcaata tcggaaataa catcgccagt
       61 ttcattcaaa atcgccccca gacgtgtttg ctgattgcac tcacgcgcca acatgccatc
      121 cagcgcattg agcgccatac ggataaaaag cacgatgggc aatagcaaaa agaggatggg
      181 ttgtgccacc aacaccaaca gcaatccggt aaaaagagaa agcgccagtg ccgtaagagt
      241 gatgtgattc gctgtaacgt ggtgcttata aagccaaaac atcgtcggcc ttaacagcga
      301 ctgaaagagc ggttttatct ggtagagcgt catttatcat tccgtgatat tcagtttgct
      361 ctatggtgca tcaattgtga tggcggagat atcacaacgc ggagcatcaa cgtaaattcg
      421 gaatatatca agatgtggtg gatggttttc ctacacatct gtttgattac cgactggatg
      481 tcagt
//
LOCUS       DADKRT010000420          468 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.425, whole genome shotgun sequence.
ACCESSION   DADKRT010000420 DADKRT010000000
VERSION     DADKRT010000420.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.425"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            109..468
                     /locus_tag="JQ356_004417"
                     /pseudo
     CDS             109..468
                     /locus_tag="JQ356_004417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          121 a          115 c          110 g          122 t
ORIGIN      
        1 tttttaacgt aaggtgagag gatttttaag tgtatccata gattaaaaat gacaatgcct
       61 ccaattagtt gaattagggg ttataatacc cgcttttaag gttctttcat ggtcacagtt
      121 aactttcatt gcccccgttg ccagtccgtt caggtttacc gtcacgggca gaacccaaaa
      181 ggacatgatc gattccgttg ccgtgactgt caccgggtgt ttcagctcac ttactgttac
      241 gaggcccgta aaccgggagt taaaaaccaa atcactgaaa tggcttcaac ggtgccggag
      301 ttcgcgatac tgcccgtacg ctgaaaatcg gcatcaatac cgtcatacgg acattaaaaa
      361 gctcccgccc cggcggataa catctgcgcc agtcgctcac gctgatgttg cccttatctg
      421 tgaacttgat gggcagtgga gcttcgttgg cagcaaggcg caacaaca
//
LOCUS       DADKRT010000421          455 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.426, whole genome shotgun sequence.
ACCESSION   DADKRT010000421 DADKRT010000000
VERSION     DADKRT010000421.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.426"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            192..268
                     /locus_tag="JQ356_004418"
     tRNA            192..268
                     /locus_tag="JQ356_004418"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:226..228,aa:Arg,seq:acg)
BASE COUNT          130 a          105 c          121 g           99 t
ORIGIN      
        1 cgaaatcttc agcaatgaag gtatcgaaga ggtagcggaa ttaaccgcag gcactaggga
       61 tgataacgtt gctttagcaa cggcccgaag ggcgagccgc aaggcgagta atcctcccgg
      121 atgcaccatc tcttacttga tatggcttta gtagcgatat caatatcagc agtaaaataa
      181 attttcccga tgcatccgta gctcagctgg atagagtact cggctacgaa ccgagcggtc
      241 ggaggttcga atcctcccgg atgcaccata ttctacgtac tttcagcgat gaaggtatgg
      301 aagaggtggc ggtataaccg caggcaccag ggaggataac gttgctttag caacggccag
      361 aagggcgagc cgcaaggcga gtaatcctcc cgaatgcacc atctcttact tgatacggct
      421 ttagtagcgg tatcaaaaaa tctgcagtaa agtaa
//
LOCUS       DADKRT010000422          447 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.427, whole genome shotgun sequence.
ACCESSION   DADKRT010000422 DADKRT010000000
VERSION     DADKRT010000422.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.427"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            35..447
                     /locus_tag="JQ356_004419"
                     /pseudo
     CDS             35..447
                     /locus_tag="JQ356_004419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          101 a          115 c          121 g          110 t
ORIGIN      
        1 atttagtgta tgatggtgat tttaaggtgc ttgcgtggct tccatttcca tcagatgtcc
       61 ttcctgctcc gctactgaag gcgtggtgcg taacggcaaa agcactgccg gacatcagcg
      121 ctatctctgc tctcattgcc gtaaaacatg gcaactacag ttcacttaca ccgcctctca
      181 gcccggtacg caccagaaaa tcattgatat ggccatgaat ggcgtcggat gtcgcgccag
      241 tgcacgcatt atgggcgttg gcctcaacac ggttttacgt cacttaaaaa actcaggccg
      301 cagtcggtaa cctcgcgcat acaaccgggc agtgatgtga ttgtctgcgc tgaaatggac
      361 gaacagtggg gctacgtcgg tgctaaatca cgtcagcgct ggctgtttta cgcgtatgac
      421 aggatacgga ggacggttgt ggcgcac
//
LOCUS       DADKRT010000423          443 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.428, whole genome shotgun sequence.
ACCESSION   DADKRT010000423 DADKRT010000000
VERSION     DADKRT010000423.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.428"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(357..>443)
                     /locus_tag="JQ356_004420"
     CDS             complement(357..>443)
                     /locus_tag="JQ356_004420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HAY4624258.1"
                     /translation="RQMQARRVLQQMSDERLRDIGLRREDVE"
BASE COUNT          119 a          102 c           83 g          139 t
ORIGIN      
        1 ttcattgtat cctctggcag gtgtataatt agcgaattga tactagcaac gaagcttcgg
       61 ttatctattt gcagagaatt gtttcattat gaactgtgag cgcgataact aatttttgat
      121 acaaaaattt cattaatgtg atctaaaacg aatcgcttta ttcaccgctg atgattttgt
      181 tctattcctt tttgtgacag atcccccgga cgcatagatg atgaccccca gagagacagc
      241 tcaggtcatt atctgtatgt aaatcagaaa aatatgttgt aaacgacttt tatggttgga
      301 ttttgtagca attttgaatg cagacaggca gcatttgcca acacgccgcc catagttcac
      361 tccacatcct ccctgcgtaa cccgatatcc ctcaaccgtt catcactcat ctgctgtaac
      421 acccgtcggg cctgcatttg ccg
//
LOCUS       DADKRT010000424          438 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.429, whole genome shotgun sequence.
ACCESSION   DADKRT010000424 DADKRT010000000
VERSION     DADKRT010000424.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.429"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..200)
                     /locus_tag="JQ356_004421"
     CDS             complement(<1..200)
                     /locus_tag="JQ356_004421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624259.1"
                     /translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
                     ATEHFSDWGYYKVNLIGGEQQIA"
     gene            complement(289..>438)
                     /locus_tag="JQ356_004422"
     CDS             complement(289..>438)
                     /locus_tag="JQ356_004422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY4624260.1"
                     /translation="AIMIMAYSVIGLISALKMPEVKDRDLSAQEDAAEDQPRVVRAAQ
                     PSRSL"
BASE COUNT          126 a           99 c           88 g          125 t
ORIGIN      
        1 gcaatttgct gttcgccgcc gattaagttg accttataat atccccagtc actgaaatgt
       61 tctgtagcaa gaatatcggc atacacgccc tgatgcgcac ggtgaaatgc accaaagcct
      121 aaatgaacaa ttcttggggc caggttatta cgatcataaa cagggagtgt cgcttttgct
      181 gataacaaat tatttcccat aacaattcct taaatttaaa tatggcaagc tatatgtttt
      241 gttatatgaa taaaaatccc ctctccggta agagaaggga ttgagggttt acagacttct
      301 ggaaggttgc gcagctctta caacacgcgg ttgatcttcc gcagcgtctt cctgcgcact
      361 taaatcacgg tctttcacct ctggcatttt cagcgcagag attaaaccaa tcactgaata
      421 tgccatgatc ataatggc
//
LOCUS       DADKRT010000425          429 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.430, whole genome shotgun sequence.
ACCESSION   DADKRT010000425 DADKRT010000000
VERSION     DADKRT010000425.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.430"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..165
                     /locus_tag="JQ356_004423"
     CDS             <1..165
                     /locus_tag="JQ356_004423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4624261.1"
                     /translation="EEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSVITDKTSYNAI
                     EWPVSPEGSS"
     gene            189..>429
                     /locus_tag="JQ356_004424"
     CDS             189..>429
                     /locus_tag="JQ356_004424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4624262.1"
                     /translation="MSVVISGALTDGAGIPMSGYHIILKSRVNTPEVVMHTVADVMTG
                     NDGEYCFHARTGKYGVYLKPGWHNEYNVGDIAVYED"
BASE COUNT          118 a           94 c          114 g          103 t
ORIGIN      
        1 gaagaagacc tgctgctggg gctaatcagc gacgaagacc gggaaaaact gaaagcgtac
       61 cgcatttacg cgaaatcgct gcaggcgatg gatttcagtg tcatcactga taaaacctca
      121 tacaacgcca ttgaatggcc cgtctctccg gaaggttctt cctgatttaa tttatcgcga
      181 gaaaaactat gtctgtagtg atatcaggtg cgctgactga tggcgcaggt atccccatgt
      241 ccggatacca tattattctg aaatcccggg taaacacccc ggaagtggtg atgcacactg
      301 ttgctgatgt gatgacagga aacgatggtg aatactgttt ccatgcgcgg actggaaaat
      361 atggtgtgta tctgaaaccg ggctggcaca acgagtacaa cgttggcgac attgctgtat
      421 atgaggact
//
LOCUS       DADKRT010000426          425 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.431, whole genome shotgun sequence.
ACCESSION   DADKRT010000426 DADKRT010000000
VERSION     DADKRT010000426.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.431"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..380)
                     /locus_tag="JQ356_004425"
     CDS             complement(<1..380)
                     /locus_tag="JQ356_004425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HAY4624263.1"
                     /translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
                     SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
                     QRLGSEAVRRVFTKTAQLWHNATP"
BASE COUNT          108 a          107 c          128 g           82 t
ORIGIN      
        1 tgcggcgtgg cgttatgcca gagctgcgct gttttcgtga acacgcggcg gacagcctca
       61 cttcccaggc gctggcgggc ctgaataacg gcactggggg caacgaaggg gcgattgccc
      121 ggcagcatga tgtccaggcg attcacaatc tggtgaagag gttctttacg ctcaagcgcc
      181 atgccaacaa tacaccagac catcatttcg aggggaagac ggcgcttgcg tagcgttaca
      241 gtacctgatt cggcaaggca acgagagatg agttcggggt cgaggtaatc ccccagagaa
      301 gtcagtgggt tacgcagaga atcgtaacgg gataccagat caagagcctg tccaatgtgc
      361 ataaaaaaat ccggaaacaa gtgagcgttt ccggattctt acacagccac tggatcggtc
      421 aactg
//
LOCUS       DADKRT010000427          415 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.432, whole genome shotgun sequence.
ACCESSION   DADKRT010000427 DADKRT010000000
VERSION     DADKRT010000427.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.432"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..164)
                     /locus_tag="JQ356_004426"
     CDS             complement(<1..164)
                     /locus_tag="JQ356_004426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HAY4624264.1"
                     /translation="MPQLKGVIKTPTGEPLDGATITLTSIHNRAGILKSVFSHVTTQN
                     GEYDFPVLPGV"
     gene            complement(151..>415)
                     /locus_tag="JQ356_004427"
     CDS             complement(151..>415)
                     /locus_tag="JQ356_004427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY4624265.1"
                     /translation="FYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISD
                     EDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA"
BASE COUNT           85 a          109 c          104 g          117 t
ORIGIN      
        1 acacccggca gaacggggaa gtcatattcc ccgttctgtg tggtgacatg gctgaaaaca
       61 cttttcagaa tccctgcacg gttgtgtatg gaggttagtg taatggttgc gccgtccagc
      121 ggttctcccg tgggcgtttt aatcacacct ttaagctgcg gcatcgggac gctccggcca
      181 gttgatggcg ttatatgtgg ctttatctgt gatggtgctg aaatccatcg cctgcagcga
      241 tttcgcgtaa atacgacagg ctttcagctt ttctttatct tcgtcgctga ttaaccccag
      301 cagcaggtct tcttcccatt cccctgtccg ggcactgacc tgagccagaa gggcatcacg
      361 ctcatcttcc gctttgagtc tgtagtcaaa gacaaattca tcattgcggt aaaac
//
LOCUS       DADKRT010000428          413 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.433, whole genome shotgun sequence.
ACCESSION   DADKRT010000428 DADKRT010000000
VERSION     DADKRT010000428.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.433"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>413
                     /locus_tag="JQ356_004428"
     CDS             <1..>413
                     /locus_tag="JQ356_004428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY4624266.1"
                     /translation="GKMASWLVEWKNATETQWLKDAPSQPLQQSLKDLERAYKNFFQN
                     RAAFPRFKKRGQNDVFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQ
                     SCGKWYISIQTESEVSTPVHPSASMVGLDAGVAKL"
BASE COUNT          109 a          101 c          111 g           92 t
ORIGIN      
        1 cgggaaaatg gcttcctggc tggttgagtg gaaaaatgcc actgaaacgc aatggcttaa
       61 agatgccccg tcacagccat tgcaacagtc actgaaagac cttgagcggg cttacaaaaa
      121 cttcttccag aatcgggctg cttttccccg attcaaaaag cggggacaga atgatgtatt
      181 ccgctacccg cagggcgtta agctcgatca ggaaaacagc cgtatttttc tgccgaaact
      241 gggctggatg cgctaccgga acagccgtca ggtcacgggt gttgtgaaaa atgtcactgt
      301 cagccagtcc tgcggtaagt ggtacatcag tattcagaca gaaagtgaag tatcaactcc
      361 ggttcaccct tcagcatcaa tggtcgggct ggatgctggc gtggctaaac tcg
//
LOCUS       DADKRT010000429          402 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.434, whole genome shotgun sequence.
ACCESSION   DADKRT010000429 DADKRT010000000
VERSION     DADKRT010000429.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.434"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            17..397
                     /gene="leuE"
                     /locus_tag="JQ356_004429"
     CDS             17..397
                     /gene="leuE"
                     /locus_tag="JQ356_004429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000675823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HAY4624267.1"
                     /translation="MVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWA
                     GVATLIKTTPILFNIVRYLGAFYLLYLESKILYATLKGKNNEAKSDEPQYGAIFKRAL
                     ILSLTNPKAILFYVSFGNAANLLI"
BASE COUNT           95 a           77 c          100 g          130 t
ORIGIN      
        1 ggttggggcc atttttattg tgttggtgcc tgggccaaat accctgtttg tactcaaaaa
       61 tagcgtcagt agcggtatga aaggcggtta tcttgcggcc tgcggtgtat ttattggcga
      121 tgcagtattg atgtttctgg catgggctgg agtggcgaca ttaattaaga ccaccccgat
      181 attattcaac attgtacgtt atcttggtgc gttttatttg ctctatctgg agagtaaaat
      241 tctctacgcg accctgaagg gtaaaaataa cgaggccaaa tccgatgagc cccaatacgg
      301 ggccattttt aaacgcgcgt taattttgag cctgactaat ccgaaagcca ttttgttcta
      361 tgtgtcgttt ggtaatgctg ccaacttact gatttagtgt at
//
LOCUS       DADKRT010000430          387 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.435, whole genome shotgun sequence.
ACCESSION   DADKRT010000430 DADKRT010000000
VERSION     DADKRT010000430.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.435"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>387
                     /locus_tag="JQ356_004430"
     CDS             <1..>387
                     /locus_tag="JQ356_004430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY4624268.1"
                     /translation="EFNLKAHIFLITSFIGNGPVRHSPGKEYSHRDCEHQIATGNADN
                     VMLRWSEVNEMLQSGLVEFHVHTHTHTRWDKKFTSREEQCKHLRQDLLSGREYLKKMT
                     GKCSKHLCWPEGYYNKDYIQIAEELGF"
BASE COUNT          124 a           64 c           85 g          114 t
ORIGIN      
        1 gagtttaatc tcaaggcaca tattttttta attaccagtt ttattggaaa tggtccggtt
       61 cgtcactctc ctggaaagga atattctcat cgcgattgcg aacatcaaat agcaaccggg
      121 aatgctgata atgttatgct tcgctggtct gaagtgaacg aaatgttgca atctggtctg
      181 gtcgaatttc atgttcatac acatactcat acacgttggg ataaaaagtt cacttcacga
      241 gaagaacagt gtaaacatct tcggcaggac ttattgagcg ggagagaata tttaaaaaaa
      301 atgacaggaa aatgcagtaa acatttgtgt tggccggaag gttattataa caaggattat
      361 attcagatcg ctgaagaact tggattc
//
LOCUS       DADKRT010000431          374 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.436, whole genome shotgun sequence.
ACCESSION   DADKRT010000431 DADKRT010000000
VERSION     DADKRT010000431.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.436"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            1..374
                     /locus_tag="JQ356_004431"
                     /pseudo
     CDS             1..374
                     /locus_tag="JQ356_004431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921623.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT           73 a          125 c          103 g           73 t
ORIGIN      
        1 cgtctgggta aacgccttgc agcagacata gctcaggcac tggccgaaca aaccgtcgtc
       61 gttcccggca cgaatgccgc tgccgtagta ctgccacgtc tggcactcca gctcatcacg
      121 ctgcgtaagc aaagagacga ggtggcgctt gaggtagaac agcgagttct tgctcaccct
      181 ctttacccgg tcctgaccag tatgcccgga gtcggtgtca ggaccgcagc cagacacctc
      241 accgaggtcg cctgccggcc ttcgcctctg ccgcacatct cgctgcttat gctggccttg
      301 cgccggtaac tcggcgatcc ggctcgtcaa tacgcggtga gcatccctcg cgacggggta
      361 ataaagctct caaa
//
LOCUS       DADKRT010000432          366 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.437, whole genome shotgun sequence.
ACCESSION   DADKRT010000432 DADKRT010000000
VERSION     DADKRT010000432.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.437"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(<1..356)
                     /locus_tag="JQ356_004432"
     CDS             complement(<1..356)
                     /locus_tag="JQ356_004432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HAY4624269.1"
                     /translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL
                     QYQPNKQARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQT
                     SHNPAEDLQKCESKIK"
BASE COUNT           89 a           82 c           90 g          105 t
ORIGIN      
        1 tgcttaattt tgctttcaca tttttgtaag tcttctgccg gattgtgcga cgtctgcaat
       61 atcacgtcga aaccttcctc ttcagctttg gcggtgatgg catgcaaaac ttcagagaaa
      121 aacggattac ccgccgtagt tttggtcgaa cgggtagaaa tcaccataat ggcatcaaaa
      181 cccgaagagg tcagcgcgcg ggcctgcttg tttggctgat actgtaattc ttcaatggcc
      241 cgtaacactt tttcgcgcgc ttccggggag atattagttt gcttattcag cacgcgtgat
      301 acggtggatt ttgatacgcc tgcaaccctg gcaatatcat aaatagtagg ggacataggt
      361 caggaa
//
LOCUS       DADKRT010000433          364 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.438, whole genome shotgun sequence.
ACCESSION   DADKRT010000433 DADKRT010000000
VERSION     DADKRT010000433.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.438"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
BASE COUNT           81 a          104 c           85 g           94 t
ORIGIN      
        1 taaccggctc atttaaaccg tctggtctgt ttcctccggc tccacaaaaa taatgtccat
       61 cattttgaag tggacactat cgtatggaat accggacctg gatcactgaa gctttacgcc
      121 ttcatttcga agaacattta ccacgggttg tggccggacg tcgcctgggc gtaccaaaat
      181 caactgtctg tggtatgttc gtgcgcttcc gcaacgctgg cctttcatgg cctctgcccg
      241 caggtatgtc ggagcaggaa cttgatgccc ttctttacgg aagtgcctcc acagtacctg
      301 tcgtacttac tgaaagcacc gttatgccca aactcccggt ggtaaaaaaa cgtccccggc
      361 ggcc
//
LOCUS       DADKRT010000434          361 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.439, whole genome shotgun sequence.
ACCESSION   DADKRT010000434 DADKRT010000000
VERSION     DADKRT010000434.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.439"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..>361
                     /locus_tag="JQ356_004433"
     CDS             <1..>361
                     /locus_tag="JQ356_004433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HAY4624270.1"
                     /translation="KQTMQLSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHL
                     KGYWPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPR
                     VVKERPWKYPTAPKKSQS"
BASE COUNT          108 a           71 c          111 g           71 t
ORIGIN      
        1 aaacagacga tgcaactgag caggctgacg ctgagaagta aaaagccgga gcttgtggag
       61 caagagctgt ggggtgtctt actggcttat aatctggtga gatatcagat gattaaaatg
      121 gcggaacatc tgaaaggtta ctggccgaat caactgagtt tctcagaatc atgcggaatg
      181 gtgatgagaa tgctgatgac attgcagggc gcttcaccgg gacgtatacc ggagctgatg
      241 cgcgatcttg caagtatggg acaacttgtg aaattaccga cgagaagggg aagggccttc
      301 ccgagagtgg taaaggagag gccctggaaa taccccacag ccccgaaaaa gagccagtca
      361 g
//
LOCUS       DADKRT010000435          356 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.denovo.440, whole genome shotgun sequence.
ACCESSION   DADKRT010000435 DADKRT010000000
VERSION     DADKRT010000435.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.denovo.440"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            7..>356
                     /locus_tag="JQ356_004434"
     CDS             7..>356
                     /locus_tag="JQ356_004434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004974580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY4624271.1"
                     /translation="MSGCQIILKSRVNTSEVVMRTRADVVTGNNGEYSFEAQVGKYCV
                     YLKRDWRDEYCVGDIAVYDDSKPGTLNDFLTAPDEGDLKPDVVKRFEEMVAQAQQSAG
                     AAAGNAQQTAQDVAA"
BASE COUNT           88 a           87 c          113 g           68 t
ORIGIN      
        1 atccccatgt ccggatgcca gattattctg aaatcccgtg taaacacctc agaagtggtg
       61 atgcgtacca gggctgatgt agtgaccgga aataacggtg aatattcgtt tgaggcacag
      121 gtcggaaaat attgcgtgta tctgaaacgg gactggcgcg acgagtactg tgttggcgac
      181 attgctgtat acgacgactc aaagcccggc acgctgaatg actttctgac tgcccccgat
      241 gaaggcgacc tgaagccgga tgtcgtcaaa cgctttgagg aaatggtggc gcaggcgcag
      301 cagagcgccg gggccgcagc cggaaacgca cagcagacgg cgcaggatgt ggcggc
//
LOCUS       DADKRT010000436        22184 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.guided.058, whole genome shotgun sequence.
ACCESSION   DADKRT010000436 DADKRT010000000
VERSION     DADKRT010000436.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22184
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.guided.058"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            262..921
                     /locus_tag="JQ356_004435"
     CDS             262..921
                     /locus_tag="JQ356_004435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HAY4624272.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
     gene            complement(1122..1499)
                     /locus_tag="JQ356_004436"
     CDS             complement(1122..1499)
                     /locus_tag="JQ356_004436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4624273.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
     gene            complement(1566..4532)
                     /locus_tag="JQ356_004437"
     CDS             complement(1566..4532)
                     /locus_tag="JQ356_004437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs3 family transposase"
                     /protein_id="HAY4624274.1"
                     /translation="MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRG
                     PANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRRE
                     HLSELQTVFGFRPFTMSHYRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALN
                     AVERASAEAITRANRRIYDALAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKP
                     NSRHMLEHIERLKAWQALDLPTGIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYA
                     TLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIG
                     QALIDAKQSGRDAFAAIEAIMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRY
                     APEFLAVLKLRAAPAAKNVLDAIEVLRGMNTDNARKLPADAPTGFIKPRWQKLVMTDA
                     GIDRRYYELCALSELKNSLRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSELPLAV
                     ATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQALI
                     DQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLT
                     KMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTSSSDGQ
                     NFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVLDGLLY
                     HESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKP
                     MIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRI
                     ERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASG
                     LNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSA
                     KIGAGKFRPLRPLQPA"
     gene            complement(4535..4978)
                     /locus_tag="JQ356_004438"
     CDS             complement(4535..4978)
                     /locus_tag="JQ356_004438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY4624275.1"
                     /translation="MRQKAASSLTLQQCPGDTVVVHSMDRLARNLDDLRRIVQTLTQR
                     GVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRG
                     RKKSLSSERIAELRQRVEAGEQKTKLAREFGISRETLYQYLRTDQ"
     gene            complement(4988..5692)
                     /locus_tag="JQ356_004439"
     CDS             complement(4988..5692)
                     /locus_tag="JQ356_004439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HAY4624276.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYAAIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     gene            complement(5738..5923)
                     /locus_tag="JQ356_004440"
                     /pseudo
     CDS             complement(5738..5923)
                     /locus_tag="JQ356_004440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004213255.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(6049..6399)
                     /locus_tag="JQ356_004441"
     CDS             complement(6049..6399)
                     /locus_tag="JQ356_004441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000454193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3330 domain-containing protein"
                     /protein_id="HAY4624277.1"
                     /translation="MEVVAEGVETPDCLAWLRQAGCDTVQGFLFARPMPAAAFVGFVN
                     QWRNTTMNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATE
                     TSVKPDACDSPPSG"
     gene            complement(6602..7615)
                     /gene="intI1"
                     /locus_tag="JQ356_004442"
     CDS             complement(6602..7615)
                     /gene="intI1"
                     /locus_tag="JQ356_004442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 integron integrase IntI1"
                     /protein_id="HAY4624278.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVNWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQ
                     EIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
                     DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALER
                     KYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATP
                     HTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLT
                     SER"
     gene            7760..8257
                     /locus_tag="JQ356_004443"
     CDS             7760..8257
                     /locus_tag="JQ356_004443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004187529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA21"
                     /protein_id="HAY4624279.1"
                     /translation="MNPESVRIYLVAAMGANRVIGNGPDIPWKIPGEQKIFRRLTESK
                     VVVMGRKTFESIGKPLPNRHTVVLSRQARYSAPGCAVVSTLSQAIAIAAEHGKELYVA
                     GGAEVYALALPHANGVFLSEVHQTFEGDAFFPVLNAAEFEVVSSETIQGTITYTHSVY
                     ARRNG"
     gene            8353..9156
                     /locus_tag="JQ356_004444"
     CDS             8353..9156
                     /locus_tag="JQ356_004444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032488483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-5 family class D beta-lactamase OXA-129"
                     /protein_id="HAY4624280.1"
                     /translation="MKTIAAYLVLVFFAGTALSESISENLAWNKEFSSESVHGVFVLC
                     KSSSNSCTTNNATRASTAYIPASTFKIPNALIGLETGAIKDARQVFKWDGKPRAMKQW
                     EKDLTLRGAIQVSAVPVFQQIARDIGKKRMQKYLNLFSYGNANIGGGIDKFWLEGQLR
                     ISAVNQVKFLESLYLNNLPASKANQLIVKEAIVTEATPEYIVHSKTGYSGVGTESNPG
                     VAWWVGWVEKGTEVYFFAFNMDIDNESKLPSRKSIPTKIMASEGIIIGG"
     gene            9361..9708
                     /locus_tag="JQ356_004445"
     CDS             9361..9708
                     /locus_tag="JQ356_004445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacE delta 1"
                     /protein_id="HAY4624281.1"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
     gene            9702..10541
                     /gene="sul1"
                     /locus_tag="JQ356_004446"
     CDS             9702..10541
                     /gene="sul1"
                     /locus_tag="JQ356_004446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000259031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul1"
                     /protein_id="HAY4624282.1"
                     /translation="MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDV
                     GPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLND
                     IQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSAL
                     RRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGAT
                     VGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGL
                     DHA"
     gene            10669..11169
                     /locus_tag="JQ356_004447"
     CDS             10669..11169
                     /locus_tag="JQ356_004447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY4624283.1"
                     /translation="MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARI
                     DRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHA
                     GRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAE
                     RLELEI"
     gene            complement(11345..12127)
                     /locus_tag="JQ356_004448"
     CDS             complement(11345..12127)
                     /locus_tag="JQ356_004448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004630242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY4624284.1"
                     /translation="MQHEGHVRILKSLKLFGMAHAIEELGNQNSPAFNQALPMLDSLI
                     KAEVAEREVRSVNYQLRVAKFPVYRDLVGFDFSQSLVNEATVKQLHRCDFMEQAQNVV
                     LIGGPGTGKTHLATAIGTQAVMHLNRRVRFFSTVDLVNALEQEKSSGRQGQIANRLLY
                     ADLVILDELGYLPFSQTGGALLFHLLSKLYEKTSVILTTNLSFSEWSRVFGDEKMTTA
                     LLDRLTHHCHILETGNESYRFKHSSTQNKQEEKQTRKLKIET"
     gene            complement(12117..13640)
                     /locus_tag="JQ356_004449"
     CDS             complement(12117..13640)
                     /locus_tag="JQ356_004449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001324342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element IS1326 family transposase"
                     /protein_id="HAY4624285.1"
                     /translation="MINVAILSAIRRWHFRDGASIREIARRSGLSRNTVRKYLQSKVV
                     EPQYPARDSVGKLSPFEPKLRQWLSTEHKKTKKLRRNLRSMYRDLVALGFTGSYDRVC
                     AFARQWKDSEQFKAQTSGKGCFIPLRFACGEAFQFDWSEDFARIAGKQVKLQIAQFKL
                     AHSRAFVLRAYYQQKHEMLFDAHWHAFQIFGGIPKRGIYDNMKTAVDSVGRGKERRVN
                     QRFTAMVSHYLFDAQFCNPASGWEKGQIEKNVQDSRQRLWQGAPDFQSLADLNVWLEH
                     RCKALWSELRHPELDQTVQEAFADEQGELMALPNAFDAFVEQTKRVTSTCLVHHEGNR
                     YSVPASYANRAISLRIYADKLVMAAEGQHIAEHPRLFGSGHARRGHTQYDWHHYLSVL
                     QKKPGALRNGAPFAELPPAFKKLQSILLQRPGGDRDMVEILALVLHHDEGAVLSAVEL
                     ALECGKPSKEHVLNLLGRLTEEPPPKPIPIPKGLRLTLEPQANVNRYDSLRRAHDAA"
     gene            13763..15307
                     /locus_tag="JQ356_004450"
                     /pseudo
     CDS             13763..15307
                     /locus_tag="JQ356_004450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558248.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS1353 family transposase"
     gene            complement(15358..16218)
                     /locus_tag="JQ356_004451"
     CDS             complement(15358..16218)
                     /locus_tag="JQ356_004451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY4624286.1"
                     /translation="MDEYPIIDLSHLLPAAQGLARLPADERIQRLRADRWIGYPRAVE
                     ALNRLEALYAWPNKQRMPNLLLVGPTNNGKSMIVEKFRRTHPASSDADQEHIPVLVVQ
                     MPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAG
                     NSVNRREFLNLLRFLGNELRIPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDD
                     CCSLLASFAASLPLRRPSPIATLDMARYLLTRSEGTIGELAHLLMAAAIVAVESGEEA
                     INHRTLSMAC"
     gene            complement(16221..17936)
                     /locus_tag="JQ356_004452"
     CDS             complement(16221..17936)
                     /locus_tag="JQ356_004452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HAY4624287.1"
                     /translation="MLNTRVHQSEVSMATDTPRIPEQGVATLPDEAWERARRRAEIIS
                     PLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRL
                     PEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPR
                     KVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLT
                     LAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLL
                     YLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTF
                     SNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGV
                     PAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADALKPWIARRERWPSFLIRRDP
                     RDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMI
                     GQMREIVTSAQKATRKARRDADRRQHLKTSARPDKPVPPDTDIADPQADNLPPAKPFD
                     QIEEW"
     gene            complement(17975..18643)
                     /locus_tag="JQ356_004453"
     CDS             complement(17975..18643)
                     /locus_tag="JQ356_004453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY4624288.1"
                     /translation="MAQAAARGQLDLHYQPLVDLRDHRIAGAEALMRWRHPRLGLLPP
                     GQFLPLAESFGLMPEIGAWVLGEACRQMHKWQGPAWQPFRLAINVSASQVGPTFDDEV
                     KRVLADMALPAELLEIELTESVAFGNPALFASFDALRAIGVRFAADDFGTGYSCLQHL
                     KCCPITTLKIDQSFVARLPDDARDQTIVRAVIQLAHGLGMDVIFRRRLHQLIGRNGCC
                     AASS"
     gene            complement(18679..18915)
                     /gene="merE"
                     /locus_tag="JQ356_004454"
     CDS             complement(18679..18915)
                     /gene="merE"
                     /locus_tag="JQ356_004454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="broad-spectrum mercury transporter MerE"
                     /protein_id="HAY4624289.1"
                     /translation="MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTA
                     GAFLGEHWGVAALALTGLFVLAVTRLLRAFRGGS"
     gene            complement(18912..19274)
                     /gene="merD"
                     /locus_tag="JQ356_004455"
     CDS             complement(18912..19274)
                     /gene="merD"
                     /locus_tag="JQ356_004455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance co-regulator MerD"
                     /protein_id="HAY4624290.1"
                     /translation="MSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDD
                     AALQRLCFVRAAFEAGIGLDALARLCRALDAADGAQAAAQLAVLRQLVERRRAALAHL
                     DAQLASMPAERAHEEALP"
     gene            complement(19292..20986)
                     /locus_tag="JQ356_004456"
     CDS             complement(19292..20986)
                     /locus_tag="JQ356_004456"
                     /EC_number="1.16.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004636758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury(II) reductase"
                     /protein_id="HAY4624291.1"
                     /translation="MSTLKITGMTCDSCAVHVKDALEKVPGVQSADVSYAKGSAKLAI
                     EVGTSPDALTAAVAGLGYRATLADAPSVSTPGGLLDKMRDLLGRNDKTGSSGALHIAV
                     IGSGGAAMAAALKAVEQGARVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESP
                     FDGGIAATTPTIQRTALLAQQQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNL
                     IVQLNDGGERVVAFDRCLIATGASPAVPPIPGLKDTPYWTSTEALVSETIPKRLAVIG
                     SSVVALELAQAFARLGAKVTILARSTLFFREDPAIGEAVTAAFRMEGIEVREHTQASQ
                     VAYINGEGDGEFVLTTAHGELRADKLLVATGRAPNTRKLALDATGVTLTPQGAIVIDP
                     GMRTSVEHIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALNLTAMPAVVFTDPQV
                     ATVGYSEAEAHHDGIKTDSRTLTLDNVPRALANFDTRGFIKLVVEEGSGRLIGVQAVA
                     PEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCCAG"
     gene            complement(21038..21460)
                     /gene="merC"
                     /locus_tag="JQ356_004457"
     CDS             complement(21038..21460)
                     /gene="merC"
                     /locus_tag="JQ356_004457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organomercurial transporter MerC"
                     /protein_id="HAY4624292.1"
                     /translation="MGLMTRIADKTGALGSVVSAMGCAACFPALASFGAAIGLGFLSQ
                     YEGLFISRLLPLFAALAFLANALGWFSHRQWLRSLLGMIGPAIVFAATVWLLGNWWTA
                     NLMYVGLALMIGVSIWDFVSPAHRRCGPDGCELPAKRL"
     gene            complement(21496..21771)
                     /gene="merP"
                     /locus_tag="JQ356_004458"
     CDS             complement(21496..21771)
                     /gene="merP"
                     /locus_tag="JQ356_004458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system periplasmic binding
                     protein MerP"
                     /protein_id="HAY4624293.1"
                     /translation="MKKLFASLALAAAVAPVWAATQTVTLAVPGMTCAACPITVKKAL
                     SKVEGVSKVDVGFEKREAVVTFDDTKASVQKLTKATADAGYPSSVKQ"
     gene            complement(21785..22135)
                     /locus_tag="JQ356_004459"
     CDS             complement(21785..22135)
                     /locus_tag="JQ356_004459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011111453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric transport protein MerT"
                     /protein_id="HAY4624294.1"
                     /translation="MSEPQNGRGALFAGGLAAILASTCCLGPLVLVALGFSGAWIGNL
                     TVLEPYRPLFIGAALVALFFAWKRIYRPVQACKPGEVCAIPQVRATYKLIFWIVAVLV
                     LVALGFPYVVPFFY"
BASE COUNT         4536 a         6438 c         6539 g         4671 t
ORIGIN      
        1 accatcatac actaaatcag taagttggca gcatcacccg acgcactttg cgccgaataa
       61 atacctgtga cggaagatca cttcgcagaa taaataaatc ctggtgtccc tgttgatacc
      121 gggaagccct gggccaactt ttggcgaaaa tgagacgttg atcggcacgt aagaggttcc
      181 aactttcacc ataatgaaat aagatcacta ccaggcgtat tttttgagtt atcgagattt
      241 tcaggagcta aggaagctaa aatggagaaa aaaatcactg gatataccac cgttgatata
      301 tcccaatggc atcgtaaaga acattttgag gcatttcagt cagttgctca atgtacctat
      361 aaccagaccg ttcagctgga tattacggcc tttttaaaga ccgtaaagaa aaataagcac
      421 aagttttatc cggcctttat tcacattctt gcccgcctga tgaatgctca tccggaattc
      481 cgtatggcaa tgaaagacgg tgagctggtg atatgggata gtgttcaccc ttgttacacc
      541 gttttccatg agcaaactga aacgttttca tcgctctgga gtgaatacca cgacgatttc
      601 cggcagtttc tacacatata ttcgcaagat gtggcgtgtt acggtgaaaa cctggcctat
      661 ttccctaaag ggtttattga gaatatgttt ttcgtctcag ccaatccctg ggtgagtttc
      721 accagttttg atttaaacgt ggccaatatg gacaacttct tcgcccccgt tttcaccatg
      781 ggcaaatatt atacgcaagg cgacaaggtg ctgatgccgc tggcgattca ggttcatcat
      841 gccgtttgtg atggcttcca tgtcggcaga atgcttaatg aattacaaca gtactgcgat
      901 gagtggcagg gcggggcgta atttttttaa ggcagttatt ggtgccctta aacgcctggt
      961 tgctacgcct gaataagtga taataagcgg atgaatggca gaaattcgaa agcaaattcg
     1021 acccggtcgt cggttcaggg cagggtcgtt aaatagccgc ttatgtctat tgctggttta
     1081 ccggtttatt gactaccgga agcagtgtga ccgtgtgctt ctcaaatgcc tgaggccagt
     1141 ttgctcaggc tctccccgtg gaggtaataa ttgacgatat gatcatttat tctgcctccc
     1201 agagcctgat aaaaacggtt agcgccgggg ttggattttt cagcgttcca gctaaggcta
     1261 aggcattcct gttcaagcgc aagccgggct ataaagcgca ttatcgcttt acccgtgccc
     1321 ttatttcgat cgcactgaga aacatacagc tctttaatat gcagctgacc gctgtatcgg
     1381 ggcgagggat aaagaatatt gcaacatgcc aggccagtaa tgttattgcc gcagcgcgct
     1441 ctgatcacca gggtaccgga aagccggttg aataactttt tacagagata atccttcatc
     1501 aacgcttcct gaatgatacc ttcgccataa taggggtcgt ctcagaaaac ggaaaataaa
     1561 gcacgctaag ccggttgcag aggccgtagc ggcctgaact tccccgcgcc gatcttggcg
     1621 ctgctgcgcc ataggtaatc accggtcagg ttgatgtgct cccagccgag tggcgacagg
     1681 tactgcaata gcgagtcatc gacggcatga ccattgccgc gcaacgcatg cgccgcacgc
     1741 tccaggtaga ccgtgttcca cagcacgatg gccgccgtca ccaggttgag gccgctggcc
     1801 cggtagcgct gctgctcgaa actgcggtca cggatttcac caaggcggtt gaagaacacg
     1861 gcacgggcca gcgcattgcg cgcctcgccc ttgttcagcc cggcatgcac gcggcggcgt
     1921 agctcgacgc tttgcagcca gtcgaggatg aacagcgtgc gctcgatgcg gcccaactcg
     1981 cgcagcgcga cggccaagcc gttctggcgc gggtagctgc cgagtttcct gagcatcagc
     2041 gaggccgtca ccgtgccctg cttgatcgag gtggccagcc gcaggatttc gtcccaatgg
     2101 gcgcggacgt gcttgatgtt gagcgtgccg ccgatcatcg gcttgagcgc gtcataggcg
     2161 gcatcgccct tcgggatgta gagcttggtg tcgcccaggt cgcggatgcg cggcgcgaag
     2221 cggaagccca agaggtgcat cagggcgaag acgtgatcgg tgaagcccgc cgtgtcggtg
     2281 tagtgctcct cgatccgcag gtcggattcg tggtacagca ggccgtcgag cacgtaggtt
     2341 gagtcgcgca ggccgacatt gaccaccttg gtgtggaatg gcgcgtattg gtcggagatg
     2401 tgggtgtaga aagtccgtcc tgggctgctg ccatattttg ggttgatgtg ccccgtgctc
     2461 tttgccttgc tagcggttcg gaaattctgt ccgtccgatg atgatgtggt gccatcgccc
     2521 cagtgcccgg caaagggatg ccgaaactga gcgttgacca gttcagccaa cgctgtcgag
     2581 tacgtttcgt cgcgggtatg ccaggcttgc agccaagcga gcttcgcgta ggtcgtgccg
     2641 gggcaggact cggccatctt ggtcaggccc aggttgatcg cgtcggccag gatcgtggtc
     2701 aacaacaggt tcttgtcctt ggccagatcg cccgatttca agtgcgtgaa gtgccgggtg
     2761 aagcccgtcc actcatcgac ttcgagcagc agttcggtga tcttgacgtg cggcaggacc
     2821 atggctgtct ggtctatcag cgcctgcgcg gtgtcgggca ccgccgcatc cagcggcgtg
     2881 atcttcaagc ccgactcggt gatgatggca tccggcaggt cgttggctgc cgccatgcgg
     2941 ttgacggtgg caagttgtgc ttccagcagc gtcagccgct catgcagata ttgttcgcag
     3001 tcggtggcca cggccagcgg caattcgctg gactgcttga ggctggtgaa cttctcgggc
     3061 ggtaccaggt agtcctcgaa gtccttgaac tggcgtgaac cctgcaccca gatgtcgccc
     3121 gagcgcaggg agttcttcaa ctcggacagc gcgcacagtt cgtagtagcg ccggtcgatg
     3181 ccggcgtcgg tcatcaccag tttctgccag cgcggcttga tgaagccggt cggtgcatcg
     3241 gctggcagct tgcgggcgtt gtcggtgttc atgccgcgca gcacctcaat ggcatcaagc
     3301 acgtttttgg cggcgggcgc ggcccgcagc ttgagcacgg caaggaattc cggtgcatag
     3361 cggcgcaggg tggcgtagct ctcgccgatg cgatgcagga aatcgaagtc atcgggttgc
     3421 gcgagcttct gcgcctcggt gacgctctcg gcaaaggaat cccaggacat gatggcctcg
     3481 atggcggcaa acgcatcgcg gcctgattgc ttggcgtcga tcagcgcctg accgatgcgc
     3541 ccgtacagac gtaccttggc gttgatggcc ttgcctgacg cctggaactg ctgctgatgc
     3601 ttattcttgg cagcgttaaa cagcttaccc aggatgcggt cgtgcaggtc gatgatttcg
     3661 tcggtgacgg tggccatgcc ctcggtggcc agcgccacga gagtggcgta gcgccgttgc
     3721 ggctcgaatt tggccaggtc ggcgggtgtc atctggccgc cctcgcgggc aatcttgagc
     3781 aggcggttct ggtgaaccag ccgctcgatg ccggtaggca gatcgagtgc ctgccatgcc
     3841 ttgaggcgtt cgatgtgttc cagcatatgc cgcgaatttg gcttggccgg agactggcgc
     3901 aaccaagcca accaggtcgt cttgccgttg tcccggcgct tgagcagatc gtcgaggcgg
     3961 cggcgatgcg cgtccgccag tggttcggcc aaggcgtcgt agatgcgccg gttagcacgg
     4021 gtgatcgcct cggcactcgc ccgctcgacg gcgttgaggg cgggcagaat gaccgactgc
     4081 cgccgcaggt gcccgatcaa ggcgctggcc agcacgatgc ctttgtcggt ttgcatcgcc
     4141 agctcggtca gcatctggac ggcctgccgg taatggctca tggtgaaggg ccggaaaccg
     4201 aacacggttt gcagctcgct caggtgctcg cgccgggtct gctcccgctg gccgtactcg
     4261 ttccagcttt cgacgccgac cttgagctgg tcggcgacca gcttcaacaa gggcgggaac
     4321 ggtagttcat cgacgcccag gatgacgccg ggaaagcgca ggtaacagag ctgcaccgcg
     4381 aagcccagcc gattggctgg cccgcgccgc tgtcggatga tcgagaggtc ggtatcgttg
     4441 aatgtgtaat gtcggatcag gtcgtccttg gagtccggca acgccagcag gctttcccgc
     4501 tcggcggcgg acaggatgga acgacgtggc atatttactg atccgttctc aagtattgat
     4561 acagggtttc gcgactgatt ccgaattcac gagcaagctt ggtcttttgc tcgccagcct
     4621 cgacacgttg gcgcagttcg gcaatacgct cagacgacag ggatttcttc ctgccacggt
     4681 aagccccgcg ttgcttggcg agcgcaatac cctcgcgctg acgctcgcgg atcagggcgc
     4741 gctcgaactc ggcgaacgcg cccatcaccg agagcatcag gttcgccatc ggagagtctt
     4801 cgccagtaaa actgaggtgt tccttgacga attcgatatg cacgccgcgt tgtgtcagcg
     4861 tttgcacgat ccggcgcaaa tcatcgagat tgcgcgccag gcgatccatg ctatgcacca
     4921 ccacggtgtc gccggggcac tgttgcaaag ttagcgatga ggcagccttt tgtcttattc
     4981 aaaggcctta catttcaaaa actctgctta ccaggcgcat ttcgcccagg ggatcaccat
     5041 aataaaatgc tgaggcctgg cctttgcgta gtgcacgcat cacctcaata cctttgatgg
     5101 cggcgtaagc cgtcttcatg gatttaaatc ccagcgtggc gccgattatc cgtttcagtt
     5161 tgccatgatc gcattcaatc acgttgttcc ggtacttaat ctgtcggtgt tcaacgtcag
     5221 acgggcaccg gccttcgcgt ttgagcagag caagcgcgcg accataggcg ggcgctttat
     5281 ccgtgttgat gaatcgcggg atctgccact tcttcacgtt gttgaggatt ttacccagaa
     5341 accggtatgc agctttgctg ttacgacggg aggagagata aaaatcgaca gtgcggcccc
     5401 ggctgtcgac ggcccggtac agatacgccc agcggccatt gaccttcacg taggtttcat
     5461 ccatgtgcca cgggcaaaga tcggaagggt tacgccagta ccagcgcagc cgtttttcca
     5521 tttcaggcgc ataacgctga acccagcggt aaatcgtgga gtgatcgaca ttcactccgc
     5581 gttcagccag catctcctgc agctcacggt aactgatgcc gtatttgcag taccagcgta
     5641 cggcccacag aatgatgtca cgctgaaaat gccggccttt gaatgggttc atgtgcagct
     5701 ccatcagcaa aaggggatga taagtttatc accaccgact atttgcaaca gtgccgtcgc
     5761 cggtgcgggc gaagcttatc agcgcttcca gttgcggacg cttgacatcc ttgccggatg
     5821 ccttgtcgct aaaagcgcga tcaaccttga cgccttccag ttgccgttcc gggttctggt
     5881 cgaaggtgct gaccctgata tacccaatgc gctgtccagt catggaattc cctgcaaaat
     5941 gtcagggaag actctatgac cttcaacgag atatgtcaat aaattcaaaa ttcaatccta
     6001 tcctgacgca atttacacat ggcatctgac atcaggttag ggtatgcctc aacctgacgg
     6061 cggcgaatca caagcgtccg gtttgacgct ggtttcggtc gcagtgctgg cccgcgcctg
     6121 gaagcgctga tagcactcca gcccgcagaa atgctccacg tactcggccc cttccggcgt
     6181 gaaggcggca tcgagcggga tttccttgca gcacacgcag caactggtgc tcggttcatt
     6241 ggcgttcatg gtggtgttcc tccattggtt gacgaagccg acgaaggccg ccgccggcat
     6301 cggcctggcg aacaggaaac cctgcaccgt gtcgcaaccc gcctgccgca accacgcaag
     6361 gcagtcgggt gtttccacac cctcggctac cacctccatt gtcgttttca gaagacggct
     6421 gcactgaacg tcagaagccg actgcactat agcagcggag gggttggatc catcaggcaa
     6481 cgacgggctg ctgccggcca tcagcggacg cagggaggac tttccgcaac cggccgttcg
     6541 atgcggcacc gatggccttc gcgcaggggt agtgaatccg ccaggattga cttgcgctgc
     6601 cctacctctc actagtgagg ggcggcagcg catcaagcgg tgagcgcact ccggcaccgc
     6661 caactttcag cacatgcgtg taaatcatcg tcgtagagac gtcggaatgg ccgagcagat
     6721 cctgcacggt tcgaatgtcg taaccgctgc ggagcaaggc cgtcgcgaac gagtggcgga
     6781 gggtgtgcgg tgtggcgggc ttcgtgatgc ctgcttgttc tacggcacgt ttgaaggcgc
     6841 gctgaaaggt ctggtcatac atgtgatggc gacgcacgac accgctccgt ggatcggtcg
     6901 aatgcgtgtg ctgcgcaaaa acccagaacc acggccagga atgcccggcg cgcggatact
     6961 tccgctcaag ggcgtcggga agcgcaacgc cgctgcggcc ctcggcctgg tccttcagcc
     7021 accatgcccg tgcacgcgac agctgctcgc gcaggctggg tgccaagctc tcgggtaaca
     7081 tcaaggcccg atccttggag cccttgccct cccgcacgat gatcgtgccg tgatcgaaat
     7141 ccagatcctt gacccgcagt tgcaaaccct cactgatccg catgcccgtt ccatacagaa
     7201 gctgggcgaa caaacgatgc tcgccttcca gaaaaccgag gatgcgaacc acttcatccg
     7261 gggtcagcac caccggcaag cgccgcgacg gccgaggtct tccgatctcc tgaagccagg
     7321 gcagatccgt gcacagcacc ttgccgtaga agaacagcaa ggccgccaat gcctgacgat
     7381 gcgtggagac cgaaaccttg cgctcgttcg ccagccagga cagaaatgcc tcgacttcgc
     7441 tgctgcccaa ggttgccggg tgacgcacac cgtggaaacg gatgaaggca cgaacccagt
     7501 tgacataagc ctgttcggtt cgtaaactgt aatgcaagta gcgtatgcgc tcacgcaact
     7561 ggtccagaac cttgaccgaa cgcagcggtg gtaacggcgc agtggcggtt ttcatggctt
     7621 gttatgactg tttttttgta cagtctatgc ctcgggcatc caagcagcaa gcgcgttacg
     7681 ccgtgggtcg atgtttgatg ttatggagca gcaacgatgt tacgcagcag ggcagtcgcc
     7741 ctaaaacaaa gttagccgta tgaacccgga atcggtccgc atttatctgg tcgctgccat
     7801 gggtgccaat cgggttattg gcaatggtcc cgatatcccc tggaaaatcc caggtgagca
     7861 gaagattttt cgcaggctca ccgagagcaa agtggtcgtt atgggccgca agacatttga
     7921 gtccataggc aagcccttac caaaccgcca cacagtggtg ctctcgcgcc aagctcgtta
     7981 tagcgctcct ggttgtgcag ttgtttcaac gctgtcacag gctatcgcca tcgcagccga
     8041 acacggcaaa gaactctacg tagccggcgg agccgaggta tatgcgctgg cgctaccgca
     8101 tgccaacggc gtctttctat ctgaggtaca tcaaaccttt gagggtgacg ccttcttccc
     8161 agtgcttaac gcagcagaat tcgaggttgt ctcatccgaa accattcaag gcacaatcac
     8221 gtacacgcac tccgtctatg cgcgtcgtaa cggctaacaa gtccgtcaac gggacaccca
     8281 aatgctgcgc atttgggttc cctcggctgc gcctcggcgc ccgttacgtc caacgttagc
     8341 caccaaggta ccatgaaaac catagccgca tatttagttc tagtattttt tgcaggcact
     8401 gcactttcag agtctatttc tgaaaattta gcttggaata aagaattttc cagtgaatca
     8461 gtgcatggtg tttttgtact ttgtaaaagc agtagtaatt cctgtacaac aaataatgca
     8521 acacgtgcat ctacggccta tattccagca tcaacattca aaattcccaa tgctctcata
     8581 ggccttgaaa ccggcgccat aaaagatgcg cggcaggttt tcaaatggga cggcaagccc
     8641 agagccatga agcaatggga aaaagactta acgctaaggg gcgctataca agtttctgct
     8701 gttccggtat ttcaacaaat tgccagagac attggcaaaa aaagaatgca aaaatacctt
     8761 aacctttttt catatggcaa cgccaatata ggcggaggca ttgacaaatt ttggctagaa
     8821 ggtcagctta gaatctcagc agtcaatcaa gttaaatttt tagagtcgct ttacctaaat
     8881 aatttgccag catctaaagc aaaccaactt atagtaaaag aggcaatagt tacagaagca
     8941 actccagaat atatagtgca ttcaaaaacc gggtattccg gtgtgggcac agaatcaaat
     9001 cctggtgtcg cttggtgggt tggttgggta gaaaaaggaa ctgaggttta cttttttgca
     9061 tttaacatgg acatagacaa tgagagtaag ttgccgtcaa gaaaatccat tccaacgaaa
     9121 atcatggcaa gtgaaggtat catcattggt ggctaacaag gcgctcaagg ccgtggctgc
     9181 gccactggac gtctccaatc ggcgcatgct tcgcattttg cgcgccgctt gtagccgccc
     9241 cttagctttg cgttagatgc actaagcaca taattgctca cagccaaact atcaggtcaa
     9301 gtctgctttt attattttta agcgtgcata ataagcccta cacaaattgg gagatatatc
     9361 atgaaaggct ggctttttct tgttatcgca atagttggcg aagtaatcgc aacatccgca
     9421 ttaaaatcta gcgagggctt tactaagctt gccccttccg ccgttgtcat aatcggttat
     9481 ggcatcgcat tttattttct ttctctggtt ctgaaatcca tccctgtcgg tgttgcttat
     9541 gcagtctggt cgggactcgg cgtcgtcata attacagcca ttgcctggtt gcttcatggg
     9601 caaaagcttg atgcgtgggg ctttgtaggt atggggctca taattgctgc ctttttgctc
     9661 gcccgatccc catcgtggaa gtcgctgcgg aggccgacgc catggtgacg gtgttcggca
     9721 ttctgaatct caccgaggac tccttcttcg atgagagccg gcggctagac cccgccggcg
     9781 ctgtcaccgc ggcgatcgaa atgctgcgag tcggatcaga cgtcgtggat gtcggaccgg
     9841 ccgccagcca tccggacgcg aggcctgtat cgccggccga tgagatcaga cgtattgcgc
     9901 cgctcttaga cgccctgtcc gatcagatgc accgtgtttc aatcgacagc ttccaaccgg
     9961 aaacccagcg ctatgcgctc aagcgcggcg tgggctacct gaacgatatc caaggatttc
    10021 ctgaccctgc gctctatccc gatattgctg aggcggactg caggctggtg gttatgcact
    10081 cagcgcagcg ggatggcatc gccacccgca ccggtcacct tcgacccgaa gacgcgctcg
    10141 acgagattgt gcggttcttc gaggcgcggg tttccgcctt gcgacggagc ggggtcgctg
    10201 ccgaccggct catcctcgat ccggggatgg gatttttctt gagccccgca ccggaaacat
    10261 cgctgcacgt gctgtcgaac cttcaaaagc tgaagtcggc gttggggctt ccgctattgg
    10321 tctcggtgtc gcggaaatcc ttcttgggcg ccaccgttgg ccttcctgta aaggatctgg
    10381 gtccagcgag ccttgcggcg gaacttcacg cgatcggcaa tggcgctgac tacgtccgca
    10441 cccacgcgcc tggagatctg cgaagcgcaa tcaccttctc ggaaaccctc gcgaaatttc
    10501 gcagtcgcga cgccagagac cgagggttag atcatgccta gcattcacct tccggccgcc
    10561 cgctagcgga ccctggtcag gttccgcgaa ggtgggcgca gacatgctgg gctcgtcagg
    10621 atcaaactgc actatgaggc ggcggttcat accgcgccag gggagcgaat ggacagcgag
    10681 gagcctccga acgttcgggt cgcctgctcg ggtgatatcg acgaggttgt gcggctgatg
    10741 cacgacgctg cggcgtggat gtccgccaag ggaacgcccg cctgggacgt cgcgcggatc
    10801 gaccggacat tcgcggagac cttcgtcctg agatccgagc tcctagtcgc gagttgcagc
    10861 gacggcatcg tcggctgttg caccttgtcg gccgaggatc ccgagttctg gcccgacgcc
    10921 ctcaaggggg aggccgcata tctgcacaag ctcgcggtgc gacggacaca tgcgggccgg
    10981 ggtgtcagct ccgcgctgat cgaggcttgc cgccatgccg cgcgaacgca ggggtgcgcc
    11041 aagctgcggc tcgactgcca cccgaacctg cgtggcctat acgagcggct cggattcacc
    11101 cacgtcgaca ctttcaatcc cggctgggat ccaaccttca tcgcagaacg cctagaactc
    11161 gaaatctaac gtccgttcgg gcatcgaggt ccatgtcggg gtgggacggg cccgtggctt
    11221 caagatcact tgcagtccga ccgcgatgtc ttggttgcgc gagaggttgt cgatatctgt
    11281 tgatttgcac ccaaatttga cccgggattt gcattgaatt ttgacccacc ccttgttgtc
    11341 agaattatgt ctcgattttc agtttgcggg tctgtttttc ctcctgctta ttctgagttg
    11401 aactgtgttt gaagcggtaa ctttcattgc cggtttccag gatgtggcag tggtgggtta
    11461 gtcggtccaa caacgctgtt gtcatctttt catcgccaaa cactcggctc cattccgaga
    11521 agctcaagtt ggtggtcagt atcacgctgg ttttttcgta cagctttgag agcaggtgaa
    11581 acagcagtgc cccaccggtt tggctaaaag gcaaatatcc cagctcatcc agaatcacca
    11641 aatcggcata caacagacgg tttgcgattt gtccctgacg cccagatgat ttctcttgct
    11701 ccagtgcatt gaccaaatcc acggtggaga agaaacgcac ccgtcggttc aagtgcatca
    11761 ctgcttgtgt accaatggct gtggccaggt gagtcttgcc tgtgcctggc ccaccaatca
    11821 gcaccacgtt ctgggcttgt tccatgaagt cgcaccggtg caattgtttg accgtggcct
    11881 cattaaccag gctttgactg aagtcaaagc ccactaagtc ccgatacacg gggaacttgg
    11941 ccacccgcaa ttgatagttc accgaacgta cttcacgctc tgccacttca gctttaatca
    12001 agctgtccag catgggcaag gcttgattaa atgctggtga attctgattg cccaactcct
    12061 caatggcgtg tgccatgcca aagagtttca aggatttgag gattctcaca tggccttcat
    12121 gctgcatcat gggctctcct taaactgtca tagcggttca cgttggcctg tggttccaat
    12181 gtcagcctta accccttggg aattggaatc ggtttgggtg gaggttcttc ggtcaaacgt
    12241 cccaacagat taagcacatg ctccttcgat ggcttgccac actccaatgc caattccaca
    12301 gcactgagta ccgcaccttc atcgtggtgc aatacaaggg ccagaatttc caccatgtca
    12361 cggtcaccgc cggggcgttg cagcaagatg gattgaagct tcttgaacgc gggtggcaat
    12421 tcagcaaatg gcgcaccatt gcgcaacgcc ccaggtttct tctgaagcac agacaagtaa
    12481 tggtgccagt cgtattgtgt gtggccacgc cgagcgtggc cactgccaaa caatcttgga
    12541 tgctcggcaa tgtgttggcc ttcggcagcc atcaccagct tgtctgcata aatccgaagg
    12601 ctgatggccc tgttggcgta actggcagga acgctgtagc gattgccctc gtggtgaaca
    12661 aggcaggttg aagtgactcg cttggtttgc tccacgaatg catcaaaggc attgggtagc
    12721 gccatcaact cgccttgttc atcggcaaag gcctcttgca cggtttggtc caattcgggg
    12781 tggcgcagct cagaccacag cgctttgcag cgatgctcaa gccacacatt caaatcagca
    12841 aggctttgaa agtctggtgc cccttgccac aggcgttggc gggaatcctg cacgttcttc
    12901 tcaatctggc ctttctccca acccgatgct ggattacaga actgcgcatc aaacaggtag
    12961 tggctgacca tggcagtgaa ccgctgattg accctgcgct ctttgccacg ccccaccgaa
    13021 tccacagcgg tcttcatgtt gtcgtagatg ccgcgcttgg gaatgccacc gaagatttga
    13081 aaggcatgcc agtgggcatc aaacagcatt tcatgttttt gctggtagta agcccgaagc
    13141 acaaaggccc ggctgtgggc caacttaaac tgggcaatct gaagtttgac ctgtttgccc
    13201 gctatgcggg caaagtcctc actccaatcg aattggaagg cttcgccaca agcaaagcgc
    13261 aaggggatga aacaaccctt gcccgaggtt tgcgccttga actgttcgga atctttccac
    13321 tgtcgggcaa aggcacacac tcggtcataa gacccggtaa agcccaaagc gaccaaatcc
    13381 cggtacatgc tgcgcaggtt tctgcgcagc ttctttgtct ttttgtgctc ggtggagagc
    13441 cactgcctta acttgggctc aaaaggactt aacttgccaa cgctgtctcg cgctgggtac
    13501 tgcggttcaa ccaccttgct ttgcaaatac ttgcgaacgg tgttcctgga caggccgctt
    13561 cgtcgggcta tttcccgaat cgacgcacca tcgcgaaaat gccagcgtcg aattgcgctc
    13621 aatatcgcca cgtttatcac tccttgattt ctcccgccat atccagacgg gaaacagtgt
    13681 catacgtggg tcaaatttcg acgcaaatct ttaccctaag ttggggtgcg gacaaaatct
    13741 tggactactt taggagtagt tcatgtattc gtatgaagat cgccttcgag ccgtgaggtt
    13801 gtacctgaag cttgggcgcc ggatgagcgc cacactacgg cagctgggat accccaccaa
    13861 gaactcgctg aaggcctggt tggcagaatt cgaacggaat caggatcttc gccgaggcta
    13921 tcaacggata aaacggcagt acaccgatga gcaaaagcaa cgggcagtag atcactatat
    13981 cgaacaaggc tactgcctga gtcacacaat ccgaagcctg ggctacccaa gccgcgaggc
    14041 cttgcgtgcc tggatccgtg atttacgccc tgaattcgct aggacggtcg tcggcagcag
    14101 cgctcccaca gtcgcccgct ctcgcctcga gaagcagcaa gccgtcattg cactgaacct
    14161 gcgcgtaggt tcggcaaagg atgtggccga cactgtcggt gtatcgcgac caacgttgta
    14221 taactggcag catcgattac ttggcaaagt gcccctaaaa cccatgacaa agaagaaagg
    14281 tgacacctcg ctcgagcagc ggcatgaggc actactcagg gaactggccg aactggagag
    14341 ccagaaccag cggcttcgca tggagaatgc aattctggag aaggcgagtg aattgataaa
    14401 aaaagacatg ggcatcaacc ccctcgaact gacaagccga gaaaaaacga aggtggttga
    14461 tgccctcaga gtcacgtttc cattagccaa tctgttgtgc ggcctgaagc tggcgcgcag
    14521 cacatacttc tatcaacgcc tgcggcagac gcggcccgac aagtacacgc aggtgcgtga
    14581 ggtcattcgg actatcttcg aggacaacta ccgctgctat ggctatcgac gcattgatag
    14641 tgccttgcgc cttggtggca tgcgtgtgtc cgagaaggtc gtgcgtcgct tgatggcgca
    14701 agagcgtctg gtcgtgagaa caccgcgccg ccggcgcttc tcggcgtatg ctggcgaccc
    14761 gacaccagcg gtcccgaatc tgctgaatcg cgactttcac gcgtcggcgc cgaatacgaa
    14821 atggttgacc gatctgacgg aaatacacat tccggcaggg aaggtctacg tctcgccgat
    14881 cgtcgattgc ttcgatgggc tggtggtggc ctggaatatc ggcaccagcc cggatgcgaa
    14941 cctggtcaat accatgctgg atcacgcggt acggacactg cgacccggtg agcatccggt
    15001 tatccattcg gacaggggct cgcattatcg ctggcctgcg tggatccgcc gcactgaaaa
    15061 tgcccaatta acgcggtcga tgtccaaaaa gggctgctcg ccagacaatg ctgcatgcga
    15121 gggctttttc ggacgattga agaccgaact aatctacccg aggaattggc agcacgtgac
    15181 gctgaaagac ctcatgacgc gaatcgatgc ctatatccac tggtacaacg agcgccgcat
    15241 caaagtgtcg cttggcgggc gtagtcccat cgagtatcgt catgcggtcg gattgatgtc
    15301 cgtataaacc gtccaagaaa tcgtccgcac ccccagtggg tcaattttag atgcaactca
    15361 acaggccatg ctgagtgtgc gatggttgat cgcttcctcg ccgctctcca cggcgacgat
    15421 ggccgccgcc atcagcaagt gcgccagttc ccctatggtg ccctcgctgc gtgtgagcag
    15481 gtagcgagcc atgtccagcg tggcaattgg ggaaggccgg cgcagcggga gcgaagcggc
    15541 gaagctggcc agcagtgagc agcaatcgtc gttggcctcc cataccggca gcatcatcgg
    15601 ctcgaagcga ttttccaact ggtcatcgga gcggatggct aggtaggcgt cgcgcgtgcc
    15661 taccccaacc aacgggatgc gcagttcgtt gccgaggaag cgcagcaggt tgaggaattc
    15721 ccggcggttg acgctgttgc cggccagcac gttgtgcagc tcgtcgatca ccagcatgcg
    15781 cacgccgacc ttgcgcagca gtgccagagc cagttgctcc atttccggca accgtgggcg
    15841 tgggcgcagc ggcgcgccca tcgcggcgag cagcgcgacg tagaagcgga tcacggacgg
    15901 ctcggacggc atctgcacga ccaacaccgg gatgtgctcc tggtcggcgt cggagctggc
    15961 cgggtgggtg cggcggaact tctcgacgat catcgacttg ccattgttgg tcgggccaac
    16021 cagcagcagg ttgggcatgc gttgcttgtt tggccacgca taaagggctt ccagccggtt
    16081 cagcgcctcg actgcgcgcg gatagccgat ccagcggtcg gcgcgaaggc gctggatgcg
    16141 ctcgtccgcc ggaagacggg ccaagccctg ggccgccggc agcaggtggg acaggtcgat
    16201 gatgggatat tcgtccacgg ctaccactcc tcaatctggt cgaacggttt ggcgggtggc
    16261 aagttgtctg cctgcgggtc ggcaatatcc gtatccggcg gaacgggctt gtccggccga
    16321 gctgatgtct tgaggtgctg gcggcgatcc gcgtcacgcc gcgccttgcg tgtggccttc
    16381 tgcgcgctgg tcacaatctc acgcatctgg ccgatcatgc ggaacagcgc cgactcatcc
    16441 acctgttcgc gcccttgctg ccgcagtttc gccagcgcct gccgttgttc ccagagggtg
    16501 acagccggat gcgacaaggt acggtaggga atttccaggt aatgctgtcc ctccggttcc
    16561 aggacccaga tacggctgat gtcgcgcgga tcgcgccgga tcagaaagga cggccagcgt
    16621 tcacgccgcg caatccacgg cttgagcgca tcggcgtagt agtggatgtg gtcgatgaca
    16681 aagccggtgc gggtcagcgt gcgccggagg atcggcagaa aatcgaccag gaacgaagta
    16741 gcgcgtgtga cgacggccgg tacgccgaca cgcgccacgg cctcggccca gcgcgcggcc
    16801 ggcggttgga gcaggccgtt gtgcaccgaa ccgtggtagg tgccgaccgc caatgtgagc
    16861 cagcgctcta gctcgcgcag cgtcagggcg gccttgtttt cggaatcgta gtcgccgcgc
    16921 tggtcagggt tggagaaggt cgttcccggc agttcgtcgt gaatcatctg catcgccgtg
    16981 ccgatgatcc gttccacgat gccgccatag tgcggctgtc ccagcgggcg atagtccagc
    17041 cggatgccat gctgctcgca accccggcgc agggcctcgc tcttgaactc ggccgcgttg
    17101 tctaggtaga gcagcaaggg cttgccgctc atctgccaat ccatttccac gttcagtcct
    17161 tccagccaag ggcgcttgtc gcaggcgaca tgcacgaggc acaggccaac cgaaacggca
    17221 gacggcgctt ccagcgtgac gaccatgccg agcacgcagc gggtgaacac gtcgatggcg
    17281 agggtcaggt acgggcggcc aataggttgc cggtcgcggt catcgaccac gatcaggtcg
    17341 atgaccgtat ggtctatctg cacctgctcc agcggcgcgg tcacggcagg aggctcgccg
    17401 cccacacctt gtaggtcacg agcggcatcc tggccttccc gccggcggat gaccttgcgc
    17461 gggtcaaggc tagcgatccg taaggccacg gtattgcgcg ccggcactcg cagtttttga
    17521 gccttgcaca cctgagtgac ttcgcggtga aaggccgcta ggctgcgctt ctgcttggtc
    17581 aggaaccgct tttgcagtag ctcgtggatg acgcgctcga ccggttccgg caagcgcccc
    17641 ttacctttac ctccaccgga ctggccgggc accagatccg tcacgaggcc gctgccttgc
    17701 cgggcacgcc ggatcagaac gtatacctgg cgccgagaca agcccagcgc ctgagccgcc
    17761 atatcggccg cttcgtgccc gaccgtctcc gactgcgcca acggactgat gatctccgca
    17821 cgacggcgcg cacgctccca agcctcatca ggcagagtgg ccacgccttg ttctggaatc
    17881 cgtggggtgt ccgtcgccat gctcacctcg ctttggtgca cacgagtatt gagcatagtc
    17941 gagattggtg cagatcactt ctgatattga actgtcagga gctggctgca caacagccat
    18001 tacgcccaat caactggtgc agtcgtcttc tgaaaatgac atccatgccc agcccgtgcg
    18061 cgagctggat caccgcccgc acgatagttt ggtcacgggc atcatccggg agcctggcga
    18121 caaaggattg gtcgattttc aatgtggtga tggggcagca tttcagatgt tgcaggcagg
    18181 aatagccggt gccgaagtcg tcggcggcga agcgcacgcc gatggcgcgc aaggcgtcga
    18241 aactggcgaa cagggctgga ttgccgaatg cgaccgattc ggtcagttcg atctccagaa
    18301 gctcggcggg cagggccata tcggccagca cccgctttac ctcgtcgtcg aacgttggcc
    18361 caacctggct ggcggacaca ttgatggcaa gacggaacgg ttgccatgcc ggtccttgcc
    18421 acttgtgcat ctggcgacag gcctcgccca gcacccacgc gcctatttcc ggcatcaggc
    18481 cgaacgactc ggccagcggc aggaactggc cgggcggcaa caggccaagc ctcggatgcc
    18541 gccagcgcat caacgcttcc gcgccagcga tccggtgatc gcgcagatcg accagcggct
    18601 ggtaatgcag gtcaagctgt ccgcgcgccg ccgcctgcgc caactcggcc gccgtccatc
    18661 cggcgggctg cgaactcgtc atgatccgcc ccggaaggcg cgcagcagcc gcgttacggc
    18721 cagaacgaac aagccggtca gcgcgagcgc ggcaacaccc caatgctcgc caaggaaggc
    18781 accggcggtc gtcccggcca gcacggcggc gagaatcggc agatggcagg ggcaggtcaa
    18841 cacggccagc gcaccccaca ggtagccgga aacgggttgg cgcgtctcgg gcggcagttt
    18901 gtcaggggcg ttcacggcaa tgcctcctcg tgcgcccgct cggctggcat ggaggccagt
    18961 tgcgcgtcca gatgggccaa cgccgcgcgc cgccgctcga ccaactggcg cagcacggca
    19021 agctgcgctg cggcttgtgc gccgtccgct gcgtcgagcg cacggcacag ccgcgccagg
    19081 gcatccaggc cgatacccgc ctcgaaggcc gcgcgcacga agcacagccg ttgcaaggcc
    19141 gcatcgtcga acacgccgta gccgcccgtg gtgcaggcca ccggccgtaa caagccgcgc
    19201 accaggtagt cgcgcacgat atgtacgctc accccagcgt tatgggccag ttgcgatacc
    19261 gtgtaggcgc tcatcgcaca cctccttgtc ctcacccggc gcagcaggaa agctgcttca
    19321 catccttgtt gaaggtctgc gccgcgagct tcaacccttc gaccatcgtc aggtagggga
    19381 acaactggtc ggccagttcc tgcaccgtca tccggttgcg aatcgccagt gcggccgtct
    19441 ggatcagttc gcccgcttcc ggggccactg cctgcacgcc gatcagtcgt ccgctgcctt
    19501 cttcaaccac cagtttgatg aagccgcgcg tgtcgaagtt ggcgagcgcg cgcggcacgt
    19561 tgtccagcgt tagcgtgcga ctatcagttt tgatgccgtc atggtgcgct tccgcctcgc
    19621 tgtagcctac ggtcgccact tgcgggtcgg tgaacaccac ggccggcatc gcggtcaggt
    19681 tcagggccgc gtcaccgccg gtcatgttga tcgcggcgcg agtgccggcc gctgccgcca
    19741 catagacgaa ctgcggctgg tcggtgcagt cgcctgcggc gtagatgtgt tccacgcttg
    19801 tacgcatgcc ggggtcgatg acgatagcgc cttgcggggt gagcgtgacg cccgtcgcat
    19861 ccagtgccag cttgcgtgtg ttgggcgcgc ggccggtggc gaccagcagc ttgtcggcgc
    19921 gcagttcgcc gtgcgccgtg gtgagcacga attcgccgtc cccttcacca ttgatatacg
    19981 cgacctggct ggcctgggtg tgttccctca cctcgatgcc ctccatgcgg aatgcggccg
    20041 tgacggcttc gcctatagct gggtcttcgc ggaagaacag cgtgctgcga gccaggatcg
    20101 tcaccttcgc tccgagtcgg gcgaacgcct gcgccagctc cagcgccacc actgatgagc
    20161 caatcacggc caggcgctta ggaatcgtct cgctgaccag cgcttcagtg gaagtccagt
    20221 acggagtgtc tttcaggccg ggaatcggcg gcacggccgg gctcgcgccg gtggcgatca
    20281 ggcagcggtc gaatgccacc acgcgctcgc cgccgtcgtt gagttgcacg atcaggttgc
    20341 gattgtcctt aaagcgggcg gagccgtgca gcacagtgat cgccggattg ccctccaaga
    20401 tgccttcgta cttggcgtgg cgcagttcat cgacgcgggc ctgctgctgg gccagcagcg
    20461 ccgtgcgctg gatggtcggc gtggtagcgg cgatgccgcc atcgaacggg ctttcccggc
    20521 gcagatgggc gatatgggcg gcgcggatca tgatcttgga cggcacacaa ccgacattga
    20581 cgcaggtgcc gccgatggtg ccgcgctcga tcagcgtgac acgtgcgcct tgctcgacgg
    20641 ccttcagcgc cgctgccatc gcggccccgc cgctgccgat gacggcgata tgcaatgcgc
    20701 cgctgctacc cgtcttgtcg tttctgccca gcagatcgcg catcttgtcg agcaatccgc
    20761 ccggcgtcga aactgagggg gcatcggcca gcgtggcccg ataaccgagt ccagctacag
    20821 cggccgtcag cgcgtcgggt gacgtgccga cctcaatggc gagcttggcg ctgcccttgg
    20881 cgtaggagac atccgctgat tgcacgccgg gcactttctc cagggcgtcc ttgacatgca
    20941 ctgcgcacga gtcgcaagtc atgccggtga ttttgagagt gctcatacca tcgttcctta
    21001 ttcgtgtggg ccgccgtgtc gcacggtcag ccgtctttca caagcgcttg gcggggagtt
    21061 cgcagccgtc cggtccgcaa cggcgatgcg ccggcgacac gaagtcccag atcgacaccc
    21121 caatcatcaa ggccaggccg acgtacatca ggttcgccgt ccaccagttg ccgagcagcc
    21181 agaccgtggc cgcaaacacg atggccgggc cgatcatgcc gagcagactg cgcagccatt
    21241 gccgatgact gaaccaaccc agcgcgttcg ccaggaaggc cagcgcggca aacagcggca
    21301 gcaggcggct gatgaacagt ccctcgtact ggctcaagaa gcccagcccg atggccgcgc
    21361 cgaagctggc gagggctgga aagcaggcgg cgcagcccat cgcggaaacg acgctgccga
    21421 gcgcgccggt tttatcggca atgcgtgtca tcagtcccat gaagcggctc tcgctgttgt
    21481 cgttggcttg ctggctcact gcttgacgct ggacggatag ccggcgtctg cggtggcctt
    21541 ggtcagcttc tgtacgctgg ccttggtgtc gtcaaaagtg acgacggcct cgcgcttctc
    21601 gaagcccaca tcgaccttgc tcacgccttc gaccttggag agcgctttct tgactgtgat
    21661 cgggcaggcg gcgcaagtca tgccgggaac cgctagcgtg acggtctggg tagcggccca
    21721 caccggggca acagcggcgg cgagggcaag ggaggcaaac agtttcttca tgatgaactc
    21781 ctggttaata gaaaaatgga acgacatagg gaaatccaag cgcgaccagg accagcacgg
    21841 ccacgatcca gaaaatcagc ttgtaggtgg cgcgcacctg cggaatcgcg cagacctcac
    21901 ctggcttgca tgcctgcacg ggccggtaaa tccgcttcca ggcgaagaac agcgccacta
    21961 gcgccgcgcc gatgaacaac ggtcgatagg gttccagcac cgtcaggttg ccgatccaag
    22021 caccggagaa gcccagggcg accagtacta gcggccccag gcagcaggtc gatgcaagaa
    22081 tggcggccag cccgccggcg aagagcgcac cgcgcccgtt ttgtggttca gacatacgtt
    22141 ggcccggtaa tgactccaac ttattgatag tgttttatgt tcag
//
LOCUS       DADKRT010000437        11188 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.guided.143, whole genome shotgun sequence.
ACCESSION   DADKRT010000437 DADKRT010000000
VERSION     DADKRT010000437.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11188
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.guided.143"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            complement(37..603)
                     /locus_tag="JQ356_004460"
                     /pseudo
     CDS             complement(37..603)
                     /locus_tag="JQ356_004460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            complement(822..1799)
                     /gene="epmA"
                     /locus_tag="JQ356_004461"
     CDS             complement(822..1799)
                     /gene="epmA"
                     /locus_tag="JQ356_004461"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY4624295.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            2124..3932
                     /gene="frdA"
                     /locus_tag="JQ356_004462"
     CDS             2124..3932
                     /gene="frdA"
                     /locus_tag="JQ356_004462"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY4624296.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRMAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3925..4659
                     /locus_tag="JQ356_004463"
     CDS             3925..4659
                     /locus_tag="JQ356_004463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY4624297.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4670..5065
                     /gene="frdC"
                     /locus_tag="JQ356_004464"
     CDS             4670..5065
                     /gene="frdC"
                     /locus_tag="JQ356_004464"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY4624298.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            5076..5435
                     /gene="frdD"
                     /locus_tag="JQ356_004465"
     CDS             5076..5435
                     /gene="frdD"
                     /locus_tag="JQ356_004465"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY4624299.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5498..6631
                     /gene="blaEC"
                     /locus_tag="JQ356_004466"
     CDS             5498..6631
                     /gene="blaEC"
                     /locus_tag="JQ356_004466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY4624300.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6720..7253
                     /locus_tag="JQ356_004467"
     CDS             6720..7253
                     /locus_tag="JQ356_004467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HAY4624301.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(7250..7567)
                     /locus_tag="JQ356_004468"
     CDS             complement(7250..7567)
                     /locus_tag="JQ356_004468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY4624302.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7749..7895)
                     /gene="ecnB"
                     /locus_tag="JQ356_004469"
     CDS             complement(7749..7895)
                     /gene="ecnB"
                     /locus_tag="JQ356_004469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY4624303.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(8006..8131)
                     /gene="ecnA"
                     /locus_tag="JQ356_004470"
     CDS             complement(8006..8131)
                     /gene="ecnA"
                     /locus_tag="JQ356_004470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY4624304.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(8183..8749)
                     /gene="efp"
                     /locus_tag="JQ356_004471"
     CDS             complement(8183..8749)
                     /gene="efp"
                     /locus_tag="JQ356_004471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY4624305.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8791..9840
                     /gene="epmB"
                     /locus_tag="JQ356_004472"
     CDS             8791..9840
                     /gene="epmB"
                     /locus_tag="JQ356_004472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY4624306.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            10214..11083
                     /locus_tag="JQ356_004473"
     CDS             10214..11083
                     /locus_tag="JQ356_004473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624307.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
BASE COUNT         2933 a         2831 c         2788 g         2636 t
ORIGIN      
        1 atcatacact aaatcagtaa gttggcagca ttacccgaaa tgcccaccat ttaataacaa
       61 aatagtaatg cttactaaca gcaatactaa attcagacac attactgcaa taccgcccac
      121 cgcagtaatg cgggcaattt tattaatccc ctttgaagca acgacggtga ccagaatcat
      181 ccatgctact gccagcagac caaccacctg cgtaggctcc agtccggcaa tacgccagtg
      241 ctgggtcatg tcgctaccat agaggaatgt tgagaacggt acccaaactt tcgcggaggt
      301 actcaccatc cagatgatat aagaggaaaa ccacataaac gtaccaatga aggcaaaacg
      361 tggtccgaca ctattattca tccaggaata gataccacct tcttctttgc gataagcagc
      421 tcccatttca gccatcatta aggcgaatgg aataaagaat aacaatgcag aaaatatata
      481 aaagggaatc gcactataac ccattaagta ataagccgat gggctattgg caaatccaaa
      541 tacggaagta aagatcatca atatgagtcc tatcagactc atctttttta tcgtgtgagg
      601 catgaaacca tccttcattt cagcgcgtgt ataacacgtg cccactgaac tgcactgcgc
      661 aacattgagc aggcagcgta aaaaccaata cagaattgat acccggatga tatcaaatat
      721 ccagtcttaa attgtggcct ttaacggaaa aatgaaaaca tatgctacag aatggcgctt
      781 atcacgccat tcttcgctgt taattcagta atttttcaga attatgcccg gtcaacgcta
      841 aaggcgatga cttcagccag tgtctccgcg cccagcgcca acatcaccag acgatcaaca
      901 cctaatgcca cgccggaaca gtcaggcata ccgactttca aggcttcaat cagattctgg
      961 tcaatggggt gctgcggcaa accgcgcgcc gcgcgcttac ggttatcttg ttcaaagcgt
     1021 tgttgctgct cacgggcatc cgttaattca tggaaaccat tcgccagctc aataccttta
     1081 taataaacct caaagcgttc agcgacccga tgatcttcgg tactgatttg cgccagtgat
     1141 gcctggctgg ctggaaagtg gtacacaaag gtcggttttt ctttgccaat atttggctct
     1201 acgccaaagg taaacagcaa ttgtagcaac gtgtcgcggt cttcttcggt atcagcaacg
     1261 ttactcaaat ccagtttcgc tgcgacttcc cgcagttgcg ttttgtcggc agagagcggg
     1321 tcaatttcca gataacgcaa gaaagcttgt tgataagaaa ggctttctgc tgccgggcag
     1381 tccagcacct gttgtaagag atcgtccacc tcgttcatca accggtacat atcatagtgc
     1441 ggtcgatacc actcaagcat agtgaactca gggttgtgat aacgccccat ctcttcatta
     1501 cggaagctgc ggcacagctg gaataccggc ccacaaccgg caaccagcag gcgtttcata
     1561 tggtattccg ggctggtcat taaccagaga ttcatcccct gcgaatgccc ggggccaacg
     1621 aaacgtgtct caaacgggac caaatgaata tcggttaccg tcgcctggct catacaaggc
     1681 gtctccacct ccagcactcc acgatcagca aagaaacgac ggatctccgc cataatcgcc
     1741 gcgcgtttta ataagttagg aatggatgcg ctcggctgcc aggatgccgt ttcgctcata
     1801 gttaaatctc cagtttttga caagggcacg aagtctactc gcaacgcgac ggcgagacaa
     1861 attttacgca ggaatcaaac agcggtgggc agtgactaaa aaaagcacga tctgatggtt
     1921 tagtaattaa attaatcatc ttcagtgata atttagccct cttgcgcact aaaaaaatcg
     1981 atctcgtcaa atttcagact tatccatcag actatactgt tgtacctata aaggagcagt
     2041 ggaatagcgt tcgcagaccg taactttcag gcacttaccc tgaagtacgg ggctgtggga
     2101 taaaaacaat ctggaggaat gtcgtgcaaa cctttcaagc cgatcttgcc attgtaggcg
     2161 ccggtggcgc gggattacgt gctgcaattg ctgccgcgca ggcaaatcca aatgcaaaaa
     2221 tcgcactaat ctcaaaagta tacccgatgc gtagccatac cgttgctgca gaagggggct
     2281 ccgccgctgt cgcgcaggat catgacagct tcgaatatca ctttcacgat acagtagcgg
     2341 gtggcgactg gttgtgtgag caggatgtcg tggattattt cgtccaccac tgcccaaccg
     2401 aaatgaccca actggaactg tgggggtgcc catggagccg tcgcccggat ggtagcgtca
     2461 acgtacgtcg cttcggcggc atgaaaatcg agcgcacctg gttcgccgcc gataagaccg
     2521 gcttccatat gctgcacacg ctgttccaga cctctctgca attcccgcag atccagcgtt
     2581 ttgacgaaca tttcgtgctg gatattctgg ttgatgatgg tcatgttcgc ggcctggtag
     2641 caatgaacat gatggaaggc acgctggtgc agatccgtgc taacgcggtc gttatggcta
     2701 ctggcggtgc gggtcgcgtt tatcgttaca acaccaacgg cggcatcgtt accggtgacg
     2761 gtatgggtat ggcgctaagc cacggcgttc cgctgcgtga catggaattc gttcagtatc
     2821 acccaaccgg tctgccaggt tccggtatcc tgatgaccga aggctgccgt ggtgaaggcg
     2881 gtattctggt caacaaaaat ggctaccgtt atctgcaaga ttacggcatg ggcccggaaa
     2941 ctccgctggg cgagccgaaa aacaaatata tggaactggg tccacgcgac aaagtttctc
     3001 aggccttctg gcacgaatgg cgtaaaggca acaccatctc cacgccgcgt ggcgatgtgg
     3061 tttatctcga cttgcgtcac ctcggcgaga aaaaactgca tgaacgtctg ccgttcatct
     3121 gcgaactggc gaaagcgtac gttggcgtcg atccggttaa agaaccgatt ccggtacgtc
     3181 cgaccgcaca ctacaccatg ggcggtatcg aaaccgatca gaactgtgaa acccgcatta
     3241 aaggtctgtt cgccgtgggt gaatgttcct ctgttggtct gcacggtgca aaccgtctgg
     3301 gctccaactc cctggcggaa ctggtggtct tcggccgtat ggccggtgaa caagcgacag
     3361 agcgtgcagc aactgccggt aatggcaacg aagaggcaat tgaagcgcag gcagctggcg
     3421 ttgaacaacg tctgaaagat ctggttaacc aggatggcgg cgaaaactgg gcgaagatcc
     3481 gcgacgaaat gggcctagca atggaagaag gttgcggtat ctaccgtacg ccggaactga
     3541 tgcagaaaac catcgacaag ctggcagagc tgcaggaacg cttcaagcgc gtgcgcatca
     3601 ccgacacctc cagcgtgttc aacaccgacc tgctctacac cattgaactg ggccacggtc
     3661 tgaacgttgc tgaatgtatg gcgcactccg caatggcacg taaagagtcc cgcggcgcac
     3721 accagcgtct ggacgaaggt tgcaccgagc gtgacgacgt caacttcctc aaacacaccc
     3781 tcgccttccg cgatgctgat ggcacgactc gcctggagta cagcgacgtg aagattacta
     3841 cgctgccgcc agctaaacgc gtttacggtg gcgaagcgga tgcagccgat aaggcggaag
     3901 cagccaataa gaaggagaag gcgaatggct gagatgaaaa acctgaaaat tgaggtggtg
     3961 cgctataacc cggaagtcga taccgcaccg catagcgcat tctatgaagt gccttatgac
     4021 gcaactacct cattactgga tgcgctgggc tacatcaaag acaacctggc accggacctg
     4081 agttaccgct ggtcctgccg tatggcgatt tgtggttcct gcggcatgat ggttaacaac
     4141 gtgccaaaac tggcatgtaa aaccttcctg cgtgattaca ccgacggtat gaaggttgaa
     4201 gcgttagcta acttcccgat tgaacgcgat ctggtggtcg atatgaccca cttcatcgaa
     4261 agtctggaag cgatcaaacc gtacatcatc ggcaactccc gcaccgcgga tcagggtact
     4321 aacatccaga ccccggcgca gatggcaaag tatcaccagt tctccggttg catcaactgt
     4381 ggtctgtgct acgccgcgtg cccgcagttt ggcctgaacc cagagttcat cggtccggct
     4441 gccattacgc tggcgcatcg ttataacgaa gatagccgcg accacggtaa gaaggagcgt
     4501 atggcgcagt tgaacagcca gaacggcgta tggagctgta ctttcgtggg ctattgctcc
     4561 gaagtctgcc cgaaacacgt cgatccggct gcggccattc agcagggcaa agtagaaagt
     4621 tcgaaagact ttcttatcgc gaccctgaaa ccacgctaag gagtgcaaca tgacgactaa
     4681 acgtaaaccg tatgtacggc caatgacgtc cacctggtgg aaaaaattgc cgttttatcg
     4741 cttttacatg ctgcgcgaag gcacggcggt tccggctgtg tggttcagca ttgaactgat
     4801 tttcgggctg tttgccctga aaaatggccc ggacgcctgg gcgggattcg tcgacttttt
     4861 acaaaacccg gttatcgtga tcattaacct gatcactctg gcggcagctc tgctgcacac
     4921 caaaacctgg tttgaactgg caccgaaagc ggccaatatc attgtaaaag acgaaaaaat
     4981 gggaccagag ccaattatca aaagtctctg ggcggtaact gtggttgcca ccatcgtaat
     5041 cctgtttgtt gccctgtact ggtaaggagc ctgagatgat taatccaaat ccaaagcgtt
     5101 ctgacgaacc ggtattctgg ggcctcttcg gggccggtgg tatgtggagc gcaattattg
     5161 cgccggtgat gatcctgctg gtgggtattc tgctgccact ggggctgttt ccgggtgatg
     5221 cgctgagcta cgagcgcgtt ctggcgttcg cgcagagctt cattggtcgc gtattcctgt
     5281 tcctgatgat cgttctgccg ctgtggtgtg gtttacaccg tatgcaccac gcgatgcacg
     5341 atctgaaaat tcacgtgcct gcgggcaaat gggttttcta cggtctggct gctatcctga
     5401 cagttgtcac gctgattggt atcgttacaa tctaacgtat cgccaatgta aatccggccc
     5461 gcctatggcg ggccgttttg tatggaaacc agaccttatg ttcaaaacga cgctctgcgc
     5521 cttattaatt accgcctctt gctccacatt tgctgcccct caacaaatca acgatattgt
     5581 gcatcgcaca attaccccgc ttatagagca acaaaagatc cccggtatgg cggtggcggt
     5641 aatttatcag ggtaaacctt attactttac ctggggctat gcggacatcg ccaaaaagca
     5701 gcccgtcaca cagcaaacgt tgtttgagtt aggttcggtc agcaaaacat ttacgggcgt
     5761 gcttggtggc gatgctattg ctcgagggga aatcaagtta agcgatcccg caacaaaata
     5821 ctggcctgaa cttaccgcta aacagtggaa tgggatcaca ctattacatc ttgcgaccta
     5881 caccgctggc ggcctgccat tgcagatgcc ggatgaagtg aaatcctcaa gcgacttgct
     5941 gcgcttctat caaaactggc agcctgcatg ggctccagga acacaacgtc tgtatgccaa
     6001 ctccagtatc ggtttgttcg gcgcactggc tgtgaagccg tctggtttga gttttgagca
     6061 ggcgatgcaa actcgtgtct tccagccact caaactcaac catacgtgga ttaatgtacc
     6121 gcccgcagaa gaaaagaatt acgcctgggg atatcgcgaa ggcaaggcag ttcatgtttc
     6181 gccaggggcg ttagatgctg aagcttatgg tgtgaagtcg accattgaag atatggcccg
     6241 ctgggtgcaa agcaatttaa ccccccttga tatcaatgag aaaacgcttc aacaagggat
     6301 acaactggca caatctcgct actggcaaac cggcgatatg tatcagggcc tgggctggga
     6361 aatgctggac tggccggtca atcctgacag catcattaac ggcagtgaca ataaaattgc
     6421 actggcagca cgcccggtaa aagcgattaa gcccccaact cctgcagtac gcgcatcatg
     6481 ggtacataaa acgggggcga ccggcggatt tggtagctat gtcgcgttta ttccagaaaa
     6541 agagctgggt atcgtgatgc tggctaacaa aaactatccc aatccagcga gagtcgccgc
     6601 cgcctgtcag attctcaacg ctctacagta aaatttcatc gggtccgaat tttcggacct
     6661 tttctgcgct tttccttgct gtcatctaca cttagaaaaa aaccagtaag gaaacattta
     6721 tgcgcctgct ccctctcgtt gccgcagcga cagctgcatt tctggtcgtt gcctgcagtt
     6781 ctcctacgcc gccgcgtggc gtgacagtgg tgaataattt cgacgctaaa cgctatctcg
     6841 gtacctggta tgagattgcc cgttttgatc accgttttga acgtggactg gaaaaagtca
     6901 ccgcaacata cagtctgcgt gatggcggcg gcctgaatgt catcaataaa ggctataacc
     6961 ctgacagaga aatgtggcag cagagtgaag ggaaagcgta ctttaccggc gcaccaacac
     7021 gcgctgcgct gaaagtgtca ttctttggtc ctttctatgg cggttataac gtcattgcac
     7081 ttgatcggga ataccgccat gcgctggttt gcggcccgga ccgcgactac ctgtggatac
     7141 tctcccgcac gccaaccatt tctgacgaag tgaaacagga gatgctggca gtcgcgaccc
     7201 gggaagggtt tgatgtcagt aagtttattt gggtacagca gcccggtagt tagtgagtgc
     7261 tgagtttcag accaataatc cccaatacga ttaacgccag actcgccagg cgcatcgggt
     7321 tagcggactc accgagcagc acaatgccgg tgatagccgc gccgactgcg ccaatacccg
     7381 tccacacggc ataagccgtc cctactggta acgatttcat cgcccaggca agtagcgcca
     7441 tactgacaat catcgccgtc acggtaataa cactcggcgt caaacgacta aagccgtggg
     7501 tatatttcag gccaacggcc cataccactt ccagcagacc agcaataact aagataatcc
     7561 aggacatatc aggctccgga gaattggggc cgtccccggt gaaaagacgc gtttgcaggt
     7621 cgtcctgcaa agctgatggt tgaacggata ttttgccagg tggcagggga atttcaacta
     7681 ttaccttagt gactatcgca gaaaaaacaa acggcacgac acagctgtcg taccgttatt
     7741 gcttattgct attgctgcgc tttcgttgct gcgccagaaa tcgcgttacc gccatcagaa
     7801 atgtcttcac caacgccacg cgtggtgttg caggcagtta atactgttga aagcaccaga
     7861 acagaaaaga tcgctgcaat tgtcttcttc accataacgt cttcctttta ggtaatgtta
     7921 tttatgtttg cctatagcaa attaataata gacaacatcg ccaaaaatga cggaaatctg
     7981 atgatttttc ggaagagaag aaaaattagc tggcagcgcg agagatggag ttgccgagat
     8041 gtttgatgtc ttcgccgaaa ccgcgagcgg tgttacagcc cgtgagcagc gtactggcaa
     8101 gcaaaacaag aacgataagg cgtttcatca tctctgacct gaataagtga tggtgcagcc
     8161 tgcaggccgc accacaaccg cattacttca cgcgagagac gtattcacca gagcgggtat
     8221 ccactttgat gacttcgccg atttgtacga acagcggaac cttaaccaca gcgccagtag
     8281 acagggtagc cggtttgccg ccagtacctg cggtatcacc tttcaggccc ggatcggtat
     8341 caacgatttc cagttcaacg aagttcggcg gagtaacgga gatcggctga ccattccaca
     8401 gagttacgat acactctgcc tgatccagca gccatttagc gttatcgcca attgcttttg
     8461 catcagcaga cagctgctcg aaagtttcgt tgttcatgaa gtgccagaac tcaccgtcgt
     8521 tgtacaggta agtcaggttc atatcgacaa catcagcgcc ttcagcggaa tcagtagatt
     8581 tgaaggtttt ttctacgcga gtaccggtca gcagacgacg cagtttaacg cgagcaaatg
     8641 cctggccttt acccggtttt acgaattcac tcgcttcaac cgcgtaaggt tcgccgtcta
     8701 acatgatttt aagaccagca cgaaaatcgt tgctatagta cgttgccata aggccctctg
     8761 aaatttgtta attggtagct aagccacaaa atggcgcata ttgtaaccct aaatacccca
     8821 tccagagaag attggttaac gcaacttgcc gatgttgtga ccgatcctga tgaacttctg
     8881 cgtcttttga atatagacgc ggacgaaaaa ctgttggccg gacgcagcgc caaaaagctg
     8941 tttgccctgc gtgtgccccg ctcatttatc gatcgcatgg agaaaggcaa tccggacgat
     9001 cctcttttgc gtcaggtact tacctcgcaa gatgagtttg tcgtcgcgtc cggattctcc
     9061 accgacccac tggaagaaca gcacagcgta gtgcctggtt tgttgcataa ataccacaac
     9121 cgggcgcttt tgctggtcaa aggcggctgc gcggtaaatt gccgctattg cttccgtcgc
     9181 cacttcccct atgccgaaaa tcagggcaac aagcgtaact ggcagactgc acttgagtat
     9241 gttgctgcgc atccggaact ggacgagatg attttctccg gcggcgatcc gctgatggcg
     9301 aaagatcacg agctggactg gttgctcaca caactggaag ccatcccgca tatcaaacgt
     9361 ctgcggattc acagccgtct gccgattgtg atcccggcac gcatcacaga tgcgctggtt
     9421 gaacgctttt cacattctac gctgcaaatc ctgctggtga atcacatcaa ccatgccaat
     9481 gagatagatg aaacattccg tcaggcgatg gctaagttgc gccgggtagg cgttactttg
     9541 ctgaaccaga gcgttctgtt acgtgatgtg aacgataacg cacaaacgct ggcaaacctg
     9601 agtaatgcgt tgttcgatgc cggcgtgatg ccgtattacc tgcatgtgct cgataaagta
     9661 cagggcgcag cgcattttat ggtgagtgat gacgaagcac ggcagattat gcgtgagttg
     9721 ctgacattgg tgtcgggata tctggtgccg aaactggcgc gagaaattgg cggcgaaccc
     9781 agcaaaacgc cgctggatct ccagctacgc cagcagttac tgattaaaca gggaagttaa
     9841 acattaaaat tgcctgatgc gctacgctta tcaggcctac atcgtgcatt gaaattgaat
     9901 ggatttgcaa tgaactgtag gccggataag gcgtttacgc cgcatccggc aagagcaaca
     9961 aacgcaagta cagcaacctg tcattaaact gagaaattta atctttgccc gttgcataac
    10021 ctttaattat tcatatgcat tgctgttgtt actttttata tagctaacac caataattaa
    10081 cctttctttt ctgtttatat agagtgagca cggctattta tgttatttta acaactatta
    10141 ctaccaagcc catttatctg gcttataaat taaaattaat tatttaattg agaaatggtt
    10201 agggagaacc tacatggcca taagcatcaa gggtgttaat accggtgtta ttcgcaagag
    10261 taataatttc attgcactgg cgctgaaaat taaagaacct cgcaataaag aatcgttgtt
    10321 ctttatgtct gtcatggaac tgcgcgacct gctgattgcg ctggaaagtc gtctgcatca
    10381 aaagcataaa ctggatgctg ctgcacgcct tcagtatgag caagctcgcg ataaagtcat
    10441 taagaaaatg gcagaaaaca tcccagaaat tctggttgat gagcttaaaa atgccgatat
    10501 taatcgtcgg gttaacacgc tggaacttac cgataatcaa ggcgaaaatc ttaccttcgt
    10561 attaacgcta catgacggta gcaaatgtga gttagtcgtc aatgagttgc agattgaaat
    10621 gctagcgcga gcaatcattc atgcaattaa taatgcggaa atgcgtgaac tggcattacg
    10681 tattacctca ctgttagatt tcctgccgtt atatgacgtt gactgccagg aaaatggcaa
    10741 tctggaatat gacacctatt cccaaccgga atggaaacat aacttgttcg accattatct
    10801 ggcggtgctt taccgcttta aagatgaaag tggcaaagaa caatttagcg gcgcagtggt
    10861 gaaaacgcgt gaagcaacgc cgggtaaaga agtagaggcg atcactcgcc gaatgcttga
    10921 tttcagccca cgactgaaaa aactcgcggg tgtgccatgt caggtctatg ttcgcaccgt
    10981 agcggcgaat aacgcccaac cgctaaccca ggatcaatgc ttacgcgcgc tgcatcactt
    11041 acgtgttcaa tccaccagca aaactgcacc acaggcgaaa taatctcatc tttgctaatg
    11101 cgaggctgga gccatccagc ctgaaatgac tgataacgtg atcgttggtc atgccggatg
    11161 cggcgtaaac gccttatccg gcctacaa
//
LOCUS       DADKRT010000438        10233 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.guided.158, whole genome shotgun sequence.
ACCESSION   DADKRT010000438 DADKRT010000000
VERSION     DADKRT010000438.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10233
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.guided.158"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            <1..651
                     /locus_tag="JQ356_004474"
     CDS             <1..651
                     /locus_tag="JQ356_004474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HAY4624308.1"
                     /translation="HPIIRGTNKVTGQSILQRHIASFSHHGLPQGSDDALRYIAEHDD
                     ALAFACINRQMIALRIMQQVKATGSPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNG
                     LVIIPGSRGDYSWIVQPVANEKTLHSLAHGAGRKWGRTECKWRLAAKYTVTQLSRTEL
                     GSRIICRDKQLIFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG"
     gene            648..1262
                     /locus_tag="JQ356_004475"
     CDS             648..1262
                     /locus_tag="JQ356_004475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY4624309.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1319..2776)
                     /gene="pepD"
                     /locus_tag="JQ356_004476"
     CDS             complement(1319..2776)
                     /gene="pepD"
                     /locus_tag="JQ356_004476"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY4624310.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3037..3495
                     /gene="gpt"
                     /locus_tag="JQ356_004477"
     CDS             3037..3495
                     /gene="gpt"
                     /locus_tag="JQ356_004477"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY4624311.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3587..4831
                     /gene="frsA"
                     /locus_tag="JQ356_004478"
     CDS             3587..4831
                     /gene="frsA"
                     /locus_tag="JQ356_004478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HAY4624312.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4889..5290
                     /locus_tag="JQ356_004479"
     CDS             4889..5290
                     /locus_tag="JQ356_004479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HAY4624313.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5329..6384)
                     /gene="phoE"
                     /locus_tag="JQ356_004480"
     CDS             complement(5329..6384)
                     /gene="phoE"
                     /locus_tag="JQ356_004480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HAY4624314.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6672..7775
                     /gene="proB"
                     /locus_tag="JQ356_004481"
     CDS             6672..7775
                     /gene="proB"
                     /locus_tag="JQ356_004481"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HAY4624315.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7787..9040
                     /gene="proA"
                     /locus_tag="JQ356_004482"
     CDS             7787..9040
                     /gene="proA"
                     /locus_tag="JQ356_004482"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HAY4624316.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9155..9230
                     /locus_tag="JQ356_004483"
     tRNA            9155..9230
                     /locus_tag="JQ356_004483"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9188..9190,aa:Thr,seq:cgt)
     gene            complement(9245..>10233)
                     /locus_tag="JQ356_004484"
     CDS             complement(9245..>10233)
                     /locus_tag="JQ356_004484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY4624317.1"
                     /translation="RKFSLQDSRGGSHKKSLDDDKSRIGFWLQHFAGMQLRDITESKI
                     YSAMQKMTNRRHEENWKLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAAE
                     REWKMLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSNI
                     INLEWQQIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESC
                     TKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQ
                     EMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNLSQSRNKERTNDV"
BASE COUNT         2455 a         2520 c         2665 g         2593 t
ORIGIN      
        1 caccccatta taaggggtac gaataaagta acggggcagt ctattttaca gcggcatatt
       61 gcctcgttct cgcatcatgg tttgcctcaa ggcagtgacg acgcgctacg gtatattgcg
      121 gaacatgacg atgcgctggc gtttgcgtgt attaatcgcc agatgatcgc tttgcgcata
      181 atgcaacaag ttaaggccac gggaagtccg gttctggatg tggcgcataa ctttgttagc
      241 gcgtgtcaaa tcggcgatca acagggctgg ttgcatcgta aaggtgccac gccggatgac
      301 aacggtctgg tgattattcc cggttcacgt ggtgattact cctggattgt acagcctgtt
      361 gcgaacgaaa aaacgctcca ctcgctggcg catggggcag ggcgtaaatg ggggcgcacc
      421 gagtgtaaat ggcgtctggc agcgaaatac acggtgacgc aactctcgcg gactgaactt
      481 ggcagtcgga taatttgtcg cgataaacaa ctcatctttg aagaagcgcc acaagcctat
      541 aaatcggctg aaagcgtggt gcaatgtctg gtgcaggccg gtttaattat tcctgtcgcg
      601 cggctgcgtc cggtgctaac gctcaaaaac agtggaggga aaaaaggatg atcttgctac
      661 aactctcctc agcgcagggg ccggaagaat gttgtctcgc agtgaaaaag gcgctggaca
      721 ggctaattaa agaagctgcc cgacaagacg tcgcggtaac ggtgttggaa acagaaacgg
      781 gccgctactc tgacacgctg cgttcagctc tggtttctct ggatggcgat aacgcatggg
      841 cattaagcga aagctggtgt ggcactattc agtggatttg tccgagtccg tatcggcctc
      901 atcatgggcg caaaaactgg tttctgggca ttgggcgttt taccgctgat gagcaggagc
      961 aatccgatgc gatccggtat gagacgctgc gttcgtcggg gccgggcggt caacatgtca
     1021 ataaaaccga ctcggcggta cgcgccacgc atttggcatc cggtattagc gtgaaggttc
     1081 agtcagagcg tagtcagcat gctaacaagc ggctggcacg attgctgatt gcctggaagc
     1141 tggagcagca gcaacaggaa aatagcgcgg tgctgaaatc gcagcggcga atgttccatc
     1201 accagattga acgtggcaac ccgagacgga catttacagg gatggctttt atcgaaggat
     1261 aatgaaggat gaaactgccg gaaggcgatt aaacgccatc cggcagcaaa tcaaataatt
     1321 acttcgccgg aatttctttc agcagttcag tcagcagtgt ccagtaatga cctacgcttt
     1381 cgatgtgaac ttgctcatcc ggagagtgtg gaccggtgat agttggcccg atagaaacca
     1441 tgtccatttc cggatacggt tttttgaaca gaccacattc caggcccgcg tggataatct
     1501 ggatgttcgg cgtcttgttg aacaggcgct gataggtttc acgtaccaga tgcatcaccg
     1561 gagaattagc gtccggctgc cagccaggat atgcgccttt cgcttcggtt ttcgcgccag
     1621 ccagtttacc cagcgaatcc agcatgctca ccacgtagtc tttaccgctg tcgatcagtg
     1681 aacggatcag gcagtgaatt tctacgttat tgtcagtcat ggtcaccaca ccgacgttca
     1741 gggaggtttc aaccacacct ttggctacat cggagttgcg gatcacaccg ttcggggtgg
     1801 cgttcagcag acgaataaag gtatcgcgag atttcgcaat cagggcagct ttatcgttcg
     1861 ctacagagtc cagcaacaag gccagatttt tctctttctc tgccagctcg tttttcagga
     1921 tctcctgata ggtattcacc agagatttca gtgcgtcgac tttatcagct gcgacagcaa
     1981 tggtcgcaaa ggcttcacgc gggatggcgt tacgcagtgt gccgccgttg aaatcgataa
     2041 ggcgcaggtc cagttcttct gcatgacccg ccaggaagcg caccagcagt ttgttggcat
     2101 tacccaggcc aacgtggatt tcaccgccgg agtgaccgcc tttcagacct tttaaggtta
     2161 acttgaaggt ttcaaaacca gctggaaccg cttcacgatc taaatgcagg ttggaggtga
     2221 agtcgatacc ccccgcacaa cccatgtaga tttcaccttc ttcttcggag tcggtgttaa
     2281 tcagaatatc agcctgcaac cagttgctct gtaagccaaa agcaccgtcc ataccggctt
     2341 cttcggtcat ggtcagcagc acttccagcg gaccgtgaac cacgttttcg tcagccagaa
     2401 ccgccagtgc agaggccata ccaatgccgt tatccgcacc cagcgtggtg ccgcgcgctt
     2461 taacccattc gccatcaata taaggctgga taggatcttt cgtgaagtca tgcacggtgt
     2521 cgttattttt ctgcggcacc atatcgaggt gggcctgtaa gacgaccggt ttacgatttt
     2581 ccatacctgc ggtagcaggt ttacgaatca ggatattacc tacctgatcg cgttcgacat
     2641 ggaaaccttt ctcttttgcc caaccaacaa tgtattcagc gagttgctct tcatgatagg
     2701 acgggtgcgg aatagaacag attttggcaa aaatatccca cagcggctgt ggagataatt
     2761 gagacagttc agacacgtta agtctccttg tcgatcaccc gcaaaacagt attgcaggtc
     2821 acagggttag cagaaaatgt tgtcaacaca agacaggctt gcgagatatg tttgagaata
     2881 ccactttatc ccgcgtcagg gagaggcagt gcgtaaaaag acgcggactc atgtgaaata
     2941 ctggttttta gtgcgccaga tctctataat ctcgcgcaac ctattttccc ctcgaacact
     3001 ttttaagccg tagataaaca ggctgggaca cttcacatga gcgaaaaata catcgtcacc
     3061 tgggacatgt tgcagatcca tgcacgtaaa ctcgcaagcc gactgatgcc ttctgaacaa
     3121 tggaaaggca ttattgccgt aagccgtggc ggtctggtac cgggtgcgtt actggcgcgt
     3181 gaactgggta ttcgtcatgt cgataccgtt tgtatttcca gctacgatca cgacaaccag
     3241 cgagagctta aagtgctgaa acgcgcagaa ggcgatggcg aaggcttcat agttattgat
     3301 gacctggtgg ataccggtgg tactgctgtt gcgattcgtg aaatgtatcc aaaagcgcac
     3361 tttgtcacca tcttcgcaaa accggctggt cgtccgctgg ttgatgacta tgttgttgat
     3421 attccgcaag atacctggat cgaacagccg tgggatatgg gcgtcgtatt cgtcccgcca
     3481 atctccggtc gctaatcttt tcaacgcctg gcactgccgg gcgttgttct ttttaacttc
     3541 aggcaggtta caatagtttc cagtaagtat tctggaggct gcatccatga cacaggcaaa
     3601 cctgagcgaa accctgttca aaccccgctt taaacatcct gaaacctcga cgctagtccg
     3661 ccgctttaat cacggcgcac aaccgcctgt gcagtcggct cttgatggta aaaccatccc
     3721 tcactggtat cgcatgatta accgtctgat gtggatctgg cgcggtattg acccacgtga
     3781 aatcctcgac gtccaggcac gtattgtgat gagcgatgct gaacgtaccg acgatgattt
     3841 atacgatact gtgattggct accgtggtgg caactggatt tatgagtggg ccacccaggc
     3901 gatggtgtgg caacaaaaag cctgtgcgga agaagatccg caactcagtg gtcgacactg
     3961 gctgcatgcg gctacgttgt acaacattgc cgcctatcct catctgaaag gagatgacct
     4021 ggccgagcaa gcgcaggctt tatcaaaccg cgcctatgaa gaggccgccc agcgtctgcc
     4081 gggcacgatg cggcagatgg agtttaccgt acccggcggt gcgcccatca ccggcttttt
     4141 gcatatgccg aaaggcgatg gcccgttccc gacagtatta atgtgtggtg gtctggatgc
     4201 gatgcagacg gactattaca gcctgtatga acgttatttt gcgccgcgcg gcattgtgat
     4261 gctgactatt gatatgccgt cggtgggctt ttcttcaaaa tggaagctca cccaggactc
     4321 cagcctgttg catcagcacg tcttaaaggc gctgcctaac gtaccgtggg tggatcacac
     4381 tcgcgtcgcg gcctttggtt tccgtttcgg cgctaacgtt gccgtgcgtc tggcatatct
     4441 tgaatcgccg cgtctgaaag cggttgcctg tcttggtccg gtagttcata ccctgttgag
     4501 tgattttaag tgccagcaac aggtgccgga aatgtatctt gacgttctgg cgagtcgttt
     4561 ggggatgcat gatgcttccg acgaagcgtt acgcgtggag ctgaatcgct attcattaaa
     4621 agtgcaagga ttgctgggac gtcgctgccc aacgccaatg ttatcaggct actggaagaa
     4681 cgatccgttc agcccggaag aggactcacg cttaatcacc tcatcatctg ctgacggtaa
     4741 attattagag atcccattta acccggtgta tcggaatttt gacaaaggtc ttcaggaaat
     4801 caccggctgg atcgaaaaac gcttgtgtta aaaatttgct aaattttgcc aatttggtaa
     4861 aacagttgca tcacaacagg agatagcaat gacgttaccg agtggacacc cgaagagcag
     4921 attgatcaaa aaatttaccg cactaggccc gtatattcgt gaaggtaagt gcgaagataa
     4981 tcgattcttt ttcgattgtc tggctgtatg cgtcaacgtg aaaccggcac cggaagtgcg
     5041 tgaattctgg ggctggtgga tggagctgga agcgcaggaa tcccgtttta cctacagcta
     5101 ccagtttggt ctgttcgata aagcaggcga ctggaagagt gttccggtaa aagatactga
     5161 agtggttgaa cgactggagc acaccctgcg tgagtttcac gagaagctgc gtgaactgct
     5221 gacgacgctg aatctgaagc tggaaccggc ggatgatttt cgtgacgagc cggtgaagtt
     5281 aacggcgtga gtgaaatgtg ccggatgcat cacatccggc aatatctatt aaaactgata
     5341 cgtcatccca atcgcgacaa tatcatcatt attaatattc aatttgttat cgctatccag
     5401 ttggttgatt ttataatcaa caaatgctga catatttttg ttgaaataat acgtagcacc
     5461 gacgtcgata taattaacca gatcttcacc accgatgccc tcaatatctt tccctttcga
     5521 taagacataa cccagcgatg gacgcagacc aaagtcaaac tggtattgag cgaccgcttc
     5581 aaagttctgt gtcttattgg caaagccgcc agttattggc gtcattttgc gagtttcaga
     5641 atagaaagtt gccagataaa tattattggc atcgtatttc agacctgttg cccatgcttc
     5701 tgcacgcttg cctgtgccac ggctttgcag gttctgctcg ttggtgcgat ctgagttggt
     5761 ataggcccca ctaatggcga aatcgctgcc gccaaagtca tatgtcaatg acgtgccgaa
     5821 gccatcgccg ttttgctttt taacgtcgcg gttttcgttt ttcccttgat attgcagggt
     5881 taagttcagg ccatcgataa cgccgaagaa gtcggtgttc cgatacgtcg ccagaccgct
     5941 ggcgcgtttg gtcataaagt tgtcggtctg cgccgaggag tcgccaccaa attccggaaa
     6001 catatcggtc caggcttcca cgtcatacaa cgcgcccagg ttacgaccat aatcgaaaga
     6061 acccaaatct ttatatttca acccggcaaa agcgagacgc gttttttgct gtgcagtatc
     6121 actctctgct ttattaccgg caaactctgc ttcccaacga ccataaccag tcagttgatc
     6181 gttaatttgt gtttcgcctt taaaaccaaa acggatataa ctctggtcgc catctttact
     6241 gtcgttatca ctcatataat gcatggcttt aactttgcca tagacatcca gtttattacc
     6301 gtctttgtta tatatttctg cggcctgtac ggatgcagat gccacaatgc ccatcaccac
     6361 taatgccaga gtgctctttt tcattttcat tcctgatttt aattaacgcg cgaatattca
     6421 gcgggagagc cccgttgaaa acaggaaagt ttttaacctg agattgttaa agatatatta
     6481 cagattaata atattcttaa aatgtggtaa tttattaaat ctgtaataaa agcgtaaaca
     6541 actgccgcta ggcttgctga tcccgcgcaa caaaacgcca tgctttgctc gcagatggtt
     6601 ggcaaccgac gacagtcctg ctaaaacgtt cgtttgatat catttttcct aaaattgaat
     6661 ggcagagaat catgagtgac agccagacgc tggtggtaaa actcggcacc agtgtgctaa
     6721 caggcggatc gcgccgtctg aaccgtgccc atatcgttga acttgttcgc cagtgcgcgc
     6781 agttacatgc cgccgggcat cggattgtta ttgtgacgtc gggcgcgatc gccgccggac
     6841 gtgagcactt gggttacccg gaactgccag cgactatcgc ctcgaaacaa ctgctggcag
     6901 cggtagggca gagtcgactg attcaactgt gggaacagct gttttcgatt tatggcattc
     6961 acgtcgggca aatgctgctg acccgtgctg atatggaaga ccgtgaacgc ttcctgaacg
     7021 cccgcgacac cctgcgtgcg ttgctcgata acaatatcgt tccggtaatc aatgagaacg
     7081 atgctgtcgc tacggcagag attaaagtcg gcgataacga taacctttct gcgctggcgg
     7141 cgattctggc gggtgccgat aaactgttgc tgctgaccga tcaaaaaggt ttgtataccg
     7201 ctgacccgcg cagcaatccg caggcagaac tgattaaaga tgtttacggc attgatgacg
     7261 cactgcgcgc gattgccggt gacagcgttt caggcctcgg aactggcggc atgagtacca
     7321 aattgcaggc cgctgacgtg gcttgccgtg cgggtatcga caccattatt gccgcgggca
     7381 gcaagccggg cgttattggt gatgtgatgg aaggcatttc cgtcggtacg ctgttccatg
     7441 cccaggcgac tccgcttgaa aaccgtaaac gctggatttt cggtgcgccg ccggcgggtg
     7501 aaatcacggt agatgaaggg gcaactgccg ccattctgga acgcggcagc tccctgttgc
     7561 cgaaaggcat taaaagcgtg actggcaatt tctcgcgtgg tgaagtcatc cgcatttgca
     7621 acctcgaagg tcgcgatatc gcccacggtg tcagtcgtta caacagcgat gcattacgcc
     7681 gtattgccgg acaccactcg caagaaattg atgcaatact gggatatgaa tacggcccgg
     7741 ttgccgttca ccgtgatgac atgattaccc gttaaggagc tggccgatgc tggaacaaat
     7801 gggcattgcc gcgaagcaag cctcgtataa attagcgcaa ctctccagcc gcgaaaaaaa
     7861 tcgcgtgctg gaaaaaatcg ccgatgaact ggaagcacaa agcgaaatca ttctcaacgc
     7921 taacgcccag gatgttgctg acgcgcgagc caatggcctt agcgaagcga tgcttgaccg
     7981 tctggcactg acgcccgcac ggctgaaagg cattgccgac gatgtacgtc aggtgtgcaa
     8041 cctcgccgat ccggtggggc aggtaatcga tggcggcgta ctggacagcg gcctgcgtct
     8101 tgagcgtcgt cgcgtaccgc tgggagttat tggcgtgatt tatgaagcgc gcccgaacgt
     8161 gacggttgat gtcgcttcgc tgtgcctgaa aaccggtaat gcggtgatcc tgcgcggtgg
     8221 caaagaaacg tgtcgcacta acgctgcaac agtggcggtg attcaggacg ccctgaaatc
     8281 ctgcggctta ccggcgggtg ccgtgcaggc gattgataat cctgaccgtg cgctggtcag
     8341 tgaaatgctg cgtatggata aatacatcga catgctgatc ccgcgtggtg gcgctggttt
     8401 gcataaactg tgccgtgaac agtcgacaat cccggtgatc acaggtggta taggcgtatg
     8461 ccatatttac gttgatgaaa gtgtagagat cgctgaagca ttaaaagtga tcgtcaacgc
     8521 gaaaactcag cgtccgagca catgtaatac ggttgaaacg ttgctggtga ataaaaacat
     8581 cgccgatagc ttcctgcccg cattaagcaa acaaatggcg gaaagcggcg tgacattaca
     8641 cgcagatgca gctgcactgg cgcagttgca ggcaggccct gcgaaggtgg ttgctgttaa
     8701 agccgaagag tatgacgatg agtttctgtc attagatttg aacgtcaaaa tcgtcagcga
     8761 tcttgacgat gccatcgccc atattcgtga acacggcaca caacactccg atgcgatcct
     8821 gacctgcgat atgcgcaacg cccagcgttt tgttaacgaa gtggattcgt ccgctgttta
     8881 cgttaacgcc tctacgcgtt ttaccgacgg cggccagttt ggtctgggtg cggaagtggc
     8941 ggtaagcaca caaaaactcc acgcgcgtgg cccaatgggg ctggaagcac tgaccactta
     9001 caagtggatc ggcattggtg attacaccat tcgtgcgtaa ataaaaccgg gtgatgcaaa
     9061 agtagccatt tgattcacaa ggccattgac gcatcgcccg gttagtttta accttgtcca
     9121 ccgtgattca cgttcgtgaa catgtccttt cagggccgat atagctcagt tggtagagca
     9181 gcgcattcgt aatgcgaagg tcgtaggttc gactcctatt atcggcacca tttaaatcaa
     9241 taagttacac atcattagta cgttccttat ttcttgactg ggacaaattt gggaccgatg
     9301 ggttcagaat cgagtctatt tgccgtgcgt gttcggtaag gtgattaggt gcgaggtgag
     9361 catatcgacg aaccatttcg atagactccc agcctcccat ttcctgtaac actgataacg
     9421 ggactccggc ttgaaccagc caacttgccc aggtgtgtct caagtcgtga aatctgaaat
     9481 catcaatacc tgctcgtctc agcgccgctt tccaggctgt gtttgcgtca taccgcatct
     9541 tcctgactgt tggcgctttc gttccgtctg gtttggtaca gctttcctta tacacaaata
     9601 cccaacggtg atgattcccg atttgttttt tcaatacgcg acatgcagta tcattcagcg
     9661 caacgccaat tgcgcggttt gatttactct cttccgggtt tatccatgcc acccggcgct
     9721 gcatgtctat ttgttgccat tcaaggttga tgatgttcga gcgtcttaag cctgttgcaa
     9781 gtgcaaattc aacaacagac tttaatggct ccggacattc atcaatcagc ctttgtgctt
     9841 catgaggctc cagccagcgg atccgtttat tctttggttg aggcacttta ataattggtg
     9901 ccttatccag cattttccat tcacgctctg cggctcttag cagggccttt ataaatgaaa
     9961 gatgcgtagc cttcgttgca acggacgctg gttttggcgt gtattctgga acaggtttcc
    10021 ctttttttct gcatgcttct gccctgagtt tccagttttc ctcatgacgc cggttcgtca
    10081 ttttctgcat tgctgaataa atttttgatt cagtaatgtc tcttagttgc attcctgcga
    10141 aatgttgaag ccagaatccg atccggcttt tgtcatcgtc cagtgatttt ttatgtgaac
    10201 cgccccggga atcctggaga ctaaacttcc tga
//
LOCUS       DADKRT010000439         6069 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.guided.218, whole genome shotgun sequence.
ACCESSION   DADKRT010000439 DADKRT010000000
VERSION     DADKRT010000439.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6069
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.guided.218"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            69..320
                     /locus_tag="JQ356_004485"
                     /pseudo
     CDS             69..320
                     /locus_tag="JQ356_004485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229779.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiation protein"
     gene            980..1795
                     /gene="sul2"
                     /locus_tag="JQ356_004486"
     CDS             980..1795
                     /gene="sul2"
                     /locus_tag="JQ356_004486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HAY4624318.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            1882..2184
                     /locus_tag="JQ356_004487"
     CDS             1882..2184
                     /locus_tag="JQ356_004487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017831680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HAY4624319.1"
                     /translation="MVRKYFGTDGIRGKANEGAMTAETALRVGMAAGRVFRRGDHRHR
                     VVIGKDTRLSGYMLEPALTAGFTSMGMDVFLFGPLPTTYRKNKRPFHPSPTALDRS"
     gene            complement(2078..2329)
                     /locus_tag="JQ356_004488"
     CDS             complement(2078..2329)
                     /locus_tag="JQ356_004488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001445143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624320.1"
                     /translation="MLRSQRRGRDPPCWLSEKEPLVGKRRVNFQRCWLPVSRIGLHRR
                     GVERVNCGPKLLDLGEKGVYSSYTLSAAGQKGIRPCPSR"
     gene            complement(2360..3853)
                     /locus_tag="JQ356_004489"
     CDS             complement(2360..3853)
                     /locus_tag="JQ356_004489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HAY4624321.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRVADEPATPAQRRASMTWAQRLKRVFNIDIETCSGCGGAM
                     KVIACIEDPIVIKQILDHLKHKAETSGTRALPESRAPPAELLLGLFD"
     gene            complement(3897..4286)
                     /locus_tag="JQ356_004490"
     CDS             complement(3897..4286)
                     /locus_tag="JQ356_004490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY4624322.1"
                     /translation="MSTELNSGTVGGFGHMGPNDPYNDGHSGSGSSGGSFNGGGNGGH
                     DNSSGSSYTASFGLITGRHPITVPGTKNINSVDLSAVINNIIHHEGARNNMYLDTANN
                     VRVGVTGTGWQCLATAGISAEGKRTFR"
     gene            4456..4944
                     /locus_tag="JQ356_004491"
     CDS             4456..4944
                     /locus_tag="JQ356_004491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011161230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entry exclusion protein 1"
                     /protein_id="HAY4624323.1"
                     /translation="MFCCYNTVHTGDTVTFMAWHTVQETLKLTGKSRSQLYRDMAKGL
                     VSYRTGKNDRREFETSELIRAYGELRTSETPKRHKEGHSKSVVSQAENAQLDVIQQKL
                     DALQQTVTLMLEDKMAREAENRLRNEEREQLQAEISRLADALAQEKKRGFWSRLFRSG
                     SE"
BASE COUNT         1439 a         1670 c         1593 g         1367 t
ORIGIN      
        1 tgactcgcta cgctcggtcg ttcggctgcg gcgagcggta ccggcttacg gacggggacg
       61 gaaatttcct ggaagatacc aggaagacac ttagcaaaga agagataagg ccacggcgaa
      121 gccgtttttc cataggctcc gcccccctga caagcatcgc aaaatctgac gctcaaatca
      181 gtggtggcga aacccgacag gactataaag atcccaggcg tttccccctg gtagctccct
      241 cgtgcgctct cctgttcctg cctttcggtt taccggtgtc attccgctgt tatggccgcg
      301 gtttctcatt ccacgcctga cactcagttc cgtgaaggca gttcgctcca agctggactg
      361 tatgcacgaa ccccccgttc agtccgaccg ctgcgccttg tccggtaact atcaacttga
      421 gtccaacccg gaaagacacg acaaaacgcc actggcagca gccattagta acaggagtgc
      481 acgagaagat agattaagag gtcttgaagt agaggcctga ctgcggctac actgaaagaa
      541 cagttttggt aatggcggtc tcgtgaaccc tgttaccggg ttaagcagtt ccccaactga
      601 cttaaccttc gaacaaaccg cctccccagg cggttttttc gtttacagag caagagatta
      661 cgattcattg aaaaggatct caagaagatc ctttgtagat tactatcaat taatcttccg
      721 aacatgacac cagtcactgt tgattacggt taaaccgctc cgtaacaggt ttccctcgta
      781 ttggtgactt gcagcaccaa agaagcaaaa aagataaata tatctactta ttgagagatg
      841 atatatttat ttccaaaatg ctacagatac atcatcatga aacggatcac cgcaaacagg
      901 ttactcgcct ggggattccc tttcgacccg agcatccgta tgagactcat gctcgattat
      961 tattattata gaagccccca tgaataaatc gctcatcatt ttcggcatcg tcaacataac
     1021 ctcggacagt ttctccgatg gaggccggta tctggcgcca gacgcagcca ttgcgcaggc
     1081 gcgtaagctg atggccgagg gggcagatgt gatcgacctc ggtccggcat ccagcaatcc
     1141 cgacgccgcg cctgtttcgt ccgacacaga aatcgcgcgt atcgcgccgg tgctggacgc
     1201 gctcaaggca gatggcattc ccgtctcgct cgacagttat caacccgcga cgcaagccta
     1261 tgccttgtcg cgtggtgtgg cctatctcaa tgatattcgc ggttttccag acgctgcgtt
     1321 ctatccgcaa ttggcgaaat catctgccaa actcgtcgtt atgcattcgg tgcaagacgg
     1381 gcaggcagat cggcgcgagg cacccgctgg cgacatcatg gatcacattg cggcgttctt
     1441 tgacgcgcgc atcgcggcgc tgacgggtgc cggtatcaaa cgcaaccgcc ttgtccttga
     1501 tcccggcatg gggttttttc tgggggctgc tcccgaaacc tcgctctcgg tgctggcgcg
     1561 gttcgatgaa ttgcggctgc gcttcgattt gccggtgctt ctgtctgttt cgcgcaaatc
     1621 ctttctgcgc gcgctcacag gccgtggtcc gggggatgtc ggggccgcga cactcgctgc
     1681 agagcttgcc gccgccgcag gtggagctga cttcatccgc acacacgagc cgcgcccctt
     1741 gcgcgacggg ctggcggtat tggcggcgct gaaagaaacc gcaagaattc gttaactgca
     1801 cattcgggat atttctctat attcgcggtt cagcaggcat gtcccctttg agggcgaccc
     1861 gacgacagga taatcgacct tatggtgcgc aaatatttcg gcacagacgg tattcgtggc
     1921 aaagccaacg aaggcgcgat gacggcggaa accgccttgc gcgtcggcat ggcggctggc
     1981 cgtgtctttc gtcgcggtga ccaccgccat cgtgtcgtga tcggcaagga tacgcgcctg
     2041 tcgggctata tgcttgaacc cgcgctcaca gccggtttca cctcgatggg catggacgta
     2101 ttcctttttg gcccgctgcc gacaacgtat aggaagaata aacgcccttt tcacccaagt
     2161 ccaacagctt tggaccgcag ttgactcttt cgacacccct gcgatgcaac ccaatccggc
     2221 tgacggggag ccagcaacgc tgaaaattta ccctcctctt tcccactagc ggctcctttt
     2281 ccgacaacca gcacggcgga tccctgccgc ggcgctgtga acgcagcatt ttgattggta
     2341 tcgttggcct tcaggctcgt cagtcaaaca gacccaggag cagctcagcc ggtggcgccc
     2401 ggctttcggg taacgccctg gtcccgctgg tttcggcttt gtgcttcagg tgatcaagga
     2461 tctgcttgat cactataggg tcttcaatgc aggcgatgac tttcatggcg ccgccgcagc
     2521 cgctgcaggt ctcgatgtcg atattgaaaa cacgcttgag ccgttgcgcc catgtcatcg
     2581 acgctcgccg ttgtgctggt gttgccggtt catcagccac cctgaccttg ttgcccctgc
     2641 cccgttttgc cggcgtgacc aacgcccggt gccgactgtt gggtgcgaac accccgtgga
     2701 agcgggttag gttgactctg ggcttcggta ccagggcggc cagccttgca atgaaatcca
     2761 atggttcgaa aatgacgtgc gtggtgccgt cccggtacgg cgtcttgagc tggtagcgca
     2821 cgttgccgcc tcgtgttaac gacagccgct tctcggatac cgccgggcgg ctgatgtacc
     2881 ggcacagccg ttcgagcttc ttgcgttcat cggccctggc cgccacgccg gcgtgcaggc
     2941 tggacccggc taccttgcca atcccgtcac cgaacggatc accactggtc ggcagagttt
     3001 gcaaagtgaa cacctttcgc cccgcctgtg aaccgacagc gatacggtaa gtgatcgagt
     3061 gccccagcag gggtgtcatc gggtcgtcat ccaccgcatc cgaggccaga tagctgtttt
     3121 cgacatcccg ttccagcagg ccttgccgtt ccagatagcg acccacccgg tgggcgatgg
     3181 tgtgcgtcag ctgggtgagc tctgggctgg tcggcgcctt gacccagcgg aaacgcgctg
     3241 agccgtggga ttgctcgaca tacacaccgt cgagaaacag catgtggaag tgaacattca
     3301 gattgagcgc cgatccaaaa cgctggatca gggtgaccgc gcccgtcttg gccacttggt
     3361 gggtatggcc cgctttcttg accaggtgcg tggcaatgac gcggtaaacg atgcccagca
     3421 cccaccccat gatctcgggc cggctggcaa acaggaaacg cagctgaaac gggaagctca
     3481 acacccactg acgcatgggt tgttcaggca gtacttcatc aaccagcaag gcggcacttt
     3541 cggccatccg ccgcgcccca cagctcgggc agaaaccgcg acgcttacag ctgaaagcga
     3601 ccaggtgctc ggcgtggcaa gactcgcagc gaacccgtag aaagccatgc tccagccgcc
     3661 cgcattggag aaattcttca aattcccgtt gcacatagcc cggcaattcc tttccctgct
     3721 ctgccataag cgcagcgaat gccgggtaat actcgtcaac gatctgatag agaagggttt
     3781 gctcgggtcg gtggctctgg taacgaccag tatcccgatc ccggctggcc gtcctggccg
     3841 ccacatgagg catgttccgc gtccttgcaa tactgtgttt acatacagtc tatcgcttag
     3901 cggaaagttc ttttaccctc agccgaaatg cctgccgttg ctagacattg ccagccagtg
     3961 cccgtcactc ccactcttac attgttcgca gtatctaggt acatgttatt gcgtgcacct
     4021 tcatgatgta taatgttatt aatgacagca gaaagatcga cagaattaat attcttcgta
     4081 cctgggacag ttatcgggtg tcggccagtg atgagaccaa aggatgcagt ataagatgaa
     4141 ccactactat tatcatggcc accattacca ccaccgttaa aactacctcc cgaacttcca
     4201 gagccgctat gaccatcatt gtaggggtca tttggtccca tgtgaccaaa accaccgaca
     4261 gtaccgctat ttaactctgt actcataaaa ttatcctctt tgacttttaa aaacagcaaa
     4321 aactgtattt ataacaatgt gtttatatac agtattcgaa atactacgcc cgtcaaaacc
     4381 acaccgtcaa caggtttttt gtgtattttt cacgcctcac gggcagcctc agaccttttg
     4441 tgttaaaaca gtaatatgtt ctgctgttac aatacggtac acacaggaga cactgtcact
     4501 tttatggcat ggcacacagt tcaagagaca ctgaaattaa caggaaagtc gcgctcgcaa
     4561 ttatatcgtg acatggctaa aggccttgtc agctatcgca caggaaaaaa tgatcgccgg
     4621 gagttcgaga ccagtgaact gattcgggcc tatggcgagc tgcgcacttc tgagacacca
     4681 aaaaggcaca aggagggaca ctccaaatct gtcgttagcc aggcggaaaa tgctcagcta
     4741 gacgtcattc agcagaaact ggacgctctg cagcagactg ttaccctaat gcttgaagac
     4801 aagatggcgc gggaagcaga aaaccgcctg cgaaatgagg agagggaaca actacaggcc
     4861 gaaattagcc gtctggctga cgcgctggca caggaaaaaa agcggggatt ctggtcgcgg
     4921 ctgtttcgct ccggttcaga gtaacagtgc aggtgactct gatttaccat aacatctgtt
     4981 atcagcaccg cctgagaggc cctcagggcg tttctgacgg gaaaccggta aaacaggcaa
     5041 caaaccaccc gaaaacccgc cagaaacgcg caggctctgt ttttacggca tgcatgagta
     5101 tgcgcacaag tgcatagcgc ggaaattcac accattcagc cggggtaagt cctgtttccg
     5161 gcgttcttcc catccgaaaa cggtgaacgg ggacgcaatt tattgcgtgg ccgtgaagcg
     5221 ttgccggcgc agccggaaaa cccgctgtca gcacgttcag gaagggggtg atgtacaaat
     5281 ggcacagagg atgaaagtga cgtatgagct gaaggaatga tgtaaaagtg atgtataagt
     5341 gatgtaaaag tgatgtatga actgaaggag cgatgtaatt ctgtagtcag gaagaataac
     5401 ccgttcatgc aggcatgaac gatacagtga ggaacgcttt ttttgtcacg atctcccctt
     5461 aacctgcgta aatcacccgc catggttgat tatttttcaa cctcaaaatg gtcatacacc
     5521 taacgcagcc gcgattttca tcgcaactgc atgaattaaa agaaaaaaaa ggaatatttc
     5581 gttttcacga gtaatacccg ggtattaaaa atccactgta attacatgaa aataaagaaa
     5641 taaaaggtaa taccggagta ttaccacgta cgcgggcaag cgaaaaagct ataacgcttc
     5701 ccggccgaca ggcgacccaa aatccacagg ggcatgcagg ttctcttcag taacctgcgc
     5761 cattaaatca aaaaggtcat attcgccggg aagctgcgta tcagtcgaat ccagttgttc
     5821 atcatattca gatggcatgg ggtgatatcc agtagctgag aggttgttag cgggtttcgg
     5881 ggcgcagccc tgaaccagtc atgtagcgct agcggagtgt atactggctt actatgttgc
     5941 cacgattgcg aaaatcagtg aagtgcttca tgtggcagga gaaaaaaggc agcaccggcg
     6001 cgtcagcaga atatgcgata caggagatat tccgcttcct cgctcactga ctcgctacgc
     6061 tcggtcgtt
//
LOCUS       DADKRT010000440         5665 bp    DNA     linear   BCT 05-MAR-2021
DEFINITION  TPA_asm: Escherichia coli strain YA00208201_EQA isolate
            SAMEA7177430-rid11448693.guided.228, whole genome shotgun sequence.
ACCESSION   DADKRT010000440 DADKRT010000000
VERSION     DADKRT010000440.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7177430
            Sequence Read Archive: ERR4452332
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000946661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000946661.1
            Genome Coverage       :: 138x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/02/2021 23:24:38
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,499
            CDSs (total)                      :: 4,445
            Genes (coding)                    :: 4,114
            CDSs (with protein)               :: 4,114
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 331
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 188 of 331
            Pseudo Genes (incomplete)         :: 77 of 331
            Pseudo Genes (internal stop)      :: 102 of 331
            Pseudo Genes (multiple problems)  :: 33 of 331
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5665
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7177430-rid11448693.guided.228"
                     /strain="YA00208201_EQA isolate"
                     /db_xref="taxon:562"
                     /collected_by="A. Smith, National Institute for
                     Communicable Diseases"
     gene            69..284
                     /locus_tag="JQ356_004492"
     CDS             69..284
                     /locus_tag="JQ356_004492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001384468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY4624324.1"
                     /translation="MSIERFQSLATEGKMLSLSWWENEYAVLQWKNHVLHAKAQQEGR
                     ESIFDFYKISIAHITREYSFKKDKDNV"
     gene            277..663
                     /locus_tag="JQ356_004493"
     CDS             277..663
                     /locus_tag="JQ356_004493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid-binding protein"
                     /protein_id="HAY4624325.1"
                     /translation="MFDVHVVLDNQIGQLALLGKTLGNKGIGLEGGGIFTVGDECHAH
                     FLVEQGKEAKIALEQAGLLVLAIRTPLIRKLKQEKPGELGEIARVLAENNINILVQYS
                     DHANQLILITDNDSMAASVTLPWAIK"
     gene            671..1357
                     /locus_tag="JQ356_004494"
     CDS             671..1357
                     /locus_tag="JQ356_004494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY4624326.1"
                     /translation="MANLIRKEVTFESSIAAIGAAMSDISRVKILSALMDGRAWTATE
                     LSSVANISASTASSHLSKLLDCQLITVVAQGKHRYFRLAGKDIAELMESMMGISLNHG
                     VHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQYFHEMG
                     IDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTITEKG
                     YAAFKTHFHI"
     gene            complement(1335..1958)
                     /gene="tetR(B)"
                     /locus_tag="JQ356_004495"
     CDS             complement(1335..1958)
                     /gene="tetR(B)"
                     /locus_tag="JQ356_004495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000088607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(B)"
                     /protein_id="HAY4624327.1"
                     /translation="MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
                     VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLG
                     TRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERET
                     PTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS"
     gene            2040..3245
                     /gene="tet(B)"
                     /locus_tag="JQ356_004496"
     CDS             2040..3245
                     /gene="tet(B)"
                     /locus_tag="JQ356_004496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001089064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(B)"
                     /protein_id="HAY4624328.1"
                     /translation="MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFG
                     VLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRL
                     LSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSP
                     FFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYF
                     SAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKT
                     AVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQGAL
                     QGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQA
                     QGSKQETSA"
     gene            complement(3358..3951)
                     /gene="tetC"
                     /locus_tag="JQ356_004497"
     CDS             complement(3358..3951)
                     /gene="tetC"
                     /locus_tag="JQ356_004497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracyline resistance-associated
                     transcriptional repressor TetC"
                     /protein_id="HAY4624329.1"
                     /translation="MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKAL
                     VTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIID
                     NNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLN
                     GWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK"
     gene            4039..4449
                     /locus_tag="JQ356_004498"
                     /pseudo
     CDS             4039..4449
                     /locus_tag="JQ356_004498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014656611.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(4465..>5665)
                     /locus_tag="JQ356_004499"
     CDS             complement(4465..>5665)
                     /locus_tag="JQ356_004499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001339197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS4-like element ISVsa5 family transposase"
                     /protein_id="HAY4624330.1"
                     /translation="EHKTLSVSWSHYPELHLKRLNSLTLACHALLDCKTLTLTELGRN
                     LPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQK
                     RLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAG
                     FKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTK
                     SNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPK
                     QLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGV
                     HAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTH
                     GYALGKL"
BASE COUNT         1569 a         1045 c         1230 g         1821 t
ORIGIN      
        1 ctgaacataa aacactatca ataagttgga gtcattaccg accactatta agtcatgtag
       61 ctggttttat ttcaattgaa cgttttcaaa gtctagctac agaaggaaaa atgttatcgc
      121 tatcttggtg ggaaaacgaa tacgcagttc tgcaatggaa aaatcatgtt ttacatgcga
      181 aagctcaaca agaagggcga gagtcaatat ttgattttta caaaattagt attgctcata
      241 ttactcgcga atattcattt aaaaaggaca aggataatgt ttgatgttca cgttgtttta
      301 gataatcaaa taggacaatt agcattacta ggaaaaacat taggtaataa aggtattgga
      361 ttggaagggg gagggatatt tacggttggt gatgaatgcc atgctcattt tcttgttgaa
      421 caaggaaagg aagctaaaat agcgctagag caagctggac tgttagtact tgcgatccgg
      481 acaccattaa ttcgtaagtt aaaacaggaa aaaccggggg aacttggcga aatagcacga
      541 gtattggcgg agaataacat taatatttta gtgcaataca gtgaccatgc taaccaactg
      601 atattaataa cggacaatga tagtatggct gcatctgtta cgctcccttg ggcaataaag
      661 tgaacttgcg atggctaatt taatacgaaa agaggttacc tttgagtcct caatagccgc
      721 gataggggcg gctatgtctg acatttcacg agttaaaata ctcagtgctt tgatggatgg
      781 gcgagcttgg acggccactg agctaagttc tgtggcgaat atatcagctt caacggcgag
      841 cagtcattta tctaaattat tagattgcca gctaatcaca gtagtagctc aaggcaagca
      901 tcgttatttt cggctagcag gaaaagatat tgctgaattg atggaaagta tgatggggat
      961 ctccttaaac catggcgtac atgccaaagt ttccacgcca gtgcatttac gaaaagcacg
     1021 tacttgctat gatcatttag ctggcgaagt tgccgttaag atctatgatt ccctttgtca
     1081 acagcaatgg atcactgaaa atggttcaat gatcacatta agtggtattc aatattttca
     1141 tgaaatggga attgacgttc cttccaaaca ttcacgtaaa atctgttgtg cgtgtttaga
     1201 ttggagtgaa cgccgtttcc atttaggtgg gtacgttgga gccgcattat tttcgcttta
     1261 tgaatctaaa gggtggttaa ctcgacatct tggttaccgt gaagttacca tcacggaaaa
     1321 aggttatgct gcttttaaga cccactttca catttaagtt gtttttctaa tccgcatatg
     1381 atcaattcaa ggccgaataa gaaggctggc tctgcacctt ggtgatcaaa taattcgata
     1441 gcttgtcgta ataatggcgg catactatca gtagtaggtg tttccctttc ttctttagcg
     1501 acttgatgct cttgatcttc caatacgcaa cctaaagtaa aatgccccac agcgctgagt
     1561 gcatataatg cattctctag tgaaaaacct tgttggcata aaaaggctaa ttgattttcg
     1621 agagtttcat actgtttttc tgtaggccgt gtacctaaat gtacttttgc tccatcgcga
     1681 tgacttagta aagcacatct aaaactttta gcgttattac gtaaaaaatc ttgccagctt
     1741 tccccttcta aagggcaaaa gtgagtatgg tgcctatcta acatctcaat ggctaaggcg
     1801 tcgagcaaag cccgcttatt ttttacatgc caatacaatg taggctgctc tacacctagc
     1861 ttctgggcga gtttacgggt tgttaaacct tcgattccga cctcattaag cagctctaat
     1921 gcgctgttaa tcactttact tttatctaat ctagacatca ttaattccta atttttgttg
     1981 acactctatc attgatagag ttattttacc actccctatc agtgatagag aaaagtgaaa
     2041 tgaatagttc gacaaagatc gcattggtaa ttacgttact cgatgccatg gggattggcc
     2101 ttatcatgcc agtcttgcca acgttattac gtgaatttat tgcttcggaa gatatcgcta
     2161 accactttgg cgtattgctt gcactttatg cgttaatgca ggttatcttt gctccttggc
     2221 ttggaaaaat gtctgaccga tttggtcggc gcccagtgct gttgttgtca ttaataggcg
     2281 catcgctgga ttacttattg ctggcttttt caagtgcgct ttggatgctg tatttaggcc
     2341 gtttgctttc agggatcaca ggagctactg gggctgtcgc ggcatcggtc attgccgata
     2401 ccacctcagc ttctcaacgc gtgaagtggt tcggttggtt aggggcaagt tttgggcttg
     2461 gtttaatagc ggggcctatt attggtggtt ttgcaggaga gatttcaccg catagtccct
     2521 tttttatcgc tgcgttgcta aatattgtcg ctttccttgt ggttatgttt tggttccgtg
     2581 aaaccaaaaa tacacgtgat aatacagata ccgaagtagg ggttgagacg caatcgaatt
     2641 cggtatacat cactttattt aaaacgatgc ccattttgtt gattatttat ttttcagcgc
     2701 aattgatagg ccaaattccc gcaacggtgt gggtgctatt taccgaaaat cgttttggat
     2761 ggaatagcat gatggttggc ttttcattag cgggtcttgg tcttttacac tcagtattcc
     2821 aagcctttgt ggcaggaaga atagccacta aatggggcga aaaaacggca gtactgctcg
     2881 gatttattgc agatagtagt gcatttgcct ttttagcgtt tatatctgaa ggttggttag
     2941 ttttccctgt tttaatttta ttggctggtg gtgggatcgc tttacctgca ttacagggag
     3001 tgatgtctat ccaaacaaag agtcatcagc aaggtgcttt acagggatta ttggtgagcc
     3061 ttaccaatgc aaccggtgtt attggcccat tactgtttgc tgttatttat aatcattcac
     3121 taccaatttg ggatggctgg atttggatta ttggtttagc gttttactgt attattatcc
     3181 tgctatcgat gaccttcatg ttaacccctc aagctcaggg gagtaaacag gagacaagtg
     3241 cttagttatt tcgtcaccaa atgatgttat tccgcgaaat ataatgaccc tcttgataac
     3301 ccaagagggc attttttacg ataaagaaga tttagcttca aataaaacct atctatttta
     3361 tttatctttc aagctcaata aaaagccgcg gtaaatagca ataaattggc cttttttatc
     3421 ggcaagctct tttaggtttt tcgcatgtat tgcgatatgc ataaaccagc cattgagtaa
     3481 gtttttaagc acatcatcat cataagcttt aagttggttc tcttggatca atttgctgac
     3541 aatggcgttt accttaccag taatgtattc aaggctaatt ttttcaagtt cattccaacc
     3601 aatgataggc atcacttctt ggatagggat aaggttttta ttattatcaa taatataatc
     3661 aagataatgt tcaaatatac tttctaaggc agaccaacca tttgttaaat cagtttttgt
     3721 tgtgatgtag gcatcaatca taattaattg ctgcttataa caggcactga gtaattgttt
     3781 tttattttta aagtgatgat aaaaggcacc tttggtcacc aacgcttttc ccgagatctc
     3841 atctattgaa acagcttgat agcctttttc aacaaacaat attcgtgctg agttaaccag
     3901 tgattgatag gtactcttaa aattttcttg ttgatgattt ttattttcca tgatagattt
     3961 aaaataacat accgtcagta tgtttatggt atcatgatga tgtggtcgtg acaatcttaa
     4021 gaacatttag gttattttat gtatattgaa cagcattctc gctatcaaaa taaagctaat
     4081 aacatccaat taagatatga tgataagcag tttcatacaa cggttatcaa agatgttcta
     4141 ttatggattg aacataattt agatcagtct ttactgcttg atgatgtggc gaataaagcg
     4201 ggttatacca agtggtattt tcagcggctg ttcaaaaaag taacaggggt cacactggct
     4261 agctatattc gtgctcgtcg tttgacgaaa gcggctgttg agttgaggtt gacgaaaaaa
     4321 actatccttg agatcgcatt aaaatatcaa tttgattccc aacaatcttt tacacgtcga
     4381 tttaagtaca tttttaaggt tacaccaagt tattatcggc gtaataaatt atgggaattg
     4441 gaggcaatgc actgagagat cccctcataa tttccccaaa gcgtaaccat gtgtgaataa
     4501 attttgagct agtagggttg cagccacgag taagtcttcc cttgttattg tgtagccaga
     4561 atgccgcaaa acttccatgc ctaagcgaac tgttgagagt acgtttcgat ttctgactgt
     4621 gttagcctgg aagtgcttgt cccaaccttg tttctgagca tgaacgcccg caagccaaca
     4681 tgttagttga agcatcaggg cgattagcag catgatatca aaacgctctg agctgctcgt
     4741 tcggctatgg cgtaggccta gtccgtaggc aggacttttc aagtctcgga aggtttcttc
     4801 aatctgcatt cgcttcgaat agatattaac aagttgtttg ggtgttcgaa tttcaacagg
     4861 taagttagtt gctagaaccc atggctcctt tgccgacgct gagtagattt taggtgacgg
     4921 gtggtgacaa tgagtccgtg tcgagcgctg attttttcgg cctttagagc gagatttata
     4981 caatagaatt tggcatgaga ttggattgct tttagtcagc ctcttatagc ctaaagtctt
     5041 tgagtgacta gatgacatat catgtaagtt gctgataggt ttccagtttt ccgctcctag
     5101 gtctgcatat tgtacttttc ctcttactcg acttaaccag taccaaccca gcttctcaac
     5161 ggatttatac catggcactt taaagccagc atcactgaca atgagcggtg tggtgttact
     5221 cggtagaatg ctcgcaaggt cggctagaaa ttggtcatga gctttctttg aacattgctc
     5281 tgaaagcggg aacgctttct cataaagagt aacagaacga ccgtgtagtg cgactgaagc
     5341 tcgcaatacc ataagtcgtt tttgctcacg aatatcagac cagtcaacaa gtacaatggg
     5401 catcgtattg cccgaacaga taaagctagc atgccaacgg tatacagcga gtcgctcttt
     5461 gtggaggtga cgattaccta acaatcggtc gattcgtttg atgttatgtt ttgttctcgc
     5521 tttggttggc aggttacggc caagttcggt aagagtgaga gttttacagt caagtaatgc
     5581 gtggcaagcc aacgttaagc tgttgagtcg ttttaagtgt aattcggggt aatgactcca
     5641 acttactgat agtgttttat gttca
//
